BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048749
(536 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 323/529 (61%), Positives = 386/529 (72%), Gaps = 24/529 (4%)
Query: 1 MRSRFRQLKRIYREHFQQKFKFHSQLTTQFSKLQSCNSVTSHKTLIPII------NLQAR 54
M SRF+ LK R + Q KFKF + TQ + H L II + Q
Sbjct: 1 MHSRFQMLKLYSRVNTQLKFKF--EFLTQPRR--------KHPILPHIIPNQHFHSTQNP 50
Query: 55 NSEFLFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALN 114
NSEF F E + V +A+ ++ F+R P E A+ VQN+LKT S+ EIE AL+
Sbjct: 51 NSEFNFREGFERDEFVGLVADPGKREVFRRDPDGETALEVQNLLKTYRDSSVSEIEGALH 110
Query: 115 QCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR---EGDYSPGSNVFNAILDVLGRARR 171
QC L+LTDDL+++V+ R+R DW AY FF W SR E YSPG V N ILD+LGR RR
Sbjct: 111 QCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIESGYSPGCGVHNEILDILGRMRR 170
Query: 172 FVELIQVFDEMP---DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
F E+ Q+FDEM LVNE+T+G+LLNRYAAAH EEA+ +F++RK G DL AFQ
Sbjct: 171 FHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTEEAVKIFNKRKGLGFELDLIAFQT 230
Query: 229 LLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
LL+ LCRYKHVE+AE F S+KNEF DIK+MN+ILNGWCVLG++ EAKRFW DII SKC
Sbjct: 231 LLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWCVLGSLREAKRFWNDIITSKC 290
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
+PD TY F+N+LTK GKL TA++LFQAMWEKG PDV CNCIIDALCFKKRIPEALE
Sbjct: 291 KPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALE 350
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
VLREM R C P+V TYNSLIKHLCKI+R E VYE LD+MEQK CLPN T+ YLLKS
Sbjct: 351 VLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQK--GCLPNARTYGYLLKS 408
Query: 409 LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
KKPEEVP +LERMERNGC+M++D YN+ILKLY++W E K+R T +EME+ GMGPDQR+
Sbjct: 409 TKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRT 468
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517
YT+MIHGLYDKGR++DALSYF +M L GMVPEPRT +LVN MNIKLKER
Sbjct: 469 YTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRTTLLVNAMNIKLKER 517
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 323/526 (61%), Positives = 387/526 (73%), Gaps = 18/526 (3%)
Query: 1 MRSRFRQLKRIYREHFQQKFKFHSQLTTQFSKLQSCNSVTSHKTLIP---IINLQARNSE 57
M SRF+ LK R + Q KFKF + TQ + +S+ H LIP + Q NSE
Sbjct: 1 MHSRFQMLKLHSRVNTQLKFKF--EFLTQPRRK---HSILPH--LIPNQHFHSTQNPNSE 53
Query: 58 FLFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCE 117
F F E + V +A+ ++ F+R P E A+ VQN+LKT S+ EIE AL+QC
Sbjct: 54 FNFREGFERDEFVGLVADPGKREVFRRDPDGETALEVQNLLKTYRDSSVSEIEGALHQCR 113
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSR---EGDYSPGSNVFNAILDVLGRARRFVE 174
L+LTDDL+++V+ R+R DW AY FF W SR E YSPG V N ILD+LGR RRF E
Sbjct: 114 LSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGXESGYSPGCGVHNEILDILGRMRRFHE 173
Query: 175 LIQVFDEMP---DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
+ Q+FDEM L NE+T+G+LLNRYAAAH EEA+ +F +RK G DL AFQ LL+
Sbjct: 174 MTQLFDEMSKRKGLXNERTFGVLLNRYAAAHKTEEAVKIFYKRKGLGFELDLIAFQTLLM 233
Query: 232 WLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LCRYKHVE+AE F S+KNEF DIK+MN+ILNGWCVLG++ EAKRFW DII SKC+PD
Sbjct: 234 SLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWCVLGSLREAKRFWNDIITSKCKPD 293
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
TY F+N+LTK GKL TA++LFQAMWEKG PDV CNCIIDALCFKKRIPEALEVLR
Sbjct: 294 KFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLR 353
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
EM R C P+V TYNSLIKHLCKI+R E VYE LD+MEQK CLPN T+ YLLKS KK
Sbjct: 354 EMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQK--GCLPNARTYGYLLKSTKK 411
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
PEEVP +LERMERNGC+M++D YN+ILKLY++W E K+R T +EME+ GMGPDQR+YT+
Sbjct: 412 PEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTI 471
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517
MIHGLYDKGR++DALSYF +M L GMVPEPRT +LVN MNIKLKER
Sbjct: 472 MIHGLYDKGRMDDALSYFKQMTLMGMVPEPRTTLLVNAMNIKLKER 517
>gi|255582957|ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528067|gb|EEF30143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 296/485 (61%), Positives = 365/485 (75%), Gaps = 7/485 (1%)
Query: 46 IPIINLQARN---SEFLFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCS 102
+P+I+ Q R+ +F + + A S EFQ+ P E+A+ VQN+LK
Sbjct: 1 MPLISQQLRSISRKDFCWRSKFYFPTKSLEFAKSHSLIEFQQEPPGELALKVQNVLKNYR 60
Query: 103 VSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAI 162
S +IE AL QC T+T+DLI+ V+ R+R DW+ A FF WVS+ G GS +N I
Sbjct: 61 DSPTRKIELALTQCNPTVTEDLILKVLKRHRSDWKPALIFFNWVSKGGKVLMGSGAYNEI 120
Query: 163 LDVLGRARRFVELIQVFDEMP---DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGE 219
LD+LG+ RRF EL QV D M LVNE+TY +L+NRYAAAH VEEAI +F+ R++ G
Sbjct: 121 LDILGKMRRFDELSQVLDIMSKREGLVNEETYRVLVNRYAAAHKVEEAIEIFNTRRDIGL 180
Query: 220 LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
DL +FQNLL++LCRYKHV++AE+ S+ +FG DIKTMNI+LNGWCVLGNV+EAKRF
Sbjct: 181 EIDLVSFQNLLMFLCRYKHVQIAESLLYSKGKDFGMDIKTMNIVLNGWCVLGNVHEAKRF 240
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
WKDII SKC+PD TY TF+ ALTKKGKLGTAL++++AMWEK KPDVV CNCIIDALCF
Sbjct: 241 WKDIIGSKCKPDLFTYGTFIKALTKKGKLGTALKIYRAMWEKQCKPDVVICNCIIDALCF 300
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
K R+PEALEV REM +GCLPN TYNSLIKH +I+RME VYE LDEM K GSC+P+
Sbjct: 301 KNRVPEALEVFREMSQQGCLPNGATYNSLIKHFSRIRRMEKVYELLDEMLDKKGSCMPDH 360
Query: 400 ITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
ITFNYLLK+LKKPEE+P VLERMERNGC +STDTYN+IL+LY +WDCE++V TW EMEK
Sbjct: 361 ITFNYLLKALKKPEELPLVLERMERNGCMISTDTYNLILRLYADWDCEERVGDTWNEMEK 420
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER-G 518
G+GPD+RSYT+MIH LY+KGR+ DAL YF EM KGMV EPRT +LV+ MN+KLK+
Sbjct: 421 LGLGPDRRSYTIMIHWLYEKGRINDALHYFGEMTSKGMVSEPRTEMLVSSMNMKLKDNDA 480
Query: 519 EQGKK 523
EQG+K
Sbjct: 481 EQGEK 485
>gi|224117122|ref|XP_002317482.1| predicted protein [Populus trichocarpa]
gi|222860547|gb|EEE98094.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 273/410 (66%), Positives = 327/410 (79%), Gaps = 3/410 (0%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
+T DL++ V+ R+R DW+ AY FF WVS+EG S S V+N ILD+LGR RRF EL V
Sbjct: 1 MTQDLVLKVLKRHRSDWKPAYIFFNWVSKEGTISLSSCVYNEILDILGRMRRFEELTLVL 60
Query: 180 DEMP---DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
DEM V+E TY +L+NRYA AHMVEEAIG F++R+E G DL +FQ LL++LCRY
Sbjct: 61 DEMSKREGFVDEDTYRVLVNRYAGAHMVEEAIGAFNKRRELGLELDLVSFQKLLMYLCRY 120
Query: 237 KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
KHV+VAET S+ +EFG DIKTMNI+LNGWCVLGNV EAKRFWKDII SKC+PD TY
Sbjct: 121 KHVDVAETLLHSKGHEFGVDIKTMNIVLNGWCVLGNVREAKRFWKDIIASKCKPDVFTYG 180
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
TF+ ALT KGKLGTA++L++AMW+ KPDVV CNC+IDALCFKKR+PEAL V MK R
Sbjct: 181 TFIKALTNKGKLGTAMKLYEAMWKMQCKPDVVICNCVIDALCFKKRVPEALAVFEGMKER 240
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP 416
GC+PNV TYNSLIKH+CKI RME VYE LDEM++K GSC+P+EITFNYLLKSLKKPEEV
Sbjct: 241 GCIPNVATYNSLIKHMCKIGRMEKVYELLDEMQEKKGSCMPDEITFNYLLKSLKKPEEVA 300
Query: 417 WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
VLERM+ NGCKM+ DT N++LKL+ +WD E+KVR+TWEEMEK G+G D+RSYT+MIH L
Sbjct: 301 GVLERMKINGCKMNNDTCNLLLKLHADWDSEEKVRYTWEEMEKNGLGLDRRSYTIMIHWL 360
Query: 477 YDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK 526
YDKGR+EDAL YF EM KGMVPEPRT IL N MN + ++ E+G+K K
Sbjct: 361 YDKGRVEDALRYFGEMENKGMVPEPRTKILCNSMNTRKQKEAEEGEKSAK 410
>gi|449444202|ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
gi|449502917|ref|XP_004161779.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
Length = 532
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 291/527 (55%), Positives = 380/527 (72%), Gaps = 20/527 (3%)
Query: 1 MRSRFRQLKRIYREHFQQ--KFKFHSQLTTQFSKLQSCNSVTSHKTLI----PIINLQAR 54
M+ +F +L+ I E F KF+F S L +F + TSH+ PI ++ +
Sbjct: 1 MKFKFLRLRNISAEDFHGNFKFRFQSNLVKRFLP----HIPTSHRPFSVVSDPIHHILSC 56
Query: 55 NSEFLFLGRIETAQLVH-SLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKAL 113
++ LV S+A SDE +P D A+ VQN+L +IE+AL
Sbjct: 57 HNLTPSPRNCHDRTLVSDSIAVSDEP--ITVHPDDPSAVYVQNVLYFRRHKPVEDIERAL 114
Query: 114 NQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG----DYSPGSNVFNAILDVLGRA 169
+ C+L LTDD ++ V+ R+R DW A+ FF WV + G ++PGS ++N IL +LG+
Sbjct: 115 SLCDLVLTDDFVLKVLRRHRSDWNPAFIFFNWVLKRGTNEEKFTPGSVIYNEILVILGKF 174
Query: 170 RRFVELIQVFDEMP---DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
RRF E+ +V EM +LVNE+TY +LLNRYAAAH VEEAI +F RR+EFG +L AF
Sbjct: 175 RRFEEVDKVLVEMSKRKELVNEETYSVLLNRYAAAHKVEEAISIFYRRQEFGLEMNLIAF 234
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
Q+LL+WLCRYKHVE AET F S+K+EF DIKT NIILNGWCVLGNV+EAKRFW++II+S
Sbjct: 235 QSLLMWLCRYKHVEAAETLFHSKKHEFVTDIKTSNIILNGWCVLGNVHEAKRFWREIIES 294
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
KCEPD TY T +N+LTKKGKLGTAL+LF+AMWE+G DVV CNCIIDALCFKKRIPEA
Sbjct: 295 KCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVICNCIIDALCFKKRIPEA 354
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
LE+ +EM RGC NV TYN+LIKHLCKI+RME V E L+EME++ GSC PN +TF YLL
Sbjct: 355 LEIFKEMNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFIYLL 414
Query: 407 KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
S++ PEEVP + +RMER+GCKM++D YN+IL+LY++WD +++V+ TW EM++ G+GPD+
Sbjct: 415 GSVRGPEEVPVLFQRMERSGCKMTSDIYNLILRLYMDWDIQERVKSTWNEMKEMGLGPDR 474
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
RSYT+MIHGLY+KGR +D L YF+EM LKG++PEP+T LVN N+K
Sbjct: 475 RSYTIMIHGLYEKGRTKDGLRYFNEMTLKGIMPEPKTEKLVNATNVK 521
>gi|302142966|emb|CBI20261.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 298/530 (56%), Positives = 358/530 (67%), Gaps = 63/530 (11%)
Query: 1 MRSRFRQLKRIYREHFQQKFKFHSQLTTQFSKLQSCNSVTSHKTLIPII------NLQAR 54
M SRF+ LK R + Q KFKF + TQ + H L II + Q
Sbjct: 1 MHSRFQMLKLYSRVNTQLKFKF--EFLTQPRR--------KHPILPHIIPNQHFHSTQNP 50
Query: 55 NSEFLFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALN 114
NSEF F E + V +A+ ++ F+R P E A+ VQN+LKT S+ EIE AL+
Sbjct: 51 NSEFNFREGFERDEFVGLVADPGKREVFRRDPDGETALEVQNLLKTYRDSSVSEIEGALH 110
Query: 115 QCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR---EGDYSPGSNVFNAILDVLGRARR 171
QC L+LTDDL+++V+ R+R DW AY FF W SR E YSPG V N ILD+LGR RR
Sbjct: 111 QCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIESGYSPGCGVHNEILDILGRMRR 170
Query: 172 FVELIQVFDEMP---DLVNEKTYGILLNRYAAAHMVEEA-IGVFDRRKEFGELDDLSAFQ 227
F E+ Q+FDEM LVNE+T+G+LLNRYAAAH EEA + +F +RK
Sbjct: 171 FHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTEEAAVKIFYKRK------------ 218
Query: 228 NLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
G I++MN+ILNGWCVLG++ EAKRFW DII SK
Sbjct: 219 --------------------------GAWIRSMNVILNGWCVLGSLREAKRFWNDIITSK 252
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
C+PD TY F+N+LTK GKL TA++LFQAMWEKG PDV CNCIIDALCFKKRIPEAL
Sbjct: 253 CKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEAL 312
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
EVLREM R C P+V TYNSLIKHLCKI+R E VYE LD+MEQK CLPN T+ YLLK
Sbjct: 313 EVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQK--GCLPNARTYGYLLK 370
Query: 408 SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
S KKPEEVP +LERMERNGC+M++D YN+ILKLY++W E K+R T +EME+ GMGPDQR
Sbjct: 371 STKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQR 430
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517
+YT+MIHGLYDKGR++DALSYF +M L GMVPEPRT +LVN MNIKLKER
Sbjct: 431 TYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRTTLLVNAMNIKLKER 480
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/486 (55%), Positives = 347/486 (71%), Gaps = 18/486 (3%)
Query: 33 LQSCNSVTSHKTLIPIINLQARNSEFLFLGRIETAQLVHSLANSDEKSEFQRYPG--DEI 90
L SV +HK I + S F LG + +HSLA D ++P ++
Sbjct: 25 LVDLRSVPNHKNNITL-------SRFHLLGINQATHFLHSLAAPD------KFPNGFNQS 71
Query: 91 AINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
A++V NI+K S+ EIE+ L++C + LT++L+ V+NR R DW+ AY + + +
Sbjct: 72 AVDVHNIIKHHRGSSPEEIERILDKCGIQLTEELVFEVVNRNRSDWKPAYILSRLIVKHS 131
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGILLNRYAAAHMVEEA 207
Y S V+N ILDVLG+ RRF E QV DEM V+EKTY +LLNRYAAAH V+EA
Sbjct: 132 VYISSSLVYNEILDVLGKMRRFEEFHQVVDEMSKRDGFVDEKTYEVLLNRYAAAHKVDEA 191
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
+GVF+RR+EFG DDL AF LL+WLCRYKHVE AET F S + EFG DI+TMNIILNGW
Sbjct: 192 VGVFERRREFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIRTMNIILNGW 251
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
CVLGNV+EAKR WKDII SKC+PD V+Y T +NALTKKGKLG A+ L++A+WE GR PDV
Sbjct: 252 CVLGNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPDV 311
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
CN +IDALCFKKRIPEALEV +EM +G PNV TYNSL+KHLCKI+R E V+E ++E
Sbjct: 312 KICNNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRRTEKVWELVEE 371
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
ME K GSC PN++TF YLLK ++ ++V VLERM +N C+M++D YN++ +LYV WD E
Sbjct: 372 MEHKGGSCSPNDVTFGYLLKYSQRSKDVDAVLERMAKNKCEMTSDLYNLMFRLYVQWDNE 431
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
+KVR W EME+ G+GPDQR+YT+ IHGL+ KG++ +ALSYF EM KGMVPEPRT +L+
Sbjct: 432 EKVREIWGEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 491
Query: 508 NDMNIK 513
N K
Sbjct: 492 NQNKTK 497
>gi|15232517|ref|NP_188138.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273407|sp|Q9LIL5.1|PP233_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15200
gi|11994509|dbj|BAB02574.1| unnamed protein product [Arabidopsis thaliana]
gi|332642110|gb|AEE75631.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/492 (54%), Positives = 352/492 (71%), Gaps = 13/492 (2%)
Query: 25 QLTTQFSKLQSCNSVTSHKTLIPIINLQARN----SEFLFLGRIETAQLVHSLANSDE-K 79
QL + S+ + +S+ + + P +N S F FLG +HSL D+
Sbjct: 12 QLQSALSR-RRISSLVDFRRVFPPETPNHKNNITLSRFHFLG----THFLHSLGAPDKFP 66
Query: 80 SEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAA 139
+ F + A++V NI+K S+ +I++ L++C + LT++L++ V+NR R DW+ A
Sbjct: 67 NRFNDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPA 126
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLN 196
Y + V ++ + S ++N ILDVLG+ RRF E QVFDEM VNEKTY +LLN
Sbjct: 127 YILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLN 186
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD 256
RYAAAH V+EA+GVF+RRKEFG DDL AF LL+WLCRYKHVE AET F S + EFG D
Sbjct: 187 RYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCD 246
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
IK MN+ILNGWCVLGNV+EAKRFWKDII SKC PD V+Y T +NALTKKGKLG A+ L++
Sbjct: 247 IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYR 306
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
AMW+ R PDV CN +IDALCFKKRIPEALEV RE+ +G PNV TYNSL+KHLCKI+
Sbjct: 307 AMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIR 366
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNV 436
R E V+E ++EME K GSC PN++TF+YLLK ++ ++V VLERM +N C+M++D YN+
Sbjct: 367 RTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNL 426
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ +LYV WD E+KVR W EME+ G+GPDQR+YT+ IHGL+ KG++ +ALSYF EM KG
Sbjct: 427 MFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Query: 497 MVPEPRTGILVN 508
MVPEPRT +L+N
Sbjct: 487 MVPEPRTEMLLN 498
>gi|356546852|ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 481
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/462 (56%), Positives = 331/462 (71%), Gaps = 5/462 (1%)
Query: 68 QLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVN 127
Q + +++ K+ R+ A +QN+LK ++ +AL+QC L DL+++
Sbjct: 13 QGIFQTFSNNVKTSTPRFVHSCPATFIQNLLKFRRDKPTEQLYRALDQCGFDLNHDLVLD 72
Query: 128 VINRYRFDWEAAYTFFKWVSREG-DYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--- 183
V+ R+R DW A+ FF W S+ Y P S+V N I+D+LG+ +RF EL QV DEM
Sbjct: 73 VLRRHRSDWRPAHVFFNWASKTTTGYQPSSDVCNEIVDILGKMQRFQELHQVLDEMSKRE 132
Query: 184 DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE 243
+L++E + L+ R+ AH V+EAI +F RRKEFG + AF+ LL+WLCRYKHVE AE
Sbjct: 133 ELLDEAVFATLVRRFVGAHKVDEAIQLFYRRKEFGLELNSEAFRTLLMWLCRYKHVEDAE 192
Query: 244 TFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
F S K DIK N+ILNGWCVLGN +EAKR W+DI+ S C+PD TYATF+ AL
Sbjct: 193 ALFHNSVKKGLRADIKMWNVILNGWCVLGNSHEAKRVWRDIVASPCKPDIFTYATFIKAL 252
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
TKKGKLGTAL+LF+ MW+KG KPDVV CNCIIDALCFKKRIPEALE+ +M RGC PNV
Sbjct: 253 TKKGKLGTALKLFRGMWDKGGKPDVVICNCIIDALCFKKRIPEALEIFCDMSERGCEPNV 312
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERM 422
TYNSLIK++CKI+RM+ VYE +DEME+K GSCLPN +T+ YLLKSLK+P EV VLERM
Sbjct: 313 ATYNSLIKYMCKIQRMKKVYELVDEMERKKGSCLPNAVTYCYLLKSLKEPGEVCRVLERM 372
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
ERNGC M+ D YN++L+LY+ WD D VR TWEEME+ G GPD+RSYT+MIH ++KGR+
Sbjct: 373 ERNGCGMNDDVYNMVLRLYMKWDDGDGVRKTWEEMERNGWGPDRRSYTIMIHENFEKGRV 432
Query: 483 EDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKV 524
+DA+ Y EM KGMVPE RT LV+ MNI+LK R E+ + V
Sbjct: 433 KDAVRYLEEMISKGMVPERRTEKLVSSMNIRLKGRSEKQEDV 474
>gi|357450985|ref|XP_003595769.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484817|gb|AES66020.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 497
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/527 (47%), Positives = 337/527 (63%), Gaps = 47/527 (8%)
Query: 7 QLKRIYREHFQQKFKFHSQLTTQFSKLQSCNSVTSHKTLIPIINLQARNSEFLFLGRIET 66
Q K ++H K F + T L + TS T RNS +
Sbjct: 2 QTKSNLQQHASNKNTFMQKQQTNSHNLVQQSPNTSEPTFPSSFPQNPRNS---------S 52
Query: 67 AQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIV 126
++ +HS +S + F +QN+LK +IE+ALN + ++L++
Sbjct: 53 SRFLHSHHDSPPLASF-----------IQNLLKFRRDKPTEQIEQALNLIGIHPNNNLVL 101
Query: 127 NVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--- 183
V+ R+R DW+ A+ FFKWVS+ +Y+P V+N I+++LG+ + F EL QV DEM
Sbjct: 102 QVLQRHRSDWKPAFIFFKWVSKTNNYTPSCEVYNEIINILGKMKCFEELHQVLDEMSQRK 161
Query: 184 DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG---ELDDLSAFQNLLLWLCRYKHVE 240
+ +NE+T+ IL+ R+ AAH +EEAI +F RR+EFG ELD AF+ LL+W+CRYKH+E
Sbjct: 162 EFINEETFCILIRRFVAAHKLEEAINIFYRREEFGLDNELDS-KAFRTLLMWMCRYKHIE 220
Query: 241 VAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
AET F N+F + DIKT N+ILNGWCVLGN +EAKR WKDII KC+
Sbjct: 221 EAETLFHRNLNKFRFCRDIKTWNVILNGWCVLGNTHEAKRLWKDIIAYKCK--------- 271
Query: 299 VNALTKKGKLGTALRLFQ-AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
++G + Q + E+ KPDVV NC+ID LCFKKRIPEAL+V +MK R
Sbjct: 272 --------EIGNCFEVVQWDVEEESCKPDVVIFNCLIDGLCFKKRIPEALQVFHDMKERD 323
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW 417
CLPNV TYNSLIKHL KI+RME VYE +++ME+++G CLPN +T++YLL+SLK PEEVP
Sbjct: 324 CLPNVATYNSLIKHLFKIRRMEKVYELVEDMERRSGDCLPNGVTYSYLLQSLKAPEEVPA 383
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
VLERMERNGC MS D N+IL+LY+ WD D +R TW+EME+ G+GPD+RSYT+MIHG Y
Sbjct: 384 VLERMERNGCAMSDDICNLILRLYMKWDDLDGLRKTWDEMERNGLGPDRRSYTIMIHGHY 443
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKV 524
+ GR +DA+ YF EM KG+V EPRT LV MN +LKER E+ + V
Sbjct: 444 ENGRTKDAMRYFQEMTSKGIVLEPRTEKLVISMNGQLKERTEKQEGV 490
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/441 (49%), Positives = 308/441 (69%), Gaps = 8/441 (1%)
Query: 92 INVQNILKTC-SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
++V I+K S E+ + LNQ + +D+++ V+ + R +W+ A +FFKW +
Sbjct: 81 VHVSEIVKILKSRDGDSELAEVLNQFSDEMDEDVVLKVLQKQRSNWKVALSFFKWAAGLP 140
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMP-----DLVNEKTYGILLNRYAAAHMVE 205
Y+ GS + +LD+LGR ++ + Q+FDE+P ++ + + +LLNRYA AH V+
Sbjct: 141 QYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPMESRQSVITNRMFAVLLNRYAGAHKVQ 200
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILN 265
EAI +F +RK++G DL FQ LL+ LCRYKHVE AE F +K+EF IK+ NIILN
Sbjct: 201 EAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILN 260
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
GWCV G++ +AKR W +II SK +PD TY TF+N+LTK GKL TA++LF +MWEKG P
Sbjct: 261 GWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINP 320
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DV CNCIID LCFKKRIPEALE+ EM +RGC +V TYN+LIKH CKI RME VYE L
Sbjct: 321 DVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELL 380
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
D+ME K S PN +T++Y+LK+ +KP++V +++RME++GC++ +DTYN+IL LYV+WD
Sbjct: 381 DDMEVKGVS--PNNMTYSYILKTTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWD 438
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
E V+ W+EME+ G GPDQRS+T+M+HGL+ G+L++AL Y+ M +GM PEPRT +
Sbjct: 439 YEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHGKLDEALHYYRTMESRGMTPEPRTKL 498
Query: 506 LVNDMNIKLKERGEQGKKVIK 526
LV + +K E + + + +
Sbjct: 499 LVKAIRMKKDEPATEEQPLTR 519
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/431 (50%), Positives = 303/431 (70%), Gaps = 8/431 (1%)
Query: 92 INVQNILKTC-SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
++V I+K S E+ + LNQ + +D+++ V+ + R +W+ A +FFKW +
Sbjct: 81 VHVSEIVKILKSRDGDSELAEVLNQFADEMDEDVVLKVLQKQRSNWKVALSFFKWAAGLP 140
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMP-----DLVNEKTYGILLNRYAAAHMVE 205
Y+ GS + +LD+LGR ++ + Q+FDE+P +V + + +LLNRYA AH V+
Sbjct: 141 QYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRYAGAHKVQ 200
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILN 265
EAI +F +RK++G DL FQ LL+ LCRYKHVE AE F +K+EF IK+ NIILN
Sbjct: 201 EAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILN 260
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
GWCV G++ +AKR W +II SK +PD TY TF+N+LTK GKL TA++LF +MWEKG P
Sbjct: 261 GWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINP 320
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DV CNCIID LCFKKRIPEALE+ EM +RGC +V TYN+LIKH CKI RME VYE L
Sbjct: 321 DVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELL 380
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
D+ME K S PN +T++Y+LK+ +KP++V +++RME++GC++ +DTYN+IL LYV+WD
Sbjct: 381 DDMEVKGVS--PNNMTYSYILKTTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWD 438
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
E V+ W+EME+ G GPDQRS+T+M+HGL+ +L++AL Y+ M +GM PEPRT +
Sbjct: 439 YEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGMTPEPRTKL 498
Query: 506 LVNDMNIKLKE 516
LV + +K E
Sbjct: 499 LVKAIRMKKDE 509
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/431 (50%), Positives = 303/431 (70%), Gaps = 8/431 (1%)
Query: 92 INVQNILKTC-SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
++V I+K S E+ + LNQ + +D+++ V+ + R +W+ A +FFKW +
Sbjct: 61 VHVSEIVKILKSRDGDSELAEVLNQFADEMDEDVVLKVLQKQRSNWKVALSFFKWAAGLP 120
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMP-----DLVNEKTYGILLNRYAAAHMVE 205
Y+ GS + +LD+LGR ++ + Q+FDE+P +V + + +LLNRYA AH V+
Sbjct: 121 QYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRYAGAHKVQ 180
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILN 265
EAI +F +RK++G DL FQ LL+ LCRYKHVE AE F +K+EF IK+ NIILN
Sbjct: 181 EAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILN 240
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
GWCV G++ +AKR W +II SK +PD TY TF+N+LTK GKL TA++LF +MWEKG P
Sbjct: 241 GWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINP 300
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DV CNCIID LCFKKRIPEALE+ EM +RGC +V TYN+LIKH CKI RME VYE L
Sbjct: 301 DVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELL 360
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
D+ME K S PN +T++Y+LK+ +KP++V +++RME++GC++ +DTYN+IL LYV+WD
Sbjct: 361 DDMEVKGVS--PNNMTYSYILKTTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWD 418
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
E V+ W+EME+ G GPDQRS+T+M+HGL+ +L++AL Y+ M +GM PEPRT +
Sbjct: 419 YEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGMTPEPRTKL 478
Query: 506 LVNDMNIKLKE 516
LV + +K E
Sbjct: 479 LVKAIRMKKDE 489
>gi|226495005|ref|NP_001148062.1| GTP binding protein [Zea mays]
gi|195615570|gb|ACG29615.1| GTP binding protein [Zea mays]
Length = 535
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/431 (49%), Positives = 302/431 (70%), Gaps = 8/431 (1%)
Query: 88 DEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVS 147
D A V N+LK+ S + ++ L+Q + + +D+I+ V+ + R +W+ A FF W +
Sbjct: 77 DVYASQVLNVLKSTS-ADNADLSGVLHQFMVHMDEDIILMVLQKQRSNWQVALAFFNWAA 135
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-----LVNEKTYGILLNRYAAAH 202
Y+ GS + +LD+LGR ++ + Q+FDE+P+ +V K + +LLNRYA AH
Sbjct: 136 TLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRQVVVTNKMFAVLLNRYAGAH 195
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI 262
V+EAI VF RK++G DL FQ LL+ LCRYKHVE AE F +K+EF + K+ NI
Sbjct: 196 KVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNI 255
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
ILNGWCV G++ +A+R W DII SK E D T+ TF+NAL K G++ A++LF+ MWEKG
Sbjct: 256 ILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVKLFKQMWEKG 315
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDV CNCIID LCFKK+IPEALE+ EM +R C +V TYN+LIK++CKIKRME VY
Sbjct: 316 INPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVY 375
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
E LD+ME K C PN T++Y+LK+ +KP++V +++RMER+GCK+ +D YN+IL LY+
Sbjct: 376 ELLDDMEAK--GCSPNNRTYSYILKTTEKPKDVIALMQRMERSGCKLDSDMYNLILNLYI 433
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
W E ++ W+EME++G GPDQRS+T+M+HGL+ +G+L++AL Y+ M+ +GM+PEPR
Sbjct: 434 KWKYEKGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIPEPR 493
Query: 503 TGILVNDMNIK 513
T IL M++K
Sbjct: 494 TKILAKAMHMK 504
>gi|212274591|ref|NP_001130971.1| GTP binding protein [Zea mays]
gi|194690592|gb|ACF79380.1| unknown [Zea mays]
gi|413947420|gb|AFW80069.1| GTP binding protein [Zea mays]
Length = 535
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/431 (49%), Positives = 301/431 (69%), Gaps = 8/431 (1%)
Query: 88 DEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVS 147
D A V +LK+ S ++ AL+Q + + +D+I+ V+ + R +W+ A FF W +
Sbjct: 77 DVYASQVLKVLKSTSADNT-DLSGALHQFAVHMDEDIILMVLQKQRSNWQVALAFFNWAA 135
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-----LVNEKTYGILLNRYAAAH 202
Y+ GS + +LD+LGR ++ + Q+FDE+P+ +V K + +LLNRYA AH
Sbjct: 136 TLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRQVVVTNKMFAVLLNRYAGAH 195
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI 262
V+EAI VF RK++G DL FQ LL+ LCRYKHVE AE F +K+EF + K+ NI
Sbjct: 196 KVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNI 255
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
ILNGWCV G++ +A+R W DII SK E D T+ TF+NAL K G++ A++LF+ MWEKG
Sbjct: 256 ILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVKLFKQMWEKG 315
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDV CNCIID LCFKK+IPEALE+ EM +R C +V TYN+LIK++CKIKRME VY
Sbjct: 316 INPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVY 375
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
E LD+ME K C PN T++Y+LK+ +KP++V +++RMER GCK+ +D YN+IL LY+
Sbjct: 376 ELLDDMEAK--GCPPNNRTYSYILKTTEKPKDVIALMQRMERTGCKLDSDIYNLILNLYI 433
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
W E ++ W+EME++G GPDQRS+T+M+HGL+ +G+L++AL Y+ M+ +GM+PEPR
Sbjct: 434 KWKYEKGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIPEPR 493
Query: 503 TGILVNDMNIK 513
T ILV M++K
Sbjct: 494 TKILVKAMHMK 504
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/493 (46%), Positives = 327/493 (66%), Gaps = 21/493 (4%)
Query: 30 FSKLQSCNSVT--SHKTLIPIINLQARNSEFLFL-GRIETA-QLVHSLANSDEKSEFQRY 85
F L SC S + ++P L R + G + A +L H+ A+ D +
Sbjct: 26 FGGLGSCTSTVWRNASEVLPDAALPPRFCPTVVPRGYVLGAPRLCHTSASEDSR------ 79
Query: 86 PGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
D V ILK+ T ++ KAL++ + +D+++ V+ + R +W+ A FF W
Sbjct: 80 --DVCIDQVLRILKSSDGDT--DLGKALHRFAGEMDEDVVLRVLQKQRSNWQVALLFFNW 135
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-----LVNEKTYGILLNRYAA 200
+ Y+ G + +LD+LGR ++ + Q+FDE+P+ +V +T+ +LLNRYA
Sbjct: 136 AAGLPAYAHGPRTYTEMLDILGRMKKVKLMTQLFDEIPEERRGLVVTNRTFAVLLNRYAG 195
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM 260
AH V+EAI +F +RK++G DL FQ LL+ LCRYKHVE AE F +K+EF IK+
Sbjct: 196 AHKVQEAIEMFYKRKDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSW 255
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
NIILNGWCV G++ +AKR W II SK +PD TY TF+N+LTK GKL TA++LF +MWE
Sbjct: 256 NIILNGWCVKGSLPDAKRIWNQIIASKLKPDLFTYGTFINSLTKAGKLSTAVKLFTSMWE 315
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KG PDV CNCIID LCFKK+IPEAL++ REM +RGC +V TYN+LIK+ CKI+R E
Sbjct: 316 KGINPDVAICNCIIDQLCFKKKIPEALDIFREMTDRGCQADVATYNTLIKYFCKIRRTEK 375
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
VYE LD+ME N C PN +T++Y+LK+ +KP++V +L+RME++GC++ +DTYN+IL L
Sbjct: 376 VYELLDDME--NKGCSPNNMTYSYILKTTEKPKDVIHLLQRMEKSGCRLDSDTYNLILNL 433
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
YV+ E+ V+ W+EME+ G GPDQRS+T+M+HGL+ +GRL+ AL Y+ M+ +GM PE
Sbjct: 434 YVSMKYENGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGRLDQALQYYTTMKSRGMTPE 493
Query: 501 PRTGILVNDMNIK 513
PRT ILV +++K
Sbjct: 494 PRTRILVKAIHMK 506
>gi|242056423|ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
gi|241929332|gb|EES02477.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
Length = 543
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/431 (49%), Positives = 298/431 (69%), Gaps = 8/431 (1%)
Query: 88 DEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVS 147
D A V +LK+ S + ++ AL + + + +D+I+ V+ + R +W+ A FF W +
Sbjct: 85 DVYASEVLKVLKSTS-ADNADLSDALRRFAVHMDEDIILTVLQKQRSNWQVALAFFNWAA 143
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-----LVNEKTYGILLNRYAAAH 202
Y+ GS + +LD+LGR ++ + Q+FDE+P+ +V K + +LLNRYA AH
Sbjct: 144 TLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRVVVVTNKMFAVLLNRYAGAH 203
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI 262
V+EAI VF RK++G DL FQ LL+ LCRYKHVE AE F +K+EF + K+ NI
Sbjct: 204 KVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNI 263
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
ILNGWCV G++ +A+R W DII SK E D TY TF+NAL K G++ A++LF+ MWE G
Sbjct: 264 ILNGWCVKGSLRDAQRIWNDIIASKVERDLFTYGTFINALAKNGRISAAVKLFKKMWETG 323
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDV CNCIID LCFK RIPEALE+ EM +R C +V TYN+LIK+LCK KRME VY
Sbjct: 324 INPDVAICNCIIDQLCFKNRIPEALEIFGEMNDRLCQADVATYNTLIKYLCKKKRMEKVY 383
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
E LD+ME K C PN T++Y+LK+ +KP++V +++RME+ GC++ +DTYN+IL LY
Sbjct: 384 ELLDDMEAK--GCSPNNRTYSYVLKTTEKPKDVIALMQRMEQTGCELDSDTYNLILNLYT 441
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
NW E V+ W+EME+ G GPDQRS+T+M+HGL+ +G+L++AL Y+ M+ +GM+PEPR
Sbjct: 442 NWKYEKGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIPEPR 501
Query: 503 TGILVNDMNIK 513
T ILV M++K
Sbjct: 502 TKILVKAMHMK 512
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/433 (49%), Positives = 297/433 (68%), Gaps = 8/433 (1%)
Query: 87 GDEIAINVQNILKTC-SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
GD + + V +L+ S ++ K L + +D+++ V+ + R +W+ A FF W
Sbjct: 76 GDSLDVRVGEVLRVLKSCDADADLSKYLCWFADEIDEDVVLKVLQKQRSNWQVALLFFTW 135
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-----LVNEKTYGILLNRYAA 200
+ Y G + +LD+LGR ++ + Q+FDE+P+ +V + + +LLNRYA
Sbjct: 136 AAGLPTYEHGPRTYIEMLDILGRMKKVRLMRQLFDEIPEQRRGLVVTNRMFAVLLNRYAG 195
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM 260
AH V+EAI +F +R ++G DL FQ LL+ LCRYKHVE AE F +K+EF IK+
Sbjct: 196 AHKVQEAIEIFYKRNDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSW 255
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
NIILNGWCV G++ +AKR W +II SK +PD TY TF+NALTK GKL TA++LF +MWE
Sbjct: 256 NIILNGWCVKGSLPDAKRVWNEIIASKLKPDLFTYGTFINALTKAGKLSTAVKLFTSMWE 315
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KG PDV CNCIID LCFKK+IPEAL++ EM +RGC +V TYN+LIKH CKI+R E
Sbjct: 316 KGINPDVAICNCIIDQLCFKKKIPEALKIFGEMNDRGCQADVATYNTLIKHFCKIRRTEK 375
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
VYE LD+ME+K C PN +T+ Y+LK+ +KP +V +++RME +GCK+ +DTYN+IL L
Sbjct: 376 VYELLDDMEKK--GCSPNNMTYTYILKTTEKPRDVMNLIQRMEESGCKLDSDTYNLILNL 433
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
YV+ E V+ WEEME+ G GPDQRS+T+M+HGL+ +G+L+ AL Y+ M+ +GM PE
Sbjct: 434 YVSMKYEKGVQQVWEEMERNGSGPDQRSFTIMVHGLHSQGQLDQALQYYTTMKSRGMTPE 493
Query: 501 PRTGILVNDMNIK 513
PRT ILV ++IK
Sbjct: 494 PRTRILVKAIHIK 506
>gi|356514535|ref|XP_003525961.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 317
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 172/265 (64%), Positives = 211/265 (79%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
DIK N+ILNGWCVLGN++E KR W+DI+ S C+P TYATF+ ALTKKGKLGTAL+LF
Sbjct: 53 DIKMWNVILNGWCVLGNLHETKRVWRDIVASPCKPHIFTYATFIKALTKKGKLGTALKLF 112
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ MW KG KPDVV CNCIIDALCFKKRIP+ALE+ +M RGC PNV TY SLIK++CKI
Sbjct: 113 RGMWGKGGKPDVVICNCIIDALCFKKRIPDALEIFCDMSERGCEPNVATYKSLIKYICKI 172
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYN 435
++ME VYE +DEME+K GSCLP +T+ YLLKSLK+P E+ VLERMERNGC M+ D YN
Sbjct: 173 QQMEKVYELVDEMEKKKGSCLPKVVTYCYLLKSLKEPGEICRVLERMERNGCGMNDDVYN 232
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++L+LY+ WD D VR TW+EME+ G GPD+RSYT+MI ++KGR++DA+ Y EM K
Sbjct: 233 MVLRLYMKWDDGDGVRKTWKEMERNGWGPDRRSYTIMILENFEKGRVKDAVCYLEEMISK 292
Query: 496 GMVPEPRTGILVNDMNIKLKERGEQ 520
GMV EPRT LV+ MNI+LK R E+
Sbjct: 293 GMVLEPRTKKLVSSMNIRLKGRTEK 317
>gi|356506754|ref|XP_003522141.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 258
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/268 (59%), Positives = 197/268 (73%), Gaps = 17/268 (6%)
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+K N+ILNGWCVLGN ++AKR W+DI+ S C+PD TYATF+ ALTK GK
Sbjct: 1 MKMWNVILNGWCVLGNSHKAKRVWRDIVASPCKPDIFTYATFIKALTKGGK--------- 51
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
PDVV CNCIIDALCFKKRIPEAL++ +M RGC PNV TYN LIK++C I+
Sbjct: 52 --------PDVVICNCIIDALCFKKRIPEALKIFCDMSERGCEPNVATYNFLIKYMCNIQ 103
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNV 436
RME VYE +DEME+K GSCLPN +T+ YLLKSLK+ +V VLERMERNGC M+ D YN+
Sbjct: 104 RMEKVYELVDEMERKKGSCLPNAVTYCYLLKSLKESGKVCRVLERMERNGCGMNGDVYNM 163
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+L LY+ WD D VR TWEEME+ G GP++RSYT+MIH ++KGR++DA+ Y EM KG
Sbjct: 164 VLSLYMKWDDGDGVRKTWEEMERNGWGPNRRSYTIMIHENFEKGRVKDAVRYLEEMISKG 223
Query: 497 MVPEPRTGILVNDMNIKLKERGEQGKKV 524
MV EPRT LV+ MNI+LK R ++ + V
Sbjct: 224 MVLEPRTDKLVSSMNIRLKGRTKKHEDV 251
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 84/187 (44%), Gaps = 9/187 (4%)
Query: 141 TFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNR 197
TF K +++ G P + N I+D L +R E +++F +M + N TY L+
Sbjct: 41 TFIKALTKGG--KPDVVICNCIIDALCFKKRIPEALKIFCDMSERGCEPNVATYNFLIKY 98
Query: 198 YAAAHMVEEAIGVFDR--RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+E+ + D RK+ L + + LL L + +V E+N G
Sbjct: 99 MCNIQRMEKVYELVDEMERKKGSCLPNAVTYCYLLKSL--KESGKVCRVLERMERNGCGM 156
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
+ N++L+ + + ++ W+++ ++ P+ +Y ++ +KG++ A+R
Sbjct: 157 NGDVYNMVLSLYMKWDDGDGVRKTWEEMERNGWGPNRRSYTIMIHENFEKGRVKDAVRYL 216
Query: 316 QAMWEKG 322
+ M KG
Sbjct: 217 EEMISKG 223
>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
Length = 485
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 147/415 (35%), Positives = 242/415 (58%), Gaps = 8/415 (1%)
Query: 94 VQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS 153
+ +I + + + ++ L C + ++ +L+V V++R R DWEAA+TFF W ++ Y+
Sbjct: 15 IMDIFRGFRDANRIQVRNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYA 74
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
+++++ +LG+ R+F + DEM LV +T I++ RY A H V +A
Sbjct: 75 HSVREYHSMISILGKMRKFDTAWALIDEMRGGTPGSSLVTPQTLLIMIRRYCAVHDVAKA 134
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
I F K FG L FQ+LL LCRYK+V+ AE K+ F ++ K+ NIILNGW
Sbjct: 135 INTFYAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGW 194
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
CV+G++ + +R WK++ + D+V+YA+ ++ +K L LRLF+ M PD
Sbjct: 195 CVIGSLRDTERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDPDR 254
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
N +I +L + + EA ++++ M+ +G + NV TYNS+IK LCK +R + +E
Sbjct: 255 KVYNAVIHSLAKGRCLKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEE 314
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ Q+ G C P T++ L+ L+ EE+ +L++M GC +TDTY ++++ + W
Sbjct: 315 LLQR-GLC-PTIQTYHAFLRFLRTEEEIFELLKKMRTMGCNPTTDTYIMLIRKFCRWRQL 372
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
D V W EM + G+ PD+ SY V+IHGL+ G+LEDA Y+ EM+ K ++PEP+
Sbjct: 373 DNVSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAHKYYLEMKEKDLLPEPK 427
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 234/402 (58%), Gaps = 9/402 (2%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
E++ + C + ++ +L++ V++R R DWEAA+TFF W R+ YS ++A++ +LG
Sbjct: 113 EMKNKIEHCGVKVSRELVLEVLSRIRNDWEAAFTFFLWAGRQLGYSHSVREYHAMISILG 172
Query: 168 RARRFVELIQVFDEMP------DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
+ R+F + DEM LV +T I++ +Y A H V AI F K F
Sbjct: 173 KMRKFDTAWALIDEMRGVKTGISLVTPQTLLIMIRKYCAVHDVGRAINTFYAHKRFKFDL 232
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC-VLGNVYEAKRFW 280
+ FQ+LL LCRYK+V+ AE K+ F ++ K+ NI+LNGWC V+G+ EA R W
Sbjct: 233 GIDEFQSLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIVLNGWCNVIGSPREADRIW 292
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+++ K + D V+YA+ ++ +K G L +L+ M E G +PD N +I AL
Sbjct: 293 REMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMKEVGIEPDRKIYNSVIFALAKG 352
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
+ + EA+ +++ M+ +G PN TYNSLIK LC+ ++++ DEM Q S P
Sbjct: 353 RHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARKIDEARGLFDEMLQHGHS--PTIR 410
Query: 401 TFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
T++ +SL+ EEV +LE M + GC + DTY ++++ + W D V W ++ +
Sbjct: 411 TYHAFFRSLRTGEEVFALLENMRKLGCHPTIDTYIMLIRKFCRWRQFDDVFKLWNQISEN 470
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
G+GPD+ SY V+IHGL+ G+LE+A ++ +M+ K ++P+P+
Sbjct: 471 GLGPDRSSYIVLIHGLFLNGKLEEAYKFYADMKEKQLLPDPK 512
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 83/219 (37%), Gaps = 16/219 (7%)
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV-----TCNCIIDALCFKKRIPEALEV 349
Y ++ L K K TA L M +G K + T +I C + A+
Sbjct: 164 YHAMISILGKMRKFDTAWALIDEM--RGVKTGISLVTPQTLLIMIRKYCAVHDVGRAINT 221
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP-NEITFNYLLKS 408
K + + SL+ LC+ K ++ + + N P N +FN +L
Sbjct: 222 FYAHKRFKFDLGIDEFQSLLSALCRYKNVQDA----EHLMFCNKDVFPFNTKSFNIVLNG 277
Query: 409 LKKPEEVPWVLERMERNGCKMSTD----TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
P +R+ R CK +Y I+ Y KV + +M++ G+ P
Sbjct: 278 WCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMKEVGIEP 337
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D++ Y +I L + +A++ M KG+ P T
Sbjct: 338 DRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVT 376
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 239/412 (58%), Gaps = 9/412 (2%)
Query: 94 VQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS 153
+ +LK C S + E+ L +C++ +++L+V ++++ R DWE A+TFF W ++ Y
Sbjct: 49 IVKLLKNCG-SDRKELRNKLEECDVKPSNELVVEILSQVRNDWETAFTFFVWAGKQQGYV 107
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAAHMVEEAIG 209
+++++ +LG+ R+F + DEM P LVN +T I++ +Y A H V +AI
Sbjct: 108 RSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAIN 167
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC- 268
F K F + FQ+LL LCRYK+V AE K+ + +D K+ NI+LNGWC
Sbjct: 168 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAEHLIFCNKDTYPFDAKSFNIVLNGWCN 227
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
V+G+ EA+R W ++ + D V+Y++ ++ +K G L L+LF M ++ +PD
Sbjct: 228 VIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKESIEPDRK 287
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKN-RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
N +I AL + EA +++ M+ +G PNV TYNSLIK LCK ++ E + DE
Sbjct: 288 VYNAVIHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVFDE 347
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
M +K P T++ ++ L+ EEV +L +M + GC+ + DTY ++++ W
Sbjct: 348 MLEK--GLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCQPTVDTYIMLIRKLCRWRDF 405
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D V W EM++KG+GPD SY VMIHGL+ G++E+A Y+ EM+ KGM P
Sbjct: 406 DNVLLLWNEMKEKGVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKEKGMRP 457
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+++++ + +++++FD M PD K Y +++ A A V EA +
Sbjct: 254 YSSMISCYSKGGSLNKVLKLFDRMKKESIEPD---RKVYNAVIHALAKASFVSEARNLMK 310
Query: 213 R-RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWCV 269
+E G ++ + +L+ LC+ + E A+ F+ EK F I+T + + +
Sbjct: 311 TMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFP-TIRTYHAFMR---I 366
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
L E + K C+P TY + L + L L+ M EKG PD+ +
Sbjct: 367 LRTGEEVFELLAKMRKMGCQPTVDTYIMLIRKLCRWRDFDNVLLLWNEMKEKGVGPDLSS 426
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+I L +I EA +EMK +G PN
Sbjct: 427 YIVMIHGLFLNGKIEEAYGYYKEMKEKGMRPN 458
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 120/295 (40%), Gaps = 43/295 (14%)
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDI---KTMNIILNGWCVLG 271
K+ G + + + +++ L + + + A T + E +F + +T+ I++ +C +
Sbjct: 102 KQQGYVRSVREYHSMISILGKMRKFDTAWTLID-EMRKFSPSLVNSQTLLIMIRKYCAVH 160
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP-DVVTC 330
+V +A + + K E + + ++AL + + A L K P D +
Sbjct: 161 DVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAEHLI--FCNKDTYPFDAKSF 218
Query: 331 NCIIDALCFKKRIP-EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +++ C P EA V EM N G +V +Y+S+I
Sbjct: 219 NIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMI-------------------- 258
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
SC + N +LK + +RM++ + YN ++ +
Sbjct: 259 ----SCYSKGGSLNKVLK----------LFDRMKKESIEPDRKVYNAVIHALAKASFVSE 304
Query: 450 VRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
R+ + ME+ KGM P+ +Y +I L + E+A F EM KG+ P RT
Sbjct: 305 ARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRT 359
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/440 (35%), Positives = 246/440 (55%), Gaps = 18/440 (4%)
Query: 71 HSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVIN 130
+S N+ E EF R + +IL+ S+ ++ L C + + +L+V V++
Sbjct: 71 NSDTNNGENGEFVR--------RIVDILQEPG-SSMSLVKHKLESCGVAASSELVVEVLS 121
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PD 184
R R WEAA+TFF W +++ Y+ +++++ +LG+ R+F + DEM
Sbjct: 122 RVRNHWEAAFTFFLWAAKQPGYAHSLRAYHSMISILGKMRKFDTAWALIDEMRGGRTGTS 181
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
LV T I++ RY A H V +AI F K+F + FQNLL LCRYK+V+ AE
Sbjct: 182 LVTPHTLSIMIRRYCAVHDVGKAINTFYAHKQFKFGVGIEEFQNLLSALCRYKNVQDAEQ 241
Query: 245 FFESEKNEFGYDIKTMNIILNGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
+N F +D K+ NIILNGWC V+G++ EA+RFW+++ + D V+Y++ ++ +
Sbjct: 242 LLFCNRNVFPFDTKSFNIILNGWCNVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYS 301
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K L L+LF M E PD N ++ AL + EAL +++ M+ +G P+
Sbjct: 302 KVTNLNKVLKLFNQMKEMEIAPDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSV 361
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME 423
TYNSLIK L + +++ E DEM Q+ S P T++ + LK EEV +LE+M+
Sbjct: 362 TYNSLIKPLSRARKINEAKEVFDEMLQRGLS--PTIRTYHAFFRILKSGEEVFMLLEKMK 419
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
GC DTY ++++ + W D V W EM + G+GPD+ SY V+IHGL+ G+LE
Sbjct: 420 ETGCHPDKDTYIMLIRRFCRWRQLDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKLE 479
Query: 484 DALSYFHEMRLKGMVPEPRT 503
+A Y+ EM+ K +PEP+T
Sbjct: 480 EAYKYYIEMKEKQFLPEPKT 499
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 7/199 (3%)
Query: 174 ELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+++++F++M ++ + K Y +++ A A V+EA+ + + G D + +L+
Sbjct: 308 KVLKLFNQMKEMEIAPDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLI 367
Query: 231 LWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
L R + + E E F E + I+T + +L + E + + ++ C
Sbjct: 368 KPLSRARKINEAKEVFDEMLQRGLSPTIRTYHAFFR---ILKSGEEVFMLLEKMKETGCH 424
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD TY + + +L +L+ M E G PD + +I L ++ EA +
Sbjct: 425 PDKDTYIMLIRRFCRWRQLDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKLEEAYKY 484
Query: 350 LREMKNRGCLPNVTTYNSL 368
EMK + LP T + L
Sbjct: 485 YIEMKEKQFLPEPKTEDML 503
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 244/419 (58%), Gaps = 10/419 (2%)
Query: 91 AINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
A + NIL+ S + E++ + QC + ++ +L++ V++R R DWEAA+TFF W +R+
Sbjct: 25 AKTIVNILQE-SCDNRVEMKSKIEQCGIKVSQELVLEVLSRVRNDWEAAFTFFLWAARQP 83
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMP------DLVNEKTYGILLNRYAAAHMV 204
Y+ +++++ +LG+ R+F + DEM LV +T I++ +Y A H V
Sbjct: 84 GYAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTLLIMIRKYCAVHDV 143
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
AI F K F + FQ+LL LCRYK+V+ AE K F + K+ NI+L
Sbjct: 144 GRAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAVFPLNTKSFNIVL 203
Query: 265 NGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
NGWC ++G+ E++R W+++ K D V+YA+ ++ +K G L LRL++ M + G
Sbjct: 204 NGWCNLIGSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGI 263
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+PD N +I AL + + EA +++ M+ +G PN+ TYNSLIK LC+ +++E
Sbjct: 264 EPDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKG 323
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
D+M ++ S P T++ L+ L+ EEV +LE+M + GC+ DTY ++++ +
Sbjct: 324 AFDDMLKRCIS--PTIRTYHAFLRILRTGEEVFALLEKMRKMGCQPINDTYIMLIRKFCR 381
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
W + V W+EM + G+ PD+ SY V+IHGL+ G L+ A Y+ EM+ K ++PEP+
Sbjct: 382 WRQLENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYYTEMKEKQLLPEPK 440
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 239/412 (58%), Gaps = 9/412 (2%)
Query: 94 VQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS 153
+ ++K C S + E+ L +C++ +++L+V +++R R DWE A+TFF W ++ Y
Sbjct: 100 ISKLVKDCG-SDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYV 158
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAAHMVEEAIG 209
+++++ +LG+ R+F + DEM P LVN +T I++ +Y A H V +AI
Sbjct: 159 RSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAIN 218
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC- 268
F K F + FQ+LL LCRYK+V A K+++ +D K+ NI+LNGWC
Sbjct: 219 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCN 278
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
V+G+ EA+R W ++ + D V+Y++ ++ +K G L L+LF M ++ +PD
Sbjct: 279 VIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRK 338
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKN-RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
N ++ AL + EA +++ M+ +G PNV TYNSLIK LCK ++ E + DE
Sbjct: 339 VYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 398
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
M +K P T++ ++ L+ EEV +L +M + GC+ + +TY ++++ W
Sbjct: 399 MLEKG--LFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDF 456
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D V W+EM++K +GPD SY VMIHGL+ G++E+A Y+ EM+ KGM P
Sbjct: 457 DNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRP 508
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+++++ + +++++FD M PD K Y +++ A A V EA +
Sbjct: 305 YSSMISCYSKGGSLNKVLKLFDRMKKECIEPD---RKVYNAVVHALAKASFVSEARNLMK 361
Query: 213 R-RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWCV 269
+E G ++ + +L+ LC+ + E A+ F+ EK F I+T + + +
Sbjct: 362 TMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFP-TIRTYHAFMR---I 417
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
L E + K CEP TY + L + L L+ M EK PD+ +
Sbjct: 418 LRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSS 477
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+I L +I EA +EMK++G PN
Sbjct: 478 YIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 121/295 (41%), Gaps = 43/295 (14%)
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDI---KTMNIILNGWCVLG 271
K+ G + + + +++ L + + + A T + E +F + +T+ I++ +C +
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLID-EMRKFSPSLVNSQTLLIMIRKYCAVH 211
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP-DVVTC 330
+V +A + + K E + + ++AL + + A L K + P D +
Sbjct: 212 DVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSF 269
Query: 331 NCIIDALCFKKRIP-EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +++ C P EA V EM N G +V +Y+S+I
Sbjct: 270 NIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMI-------------------- 309
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
SC + N +LK + +RM++ + YN ++ +
Sbjct: 310 ----SCYSKGGSLNKVLK----------LFDRMKKECIEPDRKVYNAVVHALAKASFVSE 355
Query: 450 VRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
R+ + ME+ KG+ P+ +Y +I L + E+A F EM KG+ P RT
Sbjct: 356 ARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRT 410
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 239/412 (58%), Gaps = 9/412 (2%)
Query: 94 VQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS 153
+ ++K C S + E+ L +C++ +++L+V +++R R DWE A+TFF W ++ Y
Sbjct: 60 ISKLVKDCG-SDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYV 118
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAAHMVEEAIG 209
+++++ +LG+ R+F + DEM P LVN +T I++ +Y A H V +AI
Sbjct: 119 RSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAIN 178
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC- 268
F K F + FQ+LL LCRYK+V A K+++ +D K+ NI+LNGWC
Sbjct: 179 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCN 238
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
V+G+ EA+R W ++ + D V+Y++ ++ +K G L L+LF M ++ +PD
Sbjct: 239 VIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRK 298
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKN-RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
N ++ AL + EA +++ M+ +G PNV TYNSLIK LCK ++ E + DE
Sbjct: 299 VYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 358
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
M +K P T++ ++ L+ EEV +L +M + GC+ + +TY ++++ W
Sbjct: 359 MLEKG--LFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDF 416
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D V W+EM++K +GPD SY VMIHGL+ G++E+A Y+ EM+ KGM P
Sbjct: 417 DNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRP 468
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+++++ + +++++FD M PD K Y +++ A A V EA +
Sbjct: 265 YSSMISCYSKGGSLNKVLKLFDRMKKECIEPD---RKVYNAVVHALAKASFVSEARNLMK 321
Query: 213 R-RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWCV 269
+E G ++ + +L+ LC+ + E A+ F+ EK F I+T + + +
Sbjct: 322 TMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFP-TIRTYHAFMR---I 377
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
L E + K CEP TY + L + L L+ M EK PD+ +
Sbjct: 378 LRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSS 437
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+I L +I EA +EMK++G PN
Sbjct: 438 YIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 469
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 121/295 (41%), Gaps = 43/295 (14%)
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDI---KTMNIILNGWCVLG 271
K+ G + + + +++ L + + + A T + E +F + +T+ I++ +C +
Sbjct: 113 KQQGYVRSVREYHSMISILGKMRKFDTAWTLID-EMRKFSPSLVNSQTLLIMIRKYCAVH 171
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP-DVVTC 330
+V +A + + K E + + ++AL + + A L K + P D +
Sbjct: 172 DVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSF 229
Query: 331 NCIIDALCFKKRIP-EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +++ C P EA V EM N G +V +Y+S+I
Sbjct: 230 NIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMI-------------------- 269
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
SC + N +LK + +RM++ + YN ++ +
Sbjct: 270 ----SCYSKGGSLNKVLK----------LFDRMKKECIEPDRKVYNAVVHALAKASFVSE 315
Query: 450 VRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
R+ + ME+ KG+ P+ +Y +I L + E+A F EM KG+ P RT
Sbjct: 316 ARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRT 370
>gi|356570295|ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 516
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 242/429 (56%), Gaps = 11/429 (2%)
Query: 84 RYPGDEIAINVQNILKTCSVSTKG--EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYT 141
R+ D ++ +V+ IL G + ++ L C + L+ L+V V+ R R DWEAA+T
Sbjct: 22 RFRDDRLSQDVKTILDIMHEMGSGPSQTKQKLEHCSVDLSAKLVVEVLLRTRNDWEAAFT 81
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILL 195
FF W ++ Y+ +++++ +LG+ R+F + +EM P LV +T I++
Sbjct: 82 FFLWAGKQPGYAHSIREYHSMISILGKMRKFDTAWNLIEEMRRGRTGPSLVTPQTLLIMI 141
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+Y A H V AI F K+F L F +LL LCRYK+V+ AE KN F
Sbjct: 142 RKYCAVHDVARAINTFYAYKQFNFQVGLEEFHSLLSALCRYKNVQDAEHLLFCNKNLFPL 201
Query: 256 DIKTMNIILNGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D K+ NIILNGWC ++ + A+R W ++ K + + D V+Y + ++ +K KL LR+
Sbjct: 202 DTKSFNIILNGWCNLIVSTSHAERIWHEMSKRRIQHDVVSYGSIISCYSKSSKLYKVLRM 261
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M ++ PD N +I AL + + EA+ ++ +++ PNV TYNSLIK LCK
Sbjct: 262 FDEMKKRKITPDRKVYNAVIYALAKGRLVKEAVNLIGTLEDNDVTPNVVTYNSLIKPLCK 321
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTY 434
+++ + E+ +++ S P TF+ + L+ EEV +L++M+ GC + +TY
Sbjct: 322 AGKVDEAKQLFYEILKRHLS--PTIQTFHAFFRILRTKEEVFELLDKMKELGCYPTIETY 379
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++++ + W D V W+ M + G+G D+ SY V+IHGL+ G+LE+A +Y+ EM+
Sbjct: 380 IMLMRKFCRWRQLDDVFKMWDAMREDGIGHDRSSYIVLIHGLFLNGKLEEAHTYYAEMQE 439
Query: 495 KGMVPEPRT 503
KG +PEP+T
Sbjct: 440 KGFLPEPKT 448
>gi|357508583|ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 240/425 (56%), Gaps = 11/425 (2%)
Query: 88 DEIAINVQNILKTCSVSTKG--EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
D +V+ IL G EI++ L C + + +L+V V++R R DWEAA+TFF W
Sbjct: 95 DGFVKDVKTILDIIHKPGSGPYEIKQKLEDCNVKASSELVVEVLSRVRNDWEAAFTFFLW 154
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYA 199
++ Y +++++ VLG+ RRF + +EM +V +T I++ +Y
Sbjct: 155 AGKQPGYDHSVREYHSMISVLGKMRRFDTAWALVEEMRRGKTGESIVTPQTLLIMIRKYC 214
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKT 259
A H V AI F K F L FQ LL LCRYK+V+ AE KN F D K+
Sbjct: 215 AVHDVGRAINTFYAFKRFNFQVGLYEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLDTKS 274
Query: 260 MNIILNGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
NIILNGWC ++ + A+R W+++ K + + D V+YA+ ++ +K KL L+LF+ M
Sbjct: 275 FNIILNGWCNLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFEQM 334
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
++ PD N +I +L + + EA+ ++ +M++ P+ TYNSLIK LCK +++
Sbjct: 335 KKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKI 394
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVIL 438
+ E + M ++ S P+ TF+ + L+ EEV +L++M+ GC + +TY +++
Sbjct: 395 DEAKEIFNVMLERGIS--PSIRTFHAFFRILRVKEEVFELLDKMKELGCNPTIETYIMLI 452
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ + W D+V+ W M + G+G D+ SY V+IHGL+ ++E+A Y+ EM+ KG +
Sbjct: 453 RKFCRWRQLDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCKVEEAYKYYIEMQEKGFL 512
Query: 499 PEPRT 503
PEP+T
Sbjct: 513 PEPKT 517
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 13/217 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+ +I+ ++ + ++Q+F++M PD K Y ++ A MV+EA+ +
Sbjct: 311 YASIISCYSKSSKLYRVLQLFEQMKKRNITPD---RKVYNAVIFSLAKNRMVKEAVNLII 367
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLG 271
+ ++ D + +L+ LC+ + ++ A+ F + I+T + V
Sbjct: 368 KMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSIRTFHAFFRILRVKE 427
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
V+E K++ C P TY + + +L R++ AM E G D +
Sbjct: 428 EVFELLDKMKEL---GCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSSYI 484
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
+I L ++ EA + EM+ +G LP T + L
Sbjct: 485 VLIHGLFLNCKVEEAYKYYIEMQEKGFLPEPKTESML 521
>gi|356560394|ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 612
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 238/425 (56%), Gaps = 11/425 (2%)
Query: 88 DEIAINVQNILKTCSVSTKG--EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
D +A +V+ IL G +I++ L C + L+ +L+V V++R R DWEAA+TFF W
Sbjct: 122 DGLAKDVKTILAIMHEVGSGPSQIKQKLEHCSIVLSPELVVEVLSRTRNDWEAAFTFFLW 181
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP------DLVNEKTYGILLNRYA 199
++ Y+ +++++ +LG+ R+F + +EM LV +T I++ +Y
Sbjct: 182 AGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEEMRGGRNGLSLVTPQTLLIMIRKYC 241
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKT 259
A H V AI F K F L F +LL LCRYK+V+ AE K+ F D K+
Sbjct: 242 AVHDVARAINTFYAYKRFNFRVGLEEFHSLLSALCRYKNVQDAEYLLFCNKDVFPLDTKS 301
Query: 260 MNIILNGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
NIILNGWC ++ + A+R W ++IK + + D V+Y + ++ +K KL LR+F M
Sbjct: 302 FNIILNGWCNLIVSTSHAERIWHEMIKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEM 361
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
++ PD N +I AL + + EA+ ++ M+ P+V TYNSLIK LCK ++
Sbjct: 362 KKRKITPDRKVYNAVIYALAKGRLVKEAVNLIGTMEGNDVTPDVVTYNSLIKPLCKAHKV 421
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVIL 438
+ + DEM +++ S P TF+ + L+ EEV +L++M+ C + +TY +++
Sbjct: 422 DEAKQLFDEMLKRHLS--PTIQTFHAFFRILRTKEEVFELLDKMKELRCYPTIETYIMLI 479
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ + W D V W+ M + + D+ SY V+IHGL+ G+LE+A Y+ EM+ KG +
Sbjct: 480 RKFCRWCQLDDVFKIWDAMREDEISHDRSSYIVLIHGLFLNGKLEEAQRYYAEMQEKGFL 539
Query: 499 PEPRT 503
PEP+T
Sbjct: 540 PEPKT 544
>gi|125528152|gb|EAY76266.1| hypothetical protein OsI_04202 [Oryza sativa Indica Group]
Length = 528
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 235/429 (54%), Gaps = 8/429 (1%)
Query: 80 SEFQRYPGDEIAINVQNILKTCSV--STKGEIEKALNQCELTLTDDLIVNVINRYRFDWE 137
++ Q+ P D +A +V+ ++ + L +C T ++ ++V V+ R R
Sbjct: 68 ADLQKLPPD-VARDVEAVVGAAEGFHADAARARGLLERCGATASEPVVVAVLARLRNSCA 126
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILL 195
AA+ F+W S + Y+PG + ++++L +L + RRF + + D+M L + +L+
Sbjct: 127 AAHAAFRWASAQPGYAPGRHAYHSMLAILAKHRRFDDARALLDQMRRSSLASPAAVMLLI 186
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
RY AA V A+ F G ++ F LL LCRYK+V+ AE S + EF +
Sbjct: 187 RRYCAARDVAGAVAAFRALPSLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFPF 246
Query: 256 DIKTMNIILNGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
+ K+ N++LNGWC ++ +V EAKRFW + + D V+Y + ++ +K G L T ++L
Sbjct: 247 ETKSFNVVLNGWCNMVRSVREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKL 306
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M E G PD N ++ AL + + EA ++R M+ +G P+ T+NSLI+ LCK
Sbjct: 307 FNRMKEAGVVPDRKIYNAVVYALAKGRCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCK 366
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTY 434
++++ + LD+M + S P+ TF+ LL + P EV +L++M+ C DT+
Sbjct: 367 ARQVQEARKMLDDMLGRGLS--PSVRTFHALLDVARSPIEVFDLLDKMKELQCDPEMDTF 424
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++++ + W D V W M G+ PD+ +Y V+IHGL+ GRLE++ Y+ EM+
Sbjct: 425 IMLIRKFCRWRQHDSVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESAKYYEEMKA 484
Query: 495 KGMVPEPRT 503
KG PE +T
Sbjct: 485 KGFPPEKKT 493
>gi|297720523|ref|NP_001172623.1| Os01g0816000 [Oryza sativa Japonica Group]
gi|56785065|dbj|BAD82704.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572420|gb|EAZ13935.1| hypothetical protein OsJ_03862 [Oryza sativa Japonica Group]
gi|255673815|dbj|BAH91353.1| Os01g0816000 [Oryza sativa Japonica Group]
Length = 530
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 235/429 (54%), Gaps = 8/429 (1%)
Query: 80 SEFQRYPGDEIAINVQNILKTCSV--STKGEIEKALNQCELTLTDDLIVNVINRYRFDWE 137
++ Q+ P D +A +V+ ++ + L +C T ++ ++V V++R R
Sbjct: 70 ADLQKLPPD-VARDVEAVVGAAEGFHADAARARGLLERCGATASEPVVVAVLDRLRNSCA 128
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILL 195
AA+ F+W S + Y+PG + +++L +L + RRF + + D+M L + +L+
Sbjct: 129 AAHAAFRWASAQPGYAPGRHACHSMLAILAKHRRFDDARALLDQMRRSSLASPAAVMLLI 188
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
RY AA V A+ F G ++ F LL LCRYK+V+ AE S + EF +
Sbjct: 189 RRYCAARDVAGAVAAFRALPNLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFPF 248
Query: 256 DIKTMNIILNGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
+ K+ N++LNGWC ++ +V EAKRFW + + D V+Y + ++ +K G L T ++L
Sbjct: 249 ETKSFNVVLNGWCNMVRSVREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKL 308
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M E G PD N ++ AL + + EA ++R M+ +G P+ T+NSLI+ LCK
Sbjct: 309 FNRMKEAGVIPDRKIYNAVVYALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCK 368
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTY 434
++++ + LD+M + S P+ TF+ LL + P EV +L++M+ C DT+
Sbjct: 369 ARQVQEARKMLDDMLGRGLS--PSVRTFHALLDVARSPIEVFDLLDKMKELQCDPEMDTF 426
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++++ + W D V W M G+ PD+ +Y V+IHGL+ GRLE++ Y+ EM+
Sbjct: 427 IMLIRKFCRWRQHDSVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESAKYYEEMKA 486
Query: 495 KGMVPEPRT 503
KG PE +T
Sbjct: 487 KGFPPEKKT 495
>gi|357131182|ref|XP_003567219.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Brachypodium distachyon]
Length = 518
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 219/399 (54%), Gaps = 5/399 (1%)
Query: 113 LNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF 172
L +C ++ L+V ++R R W AA+ F W + + DY+PG + +++L +L + RRF
Sbjct: 91 LERCGAAASETLVVAALSRLRNSWAAAHAAFLWAAAQPDYAPGRHACHSMLAILAKHRRF 150
Query: 173 VELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+ + DEM L + + +L+ RY AA V AI F FG ++ F LL
Sbjct: 151 DDARALLDEMRRKSLASPRAVLLLVRRYCAARDVTRAIAAFHALPSFGFEPGVAQFHGLL 210
Query: 231 LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC-VLGNVYEAKRFWKDIIKSKCE 289
LCRYK+V+ AE S + EF ++ K+ NI+LNGWC ++ +V EAKRFW + E
Sbjct: 211 SALCRYKNVQDAEHLLLSSEKEFPFETKSFNIVLNGWCNMVCSVREAKRFWTAMEVRGIE 270
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
D +Y + ++ +K G L + L+LF M E G PD N ++ AL + + EA +
Sbjct: 271 RDVASYGSMISCFSKAGSLDSVLKLFNGMKEAGIVPDRKVYNAVVYALAKGRCVDEAKAL 330
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+R M+ RG P+ TYNSLI LCK ++++ + DEM + L + TF+ L
Sbjct: 331 VRSMEERGTPPDTATYNSLIGPLCKARQVQEATQMFDEMIGRG--LLASVRTFHALFDVA 388
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
P EV VL++M+ C+ DTY ++++ + W D V W M G+ PD+ +Y
Sbjct: 389 TSPSEVFDVLDKMKTLHCEPEIDTYIMLIRKFCRWRQHDSVEKLWSAMPTNGLNPDRSAY 448
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVN 508
V+IHGL+ G+LE+A Y+ EM+ KG PE +T ++
Sbjct: 449 IVLIHGLFLNGKLEEAAKYYEEMKAKGFPPEQKTESMIQ 487
>gi|413952128|gb|AFW84777.1| hypothetical protein ZEAMMB73_772209 [Zea mays]
Length = 519
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/407 (33%), Positives = 219/407 (53%), Gaps = 5/407 (1%)
Query: 104 STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAIL 163
S + +AL+ C ++ L+V + R R AA+ F+W + + Y+PG +++L
Sbjct: 84 SNATDAARALDGCGAEASEPLVVASLARLRNSCAAAHAAFRWAAAQPGYAPGRRACHSML 143
Query: 164 DVLGRARRFVELIQVFDEMPDLVNEKTYGILL--NRYAAAHMVEEAIGVFDRRKEFGELD 221
D+L + RRF + DEM +LL R+ AA V A+ F FG
Sbjct: 144 DILAKHRRFDAARALLDEMRRASTASPAAVLLLVRRHCAARDVAGAVAAFRALPSFGFHT 203
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC-VLGNVYEAKRFW 280
+ F LL LCRYK+V+ AE S + EF ++ K+ NI+LNGWC ++ +V EAKRFW
Sbjct: 204 GAAEFHGLLSALCRYKNVQDAENLLISWQKEFPFETKSFNIVLNGWCNIVCSVREAKRFW 263
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+ + D ++Y + ++ +K G L + ++LF M E G PD N I+ AL
Sbjct: 264 SSMERKGIARDVLSYGSMISCFSKAGSLDSVMKLFNRMNEAGVAPDRKVYNAIVFALAKG 323
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
+ + EA ++R M+ + P+ T+NSLI LCK ++ + E D M Q+ S P+
Sbjct: 324 RCVKEAKMLVRSMEEKQVAPDTATFNSLIGPLCKARQFQEAMEMFDAMLQRKLS--PSVR 381
Query: 401 TFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
TF+ LL + EV +L++M++ C+ DTY ++++ + W + V W M
Sbjct: 382 TFHALLNVARNSTEVFDLLDKMKQLRCEPEMDTYIMLIRKFCRWREHESVEKLWSAMPAN 441
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
G+ PD+ +Y V+IHGL+ GRLE+A Y+ EM+ KG +PE +T +V
Sbjct: 442 GLSPDRSAYIVLIHGLFLNGRLEEAARYYEEMKSKGFLPEKKTEEMV 488
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 232/435 (53%), Gaps = 14/435 (3%)
Query: 75 NSDEKSEFQRYPGDEI--AINVQNILKTCSV-----STKGEIEKALNQCELTLTDDLIVN 127
N D K E G++I + + + + C V + +E L++C + L+ DL+++
Sbjct: 41 NEDNKCESGNNDGEKINSSADPVEVDRVCKVIDELFALDRNMEAVLDECGINLSHDLVID 100
Query: 128 VINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDL 185
V+ R+ + A+ FF W + + S +N+++ +L + R+F ++ + +EM +
Sbjct: 101 VLERFCHARKPAFRFFCWAGEKQGFEHDSRTYNSMMSILAKTRQFETVVSMLEEMGGKGV 160
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
+ T+ I + +AAA ++A+ +F+ K++ + +LL L R K + A+
Sbjct: 161 LTMDTFSIAMRAFAAAKERKKAVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQAL 220
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
FE+ K F +++T ++LNGWC + N+ EA W ++I +PD V + + L +
Sbjct: 221 FENLKGRFTPNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRS 280
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
+ A++LF M KG PDV + +I LC + ++ EA+E +EM + GC P+ Y
Sbjct: 281 KQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVY 340
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERM 422
LI KRM+ VY+ L EM+++ C P+ +T+N L+K LK P++ + ++M
Sbjct: 341 TCLITGFGNRKRMDMVYDLLKEMKEE--GCPPDGLTYNALIKLMTRLKMPDDAARIYKKM 398
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
++G + + TYN+I+K Y + R W+EM +KG PD SYTV+I GL +GR
Sbjct: 399 TQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRS 458
Query: 483 EDALSYFHEMRLKGM 497
+A Y EM KGM
Sbjct: 459 GEACKYLEEMLEKGM 473
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 116/294 (39%), Gaps = 52/294 (17%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
+++ + R + EA F + +G ++P + +L+ + + +E V++EM
Sbjct: 204 LLDSLGRAKLGKEAQALF---ENLKGRFTPNLRTYTVLLNGWCKVKNLMEAGSVWNEMID 260
Query: 183 ----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
PD+V + I+L + +AI +F K G D+ ++ L+ +LCR
Sbjct: 261 KGFKPDIV---AHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSK 317
Query: 239 VEVAETFFES-----------------------EKNEFGYDIK-------------TMNI 262
+E A +F+ ++ + YD+ T N
Sbjct: 318 MEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNA 377
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL--TKKGKLGTALRLFQAMWE 320
++ L +A R +K + +S EP TY + + T+ ++G A ++ M
Sbjct: 378 LIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRA--VWDEMSR 435
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
KG PD + +I L + R EA + L EM +G YN L +
Sbjct: 436 KGFCPDDNSYTVLIGGLISQGRSGEACKYLEEMLEKGMKAPQLDYNKFGADLSR 489
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 146/483 (30%), Positives = 244/483 (50%), Gaps = 21/483 (4%)
Query: 33 LQSCNSVTSHKTLIPIINLQARNSE-----FLFLGRIETAQLVHSLANSDEKSEFQRYPG 87
L S S S +L+P +Q + SE F +T + N DE +R
Sbjct: 5 LNSTASNKSKTSLLPSFTIQGKVSELSVRWFSSSSNDDTDSDAENDEN-DESDNCERENK 63
Query: 88 DEIAINVQN---ILKTCSV-----STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAA 139
I + + + K C V + +E L++C + L+ DL++ V+ R+R + A
Sbjct: 64 GAIVKSTADPAEVHKVCKVIDELFALDHNMEAVLDECGINLSHDLVIEVLERFRHARKPA 123
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLNR 197
+ FF W + + + S +++++ +L +AR+F ++ + +EM + L+ T+ I +
Sbjct: 124 FRFFCWAAEKPGFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEKRLLTLDTFSIAMRA 183
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDI 257
+AAA ++A+G+F+ K + LL L R K + A+ F + F ++
Sbjct: 184 FAAAKERKKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGRFTPNL 243
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
+T ++LNGWC + N+ EA R W +++ +PD VT+ + L + K A++ F+
Sbjct: 244 RTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEV 303
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M KG PDV + +I LC + ++ EA+ EM + GC P+ Y L+ KR
Sbjct: 304 MKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKR 363
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTY 434
M+ VYE L EM++K C P+ T+N L+K S + P++ + ++M +NG + S +Y
Sbjct: 364 MDMVYELLKEMKEK--GCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSY 421
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N+I+K Y + W+EM KKG PD SYTV I GL +GR E+A Y EM
Sbjct: 422 NMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIE 481
Query: 495 KGM 497
KGM
Sbjct: 482 KGM 484
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 7/213 (3%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
DS TY + + L K + T + + + M EK R + T + + A K +A+ +
Sbjct: 139 DSRTYHSMMIILAKARQFETMMSMLEEMGEK-RLLTLDTFSIAMRAFAAAKERKKAVGIF 197
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS-- 408
MKN V T N+L+ L + K + ++E G PN T+ LL
Sbjct: 198 ELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLE---GRFTPNLRTYTVLLNGWC 254
Query: 409 -LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+K E + M G K T+N++L+ + +E M+ KG PD R
Sbjct: 255 RVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVR 314
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
SYT++I L + ++++A+ YF+EM G P+
Sbjct: 315 SYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPD 347
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 6/213 (2%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T++ + A + A+ +F+ M + V T N ++D+L K EA + ++
Sbjct: 176 TFSIAMRAFAAAKERKKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKL 235
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---K 410
+ R PN+ TY L+ C++K + +EM + P+ +T N +L+ L K
Sbjct: 236 EGR-FTPNLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFK--PDIVTHNIMLEGLLRSK 292
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
K + E M+ G +Y ++++ + + EM G PD YT
Sbjct: 293 KRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYT 352
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ G + R++ EM+ KG P+ +T
Sbjct: 353 CLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKT 385
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P N +L+ L R+++ + I+ F+ M PD+ ++Y IL+ ++
Sbjct: 274 FKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDV---RSYTILIRDLCKQTKMK 330
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIIL 264
EA+G F + G D + + L+ +K ++ V E E ++ D KT N ++
Sbjct: 331 EAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALI 390
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+A R +K +I++ EP +Y + + + ++ M +KG
Sbjct: 391 KLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFC 450
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD + I L + R EA + L EM +G YN + + + + E
Sbjct: 451 PDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEEL 510
Query: 385 LDEME 389
+M+
Sbjct: 511 AQKMK 515
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 5/190 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A FF+ + +G SP + ++ L + + E + F EM D + Y L+
Sbjct: 297 AIKFFEVMKAKGP-SPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLM 355
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFG 254
Y ++ + KE G D + L+ + + + A ++ +N
Sbjct: 356 TGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIE 415
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
I + N+I+ + + N W ++ K PD +Y F+ L +G+ A +
Sbjct: 416 PSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKY 475
Query: 315 FQAMWEKGRK 324
+ M EKG K
Sbjct: 476 LEEMIEKGMK 485
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 45/201 (22%)
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE-- 414
G + + TY+S++ L K ++ ET+ L+EM +K L TF+ +++ +E
Sbjct: 135 GFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEKRLLTLD---TFSIAMRAFAAAKERK 191
Query: 415 -VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
+ E M+ + ++ +T N +L + + + ++E + P+ R+YTV++
Sbjct: 192 KAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGR-FTPNLRTYTVLL 250
Query: 474 HG------LYDKGRL-----------------------------EDALSYFHEMRLKGMV 498
+G L + GR+ DA+ +F M+ KG
Sbjct: 251 NGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPS 310
Query: 499 PEPRT-GILVNDM--NIKLKE 516
P+ R+ IL+ D+ K+KE
Sbjct: 311 PDVRSYTILIRDLCKQTKMKE 331
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 211/394 (53%), Gaps = 7/394 (1%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E L++C + L+ DL+V+V+ R++ + A+ FF W + ++ S +N ++ VLGR
Sbjct: 191 MEVVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFCWAGKRPGFAHDSRTYNFMMCVLGR 250
Query: 169 ARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
R+F ++ + +EM + L+ +T+ I + +A A ++A+G+FD K++G +
Sbjct: 251 TRQFETMVAMLEEMGEKGLLTMETFSIAIKAFAEAKQRKKAVGIFDLMKKYGFKVGVDVI 310
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
LL L K + A+ FE K+ F ++T I+L+GWC L N+ EA R W ++I
Sbjct: 311 NFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDR 370
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
PD V + + L K K A++LF+ M KG P+V + +I C +K + EA
Sbjct: 371 GFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEA 430
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
+E M +RGC P+ Y LI + K+M+ VY L EM ++ C P+ T+N L+
Sbjct: 431 IEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERG--CPPDGRTYNALI 488
Query: 407 K---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
K S P++ + ++M ++G K + TYN+I+K Y + W+EM +KG
Sbjct: 489 KLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCC 548
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
PD SY V I GL + R +A Y EM KGM
Sbjct: 549 PDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGM 582
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 212/394 (53%), Gaps = 7/394 (1%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E L++C + L+ DL++ V+ R++ + A+ FF W +++ ++ S +N ++ +LG+
Sbjct: 162 MEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGK 221
Query: 169 ARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
R+F ++ + +EM + L+ +T+ + +AAA ++A+GV + K++ +
Sbjct: 222 TRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETI 281
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
LL L R K + A T FE F +++T ++LNGWC + N+ EA + W +I
Sbjct: 282 NCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDE 341
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
+PD V + T + L + K A++LF+ M KG PDV + ++ C + ++ EA
Sbjct: 342 DFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEA 401
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
++ EM+ GC P+ Y LI KRM+TVY L EM K C P+ T+N L+
Sbjct: 402 VQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEM--KANGCPPDGKTYNALI 459
Query: 407 KSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
K + + P++ + ++M NG K +T TY++++K Y + W+EM+ KG
Sbjct: 460 KLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCC 519
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
PD SYTV I GL GR +A Y EM KGM
Sbjct: 520 PDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGM 553
>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 219/419 (52%), Gaps = 12/419 (2%)
Query: 89 EIAINVQNILKTCSV-----STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFF 143
E + N + + + C V + +E L++ +L L+ DLIV V+ R+R + A+ FF
Sbjct: 123 ESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFF 182
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAA 201
W + ++ S +N+++ +L + R+F ++ V +EM L+ +T+ I + +AAA
Sbjct: 183 CWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAA 242
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
++A+G+F+ K++ + LL L R K + A+ F+ K F ++ T
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYT 302
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++LNGWC + N+ EA R W D+I +PD V + + L + K A++LF M K
Sbjct: 303 VLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSK 362
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P+V + +I C + + A+E +M + G P+ Y LI K+++TV
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
YE L EM++K P+ T+N L+K + K PE + +M +N + S T+N+I+
Sbjct: 423 YELLKEMQEKGHP--PDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIM 480
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
K Y + R WEEM KKG+ PD SYTV+I GL +G+ +A Y EM KGM
Sbjct: 481 KSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 127/278 (45%), Gaps = 12/278 (4%)
Query: 233 LCRYKHV-EVAETFF--ESEKNEFGYDIKTMNIILNGWCVLGNV--YEAKRFWKDIIKSK 287
L R++H + A FF +E+ F +D +T N +++ +L +E + + +K
Sbjct: 168 LERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMS---ILAKTRQFETMVSVLEEMGTK 224
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
T+ + A + A+ +F+ M + K V T NC++D+L K EA
Sbjct: 225 GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 284
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRM-ETVYEYLDEMEQK-NGSCLPNEITFNYL 405
+ ++K R PN+ TY L+ C+++ + E + D ++Q + + + L
Sbjct: 285 VLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGL 343
Query: 406 LKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L+S KK + + + M+ G + +Y ++++ + + +++M G+ PD
Sbjct: 344 LRSRKKSDAIK-LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
YT +I G + +L+ EM+ KG P+ +T
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKT 440
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 4/160 (2%)
Query: 176 IQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
I+ FD+M D + Y L+ + ++ + +E G D + L+
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 233 LCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
+ K E A + +NE I T N+I+ + + N + W+++IK PD
Sbjct: 448 MANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPD 507
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+Y + L +GK A R + M +KG K ++ N
Sbjct: 508 DNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 110/278 (39%), Gaps = 59/278 (21%)
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
++S+C+ D T + V + T ++ ++ ++ R + V +D I
Sbjct: 107 VESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLD--LSHDLI 164
Query: 344 PEALEVLREMKN------------RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
E LE R + +G + TYNS++ L K ++ ET+ L+EM K
Sbjct: 165 VEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTK 224
Query: 392 NGSCLPNEITFNYLLKSLKKPEE---VPWVLERMERNGCKMSTDTYNVILK--------- 439
L TF +K+ +E + E M++ K+ +T N +L
Sbjct: 225 G---LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGK 281
Query: 440 ---------------------LYVNWDCEDKVRH------TWEEMEKKGMGPDQRSYTVM 472
+ +N C +VR+ W +M +G+ PD ++ VM
Sbjct: 282 EAQVLFDKLKERFTPNMMTYTVLLNGWC--RVRNLIEAARIWNDMIDQGLKPDIVAHNVM 339
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVND 509
+ GL + DA+ FH M+ KG P R+ I++ D
Sbjct: 340 LEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 13/255 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P N +L+ L R+R+ + I++F M N ++Y I++ + +E AI
Sbjct: 331 PDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEY 390
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCV 269
FD + G D + + L+ K ++ V E E ++ D KT N ++
Sbjct: 391 FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN 450
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE----KGRKP 325
A R + +I+++ EP T+ N + K + + +A+WE KG P
Sbjct: 451 QKMPEHATRIYNKMIQNEIEPSIHTF----NMIMKSYFMARNYEMGRAVWEEMIKKGICP 506
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D + +I L + + EA L EM ++G + YN + + E ++E L
Sbjct: 507 DDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE-IFEEL 565
Query: 386 DEMEQKNGSCLPNEI 400
+ + +G EI
Sbjct: 566 AQRAKFSGKFAAAEI 580
>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80550, mitochondrial; Flags: Precursor
gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 448
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 206/395 (52%), Gaps = 11/395 (2%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
+ + Y DW+ A FF WV RE + + FN ++D+LG+ F + + M
Sbjct: 50 VCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIG 109
Query: 183 --PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV- 239
+ N T+ I+ RY AH+V+EAI +D+ +F L D ++F NL+ LC +KHV
Sbjct: 110 NTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFN-LRDETSFYNLVDALCEHKHVV 168
Query: 240 EVAETFFESEKNEFGYDI---KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
E E F G+ + K N+IL GW LG + K +WK + D +Y+
Sbjct: 169 EAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYS 228
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+++ + K GK A++L++ M + K DVV N +I A+ + + + V REM+ R
Sbjct: 229 IYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRER 288
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP 416
GC PNV T+N++IK LC+ RM Y LDEM ++ C P+ IT+ L L+KP E+
Sbjct: 289 GCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRG--CQPDSITYMCLFSRLEKPSEIL 346
Query: 417 WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
+ RM R+G + DTY ++++ + W V + W+ M++ G PD +Y +I L
Sbjct: 347 SLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDAL 406
Query: 477 YDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
KG L+ A Y EM +G+ P R ++ ++
Sbjct: 407 IQKGMLDMAREYEEEMIERGLSPRRRPELVEKSLD 441
>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 219/419 (52%), Gaps = 12/419 (2%)
Query: 89 EIAINVQNILKTCSV-----STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFF 143
E + N + + + C V + +E L++ +L L+ DLIV V+ R+R + A+ FF
Sbjct: 123 ESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFF 182
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAA 201
W + ++ S +N+++ +L + R+F ++ V +EM L+ +T+ I + +AAA
Sbjct: 183 CWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAA 242
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
++A+G+F+ K++ + LL L R K + A+ F+ K F ++ T
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYT 302
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++LNGWC + N+ EA R W D+I +PD V + + L + K A++LF M K
Sbjct: 303 VLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSK 362
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P+V + +I C + + A+E +M + G P+ Y LI K+++TV
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
YE L EM++K P+ T+N L+K + K PE + +M +N + S T+N+I+
Sbjct: 423 YELLKEMQEKGHP--PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 480
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
K Y + R W+EM KKG+ PD SYTV+I GL +G+ +A Y EM KGM
Sbjct: 481 KSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 6/229 (2%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ + A + A+ +F+ M + K V T NC++D+L K EA + ++
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN--GSCLPNEITFNYLLKSLKK 411
K R PN+ TY L+ C+++ + ++M + + + LL+S+KK
Sbjct: 291 KER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 349
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
+ + + M+ G + +Y ++++ + + +++M G+ PD YT
Sbjct: 350 SDAIK-LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM-NIKLKERG 518
+I G + +L+ EM+ KG P+ +T L+ M N K+ E G
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 457
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 7/212 (3%)
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
S TY + ++ L K + T + + + M KG + T + A K +A+ +
Sbjct: 195 SRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFE 253
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS--- 408
MK V T N L+ L + K + D+++++ PN +T+ LL
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER---FTPNMMTYTVLLNGWCR 310
Query: 409 LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
++ E + M +G K +NV+L+ + + + M+ KG P+ RS
Sbjct: 311 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
YT+MI + +E A+ YF +M G+ P+
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 4/160 (2%)
Query: 176 IQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
I+ FD+M D + Y L+ + ++ + +E G D + L+
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 233 LCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
+ K E + +NE I T N+I+ + V N + W ++IK PD
Sbjct: 448 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 507
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+Y + L +GK A R + M +KG K ++ N
Sbjct: 508 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 45/186 (24%)
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLE 420
TYNS++ L K ++ ET+ L+EM K L TF +K+ +E + E
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKG---LLTMETFTIAMKAFAAAKERKKAVGIFE 253
Query: 421 RMERNGCKMSTDTYNVILK------------------------------LYVNWDCEDKV 450
M++ K+ +T N +L + +N C +V
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWC--RV 311
Query: 451 RH------TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT- 503
R+ W +M G+ PD ++ VM+ GL + DA+ FH M+ KG P R+
Sbjct: 312 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 504 GILVND 509
I++ D
Sbjct: 372 TIMIRD 377
>gi|359487106|ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 571
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 209/380 (55%), Gaps = 9/380 (2%)
Query: 132 YRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF---VELIQVFDEMP-DLVN 187
Y DW+ A FF WV + ++ ++ +N ++D+LG+ F LIQ P N
Sbjct: 188 YANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRMKADPVAYPN 247
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF- 246
T+ + RYAAAH+VEEA+ + R +EF L D +++ NL+ LC YKHV AE F
Sbjct: 248 HVTFRFVFKRYAAAHLVEEAMNAYYRTEEFN-LRDETSYSNLIDALCEYKHVIEAEELFL 306
Query: 247 -ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
ES+ F D+K NIIL GW +G + + FW+++ + +Y+ +++ K
Sbjct: 307 KESKDLVFNDDVKIYNIILRGWFKMGWWKKCREFWEEMDRRGVCKSLYSYSIYMDIQCKS 366
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK A++L++ M +KG + DVV N +I A+ + + ++ V REMK GC PNV TY
Sbjct: 367 GKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTY 426
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERN 425
N++IK LC+ R+ Y D+M +K + PN IT++ ++KP+++ +RM +
Sbjct: 427 NTIIKLLCENGRIREAYGVFDQMREKGYA--PNVITYHCFFGCIEKPKQILRTFDRMINS 484
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G + DTY +++K + W V W++ME++G PD +Y +I L KG ++ A
Sbjct: 485 GVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLA 544
Query: 486 LSYFHEMRLKGMVPEPRTGI 505
Y EM KG+ +PR +
Sbjct: 545 RKYEEEMLAKGLSAKPRVDL 564
>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 407
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 207/395 (52%), Gaps = 11/395 (2%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
+ ++ Y DW+ A FF WV +E + + FN ++D+LG+ F + + M
Sbjct: 10 VCEALSCYINDWQKALEFFNWVEKESGFRHTTETFNRMIDILGKYFEFETCWALINRMIG 69
Query: 183 -PD-LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV- 239
P+ L N T+ I+ RY AH+V+EAI +D+ +F DD S F NL+ LC +KHV
Sbjct: 70 NPESLPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDDTS-FYNLVDALCEHKHVV 128
Query: 240 EVAETFFESEKNEFGYDI---KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
E E F G+ + K N+IL GW LG + K +W + D +Y+
Sbjct: 129 EAEELCFGKNVIAHGFSVSNTKIHNLILRGWSKLGWWGKCKEYWDKMDTEGVPKDLFSYS 188
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+++ + K GK A++L++ M + K DVV N +I A+ + + + V REM+ R
Sbjct: 189 IYMDIMCKSGKPWKAVKLYKEMKSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFREMRER 248
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP 416
GC PNV T+N++IK LC+ RM Y LDEM +K C P+ I++ L L+KP E+
Sbjct: 249 GCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKKG--CQPDSISYMCLFSRLEKPSEIL 306
Query: 417 WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
+ RM R+G + DTY ++++ + W V + W+ M++ G PD +Y +I L
Sbjct: 307 SLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDAL 366
Query: 477 YDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
KG L+ A Y EM +G+ P R ++ ++
Sbjct: 367 IQKGMLDMAREYEEEMIERGLSPRRRPELVEKSLD 401
>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 219/419 (52%), Gaps = 12/419 (2%)
Query: 89 EIAINVQNILKTCSV-----STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFF 143
E + N + + + C V + +E L++ +L L+ DLIV V+ R+R + A+ FF
Sbjct: 122 ESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFF 181
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAA 201
W + ++ S +N+++ +L + R+F ++ V +EM L+ +T+ I + +AAA
Sbjct: 182 CWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAA 241
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
++A+G+F+ K++ + LL L R K + A+ F+ K F ++ T
Sbjct: 242 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYT 301
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++LNGWC + N+ EA R W D+I +PD V + + L + K A++LF M K
Sbjct: 302 VLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSK 361
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P+V + +I C + + A+E +M + G P+ Y LI K+++TV
Sbjct: 362 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 421
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
YE L EM++K P+ T+N L+K + K PE + +M +N + S T+N+I+
Sbjct: 422 YELLKEMQEKGHP--PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 479
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
K Y + R W+EM KKG+ PD SYTV+I GL +G+ +A Y EM KGM
Sbjct: 480 KSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 133/295 (45%), Gaps = 14/295 (4%)
Query: 233 LCRYKHV-EVAETFF--ESEKNEFGYDIKTMNIILNGWCVLGNV--YEAKRFWKDIIKSK 287
L R++H + A FF +E+ F +D +T N +++ +L +E + + +K
Sbjct: 167 LERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMS---ILAKTRQFETMVSVLEEMGTK 223
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
T+ + A + A+ +F+ M + K V T NC++D+L K EA
Sbjct: 224 GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 283
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN--GSCLPNEITFNYL 405
+ ++K R PN+ TY L+ C+++ + ++M + + + L
Sbjct: 284 VLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 342
Query: 406 LKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L+S+KK + + + M+ G + +Y ++++ + + +++M G+ PD
Sbjct: 343 LRSMKKSDAIK-LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 401
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM-NIKLKERG 518
YT +I G + +L+ EM+ KG P+ +T L+ M N K+ E G
Sbjct: 402 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 456
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 4/160 (2%)
Query: 176 IQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
I+ FD+M D + Y L+ + ++ + +E G D + L+
Sbjct: 387 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 446
Query: 233 LCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
+ K E + +NE I T N+I+ + V N + W ++IK PD
Sbjct: 447 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 506
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+Y + L +GK A R + M +KG K ++ N
Sbjct: 507 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 628
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 218/417 (52%), Gaps = 12/417 (2%)
Query: 91 AINVQNILKTCSV-----STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
+ N + + + C V + +E L++ ++ L+ DLIV V+ R+R + A+ FF W
Sbjct: 134 STNPEEVERVCKVIDELFALDRNMEAVLDEMKVELSHDLIVKVLERFRHARKPAFRFFCW 193
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHM 203
+ + ++ S +N+++ +L + R+F ++ V +EM L+ +T+ I + +AAA
Sbjct: 194 AAEKQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKE 253
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNII 263
++A+G+F+ K++ + LL L R K + A+ F+ K F ++ T ++
Sbjct: 254 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVL 313
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
LNGWC + N+ EA R W D+I +PD V + + L + K A++LF M KG
Sbjct: 314 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGP 373
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P+V + +I C + + A+E +M + G P+ Y LI K+++TVYE
Sbjct: 374 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 433
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
L EM++K P+ T+N L+K + K PE + +M +N + S T+N+I+K
Sbjct: 434 LLKEMQEKGHP--PDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKS 491
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
Y + W+EM KKG+ PD SYTV+I GL +G+ +A Y EM KGM
Sbjct: 492 YFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 548
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 127/278 (45%), Gaps = 12/278 (4%)
Query: 233 LCRYKHV-EVAETFF--ESEKNEFGYDIKTMNIILNGWCVLGNV--YEAKRFWKDIIKSK 287
L R++H + A FF +EK F +D +T N +++ +L +E + + +K
Sbjct: 177 LERFRHARKPAFRFFCWAAEKQGFAHDSRTYNSMMS---ILAKTRQFETMVSVLEEMGTK 233
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
T+ + A + A+ +F+ M + K V T NC++D+L K EA
Sbjct: 234 GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 293
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRM-ETVYEYLDEMEQK-NGSCLPNEITFNYL 405
+ ++K R PN+ TY L+ C+++ + E + D ++Q + + + L
Sbjct: 294 VLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGL 352
Query: 406 LKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L+S KK + + + M+ G + +Y ++++ + + +++M G+ PD
Sbjct: 353 LRSRKKSDAIK-LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 411
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
YT +I G + +L+ EM+ KG P+ +T
Sbjct: 412 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKT 449
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 311 ALRLFQAMWEK-GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A R F EK G D T N ++ L ++ + VL EM +G L + T+ +
Sbjct: 187 AFRFFCWAAEKQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAM 245
Query: 370 KHLCKIK---RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERM- 422
K K + ++E + + + K G T N LL SL + + E + +++
Sbjct: 246 KAFAAAKERKKAVGIFELMKKYKFKIGV-----ETINCLLDSLGRAKLGKEAQVLFDKLK 300
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
ER M T Y V+L + + W +M +G+ PD ++ VM+ GL +
Sbjct: 301 ERFTPNMMT--YTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKK 358
Query: 483 EDALSYFHEMRLKGMVPEPRT-GILVND 509
DA+ FH M+ KG P R+ I++ D
Sbjct: 359 SDAIKLFHVMKSKGPCPNVRSYTIMIRD 386
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 9/253 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P N +L+ L R+R+ + I++F M N ++Y I++ + +E AI
Sbjct: 340 PDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEY 399
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCV 269
FD + G D + + L+ K ++ V E E ++ D KT N ++
Sbjct: 400 FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN 459
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA--LTKKGKLGTALRLFQAMWEKGRKPDV 327
A R + +I+++ EP T+ + + + + ++G+A ++ M +KG PD
Sbjct: 460 QKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGSA--VWDEMIKKGICPDD 517
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I L + + EA L EM ++G + YN K + E ++E L +
Sbjct: 518 NSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHKGGQPE-IFEELAQ 576
Query: 388 MEQKNGSCLPNEI 400
+ +G EI
Sbjct: 577 RAKFSGKFAAAEI 589
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 226/424 (53%), Gaps = 16/424 (3%)
Query: 88 DEIAINV----QNILKTCSV-----STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEA 138
DE+ +N + + + C V + +E L++C + L+ L+V V+ R++ +
Sbjct: 192 DEVNVNSGADPEEVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKP 251
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLN 196
A+ FF W ++ ++ S +NA++ VLGR R+F ++ + EM + L+ +T+ I +
Sbjct: 252 AFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLLTMETFSIAIK 311
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD 256
+AAA ++A+GVF+ K + + LL L R K + A+ FE ++ F +
Sbjct: 312 AFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPN 371
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
++T ++LNGWC + N+ EA R W ++I +PD + + T + L K K A++LF+
Sbjct: 372 LRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFE 431
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M KG P+V T +I LC + ++ EA+E EM + GC P+ Y LI K
Sbjct: 432 VMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQK 491
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDT 433
+M+ VY L EM++K C + T+N L+K + + P++ + ++M +NG + + T
Sbjct: 492 KMDKVYALLKEMKEK--GCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHT 549
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
YN+++K Y + WEEM +KG PD SY V I GL GR E+A Y EM
Sbjct: 550 YNMMMKSYFYTRNYEMGCAVWEEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMI 609
Query: 494 LKGM 497
KGM
Sbjct: 610 EKGM 613
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 90/224 (40%), Gaps = 7/224 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A F+ + +G SP + ++ L + + E ++ FDEM D + Y L+
Sbjct: 426 AIKLFEVMKAKGP-SPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLI 484
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL-LWLCRYKHVEVAETFFESEKNEFG 254
+ +++ + KE G D + L+ L R + + + +N
Sbjct: 485 TGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQ 544
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
+ T N+++ + N W+++ + C PD +Y F+ L + G+ A R
Sbjct: 545 STLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRY 604
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL-REMKNRG 357
+ M EKG K + N + P+ LE L R+MK G
Sbjct: 605 LEEMIEKGMKAPQLDYNKFAADFSRAGK-PDILEELARKMKFEG 647
>gi|242054767|ref|XP_002456529.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
gi|241928504|gb|EES01649.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
Length = 517
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 216/394 (54%), Gaps = 5/394 (1%)
Query: 113 LNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF 172
L+ C ++ L+V ++R R AA+ F+W + + Y+PG +++L +L + RRF
Sbjct: 94 LDGCGAEASEPLVVAALSRLRNSCAAAHAAFRWAAAQPGYAPGRRACHSMLAILAKHRRF 153
Query: 173 VELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+ DEM + + +L+ R+ AA V A+ F FG ++ F LL
Sbjct: 154 DAARALLDEMRRASMASPAAVLLLVRRHCAARDVAAAVAAFRALPSFGFDTGVAEFHGLL 213
Query: 231 LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC-VLGNVYEAKRFWKDIIKSKCE 289
LCRYK+V+ AE S + EF ++ K+ NI+LNGWC ++ ++ EAKRFW + + +
Sbjct: 214 SALCRYKNVQDAEHLLISCEKEFPFETKSFNIVLNGWCNIVCSLREAKRFWSSMERKGID 273
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
D V+Y + ++ +K G L + ++LF M E G PD N I+ AL + + A +
Sbjct: 274 RDVVSYGSMISCFSKAGSLHSVMKLFNHMNEAGVAPDRKVYNAIVFALAKGRCVKAAKML 333
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+R M+ + P+ T+NSLI LCK ++++ E D M ++ S P+ TF+ LL
Sbjct: 334 VRTMEEKQVAPDTATFNSLIGPLCKARQVQEAMEMFDAMLERGLS--PSVRTFHALLNVA 391
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+ EV +L++M++ C+ DTY ++++ + W + V W M G+ PD+ +Y
Sbjct: 392 RNSTEVFDLLDKMKQLQCEPEMDTYIMLIRKFCRWRQHESVEKLWSAMPANGLSPDRSAY 451
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
V+IHGL+ GRLE+A Y+ EM+ KG PE +T
Sbjct: 452 IVLIHGLFLNGRLEEAAKYYGEMKSKGFSPEKKT 485
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 248/494 (50%), Gaps = 25/494 (5%)
Query: 43 KTLIP---IINLQARNSEFLFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILK 99
K +IP I ++Q +S L I+TAQ V E+ + Y I V IL+
Sbjct: 49 KWVIPKTQIKSIQITDSRILV---IKTAQSV------KEEEDLDLYAWKAIEKTVYRILR 99
Query: 100 TCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVF 159
S ++E AL + + + L V+NR Y FF W S++ Y V+
Sbjct: 100 KFH-SRVPKLELALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVY 158
Query: 160 NAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
A++ +LG+ R+F + + +EM P V+ + +L+ R+A+A MV++AI V D
Sbjct: 159 KAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMP 218
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
++G D F LL LC+ V+ A + FE + F +K +L GWC G + E
Sbjct: 219 KYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLME 278
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
AK I ++ EPD V Y + GK+ A L + M K +P+V++ +I
Sbjct: 279 AKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQ 338
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
ALC KK++ EA+ V EM++ GC + TY +LI CK ++ YE LD M Q+
Sbjct: 339 ALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGH-- 396
Query: 396 LPNEITFNYLLKSLKKPEEVPWVLERME---RNGCKMSTDTYNVILKLYVNW-DCEDKVR 451
+PN +T+ +++ + +K EE+ +E ME + GC + YN++++L + ++ VR
Sbjct: 397 IPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVR 456
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
W EME G+ P ++ +MIHG + L +A +F EM +G++ P+ G L +N
Sbjct: 457 -VWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLN 515
Query: 512 IKLK-ERGEQGKKV 524
L+ E+ E K V
Sbjct: 516 SLLRAEKLEMSKDV 529
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 226/424 (53%), Gaps = 16/424 (3%)
Query: 88 DEIAINV----QNILKTCSV-----STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEA 138
DE+ +N + + + C V + +E L++C + L+ L+V V+ R++ +
Sbjct: 192 DEVNVNSGADPEEVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKP 251
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLN 196
A+ FF W ++ ++ S +NA++ VLGR R+F ++ + EM + L+ +T+ I +
Sbjct: 252 AFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLLTMETFSIAIK 311
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD 256
+AAA ++A+GVF+ K + + LL L R K + A+ FE ++ F +
Sbjct: 312 AFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPN 371
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
++T ++LNGWC + N+ EA R W ++I +PD + + T + L K K A++LF+
Sbjct: 372 LRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFE 431
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M KG P+V T +I LC + ++ EA+E EM + GC P+ Y LI K
Sbjct: 432 VMKAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQK 491
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDT 433
+M+ VY L EM++K C + T+N L+K + + P++ + ++M +NG + + T
Sbjct: 492 KMDKVYALLKEMKEK--GCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHT 549
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
YN+++K Y + W+EM +KG PD SY V I GL GR E+A Y EM
Sbjct: 550 YNMMMKSYFYTRNYEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMI 609
Query: 494 LKGM 497
KGM
Sbjct: 610 EKGM 613
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 90/224 (40%), Gaps = 7/224 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A F+ + +G SP + ++ L + + E ++ FDEM D + Y L+
Sbjct: 426 AIKLFEVMKAKGP-SPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLI 484
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL-LWLCRYKHVEVAETFFESEKNEFG 254
+ +++ + KE G D + L+ L R + + + +N
Sbjct: 485 TGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQ 544
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
+ T N+++ + N WK++ + C PD +Y F+ L + G+ A R
Sbjct: 545 PTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRY 604
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL-REMKNRG 357
+ M EKG K + N + P+ LE L R+MK G
Sbjct: 605 LEEMIEKGMKAPQLDYNKFAADFSRAGK-PDILEELARKMKFEG 647
>gi|449491189|ref|XP_004158824.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Cucumis sativus]
Length = 450
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 212/390 (54%), Gaps = 9/390 (2%)
Query: 128 VINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF---VELIQVFDEMPD 184
++ Y DW+ +Y FF WV E + + +N +LD+LG+ F LI + P
Sbjct: 53 ALDSYCNDWKRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQSPS 112
Query: 185 LV-NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE 243
+ T+ IL RYA AH+V EAI ++R +EF +L D ++F NL+ LC +HV+ A+
Sbjct: 113 ASPDHATFRILFKRYALAHLVSEAIAAYERLREF-KLRDETSFCNLIDALCESRHVDEAQ 171
Query: 244 --TFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
F ++ K + K N+IL GW +G + + FW+++ K D +Y+ +++
Sbjct: 172 ELCFGKNRKLDCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDI 231
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K GK A++L++ M +KG K DVV N +I A+ + + A V EMK GC PN
Sbjct: 232 QCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPN 291
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER 421
V T N++IK C+ R + + LD+M +++ C PN IT++ +SL+KP+E+ + +R
Sbjct: 292 VVTCNTVIKLFCENGRFKDAHMMLDQMLKRD--CQPNVITYHCFFRSLEKPKEILVLFDR 349
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M + G DTY ++L+ + W V W +ME+ G P++ +Y +I L +KG
Sbjct: 350 MIKYGVHPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGM 409
Query: 482 LEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
++ A Y EM KG+ P+ R + MN
Sbjct: 410 IDMARKYDEEMVAKGLSPKLRVELGTQMMN 439
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/448 (30%), Positives = 230/448 (51%), Gaps = 14/448 (3%)
Query: 88 DEIAINVQNILKTCSV--STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
DE + +V+ + + S ++E AL + + + L V+NR Y FF W
Sbjct: 52 DEFSADVEKVYRILRKFHSRVPKLELALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVW 111
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAA 201
S++ Y V+ A++ +LG+ R+F + + +EM P V+ + +L+ R+A+A
Sbjct: 112 ASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASA 171
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
MV++AI V D ++G D F LL LC+ V+ A + FE + F +K
Sbjct: 172 RMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFT 231
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+L GWC G + EAK I ++ EPD V Y + GK+ A L + M K
Sbjct: 232 SLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRK 291
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
+P+V++ +I ALC KK++ EA+ V EM++ GC + TY +LI CK ++
Sbjct: 292 ECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKG 351
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME---RNGCKMSTDTYNVIL 438
YE LD M Q+ +PN +T+ +++ + +K EE+ +E ME + GC + YN+++
Sbjct: 352 YELLDNMIQQGH--IPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVI 409
Query: 439 KLYVNW-DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+L + ++ VR W EME G+ P ++ +MIHG + L +A +F EM +G+
Sbjct: 410 RLACKLGEIKEGVR-VWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGL 468
Query: 498 VPEPRTGILVNDMNIKLK-ERGEQGKKV 524
+ P+ G L +N L+ E+ E K V
Sbjct: 469 LSAPQYGTLKELLNSLLRAEKLEMSKDV 496
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 207/394 (52%), Gaps = 7/394 (1%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E L++C + L+ DL+V+V+ R++ + A+ FF + ++ S +N ++ VLGR
Sbjct: 53 MEVVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFCXAGKRPGFAHDSRTYNFMMCVLGR 112
Query: 169 ARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
R+F ++ +EM + L+ +T+ I + +A A ++ +G+FD K++G +
Sbjct: 113 TRQFETMVAKLEEMGEKGLLTMETFSIAIKAFAEAKQRKKEVGIFDLMKKYGFKVGVDVI 172
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
LL L K + A+ FE K+ F ++T I+L+GWC L N+ EA R W ++I
Sbjct: 173 NFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDR 232
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
PD V + + L K K A++LF+ M KG P+V + +I C +K + EA
Sbjct: 233 GFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEA 292
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
+E M +RGC P+ Y LI + K+M+ VY L EM ++ C P+ T+N L+
Sbjct: 293 IEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERG--CPPDGRTYNALI 350
Query: 407 K---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
K S P++ + ++M ++G K + TYN+I+K Y + W+EM KG
Sbjct: 351 KLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHPKGCC 410
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
PD SY V I GL + R +A Y EM KGM
Sbjct: 411 PDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGM 444
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 143/345 (41%), Gaps = 29/345 (8%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM 182
+ +++ ++ + EA F K R ++P + +L R + +E +V++EM
Sbjct: 173 NFLLDSLSTAKLGKEAQAVFEKLKDR---FTPSLQTYTILLSGWCRLKNLLEAGRVWNEM 229
Query: 183 ------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
PD+V + ++L +AI +F+ K G ++ ++ ++ C+
Sbjct: 230 IDRGFNPDIV---AHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQ 286
Query: 237 KHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
K + A +F+ + D ++ G+ + K++ + C PD TY
Sbjct: 287 KLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTY 346
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+ +T + A+R+++ M + G KP + T N I+ + K E+ EM
Sbjct: 347 NALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHP 406
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
+GC P+ +Y I L + R +YL+EM +K L ++ +N + K
Sbjct: 407 KGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKAL--KLDYNKFASDISKTGNA 464
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
+LE + R N + K V+ V +W +M KK
Sbjct: 465 -VILEELARK--------MNFVGKFEVS-----NVLASWADMMKK 495
>gi|224081867|ref|XP_002306508.1| predicted protein [Populus trichocarpa]
gi|222855957|gb|EEE93504.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 213/394 (54%), Gaps = 11/394 (2%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF---VE 174
L L + ++ Y DW+ A FF WV E + + +N ++D+LG+ F +
Sbjct: 42 LNLDSSTVFQTLSCYNNDWKRALDFFNWVETESQFQHTTETYNRMIDILGKFFEFDLSWD 101
Query: 175 LIQVFDEMP-DLVNEKTYGILLNRYAAAHMVEEAIGVF-DRRKEFGELDDLSAFQNLLLW 232
LIQ P N T+ +L +RY +AH+V EA+ V+ DR KEFG L D +++ L+
Sbjct: 102 LIQRMRNNPFSTPNHTTFRVLFHRYISAHLVNEAVSVYEDRLKEFG-LKDETSYCILVDA 160
Query: 233 LCRYKHV-EVAETFFESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
LC YKHV E E F + N K N+IL GW +G + + FW+++ + +
Sbjct: 161 LCEYKHVIEAHELCFGNNNNSINVRNITKIYNMILRGWFKMGWWGKCREFWEEMDRKEVC 220
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
D +Y+ +++ L K GK A++L++ M KG K DVV N +I+A+ + + L V
Sbjct: 221 KDLHSYSIYMDILCKSGKPWKAVKLYKEMKSKGIKLDVVAYNTVINAIGLSEGVDFVLRV 280
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
REM+ GC PNV T N++IK LC+ R++ Y+ LDEM Q + P+ T++ + L
Sbjct: 281 YREMRELGCQPNVVTCNTVIKLLCENGRIKEAYKMLDEMPQSYIA--PDVFTYHCFFRCL 338
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+KP+E+ + ++M NG DTY ++++ + W V W++MEK G PD+ +Y
Sbjct: 339 EKPKEILCLFDQMIENGVCPRMDTYVMLMRKFGRWGFLRPVFLVWKKMEKLGCSPDEFAY 398
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+I L KG ++ A Y EM KG+ +PR
Sbjct: 399 NALIDALIQKGMVDMARKYDEEMMAKGLSAKPRV 432
>gi|449436631|ref|XP_004136096.1| PREDICTED: uncharacterized protein LOC101205322 [Cucumis sativus]
Length = 1559
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 206/379 (54%), Gaps = 9/379 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF---VELIQVFDEMPDLV-NEKTYGIL 194
+Y FF WV E + + +N +LD+LG+ F LI + P + T+ IL
Sbjct: 615 SYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQSPSASPDHATFRIL 674
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE--TFFESEKNE 252
RYA AH+V EAI ++R +EF +L D ++F NL+ LC +HV+ A+ F ++ K +
Sbjct: 675 FKRYALAHLVSEAIAAYERLREF-KLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLD 733
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
K N+IL GW +G + + FW+++ K D +Y+ +++ K GK A+
Sbjct: 734 CDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAV 793
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+L++ M +KG K DVV N +I A+ + + A V EMK GC PNV T N++IK
Sbjct: 794 KLYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLF 853
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD 432
C+ R + + LD+M +++ C PN IT++ +SL+KP+E+ + +RM + G D
Sbjct: 854 CENGRFKDAHMMLDQMLKRD--CQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMD 911
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY ++L+ + W V W +ME+ G P++ +Y +I L +KG ++ A Y EM
Sbjct: 912 TYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEM 971
Query: 493 RLKGMVPEPRTGILVNDMN 511
KG+ P+ R + MN
Sbjct: 972 VAKGLSPKLRVELGTQMMN 990
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 220/415 (53%), Gaps = 13/415 (3%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVS---REGDYS 153
++ +C ++ EIE L+ +L +T D+ V+ R AY FF+W R G +
Sbjct: 42 LIISCRQASGLEIE--LDHSDLRVTPDVAERVLERLDNAGMLAYRFFEWARKQRRGGGCA 99
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
F+ ++ L + R++ + V M +VN +T+GI++ +YA A V+EA+ F
Sbjct: 100 HTVRSFHTVVASLAKIRQYQLMWDVVAIMRRQGVVNVETFGIIMRKYARAQKVDEAVYTF 159
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
+ +++G + +L+AF +LL LC+ K+V A+ FE F D KT +I+L GW
Sbjct: 160 NVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGRFSPDAKTYSILLEGWGRAP 219
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
N+ + ++ + D++ + C+PD VTY V++L K G++ A+ + Q M +G +P +
Sbjct: 220 NLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYS 279
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
++ + RI +A+ +M+ G +P+V YN+L+ CK+K+ + + +D+ME
Sbjct: 280 VLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGH 339
Query: 392 NGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
+ PN T+N +L SL K +E V RM + C+ +DTY +++K++ D +
Sbjct: 340 GIT--PNSRTWNIILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDRLE 396
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
W+ M K P +++V+I+GL DKG + A +M KG+ P T
Sbjct: 397 MALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGST 451
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 5/240 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGV 210
P + ++D L + R E + V +M + T Y +L++ Y +E+A+
Sbjct: 238 PDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVAT 297
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCV 269
F ++ G + D+ + L+ C+ K + A + E + + +T NIILN
Sbjct: 298 FLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKLIS 357
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
LG EA R ++ +IK +C+PDS TY + + +L AL++++ M K P + T
Sbjct: 358 LGKDDEAYRVFRRMIK-RCQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMHT 416
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ +I+ LC K + +A +L +M +G P +T+ L + L K R + + +D+M+
Sbjct: 417 FSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKMK 476
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 108/225 (48%), Gaps = 15/225 (6%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ + + K+ A+ F M + G P++ N ++ ALC K + +A E+ +M
Sbjct: 138 TFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQM 197
Query: 354 KNRGCLPNVTTYNSLIKHLCK---IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
R P+ TY+ L++ + + +M VY + + C P+ +T+ ++ SL
Sbjct: 198 NGRFS-PDAKTYSILLEGWGRAPNLPKMRKVYS-----DMLDAGCQPDIVTYGIMVDSLC 251
Query: 411 KP---EEVPWVLERMERNGCKMSTDTYNVILKLY-VNWDCEDKVRHTWEEMEKKGMGPDQ 466
K EE +V++ M GC+ +T Y+V++ Y V ED V T+ +M+K G+ PD
Sbjct: 252 KTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAV-ATFLDMQKDGIVPDV 310
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
Y ++ + ++A +M G+ P RT I++N +
Sbjct: 311 VVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKL 355
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 258/510 (50%), Gaps = 21/510 (4%)
Query: 2 RSRFRQLKRIYREHFQQKFKFHSQLTTQFSKLQSCNSVTSHKTLIPIINLQARNSEFLFL 61
R L+R++ F++ S + SK ++T ++T I I + +S L
Sbjct: 4 RQSLSSLQRLFPR--TSSFQYASARSVSCSK-----TITKNQTSICISSHCNEHSTLLIP 56
Query: 62 GRIETAQLV--HSLANSDE---KSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQC 116
R T+ H + +S + S+ DEIA + + K S + IE L+
Sbjct: 57 NRNYTSHRSTHHRIEHSKQDLKASQKSIVESDEIAQDAEKFCKLISKNPNSCIESLLDGA 116
Query: 117 ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI 176
+ L+ LIV V+ + A +FF+W ++ + + +N +++ LG+ ++F +
Sbjct: 117 PMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIW 176
Query: 177 QVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
+ +M +++ +T+ ++ RYA A V+EA+ F++ ++FG +S F LL LC
Sbjct: 177 NLVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLC 236
Query: 235 RYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ ++V+ A+ F+ K+ F DIK+ I+L GW N+ + ++++ EPD V
Sbjct: 237 KSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVV 296
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ +NA K K A+RLF M K KP +I+ L +KR+ EALE ++
Sbjct: 297 TFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQL 356
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---K 410
K G P TYN+++ C +M Y +DEM +K+G PN T++ +L L +
Sbjct: 357 KLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEM-RKSG-VGPNSRTYDIILHHLIKGR 414
Query: 411 KPEEVPWVLERMERN-GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
K +E V +RM R GC+ + TY+++++++ N + D W+EM+ KG+ P +
Sbjct: 415 KSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLF 474
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +I+ L + +LEDA +YF EM G+ P
Sbjct: 475 STLINSLCHEHKLEDACTYFQEMLDVGIRP 504
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
+++ EA+E +M+ G V+ +N L+ LCK + ++ E D+M K+G P+
Sbjct: 204 RKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKM--KHGRFKPDIK 261
Query: 401 TFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
++ LL+ + + ++ V M G + T+ +++ + D+ + EM
Sbjct: 262 SYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEM 321
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
E K + P + +I+GL + RL++AL +F +++L G PE T
Sbjct: 322 EAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPT 367
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 114/277 (41%), Gaps = 46/277 (16%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
+ G + P + +L+ G+ + ++L +V+ EM PD+V T+GIL+N + A
Sbjct: 252 KHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVV---TFGILINAHCKA 308
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTM 260
+EAI +F + F L+ L K ++ A FFE K + F + T
Sbjct: 309 RKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTY 368
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSK--------------------------------- 287
N ++ +C + A R ++ KS
Sbjct: 369 NAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSR 428
Query: 288 ---CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
CEP TY + + ++ A++++ M KG P + + +I++LC + ++
Sbjct: 429 EPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLE 488
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
+A +EM + G P T +++L + L R +T
Sbjct: 489 DACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTA 525
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LK 410
K +G +YN LI+ L KIK+ ++ + +M++K + + TF + + +
Sbjct: 148 KQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKG---ILSRETFALITRRYARAR 204
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
K +E E+ME+ G +M +N +L K + +++M+ PD +SYT
Sbjct: 205 KVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYT 264
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
+++ G L + EMR +G P+ T GIL+N
Sbjct: 265 ILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILIN 303
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 107/244 (43%), Gaps = 13/244 (5%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
+T +++N + R EA F + ++ + P +VF +++ LG +R E ++
Sbjct: 295 VVTFGILINAHCKARKYDEAIRLFHEMEAK--NIKPSPHVFCTLINGLGSEKRLKEALEF 352
Query: 179 FDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
F+++ P+ TY ++ Y + + A + D ++ G + + +L
Sbjct: 353 FEQLKLSGFAPE---APTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHH 409
Query: 233 LCRYKHVEVAETFFESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
L + + + A + F+ E G + + T +I++ +C V A + W ++ P
Sbjct: 410 LIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLP 469
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
++T +N+L + KL A FQ M + G +P + + AL R AL +
Sbjct: 470 GMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMA 529
Query: 351 REMK 354
++K
Sbjct: 530 EKIK 533
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 258/510 (50%), Gaps = 21/510 (4%)
Query: 2 RSRFRQLKRIYREHFQQKFKFHSQLTTQFSKLQSCNSVTSHKTLIPIINLQARNSEFLFL 61
R L+R++ F++ S + SK ++T ++T I I + +S L
Sbjct: 4 RQSLSSLQRLFPR--TSSFQYASARSVSCSK-----TITKNQTSICISSHCNEHSTLLIP 56
Query: 62 GRIETAQLV--HSLANSDE---KSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQC 116
R T+ H + +S + S+ DEIA + + K S + IE L+
Sbjct: 57 NRNYTSHRSTHHRIEHSKQDLKASQKSIVESDEIAQDAEKFCKLISKNPNSCIESLLDGA 116
Query: 117 ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI 176
+ L+ LIV V+ + A +FF+W ++ + + +N +++ LG+ ++F +
Sbjct: 117 PMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIW 176
Query: 177 QVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
+ +M +++ +T+ ++ RYA A V+EA+ F++ ++FG +S F LL LC
Sbjct: 177 NLVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLC 236
Query: 235 RYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ ++V+ A+ F+ K+ F DIK+ I+L GW N+ + ++++ EPD V
Sbjct: 237 KSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVV 296
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ +NA K K A+RLF M K KP +I+ L +KR+ EALE ++
Sbjct: 297 TFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQL 356
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---K 410
K G P TYN+++ C +M Y +DEM +K+G PN T++ +L L +
Sbjct: 357 KLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEM-RKSG-VGPNSRTYDIILHHLIKGR 414
Query: 411 KPEEVPWVLERMERN-GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
K +E V +RM R GC+ + TY+++++++ N + D W+EM+ KG+ P +
Sbjct: 415 KSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLF 474
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +I+ L + +LEDA +YF EM G+ P
Sbjct: 475 STLINSLCHEHKLEDACTYFQEMLDVGIRP 504
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
+++ EA+E +M+ G V+ +N L+ LCK + ++ E D+M K+G P+
Sbjct: 204 RKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKM--KHGRFKPDIK 261
Query: 401 TFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
++ LL+ + + ++ V M G + T+ +++ + D+ + EM
Sbjct: 262 SYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEM 321
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
E K + P + +I+GL + RL++AL +F +++L G PE T
Sbjct: 322 EAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPT 367
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 114/277 (41%), Gaps = 46/277 (16%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
+ G + P + +L+ G+ + ++L +V+ EM PD+V T+GIL+N + A
Sbjct: 252 KHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVV---TFGILINAHCKA 308
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTM 260
+EAI +F + F L+ L K ++ A FFE K + F + T
Sbjct: 309 RKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTY 368
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSK--------------------------------- 287
N ++ +C + A R ++ KS
Sbjct: 369 NAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSR 428
Query: 288 ---CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
CEP TY + + ++ A++++ M KG P + + +I++LC + ++
Sbjct: 429 EPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLE 488
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
+A +EM + G P T +++L + L R +T
Sbjct: 489 DACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTA 525
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LK 410
K +G +YN LI+ L KIK+ ++ + +M++K + + TF + + +
Sbjct: 148 KQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKG---ILSRETFALITRRYARAR 204
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
K +E E+ME+ G +M +N +L K + +++M+ PD +SYT
Sbjct: 205 KVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYT 264
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
+++ G L + EMR +G P+ T GIL+N
Sbjct: 265 ILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILIN 303
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
+T +++N + R EA F + ++ + P +VF +++ LG +R E ++
Sbjct: 295 VVTFGILINAHCKARKYDEAIRLFHEMEAK--NIKPSPHVFCTLINGLGSEKRLKEALEF 352
Query: 179 FDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
F+++ P+ TY ++ Y + + A + D ++ G + + +L
Sbjct: 353 FEQLKLSGFAPE---APTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHH 409
Query: 233 LCRYKHVEVAETFFESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
L + + + A + F+ E G + + T +I++ +C V A + W ++ P
Sbjct: 410 LIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLP 469
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
++T +N+L + KL A FQ M + G +P + + AL R AL
Sbjct: 470 GMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTAL 526
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 215/405 (53%), Gaps = 8/405 (1%)
Query: 104 STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAIL 163
S+ ++ AL+Q + +++ ++ +V+ ++ AY FF+W ++ Y+ F+ ++
Sbjct: 4 SSVVTLDTALDQSGVRVSEQIVEDVLKKFENAGMVAYRFFEWAEKQRHYNHSVKAFHTVI 63
Query: 164 DVLGRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
D L + R++ + V M +VN +T+ I++ +YA A VEEA+ F+ ++
Sbjct: 64 DSLAKIRQYQLMWDVVKVMKSKRMVNVETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPP 123
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+L+AF LL LC+ K+V A+ F+S K+ F D KT +I+L GW N+ +A+ ++
Sbjct: 124 NLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFR 183
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+++ + C PD VTY V+ L K G++ AL + M KP + ++ +
Sbjct: 184 EMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIEN 243
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
RI +A+ EM+N G P+V YN+LI CK R++ VY L+EM+ K + PN T
Sbjct: 244 RIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVT--PNSRT 301
Query: 402 FNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
FN +L SL + +E V RM + C+ DTY +++K++ D K W+ M+
Sbjct: 302 FNIILSSLIGRGETDEAYRVFLRMIK-VCEPDADTYTMMIKMFCERDELKKALKVWKYMK 360
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K P ++ V+I+GL +KG + A EM KG+ P T
Sbjct: 361 LKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVT 405
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 121/250 (48%), Gaps = 10/250 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGV 210
P + ++DVL +A R E + + +EM V + T Y +L++ Y + +E+A+
Sbjct: 192 PDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVST 251
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCV 269
F + G D++ + L+ C+ ++ V E + + +T NIIL+
Sbjct: 252 FLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIG 311
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G EA R + +IK CEPD+ TY + ++ +L AL++++ M K P + T
Sbjct: 312 RGETDEAYRVFLRMIKV-CEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHT 370
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+I+ LC K + +A +L EM +G P+ T+ L + L K R E V ++L
Sbjct: 371 FQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGR-EDVLKFL---- 425
Query: 390 QKNGSCLPNE 399
QK + L N+
Sbjct: 426 QKKINVLVND 435
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 211/418 (50%), Gaps = 12/418 (2%)
Query: 95 QNILKTC---SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGD 151
Q+ + C S + +K L + ++ L+V V+ R A +FF W ++
Sbjct: 93 QDAARICTLLSTHSGSHADKLLEDASIKVSPSLVVEVLKRLSNAGVIALSFFTWAEKQKG 152
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIG 209
+ + +NA+++ LG+ ++F + + +EM L+N+ T+ ++ R+A A VEEAI
Sbjct: 153 FKYNTESYNALIEALGKIKQFKLIRSLVNEMKSRKLLNKDTFALISRRHARARKVEEAIE 212
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWC 268
F+R +EFG + S F LL LC+ +HVE A F+ +K F DIK+ I+L GW
Sbjct: 213 AFERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWG 272
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
N+ + ++ EPD VTY ++A K K A+ LF M K KP
Sbjct: 273 KEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPH 332
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+I+ L +KR+ EALE K+ G P TYNSL+ C R++ ++ +DEM
Sbjct: 333 VYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEM 392
Query: 389 EQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN-GCKMSTDTYNVILKLYVNW 444
+ + PN T++ +L L ++ E + ++M GC+ + TY +I++++ N
Sbjct: 393 RKHSAG--PNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNE 450
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
D D + W++M+ KG+ P Y+ +I L K +L +A YF EM G+ P +
Sbjct: 451 DRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAK 508
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 129/289 (44%), Gaps = 18/289 (6%)
Query: 241 VAETFFE-SEKNE-FGYDIKTMNIILNGWCVLGNVYEAK--RFWKDIIKSKCEPDSVTYA 296
+A +FF +EK + F Y+ ++ N ++ LG + + K R + +KS+ + T+A
Sbjct: 139 IALSFFTWAEKQKGFKYNTESYNALIEA---LGKIKQFKLIRSLVNEMKSRKLLNKDTFA 195
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+ K+ A+ F+ M E G K + N ++D LC + + +A +V +MK R
Sbjct: 196 LISRRHARARKVEEAIEAFERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKR 255
Query: 357 GCLPNVTTYNSLIKHLCK---IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
+P++ +Y L++ K + R++ VY +E K P+ +T+ L+ + K +
Sbjct: 256 RFVPDIKSYTILLEGWGKEHNLLRLDEVY-----LEMKYDGFEPDVVTYGILISAYCKAK 310
Query: 414 EVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+ +E ME CK + Y ++ + + +E + G P+ +Y
Sbjct: 311 KYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYN 370
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
++ R++DA EMR P RT ++ IK + E
Sbjct: 371 SLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNE 419
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 5/226 (2%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAI 208
+ P + ++ +A+++ I++F EM + T Y L+N + + EA+
Sbjct: 292 FEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEAL 351
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGW 267
F+R K G + + +L+ C ++ A + E K+ G + +T +IIL+
Sbjct: 352 EFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHL 411
Query: 268 CVLGNVYEAK-RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
EA RF K + CEP TY V + ++ A +++ M KG P
Sbjct: 412 IKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPG 471
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ + +I +LC K ++ EA + +EM + G P +++L + L
Sbjct: 472 MHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQAL 517
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 6/210 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P +V+ +++ LG +R E ++ F+ TY L+ Y + +++A V
Sbjct: 329 PTPHVYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQV 388
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIILNGWC 268
D ++ + + +L L + + A F+ NE G + + T II+ +C
Sbjct: 389 IDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFC 448
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
V AK+ W + P Y+ + +L K KLG A + FQ M + G +P
Sbjct: 449 NEDRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAK 508
Query: 329 TCNCIIDALCFKKRIPEALEVLREM-KNRG 357
+ + AL + + EAL + R++ K RG
Sbjct: 509 MFSNLKQALLDEGKNDEALNLARKINKLRG 538
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 228/439 (51%), Gaps = 12/439 (2%)
Query: 88 DEIAINVQNILKTCS--VSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
DE A +V+ I + S ++E +LN+ + L LIV V++R Y FF W
Sbjct: 64 DEFAGDVEKIYRILRNYHSRVPKLELSLNESGIDLRPGLIVRVLSRCGDAGNLGYRFFLW 123
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAA 201
+++ Y V +++ +L + R+F + + +EM P+L+ + + +L+ R+A+A
Sbjct: 124 ATKQPGYCHSYEVCKSMVKILSKMRQFGAVWGLIEEMRKENPELIEPELFVVLIRRFASA 183
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
+MV++A+ V D ++G D F LL LC+ V+ A FE + + +++
Sbjct: 184 NMVKKAVEVLDEMPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMREKIPPNLRYFT 243
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+L GWC G + EAK + ++ EPD V + ++ GK+ A L M ++
Sbjct: 244 SLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKR 303
Query: 322 GRKPDVVTCNCIIDALC-FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G +P+ +I ALC +KR+ EA+ V EM+ GC ++ TY +LI CK ++
Sbjct: 304 GYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 363
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVI 437
Y LD+M +K +P+++T+ +L + +K EE ++E+M++ GC YNV+
Sbjct: 364 GYSVLDDMRKKG--VMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVV 421
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
++L N+ + W EME G+ P + +MI+G +G L +A S+F EM +G+
Sbjct: 422 IRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSHFKEMVSRGI 481
Query: 498 VPEPRTGILVNDMNIKLKE 516
P+ G L + +N L++
Sbjct: 482 FSAPQYGTLKSLLNTLLRD 500
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 164/388 (42%), Gaps = 46/388 (11%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P F ++L R + +E +V +M PD+V + LL+ YA A + +A
Sbjct: 237 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIV---VFTNLLSGYAHAGKMADA 293
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRY--KHVEVAETFFESEKNEFGYDIKTMNIILN 265
+ + ++ G + + + L+ LCR + E F E E+ DI T +++
Sbjct: 294 YDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALIS 353
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C G + + D+ K P VTY + A KK + L L + M + G P
Sbjct: 354 GFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHP 413
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D++ N +I C + + EA+ + EM+ G P + +I + +
Sbjct: 414 DLLIYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSHF 473
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
EM + P T LL +L + +++ +M+ D ++ I +
Sbjct: 474 KEMVSRGIFSAPQYGTLKSLLNTLLRDDKL------------EMAKDVWSCISNKTSS-- 519
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
CE V ++T+ IH L+ KG +++A SY +M ++P+P T +
Sbjct: 520 CELNV----------------SAWTIWIHALFAKGHVKEACSYCLDMMEMDLMPQPNTYV 563
Query: 506 -LVNDMNIKLKER---GEQGKKVIKLTS 529
L+ +N KL R E +KV+K+ S
Sbjct: 564 KLMKGLN-KLYNRTIAAEITEKVMKMAS 590
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 225/434 (51%), Gaps = 12/434 (2%)
Query: 88 DEIAINVQNILKTC--SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
DE A V+ I + S ++E ALN+ + L LI+ V++R Y FF W
Sbjct: 61 DEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLW 120
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAA 201
+++ Y V +++ +L + R+F + + +EM P+L+ + + +L+ R+A+A
Sbjct: 121 ATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASA 180
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
+MV++A+ V D ++G D F LL LC+ V+ A FE + +F +++
Sbjct: 181 NMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFT 240
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+L GWC G + EAK + ++ EPD V + ++ GK+ A L M ++
Sbjct: 241 SLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKR 300
Query: 322 GRKPDVVTCNCIIDALC-FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G +P+V +I ALC +KR+ EA+ V EM+ GC ++ TY +LI CK ++
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVI 437
Y LD+M +K +P+++T+ ++ + +K EE ++E+M+R GC YNV+
Sbjct: 361 GYSVLDDMRKK--GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
++L + W EME G+ P ++ +MI+G +G L +A ++F EM +G+
Sbjct: 419 IRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Query: 498 VPEPRTGILVNDMN 511
P+ G L + +N
Sbjct: 479 FSAPQYGTLKSLLN 492
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 164/390 (42%), Gaps = 46/390 (11%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P F ++L R + +E +V +M PD+V + LL+ YA A +
Sbjct: 232 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIV---VFTNLLSGYAHAGKMA 288
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRY--KHVEVAETFFESEKNEFGYDIKTMNII 263
+A + + ++ G +++ + L+ LCR + E F E E+ DI T +
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++G+C G + + D+ K P VTY + A KK + L L + M +G
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD++ N +I C + EA+ + EM+ G P V T+ +I +
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACN 468
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+ EM + P T LL +L + +++ +M+ D
Sbjct: 469 HFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKL------------EMAKDV---------- 506
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
W C + E + ++T+ IH LY KG +++A SY +M ++P+P T
Sbjct: 507 WSCISNKTSSCE--------LNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNT 558
Query: 504 -GILVNDMNIKLKER---GEQGKKVIKLTS 529
L+ +N KL R E +KV+K+ S
Sbjct: 559 YAKLMKGLN-KLYNRTIAAEITEKVVKMAS 587
>gi|356547448|ref|XP_003542124.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Glycine max]
Length = 445
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 194/379 (51%), Gaps = 13/379 (3%)
Query: 135 DWEAAYTFFKWVSR-EGDYSPGSNVFNAILDVLGRARRF---VELIQVFDEMPD-LVNEK 189
DW+ A FF WV + ++ FN +LD+LG+ F +LI+ + P N
Sbjct: 47 DWKRALEFFNWVEESHSQFHHSTDTFNLMLDILGKFFEFKLCWDLIRRMNAHPSSPPNHA 106
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
T+ ++ RY +AH V +AI F+R EF L D ++F NLL LC YKHV A+
Sbjct: 107 TFRLMFKRYVSAHSVNDAIDTFNRLGEFN-LKDHTSFSNLLDALCEYKHVLEAQDLLFGN 165
Query: 250 KNEFGYDI------KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
N + K N++L GW LG + FW+++ K D +Y+ +++ L
Sbjct: 166 DNRVTLSVDPIGNTKIHNMVLRGWFKLGWWSKCNEFWEEMDKKGVHKDLHSYSIYMDILC 225
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K GK A++LF+ + +KG K DVV N +I A+ + ++ V REMK G P V
Sbjct: 226 KGGKPWKAVKLFKEIKKKGFKLDVVVYNIVIRAIGLSHGVDFSIRVFREMKELGIKPTVV 285
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME 423
TYN+LI+ LC R + L + +G C P ++++ S++KP+++ + + M
Sbjct: 286 TYNTLIRLLCDCYRHKEALALLRTIMPSDG-CHPTAVSYHCFFASMEKPKQILAMFDEMV 344
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+G + + DTY ++L + W V W +M++ G PD +Y +I L DK ++
Sbjct: 345 ESGVRPTMDTYVMLLNKFGRWGFLRPVFMVWNKMKQLGCSPDAAAYNALIDALVDKALID 404
Query: 484 DALSYFHEMRLKGMVPEPR 502
A Y EM KG+ P+PR
Sbjct: 405 MARKYDEEMLAKGLSPKPR 423
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 225/434 (51%), Gaps = 12/434 (2%)
Query: 88 DEIAINVQNILKTC--SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
DE A V+ I + S ++E ALN+ + L LI+ V++R Y FF W
Sbjct: 61 DEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLW 120
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAA 201
+++ Y V +++ +L + R+F + + +EM P+L+ + + +L+ R+A+A
Sbjct: 121 ATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASA 180
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
+MV++A+ V D ++G D F LL LC+ V+ A FE + +F +++
Sbjct: 181 NMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFT 240
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+L GWC G + EAK + ++ EPD V + ++ GK+ A L M ++
Sbjct: 241 SLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKR 300
Query: 322 GRKPDVVTCNCIIDALC-FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G +P+V +I ALC +KR+ EA+ V EM+ GC ++ TY +LI CK ++
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVI 437
Y LD+M +K +P+++T+ ++ + +K EE ++E+M+R GC YNV+
Sbjct: 361 GYSVLDDMRKKG--VMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
++L + W EME G+ P ++ +MI+G +G L +A ++F EM +G+
Sbjct: 419 IRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Query: 498 VPEPRTGILVNDMN 511
P+ G L + +N
Sbjct: 479 FSAPQYGTLKSLLN 492
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 166/390 (42%), Gaps = 46/390 (11%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P F ++L R + +E +V +M PD+V + LL+ YA A +
Sbjct: 232 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIV---VFTNLLSGYAHAGKMA 288
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRY--KHVEVAETFFESEKNEFGYDIKTMNII 263
+A + + ++ G +++ + L+ LCR + E F E E+ DI T +
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++G+C G + + D+ K P VTY + A KK + L L + M +G
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD++ N +I C + EA+ + EM+ G P V T+ +I +
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACN 468
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+ EM + P T LL +L + +++ +M+ D ++ I +
Sbjct: 469 HFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKL------------EMAKDVWSCISNKTSS 516
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
CE V ++T+ IH LY KG +++A SY +M ++P+P T
Sbjct: 517 --CELNV----------------SAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNT 558
Query: 504 -GILVNDMNIKLKER---GEQGKKVIKLTS 529
L+ +N KL R E +KV+K+ S
Sbjct: 559 YAKLMKGLN-KLYNRTIAAEITEKVVKMAS 587
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 208/396 (52%), Gaps = 8/396 (2%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E AL+ L + +++ V++R++ +Y FF+W + G ++ + + +L +LG+
Sbjct: 183 LEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLHILGK 242
Query: 169 ARRFVELIQVFDEMPDL--VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
R+F ++ + EM + ++ + + + +AAA ++ A+GVF+ K+ G D + +F
Sbjct: 243 TRQFEMMVAIIQEMGKVGALSMDAFKVAIKSFAAAGEIKNAVGVFELMKKNGFDDGVESF 302
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
LL+ L A F+ ++ D+++ ++ WC N+ EA R W ++++
Sbjct: 303 NCLLVALANEGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEK 362
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
+PD V + T + L + + AL++F+ M KG P+V T +I C + ++ A
Sbjct: 363 GMKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDMA 422
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
+E EM+ C P+V TY L+ KRM+ V L+EM QK C P+ T+N L+
Sbjct: 423 MECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKG--CPPDARTYNALI 480
Query: 407 KSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR-HTWEEMEKKGM 462
K L K P++ + ++M + G + + TYN+++K Y D + WEEM ++G+
Sbjct: 481 KLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGI 540
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
PD SYTV I+G GR E+A Y EM KGM
Sbjct: 541 CPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMT 576
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 127/335 (37%), Gaps = 60/335 (17%)
Query: 102 SVSTKGEIEKALNQCELTLT---DD-------LIVNVINRYRFDWEAAYTFFKWVSREGD 151
S + GEI+ A+ EL DD L+V + N EA F K G
Sbjct: 273 SFAAAGEIKNAVGVFELMKKNGFDDGVESFNCLLVALANE-GLGREARQVFDKM---HGQ 328
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
YSP + A++ AR VE +V++EM PD+V T ++
Sbjct: 329 YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNT---MIEGLLRGQRRP 385
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
EA+ +F+ K G ++ + L+ C+ +++A E F E ++ D+ T +L
Sbjct: 386 EALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLL 445
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G+ + +++ + C PD+ TY + LT + A R+++ M +KG +
Sbjct: 446 VGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLE 505
Query: 325 PDVVTCNCI------------------------------------IDALCFKKRIPEALE 348
P + T N + I+ R EA +
Sbjct: 506 PTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFINGHIRHGRPEEAYK 565
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+ EM N+G YN K + + +YE
Sbjct: 566 YIEEMINKGMTAPQIDYNKFAADFSKAGKPDILYE 600
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 217/437 (49%), Gaps = 11/437 (2%)
Query: 88 DEIAINVQNILKTCSV--STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
DE A +V+ + + S ++E AL + + + L V++R AY F+ W
Sbjct: 86 DEFASDVEKVYRILRKYHSRVPKLELALRESGVVVRPGLTERVLSRCGDAGNLAYRFYSW 145
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAA 201
S++ + + + A++ VL R R+F + + +EM P L+ + + IL+ R+A+A
Sbjct: 146 ASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRFASA 205
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
MV +A+ V D ++G D F LL LC+ V+ A + FE + + +K
Sbjct: 206 RMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYRWKPSVKHFT 265
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+L GWC G + EAK + EPD V Y + + GK+G A L + M K
Sbjct: 266 SLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRK 325
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
+P+ + +I +LC +R+ EA + EM+ GC +V TY++LI CK +++
Sbjct: 326 RCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRG 385
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVIL 438
YE LDEM Q+ PN++ + +++ + ++ EE ++ M++ GC YN ++
Sbjct: 386 YELLDEMIQQGH--FPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVI 443
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+L + W EME G+ P ++ +MI+G ++G L +A YF EM +G+
Sbjct: 444 RLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRGLF 503
Query: 499 PEPRTGILVNDMNIKLK 515
P+ G L MN L+
Sbjct: 504 TAPQYGTLKELMNSLLR 520
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 106/282 (37%), Gaps = 49/282 (17%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY K + R+ P + + ++ L + R E ++F EM D+V TY
Sbjct: 315 AYDLLKEMRRK-RCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVV---TYS 370
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKN 251
L++ + ++ + D + G + +Q+++L + + +E + E +K
Sbjct: 371 TLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKI 430
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
D+ N ++ C LG V E + W ++ S P T+ +N ++G L A
Sbjct: 431 GCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEA 490
Query: 312 LRLFQAMWEKG--RKPDVVTC--------------------NCI---------------- 333
F+ M +G P T NCI
Sbjct: 491 CEYFKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIW 550
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
I AL K + EA +M ++ +PN T+ L+ L K+
Sbjct: 551 IHALFSKGHVKEACSFCIDMMDKDLMPNPDTFAKLMHGLKKL 592
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 221/437 (50%), Gaps = 13/437 (2%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
++E L+ ++ DL+ V+ R + +A+ FF W R + P + ++ ++D+LG
Sbjct: 67 DLEVGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHIVVDILG 126
Query: 168 RARRFVEL----IQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
+ +F L I++ + ++ + + + Y+ A + ++AI F+R EFG +
Sbjct: 127 SSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGEFGIRAGV 186
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
LL LC+ KHV A+ FF+ K+ F +KT +I+ GW V+G+ A++ + ++
Sbjct: 187 DDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEM 246
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+ C D + Y + + AL K GK A ++F M G PD T + I + C + +
Sbjct: 247 RERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDL 306
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
VL K + LPNV TYN +IK LCK + +E Y+ LDEM ++ + P+ ++N
Sbjct: 307 HTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVT--PDTWSYN 364
Query: 404 YLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
+ EV L +RM+R+ C TYN++LKL V D+ WE M K+
Sbjct: 365 AIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKR 424
Query: 461 GMGPDQRSYTVMIHGLYDKG-RLEDALSYFHEMRLKGMVPEPRTGILVND--MNIKLKER 517
G P +Y VMIHG K +LE+A YF M +G+ P T L+ D + I K++
Sbjct: 425 GFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIGFKDQ 484
Query: 518 -GEQGKKVIKLTSLGLK 533
G K+ + TS ++
Sbjct: 485 VAILGDKMKRSTSCSIQ 501
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 220/438 (50%), Gaps = 17/438 (3%)
Query: 73 LANSDEKSEFQRYPGDEIAINVQNILKTCSV-------STKGEIEKALNQCELTLTDDLI 125
LA SDE + A N + + + C+ +E AL+ L + ++
Sbjct: 140 LAASDEDQGSSEQ--EAAASNPEGVDRVCAAIADVVASGADANLEAALSALSPPLCEAVV 197
Query: 126 VNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--P 183
+ V++R++ +Y FF+W + G ++ + + +L +LG+ R+F ++ + EM
Sbjct: 198 LAVLHRFKHAHRPSYRFFRWATVSGGFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKA 257
Query: 184 DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE 243
++ + + + +AAA ++ A+GVF+ ++ G D + +F LL+ L + A
Sbjct: 258 GALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREAR 317
Query: 244 TFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
F+ ++ D+++ ++ WC N+ EA R W ++++ +PD V + T + L
Sbjct: 318 QVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLL 377
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
+ + A+++F+ M KG P+V T +I C + ++ A+E EM+ C P+V
Sbjct: 378 RGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVA 437
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLE 420
TY L+ K+M+ V L+EM QK C P+ T+N L+K L P++ + +
Sbjct: 438 TYTCLLVGYGNAKQMDRVTAVLEEMTQKG--CPPDARTYNALIKLLTNRNMPDDAARIYK 495
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVR-HTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+M + G + + TYN+++K Y D + WEEM ++G+ PD SYTV I+G
Sbjct: 496 KMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINGHIRH 555
Query: 480 GRLEDALSYFHEMRLKGM 497
GR E+A Y EM KGM
Sbjct: 556 GRPEEAYKYIEEMINKGM 573
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 130/337 (38%), Gaps = 64/337 (18%)
Query: 102 SVSTKGEIEKALNQCELTLTD---------DLIVNVINRYRFDWEAAYTFFKWVSREGDY 152
S + GEI+ A+ EL + + ++ + + EA F K G Y
Sbjct: 271 SFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKM---HGQY 327
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + A++ AR VE +V++EM PD+V T ++ E
Sbjct: 328 SPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNT---MIEGLLRGQRRPE 384
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A+ +F+ K G ++ + L+ C+ +++A E F E ++ + D+ T +L
Sbjct: 385 AVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLV 444
Query: 266 GWCVLGNVYEAKRF---WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ------ 316
G+ GN + R +++ + C PD+ TY + LT + A R+++
Sbjct: 445 GY---GNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKG 501
Query: 317 --------------------------AMWE----KGRKPDVVTCNCIIDALCFKKRIPEA 346
A+WE +G PDV + I+ R EA
Sbjct: 502 LEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINGHIRHGRPEEA 561
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+ + EM N+G YN K + + ++E
Sbjct: 562 YKYIEEMINKGMKAPQIDYNKFAADFSKAGKPDILFE 598
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 221/437 (50%), Gaps = 13/437 (2%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
++E L+ ++ DL+ V+ R + +A+ FF W R + P + ++ ++D+LG
Sbjct: 67 DLEVGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHIVVDILG 126
Query: 168 RARRFVEL----IQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
+ +F L I++ + ++ + + + Y+ A + ++AI F+R EFG +
Sbjct: 127 GSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGEFGIRAGV 186
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
LL LC+ KHV A+ FF+ K+ F +KT +I+ GW V+G+ A++ + ++
Sbjct: 187 DDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEM 246
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+ C D + Y + + AL K GK A ++F M G PD T + I + C + +
Sbjct: 247 RERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDL 306
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
VL K + LPNV TYN +IK LCK + +E Y+ LDEM ++ + P+ ++N
Sbjct: 307 HTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVT--PDTWSYN 364
Query: 404 YLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
+ EV L +RM+R+ C TYN++LKL V D+ WE M K+
Sbjct: 365 AIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKR 424
Query: 461 GMGPDQRSYTVMIHGLYDKG-RLEDALSYFHEMRLKGMVPEPRTGILVND--MNIKLKER 517
G P +Y VMIHG K +LE+A YF M +G+ P T L+ D + I K++
Sbjct: 425 GFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIGFKDQ 484
Query: 518 -GEQGKKVIKLTSLGLK 533
G K+ + TS ++
Sbjct: 485 VAILGDKMKRSTSCSIQ 501
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 207/404 (51%), Gaps = 10/404 (2%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
++E +LN ++ +L+ V+ R + +A+ FF W R + ++ ++++LG
Sbjct: 64 DLETSLNAFSSEISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSEESYHILVNILG 123
Query: 168 RARRFVELIQVFDEMPDL----VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
+R+F L EM + +N++ ++ Y+ A++ +AI FDR EFG +
Sbjct: 124 TSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSDAIRAFDRMAEFGLRPSV 183
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
LL LC+ KHV+ A+ FF+ K++F KT +I++ GW +G EA++ + ++
Sbjct: 184 DDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGDIGEAVEARKVFDEM 243
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
C D + Y + + AL K G + A ++F+ + G +PD + I A C I
Sbjct: 244 RGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNI 303
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
VL MK +PNV TYN +IK LCK ++E Y+ L EM ++ S P+ ++N
Sbjct: 304 HSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVS--PDAWSYN 361
Query: 404 YLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
+L + EV ++ M ++ C +YN++LKL V D+ WE M ++
Sbjct: 362 TILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGER 421
Query: 461 GMGPDQRSYTVMIHGLY-DKGRLEDALSYFHEMRLKGMVPEPRT 503
G P +Y+VMIHGL KG+LE+A YF M +G+ P T
Sbjct: 422 GFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYAST 465
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 220/438 (50%), Gaps = 13/438 (2%)
Query: 88 DEIAINVQNILKTCSV--STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
DE A +V+ + + S ++E AL + + + L V+NR AY F+ W
Sbjct: 60 DEFASDVEKVYRILRKYHSRVPKLELALRESGVVVRPGLTERVLNRCGDAGNLAYRFYSW 119
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAA 201
S++ + + + A++ VL R R+F + + +EM P L+ + + IL+ R+A+A
Sbjct: 120 ASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRFASA 179
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
MV +A+ V D +G D F LL L + V+ A + FE + + +K
Sbjct: 180 RMVHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYRWKPSVKHFT 239
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+L GWC G + EAK + + EPD V Y + + K+G A L + M K
Sbjct: 240 SLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRK 299
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G +P+ + +I +LC +R+ EA V EM+ GC ++ TY++LI CK +++
Sbjct: 300 GCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRG 359
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVIL 438
YE LDEM Q+ PN++ + +++ + ++ EE ++ M++ GC YN ++
Sbjct: 360 YELLDEMIQQGH--FPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVI 417
Query: 439 KLYVNW-DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+L + ++ VR W EME G+ P ++ +MI+G ++G L +A YF EM +G+
Sbjct: 418 RLACKLGEVKEGVR-LWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGRGL 476
Query: 498 VPEPRTGILVNDMNIKLK 515
P+ G L MN L+
Sbjct: 477 FAAPQYGTLKELMNSLLR 494
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 148/326 (45%), Gaps = 14/326 (4%)
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDI--KTMNIILNGWCVLGN 272
K+ G D A++ ++ L R + E + E + I + I++ +
Sbjct: 122 KQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRFASARM 181
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM---WEKGRKPDVVT 329
V++A + ++ CEPD + ++AL K G + A LF+ + W KP V
Sbjct: 182 VHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYRW----KPSVKH 237
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
++ C + ++ EA VL +MK+ G P++ YN+L+ + +M Y+ L EM
Sbjct: 238 FTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMR 297
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+K C PN ++ L++SL ++ EE V M+RNGC+ TY+ ++ + W
Sbjct: 298 RKG--CEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGK 355
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGIL 506
+ +EM ++G P+Q Y ++ K LE+ +EM+ G P+
Sbjct: 356 IKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNT 415
Query: 507 VNDMNIKLKERGEQGKKVIKLTSLGL 532
V + KL E E + ++ S GL
Sbjct: 416 VIRLACKLGEVKEGVRLWNEMESSGL 441
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 210/404 (51%), Gaps = 10/404 (2%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
++E +L ++ L+ V+ R + +A FF W R + ++ ++D+LG
Sbjct: 60 DLELSLTTYSSHISTTLVEQVLKRCKNLGFSAQRFFLWAKRIPGFDHSKESYHILVDILG 119
Query: 168 RARRFVEL----IQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
+++F L I++ + ++ + + ++ Y+ A++ +AI FDR EFG +
Sbjct: 120 SSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRANLPSDAIRAFDRMVEFGLKPTI 179
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
LL LC+ KH + A+ F+ K++F KT +I++ GW +G A + + ++
Sbjct: 180 DDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILVRGWGDIGESVSACKVFDEM 239
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+ +C D + Y + + A K GK+ A ++F+ M G KPD T + I A C I
Sbjct: 240 REQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDI 299
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
A VL EMK +PNV TYN +IK LCK +++E Y+ L+E+ +++G P+ ++N
Sbjct: 300 HLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQ--PDAWSYN 357
Query: 404 YLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
+L + EV ++ RM ++ C +YN++LKL + D+ WE M +K
Sbjct: 358 AILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEK 417
Query: 461 GMGPDQRSYTVMIHGL-YDKGRLEDALSYFHEMRLKGMVPEPRT 503
G P +Y+VM+HGL KG+LE+A YF M +G+ P T
Sbjct: 418 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSST 461
>gi|147827256|emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]
Length = 655
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 198/380 (52%), Gaps = 36/380 (9%)
Query: 132 YRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF---VELIQVFDEMP-DLVN 187
Y DW+ A FF WV + ++ ++ +N ++D+LG+ F LIQ P N
Sbjct: 299 YANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRMKADPVAYPN 358
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF- 246
T+ + RYAAAH+VEEA+ + R +EF L D +++ NL+ LC YKHV AE F
Sbjct: 359 HVTFRFVFKRYAAAHLVEEAMNAYYRTEEFN-LRDETSYSNLIDALCEYKHVIEAEELFL 417
Query: 247 -ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
ES+ F D+K NIIL GW +K+ + +C K
Sbjct: 418 KESKDLVFNDDVKIYNIILRGW------------FKNGVVEEC---------------KS 450
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK A++L++ M +KG + DVV N +I A+ + + ++ V RE K GC PNV TY
Sbjct: 451 GKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREXKEVGCEPNVVTY 510
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERN 425
N++IK LC+ R+ Y D+M +K + PN IT++ ++KP+++ +RM +
Sbjct: 511 NTIIKLLCENGRIREAYGVFDQMREKGYA--PNVITYHCFFGCIEKPKQILRTFDRMINS 568
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G + DTY +++K + W V W++ME++G PD +Y +I L KG ++ A
Sbjct: 569 GVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLA 628
Query: 486 LSYFHEMRLKGMVPEPRTGI 505
Y EM KG+ +PR +
Sbjct: 629 RKYEEEMLAKGLSAKPRVDL 648
>gi|357455405|ref|XP_003597983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487031|gb|AES68234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 204/406 (50%), Gaps = 22/406 (5%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE---LIQVFDEMP-DLVNEKT 190
D++ A FF WV + + + +N +LD+LG+ F + LI + P L N T
Sbjct: 89 DYKRALEFFNWVETKFKFQHSTETYNLVLDILGKFFEFQQCWNLIHRMRQNPHSLPNHTT 148
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESE 249
+ ++ RY +AH V++A+ F R EF L D ++F NL+ LC YKHV E + F +
Sbjct: 149 FRVMFKRYVSAHCVQDAVNTFQRLNEF-NLKDETSFSNLIDALCEYKHVLEAQDLVFGDK 207
Query: 250 KNEF------GYD--------IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
KN+ G D K NI+L GW LG + FW ++ + E D +Y
Sbjct: 208 KNQTLTWIVDGVDGFVASSKNTKIFNIVLRGWYKLGWWSKCWEFWDEMDRRGVEKDLHSY 267
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+ +++ L+K GK A++LF+ M KG + DVV N +I A+ + + ++ + EMK+
Sbjct: 268 SIYMDILSKGGKPWKAVKLFKEMKRKGIQLDVVVYNIVIRAIGVSQGVDFSIRMFCEMKD 327
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
G P V TYN++I+ LC R + + M + C PN +++ L+KP+ +
Sbjct: 328 LGLNPTVVTYNTIIRLLCDSYRYKEALTLIRTM--RRDGCSPNAVSYQCFFACLEKPKFI 385
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
+ + M +G + + DTY ++LK + W V W ME+ G PD +Y +I
Sbjct: 386 IELFDGMIESGVRPTMDTYVMLLKKFARWGFLRLVFLVWNRMEELGCSPDASAYNALIDA 445
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQG 521
L +KG ++ A Y EM KG+ P+PR + L+ G +G
Sbjct: 446 LVEKGLIDMARKYDEEMLAKGLSPKPRKELGTKPYVYSLQWEGLKG 491
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 219/439 (49%), Gaps = 13/439 (2%)
Query: 87 GDEIAINVQNILKTCSV--STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFK 144
DE +++V+ + + + ++E AL + + + L V++R Y FF
Sbjct: 70 ADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERVLSRCGDAGNLGYRFFV 129
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAA 200
W S++ Y V+ A++ LG+ R+F + + +EM P ++ + + +L+ R+A+
Sbjct: 130 WASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFAS 189
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM 260
MV++A+ V D ++G D F LL LC+ V+ A + FE + F +++
Sbjct: 190 VRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHF 249
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+L GWC G + EAK I ++ EPD V Y + + GK+ A L M +
Sbjct: 250 TSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKK 309
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
P+ + +I + C +++ EA+ + EM+ GC +V TY +LI CK +
Sbjct: 310 VNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDK 369
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVI 437
YE LD+M QK P+++++ ++ + +K EE+ ++E M + GC + YN +
Sbjct: 370 AYEILDDMIQKGHD--PSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTM 427
Query: 438 LKLYVNW-DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++L D ++ VR W EM+ G+ P +Y +M+HG +G L +A YF EM +G
Sbjct: 428 IRLVCKLGDLKEAVR-LWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERG 486
Query: 497 MVPEPRTGILVNDMNIKLK 515
++ P+ G L N L+
Sbjct: 487 LLSAPQYGTLKELTNALLR 505
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 212/423 (50%), Gaps = 15/423 (3%)
Query: 88 DEIAINVQNILKTCSV-------STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAY 140
D N + + + C+ +E AL+ L + +++ V++R++ +Y
Sbjct: 151 DAATSNPEGVGRVCAAIADVIAAGADANLEAALSALSPPLCEAVVLAVLHRFKHAHRPSY 210
Query: 141 TFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRY 198
FF+W + G ++ + + +L +LG+ R+F ++ + EM ++ + + + +
Sbjct: 211 RFFRWATASGGFTHTTITYCKMLLILGKTRQFESMVALLQEMGKAGTLSMDAFKVAIKSF 270
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK 258
AAA ++ A+GVF+ ++ G D + +F LL+ L A F+ ++ D++
Sbjct: 271 AAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALANEGLGREARQVFDKMLGQYSPDLR 330
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
+ ++ WC N+ EA R W ++++ +PD V + T + L + + A+++F+ M
Sbjct: 331 SYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELM 390
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
KG P+V T +I C + ++ A+E EM+ C P+V TY L+ KRM
Sbjct: 391 KAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRM 450
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN 435
+ V L+EM QK C P+ T+N L+K L K P++ + ++M + G + TYN
Sbjct: 451 DRVTAVLEEMTQKG--CPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYN 508
Query: 436 VILKLYVNWDCEDKVR-HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+++K Y D + WEEM ++G+ PD SYTV I G GR E+A Y EM
Sbjct: 509 MMMKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFISGHIRHGRPEEAYKYIEEMIN 568
Query: 495 KGM 497
KGM
Sbjct: 569 KGM 571
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 131/335 (39%), Gaps = 60/335 (17%)
Query: 102 SVSTKGEIEKALNQCELTLT---DD-------LIVNVINRYRFDWEAAYTFFKWVSREGD 151
S + GEI+ A+ EL DD L+V + N EA F K + G
Sbjct: 269 SFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALANE-GLGREARQVFDKML---GQ 324
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
YSP + A++ AR VE +V++EM PD+V T L R H
Sbjct: 325 YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQH--- 381
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
EA+ +F+ K G ++ + L+ C+ +++A E F E ++ D+ T +L
Sbjct: 382 EAVKMFELMKAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLL 441
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G+ + +++ + C PD+ TY + LT + A R+++ M +KG
Sbjct: 442 VGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLD 501
Query: 325 PDVVTCNCIIDA----------------------LCF--------------KKRIPEALE 348
P + T N ++ + +C R EA +
Sbjct: 502 PTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFISGHIRHGRPEEAYK 561
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+ EM N+G N L K +++ +YE
Sbjct: 562 YIEEMINKGMKAPQIDCNKFAADLSKAGKLDMLYE 596
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 219/439 (49%), Gaps = 13/439 (2%)
Query: 87 GDEIAINVQNILKTCSV--STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFK 144
DE +++V+ + + + ++E AL + + + L V++R Y FF
Sbjct: 93 ADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERVLSRCGDAGNLGYRFFV 152
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAA 200
W S++ Y V+ A++ LG+ R+F + + +EM P ++ + + +L+ R+A+
Sbjct: 153 WASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFAS 212
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM 260
MV++A+ V D ++G D F LL LC+ V+ A + FE + F +++
Sbjct: 213 VRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHF 272
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+L GWC G + EAK I ++ EPD V Y + + GK+ A L M +
Sbjct: 273 TSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKK 332
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
P+ + +I + C +++ EA+ + EM+ GC +V TY +LI CK +
Sbjct: 333 VNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDK 392
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVI 437
YE LD+M QK P+++++ ++ + +K EE+ ++E M + GC + YN +
Sbjct: 393 AYEILDDMIQKGHD--PSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTM 450
Query: 438 LKLYVNW-DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++L D ++ VR W EM+ G+ P +Y +M+HG +G L +A YF EM +G
Sbjct: 451 IRLVCKLGDLKEAVR-LWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERG 509
Query: 497 MVPEPRTGILVNDMNIKLK 515
++ P+ G L N L+
Sbjct: 510 LLSAPQYGTLKELTNALLR 528
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 219/438 (50%), Gaps = 17/438 (3%)
Query: 73 LANSDEKSEFQRYPGDEIAINVQNILKTCSV-------STKGEIEKALNQCELTLTDDLI 125
LA SDE + A N + + + C+ +E AL+ L + ++
Sbjct: 140 LAASDEDQGSSEQ--EAAASNPEGVDRVCAAIADVVASGADANLEAALSALSPPLCEAVV 197
Query: 126 VNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--P 183
+ V++R++ +Y FF+W + G ++ + + +L +LG+ R+F ++ + EM
Sbjct: 198 LAVLHRFKHAHRPSYRFFRWATVSGGFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKA 257
Query: 184 DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE 243
++ + + + +AAA ++ A+GVF+ ++ G D + +F LL+ L + A
Sbjct: 258 GALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREAR 317
Query: 244 TFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
F+ ++ D+++ ++ WC N+ EA R W ++++ +PD V + T + L
Sbjct: 318 QVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLL 377
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
+ + A+++F+ M KG P+V T +I C + ++ A+E EM+ C P+V
Sbjct: 378 RGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVA 437
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLE 420
TY L+ K+M+ V L+EM QK C P+ T+N L+K L P++ + +
Sbjct: 438 TYTCLLVGYGNAKQMDRVTAVLEEMTQKG--CPPDARTYNALIKLLTNRNMPDDAARIYK 495
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVR-HTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+M + G + + TYN+++K Y D + WEEM ++G+ PD SYTV I+
Sbjct: 496 KMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINRHIRH 555
Query: 480 GRLEDALSYFHEMRLKGM 497
GR E+A Y EM KGM
Sbjct: 556 GRPEEAYKYIEEMINKGM 573
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 130/337 (38%), Gaps = 64/337 (18%)
Query: 102 SVSTKGEIEKALNQCELTLTD---------DLIVNVINRYRFDWEAAYTFFKWVSREGDY 152
S + GEI+ A+ EL + + ++ + + EA F K G Y
Sbjct: 271 SFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKM---HGQY 327
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + A++ AR VE +V++EM PD+V T ++ E
Sbjct: 328 SPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNT---MIEGLLRGQRRPE 384
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A+ +F+ K G ++ + L+ C+ +++A E F E ++ + D+ T +L
Sbjct: 385 AVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLV 444
Query: 266 GWCVLGNVYEAKRF---WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ------ 316
G+ GN + R +++ + C PD+ TY + LT + A R+++
Sbjct: 445 GY---GNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKG 501
Query: 317 --------------------------AMWE----KGRKPDVVTCNCIIDALCFKKRIPEA 346
A+WE +G PDV + I+ R EA
Sbjct: 502 LEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINRHIRHGRPEEA 561
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+ + EM N+G YN K + + ++E
Sbjct: 562 YKYIEEMINKGMKAPQIDYNKFAADFSKAGKPDILFE 598
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 219/414 (52%), Gaps = 12/414 (2%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSRE--GDYSP 154
++ +C ++ E+E L+ +L +T D+ V+ R AY FF+W ++ G +
Sbjct: 44 LIISCQKASGLELE--LDHSDLRVTPDVAERVLERLDNAGMLAYRFFEWARKQKRGGCNH 101
Query: 155 GSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
++ ++ L + R++ + V M +VN +T+GI++ +YA A +EA+ F+
Sbjct: 102 TIRSYHTVVASLAKIRQYQLMWDVVAIMRREGVVNVETFGIIMRKYARAQKFDEAVYTFN 161
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGN 272
+++G + +L+AF +LL LC+ K+V A+ F+ F D KT +I+L GW N
Sbjct: 162 IMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGRFNPDAKTYSILLEGWGKAPN 221
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+ + + + +++ + C+PD VTY V++L K G++ A+ + Q M +G +P +
Sbjct: 222 LPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSV 281
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
++ + RI +A+ +M+ G +P+V YN+L+ CK+K+ E + +D+ME
Sbjct: 282 LVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHG 341
Query: 393 GSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
+ PN T+N +L SL K +E V RM + C+ +DTY +++K++ D +
Sbjct: 342 IA--PNSRTWNIILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDNVEM 398
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
W+ M K P +++V+I+GL DKG + A +M KG+ P T
Sbjct: 399 ALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGST 452
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 116/240 (48%), Gaps = 5/240 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGV 210
P + ++D L + R E + V +M + T Y +L++ Y +E+A+
Sbjct: 239 PDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVAT 298
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCV 269
F ++ G + D+ + L+ C+ K E A + E + + +T NIILN
Sbjct: 299 FLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILNKLIS 358
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
LG EA R ++ +IK +C+PDS TY + + + AL++++ M K P + T
Sbjct: 359 LGKDDEAYRVFRRMIK-RCQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFLPSMHT 417
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ +I+ LC K + +A +L +M +G P +T+ L + L K R + + +D+M+
Sbjct: 418 FSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKMK 477
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 9/222 (4%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ + + K A+ F M + G P++ N ++ ALC K + +A E+ +M
Sbjct: 139 TFGIIMRKYARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKM 198
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP- 412
R P+ TY+ L++ K + + E EM + C P+ +T+ ++ SL K
Sbjct: 199 NGRFN-PDAKTYSILLEGWGKAPNLPKMREVYSEM--LDAGCQPDIVTYGIMVDSLCKTG 255
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLY-VNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
EE V++ M GC+ +T Y+V++ Y V ED V T+ +MEK G+ PD Y
Sbjct: 256 RVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAV-ATFLDMEKDGIVPDVVVY 314
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
++ + E+A +M G+ P RT I++N +
Sbjct: 315 NALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILNKL 356
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 225/440 (51%), Gaps = 13/440 (2%)
Query: 88 DEIAINVQN---ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFK 144
DE A +V+ IL+ S ++E ALN+ + L LI V+NR Y FF
Sbjct: 77 DEFASDVEKSYRILRKFH-SRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFV 135
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAA 200
W +++ Y V+ +++ +L + R+F + + +EM P L+ + + +L+ R+A+
Sbjct: 136 WAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFAS 195
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM 260
A MV++AI V D +FG D F LL LC++ V+ A FE + F +++
Sbjct: 196 ADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYF 255
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+L GWC +G + EAK + ++ EPD V Y ++ GK+ A L + M
Sbjct: 256 TSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRR 315
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G +P+ +I ALC R+ EA++V EM+ C +V TY +L+ CK +++
Sbjct: 316 RGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDK 375
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER-NGCKMSTD--TYNVI 437
Y LD+M +K +P+E+T+ +++ + +K E LE ME+ + D YNV+
Sbjct: 376 CYIVLDDMIKKG--LMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVV 433
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
++L + W EME+ G+ P ++ +MI+GL +G L +A +F EM +G+
Sbjct: 434 IRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Query: 498 VPEPRTGILVNDMNIKLKER 517
+ G L +N LK++
Sbjct: 494 FSVSQYGTLKLLLNTVLKDK 513
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 135/322 (41%), Gaps = 35/322 (10%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V+ Y LL+ YA A + +A + + G + + + L+ LC+ +E A
Sbjct: 285 PDIVD---YTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEA 341
Query: 243 -ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ F E E+ E D+ T +++G+C G + + D+IK P +TY + A
Sbjct: 342 MKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA 401
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
KK L L + M + PD+ N +I C + EA+ + EM+ G P
Sbjct: 402 HEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPG 461
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER 421
V T+ +I L + ++ EM + + T LL ++ K +++
Sbjct: 462 VDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKL------ 515
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
+M+ D ++ I CE V S+T+ IH L+ KG
Sbjct: 516 ------EMAKDVWSCITS---KGACELNV----------------LSWTIWIHALFSKGY 550
Query: 482 LEDALSYFHEMRLKGMVPEPRT 503
++A SY EM +P+P T
Sbjct: 551 EKEACSYCIEMIEMDFMPQPDT 572
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 200/400 (50%), Gaps = 10/400 (2%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
++E +LN L+ +L+ V+ R + +A+ FF W + F+ ++++LG
Sbjct: 63 DLELSLNPFSAQLSTNLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVMSFHILVEILG 122
Query: 168 RARRFVELIQVFDEMPDL----VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
++F L EM + +N + + ++ Y+ A++ + AI F+R EFG +
Sbjct: 123 SCKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTI 182
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
LL LC+ KHV+ A+ F KN F KT +I+++GW +G+ +A ++ +
Sbjct: 183 HDLDKLLFILCKRKHVKQAQQLFHQAKNRFSLTAKTYSILISGWGEIGDSEKACDLFQAM 242
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
++ C D + Y + AL K G++ A +F M K +PD T + I + C +
Sbjct: 243 LEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDV 302
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
A VL +M+ LPNV TYN +IK LCK + +E Y+ LDEM + P+ ++N
Sbjct: 303 QSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVK--PDTWSYN 360
Query: 404 YLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
+ EV L RME++ C TYN++LKL + DKV WE M K
Sbjct: 361 AIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDK 420
Query: 461 GMGPDQRSYTVMIHGL-YDKGRLEDALSYFHEMRLKGMVP 499
P +Y+VMIHG KG+LE+A YF M +G+ P
Sbjct: 421 KFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPP 460
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 224/443 (50%), Gaps = 12/443 (2%)
Query: 90 IAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSRE 149
IA + + K + IE LN + ++ L++ V+ + A +FF+W ++
Sbjct: 79 IAQDTGKLCKLLCTHSNSSIESLLNGASVDVSPTLVLEVLKKLSNSGVIALSFFRWAEKQ 138
Query: 150 GDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEEA 207
+ + +NA+++ LG+ ++F + + ++M L+ ++T+ ++ RYA A V+EA
Sbjct: 139 KGFKYSTENYNALIEALGKIKQFKMIWNLVNDMRSKGLLTQETFALISRRYARARKVKEA 198
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNG 266
+ F++ ++FG LS F LL LC+ +HVE A+ F+ K+ +F DIK+ I+L G
Sbjct: 199 VETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEG 258
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
W N+ ++++ EPD+VTY +NA K + A+ LF M P
Sbjct: 259 WGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPT 318
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+I+ L ++R+ EAL+ K G P TYN+++ C+ RM+ Y +D
Sbjct: 319 PHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVD 378
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN-GCKMSTDTYNVILKLYV 442
EM + P T++ +L L ++ +E V + M GC+ S TY ++++++
Sbjct: 379 EM--RKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFC 436
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
N + D W+EM+ KG+ P ++ +I+ L + +L++A YFHEM G+ P
Sbjct: 437 NEERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRP--- 493
Query: 503 TGILVNDMNIKLKERGEQGKKVI 525
+ +++ L + G+Q +I
Sbjct: 494 PAAMFSNLKQTLLDEGKQDMVLI 516
>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 202/403 (50%), Gaps = 16/403 (3%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG- 167
+EK L+Q L LT DL++NV+ R F+ + ++ FF W + +YS +N ++D+L
Sbjct: 16 LEKTLDQLGLELTTDLVLNVLGRLHFEEKTSFRFFMWAGHQKNYSHEPCAYNEMIDILTS 75
Query: 168 ---RARRFVELIQVFDEMP----DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
+AR+F + + D M ++V + +L Y ++ +R
Sbjct: 76 TKYKARQFRIVCDMLDYMKRNNKNVVPVEVLLTILRNYTEKYLTRVQKFAKKKRIRVKTQ 135
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
+++AF LL LC+ E AE F+ KN+ D T N++ GWC + N +
Sbjct: 136 PEINAFNLLLDALCKCCLAEDAEGLFKRVKNKVKPDANTYNVMFFGWCRVRNPTRGMKVL 195
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR---KPDVVTCNCIIDAL 337
+++I+ PDS TY T ++A + G + A LF+ M KG P T +I AL
Sbjct: 196 EEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGAL 255
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
R+ E ++L +M N GCLP+V+T+ LI+ +C +++ Y +L EM K P
Sbjct: 256 VRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYP--P 313
Query: 398 NEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+ +T+N LK L K EE + ERM GC S T+N+++ ++ D TW
Sbjct: 314 DIVTYNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETW 373
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
EM+K+G D +Y VMI GL+ ++EDA ++ KGM
Sbjct: 374 YEMDKRGCAQDVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGM 416
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 123/294 (41%), Gaps = 11/294 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLV--NEKTYGILLNRYAAAHMVEEAIGVF 211
P N FN +LD L + + +F + + V + TY ++ + + V
Sbjct: 136 PEINAFNLLLDALCKCCLAEDAEGLFKRVKNKVKPDANTYNVMFFGWCRVRNPTRGMKVL 195
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY----DIKTMNIILNGW 267
+ + G D + + CR V A FE + + KT I++
Sbjct: 196 EEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGAL 255
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
+ E + +D+I S C PD T+ + + GK+ A R Q M KG PD+
Sbjct: 256 VRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPDI 315
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT NC + LC K EAL + M GC P+V T+N LI ++ + +E E
Sbjct: 316 VTYNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETWYE 375
Query: 388 MEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
M+++ C + T+ ++ L K E+ +++E + G K+ ++ L
Sbjct: 376 MDKR--GCAQDVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQKFDSFL 427
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 112/266 (42%), Gaps = 9/266 (3%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMP------DLVNEKTYGILLNRYAAAHMVE 205
++P S + +D RA E ++F+ M KTY I++ + ++
Sbjct: 203 HTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGALVRNNRMD 262
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNII 263
E + + G L D+S F+ L+ +C ++ A F + N+ GY DI T N
Sbjct: 263 ECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNK-GYPPDIVTYNCF 321
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L C N EA R ++ +I++ C P T+ ++ + G A + M ++G
Sbjct: 322 LKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETWYEMDKRGC 381
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
DV T +ID L ++ +A ++ ++ N+G ++S + L I + ++
Sbjct: 382 AQDVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQKFDSFLMQLSVIGNIRAIHR 441
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL 409
+ M + + N KS+
Sbjct: 442 LSEHMRTFHNPSMARRYVLNQKRKSM 467
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 9/183 (4%)
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+P++ N ++DALC +A + + +KN+ P+ TYN + C+++ +
Sbjct: 135 QPEINAFNLLLDALCKCCLAEDAEGLFKRVKNK-VKPDANTYNVMFFGWCRVRNPTRGMK 193
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT---YNVI 437
L+EM Q + P+ T+ + + + E + E M G MS+ T Y ++
Sbjct: 194 VLEEMIQLGHT--PDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIM 251
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ V + D+ E+M G PD ++ +I G+ G++++A + EM KG
Sbjct: 252 IGALVRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGY 311
Query: 498 VPE 500
P+
Sbjct: 312 PPD 314
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 222/442 (50%), Gaps = 13/442 (2%)
Query: 88 DEIAINVQNILKTCS--VSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
DE A +V+ + + S ++E AL + +T+ L V+NR Y FF W
Sbjct: 70 DEFAKDVEKVYRILRNFHSRVPKLELALQESGVTMRAGLTERVLNRCGDAGNLGYRFFVW 129
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD----LVNEKTYGILLNRYAAA 201
S++ Y + A++ + + R+F + + +EM L+ + + +L+ R+A+A
Sbjct: 130 ASKQPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSELFIVLIRRFASA 189
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
+VE+AI V D ++G D F LL LC+ V+ A + FE + F ++
Sbjct: 190 RLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMRVRFSPSLRHFT 249
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+L GWC G + EAK + ++ EPD V + ++A + GK+ A L + M K
Sbjct: 250 SLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRK 309
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G +P+ + +I A C ++++ EA+ V EM+ GC +V TY +LI CK ++
Sbjct: 310 GCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFCKWGKINRG 369
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVIL 438
Y+ LD M+QK +PN++T+ +L + ++ EE ++E M GC YNV++
Sbjct: 370 YQILDAMKQKGH--MPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPDLSIYNVVI 427
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+L + W EME P+ ++ +MIHG +G L +A YF EM +G++
Sbjct: 428 RLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEYFKEMIGRGLL 487
Query: 499 PEPRTGILVNDMNIKLKERGEQ 520
P+ GIL +N L RGE+
Sbjct: 488 TTPQYGILKELLNALL--RGEK 507
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 101/226 (44%), Gaps = 3/226 (1%)
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
G+ R +++ + + N+ TY +L + +EE + + + + G + DLS +
Sbjct: 364 GKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPDLSIY 423
Query: 227 QNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
++ C+ V + + + E E ++F ++ T I+++G+ G + EA ++K++I
Sbjct: 424 NVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEYFKEMIG 483
Query: 286 SK--CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
P +NAL + KLG A ++ + KG + + I +L +
Sbjct: 484 RGLLTTPQYGILKELLNALLRGEKLGMAKDVWSCIVTKGCELNADAWTIWIHSLFSNGHV 543
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
EA +M +P T+ L++ L K+ E E ++++
Sbjct: 544 KEACSYCLDMMEADIMPKPETFAKLMRGLRKLYNREFAAEITEKIK 589
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 223/442 (50%), Gaps = 13/442 (2%)
Query: 88 DEIAINVQNILKTCSV--STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
DE A +V+ + + S ++E AL + + L + L V+NR AY FF W
Sbjct: 45 DEFASDVEKVYRLLRKFHSRVPKLELALQESGVVLRNGLTERVLNRCGDAGILAYKFFVW 104
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAA 201
S++ Y + A++ VL + ++F + + +EM L+ + + +++ R+A++
Sbjct: 105 ASKQPCYRHCYENYKAMIKVLSKMKQFGAVWALLEEMRRDNSVLITSEVFVVVMRRFASS 164
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
MV +AI V D ++G D F LL LC+ V+ A + FE + F +K
Sbjct: 165 RMVNKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFSPSLKHFT 224
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+L GWC G + EAK + ++ EPD V Y ++ GK+G A L + + K
Sbjct: 225 CLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRK 284
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P+ + +I ALC ++++ EA+ V EM+ GC +V TY +L+ CK + ++
Sbjct: 285 GCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGFCKWRMIDKG 344
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVIL 438
Y+ L M QK +PN++T+ +L+ + ++ EE ++ M++ GC YNV++
Sbjct: 345 YQILQSMIQKGH--MPNQLTYLHLMLAHEKKEELEECKELMGEMQKIGCIPDLSIYNVVI 402
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+L + W EME G+ P ++ +MI+G G L +A YF EM +G++
Sbjct: 403 RLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKEMVERGLL 462
Query: 499 PEPRTGILVNDMNIKLKERGEQ 520
+ GIL + +N L RGE+
Sbjct: 463 SSRQYGILKDLLNALL--RGEK 482
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 210/403 (52%), Gaps = 18/403 (4%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR----EGDYSPGSNVFNAIL 163
+E AL L++ L++ V++R++ ++ FF+W + G ++ + + ++
Sbjct: 169 SLEAALTALSPPLSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMV 228
Query: 164 DVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
+LG+AR+F ++ + EM + + I + +AAA ++ A+GVF+ + G D
Sbjct: 229 HILGKARQFQSMVALIQEMGKEGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDD 288
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ +F LL+ L + A F+ ++ + D+++ ++ WC N+ EA R W
Sbjct: 289 GVESFNCLLVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWN 348
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+++++ +PD V + T + L + + A+++F+ M KG P+V T +I C +
Sbjct: 349 EMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRG 408
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
++ A+ EM++ GC P+V TY L+ KRM+ V L+EM QK C P+ T
Sbjct: 409 KMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQK--GCPPDGRT 466
Query: 402 FNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYV----NWDCEDKVRHTW 454
+N L+K L P++ + ++M + G + + TYN+++K Y N+ V W
Sbjct: 467 YNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAV---W 523
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
EEM +KG+ PD SYTV I+G GR E+A Y EM KGM
Sbjct: 524 EEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGM 566
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 125/335 (37%), Gaps = 60/335 (17%)
Query: 102 SVSTKGEIEKALNQCELTLT---DD------LIVNVINRYRFDWEAAYTFFKWVSREGDY 152
S + GEI+ A+ E+ T DD ++ + + EA F + R Y
Sbjct: 264 SFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR---Y 320
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + A++ AR VE +V++EM PD+V T ++ E
Sbjct: 321 APDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNT---MIEGLLRGQRRPE 377
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
A+ +F+ K G ++ + L+ C+ +++A FE E + G D+ T +L
Sbjct: 378 AVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFE-EMQDVGCQPDVATYTCLL 436
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ-------- 316
G+ + +++ + C PD TY + LT + A R+++
Sbjct: 437 VGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLE 496
Query: 317 ------------------------AMWE----KGRKPDVVTCNCIIDALCFKKRIPEALE 348
A+WE KG PDV + I+ R EA +
Sbjct: 497 PTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACK 556
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+ EM +G YN K + + +YE
Sbjct: 557 YIEEMIQKGMKTPQIDYNKFAADFSKAGKPDILYE 591
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 210/403 (52%), Gaps = 18/403 (4%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR----EGDYSPGSNVFNAIL 163
+E AL L++ L++ V++R++ ++ FF+W + G ++ + + ++
Sbjct: 169 SLEAALTALSPPLSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMV 228
Query: 164 DVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
+LG+AR+F ++ + EM + + I + +AAA ++ A+GVF+ + G D
Sbjct: 229 HILGKARQFQSMVALIQEMGKEGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDD 288
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ +F LL+ L + A F+ ++ + D+++ ++ WC N+ EA R W
Sbjct: 289 GVESFNCLLVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWN 348
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+++++ +PD V + T + L + + A+++F+ M KG P+V T +I C +
Sbjct: 349 EMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRG 408
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
++ A+ EM++ GC P+V TY L+ KRM+ V L+EM QK C P+ T
Sbjct: 409 KMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKG--CPPDGRT 466
Query: 402 FNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYV----NWDCEDKVRHTW 454
+N L+K L P++ + ++M + G + + TYN+++K Y N+ V W
Sbjct: 467 YNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAV---W 523
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
EEM +KG+ PD SYTV I+G GR E+A Y EM KGM
Sbjct: 524 EEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGM 566
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 120/326 (36%), Gaps = 60/326 (18%)
Query: 102 SVSTKGEIEKALNQCELTLT---DD------LIVNVINRYRFDWEAAYTFFKWVSREGDY 152
S + GEI+ A+ E+ T DD ++ + + EA F + R Y
Sbjct: 264 SFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR---Y 320
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + A++ AR VE +V++EM PD+V T ++ E
Sbjct: 321 APDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNT---MIEGLLRGQRRPE 377
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
A+ +F+ K G ++ + L+ C+ +++A FE E + G D+ T +L
Sbjct: 378 AVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFE-EMQDVGCQPDVATYTCLL 436
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ-------- 316
G+ + +++ + C PD TY + LT + A R+++
Sbjct: 437 VGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLE 496
Query: 317 ------------------------AMWE----KGRKPDVVTCNCIIDALCFKKRIPEALE 348
A+WE KG PDV + I+ R EA +
Sbjct: 497 PTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACK 556
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCK 374
+ EM +G YN K
Sbjct: 557 YIEEMIQKGMKTPQIDYNKFAADFSK 582
>gi|122236160|sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g13420, mitochondrial; Flags: Precursor
gi|110738270|dbj|BAF01064.1| hypothetical protein [Arabidopsis thaliana]
Length = 509
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 212/410 (51%), Gaps = 18/410 (4%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E +L ++LT +LI + R R + + A +FF+++ S FN I+D+LGR
Sbjct: 58 MESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGR 117
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD--LSAF 226
R+F + Q+ EM D + +T+ IL+ R AA + +A+ FD F E L F
Sbjct: 118 VRQFDVVRQLIVEM-DQTSPETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRRFRLVEF 176
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
LL LC+Y + ++A F K EFG D K I++ GWC L + A++F ++I+S
Sbjct: 177 GFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIES 236
Query: 287 KCEPDSVTYATFVNALTKKGKLG----------TALRLFQAMWEKGRKPDVVTCNCIIDA 336
EP+ VTY +N + + L A ++F M ++G +PDV + + ++
Sbjct: 237 GIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSIVLHM 296
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
+ L+ ++ MK +G P + TY S++K LC R+E E L+ M + S
Sbjct: 297 YSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGIS-- 354
Query: 397 PNEITFNYLLKSLKKPEEVPWV--LERMERNG-CKMSTDTYNVILKLYVNWDCEDKVRHT 453
P+ T+N K K ++ L R +NG CK ST TYNV+L ++N + V+
Sbjct: 355 PSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEI 414
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
W++++ GPD SYT ++HGL K + ++A YF EM +G +P+ T
Sbjct: 415 WDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLT 464
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 16/214 (7%)
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+VFDEM PD+ ++ I+L+ Y+ AH E + K G + + +++
Sbjct: 273 KVFDEMRQRGIEPDVT---SFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVV 329
Query: 231 LWLCR----YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
LC + E+ ET ES + T N + + A ++ +
Sbjct: 330 KCLCSCGRLEEAEELLETMVESGISP---SSATYNCFFKEYKGRKDANGAMNLYRKMKNG 386
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
C+P + TY + GK+ T ++ + PD+ + ++ LC K++ EA
Sbjct: 387 LCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEA 446
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
EM RG LP T+ +L K L + +M T
Sbjct: 447 CGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRT 480
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 207/409 (50%), Gaps = 10/409 (2%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSRE--GDYSPGSNVF 159
S +E L+ + +T ++ V+ R AY FF+W R+ G + +
Sbjct: 48 SCRKASAVEHELDHSGVRVTPEVAERVLERLDNAGMLAYRFFEWARRQKRGGCAHTVRSY 107
Query: 160 NAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF 217
+ ++ L + R++ + V M + N +T+ I++ +YA A +EA+ F+ + +
Sbjct: 108 HTVVASLAKIRQYQLMWDVVAVMRKEGVANVETFSIIMRKYARAQKFDEAVYTFNIMERY 167
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
G +L+AF +LL LC+ K+V A+ F+ N F D KT +I+L GW N+ + +
Sbjct: 168 GVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPNLPKMR 227
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+ D++ + C+PD VTY V+AL K G++ A+ + Q M +G +P + ++
Sbjct: 228 EVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTY 287
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
RI +A+ +M+ G +P+V YN+L+ CK+K+ + + +D+ME S P
Sbjct: 288 GVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGIS--P 345
Query: 398 NEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N T+N +L SL K +E V M + CK +DTY +++K++ D + W
Sbjct: 346 NSRTWNIILNTLISLGKDDEAYRVFRNMIKR-CKPDSDTYTMMIKMFCENDKIEMALKVW 404
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ M K P +++V+I+GL DKG + A +M KG+ P T
Sbjct: 405 KYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGST 453
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 118/240 (49%), Gaps = 5/240 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGV 210
P + ++D L + R E + V +M + T Y +L++ Y +E+A+
Sbjct: 240 PDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVAT 299
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCV 269
F ++ G + D+ + L+ C+ K + A + E + + +T NIILN
Sbjct: 300 FLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLIS 359
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
LG EA R ++++IK +C+PDS TY + + K+ AL++++ M K P + T
Sbjct: 360 LGKDDEAYRVFRNMIK-RCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHT 418
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ +I+ LC K + +A +L +M +G P +T+ L + L K R + + +++M+
Sbjct: 419 FSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMK 478
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 9/222 (4%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T++ + + K A+ F M G ++ N ++ ALC K + +A E+ +M
Sbjct: 140 TFSIIMRKYARAQKFDEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKM 199
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP- 412
NR P+ TY+ L++ + + + E +M C P+ +T+ ++ +L K
Sbjct: 200 NNRFS-PDAKTYSILLEGWGRAPNLPKMREVYSDMLA--AGCQPDIVTYGIMVDALCKTG 256
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLY-VNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
EE V++ M GC+ +T Y+V++ Y V+ ED V T+ +MEK G+ PD Y
Sbjct: 257 RVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAV-ATFLDMEKDGIVPDVVVY 315
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
++ + ++A +M G+ P RT I++N +
Sbjct: 316 NALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTL 357
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 200/400 (50%), Gaps = 10/400 (2%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
++E +LN ++ +L+ V+ R +A+ FF W + F+ ++++LG
Sbjct: 63 DLELSLNPFSAQISTNLVDQVLKRCNNLGFSAHRFFLWAKSIPGFQHSVMSFHILVEILG 122
Query: 168 RARRFVELIQVFDEMPDL----VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
++F L EM +N + + ++ Y+ A++ + AI F+R EFG +
Sbjct: 123 SCKQFAILWDFLIEMRGSCHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGIKPTI 182
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
+ F LL LC+ KHV+ A+ FF+ KN F KT +I+++GW +G+ +A ++ +
Sbjct: 183 NDFDKLLFILCKTKHVKQAQQFFDQAKNRFLLTAKTYSILISGWGDIGDSEKAHELFQAM 242
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
++ C D + Y + AL K G + A +F M K +PD T + I + C +
Sbjct: 243 LEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDV 302
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
AL VL +M+ LPNV TYN +IK LCK + +E Y LDEM + P+ ++N
Sbjct: 303 QSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISR--GVRPDTWSYN 360
Query: 404 YLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
+ EV + RME++ C TYN++LKL + DKV W M K
Sbjct: 361 AIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTKVWGNMGDK 420
Query: 461 GMGPDQRSYTVMIHGLY-DKGRLEDALSYFHEMRLKGMVP 499
P +Y+VMIHG KG+LE+A YF M +G+ P
Sbjct: 421 KFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPP 460
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 207/410 (50%), Gaps = 14/410 (3%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
I + +E L+ L++ L++ V++R++ + FF+W + ++
Sbjct: 179 IADVMAAGADANLEATLSALSPPLSEALVLAVLDRFKHAHRPSRRFFQWAAASDEFEHTP 238
Query: 157 NVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
+ +L +LG+AR+F ++ + EM + + I + +AAA ++ A+GVF+
Sbjct: 239 VTYCKMLHILGKARQFETMVALVQEMGKAGALCMDAFKIAIKSFAAAGEIKNAVGVFEMM 298
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVY 274
+ G D + +F LL+ L + + A F+ ++++ D+++ ++ WC N+
Sbjct: 299 RVHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMRDQYTPDLRSYTALMLAWCNARNLV 358
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA R W D+++ +PD V + T ++ L + + A+++F+ M KG P+V T +I
Sbjct: 359 EAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLI 418
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
C + ++ A+ EM+ GC P V TY L+ KRM+ V L+EM QK
Sbjct: 419 RDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKG-- 476
Query: 395 CLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYV----NWDCE 447
C P+ T+N L+K L P++ + ++M G + + TYN+++K Y N+
Sbjct: 477 CPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNYAMG 536
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
V WEEM +KG+ PD SYTV I+G GR +A + EM KGM
Sbjct: 537 CAV---WEEMHRKGICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGM 583
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 106/279 (37%), Gaps = 54/279 (19%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
Y+P + A++ AR VE +V+++M PD+V T +++
Sbjct: 337 YTPDLRSYTALMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNT---MIDGLLRGQRRP 393
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKTMNII 263
EA+ +F+ K G ++ + L+ C+ +++A FE E G ++ T +
Sbjct: 394 EAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKLDMAMRCFE-EMQVAGCQPEVATYTCL 452
Query: 264 LNGWCVLGNVYEAKR---FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ---- 316
L G+ GN R +++ + C PD TY + LT + A+R+++
Sbjct: 453 LVGY---GNAKRMDRVTAMLEEMAQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMIT 509
Query: 317 ----------------------------AMWE----KGRKPDVVTCNCIIDALCFKKRIP 344
A+WE KG PDV + I+ R
Sbjct: 510 KGLEPTIHTYNMMMKSYFLGGRNYAMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPA 569
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
EA + L EM +G YN K + + +YE
Sbjct: 570 EACKFLEEMIQKGMKAPQIDYNKFAADFSKAGKPDILYE 608
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 223/439 (50%), Gaps = 13/439 (2%)
Query: 75 NSDEKSEFQRYPGDEIAINVQNILKTCSV--STKGEIEKALNQCELTLTDDLIVNVINRY 132
N +++++ +Y DE A +V+ + S ++E ALN+ + L LI V+NR
Sbjct: 67 NHNDRTKNSKY--DEFASDVEKAYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRC 124
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNE 188
Y FF W +++ Y V+ +++ +L + R+F + + +EM P L+
Sbjct: 125 GDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEP 184
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
+ + +L+ R+A+A MV++AI V D FG D F LL LC++ V+ A FE
Sbjct: 185 ELFVVLVQRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFED 244
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ F +++ +L GWC + EAK + ++ EPD V Y ++ GK+
Sbjct: 245 MRLRFPVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKM 304
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A L + M +G +P+ +I ALC R+ EA++V EM+ C +V TY +L
Sbjct: 305 ADAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTAL 364
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER-NGC 427
+ CK +++ Y LD+M +K +P+++T+ +++ + +K E++ LE ME+
Sbjct: 365 VSGFCKWGKIDKCYLVLDDMIKKG--LMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQI 422
Query: 428 KMSTD--TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
+ D YNV+++L + W EME G+ P ++ ++I+GL +G L +A
Sbjct: 423 EYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQGCLLEA 482
Query: 486 LSYFHEMRLKGMVPEPRTG 504
+F EM +G+ P+ G
Sbjct: 483 CDHFKEMVARGLFSVPQYG 501
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 148/352 (42%), Gaps = 41/352 (11%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
F ++L R + +E V +M PD+V+ Y LL+ YA A + +A +
Sbjct: 256 FTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVD---YTNLLSGYANAGKMADAYDLLK 312
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLG 271
+ G + + + L+ LC+ +E A + F E E+ E D+ T +++G+C G
Sbjct: 313 DMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWG 372
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ + D+IK P +TY + A KK KL L L + M + PD+ N
Sbjct: 373 KIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYHPDIGIYN 432
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I C + EA+ + EM+ G P T+ +I L + ++ EM +
Sbjct: 433 VVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQGCLLEACDHFKEMVAR 492
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
+P T LL +L K +++ +M+ D ++ I CE V
Sbjct: 493 GLFSVPQYGTLKLLLNTLLKDKKL------------EMAKDVWSCITS---KGSCELSV- 536
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
S+T+ IH L+ KG ++A SY EM +P+P T
Sbjct: 537 ---------------SSWTIWIHALFSKGYEKEACSYCLEMIELEFMPQPDT 573
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 210/409 (51%), Gaps = 10/409 (2%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSRE--GDYSPGSNVF 159
S +E L+ + +T ++ +V+ AY FF+W ++ G + +
Sbjct: 50 SCRKASALEHELDHSGVRVTPEIAESVLKHLDNAGMLAYRFFEWARKQKRGVCAHTVRSY 109
Query: 160 NAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF 217
+ ++ L + R++ + V M + N +T+GI++ +YA A ++EA+ F+ +++
Sbjct: 110 HTVVTSLAKIRQYQLMWDVVAIMRKEGVANVETFGIIMRKYARAQKLDEAVYTFNVMEKY 169
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
G +L+AF +LL LC+ K+V A+ F+ N F D KT +I+L GW ++ + +
Sbjct: 170 GVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPSLPKMR 229
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+ D++ + C+PD VTY V+AL K G++ A+ + Q M +G +P + ++
Sbjct: 230 EVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTY 289
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
RI +A+ +M+ G +P+V YN+LI CK+K+ E + +D+M+ S P
Sbjct: 290 GVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGIS--P 347
Query: 398 NEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N T+N +L SL K +E V M + CK +DTY +++K++ D + W
Sbjct: 348 NSRTWNIILNTLISLGKDDEAYRVFRSMIKR-CKPDSDTYTMMIKMFCENDKIEMALKVW 406
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ M K P +++V+I+GL DKG + A +M KG+ P T
Sbjct: 407 KYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGST 455
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 118/243 (48%), Gaps = 11/243 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGV 210
P + ++D L + R E + V +M + T Y IL++ Y +E+A+
Sbjct: 242 PDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAA 301
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDI----KTMNIILNG 266
F ++ G + D+ + L+ C+ K E A F + G+ I +T NIILN
Sbjct: 302 FLDMEKDGIMPDVVVYNALITAFCKVKKFENA---FRVMDDMQGHGISPNSRTWNIILNT 358
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
LG EA R ++ +IK +C+PDS TY + + K+ AL++++ M K P
Sbjct: 359 LISLGKDDEAYRVFRSMIK-RCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPS 417
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+ T + +I+ LC K + +A +L +M +G P +T+ L + L K R + + ++
Sbjct: 418 MHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDFLVE 477
Query: 387 EME 389
+M+
Sbjct: 478 KMK 480
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 9/222 (4%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ + + KL A+ F M + G ++ N ++ ALC K + +A E+ +M
Sbjct: 142 TFGIIMRKYARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKM 201
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP- 412
NR P+ TY+ L++ + + + E +M C P+ +T+ ++ +L K
Sbjct: 202 NNRFS-PDAKTYSILLEGWGRAPSLPKMREVYSDMLA--AGCQPDIVTYGIMVDALCKTG 258
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLY-VNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
EE V++ M GC+ +T Y++++ Y V+ ED V + +MEK G+ PD Y
Sbjct: 259 RVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVA-AFLDMEKDGIMPDVVVY 317
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
+I + E+A +M+ G+ P RT I++N +
Sbjct: 318 NALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTL 359
>gi|116789117|gb|ABK25122.1| unknown [Picea sitchensis]
Length = 572
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 212/426 (49%), Gaps = 5/426 (1%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
E AL+ C + +L+ ++ R ++D +AA+ F+W + DYS +V++ ++ +LG
Sbjct: 125 EARTALDDCGFIPSPNLVQKLLRRLQYDGKAAFRVFQWAGSQPDYSHTVSVYHTMISILG 184
Query: 168 RARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
R+F + + +M + +VN +T I++ RYAAAH +AI F +F D
Sbjct: 185 VHRKFDKGWGLIRKMHERAMVNRQTLMIMIKRYAAAHDARKAIKTFHAMDKFKLAADSDD 244
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC-VLGNVYEAKRFWKDII 284
F LL LCR VE AE K + + K+ N+IL GWC + +VY+ KR W+++
Sbjct: 245 FLCLLCALCRNMFVEEAEELIHFNKKCYPLETKSFNVILYGWCNIFVDVYQVKRLWEEMS 304
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
PD+ +Y T + +K GK +RL+ M +KG P++ N +I L ++ +
Sbjct: 305 NLCITPDAFSYTTVICCFSKAGKFYDVVRLYDEMKKKGFTPNLKVYNAVIYVLSKERCVK 364
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EAL + +++ G PN TY LI LC+ + E Y YLD+M + +P ++
Sbjct: 365 EALNLFNKIREMGFHPNAVTYTYLIYLLCRTWKPEEAYSYLDKMIMEGF--VPTIDIYHA 422
Query: 405 LLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
+ ++ + + ++M NGC + +TY + ++ +W + W +MEK
Sbjct: 423 FFRFVENEGAICKLFDKMFENGCAPTMETYIMSIRRCCSWSDYENAFKLWNDMEKHWFSA 482
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKV 524
D + ++++G G+ E+A + EM++ G EP+ + N+ K Q +
Sbjct: 483 DSSIHYLLLNGFLLNGKPEEACKCYREMKVNGFSLEPKIDKMFESWNVGRKHSSLQQQWK 542
Query: 525 IKLTSL 530
I SL
Sbjct: 543 ISEESL 548
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 222/454 (48%), Gaps = 21/454 (4%)
Query: 67 AQLVHSLANSDEKSEFQRY-------PGDEIAINVQNILKTCSVSTKGEIEKALNQCELT 119
+ LV +L + + F+ + P E+ + +L + K ++E L
Sbjct: 7 SSLVRALHQTPKSQSFRIFSTLLHDPPSPELVNEISRVLSD-HRNPKDDLEHTLAAYSPR 65
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
++ +L+ V+ R + A+ FF W R D+ ++ ++++LG +++F L
Sbjct: 66 VSSNLVEQVLKRCKNLGFPAHRFFLWAKRIPDFEHSLESYHILVEILGCSKQFALLWDFL 125
Query: 180 DEMPDL----VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
E + + K + I+ Y+ A++ EA F+R EFG + LL LC
Sbjct: 126 IEAREYNYFEITSKVFWIVFRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLHSLCD 185
Query: 236 YKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
KHV A+ FF+ K FG KT +I++ GW + + A++ + +++++ C D +
Sbjct: 186 RKHVNHAQEFFDKAKG-FGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLL 244
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
Y ++AL K G + A ++FQ M G KPD + I + C + A +VL M
Sbjct: 245 AYNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRM 304
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
K +PNV T+N +IK LCK ++++ Y LDEM QK + P+ T+N ++
Sbjct: 305 KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGAN--PDTWTYNSIMAYHCDHC 362
Query: 414 EV---PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
EV +L RM+R C TYN++LKL + D+V WE M ++ P +YT
Sbjct: 363 EVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMSERKFYPTVATYT 422
Query: 471 VMIHGLY-DKGRLEDALSYFHEMRLKGMVPEPRT 503
VMIHGL KG+LE+A YF M +G+ P T
Sbjct: 423 VMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTT 456
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 225/424 (53%), Gaps = 16/424 (3%)
Query: 89 EIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR 148
++A +NI K S + ++ AL+Q L ++ +++ +V+NR+R Y FF+W +
Sbjct: 67 DVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEK 126
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEE 206
+ Y ++ +++ + R++ + + + M ++N +T+ I++ +YA A V+E
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDE 186
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNG 266
AI F+ +++ +L AF LL LC+ K+V A+ FE+ ++ F D KT +I+L G
Sbjct: 187 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEG 246
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
W N+ +A+ ++++I + C PD VTY+ V+ L K G++ AL + ++M KP
Sbjct: 247 WGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPT 306
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+ ++ + R+ EA++ EM+ G +V +NSLI CK RM+ VY L
Sbjct: 307 TFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLK 366
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM+ K + PN + N +L+ L + +E V +M + C+ DTY +++K++
Sbjct: 367 EMKSKGVT--PNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMF-- 421
Query: 444 WDCEDKVRHT----WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
CE K T W+ M KKG+ P +++V+I+GL ++ + A EM G+ P
Sbjct: 422 --CEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRP 479
Query: 500 EPRT 503
T
Sbjct: 480 SGVT 483
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 119/238 (50%), Gaps = 6/238 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM-PDLVNEKT--YGILLNRYAAAHMVEEAIGV 210
P ++ ++D+L +A R E + + M P + T Y +L++ Y + +EEA+
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 329
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCV 269
F + G D++ F +L+ C+ ++ V E + + K+ NIIL
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 389
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G EA ++ +IK CEPD+ TY + +K ++ TA ++++ M +KG P + T
Sbjct: 390 RGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 448
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I+ LC ++ +A +L EM G P+ T+ L + L K +R E V ++L+E
Sbjct: 449 FSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER-EDVLKFLNE 505
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ + + K+ A+ F M + P++V N ++ ALC K + +A EV M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP- 412
++R P+ TY+ L++ K + E EM + C P+ +T++ ++ L K
Sbjct: 230 RDRFT-PDSKTYSILLEGWGKEPNLPKAREVFREM--IDAGCHPDIVTYSIMVDILCKAG 286
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+E ++ M+ + CK +T Y+V++ Y + ++ T+ EME+ GM D +
Sbjct: 287 RVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFN 346
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKK 523
+I R+++ EM+ KG+ P ++ NI L+ E+G+K
Sbjct: 347 SLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSC------NIILRHLIERGEK 393
>gi|242074540|ref|XP_002447206.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
gi|241938389|gb|EES11534.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
Length = 446
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 197/405 (48%), Gaps = 14/405 (3%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSRE--GDYSPGSNVFNAILDVLGRARRFVE-- 174
+L ++ ++ Y DW A FF W + + P + +D+LG+ F
Sbjct: 36 SLDASAVLETLSLYANDWRRALDFFHWSASPTGANLPPTAATLARAVDILGKHFEFPLAT 95
Query: 175 --LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
L+ D LLNR AAA++V++A+ FD L D ++F L+
Sbjct: 96 SLLLSHHDPEDPAFLRPALRALLNRLAAANLVDDALRAFDSTAASIGLRDEASFHLLVDA 155
Query: 233 LCRYKHVEVAETF-FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LC ++ V+ A+ F + F KT N++L GW ++ W D+ + D
Sbjct: 156 LCDHRRVDEADHLCFGKDPPPFPPGTKTHNLLLRGWAKTRAWARLRQLWFDMDRRGVAKD 215
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+Y+ +++AL K GK ++F+ M +KG + D V N I A+ + + A+ + R
Sbjct: 216 LHSYSIYMDALAKSGKPWKTFKVFKEMKQKGVRIDTVAYNTAIHAVGLAQGVDSAVRLYR 275
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+M + GC PN TYN ++K CK R + Y ++ +M + C P+ +T++ + L +
Sbjct: 276 QMVDAGCKPNTATYNGIVKLFCKEGRFKEGYAFVQQMHKTG--CKPDVLTYHCFFQFLSR 333
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
P+EV + E+M GC+ DTY +++K + W V W+ ME++G+ PD +Y
Sbjct: 334 PQEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNA 393
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKE 516
+I L KG ++ A Y EM KG+ P+PR ++ KL E
Sbjct: 394 LIDALLQKGMVDLARKYDEEMLAKGLSPKPR-----KELGTKLPE 433
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 213/400 (53%), Gaps = 8/400 (2%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E AL+Q + ++ ++ V+ R+ AY FF+W S++ +Y ++++++ L +
Sbjct: 9 LETALDQTGIRISPEIAEPVLRRFENAGMLAYRFFEWASKQRNYVHSVRAYHSMIESLAK 68
Query: 169 ARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
R++ + + + M +++N + + I++ +YA A VEEA+ F+ +++ +++AF
Sbjct: 69 IRQYQMVWDLVNAMRNKEILNVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAAF 128
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
LL LC+ K+V A+ F++ K++F D KT +I++ GW N+ +A+ ++++I S
Sbjct: 129 NGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNLPKAREIYREMIDS 188
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
C PD VTY+ V+ L K G++ A+ + + M KP + ++ + RI +A
Sbjct: 189 GCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDA 248
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
+ EM+ G + +V YN+LI CK +M+ VY L +M+ K + PN T N ++
Sbjct: 249 VSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVN--PNSRTCNIII 306
Query: 407 KSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
SL + +E + RM + C+ D+Y +I+K++ D W+ M+KK
Sbjct: 307 NSLIGRGETDEAFKIFRRMIK-VCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFV 365
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
P +++V+I+GL G A EM KG+ P T
Sbjct: 366 PSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGAT 405
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 118/239 (49%), Gaps = 8/239 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK----TYGILLNRYAAAHMVEEAIG 209
P ++ ++DVL +A R E +++ EM D N K Y +L++ Y + +E+A+
Sbjct: 192 PDEVTYSIMVDVLCKAGRVDEAVEIVKEM-DYNNCKPSSFIYSVLVHTYGVENRIEDAVS 250
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWC 268
F + G + D++A+ L+ C+ ++ V + + + +T NII+N
Sbjct: 251 TFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLI 310
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G EA + ++ +IK CEPD +Y + + +L AL++++ M +K P +
Sbjct: 311 GRGETDEAFKIFRRMIKV-CEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMH 369
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T + +I+ LC +A +L EM +G P+ T+ L +HL + + V ++L E
Sbjct: 370 TFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRL-RHLLIKEGRKDVLKFLQE 427
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 7/160 (4%)
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LK 410
K R + +V Y+S+I+ L KI++ + V++ ++ M K + N F +++ +
Sbjct: 48 KQRNYVHSVRAYHSMIESLAKIRQYQMVWDLVNAMRNKE---ILNVEAFCIIMRKYARAQ 104
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
K EE + ME+ K + +N +L K + ++ M K PD ++Y+
Sbjct: 105 KVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNM-KDQFVPDSKTYS 163
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDM 510
++I G L A + EM G +P+ T ++ D+
Sbjct: 164 ILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDV 203
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 224/420 (53%), Gaps = 16/420 (3%)
Query: 89 EIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR 148
++A +NI K S + ++ AL+Q L ++ +++ +V+NR+R Y FF+W +
Sbjct: 31 DVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEK 90
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEE 206
+ Y ++ +++ + R++ + + + M ++N +T+ I++ +YA A V+E
Sbjct: 91 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDE 150
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNG 266
AI F+ +++ +L AF LL LC+ K+V A+ FE+ ++ F D KT +I+L G
Sbjct: 151 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEG 210
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
W N+ +A+ ++++I + C PD VTY+ V+ L K G++ AL + ++M KP
Sbjct: 211 WGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPT 270
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+ ++ + R+ EA++ EM+ G +V +NSLI CK RM+ VY L
Sbjct: 271 TFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLK 330
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM+ K + PN + N +L+ L + +E V +M + C+ DTY +++K++
Sbjct: 331 EMKSKGVT--PNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMF-- 385
Query: 444 WDCEDKVRHT----WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
CE K T W+ M KKG+ P +++V+I+GL ++ + A EM G+ P
Sbjct: 386 --CEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRP 443
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 119/238 (50%), Gaps = 6/238 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM-PDLVNEKT--YGILLNRYAAAHMVEEAIGV 210
P ++ ++D+L +A R E + + M P + T Y +L++ Y + +EEA+
Sbjct: 234 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 293
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCV 269
F + G D++ F +L+ C+ ++ V E + + K+ NIIL
Sbjct: 294 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 353
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G EA ++ +IK CEPD+ TY + +K ++ TA ++++ M +KG P + T
Sbjct: 354 RGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 412
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I+ LC ++ +A +L EM G P+ T+ L + L K +R E V ++L+E
Sbjct: 413 FSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER-EDVLKFLNE 469
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ + + K+ A+ F M + P++V N ++ ALC K + +A EV M
Sbjct: 134 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 193
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP- 412
++R P+ TY+ L++ K + E EM + C P+ +T++ ++ L K
Sbjct: 194 RDRFT-PDSKTYSILLEGWGKEPNLPKAREVFREM--IDAGCHPDIVTYSIMVDILCKAG 250
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+E ++ M+ + CK +T Y+V++ Y + ++ T+ EME+ GM D +
Sbjct: 251 RVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFN 310
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKK 523
+I R+++ EM+ KG+ P ++ NI L+ E+G+K
Sbjct: 311 SLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSC------NIILRHLIERGEK 357
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 13/408 (3%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
+ ++E +L ++ DL+ V+ R +A+ FF W + F+ ++++
Sbjct: 57 RHDLELSLTPFSTQISTDLVEQVLKRCNHLGFSAHRFFLWAKSIPGFQHSVQSFHILVEI 116
Query: 166 LGRARRFVELIQVF------DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGE 219
LGR+++F L D + NE + I+ Y+ A + + AI F R EFG
Sbjct: 117 LGRSKQFAILWDFLIETRESDSSCKITNE-IFWIIFTAYSRADLPDGAIRSFVRMDEFGI 175
Query: 220 LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
+ LL LC+ KHV A+ FF+ K+ F KT +I++NGW +G+ +A+
Sbjct: 176 KPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLTTKTYSILINGWGKIGDSGKAREL 235
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
+ +++ C D + Y + AL K G + A+ M K +PD T + I + C
Sbjct: 236 FDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCD 295
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ A VL +M+ LPNV TYN +IK LCKIK++E Y+ LDEM + P+
Sbjct: 296 ANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEM--ISSGLKPDT 353
Query: 400 ITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
++N + EV L+ RME++ C TYN++LKL + DK WE
Sbjct: 354 WSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVWEC 413
Query: 457 MEKKGMGPDQRSYTVMIHGLY-DKGRLEDALSYFHEMRLKGMVPEPRT 503
M K P +Y+VMIHGL KG+LE+A YF M +G+ P T
Sbjct: 414 MGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDTT 461
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 114/289 (39%), Gaps = 43/289 (14%)
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK-----SKCEPDSVTYATFVNALTKKGK 307
F + +++ +I++ +LG + W +I+ S C+ + + A ++
Sbjct: 103 FQHSVQSFHILVE---ILGRSKQFAILWDFLIETRESDSSCKITNEIFWIIFTAYSRADL 159
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
A+R F M E G KP ++ + ++ LC KK + +A + ++K+ L TY+
Sbjct: 160 PDGAIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLL-TTKTYSI 218
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC 427
LI KI E D M ++ C + + +N LL++L K V
Sbjct: 219 LINGWGKIGDSGKARELFDAMLEQG--CHVDLLAYNNLLEALCKGGHV------------ 264
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
D+ +M K + PD +Y++ I D + A
Sbjct: 265 --------------------DEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFG 304
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
+MR ++P T + K+K+ E + + ++ S GLK +
Sbjct: 305 VLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDT 353
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 210/409 (51%), Gaps = 10/409 (2%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSRE--GDYSPGSNVF 159
S +E L+ + +T D+ V+ R AY FF+W R+ G + +
Sbjct: 45 SCRKASAVEHELDHSGVRVTPDVAERVLERLDNAGMLAYRFFEWARRQKRGGCAHTVRSY 104
Query: 160 NAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF 217
+ ++ L + R++ + V M VN +T+GI++ +YA A V+EA+ F+ +++
Sbjct: 105 HTVVASLAKIRQYQLMWDVVAVMRREGAVNVETFGIIMRKYARAQKVDEAVYTFNVMEKY 164
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
G + +L+AF +LL LC+ K+V A+ F+ + F D KT +I+L GW N+ + +
Sbjct: 165 GVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSRFSPDAKTYSILLEGWGRAPNLPKMR 224
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+ +++ + CEPD VTY V++L K G++ A+R+ Q M +G +P + ++
Sbjct: 225 EVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTY 284
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
+ RI +A+ +M+ G +P++ YN+L+ CK K+ E + L++ME +
Sbjct: 285 GVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGIT--T 342
Query: 398 NEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N T+N +L SL + +E V RM + C+ DTY +++K++ D + W
Sbjct: 343 NSRTWNIILNHLISLGRDDEAYKVFRRMIKC-CQPDCDTYTMMIKMFCENDKVEMALKVW 401
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ M K P +++V+I+GL DK + A +M KG+ P T
Sbjct: 402 KYMRLKQFLPSMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGST 450
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 6/238 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGV 210
P + ++D L + R E ++V +M + T Y +L++ Y +E+A+
Sbjct: 237 PDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVAT 296
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCV 269
F ++ G + D+ + L+ C+ K E A + E + + +T NIILN
Sbjct: 297 FLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLIS 356
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
LG EA + ++ +IK C+PD TY + + K+ AL++++ M K P + T
Sbjct: 357 LGRDDEAYKVFRRMIKC-CQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPSMHT 415
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I+ LC K+ + +A +L +M +G P +T+ L + L K R + V ++L E
Sbjct: 416 FSVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGR-KDVLDFLVE 472
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS-- 408
R K GC V +Y++++ L KI++ + +++ + M ++ N TF +++
Sbjct: 90 RRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRREGAV---NVETFGIIMRKYA 146
Query: 409 -LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+K +E + ME+ G + +N +L K + +++M + PD +
Sbjct: 147 RAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSR-FSPDAK 205
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
+Y++++ G L + EM G P+ T GI+V+ +
Sbjct: 206 TYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSL 249
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 214/423 (50%), Gaps = 24/423 (5%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E +L ++ + L+ + R + A +FF + + + +N +LD+L +
Sbjct: 55 MESSLQLHSISFSSHLLDQTLLRLTHHSKIALSFFDYANSLPSNPISTTSYNILLDILAK 114
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF-GELDDLSAFQ 227
R+F + +M D T+ +L+ R ++ +AI FD + G + F
Sbjct: 115 VRQFDAAWHLILQM-DHKGTDTFLLLIRRLISSGRTRQAIRAFDDIEGLTGNKVGIDDFC 173
Query: 228 NLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
LL LC+Y +V+VA F K EFG D+K I++ GWC +G A+RF KD+++
Sbjct: 174 YLLDVLCKYGYVKVAVEVFNKRKEEFGVDVKIYTILIYGWCKIGRFEMAERFLKDMVERG 233
Query: 288 CEPDSVTYATFVNALTKKGKLGT----------ALRLFQAMWEKGRKPDVVTCNCIIDAL 337
EP+ VTY +N + ++ L A ++F M ++G +PDV + + ++
Sbjct: 234 IEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKRGIEPDVTSFSIVLHVY 293
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
+ +L+ L++MK G P V TY S+IK LC R+E ++EM + S P
Sbjct: 294 SRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDGENLIEEMVRSGIS--P 351
Query: 398 NEITFNYLLKSLKKPEEVPWVL---ERMERNG-CKMSTDTYNVILKLYVNWDCEDKVRHT 453
+ T+N K + ++ L ++M + C S TYN++L L++N D ++ ++
Sbjct: 352 SPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNILLALFLNLDKKETLKEL 411
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT------GILV 507
W +M++ G+GPD SYT +IHGL +K R +A +F EM +G +P+ T G++
Sbjct: 412 WNDMKESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERGFLPQKVTFEMLYRGLIQ 471
Query: 508 NDM 510
+DM
Sbjct: 472 SDM 474
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 120/284 (42%), Gaps = 25/284 (8%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILD-VLGRAR-----RFVELI----QVFDEM--- 182
+E A F K + G P +N +L+ V RA RF + I +VFDEM
Sbjct: 219 FEMAERFLKDMVERG-IEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKR 277
Query: 183 ---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV 239
PD+ ++ I+L+ Y+ AH E ++ + KE G ++ + +++ LC +
Sbjct: 278 GIEPDVT---SFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRL 334
Query: 240 EVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS-KCEPDSVTYAT 297
E E E ++ T N + + A R +K + + C P TY
Sbjct: 335 EDGENLIEEMVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNI 394
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+ K T L+ M E G PD+ + II LC K+R EA + EM RG
Sbjct: 395 LLALFLNLDKKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERG 454
Query: 358 CLPNVTTYNSLIKHLCKIKRMET---VYEYLDEMEQKNGSCLPN 398
LP T+ L + L + + T + + L+E + GS L N
Sbjct: 455 FLPQKVTFEMLYRGLIQSDMLRTWRRLKKKLEEESKTYGSELKN 498
>gi|357166306|ref|XP_003580667.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Brachypodium distachyon]
Length = 441
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 192/385 (49%), Gaps = 9/385 (2%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREG--DYSPGSNVFNAILDVLGRARRFVE----LIQV 178
++ ++ Y DW A FF W + + P + + +D+LG+ F L+
Sbjct: 37 VLETLSLYTNDWRRALDFFHWSASPAGANLPPTAATLSRAIDILGKHFEFPLATSLLLSH 96
Query: 179 FDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
D LLNR AAA++V++A+ VF+ L D ++F L+ LC ++
Sbjct: 97 HDPSDPAFLRPALRALLNRLAAANLVDDAVRVFESTAGSIGLRDEASFHLLIDALCDHRR 156
Query: 239 VEVAETF-FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
V+ A F F KT N++L GW ++ W D+ D +Y+
Sbjct: 157 VDEAHHLCFGKAPPPFPPGTKTHNLLLRGWAKTRAWTRLRQHWFDMDNRGVAKDLHSYSI 216
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+++AL K GK A+++F+ M +K D+V N I A+ + + ++ + R+M + G
Sbjct: 217 YMDALAKSGKPWKAVKVFKEMKQKRLPVDIVAYNTAIHAIGLAQGVDFSVRLYRQMVDAG 276
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW 417
C PN T+N+++K LCK R Y ++ +M + C PN +T++ + L +P+EV
Sbjct: 277 CKPNTATFNTIVKLLCKEGRFREGYAFVQQMHK--AGCEPNVLTYHCFFQYLSRPQEVLV 334
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ E+M GC+ DTY +++K + W V W+ ME++G+ PD +Y +I L
Sbjct: 335 LFEKMLERGCRPRMDTYVMLIKRFGRWGFLRPVFFVWKTMEEQGLSPDAFAYNTLIDALL 394
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPR 502
+KG ++ A Y EM KG+ P+PR
Sbjct: 395 EKGMVDLARKYDEEMLAKGLSPKPR 419
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 110/252 (43%), Gaps = 7/252 (2%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAI 208
+ PG+ N +L + R + L Q + +M + K +Y I ++ A + +A+
Sbjct: 172 FPPGTKTHNLLLRGWAKTRAWTRLRQHWFDMDNRGVAKDLHSYSIYMDALAKSGKPWKAV 231
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGW 267
VF K+ D+ A+ + + + V+ + + + + T N I+
Sbjct: 232 KVFKEMKQKRLPVDIVAYNTAIHAIGLAQGVDFSVRLYRQMVDAGCKPNTATFNTIVKLL 291
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G E F + + K+ CEP+ +TY F L++ ++ L LF+ M E+G +P +
Sbjct: 292 CKEGRFREGYAFVQQMHKAGCEPNVLTYHCFFQYLSRPQEV---LVLFEKMLERGCRPRM 348
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T +I + V + M+ +G P+ YN+LI L + ++ +Y +E
Sbjct: 349 DTYVMLIKRFGRWGFLRPVFFVWKTMEEQGLSPDAFAYNTLIDALLEKGMVDLARKYDEE 408
Query: 388 MEQKNGSCLPNE 399
M K S P +
Sbjct: 409 MLAKGLSPKPRK 420
>gi|226492862|ref|NP_001141929.1| uncharacterized protein LOC100274078 [Zea mays]
gi|194706478|gb|ACF87323.1| unknown [Zea mays]
gi|414585156|tpg|DAA35727.1| TPA: hypothetical protein ZEAMMB73_571639 [Zea mays]
Length = 442
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 196/391 (50%), Gaps = 9/391 (2%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREG--DYSPGSNVFNAILDVLGRARRFVE-- 174
+L ++ ++ Y DW A FF W + + P + +D+LG+ F
Sbjct: 32 SLDASAVLKTLSLYANDWRRALDFFHWSASPAGANLPPTAATLARAVDILGKHFEFPLAT 91
Query: 175 --LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
L+ D LLNR AAA+++++A+ F+ L D +F L+
Sbjct: 92 SLLLSHHDPGDPTFLRPALRALLNRLAAANLIDDALHAFESTAASIGLCDEVSFHILVDA 151
Query: 233 LCRYKHVEVAETF-FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LC ++ V+ A+ F + F KT N++L GW ++ W D+ + D
Sbjct: 152 LCDHRRVDEADHLCFGKDPPPFPPGTKTHNLLLRGWAKAHAWARLRQLWFDMDRRGVAKD 211
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+Y+ +++AL K GK A ++F+ M ++G + D V N I A+ + + A+ + R
Sbjct: 212 LHSYSIYMDALAKSGKPWKAFKVFKEMKQRGIRIDTVAYNTAIHAVGMAQGVDSAVRLYR 271
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+M + GC PN+ TYN++IK CK R + Y ++ +M +K G C P+ +T++ + L +
Sbjct: 272 QMVDAGCKPNIATYNAIIKLFCKEGRFKEGYAFVQQM-RKTG-CKPDVLTYHCFFQYLSR 329
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
P+EV + E+M GC+ DTY +++K + W V W+ ME++G+ PD +Y
Sbjct: 330 PQEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNA 389
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+I L KG ++ A Y +M KG+ P+PR
Sbjct: 390 LIDALLQKGMVDLARKYDEKMLAKGLSPKPR 420
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 208/415 (50%), Gaps = 10/415 (2%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
++E+ L +T L+ V+ R + +A+ FF W R + ++ ++D+LG
Sbjct: 66 DLERPLTAFSQKITPGLVEQVLKRCKNLGFSAHRFFLWAKRLPGFEHSKESYHILVDILG 125
Query: 168 RARRFVELIQVFDEMPDL----VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
+++F + +M + + + + ++ Y A++ +AI F + +FG +
Sbjct: 126 SSKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGV 185
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
LL LC+ KHV+ A+ FF+ E + KT +I++ GW +G+ EA++ ++++
Sbjct: 186 GDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEM 245
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+ C D V Y + + AL K G + A +LF+ M G PD + + I A C I
Sbjct: 246 RERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDI 305
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
A +VL M+ +PNV TYN ++K LCK ++++ Y+ LDEM ++ S P+ ++N
Sbjct: 306 HSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVS--PDLWSYN 363
Query: 404 YLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
+ EV L RME+ C TYN++LK+ + D+V W ME++
Sbjct: 364 AIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEER 423
Query: 461 GMGPDQRSYTVMIHGLY-DKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKL 514
G P +Y VM+HG KG+LE+A YF M G+ P T L+ + I L
Sbjct: 424 GFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGL 478
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 243/469 (51%), Gaps = 31/469 (6%)
Query: 44 TLIPIINLQARNSEFLFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSV 103
T+I I+N Q+R FL +A+L S SE R ++A +NI K
Sbjct: 2 TMIRILNRQSRLCSKSFL----SARLYSS-------SEQVR----DVADVAKNISKVLMS 46
Query: 104 STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAIL 163
S + I+ AL+Q L ++ +++ +V+ R+R AY FF+W ++ Y ++ ++
Sbjct: 47 SPQLVIDSALDQSGLRVSPEVVEDVLYRFRNAGLLAYRFFQWSEKQRHYEHSVRAYHMMI 106
Query: 164 DVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
+ + R++ + + + M ++N +T+ I++ +YA A V+EAI F+ +++
Sbjct: 107 ESTAKIRQYKLMWDLINAMMKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPP 166
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+L AF LL LC+ K+V A+ FE+ ++ F D KT +I+L GW N+ +A+ ++
Sbjct: 167 NLVAFNGLLSALCKSKNVRKAQEIFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFR 226
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+++ + PD VTY+ V+ L K G++ AL + ++M KP + ++ +
Sbjct: 227 EMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTET 286
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
R+ EA++ EM+ G +V +NSLI CK RM+ VY L EM+ K + PN +
Sbjct: 287 RLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVT--PNSKS 344
Query: 402 FNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT----W 454
N +L+ L + +E V +M + C+ DTY +++K++ CE K T W
Sbjct: 345 CNIILRHLIDRGEKDEAFDVFRKMIK-VCEPDADTYTMMIKMF----CEKKEMETADKVW 399
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ M KKG+ P +++V+I+GL ++ + A EM G+ P T
Sbjct: 400 KYMRKKGVFPSMHTFSVLINGLCEEPNTQKACVLLEEMIEMGIRPSGAT 448
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 6/238 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM-PDLVNEKT--YGILLNRYAAAHMVEEAIGV 210
P ++ ++D+L +A R E + + M P + T Y +L++ Y +EEA+
Sbjct: 235 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDT 294
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCV 269
F + G D++ F +L+ C+ ++ V E + + K+ NIIL
Sbjct: 295 FLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLID 354
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G EA ++ +IK CEPD+ TY + +K ++ TA ++++ M +KG P + T
Sbjct: 355 RGEKDEAFDVFRKMIKV-CEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 413
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I+ LC + +A +L EM G P+ T+ L + L K R E V ++L+E
Sbjct: 414 FSVLINGLCEEPNTQKACVLLEEMIEMGIRPSGATFGRLRQLLLKEDR-EDVLKFLNE 470
>gi|326525315|dbj|BAK07927.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 439
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 193/388 (49%), Gaps = 12/388 (3%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREG--DYSPGSNVFNAILDVLGRARRFVE----LIQV 178
+ ++ Y DW A FF W + G + P + + +D+LG+ F + L+
Sbjct: 32 VQETLSLYTNDWRRALDFFHWSASPGGGNLRPTPSTLSRAVDILGKHFEFPQATSLLLAH 91
Query: 179 FDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
D LLNR AAA++V++A+ F+ L D ++F L+ LC ++
Sbjct: 92 HDPTDPAFLRPALRALLNRLAAANLVDDAVRAFESTAASVGLRDEASFHLLIDALCDHRR 151
Query: 239 VEVAETFFESEKNEFGY----DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
V+ A + KT N++L GW ++ W D+ D +
Sbjct: 152 VDEAHHLCLGGRAAAPPPFPPGTKTHNLLLRGWAKARAWARLRQHWLDMDARGVAKDLHS 211
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y+ +++AL K GK A++LF+ M +K D+V N I A+ + + A+ + R+M
Sbjct: 212 YSIYMDALAKSGKPWKAVKLFKEMKQKRLPVDIVAYNIAIHAVGLAEGVDFAVRMYRQMI 271
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
GC PN T+N+++K LCK R + Y ++ +M + C PNE+T++ + L +P+E
Sbjct: 272 EAGCRPNTATFNTIVKLLCKEGRFKEGYAFVQQMHK--AGCEPNELTYHCFFQYLSRPQE 329
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
V + E+M + GC+ DTY +++K + W V W+ ME++G+ PD +Y +I
Sbjct: 330 VLALFEKMLQRGCRPRMDTYVMLIKRFGRWGFLRPVFFVWKTMEEQGLTPDAFAYNTLID 389
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPR 502
L +KG ++ A Y EM KG+ P+PR
Sbjct: 390 ALLEKGMVDLARKYDEEMLAKGLSPKPR 417
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 9/250 (3%)
Query: 155 GSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIGVF 211
G+ N +L +AR + L Q + +M K +Y I ++ A + +A+ +F
Sbjct: 173 GTKTHNLLLRGWAKARAWARLRQHWLDMDARGVAKDLHSYSIYMDALAKSGKPWKAVKLF 232
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKTMNIILNGWCV 269
K+ D+ A+ + + + V+ A + + E G + T N I+ C
Sbjct: 233 KEMKQKRLPVDIVAYNIAIHAVGLAEGVDFAVRMYR-QMIEAGCRPNTATFNTIVKLLCK 291
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G E F + + K+ CEP+ +TY F L++ ++ L LF+ M ++G +P + T
Sbjct: 292 EGRFKEGYAFVQQMHKAGCEPNELTYHCFFQYLSRPQEV---LALFEKMLQRGCRPRMDT 348
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+I + V + M+ +G P+ YN+LI L + ++ +Y +EM
Sbjct: 349 YVMLIKRFGRWGFLRPVFFVWKTMEEQGLTPDAFAYNTLIDALLEKGMVDLARKYDEEML 408
Query: 390 QKNGSCLPNE 399
K S P +
Sbjct: 409 AKGLSPKPRK 418
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 211/401 (52%), Gaps = 8/401 (1%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+ +ALN +++ L+ ++ R+ DW AY FKW + Y +N+++D+LG+
Sbjct: 160 VAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGK 219
Query: 169 ARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
A+ F + ++ DEM L V+ +T ++ R A A +EAI F +++G D +A
Sbjct: 220 AKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTA 279
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
L+ L + VE A F K +++ + N++++G+C + EA + ++ K
Sbjct: 280 MNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEK 339
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
S EPD ++Y F+ A ++ ++ M KG KP+V+T I+ AL K+I E
Sbjct: 340 SGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINE 399
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
AL+V +MK GC+P+ + Y+SLI L K R+ V E +++ME++ + P+ +T+N L
Sbjct: 400 ALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVT--PDVLTYNTL 457
Query: 406 LK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ + + E +L +ME CK TY+ +LK++ ++ + M K +
Sbjct: 458 ISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDV 517
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +Y +++ GL + G+L A S+F EM K MVP+ T
Sbjct: 518 SIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDST 558
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 211/401 (52%), Gaps = 8/401 (1%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+ +ALN +++ L+ ++ R+ DW AY FKW + Y +N+++D+LG+
Sbjct: 183 VAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGK 242
Query: 169 ARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
A+ F + ++ DEM L V+ +T ++ R A A +EAI F +++G D +A
Sbjct: 243 AKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTA 302
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
L+ L + VE A F K +++ + N++++G+C + EA + ++ K
Sbjct: 303 MNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEK 362
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
S EPD ++Y F+ A ++ ++ M KG KP+V+T I+ AL K+I E
Sbjct: 363 SGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINE 422
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
AL+V +MK GC+P+ + Y+SLI L K R+ V E +++ME++ + P+ +T+N L
Sbjct: 423 ALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVT--PDVLTYNTL 480
Query: 406 LK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ + + E +L +ME CK TY+ +LK++ ++ + M K +
Sbjct: 481 ISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDV 540
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +Y +++ GL + G+L A S+F EM K MVP+ T
Sbjct: 541 SIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDST 581
>gi|356560073|ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 206/403 (51%), Gaps = 16/403 (3%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+EKAL Q + L+ L+ V++R R+D + A FF W + DYS +N ++D+L
Sbjct: 10 MEKALGQLGIPLSTPLVTGVLHRLRYDEKIALRFFTWAGHQEDYSHEPCAYNDMMDILSS 69
Query: 169 ARRFVELIQVFDEMPDLV--NEKTYG------ILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
R V+ ++ ++ + + N KT ++L +Y ++ RR
Sbjct: 70 TRYKVKQFRIVCDVLEYMKRNNKTTVPVEVLLVILRKYTEKYLTHVQKFARKRRIRVKTQ 129
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
+++AF LL LC+ VE AET ++ + + +T NI + GWC + N +
Sbjct: 130 PEINAFNLLLDALCKCCLVEDAETLYKKMRKTVKPNAETYNIFVFGWCRVRNPTRGMKLL 189
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK---PDVVTCNCIIDAL 337
+++++ PD+ Y T ++ K G + A+ LF+ M KG P T II AL
Sbjct: 190 EEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVAL 249
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
R+ E +++ M + GCLP+VTTY +I+ +C +++ Y++L+EM N S P
Sbjct: 250 AQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEM--GNKSYRP 307
Query: 398 NEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+ +T+N LK L KK E+ + RM C S TYN+++ ++ D D TW
Sbjct: 308 DIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETW 367
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+EM+ +G PD +Y+VMI GL++ ++EDA E+ KG+
Sbjct: 368 QEMDNRGCRPDIDTYSVMIDGLFNCNKVEDACFLLEEVINKGI 410
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 128/295 (43%), Gaps = 13/295 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLV--NEKTYGILLNRYAAAHMVEEAIGVF 211
P N FN +LD L + + ++ +M V N +TY I + + + +
Sbjct: 130 PEINAFNLLLDALCKCCLVEDAETLYKKMRKTVKPNAETYNIFVFGWCRVRNPTRGMKLL 189
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDI-----KTMNIILNG 266
+ E G D A+ + C+ V A FE + + G I KT II+
Sbjct: 190 EEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTK-GSSISSPTAKTYAIIIVA 248
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ E + +I S C PD TY + + GK+ A + + M K +PD
Sbjct: 249 LAQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPD 308
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+VT NC + LC K+ +AL++ M C+P+V TYN LI +I + +E
Sbjct: 309 IVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQ 368
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
EM+ N C P+ T++ ++ L K E+ ++LE + G K+ ++ L
Sbjct: 369 EMD--NRGCRPDIDTYSVMIDGLFNCNKVEDACFLLEEVINKGIKLPYKKFDSFL 421
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 7/249 (2%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP------DLVNEKTYGILLNRYAAAH 202
E + P + +N +D +A E + +F+ M KTY I++ A
Sbjct: 194 ELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVALAQHD 253
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMN 261
+EE + G L D++ ++ ++ +C ++ A F E N+ + DI T N
Sbjct: 254 RMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDIVTYN 313
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
L C +A + + +I+ C P TY ++ + A +Q M +
Sbjct: 314 CFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQEMDNR 373
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G +PD+ T + +ID L ++ +A +L E+ N+G ++S + L I ++ +
Sbjct: 374 GCRPDIDTYSVMIDGLFNCNKVEDACFLLEEVINKGIKLPYKKFDSFLMQLSVIGDLQAI 433
Query: 382 YEYLDEMEQ 390
+ + M +
Sbjct: 434 HRVSEHMRK 442
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 9/183 (4%)
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+P++ N ++DALC K + E E L + + PN TYN + C+++ +
Sbjct: 129 QPEINAFNLLLDALC-KCCLVEDAETLYKKMRKTVKPNAETYNIFVFGWCRVRNPTRGMK 187
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT---YNVI 437
L+EM + P+ +N + + K E + E M G +S+ T Y +I
Sbjct: 188 LLEEMVELGHR--PDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAII 245
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ D ++ M G PD +Y +I G+ G++++A + EM K
Sbjct: 246 IVALAQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSY 305
Query: 498 VPE 500
P+
Sbjct: 306 RPD 308
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 215/419 (51%), Gaps = 9/419 (2%)
Query: 88 DEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVS 147
D+I + +NI + S + IEK L ++ L++ V+ R A +FFKW
Sbjct: 79 DKIIEDTRNICRLLSKNPNSSIEKLLLGASFKVSPALVLEVLKRLSNAGALALSFFKWAE 138
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMVE 205
++ + + +NA++D LG+ ++F + + ++M ++ ++T+ ++ RYA + V+
Sbjct: 139 KQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKRKGVLTKETFALISRRYARSGKVK 198
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIIL 264
EA+ F++ ++FG + + F LL L + + V A+ F+ K F DIK+ I+L
Sbjct: 199 EAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTILL 258
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
GW N+ + ++++ EPD VTY +NA K K A+ LF+ M K +
Sbjct: 259 EGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQ 318
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P +I+ L +R+ EALE R K G P TYN+++ C R++ Y
Sbjct: 319 PSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRM 378
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERME-RNGCKMSTDTYNVILKL 440
+DEM +K+G PN T++ +L L K E E V E+M C+ + TY++I+++
Sbjct: 379 VDEM-RKSGVG-PNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRM 436
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ N D + W+ M+ KG+ P ++++I+ L + +L+ A YF EM G+ P
Sbjct: 437 FCNMDKVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRP 495
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 46/273 (16%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P + +L+ G+ + ++L +V+ EM PD+V TYGIL+N Y +
Sbjct: 247 FVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVV---TYGILINAYCKVRKYD 303
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIIL 264
+AI +F + F L+ L + + A FF S+ + F + T N ++
Sbjct: 304 DAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVV 363
Query: 265 NGWCVLGNVYEAKRFWKDIIKS------------------------------------KC 288
+C + +A R ++ KS +C
Sbjct: 364 GAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEEC 423
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
EP TY V K+ +A++++ M KG P + + +I++LC + ++ A +
Sbjct: 424 EPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACK 483
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
+EM + G P ++ L + L + R +TV
Sbjct: 484 YFQEMLDVGIRPPAALFSHLKQALIEDGRKDTV 516
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 41/267 (15%)
Query: 241 VAETFFE-SEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDI--IKSKCEPDSVTYA 296
+A +FF+ +EK + F Y+ ++ N +++ LG + + W + +K K T+A
Sbjct: 129 LALSFFKWAEKQKGFMYNTESYNALIDS---LGKIKQFNMIWNLVNDMKRKGVLTKETFA 185
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+ GK+ A+ F+ M + G K + N ++D L +++ A V +MK R
Sbjct: 186 LISRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIR 245
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP 416
+P++ +Y L++ + K + LDE
Sbjct: 246 RFVPDIKSYTILLEGWGQEKNLLK----LDE----------------------------- 272
Query: 417 WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
V M+ G + TY +++ Y D + EME K P + +I+GL
Sbjct: 273 -VYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGL 331
Query: 477 YDKGRLEDALSYFHEMRLKGMVPEPRT 503
RL +AL +F + G PE T
Sbjct: 332 GSVRRLSEALEFFRRSKASGFAPETPT 358
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 220/455 (48%), Gaps = 21/455 (4%)
Query: 66 TAQLVHSLANSDEKSEFQRY-------PGDEIAINVQNILKTCSVSTKGEIEKALNQCEL 118
+ LV +L + + F+ + P ++ + +L + K ++E L
Sbjct: 6 VSSLVRALYQTPKSQSFRIFSTLLHDPPSPDLVNEISRVLSD-HRNPKDDLEHTLVAYSP 64
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
++ +L+ V+ R + A+ FF W R D++ ++ ++++LG +++F L
Sbjct: 65 RVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDF 124
Query: 179 FDEMPDL----VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
E + ++ K + I+ Y+ A++ EA F+R EFG + LL LC
Sbjct: 125 LIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLC 184
Query: 235 RYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
KHV A+ FF K FG KT +I++ GW + + A++ + ++++ C D
Sbjct: 185 DKKHVNHAQEFFGKAKG-FGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDL 243
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
+ Y ++AL K G + ++FQ M G KPD + I A C + A +VL
Sbjct: 244 LAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDR 303
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
MK +PNV T+N +IK LCK ++++ Y LDEM QK + P+ T+N ++
Sbjct: 304 MKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGAN--PDTWTYNSIMAYHCDH 361
Query: 413 EEV---PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
EV +L RM+R C TYN++LKL + D+ WE M ++ P +Y
Sbjct: 362 CEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATY 421
Query: 470 TVMIHGLY-DKGRLEDALSYFHEMRLKGMVPEPRT 503
TVMIHGL KG+LE+A YF M +G+ P T
Sbjct: 422 TVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTT 456
>gi|115460906|ref|NP_001054053.1| Os04g0643700 [Oryza sativa Japonica Group]
gi|38344884|emb|CAD41907.2| OSJNBa0033G05.8 [Oryza sativa Japonica Group]
gi|113565624|dbj|BAF15967.1| Os04g0643700 [Oryza sativa Japonica Group]
gi|125591829|gb|EAZ32179.1| hypothetical protein OsJ_16385 [Oryza sativa Japonica Group]
gi|215701473|dbj|BAG92897.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704877|dbj|BAG94905.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 442
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 192/387 (49%), Gaps = 11/387 (2%)
Query: 125 IVNVINRYRFDWEAAYTFFKW-VSREG-DYSPGSNVFNAILDVLGRARRFVELIQVFDEM 182
++ ++ Y DW A FF W S +G + P +DVLG+ F +
Sbjct: 36 VLETLSLYANDWRRALEFFHWSASPDGANVPPTPATVARAVDVLGKHFEFPLATSLLVSH 95
Query: 183 PDLVNEKTYGI------LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
D + LLNR AAA+++++AI FD L D ++F L+ LC +
Sbjct: 96 HDPGRADPSFLRPALRSLLNRLAAANLIDDAIRAFDSTAGSIGLRDEASFHALVDALCDH 155
Query: 237 KHVEVAETF-FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
+ V+ A F + F KT N++L GW ++ W D+ D +Y
Sbjct: 156 RRVDEAHHLCFGKDPPPFPPVTKTYNLLLRGWAKTRAWARLRQLWFDMDSRGVAKDLHSY 215
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+ +++AL K GK A ++F+ M +KG DVV N I ++ + + A+ + R+M +
Sbjct: 216 SIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQGVDFAIRLYRQMVD 275
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
GC PN +T+N+++K LCK R + Y ++ +M + PN +T++ + L +P+EV
Sbjct: 276 AGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFG--IEPNVLTYHCFFQYLSRPQEV 333
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
+ E+M GC+ DTY +++K + W V W+ MEK+G+ PD +Y +I
Sbjct: 334 LGLFEKMLERGCRPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEKQGLSPDAFAYNSLIDA 393
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPR 502
L KG ++ A Y EM KG+ P+PR
Sbjct: 394 LLQKGMVDLARKYDEEMLSKGLSPKPR 420
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 109/280 (38%), Gaps = 42/280 (15%)
Query: 159 FNAILDVLGRARRFVELIQVF---DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
F+A++D L RR E + D P KTY +LL +A ++
Sbjct: 145 FHALVDALCDHRRVDEAHHLCFGKDPPPFPPVTKTYNLLLRGWAKTRAWARLRQLWFDMD 204
Query: 216 EFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVY 274
G DL ++ + L + K + + F E ++ D+ N ++ + V
Sbjct: 205 SRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQGVD 264
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
A R ++ ++ + C+P++ T+ T V L K+G+ Q M + G +P+V+T +C
Sbjct: 265 FAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHCFF 324
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTY----------------------------- 365
L R E L + +M RGC P + TY
Sbjct: 325 QYLS---RPQEVLGLFEKMLERGCRPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEKQGLS 381
Query: 366 ------NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
NSLI L + ++ +Y +EM K S P +
Sbjct: 382 PDAFAYNSLIDALLQKGMVDLARKYDEEMLSKGLSPKPRK 421
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 225/464 (48%), Gaps = 18/464 (3%)
Query: 74 ANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYR 133
A S E++EF+ DE IL +C S + I A++ C + ++D ++ ++ R+
Sbjct: 84 AASHEEAEFE-ADFDE----ASRILTSCFASPEA-IVIAMDCCPVRVSDRMVDKILRRFG 137
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV---ELIQVFDEMPDLVNEKT 190
DW AA+ FF W + Y ++ +N+++D+LG+ ++F LI DE+ LV+ T
Sbjct: 138 SDWVAAFGFFMWAGAQEGYRHSADSYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLAT 197
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
++ R A A +AI F++ +FG + D +A LL LC+ + V+ A F+ +
Sbjct: 198 MTKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELR 257
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
D + N +++GWC + EA+ K++ + +P +TY + + A + T
Sbjct: 258 GSVPPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQT 317
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
+ M KG P+V+T ++ AL R EAL++ +++ GC P+ + YNSLI
Sbjct: 318 VYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIY 377
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGC 427
L + R+E +D+M P TFN L+ + + E +L +ME C
Sbjct: 378 ILGRAGRLEDANSVVDKMRMTG--VRPTVATFNTLISAACDHSQAENALKMLVKMEEQSC 435
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
K TY +LKL +R M +K + PD +YT+++ L G+ +
Sbjct: 436 KPDIKTYTPLLKLCCKRQWIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCL 495
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKL-KERGEQGKKVIKLTSL 530
+ EM LKG P+ T LV + KL K KK I+L +L
Sbjct: 496 FLEEMVLKGFAPKKETFDLVAE---KLDKANLHSAKKKIQLLTL 536
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 192/368 (52%), Gaps = 8/368 (2%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VN 187
R+ + A +FF W + ++ +N ++D+ G+ R F QV D M ++
Sbjct: 117 RHGIPFFQALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEIS 176
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
+T+ IL+ RY A + EA+ F+R +++ D AF L+ LCR + A++FF+
Sbjct: 177 IETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFD 236
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
S K++F D+ ++ GWC GN+ EA+R + ++ + C P+ TY ++AL + G+
Sbjct: 237 SLKDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQ 296
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A +F M + G +P+ +T N ++ R + L+V +MK GC P+ TYN
Sbjct: 297 ITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNF 356
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMER 424
LI+ CK ++ + L+ M +K C PN TFN L S+ K +V + +M+
Sbjct: 357 LIESHCKDGNLDEALKVLNSMVKK--GCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKE 414
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
CK +T TYN++++++V+ D V +EM++ + P+ +Y V+I G +
Sbjct: 415 LKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNN 474
Query: 485 ALSYFHEM 492
A +F EM
Sbjct: 475 AYKFFREM 482
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 7/258 (2%)
Query: 282 DIIKSKCEPDSV-TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
D++K++ S+ T++ + + G A+ F M + KPD + + +I LC K
Sbjct: 166 DLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRK 225
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
+R EA +K++ P+V Y +L++ C+ + EM K C+PN
Sbjct: 226 RRATEAQSFFDSLKDKF-EPDVIVYTNLVRGWCRAGNIPEAERVFTEM--KVAGCMPNVY 282
Query: 401 TFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T+ ++ +L + ++ V M GC+ ++ T+N +L+++V +KV + +M
Sbjct: 283 TYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQM 342
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517
++ G PD +Y +I G L++AL + M KG P T + KL++
Sbjct: 343 KRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDV 402
Query: 518 GEQGKKVIKLTSLGLKGN 535
+ K+ L K N
Sbjct: 403 NGAHRLYAKMKELKCKAN 420
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 10/293 (3%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP 183
++++++ R R EA +FF S + + P V+ ++ RA E +VF EM
Sbjct: 217 ILISILCRKRRATEAQ-SFFD--SLKDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMK 273
Query: 184 D---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
+ N TY I+++ + A VF + G + F NLL + E
Sbjct: 274 VAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTE 333
Query: 241 -VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
V + + + ++ D T N ++ C GN+ EA + ++K C P++ T+
Sbjct: 334 KVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLF 393
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
++ K + A RL+ M E K + VT N ++ K L++ +EM
Sbjct: 394 GSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVE 453
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL-PNEITFNYLLKSLKK 411
PNV TY LI C + Y++ EM ++ CL P+ + +L+ L+K
Sbjct: 454 PNVNTYCVLIAMYCGMGHWNNAYKFFREMVEE--KCLKPSLPVYEKVLQQLRK 504
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 43/78 (55%)
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
V++ M+ ++S +T++++++ YV + H + ME PD+ +++++I L
Sbjct: 164 VIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILC 223
Query: 478 DKGRLEDALSYFHEMRLK 495
K R +A S+F ++ K
Sbjct: 224 RKRRATEAQSFFDSLKDK 241
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 210/400 (52%), Gaps = 8/400 (2%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+ AL+Q + ++ +++ +V+ R+ AY FF+W ++ Y+ ++ +++ L +
Sbjct: 9 LHTALDQNGIRVSPEIVEDVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYHTMIESLAK 68
Query: 169 ARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
R++ + + + M ++N +T+ I++ +YA A +EEA+ F+ +++ +L+AF
Sbjct: 69 IRQYQIMWDLINAMKRKRMLNVETFCIIMRKYARAQKLEEAVYTFNVMEKYDVPPNLAAF 128
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
L LC+ K+V A+ F+S K+ F D KT I+L GW N+ +A+ +++++
Sbjct: 129 NGLFSALCKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPNLPKAREIFREMVDV 188
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
C PD VTY V+ L K G++ AL + + M KP + +I + RI +A
Sbjct: 189 GCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDA 248
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
++ M+ G +V YN+LI CK+ + + VY L+EM+ K PN T N +L
Sbjct: 249 VDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQ--PNSRTLNIIL 306
Query: 407 KSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
+L + +E V RM + C+ DTY +++K++ + + W+ M+KK
Sbjct: 307 NNLIARGETDEAFRVFRRMIK-VCEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFV 365
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
P +++V+I+GL ++G + A +M KG+ P T
Sbjct: 366 PSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVT 405
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 120/239 (50%), Gaps = 6/239 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIG 209
SP + ++D+L +A R E + + EM + + T Y +L++ Y + +E+A+
Sbjct: 191 SPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVD 250
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
F ++ G D++A+ L+ C+ K V E + + +T+NIILN
Sbjct: 251 TFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLI 310
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G EA R ++ +IK CEPD+ TY + ++ +L AL++++ M +K P +
Sbjct: 311 ARGETDEAFRVFRRMIKV-CEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMH 369
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T + +I+ LC + + A +L +M +G P+ T+ L +HL + E V E+L +
Sbjct: 370 TFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRL-RHLLIKEGREDVLEFLQQ 427
>gi|413939122|gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
Length = 526
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 207/420 (49%), Gaps = 29/420 (6%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDY---SPGSNVFNAILDVLGRARRFVE 174
++L+ DL+V ++ R R + A + + P S+ ++A++D LGRAR+F
Sbjct: 77 VSLSGDLLVQILLRLRGASKLALSLLHAARLHPSFVNTQPRSDAYDAVVDALGRARQFDA 136
Query: 175 LIQVF-DEMPD-LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD-DLSAFQNLLL 231
+V D D + +T+ +L RY AA M +AI FD + F + D + F LL
Sbjct: 137 AWRVVVDASADGAASPRTFAVLARRYVAAGMTRQAIRAFDDMEAFVSREPDAAEFATLLD 196
Query: 232 WLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LC+YK+ +VA F K ++G + K +I++ GWC + AK+F KD++ EP+
Sbjct: 197 TLCKYKYPKVATEVFNKRKYKYGPNEKMYSILIYGWCKVNRSDMAKKFLKDMLVHGIEPN 256
Query: 292 SVTYATFVNALTKKGKLGTALR----------LFQAMWEKGRKPDVVTCNCIIDALCFKK 341
VTY +N + + L R L + M +G +PDV + + I+
Sbjct: 257 IVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIEPDVTSYSIILHVYSRAH 316
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ L + R MK RG P V TY S+IK L R+E LDEM + G C P+ T
Sbjct: 317 KPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGEILLDEMVAE-GVC-PSPAT 374
Query: 402 FNYLLKSLKKPEEVPWVLE---RMERNGCKMSTD--TYNVILKLYVNWDCEDKVRHTWEE 456
+N LK + ++V LE +M+ G + D TYN++L ++ + V W +
Sbjct: 375 YNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNRHGTVMDIWSD 434
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT------GILVNDM 510
M + +GPD SYT++IH D + +A +F EM KG +P+ T G++ DM
Sbjct: 435 MCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKITFETLYRGLIQADM 494
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 6/201 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+ +Y I+L+ Y+ AH E + +F KE G ++ + +++ L +E
Sbjct: 300 PDVT---SYSIILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDG 356
Query: 243 ETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDI--IKSKCEPDSVTYATFV 299
E + E T N L + +V A + + S PD TY +
Sbjct: 357 EILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILL 416
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+K + GT + ++ M E PD+ + +I C ++ EA + EM +G L
Sbjct: 417 GMFSKLNRHGTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFL 476
Query: 360 PNVTTYNSLIKHLCKIKRMET 380
P T+ +L + L + + T
Sbjct: 477 PQKITFETLYRGLIQADMLRT 497
>gi|255579214|ref|XP_002530453.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529998|gb|EEF31923.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 391
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 193/384 (50%), Gaps = 59/384 (15%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD 184
I ++ Y DW++A FF WV +E +++ ++ FN ++D+L
Sbjct: 52 IFETLSCYSNDWKSALDFFNWVEKECNFNHTTDTFNRMIDIL------------------ 93
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAE 243
E L D ++F NL+ LC +KHV E E
Sbjct: 94 -------------------------------EKFNLKDETSFCNLIDALCEHKHVIESQE 122
Query: 244 TFFESEKNEFGYDI----KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
F N G DI K N+IL GW +G + + FW+++ + D +Y+ ++
Sbjct: 123 LCF---GNNNGIDIVNKTKIYNMILRGWFKMGWWSKCREFWEEMDQKGVHKDLHSYSIYM 179
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ + K GK A++L++ M KG K DVV+ N ++ A+ + + A+ V REMK GC+
Sbjct: 180 DIVCKGGKPWKAVKLYKEMKRKGMKLDVVSYNIVVRAVGLSEGVDFAMRVYREMKELGCM 239
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
PNV TYN++IK LC+ R++ Y+ LD+M +K + + IT++ + L+KP+E+ W+
Sbjct: 240 PNVVTYNTIIKLLCETGRVKEAYKMLDDMRKK--GIVADVITYHCFFRCLEKPKEILWLF 297
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+RM +G + DTY ++++ + W V W++ME++G PD+ +Y +I L K
Sbjct: 298 DRMIESGVQPRMDTYVMLMRKFGRWGFLRPVLLVWKKMEEQGCSPDEFAYNALIDALVQK 357
Query: 480 GRLEDALSYFHEMRLKGMVPEPRT 503
G L A Y EM KG+ +PR
Sbjct: 358 GMLHMARRYEEEMLAKGLSAKPRA 381
>gi|296081511|emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 221/431 (51%), Gaps = 29/431 (6%)
Query: 60 FLGRIET--AQLVHSLANSDEKSEFQRYPGDEIAINV------QNILKTCSV-----STK 106
FLG A+ + +SD + + GD +NV + + + C V +
Sbjct: 115 FLGSFSRGFARALGGDQHSDPEPDGDNVGGDFDEVNVNSGADPEEVSRVCRVIDELFALD 174
Query: 107 GEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVL 166
+E L++C + L+ L+V V+ R++ + A+ FF W ++ ++ S +NA++ VL
Sbjct: 175 RNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVL 234
Query: 167 GRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
GR R+F ++ + EM + L+ +T+ I + +AAA ++A+GVF+ K + +
Sbjct: 235 GRTRQFESMMGMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVD 294
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
LL L R K + A+ FE ++ F +++T ++LNGWC + N+ EA R W ++I
Sbjct: 295 TINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMI 354
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+PD + + T + L K K A++LF+ M KG P+V T +I LC + ++
Sbjct: 355 DKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQ 414
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA+E EM + GC P+ Y LI K+M+ VY L EM++K C + T+N
Sbjct: 415 EAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEK--GCPADGRTYNA 472
Query: 405 LLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYV---NWDCEDKVRHTWEEME 458
L+K + + P++ + ++M +NG + + TYN+++K Y N++ EM
Sbjct: 473 LIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEM------GCAEMI 526
Query: 459 KKGMGPDQRSY 469
+KGM Q Y
Sbjct: 527 EKGMKAPQLDY 537
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 18/279 (6%)
Query: 235 RYKHV-EVAETFF--ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
R+KH + A FF +K F ++ +T N +++ VLG + + ++ E
Sbjct: 199 RFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMS---VLGRTRQFESMM-GMLGEMGEKG 254
Query: 292 SVTYATFVNALTKKGKLG---TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
+T TF A+ A+ +F+ M V T NC++D L K EA
Sbjct: 255 LLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQA 314
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ ++++R PN+ TY L+ C+IK + +EM K P+ I + +L+
Sbjct: 315 LFEKLEDR-FTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFK--PDIIAHHTMLEG 371
Query: 409 L---KKPEEVPWVLERMERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGP 464
L KK + + E M+ G + TY ++++ L ++ V + ++EM G P
Sbjct: 372 LLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEY-FDEMVDSGCQP 430
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D YT +I G ++ +++ + EM+ KG + RT
Sbjct: 431 DAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRT 469
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 401 TFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T N LL +L + + E + E++E + + TY V+L + + TW EM
Sbjct: 295 TINCLLDNLGRAKLGKEAQALFEKLE-DRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEM 353
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLK 515
KG PD ++ M+ GL + DA+ F M+ KG P RT IL+ D+ ++K
Sbjct: 354 IDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMK 412
>gi|90399282|emb|CAH68243.1| H0306F03.10 [Oryza sativa Indica Group]
gi|125549952|gb|EAY95774.1| hypothetical protein OsI_17648 [Oryza sativa Indica Group]
Length = 442
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 191/387 (49%), Gaps = 11/387 (2%)
Query: 125 IVNVINRYRFDWEAAYTFFKW-VSREG-DYSPGSNVFNAILDVLGRARRFVELIQVFDEM 182
++ ++ Y DW A FF W S +G + P +DVLG+ F +
Sbjct: 36 VLETLSLYANDWRRALEFFHWSASPDGANVPPTPATVARAVDVLGKHFEFPLATSLLVSH 95
Query: 183 PDLVNEKTYGI------LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
D + LLNR AAA+++++AI FD L D ++F L+ LC +
Sbjct: 96 HDPGRADPSFLRPALRSLLNRLAAANLIDDAIRAFDSTAGSIGLRDEASFHALVDALCDH 155
Query: 237 KHVEVAETF-FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
+ V+ A F + F KT N++L GW ++ W D+ D +Y
Sbjct: 156 RRVDEAHHLCFGKDPPPFPPVTKTYNLLLRGWAKTRAWARLRQLWFDMDSRGVAKDLHSY 215
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+ +++AL K GK A ++F+ M +KG DVV N I ++ + + A+ + R+M +
Sbjct: 216 SIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQGVDFAIRLYRQMVD 275
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
GC PN +T+N+++K LCK R + Y ++ +M + PN +T++ + L +P+EV
Sbjct: 276 AGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFG--IEPNVLTYHCFFQYLSRPQEV 333
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
+ E+M GC DTY +++K + W V W+ ME++G+ PD +Y +I
Sbjct: 334 LGLFEKMLERGCWPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNSLIDA 393
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPR 502
L KG ++ A Y EM KG+ P+PR
Sbjct: 394 LLQKGMVDLARKYDEEMLSKGLSPKPR 420
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 109/280 (38%), Gaps = 42/280 (15%)
Query: 159 FNAILDVLGRARRFVELIQVF---DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
F+A++D L RR E + D P KTY +LL +A ++
Sbjct: 145 FHALVDALCDHRRVDEAHHLCFGKDPPPFPPVTKTYNLLLRGWAKTRAWARLRQLWFDMD 204
Query: 216 EFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVY 274
G DL ++ + L + K + + F E ++ D+ N ++ + V
Sbjct: 205 SRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQGVD 264
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
A R ++ ++ + C+P++ T+ T V L K+G+ Q M + G +P+V+T +C
Sbjct: 265 FAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHCFF 324
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTY----------------------------- 365
L R E L + +M RGC P + TY
Sbjct: 325 QYLS---RPQEVLGLFEKMLERGCWPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLS 381
Query: 366 ------NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
NSLI L + ++ +Y +EM K S P +
Sbjct: 382 PDAFAYNSLIDALLQKGMVDLARKYDEEMLSKGLSPKPRK 421
>gi|240256396|ref|NP_199195.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635652|sp|P0C8R0.1|PP416_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g43820
gi|332007631|gb|AED95014.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 546
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 191/403 (47%), Gaps = 14/403 (3%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
K I+K+L+ + L+ D++ +V+NR EA TFF W RE + ++ IL
Sbjct: 101 KSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRA 160
Query: 166 LGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGE 219
LGR + F ++ V M PDL + I ++ + H V AI +F+ + FG
Sbjct: 161 LGRRKLFSFMMDVLKGMVCEGVNPDL---ECLTIAMDSFVRVHYVRRAIELFEESESFGV 217
Query: 220 LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
+F LL LC HV A++ F ++K +D + NI+++GW LG V E ++
Sbjct: 218 KCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKV 277
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K++++S PD ++Y+ + L + G++ ++ +F + KG PD N +I
Sbjct: 278 LKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFIS 337
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ E++ R M + C PN+ TY+ L+ L K +++ E +EM + LP
Sbjct: 338 ARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRG--VLPTT 395
Query: 400 ITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
LK L P + ++ + GC++S Y ++LK + + + W+E
Sbjct: 396 GLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDE 455
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
M++ G D Y ++ GL G LE+A+ E KG P
Sbjct: 456 MQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCP 498
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 8/241 (3%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGILLNRYAAAHMVE 205
E + P ++ +++ LGR R + +++FD + ++ + Y ++ + +A +
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNII-- 263
E++ + R + +L + L+ L + + V A FE E G + T ++
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFE-EMLSRGV-LPTTGLVTS 400
Query: 264 -LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
L C G + A ++ K+ C Y + L++ GK G L ++ M E G
Sbjct: 401 FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESG 460
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
DV I+D LC + A+ V+ E +G PN Y+ L L + E Y
Sbjct: 461 YPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAY 520
Query: 383 E 383
+
Sbjct: 521 K 521
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
A+ E G DV + + I+ AL +K ++VL+ M G P++ + ++
Sbjct: 141 AVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVH 200
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV--LERMERNGCKMSTDTY 434
+ E +E E C +FN LL+ L + V + ++ + +Y
Sbjct: 201 YVRRAIELFEESESFGVKCSTE--SFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSY 258
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N+++ + +++ +EM + G GPD SY+ +I GL GR+ D++ F ++
Sbjct: 259 NIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKH 318
Query: 495 KGMVPE 500
KG VP+
Sbjct: 319 KGNVPD 324
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 99/222 (44%), Gaps = 15/222 (6%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNA 161
SV I+ N + + + +I N I+ FD E+ + + + E + P ++
Sbjct: 309 SVEIFDNIKHKGNVPDANVYNAMICNFISARDFD-ESMRYYRRMLDEECE--PNLETYSK 365
Query: 162 ILDVLGRARRFVELIQVFDEMPDLVNEKTYGIL------LNRYAAAHMVEEAIGVFDRRK 215
++ L + R+ + +++F+EM T G++ L Y H A+ ++ + +
Sbjct: 366 LVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPH---AAMVIYQKSR 422
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G SA++ LL L R+ + ++ E E GY D++ I++G C++G++
Sbjct: 423 KAGCRISESAYKLLLKRLSRFGKCGMLLNVWD-EMQESGYPSDVEVYEYIVDGLCIIGHL 481
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
A ++ ++ P+ Y+ + L K A +LF
Sbjct: 482 ENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
>gi|10177952|dbj|BAB11311.1| unnamed protein product [Arabidopsis thaliana]
Length = 680
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 191/403 (47%), Gaps = 14/403 (3%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
K I+K+L+ + L+ D++ +V+NR EA TFF W RE + ++ IL
Sbjct: 101 KSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRA 160
Query: 166 LGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGE 219
LGR + F ++ V M PDL + I ++ + H V AI +F+ + FG
Sbjct: 161 LGRRKLFSFMMDVLKGMVCEGVNPDL---ECLTIAMDSFVRVHYVRRAIELFEESESFGV 217
Query: 220 LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
+F LL LC HV A++ F ++K +D + NI+++GW LG V E ++
Sbjct: 218 KCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKV 277
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K++++S PD ++Y+ + L + G++ ++ +F + KG PD N +I
Sbjct: 278 LKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFIS 337
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ E++ R M + C PN+ TY+ L+ L K +++ E +EM + LP
Sbjct: 338 ARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRG--VLPTT 395
Query: 400 ITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
LK L P + ++ + GC++S Y ++LK + + + W+E
Sbjct: 396 GLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDE 455
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
M++ G D Y ++ GL G LE+A+ E KG P
Sbjct: 456 MQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCP 498
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 97/226 (42%), Gaps = 8/226 (3%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGILLNRYAAAHMVE 205
E + P ++ +++ LGR R + +++FD + ++ + Y ++ + +A +
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNII-- 263
E++ + R + +L + L+ L + + V A FE E G + T ++
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFE-EMLSRGV-LPTTGLVTS 400
Query: 264 -LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
L C G + A ++ K+ C Y + L++ GK G L ++ M E G
Sbjct: 401 FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESG 460
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
DV I+D LC + A+ V+ E +G PN Y+ L
Sbjct: 461 YPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRL 506
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 7/208 (3%)
Query: 298 FVNALTKKGKL-GTALRLF--QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
V + +G L G A+ F A+ E G DV + + I+ AL +K ++VL+ M
Sbjct: 119 IVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMV 178
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
G P++ + ++ + E +E E C +FN LL+ L +
Sbjct: 179 CEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTE--SFNALLRCLCERSH 236
Query: 415 VPWV--LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
V + ++ + +YN+++ + +++ +EM + G GPD SY+ +
Sbjct: 237 VSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHL 296
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPE 500
I GL GR+ D++ F ++ KG VP+
Sbjct: 297 IEGLGRTGRINDSVEIFDNIKHKGNVPD 324
>gi|125561327|gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
Length = 511
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 191/382 (50%), Gaps = 26/382 (6%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGV 210
S ++ ++A++D LGRAR+F ++ E +T+ +L RY AA M +A+
Sbjct: 100 SRAADAYDAVVDALGRARQFDAAWRLVVEAAADGAATPRTFAVLARRYVAAGMTRQAVRA 159
Query: 211 FDRRKEF-GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCV 269
FD + F G D + F LL LC+YK+ +VA F K ++ + K +++ GWC
Sbjct: 160 FDDMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWCK 219
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR----------LFQAMW 319
+ A++F KD+I EP+ VTY +N + + L R L + M
Sbjct: 220 VNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMH 279
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
++G +PDV + + I+ + L + R MK RG P V TY S+IK L R++
Sbjct: 280 QRGIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLD 339
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTD--TY 434
LDEM + G C P+ T+N K + ++V L+ +M+ G + D TY
Sbjct: 340 DAESLLDEMASE-GVC-PSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTY 397
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N++L +++ + D V W +M + +GPD SYT+++HGL D + +A +F EM
Sbjct: 398 NILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIE 457
Query: 495 KGMVPEPRT------GILVNDM 510
+G +P+ T G++ DM
Sbjct: 458 RGFLPQKITFETLYRGLIQADM 479
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 6/201 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+ +Y ++L+ Y+ AH E + +F KE G ++ + +++ L ++ A
Sbjct: 285 PDVT---SYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDA 341
Query: 243 ETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDI--IKSKCEPDSVTYATFV 299
E+ + +E T N + +V A + + + S PD TY +
Sbjct: 342 ESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILL 401
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
K + T ++++ M E PD+ + ++ LC K+ EA + EM RG L
Sbjct: 402 GMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFL 461
Query: 360 PNVTTYNSLIKHLCKIKRMET 380
P T+ +L + L + + T
Sbjct: 462 PQKITFETLYRGLIQADMLRT 482
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 6/183 (3%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
+E P + +++ L R + + DEM + TY Y V
Sbjct: 314 KERGICPTVATYTSVIKCLASCGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDV 373
Query: 205 EEAIGVFDRRKEFGE--LDDLSAFQNLL-LWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
A+ ++++ K G D+ + LL +++ +H V + + + ++ G D+ +
Sbjct: 374 NGALQLYNKMKAPGSPATPDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYT 433
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++++G C EA +F+ ++I+ P +T+ T L + L T RL + + E+
Sbjct: 434 LLVHGLCDNKKWREACQFFMEMIERGFLPQKITFETLYRGLIQADMLRTWRRLKKRVDEE 493
Query: 322 GRK 324
K
Sbjct: 494 AAK 496
>gi|326504802|dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 204/419 (48%), Gaps = 28/419 (6%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS--PGSNVFNAILDVLGRARRFVEL 175
++L+ L+V ++ R R + A + V S P ++ ++A++D LGRA +F
Sbjct: 74 VSLSQGLLVQILLRLRGASKLALSLLNAVRLHPSVSSPPNADAYDAVVDALGRAHQFDAA 133
Query: 176 IQVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF-GELDDLSAFQNLLLW 232
++ E +T+ +L RY AA + +A+ FD + F G D F LL
Sbjct: 134 WRLVVEAAADGAATPRTFAVLARRYVAAGLTRQAVRAFDDMEAFLGREPDAQEFTTLLDT 193
Query: 233 LCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
LC+YK+ +VA F K ++ + K I++ GWC + A++F KD+I EP+
Sbjct: 194 LCKYKYPKVAVEVFNKRKYKYEPNEKMYTILIYGWCKVNRSDMAQKFLKDMIDHGIEPNI 253
Query: 293 VTYATFVNALTKKGKL----------GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
VTY +N + + L A L + M ++G +PDV + + I+ +
Sbjct: 254 VTYNILLNGICRHASLHPDNRFDRTVNAAENLLKEMNDRGIEPDVTSYSIILHVYSRAHK 313
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
L + R MK+RG P V TY S+IK L R+E L EM + G C P+ T+
Sbjct: 314 AELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAESLLGEMVSE-GVC-PSPATY 371
Query: 403 NYLLKSLKKPEEVPWVLE---RMERNGCKMSTD--TYNVILKLYVNWDCEDKVRHTWEEM 457
N K + ++V LE +M+ + D +YN++L +++ D + V W +M
Sbjct: 372 NCFFKEYRGRKDVSGALELYNKMKAPCSPTAPDIHSYNILLGMFIKLDRHETVMELWNDM 431
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE------PRTGILVNDM 510
++ +GPD SYT+++HG K + +A +F EM KG +P+ P G++ DM
Sbjct: 432 CERAVGPDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGFLPQKITFETPYRGLIQADM 490
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+ +Y I+L+ Y+ AH E + +F K+ G ++ + +++ L +E A
Sbjct: 296 PDVT---SYSIILHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDA 352
Query: 243 ETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP---DSVTYATF 298
E+ +E T N + +V A + + K+ C P D +Y
Sbjct: 353 ESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNKM-KAPCSPTAPDIHSYNIL 411
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
+ K + T + L+ M E+ PD+ + ++ C K++ EA + EM +G
Sbjct: 412 LGMFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGF 471
Query: 359 LPNVTTYNSLIKHLCKIKRMET 380
LP T+ + + L + + T
Sbjct: 472 LPQKITFETPYRGLIQADMLRT 493
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 217/416 (52%), Gaps = 11/416 (2%)
Query: 89 EIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR 148
E + V ++ TC T G ++ ALNQ + ++ DL+ NV+ R+ A+ FF+W +
Sbjct: 14 EASERVCKVMMTCP--TLG-LDTALNQTGVRVSPDLVENVLKRFENAGMPAFRFFEWAEK 70
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEE 206
+ YS ++ +++ L + R++ + + M ++N +T+ I++ +YA A+ V+E
Sbjct: 71 QRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKGMLNVETFCIMMRKYARANKVDE 130
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNG 266
A+ F+ ++ + +L+AF LL LC+ +V A+ F++ K +F D K+ +I+L G
Sbjct: 131 AVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQFVPDEKSYSILLEG 190
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
W N+ A+ +++++++ C+PD VTY V+ L K G++ A+ + + M +P
Sbjct: 191 WGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPT 250
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+ ++ + RI +A++ EM +G +V YN+LI CK+ + + V+ L
Sbjct: 251 SFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLK 310
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EME NG PN T N ++ S+ + + V RM + C+ DTY +++K++
Sbjct: 311 EMES-NGVA-PNSRTCNVIISSMIGQGQTDRAFRVFCRMIKL-CEPDADTYTMMIKMFCE 367
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + W+ M+ K P +++ +I GL +K A EM KG+ P
Sbjct: 368 KNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRP 423
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 116/244 (47%), Gaps = 8/244 (3%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK----TYGILLNRYAAAHMV 204
E P + ++DVL +A R E ++V EM D+ N + Y +L++ Y H +
Sbjct: 209 EAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEM-DVGNCRPTSFIYSVLVHTYGVEHRI 267
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNII 263
E+AI F + G D+ A+ L+ C+ K V E E N + +T N+I
Sbjct: 268 EDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVI 327
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ G A R + +IK CEPD+ TY + +K +L AL++++ M K
Sbjct: 328 ISSMIGQGQTDRAFRVFCRMIKL-CEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQF 386
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P + T + +I LC K +A V+ EM +G P+ T+ L + L K R E V +
Sbjct: 387 VPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGR-EDVLK 445
Query: 384 YLDE 387
+L E
Sbjct: 446 FLHE 449
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LK 410
K RG ++ Y+ +I+ L KI++ + V++ + M +K + N TF +++
Sbjct: 70 KQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKG---MLNVETFCIMMRKYARAN 126
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
K +E + M++ + +N +L + K + ++ M K PD++SY+
Sbjct: 127 KVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAM-KGQFVPDEKSYS 185
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
+++ G L A F EM G P+ T GI+V+
Sbjct: 186 ILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVD 224
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 228/460 (49%), Gaps = 21/460 (4%)
Query: 74 ANSDEKSEFQRYPGDE-------IAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIV 126
+ SD + F PG ++ + + + S + I L+ +T++ L+
Sbjct: 65 SESDVEPRFTVVPGAAQEGLAPGVSEAAERVCRVVSAQPEHRIAPVLDALGVTVSPQLVA 124
Query: 127 NVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--D 184
V+ A FF+W R+ + + F+ +++ LG+ ++F + + + M
Sbjct: 125 EVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRS 184
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
+++ T+ I++ RYA A V+EA+ F++ FG DLS + L+ L + K V+ A
Sbjct: 185 CLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHA 244
Query: 245 FFES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
F+ K F D+KT +++ GW ++ K +++++ + +PD V Y ++A
Sbjct: 245 IFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAF 304
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K GK A+++F M E G P +I+ L +R+ EAL+ + K G V
Sbjct: 305 CKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEV 364
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN----EITFNYLLKSLKKPEEVPWV 418
T N++I C+ ++ +DEM + PN +I N+L+KS +K EE +
Sbjct: 365 PTCNAVIGAYCRALEFHHAFKMVDEMRKSGIG--PNTRTYDIILNHLIKS-EKIEEAYNL 421
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+RMER+GC+ +TY +++ ++ + + D W++M++KG+ P ++ +I+GL
Sbjct: 422 FQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCF 481
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG 518
+ RLE+A YF EM KG+ P G L +++ L E G
Sbjct: 482 ENRLEEACVYFQEMLDKGIRP---PGQLFSNLKEALVEGG 518
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 130/293 (44%), Gaps = 45/293 (15%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+ FK + R+G + P + +++ G + + L V+ EM PD+V YG
Sbjct: 242 AHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVV---AYG 298
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKN 251
+L++ + + +EAI VF +E G + + L+ L + ++ A +F+ S+++
Sbjct: 299 MLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKES 358
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
F ++ T N ++ +C + A + ++ KS P++ TY +N L K K+ A
Sbjct: 359 GFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEA 418
Query: 312 LRLFQAM-------------------------------WEKGRKPDVVTC----NCIIDA 336
LFQ M W++ ++ V+ C + +I+
Sbjct: 419 YNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALING 478
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
LCF+ R+ EA +EM ++G P +++L + L + R+ E +E
Sbjct: 479 LCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQRLE 531
>gi|18491213|gb|AAL69509.1| unknown protein [Arabidopsis thaliana]
Length = 320
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 170/316 (53%), Gaps = 7/316 (2%)
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDI- 257
AH+V+EAI +D+ +F L D ++F NL+ LC +KHV E E F G+ +
Sbjct: 1 TAHLVQEAIDAYDKLDDFN-LRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVS 59
Query: 258 --KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
K N+IL GW LG + K +WK + D +Y+ +++ + K GK A++L+
Sbjct: 60 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 119
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ M + K DVV N +I A+ + + + V REM+ RGC PNV T+N++IK LC+
Sbjct: 120 KEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 179
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYN 435
RM Y LDEM ++ C P+ IT+ L L+KP E+ + RM R+G + DTY
Sbjct: 180 GRMRDAYRMLDEMPKRG--CQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYV 237
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++++ + W V + W+ M++ G PD +Y +I L KG L+ A Y EM +
Sbjct: 238 MLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIER 297
Query: 496 GMVPEPRTGILVNDMN 511
G+ P R ++ ++
Sbjct: 298 GLSPRRRPELVEKSLD 313
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 211/416 (50%), Gaps = 5/416 (1%)
Query: 87 GDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWV 146
++ + + + I K + T ++E LN+ + L+ LI V+ + A + FKW
Sbjct: 59 ANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWA 118
Query: 147 SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMV 204
+ + ++ +NA+++ LG+ ++F + + D+M L++++T+ ++ RYA A V
Sbjct: 119 ENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKV 178
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNII 263
+EAIG F + +EFG + S F +L L + ++V A+ F+ +K F DIK+ I+
Sbjct: 179 KEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTIL 238
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L GW N+ +++ EPD V Y +NA K K A+R F M ++
Sbjct: 239 LEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNC 298
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
KP +I+ L +K++ +ALE K+ G TYN+L+ C +RME Y+
Sbjct: 299 KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYK 358
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+DEM K PN T++ +L L + + E + C+ + TY ++++++ N
Sbjct: 359 TVDEMRLKGVG--PNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCN 416
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ D W+EM+ KG+ P ++ +I L + +L++A YF+EM G+ P
Sbjct: 417 KERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 7/243 (2%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI---LLNRYAAAHMVEEAI 208
+ P + I++ +A+++ E I+ F+EM + + I L+N + + +A+
Sbjct: 263 FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 322
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGW 267
F+R K G + + L+ C + +E A +T E G + +T +IIL+
Sbjct: 323 EFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHL 382
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
+ EA ++ + CEP TY V K +L A++++ M KG P +
Sbjct: 383 IRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGM 439
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I ALC + ++ EA E EM + G P ++ L + L R + V + + +
Sbjct: 440 HMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVK 499
Query: 388 MEQ 390
M++
Sbjct: 500 MDR 502
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 227/460 (49%), Gaps = 21/460 (4%)
Query: 74 ANSDEKSEFQRYPGDE-------IAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIV 126
+ SD + F PG ++ + + + S + I L+ +T++ L+
Sbjct: 65 SESDVEPRFTVVPGAAQEGLAPGVSEAAERVCRVVSAQPEHRIAPVLDALGVTVSPQLVA 124
Query: 127 NVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--D 184
V+ A FF+W R+ + + F+ +++ LG+ ++F + + + M
Sbjct: 125 EVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRS 184
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
+++ T+ I++ RYA A V+EA+ F++ FG DLS + L+ L + K V+ A
Sbjct: 185 CLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHA 244
Query: 245 FFES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
F+ K F D+KT +++ GW ++ K +++++ + +PD V Y ++A
Sbjct: 245 IFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAF 304
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K GK A+++F M E G P +I+ L +R+ EAL+ + K G V
Sbjct: 305 CKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEV 364
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN----EITFNYLLKSLKKPEEVPWV 418
T N++I C+ ++ +DEM + PN +I N+L+KS +K EE +
Sbjct: 365 PTCNAVIGAYCRALEFHHAFKMVDEMRKSGIG--PNTRTYDIILNHLIKS-EKIEEAYNL 421
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+RMER+GC+ +TY +++ ++ + + D W++M++KG+ P ++ +I+GL
Sbjct: 422 FQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCF 481
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG 518
RLE+A YF EM KG+ P G L +++ L E G
Sbjct: 482 DNRLEEACVYFQEMLDKGIRP---PGQLFSNLKEALVEGG 518
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 129/293 (44%), Gaps = 45/293 (15%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+ FK + R+G + P + +++ G + + L V+ EM PD+V YG
Sbjct: 242 AHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVV---AYG 298
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKN 251
+L++ + + +EAI VF +E G + + L+ L + ++ A +F+ S+++
Sbjct: 299 MLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKES 358
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
F ++ T N ++ +C + A + ++ KS P++ TY +N L K K+ A
Sbjct: 359 GFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEA 418
Query: 312 LRLFQAM-------------------------------WEKGRKPDVVTC----NCIIDA 336
LFQ M W++ ++ V+ C + +I+
Sbjct: 419 YNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALING 478
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
LCF R+ EA +EM ++G P +++L + L + R+ E +E
Sbjct: 479 LCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQRLE 531
>gi|115476116|ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|125603197|gb|EAZ42522.1| hypothetical protein OsJ_27088 [Oryza sativa Japonica Group]
gi|215740653|dbj|BAG97309.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 511
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 191/382 (50%), Gaps = 26/382 (6%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGV 210
S ++ ++A++D LGRAR+F ++ E +T+ +L RY AA M +A+
Sbjct: 100 SRAADAYDAVVDALGRARQFDAAWRLVVEAAADGAATPRTFAVLARRYVAAGMTRQAVRA 159
Query: 211 FDRRKEF-GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCV 269
FD + F G D + F LL LC+YK+ +VA F K ++ + K +++ GWC
Sbjct: 160 FDDMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWCK 219
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR----------LFQAMW 319
+ A++F KD+I EP+ VTY +N + + L R L + M
Sbjct: 220 VNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMH 279
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
++G +P+V + + I+ + L + R MK RG P V TY S+IK L R++
Sbjct: 280 QRGIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLD 339
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTD--TY 434
LDEM + G C P+ T+N K + ++V L+ +M+ G + D TY
Sbjct: 340 DAESLLDEMASE-GVC-PSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTY 397
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N++L +++ + D V W +M + +GPD SYT+++HGL D + +A +F EM
Sbjct: 398 NILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIE 457
Query: 495 KGMVPEPRT------GILVNDM 510
+G +P+ T G++ DM
Sbjct: 458 RGFLPQKITFETLYRGLIQADM 479
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 3/197 (1%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N +Y ++L+ Y+ AH E + +F KE G ++ + +++ L ++ AE+
Sbjct: 286 NVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDAESLL 345
Query: 247 ESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDI--IKSKCEPDSVTYATFVNALT 303
+ +E T N + +V A + + + S PD TY +
Sbjct: 346 DEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILLGMFI 405
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K + T ++++ M E PD+ + ++ LC K+ EA + EM RG LP
Sbjct: 406 KLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFLPQKI 465
Query: 364 TYNSLIKHLCKIKRMET 380
T+ +L + L + + T
Sbjct: 466 TFETLYRGLIQADMLRT 482
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 6/183 (3%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
+E P + +++ L R + + DEM + TY Y V
Sbjct: 314 KERGICPTVATYTSVIKCLASCGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDV 373
Query: 205 EEAIGVFDRRKEFGE--LDDLSAFQNLL-LWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
A+ ++++ K G D+ + LL +++ +H V + + + ++ G D+ +
Sbjct: 374 NGALQLYNKMKAPGSPATPDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYT 433
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++++G C EA +F+ ++I+ P +T+ T L + L T RL + + E+
Sbjct: 434 LLVHGLCDNKKWREACQFFMEMIERGFLPQKITFETLYRGLIQADMLRTWRRLKKRVDEE 493
Query: 322 GRK 324
K
Sbjct: 494 AAK 496
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 207/406 (50%), Gaps = 8/406 (1%)
Query: 104 STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAIL 163
S+ + +AL C +++++ L+ V+ R+ DW A+ FFKW + Y N +N+++
Sbjct: 101 SSADAVVQALGGCGVSVSESLVEQVLKRFSNDWIPAFGFFKWAKAQTGYRHSMNSYNSMV 160
Query: 164 DVLGRARRFV---ELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
D+LG+ ++F EL++ D + V+ T ++ R A A ++AI F + FG
Sbjct: 161 DILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVK 220
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D A L+ L + VE A F K+ + T N++++GWC + A +
Sbjct: 221 KDTLAMNTLMDALVKENSVEHANDVFVEFKDSILLNPHTFNVLIHGWCKARKMDNALKSM 280
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
++ + PD ++Y + V A ++ + M EKG P+VVT ++ AL
Sbjct: 281 AEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKG 340
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
K I +ALEV +MK C+P+ + Y+SLI L K R++ + ++M ++ +P+ +
Sbjct: 341 KEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGA--IPDVL 398
Query: 401 TFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T+N ++ + + E+ +L +ME + CK +TY+ +LK+ + + M
Sbjct: 399 TYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHM 458
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K + + +Y++++HGL G+LE A +F EM KG+VP+ T
Sbjct: 459 FKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVPKDCT 504
>gi|356531098|ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 204/403 (50%), Gaps = 16/403 (3%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E AL Q + L+ L+ ++R R+D + A FF W + DYS +N ++D+L
Sbjct: 10 MENALGQLGIPLSTPLVTGGLHRLRYDEKIALRFFTWAGHQEDYSHEPCAYNDMMDILSS 69
Query: 169 ARRFVELIQVFDEMPD--------LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
R V+ ++ ++ + +V + ++L +Y ++ +R
Sbjct: 70 TRYKVKQFRIVCDVLEYMKRNNRTMVPAEVLLVILRKYTEKYLTHMQKFAKKKRIRVKTQ 129
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
+++AF LL LC+ VE AE+ ++ + + +T NI++ GWC + N +
Sbjct: 130 LEINAFNLLLDALCKCCLVEDAESLYKKMRKTVKPNAETYNILVFGWCRVRNPTRGMKLL 189
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR---KPDVVTCNCIIDAL 337
+++I+ PD+ TY T ++ K G + A+ LF+ M KG P T II AL
Sbjct: 190 EEMIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVAL 249
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
R+ + +++ M + GCLP+VTTY +I+ +C +++ Y++L+EM N S P
Sbjct: 250 AQHDRMEDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLEEM--GNKSYRP 307
Query: 398 NEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+ +T+N LK L KK E+ + RM C S TYN+++ ++ D D TW
Sbjct: 308 DIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETW 367
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+E++ +G PD +Y VMI GL++ ++EDA E+ +G+
Sbjct: 368 QEIDNRGCRPDTDTYCVMIEGLFNCNKMEDACFLLEEVINEGV 410
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 127/292 (43%), Gaps = 13/292 (4%)
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPDLV--NEKTYGILLNRYAAAHMVEEAIGVFDRR 214
N FN +LD L + + ++ +M V N +TY IL+ + + + +
Sbjct: 133 NAFNLLLDALCKCCLVEDAESLYKKMRKTVKPNAETYNILVFGWCRVRNPTRGMKLLEEM 192
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDI-----KTMNIILNGWCV 269
E G D + + C+ + A FE + + G I KT II+
Sbjct: 193 IELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTK-GSTISSPTAKTYAIIIVALAQ 251
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ + + +I S C PD TY + + GK+ A + + M K +PD+VT
Sbjct: 252 HDRMEDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPDIVT 311
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
NC + LC K+ +AL++ M C+P+V TYN LI ++ + +E E++
Sbjct: 312 YNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETWQEID 371
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
N C P+ T+ +++ L K E+ ++LE + G K+ ++ L
Sbjct: 372 --NRGCRPDTDTYCVMIEGLFNCNKMEDACFLLEEVINEGVKLPYKKFDSFL 421
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 103/249 (41%), Gaps = 7/249 (2%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP------DLVNEKTYGILLNRYAAAH 202
E + P + +N +D + E + +F+ M KTY I++ A
Sbjct: 194 ELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVALAQHD 253
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMN 261
+E+ + G L D++ ++ ++ +C ++ A F E N+ + DI T N
Sbjct: 254 RMEDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPDIVTYN 313
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
L C +A + + +I+ C P TY ++ + A +Q + +
Sbjct: 314 CFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETWQEIDNR 373
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G +PD T +I+ L ++ +A +L E+ N G ++S + L I ++ +
Sbjct: 374 GCRPDTDTYCVMIEGLFNCNKMEDACFLLEEVINEGVKLPYKKFDSFLMQLSVIGDLQAI 433
Query: 382 YEYLDEMEQ 390
+ + M++
Sbjct: 434 HRLSEHMKK 442
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 9/176 (5%)
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N ++DALC + +A + ++M+ + PN TYN L+ C+++ + L+EM +
Sbjct: 136 NLLLDALCKCCLVEDAESLYKKMR-KTVKPNAETYNILVFGWCRVRNPTRGMKLLEEMIE 194
Query: 391 KNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT---YNVILKLYVNW 444
P+ T+N + + K E + E M G +S+ T Y +I+
Sbjct: 195 LGHR--PDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVALAQH 252
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D + M G PD +Y +I G+ G++++A + EM K P+
Sbjct: 253 DRMEDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPD 308
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 219/439 (49%), Gaps = 8/439 (1%)
Query: 87 GDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWV 146
++++ + I K S T ++E LN+ + L+ LI V+ + A + FKW
Sbjct: 61 ANDVSQDADKICKILSKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWA 120
Query: 147 SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMV 204
+ + ++ +NA+++ LG+ ++F + + D+M L+++ T+ ++ RYA A V
Sbjct: 121 ENQKGFKHTTSNYNALIESLGKIKQFKLIWNLVDDMKQKKLLSKDTFALISRRYARARKV 180
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNII 263
+EAI F + +++G + S F +L L + ++V A+ F+ +K F DIK+ I+
Sbjct: 181 KEAITAFHKMEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKSYTIL 240
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L GW N+ + ++ EPD V Y +NA K K A+R F M ++
Sbjct: 241 LEGWGQELNLLRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNC 300
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
KP +I+ L +K++ +ALE K+ G TYN+L+ C +RME ++
Sbjct: 301 KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFK 360
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+DEM K PN T++ +L L + + E ++ C+ + TY ++++++ N
Sbjct: 361 TVDEMRSKGIG--PNARTYDIILHHLIRMQRTKEAYEVYQKMSCEPTVSTYEIMVRMFCN 418
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ D W+EM+ KG+ P ++ +I L + +L++A YF+EM G+ P
Sbjct: 419 KERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP---P 475
Query: 504 GILVNDMNIKLKERGEQGK 522
G L + + L + G + K
Sbjct: 476 GHLFSRLKQTLLDEGRKDK 494
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 110/243 (45%), Gaps = 7/243 (2%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI---LLNRYAAAHMVEEAI 208
+ P + I++ +A+++ E ++ F+EM + + I L+N + + +A+
Sbjct: 265 FEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 324
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGW 267
F+R K G + + L+ C + +E A +T E G + +T +IIL+
Sbjct: 325 EFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHL 384
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
+ EA ++ K CEP TY V K +L A++++ M KG P +
Sbjct: 385 IRMQRTKEAYEVYQ---KMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGM 441
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I ALC + ++ EA E EM + G P ++ L + L R + V + +
Sbjct: 442 HMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVADLAVK 501
Query: 388 MEQ 390
M++
Sbjct: 502 MDR 504
>gi|225427504|ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Vitis vinifera]
Length = 709
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 209/412 (50%), Gaps = 20/412 (4%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNA 161
+ + + ++EKAL+ + LT DL++ ++ + F+ + A+ FF W + YS +N
Sbjct: 246 NANPESDMEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQDCYSHEPRAYNE 305
Query: 162 ILDVLGRARRFVELIQVFDEMPDLV--NEK------TYGILLNRYAAAHMVEEAIGVFDR 213
++D+L + V+ ++ +M D + N+K ++L +Y H+ + F +
Sbjct: 306 MIDILSSTKYKVKQFRIVCDMLDYMKRNDKKSVPVEVLLMILRKYTEKHLAH--LHKFAK 363
Query: 214 RKEF--GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
+K+ +++A LL LC+ VE A+ F KN+ D T NI+ GWC +
Sbjct: 364 KKKIRVKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANTYNILFFGWCRVR 423
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR---KPDVV 328
N R +++I+ PDS TY T +++ K G + A LF+ M KG P
Sbjct: 424 NPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAK 483
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +I AL R E +++++M N G LP+V+TY +I+ +C ++E Y++L+EM
Sbjct: 484 TYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEM 543
Query: 389 EQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
K P+ +T+N L L KK EE + RM GC S T+N+++ ++
Sbjct: 544 GNKGYR--PDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIG 601
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
D TW EM+K+G D +Y VMI GL++ ++EDA E+ KG+
Sbjct: 602 EPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVVNKGI 653
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 9/183 (4%)
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+P++ N ++DALC + +A + R +KN+ P+ TYN L C+++
Sbjct: 372 QPEINALNLLLDALCKCSLVEDAQAMFRRVKNK-VKPDANTYNILFFGWCRVRNPSRGMR 430
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT---YNVI 437
L+EM + + P+ T+N + S K E + E M G MS+ T Y ++
Sbjct: 431 VLEEMIEMGHT--PDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIM 488
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ V D ++ ++M G+ PD +Y +I G+ G++E+A + EM KG
Sbjct: 489 ILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGY 548
Query: 498 VPE 500
P+
Sbjct: 549 RPD 551
>gi|449442339|ref|XP_004138939.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Cucumis sativus]
Length = 559
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 206/407 (50%), Gaps = 22/407 (5%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
++E AL+Q + LT DL+ ++++R RFD + A+ FF W +R+ +YS V+N ++D+L
Sbjct: 102 DMEGALDQVGVYLTTDLVADILHRLRFDEKLAFRFFTWAARQENYSHEPRVYNEMIDILS 161
Query: 168 RARRFVELIQVFDEMPDLVN---------EKTYGILLNRYAAAHMVEEAIGVFDRRKE-- 216
R V+ ++ ++ D + E +GIL N Y ++ + F ++K+
Sbjct: 162 STRYKVKQFRIVCDLLDYMKRNDKNTVPVEVLFGILRN-YTDKYLT--CLQKFAKKKKVI 218
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEA 276
+++AF LL LC+ VE AE + K + D T NI+ GWC + N
Sbjct: 219 VKRQPEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDANTYNIMFFGWCRVRNPGRG 278
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG---RKPDVVTCNCI 333
R +++I+ +PD+ TY T + + K G L A LF+ M KG P T +
Sbjct: 279 MRVLEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIM 338
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I AL R+ E + L M GCLP+V+TY +I+ +C +++ Y +L+EM +K
Sbjct: 339 IVALVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKGY 398
Query: 394 SCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
P+ +T+N LK L K ++ +RM GC S TYN+++ ++ + +
Sbjct: 399 P--PDIVTYNCFLKVLCDNKMSDDALRHCDRMIEVGCLPSVQTYNMLISMFFEMNDHNGA 456
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
W EM++ G D SY +MI GL+ ++ DA E+ KGM
Sbjct: 457 FQIWLEMDRYGCTRDVDSYCIMIEGLFGCNKVGDACLLLEEVVNKGM 503
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 128/346 (36%), Gaps = 40/346 (11%)
Query: 154 PGSNVFNAILDVLGRARRF--VELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
P N FN +LD L + E + + + TY I+ + + V
Sbjct: 223 PEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDANTYNIMFFGWCRVRNPGRGMRVL 282
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY----DIKTMNIILNGW 267
+ E G D + + C+ ++ A FE + + KT I++
Sbjct: 283 EEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIVAL 342
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
G + E +F + +IKS C PD TY + + GK+ A + M +KG PD+
Sbjct: 343 VNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKGYPPDI 402
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT NC + LC K +AL M GCLP+V TYN LI E
Sbjct: 403 VTYNCFLKVLCDNKMSDDALRHCDRMIEVGCLPSVQTYNMLISMFF-------------E 449
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
M NG+ F L+ M+R GC D+Y ++++ +
Sbjct: 450 MNDHNGA-------FQIWLE--------------MDRYGCTRDVDSYCIMIEGLFGCNKV 488
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
EE+ KGM R + + L G L+ MR
Sbjct: 489 GDACLLLEEVVNKGMKLPFRKFDSFLMQLSVNGNLKGIHRLSEHMR 534
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
R+P++ N ++DALC K + E E L + + P+ TYN + C+++
Sbjct: 221 RQPEINAFNLLLDALC-KCSLVEDAEALLKKVKKKLKPDANTYNIMFFGWCRVRNPGRGM 279
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT---YNV 436
L+EM + P+ T+N + S K +E + E M G +S+ T Y +
Sbjct: 280 RVLEEMIELGFD--PDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAI 337
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ VN ++ E M K G PD +Y MI G+ G++++A + EM KG
Sbjct: 338 MIVALVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKG 397
Query: 497 MVPE 500
P+
Sbjct: 398 YPPD 401
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 209/414 (50%), Gaps = 11/414 (2%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
+ ++ L+ + + A +FF+W ++ + + ++A+++ LG+ ++F +
Sbjct: 1 MEVSPSLVFEALKKLSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWN 60
Query: 178 VFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+ +M L+N++T+ ++ RYA A V+EA+ F + ++FG + S LL LC+
Sbjct: 61 LVTDMKQKGLLNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCK 120
Query: 236 YKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ VE A+ F+ K F DIK+ I+L GW N+ + ++ EPD VT
Sbjct: 121 SRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVT 180
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y +NA K + A+ LF M K KP +I+ L +KR+ EALE K
Sbjct: 181 YGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSK 240
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KK 411
G +P TYN+++ C +RM+ V +DEM + G P+ T++ +L L K
Sbjct: 241 ASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEM--RKGGVGPSARTYDIILHHLIRAGK 298
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
+ V ++M GC+ S TY +I++++ N D D W++M+ KG+ P ++
Sbjct: 299 TKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFST 358
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVI 525
+I+ L + +L++A YF EM G+ P + L +++ L + G++ V+
Sbjct: 359 LINSLCHESKLDEACMYFQEMLDVGIRPPAQ---LFSNLKQNLLDEGKKDTVVV 409
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 213/416 (51%), Gaps = 9/416 (2%)
Query: 94 VQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS 153
V ILK T ++ ALN C + T++LI ++NR+ DW A F W + Y
Sbjct: 104 VSEILKKHYPCTDSVVQ-ALNDCGVNPTNNLISQLLNRFCNDWVPALGLFTWAKHQTGYV 162
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
++++ ++D+LGR ++F + ++ EM +L V+ T ++ R A A ++A+
Sbjct: 163 HPPDLYDLMVDILGRRKKFSFMWELVKEMENLEGYVSLVTMKKVMRRLARAGNFQDAVEA 222
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
F ++ G D+ A L+ L + VE A + F K+ D ++ NI+L+G+C
Sbjct: 223 FRGIEKLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKDSIHVDFQSFNILLHGYCKA 282
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
+ +A++ ++ K +P+ V+Y F+ K +F M EK KP+V+T
Sbjct: 283 RKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITY 342
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+ AL K++ +ALEV MK+ C+P+ + Y+SLI L + R++ ++ ++M++
Sbjct: 343 TIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKK 402
Query: 391 KNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ S P+ +T+N ++ S + E +L RME + CK TY +LK+
Sbjct: 403 QGVS--PDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRI 460
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ M K + D +Y +++ GL G+LE A S+F EM +KG++P RT
Sbjct: 461 KVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACSFFEEMVMKGLIPRDRT 516
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 98/228 (42%), Gaps = 10/228 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P + +++ + + F + +F EM P+++ TY I ++ A V
Sbjct: 300 FQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVI---TYTIFMHALGKAKQVN 356
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIIL 264
+A+ V++ K + D S + +L+ L + ++ A FE K + D+ T N ++
Sbjct: 357 KALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMI 416
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C A + + + + C+PD TYA + +K ++ L M++
Sbjct: 417 TSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNIS 476
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
D+ T ++ LC ++ A EM +G +P TY L++ L
Sbjct: 477 IDLGTYVLLVGGLCKSGKLELACSFFEEMVMKGLIPRDRTYKMLVEEL 524
>gi|147782978|emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
Length = 708
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 209/412 (50%), Gaps = 20/412 (4%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNA 161
+ + + ++EKAL+ + LT DL++ ++ + F+ + A+ FF W + YS +N
Sbjct: 219 NANPESDMEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQDCYSHEPRAYNE 278
Query: 162 ILDVLGRARRFVELIQVFDEMPDLV--NEK------TYGILLNRYAAAHMVEEAIGVFDR 213
++D+L + V+ ++ +M D + N+K ++L +Y H+ + F +
Sbjct: 279 MIDILSSTKYKVKQFRIVCDMLDYMKRNDKKSVPVEVLLMILRKYTEKHLAH--LHKFAK 336
Query: 214 RKEF--GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
+K+ +++A LL LC+ VE A+ F KN+ D T NI+ GWC +
Sbjct: 337 KKKIRVKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANTYNILFFGWCRVR 396
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR---KPDVV 328
N R +++I+ PDS TY T +++ K G + A LF+ M KG P
Sbjct: 397 NPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAK 456
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +I AL R E +++++M N G LP+V+TY +I+ +C ++E Y++L+EM
Sbjct: 457 TYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEM 516
Query: 389 EQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
K P+ +T+N L L KK EE + RM GC S T+N+++ ++
Sbjct: 517 GNKGYR--PDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIG 574
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
D TW EM+K+G D +Y VMI GL++ ++EDA E+ KG+
Sbjct: 575 EPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVINKGI 626
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 9/183 (4%)
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+P++ N ++DALC + +A + R +KN+ P+ TYN L C+++
Sbjct: 345 QPEINALNLLLDALCKCSLVEDAQAMFRRVKNK-VKPDANTYNILFFGWCRVRNPSRGMR 403
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT---YNVI 437
L+EM + + P+ T+N + S K E + E M G MS+ T Y ++
Sbjct: 404 VLEEMIEMGHT--PDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIM 461
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ V D ++ ++M G+ PD +Y +I G+ G++E+A + EM KG
Sbjct: 462 ILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGY 521
Query: 498 VPE 500
P+
Sbjct: 522 RPD 524
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 225/441 (51%), Gaps = 14/441 (3%)
Query: 86 PGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
PG +++ + + + S + I AL+ + ++ +L+ V+ A FF+W
Sbjct: 91 PGSDVSEVAERVCRVVSSQPEPRIASALDALGVNMSPELVAEVLRNLSNAGILALAFFRW 150
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHM 203
R+ + + F+ +++ LG+ ++F + + + M L+++ T+ +++ RYA A
Sbjct: 151 AERQQGFRYTAESFHNLIEALGKIKQFRLVWSLVEAMRCRGLLSKDTFRLIVRRYARARK 210
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK--NEFGYDIKTMN 261
V+EA+ F++ FG DLS + L+ L + K V+ A F+ K F D+KT
Sbjct: 211 VKEAVETFEKMSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYT 270
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ GW ++ K +++++ + +PD V Y T +++ K GK A+++F+ M
Sbjct: 271 VLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEAN 330
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P +I+ L ++R+ EAL+ K G V T N+++ C+ + +
Sbjct: 331 GCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHA 390
Query: 382 YEYLDEMEQKNGSCLPN----EITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVI 437
++ +DEM + PN +I YL+KS +K EE V +RM GC+ +TY ++
Sbjct: 391 FKMVDEMRKTGIG--PNARTYDIILQYLIKS-QKIEEAYNVFQRMGMEGCEPQLNTYTMM 447
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ ++ + + D W++M++KG+ P ++ +I+GL + RLE+A YF EM KG+
Sbjct: 448 VGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGI 507
Query: 498 VPEPRTGILVNDMNIKLKERG 518
P G L +++ L E G
Sbjct: 508 RP---PGQLFSNLKEALIEGG 525
>gi|449505615|ref|XP_004162522.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73400, mitochondrial-like [Cucumis sativus]
Length = 559
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 206/407 (50%), Gaps = 22/407 (5%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
++E AL+Q + LT DL+ ++++R RFD + A+ FF W +R+ +YS V+N ++D+L
Sbjct: 102 DMEGALDQVGVYLTTDLVADILHRLRFDEKLAFRFFTWAARQENYSHEPRVYNEMIDILS 161
Query: 168 RARRFVELIQVFDEMPDLVN---------EKTYGILLNRYAAAHMVEEAIGVFDRRKE-- 216
R V+ ++ ++ D + E +GIL N Y ++ + F ++K+
Sbjct: 162 STRYKVKQFRIVCDLLDYMKRNDKNTVPVEVLFGILRN-YTDKYLT--CLQKFAKKKKVI 218
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEA 276
+++AF LL LC+ VE AE + K + D T NI+ GWC + N
Sbjct: 219 VKRQPEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDANTYNIMXFGWCRVRNPGRG 278
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG---RKPDVVTCNCI 333
R +++I+ +PD+ TY T + + K G L A LF+ M KG P T +
Sbjct: 279 MRVLEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIM 338
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I AL R+ E + L M GCLP+V+TY +I+ +C +++ Y +L+EM +K
Sbjct: 339 IVALVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKGY 398
Query: 394 SCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
P+ +T+N LK L K ++ +RM GC S TYN+++ ++ + +
Sbjct: 399 P--PDIVTYNCFLKVLCDNKMSDDALRHCDRMIEVGCLPSVQTYNMLISMFFEMNDHNGA 456
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
W EM++ G D SY +MI GL+ ++ DA E+ KGM
Sbjct: 457 FQIWLEMDRYGCTRDVDSYCIMIEGLFGCNKVGDACLLLEEVVNKGM 503
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 128/346 (36%), Gaps = 40/346 (11%)
Query: 154 PGSNVFNAILDVLGRARRF--VELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
P N FN +LD L + E + + + TY I+ + + V
Sbjct: 223 PEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDANTYNIMXFGWCRVRNPGRGMRVL 282
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY----DIKTMNIILNGW 267
+ E G D + + C+ ++ A FE + + KT I++
Sbjct: 283 EEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIVAL 342
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
G + E +F + +IKS C PD TY + + GK+ A + M +KG PD+
Sbjct: 343 VNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKGYPPDI 402
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT NC + LC K +AL M GCLP+V TYN LI E
Sbjct: 403 VTYNCFLKVLCDNKMSDDALRHCDRMIEVGCLPSVQTYNMLISMFF-------------E 449
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
M NG+ F L+ M+R GC D+Y ++++ +
Sbjct: 450 MNDHNGA-------FQIWLE--------------MDRYGCTRDVDSYCIMIEGLFGCNKV 488
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
EE+ KGM R + + L G L+ MR
Sbjct: 489 GDACLLLEEVVNKGMKLPFRKFDSFLMQLSVNGNLKGIHRLSEHMR 534
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
R+P++ N ++DALC K + E E L + + P+ TYN + C+++
Sbjct: 221 RQPEINAFNLLLDALC-KCSLVEDAEALLKKVKKKLKPDANTYNIMXFGWCRVRNPGRGM 279
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT---YNV 436
L+EM + P+ T+N + S K +E + E M G +S+ T Y +
Sbjct: 280 RVLEEMIELGFD--PDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAI 337
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ VN ++ E M K G PD +Y MI G+ G++++A + EM KG
Sbjct: 338 MIVALVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKG 397
Query: 497 MVPE 500
P+
Sbjct: 398 YPPD 401
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 215/420 (51%), Gaps = 8/420 (1%)
Query: 89 EIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR 148
E A + I K K E++ +L++ + ++ ++ NV+ R+ AY FF+W +
Sbjct: 10 ETADPTKRICKIMISCPKLELDTSLSESGIRVSPIVVENVLKRFENAGMLAYQFFEWAGK 69
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL--VNEKTYGILLNRYAAAHMVEE 206
+ +Y+ ++ +++ L + R++ + + ++M L +N +T+ I++ +YA + V+E
Sbjct: 70 QRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVETFCIIMRKYARSQKVKE 129
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNG 266
A+ F+ +++ +L+AF +LL LC+ K+V A+ F K++F D KT +I+L G
Sbjct: 130 AVYTFNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFIPDSKTYSILLEG 189
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
W N+ +A+ +++++ C+PD VTY V+ L K G++ A+ + + M KP
Sbjct: 190 WGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPT 249
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+ ++ + RI +A+ +M+ +V YN+LI CK+ +++ Y L+
Sbjct: 250 SFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLN 309
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM+ K PN T N +L SL +E V RM + C DTY +++K++
Sbjct: 310 EMDCKGIR--PNSRTCNIILNSLISCGDTDEAFRVFRRMIK-VCDPDADTYTMMIKMFCE 366
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D + W+ M K P +++V+I+GL KG A EM KG+ P T
Sbjct: 367 NDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVT 426
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 8/239 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGV 210
P + ++D+L +A R E + + EM V + T Y +L++ Y + +E+A+
Sbjct: 213 PDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYT 272
Query: 211 FDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
F E E++ D++ + L+ C+ ++ A E + + +T NIILN
Sbjct: 273 F-LDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLI 331
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G+ EA R ++ +IK C+PD+ TY + + KL AL++++ M K P +
Sbjct: 332 SCGDTDEAFRVFRRMIKV-CDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMH 390
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T + +I+ LC K +A +L EM +G P+ T+ L + L K R E V E+L E
Sbjct: 391 TFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGR-EDVLEFLQE 448
>gi|224085974|ref|XP_002307761.1| predicted protein [Populus trichocarpa]
gi|222857210|gb|EEE94757.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 195/405 (48%), Gaps = 11/405 (2%)
Query: 103 VSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAI 162
+ K IE+AL +C + L+ D++ V+NR EA FF W ++ S + +N +
Sbjct: 114 IKGKSGIERALTECSVDLSLDVVAEVLNRGNLGGEAMIMFFNWAIKQPMISKDVDSYNVV 173
Query: 163 LDVLGRARRFVELIQVFDEMPDL------VNEKTYGILLNRYAAAHMVEEAIGVF-DRRK 215
+ LGR R+F++ + F + +L +N +T+ I+++ A V +AI +F + +
Sbjct: 174 IRALGR-RKFIDFMVKF--LHELRVEGVSMNSETFSIVIDSLVRARRVYKAIQMFGNLEE 230
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
EFG D + LL LCR HV A ++F S K + ++ T N+I+ GW G V E
Sbjct: 231 EFGFERDAESLNVLLQCLCRRSHVGAANSYFNSVKGKIPFNCMTYNVIIGGWSKFGRVSE 290
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
+R ++++ + PD ++++ + L + GK+ A+ +F +M EKG PD N +I
Sbjct: 291 MQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVPDTNVYNAMIS 350
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
E ++ R + ++ C PN+ TY +I L K ++ E DEM +
Sbjct: 351 NFISVGNFDECMKYYRCLLSKNCDPNIDTYTRMISGLIKASKVADALEMFDEMLDRGMVT 410
Query: 396 LPNEIT-FNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+T F L S P + + + GCK+S Y ++L + + W
Sbjct: 411 KTGTVTSFIEPLCSFGPPHAAMVIYTKARKVGCKISLSAYKLLLMRLSRFGKCGMMLKIW 470
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+EM++ G D Y +I GL + G+ E+A+ E KG P
Sbjct: 471 DEMQESGYSSDMEVYEYLISGLCNIGQFENAVLVMEESMRKGFCP 515
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 9/218 (4%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEK-GRKPDVVTCNCIIDALCFKKRIPEALEV 349
+S T++ +++L + ++ A+++F + E+ G + D + N ++ LC + + A
Sbjct: 201 NSETFSIVIDSLVRARRVYKAIQMFGNLEEEFGFERDAESLNVLLQCLCRRSHVGAANSY 260
Query: 350 LREMKNRGCLP-NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+K G +P N TYN +I K R+ + +EME+ S P+ ++F+YLL+
Sbjct: 261 FNSVK--GKIPFNCMTYNVIIGGWSKFGRVSEMQRVFEEMEEDGFS--PDCLSFSYLLEG 316
Query: 409 LK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L K E+ + ME GC T+ YN ++ +++ D+ + + K P+
Sbjct: 317 LGRAGKIEDAVMIFGSMEEKGCVPDTNVYNAMISNFISVGNFDECMKYYRCLLSKNCDPN 376
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+YT MI GL ++ DAL F EM +GMV + T
Sbjct: 377 IDTYTRMISGLIKASKVADALEMFDEMLDRGMVTKTGT 414
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 8/208 (3%)
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKP----DVVTCNCIIDALCFKKRIPEALEVLREMK 354
V + +G LG + W ++P DV + N +I AL +K I ++ L E++
Sbjct: 136 VAEVLNRGNLGGEAMIMFFNWAI-KQPMISKDVDSYNVVIRALGRRKFIDFMVKFLHELR 194
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
G N T++ +I L + +R+ + +E++ G E + N LL+ L +
Sbjct: 195 VEGVSMNSETFSIVIDSLVRARRVYKAIQMFGNLEEEFGFERDAE-SLNVLLQCLCRRSH 253
Query: 415 VPWVLERMERNGCKMSTD--TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
V K+ + TYNVI+ + + +++ +EEME+ G PD S++ +
Sbjct: 254 VGAANSYFNSVKGKIPFNCMTYNVIIGGWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYL 313
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ GL G++EDA+ F M KG VP+
Sbjct: 314 LEGLGRAGKIEDAVMIFGSMEEKGCVPD 341
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 96/239 (40%), Gaps = 6/239 (2%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVE 205
E +SP F+ +L+ LGRA + + + +F M + + + Y +++ + + +
Sbjct: 300 EDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVPDTNVYNAMISNFISVGNFD 359
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI--I 263
E + + ++ + ++ L + V A F+ E + G KT +
Sbjct: 360 ECMKYYRCLLSKNCDPNIDTYTRMISGLIKASKVADALEMFD-EMLDRGMVTKTGTVTSF 418
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ C G + A + K C+ Y + L++ GK G L+++ M E G
Sbjct: 419 IEPLCSFGPPHAAMVIYTKARKVGCKISLSAYKLLLMRLSRFGKCGMMLKIWDEMQESGY 478
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
D+ +I LC + A+ V+ E +G P+ + L L ++E Y
Sbjct: 479 SSDMEVYEYLISGLCNIGQFENAVLVMEESMRKGFCPSRFICSKLNNKLLASNKVERAY 537
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 208/413 (50%), Gaps = 20/413 (4%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E +L +TL+ L+ + R R + + A +FF + S + +N I+D+L +
Sbjct: 56 MESSLQLHGITLSSSLLHQTLLRLRHNSKIALSFFHYSLSLPSSSVNTTTYNLIIDILSK 115
Query: 169 ARRFV---ELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF-GELDDLS 224
R+F +LI D+ N T+ IL+ R +A +AI FD + F E + +
Sbjct: 116 VRQFDVSWQLIIQMDQNNLQPNSHTFLILIRRLISAGFTRQAIRAFDDMESFIAETVNQT 175
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
F LL LC+Y +++VA F K F +++ +++ GWC +G + A+RF +++
Sbjct: 176 HFCFLLDTLCKYGYIKVAVEVFNKRKFRFLPNVRIYTVLIYGWCKIGRIDMAERFIREMD 235
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGT----------ALRLFQAMWEKGRKPDVVTCNCII 334
+ E + VTY ++ + ++ KL A ++F M +KG +PDV + + ++
Sbjct: 236 EMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSFSILL 295
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ ++ L+ M+ G P V TY S++K LC R++ E L++M + S
Sbjct: 296 HVYSRAHKPQLTVDKLKLMEEMGICPTVATYTSVLKCLCSCGRIDDAEELLEQMVRNGVS 355
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERM-ERNGCKMSTDTYNVILKLYVNWDCEDKV 450
PN T+N K K PE + ++ + N C S TYN++L +++ + + V
Sbjct: 356 --PNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFNIV 413
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
W ++ G GPD SYT+++HGL +K + + A +F EM KG++P+ T
Sbjct: 414 NEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQKAT 466
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 107/261 (40%), Gaps = 24/261 (9%)
Query: 159 FNAILDVLGR----------ARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
+N +LD + R R ++ +VFDEM PD+ ++ ILL+ Y+ AH
Sbjct: 246 YNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVT---SFSILLHVYSRAH 302
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMN 261
+ + +E G ++ + ++L LC ++ AE E +N + T N
Sbjct: 303 KPQLTVDKLKLMEEMGICPTVATYTSVLKCLCSCGRIDDAEELLEQMVRNGVSPNAATYN 362
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+ + A + ++ I + C+P TY + K + ++ +
Sbjct: 363 CFFKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFNIVNEIWNDLRS 422
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G PD+ + ++ LC K++ +A + EM +G LP T+ L L + + T
Sbjct: 423 SGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQKATFEMLYAGLIQSNMLRT 482
Query: 381 ---VYEYLDEMEQKNGSCLPN 398
+ + LDE GS N
Sbjct: 483 WRRLKKKLDEESIAFGSEFSN 503
>gi|242049112|ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
gi|241925677|gb|EER98821.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
Length = 541
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 205/437 (46%), Gaps = 13/437 (2%)
Query: 74 ANSDEKSEFQRYPGDEIAINVQNILKTCSV-----STKGEIEKALNQCELTLTDDLIVNV 128
A+ + + + YP E+ + Q + C V + ++ AL+ LT +V
Sbjct: 27 ASPAGQPDPRPYPVPELDPDPQLVGALCRVLSDFRGPRHDLRAALDGFAPRLTPAAAADV 86
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP-DLVN 187
+ R R + FF + + ++ + L AR F L + ++P ++
Sbjct: 87 LRRCRNLPVPSLRFFLFAAALPGFTHLPESLLILAGSLAGARLFPLLRSLLSDLPRPALS 146
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
+ +L YA A + ++AI F + FG L ++ +LL L VE AE FF
Sbjct: 147 RDLFPLLFRAYARAGLPDDAIRAFSSMERFGFLPTVADLHSLLFTLSHNGLVEHAEAFFR 206
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+F KT I+++GW V+ +A++ + ++I+ +PD Y ++AL + G
Sbjct: 207 ESPIQFDVSAKTYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGD 266
Query: 308 LGTALRLFQAMW-EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ A + M +G PD T + + C K AL VL M+ R PNV TYN
Sbjct: 267 VALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYN 326
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERME 423
++I+ LC++ ++ Y L+EM P+ ++N LL + LK+ + ++ RM+
Sbjct: 327 AVIRLLCELGEVDEAYNILNEMATYGEK--PDVWSYNTLLNTHCKLKEVNKALRLISRMD 384
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY-DKGRL 482
C + +YN+ILK+ + D+ W+ MEK+G P +Y VMIHGL KGR
Sbjct: 385 EGLCLPNRHSYNMILKMLIAIGRVDRAIEVWDGMEKRGFHPGAATYAVMIHGLSCKKGRA 444
Query: 483 EDALSYFHEMRLKGMVP 499
E+A SYF M G+ P
Sbjct: 445 EEACSYFLRMVDDGIPP 461
>gi|125541207|gb|EAY87602.1| hypothetical protein OsI_09013 [Oryza sativa Indica Group]
Length = 555
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 205/416 (49%), Gaps = 19/416 (4%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
+++T + S++G E AL+ LT L+ +V++R R+D + A+ FF W S +G Y +
Sbjct: 88 VIETAAGSSEG-TEAALDALGAELTTPLVADVLHRLRYDEKLAFRFFVWASHQGGYEHEA 146
Query: 157 NVFNAILDVLG----RARRFVELIQVFDEMP-----DLVNEKTYGILLNRYAAAHMVEEA 207
+N ++D+L +AR+F L V D M + + GIL Y H+
Sbjct: 147 ATYNDVIDILSGTRYKARQFGVLCDVLDHMKRRRTRSVPVDDLLGIL-RAYTEKHLTHLR 205
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
RR + A LL C+ V AE F K + + +T +I+ GW
Sbjct: 206 KLAKKRRVRMRTPPETDALNVLLDAFCKSGMVREAEAVFSRVKRKLLGNAETYSILFFGW 265
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR---K 324
C + A + +++I+ K P++ TY +++ G + A LF+ M +G
Sbjct: 266 CRARDPKRAMKVLEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISS 325
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P T + +I AL ++ E E++ EM+ GC+P+V+TY LI+ + + +++ Y
Sbjct: 326 PTAKTYSIMIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCV 385
Query: 385 LDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
LDEM + P+ +T+N LK L+K ++ + ERM C+ S TYN+++ ++
Sbjct: 386 LDEMAKAGFP--PDIVTYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMF 443
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
D+ + W EM+K+G +Y MI GL+D GR EDA + E+ +GM
Sbjct: 444 FEMREPDRAINIWIEMDKRGCHRAVDTYETMIDGLFDSGRTEDATTLLDEVINRGM 499
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 107/246 (43%), Gaps = 7/246 (2%)
Query: 152 YSPGSNVFNAILD------VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVE 205
++P + +NA +D ++ AR E ++ KTY I++ A A +E
Sbjct: 286 HTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKAGQME 345
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIIL 264
E + ++ G + D+S +++L+ + ++ A E K F DI T N L
Sbjct: 346 ECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNCFL 405
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C L +A + +I++ CEP TY + + + A+ ++ M ++G
Sbjct: 406 KVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMDKRGCH 465
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
V T +ID L R +A +L E+ NRG + +++++ L + + ++
Sbjct: 466 RAVDTYETMIDGLFDSGRTEDATTLLDEVINRGMKLSYKKFDAIMLRLSAVGNLGAIHRL 525
Query: 385 LDEMEQ 390
+ M +
Sbjct: 526 SEHMRR 531
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 206/415 (49%), Gaps = 10/415 (2%)
Query: 93 NVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDY 152
+ + I + S + + ++ +L + ++ +L+V V+N+ A +FF+W ++ +
Sbjct: 57 HAETICRILSTTPESPVDVSLRNFPVEVSPELVVAVLNKLSNAGILALSFFRWAEKQQGF 116
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGV 210
+ + +F+A+++ LG+ R+F + + DEM L+N T+ ++ RY A +++EA+
Sbjct: 117 NHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRKLLNGDTFSLIARRYVRAKVIKEALKT 176
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYK-HVEVAETFFESEKN-EFGYDIKTMNIILNGWC 268
F+R +++G +S F L+ LC+ K HVE A+ F+ + ++K+ I++ GW
Sbjct: 177 FERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWS 236
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
N+ + +++ +PD VTY +NA K K A+ ++ M K P
Sbjct: 237 QQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPH 296
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
I L R+ EA E + K G P TYN+++ C R++ Y + EM
Sbjct: 297 IYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEM 356
Query: 389 EQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERME-RNGCKMSTDTYNVILKLYVNW 444
K PN T++ +L L K +E V +RM GC+ S TY ++++++ N
Sbjct: 357 --KELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNE 414
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ D W EM+ KG+ P ++ +I L + +L+DA YF +M G+ P
Sbjct: 415 NQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRP 469
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 119/271 (43%), Gaps = 13/271 (4%)
Query: 241 VAETFFE-SEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWK--DIIKSKCEPDSVTYA 296
+A +FF +EK + F ++ + + ++ LG + + K W D +K + + T++
Sbjct: 102 LALSFFRWAEKQQGFNHNTEIFHALIEA---LGKIRQFKMIWNLVDEMKQRKLLNGDTFS 158
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK-RIPEALEVLREMKN 355
+ + AL+ F+ M + G KP + N +ID LC K + +A E+ +M+
Sbjct: 159 LIARRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQ 218
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKP 412
PN+ +Y LI+ + + + V E EM K+ P+ +T+ ++ + KK
Sbjct: 219 WNLEPNLKSYTILIEGWSQQQNLLKVDEVCREM--KDDGFQPDVVTYGIIINAYCKAKKY 276
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+E + M S Y + N D+ +E+ + G P+ +Y +
Sbjct: 277 DEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAV 336
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ R++DA EM+ G+ P RT
Sbjct: 337 VSAYCWSMRIDDAYRIVGEMKELGIGPNART 367
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 130/315 (41%), Gaps = 47/315 (14%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
+++V+ + +F E A F + R+ + P + +++ + + +++ +V EM
Sbjct: 195 LIDVLCKSKFHVEKAQELFDKM-RQWNLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKD 253
Query: 183 ----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
PD+V TYGI++N Y A +EAIG++ + + L
Sbjct: 254 DGFQPDVV---TYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSR 310
Query: 239 VEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK--------------DI 283
++ A FFE S+ + F + T N +++ +C + +A R DI
Sbjct: 311 MDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDI 370
Query: 284 I----------------------KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I ++ CEP TYA V + +L A+ ++ M +K
Sbjct: 371 ILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDK 430
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P + + +I +LC + ++ +A ++M + G P +++ + L TV
Sbjct: 431 GILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSAFKRALMAAGMENTV 490
Query: 382 YEYLDEMEQKNGSCL 396
+ ++++ + L
Sbjct: 491 IHFAKKVDKLRNTPL 505
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
K +G N +++LI+ L KI++ + ++ +DEM+Q+ L N TF+ + + + +
Sbjct: 112 KQQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRK---LLNGDTFSLIARRYVRAK 168
Query: 414 EVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCE-DKVRHTWEEMEKKGMGPDQRSY 469
+ L ERME+ G K +N ++ + +K + +++M + + P+ +SY
Sbjct: 169 VIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSY 228
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
T++I G + L EM+ G P+ T GI++N
Sbjct: 229 TILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIIN 268
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 231/460 (50%), Gaps = 24/460 (5%)
Query: 76 SDEKSEFQRYPGDE--------IAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVN 127
S E F PGD I+ + + + S + I L+ + ++ +L+
Sbjct: 77 SAEPLRFTVTPGDAFGDGPPVGISEAAKMVCRIVSTQPEPRIASTLDALGVAMSPELVAE 136
Query: 128 VINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DL 185
V+ A FF+W R+ +S + F+ +++ LG+ ++F + + + M L
Sbjct: 137 VLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNLIEALGKIKQFKLVWSLVETMRCRGL 196
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
+++ T+ +++ RYA A V+EA+ F++ FG +LS + L+ L + K V+ A+
Sbjct: 197 LSKDTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAI 256
Query: 246 FES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
++ K +F D+KT +++ GW ++ K ++++I + PD V Y ++A
Sbjct: 257 YKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFC 316
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K GK A+++F M G P +I+ L ++R+ EAL+ + K G V
Sbjct: 317 KSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVP 376
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEM-EQKNGSCLPNEITFN----YLLKSLKKPEEVPWV 418
T N+++ C+ + E ++ +DEM E K G PN T++ YL+KS +K EE V
Sbjct: 377 TCNAVVGAYCRASKFEHAFKMVDEMRECKIG---PNSRTYDVILHYLIKS-QKFEEAYNV 432
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+RM +GC+ +TY +++ ++ + D + W++M ++G+ P ++ +I+GL
Sbjct: 433 FQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCMHMFSALINGLCF 492
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG 518
+ RLE+A YF EM KG+ P G L +++ L E G
Sbjct: 493 ENRLEEACVYFQEMLDKGIRP---PGQLFSNLKEALVEGG 529
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A +K + R+G + P + +++ G + + + ++ EM PD+V YG
Sbjct: 253 AQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVV---AYG 309
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKN 251
+L++ + + +EAI VF + G + + L+ L + ++ A +FE +K+
Sbjct: 310 MLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKS 369
Query: 252 EFGYDIKTMNIILNGWC-----------------------------VLGNVYEAKRF--- 279
F ++ T N ++ +C +L + ++++F
Sbjct: 370 GFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFEEA 429
Query: 280 ---WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
++ + CEP TY V G++ AL +++ M E+G P + + +I+
Sbjct: 430 YNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCMHMFSALING 489
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
LCF+ R+ EA +EM ++G P +++L + L + R+ E +++
Sbjct: 490 LCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRISLAQEMASKLD 542
>gi|449436637|ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
gi|449509164|ref|XP_004163514.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
Length = 547
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 237/513 (46%), Gaps = 43/513 (8%)
Query: 14 EHFQQKFKFHSQLTTQFSKLQSCNSVTSHKTLIPIINLQARNSEFLFLGRIETAQLVHSL 73
+ F Q F HS QFS L S + Q FLF
Sbjct: 36 QAFHQTFSLHSFFARQFSALPSFS--------------QKLGDPFLF------------- 68
Query: 74 ANSDEKSEFQRYPGDEIAINVQNI---LKTCSVSTKGEIEKALNQCELTLTDDLIVNVIN 130
+ FQ Y + A N + I + + ++ E AL++ ++ DL+ + I
Sbjct: 69 ----DTGRFQNYRQSD-ACNARFIELFKRVALLPSEVEAVAALDEFDVKADLDLVYSAIW 123
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-PDLVNE- 188
R DW+++ FKW + G + + N ++ VLG ++F + E+ L+N
Sbjct: 124 VLRDDWKSSLLAFKWGEKVG--AIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNSM 181
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
+ ++++RYA A+ +AI F ++F D AF LL LC+Y ++E AE F
Sbjct: 182 QAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMFV 241
Query: 249 EKNEFGYDIKTMNIILNGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
K F ++ NIILNGWC V +V+EAKR W+++ K PDS +Y ++ +K G
Sbjct: 242 NKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNGN 301
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L +LR + M ++ P V N + L + EAL++L ++K G P+ TTYNS
Sbjct: 302 LFDSLRFYDQMKKRDWIPSVEVYNSLAYVLTRENCFNEALKILEKIKEVGLRPDSTTYNS 361
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC 427
LI LC+ +++ + L M + N S P T++ +++ +L+RM ++G
Sbjct: 362 LISPLCEAGKLDEAKDVLTMMTEDNIS--PTIETYHSFIQAADSKMSFE-LLKRMRQDGL 418
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ T+ ++ + + + W EM++ + P Y+V+I GL G L+ A
Sbjct: 419 GPTEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARE 478
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQ 520
+ EM L G + P+ L+ + ++ + Q
Sbjct: 479 LYDEMILHGFIAHPKIKTLLKEPDLGSIDEARQ 511
>gi|297839849|ref|XP_002887806.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333647|gb|EFH64065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 541
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 218/443 (49%), Gaps = 14/443 (3%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
I + ++ + +L + L D ++I R +W A+ FKW + G
Sbjct: 92 IRHVSELESEADAMASLEESSFDLNHDSFYSLIWELREEWRLAFLAFKWGEKRG--CDDQ 149
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPDLVNE--KTYGILLNRYAAAHMVEEAIGVFDRR 214
+ ++ VLG ++F + +M + + K ++++RYAAA+ +AI FD
Sbjct: 150 KACDLMIWVLGNHQKFNIAWCLIRDMFHVSKDTRKAMFLMMDRYAAANDTIQAIRTFDIM 209
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC-VLGNV 273
+F D AFQ LL LCR+ H+E A+ F + K F D++ NIILNGWC + +V
Sbjct: 210 DKFKHTPDDEAFQGLLYALCRHGHIEKAQEFMLASKKLFPVDVEGFNIILNGWCNIWTDV 269
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EAKR W+++ P+ +Y+ ++ +K G L +LRL+ M ++G P +V N +
Sbjct: 270 TEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIVVYNSL 329
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
+ L + EA+++L +M G P TYNS+I+ LC+ +++ L M +N
Sbjct: 330 LYVLTRENCFHEAMKLLEKMDEEGLKPGSVTYNSMIRPLCEAGKLDVARNVLATMISENL 389
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVIL-KLYVNWDCEDKVRH 452
S P TF+ L+++ + VL +M+ +G + DT+ +IL KL+ E+ ++
Sbjct: 390 S--PTVDTFHAFLEAVNFDTNLE-VLGQMKVSGLGPTEDTFLLILGKLFKGKQPENALK- 445
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNI 512
W EM++ + + Y + GL G LE A + EM+ KG P L+ + +
Sbjct: 446 IWAEMDRFEIVANPALYLATVQGLLSCGWLEKAREIYSEMKSKGFPGNPMLQKLLEEQKV 505
Query: 513 KLKERGEQGKKVIKLTSLGLKGN 535
K G + K I L +G +G
Sbjct: 506 K----GIRKSKRIDLQKVGSQGG 524
>gi|115448805|ref|NP_001048182.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|46805701|dbj|BAD17102.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497356|dbj|BAD19395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537713|dbj|BAF10096.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|125583759|gb|EAZ24690.1| hypothetical protein OsJ_08460 [Oryza sativa Japonica Group]
gi|215704115|dbj|BAG92955.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766866|dbj|BAG99094.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 555
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 204/416 (49%), Gaps = 19/416 (4%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
+++T + S++G E AL+ LT L+ +V++R R+D + A+ FF W S + Y +
Sbjct: 88 VIETAAGSSEG-TEAALDALGAELTTPLVADVLHRLRYDEKLAFRFFVWASHQDGYEHEA 146
Query: 157 NVFNAILDVLG----RARRFVELIQVFDEMP-----DLVNEKTYGILLNRYAAAHMVEEA 207
+N ++D+L +AR+F L V D M + + GIL Y H+
Sbjct: 147 ATYNDVIDILSGTRYKARQFGVLCDVLDHMKRRRTRSVPVDDLLGIL-RAYTEKHLTHLR 205
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
RR + A LL C+ V AE F K + + +T +I+ GW
Sbjct: 206 KLAKKRRVRMRTPPETDALNVLLDAFCKCGMVREAEVVFSRVKRKLLGNAETYSILFFGW 265
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR---K 324
C + A + +++I+ K P++ TY +++ G + A LF+ M +G
Sbjct: 266 CRARDPKRAMKVLEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISS 325
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P T + +I AL ++ E E++ EM+ GC+P+V+TY LI+ + + +++ Y
Sbjct: 326 PTAKTYSIMIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCV 385
Query: 385 LDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
LDEM + P+ +T+N LK L+K ++ + ERM C+ S TYN+++ ++
Sbjct: 386 LDEMAKAGFP--PDIVTYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMF 443
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
D+ + W EM+K+G +Y MI GL+D GR EDA + E+ +GM
Sbjct: 444 FEMREPDRAINIWIEMDKRGCHRAVDTYETMIDGLFDSGRTEDATALLDEVINRGM 499
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 107/246 (43%), Gaps = 7/246 (2%)
Query: 152 YSPGSNVFNAILD------VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVE 205
++P + +NA +D ++ AR E ++ KTY I++ A A +E
Sbjct: 286 HTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKAGQME 345
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIIL 264
E + ++ G + D+S +++L+ + ++ A E K F DI T N L
Sbjct: 346 ECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNCFL 405
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C L +A + +I++ CEP TY + + + A+ ++ M ++G
Sbjct: 406 KVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMDKRGCH 465
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
V T +ID L R +A +L E+ NRG + +++++ L + + ++
Sbjct: 466 RAVDTYETMIDGLFDSGRTEDATALLDEVINRGMKLSYKKFDAIMLRLSAVGNLGAIHRL 525
Query: 385 LDEMEQ 390
+ M +
Sbjct: 526 SEHMRR 531
>gi|224115776|ref|XP_002332054.1| predicted protein [Populus trichocarpa]
gi|222831940|gb|EEE70417.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 219/428 (51%), Gaps = 12/428 (2%)
Query: 103 VSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAI 162
+ ++ E +L++ + +L+ +VI R +W A+ FKW + G +
Sbjct: 5 LPSEAEAMASLDESGIRANQNLVYSVIWELREEWRLAFLAFKWGDKWG--CVDEKACELM 62
Query: 163 LDVLGRARRF-VELIQVFDEMPDLVN-EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
+ VLG R+F I + D L++ K I+++RYAAA++ +AI F +F
Sbjct: 63 VWVLGNHRKFNTAWILIRDLHRSLMSTRKAMLIMIDRYAAANVPGKAIYAFRIMDKFRMT 122
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC-VLGNVYEAKRF 279
D AF LL LC+ ++E AE F K F +++ NIILNGWC + +V+EAKR
Sbjct: 123 PDEEAFYFLLNVLCKNGNIEEAEEFMLVNKKFFPLEVEGFNIILNGWCNICVDVFEAKRI 182
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
W+++ K +PD+ TY ++ +K G L +LRL+ M ++G P + N ++ L
Sbjct: 183 WREMSKYCIDPDATTYTHMISCFSKVGNLFDSLRLYDGMKKRGWVPGIEVYNSLVYILTR 242
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ EAL++L +MK G + TYNS+I+ LC+ K++E + M ++N S P
Sbjct: 243 ENCFKEALKILDKMKETGLQRDSATYNSMIRPLCEAKKLEDARSLMAAMIEENVS--PTI 300
Query: 400 ITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
T++ L+ + EE VL+RM+ G + DT+ ++L + + + W EM++
Sbjct: 301 ETYHAFLQGIVF-EETFEVLDRMKIAGLGPTEDTFLLLLAKFFKLEQPENALKIWVEMKQ 359
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT----GILVNDMNIKLK 515
+ + YTVM+ GL G L A Y+ EMR G +P+ + V D N K K
Sbjct: 360 YEVASNLTHYTVMVEGLARCGLLTKAREYYAEMRSNGYSDDPKIQKMLKVPVQDKNDKRK 419
Query: 516 ERGEQGKK 523
+ G Q K+
Sbjct: 420 KLGGQFKR 427
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 248/499 (49%), Gaps = 34/499 (6%)
Query: 61 LGRIETAQLVH-SLANSDEKSE-----FQRYPGDE--------IAINVQNILKTCSVSTK 106
LGR +Q + ++DE++ F PGD ++ + + + S +
Sbjct: 52 LGRTHVSQFCTVARQSTDERASAEPLRFTVTPGDAFGDGPPVGMSEAAKMVCRIVSTQPE 111
Query: 107 GEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVL 166
+I L+ + ++ +L+ V+ A FF+W R+ +S + F+ +++ L
Sbjct: 112 PKIASTLDALGVAVSPELVAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNLIEAL 171
Query: 167 GRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
G+ ++F + + + M L+++ T+ +++ RYA A V+EA+ F++ FG +LS
Sbjct: 172 GKIKQFRLVWSLVETMRCRGLLSKDTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELS 231
Query: 225 AFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ L+ L + K V+ A+ ++ K +F D+KT +++ GW ++ K +++
Sbjct: 232 DYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQE 291
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+I + PD V Y ++A K GK A+++F M G P +I+ L ++R
Sbjct: 292 MIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEER 351
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ-KNGSCLPNEIT 401
+ EAL+ K G V T N+++ C+ + + ++ +DEM + K G PN T
Sbjct: 352 LDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVG---PNSRT 408
Query: 402 FN----YLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
++ YL+KS +K EE + +RM +GC+ +TY +++ ++ + D W++M
Sbjct: 409 YDVILHYLIKS-QKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQM 467
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517
+KG+ P ++ +I+GL + RLE+A YF EM KG+ P G L ++ LKE
Sbjct: 468 GEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRP---PGQLFSN----LKEA 520
Query: 518 GEQGKKVIKLTSLGLKGNA 536
QG ++ + LK +A
Sbjct: 521 LVQGGRISLAQEVALKLDA 539
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 207/426 (48%), Gaps = 26/426 (6%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E +L + L+ L+ + R R + A +FF W + +S +N I+D+L +
Sbjct: 70 MESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDILAK 129
Query: 169 ARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGVFDRRKEFGELD-DLS 224
R+F Q EM E T + IL+ R +A + +A+ FD F E D D
Sbjct: 130 VRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCFVEKDADSD 189
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
F LL L +Y +V++A F K +F + K I++ GWC + V A+R +++
Sbjct: 190 DFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMV 249
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGT----------ALRLFQAMWEKGRKPDVVTCNCII 334
+ E + VTY +N + ++ L A ++ M +KG +PDV + + +I
Sbjct: 250 ERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSIVI 309
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ L+ LR MK++G P V TY S++K LC R+E E + +M + S
Sbjct: 310 HVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVS 369
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVL----ERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
P+ T+N K + ++ L + E C TYN+++ ++V + + V
Sbjct: 370 --PSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIV 427
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT------G 504
+ W++M+ G GPD SYT++IHGL +K + ++A +F EM KG +P+ T G
Sbjct: 428 QEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRG 487
Query: 505 ILVNDM 510
++ +DM
Sbjct: 488 LIQSDM 493
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 11/212 (5%)
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+V DEM PD+ +Y I+++ Y+ AH E + K+ G ++ + +++
Sbjct: 288 KVLDEMRQKGIEPDVT---SYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVV 344
Query: 231 LWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS-KC 288
LC +E AE + K+ T N + + A R ++ + + C
Sbjct: 345 KCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSC 404
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
PD TY V K ++ ++ M G PD+ + +I LC K++ EA
Sbjct: 405 LPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACH 464
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
EM +G LP T+ +L + L + ++T
Sbjct: 465 FFVEMIEKGYLPQKITFETLYRGLIQSDMLKT 496
>gi|359474664|ref|XP_003631508.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80550, mitochondrial-like [Vitis vinifera]
Length = 384
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 179/322 (55%), Gaps = 13/322 (4%)
Query: 132 YRFDWEAAYTFFKWVSREGDYS-PGSNVFNAILDVLGRARRFV---ELIQVFDEMPDLV- 186
Y DW+ A FF WV + ++ P +N ++D+L + F LIQ P V
Sbjct: 38 YANDWKRALEFFNWVQTQSGFNHPTDTSYNRMIDILSKFFEFYLVWVLIQRMKARPSCVP 97
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N T+ I+ YA+AH+VEEA+ +DR +EF D + + NL+ LC YKHV AE F
Sbjct: 98 NHATFCIVFKHYASAHLVEEAMNAYDRTEEFN-FKDETRYSNLIDALCEYKHVIEAEELF 156
Query: 247 --ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI-IKSKCEPDSVTYATFVNALT 303
ES+ F D+K ++IL GW +G + + FW+++ +S C+ +Y+ +++
Sbjct: 157 IRESKDLVFNDDVKIYDMILRGWFKMGXWKKCREFWEEMDWRSGCK-SLCSYSIYMDIQC 215
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K G+ A++L++ M G + DVV N +I A+ + + ++ V REMK GC PNV
Sbjct: 216 KGGRPWRAVKLYKEMKTXGIRLDVVAYNAVIRAIGLSEGVDFSIRVYREMKELGCEPNVV 275
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME 423
TY+++IK LC+ R+ Y LD+M +K+ C PN +T++ L+KP+++ + +RM
Sbjct: 276 TYDTIIKLLCEHGRIREAYGVLDQMREKD--CAPNVMTYHCFFGCLEKPKQIFRMFDRMI 333
Query: 424 RN-GCKMSTDTYNVILKLYVNW 444
+ G DTY +++K + W
Sbjct: 334 NSVGGLGRMDTYVMLMKKFGRW 355
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 9/242 (3%)
Query: 269 VLGNVYEAKRFWKDIIKSK----CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+L +E W I + K C P+ T+ + A+ + E K
Sbjct: 72 ILSKFFEFYLVWVLIQRMKARPSCVPNHATFCIVFKHYASAHLVEEAMNAYDRTEEFNFK 131
Query: 325 PDVVTCNCIIDALCFKKRIPEALEV-LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+ N +IDALC K + EA E+ +RE K+ +V Y+ +++ K+ + E
Sbjct: 132 DETRYSN-LIDALCEYKHVIEAEELFIRESKDLVFNDDVKIYDMILRGWFKMGXWKKCRE 190
Query: 384 YLDEMEQKNG--SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
+ +EM+ ++G S I + K +P + + M+ G ++ YN +++
Sbjct: 191 FWEEMDWRSGCKSLCSYSIYMDIQCKG-GRPWRAVKLYKEMKTXGIRLDVVAYNAVIRAI 249
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ D + EM++ G P+ +Y +I L + GR+ +A +MR K P
Sbjct: 250 GLSEGVDFSIRVYREMKELGCEPNVVTYDTIIKLLCEHGRIREAYGVLDQMREKDCAPNV 309
Query: 502 RT 503
T
Sbjct: 310 MT 311
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 224/440 (50%), Gaps = 12/440 (2%)
Query: 86 PGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
PG +++ + + + S + + AL+ +++ L+ V+ A FF+W
Sbjct: 109 PGLDVSEEAERVCRVLSTLPEPRVPAALDALGASVSPQLVAEVLKNLSNAGILALAFFRW 168
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHM 203
R+ + ++ F+ +++ LG+ ++F + + + M L+++ T+ +++ RYA A
Sbjct: 169 AERQQGFVYTADSFHNLIEALGKIKQFRLVWSLVEAMRCRGLLSKDTFRLIVRRYARARK 228
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK--NEFGYDIKTMN 261
V+EA+ F++ FG DLS + L+ L + K V+ A F+ K F D+KT
Sbjct: 229 VKEAVETFEKMAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYT 288
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ GW ++ K +++++ + +PD V Y +++ K GK A+++F+ M
Sbjct: 289 VLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETN 348
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P +I+ L ++R+ EAL+ K G V T N+++ C+ + +
Sbjct: 349 GCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHA 408
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
++ +DEM + PN T++ +L L +K EE V + M ++GC+ +TY +++
Sbjct: 409 FKMVDEMRKSGIG--PNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMV 466
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
++ + + D W +M++KG+ P ++ +I+GL + RLE+A +YF EM +G+
Sbjct: 467 GMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIR 526
Query: 499 PEPRTGILVNDMNIKLKERG 518
P G L +++ L E G
Sbjct: 527 P---PGQLFSNLKEALIEGG 543
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 137/311 (44%), Gaps = 49/311 (15%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
+++V+++ + + A+ FK + R G + P + +++ G + + L V+ EM
Sbjct: 254 LIDVLSKSK-QVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLD 312
Query: 183 ----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
PD+V YG+L++ + + +EAI VF + G + + L+ L +
Sbjct: 313 AGLQPDVV---AYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEER 369
Query: 239 VEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
++ A +FE S+ + F ++ T N ++ +C A + ++ KS P+S TY
Sbjct: 370 LDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDI 429
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPD------------------------------- 326
++ L K K+ A +FQ M + G +P
Sbjct: 430 ILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKG 489
Query: 327 VVTC----NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
V+ C + +I+ LCF+ R+ EA +EM +RG P +++L + L + R+
Sbjct: 490 VLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQ 549
Query: 383 EY---LDEMEQ 390
E LDE+ +
Sbjct: 550 EMALKLDELRK 560
>gi|297745567|emb|CBI40732.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 186/403 (46%), Gaps = 12/403 (2%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
K IE AL + LT D++ VINR EA FF W ++ + +N I+
Sbjct: 75 KAAIELALTNVGIDLTIDIVSEVINRGNLGGEAMVIFFNWAVKQPTIPKDVDTYNVIIKA 134
Query: 166 LGRARRFVE-LIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
LGR R+F+E +++V +M P N +T I+++ + A V +AI +F +EFG
Sbjct: 135 LGR-RKFIEFVVKVLKDMHIQGISP---NYETLSIVMDSFIKARQVSKAIEMFRNLEEFG 190
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKR 278
D + LL LC+ HV A FF + K ++ T NII+ GW G + E +R
Sbjct: 191 GKCDTESLNVLLQCLCQRSHVGAANLFFNAMKGGIPFNCMTYNIIIGGWSKYGKIGEMER 250
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
K ++ P+ +T++ + L + G++ A+ +F M E G P+ N +I
Sbjct: 251 CLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFI 310
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
+ E L+ M + C PN+ TY LI K +++ E LDEM +
Sbjct: 311 STRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTG 370
Query: 399 EIT-FNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
IT F L P + ++ + GC++S Y ++L + + + W+EM
Sbjct: 371 AITSFIEPLCQYGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEM 430
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++ G D Y +I+GL + G+L+ A+ E KG P
Sbjct: 431 QESGYSSDTEVYEYVINGLCNIGQLDTAVLVMEESLHKGFCPS 473
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 95/236 (40%), Gaps = 4/236 (1%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAI 208
+SP F+ +++ LGRA R + ++VF M + + N Y L++ + + +E +
Sbjct: 260 FSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECL 319
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGW 267
++ ++ + L++ + + V A E E + +
Sbjct: 320 KYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPL 379
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G + A +K K C Y + L++ GK G L L+ M E G D
Sbjct: 380 CQYGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDT 439
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+I+ LC ++ A+ V+ E ++G P+ + L L ++E Y+
Sbjct: 440 EVYEYVINGLCNIGQLDTAVLVMEESLHKGFCPSRLIRSKLNNKLLASNKVEMAYK 495
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 211/438 (48%), Gaps = 14/438 (3%)
Query: 76 SDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFD 135
S E++EF E I+ + + + ++ I A++ C + ++ ++ ++ R+ D
Sbjct: 86 SHEEAEF------EADIDEVSRILSSHFASPEAIVIAMDCCPVRVSGRMVDKILRRFGSD 139
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV---ELIQVFDEMPDLVNEKTYG 192
W AA+ FF W + Y ++++N ++D+LG+ ++F LI+ DE+ LV+ T
Sbjct: 140 WVAAFGFFMWAGAQEGYCHHADLYNLMVDILGKFKQFDLLWGLIRQMDEIGCLVSLATMT 199
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
++ R A A+ +AI F++ +FG + D A LL LC+ K V+ A F+ +
Sbjct: 200 KVMRRLAGANRWTDAIDAFNKMDQFGVVRDTKAMNALLDTLCKEKSVKRARGVFQELRGV 259
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D + N +++GWC + EA+ K++ + P +TY + + A + T
Sbjct: 260 VPPDESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVY 319
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ M KG +P+V+T ++ AL R EAL+V ++K GC+P+ + YNS+I L
Sbjct: 320 AILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYIL 379
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
+ R+E DEM + P FN ++ + + E +L +ME CK
Sbjct: 380 GRAGRLEDANSVFDEMCRTGIP--PTVAIFNTMISAACDHSQAENALKILVKMEEQSCKP 437
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TY +LKL + M +K + PD +Y +++ L G+ + +
Sbjct: 438 DIKTYTPLLKLCCKRQWMKILPFLICHMFRKDISPDFSTYILLVTWLCRNGKPAQSCLFL 497
Query: 490 HEMRLKGMVPEPRTGILV 507
EM LKG +P+ T LV
Sbjct: 498 EEMVLKGFMPKQETFDLV 515
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 10/231 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E +SP + ++++ + F + + +EM P+++ TY I+++ A
Sbjct: 292 EHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVI---TYTIVMHALGKAG 348
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
+EA+ VFD+ K G + D S + +++ L R +E A + F E + + N
Sbjct: 349 RTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFN 408
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ C A + + + C+PD TY + K+ + L M+ K
Sbjct: 409 TMISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCKRQWMKILPFLICHMFRK 468
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
PD T ++ LC + ++ L EM +G +P T++ +++ L
Sbjct: 469 DISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQETFDLVMEKL 519
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 237/484 (48%), Gaps = 30/484 (6%)
Query: 69 LVHSLANSDEKSEFQRYP---GDEIAINVQNILKTCSV-----STKGEIEKALNQCELTL 120
++ SLAN E +F R G+ + V++I K C ++ ++ K L++C++ +
Sbjct: 71 VIPSLANWVESQKFSRQQVSEGNVVKKPVEDIDKVCDFLNKKDTSHEDVVKELSKCDVVV 130
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
T+ L++ V+ R+ W AY FF W + + Y + +NA++DVLG+ R F + ++ +
Sbjct: 131 TESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVN 190
Query: 181 EM-----PDLVNEKTYGILLNRYAAAHMVEEAIGVF-DRRKEFGELDDLSAFQNLLLWLC 234
EM LV T ++ R A + +A+ F + K +G D A +L+ L
Sbjct: 191 EMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALV 250
Query: 235 RYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK-SKCEPDSV 293
+ +E A F + D +T NI+++G+C ++ R D++K ++ PD V
Sbjct: 251 KENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCK-ARKFDDARAMMDLMKVTEFTPDVV 309
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY +FV A K+G + + M E G P+VVT ++ +L K++ EAL V +M
Sbjct: 310 TYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKM 369
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---K 410
K GC+P+ Y+SLI L K R + E ++M N + + +N ++ +
Sbjct: 370 KEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM--TNQGVRRDVLVYNTMISAALHHS 427
Query: 411 KPEEVPWVLERMER---NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+ E +L+RME C + +TY +LK+ + + M K + D
Sbjct: 428 RDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVS 487
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVIK 526
+Y ++I GL G++E+A +F E KGMVP T +LV+++ E+ + +K
Sbjct: 488 TYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDEL-----EKKNMAEAKLK 542
Query: 527 LTSL 530
+ SL
Sbjct: 543 IQSL 546
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 219/430 (50%), Gaps = 10/430 (2%)
Query: 104 STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAIL 163
S++ + KALN+ + T++L+ ++ R+ A+ F W + Y +++ ++
Sbjct: 70 SSEAAVVKALNESGIDATNELVSQILMRFDSHCVVAFGVFIWAKNQTSYVHTPELYDYMI 129
Query: 164 DVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
D+LG+ ++F + + ++M L V+ T ++ R A A ++AI VF +++G
Sbjct: 130 DILGKFKKFSLMWSLVEQMKGLNGYVSLATASKVMRRLAKARKYKDAIDVFRGIEKYGAS 189
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D A L+ L + VE A + F K+ D + NI+++G+C A++
Sbjct: 190 KDREALNVLMDALVKEGDVEDAHSAFLEFKDCITLDSSSFNILIHGYCKARMFVVARKIM 249
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+++ K PD V+Y+ F+ A ++ +F M EKG KP+V+T ++ AL
Sbjct: 250 EEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITYTTVMHALGKA 309
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
+++ EALEV +MK GCLP+ Y+SLI L + R++ ++ ++ME K G C N
Sbjct: 310 RQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDME-KQGVC-RNLW 367
Query: 401 TFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
+N ++ S + +LERME + CK TY +LK+ ++ M
Sbjct: 368 VYNTMISSACAHSQGGSALKLLERMEGDSCKPDVKTYAPLLKMCCRRKSIKLLKFLLSHM 427
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIK-LK 515
K + D +YT++++ G+LE A YF E LKGMVP +T LV ++ K +K
Sbjct: 428 FKNNVSVDLGTYTLLVNEFCRNGKLEHACFYFQEAVLKGMVPMVKTFKALVEELEQKNMK 487
Query: 516 ERGEQGKKVI 525
E E+ +K++
Sbjct: 488 EMKEKIEKLM 497
>gi|242071011|ref|XP_002450782.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
gi|241936625|gb|EES09770.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
Length = 528
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 190/381 (49%), Gaps = 26/381 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVF-DEMPD-LVNEKTYGILLNRYAAAHMVEEAIGVF 211
P + ++A++D L RAR+F +V D D + +++ +L RY AA M +A+ F
Sbjct: 118 PPPDAYDAVVDALARARQFDAAWRVVVDASADGAASPRSFAVLARRYVAAGMTRQAVRAF 177
Query: 212 DRRKEF-GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
D + F G + + F LL LC+YK+ +VA F K ++ + K I++ GWC +
Sbjct: 178 DDMEAFVGREANSAEFATLLDTLCKYKYPKVATEIFNKRKYKYNPNEKMYTILIYGWCKV 237
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR----------LFQAMWE 320
A++F KD++ EP+ VTY +N + + L R + + M +
Sbjct: 238 NRNDMARKFLKDMLDHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHSAEDVLKEMRD 297
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G +PDV + + I+ + + + R MK+RG P V TY S+IK L R+E
Sbjct: 298 RGIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTSVIKCLASCGRLED 357
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTD--TYN 435
LDEM + G C P+ T+N K + +V L+ +M++ G + D TYN
Sbjct: 358 AETLLDEMVAE-GVC-PSPATYNCFFKEYRGRNDVSGALQLYNKMKQPGSLTAPDIHTYN 415
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++L +++ + V+ W +M + +GPD SYT++IHG + +A +F EM K
Sbjct: 416 ILLGMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREACQFFMEMIEK 475
Query: 496 GMVPEPRT------GILVNDM 510
G +P+ T G++ DM
Sbjct: 476 GFLPQKITFETLYRGLIQADM 496
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 6/201 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+ +Y I+L+ Y+ AH E + +F K+ G ++ + +++ L +E A
Sbjct: 302 PDVT---SYSIILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDA 358
Query: 243 ETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFV 299
ET + E T N + +V A + + + + S PD TY +
Sbjct: 359 ETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQPGSLTAPDIHTYNILL 418
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
K + G+ ++ M E PD+ + +I C ++ EA + EM +G L
Sbjct: 419 GMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREACQFFMEMIEKGFL 478
Query: 360 PNVTTYNSLIKHLCKIKRMET 380
P T+ +L + L + + T
Sbjct: 479 PQKITFETLYRGLIQADMLRT 499
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 80/177 (45%), Gaps = 6/177 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + +++ L R + + DEM + TY Y + V A+ +
Sbjct: 337 PTVATYTSVIKCLASCGRLEDAETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQL 396
Query: 211 FDRRKEFGEL--DDLSAFQNLL-LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
+++ K+ G L D+ + LL +++ +H V + + + ++ G D+ + ++++G+
Sbjct: 397 YNKMKQPGSLTAPDIHTYNILLGMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGF 456
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C EA +F+ ++I+ P +T+ T L + L T RL + + E+ K
Sbjct: 457 CASQKWREACQFFMEMIEKGFLPQKITFETLYRGLIQADMLRTWRRLKRRVDEEAAK 513
>gi|413938979|gb|AFW73530.1| ATP binding protein [Zea mays]
Length = 551
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 199/410 (48%), Gaps = 17/410 (4%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
++KT + S +G E AL+ LT L+ +V++R R++ + A+ FF W S++ YS
Sbjct: 84 VIKTGTESNEG-TEAALDALGAELTTPLVADVLHRLRYEEKLAFRFFAWASQQDGYSHEP 142
Query: 157 NVFNAILDVLG----RARRFVELIQVFDEMPDLVNEKTY--GIL--LNRYAAAHMVEEAI 208
+N I+D+L ++R+F L V D M + G+L L Y H+
Sbjct: 143 TTYNDIIDILSGTRYKSRQFGVLCNVLDHMKRHGSRSVPVEGLLEILRAYTEKHLTHMRK 202
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
RR + A LL C+ V+ AE F K + + +T + + GWC
Sbjct: 203 LAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWC 262
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG---RKP 325
+ +A + +++I+ K P+S TY + + G + A LF+ M +G P
Sbjct: 263 RARDPKKAMKVLEEMIQMKHTPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSP 322
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
T + +I AL R+ E E+L +M+ GC+P+VTTY LI+ +C + R++ Y L
Sbjct: 323 TAKTYSIMIVALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRLDAAYRVL 382
Query: 386 DEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
DEM + P+ +T+N L SL+ ++ + ERM C+ S TYN+++ ++
Sbjct: 383 DEMGRAGFP--PDIVTYNCFLNVLCSLRNADDALELCERMIEAHCEPSVHTYNMLMMMFF 440
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ W EM+K+G +Y +MI+GL+D G E A + E+
Sbjct: 441 EMGEAHRALDIWLEMDKRGCQRAIDTYEIMIYGLFDCGETEYATALLDEV 490
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 106/246 (43%), Gaps = 7/246 (2%)
Query: 152 YSPGSNVFNAILD------VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVE 205
++P S + A ++ ++ AR E ++ KTY I++ A A +E
Sbjct: 282 HTPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRME 341
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
E + + G + D++ +++L+ +C ++ A E + F DI T N L
Sbjct: 342 ECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFL 401
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N C L N +A + +I++ CEP TY + + G+ AL ++ M ++G +
Sbjct: 402 NVLCSLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQ 461
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
+ T +I L A +L E+ NR + +++++ L + + ++
Sbjct: 462 RAIDTYEIMIYGLFDCGETEYATALLDEVINRDMKLSYKKFDAIMLRLSAVGNLGAIHRL 521
Query: 385 LDEMEQ 390
+ M +
Sbjct: 522 SEHMRK 527
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 9/182 (4%)
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+ N ++DA C + EA V +K R L N TY++L C+ + + +
Sbjct: 215 PETDALNVLLDAFCKCGMVKEAEAVFGRVK-RKLLGNAETYSTLFFGWCRARDPKKAMKV 273
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT---YNVIL 438
L+EM Q + P T+ ++S E + E M G +S+ T Y++++
Sbjct: 274 LEEMIQMKHT--PESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMI 331
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D ++ +M G PD +Y +I G+ GRL+ A EM G
Sbjct: 332 VALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFP 391
Query: 499 PE 500
P+
Sbjct: 392 PD 393
>gi|147865347|emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
Length = 561
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 183/403 (45%), Gaps = 12/403 (2%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
K IE AL + LT D++ V NR EA FF W ++ + +N I+
Sbjct: 116 KAAIELALTNVGIDLTIDIVSEVXNRGNLGGEAMVXFFNWAVKQPTIPKDVDTYNVIIKA 175
Query: 166 LGRARRFVEL-IQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
LGR R+F+E + V +M P N +T I+++ + A V +AI +F +EFG
Sbjct: 176 LGR-RKFIEFXVXVLKDMHIQGISP---NYETLSIVMDSFIKARQVSKAIEMFRNLEEFG 231
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKR 278
D + LL LC+ HV A FF + K ++ T NII+ GW G + E +R
Sbjct: 232 GKCDTESLNVLLQCLCQRSHVGAANLFFNAMKGGIPFNCMTYNIIIGGWSKYGKIGEMER 291
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
K ++ P+ +T++ + L + G++ A+ +F M E G P+ N +I
Sbjct: 292 CLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFI 351
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
+ E L+ M + C PN+ TY LI K +++ E LDEM +
Sbjct: 352 STRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTG 411
Query: 399 EIT-FNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
IT F L P + ++ + GC++S Y ++L + + + W+EM
Sbjct: 412 AITSFIEPLCQYGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEM 471
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++ G D Y +I+GL + G+L+ A+ E KG P
Sbjct: 472 QESGYSSDTEVYEYVINGLCNIGQLDTAVLVMEESLXKGFCPS 514
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 94/236 (39%), Gaps = 4/236 (1%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAI 208
+SP F+ +++ LGRA R + ++VF M + + N Y L++ + + +E +
Sbjct: 301 FSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECL 360
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGW 267
++ ++ + L++ + + V A E E + +
Sbjct: 361 KYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPL 420
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G + A +K K C Y + L++ GK G L L+ M E G D
Sbjct: 421 CQYGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDT 480
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+I+ LC ++ A+ V+ E +G P+ + L L ++E Y+
Sbjct: 481 EVYEYVINGLCNIGQLDTAVLVMEESLXKGFCPSRLIRSKLNNKLLASNKVEMAYK 536
>gi|334183891|ref|NP_177483.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806278|sp|Q9FX35.2|PP117_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g73400, mitochondrial; Flags: Precursor
gi|332197336|gb|AEE35457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 568
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 223/457 (48%), Gaps = 26/457 (5%)
Query: 59 LFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCEL 118
L + RIE SL +E R G A+ + + +++ ++EKAL++ +
Sbjct: 64 LEITRIEKVSEDQSLVYCNEND--IRTKGSNHAVGILHEAIMANLNAYDDMEKALDESSV 121
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG----RARRFVE 174
LT ++ ++ R +++ + A+ FF W + YS +N ++D+L + ++F
Sbjct: 122 DLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRI 181
Query: 175 LIQVFDEMPDLVNEKTYGI------LLNRYAAAHMVEEAIGVFDRRKEF--GELDDLSAF 226
+I + D M N KT + +L +Y ++ + F +RK +++AF
Sbjct: 182 VIDMLDYMKR--NNKTVVLVDVLLEILRKYCERYLTH--VQKFAKRKRIRVKTQPEINAF 237
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
LL LC+ V+ E ++ D T N++ GWC + + +A + +++I++
Sbjct: 238 NMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEA 297
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK---PDVVTCNCIIDALCFKKRI 343
+P++ TY ++ + G + A LF M KG P T +I AL +
Sbjct: 298 GHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKA 357
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
E E++ M + GCLP+V+TY +I+ +C ++++ Y++LDEM K P+ +T+N
Sbjct: 358 EECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP--PDIVTYN 415
Query: 404 YLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
L+ L +K +E + RM + C S TYN+++ ++ D D +TW EM+K+
Sbjct: 416 CFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKR 475
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
D +Y MI+GL+D R ++A E+ KG+
Sbjct: 476 DCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 512
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 120/291 (41%), Gaps = 39/291 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIGV 210
P +N FN + R R + +++ +EM + ++ TY ++ + A MV+EA +
Sbjct: 266 PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADL 325
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
FD G + L + + AE FE ++
Sbjct: 326 FDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFE---------------------LI 364
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G +I + C PD TY + + K+ A + M KG PD+VT
Sbjct: 365 GR----------MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTY 414
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
NC + LC ++ EAL++ M C P+V TYN LI ++ + + EM++
Sbjct: 415 NCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDK 474
Query: 391 KNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
++ C+ + T+ ++ L + +E ++LE + G K+ ++ L
Sbjct: 475 RD--CVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
>gi|242063152|ref|XP_002452865.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
gi|241932696|gb|EES05841.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
Length = 551
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 200/416 (48%), Gaps = 29/416 (6%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
++KT + S +G E AL+ LT L+ +V++R R++ + A+ FF W S + YS S
Sbjct: 84 VIKTGAESNEG-TEAALDALGTELTTPLVADVLHRLRYEEKLAFRFFAWASHQDGYSHES 142
Query: 157 NVFNAILDVLG----RARRFVELIQVFDEMPDLVNEKTYGI----------LLNRYAAAH 202
+N I+D+L ++R+F L V D M K +G +L Y H
Sbjct: 143 ATYNDIIDILSGTRYKSRQFGVLCNVLDHM------KRHGTRSVPVEDLLEILRAYTEKH 196
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI 262
+ RR + A LL C+ V+ AE F K + +T +I
Sbjct: 197 LTHMRKLAKKRRVRLRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRRLLGNAETYSI 256
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+ GWC + +A + +++I+ K P+S TY + + G + A LF+ M +G
Sbjct: 257 LFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYIAAIESFCSAGLVSEARELFEFMRTEG 316
Query: 323 R---KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
P T + +I AL R+ E E+L +M++ GC+P+V+TY LI+ +C + +++
Sbjct: 317 STISSPTAKTYSIMIVALAKADRMEECFELLSDMRSCGCMPDVSTYKELIEGMCLVGKLD 376
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNV 436
Y L+EM + P+ +T+N L SL+K ++ + ERM C+ S TYN+
Sbjct: 377 AAYRVLEEMGRAGFP--PDIVTYNCFLNVLCSLRKADDALELCERMIEAHCEPSVHTYNM 434
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
++ ++ + W EM+ +G +Y +MI GL+D G+ E A S E+
Sbjct: 435 LMVMFFEMGEAHRALDIWLEMDTRGCQRAIDTYEIMIDGLFDCGKTEHATSLLDEV 490
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 105/246 (42%), Gaps = 7/246 (2%)
Query: 152 YSPGSNVFNAILD------VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVE 205
++P S + A ++ ++ AR E ++ KTY I++ A A +E
Sbjct: 282 HTPESFTYIAAIESFCSAGLVSEARELFEFMRTEGSTISSPTAKTYSIMIVALAKADRME 341
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIIL 264
E + + G + D+S ++ L+ +C ++ A E + F DI T N L
Sbjct: 342 ECFELLSDMRSCGCMPDVSTYKELIEGMCLVGKLDAAYRVLEEMGRAGFPPDIVTYNCFL 401
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N C L +A + +I++ CEP TY + + G+ AL ++ M +G +
Sbjct: 402 NVLCSLRKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMGEAHRALDIWLEMDTRGCQ 461
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
+ T +ID L + A +L E+ NR + +++++ L + + ++
Sbjct: 462 RAIDTYEIMIDGLFDCGKTEHATSLLDEVINRDMKLSYKKFDAIMLRLSAVGDLGAIHRL 521
Query: 385 LDEMEQ 390
+ M +
Sbjct: 522 SEHMRR 527
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 9/182 (4%)
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+ N ++DA C + EA V +K R L N TY+ L C+ + + +
Sbjct: 215 PETDALNVLLDAFCKCGMVKEAEAVFGRVKRR-LLGNAETYSILFFGWCRARDPKKAMKV 273
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT---YNVIL 438
L+EM Q + P T+ ++S E + E M G +S+ T Y++++
Sbjct: 274 LEEMIQMKHT--PESFTYIAAIESFCSAGLVSEARELFEFMRTEGSTISSPTAKTYSIMI 331
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D ++ +M G PD +Y +I G+ G+L+ A EM G
Sbjct: 332 VALAKADRMEECFELLSDMRSCGCMPDVSTYKELIEGMCLVGKLDAAYRVLEEMGRAGFP 391
Query: 499 PE 500
P+
Sbjct: 392 PD 393
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 176/367 (47%), Gaps = 9/367 (2%)
Query: 141 TFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNR 197
FF+W + Y+ G+ +N +L+VL ++ R + +++M + N TYG LL
Sbjct: 2 AFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRS 61
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYD 256
A EEA VF G ++ ++ L+ LCR + V E AE E +
Sbjct: 62 LCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPN 121
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ T +L+G C +G + EA + ++ C PD V Y ++ +KKG +G A RLF+
Sbjct: 122 VVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFE 181
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M EKG P V T N ++ K + ++M +GC+PN+ T+N+L+ CK+
Sbjct: 182 EMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMG 241
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDT 433
M + EM ++ C P+ +++N L++ + KP E +L M R+G +
Sbjct: 242 DMVEAHRLFLEM--RSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
YN+++ Y D + E+ K G+ PD SY+ +I L G++ A F +M
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359
Query: 494 LKGMVPE 500
G P+
Sbjct: 360 ANGSAPD 366
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 148/300 (49%), Gaps = 10/300 (3%)
Query: 122 DDLIVNV-INRY--RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
D ++ NV I+ + + D AY F+ + +G P +N++L R F + +
Sbjct: 156 DGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI-PTVFTYNSLLSGFSRKGEFGRVQSL 214
Query: 179 FDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC- 234
F +M + N T+ LL+ + + EA +F + G D+ ++ L+ +C
Sbjct: 215 FKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCS 274
Query: 235 RYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ K E E ++ G DI + NI+++G+ G + A + + +I KS EPD+ +
Sbjct: 275 KGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFS 334
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y+T ++ L + GK+G A +F+ M G PD ++ LC +R+ E+ E+ + M
Sbjct: 335 YSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
C+P + YN L+ LCK KR + V E E+ ++ S P+ +L++L++ ++
Sbjct: 395 KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFS--PDVEISKVILETLRRSDD 452
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 152/338 (44%), Gaps = 15/338 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
+G + P + ++L L + + E + +F M PD V Y +L++ ++
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGV---VYNVLIDGFSKKG 171
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMN 261
+ EA +F+ E G + + + +LL R ++ F+ + +I T N
Sbjct: 172 DMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFN 231
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+L+G+C +G++ EA R + ++ C PD V+Y T + + KGK A RL + M
Sbjct: 232 NLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRS 291
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G PD+V+ N +ID + A+++ E+ G P+ +Y+++I LC+ ++
Sbjct: 292 GVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAA 351
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVIL 438
+ +M NGS P+ L+ L + E E + + M + C YN+++
Sbjct: 352 FVVFKDM-IANGSA-PDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
D V + E+ ++G PD V++ L
Sbjct: 410 YKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 5/243 (2%)
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+++Y + L K G+ + M G P+ T ++ +LC +R EA V R
Sbjct: 17 TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-- 409
M +GC PNV +Y+ LI LC+ ++++ E L+EM +G PN +T+ LL L
Sbjct: 77 GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEM--IDGGHQPNVVTYGSLLSGLCK 134
Query: 410 -KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
K +E + RM GC YNV++ + + +EEM +KG P +
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLT 528
Y ++ G KG S F +M +G VP T + D K+ + E + +++
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR 254
Query: 529 SLG 531
SLG
Sbjct: 255 SLG 257
>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 193/378 (51%), Gaps = 28/378 (7%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPDLVNEK----TYGILLNRYAAAHMVEEAIGVFDR 213
+N ++D+L + R+F Q+ EM D N K T+ +L+ R AA + +AI FD
Sbjct: 142 TYNLMIDILAKVRQFDVCWQLIVEM-DQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDD 200
Query: 214 RKEF-GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGN 272
+ F E + + F LL LC+Y +V+V F K+ F ++K +++ GWC +G
Sbjct: 201 MESFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRKHRFSPNVKMYTVLIYGWCKIGR 260
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR----------LFQAMWEKG 322
+ A+RF K+ + E VTY +N + ++ L R LF M E+G
Sbjct: 261 IDMAERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMRERG 320
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+PDV + + ++ + L+ L+ MK +G P+V TY S++K LC R+E
Sbjct: 321 IEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIEDAE 380
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGC-KMSTDTYNVIL 438
E L EM + S +T+N K K E + ++M +G + +YN++L
Sbjct: 381 ELLGEMVRNGVS--RTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHSYNILL 438
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
++++ + D V WE+++ G+GPD SYT++IHGL +K + +A +F EM KG++
Sbjct: 439 RMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGLL 498
Query: 499 PEPRT------GILVNDM 510
P+ T G++ +DM
Sbjct: 499 PQKVTFETLYKGLIQSDM 516
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 94/229 (41%), Gaps = 12/229 (5%)
Query: 161 AILDVLGRARRFVELIQ-VFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
A L R R + L + +FDEM PD+ ++ I+L+ Y+ AH E +
Sbjct: 294 ASLHPESRFERTITLAENLFDEMRERGIEPDVT---SFSIVLHVYSRAHKPELTLDKLKL 350
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGN 272
KE G + + +++ LC +E AE E +N T N + +
Sbjct: 351 MKEKGICPSVVTYTSVVKCLCSCGRIEDAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKD 410
Query: 273 VYEAKRFWKDIIKSKCEPDSV-TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
A + +K + + + +Y + +L +++ + G PD+ +
Sbjct: 411 AESALKLYKKMREDGLGSLGLHSYNILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYT 470
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+I LC K++ EA + EM +G LP T+ +L K L + + T
Sbjct: 471 MLIHGLCEKEKWREACKFFVEMIEKGLLPQKVTFETLYKGLIQSDMLRT 519
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 99/265 (37%), Gaps = 55/265 (20%)
Query: 293 VTYATFVNALTK-----------------------------------KGKLGTALRLFQA 317
VTY ++ L K G A+R F
Sbjct: 141 VTYNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDD 200
Query: 318 MWEKGRKPDVVTCNC-IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M +P T C ++D LC + +E+ + K+R PNV Y LI CKI
Sbjct: 201 MESFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRKHRFS-PNVKMYTVLIYGWCKIG 259
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK-----PEE--------VPWVLERME 423
R++ +L E ++ +T+N LL + + PE + + M
Sbjct: 260 RIDMAERFLKETGERGIEA--TVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMR 317
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G + +++++L +Y + + M++KG+ P +YT ++ L GR+E
Sbjct: 318 ERGIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIE 377
Query: 484 DALSYFHEMRLKGMVPEPRTGILVN 508
DA EM G+ RT + N
Sbjct: 378 DAEELLGEMVRNGV---SRTAVTYN 399
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 203/418 (48%), Gaps = 10/418 (2%)
Query: 93 NVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDY 152
+ + I + S + ++ L + +L++ V+N+ A +FF+W ++ ++
Sbjct: 57 DAEAICRILSTTPASTVDACLAAVPAKPSPELVLEVLNKLSNAGVLALSFFRWAEKQSEF 116
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGV 210
+ F+A+++ LG+ R+F + + ++M L+ T+ ++ RYA A +EAI
Sbjct: 117 KHTTEAFHALIEALGKIRQFKMIWTLVNDMKQRKLLTSDTFSLVARRYARARKAKEAIKT 176
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCV 269
F++ + +G +S F L+ LC+ K VE A E F + K DIK+ I+L GW
Sbjct: 177 FEKMEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKLRLDPDIKSYTILLEGWSQ 236
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
N+ + +++ + D V Y +NA K K A+ L+ M +G +P
Sbjct: 237 QQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHV 296
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+I+ L KR+ EALE K G +P TYN+++ C RM+ Y + EM
Sbjct: 297 YCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEM- 355
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN--GCKMSTDTYNVILKLYVNW 444
K PN TF+ +L L ++ EE V RM GC+ S TY ++++++ N
Sbjct: 356 -KKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNE 414
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ D W+EM+ KG+ P ++ ++ L + +L++A YF EM G+ P +
Sbjct: 415 ELLDMAVAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAK 472
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA++ +M++ G P+V+ +N L+ LCK K +E +E D+M + P+ ++
Sbjct: 172 EAIKTFEKMEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKLRLD--PDIKSYTI 229
Query: 405 LLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
LL+ + + +V V ME G ++ Y +I+ + D+ + EM+ +G
Sbjct: 230 LLEGWSQQQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARG 289
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ P Y +I+GL RL++AL +F + G VPE T
Sbjct: 290 VRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPT 331
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 127/292 (43%), Gaps = 11/292 (3%)
Query: 241 VAETFFE--SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI--IKSKCEPDSVTYA 296
+A +FF +++EF + + + ++ LG + + K W + +K + S T++
Sbjct: 102 LALSFFRWAEKQSEFKHTTEAFHALIEA---LGKIRQFKMIWTLVNDMKQRKLLTSDTFS 158
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+ K A++ F+ M G KP V N ++D LC K + EA EV +M+
Sbjct: 159 LVARRYARARKAKEAIKTFEKMEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKL 218
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS--CLPNEITFNYLLKSLKKPEE 414
P++ +Y L++ + + + V E EME K + I N K+ KK +E
Sbjct: 219 RLDPDIKSYTILLEGWSQQQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKA-KKFDE 277
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+ M+ G + S Y ++ + D+ +E + G P+ +Y ++
Sbjct: 278 AIGLYHEMKARGVRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVG 337
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK 526
R++DA EM+ G+ P RT +V IK + R E+ V +
Sbjct: 338 AYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDIVLHHLIKGR-RIEEASSVFR 388
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 176/367 (47%), Gaps = 9/367 (2%)
Query: 141 TFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNR 197
FF+W + Y+ G+ +N +L+VL ++ R + +++M + N TYG LL
Sbjct: 2 AFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRS 61
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYD 256
A EEA VF G ++ ++ L+ LCR + V E AE E +
Sbjct: 62 LCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPN 121
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ T +L+G C +G + EA + ++ C PD V Y ++ +KKG +G A RLF+
Sbjct: 122 VVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFE 181
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M EKG P V T N ++ K + ++M +GC+PN+ T+N+L+ CK+
Sbjct: 182 EMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMG 241
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDT 433
M + EM ++ C P+ +++N L++ + KP E +L M R+G +
Sbjct: 242 DMVEAHRLFLEM--RSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
YN+++ Y D + E+ K G+ PD SY+ +I L G++ A F +M
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359
Query: 494 LKGMVPE 500
G P+
Sbjct: 360 ANGSAPD 366
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 148/300 (49%), Gaps = 10/300 (3%)
Query: 122 DDLIVNV-INRY--RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
D ++ NV I+ + + D AY F+ + +G P +N++L R F + +
Sbjct: 156 DGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI-PTVFTYNSLLSGFSRKGEFGRVQSL 214
Query: 179 FDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC- 234
F +M + N T+ LL+ + + EA +F + G D+ ++ L+ +C
Sbjct: 215 FKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCS 274
Query: 235 RYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ K E E ++ G DI + NI+++G+ G + A + + +I KS EPD+ +
Sbjct: 275 KGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFS 334
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y+T ++ L + GK+G A +F+ M G PD ++ LC +R+ E+ E+ + M
Sbjct: 335 YSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
C+P + YN L+ LCK KR + V E E+ ++ S P+ +L++L++ ++
Sbjct: 395 KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFS--PDVEISKVILETLRRSDD 452
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 152/338 (44%), Gaps = 15/338 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
+G + P + ++L L + + E + +F M PD V Y +L++ ++
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGV---VYNVLIDGFSKKG 171
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMN 261
+ EA +F+ E G + + + +LL R ++ F+ + +I T N
Sbjct: 172 DMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFN 231
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+L+G+C +G++ EA R + ++ C PD V+Y T + + KGK A RL + M
Sbjct: 232 NLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRS 291
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G PD+V+ N +ID + A+++ E+ G P+ +Y+++I LC+ ++
Sbjct: 292 GVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAA 351
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVIL 438
+ +M NGS P+ L+ L + E E + + M + C YN+++
Sbjct: 352 FVVFKDM-IANGSA-PDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
D V + E+ ++G PD V++ L
Sbjct: 410 YKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 5/243 (2%)
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+++Y + L K G+ + M G P+ T ++ +LC +R EA V R
Sbjct: 17 TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-- 409
M +GC PNV +Y+ LI LC+ ++++ E L+EM +G PN +T+ LL L
Sbjct: 77 GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEM--IDGGHQPNVVTYGSLLSGLCK 134
Query: 410 -KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
K +E + RM GC YNV++ + + +EEM +KG P +
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLT 528
Y ++ G KG S F +M +G VP T + D K+ + E + +++
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR 254
Query: 529 SLG 531
SLG
Sbjct: 255 SLG 257
>gi|297795031|ref|XP_002865400.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311235|gb|EFH41659.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 187/403 (46%), Gaps = 14/403 (3%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
K I+ L+ + L+ D++ +V+NR EA TFF W RE S + + IL
Sbjct: 96 KSAIQNCLSSLGIDLSIDIVSDVLNRGNLSGEAMVTFFNWAIREPGVSKDVDSYCVILRA 155
Query: 166 LGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGE 219
LGR + F ++ V M PDL + I ++ + AH V AI +F+ + +G
Sbjct: 156 LGRRKFFSFMMDVLRGMVCEGVNPDL---RCLTIAMDSFVRAHYVRRAIELFEESESYGV 212
Query: 220 LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
+F LL LC HV A + F ++K + +D + NI+++GW LG + ++
Sbjct: 213 KCSTESFNALLRCLCERSHVSAANSVFNAKKGKIPFDSCSYNIMISGWSKLGEIEGMEKV 272
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K++++ PD ++Y+ + L + G++ ++ +F M KG D N +I
Sbjct: 273 LKEMVEGGFVPDCLSYSHLIEGLGRAGRINDSVEIFDNMKHKGSVLDANVYNAMICNFIS 332
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ E++ R M + C PN+ TY+ L+ L K +++ E +EM + LP
Sbjct: 333 ARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRG--ILPTT 390
Query: 400 ITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
LK L P + ++ + GC++S Y ++LK + + + W+E
Sbjct: 391 GLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDE 450
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
M++ G D Y ++ GL G LE+A+ E KG P
Sbjct: 451 MQECGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCP 493
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 8/226 (3%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGILLNRYAAAHMVE 205
EG + P ++ +++ LGRA R + +++FD M +++ Y ++ + +A +
Sbjct: 278 EGGFVPDCLSYSHLIEGLGRAGRINDSVEIFDNMKHKGSVLDANVYNAMICNFISARDFD 337
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNII-- 263
E++ + R + +L + L+ L + + V A FE E G + T ++
Sbjct: 338 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFE-EMLSRGI-LPTTGLVTS 395
Query: 264 -LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
L C G + A ++ K+ C Y + L++ GK G L ++ M E G
Sbjct: 396 FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQECG 455
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
DV I+D LC + A+ V+ E +G PN Y+ L
Sbjct: 456 YPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRL 501
>gi|255543335|ref|XP_002512730.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547741|gb|EEF49233.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 552
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 195/384 (50%), Gaps = 8/384 (2%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM 182
+L+ +VI R DW+ A+ FKW + G S I+ +LG R+F V +M
Sbjct: 124 NLVYSVIWELRKDWKLAFLGFKWGEKWGCIDEKS--CELIVWILGNHRKFNNAWIVIRDM 181
Query: 183 PDLVN--EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
L ++T I+++RYAAA +AI VF+ ++F D AF +L+ LC + ++E
Sbjct: 182 HQLSMNIQQTMLIMIDRYAAADNPGKAIEVFNIMEKFKMAPDEEAFYSLMNALCNHGYIE 241
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
AE F K F + + N+ILNGWC + N+ EAKR W+++ K P++ +Y +
Sbjct: 242 EAEEFMVVNKKLFPLETEGFNVILNGWCSICVNLLEAKRVWREMSKCCITPNATSYTHMI 301
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ +K G L +LRL+ M ++G P + N +I L + EAL L +MK G
Sbjct: 302 SCFSKVGNLFDSLRLYDEMKKRGWLPGMEVYNSLIYVLTRENCFKEALRFLDKMKEVGLQ 361
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW-V 418
P+ TTYNS+I+ LC+ K++ L M ++N S P T++ LL+ E V
Sbjct: 362 PDSTTYNSMIRPLCEGKKLVEARSVLATMIEENIS--PTMETYHALLEVENSDFEATLEV 419
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L RM G + DT+ ++L + + + W EM++ + P+ Y +++ GL
Sbjct: 420 LNRMTVAGLAPTDDTFLLVLAKFFKLEQAENALKMWIEMKQYEVTPNLTHYKILVEGLVR 479
Query: 479 KGRLEDALSYFHEMRLKGMVPEPR 502
G L A + +MR G +P+
Sbjct: 480 CGLLAKARECYADMRSNGFTDDPK 503
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 94/247 (38%), Gaps = 36/247 (14%)
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
+TM I+++ + N +A + + K K PD + + +NAL G + A F
Sbjct: 190 QTMLIMIDRYAAADNPGKAIEVFNIMEKFKMAPDEEAFYSLMNALCNHGYIEEAEE-FMV 248
Query: 318 MWEKGRKPDVVTCNCIIDALC-FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
+ +K + N I++ C + EA V REM PN T+Y +I K+
Sbjct: 249 VNKKLFPLETEGFNVILNGWCSICVNLLEAKRVWREMSKCCITPNATSYTHMISCFSKVG 308
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNV 436
+ DEM+++ G + YN
Sbjct: 309 NLFDSLRLYDEMKKR----------------------------------GWLPGMEVYNS 334
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ + +C + ++M++ G+ PD +Y MI L + +L +A S M +
Sbjct: 335 LIYVLTRENCFKEALRFLDKMKEVGLQPDSTTYNSMIRPLCEGKKLVEARSVLATMIEEN 394
Query: 497 MVPEPRT 503
+ P T
Sbjct: 395 ISPTMET 401
>gi|218202055|gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indica Group]
Length = 586
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 191/420 (45%), Gaps = 8/420 (1%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
++ AL LT V+ R R + FF + +S + + + L
Sbjct: 81 DLPAALRGFAPWLTPGDAAAVLRRCRHLPLPSLRFFLFAGELPGFSHHPDSLLVLANSLA 140
Query: 168 RARRFVELIQVFDEMP-DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
AR F L + ++P ++ + +L Y+ A + E+AI F FG ++ F
Sbjct: 141 GARLFPLLRSLLSDLPPSALSRGLFPLLFRAYSRARLPEDAIRAFSSMAGFGFPPTIADF 200
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
+LL L R VE E FF +F K I+++GW V+ A+ + ++++
Sbjct: 201 HSLLFALSRNGLVEYGERFFRESSAQFDVSAKAYTILISGWAVVKKPENARSLFDEMVER 260
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK-GRKPDVVTCNCIIDALCFKKRIPE 345
E D Y ++AL + G + +A M + G P+ T + A C K +
Sbjct: 261 GVELDVHVYNALIDALCRGGDITSAQEQLSNMQKSHGLVPNAATYGPFLHAACASKDVRA 320
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
AL VL M PNV TYN++I+ LC + + Y LDE+ + P+ ++N L
Sbjct: 321 ALRVLDRMHTHALTPNVFTYNAVIRLLCDLGEINEAYNILDEITTQGEK--PDVWSYNTL 378
Query: 406 LKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
L + LK+ + ++ RM++ C +YN++LK+ + D W+ MEK+G
Sbjct: 379 LNAHCKLKEVNKALRLISRMDKELCPPDRHSYNMLLKMLIGVGRFDTAIEVWDGMEKRGF 438
Query: 463 GPDQRSYTVMIHGLYD-KGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQG 521
P +Y VMIHGL KGR EDA SYF M +G+ P T ++ D + L R + G
Sbjct: 439 HPGAATYAVMIHGLASKKGRAEDACSYFVRMVDEGIPPYQATCEVLRDRLLMLGLRDQLG 498
>gi|222641466|gb|EEE69598.1| hypothetical protein OsJ_29150 [Oryza sativa Japonica Group]
Length = 579
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 186/400 (46%), Gaps = 8/400 (2%)
Query: 128 VINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP-DLV 186
V+ R R + FF + +S + + + L AR F L + ++P +
Sbjct: 94 VLRRCRHLPLPSLRFFLFAGELPGFSHHPDSLLVLANSLAGARLFPLLRSLLSDLPPSAL 153
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
+ + +L Y+ A + E+AI F FG ++ F +LL L R VE E FF
Sbjct: 154 SRGLFPLLFRAYSRARLPEDAIRAFSSMAGFGFPPTIADFHSLLFALSRNGLVEYGERFF 213
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+F K I+++GW V+ A+ + +++K E D Y ++AL + G
Sbjct: 214 RESTAQFDVSAKAYTILISGWAVVKKPENARSLFDEMVKRGVELDVHVYNALIDALCRGG 273
Query: 307 KLGTALRLFQAMWEK-GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
+ +A M + G P+ T + A C K + AL VL M PNV TY
Sbjct: 274 DITSAQEQLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTY 333
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERM 422
N++I+ LC + + Y LDE+ + P+ ++N LL + LK+ + ++ RM
Sbjct: 334 NAVIRLLCDLGEINEAYNILDEITTQGEK--PDVWSYNTLLNAHCKLKEVNKALRLISRM 391
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD-KGR 481
++ C +YN++LK+ ++ D W+ MEK+G P +Y VMIHGL KGR
Sbjct: 392 DKELCPPDRHSYNMLLKMLISVGRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKKGR 451
Query: 482 LEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQG 521
EDA SYF M +G+ P T ++ D + L R + G
Sbjct: 452 AEDACSYFVRMVDEGIPPYQATCEVLRDRLLMLGLRDQLG 491
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 122/295 (41%), Gaps = 18/295 (6%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR-------ARRFVELI 176
L+ +R R +A F + P F+++L L R R F E
Sbjct: 160 LLFRAYSRARLPEDAIRAFSSMAGF--GFPPTIADFHSLLFALSRNGLVEYGERFFREST 217
Query: 177 QVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
FD V+ K Y IL++ +A E A +FD + G D+ + L+ LCR
Sbjct: 218 AQFD-----VSAKAYTILISGWAVVKKPENARSLFDEMVKRGVELDVHVYNALIDALCRG 272
Query: 237 KHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ A+ + + G + T L+ C +V A R + P+ T
Sbjct: 273 GDITSAQEQLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFT 332
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y + L G++ A + + +G KPDV + N +++A C K + +AL ++ M
Sbjct: 333 YNAVIRLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMD 392
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
C P+ +YN L+K L + R +T E D ME++ P T+ ++ L
Sbjct: 393 KELCPPDRHSYNMLLKMLISVGRFDTAIEVWDGMEKRGFH--PGAATYAVMIHGL 445
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 211/435 (48%), Gaps = 11/435 (2%)
Query: 94 VQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS 153
+ LK S+ + +AL+ +++ L++ V+ R+ DW AAY FF W ++ Y
Sbjct: 149 ISTFLKEQRHSSHDHVVQALDGSGFRVSNSLVMQVLKRFGNDWVAAYGFFIWAKKQTPYV 208
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
V+N ++D+LG+A+ F + ++ EM + V T ++ R+A A E+A+
Sbjct: 209 HSPEVYNLMVDILGKAKEFDLMWKLVKEMKRIEGYVCLDTMSKVMRRFAKAQRHEDAVEA 268
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
F ++G D +A LL L + + +E+A + K+ + NI++NGWC +
Sbjct: 269 FRGMGKYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKSSVPLSSPSFNILINGWCKV 328
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
N +A++ ++ + EPD TY F+ + + + M G P+ VT
Sbjct: 329 RNFEKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTY 388
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
++ ++ +ALE MK G +P+ Y+SL+ L K R++ E D+M +
Sbjct: 389 TILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPK 448
Query: 391 KNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ + + +T+N ++ + K E +L+ ME CK TY+ +LK+
Sbjct: 449 QG--VVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRM 506
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP-EPRTGIL 506
++ + M K + PD+ +YT+++ L + G+L +A ++F EM KG P E +L
Sbjct: 507 KVLKFLLDHMFKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETTVKLL 566
Query: 507 VNDMNIK--LKERGE 519
+ IK LKE+ +
Sbjct: 567 TRKLEIKSMLKEKDQ 581
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 197/398 (49%), Gaps = 8/398 (2%)
Query: 112 ALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARR 171
AL+ + L+ V+NR+ DW A FFKW Y ++N ++D+LG+ R
Sbjct: 117 ALDGLSFQPSSGLVSQVLNRFSNDWVPALGFFKWAKSLTGYRHSPELYNLMVDILGKCRS 176
Query: 172 FVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
F + ++ +EM L V +T ++ R A A E+AI F R ++FG D +A
Sbjct: 177 FDSMSELVEEMARLEGYVTLETMTKVMRRLARARKHEDAIEAFGRMEKFGVKKDTAALNV 236
Query: 229 LLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
L+ L + VE A K ++ N++++GWC + A++ +D+ +
Sbjct: 237 LIDALVKGDSVEHAHKVVLEFKGSIPLSSRSFNVLMHGWCRARDFDNARKAMEDMKEHGF 296
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
EPD +Y F+ A + ++ + M E G P+ VT ++ L ++ +ALE
Sbjct: 297 EPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQLRKALE 356
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
V +MK+ GC+ + Y+S+I L K R++ + ++M ++ + + +T+N ++ +
Sbjct: 357 VYEKMKSDGCVADTPFYSSMIFILGKAGRLKDACDVFEDMPKQG--VVRDVVTYNSMIST 414
Query: 409 L---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
+ E +L+ ME CK + TY+ +LK+ ++ + M K + PD
Sbjct: 415 ACAHSREETALRLLKEMEDGSCKPNVGTYHRLLKMCCKKKRMKVLKFLLDHMFKNNISPD 474
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+Y+++++ L G++EDA S+ EM L+G P+P T
Sbjct: 475 LATYSLLVNALRKSGKVEDAYSFLEEMVLRGFTPKPST 512
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
+E + P + ++ G R F ++ QV +EM + N TY ++ A +
Sbjct: 292 KEHGFEPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQL 351
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNII 263
+A+ V+++ K G + D + +++ L + ++ A FE K D+ T N +
Sbjct: 352 RKALEVYEKMKSDGCVADTPFYSSMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNSM 411
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ C A R K++ C+P+ TY + KK ++ L M++
Sbjct: 412 ISTACAHSREETALRLLKEMEDGSCKPNVGTYHRLLKMCCKKKRMKVLKFLLDHMFKNNI 471
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET--- 380
PD+ T + +++AL ++ +A L EM RG P +T L L +E
Sbjct: 472 SPDLATYSLLVNALRKSGKVEDAYSFLEEMVLRGFTPKPSTLKKLAGELESKSMLEEKVR 531
Query: 381 VYEYLDEMEQ 390
V E++D Q
Sbjct: 532 VEEWMDRFSQ 541
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 189/377 (50%), Gaps = 28/377 (7%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLVN----EKTYGILLNRYAAAHMVEEAIGVFDRR 214
+N ++D++ + +F Q+ EM D +N T+ IL+ R +A++ +A+ F+
Sbjct: 98 YNLLIDIVSKVHQFDLASQLIVEM-DQINLPPTPTTFFILIKRLISANLTRQAVRAFNEI 156
Query: 215 KEFGELDDLS-AFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
+ + + S F LL LC+Y +V+ A F N F D+K +++ GWC +G
Sbjct: 157 ESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRNSNRFVADVKMYTVLIYGWCKIGRF 216
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT----------ALRLFQAMWEKGR 323
A F ++ EP+ VTY +N + +K L A ++F M E G
Sbjct: 217 KTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEMRESGI 276
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+PDV + + ++ + L+ L MK +G PNV TY S+IK LC R+E +
Sbjct: 277 EPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAED 336
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNG-CKMSTDTYNVILK 439
+DEM + S P T+N K + ++ L+ +M+ +G C+ +T TY V++
Sbjct: 337 LIDEMVRNGVS--PCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYGVLIA 394
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+++ D V+ W +M + G+GPD SYTV+IHGL + + +A YF EM KG +P
Sbjct: 395 MFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEKGFLP 454
Query: 500 EPRT------GILVNDM 510
+ T G++ +DM
Sbjct: 455 QKVTFETLYRGLIQSDM 471
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 127/299 (42%), Gaps = 34/299 (11%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRA------RRFVELI----QVFDEM--- 182
++ A +F + +G P +N IL+ + R RF I +VFDEM
Sbjct: 216 FKTALSFLNEMKVKG-VEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEMRES 274
Query: 183 ---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV 239
PD+ ++ I+L+ Y+ AH + + KE G ++ + +++ LC +
Sbjct: 275 GIEPDVT---SFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRI 331
Query: 240 EVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYAT 297
E AE E +N T N + + +A +F+K + + CEP + TY
Sbjct: 332 EEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYGV 391
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+ K +G ++ M E G PD+ + +I LC K+ EA + EM +G
Sbjct: 392 LIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEKG 451
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF-----NYLLKSLKK 411
LP T+ +L + L + + T ++Q++ ITF NY LK K+
Sbjct: 452 FLPQKVTFETLYRGLIQSDMLRTWRRLKKRLDQES-------ITFGSEFQNYHLKPYKR 503
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 215/451 (47%), Gaps = 23/451 (5%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
+L ++S+ +E ALN+ + L+ + + + + +T F+W ++ +
Sbjct: 78 LLTDPALSSGAPLEDALNRTGIKPCSGLLQAIFSHFDASPKPLFTLFRWAMKQPGFESSM 137
Query: 157 NVFNAILDVLGRARRF-VELIQVFD-----EMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
+FN+++DVL ++R F + V D E P+LV+ T+ +L+ RYA A M AI
Sbjct: 138 TLFNSMIDVLAKSRAFDSAWLLVLDRIEGGEEPELVSSNTFAVLIRRYARAGMTLSAIRT 197
Query: 211 FDRRKEFGELDD----LSAFQNLLLWLCRYKHVEVAETFFESEKN---EFGYDIKTMNII 263
F+ + D S F+ LL LC+ HV VA +F+ ++ + I+ N++
Sbjct: 198 FEFAFSLDSIRDRDSEWSLFKILLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRVYNVL 257
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
LNGW + A++ W+ + + +P VTY T V + + A+ L M KG
Sbjct: 258 LNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGI 317
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+P+V+ N IID+L R EA+ ++ P ++TYNSL+K CK + +
Sbjct: 318 EPNVIVYNPIIDSLAEAGRFKEAMGMMERCLVSETGPTISTYNSLVKGFCKAGDLVGASK 377
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKL 440
L M + P T+NY + K EE + +M +G TY++++K+
Sbjct: 378 VLKMMISRGFD--PTLTTYNYFFRYFSRCGKTEEGMNLYTKMIESGHTPDRLTYHLLIKM 435
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ D +EM +G D + T+++H L RLE+A + F +M +G+VP+
Sbjct: 436 MCEEERLDLAVQVSKEMRARGCDLDLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGIVPQ 495
Query: 501 PRTGILVNDMNIKLKERG--EQGKKVIKLTS 529
T MN L++RG E +K+ + +
Sbjct: 496 YLT---FERMNNALRKRGLTEMARKLCDMMA 523
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 108/254 (42%), Gaps = 13/254 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +++ R RR + I++ EM P+++ Y +++ A A +EA
Sbjct: 284 PTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEPNVI---VYNPIIDSLAEAGRFKEA 340
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIILN 265
+G+ +R +S + +L+ C+ + A + + G+D + T N
Sbjct: 341 MGMMERCLVSETGPTISTYNSLVKGFCKAGDLVGASKVLKMMISR-GFDPTLTTYNYFFR 399
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+ G E + +I+S PD +TY + + ++ +L A+++ + M +G
Sbjct: 400 YFSRCGKTEEGMNLYTKMIESGHTPDRLTYHLLIKMMCEEERLDLAVQVSKEMRARGCDL 459
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T ++ LC R+ EA +M RG +P T+ + L K E +
Sbjct: 460 DLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGIVPQYLTFERMNNALRKRGLTEMARKLC 519
Query: 386 DEMEQ-KNGSCLPN 398
D M + S LPN
Sbjct: 520 DMMASVPHSSKLPN 533
>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 204/426 (47%), Gaps = 26/426 (6%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E +L + L+ L+ + R R + A +FF W + +S +N I+D+L +
Sbjct: 70 MESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDILAK 129
Query: 169 ARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGVFDRRKEFGELD-DLS 224
R+F Q EM E T + IL+ R +A + +A+ FD F E D D
Sbjct: 130 VRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCFVEKDADSD 189
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
F LL L +Y +V++A F K +F + K I++ GWC + V A+R +++
Sbjct: 190 DFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMV 249
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGT----------ALRLFQAMWEKGRKPDVVTCNCII 334
+ + VTY +N + + L A ++ M + G +PDV + + +I
Sbjct: 250 ERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQXGIEPDVTSYSIVI 309
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ L+ LR MK++G P V TY S++K LC R+E E + +M + S
Sbjct: 310 HVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVS 369
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVL----ERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
P+ T+N K + ++ L + E C TYN+++ ++V + + V
Sbjct: 370 --PSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIV 427
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT------G 504
+ W++M+ G GPD SYT++IHGL +K + ++A +F EM KG +P+ T G
Sbjct: 428 QEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRG 487
Query: 505 ILVNDM 510
++ +DM
Sbjct: 488 LIQSDM 493
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 11/212 (5%)
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+V DEM PD+ +Y I+++ Y+ AH E + K+ G ++ + +++
Sbjct: 288 KVLDEMRQXGIEPDVT---SYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVV 344
Query: 231 LWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS-KC 288
LC +E AE + K+ T N + + A R ++ + + C
Sbjct: 345 KCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSC 404
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
PD TY V K ++ ++ M G PD+ + +I LC K++ EA
Sbjct: 405 LPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACH 464
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
EM +G LP T+ +L + L + ++T
Sbjct: 465 FFVEMIEKGYLPQKITFETLYRGLIQSDMLKT 496
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 190/369 (51%), Gaps = 9/369 (2%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGS-NVFNAILDVLGRARRFVELIQVFDEMPDL---V 186
R+ + FF W + DY S + +N ++D+ G+ R+F + D M +
Sbjct: 125 RHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEI 184
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
+ +T+ IL+ RY A + EA+ F+R +++G + D AF ++ L R + A++FF
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF 244
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+S K+ F D+ ++ GWC G + EA++ +K++ + EP+ TY+ ++AL + G
Sbjct: 245 DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCG 304
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
++ A +F M + G P+ +T N ++ R + L+V +MK GC P+ TYN
Sbjct: 305 QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERME 423
LI+ C+ + +E + L+ M +K C N TFN + + ++K +V + +M
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKK--CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMM 422
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
C+ +T TYN++++++V D V +EM+ K + P+ +Y +++ G
Sbjct: 423 EAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWN 482
Query: 484 DALSYFHEM 492
+A F EM
Sbjct: 483 NAYKLFKEM 491
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 16/296 (5%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM- 182
++++ ++R R EA +FF S + + P V+ ++ RA E +VF EM
Sbjct: 226 IVISNLSRKRRASEAQ-SFFD--SLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282
Query: 183 -----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
P N TY I+++ + A VF + G + F NL+ +
Sbjct: 283 LAGIEP---NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG 339
Query: 238 HVE-VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
E V + + + +K D T N ++ C N+ A + +IK KCE ++ T+
Sbjct: 340 RTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFN 399
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
T + KK + A R++ M E +P+ VT N ++ K L++ +EM ++
Sbjct: 400 TIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDK 459
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL-PNEITFNYLLKSLKK 411
PNV TY L+ C + Y+ EM ++ CL P+ + +L L++
Sbjct: 460 EVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEK--CLTPSLSLYEMVLAQLRR 513
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 414 EVPW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
++ W +++ M+ ++S +T+ ++++ YV + H + ME G PD+ +++++
Sbjct: 168 DLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIV 227
Query: 473 IHGLYDKGRLEDALSYFHEMR 493
I L K R +A S+F ++
Sbjct: 228 ISNLSRKRRASEAQSFFDSLK 248
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 185/360 (51%), Gaps = 17/360 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
++P ++ +++ LGRA ++ ++V EM P+L TY L++ A +
Sbjct: 40 WTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLW---TYNTLVDCLGKAGQFD 96
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNII 263
EA+ + ++ G + D+ + L+ L + + A T F +E E G D T N +
Sbjct: 97 EALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLF-AEMRERGCVPDTFTYNSL 155
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G +G +A +++ + C PD +TY++ + L K G+ A +LFQ M +GR
Sbjct: 156 IYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGR 215
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
KPD +T ++DAL R+ +ALE+L EMK RG P V TYN+LI K+ + Y
Sbjct: 216 KPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYN 275
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
LDEM ++NG C P+ +T++ L+ L K +E VL++ME+ GC T TYN ++
Sbjct: 276 LLDEM-KRNG-CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLING 333
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ ++ M+ KG PD +Y+ +I L R+E A F EM G+ P+
Sbjct: 334 LGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPD 393
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 194/421 (46%), Gaps = 46/421 (10%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD 184
++N + R WEAA + +G P +N ++D LG+A +F E +++ EM D
Sbjct: 50 LINSLGRAG-KWEAALEVVAEMQAKG-CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRD 107
Query: 185 ---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+ + +TY L++ A + EA +F +E G + D + +L+ L + +
Sbjct: 108 NGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQK 167
Query: 242 A-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A E E E++ D+ T + ++ G G +A + ++++ + +PDS+T+ ++
Sbjct: 168 AMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMD 227
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
AL K G++ AL L M E+G KP VVT N +I + EA +L EMK GC P
Sbjct: 228 ALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKP 287
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPW 417
+V TY+ LI L K +++ + L +ME++ C P+ IT+N L+ L K +
Sbjct: 288 DVVTYSCLITGLIKASQLDEACQVLKKMEKEG--CPPDTITYNTLINGLGKAGLLNDAGR 345
Query: 418 VLERMERNGCKMSTDTYNVILKLY-----VNWDCE------------------------- 447
+ +RM+ GC TY+ ++ V C
Sbjct: 346 LFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLG 405
Query: 448 -----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
D + EM KG+ PD +Y ++ L GR ++A F +M+ G++P+
Sbjct: 406 KAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVA 465
Query: 503 T 503
T
Sbjct: 466 T 466
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 16/372 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+ F+ + R G P S F A++D LG+A R + +++ DEM P +V TY
Sbjct: 203 AFKLFQEMKRRG-RKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVV---TYN 258
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKN 251
L+ + + EA + D K G D+ + L+ L + + E + + EK
Sbjct: 259 ALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKE 318
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
D T N ++NG G + +A R + + C PD VTY+T + AL K ++ +A
Sbjct: 319 GCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESA 378
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
LF+ M G +PD+ T II L ++ +A + EM+ +G P+V TYN+ +
Sbjct: 379 CVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNS 438
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCK 428
L + R + + ++M K LP+ T++ LL L K +EV +L+ + GC
Sbjct: 439 LGRGGRFKEARKIFEDM--KESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCA 496
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+ ++ L++ +W D+ + KG+ P SY +I L GR+ +A +
Sbjct: 497 FDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNT 556
Query: 489 FHEMRLKGMVPE 500
+++ +G P+
Sbjct: 557 LEDLKEQGGKPD 568
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 137/248 (55%), Gaps = 7/248 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
++ T N +LN G EA+ ++++ +K PD V+Y+ +N+L + GK AL +
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M KG KP++ T N ++D L + EAL +L EM++ GC+P+V TYN LI L K
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTD 432
R+ + EM ++ C+P+ T+N L+ L K ++ +LE MER+GC
Sbjct: 128 GRLSEAFTLFAEMRERG--CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185
Query: 433 TYNVILKLYVNWDCED-KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TY+ ++ + D E K ++EM+++G PD ++T ++ L GR++DAL E
Sbjct: 186 TYSSLIT-GLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDE 244
Query: 492 MRLKGMVP 499
M+ +G+ P
Sbjct: 245 MKERGVKP 252
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 156/353 (44%), Gaps = 41/353 (11%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
N TY LLN A A EEA +F+ K D+ ++ L+ L R E A E
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E + ++ T N +++ G EA R ++ + C PD TY ++ L K
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G+L A LF M E+G PD T N +I L R +A+E+L EM+ GC P+V TY
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187
Query: 366 NSLI-----------------------------------KHLCKIKRMETVYEYLDEMEQ 390
+SLI L K R++ E LDEM++
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247
Query: 391 KNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ P +T+N L+ K E +L+ M+RNGCK TY+ ++ +
Sbjct: 248 RG--VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D+ ++MEK+G PD +Y +I+GL G L DA F M+ KG P+
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPD 358
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 110/217 (50%), Gaps = 5/217 (2%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P+ VTY + +NAL K G+ A LF+ + PDVV+ +C+I++L + ALEV
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+ EM+ +GC PN+ TYN+L+ L K + + L EM ++ C+P+ T+N L+ +L
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEM--RDNGCVPDVRTYNCLISTL 124
Query: 410 KKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K E + M GC T TYN ++ K EEME+ G PD
Sbjct: 125 GKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDV 184
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+Y+ +I GL G A F EM+ +G P+ T
Sbjct: 185 MTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSIT 221
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 134/311 (43%), Gaps = 48/311 (15%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM- 182
LI +I + D A K + +EG P + +N +++ LG+A + ++FD M
Sbjct: 295 LITGLIKASQLD--EACQVLKKMEKEG-CPPDTITYNTLINGLGKAGLLNDAGRLFDRMK 351
Query: 183 -----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
PD+V TY L+ A VE A +F+ + G DL + +++ L +
Sbjct: 352 SKGCNPDVV---TYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAG 408
Query: 238 HVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
V+ A+ F + + D+ T N LN G EA++ ++D+ +S PD TY
Sbjct: 409 QVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYD 468
Query: 297 TFVNALTKK-----------------------------------GKLGTALRLFQAMWEK 321
+ L+K G + A L Q K
Sbjct: 469 ALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSK 528
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P + N +IDAL R+ EA L ++K +G P++ +Y+SLI L + +++T
Sbjct: 529 GLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTA 588
Query: 382 YEYLDEMEQKN 392
+E L+EM ++
Sbjct: 589 FELLEEMSKRG 599
>gi|195655361|gb|ACG47148.1| ATP binding protein [Zea mays]
Length = 551
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 198/410 (48%), Gaps = 17/410 (4%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
++KT + S +G E AL+ LT L+ +V++R ++ + A+ FF W S++ YS
Sbjct: 84 VIKTGTESNEG-TEAALDALGAELTTPLVADVLHRLLYEEKLAFRFFAWASQQDGYSHEP 142
Query: 157 NVFNAILDVLG----RARRFVELIQVFDEMPDLVNEKTY--GIL--LNRYAAAHMVEEAI 208
+N I+D+L ++R+F L V D M + G+L L Y H+
Sbjct: 143 TTYNDIIDILSGTRYKSRQFGVLCNVLDHMKRHGSRSVPVEGLLEILRAYTEKHLTHMRK 202
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
RR + A LL C+ V+ AE F K + + +T + + GWC
Sbjct: 203 LAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWC 262
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG---RKP 325
+ +A + +++I+ K P+S TY + + G + A LF+ M +G P
Sbjct: 263 RARDPKKAMKVLEEMIQMKHTPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSP 322
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
T + +I AL R+ E E+L +M+ GC+P+VTTY LI+ +C + R++ Y L
Sbjct: 323 TAKTYSIMIVALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRLDAAYRVL 382
Query: 386 DEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
DEM + P+ +T+N L SL+ ++ + ERM C+ S TYN+++ ++
Sbjct: 383 DEMGRAGFP--PDIVTYNCFLNVLCSLRNADDALELCERMIEAHCEPSVHTYNMLMMMFF 440
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ W EM+K+G +Y +MI+GL+D G E A + E+
Sbjct: 441 EMGEAHRALDIWLEMDKRGCQRAIDTYEIMIYGLFDCGETEYATALLDEV 490
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 106/246 (43%), Gaps = 7/246 (2%)
Query: 152 YSPGSNVFNAILD------VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVE 205
++P S + A ++ ++ AR E ++ KTY I++ A A +E
Sbjct: 282 HTPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRME 341
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
E + + G + D++ +++L+ +C ++ A E + F DI T N L
Sbjct: 342 ECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFL 401
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N C L N +A + +I++ CEP TY + + G+ AL ++ M ++G +
Sbjct: 402 NVLCSLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQ 461
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
+ T +I L A +L E+ NR + +++++ L + + ++
Sbjct: 462 RAIDTYEIMIYGLFDCGETEYATALLDEVINRDMKLSYKKFDAIMLRLSAVGNLGAIHRL 521
Query: 385 LDEMEQ 390
+ M +
Sbjct: 522 SEHMRK 527
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 9/182 (4%)
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+ N ++DA C + EA V +K R L N TY++L C+ + + +
Sbjct: 215 PETDALNVLLDAFCKCGMVKEAEAVFGRVK-RKLLGNAETYSTLFFGWCRARDPKKAMKV 273
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT---YNVIL 438
L+EM Q + P T+ ++S E + E M G +S+ T Y++++
Sbjct: 274 LEEMIQMKHT--PESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMI 331
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D ++ +M G PD +Y +I G+ GRL+ A EM G
Sbjct: 332 VALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFP 391
Query: 499 PE 500
P+
Sbjct: 392 PD 393
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 189/369 (51%), Gaps = 9/369 (2%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGS-NVFNAILDVLGRARRFVELIQVFDEMPDL---V 186
R+ + FF W + DY S + +N ++D+ G+ R+F + D M +
Sbjct: 125 RHGIPLHQSLAFFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLAWHLIDLMKSRNVEI 184
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
+ +T+ IL+ RY A + EA+ F+R +++G + D AF ++ L R + A++FF
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFF 244
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+S K+ F D+ ++ GWC G + EA++ +KD+ + EP+ TY+ ++AL + G
Sbjct: 245 DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCG 304
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
++ A +F M + G P+ +T N ++ R + L+V +MK GC P+ TYN
Sbjct: 305 QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYN 364
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERME 423
LI+ C+ + +E + L+ M +K C N TFN + + ++K +V + +M
Sbjct: 365 FLIETHCRDENLENAVKVLNTMIKKK--CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMM 422
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
C+ +T TYN++++++ D V ++M+ K + P+ +Y +++ G
Sbjct: 423 EAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWN 482
Query: 484 DALSYFHEM 492
+A F EM
Sbjct: 483 NAYKLFKEM 491
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 129/296 (43%), Gaps = 16/296 (5%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM- 182
++++ ++R R EA +FF S + + P V+ ++ RA E +VF +M
Sbjct: 226 IVISNLSRKRRASEAQ-SFFD--SLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMK 282
Query: 183 -----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
P N TY I+++ + A VF + G + F NL+ +
Sbjct: 283 LAGIEP---NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG 339
Query: 238 HVE-VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
E V + + + +K D T N ++ C N+ A + +IK KCE ++ T+
Sbjct: 340 RPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFN 399
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
T + KK + A R++ M E +P+ VT N ++ K L++ ++M ++
Sbjct: 400 TIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDK 459
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL-PNEITFNYLLKSLKK 411
PNV TY L+ C + Y+ EM ++ CL P+ + +L L++
Sbjct: 460 EVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEK--CLTPSLSLYEMVLAQLRR 513
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 414 EVPW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
++ W +++ M+ ++S +T+ ++++ YV + H + ME G PDQ +++++
Sbjct: 168 DLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIV 227
Query: 473 IHGLYDKGRLEDALSYFHEMR 493
I L K R +A S+F ++
Sbjct: 228 ISNLSRKRRASEAQSFFDSLK 248
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 169/328 (51%), Gaps = 6/328 (1%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
+ ++ Y A++ +AI F + +FG + LL LC+ KHV+ A+ FF+
Sbjct: 126 FWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVN 185
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
E + KT +I++ GW +G+ EA++ ++++ + C D V Y + + AL K G +
Sbjct: 186 VEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDE 245
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A +LF+ M G PD + + I A C I A +VL M+ +PNV TYN ++K
Sbjct: 246 AYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVK 305
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGC 427
LCK ++++ Y+ LDEM ++ S P+ ++N + EV L RME+ C
Sbjct: 306 KLCKSEKVDEAYQLLDEMIERGVS--PDLWSYNAIQAFHCDHCEVNKALRLISRMEKENC 363
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY-DKGRLEDAL 486
TYN++LK+ + D+V W ME++G P +Y VM+HG KG+LE+A
Sbjct: 364 MPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEAC 423
Query: 487 SYFHEMRLKGMVPEPRTGILVNDMNIKL 514
YF M G+ P T L+ + I L
Sbjct: 424 KYFEMMIDDGIPPYSCTVELLRNRVIGL 451
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 107/253 (42%), Gaps = 14/253 (5%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
+N++L+ L + E ++F EM PD +Y I + Y + + A V
Sbjct: 229 AYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDAC---SYSIFIRAYCEVNDIHSAFQVL 285
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCV 269
DR + + + ++ + ++ LC+ + V+ A + E E G D+ + N I C
Sbjct: 286 DRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLD-EMIERGVSPDLWSYNAIQAFHCD 344
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
V +A R + K C PD TY + L + G+ ++ M E+G P T
Sbjct: 345 HCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAAST 404
Query: 330 CNCIIDALCFKK-RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
++ C KK ++ EA + M + G P T L + + E + +M
Sbjct: 405 YAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQIDVLAGKM 464
Query: 389 EQKNGSCLPNEIT 401
E ++ SC+ E++
Sbjct: 465 E-RSTSCVIQELS 476
>gi|11120809|gb|AAG30989.1|AC012396_25 hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 205/408 (50%), Gaps = 24/408 (5%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
++EKAL++ + LT ++ ++ R +++ + A+ FF W + YS +N ++D+L
Sbjct: 9 DMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILS 68
Query: 168 ----RARRFVELIQVFDEMPDLVNEKTYGI------LLNRYAAAHMVEEAIGVFDRRKEF 217
+ ++F +I + D M N KT + +L +Y ++ + F +RK
Sbjct: 69 STKYKNKQFRIVIDMLDYMKR--NNKTVVLVDVLLEILRKYCERYLTH--VQKFAKRKRI 124
Query: 218 --GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
+++AF LL LC+ V+ E ++ D T N++ GWC + + +
Sbjct: 125 RVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKK 184
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK---PDVVTCNC 332
A + +++I++ +P++ TY ++ + G + A LF M KG P T
Sbjct: 185 AMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFAL 244
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+I AL + E E++ M + GCLP+V+TY +I+ +C ++++ Y++LDEM K
Sbjct: 245 MIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKG 304
Query: 393 GSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
P+ +T+N L+ L +K +E + RM + C S TYN+++ ++ D D
Sbjct: 305 YP--PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 362
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+TW EM+K+ D +Y MI+GL+D R ++A E+ KG+
Sbjct: 363 AFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 410
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 120/291 (41%), Gaps = 39/291 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIGV 210
P +N FN + R R + +++ +EM + ++ TY ++ + A MV+EA +
Sbjct: 164 PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADL 223
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
FD G + L + + AE FE ++
Sbjct: 224 FDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFE---------------------LI 262
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G +I + C PD TY + + K+ A + M KG PD+VT
Sbjct: 263 GR----------MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTY 312
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
NC + LC ++ EAL++ M C P+V TYN LI ++ + + EM++
Sbjct: 313 NCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDK 372
Query: 391 KNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
++ C+ + T+ ++ L + +E ++LE + G K+ ++ L
Sbjct: 373 RD--CVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 421
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 192/389 (49%), Gaps = 11/389 (2%)
Query: 141 TFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNR 197
FF W S + + +N ++D G+ F D M V +T+ IL+ R
Sbjct: 79 AFFNWASNQDGFRKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFLILMRR 138
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDI 257
Y A + EAI F+R +++ D AF L+ LCR + A+ FF+S K++F D+
Sbjct: 139 YVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDKFEPDV 198
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
++ GWC GN+ EA+R + ++ + +P+ TY+ +++L + G++ A +F
Sbjct: 199 IVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAE 258
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M + G +P+ +T N ++ R + L+V +MK GC P+ TYN LI+ CK +
Sbjct: 259 MLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDEN 318
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTY 434
+E + + M +K C PN TFN L + K +V + ++M+ C+ +T TY
Sbjct: 319 LEDAIKVIGLMAKK--GCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTY 376
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N ++K++V D V EM++ + P+ +Y V+I G +A +F EM
Sbjct: 377 NTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMID 436
Query: 495 KGMVPEPRTGILVNDMNIKLKERGEQGKK 523
+ + R + V DM ++ + Q KK
Sbjct: 437 EKCL---RPSLPVYDMVLQQLRKAGQLKK 462
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 191/389 (49%), Gaps = 17/389 (4%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
V+N +L+VL + L V+ EM PD+V T+ L+ AH V A+ +
Sbjct: 152 VYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVV---TFNTLMKALCRAHQVRTAVLML 208
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK--TMNIILNGWCV 269
+ G D + F L+ ++ A ++ E G T+N+++NG+C
Sbjct: 209 EEMSSSGVAPDETTFTTLMQGFVEEGSIKAA-LRVKARMLEMGCSPTKVTVNVLINGYCK 267
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
LG V +A + + I + EPD +TY TFVN L + G +G AL++ M ++G PDV T
Sbjct: 268 LGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFT 327
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +++ LC ++ EA +L +M RGCLP++TT+N+LI LC R+E + ++
Sbjct: 328 YNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVT 387
Query: 390 QKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
K S P+ TFN L+ +L K P+ + E M+ +GC TYN ++ +
Sbjct: 388 LKGLS--PDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGK 445
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGIL 506
K +EME G +Y +I GL K R+E+A F +M L+G+ T
Sbjct: 446 LGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 505
Query: 507 VNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
+ D K K + + + ++ S GL+ N
Sbjct: 506 LIDGLCKDKRIDDANQLISQMISEGLQPN 534
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 170/362 (46%), Gaps = 15/362 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P +N ++ L + ++V D M PD+ TY I++N +E
Sbjct: 286 FEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVF---TYNIVVNCLCKNGQLE 342
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
EA G+ ++ E G L D++ F L++ LC +E A + + D+ T NI++
Sbjct: 343 EAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILI 402
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N C +G+ A R ++++ S C PD VTY T ++ L GKLG AL L + M G
Sbjct: 403 NALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCP 462
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
VT N IID LC K RI EA EV +M +G N T+N+LI LCK KR++ +
Sbjct: 463 RSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQL 522
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLY 441
+ +M + PN IT+N +L K ++ +L+ M NG ++ TY ++
Sbjct: 523 ISQMISE--GLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGL 580
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
M KGM ++Y +I L+ + DA++ F EM G P+
Sbjct: 581 CKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDA 640
Query: 502 RT 503
T
Sbjct: 641 FT 642
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 120/238 (50%), Gaps = 25/238 (10%)
Query: 282 DIIKSKCEP------DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
D++ ++ +P D+V Y +N L + K+ ++ M E+G KPDVVT N ++
Sbjct: 134 DLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMK 193
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK---IKRMETVYEYLDEMEQKN 392
ALC ++ A+ +L EM + G P+ TT+ +L++ + IK V + EM
Sbjct: 194 ALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEM---- 249
Query: 393 GSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED- 448
C P ++T N L+ L + E+ +++ NG + TYN +VN C++
Sbjct: 250 -GCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNT----FVNGLCQNG 304
Query: 449 KVRHTWEEME---KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
V H + M+ ++G PD +Y ++++ L G+LE+A ++M +G +P+ T
Sbjct: 305 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITT 362
>gi|15220863|ref|NP_178203.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200729|sp|Q9SAH2.1|PP137_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80880, mitochondrial; Flags: Precursor
gi|6503300|gb|AAF14676.1|AC011713_24 Contains PF|01535 Domain of unknown function [Arabidopsis thaliana]
gi|91806121|gb|ABE65789.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198342|gb|AEE36463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 540
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 218/439 (49%), Gaps = 14/439 (3%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
I + + ++ + +L L D ++I R +W A+ FKW + G
Sbjct: 98 IRQVSELESEADAMASLEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEKRG--CDDQ 155
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPDLVNE--KTYGILLNRYAAAHMVEEAIGVFDRR 214
+ ++ VLG ++F + +M ++ + K ++++RYAAA+ +AI FD
Sbjct: 156 KSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDIM 215
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC-VLGNV 273
+F AFQ LL LCR+ H+E AE F + K F D++ N+ILNGWC + +V
Sbjct: 216 DKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDV 275
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EAKR W+++ P+ +Y+ ++ +K G L +LRL+ M ++G P + N +
Sbjct: 276 TEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSL 335
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
+ L + EA+++++++ G P+ TYNS+I+ LC+ +++ L M +N
Sbjct: 336 VYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENL 395
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVIL-KLYVNWDCEDKVRH 452
S P TF+ L+++ E+ VL +M+ + + +T+ +IL KL+ E+ ++
Sbjct: 396 S--PTVDTFHAFLEAVNF-EKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALK- 451
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNI 512
W EM++ + + Y I GL G LE A + EM+ KG V P L+ + +
Sbjct: 452 IWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPMLQKLLEEQKV 511
Query: 513 KLKERGEQGKKVIKLTSLG 531
K G + K + L +G
Sbjct: 512 K----GVRKSKRMNLQKVG 526
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 211/452 (46%), Gaps = 17/452 (3%)
Query: 76 SDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFD 135
S E +EF E I+ + + + ++ I A++ C + +T L+ ++ R+ D
Sbjct: 92 SHEDAEF------EADIDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSND 145
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV---ELIQVFDEMPDLVNEKTYG 192
W AA+ FF WV +G Y ++ ++ ++D+LG+ ++F LI E+ L++ T
Sbjct: 146 WVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMT 205
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
++ R A A EAI F + FG + D A LL LC+ + V+ A F+ +
Sbjct: 206 KVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT 265
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D + N +++GWC + EA +++ + P VTY + V A + T
Sbjct: 266 IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY 325
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L M ++ P+VVT ++ AL R EAL+ ++K G P+ + YNSLI L
Sbjct: 326 ALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYIL 385
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
+ R+E Y ++EM + PN TFN L+ + + E +L +ME C
Sbjct: 386 GRAGRLEDAYSVVEEM--RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 443
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TY +LKL + M +K + PD +YT+++ L G++ + +
Sbjct: 444 DIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFL 503
Query: 490 HEMRLKGMVPEPRTGILVNDMNIKLKERGEQG 521
EM KG P+ T LV + KL++R Q
Sbjct: 504 EEMVSKGFAPKQETFDLVME---KLEKRNLQS 532
>gi|297839201|ref|XP_002887482.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333323|gb|EFH63741.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 490
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 207/408 (50%), Gaps = 24/408 (5%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
++EKAL+ + LT ++ ++ R +++ + A+ FF W + YS +N ++D+L
Sbjct: 9 DMEKALDDSVVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILS 68
Query: 168 ----RARRFVELIQVFDEMPDLVNEKTY---GILLN---RYAAAHMVEEAIGVFDRRKEF 217
+ ++F +I + D M N+KT ILL +Y ++ + F +RK
Sbjct: 69 STKYKNKQFRIVIDMLDYMKR--NKKTVVPADILLEILRKYCERYLTH--VQKFAKRKRI 124
Query: 218 --GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
+++AF LL LC+ V+ E ++ D T N++ GWC + + +
Sbjct: 125 RVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDATTFNVLFFGWCRVRDPKK 184
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR---KPDVVTCNC 332
A + +++I++ +P++ TY ++ + G + A LF+ M KG P T
Sbjct: 185 AMKLLEEMIQAGHKPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAKTFAL 244
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+I AL + E E++ M + GCLP+V+TY +I+ +C ++E Y++LDEM K
Sbjct: 245 MIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKG 304
Query: 393 GSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
P+ +T+N L+ L +K +E + RM + C S TYN+++ ++ D D
Sbjct: 305 YP--PDIVTYNCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 362
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+TW+EM+++ D +Y VMI+GL+D R ++A E+ KG+
Sbjct: 363 AFNTWKEMDERDCVQDIETYCVMINGLFDCHRAKEACFLLEEVVNKGL 410
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 120/291 (41%), Gaps = 39/291 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIGV 210
P + FN + R R + +++ +EM ++ TY ++ + A MV+EA +
Sbjct: 164 PDATTFNVLFFGWCRVRDPKKAMKLLEEMIQAGHKPENFTYCAAIDTFCQAGMVDEAADL 223
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
F+ G + + L + + AE FE ++
Sbjct: 224 FEFMITKGSVVSAPTAKTFALMIVALAKNDKAEECFE---------------------LI 262
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G +I + C PD TY + + GK+ A + M KG PD+VT
Sbjct: 263 GR----------MISTGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGYPPDIVTY 312
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
NC + LC ++ EAL++ M C P+V TYN LI ++ + + EM++
Sbjct: 313 NCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWKEMDE 372
Query: 391 KNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
++ C+ + T+ ++ L + +E ++LE + G K+ ++ L
Sbjct: 373 RD--CVQDIETYCVMINGLFDCHRAKEACFLLEEVVNKGLKLPYRAFDSFL 421
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 9/183 (4%)
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+P++ N ++DALC + E +LR M++R P+ TT+N L C+++ + +
Sbjct: 129 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDATTFNVLFFGWCRVRDPKKAMK 187
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
L+EM Q P T+ + + + +E + E M G +S T +
Sbjct: 188 LLEEMIQAGHK--PENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAKTFALM 245
Query: 441 YVNWDCEDKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
V DK +E M G PD +Y +I G+ G++E+A + EM KG
Sbjct: 246 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGY 305
Query: 498 VPE 500
P+
Sbjct: 306 PPD 308
>gi|357156708|ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Brachypodium distachyon]
Length = 522
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 185/379 (48%), Gaps = 26/379 (6%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
++ ++A++D LGRA +F ++ E +T+ +L RY AA M +A+ FD
Sbjct: 114 ADAYDAVVDALGRAHQFDAAWRLVVEAAADGAATSRTFAVLARRYVAAGMTRQAVRAFDD 173
Query: 214 RKEF-GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGN 272
+ F G D F LL LC+YK+ +VA F K ++ + K I++ GWC +
Sbjct: 174 MEAFVGREPDAGEFTTLLDTLCKYKYPKVATEVFNKRKYKYEPNEKMYTILIYGWCKVNR 233
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG----------TALRLFQAMWEKG 322
+++F KD+I EP+ VTY +N + + L A L + M ++G
Sbjct: 234 NDMSQKFLKDMIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAEDLLKEMRDRG 293
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+PDV + + ++ + L + R MK+RG P V TY S+IK L R+E
Sbjct: 294 IEPDVTSYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAE 353
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTD--TYNVI 437
L EM + G C P+ T+N K + ++V LE +M+ + D +Y+++
Sbjct: 354 RLLHEMASE-GVC-PSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPDIHSYHIL 411
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
L ++V + V W +M + +GPD SYT++IHG + + +A +F EM KG
Sbjct: 412 LGMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFMEMIEKGF 471
Query: 498 VPEPRT------GILVNDM 510
+P+ T G++ DM
Sbjct: 472 LPQKITFEILYRGLIQADM 490
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 6/201 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+ +Y I+L+ Y+ AH E + +F K+ G ++ + +++ L +E A
Sbjct: 296 PDVT---SYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDA 352
Query: 243 ETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDI--IKSKCEPDSVTYATFV 299
E +E T N + +V A +K + S PD +Y +
Sbjct: 353 ERLLHEMASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPDIHSYHILL 412
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
K + GT L+ M E PD+ + +I C ++ EA + EM +G L
Sbjct: 413 GMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFMEMIEKGFL 472
Query: 360 PNVTTYNSLIKHLCKIKRMET 380
P T+ L + L + + T
Sbjct: 473 PQKITFEILYRGLIQADMLRT 493
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 205/417 (49%), Gaps = 30/417 (7%)
Query: 88 DEIAINVQN---ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFK 144
DE A +V+ IL+ S ++E ALN+ + L LI V+NR Y FF
Sbjct: 70 DEFASDVEKSYRILRKFH-SRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFV 128
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAA 200
W +++ Y V+ +++ +L + R+F + + +EM P L+ + + +L+ R+A+
Sbjct: 129 WAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFAS 188
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM 260
A MV++AI V D +FG D F LL LC++ V+ A FE +
Sbjct: 189 ADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-------- 240
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+G + EAK + ++ EPD V Y ++ GK+ A L + M
Sbjct: 241 ---------VGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRR 291
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G +P+ +I ALC R+ EA++V EM+ C +V TY +L+ CK +++
Sbjct: 292 RGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDK 351
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER-NGCKMSTD--TYNVI 437
Y LD+M +K +P+E+T+ +++ + +K E LE ME+ + D YNV+
Sbjct: 352 CYIVLDDMIKKG--LMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVV 409
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++L + W EME+ G+ P ++ +MI+GL +G L +A +F EM L
Sbjct: 410 IRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMLL 466
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 206/438 (47%), Gaps = 14/438 (3%)
Query: 72 SLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINR 131
SL S + + P D AI ++ + +T + + L+ T +L+ +V+ R
Sbjct: 8 SLCTSAAGANLKPPPADSAAI--AKLILSSPNTTHQDDQFLLSTKTTPWTPNLVNSVLKR 65
Query: 132 YRFDWEAAYTFFKWV-SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VN 187
A FF ++ + +Y ++ F+ +D+ R + + M L +
Sbjct: 66 LWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPS 125
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
KT+ I+ RYA+A ++A+ +F E G DL++F +L LC+ K VE A F
Sbjct: 126 PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 185
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ + F D T N+ILNGWC++ +A K++++ P+ TY T + + G+
Sbjct: 186 ALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A F M ++ + DVVT ++ I A V EM G LP+V TYN+
Sbjct: 246 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNA 305
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMER 424
+I+ LCK +E +EM ++ PN T+N L++ L E +++RME
Sbjct: 306 MIQVLCKKDNVENAVVMFEEMVRRGYE--PNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
GC+ + TYN++++ Y +K +E+M P+ +Y ++I G++ + R ED
Sbjct: 364 EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Query: 485 ---ALSYFHEMRLKGMVP 499
A EM +G +P
Sbjct: 424 MVVAGKLLLEMVERGFIP 441
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 10/256 (3%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E +P +N +L RA + + F EM ++ TY +++ + A ++
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNII 263
A VFD G L ++ + ++ LC+ +VE A FE E GY+ + T N++
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFE-EMVRRGYEPNVTTYNVL 341
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G G + + + CEP+ TY + ++ ++ AL LF+ M
Sbjct: 342 IRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDC 401
Query: 324 KPDVVTCNCIIDALCFKKRIPE---ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
P++ T N +I + +KR + A ++L EM RG +P T+N ++ L
Sbjct: 402 LPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAF 461
Query: 381 VYEYLDEMEQKNGSCL 396
E L ++ K+GS L
Sbjct: 462 AKEIL-RLQSKSGSRL 476
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 207/437 (47%), Gaps = 16/437 (3%)
Query: 104 STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAIL 163
S + + L+ + T L+ ++ R D A FF +S YS + ++ +
Sbjct: 49 SNPQALAQTLHSPTIQWTPQLVNTILKRLWNDGPKALQFFNLLSHHPSYSHHPSSYDHAI 108
Query: 164 DVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
D+ R R L + M KT+ I+ RYA+A A+ VF +FG
Sbjct: 109 DISARLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCF 168
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
DL +F +L LC+ K VE+A F+ K +F D + N+++NGWC++ +A
Sbjct: 169 QDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEML 228
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
K+++K P+ +Y T + + G++ A F M ++ + DV+T +I
Sbjct: 229 KEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVA 288
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
I A +V M +G LP+V TYN+ I+ LCK ++ +EM K +PN I
Sbjct: 289 GEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVK--GYVPNSI 346
Query: 401 TFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T+N +++ L E+ +E RM+ +GC+ + TYN++++ + + DK +++M
Sbjct: 347 TYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKM 406
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDAL---SYFHEMRLKGMVPEPRTGILVNDMNIKL 514
P+ +Y ++I ++ + + +D L + EM +G VP T N + L
Sbjct: 407 TSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFT---FNRVLNGL 463
Query: 515 KERGEQG--KKVIKLTS 529
G QG K++++L S
Sbjct: 464 LLTGNQGFAKEILRLQS 480
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 206/446 (46%), Gaps = 14/446 (3%)
Query: 68 QLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVN 127
++ S S E +EF+ DE V IL++ ++ I ++ C + ++ L+
Sbjct: 115 SILASCPASHEDAEFE-ADMDE----VSRILRS-RFASPEAIVITMDCCPVRVSARLVSK 168
Query: 128 VINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF---VELIQVFDEMPD 184
V++R+ DW AA+ FF W + Y ++ ++ ++D+LG+ ++F LI E+
Sbjct: 169 VLSRFSNDWVAAFGFFMWAGTQEGYCHCADSYDMMVDILGKFKQFDLMCGLIGQMHEIGG 228
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
LV+ T ++ R A+ +AI F + FG D A LL LC+ + V+ A
Sbjct: 229 LVSLATMTKVMRRLCGANRWSDAIDAFHKMDRFGVAKDTKAMNVLLDTLCKERSVKRARG 288
Query: 245 FFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
F++ K D + N +++GWC + EA+ K++ + P TY + A
Sbjct: 289 AFQALKGTIPPDESSFNTLVHGWCKARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCM 348
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
+ T + M KG P+++T ++ AL R EAL+ ++K GC + +
Sbjct: 349 EKDFQTVDGILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASF 408
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLER 421
YN LI LC+ R++ ++EM + S PN TFN L+ + E +L +
Sbjct: 409 YNCLIYILCRAGRLQDANFVVEEMHRTGIS--PNLTTFNTLISAACDHSLAENALKLLVQ 466
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
ME C TY +LKL + M +K + PD +YT+++ L GR
Sbjct: 467 MEEQSCNPDIKTYTPLLKLCCRRKWVKTLLFLICHMFRKDITPDFSTYTLLVCWLCRNGR 526
Query: 482 LEDALSYFHEMRLKGMVPEPRTGILV 507
L + + EM LKG P+ T LV
Sbjct: 527 LTQSCLFLEEMVLKGFTPQQATFDLV 552
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 11/246 (4%)
Query: 143 FKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLN 196
K + R G +SP + +++ + F + + DEM P+++ TY I+++
Sbjct: 324 MKEMERHG-FSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNII---TYTIVMH 379
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGY 255
A +EA+ FD+ K+ G D S + L+ LCR ++ A E +
Sbjct: 380 ALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTGISP 439
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
++ T N +++ C A + + + C PD TY + ++ + T L L
Sbjct: 440 NLTTFNTLISAACDHSLAENALKLLVQMEEQSCNPDIKTYTPLLKLCCRRKWVKTLLFLI 499
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M+ K PD T ++ LC R+ ++ L EM +G P T++ +++ L +
Sbjct: 500 CHMFRKDITPDFSTYTLLVCWLCRNGRLTQSCLFLEEMVLKGFTPQQATFDLVLEKLKNM 559
Query: 376 KRMETV 381
+ V
Sbjct: 560 HMLSAV 565
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 211/452 (46%), Gaps = 17/452 (3%)
Query: 76 SDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFD 135
S E +EF E I+ + + + ++ I A++ C + +T L+ ++ R+ D
Sbjct: 151 SHEDAEF------EADIDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSND 204
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV---ELIQVFDEMPDLVNEKTYG 192
W AA+ FF WV +G Y ++ ++ ++D+LG+ ++F LI E+ L++ T
Sbjct: 205 WVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMT 264
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
++ R A A EAI F + FG + D A LL LC+ + V+ A F+ +
Sbjct: 265 KVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT 324
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D + N +++GWC + EA +++ + P VTY + V A + T
Sbjct: 325 IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY 384
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L M ++ P+VVT ++ AL R EAL+ ++K G P+ + YNSLI L
Sbjct: 385 ALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYIL 444
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
+ R+E Y ++EM + PN TFN L+ + + E +L +ME C
Sbjct: 445 GRAGRLEDAYSVVEEM--RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 502
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TY +LKL + M +K + PD +YT+++ L G++ + +
Sbjct: 503 DIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFL 562
Query: 490 HEMRLKGMVPEPRTGILVNDMNIKLKERGEQG 521
EM KG P+ T LV + KL++R Q
Sbjct: 563 EEMVSKGFAPKQETFDLVME---KLEKRNLQS 591
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 186/362 (51%), Gaps = 17/362 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + FN ++ L + E + + D+M PDLV TYG ++N
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV---TYGAVVNGLCKRG 234
Query: 203 MVEEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTM 260
++ A+ + ++ E G+++ D+ + ++ LC+YKH++ A F + E D+ T
Sbjct: 235 DIDLALSLL-KKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTY 293
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N +++ C G +A R ++I+ K P+ VT++ ++A K+GKL A +L+ M +
Sbjct: 294 NSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+ PD+ T + +I+ C R+ EA + M ++ C PNV TYN+LIK CK KR+E
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVI 437
E EM Q+ + N +T+N L++ L + + + ++M +G TY+++
Sbjct: 414 GMELFREMSQRG--LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
L + +K +E ++K M PD +Y +MI G+ G++ED F + LKG+
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 498 VP 499
P
Sbjct: 532 KP 533
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 180/365 (49%), Gaps = 21/365 (5%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV--NEKTYGILLNRYAAAHM 203
Y P +++L+ ++R + + + D+M PD V N +G+ L+ A+
Sbjct: 146 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS--- 202
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
EA+ + D+ + G DL + ++ LC+ +++A + + EK + D+ N
Sbjct: 203 --EAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 260
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
I++G C ++ +A + + PD TY + ++ L G+ A RL M E+
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P+VVT + +IDA + ++ EA ++ EM R P++ TY+SLI C R++
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK 439
+ M K+ C PN +T+N L+K K+ EE + M + G +T TYN +++
Sbjct: 381 HMFELMISKD--CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 440 -LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
L+ DC D + +++M G+ PD +Y++++ GL G+LE AL F ++ M
Sbjct: 439 GLFQAGDC-DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 499 PEPRT 503
P+ T
Sbjct: 498 PDIYT 502
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 174/389 (44%), Gaps = 55/389 (14%)
Query: 160 NAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
NA+L++ + + I +F EM P +V + LL+ A + I + +R
Sbjct: 54 NALLNL-----KLDDAIGLFGEMVQSRPLPSIVE---FNKLLSAIAKMKKFDLVISLGER 105
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLG 271
+ DL ++ L+ CR + +A + + GY DI T++ +LNG+C
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVL-GKMMKLGYEPDIVTLSSLLNGYCHSK 164
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ +A +++ +PD+VT+ T ++ L K A+ L M ++G +PD+VT
Sbjct: 165 RISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 224
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+++ LC + I AL +L++M+ +V YN++I LCK K ++ + ++ME K
Sbjct: 225 AVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETK 284
Query: 392 N-----------GSCL----------------------PNEITFNYLLKSLKKPEEVPWV 418
SCL PN +TF+ L+ + K ++
Sbjct: 285 GIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 419 LERMERNGCKMSTD----TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
E++ K S D TY+ ++ + D D+ +H +E M K P+ +Y +I
Sbjct: 345 -EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G R+E+ + F EM +G+V T
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 142/313 (45%), Gaps = 15/313 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + VE +++DEM PD+ TY L+N + ++E
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF---TYSSLINGFCMHDRLDE 378
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F+ ++ + L+ C+ K VE E F E + + T N ++
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G+ A++ +K ++ PD +TY+ ++ L K GKL AL +F+ + + +P
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T N +I+ +C ++ + ++ + +G PNV Y ++I C+ E
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 386 DEMEQKNGSCLPNEITFNYLLKS-LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
EM K LP+ +N L+++ L+ ++ E C D + + +N
Sbjct: 559 REM--KEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI--SMVINM 614
Query: 445 DCEDKVRHTWEEM 457
+ ++ ++ EM
Sbjct: 615 LHDGRLEKSYLEM 627
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 96/244 (39%), Gaps = 42/244 (17%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEK 189
R D EA + F +S+ D P +N ++ +A+R E +++F EM + N
Sbjct: 375 RLD-EAKHMFELMISK--DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY L+ A + A +F + G D+ + LL LC+Y +E A FE
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVY---------------------------------- 274
+K++ DI T NI++ G C G V
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 275 -EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA ++++ + PDS Y T + A + G + L + M G D T + +
Sbjct: 552 EEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Query: 334 IDAL 337
I+ L
Sbjct: 612 INML 615
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 188/362 (51%), Gaps = 17/362 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + FN ++ L + E + + D M PDL TYG ++N
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF---TYGTVVNGLCKRG 235
Query: 203 MVEEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTM 260
++ A+ + ++ E G+++ ++ + ++ LC+YKH++ A + F + E D+ T
Sbjct: 236 DIDLALSLL-KKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 294
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N +++ C G +A R D+I+ K P+ VT+ + ++A K+GKL A +LF M +
Sbjct: 295 NSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 354
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+ P++VT N +I+ C R+ EA ++ M ++ CLP+V TYN+LIK CK KR+E
Sbjct: 355 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEE 414
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVI 437
E EM Q+ + N +T+N L++ L + + + ++M +G TY+++
Sbjct: 415 GMELFREMSQRG--LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 472
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
L + +K +E ++K M P+ +Y +MI G+ G++ED F + LKG+
Sbjct: 473 LDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 498 VP 499
P
Sbjct: 533 KP 534
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 175/411 (42%), Gaps = 52/411 (12%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT 190
R F + +Y + + +SR G + A+ + ++R F +I+
Sbjct: 37 RRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIE------------- 83
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
+ LL+ A + + I + ++ + G + + LL CR + +A +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVL-GKM 142
Query: 251 NEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ GY DI T++ +LNG+C + EA +++ +PD+VT+ T ++ L K
Sbjct: 143 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKA 202
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A+ L M +G +PD+ T +++ LC + I AL +L++M+ NV YN++
Sbjct: 203 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTI 262
Query: 369 IKHLCKIKRMETVYEYLDEMEQKN-----------GSCL--------------------- 396
I LCK K M+ ++ ++ME K SCL
Sbjct: 263 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 397 -PNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
PN +TFN L+ + K E + + M + + TYN ++ + D D+ +
Sbjct: 323 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 382
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ M K PD +Y +I G R+E+ + F EM +G+V T
Sbjct: 383 IFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 433
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 143/313 (45%), Gaps = 15/313 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P FN+++D + + +E ++FDEM P++V TY L+N + ++E
Sbjct: 323 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV---TYNSLINGFCMHDRLDE 379
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F L D+ + L+ C+ K VE E F E + + T N ++
Sbjct: 380 AQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 439
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G+ A++ +K ++ PD +TY+ ++ L K GKL AL +F+ + + +P
Sbjct: 440 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 499
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
++ T N +I+ +C ++ + ++ + +G PNV Y ++I C+ E
Sbjct: 500 NIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 559
Query: 386 DEMEQKNGSCLPNEITFNYLLKS-LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
EM K LP+ +N L+++ L+ ++ E C D + + +N
Sbjct: 560 REM--KEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI--SMVINM 615
Query: 445 DCEDKVRHTWEEM 457
+ ++ ++ EM
Sbjct: 616 LHDGRLEKSYLEM 628
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 12/241 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF------DEMPDLVNEKT 190
EA F + + R D P +N++++ R E Q+F D +PD+V T
Sbjct: 344 EAEKLFDEMIQRSID--PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV---T 398
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y L+ + A VEE + +F + G + + + L+ L + ++A+ F+
Sbjct: 399 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 458
Query: 251 NE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
++ DI T +I+L+G C G + +A ++ + KSK EP+ TY + + K GK+
Sbjct: 459 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVE 518
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
LF ++ KG KP+V+ +I C K EA + REMK G LP+ YN+LI
Sbjct: 519 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 578
Query: 370 K 370
+
Sbjct: 579 R 579
>gi|357506905|ref|XP_003623741.1| hypothetical protein MTR_7g075210 [Medicago truncatula]
gi|355498756|gb|AES79959.1| hypothetical protein MTR_7g075210 [Medicago truncatula]
Length = 292
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 116/181 (64%), Gaps = 25/181 (13%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
+IE+ALN + +L++ ++ R+R DW+ A+ FFKWV++ +Y+P V+N I+++LG
Sbjct: 118 QIERALNLTGIHPDSNLVLELLQRHRSDWKPAFIFFKWVTKTNNYTPSCEVYNEIINILG 177
Query: 168 RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG---ELDDLS 224
+ +RF EL QVF AAH VEE I +F R+EFG ELD
Sbjct: 178 KMKRFEELHQVF-------------------VAAHKVEELINIFHIREEFGLDNELDS-E 217
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKD 282
F+ LL+W+CRYKH+E AET F N+FG+ DIKT N+ILNGWCVLGN +EAKR WKD
Sbjct: 218 TFRTLLMWMCRYKHIEEAETLFHRNLNKFGFCRDIKTWNVILNGWCVLGNTHEAKRLWKD 277
Query: 283 I 283
I
Sbjct: 278 I 278
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 211/451 (46%), Gaps = 17/451 (3%)
Query: 76 SDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFD 135
S E +EF E I+ + + + ++ I A++ C + +T L+ ++ R+ D
Sbjct: 1412 SHEDAEF------EADIDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSND 1465
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF---VELIQVFDEMPDLVNEKTYG 192
W AA+ FF WV +G Y ++ ++ ++D+LG+ ++F LI E+ L++ T
Sbjct: 1466 WVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMT 1525
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
++ R A A EAI F + FG + D A LL LC+ + V+ A F+ +
Sbjct: 1526 KVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT 1585
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D + N +++GWC + EA +++ + P VTY + V A + T
Sbjct: 1586 IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY 1645
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L M ++ P+VVT ++ AL R EAL+ ++K G P+ + YNSLI L
Sbjct: 1646 ALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYIL 1705
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
+ R+E Y ++EM + PN TFN L+ + + E +L +ME C
Sbjct: 1706 GRAGRLEDAYSVVEEM--RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 1763
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TY +LKL + M +K + PD +YT+++ L G++ + +
Sbjct: 1764 DIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFL 1823
Query: 490 HEMRLKGMVPEPRTGILVNDMNIKLKERGEQ 520
EM KG P+ T LV + KL++R Q
Sbjct: 1824 EEMVSKGFAPKQETFDLVME---KLEKRNLQ 1851
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 197/406 (48%), Gaps = 13/406 (3%)
Query: 104 STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAIL 163
S + +L+ +L T +L+ V+ R F A FFK + Y+ ++ F+ +
Sbjct: 60 SDPKSLRGSLHGLQLQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSYAHSASSFDHAI 119
Query: 164 DVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
D+ GR R + + + M + KT+ I+ R+ AA + AI VF +E G
Sbjct: 120 DIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCP 179
Query: 221 DDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
DL +F +L LC+ K VE+A F+ + +F D+ + NII NGWC++ +A
Sbjct: 180 QDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEV 239
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K++++ P TY + + G+L A F M E+ + DVVT ++
Sbjct: 240 LKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGV 299
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
I A +V EM G LP+ TYN++I+ LCK +E +EM +K +PN
Sbjct: 300 VGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKK--GYVPNL 357
Query: 400 ITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
T+N +++ L ++ +ERM+ +GC+ + TYNV ++ + + +K +E+
Sbjct: 358 TTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEK 417
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLED---ALSYFHEMRLKGMVP 499
M +G P+ +Y V+I ++ + + ED A EM +G +P
Sbjct: 418 M-GQGSLPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIP 462
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 124/254 (48%), Gaps = 7/254 (2%)
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
G KT II + G A + + + + C D ++ T ++ L K ++ A
Sbjct: 144 GPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYN 203
Query: 314 -LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
LF+ + K K DVV+ N I + C KR P+ALEVL+EM RG P +TTYN L+K
Sbjct: 204 NLFKVLRGKF-KADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGY 262
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKM 429
+ +++ +E+ +M+++ + +T+ ++ E+ V M G
Sbjct: 263 FRAGQLKEAWEFFLQMKEREVEI--DVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILP 320
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
ST TYN ++++ D + +EEM KKG P+ +Y V+I GL+ G ++ A+ +
Sbjct: 321 STATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFI 380
Query: 490 HEMRLKGMVPEPRT 503
M+ G P +T
Sbjct: 381 ERMKTDGCEPNVQT 394
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 110/232 (47%), Gaps = 10/232 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E +P +N +L RA + E + F +M + ++ TY +++ + ++
Sbjct: 245 ERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIK 304
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNII 263
A VF+ G L + + ++ LC+ VE A FE E + GY ++ T N++
Sbjct: 305 RARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFE-EMVKKGYVPNLTTYNVV 363
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G GN+ +A F + + CEP+ TY + G + L +F+ M + G
Sbjct: 364 IRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQ-GS 422
Query: 324 KPDVVTCNCIIDALCFKKRIPE---ALEVLREMKNRGCLPNVTTYNSLIKHL 372
P++ T N +I A+ +K+ + A ++L EM +RG +P T+N ++ L
Sbjct: 423 LPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGL 474
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 211/451 (46%), Gaps = 17/451 (3%)
Query: 76 SDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFD 135
S E +EF E I+ + + + ++ I A++ C + +T L+ ++ R+ D
Sbjct: 1371 SHEDAEF------EADIDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSND 1424
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF---VELIQVFDEMPDLVNEKTYG 192
W AA+ FF WV +G Y ++ ++ ++D+LG+ ++F LI E+ L++ T
Sbjct: 1425 WVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMT 1484
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
++ R A A EAI F + FG + D A LL LC+ + V+ A F+ +
Sbjct: 1485 KVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT 1544
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D + N +++GWC + EA +++ + P VTY + V A + T
Sbjct: 1545 IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY 1604
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L M ++ P+VVT ++ AL R EAL+ ++K G P+ + YNSLI L
Sbjct: 1605 ALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYIL 1664
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
+ R+E Y ++EM + PN TFN L+ + + E +L +ME C
Sbjct: 1665 GRAGRLEDAYSVVEEM--RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 1722
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TY +LKL + M +K + PD +YT+++ L G++ + +
Sbjct: 1723 DIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFL 1782
Query: 490 HEMRLKGMVPEPRTGILVNDMNIKLKERGEQ 520
EM KG P+ T LV + KL++R Q
Sbjct: 1783 EEMVSKGFAPKQETFDLVME---KLEKRNLQ 1810
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 178/357 (49%), Gaps = 12/357 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++ + +Q+ D M PD+V TY +L + ++EA+ V
Sbjct: 178 PDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVV---TYNTILRTLCDSGKLKEAMEV 234
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
DR+ + D+ + L+ C+ V A + +++ D+ T N+++NG C
Sbjct: 235 LDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICK 294
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA RF + C+P+ +T+ + ++ G+ A + M KG P VVT
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVT 354
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I+ LC K I A++VL +M GC PN +YN L+ LCK K+ME EYLD M
Sbjct: 355 FNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMV 414
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ C P+ +T+N LL +L K +V +L ++ GC TYN ++
Sbjct: 415 SR--GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGK 472
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D +EM+ KG+ PD +Y+ ++ GL +G++++A+++FH++ G+ P T
Sbjct: 473 TDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAIT 529
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 138/319 (43%), Gaps = 50/319 (15%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
DI ++ G C G ++A R + + S PD +TY ++ K G++G+AL+L
Sbjct: 144 DIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLL 203
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV-------------------------- 349
M PDVVT N I+ LC ++ EA+EV
Sbjct: 204 DRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKE 260
Query: 350 ---------LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
L EM+++GC P+V TYN LI +CK R++ +L+ M C PN I
Sbjct: 261 SGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSY--GCQPNVI 318
Query: 401 TFNYLLKSLKKPEEVPWV-----LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
T N +L+S+ W+ L M R GC S T+N+++ + E
Sbjct: 319 THNIILRSMCSTGR--WMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLE 376
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLK 515
+M + G P+ SY ++H L ++E A+ Y M +G P+ T N + L
Sbjct: 377 KMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVT---YNTLLTALC 433
Query: 516 ERGEQGKKVIKLTSLGLKG 534
+ G+ V L LG KG
Sbjct: 434 KDGKVDVAVEILNQLGSKG 452
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 162/359 (45%), Gaps = 24/359 (6%)
Query: 65 ETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQ-----C--E 117
++ +L ++ D + + + YP D I + I TC S G+ K L++ C +
Sbjct: 224 DSGKLKEAMEVLDRQMQRECYP-DVITYTIL-IEATCKESGVGQAMKLLDEMRDKGCKPD 281
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
+ + LI + R D A F + G P N IL + R+++ +
Sbjct: 282 VVTYNVLINGICKEGRLD--EAIRFLNHMPSYG-CQPNVITHNIILRSMCSTGRWMDAEK 338
Query: 178 VFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
EM P +V T+ IL+N ++ AI V ++ + G + ++ LL
Sbjct: 339 FLAEMIRKGCSPSVV---TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLH 395
Query: 232 WLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
LC+ K +E A + + + Y DI T N +L C G V A + C P
Sbjct: 396 ALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSP 455
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+TY T ++ L+K GK A++L M KG KPD++T + ++ L + ++ EA+
Sbjct: 456 VLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFF 515
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+++ G PN TYNS++ LCK ++ ++L M + C P E ++ L++ L
Sbjct: 516 HDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVAR--GCKPTETSYMILIEGL 572
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 113/242 (46%), Gaps = 9/242 (3%)
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G + E +F +D++ PD + + + L K GK A R+ + + + G PDV+T
Sbjct: 124 GELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITY 183
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +I C I AL++L M P+V TYN++++ LC +++ E LD Q
Sbjct: 184 NVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ C P+ IT+ L+++ K V +L+ M GCK TYNV++
Sbjct: 241 R--ECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GIL 506
D+ M G P+ ++ +++ + GR DA + EM KG P T IL
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNIL 358
Query: 507 VN 508
+N
Sbjct: 359 IN 360
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 8/201 (3%)
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L + G+L + + M +G PD++ C +I LC + +A V+ +++ G +P+
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V TYN LI CK + + + LD M S P+ +T+N +L++L K +E V
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRM-----SVSPDVVTYNTILRTLCDSGKLKEAMEV 234
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L+R + C TY ++++ + +EM KG PD +Y V+I+G+
Sbjct: 235 LDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICK 294
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
+GRL++A+ + + M G P
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQP 315
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 74/189 (39%), Gaps = 37/189 (19%)
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
E + L +M RG +P++ SLI+ LCK + ++ +E +P+ IT+N
Sbjct: 128 EGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA--VPDVITYNV 185
Query: 405 LLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
L+ K E+ L+ ++R MS + P
Sbjct: 186 LISGYCKTGEIGSALQLLDR----MS-------------------------------VSP 210
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKV 524
D +Y ++ L D G+L++A+ + P+ T ++ + K G+ K +
Sbjct: 211 DVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLL 270
Query: 525 IKLTSLGLK 533
++ G K
Sbjct: 271 DEMRDKGCK 279
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 174/351 (49%), Gaps = 17/351 (4%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
V+N +L+VL + L V+ EM PD+V T+ L+ AH V A+ +
Sbjct: 56 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVV---TFNTLMKALCRAHQVRTAVLML 112
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK--TMNIILNGWCV 269
+ G D + F L+ +E A ++ E G T+N+++NG+C
Sbjct: 113 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAA-LRVKARMLEMGCSATKVTVNVLINGYCK 171
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
LG V +A + + I EPD +TY TFVN L + +G AL++ M ++G PDV T
Sbjct: 172 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 231
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +++ LC ++ EA +L +M +RGCLP++TT+N+LI LC R+E + ++
Sbjct: 232 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 291
Query: 390 QKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
K S P+ TFN L+ +L K P + E M+ +GC TYN ++ +
Sbjct: 292 VKGVS--PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 349
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
K ++ME G +Y +I GL K R+E+A F +M L+G+
Sbjct: 350 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 400
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 174/362 (48%), Gaps = 15/362 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P +N ++ L + ++V D M PD+ TY I++N +E
Sbjct: 190 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF---TYNIVVNCLCKNGQLE 246
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
EA G+ ++ + G L D++ F L+ LC +E A + + D+ T NI++
Sbjct: 247 EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 306
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N C +G+ + A R ++++ S C PD VTY T ++ L GKLG AL L + M G
Sbjct: 307 NALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCP 366
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
+T N IID LC K RI EA EV +M +G N T+N+LI LCK K+++ +E
Sbjct: 367 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 426
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLY 441
+++M + PN IT+N +L K ++ +LE M NG ++ TY ++
Sbjct: 427 INQMISE--GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 484
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
M KGM P ++Y ++ L+ + + DALS F EM G P+
Sbjct: 485 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 544
Query: 502 RT 503
T
Sbjct: 545 LT 546
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 122/246 (49%), Gaps = 22/246 (8%)
Query: 274 YEAKRFWKD---IIKSKCEP------DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
YE ++ + D +I ++ +P D+V Y +N L + K+ ++ M +G K
Sbjct: 27 YEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIK 86
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDVVT N ++ ALC ++ A+ +L EM +RG P+ TT+ +L++ + +E
Sbjct: 87 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 146
Query: 385 LDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
M + C ++T N L+ L + E+ +++ +G + TYN +
Sbjct: 147 KARMLEM--GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT----F 200
Query: 442 VNWDCE-DKVRHTWEEME---KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
VN C+ D V H + M+ ++G PD +Y ++++ L G+LE+A ++M +G
Sbjct: 201 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 260
Query: 498 VPEPRT 503
+P+ T
Sbjct: 261 LPDITT 266
>gi|357138018|ref|XP_003570595.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Brachypodium distachyon]
Length = 548
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 196/407 (48%), Gaps = 27/407 (6%)
Query: 110 EKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG-- 167
E AL+ LT L+ +V++R R++ + A+ FF W S++ +Y +N ++D L
Sbjct: 93 EAALDALGAELTTPLVSDVMHRLRYEEKLAFRFFAWASQQDNYEHDQAAYNEVIDTLSGT 152
Query: 168 --RARRFVELIQVFDEMPDLVNEKTYGI-------LLNRYAAAHMVEEAIGVFDRRKEFG 218
+AR+F L V D M +T + +L Y H+ RR
Sbjct: 153 RYKARQFGVLCDVLDHMK---RHRTRSVPVEDLLAILRAYTEKHLTNLRKLAKKRRVRMR 209
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKR 278
+ A LL C+ V AET F K + + +T NI+ GWC + +A +
Sbjct: 210 TPPETDALNILLDAFCKCGMVREAETVFGRVKRKLQGNAETYNILFFGWCRARDPKKAMK 269
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK---PDVVTCNCIID 335
+++I K P+S TY +++ G + A LF+ M +G P + +I
Sbjct: 270 VLEEMILMKHAPESFTYIAAIDSFCSAGLVSEAKELFEFMRTEGSSISSPTAKAYSVMIV 329
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
AL R+ + E++ +M GC+P+V+T+ LI+ +C + +++T Y L+EM +
Sbjct: 330 ALVKADRMDDCFELISDMIKLGCMPDVSTFKDLIEGMCLVDKIDTAYFVLEEMGKAGFP- 388
Query: 396 LPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+ +T+N L+ +L+K ++ + ERM C+ S TYN+++ ++ +
Sbjct: 389 -PDIVTYNCFLEVLCNLQKADDALKLCERMIEAHCEPSVHTYNMLMVMFFQMREPHRALD 447
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF-----HEMRL 494
W EM+K+G +Y +MI GL+D GR EDA + H+M+L
Sbjct: 448 IWLEMDKRGCRRAVDTYEIMIDGLFDCGRTEDATNLLDEVINHDMKL 494
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 166/315 (52%), Gaps = 12/315 (3%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
+ I + +AAA ++ A+GVF+ + G D + +F LL+ L + A F+
Sbjct: 3 AFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRM 62
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
++ + D+++ ++ WC N+ EA R W +++++ +PD V + T + L + +
Sbjct: 63 RDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRP 122
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+++F+ M KG P+V T +I C + ++ A+ EM++ GC P+V TY L+
Sbjct: 123 EAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLL 182
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNG 426
KRM+ V L+EM QK C P+ T+N L+K L P++ + ++M + G
Sbjct: 183 VGYGNAKRMDRVTALLEEMTQK--GCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKG 240
Query: 427 CKMSTDTYNVILKLYV----NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+ + TYN+++K Y N+ V WEEM +KG+ PD SYTV I+G GR
Sbjct: 241 LEPTIHTYNMMMKSYFLGGRNYMMGCAV---WEEMHRKGICPDVNSYTVFINGHIRHGRP 297
Query: 483 EDALSYFHEMRLKGM 497
E+A Y EM KGM
Sbjct: 298 EEACKYIEEMIQKGM 312
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 125/335 (37%), Gaps = 60/335 (17%)
Query: 102 SVSTKGEIEKALNQCELTLT---DD------LIVNVINRYRFDWEAAYTFFKWVSREGDY 152
S + GEI+ A+ E+ T DD ++ + + EA F + R Y
Sbjct: 10 SFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR---Y 66
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + A++ AR VE +V++EM PD+V T ++ E
Sbjct: 67 APDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNT---MIEGLLRGQRRPE 123
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKTMNIIL 264
A+ +F+ K G ++ + L+ C+ +++A FE E + G D+ T +L
Sbjct: 124 AVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFE-EMQDVGCQPDVATYTCLL 182
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ-------- 316
G+ + +++ + C PD TY + LT + A R+++
Sbjct: 183 VGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLE 242
Query: 317 ------------------------AMWE----KGRKPDVVTCNCIIDALCFKKRIPEALE 348
A+WE KG PDV + I+ R EA +
Sbjct: 243 PTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACK 302
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+ EM +G YN K + + +YE
Sbjct: 303 YIEEMIQKGMKTPQIDYNKFAADFSKAGKPDILYE 337
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 187/401 (46%), Gaps = 11/401 (2%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSRE-GDYSPGSNVFNAILDVLG 167
+ +AL + + T DL+ V+ R A FFK + R Y+ + F+ +D+
Sbjct: 56 VSEALTKPTIQWTPDLVNKVMKRLWNHGPKALQFFKHLDRHHPSYTHSPSSFDHAVDIAA 115
Query: 168 RARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
R R F + M L + KT IL RYA+ A+ F E G DL
Sbjct: 116 RMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLH 175
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+F LL LC+ K VE A + ++ + F D T NI+ NG+C++ A R K+++
Sbjct: 176 SFNTLLDILCKSKRVETAHSLLKTLTSRFRPDTVTYNILANGYCLIKRTPMALRVLKEMV 235
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+ EP VTY T + + ++ A + M ++ + DVVT +I +
Sbjct: 236 QRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVK 295
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A V EM G +PNV TYN+LI+ LCK +E +EM + G C+PN +T+N
Sbjct: 296 KAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEM-AREGVCVPNVVTYNV 354
Query: 405 LLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
+++ L E +ERM +G + TYNV+++ + + +K + +M
Sbjct: 355 VIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGS 414
Query: 462 MGPDQRSYTVMIHGLYDKGRLED---ALSYFHEMRLKGMVP 499
P+ +Y V+I ++ + + ED A +M +G +P
Sbjct: 415 CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLP 455
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A+ M G ++ ++N+L+ LCK KR+ET + L + + P+ +T+N L
Sbjct: 158 AVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSR---FRPDTVTYNIL 214
Query: 406 LKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE---EMEK 459
+K+ VL+ M + G + + TYN +LK Y ++++ WE EM+K
Sbjct: 215 ANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFR---SNQIKEAWEFYLEMKK 271
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ D +YT +IHG G ++ A FHEM +G+VP T
Sbjct: 272 RKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVAT 315
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 10/228 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P +N +L R+ + E + + EM ++ TY +++ + A V++A V
Sbjct: 241 PTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRV 300
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY---DIKTMNIILNGW 267
F + G + +++ + L+ LC+ VE A FE E G ++ T N+++ G
Sbjct: 301 FHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMARE-GVCVPNVVTYNVVIRGL 359
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C +G++ A F + + + TY + G++ AL +F M + P++
Sbjct: 360 CHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNL 419
Query: 328 VTCNCIIDALCFKKRIPE---ALEVLREMKNRGCLPNVTTYNSLIKHL 372
T N +I A+ +K+ + A ++L +M +RG LP T+N ++ L
Sbjct: 420 DTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNRVLNGL 467
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 174/351 (49%), Gaps = 17/351 (4%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
V+N +L+VL + L V+ EM PD+V T+ L+ AH V A+ +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVV---TFNTLMKALCRAHQVRTAVLML 204
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK--TMNIILNGWCV 269
+ G D + F L+ +E A ++ E G T+N+++NG+C
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAA-LRVKARMLEMGCSATKVTVNVLINGYCK 263
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
LG V +A + + I EPD +TY TFVN L + +G AL++ M ++G PDV T
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +++ LC ++ EA +L +M +RGCLP++TT+N+LI LC R+E + ++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 390 QKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
K S P+ TFN L+ +L K P + E M+ +GC TYN ++ +
Sbjct: 384 VKGVS--PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
K ++ME G +Y +I GL K R+E+A F +M L+G+
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 174/362 (48%), Gaps = 15/362 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P +N ++ L + ++V D M PD+ TY I++N +E
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF---TYNIVVNCLCKNGQLE 338
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
EA G+ ++ + G L D++ F L+ LC +E A + + D+ T NI++
Sbjct: 339 EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 398
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N C +G+ + A R ++++ S C PD VTY T ++ L GKLG AL L + M G
Sbjct: 399 NALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCP 458
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
+T N IID LC K RI EA EV +M +G N T+N+LI LCK K+++ +E
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 518
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLY 441
+++M + PN IT+N +L K ++ +LE M NG ++ TY ++
Sbjct: 519 INQMISE--GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
M KGM P ++Y ++ L+ + + DALS F EM G P+
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636
Query: 502 RT 503
T
Sbjct: 637 LT 638
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 122/246 (49%), Gaps = 22/246 (8%)
Query: 274 YEAKRFWKD---IIKSKCEP------DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
YE ++ + D +I ++ +P D+V Y +N L + K+ ++ M +G K
Sbjct: 119 YEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIK 178
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDVVT N ++ ALC ++ A+ +L EM +RG P+ TT+ +L++ + +E
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238
Query: 385 LDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
M + C ++T N L+ L + E+ +++ +G + TYN +
Sbjct: 239 KARMLEM--GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT----F 292
Query: 442 VNWDCE-DKVRHTWEEME---KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
VN C+ D V H + M+ ++G PD +Y ++++ L G+LE+A ++M +G
Sbjct: 293 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352
Query: 498 VPEPRT 503
+P+ T
Sbjct: 353 LPDITT 358
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 174/351 (49%), Gaps = 17/351 (4%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
V+N +L+VL + L V+ EM PD+V T+ L+ AH V A+ +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVV---TFNTLMKALCRAHQVRTAVIML 204
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK--TMNIILNGWCV 269
+ G D + F L+ +E A ++ E G T+N+++NG+C
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAA-LRVKARMLEMGCSATKVTVNVLINGYCK 263
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
LG V +A + + I EPD +TY TFVN L + +G AL++ M ++G PDV T
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +++ LC ++ EA +L +M +RGCLP++TT+N+LI LC R+E + ++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 390 QKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
K S P+ TFN L+ +L K P + E M+ +GC TYN ++ +
Sbjct: 384 VKGVS--PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
K ++ME G +Y +I GL K R+E+A F +M L+G+
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 174/362 (48%), Gaps = 15/362 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P +N ++ L + ++V D M PD+ TY I++N +E
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF---TYNIVVNCLCKNGQLE 338
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
EA G+ ++ + G L D++ F L+ LC +E A + + D+ T NI++
Sbjct: 339 EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 398
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N C +G+ + A R ++++ S C PD VTY T ++ L GKLG AL L + M G
Sbjct: 399 NALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCP 458
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
+T N IID LC K RI EA EV +M +G N T+N+LI LCK K+++ +E
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 518
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLY 441
+++M + PN IT+N +L K ++ +LE M NG ++ TY ++
Sbjct: 519 INQMISE--GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
M KGM P ++Y ++ L+ + + DALS F EM G P+
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636
Query: 502 RT 503
T
Sbjct: 637 LT 638
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 122/246 (49%), Gaps = 22/246 (8%)
Query: 274 YEAKRFWKD---IIKSKCEP------DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
YE ++ + D +I ++ +P D+V Y +N L + K+ ++ M +G K
Sbjct: 119 YEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIK 178
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDVVT N ++ ALC ++ A+ +L EM +RG P+ TT+ +L++ + +E
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238
Query: 385 LDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
M + C ++T N L+ L + E+ +++ +G + TYN +
Sbjct: 239 KARMLEM--GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT----F 292
Query: 442 VNWDCE-DKVRHTWEEME---KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
VN C+ D V H + M+ ++G PD +Y ++++ L G+LE+A ++M +G
Sbjct: 293 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352
Query: 498 VPEPRT 503
+P+ T
Sbjct: 353 LPDITT 358
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 174/351 (49%), Gaps = 17/351 (4%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
V+N +L+VL + L V+ EM PD+V T+ L+ AH V A+ +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVV---TFNTLMKALCRAHQVRTAVLML 204
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK--TMNIILNGWCV 269
+ G D + F L+ +E A ++ E G T+N+++NG+C
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAA-LRVKARMLEMGCSATKVTVNVLINGYCK 263
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
LG V +A + + I EPD +TY TFVN L + +G AL++ M ++G PDV T
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +++ LC ++ EA +L +M +RGCLP++TT+N+LI LC R+E + ++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 390 QKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
K S P+ TFN L+ +L K P + E M+ +GC TYN ++ +
Sbjct: 384 VKGVS--PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
K ++ME G +Y +I GL K R+E+A F +M L+G+
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 173/362 (47%), Gaps = 15/362 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P +N ++ L + ++V D M PD+ TY I++N +E
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF---TYNIVVNCLCKNGQLE 338
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
EA G+ ++ + G L D++ F L+ LC +E A + + D+ T NI++
Sbjct: 339 EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 398
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N C +G+ + A R ++++ S C PD VTY T ++ L GKLG AL L + M G
Sbjct: 399 NALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCP 458
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
+T N IID LC K RI EA EV +M +G N T+N+LI LCK K+++ +
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGL 518
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLY 441
+++M + PN IT+N +L K ++ +LE M NG ++ TY ++
Sbjct: 519 INQMISE--GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
M KGM P ++Y ++ L+ + + DALS F EM G P+
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636
Query: 502 RT 503
T
Sbjct: 637 LT 638
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 122/246 (49%), Gaps = 22/246 (8%)
Query: 274 YEAKRFWKD---IIKSKCEP------DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
YE ++ + D +I ++ +P D+V Y +N L + K+ ++ M +G K
Sbjct: 119 YEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIK 178
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDVVT N ++ ALC ++ A+ +L EM +RG P+ TT+ +L++ + +E
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238
Query: 385 LDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
M + C ++T N L+ L + E+ +++ +G + TYN +
Sbjct: 239 KARMLEM--GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT----F 292
Query: 442 VNWDCE-DKVRHTWEEME---KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
VN C+ D V H + M+ ++G PD +Y ++++ L G+LE+A ++M +G
Sbjct: 293 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352
Query: 498 VPEPRT 503
+P+ T
Sbjct: 353 LPDITT 358
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 188/368 (51%), Gaps = 8/368 (2%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VN 187
R+ + A FF W + + +N ++D+ G+ ++F + D M +
Sbjct: 123 RHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEIT 182
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
T+ +L+ RY A + EA+ F+R +++G D+ AF N++ LC+ + A++FF+
Sbjct: 183 VVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFD 242
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ K++F D+ +++GWC G++ EA+ ++++ + P+ TY+ ++AL + G+
Sbjct: 243 NLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQ 302
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A +F M + G P+ VT N +I R + L+V +MK C ++ TYN
Sbjct: 303 ITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNF 362
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMER 424
LI+ CK + + L+ M + + C PN +FN + + + K ++V + RM+
Sbjct: 363 LIETHCKDDNLGEAIKVLNSMAKND--CTPNASSFNPIFRCIAKSQDVNGAHRMFARMKE 420
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
GCK +T TYN++++++ D + +EM+++ + P+ +Y +I G
Sbjct: 421 VGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNH 480
Query: 485 ALSYFHEM 492
A +F EM
Sbjct: 481 AYMFFREM 488
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 6/250 (2%)
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ T ++++ + G EA + + C D + ++ ++ L KK + A F
Sbjct: 183 VVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFD 242
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
+ K +PDV+ ++ C I EA V REMK G PNV TY+ +I LC+
Sbjct: 243 NLKHKF-EPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSG 301
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDT 433
++ ++ EM + C PN +TFN L++ + E+V V +M+R C T
Sbjct: 302 QITRAHDVFAEM--LDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLIT 359
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
YN +++ + D + M K P+ S+ + + + A F M+
Sbjct: 360 YNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMK 419
Query: 494 LKGMVPEPRT 503
G P T
Sbjct: 420 EVGCKPNTVT 429
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 13/225 (5%)
Query: 282 DIIKSK-CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
D++K++ E VT++ V + G A+ F M + G D++ + +I LC K
Sbjct: 172 DLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKK 231
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK---IKRMETVYEYLDEMEQKNGSCLP 397
+R EA +K++ P+V Y SL+ C+ I E+V+ E K P
Sbjct: 232 RRAVEAQSFFDNLKHK-FEPDVIVYTSLVHGWCRAGDISEAESVFR-----EMKMAGISP 285
Query: 398 NEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N T++ ++ +L + ++ V M GC ++ T+N ++++++ +KV +
Sbjct: 286 NVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVY 345
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+M++ D +Y +I L +A+ + M P
Sbjct: 346 NQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTP 390
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 111/262 (42%), Gaps = 6/262 (2%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTY 191
D A + F+ + G SP ++ ++D L R+ + VF EM D N T+
Sbjct: 267 DISEAESVFREMKMAG-ISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTF 325
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEK 250
L+ + A E+ + V+++ K DL + L+ C+ ++ E + K
Sbjct: 326 NNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAK 385
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
N+ + + N I +V A R + + + C+P++VTY +
Sbjct: 386 NDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADM 445
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL-PNVTTYNSLI 369
+L + M E+ +P+ T +I C A REM + C+ P++ Y ++
Sbjct: 446 IFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVL 505
Query: 370 KHLCKIKRMETVYEYLDEMEQK 391
+ L K +++ E +D+M ++
Sbjct: 506 EELRKAGQLKKHEELVDKMVER 527
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLER 421
YN +I K+K+ + +D M+ +N +TF+ L++ + E R
Sbjct: 151 YNEMIDLAGKVKQFGLAWYLIDLMKARNVEI--TVVTFSMLVRRYVRAGLAAEAVHAFNR 208
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
ME GC ++ ++ + + + ++ ++ K PD YT ++HG G
Sbjct: 209 MEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHK-FEPDVIVYTSLVHGWCRAGD 267
Query: 482 LEDALSYFHEMRLKGMVPEPRTGILVND 509
+ +A S F EM++ G+ P T +V D
Sbjct: 268 ISEAESVFREMKMAGISPNVYTYSIVID 295
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 199/420 (47%), Gaps = 11/420 (2%)
Query: 72 SLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINR 131
SL S + + P D AI ++ + +T + + L+ T +L+ +V+ R
Sbjct: 8 SLCTSAAGANLKPPPADSAAI--AKLILSSPNTTHQDDQFLLSTKTTPWTPNLVNSVLKR 65
Query: 132 YRFDWEAAYTFFKWV-SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VN 187
A FF ++ + +Y ++ F+ +D+ R + + M L +
Sbjct: 66 LWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPS 125
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
KT+ I+ RYA+A ++A+ +F E G DL++F +L LC+ K VE A F
Sbjct: 126 PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 185
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ + F D T N+ILNGWC++ +A K++++ P+ TY T + + G+
Sbjct: 186 ALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A F M ++ + DVVT ++ I A V EM G LP+V TYN+
Sbjct: 246 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNA 305
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMER 424
+I+ LCK +E +EM ++ PN T+N L++ L E +++RME
Sbjct: 306 MIQVLCKKDNVENAVVMFEEMVRRGYE--PNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
GC+ + TYN++++ Y +K +E+M P+ +Y ++I G++ + R ED
Sbjct: 364 EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 127/254 (50%), Gaps = 8/254 (3%)
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
G KT I+ + G +A + + ++ + C D ++ T ++ L K ++ A
Sbjct: 123 GPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYE 182
Query: 314 LFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
LF+A+ +GR D VT N I++ C KR P+ALEVL+EM RG PN+TTYN+++K
Sbjct: 183 LFRAL--RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGF 240
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKM 429
+ ++ +E+ EM++++ C + +T+ ++ E+ V + M R G
Sbjct: 241 FRAGQIRHAWEFFLEMKKRD--CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLP 298
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
S TYN ++++ D + +EEM ++G P+ +Y V+I GL+ G
Sbjct: 299 SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELM 358
Query: 490 HEMRLKGMVPEPRT 503
M +G P +T
Sbjct: 359 QRMENEGCEPNFQT 372
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 208/424 (49%), Gaps = 18/424 (4%)
Query: 86 PGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRF---DWEAAYTF 142
P D++ V IL T S+ ++++L ++ L+++LI V+ R RF + F
Sbjct: 24 PNDDVH-KVYTILTT--TSSPETLKQSLKSTQIFLSNELIDQVLKRVRFGHANPNQTLEF 80
Query: 143 FKWVSREGDYSPGSNVFNAILDVLGRARRFVE----LIQVFDEMPDLVNEKTYGILLNRY 198
F++ R + + + +L +LGR+R F LI+ + +++ +T ++L R
Sbjct: 81 FRYTGRRKGFYHTAYSLDTMLYILGRSRMFDHVWELLIEARRKDQNVITPRTVMVVLGRV 140
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK 258
A V + + F + K+ ++ F LL LC+ K + A + S K+ F +++
Sbjct: 141 AKVCSVRQTVETFRKFKKIVPDYGVNCFNALLRTLCQEKSMTDARNVYHSLKHNFRPNLQ 200
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T NI+L+GW NV +A+ F ++ + EPD VTY + V+ K ++ A ++F M
Sbjct: 201 TFNILLSGW---KNVEDAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEM 257
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
EK PDV+T +I L + +A +VL+EMK G P+V YN+ I++ C KR+
Sbjct: 258 REKDLSPDVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRL 317
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PWVL-ERMERNGCKMSTDTYN 435
+E +DEM K S PN T+N + ++ W L +RM GC T +
Sbjct: 318 GIAFELVDEMVNKGLS--PNATTYNLFFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSCM 375
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+++L+ + + W EM +KG G V+ L D G+L +A F EM K
Sbjct: 376 FLIRLFKRHEKMEMALQLWGEMVEKGFGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEK 435
Query: 496 GMVP 499
G P
Sbjct: 436 GQRP 439
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 13/233 (5%)
Query: 313 RLFQAMWE---KGRKPD--VVTCNCIIDALCFKKRI---PEALEVLREMKNRGCLPNVTT 364
R+F +WE + R+ D V+T ++ L ++ + +E R+ K V
Sbjct: 108 RMFDHVWELLIEARRKDQNVITPRTVMVVLGRVAKVCSVRQTVETFRKFKKIVPDYGVNC 167
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER 424
+N+L++ LC+ K M ++ + PN TFN LL K E+ + M+
Sbjct: 168 FNALLRTLCQEKSMTDARNVYHSLKH---NFRPNLQTFNILLSGWKNVEDAELFVNEMKE 224
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G + TYN ++ +Y +K ++EM +K + PD +YT +I GL G+ +
Sbjct: 225 MGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVIGGLGLVGQPDK 284
Query: 485 ALSYFHEMRLKGMVPE-PRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
A EM+ G+ P+ P + + I K G + V ++ + GL NA
Sbjct: 285 ARDVLKEMKEYGVYPDVPAYNAAIRNYCIA-KRLGIAFELVDEMVNKGLSPNA 336
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 97/228 (42%), Gaps = 10/228 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
+E P +N+++DV + R + +VFDEM PD++ TY ++
Sbjct: 223 KEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVI---TYTSVIGGLGLV 279
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTM 260
++A V KE+G D+ A+ + C K + +A + N+ + T
Sbjct: 280 GQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGLSPNATTY 339
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N+ + ++ + +K ++ C P + + + + K+ AL+L+ M E
Sbjct: 340 NLFFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSCMFLIRLFKRHEKMEMALQLWGEMVE 399
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
KG + + + D LC ++ EA + EM +G P+ ++ +
Sbjct: 400 KGFGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEKGQRPSNVSFKRI 447
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 196/404 (48%), Gaps = 11/404 (2%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+ ++L+ + T L+ ++ R A FFK +S Y ++ F+ +D+ R
Sbjct: 45 LAESLHSPSIQWTPQLVNTILKRLWNHGPKALHFFKILSHHPSYCHQASSFDHAIDICAR 104
Query: 169 ARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
R F L + M + +T+ I+ RYAA A+ VF E+G DLS+
Sbjct: 105 LRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSS 164
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
F +L LC+ K VE+A F++ K +F D + NII+NGWC++ +A K++++
Sbjct: 165 FNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVE 224
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
P+ TY +N + G+ A F M ++ DVVT +I L I
Sbjct: 225 RGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKR 284
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A V +M G LP+V T+N+LI+ LCK +E +EM ++ +PN IT+N +
Sbjct: 285 ARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKR--GYVPNSITYNLV 342
Query: 406 LKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
++ L E+ ++ERME + C+ + TYN++++ + + +K +++M
Sbjct: 343 IRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDC 402
Query: 463 GPDQRSYTVMIHGLYDKGRLEDAL---SYFHEMRLKGMVPEPRT 503
P+ +Y ++I+ ++ + ++ L EM +G +P T
Sbjct: 403 LPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLT 446
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 10/223 (4%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P T+A GK A+ +F +M E G D+ + N I+D LC KR+ A +
Sbjct: 125 PSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNL 184
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL--- 406
+ +K + + +YN ++ C IKR E L EM ++ + PN T+N +L
Sbjct: 185 FKALKGK-FKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLT--PNLTTYNIMLNGY 241
Query: 407 -KSLKKPEEVPWVLERMERNGCKMSTDTY-NVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
++ + E + LE M++ C + TY +VI L V + + + R+ + +M K G+ P
Sbjct: 242 FRAGQTNEAWGFFLE-MKKRKCDIDVVTYTSVIHGLGVVGEIK-RARNVFNQMVKDGVLP 299
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
++ +I L K +E+A+ F EM +G VP T LV
Sbjct: 300 SVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLV 342
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 9/232 (3%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E +P +N +L+ RA + E F EM ++ TY +++ ++
Sbjct: 224 ERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIK 283
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNII 263
A VF++ + G L ++ F L+ LC+ VE A FE E + GY + T N++
Sbjct: 284 RARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFE-EMVKRGYVPNSITYNLV 342
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G C +G + A + + CEP+ TY + G++ L LFQ M
Sbjct: 343 IRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDC 402
Query: 324 KPDVVTCNCIIDALCFKKRIPEAL---EVLREMKNRGCLPNVTTYNSLIKHL 372
P++ T N +I+++ +K L ++L EM +RG LP T+N ++ L
Sbjct: 403 LPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGL 454
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 174/357 (48%), Gaps = 12/357 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++ +A + V D M PD+V TY +L + +++A+ V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVV---TYNTILRSLCDSGKLKQAMEV 226
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
DR + D+ + L+ CR V A + ++ D+ T N+++NG C
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA +F D+ S C+P+ +T+ + ++ G+ A +L M KG P VVT
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I+ LC K + A+++L +M GC PN +YN L+ CK K+M+ EYL+ M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ C P+ +T+N +L +L K E+ +L ++ GC TYN ++
Sbjct: 407 SR--GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K +EM K + PD +Y+ ++ GL +G++++A+ +FHE G+ P T
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 171/365 (46%), Gaps = 51/365 (13%)
Query: 166 LGRARRFVELIQVFD---EMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
LG+ R+ +++++ + +PD++ TY ++++ Y A + A+ V DR
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVI---TYNVMISGYCKAGEINNALSVLDRM-------- 198
Query: 223 LSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
D+ T N IL C G + +A
Sbjct: 199 -----------------------------SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+++ C PD +TY + A + +G A++L M ++G PDVVT N +++ +C + R
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ EA++ L +M + GC PNV T+N +++ +C R + L +M +K S P+ +TF
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS--PSVVTF 347
Query: 403 NYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
N L+ L + + +LE+M ++GC+ ++ +YN +L + D+ E M
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
+G PD +Y M+ L G++EDA+ +++ KG P I N + L + G+
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP---VLITYNTVIDGLAKAGK 464
Query: 520 QGKKV 524
GK +
Sbjct: 465 TGKAI 469
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 178/391 (45%), Gaps = 50/391 (12%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N IL L + + + ++V D M PD++ TY IL+ V
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI---TYTILIEATCRDSGVGH 257
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
A+ + D ++ G D+ + L+ +C+ ++ A F + + ++ T NIIL
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G +A++ D+++ P VT+ +N L +KG LG A+ + + M + G +P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ ++ N ++ C +K++ A+E L M +RGC P++ TYN+++ LCK ++E E L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKK--------------------PEEVPW-------- 417
+++ K C P IT+N ++ L K P+ + +
Sbjct: 438 NQLSSK--GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 418 ----------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
ER G + + T+N I+ D+ M +G P++
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
SYT++I GL +G ++AL +E+ KG++
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 5/261 (1%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
W A + R+G +SP FN +++ L R I + ++MP N +Y
Sbjct: 325 WMDAEKLLADMLRKG-FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
LL+ + ++ AI +R G D+ + +L LC+ VE A E +
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N +++G G +A + ++ +PD++TY++ V L+++GK+ A
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++ F G +P+ VT N I+ LC ++ A++ L M NRGC PN T+Y LI+
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 372 LCKIKRMETVYEYLDEMEQKN 392
L + E L+E+ K
Sbjct: 564 LAYEGMAKEALELLNELCNKG 584
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 17/246 (6%)
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G + E +F ++++ PD + T + + GK A ++ + + G PDV+T
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +I C I AL VL M P+V TYN++++ LC +++ E LD M Q
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCE 447
++ C P+ IT+ L+++ + V +L+ M GC TYNV+ VN C+
Sbjct: 233 RD--CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL----VNGICK 286
Query: 448 ----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ +M G P+ ++ +++ + GR DA +M KG P T
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 504 -GILVN 508
IL+N
Sbjct: 347 FNILIN 352
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+ + G+L + + M G PD++ C +I C + +A ++L ++ G +P+
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V TYN +I CK + LD M S P+ +T+N +L+SL K ++ V
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM-----SVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDK-VRHTW---EEMEKKGMGPDQRSYTVMIH 474
L+RM + C TY ++++ C D V H +EM +G PD +Y V+++
Sbjct: 227 LDRMLQRDCYPDVITYTILIE----ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVP 499
G+ +GRL++A+ + ++M G P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQP 307
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 174/357 (48%), Gaps = 12/357 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++ +A + V D M PD+V TY +L + +++A+ V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVV---TYNTILRSLCDSGKLKQAMEV 226
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
DR + D+ + L+ CR V A + ++ D+ T N+++NG C
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA +F D+ S C+P+ +T+ + ++ G+ A +L M KG P VVT
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I+ LC K + A+++L +M GC PN +YN L+ CK K+M+ EYL+ M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ C P+ +T+N +L +L K E+ +L ++ GC TYN ++
Sbjct: 407 SR--GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K +EM K + PD +Y+ ++ GL +G++++A+ +FHE G+ P T
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVT 521
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 174/357 (48%), Gaps = 13/357 (3%)
Query: 171 RFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+F+E + +PD++ T L+ + +A + + + G + D+ + ++
Sbjct: 123 KFLENMVYHGNVPDIIPCTT---LIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMI 179
Query: 231 LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
C+ + A + + + D+ T N IL C G + +A +++ C P
Sbjct: 180 SGYCKAGEINNALSVLD--RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D +TY + A + +G A++L M ++G PDVVT N +++ +C + R+ EA++ L
Sbjct: 238 DVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
+M + GC PNV T+N +++ +C R + L +M +K S P+ +TFN L+ L
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS--PSVVTFNILINFLC 355
Query: 411 KPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+ + +LE+M ++GC+ ++ +YN +L + D+ E M +G PD
Sbjct: 356 RKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKV 524
+Y M+ L G++EDA+ +++ KG P I N + L + G+ GK +
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSP---VLITYNTVIDGLAKAGKTGKAI 469
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 178/391 (45%), Gaps = 50/391 (12%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N IL L + + + ++V D M PD++ TY IL+ V +
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI---TYTILIEATCRDSGVGQ 257
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
A+ + D ++ G D+ + L+ +C+ ++ A F + + ++ T NIIL
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G +A++ D+++ P VT+ +N L +KG LG A+ + + M + G +P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQP 377
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ ++ N ++ C +K++ A+E L M +RGC P++ TYN+++ LCK ++E E L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKK--------------------PEEVPW-------- 417
+++ K C P IT+N ++ L K P+ + +
Sbjct: 438 NQLSSK--GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 418 ----------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
ER G + + T+N I+ D+ M +G P +
Sbjct: 496 REGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTET 555
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
SYT++I GL +G ++AL +E+ KG++
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 5/261 (1%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
W A + R+G +SP FN +++ L R I + ++MP N +Y
Sbjct: 325 WMDAEKLLADMLRKG-FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYN 383
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
LL+ + ++ AI +R G D+ + +L LC+ VE A E +
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N +++G G +A + ++ +PD++TY++ V L+++GK+ A
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++ F G +P+ VT N I+ LC ++ A++ L M NRGC P T+Y LI+
Sbjct: 504 IKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEG 563
Query: 372 LCKIKRMETVYEYLDEMEQKN 392
L + E L+E+ K
Sbjct: 564 LAYEGMAKEALELLNELCNKG 584
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 151/354 (42%), Gaps = 39/354 (11%)
Query: 163 LDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
LDV GR R + ++P ++ +L+ +AA VE + G+ R ++F L
Sbjct: 30 LDVSGRTTR-----SISSKVPLWSRKRNRLVLV---SAASQVESS-GLNGRAQKFDTLAS 80
Query: 223 LSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ N F S + F + N L G + E +F ++
Sbjct: 81 GHSNSN-------------GNGHFSSANSSFVLEDVESNNHLRQLVRTGELEEGFKFLEN 127
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
++ PD + T + + GK A ++ + + G PDV+T N +I C
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGE 187
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
I AL VL M P+V TYN++++ LC +++ E LD M Q++ C P+ IT+
Sbjct: 188 INNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD--CYPDVITY 242
Query: 403 NYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCE----DKVRHTWE 455
L+++ + V +L+ M GC TYNV+ VN C+ D+
Sbjct: 243 TILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVL----VNGICKEGRLDEAIKFLN 298
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
+M G P+ ++ +++ + GR DA +M KG P T IL+N
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 181/362 (50%), Gaps = 21/362 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + + +L L + R+ E+ ++ EM PD E T+ ++ +V+ A
Sbjct: 354 PDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD---EVTFNTIVTSLCQQGLVDRA 410
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILN 265
I V D E G + D+ + ++L LC V+ A K+ +G T+ +L
Sbjct: 411 IEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKS-YGCKPDTIAYTTVLK 469
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C A+ +++ S C PD VT+ T V +L +KG + A+R+ + M E G P
Sbjct: 470 GLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSP 529
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+VT NCIID LC + I +A+E+L ++++ GC P++ T+N+L+K LC + R E + +
Sbjct: 530 DIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLM 589
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER---MERNGCKMSTDTYNVILKLYV 442
M + N C P+E+TFN ++ SL + + +E M NGC ++ TY++++ +
Sbjct: 590 ANMMRSN--CPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALL 647
Query: 443 NWDCEDKVRHTWEEMEKKGMG-PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
K + E + G PD +Y +I L G++E+AL M G+ P+
Sbjct: 648 K---AGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDT 704
Query: 502 RT 503
T
Sbjct: 705 TT 706
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 155/354 (43%), Gaps = 30/354 (8%)
Query: 167 GRARRFVELIQ---------VFDEM--------PDLVNEKTYGILLNRYAAAHMVEEAIG 209
G RR L+Q +FD M P +V IL+ R + V +A
Sbjct: 152 GAKRRLRSLVQRGEIDEALVLFDSMASGGGRNCPPVV---PCNILIKRLCSDGRVSDAER 208
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCV 269
VF G + + ++ CR +E A F D T N ++ CV
Sbjct: 209 VF---AALGPSATVVTYNTMVNGYCRAGRIEDARRLINGMP--FPPDTFTFNPLIRALCV 263
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + +A + D++ C P VTY+ ++A K+ A+ L M KG +PD+VT
Sbjct: 264 RGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVT 323
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I+A+C + + EAL +L + + GC P+ TY ++K LC +R + V E L EM
Sbjct: 324 YNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMT 383
Query: 390 QKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
N C P+E+TFN ++ SL + + V++ M +GC TY+ IL +
Sbjct: 384 SNN--CAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGR 441
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D ++ G PD +YT ++ GL + E A EM P+
Sbjct: 442 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPD 495
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 171/407 (42%), Gaps = 50/407 (12%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P + FN ++ L R + + VFD+M P +V TY ILL+
Sbjct: 247 FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVV---TYSILLDATCKESGYR 303
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIIL 264
+A+ + D + G D+ + L+ +C V+ A + + D T +L
Sbjct: 304 QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVL 363
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C E + ++ + C PD VT+ T V +L ++G + A+ + M E G
Sbjct: 364 KSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCV 423
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
D+VT + I+D LC R+ +A+E+L +K+ GC P+ Y +++K LC ++ E E
Sbjct: 424 ADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEEL 483
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKK--------------------PEEVPW------- 417
+ EM + C P+E+TFN ++ SL + P+ V +
Sbjct: 484 MAEMLCSD--CPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGL 541
Query: 418 -----------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
+L ++ GCK T+N +LK D + M + PD+
Sbjct: 542 CNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDE 601
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
++ +I L KG L A+ M G VP T +V D +K
Sbjct: 602 LTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLK 648
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 172/422 (40%), Gaps = 46/422 (10%)
Query: 153 SPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIG 209
+P FN I+ L G R +E++ E + + TY +L+ V++A+
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF----------------------- 246
+ R K +G D A+ +L LC + E AE
Sbjct: 448 LLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLC 507
Query: 247 -------------ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ +N DI T N I++G C + +A D+ C+PD V
Sbjct: 508 QKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIV 567
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ T + L + A +L M PD +T N +I +LC K + +A+E L+ M
Sbjct: 568 TFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIM 627
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP- 412
GC+PN +TY+ ++ L K + + E L M NG+ P+ IT+N ++ +L K
Sbjct: 628 AENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM--TNGT--PDLITYNTVISNLTKAG 683
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
EE +L M NG T TY + D D+ ++ G+ PD Y
Sbjct: 684 KMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYN 743
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSL 530
++ G R + A+ F M G +P+ T +++ + E + + L SL
Sbjct: 744 DVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSL 803
Query: 531 GL 532
G+
Sbjct: 804 GV 805
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 301 ALTKKGKLGTALRLFQAMWEKGRK--PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
+L ++G++ AL LF +M G + P VV CN +I LC R+ +A V + G
Sbjct: 159 SLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL---GP 215
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP-- 416
V TYN+++ C+ R+E ++ M P+ TFN L+++L +P
Sbjct: 216 SATVVTYNTMVNGYCRAGRIEDARRLINGMPFP-----PDTFTFNPLIRALCVRGRIPDA 270
Query: 417 -WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
V + M GC S TY+++L + +EM KG PD +Y V+I+
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ ++G +++AL+ + G P+ T
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVT 358
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 122/299 (40%), Gaps = 45/299 (15%)
Query: 151 DYSPGSNVFNAILDVL------GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMV 204
D P FN ++ L RA R VE + PD+V TY +++ +
Sbjct: 491 DCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIV---TYNCIIDGLCNESCI 547
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNII 263
++A+ + + G D+ F LL LC E AE + ++ D T N +
Sbjct: 548 DDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTV 607
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDS------------------------------- 292
+ C G + +A K + ++ C P+S
Sbjct: 608 ITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTP 667
Query: 293 --VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+TY T ++ LTK GK+ AL L + M G PD T + +C + A+ +L
Sbjct: 668 DLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRML 727
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
R +++ G P+ T YN ++ C+ +R + + M + C+P+E T+ LL++L
Sbjct: 728 RRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHM--VSSGCMPDESTYVILLEAL 784
>gi|356499253|ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Glycine max]
Length = 510
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 188/409 (45%), Gaps = 21/409 (5%)
Query: 110 EKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRA 169
E L +TLT L+ + + R + + A + F + + + F ++D + +
Sbjct: 55 ESPLQLHGITLTPTLLFHTLLRLKNHSKIALSLFHYAKTLPNPPLSHSSFTLLIDTMAKV 114
Query: 170 RRFV---ELIQVFDEMPDLV-NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
R+F +LI D+ L T+ L+ R A + +A+ F F E
Sbjct: 115 RQFDVAWQLIVEMDQRHHLTPTPSTFLTLIRRLICAGLTRQAVRAFHDIDAFSETKTTPQ 174
Query: 226 -FQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
F LL LC+Y HV +A F K+ F +K +++ GWC +G + A+ F ++I
Sbjct: 175 DFCVLLDTLCKYGHVRLAVEVFNKNKHTFPPTVKMYTVLIYGWCKIGRIKTAQSFLNEMI 234
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALR----------LFQAMWEKGRKPDVVTCNCII 334
EP+ VTY +N + +K L R +F M E G +PDV + + ++
Sbjct: 235 DKGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQMRESGIEPDVTSFSILL 294
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ L+ L MK +G PNV Y S+IK L +E L EM + S
Sbjct: 295 HVYSRAHKPQLVLDKLSLMKEKGICPNVVMYTSVIKCLASCGWLEDAERLLGEMVRDGVS 354
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERMERNG-CKMSTDTYNVILKLYVNWDCEDKV 450
P T+N K K E + +RM+ +G C S+ TY +++++++ D V
Sbjct: 355 --PCAATYNCFFKEFRGRKDGESALRMFKRMKEDGLCMPSSHTYVILIRMFLRLDMIKVV 412
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ W++M++ G GPD YTV+IHGL ++ R +A YF EM G +P
Sbjct: 413 KEIWQDMKETGAGPDLDLYTVLIHGLCERQRWREACHYFVEMIENGFLP 461
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 14/229 (6%)
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+VFD+M PD+ ++ ILL+ Y+ AH + + KE G ++ + +++
Sbjct: 273 EVFDQMRESGIEPDVT---SFSILLHVYSRAHKPQLVLDKLSLMKEKGICPNVVMYTSVI 329
Query: 231 LWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-C 288
L +E AE E ++ T N + + A R +K + + C
Sbjct: 330 KCLASCGWLEDAERLLGEMVRDGVSPCAATYNCFFKEFRGRKDGESALRMFKRMKEDGLC 389
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
P S TY + + + ++Q M E G PD+ +I LC ++R EA
Sbjct: 390 MPSSHTYVILIRMFLRLDMIKVVKEIWQDMKETGAGPDLDLYTVLIHGLCERQRWREACH 449
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMET---VYEYLDEMEQKNGS 394
EM G LP T+ SL + L + + T + + LDE GS
Sbjct: 450 YFVEMIENGFLPLKGTFESLYRGLIQADMLRTWRRLKKKLDEESITFGS 498
>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 212/422 (50%), Gaps = 24/422 (5%)
Query: 93 NVQNILKTCSVSTKG-EIEKALNQCELTLTDDLIVNVINRYRFDWE---AAYTFFKWVSR 148
N++ + + + S+ +++ +L + L+++LI V+ R RF A FF + ++
Sbjct: 41 NIETVFRIITTSSSSTDMKHSLESSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTAK 100
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAAHMV 204
+ S + +L +LGR+R+F ++ V ++ P L++ +T ++L R A V
Sbjct: 101 RRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLGRIAKVCSV 160
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
+ + F + K+F D++ F LL LC+ K + A + K+ F +++T NI+L
Sbjct: 161 RQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPNLQTFNILL 220
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+GW + EA+ F+ ++I+ +PD V+Y V+ K ++ A ++ M ++
Sbjct: 221 SGW---KSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIP 277
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
DV+T II L + +A +L+EMK GC P+V YN+ I++ C KR+ ++
Sbjct: 278 ADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDL 337
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL--KKPEEVPWVL-ERMERNGCKMSTDTYNVILKLY 441
LDEM K S PN T+N + + W L RM GC +T + +++L+
Sbjct: 338 LDEMVNKGLS--PNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLF 395
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY----DKGRLEDALSYFHEMRLKGM 497
++ E+ W +M +KG G SY ++ L+ D G+L +A S F +M KG
Sbjct: 396 KKYEKEEMALELWNDMIQKGFG----SYILVSEELFDLLCDLGKLIEAESCFLQMVDKGH 451
Query: 498 VP 499
P
Sbjct: 452 KP 453
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 17/199 (8%)
Query: 313 RLFQAMWE-----KGRKPDVVTCNCIIDALCFKKRI---PEALEVLREMKNRGCLPNVTT 364
R F +W+ K + P +++ ++ L ++ + +E R+ K +VT
Sbjct: 122 RKFDKIWDVLLDVKFKDPSLISLRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTC 181
Query: 365 YNSLIKHLCKIKRM---ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER 421
+N+L++ LC+ K M VY L M + PN TFN LL K EE +
Sbjct: 182 FNALLRTLCQEKSMMDARNVYHGLKSMFR------PNLQTFNILLSGWKSSEEAEGFFDE 235
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M G K +YN ++ +Y DK +M + + D +YT +I GL G+
Sbjct: 236 MIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQ 295
Query: 482 LEDALSYFHEMRLKGMVPE 500
+ A + EM+ G P+
Sbjct: 296 PDKARNILKEMKEYGCYPD 314
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 96/233 (41%), Gaps = 5/233 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
E A FF + G P +N ++DV + R + +V +M D + TY
Sbjct: 227 EEAEGFFDEMIEMG-VKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTS 285
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE- 252
++ ++A + KE+G D++A+ + C K + A + N+
Sbjct: 286 IIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKG 345
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ T N+ + ++ A ++ ++ + C P++ + V K K AL
Sbjct: 346 LSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMAL 405
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
L+ M +KG ++ + D LC ++ EA +M ++G P+ T++
Sbjct: 406 ELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSF 458
>gi|115475660|ref|NP_001061426.1| Os08g0272200 [Oryza sativa Japonica Group]
gi|37806221|dbj|BAC99723.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|37806377|dbj|BAC99889.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623395|dbj|BAF23340.1| Os08g0272200 [Oryza sativa Japonica Group]
gi|125602810|gb|EAZ42135.1| hypothetical protein OsJ_26694 [Oryza sativa Japonica Group]
Length = 528
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 196/407 (48%), Gaps = 25/407 (6%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPG------------SNVFNAILDVLGRAR 170
DL+V + R D +AA +W EG + G + ++ + G+AR
Sbjct: 99 DLLVRALWELRRDPDAAALALRW-GEEGCAAAGERAGPPPPPPPPAEAWHLTIWAAGKAR 157
Query: 171 RFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
RF V M ++ + I++ RYAAA+ V +AI FD ++F D + F +
Sbjct: 158 RFDLAWAVVRRMLRRGVLTSRAMVIVMERYAAANEVNKAIKTFDAMEKFKTEADQTVFYS 217
Query: 229 LLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC-VLGNVYEAKRFWKDIIKSK 287
LL LC+ K++E AE K F + NIIL+GWC V+ ++ EAKR W+++
Sbjct: 218 LLRALCKNKNIEDAEELLLVRKKFFPLTAEGFNIILDGWCNVITDIAEAKRIWREMSNYC 277
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
PD +Y V+ K G L LR++ M ++G P + N +I L + + +
Sbjct: 278 ITPDGTSYTLMVSCFAKVGNLFDTLRVYDEMKKRGWTPSIAVYNSLIYVLTKENCMKDVQ 337
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+ + + G PNV TYNS+I LC+ ++++ L++M K +P +T++ L+
Sbjct: 338 NIFTRIIDEGLQPNVKTYNSMIVPLCESRKLDEARMVLEDMMLKG--IVPTILTYHTFLR 395
Query: 408 SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+ +E L++M+ +GC +DT+ +++ + + W EM++ + P
Sbjct: 396 Q-ENIDETLKFLKKMKDDGCGPKSDTFLMLIDRFFQLNEPGHALKLWNEMKRYDIRPSYS 454
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP------RTGILVN 508
Y ++ GL G ++ AL Y+ EM+ G +P RT +L N
Sbjct: 455 HYMSVVQGLIKHGCMQRALEYYDEMKENGFASDPKLEKEFRTFLLAN 501
>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 212/422 (50%), Gaps = 24/422 (5%)
Query: 93 NVQNILKTCSVSTKG-EIEKALNQCELTLTDDLIVNVINRYRFDWE---AAYTFFKWVSR 148
N++ + + + S+ +++ +L + L+++LI V+ R RF A FF + ++
Sbjct: 41 NIETVFRIITTSSSSTDMKHSLESSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTAK 100
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAAHMV 204
+ S + +L +LGR+R+F ++ V ++ P L++ +T ++L R A V
Sbjct: 101 RRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLGRIAKVCSV 160
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
+ + F + K+F D++ F LL LC+ K + A + K+ F +++T NI+L
Sbjct: 161 RQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPNLQTFNILL 220
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+GW + EA+ F+ ++I+ +PD V+Y V+ K ++ A ++ M ++
Sbjct: 221 SGW---KSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIP 277
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
DV+T II L + +A +L+EMK GC P+V YN+ I++ C KR+ ++
Sbjct: 278 ADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDL 337
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL--KKPEEVPWVL-ERMERNGCKMSTDTYNVILKLY 441
LDEM K S PN T+N + + W L RM GC +T + +++L+
Sbjct: 338 LDEMVNKGLS--PNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLF 395
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY----DKGRLEDALSYFHEMRLKGM 497
++ E+ W +M +KG G SY ++ L+ D G+L +A S F +M KG
Sbjct: 396 KKYEKEEMALELWNDMIQKGFG----SYILVSEELFDLLCDLGKLIEAESCFLQMVDKGH 451
Query: 498 VP 499
P
Sbjct: 452 KP 453
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 17/199 (8%)
Query: 313 RLFQAMWE-----KGRKPDVVTCNCIIDALCFKKRI---PEALEVLREMKNRGCLPNVTT 364
R F +W+ K + P +++ ++ L ++ + +E R+ K +VT
Sbjct: 122 RKFDKIWDVLLDVKFKDPSLISLRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTC 181
Query: 365 YNSLIKHLCKIKRM---ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER 421
+N+L++ LC+ K M VY L M + PN TFN LL K EE +
Sbjct: 182 FNALLRTLCQEKSMMDARNVYHGLKSMFR------PNLQTFNILLSGWKSSEEAEGFFDE 235
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M G K +YN ++ +Y DK +M + + D +YT +I GL G+
Sbjct: 236 MIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQ 295
Query: 482 LEDALSYFHEMRLKGMVPE 500
+ A + EM+ G P+
Sbjct: 296 PDKARNILKEMKEYGCYPD 314
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 96/233 (41%), Gaps = 5/233 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
E A FF + G P +N ++DV + R + +V +M D + TY
Sbjct: 227 EEAEGFFDEMIEMG-VKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTS 285
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE- 252
++ ++A + KE+G D++A+ + C K + A + N+
Sbjct: 286 IIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKG 345
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ T N+ + ++ A ++ ++ + C P++ + V K K AL
Sbjct: 346 LSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMAL 405
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
L+ M +KG ++ + D LC ++ EA +M ++G P+ T++
Sbjct: 406 ELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSF 458
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 198/420 (47%), Gaps = 11/420 (2%)
Query: 72 SLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINR 131
SL S + + P D AI ++ + +T + + L+ T +L+ +V+ R
Sbjct: 2 SLCTSAAGANLKPPPADSAAI--AKLILSSPNTTHQDDQFLLSTKTTPWTPNLVNSVLKR 59
Query: 132 YRFDWEAAYTFFKWV-SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VN 187
A FF ++ + +Y ++ F+ +D+ R + + M L +
Sbjct: 60 LWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPS 119
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
KT+ I+ RYA+A ++A+ +F E G DL++F +L LC+ K VE A F
Sbjct: 120 PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 179
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ + F D T N+ILNGWC++ + K++++ P+ TY T + + G+
Sbjct: 180 ALRGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 239
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A F M ++ + DVVT ++ I A V EM G LP+V TYN+
Sbjct: 240 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNA 299
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMER 424
+I+ LCK +E +EM ++ PN T+N L++ L E +++RME
Sbjct: 300 MIQVLCKKDNVENAVVMFEEMVRRGYE--PNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 357
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
GC+ + TYN++++ Y +K +E+M P+ +Y ++I G++ + R ED
Sbjct: 358 EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 417
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 126/254 (49%), Gaps = 8/254 (3%)
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
G KT I+ + G +A + + ++ + C D ++ T ++ L K ++ A
Sbjct: 117 GPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYE 176
Query: 314 LFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
LF+A+ +GR D VT N I++ C KR P+ LEVL+EM RG PN+TTYN+++K
Sbjct: 177 LFRAL--RGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGF 234
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKM 429
+ ++ +E+ EM++++ C + +T+ ++ E+ V + M R G
Sbjct: 235 FRAGQIRHAWEFFLEMKKRD--CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLP 292
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
S TYN ++++ D + +EEM ++G P+ +Y V+I GL+ G
Sbjct: 293 SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELM 352
Query: 490 HEMRLKGMVPEPRT 503
M +G P +T
Sbjct: 353 QRMENEGCEPNFQT 366
>gi|255547888|ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546052|gb|EEF47555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 466
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 208/433 (48%), Gaps = 14/433 (3%)
Query: 104 STKGEIEKALNQCE----LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVF 159
S+ EI ++L E + L+ +L+ ++ R++ DW++A F+W Y +
Sbjct: 29 SSHDEIVQSLVHDEVCNSIHLSHELVDKLLFRFKDDWKSALGVFRWAESRAGYKHSPEAY 88
Query: 160 NAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF 217
+ ++D++G+ ++ ++ + +EM V KT G + R+A A E + VFD+ F
Sbjct: 89 DTMVDIMGKMKQMDQMEFLLEEMEKGQHVTLKTVGKAMRRFAGARQWENVLRVFDKLGTF 148
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
G + + LL LC+ + VE+A F K+ + T NI ++GWC + V EA
Sbjct: 149 GLEKNTESMNLLLDTLCKERKVELAREIFLDLKSHISPNANTFNIFIHGWCKVNRVEEAY 208
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+++ C P ++Y+T V + L M +G P+VVT ++ AL
Sbjct: 209 WTIQEMKGHGCTPCVISYSTIVQFYCHRSNFSKVYELLDEMEAQGLIPNVVTYTSVMSAL 268
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
+ EAL++ + MK+ GC P+ YNSLI L K R E + E+E N P
Sbjct: 269 AKSEEYEEALQIAQRMKSVGCKPDTLFYNSLIHTLGKAGRPEEAIQVF-EVEMPNTGVPP 327
Query: 398 NEITFNYLLKSL---KKPEEVPWVLERMERN-GCKMSTDTYNVILK-LYVNWDCEDKVRH 452
N T+N ++ L + + +L+ +E + CK TY +LK + + +
Sbjct: 328 NTSTYNSMIAMLCHHSQERKALNLLKEIEASIICKPDVQTYYPLLKSCFKAGSIDSLLSQ 387
Query: 453 TWEEMEKK-GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
++M KK + D +YT+++HGL + E A F EM K M P+ +T L+ D
Sbjct: 388 LLDDMVKKHHLSLDFSAYTLLVHGLCRANKCEWAYCLFEEMIGKDMTPKYQTCRLLLD-E 446
Query: 512 IKLKERGEQGKKV 524
+KLK + +K+
Sbjct: 447 VKLKHMYDAAQKI 459
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 169/325 (52%), Gaps = 9/325 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD V T G L+N + + V +A+ + D+ E G D+ A+ ++ LC+ + V A
Sbjct: 153 PDRV---TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDA 209
Query: 243 ETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
FF E + ++ T ++NG C G +A R +D+IK K P+ +TY+ ++A
Sbjct: 210 LDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDA 269
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K GK+ A +F+ M PD+VT + +I+ LC RI EA ++ M ++GC P+
Sbjct: 270 FVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPD 329
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE- 420
V +YN+LI CK KR+E + +M Q+ + N +T+N L++ + +V E
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFRKMSQR--GLVNNTVTYNTLIQGFFQVGDVDKAQEF 387
Query: 421 --RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+M+ G TYN++L + +K +E+M+K M D +YT +I G+
Sbjct: 388 FSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCK 447
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRT 503
G++EDA F + LKG+ P+ T
Sbjct: 448 TGKVEDAWGLFCSLSLKGLKPDIVT 472
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 141/299 (47%), Gaps = 6/299 (2%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+ +AI +F + + F LL + + K +V + + E D+ T NI
Sbjct: 66 LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++N +C V A ++K EPD VT + VN ++ ++ A+ L M E G
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+PD+V N IID+LC +R+ +AL+ +E+ +G PNV TY +L+ LC R
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK 439
L +M ++ + PN IT++ LL + K E + E M R TY+ ++
Sbjct: 246 RLLRDMIKRKIT--PNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLIN 303
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D D+ ++ M KG PD SY +I+G R+ED + F +M +G+V
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLV 362
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 111/216 (51%), Gaps = 12/216 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++++++ L R E Q+FD M PD+V +Y L+N + A VE+
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVV---SYNTLINGFCKAKRVEDG 349
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+ +F + + G +++ + L+ + V+ A+ FF S+ + FG DI T NI+L
Sbjct: 350 MKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFF-SQMDSFGVSPDIWTYNILLG 408
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G + +A ++D+ KS+ + D VTY T + + K GK+ A LF ++ KG KP
Sbjct: 409 GLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKP 468
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
D+VT ++ LC K E + +MK G + N
Sbjct: 469 DIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 18/291 (6%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P ++A+LD + + +E ++F+EM PD+V TY L+N ++E
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIV---TYSSLINGLCLHDRIDE 313
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
A +FD G D+ ++ L+ C+ K VE F + + + T N ++
Sbjct: 314 ANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQ 373
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ +G+V +A+ F+ + PD TY + L G L AL +F+ M +
Sbjct: 374 GFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDL 433
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+VT +I +C ++ +A + + +G P++ TY +++ LC V
Sbjct: 434 DIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALY 493
Query: 386 DEMEQ----KNGS--CLPN-EITFNY-LLKSLKKPEEVPWVLERMERNGCK 428
+M+Q KN S CL + +IT + L+K + P +L ++ GCK
Sbjct: 494 TKMKQEGLMKNDSMLCLGDGDITISAELIKKMLSCGYAPSLLGDIKPVGCK 544
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 101/231 (43%), Gaps = 34/231 (14%)
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+++A +++++K++ P V + ++A+ K K + L + M G + D+ T N
Sbjct: 66 LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+I+ C ++ AL VL +M G P+ T SL+ C+ R+ +D+M +
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 393 GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+ + +N ++ SL K V L+
Sbjct: 186 YR--PDIVAYNAIIDSLCKTRRVNDALD-------------------------------- 211
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++E+ +KG+ P+ +YT +++GL + GR DA +M + + P T
Sbjct: 212 FFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVIT 262
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI- 400
++ +A+ + REM P++ +N L+ + K+K+ + V +ME + N++
Sbjct: 65 KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLG---IRNDLY 121
Query: 401 TFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC-----EDKVRHTWE 455
TFN ++ +V L + + K+ + V + VN C D V +
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKM-LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV-D 179
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+M + G PD +Y +I L R+ DAL +F E+ KG+ P T
Sbjct: 180 KMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVT 227
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 187/368 (50%), Gaps = 9/368 (2%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VN 187
R+ + FF W + ++ + ++D+ G+ R+F Q+ D M +
Sbjct: 121 RHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIP 180
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
+T+ IL+ RY A + EA+ F+R +++G D AF ++ L + + A++FF+
Sbjct: 181 VETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFD 240
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
S K+ F D+ +++GWC GN+ EA+R + ++ + +P+ TY+ ++AL + G+
Sbjct: 241 SLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQ 300
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A +F M + G P+ +T N ++ R + L+V +MK GC P+ TYN
Sbjct: 301 ITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNF 360
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMER 424
LI+ C+ +E + L+ +++ C N +FN + + K +V + +M+
Sbjct: 361 LIESHCRDDNLEEAVKILNSVKK---GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKD 417
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
C+ +T TYN++++++ + D V +EM++ + P+ +Y V+I G +
Sbjct: 418 LKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNN 477
Query: 485 ALSYFHEM 492
A S+F EM
Sbjct: 478 AYSFFKEM 485
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 35/237 (14%)
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
++T I++ + G EA + + C+PD + ++ +++L+KK + A F
Sbjct: 181 VETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFD 240
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
++ ++ +PDVV ++ C I EA V EMK G PNV TY+ +I LC+
Sbjct: 241 SLKDRF-EPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSG 299
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNV 436
++ ++ EM + C PN ITF N
Sbjct: 300 QITRAHDVFSEM--IDVGCDPNAITF--------------------------------NN 325
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
+++++V +KV + +M++ G PD +Y +I LE+A+ + ++
Sbjct: 326 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVK 382
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 4/239 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P ++ ++D L R+ + VF EM D+ N T+ L+ + A E+ + V
Sbjct: 283 PNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQV 342
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
+++ K G D + L+ CR ++E A S K + + N I L
Sbjct: 343 YNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCISKL 402
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G+V A R + + KC P++VTY + K L+L + M E +P+ T
Sbjct: 403 GDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTY 462
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCL-PNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+I C A +EM CL P++ Y +++ L K +++ E +++M
Sbjct: 463 RVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKM 521
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLER 421
Y +I K+++ + ++ +D M+ +N +P E TF L++ K E R
Sbjct: 149 YMEMIDLAGKVRQFDLAWQLIDLMKTRNVE-IPVE-TFTILVRRYVKAGLAAEAVHAFNR 206
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
ME GCK ++V++ + + ++ ++ + PD YT ++HG G
Sbjct: 207 MEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGN 265
Query: 482 LEDALSYFHEMRLKGMVPEPRTGILVND 509
+ +A F EM++ G+ P T +V D
Sbjct: 266 ISEAERVFGEMKMAGIQPNVYTYSIVID 293
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 170/325 (52%), Gaps = 9/325 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD V T G L+N + + V +A+ + D+ E G D+ A+ ++ LC+ K V A
Sbjct: 153 PDRV---TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 243 ETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
FF E E+ ++ T ++NG C +A R D+IK K P+ +TY+ ++A
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K GK+ A LF+ M PD+VT + +I+ LC RI EA ++ M ++GCL +
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE- 420
V +YN+LI CK KR+E + EM Q+ + N +T+N L++ + +V E
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRG--LVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 421 --RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+M+ G TYN++L + +K +E+M+K+ M D +YT +I G+
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRT 503
G++E+A S F + LKG+ P+ T
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVT 472
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 5/251 (1%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ T NI++N +C V A ++K EPD VT + VN ++ ++ A+ L
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M E G KPD+V N IID+LC KR+ +A + +E++ +G PNV TY +L+ LC
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
R L +M +K + PN IT++ LL + K E + E M R
Sbjct: 239 SRWSDAARLLSDMIKKKIT--PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY+ ++ D D+ ++ M KG D SY +I+G R+ED + F EM
Sbjct: 297 TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 493 RLKGMVPEPRT 503
+G+V T
Sbjct: 357 SQRGLVSNTVT 367
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 16/289 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P ++A+LD + + +E ++F+EM PD+V TY L+N ++E
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV---TYSSLINGLCLHDRIDE 313
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
A +FD G L D+ ++ L+ C+ K VE F E + + T N ++
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ G+V +A+ F+ + PD TY + L G+L AL +F+ M ++
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+VT +I +C ++ EA + + +G P++ TY +++ LC + V
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 386 DEMEQ----KNGSCLPN-EITFNY-LLKSLKKPEEVPWVLERMERNGCK 428
+M+Q KN L + +IT + L+K + P +L+ ++ CK
Sbjct: 494 TKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCK 542
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + D++KS+ P V + ++A+ K K + L + M G + D+ T N +I
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C ++ AL +L +M G P+ T SL+ C+ R+ +D+M +
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
P+ + +N ++ SL K + V D ++ +
Sbjct: 188 --PDIVAYNAIIDSLCKTKRV---------------NDAFDF-----------------F 213
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+E+E+KG+ P+ +YT +++GL + R DA +M K + P T
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI- 400
++ +A+++ +M P++ +N L+ + K+K+ + V +ME + N++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG---IRNDLY 121
Query: 401 TFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC-----EDKVRHTWE 455
TFN ++ +V L + + K+ + V + VN C D V +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKM-LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV-D 179
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+M + G PD +Y +I L R+ DA +F E+ KG+ P T
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 170/325 (52%), Gaps = 9/325 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD V T G L+N + + V +A+ + D+ E G D+ A+ ++ LC+ K V A
Sbjct: 256 PDRV---TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 312
Query: 243 ETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
FF E E+ ++ T ++NG C +A R D+IK K P+ +TY+ ++A
Sbjct: 313 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 372
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K GK+ A LF+ M PD+VT + +I+ LC RI EA ++ M ++GCL +
Sbjct: 373 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 432
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE- 420
V +YN+LI CK KR+E + EM Q+ + N +T+N L++ + +V E
Sbjct: 433 VVSYNTLINGFCKAKRVEDGMKLFREMSQR--GLVSNTVTYNTLIQGFFQAGDVDKAQEF 490
Query: 421 --RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+M+ G TYN++L + +K +E+M+K+ M D +YT +I G+
Sbjct: 491 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 550
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRT 503
G++E+A S F + LKG+ P+ T
Sbjct: 551 TGKVEEAWSLFCSLSLKGLKPDIVT 575
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 181/360 (50%), Gaps = 17/360 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
Y P + FN ++ L + E + + D M PDLV TYG+++N +
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV---TYGVVVNGLCKRGDTD 852
Query: 206 EAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
A + ++ ++ G+L+ + + ++ LC+YKH++ A F E E ++ T + +
Sbjct: 853 LAFNLLNKMEQ-GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 911
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ C G +A R D+I+ K PD T++ ++A K+GKL A +L+ M ++
Sbjct: 912 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 971
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P +VT + +I+ C R+ EA ++ M ++ C P+V TYN+LIK CK KR+E E
Sbjct: 972 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 1031
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKL 440
EM Q+ + N +T+N L++ L + + + + M +G + TYN +L
Sbjct: 1032 VFREMSQR--GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 1089
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+K +E +++ M P +Y +MI G+ G++ED F + LKG+ P+
Sbjct: 1090 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 1149
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 125/252 (49%), Gaps = 7/252 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ T NI++N +C V A ++K EPD VT + VN ++ ++ A+ L
Sbjct: 222 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 281
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M E G KPD+V N IID+LC KR+ +A + +E++ +G PNV TY +L+ LC
Sbjct: 282 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 341
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD--- 432
R L +M +K + PN IT++ LL + K +V E E +MS D
Sbjct: 342 SRWSDAARLLSDMIKKKIT--PNVITYSALLDAFVKNGKVLEAKELFEEM-VRMSIDPDI 398
Query: 433 -TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TY+ ++ D D+ ++ M KG D SY +I+G R+ED + F E
Sbjct: 399 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 458
Query: 492 MRLKGMVPEPRT 503
M +G+V T
Sbjct: 459 MSQRGLVSNTVT 470
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 159/354 (44%), Gaps = 44/354 (12%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
Y P +NAI+D L + +R V +A F
Sbjct: 289 YKPDIVAYNAIIDSLCKTKR--------------------------------VNDAFDFF 316
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
+ G ++ + L+ LC + A + K + ++ T + +L+ +
Sbjct: 317 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 376
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G V EAK ++++++ +PD VTY++ +N L ++ A ++F M KG DVV+
Sbjct: 377 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 436
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +I+ C KR+ + +++ REM RG + N TYN+LI+ + ++ E+ +M+
Sbjct: 437 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 496
Query: 391 KNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
S P+ T+N LL L + E+ + E M++ + TY +++
Sbjct: 497 FGIS--PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK---T 551
Query: 448 DKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
KV W + KG+ PD +YT M+ GL KG L + + + +M+ +G++
Sbjct: 552 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 605
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 180/409 (44%), Gaps = 23/409 (5%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI 193
F + +Y + + +SR G + A+ + ++R F +I+ +
Sbjct: 654 FSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIE-------------FSK 700
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
LL+ A + + I + ++ + G + + L+ CR + +A + +
Sbjct: 701 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL-GKMMKL 759
Query: 254 GYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
GY+ I T++ +LNG+C + EA + + +P++VT+ T ++ L K A
Sbjct: 760 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 819
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ L M KG +PD+VT +++ LC + A +L +M+ P V YN++I
Sbjct: 820 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 879
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
LCK K M+ EME K PN +T++ L+ L + + +L M
Sbjct: 880 LCKYKHMDDALNLFKEMETK--GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 937
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
T++ ++ +V + ++EM K+ + P +Y+ +I+G RL++A
Sbjct: 938 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 997
Query: 489 FHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK-LTSLGLKGNA 536
F M K P+ T + K K R E+G +V + ++ GL GN
Sbjct: 998 FEFMVSKHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREMSQRGLVGNT 1045
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 125/263 (47%), Gaps = 12/263 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + VE +++DEM P +V TY L+N + ++E
Sbjct: 937 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV---TYSSLINGFCMHDRLDE 993
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F+ D+ + L+ C+YK VE E F E + + T NI++
Sbjct: 994 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 1053
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G+ A+ +K+++ P+ +TY T ++ L K GKL A+ +F+ + +P
Sbjct: 1054 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 1113
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ T N +I+ +C ++ + ++ + +G P+V YN++I C+ E
Sbjct: 1114 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 1173
Query: 386 DEMEQKNGSCLPNEITFNYLLKS 408
EM K LPN +N L+++
Sbjct: 1174 KEM--KEDGTLPNSGCYNTLIRA 1194
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 194/471 (41%), Gaps = 103/471 (21%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P ++++++ L R E Q+FD M L + +Y L+N + A VE+ + +
Sbjct: 396 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 455
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWC 268
F + G + + + L+ + V+ A+ FF S+ + FG DI T NI+L G C
Sbjct: 456 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF-SQMDFFGISPDIWTYNILLGGLC 514
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G + +A ++D+ K + + D VTY T + + K GK+ A LF ++ KG KPD+V
Sbjct: 515 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 574
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPN--------VTTYNSLIKHL-------- 372
T ++ LC K + E + +MK G + N +T LIK +
Sbjct: 575 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPS 634
Query: 373 ---------CKIK-------RMETVYEY--------LDEMEQKNGSCL----------PN 398
CK +T Y+Y L E++ + L P+
Sbjct: 635 LLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPS 694
Query: 399 EITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLY-------------- 441
I F+ LL ++ K + V+ E+M+ G + TY++++ +
Sbjct: 695 IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLG 754
Query: 442 -----------------VNWDCEDK----VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
+N C K ++M G P+ ++ +IHGL+
Sbjct: 755 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 814
Query: 481 RLEDALSYFHEMRLKGMVPEPRT-GILVN--------DMNIKLKERGEQGK 522
+ +A++ M KG P+ T G++VN D+ L + EQGK
Sbjct: 815 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 865
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 34/225 (15%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + D++KS+ P V + ++A+ K K + L + M G + D+ T N +I
Sbjct: 171 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 230
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C ++ AL +L +M G P+ T SL+ C+ R+ +D+M +
Sbjct: 231 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 290
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
P+ + +N ++ SL K + V D ++ +
Sbjct: 291 --PDIVAYNAIIDSLCKTKRV---------------NDAFDF-----------------F 316
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+E+E+KG+ P+ +YT +++GL + R DA +M K + P
Sbjct: 317 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 361
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI- 400
++ +A+++ +M P++ +N L+ + K+K+ + V +ME + N++
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG---IRNDLY 224
Query: 401 TFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC-----EDKVRHTWE 455
TFN ++ +V L + + K+ + V + VN C D V +
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKM-LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV-D 282
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+M + G PD +Y +I L R+ DA +F E+ KG+ P T
Sbjct: 283 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 330
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 83/223 (37%), Gaps = 39/223 (17%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++ + +R E ++VF EM + N TY IL+ A + A +
Sbjct: 1008 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 1067
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE----------------------- 247
F G ++ + LL LC+ +E A FE
Sbjct: 1068 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 1127
Query: 248 SEKNEFGYD-------------IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ K E G+D + N +++G+C G+ EA +K++ + P+S
Sbjct: 1128 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 1187
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
Y T + A + G + L + M G D T + + L
Sbjct: 1188 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 1230
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 180/357 (50%), Gaps = 12/357 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++ ++ +QV D M PD+V TY +L + +++A+ V
Sbjct: 182 PDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVV---TYNTILRTLCDSGKLKQAMEV 238
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCV 269
DR+ + D+ + L+ C+ V A + +N+ D+ T N+++NG C
Sbjct: 239 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 298
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA +F ++ C+P+ +T+ + ++ G+ A +L M KG P VVT
Sbjct: 299 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 358
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I+ LC + + A+++L +M GC PN +YN L+ CK K+M+ EYLD M
Sbjct: 359 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 418
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ C P+ +T+N LL +L K +V +L ++ GC TYN ++
Sbjct: 419 SR--GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 476
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ +EM +KG+ PD +Y+ ++ GL +G++++A+ +FH++ G+ P T
Sbjct: 477 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 533
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 164/332 (49%), Gaps = 10/332 (3%)
Query: 171 RFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+F+E + ++PD++ + L+ + ++A V + ++ G + D+ + L+
Sbjct: 135 KFLESMVYRGDIPDIIPCTS---LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLI 191
Query: 231 LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
C+ ++ A + + D+ T N IL C G + +A ++ +C P
Sbjct: 192 SGYCKSGEIDNALQVLD--RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP 249
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D +TY + A K+ +G A++L M KG KPDVVT N +I+ +C + R+ EA++ L
Sbjct: 250 DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 309
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
M + GC PNV T+N +++ +C R + L +M +K C P+ +TFN L+ L
Sbjct: 310 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK--GCSPSVVTFNILINFLC 367
Query: 411 KPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+ + +LE+M +GC ++ +YN +L + D+ + M +G PD
Sbjct: 368 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 427
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+Y ++ L G+++ A+ +++ KG P
Sbjct: 428 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 459
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 181/394 (45%), Gaps = 52/394 (13%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
+ +P +N IL L + + + ++V D PD++ TY IL+ V
Sbjct: 211 NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI---TYTILIEATCKESGV 267
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNI 262
+A+ + D + G D+ + L+ +C+ ++ A F + + +G ++ T NI
Sbjct: 268 GQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS-YGCQPNVITHNI 326
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
IL C G +A++ D+++ C P VT+ +N L ++G LG A+ + + M G
Sbjct: 327 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 386
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P+ ++ N ++ C +K++ A+E L M +RGC P++ TYN+L+ LCK +++
Sbjct: 387 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 446
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILK 439
E L+++ K C P IT+N ++ L K E +L+ M R G K TY+ ++
Sbjct: 447 EILNQLSSK--GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 504
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPD---------------------------------- 465
D+ + ++E G+ P+
Sbjct: 505 GLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKP 564
Query: 466 -QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ +YT++I G+ +G ++AL +E+ +G+V
Sbjct: 565 TEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 166/361 (45%), Gaps = 28/361 (7%)
Query: 65 ETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQC-------E 117
++ +L ++ D + + + YP D I + I TC S G+ K L++ +
Sbjct: 228 DSGKLKQAMEVLDRQLQKECYP-DVITYTIL-IEATCKESGVGQAMKLLDEMRNKGSKPD 285
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVF--NAILDVLGRARRFVEL 175
+ + LI + R D EA K+++ Y NV N IL + R+++
Sbjct: 286 VVTYNVLINGICKEGRLD-EA----IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDA 340
Query: 176 IQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL 229
++ +M P +V T+ IL+N ++ AI + ++ G + ++ L
Sbjct: 341 EKLLSDMLRKGCSPSVV---TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPL 397
Query: 230 LLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
L C+ K ++ A + + + Y DI T N +L C G V A + C
Sbjct: 398 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 457
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
P +TY T ++ L+K GK A++L M KG KPD++T + ++ L + ++ EA++
Sbjct: 458 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 517
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+++ G PN TYNS++ LCK ++ + ++L M K C P E T+ L++
Sbjct: 518 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR--CKPTEATYTILIEG 575
Query: 409 L 409
+
Sbjct: 576 I 576
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 8/201 (3%)
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L + G+L + ++M +G PD++ C +I C + +A V+ ++ G +P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V TYN LI CK ++ + LD M + P+ +T+N +L++L K ++ V
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM-----NVAPDVVTYNTILRTLCDSGKLKQAMEV 238
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L+R + C TY ++++ + +EM KG PD +Y V+I+G+
Sbjct: 239 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 298
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
+GRL++A+ + + M G P
Sbjct: 299 EGRLDEAIKFLNNMPSYGCQP 319
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 9/242 (3%)
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G + + +F + ++ PD + + + + GK A + + + + G PDV+T
Sbjct: 128 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 187
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +I C I AL+VL M P+V TYN++++ LC +++ E LD Q
Sbjct: 188 NVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 244
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCE 447
K C P+ IT+ L+++ K V +L+ M G K TYNV++
Sbjct: 245 K--ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GIL 506
D+ M G P+ ++ +++ + GR DA +M KG P T IL
Sbjct: 303 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 362
Query: 507 VN 508
+N
Sbjct: 363 IN 364
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 190/361 (52%), Gaps = 17/361 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++ FNA+++ L + E +++F+EM P+++ +Y ++N A
Sbjct: 156 PTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVI---SYNTIINGLCKTGNTSMA 212
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+ VF + ++ G D+ + ++ LC+ + V A F SE + G ++ T N +++
Sbjct: 213 VDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFL-SEMLDRGIPPNVFTYNCMVH 271
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C+LG + EA R +K+++ PD+VT V+ L K+G + A +F+ M EKG +P
Sbjct: 272 GFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEP 331
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
++ T N ++D C ++ + EA +V M +GC P V +YN LI CK +RM+ L
Sbjct: 332 NISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLL 391
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
EM K + P+ +T++ L++ L +P+E + + M G + TY+++L +
Sbjct: 392 AEMYHK--ALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFC 449
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
D+ + M++K + P+ +T++I G++ G+LE A F ++ G+ P R
Sbjct: 450 KHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIR 509
Query: 503 T 503
T
Sbjct: 510 T 510
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 154/317 (48%), Gaps = 6/317 (1%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE- 249
+G L +A + + ++ FG ++ + L+ LCR HV+ A +
Sbjct: 91 FGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMF 150
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K T N ++NG C G + EA + ++++ EP+ ++Y T +N L K G
Sbjct: 151 KLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTS 210
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+ +F+ M + G KPDVVT N IID+LC + + +A+E L EM +RG PNV TYN ++
Sbjct: 211 MAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMV 270
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
C + ++ EM ++ +P+ +T L+ L K E V E M G
Sbjct: 271 HGFCILGQLNEATRLFKEMVGRD--VMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKG 328
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ + TYN ++ Y ++ + +E M ++G P SY ++I+G R+++A
Sbjct: 329 VEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAK 388
Query: 487 SYFHEMRLKGMVPEPRT 503
S EM K + P+ T
Sbjct: 389 SLLAEMYHKALNPDTVT 405
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 171/371 (46%), Gaps = 13/371 (3%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV----NEKTYG 192
+A +F++ V + P F L + +++ ++ + ++M DL N +
Sbjct: 71 DALASFYRMVRM--NPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQM-DLFGVTHNVYSLN 127
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKN 251
+L+N + V+ A+ + + + G S F L+ LC + E E F E +
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
++ + N I+NG C GN A +K + ++ C+PD VTY T +++L K + A
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ M ++G P+V T NC++ C ++ EA + +EM R +P+ T L+
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDG 307
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
LCK + + M +K PN T+N L+ + E V E M R GC
Sbjct: 308 LCKEGMVSEARLVFETMTEKGVE--PNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCA 365
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+YN+++ + D+ + EM K + PD +Y+ ++ GL GR ++AL+
Sbjct: 366 PGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNI 425
Query: 489 FHEMRLKGMVP 499
F EM G++P
Sbjct: 426 FKEMCSYGLLP 436
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 117/238 (49%), Gaps = 14/238 (5%)
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
F++ +++ P + F+ + KK + T + L M G +V + N +I+ LC
Sbjct: 76 FYR-MVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLC 134
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
+ A+ +L +M G P +T+N+LI LC +++ E +EM ++ PN
Sbjct: 135 RLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHE--PN 192
Query: 399 EITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT-- 453
I++N ++ L K V ++ME+NGCK TYN I ++ C+D++ +
Sbjct: 193 VISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTI----IDSLCKDRLVNDAM 248
Query: 454 --WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
EM +G+ P+ +Y M+HG G+L +A F EM + ++P+ T ++ D
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVD 306
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 139/299 (46%), Gaps = 16/299 (5%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F+ ++ +G P + +NA++D R E +VF+ M P + +Y
Sbjct: 317 ARLVFETMTEKG-VEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV---HSYN 372
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
IL+N + + ++EA + D + L+ LC++ + A F+ E
Sbjct: 373 ILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFK-EMCS 431
Query: 253 FGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+G ++ T +I+L+G+C G++ EA + K + + K EP+ V + + + GKL
Sbjct: 432 YGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEV 491
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A LF ++ G +P + T +I L + EA ++ R+M++ G LPN +YN +I+
Sbjct: 492 AKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQ 551
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKM 429
+ + T +DEM K S N TF LL L+ +E+ R G KM
Sbjct: 552 GFLQNQDSSTAIRLIDEMVGKRFS--ANLSTFQMLL-DLESQDEIISQFMRGSSQGRKM 607
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 180/357 (50%), Gaps = 12/357 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++ ++ +QV D M PD+V TY +L + +++A+ V
Sbjct: 125 PDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVV---TYNTILRTLCDSGKLKQAMEV 181
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCV 269
DR+ + D+ + L+ C+ V A + +N+ D+ T N+++NG C
Sbjct: 182 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 241
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA +F ++ C+P+ +T+ + ++ G+ A +L M KG P VVT
Sbjct: 242 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 301
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I+ LC + + A+++L +M GC PN +YN L+ CK K+M+ EYLD M
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 361
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ C P+ +T+N LL +L K +V +L ++ GC TYN ++
Sbjct: 362 SR--GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 419
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ +EM +KG+ PD +Y+ ++ GL +G++++A+ +FH++ G+ P T
Sbjct: 420 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 476
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 164/332 (49%), Gaps = 10/332 (3%)
Query: 171 RFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+F+E + ++PD++ + L+ + ++A V + ++ G + D+ + L+
Sbjct: 78 KFLESMVYRGDIPDIIPCTS---LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLI 134
Query: 231 LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
C+ ++ A + + D+ T N IL C G + +A ++ +C P
Sbjct: 135 SGYCKSGEIDNALQVLD--RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP 192
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D +TY + A K+ +G A++L M KG KPDVVT N +I+ +C + R+ EA++ L
Sbjct: 193 DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 252
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
M + GC PNV T+N +++ +C R + L +M +K C P+ +TFN L+ L
Sbjct: 253 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK--GCSPSVVTFNILINFLC 310
Query: 411 KPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+ + +LE+M +GC ++ +YN +L + D+ + M +G PD
Sbjct: 311 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 370
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+Y ++ L G+++ A+ +++ KG P
Sbjct: 371 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 402
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 181/394 (45%), Gaps = 52/394 (13%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
+ +P +N IL L + + + ++V D PD++ TY IL+ V
Sbjct: 154 NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI---TYTILIEATCKESGV 210
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNI 262
+A+ + D + G D+ + L+ +C+ ++ A F + + +G ++ T NI
Sbjct: 211 GQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS-YGCQPNVITHNI 269
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
IL C G +A++ D+++ C P VT+ +N L ++G LG A+ + + M G
Sbjct: 270 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 329
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P+ ++ N ++ C +K++ A+E L M +RGC P++ TYN+L+ LCK +++
Sbjct: 330 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 389
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILK 439
E L+++ K C P IT+N ++ L K E +L+ M R G K TY+ ++
Sbjct: 390 EILNQLSSK--GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 447
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPD---------------------------------- 465
D+ + ++E G+ P+
Sbjct: 448 GLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKP 507
Query: 466 -QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ +YT++I G+ +G ++AL +E+ +G+V
Sbjct: 508 TEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 166/361 (45%), Gaps = 28/361 (7%)
Query: 65 ETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQC-------E 117
++ +L ++ D + + + YP D I + I TC S G+ K L++ +
Sbjct: 171 DSGKLKQAMEVLDRQLQKECYP-DVITYTIL-IEATCKESGVGQAMKLLDEMRNKGSKPD 228
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVF--NAILDVLGRARRFVEL 175
+ + LI + R D EA K+++ Y NV N IL + R+++
Sbjct: 229 VVTYNVLINGICKEGRLD-EA----IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDA 283
Query: 176 IQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL 229
++ +M P +V T+ IL+N ++ AI + ++ G + ++ L
Sbjct: 284 EKLLSDMLRKGCSPSVV---TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPL 340
Query: 230 LLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
L C+ K ++ A + + + Y DI T N +L C G V A + C
Sbjct: 341 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 400
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
P +TY T ++ L+K GK A++L M KG KPD++T + ++ L + ++ EA++
Sbjct: 401 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 460
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+++ G PN TYNS++ LCK ++ + ++L M K C P E T+ L++
Sbjct: 461 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR--CKPTEATYTILIEG 518
Query: 409 L 409
+
Sbjct: 519 I 519
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 8/201 (3%)
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L + G+L + ++M +G PD++ C +I C + +A V+ ++ G +P+
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V TYN LI CK ++ + LD M + P+ +T+N +L++L K ++ V
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM-----NVAPDVVTYNTILRTLCDSGKLKQAMEV 181
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L+R + C TY ++++ + +EM KG PD +Y V+I+G+
Sbjct: 182 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 241
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
+GRL++A+ + + M G P
Sbjct: 242 EGRLDEAIKFLNNMPSYGCQP 262
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 9/242 (3%)
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G + + +F + ++ PD + + + + GK A + + + + G PDV+T
Sbjct: 71 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 130
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +I C I AL+VL M P+V TYN++++ LC +++ E LD Q
Sbjct: 131 NVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 187
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCE 447
K C P+ IT+ L+++ K V +L+ M G K TYNV++
Sbjct: 188 K--ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GIL 506
D+ M G P+ ++ +++ + GR DA +M KG P T IL
Sbjct: 246 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 305
Query: 507 VN 508
+N
Sbjct: 306 IN 307
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 171/358 (47%), Gaps = 10/358 (2%)
Query: 154 PGSNV-FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIG 209
P S V F+ +L + R + + ++ ++ +M N T IL+N + + + A
Sbjct: 51 PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFS 110
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWC 268
V + G + F L+ LC + A F+ E F D+ T ++NG C
Sbjct: 111 VLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLC 170
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+GN A RF + + + C P V Y+T +++L K +L AL LF M KG P+
Sbjct: 171 KVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNF 230
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T + +I LC EA+ + M +R +P+ T+N+L+ LCK + + +D M
Sbjct: 231 TYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVM 290
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWD 445
Q + P+ +T+N L+ E+ V + M R GC S +Y ++ Y
Sbjct: 291 IQSDLK--PDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQ 348
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
DK +EEM ++G+ PD +Y +IHGL GRL DA++ FHEM + G +P+ T
Sbjct: 349 IMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVT 406
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 193/438 (44%), Gaps = 68/438 (15%)
Query: 119 TLTDDLIVNV---INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVEL 175
T T ++++N +NR F A++ + + G Y P + F ++ L + E
Sbjct: 89 TYTLNILINSFCHLNRLGF----AFSVLGDILKLG-YQPSTATFTTLIRGLCVEGKIGEA 143
Query: 176 IQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL 229
+Q+FD+M PD++ TYG L+N AI ++ + + +
Sbjct: 144 LQLFDKMTGEGFQPDVL---TYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTI 200
Query: 230 LLWLCRYKHVEVAETFFES------EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
+ LC+ + + A + F N F Y + +++G C+LG+ EA R + +
Sbjct: 201 IDSLCKDRQLTEALSLFSDMLAKGISPNNFTY-----SSLIHGLCILGHWKEAIRLFYAM 255
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
I K PD +T+ T V+AL K+G + A + M + KPDVVT N ++D C + +
Sbjct: 256 IHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEM 315
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
+ + V M +GC+P+V +Y +LI CKI+ M+ +EM Q+ +P+ +T+N
Sbjct: 316 GKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQG--LIPDTVTYN 373
Query: 404 YLLKSL--------------------KKPEEVPW------------------VLERMERN 425
L+ L + P+ V + +L+ +E
Sbjct: 374 TLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGT 433
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
Y++++ + R + ++ KG+ PD R+YT+MI+GL +G L +A
Sbjct: 434 NLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEA 493
Query: 486 LSYFHEMRLKGMVPEPRT 503
F EM G P T
Sbjct: 494 SKLFGEMDENGCSPNACT 511
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 157/370 (42%), Gaps = 46/370 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P V++ I+D L + R+ E + +F +M P N TY L++ +EA
Sbjct: 192 PTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISP---NNFTYSSLIHGLCILGHWKEA 248
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNG 266
I +F + D F L+ LC+ V A + +++ D+ T N +++G
Sbjct: 249 IRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDG 308
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C+ + + + +++ C P ++Y T +N K + A+ LF+ M ++G PD
Sbjct: 309 HCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPD 368
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VT N +I LC R+ +A+ + EM G +P++ TY L +LCK R+ L
Sbjct: 369 TVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLK 428
Query: 387 EMEQKN-------------GSCLPNEI--------------------TFNYLLKSLKKP- 412
+E N G C E+ T+ ++ L +
Sbjct: 429 VIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQG 488
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
E + M+ NGC + TYN+I + ++ + + ++EM +G D + T
Sbjct: 489 LLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTT 548
Query: 471 VMIHGLYDKG 480
+++ L D G
Sbjct: 549 LLVEMLSDDG 558
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 149/331 (45%), Gaps = 19/331 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
EA F+ + R+ P FN ++D L + V+ V D M PD+V T
Sbjct: 247 EAIRLFYAMIHRK--IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVV---T 301
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y L++ + + + + VFD G + + ++ L+ C+ + ++ A FE E
Sbjct: 302 YNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFE-EM 360
Query: 251 NEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
++ G D T N +++G C +G + +A + +++ PD VTY + L K +L
Sbjct: 361 SQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRL 420
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A+ L + + PD+ + ++D +C + A ++ ++ ++G P+V TY +
Sbjct: 421 AEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIM 480
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLERMERN 425
I LC+ + + EM++ NG C PN T+N + + + E + + M
Sbjct: 481 INGLCQQGLLAEASKLFGEMDE-NG-CSPNACTYNLITRGFLRNNETLRAIQLFQEMLSR 538
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
G + T +++++ + + V+ E
Sbjct: 539 GFSIDVSTTTLLVEMLSDDGLDQSVKQILCE 569
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 111/236 (47%), Gaps = 13/236 (5%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + +++ + P V ++ + ++T+ T L L++ M G + T N +I
Sbjct: 37 DALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILI 96
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
++ C R+ A VL ++ G P+ T+ +LI+ LC ++ + D+M +
Sbjct: 97 NSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQ 156
Query: 395 CLPNEITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILKLYVNWDCEDK-- 449
P+ +T+ L+ L K L ME+ C+ + Y+ I ++ C+D+
Sbjct: 157 --PDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTI----IDSLCKDRQL 210
Query: 450 --VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +M KG+ P+ +Y+ +IHGL G ++A+ F+ M + ++P+ T
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 266
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 10/220 (4%)
Query: 178 VFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
+F+EM PD V TY L++ + +AI +F +G++ DL ++ L
Sbjct: 356 LFEEMSQQGLIPDTV---TYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFD 412
Query: 232 WLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
+LC+ + A + E DI +I+++G C G + A+ + + P
Sbjct: 413 YLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHP 472
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D TY +N L ++G L A +LF M E G P+ T N I A+++
Sbjct: 473 DVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLF 532
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+EM +RG +V+T L++ L ++V + L E Q
Sbjct: 533 QEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 170/325 (52%), Gaps = 9/325 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD V T G L+N + + V +A+ + D+ E G D+ A+ ++ LC+ K V A
Sbjct: 153 PDRV---TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 243 ETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
FF E E+ ++ T ++NG C +A R D+IK K P+ +TY+ ++A
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K GK+ A LF+ M PD+VT + +++ LC RI EA ++ M ++GCL +
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE- 420
V +YN+LI CK KR+E + EM Q+ + N +T+N L++ + +V E
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRG--LVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 421 --RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+M+ G TYN++L + +K +E+M+K+ M D +YT +I G+
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRT 503
G++E+A S F + LKG+ P+ T
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVT 472
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 123/252 (48%), Gaps = 7/252 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ T NI++N +C V A ++K EPD VT + VN ++ ++ A+ L
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M E G KPD+V N IID+LC KR+ +A + +E++ +G PNV TY +L+ LC
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYN 435
R L +M +K + PN IT++ LL + K +V E E +MS D
Sbjct: 239 SRWSDAARLLSDMIKKKIT--PNVITYSALLDAFVKNGKVLEAKELFEEM-VRMSIDPDI 295
Query: 436 VILKLYVNWDCE----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
V VN C D+ ++ M KG D SY +I+G R+ED + F E
Sbjct: 296 VTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 492 MRLKGMVPEPRT 503
M +G+V T
Sbjct: 356 MSQRGLVSNTVT 367
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 16/289 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P ++A+LD + + +E ++F+EM PD+V TY L+N ++E
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV---TYSSLVNGLCLHDRIDE 313
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
A +FD G L D+ ++ L+ C+ K VE F E + + T N ++
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ G+V +A+ F+ + PD TY + L G+L AL +F+ M ++
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+VT +I +C ++ EA + + +G P++ TY +++ LC + V
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 386 DEMEQ----KNGSCLPN-EITFNY-LLKSLKKPEEVPWVLERMERNGCK 428
+M+Q KN L + +IT + L+K + P +L+ ++ CK
Sbjct: 494 TKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCK 542
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + D++KS+ P V + ++A+ K K + L + M G + D+ T N +I
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C ++ AL +L +M G P+ T SL+ C+ R+ +D+M +
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
P+ + +N ++ SL K + V D ++ +
Sbjct: 188 --PDIVAYNAIIDSLCKTKRV---------------NDAFDF-----------------F 213
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+E+E+KG+ P+ +YT +++GL + R DA +M K + P T
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI- 400
++ +A+++ +M P++ +N L+ + K+K+ + V +ME + N++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG---IRNDLY 121
Query: 401 TFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC-----EDKVRHTWE 455
TFN ++ +V L + + K+ + V + VN C D V +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKM-LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV-D 179
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+M + G PD +Y +I L R+ DA +F E+ KG+ P T
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227
>gi|356499705|ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 500
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 211/439 (48%), Gaps = 26/439 (5%)
Query: 71 HSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVIN 130
H L +S++ + Q+ G IL S ST +++++L + L++D+I V+
Sbjct: 23 HRLLSSNQNDDVQKVFG---------ILS--STSTPEQLKQSLKSSGVFLSNDVIDQVLK 71
Query: 131 RYRF---DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE----LIQVFDEMP 183
R RF + FF++ R + S + +L +LGR+R F + LI+ +
Sbjct: 72 RVRFSHGNPSQTLEFFRYTGRRKGFYHSSFSLDTMLYILGRSRMFGQVWELLIEARRKDQ 131
Query: 184 DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE 243
+ +T ++L R A V + + F + ++ + D + F LL LC+ K + A
Sbjct: 132 TAITARTVMVVLGRIAKVCSVRQTVESFRKFRKLVQEFDTNCFNALLRTLCQEKSMADAR 191
Query: 244 TFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
+ S K+ F +++T NI+L+GW +A F+K++ + PD VTY + ++
Sbjct: 192 NVYHSLKHRFRPNLQTFNILLSGW---KTPEDADLFFKEMKEMGVTPDVVTYNSLMDVYC 248
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K ++ A ++ M ++ PDV+T CII L + +A VL+EMK GC P+
Sbjct: 249 KGREIEKAYKMLDEMRDQDFSPDVITYTCIIGGLGLIGQPDKARNVLKEMKEYGCYPDAA 308
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PW-VLE 420
YN+ I++ C KR+ + ++EM K S PN T+N + ++ W + +
Sbjct: 309 AYNAAIRNFCIAKRLGDAHGLVEEMVTKGLS--PNATTYNLFFRVFYWSNDLQSSWNMYQ 366
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
RM GC +T + +++L+ + + W +M +KG G V+ L D G
Sbjct: 367 RMMVEGCLPNTQSCMFLIRLFRRHEKVEMALQFWGDMVEKGFGSYTLVSDVLFDLLCDMG 426
Query: 481 RLEDALSYFHEMRLKGMVP 499
+LE+A F EM KG P
Sbjct: 427 KLEEAEKCFLEMVEKGQKP 445
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 134/286 (46%), Gaps = 16/286 (5%)
Query: 240 EVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
+V E E+ K++ +T+ ++L + +V + ++ K E D+ +
Sbjct: 118 QVWELLIEARRKDQTAITARTVMVVLGRIAKVCSVRQTVESFRKFRKLVQEFDTNCFNAL 177
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL-REMKNRG 357
+ L ++ + A ++ ++ + R P++ T N ++ + PE ++ +EMK G
Sbjct: 178 LRTLCQEKSMADARNVYHSLKHRFR-PNLQTFNILLSGW----KTPEDADLFFKEMKEMG 232
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KPEE 414
P+V TYNSL+ CK + +E Y+ LDEM ++ S P+ IT+ ++ L +P++
Sbjct: 233 VTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFS--PDVITYTCIIGGLGLIGQPDK 290
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
VL+ M+ GC YN ++ + EEM KG+ P+ +Y +
Sbjct: 291 ARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTKGLSPNATTYNLFFR 350
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQ 520
Y L+ + + + M ++G +P ++ + + I+L R E+
Sbjct: 351 VFYWSNDLQSSWNMYQRMMVEGCLPNTQSCMFL----IRLFRRHEK 392
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 19/236 (8%)
Query: 313 RLFQAMWE---KGRKPD--VVTCNCI------IDALCFKKRIPEALEVLREMKNRGCLPN 361
R+F +WE + R+ D +T + I +C ++ E+ R++ +
Sbjct: 114 RMFGQVWELLIEARRKDQTAITARTVMVVLGRIAKVCSVRQTVESFRKFRKLVQEF---D 170
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER 421
+N+L++ LC+ K M ++ + PN TFN LL K PE+ +
Sbjct: 171 TNCFNALLRTLCQEKSMADARNVYHSLKHR---FRPNLQTFNILLSGWKTPEDADLFFKE 227
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M+ G TYN ++ +Y +K +EM + PD +YT +I GL G+
Sbjct: 228 MKEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFSPDVITYTCIIGGLGLIGQ 287
Query: 482 LEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
+ A + EM+ G P+ + + I K G+ V ++ + GL NA
Sbjct: 288 PDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIA-KRLGDAHGLVEEMVTKGLSPNA 342
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 11/259 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A FFK + +E +P +N+++DV + R + ++ DEM PD++ T
Sbjct: 219 EDADLFFKEM-KEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFSPDVI---T 274
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y ++ ++A V KE+G D +A+ + C K + A E
Sbjct: 275 YTCIIGGLGLIGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMV 334
Query: 251 NE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ + T N+ + ++ + ++ ++ C P++ + + + K+
Sbjct: 335 TKGLSPNATTYNLFFRVFYWSNDLQSSWNMYQRMMVEGCLPNTQSCMFLIRLFRRHEKVE 394
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL+ + M EKG + + + D LC ++ EA + EM +G P+ ++ +
Sbjct: 395 MALQFWGDMVEKGFGSYTLVSDVLFDLLCDMGKLEEAEKCFLEMVEKGQKPSHVSFRRIK 454
Query: 370 KHLCKIKRMETVYEYLDEM 388
+ R E + + +M
Sbjct: 455 VLMELANRHEALQSLMQKM 473
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 186/381 (48%), Gaps = 18/381 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-------PDLVN 187
D + A + ++ G Y P + +N I+ L R+ +Q+F EM PD+
Sbjct: 164 DLDGAVELVRKMTERG-YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF- 221
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
TY +++ + V++A + + G ++ + +LL LC+ ++ A +
Sbjct: 222 --TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQ 279
Query: 248 S-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
++ +I T N I++G C LG + EA ++++ C+P+ VTY ++A K G
Sbjct: 280 RMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 339
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
K A+ L + M EKG P++ T N ++D C K + A ++L M +GC+PNV +YN
Sbjct: 340 KAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYN 399
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RME 423
++I LCK ++ L++M N C+P+ +TFN ++ ++ K V E ++
Sbjct: 400 TVIAGLCKATKVHEGVLLLEQMLSNN--CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 457
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK-GMGPDQRSYTVMIHGLYDKGRL 482
+GC + TYN ++ D+ + EM +K G PD +Y +I GL R+
Sbjct: 458 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 517
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
+ A F +M G+ P+ T
Sbjct: 518 DRAYKLFLQMLSDGLAPDDVT 538
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 177/354 (50%), Gaps = 15/354 (4%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
+ V +IL L A + + + F EM PD V TY ++N + + +++AI +
Sbjct: 10 AGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSV---TYNTMINGLSKSDRLDDAIRL 66
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCV 269
+ + G ++ ++ +L C+ VE A E D+ + ++NG C
Sbjct: 67 LEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCK 126
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
L V EA R +I+ C+P+ +TY T V+ + G L A+ L + M E+G +P+ +T
Sbjct: 127 LDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAIT 186
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRG-CLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
N I+ LC +++ AL++ +EM+ G C P+V TY++++ L K +++ ++ M
Sbjct: 187 YNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAM 246
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
K C PN +T++ LL L K +E +L+RM R+GC + TYN I+ +
Sbjct: 247 VSK--GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLG 304
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ H EEM G P+ +YTV++ G+ EDA+ M KG VP
Sbjct: 305 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP 358
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 184/375 (49%), Gaps = 11/375 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+ A + ++R G SP +N I+D + R E + +EM D N TY +
Sbjct: 272 DEATALLQRMTRSG-CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 330
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
LL+ + E+AIG+ + E G + +L + +LL C+ VE A S +
Sbjct: 331 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 390
Query: 254 GY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
++ + N ++ G C V+E + ++ + C PD VT+ T ++A+ K ++ A
Sbjct: 391 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAY 450
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM-KNRGCLPNVTTYNSLIKH 371
LF + E G P++VT N ++ LC +R +A +LREM + +GC P++ TYN++I
Sbjct: 451 ELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG 510
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCK 428
LCK KR++ Y+ +M + P+++T++ ++ SL K +E VLE M +NG
Sbjct: 511 LCKSKRVDRAYKLFLQMLSDGLA--PDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD 568
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TY ++ + DK + + KG PD ++++ I L +GRL A
Sbjct: 569 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 628
Query: 489 FHEMRLKGMVPEPRT 503
M G+VP+ T
Sbjct: 629 LETMLRAGLVPDTVT 643
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 134/291 (46%), Gaps = 42/291 (14%)
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ------ 316
IL G C G +A ++++ K+ C PDSVTY T +N L+K +L A+RL +
Sbjct: 16 ILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74
Query: 317 -----------------------AMW------EKGRKPDVVTCNCIIDALCFKKRIPEAL 347
A+W +G PDVV+ +I+ LC ++ EA
Sbjct: 75 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
V+ +M RGC PNV TY +L+ C++ ++ E + +M ++ PN IT+N ++
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYR--PNAITYNNIMH 192
Query: 408 SL---KKPEEVPWVLERMERNG-CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
L +K + + + ME +G C TY+ I+ V D E M KG
Sbjct: 193 GLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCS 252
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKL 514
P+ +Y+ ++HGL G+L++A + M G P T + D + KL
Sbjct: 253 PNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKL 303
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 121/249 (48%), Gaps = 14/249 (5%)
Query: 132 YRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-------PD 184
YR D AY F + G +P +N+++ L ++RRF + + EM PD
Sbjct: 444 YRVDI--AYELFNLIQESG-CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPD 500
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
++ TY +++ + V+ A +F + G D + ++ LC+++ ++ A
Sbjct: 501 II---TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANN 557
Query: 245 FFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
E KN F T +++G+C GN+ +A + ++ PD VT++ F++ L+
Sbjct: 558 VLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLS 617
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K+G+L A L + M G PD VT N ++ C R +A+++ M+ GC P+
Sbjct: 618 KRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNA 677
Query: 364 TYNSLIKHL 372
TY +L+ HL
Sbjct: 678 TYTTLVGHL 686
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 13/264 (4%)
Query: 154 PGSNVFNAILDVLGRARR------FVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P FN I+D + + R LIQ P+LV TY L++ + ++A
Sbjct: 428 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV---TYNSLVHGLCKSRRFDQA 484
Query: 208 IGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
+ + ++ G D+ + ++ LC+ K V+ A + F + + D T +I+++
Sbjct: 485 EYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVIS 544
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C + EA + ++K+ +P ++TY T ++ K G L AL + Q + KG P
Sbjct: 545 SLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYP 604
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DVVT + ID L + R+ +A E+L M G +P+ TYN+L+K C R E +
Sbjct: 605 DVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLF 664
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL 409
+ M Q C P+ T+ L+ L
Sbjct: 665 EVMRQ--CGCEPDNATYTTLVGHL 686
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 73/184 (39%), Gaps = 35/184 (19%)
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
M +G + + S+++ LC + + EM + +C P+ +T+N ++ L K
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK---TCPPDSVTYNTMINGLSKS 57
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+ + +D +R EEM G P+ SY +
Sbjct: 58 DRL-------------------------------DDAIR-LLEEMVDNGFAPNVFSYNTV 85
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGL 532
+HG R+E+AL +M ++G P+ + V + KL + E + + K+ G
Sbjct: 86 LHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGC 145
Query: 533 KGNA 536
+ N
Sbjct: 146 QPNV 149
>gi|357145431|ref|XP_003573640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Brachypodium distachyon]
Length = 523
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 188/386 (48%), Gaps = 13/386 (3%)
Query: 126 VNVINRYRFDWEAAYTFFKW-------VSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
V + R D EAA +W EG SP + ++ + G+A RF
Sbjct: 104 VRALWELRRDPEAAALAIRWGEYCSASSGAEGAGSPPAEAWHLAIWAAGKAGRFDLAWAA 163
Query: 179 FDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
M ++ + I++ RYAAA +E+A+ FD ++F D + F +LL LC+
Sbjct: 164 VRRMLHRGVLTRRAMIIVMERYAAASELEKALKTFDVMEKFKVQADQAVFYSLLRALCKS 223
Query: 237 KHVEVAETFFESEKNEFGYDIKTMNIILNGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTY 295
K++E AE K F + NIIL+GWC ++ +V EAKR WK++ PD +Y
Sbjct: 224 KNIEDAEELLLMRKKFFPLTAEGFNIILDGWCNIIIDVAEAKRVWKEMSSYCITPDGTSY 283
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
V+ +K G L LR++ M ++G P + N ++ L + + +A ++ ++ +
Sbjct: 284 TLMVSCFSKVGNLFDTLRVYDEMKKRGWTPGIGVYNSLVYVLTRENCMKDAKKIFSKIID 343
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
G NV TYNS+I LC+ +++ + +M K +P +T++ LK + +E
Sbjct: 344 EGLQLNVETYNSMIIPLCESCKLDEARIMMGDMIMKG--IVPTILTYHAFLKQ-EGVDET 400
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
+L +M+ NGC ++DT+ +++ ++ + W EM + + P Y +I G
Sbjct: 401 LQLLRKMKENGCGPNSDTFLMLIDKFIQANESGNALRVWNEMIRYDISPAYSHYMAVIQG 460
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEP 501
L G + AL Y+ EM+ KG +P
Sbjct: 461 LVKHGCIPRALEYYDEMKAKGFASDP 486
>gi|449455613|ref|XP_004145547.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g43820-like [Cucumis sativus]
Length = 572
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 177/404 (43%), Gaps = 3/404 (0%)
Query: 103 VSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAI 162
++ K IE AL ++ L+ D++ V+N EA TFF W ++ ++ +N I
Sbjct: 125 LNGKTAIEHALANTDVILSQDVVSKVLNTGSLGSEAMVTFFYWAIKQPSIPKDASSYNII 184
Query: 163 LDVLGRARRFVELIQVFDEMPDLVNEKTY---GILLNRYAAAHMVEEAIGVFDRRKEFGE 219
L LGR F ++ V M E T I+++ H V +A+ F KE G
Sbjct: 185 LKALGRRGFFDSMMDVLYNMTREGVEATLEMVSIVVDSLVKGHQVSKALQFFRNLKEIGL 244
Query: 220 LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
D LL +CR HV A +FF K +++ T NI++ GW G E ++
Sbjct: 245 KCDTETLNILLQCMCRRSHVGAANSFFNLTKGNIPFNVMTYNIVIGGWSRYGRHGEVEQM 304
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K + PD +T+ + L + ++ A+++F M E G PDV N +I
Sbjct: 305 LKAMELDGFSPDCLTHTYLIECLGRANQIDDAVKIFDKMDENGCTPDVDAYNAMISNFIC 364
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ L M + C P++ TY++LI K K++ E DEM +
Sbjct: 365 IGDFDQCLTYYERMLSNRCEPDMNTYSNLITGFLKAKKVADALEMFDEMVARIIPTTGAI 424
Query: 400 ITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
+F L S P + ++ + GC++S + Y ++L + + + W EM++
Sbjct: 425 TSFIQLSCSYGPPHAAMLIYKKARKVGCRISKNAYKLLLMRLSLFGKFGMLLNIWNEMQE 484
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G PD +Y I L G+LE+A+ E +G P RT
Sbjct: 485 SGYDPDVETYEHAIDCLCKTGQLENAVLVMEECLRQGFFPSRRT 528
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 96/238 (40%), Gaps = 9/238 (3%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+SP +++ LGRA + + +++FD+M PD+ Y +++ + +
Sbjct: 313 FSPDCLTHTYLIECLGRANQIDDAVKIFDKMDENGCTPDV---DAYNAMISNFICIGDFD 369
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILN 265
+ + ++R D++ + NL+ + K V A F+ + +
Sbjct: 370 QCLTYYERMLSNRCEPDMNTYSNLITGFLKAKKVADALEMFDEMVARIIPTTGAITSFIQ 429
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G + A +K K C Y + L+ GK G L ++ M E G P
Sbjct: 430 LSCSYGPPHAAMLIYKKARKVGCRISKNAYKLLLMRLSLFGKFGMLLNIWNEMQESGYDP 489
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
DV T ID LC ++ A+ V+ E +G P+ T + L L R E Y+
Sbjct: 490 DVETYEHAIDCLCKTGQLENAVLVMEECLRQGFFPSRRTRSKLNNKLLACNRTEMAYK 547
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 191/400 (47%), Gaps = 23/400 (5%)
Query: 91 AINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
A V +LKT S + + + L + + T +L+ V+ A FFK +
Sbjct: 40 ATIVNLVLKTDSQT----LTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHP 95
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEA 207
Y+ S+ F+ +D+ GR R + L + D M N KT+ I+ RY +A + A
Sbjct: 96 TYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRA 155
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET-FFESEKNEFGYDIKTMNIILNG 266
I +F E G + DL++F +L LC+ K VE+A+ F+ + F I+L G
Sbjct: 156 IKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGRF-------RILLKG 208
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ G + EA F+ + K KCE D VTY T V+ G++ A R+F M +G P
Sbjct: 209 FFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPS 268
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V T N I LC K + A+ V EM +G +PN TTYN +I+ LC + RME E++
Sbjct: 269 VATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMA 328
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVN 443
M K+ C PN +N +++ EE+ V E+M C + DTYN+++
Sbjct: 329 RM--KDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMFV 386
Query: 444 WDCEDKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKG 480
D + + EM ++G P + ++ ++ GL G
Sbjct: 387 RKKSDYLLTAGKLLIEMVERGFLPRKFTFNRVLDGLLLTG 426
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 80/196 (40%), Gaps = 42/196 (21%)
Query: 344 PEALEVLREMKNRGCLPNVTT-YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
P+AL+ + + +V++ ++ I +++ +T++ +D M + PN TF
Sbjct: 82 PKALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLG--PNPKTF 139
Query: 403 NYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK---------- 449
+ + S KP+ + M +GC +++N IL + C+ K
Sbjct: 140 AIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVL----CKSKRVEMADNKLF 195
Query: 450 -------------------VRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
++ WE +M+K+ D +YT ++HG G + A
Sbjct: 196 KVFRGRFRILLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQR 255
Query: 488 YFHEMRLKGMVPEPRT 503
F+EM +G++P T
Sbjct: 256 VFNEMIGEGVLPSVAT 271
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 180/353 (50%), Gaps = 20/353 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N +++ L R RFV + V +M PD+V T L+N + + V +AI +
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV---TVSSLINGFCQGNRVFDAIDLVS 163
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
+ +E G D+ + ++ C+ V + E F E++ D T N ++ G C G
Sbjct: 164 KMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+A R +D++ P+ +T+ ++ K+GK A++L++ M + PDV T N
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I+ LC R+ EA ++L M +GCLP+V TYN+LI CK KR++ + EM Q+
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 392 NGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVIL-KLYVNWDCE 447
+ + IT+N +++ +P+ + RM+ + + TY+++L L +NW E
Sbjct: 344 --GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVE 398
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
K +E M+K + D +Y ++IHG+ G +EDA F + KG+ P+
Sbjct: 399 -KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 450
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 8/347 (2%)
Query: 163 LDVLGRARRFVELIQVFDEMPDLVN--EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
+ + +A +F+ L + P +V + +G + ++ +EE I +F + + L
Sbjct: 7 ISIASKANKFLNLCLLQKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPL 66
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
+ F +L + + K+ ++ + F E G+D+ + NI++N C A
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
++K EPD VT ++ +N + ++ A+ L M E G +PDVV N IID C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ +A+E+ M+ G + TYNSL+ LC R + +M ++ +PN
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD--IVPNV 244
Query: 400 ITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
ITF ++ K E + E M R TYN ++ D+ + +
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
M KG PD +Y +I+G R+++ F EM +G+V + T
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 13/231 (5%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
D P F A++DV + +F E +++++EM PD+ TY L+N V
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF---TYNSLINGLCMHGRV 295
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNII 263
+EA + D G L D+ + L+ C+ K V E + F E + D T N I
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G+ G A+ + + P+ TY+ + L ++ AL LF+ M +
Sbjct: 356 IQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+ D+ T N +I +C + +A ++ R + +G P+V +Y ++I C+
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 184/368 (50%), Gaps = 8/368 (2%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VN 187
R+ + + FF W S + +N +LD+ G+ R+F V D M +
Sbjct: 153 RHGIPFLQSLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEIT 212
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
T+ L+ RY A + EA+ F+R +++G D+ AF ++ LC+ + A++FF+
Sbjct: 213 VHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFD 272
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
S K+ F D+ +++GWC G++ +A+ + D+ + +P+ TY+ +++L + G+
Sbjct: 273 SLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQ 332
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A +F M + G P+ VT N ++ R + L+V +MK GC + +YN
Sbjct: 333 ITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNF 392
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMER 424
+I+ C+ + +E + L+ M +K + PN TFN++ + K +V + RM+
Sbjct: 393 IIESHCRDENLEEAAKILNLMVKKGVA--PNASTFNFIFGCIAKLHDVNGAHRMYARMKE 450
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
C+ +T TYN++++++ D V +EM++ + P+ +Y ++I D +
Sbjct: 451 LNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNN 510
Query: 485 ALSYFHEM 492
A EM
Sbjct: 511 AYKLMMEM 518
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
Query: 282 DIIKSKCEPDSV-TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
D++KS+ +V T++ V + G A+ F M + G PD+V + +I +LC K
Sbjct: 202 DLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKK 261
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
+R EA +K+R P+V Y SL+ C+ + E +M K PN
Sbjct: 262 RRANEAQSFFDSLKHR-FEPDVVVYTSLVHGWCRAGDISKAEEVFSDM--KMAGIKPNVY 318
Query: 401 TFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T++ ++ SL + ++ V M GC + T+N +++++V +KV + +M
Sbjct: 319 TYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQM 378
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ G D SY +I LE+A + M KG+ P T
Sbjct: 379 KRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNAST 424
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 9/278 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A +FF S + + P V+ +++ RA + +VF +M N TY I++
Sbjct: 267 AQSFFD--SLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVI 324
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFG 254
+ + A VF + G + F +L+ + E V + + + ++
Sbjct: 325 DSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCP 384
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D + N I+ C N+ EA + ++K P++ T+ + K + A R+
Sbjct: 385 ADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRM 444
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+ M E +P+ +T N ++ + L++ +EM PNV TY LI C
Sbjct: 445 YARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCD 504
Query: 375 IKRMETVYEYLDEMEQKNGSCL-PNEITFNYLLKSLKK 411
+K Y+ + EM ++ CL PN + +L+ L+K
Sbjct: 505 MKHWNNAYKLMMEMVEEK--CLRPNLSVYETVLELLRK 540
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 414 EVPW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
++ W V++ M+ G +++ T++ +++ YV + H + ME G PD +++++
Sbjct: 195 DLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIV 254
Query: 473 IHGLYDKGRLEDALSYFHEMR 493
I L K R +A S+F ++
Sbjct: 255 ISSLCKKRRANEAQSFFDSLK 275
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 180/353 (50%), Gaps = 20/353 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N +++ L R RFV + V +M PD+V T L+N + + V +AI +
Sbjct: 48 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV---TVSSLINGFCQGNRVFDAIDLVS 104
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
+ +E G D+ + ++ C+ V + E F E++ D T N ++ G C G
Sbjct: 105 KMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 164
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+A R +D++ P+ +T+ ++ K+GK A++L++ M + PDV T N
Sbjct: 165 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 224
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I+ LC R+ EA ++L M +GCLP+V TYN+LI CK KR++ + EM Q+
Sbjct: 225 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 284
Query: 392 NGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVIL-KLYVNWDCE 447
+ + IT+N +++ +P+ + RM+ + + TY+++L L +NW E
Sbjct: 285 --GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVE 339
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
K +E M+K + D +Y ++IHG+ G +EDA F + KG+ P+
Sbjct: 340 -KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 391
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 6/288 (2%)
Query: 220 LDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKR 278
L + F +L + + K+ ++ + F E G+D+ + NI++N C A
Sbjct: 7 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 66
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
++K EPD VT ++ +N + ++ A+ L M E G +PDVV N IID C
Sbjct: 67 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
+ +A+E+ M+ G + TYNSL+ LC R + +M ++ +PN
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD--IVPN 184
Query: 399 EITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
ITF ++ K E + E M R TYN ++ D+ + +
Sbjct: 185 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 244
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
M KG PD +Y +I+G R+++ F EM +G+V + T
Sbjct: 245 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 292
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 13/231 (5%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
D P F A++DV + +F E +++++EM PD+ TY L+N V
Sbjct: 180 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF---TYNSLINGLCMHGRV 236
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
+EA + D G L D+ + L+ C+ K V+ F E + D T N I
Sbjct: 237 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 296
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G+ G A+ + + P+ TY+ + L ++ AL LF+ M +
Sbjct: 297 IQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 353
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+ D+ T N +I +C + +A ++ R + +G P+V +Y ++I C+
Sbjct: 354 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 404
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 44/294 (14%)
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+I+S+ P V ++ ++ + K + LF M G D+ + N +I+ LC R
Sbjct: 1 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
AL V+ +M G P+V T +SLI C+ R+ + + +ME+ P+ + +
Sbjct: 61 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR--PDVVIY 118
Query: 403 NYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYN------------------------ 435
N ++ K + + +RMER+G + TYN
Sbjct: 119 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 178
Query: 436 -----------VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
++ ++V + +EEM ++ + PD +Y +I+GL GR+++
Sbjct: 179 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 238
Query: 485 ALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVIK-LTSLGLKGNA 536
A M KG +P+ T L+N +R ++G K+ + + GL G+
Sbjct: 239 AKQMLDLMVTKGCLPDVVTYNTLIN--GFCKSKRVDEGTKLFREMAQRGLVGDT 290
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 181/360 (50%), Gaps = 17/360 (4%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
+Y P + FN ++ L + E + + D M PDL TYG ++N +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF---TYGTVVNGLCKRGDI 236
Query: 205 EEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNI 262
+ A+ + ++ E G+++ D+ + ++ LC YK+V A F E + ++ T N
Sbjct: 237 DLALSLL-KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ C G +A R D+I+ K P+ VT++ ++A K+GKL A +L+ M ++
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PD+ T + +I+ C R+ EA + M ++ C PNV TYN+LIK CK KR+E
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILK 439
E EM Q+ + N +T+N L++ L + + + ++M +G TY+++L
Sbjct: 416 ELFREMSQR--GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +K +E ++K M PD +Y +MI G+ G++ED F + LKG+ P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 174/392 (44%), Gaps = 61/392 (15%)
Query: 160 NAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
N +LD+ + + + +F EM P +V + LL+ A + + I + +R
Sbjct: 54 NVLLDL-----KLDDAVDLFGEMVQSRPLPSIVE---FNKLLSAIAKMNKFDLVISLGER 105
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWC--- 268
+ DL ++ L+ CR + +A + + GY DI T++ +LNG+C
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVL-GKMMKLGYEPDIVTLSSLLNGYCHGK 164
Query: 269 --------------------------------VLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
+ EA ++ C+PD TY
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
T VN L K+G + AL L + M EKG+ + DVV IIDALC K + +AL + EM N
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
+G PNV TYNSLI+ LC R L +M ++ + PN +TF+ L+ + K ++
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN--PNVVTFSALIDAFVKEGKL 341
Query: 416 PWVLERMERNGCKMSTD----TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
E++ K S D TY+ ++ + D D+ +H +E M K P+ +Y
Sbjct: 342 VEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+I G R+E+ + F EM +G+V T
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 143/313 (45%), Gaps = 15/313 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + VE +++DEM PD+ TY L+N + ++E
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF---TYSSLINGFCMHDRLDE 378
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F+ ++ + L+ C+ K VE E F E + + T N ++
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G+ A++ +K ++ PD +TY+ ++ L K GKL AL +F+ + + +P
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T N +I+ +C ++ + ++ + +G PNV Y ++I C+ E
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 386 DEMEQKNGSCLPNEITFNYLLKS-LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
EM K LPN T+N L+++ L+ ++ E C D + + +N
Sbjct: 559 REM--KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI--SMVINM 614
Query: 445 DCEDKVRHTWEEM 457
+ ++ ++ EM
Sbjct: 615 LHDGRLEKSYLEM 627
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 42/244 (17%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEK 189
R D EA + F +S+ D P +N ++ +A+R E +++F EM + N
Sbjct: 375 RLD-EAKHMFELMISK--DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY L+ A + A +F + G D+ + LL LC+Y +E A FE
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVY---------------------------------- 274
+K++ DI T NI++ G C G V
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 275 -EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA ++++ + P+S TY T + A + G + L + M G D T + +
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Query: 334 IDAL 337
I+ L
Sbjct: 612 INML 615
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 181/360 (50%), Gaps = 17/360 (4%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
+Y P + FN ++ L + E + + D M PDL TYG ++N +
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF---TYGTVVNGLCKRGDI 220
Query: 205 EEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNI 262
+ A+ + ++ E G+++ D+ + ++ LC YK+V A F E + ++ T N
Sbjct: 221 DLALSLL-KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 279
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ C G +A R D+I+ K P+ VT++ ++A K+GKL A +L+ M ++
Sbjct: 280 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 339
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PD+ T + +I+ C R+ EA + M ++ C PNV TYN+LIK CK KR+E
Sbjct: 340 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 399
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILK 439
E EM Q+ + N +T+N L++ L + + + ++M +G TY+++L
Sbjct: 400 ELFREMSQR--GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 457
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +K +E ++K M PD +Y +MI G+ G++ED F + LKG+ P
Sbjct: 458 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 517
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 174/392 (44%), Gaps = 61/392 (15%)
Query: 160 NAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
N +LD+ + + + +F EM P +V + LL+ A + + I + +R
Sbjct: 38 NVLLDL-----KLDDAVDLFGEMVQSRPLPSIVE---FNKLLSAIAKMNKFDLVISLGER 89
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWC--- 268
+ DL ++ L+ CR + +A + + GY DI T++ +LNG+C
Sbjct: 90 MQNLRISYDLYSYNILINCFCRRSQLPLALAVL-GKMMKLGYEPDIVTLSSLLNGYCHGK 148
Query: 269 --------------------------------VLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
+ EA ++ C+PD TY
Sbjct: 149 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 208
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
T VN L K+G + AL L + M EKG+ + DVV IIDALC K + +AL + EM N
Sbjct: 209 TVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 267
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
+G PNV TYNSLI+ LC R L +M ++ + PN +TF+ L+ + K ++
Sbjct: 268 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN--PNVVTFSALIDAFVKEGKL 325
Query: 416 PWVLERMERNGCKMSTD----TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
E++ K S D TY+ ++ + D D+ +H +E M K P+ +Y
Sbjct: 326 VEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 384
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+I G R+E+ + F EM +G+V T
Sbjct: 385 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 416
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 143/313 (45%), Gaps = 15/313 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + VE +++DEM PD+ TY L+N + ++E
Sbjct: 306 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF---TYSSLINGFCMHDRLDE 362
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F+ ++ + L+ C+ K VE E F E + + T N ++
Sbjct: 363 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 422
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G+ A++ +K ++ PD +TY+ ++ L K GKL AL +F+ + + +P
Sbjct: 423 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 482
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T N +I+ +C ++ + ++ + +G PNV Y ++I C+ E
Sbjct: 483 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 542
Query: 386 DEMEQKNGSCLPNEITFNYLLKS-LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
EM K LPN T+N L+++ L+ ++ E C D + + +N
Sbjct: 543 REM--KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI--SMVINM 598
Query: 445 DCEDKVRHTWEEM 457
+ ++ ++ EM
Sbjct: 599 LHDGRLEKSYLEM 611
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 42/244 (17%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEK 189
R D EA + F +S+ D P +N ++ +A+R E +++F EM + N
Sbjct: 359 RLD-EAKHMFELMISK--DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 415
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY L+ A + A +F + G D+ + LL LC+Y +E A FE
Sbjct: 416 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 475
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVY---------------------------------- 274
+K++ DI T NI++ G C G V
Sbjct: 476 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 535
Query: 275 -EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA ++++ + P+S TY T + A + G + L + M G D T + +
Sbjct: 536 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 595
Query: 334 IDAL 337
I+ L
Sbjct: 596 INML 599
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 206/410 (50%), Gaps = 19/410 (4%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFD----WEAAYTFFKWVSREGDY-SPGS 156
S S+ ++++L + L++DLI V+ R RF +A F+ +R+G Y +P S
Sbjct: 48 SSSSVQNLKQSLTSTGIFLSNDLIDKVLKRVRFSHGNPLQALEFFYYTDNRKGFYHTPYS 107
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPD----LVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+ IL +LGR+R+F + V +M L++ +T I+L R A V + + F
Sbjct: 108 --LDTILYILGRSRKFDHIWDVLIKMKRKDRFLISPRTMQIVLARVAKLCSVRQTVESFR 165
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGN 272
+ K+F + D + F LL LC+ K + A + K EF +++T NI+L+GW
Sbjct: 166 KFKKFVSVLDTTCFNALLRTLCQEKSMTDARNVYHRLKKEFKPNLQTFNILLSGW---KQ 222
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
EA+ F++++ + +PD V+Y + ++ K ++ A ++ + M E+ PDV+T
Sbjct: 223 SEEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISPDVITYTS 282
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
II L + +A ++L EMK GC P+V YN++I++ C KR+ +DEM K
Sbjct: 283 IIGGLGLVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKG 342
Query: 393 GSCLPNEITFNYLLKSLKKPEEV--PWVL-ERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
S PN T+N + ++ W L RM +GC +T + +++L+ + +
Sbjct: 343 LS--PNATTYNLFFRVFYWSNDLRNSWSLYRRMMESGCLPNTQSCMFLIRLFRKHEKVEM 400
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
W +M +KG G V+ L D G+L +A F +M KG P
Sbjct: 401 ALTLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKCFLQMIEKGHKP 450
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 120/261 (45%), Gaps = 9/261 (3%)
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K+ F +TM I+L L +V + ++ K D+ + + L ++ +
Sbjct: 134 KDRFLISPRTMQIVLARVAKLCSVRQTVESFRKFKKFVSVLDTTCFNALLRTLCQEKSMT 193
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A ++ + +K KP++ T N ++ K+ EA EM+ G P+V +YNSLI
Sbjct: 194 DARNVYHRL-KKEFKPNLQTFNILLSGW---KQSEEAELFFEEMRELGIKPDVVSYNSLI 249
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNG 426
CK + ME Y+ +++M +++ S P+ IT+ ++ L +P++ +L M+ G
Sbjct: 250 DVYCKDREMEKAYKVVEKMREEDIS--PDVITYTSIIGGLGLVGQPDKARDILNEMKEYG 307
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
C YN +++ Y + +EM KG+ P+ +Y + Y L ++
Sbjct: 308 CYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKGLSPNATTYNLFFRVFYWSNDLRNSW 367
Query: 487 SYFHEMRLKGMVPEPRTGILV 507
S + M G +P ++ + +
Sbjct: 368 SLYRRMMESGCLPNTQSCMFL 388
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 3/194 (1%)
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ + +E R+ K + + T +N+L++ LC+ K M ++++ PN TF
Sbjct: 157 VRQTVESFRKFKKFVSVLDTTCFNALLRTLCQEKSMTDARNVYHRLKKEFK---PNLQTF 213
Query: 403 NYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
N LL K+ EE E M G K +YN ++ +Y +K E+M ++ +
Sbjct: 214 NILLSGWKQSEEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDI 273
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
PD +YT +I GL G+ + A +EM+ G P+ V K G+
Sbjct: 274 SPDVITYTSIIGGLGLVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASN 333
Query: 523 KVIKLTSLGLKGNA 536
+ ++ S GL NA
Sbjct: 334 LMDEMASKGLSPNA 347
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 104/236 (44%), Gaps = 11/236 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A FF+ + RE P +N+++DV + R + +V ++M PD++ T
Sbjct: 224 EEAELFFEEM-RELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISPDVI---T 279
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESE 249
Y ++ ++A + + KE+G D++A+ ++ C K + A E
Sbjct: 280 YTSIIGGLGLVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMA 339
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ T N+ + ++ + ++ +++S C P++ + + K K+
Sbjct: 340 SKGLSPNATTYNLFFRVFYWSNDLRNSWSLYRRMMESGCLPNTQSCMFLIRLFRKHEKVE 399
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
AL L+ M EKG ++ + + D LC ++ EA + +M +G P+ ++
Sbjct: 400 MALTLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKCFLQMIEKGHKPSNVSF 455
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 179/366 (48%), Gaps = 17/366 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P S FN ++ L R R E + + D M PDLV TYGI++N
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLV---TYGIVVNGLCKRG 235
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLL-WLCRYKHVEVAETFF-ESEKNEFGYDIKTM 260
++ A+ + ++ E G+++ N ++ LC YK+V A F E + ++ T
Sbjct: 236 DIDLALSLL-KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N ++ C G +A R D+I+ K P+ VT++ ++A K+GKL A +L+ M +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+ PD+ T + +I+ C R+ EA + M ++ C PNV TYN+LIK CK KR++
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLERMERNGCKMSTDTYNVI 437
E EM Q+ + N +T+ L+ + E V ++M +G TY+++
Sbjct: 415 GMELFREMSQR--GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
L N + +E +++ M PD +Y +MI G+ G++ED F + LKG+
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 498 VPEPRT 503
P T
Sbjct: 533 KPNVVT 538
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 169/354 (47%), Gaps = 13/354 (3%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
F+ +L + + +F +I + ++M +L N TY IL+N + + A+ V +
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G D+ +LL C + A + + E GY D T N +++G
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLV-GQMVEMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA ++ C+PD VTY VN L K+G + AL L + M + +P VV N I
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
IDALC K + +AL + EM N+G PNV TYNSLI+ LC R L +M ++
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD----TYNVILKLYVNWDCEDK 449
+ PN +TF+ L+ + K ++ E++ K S D TY+ ++ + D D+
Sbjct: 323 N--PNVVTFSALIDAFVKEGKLVEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+H +E M K P+ +Y +I G R+++ + F EM +G+V T
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 5/211 (2%)
Query: 164 DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
D L A+ EL+ D P++V TY L+ + A V+E + +F + G + +
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVV---TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ L+ + + + A+ F+ ++ DI T +I+L+G C G V A ++
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ +SK EPD TY + + K GK+ LF ++ KG KP+VVT ++ C K
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIK-HL 372
EA + REMK G LP+ TYN+LI+ HL
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 125/263 (47%), Gaps = 12/263 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + VE +++DEM PD+ TY L+N + ++E
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF---TYSSLINGFCMHDRLDE 379
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILN 265
A +F+ ++ + L+ C+ K V E E F E + + T +++
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ A+ +K ++ PD +TY+ ++ L GK+ TAL +F+ + +P
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T N +I+ +C ++ + ++ + +G PNV TY +++ C+ E
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 386 DEMEQKNGSCLPNEITFNYLLKS 408
EM+++ LP+ T+N L+++
Sbjct: 560 REMKEEGP--LPDSGTYNTLIRA 580
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 13/236 (5%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + D++KS+ P V ++ ++A+ K K + L + M G ++ T + +I
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C + ++ AL VL +M G P++ T NSL+ C R+ + +M +
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE---- 447
P+ TFN L+ L + E +++RM GC+ TY ++ VN C+
Sbjct: 184 --PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV----VNGLCKRGDI 237
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D ++ME+ + P Y +I L + + DAL+ F EM KG+ P T
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 191/399 (47%), Gaps = 9/399 (2%)
Query: 112 ALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARR 171
AL+ + L+ V+NR+ DW A FFKW + Y + N ++D+LG+ +
Sbjct: 114 ALDGLSFQPSSGLVSQVLNRFSNDWVPALGFFKWAKSQTGYRHSPELCNLMVDILGKCKS 173
Query: 172 FVELIQVFDEMPDL----VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
F + + +EM L V +T ++ R A A E+AI F R +FG D +A
Sbjct: 174 FDPMSDLVEEMAKLEQGYVTLETMAKVIRRLAKARKHEDAIEAFRRMDKFGVNKDTAALN 233
Query: 228 NLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
L+ L + VE A K + N++++GWC A++ +D+ +
Sbjct: 234 VLIDALVKGDSVEHAHKVVLEFKGLIPLSSHSFNVLMHGWCRARKFDNARKAMEDMKELG 293
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
EPD +Y +F+ A + ++ + M E G P+ VT ++ L ++ +AL
Sbjct: 294 FEPDVFSYTSFIEAYCHERDFRKVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQLSKAL 353
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
EV +MK GC+ + Y+ +I L K R++ + ++M ++ + + +T+N ++
Sbjct: 354 EVYEKMKCDGCVADTPVYSCMIFILGKAGRLKDACDVFEDMPKQG--VVRDVVTYNTMIS 411
Query: 408 SL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
+ + E +L+ ME CK + TY+ +LK+ ++ + M K + P
Sbjct: 412 TACAHSREETALRLLKEMEDGSCKPNVGTYHPLLKMCCKKKRMKVLKFLLDHMFKNDISP 471
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D +Y+++++ L G++ DA S+ EM LKG P+P T
Sbjct: 472 DLATYSLLVNALCKTGKVADAYSFLEEMVLKGFTPKPST 510
>gi|449437378|ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
gi|449503560|ref|XP_004162063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
Length = 615
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 141/520 (27%), Positives = 237/520 (45%), Gaps = 43/520 (8%)
Query: 5 FRQLKRIYREHFQQKFKFHSQLTTQFSKLQSCNSV-TSHKTLI--PIINLQARNSEFLFL 61
+R L I H F+F + QFS L + + T K L+ P + Q N
Sbjct: 11 YRILHSIQHNH-PSSFRFSA---LQFSSLSPHSWLSTPGKPLVKWPSLPDQPANP----- 61
Query: 62 GRIETAQLVHSLANS--DEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELT 119
+ + V S NS D K E P D I+ +IL SV +E AL++ +
Sbjct: 62 --LPSNSAVISNPNSAIDVKFEASYSPNDLSTIS--SILSDRSVRPGAALEDALDRTGIV 117
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
+ L+ V + + + ++ F W +++ + P + +FN +++VL ++R F +
Sbjct: 118 PSSSLLEAVFDHFDSSPKFLHSLFLWAAKKSGFRPSAALFNRLINVLAKSREFDSAWSLI 177
Query: 180 ------DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG-ELDDLSA------F 226
E LV+ + + IL+ RYA A MV+ AI R EF L+ +S F
Sbjct: 178 TSRLRGGEESFLVSVEVFVILIRRYARAGMVQPAI----RTYEFACNLETISGTGSEGLF 233
Query: 227 QNLLLWLCRYKHVEVAETFFESEK---NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
+ LL LC+ HV VA +F ++ + F I+ NI++NGW + A+R W ++
Sbjct: 234 EILLDSLCKEGHVRVASEYFNRKREMGSSFEPSIRAYNILINGWFRSRKLKHAQRLWFEM 293
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
K+K P VTY T + + + A+ L M +G +P+ + N I+DAL R
Sbjct: 294 KKNKISPTVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAGRF 353
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
EAL ++ P ++TYNSL+K CK + + L M + + P T+N
Sbjct: 354 KEALGMMERFMVLEQGPTISTYNSLVKGYCKAGDLSGASKILKMMIGRGFT--PTPTTYN 411
Query: 404 YLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
Y + K EE + +M +G TY+++LK+ + + EM+ +
Sbjct: 412 YFFRFFSKYGKIEESMSLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAVQVCNEMKAR 471
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
G D + T+++H L + E+A + F M +G+VP+
Sbjct: 472 GFDMDLATSTMLMHLLCKMHKFEEAFAEFEHMIHRGIVPQ 511
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 181/370 (48%), Gaps = 16/370 (4%)
Query: 164 DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
+ L AR+ +E ++ PD V Y LLN + +EE + + E G D
Sbjct: 176 NALDEARKLMEKMKESGLTPDTV---AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDT 232
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
++ ++ LC E A E + + G D+ T N +++G+C + + EA+R +D
Sbjct: 233 FSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLED 292
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
++ +C P +TY T + ++ +L A R+ + M++ G PD+VT NC++D LC +
Sbjct: 293 MVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGK 352
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ EA E+L M + C P+V TY+ L+ LCK+ +++ L+ M ++ C PN +TF
Sbjct: 353 LEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERG--CQPNLVTF 410
Query: 403 NYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
N ++ K +V VLE M+ C TY+ ++ Y K +
Sbjct: 411 NTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYC------KANRMQDAFAI 464
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
G+ PD+ SY+ M+ GL G++E+A M +G P L+ + ERG+
Sbjct: 465 LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDV-ERGD 523
Query: 520 QGKKVIKLTS 529
+ K++++ S
Sbjct: 524 EALKMLQVMS 533
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 183/398 (45%), Gaps = 50/398 (12%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMV 204
+E +P + +NA+L+ L + + E+ ++ +EM + E +Y ++ +
Sbjct: 189 KESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKY 248
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE--------------- 249
EEA + ++ E D+ + +L+ C+ ++ AE E
Sbjct: 249 EEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTL 308
Query: 250 ---------------------KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
K D+ T N +L+G C G + EA + +++ C
Sbjct: 309 IGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDC 368
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
PD VTY+ VN L K GK+ A L + M E+G +P++VT N +ID C ++ E +
Sbjct: 369 APDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHK 428
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
VL MK C P+V TY++LI CK RM+ + L P++ +++ +L+
Sbjct: 429 VLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL--------GISPDKASYSSMLEG 480
Query: 409 L---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L K EE V++ M + GC ++ Y +I+ + + D+ + M ++G P+
Sbjct: 481 LCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPN 540
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+Y+++I+GL R+EDA++ M KG VP+ T
Sbjct: 541 LYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVAT 578
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 173/390 (44%), Gaps = 44/390 (11%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
P +N+++D + + E ++ ++M P ++ TY L+ ++ A + +
Sbjct: 264 GPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVI---TYTTLIGGFSRADRLAD 320
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILN 265
A V + + G DL + LL LC+ +E A E + + D+ T +I++N
Sbjct: 321 AYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVN 380
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C LG V +A+ + +++ C+P+ VT+ T ++ K GK+ ++ + M E P
Sbjct: 381 GLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTP 440
Query: 326 DVVTCNCIIDA-----------------------------LCFKKRIPEALEVLREMKNR 356
DVVT + +ID LC ++ EA EV+ M +
Sbjct: 441 DVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQ 500
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPE 413
GC P + Y +I LC ++R + + L M ++ C PN T++ L+ L K+ E
Sbjct: 501 GCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERG--CEPNLYTYSILINGLCKTKRVE 558
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
+ VL+ M GC TY ++ + + D ++ M G PD+ +Y ++I
Sbjct: 559 DAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILI 618
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G G +E A+ M KG P+ T
Sbjct: 619 SGFCQSGNVEKAIEVMQLMLEKGCNPDAAT 648
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 189/432 (43%), Gaps = 50/432 (11%)
Query: 139 AYTFFKWVSREGDYS-PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT- 190
Y+FF+ R D S P ++ + A++ RA ++++ +EM PD++ T
Sbjct: 8 GYSFFR--ERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTI 65
Query: 191 -----------------------------YGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
Y IL++ ++EA + D +
Sbjct: 66 LKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHP 125
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D + + L+ LC+ ++ A + + D+ T ++ G C + EA++
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLM 185
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+ + +S PD+V Y +N L K+ +L +L + M E GR+PD + N ++ LC
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
+ EA ++L +M + C P+V TYNSL+ CK+ +M+ L++M + C P I
Sbjct: 246 GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR--CAPTVI 303
Query: 401 TFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T+ L+ + + + V+E M + G TYN +L ++ E M
Sbjct: 304 TYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVM 363
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517
+K PD +Y+++++GL G+++DA M +G P T N M +
Sbjct: 364 VEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVT---FNTMIDGFCKA 420
Query: 518 G--EQGKKVIKL 527
G ++G KV++L
Sbjct: 421 GKVDEGHKVLEL 432
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 143/303 (47%), Gaps = 19/303 (6%)
Query: 146 VSREGDYSPGSNVFNAILDVLGR------ARRFVELIQVFDEMPDLVNEKTYGILLNRYA 199
V E D +P ++ +++ L + AR +E++ P+LV T+ +++ +
Sbjct: 362 VMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLV---TFNTMIDGFC 418
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKT 259
A V+E V + KE D+ + L+ C+ ++ A ++ Y
Sbjct: 419 KAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASY---- 474
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
+ +L G C G V EA+ + K C P S YA + L + AL++ Q M
Sbjct: 475 -SSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMS 533
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
E+G +P++ T + +I+ LC KR+ +A+ VL M +GC+P+V TY SLI CKI +M+
Sbjct: 534 ERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMD 593
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME---RNGCKMSTDTYNV 436
Y+ M ++ C P+++ +N L+ + V +E M+ GC TY
Sbjct: 594 AAYQCFKTM--RDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFS 651
Query: 437 ILK 439
+++
Sbjct: 652 LMR 654
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 157/348 (45%), Gaps = 22/348 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE---LIQVF---DEMPDLVNEKTYG 192
AY + + + G SP +N +LD L +A + E L++V D PD+V TY
Sbjct: 321 AYRVMEDMFKAG-ISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVV---TYS 376
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN- 251
IL+N V++A + + E G +L F ++ C+ V+ E K
Sbjct: 377 ILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV 436
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
D+ T + +++G+C +A R PD +Y++ + L GK+ A
Sbjct: 437 SCTPDVVTYSTLIDGYC------KANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEA 490
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ M ++G P II LC +R EAL++L+ M RGC PN+ TY+ LI
Sbjct: 491 QEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILING 550
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCK 428
LCK KR+E LD M +K C+P+ T+ L+ + K + + M +GC+
Sbjct: 551 LCKTKRVEDAINVLDVMLEKG--CVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCE 608
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
YN+++ + +K + M +KG PD +Y ++ L
Sbjct: 609 PDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 7/229 (3%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
E F+++ +P + TY + ++ G L + M + PDV+T N I+
Sbjct: 7 EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
A C + AL R C P TY LI LC+ +R++ Y+ LDEM QK+
Sbjct: 67 KAYCQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKD-- 122
Query: 395 CLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
C P+ +N L+ L K ++ VL+ M C TY ++ + D+ R
Sbjct: 123 CHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEAR 182
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
E+M++ G+ PD +Y +++GL + +LE+ EM G P+
Sbjct: 183 KLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPD 231
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLG---RARRFVELIQVFDEMPDLVNEKTYGI 193
E A ++++G P S+ + I+ L R ++++QV E N TY I
Sbjct: 488 EEAQEVMDLMTKQG-CPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSI 546
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES----- 248
L+N VE+AI V D E G + D++ + +L+ C+ ++ A F++
Sbjct: 547 LINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSG 606
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
E ++ Y NI+++G+C GNV +A + +++ C PD+ TY + + +LT
Sbjct: 607 CEPDKLAY-----NILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLT 657
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 3/163 (1%)
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
K R E RE + P+ +TY +LI + + V E +EM + S P+
Sbjct: 1 MKVRPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFS--PD 58
Query: 399 EITFNYLLKSLKKPEEVPWVLERME-RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
IT N +LK+ + ++ L + C + TY +++ D+ +EM
Sbjct: 59 VITHNTILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEM 118
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+K PD Y +I GL G+++ A + M + VP+
Sbjct: 119 IQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPD 161
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 181/354 (51%), Gaps = 9/354 (2%)
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDR 213
+ FN ++ L +A + I + +EMP +E T+ ++ Y ++ A+ + ++
Sbjct: 204 STFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQ 263
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGN 272
E+G L+ C+ ++ A +F + +E F D T N ++NG C +G+
Sbjct: 264 MVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGH 323
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
A ++ +PD TY + ++ L K G++ A+++ M + P+ VT N
Sbjct: 324 AKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNA 383
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
II +LC + R+ EA E+ R + ++G LP+V T+NSLI+ LC ++ + +EM+ K
Sbjct: 384 IISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKG 443
Query: 393 GSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
C P+E T+N L+ SL +K EE +L+ ME NGC + YN ++ + ++
Sbjct: 444 --CRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEE 501
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++EME +G+ D +Y +I GL R+EDA +M ++G+ P+ T
Sbjct: 502 AEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFT 555
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 160/353 (45%), Gaps = 41/353 (11%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
T +L+N + +++A+ G D + L+ LC+ H + A ++
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAM 334
Query: 250 K-NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
DI T N +++G C LG + EA + ++ C P++VTY +++L K+ ++
Sbjct: 335 LLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRV 394
Query: 309 G-----------------------------------TALRLFQAMWEKGRKPDVVTCNCI 333
+A+ LF+ M KG +PD T N +
Sbjct: 395 DEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNML 454
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
ID+LC +++ EAL +L+EM+ GC NV YN+LI CK KR+E E DEME +
Sbjct: 455 IDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGV 514
Query: 394 SCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
S + +T+N L+ L K+ E+ ++++M G + TYN +L + K
Sbjct: 515 S--RDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKA 572
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ M G PD +Y +I GL GR++ A +++KGMV P
Sbjct: 573 ADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHA 625
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 174/378 (46%), Gaps = 10/378 (2%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT 190
R + D AA F W S++ ++ P S+V+ IL LG+A F + +V +EM E
Sbjct: 72 RRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFD 131
Query: 191 YGILL---NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL-WLCRYKHVEVAETFF 246
GI L Y + +E +G+ ++ + + F N+LL L +++ E+
Sbjct: 132 RGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAH 191
Query: 247 ESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
S + +D+ T NI++ C V A +++ PD T+ T + +
Sbjct: 192 SSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEG 251
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G L ALR+ + M E G VT N +I+ C + RI +AL ++E + G P+ TY
Sbjct: 252 GNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTY 311
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERM 422
N+L+ LCKI + E +D M G P+ T+N L+ L K EE +L++M
Sbjct: 312 NTLVNGLCKIGHAKHAMEVVDAMLL--GGLDPDIYTYNSLISGLCKLGEIEEAVKILDQM 369
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
C + TYN I+ + D+ + KG+ PD ++ +I GL
Sbjct: 370 VSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNH 429
Query: 483 EDALSYFHEMRLKGMVPE 500
+ A+ F EM+ KG P+
Sbjct: 430 KSAMDLFEEMKGKGCRPD 447
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 165/364 (45%), Gaps = 20/364 (5%)
Query: 150 GDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEE 206
G P +N+++ L + E +++ D+M N TY +++ + V+E
Sbjct: 337 GGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDE 396
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK------NEFGYDIKTM 260
A + G L D+ F +L+ LC + + A FE K +EF Y
Sbjct: 397 ATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTY----- 451
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N++++ C + EA K++ + C + V Y T ++ K ++ A +F M
Sbjct: 452 NMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMEL 511
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G D VT N +ID LC KR+ +A +++ +M G P+ TYNSL+ H CK ++
Sbjct: 512 QGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKK 571
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVI 437
+ + M + C P+ +T+ L+ L K V +L ++ G ++ YN +
Sbjct: 572 AADIVQTM--TSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPV 629
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD-KGRLEDALSYFHEMRLKG 496
++ + + + EM K PD +Y ++ GL + G + +A+ + EM +G
Sbjct: 630 IQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERG 689
Query: 497 MVPE 500
+PE
Sbjct: 690 NIPE 693
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 117/278 (42%), Gaps = 40/278 (14%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++D L +R+ E + + EM N Y L++ + +EEA +
Sbjct: 446 PDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEI 505
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
FD + G D + L+ LC+ K VE A + E D T N +L +C
Sbjct: 506 FDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCK 565
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA------------------ 311
G++ +A + + S C PD VTYAT ++ L K G++ A
Sbjct: 566 TGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHA 625
Query: 312 -----------------LRLFQAMWEKGRKPDVVTCNCIIDALC-FKKRIPEALEVLREM 353
+RLF+ M +K PD +T + LC I EA++ EM
Sbjct: 626 YNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEM 685
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
RG +P +++ L + LC + +T+ + +D + +K
Sbjct: 686 IERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEK 723
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 168/330 (50%), Gaps = 8/330 (2%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETF 245
+E YG L+N +AI + + ++ G +L + ++ LC+ V E
Sbjct: 160 DEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLC 219
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII-KSKCEPDSVTYATFVNALTK 304
E D+ T N +++G+C G A R +++ K PD T+ V+AL K
Sbjct: 220 SEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCK 279
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
G + A +F M ++G +PDVV+CN +++ C + + EA EV M RG LPNV +
Sbjct: 280 LGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVIS 339
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLER 421
Y++LI CK+K ++ L EM Q+N +P+ +T+N LL L K V + ++E
Sbjct: 340 YSTLINGYCKVKMVDEALRLLTEMHQRN--LVPDTVTYNCLLDGLSKSGRVLYEWDLVEA 397
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M +G TYNV+L Y+ +C DK ++ + G+ P+ R+Y ++I GL GR
Sbjct: 398 MRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGR 457
Query: 482 LEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
++ A F + +KG P RT I++N +
Sbjct: 458 MKAAKEIFQLLSVKGCRPNIRTYNIMINGL 487
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 4/257 (1%)
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K FG D T+ ++ G C+ G +EA + + D V Y T +N L K GK
Sbjct: 119 KRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTR 178
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+ L + M + G +P+++ N ++D LC + + EA + EM +G +V TYNSLI
Sbjct: 179 DAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLI 238
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNG 426
C + + L+EM K P+ TFN L+ +L K E V M + G
Sbjct: 239 HGFCGAGQFQGAVRLLNEMVMKE-DVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRG 297
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ + N ++ + C + + ++ M ++G P+ SY+ +I+G +++AL
Sbjct: 298 LEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEAL 357
Query: 487 SYFHEMRLKGMVPEPRT 503
EM + +VP+ T
Sbjct: 358 RLLTEMHQRNLVPDTVT 374
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 12/281 (4%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
++ A + + D P FN ++D L + E VF M PD+V+
Sbjct: 247 FQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCN 306
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFES 248
L+N + + EA VFDR E G+L ++ ++ L+ C+ K V E E
Sbjct: 307 A---LMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEM 363
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ D T N +L+G G V + + S PD +TY ++ K+ L
Sbjct: 364 HQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECL 423
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL LFQ + + G P++ T N +ID LC R+ A E+ + + +GC PN+ TYN +
Sbjct: 424 DKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIM 483
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
I L + ++ L EM PN +TF+ L+++L
Sbjct: 484 INGLRREGLLDEAEALLLEMVDDGFP--PNAVTFDPLVRAL 522
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 176/357 (49%), Gaps = 12/357 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++ ++ + +QV + M PD+V TY +L + ++EA+ V
Sbjct: 175 PDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVV---TYNTILRSLCDSGKLKEAMEV 231
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCV 269
DR+ + D+ + L+ C V A E K D+ T N+++NG C
Sbjct: 232 LDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 291
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA +F ++ C+P+ +T+ + ++ G+ A RL M KG P VVT
Sbjct: 292 EGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVT 351
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I+ LC K+ + A++VL +M GC+PN +YN L+ C+ K+M+ EYL+ M
Sbjct: 352 FNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMV 411
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ C P+ +T+N LL +L K + +L ++ GC TYN ++
Sbjct: 412 SRG--CYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ EEM +KG+ PD +Y+ ++ GL +G++++A+ FH+M + P T
Sbjct: 470 TEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVT 526
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 160/335 (47%), Gaps = 12/335 (3%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNI 262
+EE + +R G++ D+ A +L+ CR A E +N D+ T N+
Sbjct: 123 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNV 182
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ G+C G + +A + + + PD VTY T + +L GKL A+ + ++
Sbjct: 183 LIGGYCKSGEIDKALQVLE---RMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRE 239
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDV+T +I+A C + +A+++L EM+ +GC P+V TYN LI +CK R++
Sbjct: 240 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 299
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILK 439
++L+ M C PN IT N +L+S+ + +L M R GC S T+N+++
Sbjct: 300 KFLNNMPLYG--CQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILIN 357
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ E+M K G P+ SY ++HG + +++ A+ Y M +G P
Sbjct: 358 FLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 417
Query: 500 EPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKG 534
+ T N + L + G+ V L L KG
Sbjct: 418 DIVT---YNTLLTALCKDGKADAAVEILNQLSSKG 449
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 170/375 (45%), Gaps = 58/375 (15%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P +N IL L + + E ++V D PD++ TY IL+ V +
Sbjct: 206 APDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVI---TYTILIEATCNDSGVGQ 262
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
A+ + D ++ G D+ + L+ +C+ ++ A F + +G ++ T NIIL
Sbjct: 263 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMP-LYGCQPNVITHNIIL 321
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C G +A+R D+++ C P VT+ +N L +K LG A+ + + M + G
Sbjct: 322 RSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCM 381
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+ ++ N ++ C +K++ A+E L M +RGC P++ TYN+L+ LCK + + E
Sbjct: 382 PNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEI 441
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLY 441
L+++ K C P IT+N ++ L K E +LE M R G K TY+ +L+
Sbjct: 442 LNQLSSKG--CSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLR-- 497
Query: 442 VNWDCEDKVRHT---WEEME-----------------------------------KKGMG 463
CE KV + +ME +KG
Sbjct: 498 -GLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCK 556
Query: 464 PDQRSYTVMIHGLYD 478
P + +YT++I G+ D
Sbjct: 557 PTKATYTILIEGIAD 571
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 8/201 (3%)
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L + G+L L+ + M +G PDV+ C +I C + +A ++ ++N G +P+
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V TYN LI CK ++ + L+ M S P+ +T+N +L+SL K +E V
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERM-----SVAPDVVTYNTILRSLCDSGKLKEAMEV 231
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L+R + C TY ++++ N + +EM KKG PD +Y V+I+G+
Sbjct: 232 LDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 291
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
+GRL++A+ + + M L G P
Sbjct: 292 EGRLDEAIKFLNNMPLYGCQP 312
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 164/359 (45%), Gaps = 24/359 (6%)
Query: 65 ETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQ-----C--E 117
++ +L ++ D + + + YP D I + I TC+ S G+ K L++ C +
Sbjct: 221 DSGKLKEAMEVLDRQMQRECYP-DVITYTIL-IEATCNDSGVGQAMKLLDEMRKKGCKPD 278
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
+ + LI + R D A F + G P N IL + R+++ +
Sbjct: 279 VVTYNVLINGICKEGRLD--EAIKFLNNMPLYG-CQPNVITHNIILRSMCSTGRWMDAER 335
Query: 178 VFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
+ +M P +V T+ IL+N ++ AI V ++ + G + + ++ LL
Sbjct: 336 LLADMLRKGCSPSVV---TFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLH 392
Query: 232 WLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
C+ K ++ A + E + Y DI T N +L C G A + C P
Sbjct: 393 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSP 452
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+TY T ++ LTK GK A L + M KG KPD++T + ++ L + ++ EA+++
Sbjct: 453 VLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIF 512
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+M+ P+ TYN+++ LCK ++ ++L M +K C P + T+ L++ +
Sbjct: 513 HDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG--CKPTKATYTILIEGI 569
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 14/261 (5%)
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
EF +I ++ NG + E +F + +I PD + + + + GK A
Sbjct: 107 EFASNIHLRKLVRNG-----ELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKA 161
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
R+ + + G PDV+T N +I C I +AL+VL M P+V TYN++++
Sbjct: 162 TRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRS 218
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCK 428
LC +++ E LD Q+ C P+ IT+ L+++ V +L+ M + GCK
Sbjct: 219 LCDSGKLKEAMEVLDRQMQRE--CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCK 276
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TYNV++ D+ M G P+ ++ +++ + GR DA
Sbjct: 277 PDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERL 336
Query: 489 FHEMRLKGMVPEPRT-GILVN 508
+M KG P T IL+N
Sbjct: 337 LADMLRKGCSPSVVTFNILIN 357
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 171/341 (50%), Gaps = 9/341 (2%)
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
G + +E+++ PD+V TY +L + ++EA+ V DR+ + D+ +
Sbjct: 190 GEIDKALEVLERMSVAPDVV---TYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITY 246
Query: 227 QNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
L+ C V A E K D+ T N+++NG C G + EA +F ++
Sbjct: 247 TILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 306
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
C+P+ +T+ + ++ G+ A RL M KG P VVT N +I+ LC K+ +
Sbjct: 307 YGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGR 366
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A++VL +M GC+PN +YN L+ C+ K+M+ EYL+ M + C P+ +T+N L
Sbjct: 367 AIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG--CYPDIVTYNTL 424
Query: 406 LKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
L +L K +V +L ++ GC TYN ++ + EEM +KG+
Sbjct: 425 LTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGL 484
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
PD +Y+ ++ GL +G++++A+ FH+M + P T
Sbjct: 485 KPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVT 525
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 148/301 (49%), Gaps = 9/301 (2%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNI 262
+EE + +R G++ D+ A +L+ CR + A E +N D+ T N+
Sbjct: 122 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNV 181
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ G+C G + +A + + PD VTY T + +L GKL A+ + ++
Sbjct: 182 LIGGYCKSGEIDKALEVLE---RMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE 238
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDV+T +I+A C + +A+++L EM+ +GC P+V TYN LI +CK R++
Sbjct: 239 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 298
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILK 439
++L+ M C PN IT N +L+S+ + +L M R GC S T+N+++
Sbjct: 299 KFLNNMPSYG--CKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILIN 356
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ E+M K G P+ SY ++HG + +++ A+ Y M +G P
Sbjct: 357 FLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 416
Query: 500 E 500
+
Sbjct: 417 D 417
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 163/332 (49%), Gaps = 10/332 (3%)
Query: 171 RFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+F+E + ++PD++ + L+ + + ++A + + + G + D+ + L+
Sbjct: 127 KFLERMIYQGDIPDVIACTS---LIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLI 183
Query: 231 LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
C+ ++ A E + D+ T N IL C G + EA ++ +C P
Sbjct: 184 GGYCKSGEIDKALEVLE--RMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYP 241
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D +TY + A +G A++L M +KG KPDVVT N +I+ +C + R+ EA++ L
Sbjct: 242 DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFL 301
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
M + GC PNV T+N +++ +C R L +M +K C P+ +TFN L+ L
Sbjct: 302 NNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG--CSPSVVTFNILINFLC 359
Query: 411 KPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+ + VLE+M ++GC ++ +YN +L + D+ E M +G PD
Sbjct: 360 RKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIV 419
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+Y ++ L G+++ A+ +++ KG P
Sbjct: 420 TYNTLLTALCKDGKVDAAVEILNQLSSKGCSP 451
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 171/372 (45%), Gaps = 52/372 (13%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P +N IL L + + E ++V D PD++ TY IL+ V +
Sbjct: 205 APDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVI---TYTILIEATCNDSGVGQ 261
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
A+ + D ++ G D+ + L+ +C+ ++ A F + + +G ++ T NIIL
Sbjct: 262 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS-YGCKPNVITHNIIL 320
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C G +A+R D+++ C P VT+ +N L +K LG A+ + + M + G
Sbjct: 321 RSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCV 380
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+ ++ N ++ C +K++ A+E L M +RGC P++ TYN+L+ LCK +++ E
Sbjct: 381 PNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEI 440
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLY 441
L+++ K C P IT+N ++ L K + + +LE M R G K TY+ +L+
Sbjct: 441 LNQLSSKG--CSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGL 498
Query: 442 VNWDCEDKVRHTWEEME-----------------------------------KKGMGPDQ 466
D+ + +ME +KG P +
Sbjct: 499 GREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTE 558
Query: 467 RSYTVMIHGLYD 478
+YT++I G+ D
Sbjct: 559 ATYTILIEGIAD 570
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 170/361 (47%), Gaps = 28/361 (7%)
Query: 65 ETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQ-----C--E 117
++ +L ++ D + + + YP D I + I TC+ S G+ K L++ C +
Sbjct: 220 DSGKLKEAMEVLDRQLQRECYP-DVITYTIL-IEATCNDSGVGQAMKLLDEMRKKGCKPD 277
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVF--NAILDVLGRARRFVEL 175
+ + LI + R D EA K+++ Y NV N IL + R+++
Sbjct: 278 VVTYNVLINGICKEGRLD-EA----IKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDA 332
Query: 176 IQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL 229
++ +M P +V T+ IL+N ++ AI V ++ + G + + ++ L
Sbjct: 333 ERLLSDMLRKGCSPSVV---TFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPL 389
Query: 230 LLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
L C+ K ++ A + E + Y DI T N +L C G V A + C
Sbjct: 390 LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGC 449
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
P +TY T ++ LTK GK A+ L + M KG KPD++T + ++ L + ++ EA++
Sbjct: 450 SPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIK 509
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ +M+ P+ TYN+++ LCK ++ ++L M +K C P E T+ L++
Sbjct: 510 IFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG--CKPTEATYTILIEG 567
Query: 409 L 409
+
Sbjct: 568 I 568
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 8/201 (3%)
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L + G+L L+ + M +G PDV+ C +I C + +A ++ ++N G +P+
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V TYN LI CK ++ E L+ M S P+ +T+N +L+SL K +E V
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERM-----SVAPDVVTYNTILRSLCDSGKLKEAMEV 230
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L+R + C TY ++++ N + +EM KKG PD +Y V+I+G+
Sbjct: 231 LDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 290
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
+GRL++A+ + + M G P
Sbjct: 291 EGRLDEAIKFLNNMPSYGCKP 311
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 14/261 (5%)
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
EF +I ++ NG + E +F + +I PD + + + + GK A
Sbjct: 106 EFASNIHLRKLVRNG-----ELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKA 160
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
R+ + + G PDV+T N +I C I +ALEVL M P+V TYN++++
Sbjct: 161 TRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRS 217
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCK 428
LC +++ E LD Q+ C P+ IT+ L+++ V +L+ M + GCK
Sbjct: 218 LCDSGKLKEAMEVLDRQLQRE--CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCK 275
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TYNV++ D+ M G P+ ++ +++ + GR DA
Sbjct: 276 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERL 335
Query: 489 FHEMRLKGMVPEPRT-GILVN 508
+M KG P T IL+N
Sbjct: 336 LSDMLRKGCSPSVVTFNILIN 356
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 202/420 (48%), Gaps = 16/420 (3%)
Query: 92 INVQNILKTCSVSTKGE-IEKALNQCELTLTDDLIVNVINRYRFDWE---AAYTFFKWVS 147
I V I S ST + ++++L + L++DLI V+ R RF A FF + +
Sbjct: 41 IQVDAIYNIISNSTSSQNLKQSLKSTGVFLSNDLIDKVLKRVRFSHGNPLQALDFFNFTA 100
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP----DLVNEKTYGILLNRYAAAHM 203
+ S + +L +LGR+R+F + V ++ +L+ +T ++L R A
Sbjct: 101 DRRGFYHSSYSLDTMLYILGRSRKFDHIWDVLIDIKRKDRNLITPRTLQVVLGRVAKVCS 160
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNII 263
V + F + K + D S F LL LC+ K + A + K F +++T NI+
Sbjct: 161 VRMTVESFWKFKRLVPVFDTSCFNALLRTLCQEKSMSDARNVYHHLKKGFRPNLQTFNIL 220
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L+GW + EA+ F++++ + +PD VTY + ++ K +L A + M E+
Sbjct: 221 LSGW---KSSEEAELFYEEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDI 277
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PDV+T II L + +A ++L+EMK GC P+V YN++I++ C KR++ Y
Sbjct: 278 LPDVITYTSIIGGLGLVGQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYS 337
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PW-VLERMERNGCKMSTDTYNVILKL 440
+ EME K S PN ++N + ++ W RM GC +T + ++KL
Sbjct: 338 LMAEMESKGMS--PNATSYNLFFRVFSWSNDLRNSWDFYGRMMDAGCLPNTQSCMFLIKL 395
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ + + W +M +KG G V++ L D G+L +A F +M KG P
Sbjct: 396 FKRHEKVEMALQLWNDMVEKGFGSYILVSDVLLGMLCDMGKLVEAEKCFLQMVEKGHKPS 455
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 113/240 (47%), Gaps = 13/240 (5%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D+ + + L ++ + A ++ + +KG +P++ T N ++ K EA
Sbjct: 179 DTSCFNALLRTLCQEKSMSDARNVYHHL-KKGFRPNLQTFNILLSGW---KSSEEAELFY 234
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
EMK G P++ TYNSLI CK + +E Y + M +++ LP+ IT+ ++ L
Sbjct: 235 EEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREED--ILPDVITYTSIIGGLG 292
Query: 411 ---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+P++ +L+ M+ +GC YN +++ Y D EME KGM P+
Sbjct: 293 LVGQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEMESKGMSPNAT 352
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKL 527
SY + L ++ ++ M G +P ++ + + IKL +R E+ + ++L
Sbjct: 353 SYNLFFRVFSWSNDLRNSWDFYGRMMDAGCLPNTQSCMFL----IKLFKRHEKVEMALQL 408
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 102/236 (43%), Gaps = 11/236 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF------DEMPDLVNEKT 190
E A F++ + G P +N+++DV + R + V D +PD++ T
Sbjct: 228 EEAELFYEEMKELG-VKPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILPDVI---T 283
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESE 249
Y ++ ++A + KE G D++A+ ++ C K ++ A + E E
Sbjct: 284 YTSIIGGLGLVGQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEME 343
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ + N+ + ++ + F+ ++ + C P++ + + + K+
Sbjct: 344 SKGMSPNATSYNLFFRVFSWSNDLRNSWDFYGRMMDAGCLPNTQSCMFLIKLFKRHEKVE 403
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
AL+L+ M EKG ++ + ++ LC ++ EA + +M +G P+ ++
Sbjct: 404 MALQLWNDMVEKGFGSYILVSDVLLGMLCDMGKLVEAEKCFLQMVEKGHKPSNVSF 459
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 202/427 (47%), Gaps = 27/427 (6%)
Query: 96 NILKTC---------SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWV 146
NIL C +VS G++ K Q ++ LI V N + + A + +
Sbjct: 132 NILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKI--KVAVELYNEM 189
Query: 147 SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAA 200
R G + P +N +++ L + + VF +M P++V TY +++
Sbjct: 190 VRSG-HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVV---TYNTIIDSLCK 245
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKT 259
+V +A+ G D + +++ LC + A F+ E+N D+ T
Sbjct: 246 DRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVT 305
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
NII++ V +A F +++ PD VTY T ++ L G+L A+RLF+ M
Sbjct: 306 YNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKME 365
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
+KG KPDVV N IID+LC + + +A+E L EM +RG PN TY++++ C + +++
Sbjct: 366 QKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLD 425
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNV 436
+ EM +N +PN +TF+ L+ L + E WV E M G + + TYN
Sbjct: 426 EATQLFKEMVGRN--VMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ Y ++ R +E M KG PD SY ++I+G + R++ A + +M +K
Sbjct: 484 LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543
Query: 497 MVPEPRT 503
+ P T
Sbjct: 544 LTPNTVT 550
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 156/303 (51%), Gaps = 10/303 (3%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKTMN 261
V++A+ F R + F L + + K + ++ + FG + + ++N
Sbjct: 74 VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTV-VYLCNQMDLFGVTHTVYSLN 132
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I++N C L +V A W + K +PD +T+ T +N + +GK+ A+ L+ M
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G +PDV++ N +I+ LC A+ V ++M+ GC PNV TYN++I LCK + +
Sbjct: 193 GHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252
Query: 382 YEYLDEMEQKNGSCLPNEITFNYL---LKSLKKPEEVPWVLERMERNGCKMSTDTYNVIL 438
++L EM + P+ IT+N + L L + E + +RME+NGCK TYN+I+
Sbjct: 253 MDFLSEMVGR--GIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIII 310
Query: 439 -KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
LY + D EM +G+ PD +YT ++HGL G+L +A+ F +M KG
Sbjct: 311 DSLYKDRLVNDAADF-LSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGC 369
Query: 498 VPE 500
P+
Sbjct: 370 KPD 372
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 192/376 (51%), Gaps = 18/376 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A FK + + G P +N I+D L + R + EM PD+V TY
Sbjct: 287 ATRLFKRMEQNG-CKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVV---TYT 342
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
+L+ + EAI +F + ++ G D+ A+ ++ LC+ + V A F SE +
Sbjct: 343 TILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFL-SEMVD 401
Query: 253 FGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
G + T + IL+G+C LG + EA + +K+++ P+++T++ V+ L ++G +
Sbjct: 402 RGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSE 461
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A +F+ M EKG +P++ T N +++ C + ++ EA +V M +GC P++ +YN LI
Sbjct: 462 ARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILIN 521
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGC 427
C +RM+ L +M K + PN +T+N ++K L + + + ++M +G
Sbjct: 522 GYCNSRRMDKAKALLTQMSVKKLT--PNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGM 579
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ TY+++L D+ ++ M++K + PD YT++I G++ G+LE A
Sbjct: 580 LPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKG 639
Query: 488 YFHEMRLKGMVPEPRT 503
F ++ G+ P RT
Sbjct: 640 LFSKLSADGIQPPGRT 655
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 188/407 (46%), Gaps = 57/407 (14%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
+ G ++ S+ ++ D L R + + P +V +G L A
Sbjct: 60 KNGGFASNSSNTISVDDALASFYRMARM----NPRPSIVE---FGKFLGSIAKMKQYSTV 112
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNG 266
+ + ++ FG + + L+ LCR HV+ A + + K D+ T ++NG
Sbjct: 113 VYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLING 172
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G + A + ++++S EPD ++Y T +N L G A+ +F+ M + G KP+
Sbjct: 173 VCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPN 232
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT N IID+LC + + +A++ L EM RG P+ TYNS++ LC + ++
Sbjct: 233 VVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFK 292
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKK--------------------PEEVPW--------- 417
MEQ NG C P+ +T+N ++ SL K P+ V +
Sbjct: 293 RMEQ-NG-CKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCY 350
Query: 418 ---------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT----WEEMEKKGMGP 464
+ ++ME+ GCK YN I ++ C+D++ + EM +G+ P
Sbjct: 351 LGQLNEAIRLFKKMEQKGCKPDVVAYNTI----IDSLCKDRLVNDAMEFLSEMVDRGIPP 406
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
+ +Y+ ++HG + G+L++A F EM + ++P T ILV+ +
Sbjct: 407 NAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGL 453
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 145/309 (46%), Gaps = 12/309 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A FK + ++G P +N I+D L + R + ++ EM D N TY +L
Sbjct: 357 AIRLFKKMEQKG-CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTIL 415
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+ + ++EA +F + + F L+ LC+ V A FE+ E G
Sbjct: 416 HGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFET-MTEKGV 474
Query: 256 --DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
+I T N ++NG+C+ + EA++ ++ ++ C PD +Y +N ++ A
Sbjct: 475 EPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKA 534
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
L M K P+ VT N I+ LC+ R+ +A E+ ++M + G LP + TY+ L+ LC
Sbjct: 535 LLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLC 594
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMS 430
K ++ + M++K P+ I + L++ + K E + ++ +G +
Sbjct: 595 KHGHLDEALKLFKSMKEKKLE--PDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPP 652
Query: 431 TDTYNVILK 439
TYNV++K
Sbjct: 653 GRTYNVMIK 661
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 6/251 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
EA F + V R + P + F+ ++D L + E VF+ M + N TY
Sbjct: 426 EATQLFKEMVGR--NVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNE 252
L+N Y + EA VF+ G DL ++ L+ C + ++ A+ + +
Sbjct: 484 LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ T N I+ G C +G + +A+ +K + S P +TY+ +N L K G L AL
Sbjct: 544 LTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEAL 603
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+LF++M EK +PD++ +I+ + ++ A + ++ G P TYN +IK L
Sbjct: 604 KLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGL 663
Query: 373 CKIKRMETVYE 383
K + YE
Sbjct: 664 LKEGLSDEAYE 674
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 12/243 (4%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV------LGRARRF 172
TLT ++V+ + + EA + F E P +NA+++ + AR+
Sbjct: 443 TLTFSILVDGLCQEGMVSEARWVF--ETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKV 500
Query: 173 VELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
E++ PDL +Y IL+N Y + +++A + + + + ++
Sbjct: 501 FEIMVGKGCAPDL---HSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKG 557
Query: 233 LCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LC + A+ F+ + + T +I+LNG C G++ EA + +K + + K EPD
Sbjct: 558 LCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPD 617
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+ Y + + GKL A LF + G +P T N +I L + EA E+ R
Sbjct: 618 IILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFR 677
Query: 352 EMK 354
+ K
Sbjct: 678 KWK 680
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 186/368 (50%), Gaps = 9/368 (2%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VN 187
R+ + FF W + ++ + ++D+ G+ R+F Q+ D M +
Sbjct: 1153 RHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIP 1212
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
+T+ IL+ RY A + EA+ F+R +++G D AF ++ L + + A++FF+
Sbjct: 1213 VETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFD 1272
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
S K+ F D+ +++GWC GN+ EA+R + ++ + P+ TY+ ++AL + G+
Sbjct: 1273 SLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQ 1332
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A +F M + G P+ +T N ++ R + L+V +MK GC P+ TYN
Sbjct: 1333 ITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNF 1392
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMER 424
LI+ C+ +E + L+ +++ C N +FN + + K +V + +M+
Sbjct: 1393 LIESHCRDDNLEEAVKILNSVKK---GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKD 1449
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
C+ +T TYN++++++ + D V +EM++ + P+ +Y V+I G +
Sbjct: 1450 LKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNN 1509
Query: 485 ALSYFHEM 492
A S+F EM
Sbjct: 1510 AYSFFKEM 1517
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 35/237 (14%)
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
++T I++ + G EA + + C+PD + ++ +++L+KK + A F
Sbjct: 1213 VETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFD 1272
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
++ ++ +PDVV ++ C I EA V EMK G PNV TY+ +I LC+
Sbjct: 1273 SLKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSG 1331
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNV 436
++ ++ EM + C PN ITF N
Sbjct: 1332 QITRAHDVFSEM--IDVGCDPNAITF--------------------------------NN 1357
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
+++++V +KV + +M++ G PD +Y +I LE+A+ + ++
Sbjct: 1358 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVK 1414
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 4/239 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P ++ ++D L R+ + VF EM D+ N T+ L+ + A E+ + V
Sbjct: 1315 PNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQV 1374
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
+++ K G D + L+ CR ++E A S K + + N I L
Sbjct: 1375 YNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCISKL 1434
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G+V A R + + KC P++VTY + K L+L + M E +P+ T
Sbjct: 1435 GDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTY 1494
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCL-PNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+I C A +EM CL P++ Y +++ L K +++ E +++M
Sbjct: 1495 RVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKM 1553
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLER 421
Y +I K+++ + ++ +D M+ +N +P E TF L++ K E R
Sbjct: 1181 YMEMIDLAGKVRQFDLAWQLIDLMKTRNVE-IPVE-TFTILVRRYVKAGLAAEAVHAFNR 1238
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
ME GCK ++V++ + + ++ ++ + PD YT ++HG G
Sbjct: 1239 MEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGN 1297
Query: 482 LEDALSYFHEMRLKGMVPEPRTGILVND 509
+ +A F EM++ G+ P T +V D
Sbjct: 1298 ISEAERVFGEMKMAGIXPNVYTYSIVID 1325
>gi|356557209|ref|XP_003546910.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80880, mitochondrial-like [Glycine max]
Length = 504
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 193/406 (47%), Gaps = 12/406 (2%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM 182
DLI + I R +W+ A FKW D V N ++ VL +F + +M
Sbjct: 93 DLICSAIWVLREEWKPALLAFKWSCHGND----EKVCNLMIWVLATHGKFSTAWCIIRDM 148
Query: 183 --PDLVNEKTYGILLNRYAAAHMVEEAIGVFD--RRKEFGELDDLSAFQNLLLWLCRYKH 238
L + I+++RYA+A+ +AI F+ + +F D +F LL LC+Y++
Sbjct: 149 HRSSLSTRQAMLIMIDRYASANNSAKAIQTFNFMDKSDFRLTPDQESFHALLTALCKYRN 208
Query: 239 VEVAETFFESEKNEFGYDIKTMNIILNGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
VE E F K F D + NIILNGWC + ++YEAKR W+++ K PD+ +Y+
Sbjct: 209 VEEDEEFMLVNKKLFHLDTEGFNIILNGWCNITKDIYEAKRVWREMSKYCITPDATSYSY 268
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
++ +K+G L +LRL+ M ++G P + N ++ L + + EAL + ++K +G
Sbjct: 269 MISCFSKEGNLFDSLRLYDQMKKRGWIPGIEIYNSLVYVLTHENCLKEALRTIDKLKEQG 328
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW 417
P T+NS+I LC+ ++ + M ++N S P T++ + + +
Sbjct: 329 LQPGSVTFNSMILSLCEAGKLAEARIIFNSMVEENVS--PTTETYHAFFEGTDYQGTLEF 386
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
L RM+ +G S D++ +IL ++ W EM+ + P Y +M+ GL
Sbjct: 387 -LTRMKDSGLGPSKDSFVIILAKFLKLKQPVNAPKFWTEMKTYDVLPSCVHYRIMVEGLV 445
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKK 523
A ++ EM G +P L + + ++G+Q K
Sbjct: 446 TCRWFIKARGFYEEMISNGCSADPMLNRLFQEEVLGSGDKGKQNVK 491
>gi|298204688|emb|CBI25186.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 204/426 (47%), Gaps = 9/426 (2%)
Query: 88 DEIAINVQNILKTC-SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWV 146
D + + +LK +S++ E+ L+ + +L+ I R DW AY F W
Sbjct: 76 DPLESGLPELLKRLEGLSSEAEVMAVLDGSGVEPNQELVYWAIWGLREDWRLAYWVFNWG 135
Query: 147 SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMV 204
+ G S + ++ +LG ++F + E+ + + I+++RY AA+
Sbjct: 136 EKWGCNSERTR--GLVIWILGNCKKFGVAWCLIRELHRSSVDTRRAMLIMIDRYTAANDP 193
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
+AI F ++F D AF LL LC++ +VE AE K F + + NIIL
Sbjct: 194 CKAIKTFHIMEKFRLSPDQEAFYTLLTALCKHGNVEDAEELMFQNKKLFPLETEGFNIIL 253
Query: 265 NGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
NGW V +++EAKR W+++ K P++ TY ++ +K G L +LRLF M ++G
Sbjct: 254 NGWSNVSLDIFEAKRIWREMSKCCIVPNATTYTLMISCFSKFGNLFDSLRLFDDMKKRGW 313
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P + N +I L + + EAL++L ++K G + +YN +I+ LCK K++E
Sbjct: 314 IPGLEVYNSLIYVLTHENCLTEALKILGKIKEMGLQLDSASYNCMIRPLCKAKKLEEART 373
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
L M +N P T++ L+ EE VL+ + G + DT+ +IL
Sbjct: 374 ILAAMIGENLG--PTTETYHAFLEGASY-EETFEVLKNLRTAGFGPNGDTFLLILDNLFK 430
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D + W EM++ + P Y V+I GL G L A + EMR KG + +P+
Sbjct: 431 LDQPENALKIWVEMKQFDVVPGSEHYKVLIEGLTKFGWLVKARELYAEMRSKGFLDDPKL 490
Query: 504 GILVND 509
L+ D
Sbjct: 491 KKLLKD 496
>gi|225443152|ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Vitis vinifera]
Length = 537
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 204/426 (47%), Gaps = 9/426 (2%)
Query: 88 DEIAINVQNILKTC-SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWV 146
D + + +LK +S++ E+ L+ + +L+ I R DW AY F W
Sbjct: 76 DPLESGLPELLKRLEGLSSEAEVMAVLDGSGVEPNQELVYWAIWGLREDWRLAYWVFNWG 135
Query: 147 SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMV 204
+ G S + ++ +LG ++F + E+ + + I+++RY AA+
Sbjct: 136 EKWGCNSERTR--GLVIWILGNCKKFGVAWCLIRELHRSSVDTRRAMLIMIDRYTAANDP 193
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
+AI F ++F D AF LL LC++ +VE AE K F + + NIIL
Sbjct: 194 CKAIKTFHIMEKFRLSPDQEAFYTLLTALCKHGNVEDAEELMFQNKKLFPLETEGFNIIL 253
Query: 265 NGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
NGW V +++EAKR W+++ K P++ TY ++ +K G L +LRLF M ++G
Sbjct: 254 NGWSNVSLDIFEAKRIWREMSKCCIVPNATTYTLMISCFSKFGNLFDSLRLFDDMKKRGW 313
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P + N +I L + + EAL++L ++K G + +YN +I+ LCK K++E
Sbjct: 314 IPGLEVYNSLIYVLTHENCLTEALKILGKIKEMGLQLDSASYNCMIRPLCKAKKLEEART 373
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
L M +N P T++ L+ EE VL+ + G + DT+ +IL
Sbjct: 374 ILAAMIGENLG--PTTETYHAFLEGASY-EETFEVLKNLRTAGFGPNGDTFLLILDNLFK 430
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D + W EM++ + P Y V+I GL G L A + EMR KG + +P+
Sbjct: 431 LDQPENALKIWVEMKQFDVVPGSEHYKVLIEGLTKFGWLVKARELYAEMRSKGFLDDPKL 490
Query: 504 GILVND 509
L+ D
Sbjct: 491 KKLLKD 496
>gi|357440039|ref|XP_003590297.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479345|gb|AES60548.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 661
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 199/406 (49%), Gaps = 21/406 (5%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
+ L+++LI ++ RY+ DW++A F+W ++ ++ ++D+LGR + ++ +
Sbjct: 82 IHLSENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMRE 141
Query: 178 VFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+ +EM L+ T ++ R+ A ++A+ +FD + G + + LL LC+
Sbjct: 142 ILEEMRQESLITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCK 201
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
K VE A + K+ + T NI+++GWC + V EA +++ C P ++Y
Sbjct: 202 EKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISY 261
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+T + ++ L M + P+VVT I+ AL ++ EAL+V+ M
Sbjct: 262 STIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNA 321
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKP 412
GC P+ +NSLI L + R++ ++ ++ S PN T+N ++ +
Sbjct: 322 VGCRPDTLFFNSLIYTLGRAGRIDDA-THVFKVAMPKASVAPNTSTYNSMISMFCYYAQE 380
Query: 413 EEVPWVLERMERNG-CKMSTDTYNVILKLYVNWDCEDKVRH--TW------EEMEKKGMG 463
E +L+ ME++G CK TY+ ++K C K+R TW + + K +G
Sbjct: 381 ERAFGILKEMEKSGLCKPDIQTYHPLIK-----SCF-KMREIDTWLNDILNDMVNKYHIG 434
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
D +YT++IHGLY R + A F EM + +VP +T L+ D
Sbjct: 435 LDLSTYTLLIHGLYRADRCKWAFDLFEEMADQDIVPRYKTCRLLLD 480
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 186/368 (50%), Gaps = 8/368 (2%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV---ELIQVFDEMPDLVN 187
R+ + + FF W + + +N ++D+ G+ R F LI + +
Sbjct: 118 RHGIPFLQSLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRIT 177
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
T+ +L+ RY A + EA+ F+R +++G D +F ++ LC+ + AE FF+
Sbjct: 178 VSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFD 237
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
S K++F D+ +++GWC G++ +A+ + D+ ++ +P+ TY+ +++L + G+
Sbjct: 238 SLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQ 297
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A +F M + G P+ VT N ++ R + L+V +MK GC + +YN
Sbjct: 298 ITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNF 357
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMER 424
LI+ CK + ++ + LD M +K + PN TFN + + + +V + +M+
Sbjct: 358 LIESHCKDENLDEAVKVLDTMVKKGVA--PNASTFNSIFGCIAELHDVNGAHRMYAKMKE 415
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
C +T TYN++++++ + D V +EM++ + P+ +Y ++I +KG +
Sbjct: 416 LKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNN 475
Query: 485 ALSYFHEM 492
A + EM
Sbjct: 476 AYNLMKEM 483
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 35/247 (14%)
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ T ++++ + G EA + + C+PD V+++ +++L KK + A F
Sbjct: 178 VSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFD 237
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
++ K +PDV+ ++ C I +A EV +MK G PNV TY+ +I LC+
Sbjct: 238 SLKHKF-EPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCG 296
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNV 436
++ ++ EM + C PN +TF N
Sbjct: 297 QITRAHDVFSEM--IDAGCDPNAVTF--------------------------------NS 322
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+++++V +KV + +M++ G D SY +I L++A+ M KG
Sbjct: 323 LMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKG 382
Query: 497 MVPEPRT 503
+ P T
Sbjct: 383 VAPNAST 389
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 414 EVPW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
++ W +++ M+ G +++ T++V+++ YV + H + ME G PD+ S++++
Sbjct: 160 DLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIV 219
Query: 473 IHGLYDKGRLEDALSYFHEMRLK 495
I L K R +A +F ++ K
Sbjct: 220 ISSLCKKRRASEAELFFDSLKHK 242
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 133/248 (53%), Gaps = 5/248 (2%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T + +LNG + +A + + +++K EPD +TY+T +N L K G A++L + M
Sbjct: 49 TFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM 108
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
EKG KP+VV + IID+LC K I EA+E L EM NRG PNV TY+S++ C + R
Sbjct: 109 EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRS 168
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYN 435
+M ++N +P+ +TFN L+ L K E V E M G + + +TYN
Sbjct: 169 NEATSLFKQMVERN--VMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYN 226
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++ Y + D+ + + M +KG P RSY ++I G GR+++A EM K
Sbjct: 227 ALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHK 286
Query: 496 GMVPEPRT 503
+ P+ T
Sbjct: 287 ALTPDTVT 294
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 188/384 (48%), Gaps = 20/384 (5%)
Query: 130 NRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------P 183
+ + F + FK P F+ +L+ L + ++ +++FDEM P
Sbjct: 26 DHFHFAFSVLGNMFKL-----GLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEP 80
Query: 184 DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE 243
D++ TY ++N AI + + +E G ++ + ++ LC+ K + A
Sbjct: 81 DVI---TYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAM 137
Query: 244 TFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
F N ++ T + IL+G+C LG EA +K +++ PD+VT+ V+ L
Sbjct: 138 EFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGL 197
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
+K+G + A +F+ M EKG +P+V T N ++D C + ++ EA ++ M +GC P+V
Sbjct: 198 SKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSV 257
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVL 419
+YN LIK CK R++ L EM K + P+ +T++ L+K +P++ +L
Sbjct: 258 RSYNILIKGHCKSGRIDEAKGLLAEMSHK--ALTPDTVTYSTLMKGFCQDGRPQDAQKLL 315
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
E M G TY+++L D+ + M++ + P+ YT++I G+ +
Sbjct: 316 EEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNF 375
Query: 480 GRLEDALSYFHEMRLKGMVPEPRT 503
G+LE A F + +KG+ P+ T
Sbjct: 376 GKLEAARELFSNLFVKGIQPDVVT 399
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
T+T +++V+ +++ EA F + E P N +NA++D + E ++
Sbjct: 187 TVTFNILVDGLSKEGMILEAQCVFETMI--EKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244
Query: 179 FDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
F+ M P + ++Y IL+ + + ++EA G+ D + L+
Sbjct: 245 FNIMVRKGCAPSV---RSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKG 301
Query: 233 LCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
C+ + A+ E E +G D+ T +I+L+G C G++ EA K + +SK EP
Sbjct: 302 FCQDGRPQDAQKLLE-EMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEP 360
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+ Y + + GKL A LF ++ KG +PDVVT +I L EA E+
Sbjct: 361 NIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELF 420
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
R+M GCLPN TYN +I+ + ++EM + S + TF +L L+
Sbjct: 421 RDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFS--ADSSTFQ-MLSDLE 477
Query: 411 KPEEVPWVLERMERNGCKM 429
+E+ + G KM
Sbjct: 478 SRDEIISLFMHGSSQGRKM 496
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 181/375 (48%), Gaps = 19/375 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNV-FNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
EA TF + + ++ P S V FN +L + + + L+ + +M PD+
Sbjct: 53 EALSTFNRMLHKQ---PPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY--- 106
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
T I++N + V+ A + + G D + F L+ LC + A F+
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166
Query: 250 KNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
E F ++ T ++NG C +GN A R + + + C+P+ V ++T +++L K ++
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A +F M KG P++VT N +I LC ++ EM + +P+V T N++
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS--LKKPEEVPW-VLERMERN 425
+ LCK + ++ +D M + PN +T+N L+ L+ +V V + M
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVE--PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
C + +YN ++ Y DK + +EEM ++ + P+ +Y +IHGL GRL+DA
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404
Query: 486 LSYFHEMRLKGMVPE 500
+S FHEM +G +P+
Sbjct: 405 ISLFHEMVARGQIPD 419
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 167/381 (43%), Gaps = 20/381 (5%)
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------ 182
+NR F + A K + P + F ++ L + E + +FD+M
Sbjct: 118 LNRVDFAFSALAKILKL-----GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EV 241
P++V TYG L+N AI + ++ ++ F L+ LC+ + V E
Sbjct: 173 PNVV---TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
F E +I T N +++G C L +++ SK PD T T V+A
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K+G + A + M +G +P+VVT N ++D C + + A++V M ++ C+ N
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVAN 349
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V +YN+LI CKI+ ++ +EM ++ + PN +T+N L+ L + ++ +
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELT--PNTVTYNTLIHGLCHVGRLQDAISL 407
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
M G TY + DK + +E PD + YT ++ G+
Sbjct: 408 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 467
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
G LEDA F + KG+ P
Sbjct: 468 AGELEDARDLFSNLSSKGLQP 488
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 169/374 (45%), Gaps = 44/374 (11%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV--NEKTYGI------- 193
+G+ P VF+ ++D L + R+ E +F EM P++V N +G+
Sbjct: 203 QGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 262
Query: 194 ----LLNRYAAAH-------------------MVEEAIGVFDRRKEFGELDDLSAFQNLL 230
L+N + MV EA V D G ++ + L+
Sbjct: 263 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 322
Query: 231 LWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
C V+VA F++ + ++ + N ++NG+C + +V +A ++++ + +
Sbjct: 323 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 382
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P++VTY T ++ L G+L A+ LF M +G+ PD+VT + D LC + + +A+ +
Sbjct: 383 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 442
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
L+ ++ P++ Y +++ +C+ +E + + K PN T+N ++ L
Sbjct: 443 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ--PNVWTYNIMIHGL 500
Query: 410 KKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K E + M +NGC + TYN+I + ++ + + EEM +G D
Sbjct: 501 CKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV 560
Query: 467 RSYTVMIHGLYDKG 480
+ T+++ L D G
Sbjct: 561 STTTLLVGMLSDDG 574
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 107/247 (43%), Gaps = 19/247 (7%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRF--------DWEAAYTFFKWVSREGDYSPGSN 157
+ E++ A+ + + D + NVI+ + A F+ +SR+ + +P +
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ-ELTPNTV 386
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
+N ++ L R + I +F EM PDLV TY L + +++A+ +
Sbjct: 387 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV---TYRTLSDYLCKNRHLDKAMALL 443
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVL 270
+ D+ + +L +CR +E A F + ++ ++ T NI+++G C
Sbjct: 444 KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQ 503
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G + EA + + ++ K+ C P+ TY + + + L + M +G DV T
Sbjct: 504 GLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTT 563
Query: 331 NCIIDAL 337
++ L
Sbjct: 564 TLLVGML 570
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 5/211 (2%)
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
S ++ TF + L AL F M K P V N ++ ++ K L + R
Sbjct: 35 SSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSR 94
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-- 409
+M + G P+V T +I LC + R++ + L ++ + P+ TF L++ L
Sbjct: 95 QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQ--PDATTFTTLIRGLCV 152
Query: 410 -KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
K E + ++M G + + TY ++ ME+ P+
Sbjct: 153 EGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVV 212
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++ +I L ++ +A + F EM KG+ P
Sbjct: 213 FSTLIDSLCKDRQVTEAFNIFSEMITKGISP 243
>gi|297843042|ref|XP_002889402.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
gi|297335244|gb|EFH65661.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
Length = 490
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 213/446 (47%), Gaps = 22/446 (4%)
Query: 66 TAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVST-KGEIEKALNQCELTLTDDL 124
+ +HS+A S K P +E ++ + + + + S +GE++++L+ + L+ DL
Sbjct: 18 SVSFLHSVALSCAK-----VPVEEEDVDAETVFRMINGSNLQGELKESLSSSGIHLSKDL 72
Query: 125 IVNVINRYRFDWE---AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE 181
I V+ R RF F+++ + S + +L +LGR R+F ++ ++ E
Sbjct: 73 IDRVLKRVRFSHGNPIQTLEFYRYAGARRGFYHSSFSLDTMLYILGRNRKFDQIWEILIE 132
Query: 182 MP----DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF-GELDDLSAFQNLLLWLCRY 236
L++ +T ++L R A V + + F + K + D + F LL LC+
Sbjct: 133 TKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQE 192
Query: 237 KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
K + A + S K++F D++T NI+L+GW K +PD VTY
Sbjct: 193 KSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMKG---KGLKPDVVTYN 249
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+ ++ K ++ A +L M E+ PDV+T II L + +A EVL+EMK
Sbjct: 250 SLIDVYCKDREIEKAYKLIDKMREEDETPDVITYTTIIGGLGLIGQPDKAREVLKEMKEY 309
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV- 415
GC P+V YN+ I++ C +R+ + +DEM +K S PN T+N + L ++
Sbjct: 310 GCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVKKGLS--PNATTYNLFFRVLSLANDLG 367
Query: 416 -PWVL-ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
W L ERM NGC +T + ++K++ + D WE+M KG G V++
Sbjct: 368 RSWELYERMLGNGCLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLL 427
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVP 499
L D ++E+A EM KG P
Sbjct: 428 DLLCDLAKVEEAEKCLLEMVEKGHRP 453
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 20/277 (7%)
Query: 258 KTMNIILNGWCVLGNVYEA-KRFWKDIIKSKCEPDSVTYATF---VNALTKKGKLGTALR 313
+TM ++L L +V + + FWK + PD A F + L ++ + A
Sbjct: 144 RTMQVVLGRVAKLCSVRQTVESFWK---FKRLVPDFFDTACFNALLRTLCQEKSMTDARN 200
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
++ ++ + +PD+ T N ++ K EA EMK +G P+V TYNSLI C
Sbjct: 201 VYHSLKHQF-QPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYC 256
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMS 430
K + +E Y+ +D+M +++ + P+ IT+ ++ L +P++ VL+ M+ GC
Sbjct: 257 KDREIEKAYKLIDKMREEDET--PDVITYTTIIGGLGLIGQPDKAREVLKEMKEYGCYPD 314
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
YN ++ Y +EM KKG+ P+ +Y + L L + +
Sbjct: 315 VAAYNAAIRNYCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYE 374
Query: 491 EMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKL 527
M G +P ++ + + IK+ +R E+ ++L
Sbjct: 375 RMLGNGCLPNTQSCMFL----IKMFKRHEKVDMAMRL 407
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 100/222 (45%), Gaps = 10/222 (4%)
Query: 154 PGSNVFNAILDV------LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P +N+++DV + +A + ++ ++ DE PD++ TY ++ ++A
Sbjct: 243 PDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDETPDVI---TYTTIIGGLGLIGQPDKA 299
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNG 266
V KE+G D++A+ + C + + A+ E K + T N+
Sbjct: 300 REVLKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 359
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ ++ + ++ ++ + C P++ + + + K+ A+RL++ M KG
Sbjct: 360 LSLANDLGRSWELYERMLGNGCLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSY 419
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
+ + ++D LC ++ EA + L EM +G P+ ++ +
Sbjct: 420 SLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 461
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 181/375 (48%), Gaps = 19/375 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNV-FNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
EA TF + + ++ P S V FN +L + + + L+ + +M PD+
Sbjct: 53 EALSTFNRMLHKQ---PPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY--- 106
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
T I++N + V+ A + + G D + F L+ LC + A F+
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166
Query: 250 KNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
E F ++ T ++NG C +GN A R + + + C+P+ V ++T +++L K ++
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A +F M KG P++VT N +I LC ++ EM + +P+V T N++
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS--LKKPEEVPW-VLERMERN 425
+ LCK + ++ +D M + PN +T+N L+ L+ +V V + M
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVE--PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
C + +YN ++ Y DK + +EEM ++ + P+ +Y +IHGL GRL+DA
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404
Query: 486 LSYFHEMRLKGMVPE 500
+S FHEM +G +P+
Sbjct: 405 ISLFHEMVARGQIPD 419
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 167/381 (43%), Gaps = 20/381 (5%)
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------ 182
+NR F + A K + P + F ++ L + E + +FD+M
Sbjct: 118 LNRVDFAFSALAKILKL-----GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EV 241
P++V TYG L+N AI + ++ ++ F L+ LC+ + V E
Sbjct: 173 PNVV---TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
F E +I T N +++G C L +++ SK PD T T V+A
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K+G + A + M +G +P+VVT N ++D C + + A++V M ++ C+ N
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVAN 349
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V +YN+LI CKI+ ++ +EM ++ + PN +T+N L+ L + ++ +
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELT--PNTVTYNTLIHGLCHVGRLQDAISL 407
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
M G TY + DK + +E PD + YT ++ G+
Sbjct: 408 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 467
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
G LEDA F + KG+ P
Sbjct: 468 AGELEDARDLFSNLSSKGLQP 488
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 169/374 (45%), Gaps = 44/374 (11%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV--NEKTYGI------- 193
+G+ P VF+ ++D L + R+ E +F EM P++V N +G+
Sbjct: 203 QGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 262
Query: 194 ----LLNRYAAAH-------------------MVEEAIGVFDRRKEFGELDDLSAFQNLL 230
L+N + MV EA V D G ++ + L+
Sbjct: 263 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 322
Query: 231 LWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
C V+VA F++ + ++ + N ++NG+C + +V +A ++++ + +
Sbjct: 323 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 382
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P++VTY T ++ L G+L A+ LF M +G+ PD+VT + D LC + + +A+ +
Sbjct: 383 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 442
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
L+ ++ P++ Y +++ +C+ +E + + K PN T+N ++ L
Sbjct: 443 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ--PNVWTYNIMIHGL 500
Query: 410 KKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K E + M +NGC + TYN+I + ++ + + EEM +G D
Sbjct: 501 CKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV 560
Query: 467 RSYTVMIHGLYDKG 480
+ T+++ L D G
Sbjct: 561 STTTLLVGMLSDDG 574
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 107/247 (43%), Gaps = 19/247 (7%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRF--------DWEAAYTFFKWVSREGDYSPGSN 157
+ E++ A+ + + D + NVI+ + A F+ +SR+ + +P +
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ-ELTPNTV 386
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
+N ++ L R + I +F EM PDLV TY L + +++A+ +
Sbjct: 387 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV---TYRTLSDYLCKNRHLDKAMALL 443
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVL 270
+ D+ + +L +CR +E A F + ++ ++ T NI+++G C
Sbjct: 444 KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQ 503
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G + EA + + ++ K+ C P+ TY + + + L + M +G DV T
Sbjct: 504 GLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTT 563
Query: 331 NCIIDAL 337
++ L
Sbjct: 564 TLLVGML 570
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 5/211 (2%)
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
S ++ TF + L AL F M K P V N ++ ++ K L + R
Sbjct: 35 SSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSR 94
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-- 409
+M + G P+V T +I LC + R++ + L ++ + P+ TF L++ L
Sbjct: 95 QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQ--PDATTFTTLIRGLCV 152
Query: 410 -KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
K E + ++M G + + TY ++ ME+ P+
Sbjct: 153 EGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVV 212
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++ +I L ++ +A + F EM KG+ P
Sbjct: 213 FSTLIDSLCKDRQVTEAFNIFSEMITKGISP 243
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 178/388 (45%), Gaps = 48/388 (12%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIG 209
+ V+N +L+VL R L V++EM PD+V T L+ AH V A+
Sbjct: 160 TAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVV---TLNTLIKALCRAHQVRTAVL 216
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK--TMNIILNGW 267
+ + D + F L+ +E A +++ E G T+N+++NG+
Sbjct: 217 MLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAA-LRVKTKMMETGCSPTRVTVNVLINGY 275
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C +G V +A + + I EPD VTY TFV+ L + G + AL++ M ++G PDV
Sbjct: 276 CKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDV 335
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T N +I+ L + EA ++ +M +RGCLP+ TT+N+LI LC R+E + E
Sbjct: 336 FTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARE 395
Query: 388 M---------------------------------EQKNGSCLPNEITFNYLLK---SLKK 411
+ E K+ C P+E+T+N L+ S+ K
Sbjct: 396 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGK 455
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
+L+ ME NGC ST TYN I+ ++ +++M+ G+ ++
Sbjct: 456 LVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNT 515
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+I GL R++DA +M +G+ P
Sbjct: 516 LIDGLCKAKRIDDATELIEQMVKEGLQP 543
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 171/365 (46%), Gaps = 21/365 (5%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P +N + L + ++V D M PD+ TY ++N + ++
Sbjct: 296 FEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVF---TYNTVINCLSKNGELD 352
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
EA G+ ++ + G L D + F L++ LC +E A + E D+ T NI++
Sbjct: 353 EAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILI 412
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N C +G+ + R ++++ S C PD VTY ++ L GKL AL L + M G
Sbjct: 413 NALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCP 472
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
VT N IIDALC + RI EA EV +M G + T+N+LI LCK KR++ E
Sbjct: 473 RSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATEL 532
Query: 385 LDEMEQKNGSCLPNEITFNYLLK------SLKKPEEVPWVLERMERNGCKMSTDTYNVIL 438
+++M ++ P+ IT+N +L LKK ++ LE M NG ++ TY ++
Sbjct: 533 IEQMVKE--GLQPSNITYNSILTHYCKQGDLKKAADI---LETMTANGFEIDVVTYGTLI 587
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
M KG+ P ++Y +I L+ + L DALS F EM G
Sbjct: 588 NGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEP 647
Query: 499 PEPRT 503
P+ T
Sbjct: 648 PDALT 652
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 157/354 (44%), Gaps = 43/354 (12%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
T +L+N Y VE+A+G + G D + + LC+ HV A +
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLM 326
Query: 250 KNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV-------- 299
E G+D + T N ++N G + EAK ++ C PD+ T+ T +
Sbjct: 327 LQE-GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNR 385
Query: 300 ---------------------------NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
NAL K G +RLF+ M G PD VT N
Sbjct: 386 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNI 445
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+ID LC ++ AL++L+EM++ GC + TYN++I LCK R+E E D+M+
Sbjct: 446 LIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHG 505
Query: 393 GSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
S + +TFN L+ L K+ ++ ++E+M + G + S TYN IL Y K
Sbjct: 506 IS--RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKK 563
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
E M G D +Y +I+GL GR + AL MR+KG+ P P+
Sbjct: 564 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKA 617
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 41/261 (15%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
+ D+ Y +N L + ++ ++ M ++G +PDVVT N +I ALC ++ A+
Sbjct: 157 QADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVL 216
Query: 349 VLREMKNR-----------------------------------GCLPNVTTYNSLIKHLC 373
+L EM + GC P T N LI C
Sbjct: 217 MLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYC 276
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME---RNGCKMS 430
K+ R+E Y+ + E +G P+++T+N + L + V L+ M+ + G
Sbjct: 277 KMGRVEDALGYIQK-EIADGF-EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPD 334
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TYN ++ D+ + +M +G PD ++ +I L + RLE+AL
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAR 394
Query: 491 EMRLKGMVPEPRT-GILVNDM 510
E+ +KG+ P+ T IL+N +
Sbjct: 395 ELTVKGLSPDVYTFNILINAL 415
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 7/183 (3%)
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G + D N +++ L R+ V EM +RG P+V T N+LIK LC+ ++ T
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTA 214
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVIL 438
L+EM + P+E TF L++ + + L +M GC + T NV++
Sbjct: 215 VLMLEEMSSH--AVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLI 272
Query: 439 KLYVNWD-CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
Y ED + + +E+ G PDQ +Y +H L G + AL M +G
Sbjct: 273 NGYCKMGRVEDALGYIQKEI-ADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGH 331
Query: 498 VPE 500
P+
Sbjct: 332 DPD 334
>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 200/415 (48%), Gaps = 10/415 (2%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
+ L+ DL+ ++ RY+ DW++A F+W S + S ++ ++D+LGR + +L
Sbjct: 71 IPLSRDLVHRLLWRYKDDWKSALGVFRWASSRPSFRHSSESYDMMVDILGRMKVMEKLRD 130
Query: 178 VFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+ +EM + LVN T + R+ A +A+ +FD + G + + LL LC+
Sbjct: 131 LLEEMREGGLVNMNTVAKAMRRFVGAGQWVDAVRIFDDLQALGLEKNTESMNLLLDTLCK 190
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
K V+ A F K + T NI ++GWC + V EA +++ P ++Y
Sbjct: 191 EKFVQQAREIFLELKQHIAPNAHTFNIFIHGWCKICRVDEAHWTIQEMKGYGFHPCVISY 250
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+T + ++G L M +G +V+T I+ AL K+ EAL+V M++
Sbjct: 251 STLIQCYCQEGNFSRVYELLDEMQAQGCSANVITYTSIMCALGKAKKFEEALKVPERMRS 310
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKP 412
GC P+ +NSLI L + R++ + ++E PN T+N ++ +
Sbjct: 311 SGCRPDTLFFNSLIHTLGRAGRLDDAADVF-KVEMPKAGVSPNTSTYNSMISMFCYHAQE 369
Query: 413 EEVPWVLERMERN-GCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEM-EKKGMGPDQRSY 469
+ +L+ ME + GCK TY+ ++K + + + + +M K+ + D +Y
Sbjct: 370 KRALEILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINKQHLSLDLSTY 429
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKV 524
T++IHGL + R A S F EM + ++P RT L+ D +K K + +K+
Sbjct: 430 TLLIHGLCREDRCNWAFSLFEEMIDQDIIPRYRTCRLLLD-EVKQKNMYQAAEKI 483
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 195/388 (50%), Gaps = 36/388 (9%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE---LIQVFDE---MPDLVNEK 189
WE A F + G P + ++D+L + + +E L++V + +PD+V
Sbjct: 353 WEKAKCLFNEMLDVG-IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCT 411
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-- 247
T L+ H + +A +F + ++ G + ++ L+ LC+ ++++A +
Sbjct: 412 T---LVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 468
Query: 248 -SEKNEFGYDIK----TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
S+ + +G + K + +II++G C G EA+ +K++ PD ++Y + ++
Sbjct: 469 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 528
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
+ GK A LF M + G +PDV T + +ID LC + ++ EA E+L M RGC+PN
Sbjct: 529 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 588
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERM 422
TY +L+K LC R+ + +M QK G CLP+ +T+ L+K L + + LE
Sbjct: 589 VTYTTLVKGLCMNDRISEATQLFMKM-QKLG-CLPDVVTYGTLMKGLCQTGNIKTALELH 646
Query: 423 ERNGCKMSTDT-------------YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+ KM +DT Y++I+ ED+ R ++EM+ G+ P+ SY
Sbjct: 647 K----KMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISY 702
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGM 497
T +IHG G+LEDA F+EM +G+
Sbjct: 703 TSLIHGFCRSGKLEDAKHLFNEMVDQGV 730
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 194/398 (48%), Gaps = 24/398 (6%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE---LIQVFDEMPDLVNEKTYG 192
WE A F + G S + ++D+L + + +E L++V + +++ TY
Sbjct: 172 WEKAKCLFNEMLDVGIRSD-VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYS 230
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
L+ H + EA +F ++ G D A+ L+ LC+ ++ A + N+
Sbjct: 231 TLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLND 290
Query: 253 FG-YDIK------TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
G Y IK + +II++G C EA+ +K++ PD ++Y T ++
Sbjct: 291 TGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLS 350
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK A LF M + G +PDV T + +ID LC K ++ EA ++L + RGC+P+V T
Sbjct: 351 GKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTC 410
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERN 425
+L+K LC R+ + +M QK G C+PN +T L+K L + + LE + +N
Sbjct: 411 TTLVKGLCMKHRISKATQLFLKM-QKLG-CMPNVVTCATLMKGLCQSGNIKIALE-LHKN 467
Query: 426 ----------GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
CK + +Y++I+ ED+ R ++EM+ G+ PD SYT +IHG
Sbjct: 468 MLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 527
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
G+ +DA F+EM G+ P+ T ++ DM K
Sbjct: 528 FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 565
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 182/379 (48%), Gaps = 21/379 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVE---LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P ++D+ + + +E L++V + +++ TY L+ H + EA +
Sbjct: 8 PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQL 67
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG-YDIK------TMNII 263
F K+ G D A+ L+ LC+ + +A + N+ Y IK + +II
Sbjct: 68 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSII 127
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++G C EA+ +K++ PD ++Y + ++ + GK A LF M + G
Sbjct: 128 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGI 187
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+ DV T + +ID LC + ++ EA E+L M RGC+ ++ TY++LIK LC R+
Sbjct: 188 RSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATR 247
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL----ERMERNG-----CKMSTDTY 434
M QK G C P+ I + L+K L + + L E + G CK + +Y
Sbjct: 248 LFMSM-QKLG-CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISY 305
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++I+ ED+ R ++EM+ +G+ PD SYT +IHG G+ E A F+EM
Sbjct: 306 SIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 365
Query: 495 KGMVPEPRTGILVNDMNIK 513
G+ P+ T ++ DM K
Sbjct: 366 VGIQPDVTTSSVLIDMLCK 384
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 36/229 (15%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
+PD T ++ K+GK+ A L + M ++G D+VT + +I LC K RI EA +
Sbjct: 7 QPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQ 66
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY----EYLDEMEQKNGSCLPNEITFNY 404
+ MK GC P+ Y +L+K LC+ ++ E L++ Q C P ++++
Sbjct: 67 LFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSI 126
Query: 405 LLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
++ L K ED+ R ++EM+ +GM P
Sbjct: 127 IIDGLCKDRR--------------------------------EDEARELFKEMKAQGMMP 154
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
D SYT +IHG G+ E A F+EM G+ + T ++ D+ K
Sbjct: 155 DVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCK 203
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 207/420 (49%), Gaps = 23/420 (5%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
E++ +L + +L+ ++ + R +A + FF+WV +G ++ + ++++LG
Sbjct: 81 ELQSSLAELAPSLSKTTVLQTLQLIRTPAKALH-FFRWVEAKG-FTHNEQSYFLMIEILG 138
Query: 168 R------ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
R AR FV I+ + ++ + L+ Y A + +E+I VF KE G
Sbjct: 139 RSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSP 198
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRF 279
+ F +LL + + +A+ F+ + +G D T NI++ G+C+ V E F
Sbjct: 199 SVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWF 258
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR--KPDVVTCNCIIDAL 337
+K++ + KC+PD VTY T V+ L + GK+ A + + M +K P+VVT +I
Sbjct: 259 FKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGY 318
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C K+ + EAL +L EM +RG PN TYN+LI+ LC+ ++++ + E L+ M +G +P
Sbjct: 319 CMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGM-VGDGGFIP 377
Query: 398 NEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+ T N L+K+ + K EE V E+M + + TY+V+++ + +
Sbjct: 378 DTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFF 437
Query: 455 EEMEKK-------GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
+E+ +K G P +Y M L G+ + A F ++ +G P L+
Sbjct: 438 DELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLI 497
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 138/368 (37%), Gaps = 55/368 (14%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
KG ++K+ N +T ++ + EA + VSR P +N ++
Sbjct: 295 KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSR--GLKPNKITYNTLIQG 352
Query: 166 LGRARRFVELIQVFDEM-------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
L A++ ++ ++ + M PD T L+ + +EEA VF++ E
Sbjct: 353 LCEAQKLDKIKEILEGMVGDGGFIPDTC---TLNTLIKAHCTMGKLEEAFSVFEKMSELR 409
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDI------KTMNIILNGWCVL 270
D + + L+ LC+ AE FF+ +EK +D+ N + C
Sbjct: 410 VQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSN 469
Query: 271 GNVYEAKRFWKDIIKSKCE----------------------------------PDSVTYA 296
G +A+R ++ ++K + PD+ TY
Sbjct: 470 GKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYG 529
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
++ L KKG A + + M + P + I+ AL K E+ +++ M R
Sbjct: 530 LMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLER 589
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP 416
N+ ++ L K + + + + + NG + E ++L +S K E
Sbjct: 590 RIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYE-NGYLVKMEELVSFLCQSRKLLEAQK 648
Query: 417 WVLERMER 424
+L +E+
Sbjct: 649 MLLFSLEK 656
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 185/358 (51%), Gaps = 17/358 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + FN +++ L + E + +F+EM P+++ +Y ++N A
Sbjct: 164 PDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVI---SYNTVINGLCKNGNTIMA 220
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+ VF + ++ ++ + ++ LC+ + V A F SE + G D+ T N IL+
Sbjct: 221 VRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFL-SEMVDRGIPPDVVTYNTILH 279
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C LG + EA R +K+++ PD+VT+ V+ L K+G + A + + M EKG +P
Sbjct: 280 GFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEP 339
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ T N ++D C ++ EA++VL M +GC PN+++YN LI CK KRM L
Sbjct: 340 NAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLL 399
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
EM +KN + P+ +T++ L++ L +P E + + M +G Y+++L +
Sbjct: 400 SEMSEKNLT--PDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFC 457
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D+ +EM ++ + P+ YT++I G++ G+LE A F ++ G+ P+
Sbjct: 458 KHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPD 515
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 169/355 (47%), Gaps = 15/355 (4%)
Query: 155 GSNVFN--AILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
GSN N +I D L R V + + P +V +G L A A+ + +
Sbjct: 68 GSNTSNDISIDDALTSFYRMVRM----NPRPSVVE---FGKFLGSIAKKKQYSSAVSLCN 120
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLG 271
+ FG ++ + L+ LCR HV+ A + K D T N ++NG C G
Sbjct: 121 QMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEG 180
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ EA + +++ S EP+ ++Y T +N L K G A+R+F+ M + KP+VVT N
Sbjct: 181 KIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYN 240
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
IID+LC + + EA+E L EM +RG P+V TYN+++ C + ++ EM +
Sbjct: 241 TIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGR 300
Query: 392 NGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
N +P+ +TFN L+ L K E V E M G + + TYN ++ Y + D
Sbjct: 301 N--VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMD 358
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ M KG P+ SY ++I+G R+ +A EM K + P+ T
Sbjct: 359 EAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVT 413
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 159/354 (44%), Gaps = 25/354 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N I+D L + R E ++ EM PD+V TY +L+ + + + EA
Sbjct: 234 PNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVV---TYNTILHGFCSLGQLNEA 290
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE----VAETFFE--SEKNEFGYDIKTMN 261
+F + D F L+ LC+ V V+ET E +E N + Y N
Sbjct: 291 TRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTY-----N 345
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++G+C+ + EA + +I C P+ +Y +N K ++ A RL M EK
Sbjct: 346 ALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEK 405
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
PD VT + ++ LC R EAL + +EM + G LP++ Y+ L+ CK ++
Sbjct: 406 NLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEA 465
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
+ L EM ++ PN I + L++ + K E + ++ +G + TYNV++
Sbjct: 466 LKLLKEMHERR--IKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMI 523
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
K + D+ + +ME G PD SY V+I G A+ EM
Sbjct: 524 KGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEM 577
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 12/260 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +NA++D + E I+V M P+L +Y IL+N Y + + EA
Sbjct: 339 PNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL---SSYNILINGYCKSKRMNEA 395
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNG 266
+ E D + L+ LC+ + E F E + D+ +I+L+G
Sbjct: 396 KRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDG 455
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C G++ EA + K++ + + +P+ + Y + + GKL A LF + G +PD
Sbjct: 456 FCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPD 515
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+ T N +I L + EA E R+M++ G LP+ +YN +I+ + + T + +D
Sbjct: 516 IWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLID 575
Query: 387 EMEQKNGSCLPNEITFNYLL 406
EM K S + TF LL
Sbjct: 576 EMVGKRFS--ADSSTFQMLL 593
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 207/420 (49%), Gaps = 23/420 (5%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
E++ +L + +L+ ++ + R +A + FF+WV +G ++ + ++++LG
Sbjct: 81 ELQSSLAELAPSLSKTTVLQTLQLIRTPAKALH-FFRWVEAKG-FTHNEQSYFLMIEILG 138
Query: 168 R------ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
R AR FV I+ + ++ + L+ Y A + +E+I VF KE G
Sbjct: 139 RSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSP 198
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRF 279
+ F +LL + + +A+ F+ + +G D T NI++ G+C+ V E F
Sbjct: 199 SVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWF 258
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR--KPDVVTCNCIIDAL 337
+K++ + KC+PD VTY T V+ L + GK+ A + + M +K P+VVT +I
Sbjct: 259 FKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGY 318
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C K+ + EAL +L EM +RG PN TYN+LI+ LC+ ++++ + E L+ M +G +P
Sbjct: 319 CMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGM-VGDGGFIP 377
Query: 398 NEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+ T N L+K+ + K EE V E+M + + TY+V+++ + +
Sbjct: 378 DTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFF 437
Query: 455 EEMEKK-------GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
+E+ +K G P +Y M L G+ + A F ++ +G P L+
Sbjct: 438 DELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLI 497
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 122/326 (37%), Gaps = 58/326 (17%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
KG ++K+ N +T ++ + EA + VSR P +N ++
Sbjct: 295 KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSR--GLKPNKITYNTLIQG 352
Query: 166 LGRARRFVELIQVFDEM-------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
L A++ ++ ++ + M PD T L+ + +EEA VF++ E
Sbjct: 353 LCEAQKLDKIKEILEGMVGDGGFIPDTC---TLNTLIKAHCTMGKLEEAFSVFEKMSELR 409
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDI------KTMNIILNGWCVL 270
D + + L+ LC+ AE FF+ +EK +D+ N + C
Sbjct: 410 VQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSN 469
Query: 271 GNVYEAKRFWKDIIKSKCE----------------------------------PDSVTYA 296
G +A+R ++ ++K + PD+ TY
Sbjct: 470 GKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYG 529
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
++ L KKG A + + M + P + I+ AL K E+ +++ M R
Sbjct: 530 LMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLER 589
Query: 357 GCLPNVT----TYNSLIKHLCKIKRM 378
N+ T L+ LC+ +++
Sbjct: 590 RIRQNIDLSTHTMEELVSFLCQSRKL 615
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 119/271 (43%), Gaps = 17/271 (6%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNE----- 188
E A++ F+ +S E P S ++ ++ L + F + FDE+ + L+++
Sbjct: 396 EEAFSVFEKMS-ELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKP 454
Query: 189 --KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
Y + + ++A VF + + G D S ++ L+L CR E +
Sbjct: 455 LVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPS-YKTLILGHCREGTPEAGFDLL 513
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ +F D +T ++++G G+ A + + ++KS P + + + + AL +K
Sbjct: 514 VLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEK 573
Query: 306 GKLGTALRLFQAMWEKGRKPDV----VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
G + L + M E+ + ++ T ++ LC +++ EA ++L + +
Sbjct: 574 GCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVD 633
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+ +++I LCK ++ + E+ +K
Sbjct: 634 IDMCSTVISGLCKAHKVSEAFALYYELVEKG 664
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 176/388 (45%), Gaps = 52/388 (13%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
VFN +L+VL + L V++EM PD+V T L+ AH V A+ +
Sbjct: 164 VFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVV---TLNTLIKALCRAHQVRTAVLML 220
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVA----ETFFESEKNEFGYDIKTMNIILNGW 267
+ G D + F L+ +E A E+ + G T+N+++NG+
Sbjct: 221 EEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGV---TVNVLINGY 277
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C +G V +A + + I EPD VTY TFV+ L + G + AL++ M ++G PDV
Sbjct: 278 CKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDV 337
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T N +I+ L + EA ++ +M +RGCLP+ TT+N+LI L R+E + E
Sbjct: 338 FTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARE 397
Query: 388 M---------------------------------EQKNGSCLPNEITFNYLLK---SLKK 411
+ E K+ C P+E+T+N L+ S+ K
Sbjct: 398 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGK 457
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
+L ME NGC ST TYN I+ ++ +++M+ +G+ ++
Sbjct: 458 LGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNT 517
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+I GL R++DA +M +G+ P
Sbjct: 518 LIDGLCKAKRIDDATELIEQMVKEGLQP 545
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 172/365 (47%), Gaps = 21/365 (5%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P +N + L + ++V D M PD+ TY ++N + ++
Sbjct: 298 FEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVF---TYNTVINCLSKNGELD 354
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
EA G+ ++ + G L D + F L++ L +E A + E D+ T NI++
Sbjct: 355 EAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILI 414
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N C +G+ + R ++++ S C PD VTY ++ L GKLG AL L M G
Sbjct: 415 NALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCP 474
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
VT N IIDALC K RI EA EV +M +G + T+N+LI LCK KR++ E
Sbjct: 475 RSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATEL 534
Query: 385 LDEMEQKNGSCLPNEITFNYLLK------SLKKPEEVPWVLERMERNGCKMSTDTYNVIL 438
+++M ++ PN IT+N +L ++KK + +LE M NG ++ TY ++
Sbjct: 535 IEQMVKE--GLQPNNITYNSILTHYCKQGNIKKAAD---ILETMTANGFEIDVVTYGTLI 589
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
M KG+ P ++Y +I L+ + L DAL+ F EM G
Sbjct: 590 NGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEP 649
Query: 499 PEPRT 503
P+ T
Sbjct: 650 PDALT 654
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 146/322 (45%), Gaps = 18/322 (5%)
Query: 102 SVSTKGEIEKALNQC-ELTL--------TDDLIVNVINRYRFDWEAAYTFFKWVSREGDY 152
++S++ +E+AL+ ELT+ T ++++N + + D F+ + G
Sbjct: 381 ALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVG-DPHLGIRLFEEMKSSG-C 438
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P +N ++D L + + + +EM + TY +++ +EEA
Sbjct: 439 TPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEE 498
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWC 268
VFD+ G F L+ LC+ K ++ A E K + T N IL +C
Sbjct: 499 VFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYC 558
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
GN+ +A + + + E D VTY T +N L K G+ AL+L + M KG +P
Sbjct: 559 KQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPK 618
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK-IKRMETVYEYLDE 387
N +I +L + + +AL + REM G P+ TY + + LC+ ++ +++L E
Sbjct: 619 AYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVE 678
Query: 388 MEQKNGSCLPNEITFNYLLKSL 409
M K +P +F L + L
Sbjct: 679 MVNK--GFMPEFSSFRMLAEGL 698
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 41/261 (15%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
+ D+V + +N L + KL ++ M +G +PDVVT N +I ALC ++ A+
Sbjct: 159 QADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVL 218
Query: 349 VLREMKNRGCLPNVTTY-----------------------------------NSLIKHLC 373
+L EM + G P+ TT+ N LI C
Sbjct: 219 MLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYC 278
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME---RNGCKMS 430
K+ R+E Y+ + E +G P+++T+N + L + V L+ M+ + G
Sbjct: 279 KMGRVEDALGYIQQ-EIADG-FEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPD 336
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TYN ++ D+ + +M +G PD ++ +I L + RLE+AL
Sbjct: 337 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAR 396
Query: 491 EMRLKGMVPEPRT-GILVNDM 510
E+ +KG+ P+ T IL+N +
Sbjct: 397 ELTVKGLSPDVYTFNILINAL 417
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 7/183 (3%)
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G + D V N +++ L ++ V EM RG P+V T N+LIK LC+ ++ T
Sbjct: 157 GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTA 216
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVIL 438
L+EM P+E TF L++ + + L +M GC + T NV++
Sbjct: 217 VLMLEEMSSH--GVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLI 274
Query: 439 KLYVNWD-CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
Y ED + + +E+ G PDQ +Y +HGL G + AL M +G
Sbjct: 275 NGYCKMGRVEDALGYIQQEI-ADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGH 333
Query: 498 VPE 500
P+
Sbjct: 334 DPD 336
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 229/505 (45%), Gaps = 33/505 (6%)
Query: 21 KFHSQLTTQFSKLQSCNSVTSHKTLIPIIN--------LQARNSEFLF---LGRIETAQL 69
+FH Q T ++CN+ + H T N + A S +L +G ++ Q
Sbjct: 67 RFHRQYT---PTTKTCNNSSRHDTFTKSHNNFSRYHRFVSANTSLYLLFCHVGAVDIYQR 123
Query: 70 VHSLANSDEKSEFQRYPGDEIAINVQ---NILKTCSVSTKGEIE----KALNQCELTLTD 122
+ N S+ R A+ VQ + K C + + E LN L
Sbjct: 124 KYPTKNGFNPSKSLRAKASANALVVQQEDTVNKICKAIEEDQWECLQDNFLNSMAQDLNP 183
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM 182
D +V V+N + D + A FF+W ++ Y ++ + ++D+LGRA+ F EL + +M
Sbjct: 184 DAVVKVLN-LQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKM 242
Query: 183 PDLVNEKTYGIL---LNRYAAAHMVEEAIGVFDRRKEFGELDDL--SAFQNLLLWLCRYK 237
E T +L + Y + +E++ F+ KE G L +A+ ++L+ L + K
Sbjct: 243 QTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNK 302
Query: 238 HVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
+++AE F N + T ++ + + + +A + D+I++ PD VTY
Sbjct: 303 KLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYT 362
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
++AL K+ + A + Q M E G +P++ T N +I LC +R EALE++ M+
Sbjct: 363 IVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQG 422
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE--- 413
G PN+ TY L LCK++R++ E +E + PN +T+N LL +
Sbjct: 423 GVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALAR--GLKPNRVTYNTLLNGYCRGSRLI 480
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
E +L+ M +N C TY +++ V + +EME KG + + ++
Sbjct: 481 EAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILA 540
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMV 498
GL G +DA ++ M+ +G
Sbjct: 541 RGLARVGNHKDASIFYRRMKDRGFA 565
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 157/340 (46%), Gaps = 11/340 (3%)
Query: 174 ELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
+ +++ D+M PD+V TY I+++ M+E+A GV + +E G ++ +
Sbjct: 341 DAMKLLDDMIQNNYAPDVV---TYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYN 397
Query: 228 NLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
L+ LC + E A E E+ +I T I+ +G C L + AK + + +
Sbjct: 398 ALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALAR 457
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
+P+ VTY T +N + +L A+ + + M + PD VT +I L ++P+A
Sbjct: 458 GLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDA 517
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN-YL 405
L + EM+N+G N T N L + L ++ + + M+ + + ++ +
Sbjct: 518 LRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHC 577
Query: 406 LKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L + + EE +L M G + TYN ++K + D M + G+GPD
Sbjct: 578 LSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPD 637
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
SY ++I +++GR +DA + +G+V P+ I
Sbjct: 638 TGSYNILIKEFHNQGRTQDADQLYATALERGVVLNPKPVI 677
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 134/303 (44%), Gaps = 11/303 (3%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVE----LIQVFDEMPDLVNEKTYGILLNRYAAAHMV 204
+ +Y+P + ++ L + R+ +E ++Q E N TY L+ A
Sbjct: 351 QNNYAPDVVTYTIVISALCK-RKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRP 409
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNII 263
EEA+ + ++ G ++ + L LC+ + ++ A E F E+ + T N +
Sbjct: 410 EEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTL 469
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
LNG+C + EA K++ ++ C PD VTY T + L + +L ALR+ M KG
Sbjct: 470 LNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGY 529
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+ T N + L +A R MK+RG + + Y I L ME
Sbjct: 530 DVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQA 589
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
L EM K S PN T+N ++K + ++ +L M NG T +YN+++K
Sbjct: 590 LLYEMINKGYS--PNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKE 647
Query: 441 YVN 443
+ N
Sbjct: 648 FHN 650
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 10/215 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N +L+ R R +E + + EM PD V TY L+ + + +A
Sbjct: 461 PNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHV---TYTTLIQGLVQGNQLPDA 517
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
+ + D + G + L L R + + A F+ K+ F Y + ++
Sbjct: 518 LRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHC 577
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
G + EA+ ++I P+ TY T + ++G+L A + M E G PD
Sbjct: 578 LSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPD 637
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+ N +I + R +A ++ RG + N
Sbjct: 638 TGSYNILIKEFHNQGRTQDADQLYATALERGVVLN 672
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 7/247 (2%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
Y T ++ L + L Q M +GR+ + + + R E+LE M
Sbjct: 218 AYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLM 277
Query: 354 KNRGCLPNV--TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-- 409
K G P + T YNS++ L K K+++ +M SC N +T+ +++
Sbjct: 278 KEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSC--NNLTYTSMIQCFFL 335
Query: 410 -KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
+K E+ +L+ M +N TY +++ ++ ++M + G P+ +
Sbjct: 336 KEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYT 395
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLT 528
Y +I GL R E+AL M G+ P T ++ KL+ + +
Sbjct: 396 YNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEAL 455
Query: 529 SLGLKGN 535
+ GLK N
Sbjct: 456 ARGLKPN 462
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 180/362 (49%), Gaps = 17/362 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + E + + D+M PDLV TYG ++N
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV---TYGTVVNGLCKRG 237
Query: 203 MVEEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTM 260
++ A+ + ++ E G+++ D+ + ++ LC+YKH++ A F E + D+ T
Sbjct: 238 DIDLALSLL-KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+ +++ C G +A R D+I+ K P+ VT++ ++A K+GKL A +L+ M +
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+ PD+ T + +I+ C R+ EA + M ++ C PNV TY++LIK CK KR+E
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
E EM Q+ + N +T+ L+ + + V ++M G + TYN++
Sbjct: 417 GMELFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
L K +E +++ M PD +Y +MI G+ G++ED F + LKG+
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 498 VP 499
P
Sbjct: 535 SP 536
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 156/349 (44%), Gaps = 41/349 (11%)
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
LL+ A + E I + ++ + G DL + + CR + +A ++ +
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL-AKMMKL 147
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
GY DI T++ +LNG+C + +A +++ +PD+ T+ T ++ L K A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ L M ++G +PD+VT +++ LC + I AL +L++M+ +V YN++I
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 372 LCKIKRMETVYEYLDEMEQKN-----------GSCL----------------------PN 398
LCK K M+ EM+ K SCL PN
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 399 EITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD----TYNVILKLYVNWDCEDKVRHTW 454
+TF+ L+ + K ++ E++ K S D TY+ ++ + D D+ +H +
Sbjct: 328 VVTFSALIDAFVKEGKLVEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
E M K P+ +Y+ +I G R+E+ + F EM +G+V T
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 125/263 (47%), Gaps = 12/263 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + VE +++DEM PD+ TY L+N + ++E
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF---TYSSLINGFCMHDRLDE 381
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F+ ++ + L+ C+ K VE E F E + + T +++
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ + A+ +K ++ P+ +TY ++ L K GKL A+ +F+ + +P
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T N +I+ +C ++ + E+ + +G PNV YN++I C+ E L
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 386 DEMEQKNGSCLPNEITFNYLLKS 408
+M++ LPN T+N L+++
Sbjct: 562 KKMKEDGP--LPNSGTYNTLIRA 582
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 4/226 (1%)
Query: 164 DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
D L A+ EL+ D P++V TY L+ + A VEE + +F + G + +
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVV---TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ L+ + + + A+ F+ + + +I T NI+L+G C G + +A ++
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ +S EPD TY + + K GK+ LF + KG P+V+ N +I C K
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
EA +L++MK G LPN TYN+LI+ + E E + EM
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 92/244 (37%), Gaps = 42/244 (17%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEK 189
R D EA + F +S+ D P ++ ++ +A+R E +++F EM + N
Sbjct: 378 RLD-EAKHMFELMISK--DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY L++ + A + A VF + G ++ + LL LC+ + A FE
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVY---------------------------------- 274
+++ DI T NI++ G C G V
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 275 -EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA K + + P+S TY T + A + G + L + M G D T +
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Query: 334 IDAL 337
+ L
Sbjct: 615 TNML 618
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 187/361 (51%), Gaps = 17/361 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + FNA+++ L + E +++F+EM P+++ +Y ++N A
Sbjct: 161 PDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVI---SYTTVINGLCKTGNTSMA 217
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+ VF + ++ G ++ + ++ LC+ + V A F SE E G ++ T N I++
Sbjct: 218 VDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFL-SEMVERGIPPNVFTYNSIVH 276
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C LG + EA R +K+++ P++VT+ V+ L K+G + A +F+ M EKG +P
Sbjct: 277 GFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEP 336
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T N ++D C ++ + EA +V M +GC P +YN LI CK +RM+ L
Sbjct: 337 DISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLL 396
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
EM K + P+ +T++ L++ L +P+E + + M G + TY ++L +
Sbjct: 397 AEMYHK--ALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFC 454
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
D+ + M++K + P+ YT++I G++ G+LE A F ++ G P+ R
Sbjct: 455 KHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIR 514
Query: 503 T 503
T
Sbjct: 515 T 515
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 154/317 (48%), Gaps = 6/317 (1%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE- 249
+G L +A + + ++ F ++ + L+ LCR HV+ + +
Sbjct: 96 FGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMF 155
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K D T N ++NG C G + EA + +++K EP+ ++Y T +N L K G
Sbjct: 156 KLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTS 215
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+ +F+ M + G KP+VVT + IID+LC + + +A+E L EM RG PNV TYNS++
Sbjct: 216 MAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIV 275
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
C + ++ EM ++ +PN +TF L+ L K E V E M G
Sbjct: 276 HGFCNLGQLNEATRLFKEMVGRD--VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKG 333
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ TYN ++ Y ++ + +E M +KG P SY ++I+G R+++A
Sbjct: 334 VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAK 393
Query: 487 SYFHEMRLKGMVPEPRT 503
S EM K + P+ T
Sbjct: 394 SLLAEMYHKALNPDTVT 410
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 162/362 (44%), Gaps = 12/362 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A FK + + G P ++ I+D L + R + ++ EM + N TY ++
Sbjct: 217 AVDVFKKMEQNG-CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIV 275
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+ + + EA +F + + F L+ LC+ V A FE+ E G
Sbjct: 276 HGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFET-MTEKGV 334
Query: 256 --DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
DI T N +++G+C+ + EAK+ ++ +I+ C P + +Y +N K ++ A
Sbjct: 335 EPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKS 394
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
L M+ K PD VT + ++ LC R EAL + +EM + G PN+ TY L+ C
Sbjct: 395 LLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFC 454
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMS 430
K ++ + L M++K PN + + L++ + K E + ++ +G +
Sbjct: 455 KHGHLDEALKLLKSMKEKKLE--PNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPD 512
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TY V++K + D+ + +ME G P+ SY VMI G A+
Sbjct: 513 IRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLID 572
Query: 491 EM 492
EM
Sbjct: 573 EM 574
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 136/296 (45%), Gaps = 10/296 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A F+ ++ +G P + +NA++D R E +VF+ M +Y IL+
Sbjct: 322 ARLVFETMTEKG-VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILI 380
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
N Y + ++EA + D + L+ LC+ + A F+ E +G
Sbjct: 381 NGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFK-EMCSYGP 439
Query: 256 --DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
++ T I+L+G+C G++ EA + K + + K EP+ V Y + + GKL A
Sbjct: 440 HPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKE 499
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
LF ++ G +PD+ T +I L + EA ++ R+M++ G LPN +YN +I+
Sbjct: 500 LFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFL 559
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKM 429
+ + T +DEM K S N TF LL L+ +E+ R G KM
Sbjct: 560 QNQDSSTAIRLIDEMVGKRFSV--NLSTFQMLL-DLESQDEIISQFMRGSSQGRKM 612
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 48/241 (19%)
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
AL F M +P VV + + KK+ + + +M NV + N LI
Sbjct: 77 ALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILIN 136
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--------------------K 410
LC++ ++ L +M + P+ ITFN L+ L
Sbjct: 137 CLCRLNHVDFSVSVLGKMFKL--GIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH 194
Query: 411 KPEEVPW------------------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
+P + + V ++ME+NGCK + TY+ I ++ C+D++ +
Sbjct: 195 EPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTI----IDSLCKDRLVN 250
Query: 453 T----WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVN 508
EM ++G+ P+ +Y ++HG + G+L +A F EM + ++P T ++
Sbjct: 251 DAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILV 310
Query: 509 D 509
D
Sbjct: 311 D 311
>gi|293332689|ref|NP_001168961.1| hypothetical protein [Zea mays]
gi|223974035|gb|ACN31205.1| unknown [Zea mays]
gi|413921836|gb|AFW61768.1| hypothetical protein ZEAMMB73_696968 [Zea mays]
Length = 521
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 178/350 (50%), Gaps = 6/350 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVF 211
P ++ + G+ARRF ++ M + ++ + IL+ RYAAA V +AI F
Sbjct: 134 PPPEAWHLAVWAAGKARRFDLAWEIVRRMRNRGVLTCRVMVILMERYAAASEVNKAIKTF 193
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC-VL 270
D ++F D S F +LL LC+ K++E AE K F + NIIL+GWC V+
Sbjct: 194 DVMEKFKIESDQSVFYSLLHALCKIKNIEDAEELLFLRKKFFPLTAEGFNIILDGWCNVI 253
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
+V EAKR W+++ PD ++Y ++ +K G L LR++ M ++G P +V
Sbjct: 254 TDVAEAKRVWREMSNHCITPDGMSYTLMISCFSKVGNLFDTLRVYDEMKKRGWIPGIVVY 313
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N ++ L + + +A + ++ + G P+V TYN++I LC+ +++ + ++ M
Sbjct: 314 NSLVYVLTRENCVKDAHNIFSKLTDEGLQPDVETYNNMIVPLCESCKLDEARKVMESMIL 373
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
+ +P T++ LK E + +L++M+ +GC +DT+ +++ + +
Sbjct: 374 RG--IVPTISTYHAFLKQEGIDESLK-LLQKMKEDGCGPKSDTFVMLIDKFFLLNESGNA 430
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
W EM K + P + Y ++ GL G + AL Y+ EM+ KG +
Sbjct: 431 LRVWNEMRKYEISPVRAHYMTLVQGLVKHGCIPRALEYYDEMKEKGFASD 480
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 193/385 (50%), Gaps = 30/385 (7%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE---LIQVFDEMPDLVNEKTYG 192
WE A F + G P + ++D+L + + +E L++V + +++ T
Sbjct: 509 WEKAKCLFNEMLDVG-IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCT 567
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE---SE 249
L+ H + +A +F + ++ G + ++ L+ LC+ ++++A + S+
Sbjct: 568 TLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSD 627
Query: 250 KNEFGYDIK----TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ +G + K + +II++G C G EA+ +K++ PD ++Y + ++ +
Sbjct: 628 TSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRS 687
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK A LF M + G +PDV T + +ID LC + ++ EA E+L M RGC+PN TY
Sbjct: 688 GKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTY 747
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERN 425
+L+K LC R+ + +M QK G CLP+ +T+ L+K L + + LE +
Sbjct: 748 TTLVKGLCMNDRISEATQLFMKM-QKLG-CLPDVVTYGTLMKGLCQTGNIKTALELHK-- 803
Query: 426 GCKMSTDT-------------YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
KM +DT Y++I+ ED+ R ++EM+ G+ P+ SYT +
Sbjct: 804 --KMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSL 861
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGM 497
IHG G+LEDA F+EM +G+
Sbjct: 862 IHGFCRSGKLEDAKHLFNEMVDQGV 886
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 187/380 (49%), Gaps = 23/380 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVE---LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P + ++D+L + + +E L++V + +++ TY L+ H + EA +
Sbjct: 345 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 404
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG-YDIK------TMNII 263
F ++ G D + L+ LC+ ++ +A + N+ G Y IK + +II
Sbjct: 405 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 464
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++G C EA+ ++++ PD ++Y T ++ GK A LF M + G
Sbjct: 465 IDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGI 524
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+PDV T + +ID LC K ++ EA ++L + RGC+ +V T +L+K LC R+ +
Sbjct: 525 QPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQ 584
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERN----------GCKMSTDT 433
+M QK G C+PN +T L+K L + + LE + +N CK + +
Sbjct: 585 LFLKM-QKLG-CMPNVVTCATLMKGLCQSGNIKIALE-LHKNMLSDTSPYGINCKPNAIS 641
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y++I+ ED+ R ++EM+ G+ PD SYT +IHG G+ +DA F+EM
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 701
Query: 494 LKGMVPEPRTGILVNDMNIK 513
G+ P+ T ++ DM K
Sbjct: 702 DIGVQPDVTTFSVLIDMLCK 721
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 169/408 (41%), Gaps = 88/408 (21%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
++ I+D L + RR E ++F EM PD++ +Y L++ + + E+A +F+
Sbjct: 168 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVI---SYTSLIHGFCHSGKWEKAKCLFN 224
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG-YDIKTMNIILNGWCVLG 271
+ G D++ L+ C+ V A E + DI T + ++ G C+
Sbjct: 225 EMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKH 284
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE-------KGRK 324
+ EA + + + K C PD++ Y T + L + GK+ AL L Q M K +
Sbjct: 285 RISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIR 344
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL------------------------- 359
PDV T + +ID LC + ++ EA E+L M RGC+
Sbjct: 345 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 404
Query: 360 ----------PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG----SCLPNEITFNYL 405
P+ TY +L+K LC+ + + EM G C P I+++ +
Sbjct: 405 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 464
Query: 406 LKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
+ L K ED+ R +EEM+ +G+ PD
Sbjct: 465 IDGLCKDRR--------------------------------EDEARELFEEMKAQGIMPD 492
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
SYT +IHG G+ E A F+EM G+ P+ T ++ DM K
Sbjct: 493 VISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCK 540
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 173/374 (46%), Gaps = 30/374 (8%)
Query: 154 PGSNVFNAILDVLGRARRFVE---LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P + ++D+L + + +E L++V + +++ TY L+ H + EA +
Sbjct: 52 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 111
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG-YDIK------TMNII 263
F ++ G D + L+ LC+ ++ +A + N+ G Y IK + +II
Sbjct: 112 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 171
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++G C EA+ +K++ PD ++Y + ++ GK A LF M + G
Sbjct: 172 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGI 231
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+PDV T +ID C + ++ EA E+L M +RGC+ ++ TY++LIK LC R+ +
Sbjct: 232 QPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQ 291
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILK---- 439
M K C P+ I + L+K L + ++ L + +M DT +K
Sbjct: 292 LF--MSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQ----EMLNDTSQYGIKCIRP 345
Query: 440 ------LYVNWDC-EDKVRHTWEEME---KKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ ++ C E KV E +E ++G D +Y+ +I GL + R+ +A F
Sbjct: 346 DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 405
Query: 490 HEMRLKGMVPEPRT 503
M+ G P+ T
Sbjct: 406 MSMQKLGCRPDAIT 419
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 119/242 (49%), Gaps = 20/242 (8%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR---------KPDVVTCNCIIDALCFK 340
PDS T+ +N L ++ L + +G +PDV T + +ID LC +
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
++ EA E+L M RGC+ ++ TY++LIK LC R+ M QK G C P+ I
Sbjct: 68 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSM-QKLG-CRPDAI 125
Query: 401 TFNYLLKSLKKPEEVPWVL----ERMERNG-----CKMSTDTYNVILKLYVNWDCEDKVR 451
T+ L+K L + + L E + G CK + +Y++I+ ED+ R
Sbjct: 126 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 185
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
++EM+ +GM PD SYT +IHG G+ E A F+EM G+ P+ T ++ DM
Sbjct: 186 ELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMF 245
Query: 512 IK 513
K
Sbjct: 246 CK 247
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 184/404 (45%), Gaps = 41/404 (10%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE--MPDLV-NEKTY 191
D +AA FF W S++ + +N + + L RARR E + P + N TY
Sbjct: 3 DPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTY 62
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
+++ + +++A + + +E G + D + + ++ LC+ ++ A +F S +
Sbjct: 63 AVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMEC 122
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
E ++ T I+++G C + EA ++ + K P+ TY +N K K+ A
Sbjct: 123 E--KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 180
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L + M E G P+VVT + +I C + ++ A ++ R+M GC+PN+ TYN+L+
Sbjct: 181 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 240
Query: 372 LCKIKRMETVYEYLDEMEQK---------------------------------NGSCLPN 398
LC+ M+ YE LDEM ++ NG C P+
Sbjct: 241 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 300
Query: 399 EITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+ ++ L+ L K +E + E+M N C+ T+ ++ D + + E
Sbjct: 301 VVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 360
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
ME + P+ +Y+ +I GL G++ DA F M ++G+ P
Sbjct: 361 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEP 404
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 193/407 (47%), Gaps = 16/407 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY K + +E +P ++ ++ R + ++F +M P+LV TY
Sbjct: 180 AYLLLKEM-KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLV---TYN 235
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN- 251
LL+ +++EA + D +E G D ++ L+ LC+ +++A FE N
Sbjct: 236 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 295
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ D+ + ++ G C G + EA + ++ + ++ CEPD VT+ ++ L K +L A
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 355
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++ + M ++ P+V+T + +ID LC ++ +A EV + M RG PNV TYNSLI
Sbjct: 356 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 415
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCK 428
C +++ ++EM CLP+ IT+N L+ L K P + M+ C
Sbjct: 416 FCMTNGVDSALLLMEEMTAT--GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCN 473
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TY+ ++ + + D R +++M K+ + PD +++ ++ G + G ++DA
Sbjct: 474 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 533
Query: 489 FHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
EM P+ T + D K+ E + + ++ G + N
Sbjct: 534 LEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPN 580
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 173/377 (45%), Gaps = 26/377 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A T+F + ++G P +N +++ + + + EM P++V TY
Sbjct: 145 ATTYFAKMKKKGTV-PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVV---TYS 200
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES---- 248
+++ + V+ A +F + E G + +L + LL LCR ++ A +
Sbjct: 201 TVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRER 260
Query: 249 --EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ ++F YD ++ G C G + A + ++D C PD V Y+T + L K G
Sbjct: 261 GLQPDKFSYDT-----LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+L A +LF+ M E +PDVVT ++D LC R+ EA +VL M++R C PNV TY+
Sbjct: 316 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 375
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERME 423
SLI LCK ++ E M + PN +T+N L+ V L E M
Sbjct: 376 SLIDGLCKTGQVRDAQEVFKRMIVRGIE--PNVVTYNSLIHGFCMTNGVDSALLLMEEMT 433
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
GC TYN ++ + + +M+ K PD +Y+ +I G R++
Sbjct: 434 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 493
Query: 484 DALSYFHEMRLKGMVPE 500
A + F +M + ++P+
Sbjct: 494 MARTLFDDMLKQAVLPD 510
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 170/362 (46%), Gaps = 15/362 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVF------DEMPDLVNEKTYGILLNRYAAA 201
RE P ++ ++ L + + ++VF D PD+V Y L+ A
Sbjct: 258 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV---AYSTLIAGLCKA 314
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTM 260
++EA +F++ +E D+ F L+ LC+ ++ A+ E+ E ++ T
Sbjct: 315 GRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 374
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+ +++G C G V +A+ +K +I EP+ VTY + ++ + +AL L + M
Sbjct: 375 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 434
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G PD++T N +ID LC R PEA + +MK + C P+V TY+ LI CK++R++
Sbjct: 435 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDM 494
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVI 437
D+M ++ + LP+ +TF+ L++ ++ +LE M + C TY +
Sbjct: 495 ARTLFDDMLKQ--AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 552
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + + R + M K+G P+ +YT +I G+ A EM G+
Sbjct: 553 VDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGV 612
Query: 498 VP 499
P
Sbjct: 613 QP 614
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 163/346 (47%), Gaps = 15/346 (4%)
Query: 150 GDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHM 203
GD P ++ ++ L +A R E ++F++M PD+V T+ L++
Sbjct: 295 GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVV---TFTALMDGLCKGDR 351
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNI 262
++EA V + ++ ++ + +L+ LC+ V A+ F+ ++ T N
Sbjct: 352 LQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNS 411
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++G+C+ V A +++ + C PD +TY T ++ L K G+ A RLF M K
Sbjct: 412 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 471
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDV+T +C+I C +RI A + +M + LP+V T+++L++ C ++
Sbjct: 472 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 531
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILK 439
L+EM + C P+ T+ L+ K E VL+RM + GC+ + TY ++
Sbjct: 532 RLLEEMVASD--CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALID 589
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
+ EEM G+ P+ +Y +I G G LE+A
Sbjct: 590 AFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 635
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 153/317 (48%), Gaps = 11/317 (3%)
Query: 182 MPDLVNEKTYGILLNRYAAAHMVEEAIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
+PD++ TY L++ EA +F D + +F D ++ + L+ C+ + ++
Sbjct: 438 LPDII---TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVIT-YSCLIGGFCKLERID 493
Query: 241 VAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
+A T F+ K D+ T + ++ G+C G V +A+R ++++ S C PD TY + V
Sbjct: 494 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLV 553
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ K G++ A R+ + M ++G +P+VVT +IDA C + A +L EM G
Sbjct: 554 DGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQ 613
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
PNV TY SLI C +E + L+ +E ++ +C + + ++ L + + L
Sbjct: 614 PNVITYRSLIGGFCGTGDLEEARKILERLE-RDENCKADMFAYRVMMDGLCRTGRMSAAL 672
Query: 420 ERME---RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME-KKGMGPDQRSYTVMIHG 475
E +E ++G D Y +++ K EEM + P+ +Y +I
Sbjct: 673 ELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQE 732
Query: 476 LYDKGRLEDALSYFHEM 492
L +GR E+A + E+
Sbjct: 733 LAREGRHEEANALADEL 749
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 6/228 (2%)
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
A R +E + D PD+ TY L++ + + EA V R + G ++ +
Sbjct: 530 AERLLEEMVASDCSPDVY---TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTA 586
Query: 229 LLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
L+ CR VA E N ++ T ++ G+C G++ EA++ + + + +
Sbjct: 587 LIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDE 646
Query: 288 -CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
C+ D Y ++ L + G++ AL L +A+ + G P +I LC K + +A
Sbjct: 647 NCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKA 706
Query: 347 LEVLREMK-NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
+EVL EM +R PN Y ++I+ L + R E DE+ G
Sbjct: 707 MEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGNKG 754
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 39/201 (19%)
Query: 310 TALRLFQ-AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
ALR F A ++G +V T N + +AL +RI E +L+ G PNV TY +
Sbjct: 6 AALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVV 65
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
I+ LCK ++ E L+EM + +P+ +N+++ +L K RN K
Sbjct: 66 IQGLCKSGDLDKACELLEEMRESGP--VPDAAIYNFVIHALCKA-----------RNTAK 112
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
L + + +CE V TW T+MI GL RL +A +Y
Sbjct: 113 A--------LDYFRSMECEKNV-ITW---------------TIMIDGLCKANRLPEATTY 148
Query: 489 FHEMRLKGMVPEPRT-GILVN 508
F +M+ KG VP T +L+N
Sbjct: 149 FAKMKKKGTVPNEWTYNVLIN 169
>gi|255551140|ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544438|gb|EEF45959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 577
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 207/432 (47%), Gaps = 16/432 (3%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E AL+Q + L+ V + + + ++ F W ++ ++ + +FN++++ LG+
Sbjct: 76 LETALDQTGIKPETSLLNAVFDHFNSSPKLLHSLFVWADKQPEFESSTTLFNSVINALGK 135
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL---SA 225
+ F + + LV+ T+ IL+ RY A M + AI F+ + D +
Sbjct: 136 MKEFDSAWCLVLDRTGLVSSDTFAILIRRYTRAGMPQSAIRTFEYAISLDFICDYNCDAL 195
Query: 226 FQNLLLWLCRYKHVEVAETFFESEK---NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ LL LC+ HV VA+ +F+S K + + ++ NI+LNGW + A+R W +
Sbjct: 196 LEILLDSLCKEGHVRVAKEYFDSRKQLDSCWIPHVRIYNIMLNGWFRSRKLKHAERLWLE 255
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ K+ P VTY T V + ++ A+ L M ++G +P+ + N IIDAL + R
Sbjct: 256 MKKNNVSPSVVTYGTLVEGYCRMRRVERAIELVDVMRKEGIEPNALVYNPIIDALAEEGR 315
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
E ++ P ++TYNSL+K CK K + L M + +P T+
Sbjct: 316 FKEVSGMMEYFLQSESGPTISTYNSLVKGYCKAKDPVGASKVLKMMISRG--FVPTPTTY 373
Query: 403 NYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
NY + K EE + +M +G T++++LK+ + D +EM
Sbjct: 374 NYFFRHFSKFGMIEEGMNLYTKMIESGYTPDRLTFHLLLKMLCEEERLDLAVQISKEMRS 433
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG- 518
+G D + T++IH R E+A F +M KG+VP+ T +ND +L++RG
Sbjct: 434 RGCDMDLATSTMLIHLFCRMHRFEEAFMEFEDMIQKGIVPQYLTFQRLND---ELRKRGM 490
Query: 519 -EQGKKVIKLTS 529
E+ +K+ + S
Sbjct: 491 VERARKLSDMMS 502
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 186/382 (48%), Gaps = 20/382 (5%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVF-NAILDVLGRARRFVELIQVFDEM-------PDLV 186
D AY K + R G P + + N ++ L AR+ +++F EM PD+
Sbjct: 892 DIGTAYELLKEMPRHG--VPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVF 949
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
TY +++ + V++A + + G ++ + +LL LC+ ++ A
Sbjct: 950 ---TYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 1006
Query: 247 ES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ ++ +I T N I++G C LG + EA ++++ C+P+ VTY ++A K
Sbjct: 1007 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 1066
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK A+ L + M EKG P++ T N ++D C K + A ++L M +GC+PNV +Y
Sbjct: 1067 GKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSY 1126
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RM 422
N++I LCK ++ L++M N C+P+ +TFN ++ ++ K V E +
Sbjct: 1127 NTVIAGLCKATKVHEGVLLLEQMLSNN--CVPDIVTFNTIIDAMCKTYRVDIAYELFNLI 1184
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK-GMGPDQRSYTVMIHGLYDKGR 481
+ +GC + TYN ++ D+ + EM +K G PD +Y +I GL R
Sbjct: 1185 QESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKR 1244
Query: 482 LEDALSYFHEMRLKGMVPEPRT 503
++ A F +M G+ P+ T
Sbjct: 1245 VDRAYKLFLQMLSDGLAPDDVT 1266
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 180/396 (45%), Gaps = 42/396 (10%)
Query: 110 EKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRA 169
E AL + LT ++ V+ R + +AA FF W + + Y+ + N +L L R
Sbjct: 799 ETALERFTGKLTTTVVGKVLQGVR-NGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRL 857
Query: 170 RRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL 229
+R + +QV+ R + ++ F L
Sbjct: 858 KRPKDALQVY----------------------------------RNKLCCSPNMFTFTIL 883
Query: 230 LLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS-K 287
+ LCR + A E E ++ ++ N+++ G C + A +K++ +S
Sbjct: 884 IHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGS 943
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
C PD TY+T V++L K GK+ A RL + M KG P+VVT + ++ LC ++ EA
Sbjct: 944 CPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEAT 1003
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+L+ M GC PN+ TYN++I CK+ R++ Y L+EM +G C PN +T+ LL
Sbjct: 1004 ALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEM--VDGGCQPNVVTYTVLLD 1061
Query: 408 SL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
+ K E+ ++E M G + TYN +L ++ D ++ M +KG P
Sbjct: 1062 AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 1121
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ SY +I GL ++ + + +M VP+
Sbjct: 1122 NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 1157
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 167/368 (45%), Gaps = 16/368 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D + A + ++ G Y P + +N I+ V R QV M PD +N
Sbjct: 350 DLDGAVELVRKMTERG-YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAIN- 407
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE- 247
Y +++ + A + EA + ++ G D++ L+ LC+ ++ A+
Sbjct: 408 --YSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRM 465
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
S + D+ +I+++ C + EA+ + ++K++C PD VTY + V+ L K +
Sbjct: 466 SIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRR 525
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A LF M G PDVVT + +I + C + A ++L MK C+P+V TY++
Sbjct: 526 INDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSA 585
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMER 424
LI LCK ++ ++ EM C PN +T+N L+ L K E+ +LE M +
Sbjct: 586 LINGLCKAGTVDKAFDVFQEM--LGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRK 643
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
C + TY ++ N ++ EM+ KG PD+ +Y ++ L LE
Sbjct: 644 QSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLEL 703
Query: 485 ALSYFHEM 492
EM
Sbjct: 704 VEQLLKEM 711
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 162/373 (43%), Gaps = 42/373 (11%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+ A + ++R G SP +N I+D + R E + +EM D N TY +
Sbjct: 1000 DEATALLQRMTRSG-CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 1058
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
LL+ + E+AIG+ + E G + +L + +LL C+ VE A S
Sbjct: 1059 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSS----- 1113
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
+I+ C P+ V+Y T + L K K+ +
Sbjct: 1114 -----------------------------MIQKGCVPNVVSYNTVIAGLCKATKVHEGVL 1144
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
L + M PD+VT N IIDA+C R+ A E+ ++ GC PN+ TYNSL+ LC
Sbjct: 1145 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 1204
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMS 430
K +R + L EM +K G C P+ IT+N ++ L K + V + +M +G
Sbjct: 1205 KSRRFDQAEYLLREMTRKQG-CSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPD 1263
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TY++++ W D+ + E M K G P +Y +I G G L+ AL
Sbjct: 1264 DVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ 1323
Query: 491 EMRLKGMVPEPRT 503
+ KG P+ T
Sbjct: 1324 LLLSKGSYPDVVT 1336
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 190/422 (45%), Gaps = 43/422 (10%)
Query: 84 RYPGDEIAINV-QNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTF 142
R+ G + I+V + I++ S + + AL++ L+ +++ V+ R D AA F
Sbjct: 56 RWVGSDSPISVLERIVQ--GASDEQALRVALDEYRGQLSPEIVGKVLQRL-IDPGAALVF 112
Query: 143 FKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAH 202
F+W Y N +L+VL +A ++Y+ AH
Sbjct: 113 FEWAETRDGYQHEIFCCNCLLNVLVKA--------------------------HQYSQAH 146
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMN 261
+F R E D + L+ R + A E F E +
Sbjct: 147 ------DLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHK 200
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
IL G C G +A ++++ K+ C PDSVTY T +N L+K +L A+RL + M +
Sbjct: 201 SILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDN 259
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P+V + N ++ C R+ AL +L +M RGC P+V +Y ++I LCK+ +++
Sbjct: 260 GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEA 319
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVIL 438
+D+M Q+ C PN IT+ L+ + ++ +E +M G + + TYN I+
Sbjct: 320 CRVMDKMIQRG--CQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 377
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
++ + ++ + M + G PD +Y+ +I G G+L +A +M +G
Sbjct: 378 HVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCR 437
Query: 499 PE 500
P+
Sbjct: 438 PD 439
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 167/351 (47%), Gaps = 21/351 (5%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
I++V R R D E A+ + + + G P + ++ I+ +A + E + ++M
Sbjct: 376 IMHVFCR-RNDMERAHQVLQMMIQTG-CPPDAINYSTIISGFCKAGKLREAHDLLEQMIR 433
Query: 183 ----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGE--LDDLSAFQNLLLWLCRY 236
PD+ T L + AA +E + R G D+ A+ L+ LC+
Sbjct: 434 RGCRPDVACLSTLIDALCKAAAIDSAQELL-----RMSIGMDCAPDVVAYSILIHALCKA 488
Query: 237 KHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
K + AE++ + KN D+ T N +++G C + +A + + + PD VTY
Sbjct: 489 KRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTY 548
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+ +++ K L +A ++ + M E PDVVT + +I+ LC + +A +V +EM
Sbjct: 549 SIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLG 608
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKP 412
GC PN+ TYN+LI LCKI ++E E L+ M ++ SC P+ IT+ L+ L +
Sbjct: 609 CGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQ--SCTPDSITYTCLINGLCNASRL 666
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
EE VL M+ GC TY +L+ + + V +EME G
Sbjct: 667 EEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEG 717
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 176/404 (43%), Gaps = 38/404 (9%)
Query: 114 NQC--ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARR 171
N C ++ + +I + YR D AY F + G +P +N+++ L ++RR
Sbjct: 1152 NNCVPDIVTFNTIIDAMCKTYRVD--IAYELFNLIQESG-CTPNLVTYNSLVHGLCKSRR 1208
Query: 172 FVELIQVFDEM-------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
F + + EM PD++ TY +++ + V+ A +F + G D
Sbjct: 1209 FDQAEYLLREMTRKQGCSPDII---TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 1265
Query: 225 AFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
+ ++ LC+++ ++ A E KN F T +++G+C GN+ +A + +
Sbjct: 1266 TYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLL 1325
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+ PD VT++ F++ L+K+G+L A L + M G PD VT N ++ C
Sbjct: 1326 LSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLT 1385
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
+A+++ M+ GC P+ TY +L+ HL K + + + + G L +E++
Sbjct: 1386 EDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSK 1445
Query: 404 Y------------------LLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ P++ V E M++ + ++ +L +YV
Sbjct: 1446 LEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVL----WSAMLGVYVFHK 1501
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
E++ W M +G+ PD ++ ++ G L+ A+ F
Sbjct: 1502 QEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEF 1545
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 8/268 (2%)
Query: 241 VAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
A FFE + GY +I N +LN +A ++ I+ + D+VTY+T
Sbjct: 108 AALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTL 167
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
++ + GK+ A LF M KG K I+ LC + +A+ REM ++ C
Sbjct: 168 ISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTC 226
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP-- 416
P+ TYN++I L K R++ L+EM + PN ++N +L K V
Sbjct: 227 PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA--PNVFSYNTVLHGFCKANRVENA 284
Query: 417 -WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
W+LE+M GC +Y ++ D D+ ++M ++G P+ +Y ++ G
Sbjct: 285 LWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDG 344
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G L+ A+ +M +G P T
Sbjct: 345 FCRVGDLDGAVELVRKMTERGYRPNAIT 372
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 35/238 (14%)
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+N L K + A LF++ E D VT + +I +I A E+ EM +G
Sbjct: 132 LLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKG 191
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW 417
+ + S+++ LC + + EM + +C P+ +T+N ++ L K + +
Sbjct: 192 LKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK---TCPPDSVTYNTMINGLSKSDRL-- 246
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+D +R EEM G P+ SY ++HG
Sbjct: 247 -----------------------------DDAIR-LLEEMVDNGFAPNVFSYNTVLHGFC 276
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
R+E+AL +M +G P+ + V + KL + E + + K+ G + N
Sbjct: 277 KANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPN 334
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 194/400 (48%), Gaps = 16/400 (4%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
++T ++N + R D++ AY + + G P + V+N I+ L R +
Sbjct: 33 SITYSTLINGFCKAR-DFQQAYRLLDEMEKRG-IVPHNAVYNTIIKGLCDNGRVDSALVH 90
Query: 179 FDEM-----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
+ +M P ++ TY IL++ + + +A + + E G ++ + L+
Sbjct: 91 YRDMQRHCAPSVI---TYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGF 147
Query: 234 CRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
C+ +++ A F + +N D+ T NI+++G+C + + ++++K CEP+
Sbjct: 148 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNF 207
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
+TY T +++L K GK A L Q M + KP T N +ID C ++ A E+ +
Sbjct: 208 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 267
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
M +RGCLP++ TYN +I C+ R++ + L+ M + C P+ +T+N ++ L K
Sbjct: 268 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTE--AGCPPDVVTYNSIVSGLCKA 325
Query: 413 EEVPWVLERME--RNGCK-MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+V E E RNG + T + ++ D EME+ G PD +Y
Sbjct: 326 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAY 385
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
T++IHG +L+ +L++F EM KG VP T +V D
Sbjct: 386 TILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVID 425
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 116/259 (44%), Gaps = 6/259 (2%)
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N +L+ + EA +K+ + C PDS+TY+T +N K A RL M +
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G P N II LC R+ AL R+M+ R C P+V TY L+ LCK R+
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISD 120
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVI 437
L++M + C PN +T+N L+ L +E + +M N C TYN++
Sbjct: 121 ASLILEDMIE--AGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 178
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ Y + +EM K G P+ +Y ++ L G+ DA + M +
Sbjct: 179 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 238
Query: 498 VPEPRTGILVNDMNIKLKE 516
P T L+ DM K+ +
Sbjct: 239 KPSHFTFNLMIDMFCKVGQ 257
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDII 284
F ++ C+ +++A F+ + DI T NI+++G C + +A++ + +
Sbjct: 245 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 304
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
++ C PD VTY + V+ L K ++ A +++ + G DVVTC+ +ID LC +R+
Sbjct: 305 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 364
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A ++LREM+ G P+V Y LI CK +++ + EM K C+P IT++
Sbjct: 365 DAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK--GCVPTVITYSI 422
Query: 405 LLKSLKKPEEVPWVLERMERNGCKM 429
++ L K V R+GC +
Sbjct: 423 VIDKLCKSARV--------RDGCML 439
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 6/212 (2%)
Query: 151 DYSPGSNVFNAILDV---LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
D P FN ++D+ +G+ EL Q+ + L + TY I+++ A+ +++A
Sbjct: 237 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 296
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+ +R E G D+ + +++ LC+ V+ A +E +N GY D+ T + +++
Sbjct: 297 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNG-GYFLDVVTCSTLID 355
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C + +A++ +++ ++ PD V Y ++ K +L +L F M +KG P
Sbjct: 356 GLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVP 415
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
V+T + +ID LC R+ + +L+ M RG
Sbjct: 416 TVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
CNC++ A KK+ EA ++ + C P+ TY++LI CK + + Y LDEME
Sbjct: 1 CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDC 446
++ +P+ +N ++K L V L M+R+ C S TY +++
Sbjct: 61 KR--GIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSAR 117
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGIL 506
E+M + G P+ +Y +I+G G +++A+ F++M P+ T +
Sbjct: 118 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 177
Query: 507 VNDMNIKLKERGEQGKKVIK 526
+ D K +ER + G K+++
Sbjct: 178 LIDGYCK-QERPQDGAKLLQ 196
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 181/376 (48%), Gaps = 15/376 (3%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWV-SREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
T +L+ +V+ R A FF ++ + +Y ++ F+ +D+ R + +
Sbjct: 53 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHIHPTVWSLI 112
Query: 180 DEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
M L + KT+ I+ RYA++ ++A+ +F E G DL++F +L LC+
Sbjct: 113 HRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKS 172
Query: 237 KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
K VE A F + + F D T N+I+NGWC++ +A K+++ P+ TY
Sbjct: 173 KRVEKAYELFRALRGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYN 232
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
T + + G++ A F M ++ + DVVT ++ I V EM
Sbjct: 233 TMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIRE 292
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL------K 410
G LP+V TYN+ I+ LCK +E +EM +K PN T+N L++ L
Sbjct: 293 GVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYE--PNVTTYNVLIRGLFHAGKFS 350
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+ EE +++RME GC+ + TYN++++ Y +K +E+M P+ +Y
Sbjct: 351 RGEE---LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCLPNLDTYN 407
Query: 471 VMIHGLYDKGRLEDAL 486
++I G++ + R ED +
Sbjct: 408 ILISGMFVRKRSEDMV 423
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 128/254 (50%), Gaps = 8/254 (3%)
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
G KT I+ + G +A + + ++ + C D ++ T ++ L K ++ A
Sbjct: 121 GPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYE 180
Query: 314 LFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
LF+A+ +GR D VT N I++ C KR P+ALEVL+EM +RG PN+TTYN++++
Sbjct: 181 LFRAL--RGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGF 238
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKM 429
+ ++ +E+ EM+++N C + +T+ ++ E+ V + M R G
Sbjct: 239 FRAGQIRQAWEFFLEMKKRN--CEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLP 296
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
S TYN +++ D + +EEM +KG P+ +Y V+I GL+ G+
Sbjct: 297 SVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELM 356
Query: 490 HEMRLKGMVPEPRT 503
M +G P +T
Sbjct: 357 QRMENEGCEPNFQT 370
>gi|224089100|ref|XP_002308636.1| predicted protein [Populus trichocarpa]
gi|222854612|gb|EEE92159.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 212/452 (46%), Gaps = 23/452 (5%)
Query: 96 NILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPG 155
NILK + + AL++ + LI +V + + + ++ F W ++ +
Sbjct: 87 NILKDPKIQLGPSLRTALDRTGIEPELGLIQSVFDHFDSSPKLLHSVFLWAEKKPGFQSS 146
Query: 156 SNVFNAILDVLGRARRFVELIQVF------DEMPDLVNEKTYGILLNRYAAAHMVEEAIG 209
+ +FN++++ LG+AR F + +E DLV+ T+ IL+ RY A M E AI
Sbjct: 147 AALFNSMVNFLGKAREFGSAWCLLLDRIGGNEGGDLVSSDTFAILIRRYTRAGMSEAAIR 206
Query: 210 VFDRRKEFGELDDLSA----FQNLLLWLCRYKHVEVAETFFES--EKNE-FGYDIKTMNI 262
F+ + + A F+ LL LC+ HV VA +F+ EK+ + ++ NI
Sbjct: 207 TFEYASSLDLIHNSEAGTSLFEILLDSLCKEGHVRVATDYFDRKVEKDPCWVPSVRIYNI 266
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+LNGW + A+R W ++ K +P VTY T V ++ ++ A+ L M +G
Sbjct: 267 LLNGWFRSRKLKHAERLWLEMKKKNVKPSVVTYGTLVEGYSRMRRVERAIELVDEMKREG 326
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
K + + N IIDAL R E L ++ P ++TYNSL+K CK +
Sbjct: 327 IKSNAIVYNPIIDALAEAGRFKEVLGMMEHFFLCEEGPTISTYNSLVKGYCKAGDLVGAS 386
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK 439
+ L M + P T+NY + +K EE + +M +G TY+++LK
Sbjct: 387 KILKMMISRE--VFPTPTTYNYFFRHFSKCRKIEEGMNLYTKMIESGYTPDRLTYHLLLK 444
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + D +EM +G D + T+ H L R E+A + F +M +G+VP
Sbjct: 445 MLCEEERLDLAVQISKEMRARGCDMDLATSTMFTHLLCKMQRFEEAFAEFEDMLRRGIVP 504
Query: 500 EPRTGILVNDMNIKLKERG--EQGKKVIKLTS 529
+ T +ND + +++G E +++ KL S
Sbjct: 505 QYLTFHRLND---EFRKQGLTELARRLCKLMS 533
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 153/323 (47%), Gaps = 25/323 (7%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILL 195
F + V ++ + P ++N +L+ R+R+ +++ EM P +V TYG L+
Sbjct: 247 FDRKVEKDPCWVPSVRIYNILLNGWFRSRKLKHAERLWLEMKKKNVKPSVV---TYGTLV 303
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC---RYKHV-EVAETFFESEKN 251
Y+ VE AI + D K G + + ++ L R+K V + E FF E+
Sbjct: 304 EGYSRMRRVERAIELVDEMKREGIKSNAIVYNPIIDALAEAGRFKEVLGMMEHFFLCEE- 362
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G I T N ++ G+C G++ A + K +I + P TY F +K K+
Sbjct: 363 --GPTISTYNSLVKGYCKAGDLVGASKILKMMISREVFPTPTTYNYFFRHFSKCRKIEEG 420
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ L+ M E G PD +T + ++ LC ++R+ A+++ +EM+ RGC ++ T
Sbjct: 421 MNLYTKMIESGYTPDRLTYHLLLKMLCEEERLDLAVQISKEMRARGCDMDLATSTMFTHL 480
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK-MS 430
LCK++R E + ++M ++ +P +TF+ L +K L + R CK MS
Sbjct: 481 LCKMQRFEEAFAEFEDMLRRG--IVPQYLTFHRLNDEFRKQG-----LTELARRLCKLMS 533
Query: 431 TDTYNVILKLYVNWDCEDKVRHT 453
+ +++ L N D D RH
Sbjct: 534 SVSHSKNLPNTYNVD-RDASRHA 555
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 170/363 (46%), Gaps = 16/363 (4%)
Query: 152 YSPGSNV-FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
+ P S V F +L + + + + ++ + +M PD+ T IL+N + +
Sbjct: 107 HPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDV---YTLNILINSFCHLRRL 163
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNII 263
A V + + G D + F L+ LC + A F+ E F D+ T +
Sbjct: 164 GYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTL 223
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+NG C +GN A R + +++ C P+ + Y T +++L K ++ A LF M KG
Sbjct: 224 MNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGI 283
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD+ T N +I ALC +L EM N +PNV +++++ LCK + ++
Sbjct: 284 SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHD 343
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
+D M ++ P+ +T+ L+ + +E V + M GC + +YN+++
Sbjct: 344 VVDMMIKRGVE--PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 401
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
Y DK E+M +G+ D +Y +IHGL GRL+ A++ FHEM G +P+
Sbjct: 402 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 461
Query: 501 PRT 503
T
Sbjct: 462 LVT 464
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 163/359 (45%), Gaps = 27/359 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + FN ++ L + E + +FD+ PD+V TYG L+N A
Sbjct: 180 PDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVV---TYGTLMNGLCKVGNTSAA 236
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNG 266
I + + ++ A+ ++ LC+ + V E F E DI T N +++
Sbjct: 237 IRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHA 296
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C L +++ SK P+ V ++T V+AL K+G + A + M ++G +PD
Sbjct: 297 LCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPD 356
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT ++D C + + EA++V M ++GC+PNV +YN LI C+I+RM+ L+
Sbjct: 357 VVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLE 416
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+M + + + +T+N L+ L + + + M +G TY ++L +
Sbjct: 417 QMSLQ--GLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL----D 470
Query: 444 WDCEDKVRHTWEEM------EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ C++ H E M E + D Y + I G+ G LE A F + +G
Sbjct: 471 YLCKN--HHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 182/375 (48%), Gaps = 18/375 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A FF+ + SP ++ ++D L +A R + +++ + M PD++ T
Sbjct: 96 ETALEFFRKMDDR--CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVI---T 150
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESE 249
Y IL++ V A V + G + +L + +LL LCR + V A +
Sbjct: 151 YTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMT 210
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
++ T +++G C +G V +A D+I PD + Y +N L K ++
Sbjct: 211 CRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVD 270
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
++ L + G KPDVVT + +I LC R+ EA +L +K+RGC P+V Y++LI
Sbjct: 271 ESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLI 330
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
LCK +++ ++ + M C + +T++ L+ L K +E +L RM R G
Sbjct: 331 DGLCKAGKVDEAFDLYEVM--TGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 388
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED-A 485
ST TYN ++K + + D+ EEME+ P +Y ++IHG+ R++ A
Sbjct: 389 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAA 448
Query: 486 LSYFHEMRLKGMVPE 500
L YF EM G++P+
Sbjct: 449 LDYFQEMIDNGVIPD 463
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 174/362 (48%), Gaps = 23/362 (6%)
Query: 148 REGDYSPGSNVFNAILDVL------GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAA 201
R+ P +N+++D L RA+ E ++ + P +V TY LL+
Sbjct: 2 RDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMV---TYNTLLDGLFRT 58
Query: 202 HMVEEAIGVF----DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDI 257
+E A+ +F DRR D+ +F L+ LCR +E A FF + ++
Sbjct: 59 GKLERAMALFQEMLDRRSH-----DVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNV 113
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T +++++G C V +A + + C PD +TY V+ L K+ K+ A + +
Sbjct: 114 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 173
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M + G P++VT N ++ LC +R+ +AL ++R+M RGC PNV TY +LI LCK+ R
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 233
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTY 434
++ L +M K G+ P+ + +N L+ L K ++V +L R G K TY
Sbjct: 234 VKDACAMLADMIDKGGT--PDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTY 291
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+ ++ + D+ ++ +G PD Y+ +I GL G++++A + M
Sbjct: 292 SSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTG 351
Query: 495 KG 496
G
Sbjct: 352 DG 353
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 157/332 (47%), Gaps = 10/332 (3%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP + ++D L + + +V EM D + N TY LL+ A V +A+
Sbjct: 145 SPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALA 204
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWC 268
+ G ++ + L+ LC+ V+ A ++ G D+ N+++NG C
Sbjct: 205 LMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLC 264
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
V E+ + + +PD VTY++ + L + +L A RL + +G PDV+
Sbjct: 265 KADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVI 324
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+ +ID LC ++ EA ++ M GC +V TY++LI LCK R++ + L M
Sbjct: 325 LYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARM 384
Query: 389 EQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ P+ +T+N L+K L +E ++E MER+ C S TYN+++ +
Sbjct: 385 VRMGTP--PSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRME 442
Query: 446 CEDKVRHTW-EEMEKKGMGPDQRSYTVMIHGL 476
D + +EM G+ PD +Y++++ GL
Sbjct: 443 RVDSAALDYFQEMIDNGVIPDHITYSILLEGL 474
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 141/286 (49%), Gaps = 17/286 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + ++D L + R + + +M PDL+ Y +L+N A V+E
Sbjct: 215 TPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLM---IYNMLINGLCKADQVDE 271
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILN 265
+I + R G D+ + +++ LCR + E + D+ + +++
Sbjct: 272 SIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLID 331
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G V EA ++ + C+ D VTY+T ++ L K G++ A L M G P
Sbjct: 332 GLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPP 391
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV-YEY 384
+T N +I LC + EA+E++ EM+ C P+ TYN LI +C+++R+++ +Y
Sbjct: 392 STMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDY 451
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEV----PWVLERMERNG 426
EM NG +P+ IT++ LL+ LKK +++ VL++M + G
Sbjct: 452 FQEM-IDNGV-IPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 495
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 104/235 (44%), Gaps = 49/235 (20%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS---------- 367
M + G +P+VVT N +ID LC A E+ MK+ C P++ TYN+
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 368 ------------------------LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
L+ LC+ ++ET E+ +M+ + C PN IT++
Sbjct: 61 LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR---CSPNVITYS 117
Query: 404 YLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDC-EDKVRHTWE---E 456
L+ L K V +LE M+ GC TY ++ V+ C E KV WE E
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTIL----VDGLCKESKVAAAWEVLRE 173
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
M G P+ +Y ++HGL R+ DAL+ +M +G P T G L++ +
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 228
>gi|296090648|emb|CBI41047.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 159/304 (52%), Gaps = 8/304 (2%)
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
F LL LC+ V+ A + FE + F +K +L GWC G + EAK I +
Sbjct: 88 FGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIRE 147
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+ EPD V Y + GK+ A L + M K +P+V++ +I ALC KK++ E
Sbjct: 148 AGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEE 207
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A+ V EM++ GC + TY +LI CK ++ YE LD M Q+ +PN +T+ ++
Sbjct: 208 AMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGH--IPNPMTYLHI 265
Query: 406 LKSLKKPEEVPWVLERME---RNGCKMSTDTYNVILKLYVNW-DCEDKVRHTWEEMEKKG 461
+ + +K EE+ +E ME + GC + YN++++L + ++ VR W EME G
Sbjct: 266 MAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVR-VWNEMEATG 324
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLK-ERGEQ 520
+ P ++ +MIHG + L +A +F EM +G++ P+ G L +N L+ E+ E
Sbjct: 325 LSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEM 384
Query: 521 GKKV 524
K V
Sbjct: 385 SKDV 388
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 6/226 (2%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
+ ++AL K G + A LF+ M + P + ++ C + ++ EA VL ++
Sbjct: 87 VFGCLLDALCKNGSVKEAASLFEDMRIR-FTPTLKHFTSLLYGWCREGKLMEAKYVLVQI 145
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---K 410
+ G P++ YN+L+ +M Y+ L EM +K C PN ++F L+++L K
Sbjct: 146 REAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRK--ECEPNVMSFTTLIQALCAKK 203
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
K EE V M+ GC TY ++ + W K + M ++G P+ +Y
Sbjct: 204 KMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYL 263
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKE 516
++ K LE+ + EMR G P+ +V + KL E
Sbjct: 264 HIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGE 309
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 180/360 (50%), Gaps = 17/360 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
Y P + FN ++ L + E + + D M PDLV TYG+++N +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV---TYGVVVNGLCKRGDTD 238
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLL-WLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
A + ++ ++ G+L+ N ++ LC+YKH++ A F E E ++ T + +
Sbjct: 239 LAFNLLNKMEQ-GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ C G +A R D+I+ K PD T++ ++A K+GKL A +L+ M ++
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P +VT + +I+ C R+ EA ++ M ++ C P+V TYN+LIK CK KR+E E
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKL 440
EM Q+ + N +T+N L++ L + + + + M +G + TYN +L
Sbjct: 418 VFREMSQR--GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+K +E +++ M P +Y +MI G+ G++ED F + LKG+ P+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 181/411 (44%), Gaps = 23/411 (5%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT 190
R F + +Y + + +SR G + A+ + ++R F +I+
Sbjct: 37 RRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIE------------- 83
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
+ LL+ A + + I + ++ + G + + L+ CR + +A +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL-GKM 142
Query: 251 NEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ GY+ I T++ +LNG+C + EA + + +P++VT+ T ++ L K
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A+ L M KG +PD+VT +++ LC + A +L +M+ P V YN++
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN 425
I LCK K M+ EME K PN +T++ L+ L + + +L M
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETK--GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
T++ ++ +V + ++EM K+ + P +Y+ +I+G RL++A
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 486 LSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK-LTSLGLKGN 535
F M K P+ T + K K R E+G +V + ++ GL GN
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREMSQRGLVGN 430
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 125/263 (47%), Gaps = 12/263 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + VE +++DEM P +V TY L+N + ++E
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV---TYSSLINGFCMHDRLDE 379
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F+ D+ + L+ C+YK VE E F E + + T NI++
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G+ A+ +K+++ P+ +TY T ++ L K GKL A+ +F+ + +P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ T N +I+ +C ++ + ++ + +G P+V YN++I C+ E
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 386 DEMEQKNGSCLPNEITFNYLLKS 408
EM K LPN +N L+++
Sbjct: 560 KEM--KEDGTLPNSGCYNTLIRA 580
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 83/223 (37%), Gaps = 39/223 (17%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++ + +R E ++VF EM + N TY IL+ A + A +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE----------------------- 247
F G ++ + LL LC+ +E A FE
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 248 SEKNEFGYD-------------IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ K E G+D + N +++G+C G+ EA +K++ + P+S
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
Y T + A + G + L + M G D T + + L
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 179/356 (50%), Gaps = 15/356 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P FN +L L + ++ +++FDEM PD++ TY ++N A
Sbjct: 8 PTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVI---TYSTIINGLCKMGNTTMA 64
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNG 266
+ + + +E G ++ A+ ++ LC+ + V A FF E K D+ T + IL+G
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C LG V EA +K +++ P+ VT+ ++ L KK + A +F+ M EKG +PD
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V T N ++D C + ++ EA ++ M +GC PNV +YN LI CK R++ L
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244
Query: 387 EMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM K S P+ T++ L++ + +P+E +L+ M G + TY+++L
Sbjct: 245 EMSHK--SLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCK 302
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ + M++ + P+ YT++I G+ G+LE A F + +KG+ P
Sbjct: 303 HGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQP 358
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 133/245 (54%), Gaps = 5/245 (2%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N +L+G C + +A + + +++K EPD +TY+T +N L K G AL+L + M
Sbjct: 12 TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
EKG KP+VV N IID+LC + + EA++ EM G P+V TY+S++ C + R+
Sbjct: 72 EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRV 131
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PW-VLERMERNGCKMSTDTYN 435
+M ++N +PN++TF L+ L K + W V E M G + TYN
Sbjct: 132 NEATSLFKQMVERN--VIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYN 189
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++ Y + D+ + + M++KG P+ RSY ++I+G GR+++A EM K
Sbjct: 190 ALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHK 249
Query: 496 GMVPE 500
+ P+
Sbjct: 250 SLTPD 254
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 10/282 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE---LIQVFDEMPDLVNEKTYGILL 195
A+ F+ ++ +G P +NA++D + E L + D N ++Y IL+
Sbjct: 169 AWLVFETMTEKG-LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILI 227
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
N + + ++EA G+ D+ + L+ C+ + A+ + E +G
Sbjct: 228 NGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLK-EMCSYGL 286
Query: 256 --DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
++ T +I+L+G C G++ EA K + +SK EP+ Y + + GKL A
Sbjct: 287 LPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARE 346
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
LF ++ KG +P VVT +I L EA E+ REM GCLPN TYN +I+
Sbjct: 347 LFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFL 406
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
+ ++EM K S + TF +L L+ +E+
Sbjct: 407 RNGDTPNAVRLIEEMVGKGFS--ADSSTFR-MLSDLESSDEI 445
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 42/196 (21%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M++ G +P +VT N ++ LC K +I +A+++ EM G P+V TY+++I LCK+
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVI 437
+ +L++ME GCK + YN I
Sbjct: 61 TTMALQ----------------------------------LLKKMEEKGCKPNVVAYNTI 86
Query: 438 LKLYVNWDCEDKV----RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
++ C+D++ + EM K+G+ PD +Y+ ++HG + GR+ +A S F +M
Sbjct: 87 ----IDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMV 142
Query: 494 LKGMVPEPRTGILVND 509
+ ++P T ++ D
Sbjct: 143 ERNVIPNKVTFTILID 158
>gi|125540181|gb|EAY86576.1| hypothetical protein OsI_07956 [Oryza sativa Indica Group]
gi|125582780|gb|EAZ23711.1| hypothetical protein OsJ_07414 [Oryza sativa Japonica Group]
gi|215768726|dbj|BAH00955.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 500
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 192/400 (48%), Gaps = 10/400 (2%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
+ LT +++ ++ ++ DW++A FF+W DY + N ++D+LG+ R+ ++ +
Sbjct: 78 IRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWE 137
Query: 178 VFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+ +M LV +T + R A A ++ + +FD+ ++ G + LL LC+
Sbjct: 138 LLSDMHGRGLVTVETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCK 197
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
+ +EVA F D T NI ++GWC + + EA +++ + P +TY
Sbjct: 198 ERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITY 257
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
T + A K+ + +M +G P+V+T I+ +L +R EAL V MK+
Sbjct: 258 TTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKS 317
Query: 356 RGCLPNVTTYNSLIKHLCKIKRM-ETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KK 411
GC P+ YNSLI L K + E + EM S N T+N ++ +
Sbjct: 318 SGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVS--HNLATYNTMISIFCYYGR 375
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE-DKVRHTWEEM-EKKGMGPDQRSY 469
++ VL+ ME CK +Y +L+L+++ + D VRH E+ K +G D +Y
Sbjct: 376 DDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDTY 435
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
T++IHGL G A F EM + P +T +++ D
Sbjct: 436 TLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLLD 475
>gi|242078797|ref|XP_002444167.1| hypothetical protein SORBIDRAFT_07g011860 [Sorghum bicolor]
gi|241940517|gb|EES13662.1| hypothetical protein SORBIDRAFT_07g011860 [Sorghum bicolor]
Length = 520
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 177/350 (50%), Gaps = 6/350 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVF 211
P ++ ++ + G+ARRF V M + ++ + IL+ RYAAA+ V +A+ F
Sbjct: 134 PPADAWHLAVWAAGKARRFDLAWAVVRRMRNRGVLTGRAMVILMERYAAANEVNKAVKTF 193
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC-VL 270
D ++F D S F +LL LC+ K++E AE K F + NIIL+GWC V+
Sbjct: 194 DVMEKFKVESDQSVFYSLLRALCKSKNIEDAEELLLLRKKFFPLSAEGFNIILDGWCNVI 253
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
++ EAKR W+++ PD ++Y ++ +K G L LR++ M ++G P +
Sbjct: 254 TDLAEAKRVWREMSNHCITPDGMSYTLMISCFSKVGSLFDTLRVYDEMKKRGWIPGIGVY 313
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N ++ L + + +A + ++ + G P+V TYNS+I LC+ +++ ++ M
Sbjct: 314 NSLVYVLTRENCVKDAHNIFSKLTDEGLQPDVETYNSMIVPLCESCKLDEARVVMESMIL 373
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
K +P T++ LK E + +L++M+ +GC +DT+ ++ + +
Sbjct: 374 KG--IVPTISTYHAFLKQEGIDESLK-LLQKMKEDGCGPKSDTFLMLFDKFFLLNESGNA 430
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
W EM K + P + Y ++ GL G + AL Y+ EM+ KG +
Sbjct: 431 LRVWNEMRKYKISPVRSHYMTVVEGLVKHGCIPRALEYYDEMKEKGFASD 480
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 201/454 (44%), Gaps = 15/454 (3%)
Query: 59 LFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAI---NVQNILKTCSVSTKGEIEKALNQ 115
+FL + +A V L S + +F P D + I + I K S + +AL +
Sbjct: 1 MFLFQKASASHVQLLIGSKKYFQFH-LPRDAVNIAEASDATIAKLVLESDPRTLSEALTK 59
Query: 116 CELTLTDDLIVNVINRYRFDWEAAYTFFKWVSRE-GDYSPGSNVFNAILDVLGRARRFVE 174
+ T +L+ + R A FFK + R Y+ + F+ +D+ R R F
Sbjct: 60 PRIHWTPELVNKTLKRLWNHGPKALLFFKHLDRHLPSYTHSPSSFDHAVDIAARMRDFNS 119
Query: 175 LIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
+ M L + KT IL RYA+ A+ F E G DL +F LL
Sbjct: 120 AWALVGRMRSLRLGPSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLD 179
Query: 232 WLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LC+ VE A + K+ F D + NI+ NG+C+ A R K++++ EP
Sbjct: 180 ILCKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPT 239
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
VTY T + + ++ A + M ++ + DVV+ +I + +A V
Sbjct: 240 MVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFD 299
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-- 409
EM G PNV TYN+LI+ CK ++ +EM + G C PN +TFN +++ L
Sbjct: 300 EMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEM-VREGVCSPNVVTFNVVIRGLCH 358
Query: 410 -KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
E +ERM +G + S TYNV+++ + + +K + +M P+ +
Sbjct: 359 VGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDT 418
Query: 469 YTVMIHGLYDKGRLED---ALSYFHEMRLKGMVP 499
Y V+I ++ + + ED A EM +G +P
Sbjct: 419 YNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLP 452
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 103/227 (45%), Gaps = 8/227 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P +N +L R+ + E + + EM ++ +Y +++ + A V++A V
Sbjct: 238 PTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRV 297
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE--FGYDIKTMNIILNGWC 268
FD + G +++ + L+ C+ V+ A FE E ++ T N+++ G C
Sbjct: 298 FDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLC 357
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+G++ A F + + + TY + G++ L +F M + P++
Sbjct: 358 HVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLD 417
Query: 329 TCNCIIDALCFKKRIPE---ALEVLREMKNRGCLPNVTTYNSLIKHL 372
T N +I A+ +K+ + A ++L EM RG LP T+N ++ L
Sbjct: 418 TYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGL 464
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 11/207 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+ ++ G A + +VFDEM N TY L+ + V+ A+ VF+
Sbjct: 278 YTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMV 337
Query: 216 EFGELD-DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGN 272
G ++ F ++ LC +E A F E E G ++T N+++ +C G
Sbjct: 338 REGVCSPNVVTFNVVIRGLCHVGDMERALGFME-RMGEHGLRASVQTYNVVIRYFCDAGE 396
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK---LGTALRLFQAMWEKGRKPDVVT 329
+ + + + C P+ TY ++A+ + K L A +L M E+G P T
Sbjct: 397 IEKGLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFT 456
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNR 356
N +++ L A ++LR M++R
Sbjct: 457 FNRVLNGLVITGNQDFAKDILR-MQSR 482
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 180/365 (49%), Gaps = 27/365 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + + +L L + R+ E+ ++F EM PD E T+ ++ +V+ A
Sbjct: 265 PDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPD---EVTFNTIVTSLCQQGLVDRA 321
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILN 265
I V D E G + D+ + ++L LC V+ A K+ +G T+ +L
Sbjct: 322 IKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKS-YGCKPDTIAYTTVLK 380
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C + A+ +++ S C PD VT+ T + +L +KG + A+++ + M E G P
Sbjct: 381 GLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNP 440
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+VT N IID LC ++ I +A+E+L +++ GC P++ T+N+L+K LC + R E + +
Sbjct: 441 DIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLM 500
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER---MERNGCKMSTDTYNVILKLYV 442
M + C P+ TFN ++ SL + + +E M NGC + TYN+++ +
Sbjct: 501 VNMMHSD--CPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALL 558
Query: 443 NWDCEDKVRHTWEEME-KKGM---GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
K T E ++ GM PD +Y +I + G++E+AL M G+
Sbjct: 559 ------KAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLS 612
Query: 499 PEPRT 503
P+ T
Sbjct: 613 PDTIT 617
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 170/363 (46%), Gaps = 17/363 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P + FN ++ L R + + VFD+M P +V TY ILL+ A
Sbjct: 158 FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVV---TYSILLDATCKASGYR 214
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNII 263
+A+ + D + G D+ + L+ +C V+ A S+ G D T +
Sbjct: 215 QAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNIL-SDLPSHGCKPDAVTYTPV 273
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L C E + + ++ +KC PD VT+ T V +L ++G + A+++ M E G
Sbjct: 274 LKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGC 333
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD+VT + I+D LC R+ +A+E+L +K+ GC P+ Y +++K LC I++ E E
Sbjct: 334 IPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEE 393
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
+ EM + C P+E+TFN ++ SL + + V+E+M NGC TYN I+
Sbjct: 394 LMAEMVCSD--CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDG 451
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
N C D ++ G PD ++ ++ GL R EDA M P+
Sbjct: 452 LCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPD 511
Query: 501 PRT 503
T
Sbjct: 512 ATT 514
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 154/357 (43%), Gaps = 27/357 (7%)
Query: 167 GRARRFVELIQ--VFDEMPDLVNEKTYG---------------ILLNRYAAAHMVEEAIG 209
G RR LIQ D+ LV+ G IL+ R + V +A
Sbjct: 60 GPKRRLRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAER 119
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCV 269
VF G + + ++ CR +E A F D T N ++ CV
Sbjct: 120 VF---ATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMP--FPPDTFTFNPLIRALCV 174
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G V +A + D++ C P VTY+ ++A K A+ L M KG +PD+VT
Sbjct: 175 RGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVT 234
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I+A+C + + EAL +L ++ + GC P+ TY ++K LC +R + V E EM
Sbjct: 235 YNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEM- 293
Query: 390 QKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ C P+E+TFN ++ SL + + V++ M +GC TY+ IL +
Sbjct: 294 -ASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGR 352
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D ++ G PD +YT ++ GL + E A EM P+ T
Sbjct: 353 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVT 409
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 45/299 (15%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
D P FN ++ L + I+V ++M PD+V TY +++ +
Sbjct: 402 DCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIV---TYNSIIDGLCNERCI 458
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNII 263
++A+ + + +G D+ F LL LC E AE + ++ D T N +
Sbjct: 459 DDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTV 518
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKC---------------------------------EP 290
+ C G + +A K + ++ C P
Sbjct: 519 ITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTP 578
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D +TY T ++ +TK GK+ AL L + M G PD +T + +C + A+ +L
Sbjct: 579 DLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRML 638
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+++ G P+ T YN ++ C+ R + + M + C+P+E T+ LL++L
Sbjct: 639 CRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHM--VSSGCMPDESTYIILLEAL 695
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 82/213 (38%), Gaps = 6/213 (2%)
Query: 151 DYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
D P + FN ++ L G + +E +++ E + N+ TY I+++ A +EA
Sbjct: 507 DCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEA 566
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNG 266
+ + DL + ++ + + +E A N D T + G
Sbjct: 567 LKLLSGMTNGTP--DLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYG 624
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C A R + PD+ Y + + + A+ F M G PD
Sbjct: 625 ICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPD 684
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
T +++AL ++ + EA ++L + + G L
Sbjct: 685 ESTYIILLEALAYECLLDEAKQLLVNLCSLGVL 717
>gi|47848296|dbj|BAD22160.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 454
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 192/400 (48%), Gaps = 10/400 (2%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
+ LT +++ ++ ++ DW++A FF+W DY + N ++D+LG+ R+ ++ +
Sbjct: 32 IRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWE 91
Query: 178 VFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+ +M LV +T + R A A ++ + +FD+ ++ G + LL LC+
Sbjct: 92 LLSDMHGRGLVTVETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCK 151
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
+ +EVA F D T NI ++GWC + + EA +++ + P +TY
Sbjct: 152 ERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITY 211
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
T + A K+ + +M +G P+V+T I+ +L +R EAL V MK+
Sbjct: 212 TTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKS 271
Query: 356 RGCLPNVTTYNSLIKHLCKIKRM-ETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KK 411
GC P+ YNSLI L K + E + EM S N T+N ++ +
Sbjct: 272 SGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVS--HNLATYNTMISIFCYYGR 329
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE-DKVRHTWEEM-EKKGMGPDQRSY 469
++ VL+ ME CK +Y +L+L+++ + D VRH E+ K +G D +Y
Sbjct: 330 DDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDTY 389
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
T++IHGL G A F EM + P +T +++ D
Sbjct: 390 TLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLLD 429
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 175/358 (48%), Gaps = 20/358 (5%)
Query: 159 FNAILDVLGR-----ARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGV 210
+N +L L R A F L++V P L N +Y L+ A +A+G+
Sbjct: 59 YNTVLAALCRQGCLDAALF--LLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGL 116
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCV 269
++ G D+ + L+ LC V+ A E E ++ ++ + +L+G+C
Sbjct: 117 LRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCK 176
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + ++++ EPD V Y +++L + GK+ A R+ M E+G +P+VVT
Sbjct: 177 TGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVT 236
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I+++C + + EAL++ + M +G P+V TYN+LI L + M+ L+EM
Sbjct: 237 YNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMM 296
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPW------VLERMERNGCKMSTDTYNVILKLYVN 443
Q P+ +TFN ++ L K + W V M NGC+ + +N+++ +
Sbjct: 297 QGETRVRPDLMTFNSVIHGLCK---IGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLR 353
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
K +EM G+ PD +Y+++I+G ++E A SY EMR +GM PEP
Sbjct: 354 VHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEP 411
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 158/379 (41%), Gaps = 19/379 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
WE+ F+ +S G P ++ A++D L R + + +V D M P++V
Sbjct: 180 WESVGKVFEEMSGRG-IEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVV--- 235
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-- 247
TY +L+N V EA+ + E G D+ + L+ L ++ A E
Sbjct: 236 TYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEM 295
Query: 248 -SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ D+ T N +++G C +G + +A + + ++ C + V + + L +
Sbjct: 296 MQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVH 355
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
K+ A+ L M G +PD T + +I+ C +++ A L EM+++G P Y
Sbjct: 356 KVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYI 415
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLERME 423
L+K +C M + +EM++ +C + ++ ++ K E L+ M
Sbjct: 416 PLLKAMCDQGMMGQARDLFNEMDR---NCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMI 472
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G TY++ + ++ ++M G PD + +I G KG E
Sbjct: 473 DEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTE 532
Query: 484 DALSYFHEMRLKGMVPEPR 502
L EM K + +P+
Sbjct: 533 KILELTREMTAKDVALDPK 551
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 139/315 (44%), Gaps = 18/315 (5%)
Query: 102 SVSTKGEIEKALN----------QCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGD 151
S+ +G + +AL+ Q ++ + LI + + D EA + + E
Sbjct: 243 SMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMD-EAMALLEEMMQGETR 301
Query: 152 YSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAI 208
P FN+++ L G R+ +++ + E N + +L+ H V++A+
Sbjct: 302 VRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAM 361
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNII--LNG 266
+ D G D + L+ C+ + VE AE++ SE G + + ++ I L
Sbjct: 362 ELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYL-SEMRHQGMEPEPVHYIPLLKA 420
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G + +A+ + ++ ++ C+ D+ Y+T ++ K G+ A + M ++G PD
Sbjct: 421 MCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPD 479
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VT + I+ + A VL++M G +P+V ++SLI+ E + E
Sbjct: 480 AVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTR 539
Query: 387 EMEQKNGSCLPNEIT 401
EM K+ + P I+
Sbjct: 540 EMTAKDVALDPKIIS 554
>gi|297599556|ref|NP_001047351.2| Os02g0601600 [Oryza sativa Japonica Group]
gi|255671066|dbj|BAF09265.2| Os02g0601600 [Oryza sativa Japonica Group]
Length = 466
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 192/400 (48%), Gaps = 10/400 (2%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
+ LT +++ ++ ++ DW++A FF+W DY + N ++D+LG+ R+ ++ +
Sbjct: 44 IRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWE 103
Query: 178 VFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+ +M LV +T + R A A ++ + +FD+ ++ G + LL LC+
Sbjct: 104 LLSDMHGRGLVTVETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCK 163
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
+ +EVA F D T NI ++GWC + + EA +++ + P +TY
Sbjct: 164 ERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITY 223
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
T + A K+ + +M +G P+V+T I+ +L +R EAL V MK+
Sbjct: 224 TTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKS 283
Query: 356 RGCLPNVTTYNSLIKHLCKIKRM-ETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KK 411
GC P+ YNSLI L K + E + EM S N T+N ++ +
Sbjct: 284 SGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVS--HNLATYNTMISIFCYYGR 341
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE-DKVRHTWEEM-EKKGMGPDQRSY 469
++ VL+ ME CK +Y +L+L+++ + D VRH E+ K +G D +Y
Sbjct: 342 DDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDTY 401
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
T++IHGL G A F EM + P +T +++ D
Sbjct: 402 TLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLLD 441
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 185/379 (48%), Gaps = 24/379 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKTYGILLNRYAAAHMVEEA 207
P +N I+D ++ E ++ + +PD V TY L+N A +E A
Sbjct: 313 PDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRV---TYCSLINGLCAEGDIERA 369
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNG 266
+ +F+ + DL + +L+ LCR + A E + DI T NII+NG
Sbjct: 370 LELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIING 429
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +GN+ +A D I PD T+ T ++ K+ KL +AL+L + MW G PD
Sbjct: 430 LCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPD 489
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V+T N +++ LC + E E EM +GC PN TYN LI++ CKI ++E +
Sbjct: 490 VITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIV 549
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLY-- 441
M Q +P+ ++FN L+ + ++ + ++++ G + DT+N+++ Y
Sbjct: 550 RMCQD--GLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSS 607
Query: 442 -VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+N +K+ + EM KG PD +Y +++ GL ++ A ++ EM KG VP
Sbjct: 608 KLNMQMAEKI---FGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPS 664
Query: 501 PRT-GILVN--DMNIKLKE 516
T G ++N MN ++ E
Sbjct: 665 MATFGRMLNLLAMNHRVSE 683
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 141/322 (43%), Gaps = 8/322 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK-HVEV 241
PD + + Y + YA A + A+ F+R F A+ ++ L H +
Sbjct: 67 PDSL-QPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQA 125
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ + D +T + L +C+ G + A R + + + C+ Y T V
Sbjct: 126 HKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRG 185
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L G A LF M + PDV T N ++ ALC K + E+ +L ++ RG N
Sbjct: 186 LYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSAN 245
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
T N I+ LC+ R+E E + +E+ P+ +T+N L++ L K +E
Sbjct: 246 KFTCNIWIRGLCEDGRLE---EAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQY 302
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L RM GC TYN I+ Y + ++ KG PD+ +Y +I+GL
Sbjct: 303 LGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCA 362
Query: 479 KGRLEDALSYFHEMRLKGMVPE 500
+G +E AL F+E + K + P+
Sbjct: 363 EGDIERALELFNEAQAKDLKPD 384
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 5/307 (1%)
Query: 233 LCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
LC +E A E D+ T N ++ G C V EA ++ ++ C PD
Sbjct: 256 LCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDD 315
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
TY T ++ K G L A L + KG PD VT +I+ LC + I ALE+ E
Sbjct: 316 FTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNE 375
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
+ + P++ YNSL+K LC+ + + ++EM ++ C P+ T+N ++ L K
Sbjct: 376 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEE--GCHPDIWTYNIIINGLCKM 433
Query: 413 ---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+ V+ G T+N ++ Y D E M G+ PD +Y
Sbjct: 434 GNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITY 493
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTS 529
+++GL G+ ++ F EM LKG P T ++ + K+ + E ++++
Sbjct: 494 NSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQ 553
Query: 530 LGLKGNA 536
GL +A
Sbjct: 554 DGLVPDA 560
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 147/382 (38%), Gaps = 45/382 (11%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D E A F ++ D P V+N+++ L R + +QV +EM PD+
Sbjct: 365 DIERALELFNE-AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDI--- 420
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY I++N + +A V + G L D+ F L+ C+ ++ A E
Sbjct: 421 WTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVER 480
Query: 249 E-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
D+ T N +LNG C G E ++++I C P+++TY + K +
Sbjct: 481 MWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 540
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L A + M + G PD V+ N +I C + A + +++ +G T+N
Sbjct: 541 LEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 600
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC 427
LI M+ + EM K P+ T+ L+ L K V
Sbjct: 601 LIGAYSSKLNMQMAEKIFGEMISKGYK--PDLYTYRILVDGLCKAANV------------ 646
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
D+ EM KG P ++ M++ L R+ +A++
Sbjct: 647 --------------------DRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVA 686
Query: 488 YFHEMRLKGMVPEPRTGILVND 509
H M G+VPE IL D
Sbjct: 687 IIHIMVRMGVVPEVVDTILSTD 708
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 35/84 (41%)
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
ERM+ C + YN I+ VN D+ + M G+ PD R++TV +
Sbjct: 93 AFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFC 152
Query: 478 DKGRLEDALSYFHEMRLKGMVPEP 501
GR AL + +G +P
Sbjct: 153 LTGRPHVALRLLRSLSERGCDAKP 176
>gi|357436823|ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477735|gb|AES58938.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 587
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/528 (25%), Positives = 239/528 (45%), Gaps = 47/528 (8%)
Query: 22 FHSQLTTQFSKLQSCNSVTSHKTLIPIINLQARNSEFLFLGRIETAQLVHSLANSDEKSE 81
F S L+ + L + S+ S T IP +N + + E++Q S
Sbjct: 26 FSSWLSQPGNPLINWPSLPSKPTPIPTLNPNPNS-------KPESSQPTFS--------- 69
Query: 82 FQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYT 141
P D I+ + S+S + L Q + T L+ V + + + ++
Sbjct: 70 ----PNDFTLIST--LFTNPSISPGSSLLTNLTQTGIKPTPPLLHAVFDHFASSPKLLHS 123
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF--------DEMPDLVNEKTYGI 193
+ W + + P S++F+++++ L + + F + + D+ LV+ T+ I
Sbjct: 124 LYLWALNQPGFKPDSSLFDSVINALAKMKEFDDAWSLVLDRIRRDDDDDEKLVSVGTFAI 183
Query: 194 LLNRYAAAHMVEEAIGVF----DRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFES 248
++ RYA A M + AI F D++ + ++S F+ L+ LC+ E +E
Sbjct: 184 IIRRYARAGMHKAAIRTFEFAKDKKSIVDSVSEMSLFEILIDSLCKEGSAREASEYLLRR 243
Query: 249 EKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
++ + G+ I+ NI+LNGW + A+R W+++ P VTY T V +
Sbjct: 244 KETDLGWVPSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMR 303
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
++ AL + M ++G KP+ + N IIDAL R EAL ++ P ++TYN
Sbjct: 304 RVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYN 363
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERME 423
SL+K CK +E + L +M + LP T+NY + K +E + +M
Sbjct: 364 SLVKGFCKAGDIEGASKILKKMISRG--FLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMI 421
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+G TY+++LK+ + + EM KG D + T++ H L +LE
Sbjct: 422 ESGHNPDRLTYHLVLKMLCEEEKLELAVQVSMEMRHKGYDMDLATSTMLTHLLCKMHKLE 481
Query: 484 DALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG--EQGKKVIKLTS 529
+A + F +M +G++P+ T +N++LK++G E +K+ L S
Sbjct: 482 EAFAEFEDMIRRGIIPQYLT---FQKLNVELKKQGMNEMARKLCHLMS 526
>gi|356547476|ref|XP_003542138.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Glycine max]
Length = 504
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 195/407 (47%), Gaps = 13/407 (3%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM 182
DLI + I R +W+ A FKW D V N ++ VL +F + +M
Sbjct: 91 DLICSAIWALREEWKPALLAFKWNCHGND----EKVCNLMIWVLTTHGKFSTAWCIIRDM 146
Query: 183 --PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
L + I+++RYA+A+ +AI F+ +F D AF LL L +Y +VE
Sbjct: 147 HRSSLSTRQAMLIMIDRYASANNSAKAIQTFNFMDKFRLTPDQEAFHALLTALSKYGNVE 206
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
AE F K F + ++ NIILNGWC + +VYEAKR W+++ K P++ +Y+ +
Sbjct: 207 EAEEFMLVNKKLFPLNTESFNIILNGWCNITKDVYEAKRVWREMSKYCITPNATSYSYMI 266
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ + +G L +LRL+ M ++G P + N ++ L + + EAL + ++K +G
Sbjct: 267 SCFSNEGNLFDSLRLYDQMKKRGWIPGIEIYNSLVYVLTHENCLKEALRTIDKLKEQGLQ 326
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
P T+NS+I LC+ ++ + M ++N S P T++ + + + L
Sbjct: 327 PGSATFNSMILPLCEAGKLAGARIIFNTMVEENVS--PTTETYHAFFEGTDYQGTLEF-L 383
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
RM+ +G + D++ +IL ++ W EM+ + P Y +M+ GL
Sbjct: 384 TRMKDSGLGPNKDSFVIILAKFLKLKQPVNALKFWTEMKTYDVLPSCVHYRIMVEGLVTC 443
Query: 480 GRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK 526
A ++ EM G +P+ L ++ + G++GK+ +K
Sbjct: 444 RWFVKARDFYEEMVSNGCSADPKLNRLFQK---EVLDSGDKGKQNVK 487
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 209/432 (48%), Gaps = 15/432 (3%)
Query: 94 VQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS 153
V+ ILK ++ + KAL++ + T+DL+ ++ R+ W A F W + Y
Sbjct: 38 VKGILKR-HFPSEDAVVKALDESGINATNDLVSQLLERFSNQWITALGVFIWAKNQTGYV 96
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
+++ ++D+LG+ ++F + +V +EM +L V+ T I++ R A++ M ++ I V
Sbjct: 97 HTPRLYDLVVDILGKCKKFGIMWKVVNEMNELNGQVSFSTMSIVVRRLASSGMYKDVIDV 156
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
+++ D A ++ L + + A + F K+ D + NI+++G+C
Sbjct: 157 LRGLEKYRVKKDTVALNMVMHALAKQGGAKDAYSVFLEFKDSITLDSHSFNILIHGYCEA 216
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
+ +A++ +++ K PD+ +Y F+ A K+ + M EKG +PDV+
Sbjct: 217 RMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDFRNVEVILNEMGEKGCEPDVIAY 276
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+ I AL ++I EALEV +M C P+ +++LI L + R+ + ++ME
Sbjct: 277 SIYIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTLIYVLGRSGRLNDAWYVFEDME- 335
Query: 391 KNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
N + T+N ++ ++ +LERME N CK +TY +LK+
Sbjct: 336 -NHGVSRDLWTYNAMIYHACANRQGNSALKLLERMEVNSCKPDLETYQPLLKMCCKMKDM 394
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
++ M + D +Y ++I L + G+LE A +F + L G+VP+ RT
Sbjct: 395 KVLKFLLSHMFNNNVRIDLSTYALLIRELAESGKLEHACFFFQDAVLNGIVPKDRT---- 450
Query: 508 NDMNIKLKERGE 519
I LKE G+
Sbjct: 451 --YEILLKELGQ 460
>gi|357454671|ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
gi|124360397|gb|ABN08410.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355486664|gb|AES67867.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
Length = 527
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 182/403 (45%), Gaps = 16/403 (3%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
K IE+AL+ + + D+I V+N EA FF W ++ ++ I+
Sbjct: 86 KAAIEQALSNVCIDVNVDIIGKVLNFGNLGGEAMVMFFNWALKQPMVPRDVGSYHVIVKA 145
Query: 166 LGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGE 219
LGR + FV ++QV DEM DL+ I+++ + A V +AI +F + G
Sbjct: 146 LGRRKFFVFMMQVLDEMRLNGIKADLL---MLSIVIDSFVNAGHVSKAIQLFGNLDDLGL 202
Query: 220 LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
D LL LCR HV A + F S K + +++ T N+++ GW LG V E ++
Sbjct: 203 CRDTEVLNVLLSCLCRRCHVGAAASVFNSMKGKVSFNVDTYNVVVGGWSKLGRVNEIEKV 262
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K++ PD T A F+ L + G++ A+ +F +M EK D N +I
Sbjct: 263 MKEMEVEGFSPDFNTLAFFLEGLGRAGRMDEAVEVFGSMKEK----DTAIYNAMIFNFIS 318
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
++ M + C PN+ TY+ +I + +++ DEM + G P
Sbjct: 319 IGDFDGFMKYYNGMLSDNCEPNIHTYSRMITAFLRTRKVADALLMFDEM-LRQGVVPPTG 377
Query: 400 ITFNYL--LKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
+++ L S P + ++ + CK+S + Y ++L + + W+EM
Sbjct: 378 TITSFIKQLCSYGPPYAAMMIYKKTRKLECKISMEAYKILLMRLSKFGKCGSLLSVWQEM 437
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++ G D Y +I GLY+ G+LE+A+ E KG P
Sbjct: 438 QECGYSSDVEVYEYIISGLYNIGQLENAVLVMEEALRKGFCPS 480
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 12/222 (5%)
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
IK+ S+ +FVNA G + A++LF + + G D N ++ LC + +
Sbjct: 167 IKADLLMLSIVIDSFVNA----GHVSKAIQLFGNLDDLGLCRDTEVLNVLLSCLCRRCHV 222
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
A V MK + NV TYN ++ K+ R+ + + + EME + S P+ T
Sbjct: 223 GAAASVFNSMKGKVSF-NVDTYNVVVGGWSKLGRVNEIEKVMKEMEVEGFS--PDFNTLA 279
Query: 404 YLLKSLKKPEEVPWVLERMERNGCKMSTDT--YNVILKLYVNWDCEDKVRHTWEEMEKKG 461
+ L+ L + + E +E G DT YN ++ +++ D + M
Sbjct: 280 FFLEGLGRAGRMD---EAVEVFGSMKEKDTAIYNAMIFNFISIGDFDGFMKYYNGMLSDN 336
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
P+ +Y+ MI ++ DAL F EM +G+VP T
Sbjct: 337 CEPNIHTYSRMITAFLRTRKVADALLMFDEMLRQGVVPPTGT 378
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 166/323 (51%), Gaps = 14/323 (4%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+ T+ L+N + + +EEA+ + ++ E G D+ + ++ LC+ HV+ A
Sbjct: 139 PDIF---TFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNA 195
Query: 243 ETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ F +N +G D+ ++NG C G +A + ++K K +PD +T+ ++
Sbjct: 196 LSLFNQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALID 254
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A K+GKL A L+ M + P++ T +I+ LC + R+ EA ++ M+ +GC P
Sbjct: 255 AFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFP 314
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPW 417
+V Y SLI CK K++E + EM QK + N IT+ L++ + KP
Sbjct: 315 DVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLT--GNTITYTTLIQGFGLVGKPNVAQE 372
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK---GMGPDQRSYTVMIH 474
V M G + TYNV+L +K +E+M+K+ G+ P+ R+Y V++H
Sbjct: 373 VFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLH 432
Query: 475 GLYDKGRLEDALSYFHEMRLKGM 497
GL G+LE AL F +M+ + M
Sbjct: 433 GLCYNGKLEKALMVFGDMQKRDM 455
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 158/372 (42%), Gaps = 19/372 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILL 195
W A+ ++ + R G +S FN LD+ L + D + LL
Sbjct: 32 WVRAFCNYREILRNGLHSLQ---FNEALDLFSHMVESRPLPSIID----------FTRLL 78
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFG 254
N A + I + + G +DL L+ C+ +A +F + K F
Sbjct: 79 NVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFE 138
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
DI T ++NG+C+ + EA +++ +PD V Y T +++L K G + AL L
Sbjct: 139 PDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSL 198
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M G +PDVV +++ LC R +A +LR M R P+V T+N+LI K
Sbjct: 199 FNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVK 258
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMST 431
++ E +EM Q S PN T+ L+ L + +E + ME GC
Sbjct: 259 EGKLLDAKELYNEMIQM--SIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDV 316
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
Y ++ + + + EM +KG+ + +YT +I G G+ A F
Sbjct: 317 VAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGH 376
Query: 492 MRLKGMVPEPRT 503
M +G+ P RT
Sbjct: 377 MVSRGVPPNIRT 388
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 147/325 (45%), Gaps = 22/325 (6%)
Query: 102 SVSTKGEIEKAL---NQCE-------LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGD 151
S+ G ++ AL NQ E + + L+ + N R W A + + +
Sbjct: 185 SLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGR--WRDADLLLRGMMKR-K 241
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAI 208
P FNA++D + + ++ ++++EM + N TY L+N ++EA
Sbjct: 242 IKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEAR 301
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGW 267
+F + G D+ A+ +L+ C+ K VE A + F+E + + T ++ G+
Sbjct: 302 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGF 361
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK---GRK 324
++G A+ + ++ P+ TY ++ L GK+ AL +F+ M ++ G
Sbjct: 362 GLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVP 421
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P++ T N ++ LC+ ++ +AL V +M+ R + TY +I+ +CK +++
Sbjct: 422 PNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNL 481
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL 409
+ K PN +T+ ++ L
Sbjct: 482 FCSLPSKGVK--PNVVTYTTMISGL 504
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 8/228 (3%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+ A F + +G + P + ++++ + ++ + +++F EM N TY
Sbjct: 298 DEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTT 356
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES----E 249
L+ + A VF G ++ + LL LC V A FE E
Sbjct: 357 LIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKRE 416
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ +I+T N++L+G C G + +A + D+ K + +TY + + K GK+
Sbjct: 417 IDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVK 476
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
AL LF ++ KG KP+VVT +I L + + EA + R+MK G
Sbjct: 477 DALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 186/378 (49%), Gaps = 22/378 (5%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGR------ARRFVELIQVFDEMPDLVNEKTYG 192
A+ FF W+ +G +S + +L++LGR AR F+ I+ + ++ +
Sbjct: 101 AFLFFNWIHEKG-FSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFN 159
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
L+ Y A + +E++ +F+ K G + F ++LL L + +A+ ++
Sbjct: 160 SLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKT 219
Query: 253 FGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+G D T NI++ G+C V E F+K++ C+PD VTY T V+ L + GK+
Sbjct: 220 YGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKV 279
Query: 311 ALRLFQAMWEKGR--KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A L M +K + PDVVT +I C K+ + EAL++L EM RG PN+ TYN+L
Sbjct: 280 AHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTL 339
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERN 425
IK LC+ ++ + + E L++M+ GS +P+ TFN L+ S +E V E M++
Sbjct: 340 IKGLCEAQKWDKMKEILEQMKGDGGS-IPDACTFNTLINSHCCAGNLDEAFKVFENMKKL 398
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK-------GMGPDQRSYTVMIHGLYD 478
+ +Y+V+++ K ++E+ +K G P SY M L +
Sbjct: 399 EVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCE 458
Query: 479 KGRLEDALSYFHEMRLKG 496
G+ + A ++ +G
Sbjct: 459 NGKTKKAERVLRQLMKRG 476
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 33/206 (16%)
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM- 353
+ + + + + G +++LF+ M G P VVT N ++ L + R A EV EM
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
K G P+ TYN LI+ CK ++ + + EM + C P+ +T+N L+ L +
Sbjct: 218 KTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFD--CDPDVVTYNTLVDGLCRAG 275
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
++ K++ + N + K C+D + PD +YT +I
Sbjct: 276 KI------------KVAHNLVNGMSK-----KCKD-------------LSPDVVTYTTLI 305
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVP 499
G K +++AL EM +G+ P
Sbjct: 306 RGYCRKQEVDEALDILEEMNGRGLKP 331
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 100/231 (43%), Gaps = 13/231 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMP----DLVNEKTYGILLNRYAAAHMVEEAIG 209
P +N ++ L A+++ ++ ++ ++M + + T+ L+N + A ++EA
Sbjct: 331 PNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFK 390
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCR---YKHVEVA-ETFFESEKNEFGYDIKTM----N 261
VF+ K+ D +++ L+ LC+ Y E+ + FE E Y K +
Sbjct: 391 VFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYK 450
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+ C G +A+R + ++K + D ++Y + K+G L M +
Sbjct: 451 CMFQYLCENGKTKKAERVLRQLMKRGTQ-DPLSYQIVILGHCKEGSYENGYGLLVWMLRR 509
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
PD+ + +ID K + A E L +M P +T++S++ L
Sbjct: 510 DFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRL 560
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 64/360 (17%), Positives = 133/360 (36%), Gaps = 12/360 (3%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYG 192
W+ + + +G P + FN +++ A E +VF+ M L + +Y
Sbjct: 349 WDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYS 408
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKE-------FGELDDLSAFQNLLLWLCRYKHVEVAETF 245
+L+ +A +FD E +G ++++ + +LC + AE
Sbjct: 409 VLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERV 468
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
D + I++ G C G+ +++ PD Y ++ +K
Sbjct: 469 LRQLMKRGTQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRK 528
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
K A + M + KP T + I++ L + + E+ V+ M R N+
Sbjct: 529 DKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIRQNINFS 588
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERN 425
++ L + ++ + E+ KNG C+ + +L + E +L ++ N
Sbjct: 589 TKCLQLLFDRGLQDKAFK-ITELIYKNGFCVKMDEVVQFLCNKRRALEACKLLLFSLKNN 647
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
+ N+++ + + E+ KG+ D ++ L GR E+A
Sbjct: 648 E-NIDIGLCNIVILDLCKLNKASEAFSLCYELVDKGLHQDLICLNDLVAALEAGGRTEEA 706
>gi|356557763|ref|XP_003547180.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g14820, mitochondrial-like [Glycine max]
Length = 492
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 187/390 (47%), Gaps = 49/390 (12%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E L++C + L+ DL+V+++ R++ A+ FF W + + S +N ++ VLGR
Sbjct: 83 MEAVLDECGVRLSHDLVVDMLQRFKH-AXPAFRFFCWAGKRPGFDHDSRTYNCMMCVLGR 141
Query: 169 ARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
R+F ++ + +EM + L+ +T+ + + +A A+ ++A G+FD K++
Sbjct: 142 TRQFETMVAMLEEMGEMGLLTMETFSVAIKTFAEANQRKKAAGIFDLMKKY--------- 192
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCV--LGNVYEA---KRFWK 281
EF + +N +L+ LG +A KR W
Sbjct: 193 -------------------------EFKVGVDVINFLLDSLSAAKLGKEAQAVFEKRVWN 227
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
++I +PD V + + L K K A +LF+ M K P+V + +I C +K
Sbjct: 228 EMIDRGFKPDIVAHNVMLEGLLK-CKKSDAXKLFEIMKAKCPSPNVRSYTIMIQDFCKQK 286
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ E +E + EM +R C P+ Y LI K+M+ VY L EM ++ C P+ T
Sbjct: 287 MMGEVVEYIDEMVDRECQPDAALYTCLITGFGXKKKMDMVYNLLKEMRKRG--CSPDGGT 344
Query: 402 FNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
+N L+K S + P++ + ++M ++G K + TYN+I++ Y + W+ M
Sbjct: 345 YNALIKLXTSQQMPDDAVRIYKKMSQSGIKPTIHTYNMIMRSYFVTKNYEIGHAIWDXMH 404
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+KG PD SY+V I G+ +KG L Y
Sbjct: 405 QKGCCPDDNSYSVYI-GMLEKGMKAPQLDY 433
>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 199/408 (48%), Gaps = 15/408 (3%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWE---AAYTFFKWVSREGDYSPGSNV 158
S S+ ++++L + L++DLI V+ R RF A FF + ++ +
Sbjct: 69 SASSTRNLKQSLKSSGVFLSNDLIDKVLKRVRFSHGNPFQALAFFNYTNKRKGFYHTPFS 128
Query: 159 FNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
+ +L +LGR+RRF ++ ++ +M L++ ++ ++L R A V++ + F +
Sbjct: 129 LDTMLYILGRSRRFDQIWELLVDMRRKDQSLISPRSVQVVLGRIAKVCSVKQTVESFRKF 188
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVY 274
K+ D + F LL LC+ K + A + S K++F D++T NI+L+GW +
Sbjct: 189 KKLVPEFDTACFNALLRTLCQEKSMRDARNVYHSLKHDFRPDLRTFNILLSGW---KSAE 245
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA+ F+ ++ + EPD V+Y ++ K ++ A ++ M ++ PDV++ II
Sbjct: 246 EAEGFFDEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRDEQISPDVISYTSII 305
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
L + +A +VL+EMK GC P+V YN+ I++ C R+ +DEM K S
Sbjct: 306 GGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMDEMVGKGLS 365
Query: 395 CLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
PN T+N + ++ + +RM++ GC +T + + +L+ + +
Sbjct: 366 --PNATTYNLFFRCFYWSNDLGRSCGLYQRMKKTGCLPNTQSCMFLTRLFRRQEKVEMAL 423
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
W +M +KG G V+ L D G+L + +M KG P
Sbjct: 424 ELWNDMVEKGFGSYILVSDVLFDMLCDMGKLVEVEKCCLQMIEKGHKP 471
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 108/243 (44%), Gaps = 12/243 (4%)
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C + E+ R +K ++ E D+ + + L ++ + A ++ ++ R PD+
Sbjct: 176 CSVKQTVESFRKFKKLVP---EFDTACFNALLRTLCQEKSMRDARNVYHSLKHDFR-PDL 231
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T N ++ K EA EM+ G P+V +YN LI CK + +E Y+ +D+
Sbjct: 232 RTFNILLSGW---KSAEEAEGFFDEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDK 288
Query: 388 MEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
M + S P+ I++ ++ L +P++ VL+ M+ GC YN ++ +
Sbjct: 289 MRDEQIS--PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIA 346
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTG 504
+ +EM KG+ P+ +Y + Y L + + M+ G +P ++
Sbjct: 347 NRLGDADGLMDEMVGKGLSPNATTYNLFFRCFYWSNDLGRSCGLYQRMKKTGCLPNTQSC 406
Query: 505 ILV 507
+ +
Sbjct: 407 MFL 409
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 97/236 (41%), Gaps = 11/236 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A FF + RE P +N ++DV + R +V D+M PD++ +
Sbjct: 245 EEAEGFFDEM-REMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRDEQISPDVI---S 300
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESE 249
Y ++ ++A V KE+G D++A+ + C + A+ E
Sbjct: 301 YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMDEMV 360
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ T N+ + ++ + ++ + K+ C P++ + ++ K+
Sbjct: 361 GKGLSPNATTYNLFFRCFYWSNDLGRSCGLYQRMKKTGCLPNTQSCMFLTRLFRRQEKVE 420
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
AL L+ M EKG ++ + + D LC ++ E + +M +G P+ ++
Sbjct: 421 MALELWNDMVEKGFGSYILVSDVLFDMLCDMGKLVEVEKCCLQMIEKGHKPSNVSF 476
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 172/353 (48%), Gaps = 14/353 (3%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N +++ L R RFV + V +M PD+V T L+N + + V A+ +
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV---TVSSLINGFCQGNRVFGAVDLVS 163
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLG 271
+ +E D+ + ++ C+ V A F E++ D T N ++ G C G
Sbjct: 164 KMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSG 223
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+A R +D++ P+ +T+ +NA ++GK A + ++ M + PDV T N
Sbjct: 224 RRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYN 283
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I LC ++ EA ++L M +GC P+V TYN+LI CK KR++ + + EM Q+
Sbjct: 284 SMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQR 343
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVIL-KLYVNWDCEDKV 450
+ + +TFN +++ + E R G + + TY+++L L NW E K
Sbjct: 344 --GLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVE-KA 400
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+E M+K M D +Y ++IHG+ G +EDA F + KG+ P+ T
Sbjct: 401 LVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVT 453
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 132/304 (43%), Gaps = 6/304 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
++EAI +F + L + F LL + + K+ ++ + F + E G+D+ T NI
Sbjct: 50 LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++N C A ++K EPD VT ++ +N + ++ A+ L M E
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
K DVV N IID C + AL + M+ G + TYNSL+ LC R
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK 439
+ +M ++ +PN ITF L+ + K E E M R TYN ++
Sbjct: 230 RLMRDMVMRD--IVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIH 287
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ + + M KG PD +Y +I+G R+++ EM +G+V
Sbjct: 288 GLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVV 347
Query: 500 EPRT 503
+ T
Sbjct: 348 DTVT 351
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 42/300 (14%)
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
N+ EA + ++I+S+ P V ++ ++ + K + LF M G D+ T N
Sbjct: 49 NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I+ LC R AL V+ +M G P+V T +SLI C+ R+ + + +ME+
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVIL---------- 438
C + + +N ++ K V L RMER+G + T TYN ++
Sbjct: 169 R--CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRS 226
Query: 439 ---KLYVNWDCEDKVRHT----------------------WEEMEKKGMGPDQRSYTVMI 473
+L + D V + +EEM ++ + PD +Y MI
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMI 286
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVIKLTSLGL 532
HGL G++++A M KG P+ T L+N K K E K V +++ GL
Sbjct: 287 HGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGF-CKTKRVDEGTKLVREMSQRGL 345
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 14/250 (5%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
D P F A+++ R +F+E + ++EM PD+ TY +++ V
Sbjct: 239 DIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVF---TYNSMIHGLCMHGQV 295
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNII 263
+EA + D G D+ + L+ C+ K V E + E + D T N I
Sbjct: 296 DEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTI 355
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G+ G A+ + + P+ TY+ + L ++ AL LF++M +
Sbjct: 356 IQGYFQAGRPDAAQEIFS---RMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEM 412
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+ D+ T N +I +C + +A ++ + +G P+V TY ++I C+ KR+ +
Sbjct: 413 ELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCR-KRLWDKAD 471
Query: 384 YLDEMEQKNG 393
+L Q++G
Sbjct: 472 FLYRKMQEDG 481
>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 172/358 (48%), Gaps = 30/358 (8%)
Query: 88 DEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVS 147
D +N+ +LKT S + + + L + + T +L+ V+ A FFK +
Sbjct: 39 DATIVNL--VLKTDSQT----LTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLD 92
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMV 204
Y+ S+ F+ +D+ GR R + L + D M N KT+ I+ RY +A
Sbjct: 93 YHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKP 152
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET-FFESEKNEFGYDIKTMNII 263
+ AI +F E G + DL++F +L LC+ K VE+A+ F+ +
Sbjct: 153 DRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFK---------------V 197
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
G+ G + EA F+ + K KCE D VTY T V+ G++ A R+F M +G
Sbjct: 198 FRGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGV 257
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P V T N I LC K + A+ V EM +G +PN TTYN +I+ LC + RME E
Sbjct: 258 LPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAME 317
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVIL 438
++ M K+ C PN +N +++ EE+ V E+M C + DTYN+++
Sbjct: 318 FMARM--KDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILI 373
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 121/293 (41%), Gaps = 31/293 (10%)
Query: 269 VLGNVYEAKRFWKDIIKSKCE---PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+ G + + K W + + + P+ T+A GK A+++F +M E G
Sbjct: 110 IAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQ 169
Query: 326 DVVTCNCIIDALCFKKRI--------------------PEALEVLREMKNRGCLPNVTTY 365
D+ + N I+D LC KR+ EA E +MK R C +V TY
Sbjct: 170 DLNSFNTILDVLCKSKRVEMADNKLFKVFRGFFRAGQLKEAWEFFLQMKKRKCEIDVVTY 229
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERM 422
+++ + +EM + LP+ T+N ++ L K + V V E M
Sbjct: 230 TTVVHGFGVAGEVRKAQRVFNEMIGE--GVLPSVATYNAFIQVLCKKDNVENAISVFEEM 287
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
R G ++ TYNV+++ + +K M+ P+ + Y V+I D +
Sbjct: 288 LRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEI 347
Query: 483 EDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERG--EQGKKVIKLTSLGL 532
E L+ F +M +P T IL++ M ++ K GK +I++ G
Sbjct: 348 EKGLNVFEKMGDADCLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERGF 400
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 32/230 (13%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWE-----KGRK--PDVVTCNCIIDALCFKKRIPEA 346
TYA ++ + LR ++ +W + R+ P+ T I + + A
Sbjct: 96 TYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRA 155
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV--------------------YEYLD 386
+++ M GC+ ++ ++N+++ LCK KR+E +E+
Sbjct: 156 IKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGFFRAGQLKEAWEFFL 215
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLYVN 443
+M+++ C + +T+ ++ EV V M G S TYN +++
Sbjct: 216 QMKKR--KCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCK 273
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
D + +EEM +KG P+ +Y V+I GL GR+E A+ + M+
Sbjct: 274 KDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMK 323
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 180/381 (47%), Gaps = 24/381 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A FF W + Y + +N +LD+L ++ +V+ ++ P+LV T+
Sbjct: 10 AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLV---TFK 66
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKN 251
IL+ A A+ EF D+ F L+ L + + + A FE+ E +
Sbjct: 67 ILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESS 126
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNALTKKGKLG 309
+I T N +++G C GN+ +A+ +++I+ K PD VTY T +NA + ++
Sbjct: 127 RVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIR 186
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A + M G PDV+TCN ++ +C + EALE+L MK G +P+V TYNS+I
Sbjct: 187 EACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSII 246
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNG 426
LC ++ E L M SC P+ +TFN LL K +P VLE M R
Sbjct: 247 HALCVAGKVVEAAEILKTM-----SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCREN 301
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
TY +++ + EE+ ++G PD +YT ++ GL G +E+A
Sbjct: 302 ILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAH 361
Query: 487 SYFHEMRLKGMVPEPRTGILV 507
EM ++G RTG+++
Sbjct: 362 KLVKEMSVRGC----RTGVVM 378
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 160/358 (44%), Gaps = 44/358 (12%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP FN +LD +A ++V +EM PD++ TY IL+N V+
Sbjct: 268 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVI---TYTILVNGLCRVGQVQV 324
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
A + + G + D+ A+ +L+ LC+ +E A E + + +++
Sbjct: 325 AFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVS 384
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C GNV++A+ +++ P TY + L K G + A+ L + +G P
Sbjct: 385 GYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVP 444
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DVVT N +ID LC R+ EA ++ EM +RGC PN T S++ LC++ R++ + +
Sbjct: 445 DVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLV 504
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
EM +K + PN + + L+ L K +RM
Sbjct: 505 VEMSRKRHA--PNVVVYTSLIDGLCKS-------DRM----------------------- 532
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D + M +G+ D +Y +I + GR+ +A++ + EM +G +P+ T
Sbjct: 533 --DDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGST 588
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 165/366 (45%), Gaps = 18/366 (4%)
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNR 197
+ + + G +P +N +++ RA R E ++M PD++ T IL++
Sbjct: 157 EMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVL---TCNILVSG 213
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAETFFESEKNEFGYD 256
VEEA+ + D K G + D+ + +++ LC K VE AE + D
Sbjct: 214 ICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEIL---KTMSCSPD 270
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ T N +L+G+C G + A +++ + PD +TY VN L + G++ A L +
Sbjct: 271 LVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLE 330
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
+ +G PDV+ ++D LC I EA ++++EM RGC V Y+SL+ C+
Sbjct: 331 EIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAG 390
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDT 433
+ E L EM N +P T+N +L L K + ++ + G T
Sbjct: 391 NVHKAREILAEMVSIN--MVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVT 448
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
YN ++ + + +EM +G P+ + ++ GL GR++DA S EM
Sbjct: 449 YNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS 508
Query: 494 LKGMVP 499
K P
Sbjct: 509 RKRHAP 514
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 155/357 (43%), Gaps = 20/357 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM--------PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
+N ++ L ++ + ++ +EM PD+V TY L+N + A + EA
Sbjct: 135 YNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIV---TYNTLINAFYRASRIREACAF 191
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCV 269
++ K G D+ L+ +C+ VE A + K D+ T N I++ CV
Sbjct: 192 REKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCV 251
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G V EA K + C PD VT+ T ++ K G L AL + + M + PDV+T
Sbjct: 252 AGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVIT 308
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+++ LC ++ A +L E+ +G +P+V Y SL+ LCK +E ++ + EM
Sbjct: 309 YTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMS 368
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ C + ++ L+ + V +L M TYN++L +
Sbjct: 369 VRG--CRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGS 426
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K ++ +G PD +Y +I GL R+ +A EM +G P T
Sbjct: 427 ISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVT 483
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 36/272 (13%)
Query: 235 RYKHVEVAETFFE--SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
R ++A FF+ E++ + +D+ + N +L+ G+ + + +KD++ S C P+
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP-EALEVLR 351
VT+ + K G+ AL +A+ E PDV N +I L FK P +A+++
Sbjct: 63 VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGL-FKDGNPDQAVKLFE 121
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
M++ P + TYN++I LCK +E E L+EM +K G P+ +T+N L+ + +
Sbjct: 122 NMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYR 181
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
+ R C E+M+ G+ PD + +
Sbjct: 182 ASRI--------REACAFR------------------------EKMKAAGINPDVLTCNI 209
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ G+ G +E+AL M+L G VP+ T
Sbjct: 210 LVSGICKDGDVEEALEILDGMKLAGPVPDVIT 241
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
Query: 168 RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
+AR + + + +P L TY I+L + +A+ + G + D+ +
Sbjct: 394 KAREILAEMVSINMVPPLF---TYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYN 450
Query: 228 NLLLWLCRYKHVEVAETFFE--SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
L+ LC+ V A + + + F D+ T+ ++ G C +G V +A ++ +
Sbjct: 451 TLIDGLCKANRVREACDLADEMASRGCFPNDV-TLGSVVFGLCRVGRVDDAWSLVVEMSR 509
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+ P+ V Y + ++ L K ++ A + AM +G D +I ++ R+ E
Sbjct: 510 KRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAE 569
Query: 346 ALEVLREMKNRGCLPNVTTYNSL 368
A+ + EM RG LP+ +T +L
Sbjct: 570 AMAMYDEMVARGFLPDGSTSKTL 592
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 184/385 (47%), Gaps = 12/385 (3%)
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---L 185
++ Y D FK S+ G Y G + F ++++ + F L QVFD M +
Sbjct: 37 LSPYESDAPIPDQIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRV 96
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
EK + ++ Y AH+ E+AI +F R EF + +F ++L + + A
Sbjct: 97 FIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALE 156
Query: 245 FFE---SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
F+E K ++ + N+++ C LG V A ++++ KCEPD TY T ++
Sbjct: 157 FYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDG 216
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K+ ++ A+ L M +G P VT N +I+ LC K + +++ M +GC+PN
Sbjct: 217 LCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPN 276
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-KKPEEVPWV-- 418
TYN++I LC +++ LD M C+PN++T+ L+ L K+ V V
Sbjct: 277 EVTYNTIINGLCLKGKLDKAVSLLDRMVASK--CVPNDVTYGTLINGLVKQGRSVDGVHL 334
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L +E G + Y+ ++ + ++ W++M +KG P+ Y+ +I GL
Sbjct: 335 LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCR 394
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRT 503
+G+L++A EM KG P T
Sbjct: 395 EGKLDEAKEILCEMVNKGCTPNAFT 419
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 189/398 (47%), Gaps = 34/398 (8%)
Query: 115 QCELTLTD-DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV 173
QC T+ + ++NVI + A + V + + SP FN ++ + +
Sbjct: 130 QCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVD 189
Query: 174 ELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
I+VF EM PD+ TY L++ ++EA+ + D + G F
Sbjct: 190 RAIEVFREMAIQKCEPDVF---TYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFN 246
Query: 228 NLLLWLCR----YKHVEVAETFF--ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
L+ LC+ + ++ + F NE Y N I+NG C+ G + +A
Sbjct: 247 VLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTY-----NTIINGLCLKGKLDKAVSLLD 301
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
++ SKC P+ VTY T +N L K+G+ + L ++ E+G + + +I L ++
Sbjct: 302 RMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEE 361
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ EA+ + ++M +GC PN+ Y++LI LC+ +++ E L EM K C PN T
Sbjct: 362 KSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK--GCTPNAFT 419
Query: 402 FNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED-KVRHT---W 454
++ L+K K ++ V + M +N C + Y+V+ ++ CED K+R W
Sbjct: 420 YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVL----IHGLCEDGKLREAMMMW 475
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
M +G+ PD +Y+ MIHGL + G +E L F+EM
Sbjct: 476 THMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM 513
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 9/293 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N I++ L + + + + D M + N+ TYG L+N + + +
Sbjct: 275 PNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHL 334
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWC 268
+E G + A+ L+ L + + E A ++ EK +I + +++G C
Sbjct: 335 LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG-CQPNIVVYSALIDGLC 393
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G + EAK +++ C P++ TY++ + K G A+R+++ M + P+ +
Sbjct: 394 REGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEI 453
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+ +I LC ++ EA+ + M RG P+V Y+S+I LC +E + +EM
Sbjct: 454 CYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM 513
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVIL 438
+ P+ +T+N LL++L K + +L M GC T N+ L
Sbjct: 514 LCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFL 566
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 132/312 (42%), Gaps = 57/312 (18%)
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
GR+ V L+ +E NE Y L++ EEA+G++ + E G ++ +
Sbjct: 326 GRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVY 385
Query: 227 QNLLLWLCRYKHVEVAETFF------ESEKNEFGYD------IKTMN------------- 261
L+ LCR ++ A+ N F Y KT N
Sbjct: 386 SALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAK 445
Query: 262 -----------IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
++++G C G + EA W ++ PD V Y++ ++ L G +
Sbjct: 446 NNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEV 505
Query: 311 ALRLFQAMW--EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
L+LF M E +PDVVT N ++ ALC + I A+++L M +RGC P++ T N
Sbjct: 506 GLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIF 565
Query: 369 IKHLC-KIKRMETVYEYLDEM-------EQKNGSC-----------LPNEITFNYLLKSL 409
+ L K+ + E+LDE+ ++ G+ PN T+ ++ L
Sbjct: 566 LNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPEL 625
Query: 410 KKPEEVPWVLER 421
KP++V ++++
Sbjct: 626 CKPKKVQAIIDK 637
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 28/274 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
E A +K + +G P V++A++D L R + E ++ EM + N TY
Sbjct: 364 EEAMGLWKKMVEKG-CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSS 422
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE- 252
L+ + ++AI V+ + + + + L+ LC + A +
Sbjct: 423 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG 482
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDII--KSKCEPDSVTYATFVNALTKKGKLGT 310
D+ + +++G C G+V + + +++ +S +PD VTY + AL K+ +
Sbjct: 483 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISH 542
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFK---------------------KRIPEALEV 349
A+ L +M ++G PD++TCN ++AL K +RI A ++
Sbjct: 543 AIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKI 602
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+ M + PN +T+ +I LCK K+++ + +
Sbjct: 603 IEVMLQKFLPPNASTWERIIPELCKPKKVQAIID 636
>gi|224107981|ref|XP_002314676.1| predicted protein [Populus trichocarpa]
gi|222863716|gb|EEF00847.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 205/444 (46%), Gaps = 12/444 (2%)
Query: 64 IETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDD 123
IE+ + + SL+ E S D A V ILK +S +E ALN+ ++ T D
Sbjct: 87 IESHKNIASLSLLSEAS-------DSDAHKVGEILKKHYLSEDAVVE-ALNESGISATHD 138
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP 183
L+ ++ R+ W A F W + Y ++N+++D+LG++R+F + + EM
Sbjct: 139 LVSQLLKRFSNQWLIALGVFIWAKNQTGYVHKPEIYNSMIDILGKSRKFSLMWDLVQEMS 198
Query: 184 DL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
L V+ T G ++ R EAI F ++FG A L+ L R VE
Sbjct: 199 GLNGYVSLVTMGKVMKRLVRDGKYNEAIDAFRGLEKFGLSKSTEAMNVLMDILARNGRVE 258
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A + D ++ NI+ +G+C +A++ +++ + P+ V+Y F+
Sbjct: 259 DARAVALEFEGCLTLDYRSYNILSSGYCKARMFGDARKTMEEMEERGFHPNVVSYTAFIE 318
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A ++ + M EKG PD++T I AL ++I +ALE+ E+K G +
Sbjct: 319 AYGEQKDFRNVEIILNEMQEKGCPPDLITYTVYIRALGKARQINKALEICEEIKRNGFVL 378
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN-GSCLPNEITFNYLLKSLKKPEEVPWVL 419
Y SLI LC R++ + +++E++ G L +L + E +L
Sbjct: 379 GTQFYCSLIHSLCLSGRLKDAWNIFEDVEKQGVGRDLGMYKAMISAACALSQDESALKLL 438
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+ME + CK TY +LK+ ++ M + + D +Y +++HGL +
Sbjct: 439 HKMEEDSCKPDVQTYAPLLKMCCRKKSMKMLKFLLNHMFENDVSIDIVTYDLLVHGLRKQ 498
Query: 480 GRLEDALSYFHEMRLKGMVPEPRT 503
G+L+ A +F E LKGMVP +T
Sbjct: 499 GKLKYACFFFQEAVLKGMVPCDKT 522
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 156/350 (44%), Gaps = 41/350 (11%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
T+ IL+N A M+ +A + G D+ + ++ WL + K ++ A E
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK--- 305
N I T N +LNG C +G + EA + I+ + C PD VTY + ++ L KK
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 306 --------------------------------GKLGTALRLFQAMWEKGRKPDVVTCNCI 333
GK+ A +++ M +G PDVVT + +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
ID LC RI A+ + + M+ RG PN Y++LI LCK ++M+ E L +M K
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM--KKA 238
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
C P+ IT+N L+ L K +V + M GCK TYN+++ + D
Sbjct: 239 FCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 298
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+++M P+ +Y +I GL + +L A Y+ M+ +G P+
Sbjct: 299 CGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPD 348
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 161/352 (45%), Gaps = 15/352 (4%)
Query: 157 NVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
+ + I+D L + ++ E + + +++ P + TY LLN +EEAI +
Sbjct: 35 HTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIA---TYNALLNGLCKMGRLEEAIDL 91
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCV 269
+ + G D+ + +L+ L + K E + F E D ++ G
Sbjct: 92 LRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQ 151
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + +A +K + C PD VT +T ++ L K G++G A+R+F++M +G P+ V
Sbjct: 152 AGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVV 211
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ +I LC +++ ALE+L +MK C P+ TYN LI LCK + + DEM
Sbjct: 212 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEML 271
Query: 390 QKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ C P+ T+N L+ K + V + M + C + TY ++
Sbjct: 272 E--AGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQ 329
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
K ++ M+++G PD Y+ ++ GL G+LE F EM G+
Sbjct: 330 LTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA 381
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 128/303 (42%), Gaps = 41/303 (13%)
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
E+ N DI T I++ + EA + I + C P TY +N L K G
Sbjct: 24 ETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMG 83
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR------------------------ 342
+L A+ L + + + G PDVVT +ID L KKR
Sbjct: 84 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYT 143
Query: 343 -----------IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
IP+A V + M ++GC+P+V T +++I LCK R+ ME +
Sbjct: 144 ALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR 203
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCED 448
+ PNE+ ++ L+ L K ++ LE +M++ C T TYN+++
Sbjct: 204 GLA--PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVA 261
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILV 507
R ++EM + G PD +Y ++I G G + A F +M P T G L+
Sbjct: 262 AARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLI 321
Query: 508 NDM 510
+ +
Sbjct: 322 SGL 324
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 126/256 (49%), Gaps = 6/256 (2%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T +I++NG G + +A ++ + C D TY T V+ L K K+ A+ L + +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
G P + T N +++ LC R+ EA+++LR++ + GC P+V TY SLI L K KR
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYN 435
Y+ EM + G L + + + L++ L + ++P V + M GC T +
Sbjct: 121 FEAYKLFKEMASR-GLAL-DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLS 178
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++ ++ ME +G+ P++ Y+ +IHGL +++ AL +M+
Sbjct: 179 TMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 238
Query: 496 GMVPEPRT-GILVNDM 510
P+ T IL++ +
Sbjct: 239 FCTPDTITYNILIDGL 254
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 157/317 (49%), Gaps = 6/317 (1%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE- 249
+G L A + + ++ FG ++ + L+ LCR HV A +
Sbjct: 95 FGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMF 154
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K D T N ++NG C+ G + EA + ++++ +PD ++Y+T +N L K G
Sbjct: 155 KLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTS 214
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL+L + M EKG KP++V IID+LC + +A+++L EM +RG P+V TY++++
Sbjct: 215 MALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTIL 274
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
C + + +EM +N +PN +TF L+ L K E V E M + G
Sbjct: 275 HGFCSLGHLNEATILFNEMVGRN--VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKG 332
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ + TYN ++ Y + D+ + + M KG P SY ++I+G + RL++A
Sbjct: 333 AEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAK 392
Query: 487 SYFHEMRLKGMVPEPRT 503
S EM K + P+ T
Sbjct: 393 SLLVEMSEKELTPDTVT 409
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 181/361 (50%), Gaps = 17/361 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + FN +++ E + +F+EM PD++ +Y ++N + A
Sbjct: 160 PDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVI---SYSTVINGLCKSGNTSMA 216
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+ + + +E G +L A+ ++ LC+ V A SE + G D+ T + IL+
Sbjct: 217 LQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLL-SEMVDRGIPPDVVTYSTILH 275
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C LG++ EA + +++ P++VT+ V+ L K+G + A +F+AM +KG +P
Sbjct: 276 GFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEP 335
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ T N ++D C ++ EA +VL M ++GC P V +YN LI CK +R++ L
Sbjct: 336 NAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLL 395
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
EM +K + P+ +T++ L++ L +P+E + + M +G TY+ +L
Sbjct: 396 VEMSEKELT--PDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLC 453
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
D+ + M++ + PD Y ++I G++ G+LE A F ++ G+ P R
Sbjct: 454 KHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIR 513
Query: 503 T 503
T
Sbjct: 514 T 514
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 159/354 (44%), Gaps = 25/354 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + I+D L + + + + EM PD+V TY +L+ + + + EA
Sbjct: 230 PNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVV---TYSTILHGFCSLGHLNEA 286
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKNEFGYDIKTMN 261
+F+ + + F L+ LC+ V A FE+ E N + Y N
Sbjct: 287 TILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTY-----N 341
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++G+C+ + EA++ ++ C P +Y +N K+ +L A L M EK
Sbjct: 342 ALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEK 401
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
PD VT + ++ LC R EAL + +EM + G LP++ TY++L+ LCK ++
Sbjct: 402 ELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEA 461
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
+ L M++ P+ + +N L++ + K E + ++ +G + + TY +++
Sbjct: 462 LKLLKSMQESKIE--PDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMI 519
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
K + D+ + +ME G P+ SY V+I G A+ EM
Sbjct: 520 KGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 155/328 (47%), Gaps = 11/328 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P ++ IL E +F+EM + N T+ IL++ MV EA V
Sbjct: 265 PDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCV 324
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
F+ + G + + L+ C ++ A+ + ++ + + NI++NG+C
Sbjct: 325 FEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCK 384
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ EAK ++ + + PD+VTY+T + L + G+ AL LF+ M G PD++T
Sbjct: 385 RRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMT 444
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ ++D LC + EAL++L+ M+ P++ YN LI+ + ++E E ++
Sbjct: 445 YSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLF 504
Query: 390 QKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYV-NWD 445
P T+ ++K L K +E + +ME +G ++ +YNVI++ ++ N D
Sbjct: 505 ADGIQ--PTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQD 562
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
+R +EM K D ++ +++
Sbjct: 563 SSTAIR-LIDEMVGKRFSADSSTFQMLL 589
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 5/223 (2%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P V + F+ ++ KK + T + L M G +V + N +I+ LC + A+ V
Sbjct: 90 PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
L +M G P+ T+N+LI C ++ +EM ++ P+ I+++ ++ L
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQ--PDVISYSTVINGL 207
Query: 410 KKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K L+ +ME GCK + Y I+ + EM +G+ PD
Sbjct: 208 CKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDV 267
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
+Y+ ++HG G L +A F+EM + ++P T ++ D
Sbjct: 268 VTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 84/225 (37%), Gaps = 45/225 (20%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + +N +++ + RR E + EM PD V TY L+ +E
Sbjct: 369 APVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTV---TYSTLMQGLCQVGRPQE 425
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILN 265
A+ +F G L DL + LL LC++ H++ A +S ++++ DI NI++
Sbjct: 426 ALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIE 485
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG------------------- 306
G + G + AK + + +P TY + L K+G
Sbjct: 486 GMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLP 545
Query: 307 ----------------KLGTALRLFQAMWEKGRKPDVVTCNCIID 335
TA+RL M K D T ++D
Sbjct: 546 NSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590
>gi|242041823|ref|XP_002468306.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
gi|241922160|gb|EER95304.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
Length = 519
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 185/410 (45%), Gaps = 16/410 (3%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRF---DWEAAYTFFKWVSREGDYSPGSNV 158
S +T +E AL + L+ L+ V+ R+RF D A + + G +P
Sbjct: 53 SAATPSAMESALAASAVPLSSPLLDAVMRRFRFAHGDPLRALSLLSLAADRGGVAPSPYA 112
Query: 159 FNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDR- 213
+ L VLGRARRF + + PD V +T I+L R A V E + F R
Sbjct: 113 IDTALYVLGRARRFPHMWDLLATTRRICPDAVTSRTAMIVLGRVAKVCSVHETVASFRRL 172
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
+ F +D F LL LC+ K + A F + K +F + T NI+L+GW +
Sbjct: 173 ARMFHAVDPACLFNALLRTLCQEKSMSDARNVFHALKYDFRVNRHTFNILLSGW---KSA 229
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+A+ F ++ + EPD VTY + ++ K + A +L M EK PD++T +
Sbjct: 230 EDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRDVEKAYKLLDEMREKDISPDIITYTSL 289
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I L + +A ++L+EM GC P+V YN+ I++ KR+ + +D+M K
Sbjct: 290 IGGLGLIGQPDKARDLLKEMHELGCSPDVPAYNAAIRNFVIAKRLGDAFALMDQMASKG- 348
Query: 394 SCLPNEITFNYLLKSLKKPEEV--PWVL-ERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
+PN T+N + ++ W L ERM GC +T + I++L + +
Sbjct: 349 -LMPNPTTYNLFFRCYYWAFDIGSTWRLYERMRSEGCFPNTQSCMFIIRLCHRYGKVGQA 407
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
W +M G V+ L D+G+LE+ F +M G P
Sbjct: 408 LELWSDMVSNRFGSFTLVSDVLFDLLCDEGKLEEVERCFCQMVEFGQKPS 457
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 34/163 (20%)
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
K +A + EM+ G P++ TYNSLI CK + +E Y+ LDEM +K+ S P+ I
Sbjct: 227 KSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRDVEKAYKLLDEMREKDIS--PDII 284
Query: 401 TFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
T+ L+ L +I + DK R +EM +
Sbjct: 285 TYTSLIGGL-------------------------GLIGQ-------PDKARDLLKEMHEL 312
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G PD +Y I RL DA + +M KG++P P T
Sbjct: 313 GCSPDVPAYNAAIRNFVIAKRLGDAFALMDQMASKGLMPNPTT 355
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 96/239 (40%), Gaps = 17/239 (7%)
Query: 308 LGTALRLFQAMWE---KGRK--PDVVTCNCIIDALCFKKRIPEALEVLREMKNRG----C 358
LG A R F MW+ R+ PD VT + L ++ E + +
Sbjct: 120 LGRARR-FPHMWDLLATTRRICPDAVTSRTAMIVLGRVAKVCSVHETVASFRRLARMFHA 178
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV 418
+ +N+L++ LC+ K M ++ N TFN LL K E+
Sbjct: 179 VDPACLFNALLRTLCQEKSMSDARNVFHALKYDFRV---NRHTFNILLSGWKSAEDAEAF 235
Query: 419 LERMERNGCKMSTDTYNVILKLYV-NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ M G + TYN ++ + N D E K +EM +K + PD +YT +I GL
Sbjct: 236 VAEMRELGVEPDLVTYNSLIDCHCKNRDVE-KAYKLLDEMREKDISPDIITYTSLIGGLG 294
Query: 478 DKGRLEDALSYFHEMRLKGMVPE-PRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
G+ + A EM G P+ P + + I K G+ + ++ S GL N
Sbjct: 295 LIGQPDKARDLLKEMHELGCSPDVPAYNAAIRNFVIA-KRLGDAFALMDQMASKGLMPN 352
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 186/386 (48%), Gaps = 12/386 (3%)
Query: 128 VINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--- 184
V++ R ++ FK S+ G Y G + F ++++ + F L QVFD M
Sbjct: 52 VVSVSRSFLQSETYIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERR 111
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCRYKHVEVAE 243
+ EK + ++ Y AH+ E+AI +F R EF + +F ++L + + A
Sbjct: 112 VFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRAL 171
Query: 244 TFFE---SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
F+E K ++ + N+++ C LG V A ++++ KCEPD TY T ++
Sbjct: 172 EFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMD 231
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K+ ++ A+ L M +G P VT N +I+ LC K + +++ M +GC+P
Sbjct: 232 GLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVP 291
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-KKPEEVPWV- 418
N TYN++I LC +++ LD M C+PN++T+ L+ L K+ V V
Sbjct: 292 NEVTYNTIINGLCLKGKLDKAVSLLDRMVASK--CVPNDVTYGTLINGLVKQGRSVDGVH 349
Query: 419 -LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
L +E G + Y+ ++ + ++ W++M +KG P+ Y+ +I GL
Sbjct: 350 LLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLC 409
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRT 503
+G+L++A EM KG P T
Sbjct: 410 REGKLDEAKEILCEMVNKGCTPNAFT 435
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 189/398 (47%), Gaps = 34/398 (8%)
Query: 115 QCELTLTD-DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV 173
QC T+ + ++NVI + A + V + + SP FN ++ + +
Sbjct: 146 QCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVD 205
Query: 174 ELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
I+VF EM PD+ TY L++ ++EA+ + D + G F
Sbjct: 206 RAIEVFREMAIQKCEPDVF---TYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFN 262
Query: 228 NLLLWLCR----YKHVEVAETFF--ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
L+ LC+ + ++ + F NE Y N I+NG C+ G + +A
Sbjct: 263 VLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTY-----NTIINGLCLKGKLDKAVSLLD 317
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
++ SKC P+ VTY T +N L K+G+ + L ++ E+G + + +I L ++
Sbjct: 318 RMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEE 377
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ EA+ + ++M +GC PN+ Y++LI LC+ +++ E L EM K C PN T
Sbjct: 378 KSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK--GCTPNAFT 435
Query: 402 FNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED-KVRHT---W 454
++ L+K K ++ V + M +N C + Y+V+ ++ CED K+R W
Sbjct: 436 YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVL----IHGLCEDGKLREAMMMW 491
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
M +G+ PD +Y+ MIHGL + G +E L F+EM
Sbjct: 492 THMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM 529
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 9/293 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N I++ L + + + + D M + N+ TYG L+N + + +
Sbjct: 291 PNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHL 350
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWC 268
+E G + A+ L+ L + + E A ++ EK +I + +++G C
Sbjct: 351 LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG-CQPNIVVYSALIDGLC 409
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G + EAK +++ C P++ TY++ + K G A+R+++ M + P+ +
Sbjct: 410 REGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEI 469
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+ +I LC ++ EA+ + M RG P+V Y+S+I LC +E + +EM
Sbjct: 470 CYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM 529
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVIL 438
+ P+ +T+N LL++L K + +L M GC T N+ L
Sbjct: 530 LCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFL 582
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 132/312 (42%), Gaps = 57/312 (18%)
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
GR+ V L+ +E NE Y L++ EEA+G++ + E G ++ +
Sbjct: 342 GRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVY 401
Query: 227 QNLLLWLCRYKHVEVAETFF------ESEKNEFGYD------IKTMN------------- 261
L+ LCR ++ A+ N F Y KT N
Sbjct: 402 SALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAK 461
Query: 262 -----------IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
++++G C G + EA W ++ PD V Y++ ++ L G +
Sbjct: 462 NNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEV 521
Query: 311 ALRLFQAMW--EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
L+LF M E +PDVVT N ++ ALC + I A+++L M +RGC P++ T N
Sbjct: 522 GLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIF 581
Query: 369 IKHLC-KIKRMETVYEYLDEM-------EQKNGSC-----------LPNEITFNYLLKSL 409
+ L K+ + E+LDE+ ++ G+ PN T+ ++ L
Sbjct: 582 LNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPEL 641
Query: 410 KKPEEVPWVLER 421
KP++V ++++
Sbjct: 642 CKPKKVQAIIDK 653
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 115/257 (44%), Gaps = 27/257 (10%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P V++A++D L R + E ++ EM + N TY L+ + ++AI V
Sbjct: 396 PNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRV 455
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
+ + + + + L+ LC + A + D+ + +++G C
Sbjct: 456 WKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCN 515
Query: 270 LGNVYEAKRFWKDII--KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
G+V + + +++ +S +PD VTY + AL K+ + A+ L +M ++G PD+
Sbjct: 516 AGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDL 575
Query: 328 VTCNCIIDALCFK---------------------KRIPEALEVLREMKNRGCLPNVTTYN 366
+TCN ++AL K +RI A +++ M + PN +T+
Sbjct: 576 ITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWE 635
Query: 367 SLIKHLCKIKRMETVYE 383
+I LCK K+++ + +
Sbjct: 636 RIIPELCKPKKVQAIID 652
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 196/433 (45%), Gaps = 63/433 (14%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT 190
R + D AA W S++ ++ P S+++ IL LG+ F + + EM L +
Sbjct: 62 RRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQID 121
Query: 191 YGILL---NRYAAAHMVEEAIGVFDRRK-EFG-ELD------------------------ 221
G+LL + YA + EE + + + + EFG LD
Sbjct: 122 RGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVH 181
Query: 222 ----------DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCV 269
D+S F L+ LC+ + A E E + +G D KT ++ G+
Sbjct: 182 STMVSKGIKPDVSTFNILIKALCKAHQIRPAILVME-EMSSYGLVPDEKTFTTLMQGFIE 240
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYA----------------TFVNALTKKGKLGTALR 313
GN+ A R + ++ + C +VT +F++ ++ +GK A+
Sbjct: 241 EGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIE 300
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
L+ M KG +PD T N +ID+LC++ ++ EAL +LREM+ GC NV TYN+LI C
Sbjct: 301 LYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFC 360
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMS 430
K K++E E D+ME + S N +T+N L+ L ++ +E ++++M G K
Sbjct: 361 KNKKIEEAEEIFDQMEIQGLS--RNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPD 418
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TYN +L + K + M G PD +Y +I GL GR+E A
Sbjct: 419 KFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLR 478
Query: 491 EMRLKGMVPEPRT 503
++LKGMV P
Sbjct: 479 SIQLKGMVLTPHA 491
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAETFFESEKNEFGYDIKTMNIILN 265
AI +++ K G D + L+ LC R K E E E + ++ T N +++
Sbjct: 298 AIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLID 357
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C + EA+ + + +SVTY T ++ L K ++ A +L M +G KP
Sbjct: 358 GFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKP 417
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D T N ++ C + I +A ++++ M + GC P++ TY +LI LCK R+E L
Sbjct: 418 DKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLL 477
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
++ K G ++ YN +++
Sbjct: 478 RSIQLK----------------------------------GMVLTPHAYNPVIQALFKRK 503
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK-GRLEDALSYFHEMRLKGMVPE 500
+ + EME+KG PD +Y ++ GL + G + +A+ + EM KG +PE
Sbjct: 504 RTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPE 559
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 6/243 (2%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRR 214
+N ++D + ++ E ++FD+M N TY L++ + V+EA + D+
Sbjct: 351 TYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQM 410
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNV 273
G D + ++L + CR ++ A ++ N DI T ++ G C G V
Sbjct: 411 IMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRV 470
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
A R + I Y + AL K+ + A+RLF+ M EKG PD T +
Sbjct: 471 EVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIV 530
Query: 334 IDALC-FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD-EMEQK 391
L I EA++ + EM +G LP +++ L + LC + +T+ + +D ME+
Sbjct: 531 FRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKA 590
Query: 392 NGS 394
N S
Sbjct: 591 NFS 593
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 181/373 (48%), Gaps = 22/373 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKTYGILLNRYAAAHMVEEA 207
P +N I+D + E ++ + +PD V TY L+N A VE A
Sbjct: 288 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQV---TYCSLINGLCAEGDVERA 344
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNG 266
+ +F+ + G D+ + +L+ LC + + E + DI+T NI++NG
Sbjct: 345 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +GN+ +A D I PD T+ T ++ K+ KL +AL+L + MWE G PD
Sbjct: 405 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 464
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+T N +++ LC ++ E E +EM +GC PN TYN LI++ C+ +ME + +
Sbjct: 465 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 524
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLY-- 441
+M Q+ P+ ++FN L+ + E + +++E G + DT+N ++ +
Sbjct: 525 KMSQEG--LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 582
Query: 442 -VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+N +K+ ++EM KG D +Y V+I G ++ A + EM KG +P
Sbjct: 583 KLNMHMAEKI---FDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPS 639
Query: 501 PRT-GILVNDMNI 512
T G ++N + +
Sbjct: 640 MSTFGRVINSLTV 652
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 154/351 (43%), Gaps = 49/351 (13%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
+N + L A R E +++ D M PD+V TY L+ M +EA+ R
Sbjct: 224 YNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVV---TYNTLIRGLCKKSMPQEAMHYLRR 280
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
G L D +F Y N I++G+C + V
Sbjct: 281 MMNQGCLPD-----------------------------DFTY-----NTIIDGYCKISMV 306
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA KD + PD VTY + +N L +G + AL LF KG KPD+V N +
Sbjct: 307 QEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSL 366
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
+ LC + I AL+V+ EM GC P++ TYN +I LCK+ + +++ K
Sbjct: 367 VKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG- 425
Query: 394 SCLPNEITFNYLL----KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
LP+ TFN L+ K LK + V ERM G T TYN +L ++
Sbjct: 426 -YLPDVFTFNTLIDGYCKRLKLDSALQLV-ERMWEYGIAPDTITYNSVLNGLCKAGKVNE 483
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
V T++EM KG P+ +Y ++I ++E+A +M +G+ P+
Sbjct: 484 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 534
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 162/383 (42%), Gaps = 43/383 (11%)
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKN 251
++ YA H +A +FD+ +L+AF +L LC+ V E + +
Sbjct: 157 VVCGLYAHGH-THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR 215
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
++ T NI + G C G + EA R D +++ PD VTY T + L KK A
Sbjct: 216 GMSINLFTYNIWIRGLCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSMPQEA 274
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALC----------------FKKRIPE---------- 345
+ + M +G PD T N IID C FK +P+
Sbjct: 275 MHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 334
Query: 346 ---------ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
ALE+ E + +G P++ YNSL+K LC + + ++EM ++ C
Sbjct: 335 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG--CH 392
Query: 397 PNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
P+ T+N ++ L K + V+ G T+N ++ Y D
Sbjct: 393 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 452
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
E M + G+ PD +Y +++GL G++ + F EM LKG P P T ++ + +
Sbjct: 453 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 512
Query: 514 LKERGEQGKKVIKLTSLGLKGNA 536
+ E K ++K++ GL +A
Sbjct: 513 SNKMEEASKVIVKMSQEGLHPDA 535
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 139/314 (44%), Gaps = 11/314 (3%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK-HVEVAETFFESE 249
Y + YA A + +A+ F+R F A+ ++ L H + + +
Sbjct: 53 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
D+ T I L +C+ + A R ++++ +V Y T V L G
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALR----LLRALPHRGAVAYCTVVCGLYAHGHTH 168
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A +LF M P++ N ++ ALC + + EA +L ++ RG N+ TYN I
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 228
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNG 426
+ LC+ R+ +D M +P+ +T+N L++ L K P+E L RM G
Sbjct: 229 RGLCEAGRLPEAVRLVDGMR---AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 285
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
C TYN I+ Y + ++ KG PDQ +Y +I+GL +G +E AL
Sbjct: 286 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 345
Query: 487 SYFHEMRLKGMVPE 500
F+E + KG+ P+
Sbjct: 346 ELFNEAQAKGIKPD 359
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + +N++L+ L +A + E+ + F EM P N TY IL+ + ++ +EE
Sbjct: 462 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP---NPITYNILIENFCRSNKMEE 518
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILN 265
A V + + G D +F L+ CR +E A F+ E+ + T N ++
Sbjct: 519 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 578
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+ N++ A++ + +++ DS TY ++ K + A M +KG P
Sbjct: 579 AFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 638
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
+ T +I++L R+ +A+ ++ M G +P V
Sbjct: 639 SMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 43/337 (12%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMN 261
++EA+ F+R F LL + + KH + + + FG D+ T+
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSL-SRQMDSFGIPPDVYTLA 84
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I++N C L V A I+K +PD+ T+ T + L +GK+G AL LF M +
Sbjct: 85 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 144
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G +P+VVT +I+ LC +++ EA + EM +G PN+ TYNSLI LCK+ + V
Sbjct: 145 GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHV 204
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKK--------------------PEEVPW---- 417
++EM + +P+ T N ++ +L K P V +
Sbjct: 205 TTLMNEM--VDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262
Query: 418 --------------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
V + M C + +YN ++ Y DK + +EEM ++ +
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 322
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
P+ +Y +IHGL GRL+DA+S FHEM +G +P+
Sbjct: 323 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 359
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 176/403 (43%), Gaps = 34/403 (8%)
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------ 182
+NR F + A K + P + F ++ L + E + +FD+M
Sbjct: 93 LNRVDFAFSALAKILKL-----GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 147
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL---LLWLCRYKHV 239
P++V TYG L+N V EA +F G ++ + +L L LC +KHV
Sbjct: 148 PNVV---TYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHV 204
Query: 240 EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
E ++ D+ T+N +++ C G V EA +I EP+ VTY +
Sbjct: 205 TTLMN--EMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ + ++ A+++F M K +V++ N +I+ C + + +A+ + EM +
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 322
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF----NYLLKSLKKPEEV 415
PN TYN+LI LC + R++ EM + +P+ +T+ +YL K+ + ++
Sbjct: 323 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQ--IPDLVTYRTLSDYLCKN-RHLDKA 379
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
+L+ +E + Y IL + R + + KG+ P+ +Y +MIHG
Sbjct: 380 MALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 439
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG 518
L +G L +A F EM G P ND L RG
Sbjct: 440 LCKQGLLAEASKLFSEMNKNGCSP--------NDCTYNLITRG 474
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 169/384 (44%), Gaps = 58/384 (15%)
Query: 152 YSPGSNV-FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
+ P S V F +L + + + + ++ + +M PD+ T IL+N + +
Sbjct: 576 HPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY---TLNILINSFCHLRRL 632
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
A V + + G D+ + L+ LC+ ++ DI T N ++
Sbjct: 633 GYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISP------------DIFTYNSLI 680
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ C L +++ SK P+ V ++T V+AL K+G + A + M ++G +
Sbjct: 681 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 740
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDVVT ++D C + + EA++V M ++GC+PNV +YN LI C+I+RM+
Sbjct: 741 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 800
Query: 385 LDEMEQK-------------NGSC--------------------LPNEITFNYLLKSLKK 411
L++M + +G C +P+ +T+ LL L K
Sbjct: 801 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 860
Query: 412 PE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
E +L+ +E + YN+ + + R + + KG+ PD R+
Sbjct: 861 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRT 920
Query: 469 YTVMIHGLYDKGRLEDALSYFHEM 492
Y +MIHGL +G L++A F +M
Sbjct: 921 YNIMIHGLCKRGLLDEANKLFRKM 944
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 114/246 (46%), Gaps = 10/246 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P VF+ ++D L + V D M PD+V TY L++ + ++EA
Sbjct: 706 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVV---TYTALMDGHCLRSEMDEA 762
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
+ VFD G + ++ ++ L+ C+ + ++ A E + D T N +++G
Sbjct: 763 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 822
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +G + A + +++ S PD VTY ++ L K L A+ L +A+ D
Sbjct: 823 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 882
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
++ N ID +C + A ++ + ++G P+V TYN +I LCK ++ +
Sbjct: 883 ILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFR 942
Query: 387 EMEQKN 392
+M++ +
Sbjct: 943 KMDEND 948
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 9/238 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + A++D E ++VFD M + N ++Y IL+N Y +++A+G+
Sbjct: 741 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 800
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWC 268
++ G + D + L+ LC ++ A F E G D+ T I+L+ C
Sbjct: 801 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH-EMVASGQIPDLVTYRILLDYLC 859
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
++ EA K I S + D + Y ++ + + G+L A LF + KG +PDV
Sbjct: 860 KNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVR 919
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY---NSLIKHLCKIKRMETVYE 383
T N +I LC + + EA ++ R+M N T+ SLI + ++ VY
Sbjct: 920 TYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQKSLIYQKIMLPEIDLVYS 977
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 13/216 (6%)
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
S ++ TF + L AL F M K P V N ++ ++ K L + R
Sbjct: 10 SSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSR 69
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-- 409
+M + G P+V T +I LC + R++ + L ++ + P+ TF L++ L
Sbjct: 70 QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQ--PDATTFTTLIRGLCV 127
Query: 410 -KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK----VRHTWEEMEKKGMGP 464
K E + ++M G + + TY + +N C+D+ + + EM KG+ P
Sbjct: 128 EGKIGEALHLFDKMIGEGFQPNVVTYGTL----INGLCKDRQVTEAFNIFSEMITKGISP 183
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ +Y +IHGL + + +EM ++P+
Sbjct: 184 NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPD 219
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 181/373 (48%), Gaps = 22/373 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKTYGILLNRYAAAHMVEEA 207
P +N I+D + E ++ + +PD V TY L+N A VE A
Sbjct: 289 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQV---TYCSLINGLCAEGDVERA 345
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNG 266
+ +F+ + G D+ + +L+ LC + A E + DI+T NI++NG
Sbjct: 346 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +GN+ +A D I PD T+ T ++ K+ KL +AL+L + MWE G PD
Sbjct: 406 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 465
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+T N +++ LC ++ E E +EM +GC PN TYN LI++ C+ +ME + +
Sbjct: 466 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 525
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLY-- 441
+M Q+ P+ ++FN L+ + E + +++E G + DT+N ++ +
Sbjct: 526 KMSQEG--LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 583
Query: 442 -VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+N +K+ ++EM KG D +Y V+I G ++ A + EM KG +P
Sbjct: 584 KLNMHMAEKI---FDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPS 640
Query: 501 PRT-GILVNDMNI 512
T G ++N + +
Sbjct: 641 MSTFGRVINSLTV 653
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 154/351 (43%), Gaps = 49/351 (13%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
+N + L A R E +++ D M PD+V TY L+ M +EA+ R
Sbjct: 225 YNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVV---TYNTLIRGLCKKSMPQEAMHYLRR 281
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
G L D +F Y N I++G+C + V
Sbjct: 282 MMNQGCLPD-----------------------------DFTY-----NTIIDGYCKISMV 307
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA KD + PD VTY + +N L +G + AL LF KG KPD+V N +
Sbjct: 308 QEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSL 367
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
+ LC + I AL+V+ EM GC P++ TYN +I LCK+ + +++ K
Sbjct: 368 VKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG- 426
Query: 394 SCLPNEITFNYLL----KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
LP+ TFN L+ K LK + V ERM G T TYN +L ++
Sbjct: 427 -YLPDVFTFNTLIDGYCKRLKLDSALQLV-ERMWEYGIAPDTITYNSVLNGLCKAGKVNE 484
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
V T++EM KG P+ +Y ++I ++E+A +M +G+ P+
Sbjct: 485 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 535
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 162/383 (42%), Gaps = 43/383 (11%)
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKN 251
++ YA H +A +FD+ +L+AF +L LC+ V E + +
Sbjct: 158 VVCGLYAHGH-THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR 216
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
++ T NI + G C G + EA R D +++ PD VTY T + L KK A
Sbjct: 217 GMSINLFTYNIWIRGLCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSMPQEA 275
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALC----------------FKKRIPE---------- 345
+ + M +G PD T N IID C FK +P+
Sbjct: 276 MHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 335
Query: 346 ---------ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
ALE+ E + +G P++ YNSL+K LC + + ++EM ++ C
Sbjct: 336 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG--CH 393
Query: 397 PNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
P+ T+N ++ L K + V+ G T+N ++ Y D
Sbjct: 394 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 453
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
E M + G+ PD +Y +++GL G++ + F EM LKG P P T ++ + +
Sbjct: 454 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 513
Query: 514 LKERGEQGKKVIKLTSLGLKGNA 536
+ E K ++K++ GL +A
Sbjct: 514 SNKMEEASKVIVKMSQEGLHPDA 536
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 139/314 (44%), Gaps = 11/314 (3%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK-HVEVAETFFESE 249
Y + YA A + +A+ F+R F A+ ++ L H + + +
Sbjct: 54 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
D+ T I L +C+ + A R ++++ +V Y T V L G
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALR----LLRALPHRGAVAYCTVVCGLYAHGHTH 169
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A +LF M P++ N ++ ALC + + EA +L ++ RG N+ TYN I
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 229
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNG 426
+ LC+ R+ +D M +P+ +T+N L++ L K P+E L RM G
Sbjct: 230 RGLCEAGRLPEAVRLVDGMR---AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 286
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
C TYN I+ Y + ++ KG PDQ +Y +I+GL +G +E AL
Sbjct: 287 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 346
Query: 487 SYFHEMRLKGMVPE 500
F+E + KG+ P+
Sbjct: 347 ELFNEAQAKGIKPD 360
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + +N++L+ L +A + E+ + F EM P N TY IL+ + ++ +EE
Sbjct: 463 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP---NPITYNILIENFCRSNKMEE 519
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILN 265
A V + + G D +F L+ CR +E A F+ E+ + T N ++
Sbjct: 520 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 579
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+ N++ A++ + +++ DS TY ++ K + A M +KG P
Sbjct: 580 AFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 639
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
+ T +I++L R+ +A+ ++ M G +P V
Sbjct: 640 SMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 677
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 197/475 (41%), Gaps = 90/475 (18%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVS--REGDYSPGSNVFNAILDVL 166
IE A+ + ++ D +V + + D + A+ F+ +S R G + + NA+LDV
Sbjct: 12 IEAAVGRLRREISTDAVVKIFQCLK-DADLAWELFQCLSSPRFG-FQHSVHTGNALLDVF 69
Query: 167 GRARRFVELIQVFDE------MPDLVNEKTYGILLNRYAAAHMVEEAIGV---------- 210
R +R E + +PD+ +T+ +L+ Y A EEA V
Sbjct: 70 ARTKRHREAGNLLKNELATTFLPDV---ETWNVLITGYCLAREPEEAFAVIREMEEDYGV 126
Query: 211 --------------------------FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
F+ G D+ + ++ WL + K ++ A
Sbjct: 127 APSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVA 186
Query: 245 FFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
E N I T N +LNG C +G + EA + I+ + C PD VTY + ++ L
Sbjct: 187 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 246
Query: 304 KK-----------------------------------GKLGTALRLFQAMWEKGRKPDVV 328
K+ GK+ A +++ M +G PDVV
Sbjct: 247 KEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVV 306
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T + +ID LC RI A+ + + M+ RG PN Y++LI LCK ++M+ E L +M
Sbjct: 307 TLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 366
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILKLYVNWD 445
K C P+ IT+N L+ L K +V + M GCK TYN+++ +
Sbjct: 367 --KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAG 424
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D +++M P+ +Y +I GL + +L A YF M+ +G P+
Sbjct: 425 NTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPD 479
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 163/352 (46%), Gaps = 15/352 (4%)
Query: 157 NVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
+ + AI+D L + ++ + + + +++ P + TY LLN +EEAI +
Sbjct: 166 HTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIA---TYNALLNGLCKMGRLEEAIDL 222
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCV 269
+ + G D+ + +L+ L + K E + F E D ++ G
Sbjct: 223 LRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQ 282
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + +A +K + C PD VT +T ++ L K G++G A+R+F++M +G P+ V
Sbjct: 283 AGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVV 342
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ +I LC +++ ALE+L +MK C P+ TYN LI LCK +E + DEM
Sbjct: 343 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 402
Query: 390 QKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ C P+ T+N L+ K + V + M + C + TY ++
Sbjct: 403 E--AGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQ 460
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
K ++ M+++G PD Y+ ++ GL G+LE F EM G+
Sbjct: 461 LTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA 512
>gi|357142780|ref|XP_003572691.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 193/419 (46%), Gaps = 20/419 (4%)
Query: 93 NVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDY 152
+VQ+++++ + G + T +++ +++++ DW++A F+W G+Y
Sbjct: 64 SVQDLVQSLGIGCPG----------IQPTSNIVDGLLSKFGDDWKSALGLFQWAQSSGNY 113
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGV 210
+ + ++D+LG+ R+ ++ + +M LV + + R A A ++A+ +
Sbjct: 114 KHTAYACSRMIDLLGKMRQIDQMWDLLSDMHCRGLVTVEAAATSIRRLAGARRWKDAVLL 173
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
FD+ + G + LL LC+ K VEVA F D T NI ++GWC
Sbjct: 174 FDKLGDMGLERNTETMNVLLDALCKEKKVEVARKVFLVLSPHIQPDAYTFNIFVHGWCSA 233
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
+ EA +++ P +TY T + A K+ + +M +G P+V+T
Sbjct: 234 RRIDEAMWTIEEMKAQGFPPSVITYTTVLEAYCKQHNFRMVYEILDSMSSEGCHPNVITY 293
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
I+ +L EAL V MK+ GC P+ YNSLI L K + +
Sbjct: 294 TMIMTSLAKCHMFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKAGHLSEASQVFQVEMP 353
Query: 391 KNGSCLPNEI-TFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
NG +P + T+N ++ E+ VL+ ME CK TY +L+L+++
Sbjct: 354 MNG--VPRSLATYNTMISVFCYKDLDEDALSVLKEMETQSCKPDLQTYRPLLRLFLSRRG 411
Query: 447 E-DKVRHTWEE-MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ D VR+ E M K +G D +YT++IHGL G + A F EM +VP RT
Sbjct: 412 QDDTVRNLLNELMNKHSLGLDLDTYTLLIHGLCRVGETDWAYRLFDEMVGSEIVPRYRT 470
>gi|359487102|ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 390
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 176/374 (47%), Gaps = 54/374 (14%)
Query: 132 YRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTY 191
Y DW+ A FF WV + ++ ++ +N ++D+LG+ F DL+
Sbjct: 64 YANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEF-----------DLI----- 107
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
+L+ R A D A+ N + + +K A E
Sbjct: 108 WVLIQRMKA---------------------DPVAYPNHVTFRFVFKRYAAAHLVEE---- 142
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
IL GW +G + + FW+++ + +Y+ +++ K GK A
Sbjct: 143 -----------ILRGWFKMGWWKKCREFWEEMDRRGVCKSLYSYSIYMDIQCKSGKPWRA 191
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++L++ M +KG + DVV N +I A+ + + ++ V REMK GC PNV TYN++IK
Sbjct: 192 VKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKL 251
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMST 431
LC+ R+ Y D+M +K + PN IT++ ++KP+++ +RM +G +
Sbjct: 252 LCENGRIREAYGVFDQMREKGYA--PNVITYHCFFGCIEKPKQILRTFDRMINSGVRPRM 309
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
DTY +++K + W V W++ME++G PD +Y +I L KG ++ A Y E
Sbjct: 310 DTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEE 369
Query: 492 MRLKGMVPEPRTGI 505
M KG+ +PR +
Sbjct: 370 MLAKGLSAKPRVDL 383
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 183/454 (40%), Gaps = 84/454 (18%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNE 188
D + A FF W + + Y N +L R ++ E +F PD +
Sbjct: 111 DLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSI-- 168
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY L+N + A ++A + D ++ G + + + ++ LC V+ A +
Sbjct: 169 -TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRD 227
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ + T I+++ C + +A +D+I++ C P+ VTY T +N K G +
Sbjct: 228 MQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNM 287
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A+ LF M E PDV T N +ID C ++R + ++L+EM GC PN TYN+L
Sbjct: 288 DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTL 347
Query: 369 IKHL-----------------------------------CKIKRMETVYEYLDEMEQKNG 393
+ L CK+ +++ YE M +
Sbjct: 348 MDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG- 406
Query: 394 SCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
CLP+ T+N ++ + ++ +LERM GC TYN I+ D+
Sbjct: 407 -CLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 465
Query: 451 RHTWE-----------------------------------EMEKKGMGPDQRSYTVMIHG 475
+E EME+ G PD +YT++IHG
Sbjct: 466 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 525
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
+L+ +L++F EM KG VP T +V D
Sbjct: 526 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVID 559
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 174/359 (48%), Gaps = 11/359 (3%)
Query: 151 DYSPGSNVFNAILDV---LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
D P FN ++D+ +G+ EL Q+ + L + TY I+++ A+ +++A
Sbjct: 371 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 430
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+ +R E G D+ + +++ LC+ V+ A +E +N GY D+ T + +++
Sbjct: 431 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNG-GYFLDVVTCSTLID 489
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C + +A++ +++ ++ PD V Y ++ K +L +L F M +KG P
Sbjct: 490 GLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVP 549
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
V+T + +ID LC R+ + +L+ M RG P+ Y S+I LCK + YE
Sbjct: 550 TVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELY 609
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
M+Q C P +T+N L+ L K +E +LE ME +GC T TYN + +
Sbjct: 610 KLMKQTG--CAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFW 667
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
DK ++ M+ +G P Y++++ L + +++ A+ + E G +P
Sbjct: 668 KSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDP 726
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 160/339 (47%), Gaps = 16/339 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+ AY F+ ++ G P +N ++ RA R + Q+ + M PD+V T
Sbjct: 393 DLAYELFQLMTDRGCL-PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV---T 448
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESE 249
Y +++ A V+EA V++ + G D+ L+ LC+ + ++ AE E E
Sbjct: 449 YNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREME 508
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+N D+ I+++G+C + ++ F+ +++ C P +TY+ ++ L K ++
Sbjct: 509 RNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVR 568
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
L + M E+G PD + +ID LC EA E+ + MK GC P V TYN L+
Sbjct: 569 DGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLV 628
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLERMERNG 426
LCK+ R++ L+ ME + CLP+ +T+N + K E + + M+ G
Sbjct: 629 DKLCKVSRLDEAIHLLEVME--SDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRG 686
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
C + Y+++L V + D+ WEE + G D
Sbjct: 687 CSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 168/366 (45%), Gaps = 25/366 (6%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E +P +N +++ + E + +F++M PD+ TY IL++ Y
Sbjct: 264 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVF---TYNILIDGYCKQE 320
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIK--- 258
++ + ++G + + L+ L + K+++ F + D K
Sbjct: 321 RPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDA----FNLAQMMLRRDCKPSH 376
Query: 259 -TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T N++++ +C +G + A ++ + C PD TY ++ + ++ A +L +
Sbjct: 377 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 436
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M E G PDVVT N I+ LC ++ EA EV ++N G +V T ++LI LCK +R
Sbjct: 437 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRR 496
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTY 434
++ + L EME +NGS P+ + + L+ K +++ L M GC + TY
Sbjct: 497 LDDAEKLLREME-RNGS-APDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 554
Query: 435 NVIL-KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
++++ KL + D + M ++G+ PD YT +I GL ++A + M+
Sbjct: 555 SIVIDKLCKSARVRDGC-MLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMK 613
Query: 494 LKGMVP 499
G P
Sbjct: 614 QTGCAP 619
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 8/229 (3%)
Query: 302 LTKKGKLGTALRLFQ-AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L + L A++ F + G K TCNC++ A KK+ EA ++ + + C P
Sbjct: 106 LQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSP 165
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL- 419
+ TY++LI CK + + Y LDEME++ +P+ +N ++K L V L
Sbjct: 166 DSITYSTLINGFCKARDFQQAYRLLDEMEKRG--IVPHNAVYNTIIKGLCDNGRVDSALV 223
Query: 420 --ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
M+RN C S TY +++ E+M + G P+ +Y +I+G
Sbjct: 224 HYRDMQRN-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 282
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK 526
G +++A+ F++M P+ T ++ D K +ER + G K+++
Sbjct: 283 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCK-QERPQDGAKLLQ 330
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 196/420 (46%), Gaps = 23/420 (5%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
E+E +L +++ V+ R+ A+ FF W SR G ++ S + +LD+LG
Sbjct: 13 ELESSLFSLSPSISKTTFFQVL-RFIASPPKAFEFFNWASRNG-FAHDSRSYFMMLDILG 70
Query: 168 R------ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
R AR F+ I+ + ++ LL Y A + EAI +F K G
Sbjct: 71 RNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSP 130
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRF 279
+ F +LLL L + +A + F+ +G D T NI++ G+C V E RF
Sbjct: 131 SVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRF 190
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR--KPDVVTCNCIIDAL 337
+K++ + CEPD VTY T V+ L + GK+ A + + M +K + PDVVT ++
Sbjct: 191 FKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGY 250
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C K+ I EAL V EM +RG PN TYN+LIK LC++++ + + E L G +P
Sbjct: 251 CMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGF-VP 309
Query: 398 NEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILK-LYVNWDCE------ 447
+ T+N L+ + +E + ++M+ + + TY+V+++ L D E
Sbjct: 310 DTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLF 369
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
DK+ + G P +Y + L G+ A F ++ KG P L+
Sbjct: 370 DKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKTLI 429
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 79/196 (40%), Gaps = 10/196 (5%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAI 208
+ P + +N +++ A F E +++F +M +L + TY +L+ E A
Sbjct: 307 FVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAE 366
Query: 209 GVFDRRKEFGEL--DD-----LSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
+FD+ + L DD ++A+ + +LC+ AE F + D +
Sbjct: 367 QLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYK 426
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++ G C G + +++ PD TY +N +KG+ A + + M +
Sbjct: 427 TLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKS 486
Query: 322 GRKPDVVTCNCIIDAL 337
P + I+ L
Sbjct: 487 SYLPKTSVFHSILSEL 502
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 194/418 (46%), Gaps = 78/418 (18%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM----------PDLVNEKTYGILLNRYAAAHM 203
P FN+ + L RA + +E ++F +M P++V T+ ++L + M
Sbjct: 252 PDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVV---TFNLMLKGFCKHGM 308
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKNEFGYDI 257
+ +A G+ + K+ G D L + L+ L R + A + E N + Y+I
Sbjct: 309 MGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNI 368
Query: 258 K------------------------------TMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
+ +L+G+C G V+EAK ++I++
Sbjct: 369 MMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNG 428
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
C+P++ T T +++L K+G+ A + Q M EK +PD VTCN +++ LC + +A
Sbjct: 429 CQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKAS 488
Query: 348 EVLREMKNRG----------------------CLPNVTTYNSLIKHLCKIKRMETVYEYL 385
E++ EM G CLP+ TY +LI LCK+ R+E +
Sbjct: 489 EIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKF 548
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYN-VILKLY 441
EM KN P+ +T++ + S K ++ VL+ MERNGC + TYN +IL L
Sbjct: 549 IEMLAKN--LRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLG 606
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
N + + +EM++KG+ PD +Y +I L + G+ +DA+S HEM KG+ P
Sbjct: 607 SNNQIFE-IYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISP 663
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 19/370 (5%)
Query: 142 FFKWVSRE---GDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
F W+ + +P + FN ++ L +R F +Q+F++MP NE T GIL+
Sbjct: 133 FVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILV 192
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
A +V++A+ + + + + + L+ CR + AE E NE G
Sbjct: 193 RGLCRAGLVKQALELVNNNNSC-RIANRVVYNTLVSRFCREEMNNEAERLVE-RMNELGV 250
Query: 256 --DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK----CEPDSVTYATFVNALTKKGKLG 309
D+ T N ++ C G V EA R ++D+ P+ VT+ + K G +G
Sbjct: 251 LPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMG 310
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A L + M + G + N + L + EA VL EM +G PN TYN ++
Sbjct: 311 DARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMM 370
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNG 426
LC+ + +D M +NG P+ + ++ LL S K E VL M RNG
Sbjct: 371 DGLCRNHMLSDARGLMDLM-MRNG-VYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNG 428
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
C+ +T T N +L + ++M +K PD + ++++GL G L+ A
Sbjct: 429 CQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKAS 488
Query: 487 SYFHEMRLKG 496
EM G
Sbjct: 489 EIVSEMWTNG 498
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 159/369 (43%), Gaps = 40/369 (10%)
Query: 154 PGSNVFNAILDVLGR------ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P + +N ++D L R AR ++L+ PD V Y LL+ Y + V EA
Sbjct: 361 PNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTV---AYSTLLHGYCSRGKVFEA 417
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
V G + LL L + AE + + NE Y D T NI++N
Sbjct: 418 KSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQ-KMNEKCYQPDTVTCNIVVN 476
Query: 266 GWCVLGNVYEAKRFWKDIIK----------------------SKCEPDSVTYATFVNALT 303
G C G + +A ++ S C PD +TY T +N L
Sbjct: 477 GLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLC 536
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K G+L A + F M K +PD VT + I + C + +I A VL++M+ GC +
Sbjct: 537 KVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQ 596
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLE 420
TYN+LI L ++ +Y DEM++K S P+ T+N ++ L K ++ +L
Sbjct: 597 TYNALILGLGSNNQIFEIYGLKDEMKEKGIS--PDICTYNNIITCLCEGGKAKDAISLLH 654
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
M G + ++ +++K + + + KV E+ G + Y++M + L G
Sbjct: 655 EMLDKGISPNVSSFKILIKAF-SKSSDFKVACELFEVALNICGRKEALYSLMFNELLAGG 713
Query: 481 RLEDALSYF 489
+L +A F
Sbjct: 714 QLSEAKELF 722
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 4/243 (1%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D T ++NG C +G + EAK+ + +++ PDSVTY TF+ + K+GK+ +A R+
Sbjct: 524 DGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVL 583
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ M G + T N +I L +I E + EMK +G P++ TYN++I LC+
Sbjct: 584 KDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEG 643
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME--RNGCKMSTDT 433
+ + L EM K S PN +F L+K+ K + E E N C
Sbjct: 644 GKAKDAISLLHEMLDKGIS--PNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEAL 701
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y+++ + + + +E + + Y +I L RL DA S +++
Sbjct: 702 YSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLI 761
Query: 494 LKG 496
KG
Sbjct: 762 DKG 764
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 15/282 (5%)
Query: 233 LCRYKHVEVAETFFESEKNEF---GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
L + HV+ A T F+S + +F + N++L + D++ ++
Sbjct: 88 LAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVA 147
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P + T+ +++L + AL+LF+ M +KG P+ T ++ LC + +ALE+
Sbjct: 148 PQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALEL 207
Query: 350 LREMKNRGC-LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ N C + N YN+L+ C+ + M E L E + G LP+ +TFN + +
Sbjct: 208 VNN--NNSCRIANRVVYNTLVSRFCR-EEMNNEAERLVERMNELG-VLPDVVTFNSRISA 263
Query: 409 L---KKPEEVPWVLERMERNG----CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L K E + M+ + + + T+N++LK + R E M+K G
Sbjct: 264 LCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVG 323
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
Y + + GL G L +A EM KG+ P T
Sbjct: 324 NFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYT 365
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
P T+N LI LC+ + + + ++M QK C PNE T L++ L + V L
Sbjct: 148 PQTYTFNLLIHSLCESRAFDHALQLFEKMPQK--GCCPNEFTLGILVRGLCRAGLVKQAL 205
Query: 420 ERMERN-GCKMSTDT-YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
E + N C+++ YN ++ + + ++ E M + G+ PD ++ I L
Sbjct: 206 ELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALC 265
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
G++ +A F +M++ + PR ++ ++ +K
Sbjct: 266 RAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLK 301
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 10/223 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+A+ K + R G S +NA++ LG + E+ + DEM PD+ T
Sbjct: 577 SSAFRVLKDMERNG-CSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDIC---T 632
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y ++ ++AI + + G ++S+F+ L+ + +VA FE
Sbjct: 633 YNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVAL 692
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
N G +++ N G + EAK ++ + + Y + L + +L
Sbjct: 693 NICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLAD 752
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
A L + +KG D + +ID L + +A E+ + M
Sbjct: 753 ANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRM 795
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 206/408 (50%), Gaps = 23/408 (5%)
Query: 120 LTDDLIVNVINRY-RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
+T ++I+N + R R D A F +S G + P + + +L L A+R+ ++ ++
Sbjct: 216 VTYNVIINGMCREGRVD--DAREFLNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEEL 272
Query: 179 FDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
F EM + + NE T+ +L+ + MVE AI V ++ G + + ++ +C+
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMN--IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
V+ A F + +G T++ +L G C +AK K++++ C P+ V
Sbjct: 333 QGRVDDAFQFLNN-MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ TF+ L +KG + A L + M E G + ++VT N +++ C + R+ ALE+ M
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP- 412
C PN TY +L+ LC +R++ E L EM QK+ C PN +TFN L+ +
Sbjct: 452 P---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD--CAPNVVTFNVLVSFFCQKG 506
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC-EDKVRHTWEEMEKKGMGPDQRSY 469
+E ++E+M +GC + TYN +L N DC ++ + G+ PD +Y
Sbjct: 507 LMDEAIELVEQMMEHGCTPNLITYNTLLDGITN-DCNSEEALELLHGLVSNGVSPDIVTY 565
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517
+ +I L + R+E+A+ FH ++ GM P+ ++ N + + L +R
Sbjct: 566 SSIIGVLSREDRVEEAIKMFHIVQDLGMRPK---AVIYNKILLALCKR 610
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 149/339 (43%), Gaps = 10/339 (2%)
Query: 164 DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
D L A R V+ E PD+ L+ +A V + G D+
Sbjct: 57 DDLAEAARLVDRATSRGEAPDVY---LCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDV 113
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
A+ L+ CRY ++ A S D T I+ G C G V EA D+
Sbjct: 114 FAYNTLVAGYCRYGQLDAARRLIASMP--VAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+ C+P VTY + A+ K G A+ + M KG P++VT N II+ +C + R+
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
+A E L + + G P+ +Y +++K LC KR E V E EM +KN C+PNE+TF+
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN--CMPNEVTFD 289
Query: 404 YLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
L++ + E VLE+M +GC +T N+++ D M
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
G PD SYT ++ GL R EDA EM K P
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 10/278 (3%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYG 192
WE A K + R+ + P FN + +L G + LI+ E VN TY
Sbjct: 371 WEDAKELLKEMVRK-NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYN 429
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
L+N + V+ A+ +F + + LL LC + ++ A E E +
Sbjct: 430 ALVNGFCVQGRVDSALELF---YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK 486
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ ++ T N++++ +C G + EA + +++ C P+ +TY T ++ +T A
Sbjct: 487 DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEA 546
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L L + G PD+VT + II L + R+ EA+++ +++ G P YN ++
Sbjct: 547 LELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLA 606
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
LCK + ++ M NG C+PNE+T+ L++ L
Sbjct: 607 LCKRCNTDGAIDFFAYM-VSNG-CMPNELTYITLIEGL 642
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 8/202 (3%)
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L + L A RL +G PDV C +I LC + R +A VLR + G +
Sbjct: 53 LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD 112
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V YN+L+ C+ +++ + M P+ T+ +++ L + E +
Sbjct: 113 VFAYNTLVAGYCRYGQLDAARRLIASMPVA-----PDAYTYTPIIRGLCDRGRVGEALSL 167
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L+ M GC+ S TY V+L+ + +EM KG P+ +Y V+I+G+
Sbjct: 168 LDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCR 227
Query: 479 KGRLEDALSYFHEMRLKGMVPE 500
+GR++DA + + + G P+
Sbjct: 228 EGRVDDAREFLNRLSSYGFQPD 249
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 10/213 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + + +L L A R ++ EM P++V T+ +L++ + +++EA
Sbjct: 455 PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVV---TFNVLVSFFCQKGLMDEA 511
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNG 266
I + ++ E G +L + LL + + E A E N DI T + I+
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 571
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
V EA + + + P +V Y + AL K+ A+ F M G P+
Sbjct: 572 LSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPN 631
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+T +I+ L + + E ++LRE+ +RG L
Sbjct: 632 ELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 180/378 (47%), Gaps = 14/378 (3%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK-----TY 191
++A + + + + G Y P + +++ L +A + E + M ++ + +Y
Sbjct: 66 DSALSLLETMIKRG-YCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSY 124
Query: 192 GILLNRYAAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
LLN A V +A +F E + D+ ++ L+ C+ + AE ++
Sbjct: 125 NSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 184
Query: 251 N-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ ++ T N LNG G + +A+ ++++I + C PD +TY+T ++ + K
Sbjct: 185 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHD 244
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A LF+AM +G +P+ VT NC++ LC + + EA E+ R+M RGC P+ TY +L+
Sbjct: 245 QAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLL 304
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
C + ++E E DEM K P+ + +N LLK KP E + + M
Sbjct: 305 YGFCNVGKIEQAVEVFDEMVSKGHD--PDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE 362
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLEDA 485
CK T ++N+++ D +E ME+ G PD +Y +I GL + RL +A
Sbjct: 363 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 422
Query: 486 LSYFHEMRLKGMVPEPRT 503
+ F E+ + P+P
Sbjct: 423 MKVFKEIDRLKLSPDPHA 440
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 18/292 (6%)
Query: 225 AFQNLLLWLCRYKHVEVA----ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
A+ L LC+ +E A T ES + T + ++ C G V A
Sbjct: 13 AWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLL 72
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE--KGRKPDVVTCNCIIDALC 338
+ +IK PD T++ +N L K K+ A Q M R + N ++++LC
Sbjct: 73 ETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLC 132
Query: 339 FKKRIPEALEVLREM-KNRGCLPNVTTYNSLIKHLCKIK---RMETVYEYLDEMEQKNGS 394
K++ +A + M R +P+V +Y+ LI CKI R E +Y+ + ++ +
Sbjct: 133 KAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDL-----N 187
Query: 395 CLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
C+PN T+N L L + + V E M GC TY+ ++ + D+
Sbjct: 188 CVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAH 247
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+E M +G P+ +Y ++HGL + + ++A F +M +G P+ T
Sbjct: 248 ELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVT 299
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 11/228 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP ++ ++ AR+ + ++F+ M P+ V TY LL+ +E
Sbjct: 224 SPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAV---TYNCLLHGLCKESKPDE 280
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F + E G D + LL C +E A E F E D+ N +L
Sbjct: 281 AHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLK 340
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM-WEKGRK 324
G+ G EA++ ++ ++ +C+PD+V++ ++ L+K +L A+ +F+ M + G
Sbjct: 341 GFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCS 400
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
PD+VT N +I LC ++R+ EA++V +E+ P+ +N L++ +
Sbjct: 401 PDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 11/262 (4%)
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV---TCNCIIDALCFK 340
++SK ++V + F+ L K GK+ A + M E TC+ +I LC
Sbjct: 3 VESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKA 62
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
R+ AL +L M RG P++ T++ LI LCK +++ E+L M + + +
Sbjct: 63 GRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCF 122
Query: 401 TFNYLLKSLKKPEEVPWVLE----RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
++N LL SL K ++V + +Y++++ + D + +++
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLK 515
M P+ +Y ++GL KGR+ DA + EM G P+ T L++ L
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIH--GFSLA 240
Query: 516 ERGEQGKKVIK-LTSLGLKGNA 536
+ +Q ++ + + S G + NA
Sbjct: 241 RKHDQAHELFEAMISRGCRPNA 262
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 77/197 (39%), Gaps = 29/197 (14%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
EA F K V R D P + +L + + ++VFDEM PD+V
Sbjct: 280 EAHELFRKMVERGCD--PDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV---A 334
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y LL + A EA +F D + ++ L + K ++ A FE +
Sbjct: 335 YNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERME 394
Query: 251 NEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ G D+ T N ++ G C + EA + +K+I + K PD +
Sbjct: 395 QDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNV----------- 443
Query: 309 GTALRLFQAMWEKGRKP 325
L +AM+ G KP
Sbjct: 444 -----LLEAMYAAGHKP 455
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 175/363 (48%), Gaps = 16/363 (4%)
Query: 152 YSPGSNV-FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
+ P S V FN +L + + +++ + + ++M PD+ T IL+N + +
Sbjct: 62 HPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVY---TLNILINSFCHLNRP 118
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNII 263
A V + + G D + F L+ LC + A F+ E F ++ T +
Sbjct: 119 GFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTL 178
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+NG C +GN A R + + + C+PD V Y + +++L K ++ A LF M +G
Sbjct: 179 INGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGI 238
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD+ T +I +LC +L +M N +P+V +++++ LCK ++ ++
Sbjct: 239 SPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHD 298
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
+D M + PN +T+N L+ + +E V + M NG + +YN ++
Sbjct: 299 VVDMMIIRGVE--PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLING 356
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
Y DK + +EEM +K + P+ +Y ++HGL GRL+DA++ FHEM G +P+
Sbjct: 357 YCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPD 416
Query: 501 PRT 503
T
Sbjct: 417 LAT 419
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 182/393 (46%), Gaps = 21/393 (5%)
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------ 182
+NR F A++ + + G P + F ++ L + + + +FD+M
Sbjct: 115 LNRPGF----AFSVLAKILKLG-LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 169
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
P++V TYG L+N AI + ++ D+ + +++ LC+ + V A
Sbjct: 170 PNVV---TYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 226
Query: 243 ETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
F + DI T +++ C L +I SK PD V ++T V+A
Sbjct: 227 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 286
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K+GK+ A + M +G +P+VVT N ++D C + + EA++V M + G PN
Sbjct: 287 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 346
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V +YN+LI CKI+RM+ +EM QK +PN +T+N L+ L + ++ +
Sbjct: 347 VISYNTLINGYCKIQRMDKATYLFEEMCQK--ELIPNTVTYNTLMHGLCHVGRLQDAIAL 404
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
M +G TY ++L D+ + +E M PD + YT++I G+
Sbjct: 405 FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCR 464
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
G LE A F + KG+ P RT I++N +
Sbjct: 465 AGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 497
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 126/260 (48%), Gaps = 5/260 (1%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
+ + A F + G Y+P +N +++ + +R + +F+EM + N TY
Sbjct: 327 EMDEAVKVFDTMVHNG-YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTY 385
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EK 250
L++ +++AI +F G++ DL+ ++ LL +LC+ H++ A ++ E
Sbjct: 386 NTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEG 445
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ DI+ I+++G C G + A+ + ++ P+ TY +N L ++G L
Sbjct: 446 SNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDE 505
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A +LF M G PD T N I L K A+++L+EM RG +V+T L++
Sbjct: 506 ANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 565
Query: 371 HLCKIKRMETVYEYLDEMEQ 390
LC K ++V + L E Q
Sbjct: 566 MLCDDKLDQSVKQILSEFVQ 585
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 161/377 (42%), Gaps = 25/377 (6%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
+G+ P V+ +I+D L + R+ E +F +M PD+ TY L++
Sbjct: 200 QGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIF---TYTSLIHSLCNLC 256
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE------SEKNEFGYD 256
+ + ++ + D+ F ++ LC+ + A + E N
Sbjct: 257 EWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPN----- 311
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ T N +++G C+ + EA + + ++ + P+ ++Y T +N K ++ A LF+
Sbjct: 312 VVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFE 371
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M +K P+ VT N ++ LC R+ +A+ + EM G +P++ TY L+ +LCK
Sbjct: 372 EMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKS 431
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDT 433
++ L +E N P+ + ++ + + E+ + + G + + T
Sbjct: 432 HLDEAMALLKTIEGSNMD--PDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRT 489
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y +++ D+ + EM+ G PD +Y + GL A+ EM
Sbjct: 490 YTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 549
Query: 494 LKGMVPEPRTGILVNDM 510
+G + T L+ +M
Sbjct: 550 ARGFSADVSTTTLLVEM 566
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 195/430 (45%), Gaps = 47/430 (10%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + E + + D+M PDLV TYG ++N
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV---TYGTVVNGLCKRG 237
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMN 261
++ A+ + ++ + ++ F ++ LC+Y+HVEVA + F E E ++ T N
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++N C G +A R ++++ K P+ VT+ ++A K+GKL A +L + M ++
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
PD +T N +I+ C R+ EA ++ + M ++ CLPN+ TYN+LI CK KR+E
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
E EM Q+ + N +T+ +++ + + V ++M N TY+++L
Sbjct: 418 VELFREMSQR--GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 439 KLYVNWDCED--------------------------------KVRHTWEEMEKKGMGPDQ 466
++ D KV W+ + PD
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDV 535
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK 526
+Y MI GL K L++A F +M+ G +P T + N++ +R + + +
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKE 595
Query: 527 LTSLGLKGNA 536
+ S G G+A
Sbjct: 596 MRSSGFVGDA 605
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 154/350 (44%), Gaps = 43/350 (12%)
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
LL+ A + E I + ++ + G DL + + CR + +A ++ +
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL-AKMMKL 147
Query: 254 GY--DIKTMNIILNGWC-----------------------------------VLGNVYEA 276
GY DI T++ +LNG+C + EA
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
+++ C+PD VTY T VN L K+G + AL L M K +VV N IID+
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
LC + + A+++ EM+ +G PNV TYNSLI LC R L M +K +
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN-- 325
Query: 397 PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
PN +TFN L+ + K E + E M + T TYN+++ + + D+ +
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ M K P+ ++Y +I+G R+ED + F EM +G+V T
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 38/255 (14%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
T+T +L++N + EA F VS+ D P +N +++ + +R + +++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSK--DCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 179 FDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
F EM + N TY ++ + A + A VF + D+ + LL LC
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 236 YKHVEVAETFF------ESEKNEFGY---------------------------DIKTMNI 262
Y ++ A F E E N F Y D+ T N
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNT 540
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++G C + EA ++ + + P+S TY T + A + + L + M G
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Query: 323 RKPDVVTCNCIIDAL 337
D T + + + L
Sbjct: 601 FVGDASTISLVTNML 615
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 181/373 (48%), Gaps = 22/373 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKTYGILLNRYAAAHMVEEA 207
P +N I+D + E ++ + +PD V TY L+N A VE A
Sbjct: 291 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQV---TYCSLINGLCAEGDVERA 347
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNG 266
+ +F+ + G D+ + +L+ LC + A E + DI+T NI++NG
Sbjct: 348 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 407
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +GN+ +A D I PD T+ T ++ K+ KL +AL+L + MWE G PD
Sbjct: 408 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 467
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+T N +++ LC ++ E E +EM +GC PN TYN LI++ C+ +ME + +
Sbjct: 468 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 527
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLY-- 441
+M Q+ P+ ++FN L+ + E + +++E G + DT+N ++ +
Sbjct: 528 KMSQEGLH--PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 585
Query: 442 -VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+N +K+ ++EM KG D +Y V+I G ++ A + EM KG +P
Sbjct: 586 KLNMHMAEKI---FDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPS 642
Query: 501 PRT-GILVNDMNI 512
T G ++N + +
Sbjct: 643 MSTFGRVINSLTV 655
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 151/344 (43%), Gaps = 49/344 (14%)
Query: 166 LGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
L A R E +++ D M PD+V TY L+ M +EA+ R G L
Sbjct: 234 LCEAGRLPEAVRLVDGMRAYAVPDVV---TYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 290
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D +F Y N I++G+C + V EA
Sbjct: 291 PD-----------------------------DFTY-----NTIIDGYCKISMVQEATELL 316
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
KD + PD VTY + +N L +G + AL LF KG KPD+V N ++ LC +
Sbjct: 317 KDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 376
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
I AL+V+ EM GC P++ TYN +I LCK+ + +++ K LP+
Sbjct: 377 GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK--GYLPDVF 434
Query: 401 TFNYLL----KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
TFN L+ K LK + V ERM G T TYN +L ++V T++E
Sbjct: 435 TFNTLIDGYCKRLKLDSALQLV-ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 493
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
M KG P+ +Y ++I ++E+A +M +G+ P+
Sbjct: 494 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 537
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 162/383 (42%), Gaps = 43/383 (11%)
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKN 251
++ YA H +A +FD+ +L+AF +L LC+ V E + +
Sbjct: 160 VVCGLYAHGH-THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR 218
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
++ T NI + G C G + EA R D +++ PD VTY T + L KK A
Sbjct: 219 GMSINLFTYNIWIRGLCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSMPQEA 277
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALC----------------FKKRIPE---------- 345
+ + M +G PD T N IID C FK +P+
Sbjct: 278 MHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 337
Query: 346 ---------ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
ALE+ E + +G P++ YNSL+K LC + + ++EM ++ C
Sbjct: 338 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE--GCH 395
Query: 397 PNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
P+ T+N ++ L K + V+ G T+N ++ Y D
Sbjct: 396 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 455
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
E M + G+ PD +Y +++GL G++ + F EM LKG P P T ++ + +
Sbjct: 456 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 515
Query: 514 LKERGEQGKKVIKLTSLGLKGNA 536
+ E K ++K++ GL +A
Sbjct: 516 SNKMEEASKVIVKMSQEGLHPDA 538
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 137/307 (44%), Gaps = 11/307 (3%)
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK-HVEVAETFFESEKNEFGYD 256
YA A + +A+ F+R F A+ ++ L H + + + D
Sbjct: 63 YARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPD 122
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ T I L +C+ + A R ++++ +V Y T V L G A +LF
Sbjct: 123 LHTHTIRLRSFCLTARPHIALR----LLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFD 178
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M P++ N ++ ALC + + EA +L ++ RG N+ TYN I+ LC+
Sbjct: 179 QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 238
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDT 433
R+ +D M +P+ +T+N L++ L K P+E L RM GC T
Sbjct: 239 RLPEAVRLVDGMR---AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 295
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
YN I+ Y + ++ KG PDQ +Y +I+GL +G +E AL F+E +
Sbjct: 296 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 355
Query: 494 LKGMVPE 500
KG+ P+
Sbjct: 356 AKGIKPD 362
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 12/230 (5%)
Query: 143 FKWVSREGDY--SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGIL 194
+ V R +Y +P + +N++L+ L +A + E+ + F EM P N TY IL
Sbjct: 453 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP---NPITYNIL 509
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEF 253
+ + ++ +EEA V + + G D +F L+ CR +E A F+ E+ +
Sbjct: 510 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 569
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
T N ++ + N++ A++ + +++ DS TY ++ K + A
Sbjct: 570 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 629
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
M +KG P + T +I++L R+ +A+ ++ M G +P V
Sbjct: 630 HLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 206/446 (46%), Gaps = 31/446 (6%)
Query: 107 GEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDY---SPGSNVFNAIL 163
GE+ + ++ L L I + FD F VS + D + V+N +L
Sbjct: 114 GEMRREGHEVGLGLVQSFIGSYARLQLFD-----DAFDLVSNQLDMFGVQANTEVYNHLL 168
Query: 164 DVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF 217
VL + L + EM PD+V T+ +++ A A+ + +
Sbjct: 169 TVLAEGSKIKLLESAYTEMSSQGIEPDVV---TFNTVIDALCRARQARTAVLMLEEMSSC 225
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK--TMNIILNGWCVLGNVYE 275
D + F L+ +E A ++ +E G T+N+++NG+C LG V +
Sbjct: 226 DVAPDETTFTTLMEGFVEEGSIEAA-LRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGD 284
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A + + I EPD VT++TFVN L + G + AL++ M ++G +PDV T + +I+
Sbjct: 285 ALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVIN 344
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
LC + EA ++ +M + GCLP+ TT+N+LI LC ++E + E+ K S
Sbjct: 345 CLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLS- 403
Query: 396 LPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
PN TFN L+ +L K P + E M+ +GC TYN+++ + K
Sbjct: 404 -PNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALD 462
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNI 512
+EME G +Y +I GL + R+E+A F +M + G+ R I N +
Sbjct: 463 LLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGI---GRNAITFNTLID 519
Query: 513 KL--KERGEQGKKVI-KLTSLGLKGN 535
L ER + +++ ++ S GL+ N
Sbjct: 520 GLCNAERIDDAAELVDQMISEGLQPN 545
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 155/324 (47%), Gaps = 18/324 (5%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
TY ++N +EEA G+ ++ + G L D + F L++ LC +E A + E
Sbjct: 338 TYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAREL 397
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
++ T NI++N C +G+ + A R ++++ S C PD VTY ++ L GKL
Sbjct: 398 TVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKL 457
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL L + M G VT N IID LC ++RI EA EV +M G N T+N+L
Sbjct: 458 AKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTL 517
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERN 425
I LC +R++ E +D+M + PN +T+N +L K + +L+ M N
Sbjct: 518 IDGLCNAERIDDAAELVDQMISE--GLQPNNVTYNSILTHYCKQGNISKAADILQTMTAN 575
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEE------MEKKGMGPDQRSYTVMIHGLYDK 479
G ++ TY + +N C K R T M KGM P ++Y +I L+
Sbjct: 576 GFEVDVVTYATL----INGLC--KARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRG 629
Query: 480 GRLEDALSYFHEMRLKGMVPEPRT 503
DALS F EM G P+ T
Sbjct: 630 NNGRDALSLFREMTEVGGPPDAFT 653
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 191/468 (40%), Gaps = 87/468 (18%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PD------ 184
E+AYT +S +G P FN ++D L RAR+ + + +EM PD
Sbjct: 181 ESAYT---EMSSQG-IEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTT 236
Query: 185 ----LVNEK----------------------TYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
V E T +L+N Y V +A+G + G
Sbjct: 237 LMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADG 296
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAK 277
D F + LC+ HV+ A E D+ T + ++N C G + EAK
Sbjct: 297 FEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAK 356
Query: 278 RFWKDIIKSKCEPDSVTYATFV-----------------------------------NAL 302
++ S C PD+ T+ T + NAL
Sbjct: 357 GIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINAL 416
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K G A+RLF+ M G PD VT N +ID LC ++ +AL++L+EM+ GC +
Sbjct: 417 CKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQST 476
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVL 419
TYN++I LCK +R+E E D+M+ N ITFN L+ L E + ++
Sbjct: 477 VTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIG--RNAITFNTLIDGLCNAERIDDAAELV 534
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
++M G + + TYN IL Y K + M G D +Y +I+GL
Sbjct: 535 DQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKA 594
Query: 480 GRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKL 527
R + AL MR+KGM P P+ V I+ RG G+ + L
Sbjct: 595 RRTQAALKLLRGMRMKGMKPTPKAYNPV----IQSLFRGNNGRDALSL 638
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 186/410 (45%), Gaps = 47/410 (11%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VN 187
R + D ++ W S++ ++ P S ++ +L LG+ F + +V EM +
Sbjct: 80 RRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIR 139
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFD-RRKEFG-ELD------------------------ 221
T+ IL+ YA + +EA+ V D +EFG +LD
Sbjct: 140 RGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVN 199
Query: 222 ----------DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCV 269
D++ F L+ LCR + A E E +G D KT ++ G+
Sbjct: 200 SRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMME-EMGSYGLSPDEKTFTTLMQGFIE 258
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
GN+ A R + ++ + C +VT V+ K+G++ L M +G +PD T
Sbjct: 259 EGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFT 318
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +++ LC + ALE+L M G P++ TYNSLI LCK+ +E E L++M
Sbjct: 319 FNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMI 378
Query: 390 QKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
++ S PN +T+N L+ +L K EE + + G T+N +++ +
Sbjct: 379 LRDFS--PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNN 436
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+EEM+ KG PD+ +Y ++I L +GRLE+ALS EM G
Sbjct: 437 HRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 178/379 (46%), Gaps = 20/379 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E +F +S EG + P FN++++ L R +++ D M PD+ T
Sbjct: 298 EEVLSFIDEMSNEG-FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIF---T 353
Query: 191 YGILLNRYAAAHMVEEAIGVFDRR--KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
Y L+ VEEA+ + ++ ++F + + L+ LC+ VE A
Sbjct: 354 YNSLIFGLCKLGEVEEAVEILNQMILRDFSP--NTVTYNTLISTLCKENQVEEATELARV 411
Query: 249 EKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
++ D+ T N ++ G C+ N A ++++ C PD TY +++L +G+
Sbjct: 412 LTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGR 471
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L AL L + M G +VVT N +ID C KRI EA E+ EM+ +G NV TYN+
Sbjct: 472 LEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNT 531
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMER 424
LI LCK +R+E + +D+M + P++ T+N LL + ++ +++ M
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLK--PDKFTYNSLLTYFCRAGDIKKAADIVQTMTS 589
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
NGC+ + TY ++ + ++ KGM ++Y +I L+ + R +
Sbjct: 590 NGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSE 649
Query: 485 ALSYFHEMRLKGMVPEPRT 503
A+ F EM KG P+ T
Sbjct: 650 AVRLFREMMEKGDPPDAVT 668
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 8/276 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILL 195
A F+ + +G + P +N ++D L R E + + EM N TY L+
Sbjct: 440 AMELFEEMKTKGCH-PDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLI 498
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FG 254
+ + +EEA +FD + G ++ + L+ LC+ + VE A + E
Sbjct: 499 DGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLK 558
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D T N +L +C G++ +A + + + CEPDSVTY T + L+K G++ A RL
Sbjct: 559 PDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRL 618
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+ + KG T N +I AL +KR EA+ + REM +G P+ TY + + LC
Sbjct: 619 LRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCS 678
Query: 375 -IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+ ++L EM K LP+ +F L + L
Sbjct: 679 GGGPIGEAVDFLVEMTDKG--FLPDFSSFLMLAEGL 712
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 122/283 (43%), Gaps = 20/283 (7%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
D + +LL W + + + +E + G D G+ +R +
Sbjct: 84 DEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKD--------------GSFGSMRRVLQ 129
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK-GRKPDVVTCNCIIDALCFK 340
++ + CE T+ + + K A+ + M E+ G K D T N +++ L
Sbjct: 130 EMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDG 189
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
++ V M +RG P+VTT+N LIK LC+ ++ ++EM S P+E
Sbjct: 190 NKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLS--PDEK 247
Query: 401 TFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
TF L++ + + L E+M GC S T NV++ Y ++V +EM
Sbjct: 248 TFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEM 307
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+G PD+ ++ +++GL G ++ AL M +G P+
Sbjct: 308 SNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPD 350
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 13/220 (5%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D+ TY +N L KL + M +G KPDV T N +I ALC +I A+ ++
Sbjct: 175 DAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMM 234
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
EM + G P+ T+ +L++ + M ++M C + +T N L+
Sbjct: 235 EEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVA--AGCPSSNVTVNVLVHGYC 292
Query: 411 KP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE-DKVRHTWEEME---KKGMG 463
K EEV ++ M G + T+N + VN C V+H E ++ ++G
Sbjct: 293 KEGRIEEVLSFIDEMSNEGFRPDRFTFNSL----VNGLCRIGHVKHALEILDVMLQEGFD 348
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
PD +Y +I GL G +E+A+ ++M L+ P T
Sbjct: 349 PDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVT 388
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EV 415
+P+ Y +++ L K ++ L EM K+ C TF L++S K E E
Sbjct: 102 VPSSVIYEEVLRKLGKDGSFGSMRRVLQEM--KHTGCEIRRGTFLILIESYAKFELFDEA 159
Query: 416 PWVLERMERN-GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
V++ ME G K+ TYN +L + V+ + V M +G+ PD ++ ++I
Sbjct: 160 VAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIK 219
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
L ++ A+ EM G+ P+ +T
Sbjct: 220 ALCRAHQIRPAILMMEEMGSYGLSPDEKT 248
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 173/377 (45%), Gaps = 16/377 (4%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGIL 194
A F+ + + G + P +N ++D L +A E ++ M + N TY +L
Sbjct: 99 AGMELFEELVKRG-HHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVL 157
Query: 195 LNRYAAAHMVEEAIGVFDR--RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN- 251
+N ++EA + RK L ++ + + L LC+ A S ++
Sbjct: 158 INGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDG 217
Query: 252 --EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
D T + +++G C G EA D+I P+ VTY VN L K K+
Sbjct: 218 SLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKME 275
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A + ++M +KG PDV+T + ++DA C R+ EALE+L M +RGC PNV T+NS+I
Sbjct: 276 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 335
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
LCK R ++ ++ N +P+++TFN L+ K E+ + E M
Sbjct: 336 DGLCKSDRSGEAFQI--ALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 393
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ T+ ++ + R + M G+ P+ +Y V++HGL GR+E+
Sbjct: 394 MQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPC 453
Query: 487 SYFHEMRLKGMVPEPRT 503
+ EM G VPE T
Sbjct: 454 EFLEEMVSSGCVPESMT 470
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 127/278 (45%), Gaps = 39/278 (14%)
Query: 261 NIILNGWCVLGNVYEAKRFWK-DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
NI+L C G A ++ ++ + P VTY T +N L K +LG + LF+ +
Sbjct: 49 NIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 108
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
++G PDVVT N +ID+LC + EA + M +RGC+PNV TY+ LI LCK+ R++
Sbjct: 109 KRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRID 168
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME--RNG----------- 426
E + EM +K+ LPN IT+N L L K E M R+G
Sbjct: 169 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 228
Query: 427 -------CKMS-TD-----------------TYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
CK TD TYN ++ D ++ E M KG
Sbjct: 229 STLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKG 288
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ PD +Y+V++ R+++AL H M +G P
Sbjct: 289 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 326
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 166/369 (44%), Gaps = 21/369 (5%)
Query: 148 REGD--YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYA 199
R+G SP + F+ ++D L + + E D+M P++V TY L+N
Sbjct: 215 RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVV---TYNALVNGLC 269
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIK 258
A +E A + + + G D+ + L+ C+ V E E ++
Sbjct: 270 KADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVV 329
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N I++G C EA + + PD VT+ + K G A LF+ M
Sbjct: 330 TFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEM 389
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
K +PDV+T +ID LC ++ A ++L M N G PNV TYN L+ LCK R+
Sbjct: 390 VAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRI 449
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN 435
E E+L+EM C+P +T+ L+ +L + ++ ++ +++ G T TYN
Sbjct: 450 EEPCEFLEEMVSSG--CVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYN 507
Query: 436 VILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+++ L+ + E + EEM KG PD ++ GL+ G L + +
Sbjct: 508 ILVDGLWKSGKTEQAIT-VLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLA 566
Query: 495 KGMVPEPRT 503
KGM+P+ T
Sbjct: 567 KGMLPDATT 575
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 169/418 (40%), Gaps = 57/418 (13%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVF-----DEMPDLV 186
D E A +S G P ++ +++ L GR ELIQ D +P+++
Sbjct: 131 DLEEARRLHGGMSSRG-CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNII 189
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL---DDLSAFQNLLLWLCRYKHVEVAE 243
TY L+ M EA + R G L D F L+ LC+ + A
Sbjct: 190 ---TYNSFLDGLCKQSMTAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEA- 244
Query: 244 TFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ GY ++ T N ++NG C + A + ++ PD +TY+ V+A
Sbjct: 245 --CNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDA 302
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K ++ AL L M +G P+VVT N IID LC R EA ++ ++ NR +P+
Sbjct: 303 FCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPD 362
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKN-------------GSC------------- 395
T+N LI CK E +EM KN G C
Sbjct: 363 KVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILD 422
Query: 396 -------LPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
PN +T+N L+ L K EE LE M +GC + TY ++
Sbjct: 423 LMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRAS 482
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D +++ G PD +Y +++ GL+ G+ E A++ EM KG P+ T
Sbjct: 483 RTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 540
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 45/259 (17%)
Query: 153 SPGSNVFNAILDVLGRARR----FVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEE 206
+P FN+I+D L ++ R F +QV++ M PD V T+ IL+ A E+
Sbjct: 325 TPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKV---TFNILIAGACKAGNFEQ 381
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILN 265
A +F+ D+ F L+ LC+ VE A + N ++ T N++++
Sbjct: 382 ASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVH 441
Query: 266 GWCVLGNVYEAKRFWKDIIKSKC-----------------------------------EP 290
G C G + E F ++++ S C +P
Sbjct: 442 GLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDP 501
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D+VTY V+ L K GK A+ + + M KG +PD T L + +E+L
Sbjct: 502 DTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELL 561
Query: 351 REMKNRGCLPNVTTYNSLI 369
R + +G LP+ TT +S++
Sbjct: 562 RVVLAKGMLPDATTCSSIL 580
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 8/204 (3%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
+A+ F + V++ + P F A++D L +A + + D M +L N TY +
Sbjct: 381 QASALFEEMVAK--NMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L++ + +EE + G + + + +L+ LCR + A K+ F
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKS-F 497
Query: 254 GYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G+D T+ NI+++G G +A ++++ +PDS T+A L + G L
Sbjct: 498 GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGT 557
Query: 312 LRLFQAMWEKGRKPDVVTCNCIID 335
+ L + + KG PD TC+ I+D
Sbjct: 558 MELLRVVLAKGMLPDATTCSSILD 581
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 180/359 (50%), Gaps = 18/359 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N++L+ + + E +++F M PD+V TY +++ V EA
Sbjct: 76 PSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVV---TYSTIISGLCKTGKVTEA 132
Query: 208 IG-VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
+ +F + E G + A+ L+ LC+ +++E A E E GY D T N IL
Sbjct: 133 LEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLE-EMASKGYVPDNITYNTIL 191
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G C +G V EAK+F+ + PD V Y ++AL K+GK A++LF+ + KG
Sbjct: 192 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYM 251
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD VT N I+ L K + EA E+ ++M GC PN TY+ ++ C+ K+++ ++
Sbjct: 252 PDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKV 311
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLY 441
L+EM + +P+ +T+N LL L K ++ + M NGC +Y+V+L
Sbjct: 312 LEEMSKIGA--VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 369
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ R ++ M ++ + PD ++ +++ GL G+L++A +M G P+
Sbjct: 370 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPD 428
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 178/373 (47%), Gaps = 11/373 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILL 195
Y F+ + G SP +N ++D + R E ++++EM + E TY LL
Sbjct: 27 GYKLFEQMLDNG-ISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLL 85
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
N + ++EA+ +F E G D+ + ++ LC+ V A + E G
Sbjct: 86 NAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGC 145
Query: 256 DIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
T+ N ++NG C N+ A + +++ PD++TY T ++ L + GK+ A +
Sbjct: 146 SANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQ 205
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
F +M +G PDVV N ++DAL + + EA+++ +++ +G +P+ TYNS++ L
Sbjct: 206 FFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLA 265
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMS 430
+ M+ E +M C PN T++ +L KK ++ VLE M + G
Sbjct: 266 RKSNMDEAEEMFKKMVAS--GCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPD 323
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TYN++L + DK + M G PD SY+V+++GL ++ DA F
Sbjct: 324 VVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFD 383
Query: 491 EMRLKGMVPEPRT 503
M + +VP+ T
Sbjct: 384 RMIERKLVPDVVT 396
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 125/248 (50%), Gaps = 4/248 (1%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T ++L +C G + + + ++ ++ + PD + Y ++ KKG++ A RL++ M
Sbjct: 10 TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
G +P + T N +++A C + ++ EA+E+ + M +G P+V TY+++I LCK ++
Sbjct: 70 VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYN 435
E L + G C N + +N L+ L K E + +LE M G TYN
Sbjct: 130 TEALEMLFHKMIERG-CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYN 188
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
IL + + ++ M +G PD +Y ++ LY +G+ ++A+ F ++ K
Sbjct: 189 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAK 248
Query: 496 GMVPEPRT 503
G +P+ T
Sbjct: 249 GYMPDTVT 256
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKTYG 192
A FF + G YSP +N +LD L + + E +++F + MPD V TY
Sbjct: 203 AKQFFDSMPSRG-YSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTV---TYN 258
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
+L A ++EA +F + G + + + +L CR K V+ A E E ++
Sbjct: 259 SILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLE-EMSK 317
Query: 253 FGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
G D+ T NI+L+G C V +A + ++ + C PD V+Y+ +N L K K+
Sbjct: 318 IGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHD 377
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A LF M E+ PDVVT N ++D LC ++ EA ++L +M GC P+ YN+L+
Sbjct: 378 ARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMN 437
Query: 371 HLCKIKR 377
L K R
Sbjct: 438 GLRKQGR 444
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
+C P+ T+ + + K+GKL +LF+ M + G PD + N +ID K R+ EA
Sbjct: 3 ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
+ EM + G P++ TYNSL+ CK +M+ E M +K P+ +T++ ++
Sbjct: 63 NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFE--PDVVTYSTII 120
Query: 407 KSLKKPEEVPWVLE----RMERNGCKMSTDTYNVILKLYVNWDCED----KVRHTWEEME 458
L K +V LE +M GC +T YN + +N C+D + EEM
Sbjct: 121 SGLCKTGKVTEALEMLFHKMIERGCSANTVAYNAL----INGLCKDENIERAYKLLEEMA 176
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
KG PD +Y ++ GL G++ +A +F M +G P+
Sbjct: 177 SKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPD 218
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 5/229 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+ A FK V +G Y P + +N+IL L R E ++F +M N TY I
Sbjct: 236 DEAMKLFKDVIAKG-YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSI 294
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNE 252
+L+ + A V++A V + + G + D+ + LL LC+ V+ A F + N
Sbjct: 295 VLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 354
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
DI + +++LNG C V++A+ + +I+ K PD VT+ ++ L K GKL A
Sbjct: 355 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 414
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L M G PD V N +++ L + R +A + + MK +G L +
Sbjct: 415 DLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP--- 412
R C PN T+ ++K CK ++ Y+ ++M S P+ I +N L+ K
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGIS--PDGIEYNILIDGYAKKGRV 59
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+E + E M G + S TYN +L + + ++ M +KG PD +Y+ +
Sbjct: 60 DEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTI 119
Query: 473 IHGLYDKGRLEDALSY-FHEMRLKG 496
I GL G++ +AL FH+M +G
Sbjct: 120 ISGLCKTGKVTEALEMLFHKMIERG 144
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 206/408 (50%), Gaps = 23/408 (5%)
Query: 120 LTDDLIVNVINRY-RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
+T ++I+N + R R D A F +S G + P + + +L L A+R+ ++ ++
Sbjct: 247 VTYNVIINGMCREGRVD--DAREFLNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEEL 303
Query: 179 FDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
F EM + + NE T+ +L+ + MVE AI V ++ G + + ++ +C+
Sbjct: 304 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 363
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMN--IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
V+ A F + +G T++ +L G C +AK K++++ C P+ V
Sbjct: 364 QGRVDDAFQFLNN-MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 422
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ TF+ L +KG + A L + M E G + ++VT N +++ C + R+ ALE+ M
Sbjct: 423 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 482
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP- 412
C PN TY +L+ LC +R++ E L EM QK+ C PN +TFN L+ +
Sbjct: 483 P---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD--CAPNVVTFNVLVSFFCQKG 537
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC-EDKVRHTWEEMEKKGMGPDQRSY 469
+E ++E+M +GC + TYN +L + DC ++ + G+ PD +Y
Sbjct: 538 LMDEAIELVEQMMEHGCTPNLITYNTLLD-GITKDCNSEEALELLHGLVSNGVSPDIVTY 596
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517
+ +I L + R+E+A+ FH ++ GM P+ ++ N + + L +R
Sbjct: 597 SSIIGVLSREDRVEEAIKMFHIVQDLGMRPK---AVIYNKILLALCKR 641
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 148/335 (44%), Gaps = 10/335 (2%)
Query: 168 RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
RA R V+ E PD+ L+ +A V + G D+ A+
Sbjct: 92 RAARLVDRATSRGEAPDVY---LCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 148
Query: 228 NLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
L+ CRY ++ A S D T I+ G C G V EA D++
Sbjct: 149 TLVAGYCRYGQLDAARRLIASMP--VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 206
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
C+P VTY + A+ K G A+ + M KG P++VT N II+ +C + R+ +A
Sbjct: 207 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 266
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
E L + + G P+ +Y +++K LC KR E V E EM +KN C+PNE+TF+ L++
Sbjct: 267 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN--CMPNEVTFDMLVR 324
Query: 408 SLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
+ E VLE+M +GC +T N+++ D M G P
Sbjct: 325 FFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 384
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D SYT ++ GL R EDA EM K P
Sbjct: 385 DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 419
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 130/278 (46%), Gaps = 10/278 (3%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYG 192
WE A K + R+ + P FN + +L G + LI+ E VN TY
Sbjct: 402 WEDAKELLKEMVRK-NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYN 460
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
L+N + V+ A+ +F + + LL LC + ++ A E E +
Sbjct: 461 ALVNGFCVQGRVDSALELF---YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK 517
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ ++ T N++++ +C G + EA + +++ C P+ +TY T ++ +TK A
Sbjct: 518 DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEA 577
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L L + G PD+VT + II L + R+ EA+++ +++ G P YN ++
Sbjct: 578 LELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLA 637
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
LCK + ++ M NG C+PNE+T+ L++ L
Sbjct: 638 LCKRCNTDGAIDFFAYM-VSNG-CMPNELTYITLIEGL 673
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 10/213 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + + +L L A R ++ EM P++V T+ +L++ + +++EA
Sbjct: 486 PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVV---TFNVLVSFFCQKGLMDEA 542
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNG 266
I + ++ E G +L + LL + + + E A E N DI T + I+
Sbjct: 543 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 602
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
V EA + + + P +V Y + AL K+ A+ F M G P+
Sbjct: 603 LSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPN 662
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+T +I+ L + + E ++LRE+ +RG L
Sbjct: 663 ELTYITLIEGLANEDFLKETRDLLRELCSRGVL 695
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 206/408 (50%), Gaps = 23/408 (5%)
Query: 120 LTDDLIVNVINRY-RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
+T ++I+N + R R D A F +S G + P + + +L L A+R+ ++ ++
Sbjct: 216 VTYNVIINGMCREGRVD--DAREFLNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEEL 272
Query: 179 FDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
F EM + + NE T+ +L+ + MVE AI V ++ G + + ++ +C+
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMN--IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
V+ A F + +G T++ +L G C +AK K++++ C P+ V
Sbjct: 333 QGRVDDAFQFLNN-MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ TF+ L +KG + A L + M E G + ++VT N +++ C + R+ ALE+ M
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP- 412
C PN TY +L+ LC +R++ E L EM QK+ C PN +TFN L+ +
Sbjct: 452 P---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD--CAPNVVTFNVLVSFFCQKG 506
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC-EDKVRHTWEEMEKKGMGPDQRSY 469
+E ++E+M +GC + TYN +L + DC ++ + G+ PD +Y
Sbjct: 507 LMDEAIELVEQMMEHGCTPNLITYNTLLD-GITKDCNSEEALELLHGLVSNGVSPDIVTY 565
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517
+ +I L + R+E+A+ FH ++ GM P+ ++ N + + L +R
Sbjct: 566 SSIIGVLSREDRVEEAIKMFHIVQDLGMRPK---AVIYNKILLALCKR 610
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 149/339 (43%), Gaps = 10/339 (2%)
Query: 164 DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
D L A R V+ E PD+ L+ +A V + G D+
Sbjct: 57 DDLAEAARLVDRATSRGEAPDVY---LCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDV 113
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
A+ L+ CRY ++ A S D T I+ G C G V EA D+
Sbjct: 114 FAYNTLVAGYCRYGQLDAARRLIASMP--VAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+ C+P VTY + A+ K G A+ + M KG P++VT N II+ +C + R+
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
+A E L + + G P+ +Y +++K LC KR E V E EM +KN C+PNE+TF+
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN--CMPNEVTFD 289
Query: 404 YLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
L++ + E VLE+M +GC +T N+++ D M
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
G PD SYT ++ GL R EDA EM K P
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 130/278 (46%), Gaps = 10/278 (3%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYG 192
WE A K + R+ + P FN + +L G + LI+ E VN TY
Sbjct: 371 WEDAKELLKEMVRK-NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYN 429
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
L+N + V+ A+ +F + + LL LC + ++ A E E +
Sbjct: 430 ALVNGFCVQGRVDSALELF---YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK 486
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ ++ T N++++ +C G + EA + +++ C P+ +TY T ++ +TK A
Sbjct: 487 DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEA 546
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L L + G PD+VT + II L + R+ EA+++ +++ G P YN ++
Sbjct: 547 LELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLA 606
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
LCK + ++ M NG C+PNE+T+ L++ L
Sbjct: 607 LCKRCNTDGAIDFFAYM-VSNG-CMPNELTYITLIEGL 642
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 8/202 (3%)
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L + L A RL +G PDV C +I LC + R +A VLR + G +
Sbjct: 53 LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD 112
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V YN+L+ C+ +++ + M P+ T+ +++ L + E +
Sbjct: 113 VFAYNTLVAGYCRYGQLDAARRLIASMPVA-----PDAYTYTPIIRGLCDRGRVGEALSL 167
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L+ M GC+ S TY V+L+ + +EM KG P+ +Y V+I+G+
Sbjct: 168 LDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCR 227
Query: 479 KGRLEDALSYFHEMRLKGMVPE 500
+GR++DA + + + G P+
Sbjct: 228 EGRVDDAREFLNRLSSYGFQPD 249
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 121/291 (41%), Gaps = 30/291 (10%)
Query: 86 PGDEIAINVQNILKTCSVSTKGEIEKAL--------NQCELTLT--DDLIVNVINRYRFD 135
P +E+ N C + KG IE+A + CE+ + + L+ + R D
Sbjct: 387 PPNEVTFNT----FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 442
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
A F+ + P + + +L L A R ++ EM P++V
Sbjct: 443 -SALELFYSMPCK-----PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVV--- 493
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
T+ +L++ + +++EAI + ++ E G +L + LL + + + E A E
Sbjct: 494 TFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGL 553
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
N DI T + I+ V EA + + + P +V Y + AL K+
Sbjct: 554 VSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNT 613
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
A+ F M G P+ +T +I+ L + + E ++LRE+ +RG L
Sbjct: 614 DGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664
>gi|413932624|gb|AFW67175.1| hypothetical protein ZEAMMB73_588183 [Zea mays]
Length = 520
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 197/416 (47%), Gaps = 30/416 (7%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
++KT + S G+ AL+ LT L+ +V++R R++ + A+ FF W S++ Y+
Sbjct: 54 VIKTGTESNAGK--AALDALGAELTTPLVADVLHRLRYEEKLAFRFFAWASQQDGYNHEP 111
Query: 157 NVFNAILDVLG----RARRFVELIQVFDEMP----------DLVNEKTYGILLNRYAAAH 202
+N I+D+L ++R+F L V D M DL+ +L Y H
Sbjct: 112 TTYNDIIDILSGTRYKSRQFGVLCNVLDHMKRHGSRSVPVEDLLE------ILRAYTEKH 165
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI 262
+ RR + A LL C+ V+ AE F K + + +T +
Sbjct: 166 LTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYST 225
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+ GWC + +A + +++I+ K P+S TY + + G + A LF+ M +G
Sbjct: 226 LFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIISFCSAGLVSEARELFEFMRTEG 285
Query: 323 ---RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
P T + +I AL R+ E E+L +M++ GC+P+VTTY LI+ +C + +++
Sbjct: 286 LTISSPTAKTYSIMIVALAKADRMEECFELLSDMRSCGCMPDVTTYKDLIEGMCLVGKLD 345
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNV 436
Y LDEM + P+ +T+N L S +K ++ + ERM C+ S TYN+
Sbjct: 346 AAYRVLDEMGRAGFP--PDIVTYNCFLNVFCSHRKADDALELCERMIEAHCEPSVHTYNM 403
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
++ ++ + EM+K+ +Y +MI+GL+D G E A + E+
Sbjct: 404 MMMMFFEMGEAHRALDICLEMDKRRCQRAIDTYEIMIYGLFDCGETEYATALLDEV 459
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 9/182 (4%)
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+ N ++DA C + EA V +K R L N TY++L C+ + + +
Sbjct: 184 PETDALNVLLDAFCKCGMVKEAEAVFGRVK-RKLLGNAETYSTLFFGWCRARDPKKAMKV 242
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT---YNVIL 438
L+EM Q + P T+ + S E + E M G +S+ T Y++++
Sbjct: 243 LEEMIQMKHT--PESFTYVAAIISFCSAGLVSEARELFEFMRTEGLTISSPTAKTYSIMI 300
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D ++ +M G PD +Y +I G+ G+L+ A EM G
Sbjct: 301 VALAKADRMEECFELLSDMRSCGCMPDVTTYKDLIEGMCLVGKLDAAYRVLDEMGRAGFP 360
Query: 499 PE 500
P+
Sbjct: 361 PD 362
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 170/366 (46%), Gaps = 18/366 (4%)
Query: 150 GDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHM 203
G + P +N+I+D + V+ ++ + PD E TY L+N +
Sbjct: 394 GGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPD---EFTYCSLVNGFCQDGD 450
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMN 261
++A+ VF G + + L+ LC+ + A +E E G DI T N
Sbjct: 451 PDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLM-NEMAEKGCKPDIWTYN 509
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+I+NG C +G + +A D I C PD TY T V+ ++ KL +A+ L MW +
Sbjct: 510 LIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQ 569
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G PDV+T N +++ LC + E +E+ + M +GC PN+ TYN++I+ LC K++
Sbjct: 570 GMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEA 629
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERN-GCKMSTDTYNVI 437
+ L EM+ K + P+ ++F L+ K ++ + ME+ +T TYN+I
Sbjct: 630 VDLLGEMKSKGLT--PDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNII 687
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + + EM+K G PD +Y V+I G G + + E KG
Sbjct: 688 ISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGF 747
Query: 498 VPEPRT 503
+P T
Sbjct: 748 IPSLTT 753
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 156/354 (44%), Gaps = 9/354 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIGV 210
P +NAI+++L F + +V+ M D E TY I + + A+ +
Sbjct: 188 PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRL 247
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCV 269
G + A+ ++ + + A E F E + D+ T N +++ C
Sbjct: 248 LRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCK 307
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G V E++R + ++K P+ T+ F+ L K+G L A+RL + +G +PDVVT
Sbjct: 308 KGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVT 367
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I LC K R+ EA E L +M N G PN TYNS+I CK + L +
Sbjct: 368 YNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAV 427
Query: 390 QKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
K P+E T+ L+ + P++ V + G + S YN ++K
Sbjct: 428 FKGFK--PDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGL 485
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
EM +KG PD +Y ++I+GL G L DA + KG +P+
Sbjct: 486 ILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPD 539
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 112/241 (46%), Gaps = 13/241 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P +N +L+ L + + E++++F M P+++ TY ++ + V E
Sbjct: 572 TPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNII---TYNTIIESLCNSKKVNE 628
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF--GYDIKTMNIIL 264
A+ + K G D+ +F L+ C+ ++ A F + ++ + T NII+
Sbjct: 629 AVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIII 688
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ + N+ A R + ++ K+ C+PD+ TY ++ K G + + EKG
Sbjct: 689 SAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFI 748
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P + T +++ LC + ++ EA+ ++ M + +P+ T N++ + K YE+
Sbjct: 749 PSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD--TVNTIFEADKKGHITYHAYEF 806
Query: 385 L 385
L
Sbjct: 807 L 807
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 11/247 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N ++D R + I++ + M PD++ TY LLN EE
Sbjct: 538 PDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVI---TYNTLLNGLCKTAKSEEV 594
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNG 266
+ +F E G ++ + ++ LC K V E + E + D+ + ++ G
Sbjct: 595 MEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITG 654
Query: 267 WCVLGNVYEAKRFWKDIIKS-KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+C +G++ A ++ + K + TY ++A +++ + ALRLF M + G P
Sbjct: 655 FCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDP 714
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D T +ID C + + + L E +G +P++TT+ ++ LC +++ +
Sbjct: 715 DNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGII 774
Query: 386 DEMEQKN 392
M QK+
Sbjct: 775 HLMVQKD 781
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 7/237 (2%)
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G + EA ++ + C+P +Y +N L + G A +++ M +K + DV T
Sbjct: 169 GKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTY 228
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
I + C R AL +LR M GC N Y +++ + + E DEM +
Sbjct: 229 TIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLE 288
Query: 391 KNGSCL-PNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
CL P+ TFN L+ +L K E + +++ + G + T+N+ ++
Sbjct: 289 ---CCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGS 345
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ + ++G+ PD +Y +I GL K R+ +A H+M G P T
Sbjct: 346 LDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFT 402
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 117/299 (39%), Gaps = 40/299 (13%)
Query: 240 EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
E +TF + + + N I+N G +A + + + K E D TY +
Sbjct: 173 EAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRI 232
Query: 300 NALTKKGKLGTALR-----------------------------------LFQAMWEKGRK 324
+ + G+ ALR LF M E
Sbjct: 233 KSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLC 292
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDV T N ++ ALC K + E+ + ++ RG PN+ T+N I+ LCK ++
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLY 441
L + ++ P+ +T+N ++ L + E L +M G + + TYN I+ Y
Sbjct: 353 LGCVSRE--GLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGY 410
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++ KG PD+ +Y +++G G + A++ F + KG+ P
Sbjct: 411 CKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPS 469
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 186/402 (46%), Gaps = 51/402 (12%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R+ + P +NA+L L R + +++ M PD+V TY LL+ +
Sbjct: 2 RKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVV---TYNTLLHGFCKV 58
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTM 260
++EA+ +FD + G + D+ + L+ C+ ++ A+ + +E D+ T
Sbjct: 59 GELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTY 118
Query: 261 NIILNGWCVLGNVYEAK---------------------------------RFWKDIIKSK 287
N ++NG C G V EA+ + + ++K
Sbjct: 119 NSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQG 178
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
EP+ TY ++ L K+ ++ A LF + + G +PD +T ID LC R+ +AL
Sbjct: 179 YEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDAL 238
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+L++M +GC+P+V ++N++I LCK KR++ L ME K C PN I+FN L+
Sbjct: 239 LMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK--GCSPNAISFNTLIC 296
Query: 408 S---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT---WEEMEKKG 461
K ++ + M + G K + TYN+++ E +++ ++ M +KG
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 356
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
PD +Y+ +I GL G+L+DA M KG +P T
Sbjct: 357 RVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYT 398
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 175/398 (43%), Gaps = 51/398 (12%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKTYGILLNRYAAAHMVE 205
YSP +N +L + E +++FD +PD+V TY L+N + A ++
Sbjct: 41 YSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVV---TYNALINGFCKADKLD 97
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-------------------------- 239
EA + R + D+ + +L+ LC+ V
Sbjct: 98 EAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGL 157
Query: 240 --------EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
E + F K + ++ T NI+++G V EA + ++K EPD
Sbjct: 158 CRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPD 217
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
++TY F++ L K G++ AL + + M EKG PDVV+ N +I+ LC +KR+ EA +L
Sbjct: 218 AITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLS 277
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
M+ +GC PN ++N+LI C+ + + EM ++ P +T+N L+ L K
Sbjct: 278 GMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR--GVKPTVVTYNILVDGLCK 335
Query: 412 P------EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
+E + + M G TY+ ++ D R ME KG P+
Sbjct: 336 ARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPN 395
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+Y +I GL ++++AL F M KG VP+ T
Sbjct: 396 VYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTIT 433
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 122/276 (44%), Gaps = 49/276 (17%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F V ++G Y P +N ++D L + R E ++F + PD + TY
Sbjct: 167 ALKLFGSVLKQG-YEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAI---TYT 222
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE--------- 243
+ ++ A VE+A+ + E G + D+ + ++ LC+ K V+ AE
Sbjct: 223 VFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 282
Query: 244 ---------------------------TFFESEKNEFGYDIKTMNIILNGWCVL---GNV 273
TF E K + T NI+++G C G +
Sbjct: 283 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 342
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA + +I+ PD VTY+ ++ L K GKL A RL AM KG P+V T N +
Sbjct: 343 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 402
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
I LC +++ EALE+ M +GC+P+ TY ++I
Sbjct: 403 ISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M + G P+ +T N ++ LC R+ +A + M G P+V TYN+L+ CK+
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTY 434
++ + D ++ +P+ +T+N L+ K +E +L+RM TY
Sbjct: 61 LDEALKIFDGAVKR--GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTY 118
Query: 435 NVILKLYVNWDCED-KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR-LEDALSYFHEM 492
N + VN C++ +V + KG P+ +Y+ +I GL + R + +AL F +
Sbjct: 119 NSL----VNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSV 174
Query: 493 RLKGMVPE-PRTGILVNDM 510
+G PE P IL++ +
Sbjct: 175 LKQGYEPEVPTYNILIDGL 193
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 179/362 (49%), Gaps = 42/362 (11%)
Query: 178 VFDEMPDLVNEKTY--GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
V+D++ + + Y GILL + +E+A ++ G L D+S F + LCR
Sbjct: 4 VYDKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYISGLCR 62
Query: 236 YKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ A+T F+ K+ F + T N +L+G C G + +A+ ++ +IK+ PD VT
Sbjct: 63 ASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVT 122
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y T ++ K GKL AL++F ++G PDVVT N +I+ C ++ EA +L+ M
Sbjct: 123 YNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV 182
Query: 355 NRGCLPNVTTYNSLIKHLCK---------------------------------IKRMETV 381
+ +P+V TYNSL+ LCK ++R+E+
Sbjct: 183 SESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESA 242
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVIL 438
+ L++M NG C P+ +++N L+ L + + V L+ + R G + TYN+++
Sbjct: 243 RQLLEKMVL-NG-CKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILI 300
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ D ++ + + K G+ PD +YTV I GL GR+EDAL +M KG V
Sbjct: 301 DGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV 360
Query: 499 PE 500
P+
Sbjct: 361 PD 362
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 191/378 (50%), Gaps = 21/378 (5%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKTYG 192
A ++ + + G YSP +N +L + + E +++FD +PD+V TY
Sbjct: 104 AQALYERMIKAG-YSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVV---TYN 159
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
L+N + A ++EA + R + D+ + +L+ LC+ V+ A +
Sbjct: 160 ALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKG-- 217
Query: 253 FGYDIKTMNIILNGWCV-LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
F ++ T + +++G C L + A++ + ++ + C+PD V+Y ++ L ++ + A
Sbjct: 218 FSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEA 277
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L+LF ++ +G +P+V T N +ID L + R+ EA E+ + G P+ TY I
Sbjct: 278 LKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDG 337
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
LCK R+E L +M++K C+P+ ++ N ++ L K+ +E +L ME GC
Sbjct: 338 LCKAGRVEDALLMLKDMDEKG--CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 395
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY---DKGRLEDA 485
+ ++N ++ K T++EM K+G+ P +Y +++ GL +GR+++A
Sbjct: 396 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 455
Query: 486 LSYFHEMRLKGMVPEPRT 503
++ F M KG VP+ T
Sbjct: 456 ITLFDAMIEKGRVPDVVT 473
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 11/290 (3%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRF 279
D+ ++ L+ L R + V A F S + GY+ + T NI+++G V EA
Sbjct: 257 DIVSYNALIHGLAREQGVSEALKLFGSVLRQ-GYEPEVPTYNILIDGLLKEDRVNEAFEL 315
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
+ ++K EPD++TY F++ L K G++ AL + + M EKG PDVV+ N +I+ LC
Sbjct: 316 FSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCK 375
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+KR+ EA +L M+ +GC PN ++N+LI C+ + + EM ++ P
Sbjct: 376 EKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK--PTV 433
Query: 400 ITFNYLLKSLKKP------EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
+T+N L+ L K +E + + M G TY+ ++ D R
Sbjct: 434 VTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRL 493
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
ME KG P+ +Y +I GL ++++AL F M KG VP+ T
Sbjct: 494 LGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTIT 543
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 161/346 (46%), Gaps = 20/346 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+NA++ L R + E +++F + P++ TY IL++ V EA +F
Sbjct: 261 YNALIHGLAREQGVSEALKLFGSVLRQGYEPEV---PTYNILIDGLLKEDRVNEAFELFS 317
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVL 270
+ G D + + LC+ VE A + + +E G D+ + N ++NG C
Sbjct: 318 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK-DMDEKGCVPDVVSHNAVINGLCKE 376
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
V EA+ + C P+++++ T + + GK A+ F+ M ++G KP VVT
Sbjct: 377 KRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTY 436
Query: 331 NCIIDALCFKK---RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
N ++D LC + RI EA+ + M +G +P+V TY++LI L K +++ L
Sbjct: 437 NILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGA 496
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNW 444
ME K C+PN T+N L+ L ++V LE M GC T TY I+
Sbjct: 497 MEAKG--CIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQ 554
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
+ DK ++ + G+ P Y +I GL R+++AL
Sbjct: 555 EMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 128/293 (43%), Gaps = 49/293 (16%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F V R+G Y P +N ++D L + R E ++F + PD + TY
Sbjct: 277 ALKLFGSVLRQG-YEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAI---TYT 332
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE--------- 243
+ ++ A VE+A+ + E G + D+ + ++ LC+ K V+ AE
Sbjct: 333 VFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 392
Query: 244 ---------------------------TFFESEKNEFGYDIKTMNIILNGWCVL---GNV 273
TF E K + T NI+++G C G +
Sbjct: 393 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 452
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA + +I+ PD VTY+ ++ L K GKL A RL AM KG P+V T N +
Sbjct: 453 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 512
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
I LC ++ EALE+ M +GC+P+ TY ++I LCK + ++ D
Sbjct: 513 ISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFD 565
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHM--- 203
SP + FN ++ RA ++ + + F EM P +V TY IL++ A
Sbjct: 395 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVV---TYNILVDGLCKARQEGR 451
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
++EAI +FD E G + D+ + L+ L + ++ A + E ++ T N
Sbjct: 452 IKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNS 511
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++G C L V EA + +++ C PD++TY T ++AL K+ + AL LF E G
Sbjct: 512 LISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAG 571
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLR 351
P +ID LC R+ EAL++L+
Sbjct: 572 VVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 181/376 (48%), Gaps = 13/376 (3%)
Query: 152 YSPGSNV-FNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEA 207
+ P S V F +L + + + + ++ + +M N T IL+N + + V A
Sbjct: 51 HPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFA 110
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
V + + G D + F L+ LC + A F+ +E F ++ T ++NG
Sbjct: 111 FSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLING 170
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +GN A R + + + C+PD V Y + +++L K ++ A LF M +G PD
Sbjct: 171 LCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 230
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+ T ++ ALC +L +M N LP+V +++++ LCK ++ +E +D
Sbjct: 231 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 290
Query: 387 EMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
M Q+ P+ +T+ L+ + +E V + M R G +Y ++ Y
Sbjct: 291 MMIQRGVE--PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCK 348
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
DK + +EEM +K PD ++Y ++HGL GRL+DA++ FHEM +G +P+ T
Sbjct: 349 IHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVT 408
Query: 504 -GILVNDM--NIKLKE 516
IL++ + N L+E
Sbjct: 409 YSILLDSLCKNCHLEE 424
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 177/412 (42%), Gaps = 45/412 (10%)
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---L 185
+NR F A++ + + G + P F ++ L + E + +FD+M D
Sbjct: 104 LNRVGF----AFSVLAKILKLG-HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 158
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
N TYG L+N AI + ++ D+ + +++ LC+ + V A
Sbjct: 159 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 218
Query: 246 FESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
F + DI T +++ C L ++ SK PD V ++T V+AL K
Sbjct: 219 FSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK 278
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
+GK+ A + M ++G +PDVVT ++D C + + EA++V M +G P+V +
Sbjct: 279 EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 338
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQK-------------NGSC---------------- 395
Y +LI CKI +++ +EM +K +G C
Sbjct: 339 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMV 398
Query: 396 ----LPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
+P+ +T++ LL SL K EE +L+ +E + YN+I+ +
Sbjct: 399 ARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELE 458
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
R + + KG+ P +Y +MIHGL +G L +A F EM P+
Sbjct: 459 AARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPD 510
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 160/372 (43%), Gaps = 15/372 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
+G+ P ++ +I+D L + R+ E +F +M PD+ TY L++
Sbjct: 189 QGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF---TYTSLVHALCNLC 245
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMN 261
+ + ++ L D+ F ++ LC+ V A + + D+ T
Sbjct: 246 EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 305
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++G C+ + EA + + +++ PD ++Y T +N K K+ A+ LF+ M K
Sbjct: 306 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 365
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
PD T N ++ LC R+ +A+ + EM RG +P++ TY+ L+ LCK +E
Sbjct: 366 EWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEA 425
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVIL 438
L +E N + P+ +N ++ + + E+ + + G S TYN+++
Sbjct: 426 MALLKAIEASNLN--PDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 483
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
++ + EM+ PD +Y + G A+ EM +G
Sbjct: 484 HGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 543
Query: 499 PEPRTGILVNDM 510
+ T L+ +M
Sbjct: 544 ADVSTTTLLVEM 555
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 148/336 (44%), Gaps = 48/336 (14%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +F+ ++D L + + E ++ D M PD+V TY L++ + ++EA
Sbjct: 264 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVV---TYTTLMDGHCLQSEMDEA 320
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
+ VFD G F D+ + ++NG+
Sbjct: 321 VKVFDMMVRKG----------------------------------FAPDVISYTTLINGY 346
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C + + +A ++++ + + PD+ TY T ++ L G+L A+ LF M +G+ PD+
Sbjct: 347 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDL 406
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT + ++D+LC + EA+ +L+ ++ P++ YN +I +C+ +E +
Sbjct: 407 VTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSN 466
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
+ K P+ T+N ++ L K E + M+ N C TYN I + ++
Sbjct: 467 LSSKG--LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQN 524
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
+ + EEM +G D + T+++ L D G
Sbjct: 525 NETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560
>gi|9857539|gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thaliana]
Length = 490
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 211/446 (47%), Gaps = 22/446 (4%)
Query: 66 TAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVST-KGEIEKALNQCELTLTDDL 124
+ +HS+A SD K P +E + + + + + S + E++++L+ + L+ DL
Sbjct: 18 SVSFLHSVALSDAK-----VPVEEEGDDAETVFRMINGSNLQVELKESLSSSGIHLSKDL 72
Query: 125 IVNVINRYRFDWE---AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE 181
I V+ R RF F+++ S + S + +L +LGR R+F ++ ++ E
Sbjct: 73 IDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIE 132
Query: 182 MP----DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF-GELDDLSAFQNLLLWLCRY 236
L++ +T ++L R A V + + F + K + D + F LL LC+
Sbjct: 133 TKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQE 192
Query: 237 KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
K + A + S K++F D++T NI+L+GW K +PD VTY
Sbjct: 193 KSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMKG---KGLKPDVVTYN 249
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+ ++ K ++ A +L M E+ PDV+T +I L + +A EVL+EMK
Sbjct: 250 SLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEY 309
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV- 415
GC P+V YN+ I++ C +R+ + +DEM +K S PN T+N + L ++
Sbjct: 310 GCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLS--PNATTYNLFFRVLSLANDLG 367
Query: 416 -PWVLE-RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
W L RM N C +T + ++K++ + D WE+M KG G V++
Sbjct: 368 RSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLL 427
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVP 499
L D ++E+A EM KG P
Sbjct: 428 DLLCDLAKVEEAEKCLLEMVEKGHRP 453
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 102/250 (40%), Gaps = 45/250 (18%)
Query: 258 KTMNIILNGWCVLGNVYE-AKRFWKDIIKSKCEPDSVTYATF---VNALTKKGKLGTALR 313
+TM ++L L +V + + FWK + PD A F + L ++ + A
Sbjct: 144 RTMQVVLGRVAKLCSVRQTVESFWK---FKRLVPDFFDTACFNALLRTLCQEKSMTDARN 200
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
++ ++ + +PD+ T N ++ K EA EMK +G P+V TYNSLI C
Sbjct: 201 VYHSLKHQF-QPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYC 256
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDT 433
K + +E Y+ +D+M ++ EE P V+ T
Sbjct: 257 KDREIEKAYKLIDKMREE---------------------EETPDVI-------------T 282
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y ++ DK R +EM++ G PD +Y I RL DA EM
Sbjct: 283 YTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMV 342
Query: 494 LKGMVPEPRT 503
KG+ P T
Sbjct: 343 KKGLSPNATT 352
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N+++DV + R + ++ D+M PD++ TY ++ ++A
Sbjct: 243 PDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVI---TYTTVIGGLGLIGQPDKA 299
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNG 266
V KE+G D++A+ + C + + A+ E K + T N+
Sbjct: 300 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 359
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ ++ + + ++ ++C P++ + + + K+ A+RL++ M KG
Sbjct: 360 LSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSY 419
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
+ + ++D LC ++ EA + L EM +G P+ ++ +
Sbjct: 420 SLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 461
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 182/379 (48%), Gaps = 24/379 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKTYGILLNRYAAAHMVEEA 207
P +N I+D + E ++ + +PD V TY L+N A VE A
Sbjct: 217 PDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRV---TYCSLINGLCAEGDVERA 273
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNG 266
+ +F+ + DL + +L+ LCR + + E ++ DI T NI++NG
Sbjct: 274 LELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVING 333
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +GN+ +A D I PD T+ T ++ K+ KL +AL+L + MW G PD
Sbjct: 334 LCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPD 393
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+T N +++ LC + E E EM +GC PN TYN LI++ CKI ++E +
Sbjct: 394 AITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIV 453
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLY-- 441
M Q +P+ I+FN L+ + ++ + ++++ G + DT+N+++ Y
Sbjct: 454 RMSQD--GLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSS 511
Query: 442 -VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+N +K+ + EM KG PD +Y V++ G ++ A + EM KG VP
Sbjct: 512 KLNMQMAEKI---FGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPS 568
Query: 501 PRT-GILVND--MNIKLKE 516
T G ++N MN ++ E
Sbjct: 569 MATFGRVLNSLAMNHRVSE 587
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 5/303 (1%)
Query: 233 LCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
LC +E A ES D+ T N ++ G C V EA ++ + ++ C PD
Sbjct: 160 LCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDD 219
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
TY T ++ K+ L A L + KG PD VT +I+ LC + + ALE+ E
Sbjct: 220 FTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNE 279
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
+ + P++ YNSL+K LC+ + + ++EM + C P+ T+N ++ L K
Sbjct: 280 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVED--GCHPDIWTYNIVINGLCKM 337
Query: 413 ---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+ V+ G T+N ++ Y D E M G+ PD +Y
Sbjct: 338 GNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITY 397
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTS 529
+++GL G+ ++ F EM LKG P T ++ + K+ + E +++++
Sbjct: 398 NSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQ 457
Query: 530 LGL 532
GL
Sbjct: 458 DGL 460
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 118/248 (47%), Gaps = 6/248 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D +T + + +C+ G + A R + + + C+ + Y T V L G A LF
Sbjct: 44 DARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLF 103
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M + PDV T N ++ ALC K I E+ +L ++ RG N T N I+ LC+
Sbjct: 104 DEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEG 163
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
R+E E + +E + P+ +T+N L++ L K +E L RM GC
Sbjct: 164 GRLE---EAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDF 220
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TYN I+ Y D + ++ KG PD+ +Y +I+GL +G +E AL F+E
Sbjct: 221 TYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEA 280
Query: 493 RLKGMVPE 500
+ K + P+
Sbjct: 281 QAKDLKPD 288
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 134/337 (39%), Gaps = 51/337 (15%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D E A F ++ D P V+N+++ L R + +QV +EM PD+
Sbjct: 269 DVERALELFNE-AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDI--- 324
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY I++N + +A V + G L D+ F ++ C+ ++ A E
Sbjct: 325 WTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVER 384
Query: 249 E-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY------------ 295
D T N +LNG C G E ++++I C P+++TY
Sbjct: 385 MWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 444
Query: 296 -----------------------ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
T ++ + G L A LFQ + EKG T N
Sbjct: 445 LEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 504
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+I A K + A ++ EM ++G P++ TY L+ CK ++ Y +L EM K
Sbjct: 505 LIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSK- 563
Query: 393 GSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNG 426
+P+ TF +L SL + E ++ M R G
Sbjct: 564 -GFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMG 599
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + +N++L+ L +A + E+ + F+EM P N TY IL+ + + +EE
Sbjct: 391 APDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRP---NAITYNILIENFCKINQLEE 447
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK--TMNIIL 264
A GV R + G + D +F L+ CR ++ A F+ + +E GY T NI++
Sbjct: 448 ASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQ-KLDEKGYSATADTFNILI 506
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ N+ A++ + ++I +PD TY V+ K + A M KG
Sbjct: 507 GAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFV 566
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
P + T ++++L R+ EA+ ++ M G +P V
Sbjct: 567 PSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV 605
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%)
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M+ GC + YN I+ VN D+ + M G+ PD R++TV I GR
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 482 LEDALSYFHEMRLKGMVPEP 501
AL + +G +P
Sbjct: 61 PHVALRLLRSLPERGCDVKP 80
>gi|15217756|ref|NP_171744.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806504|sp|Q9FZ19.2|PPR5_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g02420
gi|332189307|gb|AEE27428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 211/446 (47%), Gaps = 22/446 (4%)
Query: 66 TAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVST-KGEIEKALNQCELTLTDDL 124
+ +HS+A SD K P +E + + + + + S + E++++L+ + L+ DL
Sbjct: 19 SVSFLHSVALSDAK-----VPVEEEGDDAETVFRMINGSNLQVELKESLSSSGIHLSKDL 73
Query: 125 IVNVINRYRFDWE---AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE 181
I V+ R RF F+++ S + S + +L +LGR R+F ++ ++ E
Sbjct: 74 IDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIE 133
Query: 182 MP----DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF-GELDDLSAFQNLLLWLCRY 236
L++ +T ++L R A V + + F + K + D + F LL LC+
Sbjct: 134 TKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQE 193
Query: 237 KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
K + A + S K++F D++T NI+L+GW K +PD VTY
Sbjct: 194 KSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMKG---KGLKPDVVTYN 250
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+ ++ K ++ A +L M E+ PDV+T +I L + +A EVL+EMK
Sbjct: 251 SLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEY 310
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV- 415
GC P+V YN+ I++ C +R+ + +DEM +K S PN T+N + L ++
Sbjct: 311 GCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLS--PNATTYNLFFRVLSLANDLG 368
Query: 416 -PWVLE-RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
W L RM N C +T + ++K++ + D WE+M KG G V++
Sbjct: 369 RSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLL 428
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVP 499
L D ++E+A EM KG P
Sbjct: 429 DLLCDLAKVEEAEKCLLEMVEKGHRP 454
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 102/250 (40%), Gaps = 45/250 (18%)
Query: 258 KTMNIILNGWCVLGNVYE-AKRFWKDIIKSKCEPDSVTYATF---VNALTKKGKLGTALR 313
+TM ++L L +V + + FWK + PD A F + L ++ + A
Sbjct: 145 RTMQVVLGRVAKLCSVRQTVESFWK---FKRLVPDFFDTACFNALLRTLCQEKSMTDARN 201
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
++ ++ + +PD+ T N ++ K EA EMK +G P+V TYNSLI C
Sbjct: 202 VYHSLKHQF-QPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYC 257
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDT 433
K + +E Y+ +D+M ++ EE P V+ T
Sbjct: 258 KDREIEKAYKLIDKMREE---------------------EETPDVI-------------T 283
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y ++ DK R +EM++ G PD +Y I RL DA EM
Sbjct: 284 YTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMV 343
Query: 494 LKGMVPEPRT 503
KG+ P T
Sbjct: 344 KKGLSPNATT 353
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N+++DV + R + ++ D+M PD++ TY ++ ++A
Sbjct: 244 PDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVI---TYTTVIGGLGLIGQPDKA 300
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNG 266
V KE+G D++A+ + C + + A+ E K + T N+
Sbjct: 301 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 360
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ ++ + + ++ ++C P++ + + + K+ A+RL++ M KG
Sbjct: 361 LSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSY 420
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
+ + ++D LC ++ EA + L EM +G P+ ++ +
Sbjct: 421 SLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
>gi|125542844|gb|EAY88983.1| hypothetical protein OsI_10467 [Oryza sativa Indica Group]
Length = 525
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 186/412 (45%), Gaps = 19/412 (4%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRF---DWEAAYTFFKWVSREGDYSPGSNV 158
+ T +E AL+ + ++ L+ V+ R+RF D A + +P
Sbjct: 47 AAPTPSAMESALSASGVAISAPLLDLVLRRFRFAHGDPLRALSLLSLALDRHGVAPSPFA 106
Query: 159 FNAILDVLGRARRFVELIQVFDE----MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDR- 213
+ L VLGRARRF + + +PD V +T ++L R A V E + F R
Sbjct: 107 LDTALYVLGRARRFAHMWDLLRSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRL 166
Query: 214 -RKEFGELDDLSA--FQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
R G DD F LL LC+ K + A + + K EF + +T NI+L+GW
Sbjct: 167 SRMLRGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYEFKVNRQTFNILLSGW--- 223
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
+ +A+ F ++ + EPD VTY + ++ K + A +L M EK PDV+T
Sbjct: 224 KSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITY 283
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+I L + +A +L+EM GC P+V YN+ I++ KR+ + ++EM
Sbjct: 284 TSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMAS 343
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEV--PWVL-ERMERNGCKMSTDTYNVILKLYVNWDCE 447
K +PN T+N + ++ W L ERM GC +T + I++L
Sbjct: 344 KG--LMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRV 401
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ W +M G G V+ L D+G+L++A FH+M G P
Sbjct: 402 AQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKP 453
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 46/282 (16%)
Query: 269 VLGNVYEAKRFWKDIIKS--KCEPDSVTYATFVNALTKKGKLGTAL-------RLFQAMW 319
VLG W D+++S + PD+VT T + L + K+ + RL + +
Sbjct: 113 VLGRARRFAHMW-DLLRSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRLSRMLR 171
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEV------------------------------ 349
+G + N ++ LC +K + +A V
Sbjct: 172 GRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYEFKVNRQTFNILLSGWKSAEDAEA 231
Query: 350 -LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ EM+ G P++ TYNSLI CK + +E Y+ LDEM +K+ S P+ IT+ L+
Sbjct: 232 FVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDIS--PDVITYTSLIGG 289
Query: 409 LK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L +P++ +L+ M GC YN ++ +V EEM KG+ P+
Sbjct: 290 LGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPN 349
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
+Y + Y + A + MR +G P ++ + +
Sbjct: 350 ATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFI 391
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 78/188 (41%), Gaps = 8/188 (4%)
Query: 148 REGDYSPGSNVFNAI---LDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMV 204
RE D SP + ++ L ++G+ + L++ E+ + Y + + A +
Sbjct: 272 REKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRL 331
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET--FFESEKNEFGY-DIKTMN 261
+A + + G + + + + L + C Y ++ +E ++E + + ++
Sbjct: 332 GDAFALMEEMASKGLMPNATTYN--LFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCM 389
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I+ G V +A W D++ + ++ + L +GKL A R F M E
Sbjct: 390 FIVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIEL 449
Query: 322 GRKPDVVT 329
G+KP V
Sbjct: 450 GQKPSNVA 457
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 176/378 (46%), Gaps = 30/378 (7%)
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------ 182
+NR F A++ + + G + P + F ++ + + E + +FD+M
Sbjct: 109 LNRVGF----AFSVLAKILKLG-HQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFR 163
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EV 241
PD+V TYG L+N AI + + ++ A+ ++ LC+ + V E
Sbjct: 164 PDVV---TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
F E DI T N +++ C L +++ SK PD V++ T V+A
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDA 280
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K+GK+ A + M ++G +P+VVT ++D C + EA++V M +GC+PN
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER 421
V +YN+LI CKI+R++ Y M+ C N +E V +
Sbjct: 341 VISYNTLINGYCKIQRIDKAIHYTXLMDXX--CCYLNM-------------DEAVKVFDT 385
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M GC + +YN ++ Y DK + + EM ++ + PD +Y+ +IHGL R
Sbjct: 386 MVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVER 445
Query: 482 LEDALSYFHEMRLKGMVP 499
L+DA++ FHEM +P
Sbjct: 446 LQDAIALFHEMVACSQIP 463
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 167/376 (44%), Gaps = 28/376 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P + FN +L + + + L+ + +M N T IL+N + + V A V
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
+ + G D + F L+ +C + A F+ E F D+ T ++NG C
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+GN A R +++ C+P+ Y T +++L K ++ A LF M KG PD+ T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I ALC +L EM + +P+V ++N+++ LCK ++ ++ +D+M
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298
Query: 390 QKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
Q+ PN +T+ L+ L + +E V + M GC + +YN ++ Y
Sbjct: 299 QRGVE--PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 356
Query: 447 EDKVRH-------------------TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
DK H ++ M KG P+ SY +I+G R++ A+
Sbjct: 357 IDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMY 416
Query: 488 YFHEMRLKGMVPEPRT 503
F EM + ++P+ T
Sbjct: 417 LFGEMCRQELIPDTVT 432
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 8/301 (2%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMN 261
++ AI F+R F LL + + KH + + + FG +I T++
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSL-SHQMDSFGIPPNIYTLH 100
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I++N +C L V A I+K +PD+ T+ T + + +GK+G AL LF M +
Sbjct: 101 ILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGE 160
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G +PDVVT +I+ LC A+ +L M + C PNV YN++I LCK +++
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLERMERNGCKMSTDTYNVIL 438
+ EM K S P+ T+N L+ +L E V +L M + ++N ++
Sbjct: 221 FNLFSEMVTKGIS--PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ ++M ++G+ P+ +YT ++ G +++A+ F M KG +
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338
Query: 499 P 499
P
Sbjct: 339 P 339
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 168/374 (44%), Gaps = 38/374 (10%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE-- 205
P +N I+D L + R+ E +F EM PD+ TY L+ +A ++ E
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIF---TYNSLI--HALCNLCEWK 253
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIIL 264
+ + + + D+ +F ++ LC+ V A + + ++ T ++
Sbjct: 254 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALM 313
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL------------ 312
+G C+L + EA + + ++ C P+ ++Y T +N K ++ A+
Sbjct: 314 DGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCY 373
Query: 313 -------RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
++F M KG P+V++ N +I+ C +RI +A+ + EM + +P+ TY
Sbjct: 374 LNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTY 433
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERM 422
++LI LC ++R++ EM S +PN +T+ LL L K E +L+ +
Sbjct: 434 STLIHGLCHVERLQDAIALFHEMVA--CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI 491
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
E + N+ + + R + + KG+ PD +Y++MI+GL +G L
Sbjct: 492 EGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLL 551
Query: 483 EDALSYFHEMRLKG 496
++A F EM G
Sbjct: 552 DEASKLFREMDENG 565
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 34/247 (13%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P+ T +N+ ++G A + + + G +PD T +I +C + +I EAL +
Sbjct: 94 PNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHL 153
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+M G P+V TY +LI LCK+ L M QKN C PN +N ++ SL
Sbjct: 154 FDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN--CQPNVFAYNTIIDSL 211
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
K +V T+ +N+ + EM KG+ PD +Y
Sbjct: 212 CKDRQV---------------TEAFNL-----------------FSEMVTKGISPDIFTY 239
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTS 529
+IH L + + + +EM ++P+ + V D K + E V K+
Sbjct: 240 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 299
Query: 530 LGLKGNA 536
G++ N
Sbjct: 300 RGVEPNV 306
>gi|115451461|ref|NP_001049331.1| Os03g0208600 [Oryza sativa Japonica Group]
gi|26006498|gb|AAN77307.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108706773|gb|ABF94568.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547802|dbj|BAF11245.1| Os03g0208600 [Oryza sativa Japonica Group]
Length = 531
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 186/412 (45%), Gaps = 19/412 (4%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRF---DWEAAYTFFKWVSREGDYSPGSNV 158
+ T +E AL+ + ++ L+ V+ R+RF D A + +P
Sbjct: 53 AAPTPSAMESALSASGVAISAPLLDLVLRRFRFAHGDPLRALSLLSLALDRHGVAPSPFA 112
Query: 159 FNAILDVLGRARRFVELIQVFDE----MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDR- 213
+ L VLGRARRF + + +PD V +T ++L R A V E + F R
Sbjct: 113 LDTALYVLGRARRFAHMWDLLRSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRL 172
Query: 214 -RKEFGELDDLSA--FQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
R G DD F LL LC+ K + A + + K EF + +T NI+L+GW
Sbjct: 173 SRMLRGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYEFKVNRQTFNILLSGW--- 229
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
+ +A+ F ++ + EPD VTY + ++ K + A +L M EK PDV+T
Sbjct: 230 KSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITY 289
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+I L + +A +L+EM GC P+V YN+ I++ KR+ + ++EM
Sbjct: 290 TSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMAS 349
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEV--PWVL-ERMERNGCKMSTDTYNVILKLYVNWDCE 447
K +PN T+N + ++ W L ERM GC +T + I++L
Sbjct: 350 KG--LMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRV 407
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ W +M G G V+ L D+G+L++A FH+M G P
Sbjct: 408 AQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKP 459
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 46/282 (16%)
Query: 269 VLGNVYEAKRFWKDIIKS--KCEPDSVTYATFVNALTKKGKLGTAL-------RLFQAMW 319
VLG W D+++S + PD+VT T + L + K+ + RL + +
Sbjct: 119 VLGRARRFAHMW-DLLRSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRLSRMLR 177
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEV------------------------------ 349
+G + N ++ LC +K + +A V
Sbjct: 178 GRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYEFKVNRQTFNILLSGWKSAEDAEA 237
Query: 350 -LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ EM+ G P++ TYNSLI CK + +E Y+ LDEM +K+ S P+ IT+ L+
Sbjct: 238 FVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDIS--PDVITYTSLIGG 295
Query: 409 LK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L +P++ +L+ M GC YN ++ +V EEM KG+ P+
Sbjct: 296 LGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPN 355
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
+Y + Y + A + MR +G P ++ + +
Sbjct: 356 ATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFI 397
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 78/188 (41%), Gaps = 8/188 (4%)
Query: 148 REGDYSPGSNVFNAI---LDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMV 204
RE D SP + ++ L ++G+ + L++ E+ + Y + + A +
Sbjct: 278 REKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRL 337
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET--FFESEKNEFGY-DIKTMN 261
+A + + G + + + + L + C Y ++ +E ++E + + ++
Sbjct: 338 GDAFALMEEMASKGLMPNATTYN--LFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCM 395
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I+ G V +A W D++ + ++ + L +GKL A R F M E
Sbjct: 396 FIVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIEL 455
Query: 322 GRKPDVVT 329
G+KP V
Sbjct: 456 GQKPSNVA 463
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 178/362 (49%), Gaps = 15/362 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + + E + + + M PDLV TYG ++N
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV---TYGAVINGLCKRG 219
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
+ A+ + ++ ++ D+ + ++ LC+Y+HV+ A F E + D+ T +
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ C G +A R D+++ K P+ VT+ + ++A K+GKL A +LF M ++
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
P++VT N +I+ C R+ EA ++ M ++ CLP+V TYN+LI CK K++
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLERMERNGCKMSTDTYNVIL 438
E +M ++ + N +T+ L+ + + V ++M +G + TYN +L
Sbjct: 400 MELFRDMSRR--GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+K +E ++K M PD +Y +M G+ G++ED F + LKG+
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 499 PE 500
P+
Sbjct: 518 PD 519
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 161/376 (42%), Gaps = 52/376 (13%)
Query: 174 ELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
E + +F EM P +V + LL+ A + I ++ + G +L +
Sbjct: 48 EAVDLFGEMVKSRPFPSIVE---FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 228 NLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK- 285
++ LCR + A + K +G I T+N +LNG+C + EA +++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 286 ----------------------------------SKCEPDSVTYATFVNALTKKGKLGTA 311
C+PD VTY +N L K+G+ A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 312 LRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
L L M EKG+ + DVV + +ID+LC + + +AL + EM N+G P+V TY+SLI
Sbjct: 225 LNLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGC 427
LC R L +M ++ + PN +TFN L+ + K E + + M +
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKIN--PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ TYN ++ + D D+ + + M K PD +Y +I+G ++ D +
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 488 YFHEMRLKGMVPEPRT 503
F +M +G+V T
Sbjct: 402 LFRDMSRRGLVGNTVT 417
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 140/295 (47%), Gaps = 15/295 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P FN+++D + + +E ++FDEM P++V TY L+N + ++E
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV---TYNSLINGFCMHDRLDE 363
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILN 265
A +F L D+ + L+ C+ K V + E F + + + T +++
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ + A+ +K ++ P+ +TY T ++ L K GKL A+ +F+ + + +P
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T N + + +C ++ + ++ + +G P+V YN++I CK E Y
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Query: 386 DEMEQKNGSCLPNEITFNYLLKS-LKKPEEVPWVLERMERNGCKMSTD--TYNVI 437
+M++ LP+ T+N L+++ L+ ++ E C+ + D TY ++
Sbjct: 544 IKMKEDGP--LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 116/244 (47%), Gaps = 13/244 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF------DEMPDLVNEKT 190
EA F + + R D P +N++++ R E Q+F D +PD+V T
Sbjct: 328 EAEKLFDEMIQRSID--PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV---T 382
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y L+N + A V + + +F G + + + L+ + + A+ F+
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 251 NEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
++ + +I T N +L+G C G + +A ++ + KSK EPD TY + K GK+
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
LF ++ KG KPDV+ N +I C K EA + +MK G LP+ TYN+LI
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 370 K-HL 372
+ HL
Sbjct: 563 RAHL 566
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 92/233 (39%), Gaps = 36/233 (15%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
KL A+ LF M + P +V + ++ A+ K+ + +M+ G N+ TYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQ-------------KNGSC------------------ 395
+I LC+ ++ L +M + NG C
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 396 --LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
P+ +TF L+ L K E ++ERM GC+ TY ++ D
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +MEK + D Y+ +I L ++DAL+ F EM KG+ P+ T
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 169/357 (47%), Gaps = 10/357 (2%)
Query: 152 YSPGSNV-FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEA 207
+ P S V F IL + + +R+ ++ + +M N T +L+N + + V A
Sbjct: 69 HPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFA 128
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
V + + G D ++F L+ LC + A F+ E F D+ ++NG
Sbjct: 129 FSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLING 188
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G+ A R + + K C+PD V Y T +++L K + A LF M KG P+
Sbjct: 189 LCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPN 248
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+VTCN ++ ALC +L EM + +PN + +++ LCK + ++ +D
Sbjct: 249 IVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVD 308
Query: 387 EMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
M Q P+ +T+ L+ + +E V + M GC + +YN ++ Y
Sbjct: 309 MMFQSGVE--PDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCK 366
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ DK + +EEM ++ + P+ +Y +IHGL GRL+DA++ F EM G +P+
Sbjct: 367 IERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPD 423
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 185/401 (46%), Gaps = 25/401 (6%)
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------ 182
+NR F A++ + + G P + F ++ L + E + +FD+M
Sbjct: 122 LNRVNF----AFSVLAKILKLG-CQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQ 176
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR-YKHVEV 241
PD+V Y L+N AI + ++ D+ + L+ LC+ + +
Sbjct: 177 PDVV---IYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQA 233
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
F E +I T N ++ C LG +++ SK P++++ T V+A
Sbjct: 234 FNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDA 293
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K+G + A + M++ G +PDVVT +ID C + + EA++V M ++GC PN
Sbjct: 294 LCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPN 353
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V +YN+LI CKI+RM+ +EM ++ +PN +T+N L+ L + ++ +
Sbjct: 354 VFSYNTLINGYCKIERMDKAMYLFEEMCRQK--LIPNTVTYNTLIHGLCHVGRLQDAIAL 411
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCE-DKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
M G TY ++L Y+ +C DK + +E + PD + YT++I G+
Sbjct: 412 FREMVACGQIPDLVTYRILLD-YLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMC 470
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG 518
G LEDA F + KG+ P T N M L +RG
Sbjct: 471 RAGELEDARDLFSNLSSKGLKPNVWT---YNIMTHGLCKRG 508
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 144/309 (46%), Gaps = 8/309 (2%)
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG- 254
++Y + +++A+ F+R + F +L + + K + + + FG
Sbjct: 47 SKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSL-SRKMDSFGI 105
Query: 255 -YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
+++ T+N+++N +C L V A I+K C+PD+ ++ T + L +G++G AL
Sbjct: 106 PHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALH 165
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
LF M +G +PDVV +I+ LC A+ +LR M+ C P+V Y +LI LC
Sbjct: 166 LFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLC 225
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFN---YLLKSLKKPEEVPWVLERMERNGCKMS 430
K ++ + EM K S PN +T N Y L +L + + V +L M + +
Sbjct: 226 KDRQQTQAFNLFSEMITKGIS--PNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPN 283
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
+ ++ + + M + G+ PD +YT +I G + +++A+ F
Sbjct: 284 AISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFD 343
Query: 491 EMRLKGMVP 499
M KG P
Sbjct: 344 MMVHKGCAP 352
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 165/379 (43%), Gaps = 25/379 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A+ F + +G SP N+++ L + + + +EM D + N + ++
Sbjct: 233 AFNLFSEMITKG-ISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVV 291
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE------SE 249
+ MV +A V D + G D+ + L+ C ++ A F+
Sbjct: 292 DALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCA 351
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
N F Y N ++NG+C + + +A ++++ + K P++VTY T ++ L G+L
Sbjct: 352 PNVFSY-----NTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQ 406
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+ LF+ M G+ PD+VT ++D LC + +A+ +L+ ++ P++ Y +I
Sbjct: 407 DAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVI 466
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
+C+ +E + + K PN T+N + L K +E + M+ N
Sbjct: 467 DGMCRAGELEDARDLFSNLSSKGLK--PNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA 524
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
C TYN I + ++ + + EEM +G D + T+++ L D D L
Sbjct: 525 CSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSD-----DGL 579
Query: 487 SYFHEMRLKGMVPEPRTGI 505
+L+ M P R +
Sbjct: 580 DQSEAHKLEDMFPHLRIQV 598
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 178/369 (48%), Gaps = 17/369 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A ++F+ + + G P + ++ L +A ++ + Q+F+EM P+LV TY
Sbjct: 141 AASYFERMVQSGCL-PDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV---TYA 196
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
++N Y A +++A+ + R K G S + L+ LC++ + A FE +
Sbjct: 197 TVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGD 256
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D+ ++G C G + EAK +I++ C PD V+Y + +L K ++ A
Sbjct: 257 V-QDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAK 315
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC-LPNVTTYNSLIKH 371
L E+ P V C ++D LC +R+ EA +L M G P+V TY+++I
Sbjct: 316 ELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDG 375
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCK 428
LCK R++ Y L +M + C+P+ +T+ ++ + K +E + +RM GC
Sbjct: 376 LCKADRLDDAYVVLQKM--RRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCA 433
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+ YN++++ Y D+ EEM +G+ P+ S + ++ GL + R+E+A
Sbjct: 434 LDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLL 493
Query: 489 FHEMRLKGM 497
+M + +
Sbjct: 494 MEKMNFESL 502
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 174/412 (42%), Gaps = 39/412 (9%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF-DEMPDLV--NEKTYGILLNRY 198
FF+W + + N++L+V E +VF DE+ L ++ TYG L+ +
Sbjct: 3 FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGF 62
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDI 257
A + +A+ + K G + F +L+ LC + A + F + + D
Sbjct: 63 CKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDA 122
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
+++ C + + A +++ +++S C PD VTY V++L K K ++F+
Sbjct: 123 FLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEE 182
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M KG P++VT +++ C RI +AL ++R +K G P+ + Y++LI LCK R
Sbjct: 183 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 242
Query: 378 METVYEY--------------------------LDEMEQKN-----GSCLPNEITFNYLL 406
+ E LDE + + C P+ +++N ++
Sbjct: 243 HDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVII 302
Query: 407 KSLKKPEEVPWVLERMER---NGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGM 462
SL K V E M++ C V++ L + E+ +E
Sbjct: 303 YSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDR 362
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKL 514
P +Y+ +I GL RL+DA +MR G VP+ T + D K+
Sbjct: 363 APSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKV 414
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 118/249 (47%), Gaps = 14/249 (5%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
V+ + + L +A + E V +M PD V +Y +++ + V EA +
Sbjct: 262 VYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPV---SYNVIIYSLCKDNRVSEAKELM 318
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWCV 269
D+ E + + L+ LC+ + VE A E E + + T + +++G C
Sbjct: 319 DQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCK 378
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ +A + + ++ C PD VTY ++A K G+L A LFQ M E+G DVV
Sbjct: 379 ADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVA 438
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I C ++ EA+ ++ EM RG PNV + ++++ LCK R+E E ME
Sbjct: 439 YNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVE---EARLLME 495
Query: 390 QKNGSCLPN 398
+ N LP+
Sbjct: 496 KMNFESLPD 504
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 397 PNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
P++ T+ L++ K E++P +L M+ G + T+ +++ + DK
Sbjct: 50 PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI 109
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNI 512
+ +M + PD YTV+I L +L+ A SYF M G +P+ T +LV+ +
Sbjct: 110 FHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK 169
Query: 513 KLK-ERGEQ 520
K E+G Q
Sbjct: 170 ACKWEQGHQ 178
>gi|224123682|ref|XP_002319140.1| predicted protein [Populus trichocarpa]
gi|222857516|gb|EEE95063.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D V+YA+ ++ +K G L LRL++ M + G +PD N +I AL + + EA ++
Sbjct: 9 DVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFNLM 68
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL-PNEITFNYLLKSL 409
+ M+ +G PN+ TYNSLIK LC+ +++E D+M ++ C+ P T++ L+ L
Sbjct: 69 KTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKR---CISPTIRTYHAFLRIL 125
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+ EEV +LE+M + GC+ DTY ++++ + W + V W+EM + G+ PD+ SY
Sbjct: 126 RTGEEVFALLEKMRKMGCQPINDTYIMLIRKFCRWRQLENVFKLWDEMSENGISPDRSSY 185
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
V+IHGL+ G L+ A Y+ EM+ K ++PEP+
Sbjct: 186 IVLIHGLFLNGELDAAHKYYTEMKEKQLLPEPK 218
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 154 PGSNVFNAILDVLGRARRFVE---LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P V+NA++ L + R E L++ +E N TY L+ A VEEA G
Sbjct: 43 PDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGA 102
Query: 211 FD---RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL--- 264
FD +R + AF +L + E E + I I+L
Sbjct: 103 FDDMLKRCISPTIRTYHAFLRIL------RTGEEVFALLEKMRKMGCQPINDTYIMLIRK 156
Query: 265 -NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
W L NV+ + W ++ ++ PD +Y ++ L G+L A + + M EK
Sbjct: 157 FCRWRQLENVF---KLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYYTEMKEKQL 213
Query: 324 KPD 326
P+
Sbjct: 214 LPE 216
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M + G + +Y ++ Y +V +++M+K G+ PD++ Y +IH L KGR
Sbjct: 1 MSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHAL-AKGR 59
Query: 482 L-EDALSYFHEMRLKGMVP 499
L +A + M KG+ P
Sbjct: 60 LVNEAFNLMKTMEEKGVAP 78
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 169/369 (45%), Gaps = 9/369 (2%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMV 204
RE D P + I+ L + R +E I +F EM + N TY +++N +
Sbjct: 66 REDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKL 125
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNII 263
EE + D E G + + + L+ C+ VE A+ + N + +T N +
Sbjct: 126 EEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNEL 185
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G+C NV+ A +++S+ P VTY + ++ K G L +A RL M E G
Sbjct: 186 ICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGV 245
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD T + ID LC K RI EA + +K +G N Y +LI CK +M+
Sbjct: 246 VPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANS 305
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
LD M ++ CLPN T+N L+ L +K +E ++E M + G K + TY +++
Sbjct: 306 LLDRMLTED--CLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVA 363
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ D ++M G PD YT IH +G +++A M +G++P+
Sbjct: 364 MLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPD 423
Query: 501 PRTGILVND 509
T LV D
Sbjct: 424 ALTYTLVID 432
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 123/238 (51%), Gaps = 5/238 (2%)
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++G C +G V E +K + + C P TY V+AL + G+ A+ LF M E+G
Sbjct: 45 LIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERG 104
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+P++ T +I+A+C + ++ E +L EM +G +P+V TYN+LI CK +E
Sbjct: 105 CEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQ 164
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILK 439
E LD M SC PNE T+N L+ + + V +L +M + S TYN ++
Sbjct: 165 EILDLMHSN--SCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIH 222
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
D M + G+ PDQ +Y+V I L KGR+E+A F+ ++ KG+
Sbjct: 223 GQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGI 280
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 137/304 (45%), Gaps = 6/304 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNI 262
V A VF+ + G + ++ NL+ LC V+ F+ + + Y ++T +
Sbjct: 20 VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
I++ G EA + ++ + CEP+ TY +NA+ K+ KL R+ M EKG
Sbjct: 80 IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P V T N +ID C + + A E+L M + C PN TYN LI C+ K +
Sbjct: 140 LVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAM 199
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
L +M + + P+ +T+N L+ K + +L M NG TY+V +
Sbjct: 200 ALLSKMLESRLT--PSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFID 257
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++ + +++KG+ ++ YT +I G G+++DA S M + +P
Sbjct: 258 TLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP 317
Query: 500 EPRT 503
T
Sbjct: 318 NSST 321
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 27/288 (9%)
Query: 263 ILNGWCVLGNVYEAK---------RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
++NG+C LGN+ EA + + K C + V+Y ++ L + G++ +
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+F+ M E P V T I+ AL R EA+ + EM+ RGC PN+ TY +I +C
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMS 430
K ++E LDEM +K +P+ T+N L+ K E +L+ M N C +
Sbjct: 121 KETKLEEGRRILDEMVEK--GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPN 178
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TYN ++ + + +M + + P +Y +IHG G L+ A +
Sbjct: 179 ERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLN 238
Query: 491 EMRLKGMVPEPRTGILVNDMNIK-------------LKERGEQGKKVI 525
M G+VP+ T + D K LKE+G + +VI
Sbjct: 239 LMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVI 286
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 162/397 (40%), Gaps = 49/397 (12%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
++AY ++ G P ++ +D L + R E +F+ + + NE Y
Sbjct: 231 DSAYRLLNLMNENG-VVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTA 289
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNE 252
L++ Y A +++A + DR L + S + L+ LC+ + V+ A ES +
Sbjct: 290 LIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKG 349
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ T I++ G+ A R ++ S +PD Y F++A +G + A
Sbjct: 350 LKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAE 409
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ M+E+G PD +T +IDA + A +VL+ M + GC P+ TY+ LIKHL
Sbjct: 410 DMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469
Query: 373 C-----------------------------KIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
K+ + ET E ++M + C PN T+
Sbjct: 470 LKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEH--GCSPNINTYA 527
Query: 404 YLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCE-----DKVRHTWE 455
L+ L K + + + M G S YN +L N CE D VR
Sbjct: 528 KLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLL----NCCCELGIYGDAVRLVGA 583
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
ME G P S V+ GLY++G E A F +
Sbjct: 584 MME-HGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNL 619
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK--TMNI 262
E A+ +F++ E G +++ + L++ LC+ + VA+ F+ NE G N
Sbjct: 505 ETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFD-HMNERGVSPSEAIYNS 563
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+LN C LG +A R +++ P + L ++G A +F + + G
Sbjct: 564 LLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCG 623
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
D V +ID L E+L M+ RGC + TY LI+ L
Sbjct: 624 YNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 177/351 (50%), Gaps = 15/351 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+NAI+ L + E ++V +EM PD+ TY IL++ + VE+ + + +
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVY---TYSILIHGFCKQGDVEKGLYLIE 384
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLG 271
K L ++ +L LC+ + +++ + F + + YD +I++ G+C+ G
Sbjct: 385 EMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQG 444
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
++ A + ++++++ PD + + V+ K G AL F M E G P + TCN
Sbjct: 445 DLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCN 504
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
IIDA C + R+ EAL ++ EM+ +G PN+ TYN++I LCK ++ E E M ++
Sbjct: 505 VIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKR 564
Query: 392 NGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
N LP+ + ++ L+ K ++ + RM + G Y +++ + +
Sbjct: 565 N--VLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMC 622
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + +++M + GM PD+ SYT +I G G + A + F+EM +G +P
Sbjct: 623 EAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLP 673
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 146/310 (47%), Gaps = 10/310 (3%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D ++A+ + + R + +P + F +++ + +V ++ F+ M + L + T
Sbjct: 445 DLDSAHKLMEEMVR-NNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATC 503
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEK 250
++++ + VEEA+ + + + G +L + ++ LC+ + E A E F K
Sbjct: 504 NVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLK 563
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ + +++G+ N +A + ++K PD V Y +N L + ++
Sbjct: 564 RNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCE 623
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A LF+ M E G PD ++ +I C + +A + EM RG LP V TY SL+
Sbjct: 624 AYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVD 683
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGC 427
CK+ R++ +DEM++K + P+ +T+N L+ + ++ + LE M+ NG
Sbjct: 684 GYCKMNRIDIADMLIDEMKRKGIT--PDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGV 741
Query: 428 KMSTDTYNVI 437
TY ++
Sbjct: 742 LPDHMTYMML 751
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 142/357 (39%), Gaps = 65/357 (18%)
Query: 160 NAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKE 216
N +L L A R L +F+EM N TY I++N Y +
Sbjct: 218 NFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYC--------------KGN 263
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEA 276
FGE D + E E E+N + T + + G C +G V A
Sbjct: 264 FGEAD--------------IDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESA 309
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
F + +I + + Y ++ L KKG+L AL++ + M G PDV T + +I
Sbjct: 310 LDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHG 369
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
C + + + L ++ EMK P++ +Y+SL LCK KR+
Sbjct: 370 FCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCK-KRL------------------ 410
Query: 397 PNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
++I+ + + + G K Y++++K + D EE
Sbjct: 411 -SDISLD--------------IFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEE 455
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
M + + PD ++ ++HG G +AL +F+ M G++P T ++ D + +
Sbjct: 456 MVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCR 512
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 13/218 (5%)
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
+ + + L A+ +F + G + +CN ++ L R + E
Sbjct: 180 IVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEE 239
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMET------VYEYLDEMEQKNGSCLPNEITFNYLL 406
MK+ G PNV TY ++ CK E E L+EME+ S P +T++ +
Sbjct: 240 MKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGES--PTVVTYSTYI 297
Query: 407 KSLKK----PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
L + + +V + NG ++ YN I+ D+ EEM+ G+
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGL-VNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGI 356
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
PD +Y+++IHG +G +E L EM+ M P
Sbjct: 357 SPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPS 394
>gi|18396782|ref|NP_566222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|79312733|ref|NP_001030630.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546763|sp|Q9M8W9.2|PP211_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04130, mitochondrial; Flags: Precursor
gi|332640519|gb|AEE74040.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332640520|gb|AEE74041.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 195/457 (42%), Gaps = 79/457 (17%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
+ L+D L+ +++R+R DW +A KW + S+ ++ +D+LG+A+++ + +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 178 VFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+ M LV T ++ R+A A EEA+G+FDR EFG + + LL LC+
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW--------------- 280
K VE A K+ + T NI ++GWC V EA W
Sbjct: 203 EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA--LWTIQEMKGHGFRPCVI 260
Query: 281 --KDIIKSKCE--------------------PDSVTYATFVNALTKKGKLGTALRLFQAM 318
II+ C+ P+S+TY T +++L + + ALR+ M
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR-EMKNRGCLPNVTTYNSLIKHLCKIKR 377
G KPD + NC+I L R+ EA V R EM G N +TYNS+I C
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVI 437
+ E L EME N C P+ T+ LL+S K +V V +
Sbjct: 381 EDKAIELLKEMESSN-LCNPDVHTYQPLLRSCFKRGDVVEV----------------GKL 423
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
LK E + K + D+ +YT +I L E A F EM + +
Sbjct: 424 LK---------------EMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDI 468
Query: 498 VPEPRTGIL----VNDMNI-KLKERGEQGKKVIKLTS 529
P RT +L V N+ + ER E K +KLT+
Sbjct: 469 TPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLTA 505
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 177/418 (42%), Gaps = 64/418 (15%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
R+ + G F+++L L +A R E IQ+ MP + N + L+N A V+EA
Sbjct: 270 RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEA 329
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+FD KE G D+ + LL LC+ + + A E + G ++ T + ++
Sbjct: 330 FELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQ 389
Query: 266 GWCVLGNVYEA--------------------------------------------KRFWK 281
G C G V +A +R W+
Sbjct: 390 GLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWR 449
Query: 282 D-------------IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
++ C P VTY T V L+K G + AL L + M E G PDV+
Sbjct: 450 SSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVI 509
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N ++D LC ++RI +A V + RGC PNV TY++LI L K+ +M+ + L +M
Sbjct: 510 TFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKM 569
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ C N +T++ ++ L K E+ VL +M GC TYN ++ +
Sbjct: 570 VELG--CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQ 627
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ EM + G P +YT + HGL GR ++A+ M +G P T
Sbjct: 628 RLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 685
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 164/364 (45%), Gaps = 18/364 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R+ P + +N ++D + +R E + + EM P +V TY L + +
Sbjct: 605 RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV---TYTTLCHGLCRS 661
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE--FGYDIKT 259
+EA+ + D G + + +++ LC+ V A +FE + +
Sbjct: 662 GRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIA 721
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
+ +++G C G + EA F + +I++ PD VT++ +N L G++ T L LF M
Sbjct: 722 YSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMA 781
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
E+G K D+ N +I+A C K A +L EMK G N T+ +IK LC R++
Sbjct: 782 ERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRID 841
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNV 436
Y + + +EI++N L+ SL ++ E+ +L M +G Y
Sbjct: 842 EAVSYFHSIPED----CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMT 897
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ + +EM +G PD R+YT+MI GL +L A YF EM K
Sbjct: 898 VMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKN 957
Query: 497 MVPE 500
+ P+
Sbjct: 958 LKPD 961
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 166/355 (46%), Gaps = 16/355 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E SP FN++LD L + +R ++ VF P++V TY L++ +
Sbjct: 501 ESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVV---TYSTLIDGLSKMA 557
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMN 261
++EA+ + + E G + + ++ L + +E A ++ D T N
Sbjct: 558 KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYN 617
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++G+ + EA ++++++ P VTY T + L + G+ A+ + M +
Sbjct: 618 TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 677
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREM-KNRGCLPNVTTYNSLIKHLCKIKRMET 380
G P+ +T + I+D LC R+ EAL +M ++ P+V Y++LI LCK R++
Sbjct: 678 GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDE 737
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVI 437
YE+L+ M + +P+ +TF+ L+ L + LE M GCK YN +
Sbjct: 738 AYEFLERMIRAGR--IPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAM 795
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ Y EEM+ G+ + ++ ++I L R+++A+SYFH +
Sbjct: 796 INAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSI 850
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 168/397 (42%), Gaps = 37/397 (9%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A+T F+ + G + P ++ ++D L R + ++ +EM N TY L+
Sbjct: 20 AFTAFRKAIQFG-FRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLV 78
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFG 254
N +EA + +R G +L F ++ LC+ +E A E F
Sbjct: 79 NALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFV 138
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D++ ++L+ C LG V EA F++ ++ PD+VTY T V+ L K G+L A +
Sbjct: 139 PDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMV 198
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
Q + E P V T +D L + A E M G PN TY++LI LCK
Sbjct: 199 LQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCK 258
Query: 375 IKRMETVYEYLDEMEQKNG---------------------------SCLPNEITFNYLLK 407
+++ L + + G C+PN + FN L+
Sbjct: 259 AGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMN 318
Query: 408 SL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW-DCEDKVRHTWEEMEKKGMG 463
L ++ +E + + M+ +GC TYN++LK + RH +G
Sbjct: 319 GLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCS 378
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEM-RLKGMVP 499
P+ +++ +I GL + GR+ A + M ++G+ P
Sbjct: 379 PNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISP 415
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 134/260 (51%), Gaps = 7/260 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ T N +L+G C + +A +K ++ C P+ VTY+T ++ L+K K+ AL+L
Sbjct: 507 DVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLL 566
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M E G + + VT + ++D L R+ +A+ VLR+M++ GCLP+ TYN+LI K
Sbjct: 567 AKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKR 626
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTD 432
+R+ L EM + P+ +T+ L L + +E +L+ M GC +
Sbjct: 627 QRLREAVGLLREMLEAGFH--PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAI 684
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TY+ I+ + +E+M + + + P +Y+ +I GL GR+++A +
Sbjct: 685 TYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLER 744
Query: 492 MRLKGMVPEPRT-GILVNDM 510
M G +P+ T IL+N +
Sbjct: 745 MIRAGRIPDVVTFSILINGL 764
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 166/363 (45%), Gaps = 16/363 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A +F+ ++R+ +P ++A++D L +A R E + + M PD+V T+
Sbjct: 702 ALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVV---TFS 758
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
IL+N A ++ + +F E G D+ A+ ++ C A E K
Sbjct: 759 ILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTH 818
Query: 253 -FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T I++ C + EA ++ I C D ++Y T + +L + A
Sbjct: 819 GIAKNTVTHGIVIKALCGNDRIDEAVSYFHSI-PEDCR-DEISYNTLITSLVASRRSEQA 876
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE-ALEVLREMKNRGCLPNVTTYNSLIK 370
L L +AM G PD ++D L FK PE A ++L+EM++RG P++ TY +I
Sbjct: 877 LELLRAMVADGGSPDACNYMTVMDGL-FKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMIS 935
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMS 430
L K K++ +Y +EM +KN P+ I ++ L+ + K ++V + + +G + +
Sbjct: 936 GLSKAKQLPLACDYFEEMLRKNLK--PDAIVYSSLIDAFCKADKVDDAWKLLRSSGIEPT 993
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
Y+ ++ DK EM+ K P +T + +GR+++A+ +
Sbjct: 994 ITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVN 1053
Query: 491 EMR 493
+++
Sbjct: 1054 DLQ 1056
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 163/378 (43%), Gaps = 24/378 (6%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-------PDL 185
RFD A +++ G +P + +++I+D L +A R E + F++M P +
Sbjct: 663 RFD--EAVEILDYMAARG-CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 719
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ET 244
+ Y L++ A ++EA +R G + D+ F L+ LC ++ E
Sbjct: 720 I---AYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLEL 776
Query: 245 FFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
F + DI N ++N +C+ G A +++ ++VT+ + AL
Sbjct: 777 FCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCG 836
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
++ A+ F ++ E R D ++ N +I +L +R +ALE+LR M G P+
Sbjct: 837 NDRIDEAVSYFHSIPEDCR--DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACN 894
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV---LER 421
Y +++ L K E + L EM + S P+ T+ ++ L K +++P E
Sbjct: 895 YMTVMDGLFKAGSPEVAAKLLQEMRSRGHS--PDLRTYTIMISGLSKAKQLPLACDYFEE 952
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M R K Y+ ++ + DKV W+ + G+ P Y+ M+ L
Sbjct: 953 MLRKNLKPDAIVYSSLIDAFCK---ADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRG 1009
Query: 482 LEDALSYFHEMRLKGMVP 499
+ AL EM+ K P
Sbjct: 1010 TDKALEVIREMKSKNCEP 1027
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
VTY +N L K G++ A F+ + G +P VVT + +ID LC + + ++L E
Sbjct: 2 VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
M RGC PN TYN+L+ L R + + L+ M NG C P ITF ++K L K
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERM-AANG-CPPELITFGLIIKGLCKE 119
Query: 413 EEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
E+ V++ M G + + V+L D+ ++++ G PD +Y
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179
Query: 470 TVMIHGLYDKGRLEDA 485
M+ GLY GRLE A
Sbjct: 180 NTMVDGLYKAGRLEAA 195
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 5/248 (2%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N+++NG C G V +A ++ I+ P VTY+T ++ L + ++ +L + M
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
+G P+ VT N +++AL + R EA +L M GC P + T+ +IK LCK +
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYN 435
E + +DEM + +P+ LL + L + +E + +++ G TYN
Sbjct: 123 EAAFRVVDEMVDRG--FVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++ + + + + P ++T+ + GL G L A +F M
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240
Query: 496 GMVPEPRT 503
G+ P T
Sbjct: 241 GVSPNTVT 248
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 130/305 (42%), Gaps = 39/305 (12%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY +L+N A V +A F + +FG
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFG------------------------------- 31
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
F + T + +++G C V + + +++ C P++VTY T VNAL +G+
Sbjct: 32 ---FRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAK 88
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A L + M G P+++T II LC + I A V+ EM +RG +P+V + L+
Sbjct: 89 EAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLL 148
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
LC++ R++ + + ++ + P+ +T+N ++ L K E VL+ + +
Sbjct: 149 HALCELGRVDEAWFFFQQVLLIGFT--PDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESF 206
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ T+ + + ++ M + G+ P+ +Y +I GL G+L+ AL
Sbjct: 207 SSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIAL 266
Query: 487 SYFHE 491
+
Sbjct: 267 GLLRD 271
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 5/180 (2%)
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+VT N +I+ LC R+ +A R+ G P V TY+++I LC+ ++ + L+
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM + C PN +T+N L+ +L + +E +LERM NGC T+ +I+K
Sbjct: 61 EMAGRG--CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCK 118
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +EM +G PD +TV++H L + GR+++A +F ++ L G P+ T
Sbjct: 119 EGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVT 178
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 127/266 (47%), Gaps = 8/266 (3%)
Query: 128 VINRY--RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP-D 184
+IN Y + ++ AAY + + G + + ++ L R E + F +P D
Sbjct: 795 MINAYCLKGEFSAAYALLEEMKTHG-IAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED 853
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
+E +Y L+ A+ E+A+ + G D + ++ L + EVA
Sbjct: 854 CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAK 913
Query: 245 FFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
+ ++ D++T I+++G + A +++++++ +PD++ Y++ ++A
Sbjct: 914 LLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFC 973
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K K+ A +L ++ G +P + + ++D+LC + +ALEV+REMK++ C P +
Sbjct: 974 KADKVDDAWKLLRS---SGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIH 1030
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEME 389
+ SL R++ + +++++
Sbjct: 1031 IWTSLATAYVAEGRVDEAVKLVNDLQ 1056
>gi|222423065|dbj|BAH19514.1| AT3G04130 [Arabidopsis thaliana]
Length = 508
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 195/457 (42%), Gaps = 79/457 (17%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
+ L+D L+ +++R+R DW +A KW + S+ ++ +D+LG+A+++ + +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 178 VFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+ M LV T ++ R+A A EEA+G+FDR EFG + + LL LC+
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW--------------- 280
K VE A K+ + T NI ++GWC V EA W
Sbjct: 203 EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA--LWTIQEMKGHGFRPCVI 260
Query: 281 --KDIIKSKCE--------------------PDSVTYATFVNALTKKGKLGTALRLFQAM 318
II+ C+ P+S+TY T +++L + + ALR+ M
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR-EMKNRGCLPNVTTYNSLIKHLCKIKR 377
G KPD + NC+I L R+ EA V R EM G N +TYNS+I C
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVI 437
+ E L EME N C P+ T+ LL+S K +V V +
Sbjct: 381 EDKAIELLKEMESSN-LCNPDVHTYQPLLRSCFKRGDVVEV----------------GKL 423
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
LK E + K + D+ +YT +I L E A F EM + +
Sbjct: 424 LK---------------EMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDI 468
Query: 498 VPEPRTGIL----VNDMNI-KLKERGEQGKKVIKLTS 529
P RT +L V N+ + ER E K +KLT+
Sbjct: 469 TPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLTA 505
>gi|222624423|gb|EEE58555.1| hypothetical protein OsJ_09859 [Oryza sativa Japonica Group]
Length = 858
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 186/412 (45%), Gaps = 19/412 (4%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRF---DWEAAYTFFKWVSREGDYSPGSNV 158
+ T +E AL+ + ++ L+ V+ R+RF D A + +P
Sbjct: 53 AAPTPSAMESALSASGVAISAPLLDLVLRRFRFAHGDPLRALSLLSLALDRHGVAPSPFA 112
Query: 159 FNAILDVLGRARRFVELIQVFDE----MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDR- 213
+ L VLGRARRF + + +PD V +T ++L R A V E + F R
Sbjct: 113 LDTALYVLGRARRFAHMWDLLRSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRL 172
Query: 214 -RKEFGELDDLSA--FQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
R G DD F LL LC+ K + A + + K EF + +T NI+L+GW
Sbjct: 173 SRMLRGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYEFKVNRQTFNILLSGW--- 229
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
+ +A+ F ++ + EPD VTY + ++ K + A +L M EK PDV+T
Sbjct: 230 KSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITY 289
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+I L + +A +L+EM GC P+V YN+ I++ KR+ + ++EM
Sbjct: 290 TSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMAS 349
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEV--PWVL-ERMERNGCKMSTDTYNVILKLYVNWDCE 447
K +PN T+N + ++ W L ERM GC +T + I++L
Sbjct: 350 KG--LMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRV 407
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ W +M G G V+ L D+G+L++A FH+M G P
Sbjct: 408 AQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKP 459
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 46/282 (16%)
Query: 269 VLGNVYEAKRFWKDIIKS--KCEPDSVTYATFVNALTKKGKLGTAL-------RLFQAMW 319
VLG W D+++S + PD+VT T + L + K+ + RL + +
Sbjct: 119 VLGRARRFAHMW-DLLRSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRLSRMLR 177
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEV------------------------------ 349
+G + N ++ LC +K + +A V
Sbjct: 178 GRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYEFKVNRQTFNILLSGWKSAEDAEA 237
Query: 350 -LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ EM+ G P++ TYNSLI CK + +E Y+ LDEM +K+ S P+ IT+ L+
Sbjct: 238 FVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDIS--PDVITYTSLIGG 295
Query: 409 LK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L +P++ +L+ M GC YN ++ +V EEM KG+ P+
Sbjct: 296 LGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPN 355
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
+Y + Y + A + MR +G P ++ + +
Sbjct: 356 ATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFI 397
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 161/336 (47%), Gaps = 43/336 (12%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMN 261
+++A+ F R + F LL + + KH + + + FG D+ T+
Sbjct: 37 LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSL-SKKMDSFGIPPDVYTLT 95
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I++N +C L V A I+K +PD+ T+ T V L GK+G AL +F M +
Sbjct: 96 IVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGE 155
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G +P+VVT +++ LC +++ EAL + EM +G P++ TYNSLI LC + + V
Sbjct: 156 GFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHV 215
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKK--------------------PEEVPW---- 417
L+EM + +PN ++ N ++ +L K P+ V +
Sbjct: 216 TTLLNEMVKSK--IMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALM 273
Query: 418 --------------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
V + M RNGC + +YN ++ Y DK + +EEM ++ +
Sbjct: 274 DGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELI 333
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
P+ +Y+ +IHGL GRL+DA++ F+EM G +P
Sbjct: 334 PNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIP 369
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 197/425 (46%), Gaps = 33/425 (7%)
Query: 128 VINRY----RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM- 182
VIN + R D+ A + + + G + P + F ++ L + E + VFD+M
Sbjct: 97 VINSFCHLNRVDF--ALSVLAKILKLG-HQPDTATFTTLVRGLCVVGKIGEALDVFDKMV 153
Query: 183 -----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL---LLWLC 234
P++V TYG L+N + EA+ +F G D+ + +L L LC
Sbjct: 154 GEGFQPNVV---TYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLC 210
Query: 235 RYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+KHV E K++ ++ ++NI+++ C G V EA +I+ EPD VT
Sbjct: 211 EWKHV--TTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVT 268
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
YA ++ + ++ A+++F M G +VV+ N +I+ C +RI +A+ + EM
Sbjct: 269 YAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMC 328
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC--LPNEITFNYLLKSLKKP 412
+ +PN TY++LI LC + R++ +EM +C +PN +T++ LL L K
Sbjct: 329 RQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMV----ACGQIPNLVTYSILLDYLCKN 384
Query: 413 E---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
E +L+ +E + YN+ + + R + + +G+ PD ++
Sbjct: 385 HRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTH 444
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTS 529
+MI GL +G L++A F EM G + R G N + L + + + + L
Sbjct: 445 NIMIRGLCKRGLLDEASKLFREMDENGCL---RNGCTYNTITQGLLQNNKTSRAIQLLEE 501
Query: 530 LGLKG 534
+ +G
Sbjct: 502 MLARG 506
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 169/363 (46%), Gaps = 11/363 (3%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD 184
++N + + R EA F + +++ SP +N+++ L + + + +EM
Sbjct: 167 LMNGLCKDRQLTEALNLFSEMIAK--GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVK 224
Query: 185 ---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVE 240
+ N + I+++ V EA V D + G D+ + L+ C R + E
Sbjct: 225 SKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDE 284
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ F +N ++ + N ++NG+C + + +A ++++ + + P+++TY+T ++
Sbjct: 285 AVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIH 344
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L G+L A+ LF M G+ P++VT + ++D LC R+ EA+ +L+ ++ P
Sbjct: 345 GLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDP 404
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPW 417
+V YN I +C+ +E + + + P+ T N +++ L K +E
Sbjct: 405 DVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQ--PDVWTHNIMIRGLCKRGLLDEASK 462
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ M+ NGC + TYN I + + + + EEM +G D + +++ L
Sbjct: 463 LFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLS 522
Query: 478 DKG 480
D G
Sbjct: 523 DDG 525
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 165/337 (48%), Gaps = 11/337 (3%)
Query: 168 RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
RA F+ + PDLV T+ LLN Y + +E+AI +FD+ G ++ +
Sbjct: 136 RASCFLGKMMKLGFEPDLV---TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT 192
Query: 228 NLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
L+ LC+ +H+ A E F + N ++ T N ++ G C +G +A +D++K
Sbjct: 193 TLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR 252
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
+ EP+ +T+ ++A K GKL A L+ M + PDV T +I+ LC + EA
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
++ M+ GC PN Y +LI CK KR+E + EM QK + N IT+ L+
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK--GVVANTITYTVLI 370
Query: 407 KS---LKKPEEVPWVLERMERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGM 462
+ + +P+ V +M TYNV+L L N E K +E M K+ M
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE-KALMIFEYMRKREM 429
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +YT++I G+ G++EDA F + KGM P
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 139/303 (45%), Gaps = 8/303 (2%)
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNII 263
+A+ +F R L + F LL + + +V + FE + G + T NI+
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFE-QMQILGIPPLLCTCNIV 124
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ C+ A F ++K EPD VT+ + +N ++ A+ LF + G
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
KP+VVT +I LC + + A+E+ +M G PNV TYN+L+ LC+I R
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
L +M ++ PN ITF L+ + + K E + M + TY ++
Sbjct: 245 LLRDMMKRRIE--PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ D+ R + ME+ G P++ YT +IHG R+ED + F+EM KG+V
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 501 PRT 503
T
Sbjct: 363 TIT 365
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 163/372 (43%), Gaps = 19/372 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILL 195
W A++ ++ + R G ++ FN LD+ R L + D + LL
Sbjct: 44 WIRAFSSYRKILRNGLHNLQ---FNDALDLFTRMVHSRPLPSIID----------FTRLL 90
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFG 254
+ A + + I +F++ + G L ++ +C A F + K F
Sbjct: 91 SVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFE 150
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ T +LNG+C + +A + I+ +P+ VTY T + L K L A+ L
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M G +P+VVT N ++ LC R +A +LR+M R PNV T+ +LI K
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMST 431
+ ++ E + M Q S P+ T+ L+ L +E + MERNGC +
Sbjct: 271 VGKLMEAKELYNVMIQM--SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
Y ++ + + + EM +KG+ + +YTV+I G GR + A F++
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 492 MRLKGMVPEPRT 503
M + P+ RT
Sbjct: 389 MSSRRAPPDIRT 400
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 1/180 (0%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
NE Y L++ + + VE+ + +F + G + + + L+ C +VA E F
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ DI+T N++L+G C G V +A ++ + K + + + VTY + + K
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK+ A LF +++ KG KP+V+T +I C + I EA + ++MK G LPN + Y
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 12/256 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P F A++D + + +E ++++ M PD+ TYG L+N +++EA
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF---TYGSLINGLCMYGLLDEA 312
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNG 266
+F + G + + L+ C+ K VE + F+E + + T +++ G
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C++G A+ + + + PD TY ++ L GK+ AL +F+ M ++ +
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+VT II +C ++ +A ++ + ++G PNV TY ++I C+ +
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Query: 387 EMEQKNGSCLPNEITF 402
+M K LPNE +
Sbjct: 493 KM--KEDGFLPNESVY 506
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 151/298 (50%), Gaps = 6/298 (2%)
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILN 265
I +F + + G DL L+ C H+ +A + F + K F + T+N ++
Sbjct: 76 VISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIK 135
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G + +A F ++ + D V+Y T +N L K G+ RL + + KP
Sbjct: 136 GLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKP 195
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DVV N II++LC K + +A +V EM +G P+V TY +LI C + ++ + L
Sbjct: 196 DVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLL 255
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+EM+ KN + PN TFN L+ +L K +E +L M + K TYN ++ Y
Sbjct: 256 NEMKLKNIN--PNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYF 313
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D ++ + M ++G+ PD + YT MI+GL +++A+S F EM+ K M+P+
Sbjct: 314 LVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPD 371
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 155/389 (39%), Gaps = 52/389 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + FN IL L + + +I +F + PDL T IL+N + + A
Sbjct: 55 PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLC---TLSILINCFCHQAHITLA 111
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
VF + G + L+ LC ++ A F + + F D + ++NG
Sbjct: 112 FSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLING 171
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G R + + +PD V Y T +N+L K LG A ++ M KG PD
Sbjct: 172 LCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPD 231
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT +I C + EA +L EMK + PNV T+N LI L K +M+ L
Sbjct: 232 VVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLA 291
Query: 387 EMEQKNGSCL-PNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYV 442
M + +C+ P+ T+N L+ +EV +V M + G Y ++
Sbjct: 292 VMMK---ACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLC 348
Query: 443 NWDCEDKVRHTWEEMEKK-----------------------------------GMGPDQR 467
D+ +EEM+ K G+ PD
Sbjct: 349 KTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVY 408
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
SYT+++ GL GRLEDA F + KG
Sbjct: 409 SYTILLDGLCKSGRLEDAKEIFQRLLAKG 437
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 149/322 (46%), Gaps = 9/322 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V Y ++N ++ +A V+ G D+ + L+ C H++ A
Sbjct: 195 PDVV---MYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEA 251
Query: 243 ETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ E + ++ T NI+++ G + EAK ++K+ +PD TY + ++
Sbjct: 252 FSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDG 311
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
++ A +F +M ++G PDV +I+ LC K + EA+ + EMK++ +P+
Sbjct: 312 YFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPD 371
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWV 418
+ TYNSLI LCK +E M+++ P+ ++ LL L K E+ +
Sbjct: 372 IVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQ--PDVYSYTILLDGLCKSGRLEDAKEI 429
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+R+ G ++ Y V++ D+ +ME KG PD ++ ++I L++
Sbjct: 430 FQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFE 489
Query: 479 KGRLEDALSYFHEMRLKGMVPE 500
K + A EM +G++ E
Sbjct: 490 KDENDKAEKILREMIARGLLKE 511
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 168/397 (42%), Gaps = 40/397 (10%)
Query: 91 AINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
AI + ++K + +GEI+KAL D L V ++ D + T + + G
Sbjct: 127 AITLNTLIK--GLCFRGEIKKAL-----YFHDQL---VAQGFQLDQVSYGTLINGLCKTG 176
Query: 151 D---------------YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
+ P ++N I++ L + + + V+ EM PD+V
Sbjct: 177 ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV--- 233
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY L++ + ++EA + + K ++ F L+ L + ++ A+
Sbjct: 234 TYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVM 293
Query: 250 -KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
K D+ T N +++G+ ++ V AK + + + PD Y +N L K +
Sbjct: 294 MKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMV 353
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A+ LF+ M K PD+VT N +ID LC + A+ + + MK +G P+V +Y L
Sbjct: 354 DEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTIL 413
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERN 425
+ LCK R+E E + K N + L+ L K +E + +ME
Sbjct: 414 LDGLCKSGRLEDAKEIFQRLLAKGYHL--NVHAYTVLINRLCKAGFFDEALDLKSKMEDK 471
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
GC T+++I++ D DK EM +G+
Sbjct: 472 GCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 19/240 (7%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P + + +++L T + LF+ G PD+ T + +I+ C + I A V
Sbjct: 55 PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+ RG PN T N+LIK LC ++ + D++ + +++++ L+ L
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL--DQVSYGTLINGL 172
Query: 410 KKPEE---VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR----HTWEEMEKKGM 462
K E V +L ++E + K YN I +N C++K+ + EM KG+
Sbjct: 173 CKTGETKAVARLLRKLEGHSVKPDVVMYNTI----INSLCKNKLLGDACDVYSEMIVKGI 228
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
PD +YT +IHG G L++A S +EM+LK + P V NI + ++GK
Sbjct: 229 SPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPN------VCTFNILIDALSKEGK 282
>gi|7340725|emb|CAB82968.1| putative protein [Arabidopsis thaliana]
Length = 308
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 131/248 (52%), Gaps = 5/248 (2%)
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
F ++ T ++LNGWC + N+ EA R W D+I +PD V + + L + K A+
Sbjct: 3 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 62
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+LF M KG P+V + +I C + + A+E +M + G P+ Y LI
Sbjct: 63 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 122
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
K+++TVYE L EM++K P+ T+N L+K + K PE + +M +N +
Sbjct: 123 GTQKKLDTVYELLKEMQEKGHP--PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 180
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
S T+N+I+K Y + R W+EM KKG+ PD SYTV+I GL +G+ +A Y
Sbjct: 181 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 240
Query: 490 HEMRLKGM 497
EM KGM
Sbjct: 241 EEMLDKGM 248
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 6/253 (2%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N TY +LLN + + EA +++ + G D+ A +L L R A F
Sbjct: 6 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 65
Query: 247 ESEKNEFG-YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
K++ ++++ I++ +C ++ A ++ D++ S +PD+ Y + +
Sbjct: 66 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 125
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
KL T L + M EKG PD T N +I + +K + +M P++ T+
Sbjct: 126 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTF 185
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
N ++K + E DEM +K G C P++ ++ L++ L K E LE M
Sbjct: 186 NMIMKSYFVARNYEMGRAVWDEMIKK-GIC-PDDNSYTVLIRGLISEGKSREACRYLEEM 243
Query: 423 ERNGCKMSTDTYN 435
G K YN
Sbjct: 244 LDKGMKTPLIDYN 256
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 4/160 (2%)
Query: 176 IQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
I+ FD+M D + Y L+ + ++ + +E G D + L+
Sbjct: 97 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 156
Query: 233 LCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
+ K E + +NE I T N+I+ + V N + W ++IK PD
Sbjct: 157 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 216
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+Y + L +GK A R + M +KG K ++ N
Sbjct: 217 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 256
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN--GSCLPNEITFNYLLKSLKKPEEVPW 417
PN+ TY L+ C+++ + ++M + + + LL+S+KK + +
Sbjct: 5 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK- 63
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ M+ G + +Y ++++ + + +++M G+ PD YT +I G
Sbjct: 64 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 123
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM-NIKLKERG 518
+ +L+ EM+ KG P+ +T L+ M N K+ E G
Sbjct: 124 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 166
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 182/375 (48%), Gaps = 18/375 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F +SR G P F++++ VL R + + F EM PD V Y
Sbjct: 381 AQEIFDEMSRRG-VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV---IYT 436
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
IL++ + + +A+ + D G D+ + L LC+ K A+ F +E E
Sbjct: 437 ILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLF-NEMVE 495
Query: 253 FGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
G D T ++ G+C GN+ +A ++ ++++ +PD VTY T ++ K G++G
Sbjct: 496 RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGR 555
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L+ M K PD ++ +++ C +PEAL + +M +G PN+ T N+LIK
Sbjct: 556 AKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIK 615
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGC 427
C+ M YEYL +M NG +P+ ++N L+ K E+ ++ ME+ G
Sbjct: 616 GYCRSGDMPKAYEYLSKM-ISNG-IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ + TYN+IL + + +M + G+ PD +Y+ +I+G + +++A
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFR 733
Query: 488 YFHEMRLKGMVPEPR 502
+ EM +G+VP+ R
Sbjct: 734 FHDEMLQRGLVPDDR 748
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 173/407 (42%), Gaps = 41/407 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
E A+ S G PG +NAIL L + ++ V EM L N TY
Sbjct: 309 EEAFQLLNSFSSRG-MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNE 252
LL + EA +FD G L DL +F +L+ L R H+ A F E E++
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D I+++G+C G + +A + +++ C D VTY TF+N L KK A
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
LF M E+G PD T +I C + +AL + M P+ TYN+LI
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547
Query: 373 CKIKRMETVYEYLDEMEQK-------------NGSCL--------------------PNE 399
CK M E D+M +K NG C PN
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607
Query: 400 ITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
+T N L+K + ++P L +M NG + +YN ++ Y+ +K E
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINE 667
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
MEK+G+ + +Y ++++G +G++++A +M G+ P+ T
Sbjct: 668 MEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGAT 714
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 168/387 (43%), Gaps = 50/387 (12%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA----- 207
N +++ L + R+F ++ +M D+V TY L+N Y +VEEA
Sbjct: 260 LNIMVNALCKDRKFENVMFFLSDMEGKGVFADIV---TYNTLINAYCREGLVEEAFQLLN 316
Query: 208 -----------------------IGVFDRRK-------EFGELDDLSAFQNLLLWLCRYK 237
IG +DR K + G + + + LL+ +CR
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376
Query: 238 HV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
++ E E F E + D+ + + ++ G++Y+A ++++ +S PD+V Y
Sbjct: 377 NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYT 436
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
++ + G L AL++ M +G DVVT N ++ LC KK +A + EM R
Sbjct: 437 ILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER 496
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP 416
G +P+ T+ +LI+ CK M+ + M + N P+++T+N L+ K E+
Sbjct: 497 GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK--PDKVTYNTLIDGFCKAGEMG 554
Query: 417 WVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
E M R +Y +L + + + + ++M +KG+ P+ + +I
Sbjct: 555 RAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLI 614
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPE 500
G G + A Y +M G++P+
Sbjct: 615 KGYCRSGDMPKAYEYLSKMISNGIIPD 641
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 98/245 (40%), Gaps = 36/245 (14%)
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+ Y V + KL FQ + KG + CN ++ L + A E+
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK-------------NGSCL-- 396
E+ G NV T N ++ LCK ++ E V +L +ME K N C
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 397 ------------------PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN 435
P +T+N +L L K + VL M + G + TYN
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+L D + + ++EM ++G+ PD S++ +I L G L AL +F EM
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426
Query: 496 GMVPE 500
G+VP+
Sbjct: 427 GIVPD 431
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 182/375 (48%), Gaps = 18/375 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F +SR G P F++++ VL R + + F EM PD V Y
Sbjct: 381 AQEIFDEMSRRG-VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV---IYT 436
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
IL++ + + +A+ + D G D+ + L LC+ K A+ F +E E
Sbjct: 437 ILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLF-NEMVE 495
Query: 253 FGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
G D T ++ G+C GN+ +A ++ ++++ +PD VTY T ++ K G++G
Sbjct: 496 RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGR 555
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L+ M K PD ++ +++ C +PEAL + +M +G PN+ T N+LIK
Sbjct: 556 AKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIK 615
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGC 427
C+ M YEYL +M NG +P+ ++N L+ K E+ ++ ME+ G
Sbjct: 616 GYCRSGDMPKAYEYLSKM-ISNG-IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ + TYN+IL + + +M + G+ PD +Y+ +I+G + +++A
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFR 733
Query: 488 YFHEMRLKGMVPEPR 502
+ EM +G+VP+ R
Sbjct: 734 FHDEMLQRGLVPDDR 748
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 173/407 (42%), Gaps = 41/407 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
E A+ S G PG +NAIL L + ++ V EM L N TY
Sbjct: 309 EEAFQLLNSFSSRG-MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNE 252
LL + EA +FD G L DL +F +L+ L R H+ A F E E++
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D I+++G+C G + +A + +++ C D VTY TF+N L KK A
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
LF M E+G PD T +I C + +AL + M P+ TYN+LI
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547
Query: 373 CKIKRMETVYEYLDEMEQK-------------NGSCL--------------------PNE 399
CK M E D+M +K NG C PN
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607
Query: 400 ITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
+T N L+K + ++P L +M NG + +YN ++ Y+ +K E
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINE 667
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
MEK+G+ + +Y ++++G +G++++A +M G+ P+ T
Sbjct: 668 MEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGAT 714
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 168/387 (43%), Gaps = 50/387 (12%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA----- 207
N +++ L + R+F ++ +M D+V TY L+N Y +VEEA
Sbjct: 260 LNIMVNALCKDRKFENVMFFLSDMEGKGVFADIV---TYNTLINAYCREGLVEEAFQLLN 316
Query: 208 -----------------------IGVFDRRK-------EFGELDDLSAFQNLLLWLCRYK 237
IG +DR K + G + + + LL+ +CR
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376
Query: 238 HV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
++ E E F E + D+ + + ++ G++Y+A ++++ +S PD+V Y
Sbjct: 377 NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYT 436
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
++ + G L AL++ M +G DVVT N ++ LC KK +A + EM R
Sbjct: 437 ILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER 496
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP 416
G +P+ T+ +LI+ CK M+ + M + N P+++T+N L+ K E+
Sbjct: 497 GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK--PDKVTYNTLIDGFCKAGEMG 554
Query: 417 WVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
E M R +Y +L + + + + ++M +KG+ P+ + +I
Sbjct: 555 RAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLI 614
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPE 500
G G + A Y +M G++P+
Sbjct: 615 KGYCRSGDMPKAYEYLSKMISNGIIPD 641
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 98/245 (40%), Gaps = 36/245 (14%)
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+ Y V + KL FQ + KG + CN ++ L + A E+
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK-------------NGSCL-- 396
E+ G NV T N ++ LCK ++ E V +L +ME K N C
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 397 ------------------PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN 435
P +T+N +L L K + VL M + G + TYN
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+L D + + ++EM ++G+ PD S++ +I L G L AL +F EM
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426
Query: 496 GMVPE 500
G+VP+
Sbjct: 427 GIVPD 431
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 185/374 (49%), Gaps = 12/374 (3%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP + F ++D+L + F V+ ++ ++ Y +L+ + + ++ A+
Sbjct: 62 SPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAME 121
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWC 268
+F K G D + L+ L + V+ A +FF++ + +I T N++++ +
Sbjct: 122 MFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFR 181
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+G + A + ++ + +P VTY ++AL G++G A +LF M G PD
Sbjct: 182 KVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSY 241
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T + +++ L R+ EA +V REM +RG ++ YNSL+ L K M+ V++ + EM
Sbjct: 242 TYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEM 301
Query: 389 EQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+K P+ +FN ++ +L KP+ V RM +GCK +YN+++ Y +
Sbjct: 302 SRKGFH--PDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFG 359
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
+ R EEM + G P+ ++Y +IH L G++++A + EM G P+ T
Sbjct: 360 DAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYN 419
Query: 506 LVNDMNIKLKERGE 519
+ DM L +RGE
Sbjct: 420 RLMDM---LGKRGE 430
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 171/384 (44%), Gaps = 50/384 (13%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
+N ++ GR+ + +++F EM PD E TYG L+N A V+EA F
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPD---EYTYGFLVNALGKAGRVQEARSFF 158
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVL 270
D E G ++ + L+ + +++A F E ++ F + T NI+L+ C
Sbjct: 159 DAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSA 218
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM------------ 318
G V A++ + + C PDS TY+T VN L K G++ A ++F+ M
Sbjct: 219 GRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNY 278
Query: 319 ----------------WE-------KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
W+ KG PD + N I+DAL + A EV M
Sbjct: 279 NSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVE 338
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KP 412
GC P++ +YN LI + + L+EM + +P T+N L+ L +
Sbjct: 339 SGCKPDLISYNILIDSYARFGDAAQARQMLEEMVE--AGFIPETKTYNSLIHWLATDGQV 396
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+E VLE ME GC+ TYN ++ + + +++M+ KG+ PD SY V
Sbjct: 397 DEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVR 456
Query: 473 IHGLYDKGRLEDALSYFHEMRLKG 496
I GL RL++AL F +M+ G
Sbjct: 457 IDGLAFDDRLDEALVLFKDMKAVG 480
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 94/240 (39%), Gaps = 37/240 (15%)
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
M ++L W +L + + K+++ T + A + K G A LF
Sbjct: 1 MLVVLASWGILDPL---ETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAE 57
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
P V +ID L A V +++ +GC + YN LI++ + +++
Sbjct: 58 SFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLD 117
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILK 439
+ E EM+ K P+E T+ +L+ +L K V
Sbjct: 118 SAMEMFREMKIKGSE--PDEYTYGFLVNALGKAGRV------------------------ 151
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ R ++ M ++G+ P+ +Y +++ G+L+ AL F EM+ +G P
Sbjct: 152 --------QEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQP 203
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 159/352 (45%), Gaps = 12/352 (3%)
Query: 153 SPGSNVFNAIL--DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
SP S+ ++ D L A R VE E PD+ L+ +A V
Sbjct: 36 SPASSRLRRLIARDDLAEAARLVERSTSRGEAPDVY---LCTKLIRNLCRRGRTSDAARV 92
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
+ G D+ A+ L+ CRY ++ A S D T ++ G C
Sbjct: 93 LRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP--VPPDAYTYTPLIRGLCDR 150
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G V +A D+++ +C+P VTY + A+ K G A+++ M KG P++VT
Sbjct: 151 GRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTY 210
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N II+ +C + R+ +A ++L + + G P+ +Y +++K LC KR E V EM +
Sbjct: 211 NVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVE 270
Query: 391 KNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
N C+PNE+TF+ L++ + E VL+RM +GC +T N+++
Sbjct: 271 NN--CVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRV 328
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D M G PD SYT ++ GL GR EDA +EM K P
Sbjct: 329 DDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPP 380
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 189/382 (49%), Gaps = 19/382 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAI 208
+ P + + +L L A+R+ ++ +F EM + + NE T+ +L+ + MVE AI
Sbjct: 238 FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAI 297
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN--IILNG 266
V DR E G + + ++ +C+ V+ A F + +G T++ +L G
Sbjct: 298 EVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNN-MGSYGCSPDTISYTTVLKG 356
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G +AK ++++ C P+ VT+ TF+ L +KG + A+ L + M E G
Sbjct: 357 LCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVG 416
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+VT N +++ C + R+ ALE+ + C PN TY +L+ LC +R++ E L
Sbjct: 417 IVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLA 473
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM Q + C N +TFN L+ + EE ++++M +GC + T+N +L +
Sbjct: 474 EMMQND--CPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLD-GIT 530
Query: 444 WDC-EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
DC ++ + KG+ D +Y+ ++ L + R+E+A+ FH ++ GM P+
Sbjct: 531 EDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPK-- 588
Query: 503 TGILVNDMNIKLKERGEQGKKV 524
++ N + L +R E + +
Sbjct: 589 -AVMYNKILSALCKRCETDRAI 609
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 166/389 (42%), Gaps = 53/389 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +L+ + ++ F + ++V DEM P++V TY +++N V++A
Sbjct: 170 PSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIV---TYNVIINGMCREDRVDDA 226
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF------ESEKNEFGYDI---- 257
+ +R +G D ++ +L LC K E E F NE +D+
Sbjct: 227 RQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRF 286
Query: 258 --------------------------KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
NI++N C G V +A F ++ C PD
Sbjct: 287 FCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPD 346
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+++Y T + L + G+ A L M K P+ VT N I LC K I +A+ ++
Sbjct: 347 TISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIE 406
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+M GC + TYN+L+ C R+++ E + + C PN IT+ LL L
Sbjct: 407 QMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL-----PCEPNTITYTTLLTGLCH 461
Query: 412 PEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
E + +L M +N C ++ T+NV++ + ++ ++M + G P+ +
Sbjct: 462 AERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLIT 521
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ ++ G+ + E+AL H + KG+
Sbjct: 522 FNTLLDGITEDCNSEEALELLHGLVSKGI 550
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 166/389 (42%), Gaps = 49/389 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + + ++ L R + + + D+M P +V TY +LL + +A
Sbjct: 135 PDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVV---TYTVLLEAVCKSSGFGQA 191
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+ V D + G ++ + ++ +CR V+ A + + +G+ D + +L
Sbjct: 192 MKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQIL-NRLSSYGFQPDTVSYTTVLK 250
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C + + + +++++ C P+ VT+ V + G + A+ + M E G
Sbjct: 251 GLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTA 310
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ CN +I+++C + R+ +A E L M + GC P+ +Y +++K LC+ R E E L
Sbjct: 311 NTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELL 370
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKM------------- 429
+EM +KN C PNE+TFN + L + ++ ++E+M GC +
Sbjct: 371 NEMVRKN--CPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFC 428
Query: 430 -------------------STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+T TY +L + + D EM + + ++
Sbjct: 429 VQGRVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFN 488
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
V++ KG +E+A+ +M G P
Sbjct: 489 VLVSFFCQKGFVEEAIELVQQMMEHGCTP 517
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 143/298 (47%), Gaps = 13/298 (4%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYG 192
WE A + R+ + P FN + +L + + I + ++MP+ V TY
Sbjct: 363 WEDAKELLNEMVRK-NCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYN 421
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
L+N + V+ A+ +F+ E + ++ + LL LC + ++ A E E +N
Sbjct: 422 ALVNGFCVQGRVDSALELFNSLP--CEPNTIT-YTTLLTGLCHAERLDAAAELLAEMMQN 478
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ ++ T N++++ +C G V EA + +++ C P+ +T+ T ++ +T+ A
Sbjct: 479 DCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEA 538
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L L + KG D +T + I+D L + RI EA+++ +++ G P YN ++
Sbjct: 539 LELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSA 598
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
LCK + ++ M + SC+PNE T+ L++ L + +E +VL + G
Sbjct: 599 LCKRCETDRAIDFFAHM--VSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRG 654
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 73/196 (37%), Gaps = 37/196 (18%)
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ + EA ++ +RG P+V LI++LC+ R
Sbjct: 48 RDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTS-------------------- 87
Query: 400 ITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
+ VL E +G + YN ++ Y + D R M
Sbjct: 88 --------------DAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP- 132
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
+ PD +YT +I GL D+GR+ DALS +M + P T ++ + K G+
Sbjct: 133 --VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQ 190
Query: 520 QGKKVIKLTSLGLKGN 535
K + ++ + G N
Sbjct: 191 AMKVLDEMRAKGCTPN 206
>gi|6721172|gb|AAF26800.1|AC016829_24 hypothetical protein [Arabidopsis thaliana]
Length = 572
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 195/457 (42%), Gaps = 79/457 (17%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
+ L+D L+ +++R+R DW +A KW + S+ ++ +D+LG+A+++ + +
Sbjct: 147 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 206
Query: 178 VFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+ M LV T ++ R+A A EEA+G+FDR EFG + + LL LC+
Sbjct: 207 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 266
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW--------------- 280
K VE A K+ + T NI ++GWC V EA W
Sbjct: 267 EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA--LWTIQEMKGHGFRPCVI 324
Query: 281 --KDIIKSKCE--------------------PDSVTYATFVNALTKKGKLGTALRLFQAM 318
II+ C+ P+S+TY T +++L + + ALR+ M
Sbjct: 325 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 384
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR-EMKNRGCLPNVTTYNSLIKHLCKIKR 377
G KPD + NC+I L R+ EA V R EM G N +TYNS+I C
Sbjct: 385 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 444
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVI 437
+ E L EME N C P+ T+ LL+S K +V V +
Sbjct: 445 EDKAIELLKEMESSN-LCNPDVHTYQPLLRSCFKRGDVVEV----------------GKL 487
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
LK E + K + D+ +YT +I L E A F EM + +
Sbjct: 488 LK---------------EMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDI 532
Query: 498 VPEPRTGIL----VNDMNI-KLKERGEQGKKVIKLTS 529
P RT +L V N+ + ER E K +KLT+
Sbjct: 533 TPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLTA 569
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 187/407 (45%), Gaps = 48/407 (11%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILD---VLGRARRFVELIQVFDEMPDLVNEKTY 191
+ E F ++++ +G SP A++ +GR + +++ + +E +++ +Y
Sbjct: 94 ELEEGSRFLEYMTNKGK-SPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSY 152
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR---------------- 235
+L++ Y + +EEA+ V DR G + + + +L LC
Sbjct: 153 NVLISGYCKSGEIEEALRVLDR---MGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQ 209
Query: 236 ---YKHVEVAETFFESEKNEFGY-----------------DIKTMNIILNGWCVLGNVYE 275
Y V ++ E G D+ T N+++ G+C G + E
Sbjct: 210 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A RF K + C+PD +++ + +L G+ A++L M KG P VVT N +I+
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN 329
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
LC K + +AL VL M G PN ++N LI+ C K ++ EYL+ M + C
Sbjct: 330 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRG--C 387
Query: 396 LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+ +T+N LL +L K ++ +L ++ GC S +YN ++ + +
Sbjct: 388 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVE 447
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
EEM KG+ PD + T ++ GL +G++ +A+ +FH ++ + P
Sbjct: 448 LLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRP 494
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 156/321 (48%), Gaps = 12/321 (3%)
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEA 276
G+ D+ A L+ C+ + A E++ D+ + N++++G+C G + EA
Sbjct: 109 GKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA 168
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
R + S P++ TY + +L +GKL A+++ + PDVVTC +IDA
Sbjct: 169 LRVLDRMGVS---PNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDA 225
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
C + + +A+++ EM+N+GC P+V TYN LIK CK R++ +L ++ C
Sbjct: 226 TCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG--CQ 283
Query: 397 PNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
P+ I+ N +L+SL + +L M R GC S T+N+++ K +
Sbjct: 284 PDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNV 343
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
E M K G P+ RS+ +I G + ++ A+ Y M +G P+ T N +
Sbjct: 344 LEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVT---YNILLTA 400
Query: 514 LKERGEQGKKVIKLTSLGLKG 534
L + G+ V+ L+ L KG
Sbjct: 401 LCKDGKVDDAVVILSQLSSKG 421
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 169/395 (42%), Gaps = 58/395 (14%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + ++A+L L + + +QV PD+V T +L++ V +
Sbjct: 178 SPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVV---TCTVLIDATCKESGVGQ 234
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
A+ +F+ + G D+ + L+ C+ ++ A F + + +G D+ + N+IL
Sbjct: 235 AMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPS-YGCQPDVISHNMIL 293
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C G +A + +++ C P VT+ +N L +KG LG AL + + M + G
Sbjct: 294 RSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHT 353
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+ + N +I C K I A+E L M +RGC P++ TYN L+ LCK +++
Sbjct: 354 PNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVI 413
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
L ++ K C P+ I++N ++ L K E +LE M G K T ++
Sbjct: 414 LSQLSSKG--CSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVG-- 469
Query: 442 VNWDCEDKVRHTWE--------------------------------------EMEKKGMG 463
E KVR + +M KG
Sbjct: 470 -GLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCK 528
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
P + +YT +I G+ +G EDA +E+ +G+V
Sbjct: 529 PTEATYTTLIKGITYEGLAEDASKLSNELYSRGLV 563
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 153/350 (43%), Gaps = 30/350 (8%)
Query: 100 TCSVSTKGEIEKALNQ-----C--ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDY 152
TC S G+ K N+ C ++ + LI R D A F K + G
Sbjct: 226 TCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLD--EAIRFLKKLPSYG-C 282
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
P N IL L R+++ +++ M P +V T+ IL+N ++ +
Sbjct: 283 QPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVV---TFNILINFLCQKGLLGK 339
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILN 265
A+ V + + G + +F L+ C K ++ A + E + Y DI T NI+L
Sbjct: 340 ALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLT 399
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G V +A + C P ++Y T ++ L K GK A+ L + M KG KP
Sbjct: 400 ALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKP 459
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D++TC ++ L + ++ EA++ +K PN YNS+I LCK ++ ++L
Sbjct: 460 DLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFL 519
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYN 435
+M K C P E T+ L+K + E + + K+S + Y+
Sbjct: 520 ADMVAKG--CKPTEATYTTLIKGI--------TYEGLAEDASKLSNELYS 559
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 17/242 (7%)
Query: 271 GNVYEAKRFWKDIIKS-KCEPDSVTYAT--------FVNALTKKGKLGTALRLFQAMWEK 321
GN+ ++RF K + + PD V + + L + G+L R + M K
Sbjct: 49 GNLQHSERFSKGALNGVESSPDRVNTSLNFEESEIRHLRRLIRNGELEEGSRFLEYMTNK 108
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G+ PDV+ C +I C R A +++ ++ G + +VT+YN LI CK +E
Sbjct: 109 GKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA 168
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
LD M PN T++ +L SL K ++ VL R ++ C T V++
Sbjct: 169 LRVLDRMGVS-----PNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLI 223
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ + EM KG PD +Y V+I G GRL++A+ + ++ G
Sbjct: 224 DATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQ 283
Query: 499 PE 500
P+
Sbjct: 284 PD 285
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 9/242 (3%)
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G + E RF + + PD + + K G+ A ++ + E G DV +
Sbjct: 93 GELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSY 152
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +I C I EAL VL M G PN TY++++ LC +++ + L Q
Sbjct: 153 NVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQ 209
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCE 447
C P+ +T L+ + K V ++ M GCK TYNV++K +
Sbjct: 210 SK--CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GIL 506
D+ +++ G PD S+ +++ L GR DA+ M KG +P T IL
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNIL 327
Query: 507 VN 508
+N
Sbjct: 328 IN 329
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 19/230 (8%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDV------LGRARRFVELIQVFDEMPDLVNEKTYG 192
A + + + G ++P S FN ++ + RA ++E++ PD+V TY
Sbjct: 340 ALNVLEMMPKHG-HTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIV---TYN 395
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
ILL V++A+ + + G L ++ ++ L + E+A E E
Sbjct: 396 ILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLE----E 451
Query: 253 FGY-----DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
Y D+ T ++ G G V EA +F+ + + P++ Y + + L K +
Sbjct: 452 MCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQ 511
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
A+ M KG KP T +I + ++ +A ++ E+ +RG
Sbjct: 512 TSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRG 561
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 136/286 (47%), Gaps = 40/286 (13%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D T N ++ G CV G + EA + I +PD VTY T +N L K G A+RL
Sbjct: 219 DNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLL 278
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
++M +K +P+V+ N IID+LC +++ EA + EM +G P++ TYNSLI LC +
Sbjct: 279 RSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNL 338
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK--------------------PEEV 415
+ V L+EM N +PN + F+ ++ +L K P+ V
Sbjct: 339 CEWKHVTTLLNEM--VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVV 396
Query: 416 PW------------------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
+ V + M GC + +YN+++ Y DK E+M
Sbjct: 397 TYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM 456
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+G+ D +Y +IHGL GRL+ A++ FHEM G +P+ T
Sbjct: 457 SLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 502
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 171/386 (44%), Gaps = 46/386 (11%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + FN ++ L + E + +FD+ PD+V TYG L+N A
Sbjct: 218 PDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVV---TYGTLMNGLCKVGNTSAA 274
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNG 266
I + + ++ A+ ++ LC+ + V E F E DI T N +++
Sbjct: 275 IRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHA 334
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C L +++ SK P+ V ++T V+AL K+G + A + M ++G +PD
Sbjct: 335 LCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPD 394
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT ++D C + + EA++V M ++GC+PNV +YN LI C+I+RM+ L+
Sbjct: 395 VVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLE 454
Query: 387 EMEQK-------------NGSC--------------------LPNEITFNYLLKSLKKPE 413
+M + +G C +P+ +T+ LL L K
Sbjct: 455 QMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNH 514
Query: 414 ---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
E +L+ +E + YN+ + + R + + KG+ PD R+Y
Sbjct: 515 HLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYN 574
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKG 496
+MIHGL +G L++A F +M G
Sbjct: 575 IMIHGLCKRGLLDEANKLFRKMDENG 600
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 149/356 (41%), Gaps = 48/356 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P VF+ ++D L + V D M PD+V TY L++ + ++EA
Sbjct: 358 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVV---TYTALMDGHCLRSEMDEA 414
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
+ VFD G + ++ ++ L+ C+ + ++ A E + D T N +++G
Sbjct: 415 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 474
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +G + A + +++ S PD VTY ++ L K L A+ L +A+ D
Sbjct: 475 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 534
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
++ N ID +C + A ++ + ++G P+V TYN +I LCK LD
Sbjct: 535 ILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCK-------RGLLD 587
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
E + + +M+ NGC YN I++ ++ +
Sbjct: 588 EANK---------------------------LFRKMDENGCSRDGCIYNTIIRGFLRSNE 620
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+EM +G D + T+++ L D G + F +RL+G+ E R
Sbjct: 621 TFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQS----FERLRLRGVGEEDR 672
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 188/377 (49%), Gaps = 18/377 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR------ARRFVELIQVFDEMPDLVNE 188
+ E A F+K + R +P F+ ++ + R A ++ ++ F MPD V
Sbjct: 279 ELEEALRFYKEM-RGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV-- 335
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
Y +++ + A ++ EA+ V D FG L D+ + LL LC+ + + AE +
Sbjct: 336 -IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELL-N 393
Query: 249 EKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
E E G D+ T +++G+C GN+ +A +F+ I + PD VTY T ++ + ++G
Sbjct: 394 EMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQG 453
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
LG A L+ M + P+ VT + +ID+ C K ++ A L EM N+G +PN+ TYN
Sbjct: 454 DLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYN 513
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERME 423
S+IK C+ + ++L +M ++ +P+ IT+N L+ K E +L+ ME
Sbjct: 514 SIIKGYCRSGNVSKGQQFLPKM--RHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIME 571
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+ TYN+I+ + + +++M +G+ PD+ +Y MI+G G +
Sbjct: 572 NENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSK 631
Query: 484 DALSYFHEMRLKGMVPE 500
+ EM KG+ P+
Sbjct: 632 KSFQLHDEMLQKGLAPD 648
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 168/339 (49%), Gaps = 15/339 (4%)
Query: 171 RFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
+F E+ V EM PD+V T+ ++++ A VE A+ + D G L
Sbjct: 174 QFGEVDTVISEMEKRCVFPDVV---THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLV 230
Query: 225 AFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
+ ++L L R + A E F + D+++ N+++ G+C G + EA RF+K++
Sbjct: 231 TYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEM 290
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+ PD V+++ + T++G++ A + M E G PD V +I C +
Sbjct: 291 RGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLM 350
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
EAL V EM GCLP+V TYN+L+ LCK +R+ E L+EM+++ P+ TF
Sbjct: 351 LEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKER--GVPPDLCTFT 408
Query: 404 YLLKSLKKPEEVPWVLERMER-NGCKMSTD--TYNVILKLYVNWDCEDKVRHTWEEMEKK 460
L+ + + L+ + + ++ D TYN ++ K W++M +
Sbjct: 409 TLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSR 468
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ P+ +Y+++I +KG++++A ++ EM KG+VP
Sbjct: 469 EIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVP 507
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 190/419 (45%), Gaps = 23/419 (5%)
Query: 101 CSVSTKGEIEKALNQCE--LTLTDDLIVNVINRYRF---DWEAAYTFFKWVSREGDYSPG 155
C GE++ +++ E D + NV+ RF D EAA + +G PG
Sbjct: 170 CKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKG-IKPG 228
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIG 209
+N++L L R R+ + +VF M PD+ +++ +L+ + A +EEA+
Sbjct: 229 LVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDV---RSFNMLIGGFCRAGELEEALR 285
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGW 267
+ + D+ +F L+ R ++ A + E EFG D +++ G+
Sbjct: 286 FYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLR-EMREFGLMPDGVIYTMVIGGF 344
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G + EA R +++ C PD VTY T +N L K+ +L A L M E+G PD+
Sbjct: 345 CRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDL 404
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T +I C I +AL+ + ++ P++ TYN+LI +C+ + E D+
Sbjct: 405 CTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDD 464
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNW 444
M + PN +T++ L+ S + +V L+ M G + TYN I+K Y
Sbjct: 465 MHSR--EIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRS 522
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K + +M + PD +Y +IHG +G++ +A + M + + P+ T
Sbjct: 523 GNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVT 581
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 5/245 (2%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T+NI+++ +C E ++ K PD VT+ V+A + G + A+ L +M
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSM 220
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
KG KP +VT N ++ L R +A EV R M G P+V ++N LI C+ +
Sbjct: 221 VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGEL 280
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYN 435
E + EM + P+ ++F+ L+ + E+ L M G Y
Sbjct: 281 EEALRFYKEMRGRR--VTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYT 338
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+++ + + +EM G PD +Y +++GL + RL DA +EM+ +
Sbjct: 339 MVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKER 398
Query: 496 GMVPE 500
G+ P+
Sbjct: 399 GVPPD 403
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 103/224 (45%), Gaps = 5/224 (2%)
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
++ ++ S E ++ T V++ K + G + M ++ PDVVT N ++DA
Sbjct: 147 YRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFR 206
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ A+ ++ M ++G P + TYNS++K L + R + E M+ P+
Sbjct: 207 AGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDA--CGVAPDV 264
Query: 400 ITFNYLLKSLKKPEEVPWVLE-RMERNGCKMSTD--TYNVILKLYVNWDCEDKVRHTWEE 456
+FN L+ + E+ L E G +++ D +++ ++ L+ D E
Sbjct: 265 RSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLRE 324
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
M + G+ PD YT++I G G + +AL EM G +P+
Sbjct: 325 MREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPD 368
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 177/389 (45%), Gaps = 12/389 (3%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ-VFDE 181
DL+V + F E A G + PG +NAILD + R R+ V + V+ E
Sbjct: 136 DLVVKSCSYLNF-IEKALNIVDLAKLNG-FMPGVLSYNAILDSIVRCRKPVIFAEKVYRE 193
Query: 182 MPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
M +N +Y IL+ + AA +E + F+ + L ++ + ++ C+ K
Sbjct: 194 MIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKR 253
Query: 239 VEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
++ A S E ++ T N+++NG C +G + E ++ + PD VTY T
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
VN K G AL L M G PDVVT +I+ +C + A+E +M RG
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEE 414
PN TY SLI + M+ Y DEM + P +T+N LL + EE
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFP--PTIVTYNALLNGHCVSGRMEE 431
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+L ME G +Y+ I+ + + D+ EM +KG+ PD +Y+ +I
Sbjct: 432 AIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQ 491
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
GL ++ RL +A F EM K ++P+ T
Sbjct: 492 GLCEQRRLNEACDLFQEMLNKSLLPDEFT 520
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 211/451 (46%), Gaps = 29/451 (6%)
Query: 97 ILKTCSVSTKGEIEKALNQCELT---------LTDDLIVNVINRYRFDWEAAYTFFKWVS 147
++K+CS IEKALN +L L+ + I++ I R R F + V
Sbjct: 138 VVKSCSYLNF--IEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCR----KPVIFAEKVY 191
Query: 148 REGDYSPGS-NVF--NAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAA 201
RE S S NVF N ++ A ++ F+EM L N TY ++ Y
Sbjct: 192 REMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKL 251
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTM 260
++EA + G +L + ++ LCR +E + E ++ F D T
Sbjct: 252 KRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTY 311
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N ++NG+C +GN ++A +++++ PD VTY + +N + K G L A+ F M
Sbjct: 312 NTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHV 371
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G +P+ VT +I+ K + EA + EM G P + TYN+L+ C RME
Sbjct: 372 RGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEE 431
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVI 437
L ME K S P+ ++++ ++ + +E+ + M G TY+ +
Sbjct: 432 AIGLLRGMEGKGLS--PDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSL 489
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
++ ++ ++EM K + PD+ +YT +I+G +G L +AL+ EM KG
Sbjct: 490 IQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGF 549
Query: 498 VPEPRT-GILVNDMNIKLKERGEQGKKVIKL 527
+P+ T +L+N +N + + R E + ++KL
Sbjct: 550 LPDTVTYNVLINGLNKQARTR-EAKRLLLKL 579
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 178/429 (41%), Gaps = 66/429 (15%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+ A+ + + EG P +N +++ L R R E V EM PD V T
Sbjct: 255 DEAFKLLRSMGLEG-LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGV---T 310
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-E 249
Y L+N Y +A+ + G D+ + +L+ +C+ ++ A FF+
Sbjct: 311 YNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMH 370
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ T ++NG+ G + EA R W ++I+S P VTY +N G++
Sbjct: 371 VRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRME 430
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+ L + M KG PDVV+ + II C + + A ++ EM +G P+ TY+SLI
Sbjct: 431 EAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLI 490
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNG 426
+ LC+ +R+ + EM K S LP+E T+ L+ K ++ L + M + G
Sbjct: 491 QGLCEQRRLNEACDLFQEMLNK--SLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKG 548
Query: 427 CKMSTDTYNVI-----------------LKLY--------VNWD-----CED-------- 448
T TYNV+ LKL+ + +D C D
Sbjct: 549 FLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVA 608
Query: 449 ------------KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ +E M K+ P++ Y V+IHG G + A + EM G
Sbjct: 609 LIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFG 668
Query: 497 MVPEPRTGI 505
+P T I
Sbjct: 669 FIPHTVTII 677
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 30/349 (8%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A FF + G P + ++++ + E +++DEM P +V TY
Sbjct: 362 AMEFFDQMHVRG-LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIV---TYN 417
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
LLN + + +EEAIG+ + G D+ ++ ++ CRY+ ++ A + E +
Sbjct: 418 ALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEK 477
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
D T + ++ G C + EA +++++ PD TY + +N K+G L A
Sbjct: 478 GVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEA 537
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L L M +KG PD VT N +I+ L + R EA +L ++ +PN TY++LI+
Sbjct: 538 LNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIES 597
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMST 431
I E+ + G C+ + E V E M + K +
Sbjct: 598 CSDI-------EFKSVVALIKGFCMKGLMN------------EADQVFESMIKRNQKPNE 638
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
YNVI+ + K ++EM G P + ++ LY +G
Sbjct: 639 AVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG 687
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 395 CLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV- 450
C + F+ ++KS L E+ +++ + NG +YN IL V C V
Sbjct: 128 CNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVR--CRKPVI 185
Query: 451 --RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVN 508
+ EM G+ + SY ++I G G LE L +F EM +P T V
Sbjct: 186 FAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVI 245
Query: 509 DMNIKLKERGEQGKKVIKLTSLGLKG 534
KLK E K L S+GL+G
Sbjct: 246 GAYCKLKRIDEAFK---LLRSMGLEG 268
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 178/367 (48%), Gaps = 21/367 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM-------PDLVNEKTYGILLNRYAAAHMVE 205
+P +N +++ L +AR + +V EM PDLV TY ++N + ++
Sbjct: 6 APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLV---TYSTVINGFCKQGEMD 62
Query: 206 EAIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNII 263
A + + G D+ + +++ LCR ++ A E E + D T + +
Sbjct: 63 RACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 122
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM--WEK 321
+ GWC V EA + +K+I+ S C D+V+ + + L ++ ++G A LFQ M E
Sbjct: 123 ITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRED 182
Query: 322 GR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G KPDVVT +ID C + +A+++L M+ R C+PNV TY+SL+ LCK ++
Sbjct: 183 GAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQ 242
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
+ M K C+PN +T+ L+ L K + +++ M C T +YN +
Sbjct: 243 ALDLFRRMTSKG--CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR-LKG 496
L Y ++ + ++EM K PD+ +YT ++ G + RLE+A M+ G
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 360
Query: 497 MVPEPRT 503
+ P+ T
Sbjct: 361 IDPDVVT 367
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 182/415 (43%), Gaps = 24/415 (5%)
Query: 114 NQCEL-TLTDDLIVNVINRYRFDWEAAYTFFKWVSRE-GDYSPGSNVFNAILDVL---GR 168
+ C L ++ ++ + R R EA F + RE G + P + A++D G
Sbjct: 145 SSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGN 204
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
+ ++++ V + + N TY LL+ A +++A+ +F R G + ++ +
Sbjct: 205 LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTT 264
Query: 229 LLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
L+ LC V+ A E D + N +L+G+C LG + EAK+ +K++
Sbjct: 265 LIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKS 324
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAM-WEKGRKPDVVTCNCIIDALCFKKRIPEA 346
C PD +TY V +L A L + M G PDVVT + ++ KR EA
Sbjct: 325 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 384
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
E ++EM R PN TY+SLI LCK R+ E L +++ P+ +T+ ++
Sbjct: 385 AEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK------PDVVTYTIVI 438
Query: 407 KSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
+ L + EE +LE M + S T+N ++ D+ M G+
Sbjct: 439 EGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLE 498
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG--------MVPEPRTGILVNDM 510
P +YT ++ G GR+E A F MR K +VPE L+ +
Sbjct: 499 PGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGL 553
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 184/387 (47%), Gaps = 25/387 (6%)
Query: 119 TLTDDLIV--NVINRYRFDWE---AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV 173
++ DL+ VIN + E A + V+R+G +P + +++D L R +
Sbjct: 40 SVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDG-MAPDVVTYTSVVDGLCRDGKMD 98
Query: 174 ELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
++ EM PD + T+ L+ + A V+EA+ ++ D +
Sbjct: 99 RACEMVREMKLKGVEPD---KFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSS 155
Query: 228 NLLLWLCRYKHV-EVAETFFESEKNEFGY---DIKTMNIILNGWCVLGNVYEAKRFWKDI 283
L+ LCR + + E E F E E E G D+ T +++G+C GN+ +A + +
Sbjct: 156 ALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVM 215
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
KC P+ VTY++ ++ L K G L AL LF+ M KG P+VVT +I LC ++
Sbjct: 216 EGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKV 275
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
A ++ EM C + +YN+L+ C++ R+E + EM K SCLP+ IT+
Sbjct: 276 DAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAK--SCLPDRITYT 333
Query: 404 YLLKSL---KKPEEVPWVLERME-RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
L++ + EE ++LE M+ G TY++++ Y + +EM
Sbjct: 334 CLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIA 393
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ + P+ +Y+ +I GL GR+ A+
Sbjct: 394 RNVAPNAVTYSSLIDGLCKAGRVNHAM 420
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 140/343 (40%), Gaps = 47/343 (13%)
Query: 154 PGSNV-FNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
P V +NA+LD R R E Q+F EM L + TY L+ + A +EEA
Sbjct: 291 PADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARF 350
Query: 210 VFDRRKEFGELD-DLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGW 267
+ + K +D D+ + ++ R K VE AE E + T + +++G
Sbjct: 351 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G V A K++ K PD VTY + L + AL L + M K +P V
Sbjct: 411 CKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSV 466
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T N +I ALC + EA ++L M G P + TY +L++ + RME YE +
Sbjct: 467 GTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEV 526
Query: 388 MEQK-----NGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
M +K + + L E F+ L++ L K E+
Sbjct: 527 MRRKAKKSSSAANLVPEQAFSALIRGLCKAREI--------------------------- 559
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
DK EE+ + P + ++ GL GR E+A
Sbjct: 560 -----DKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEA 597
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 167/323 (51%), Gaps = 11/323 (3%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEV 241
PDLV TYG+++N + A + ++ ++ G+L+ + + ++ LC+YKH++
Sbjct: 14 PDLV---TYGVVVNGLCKRGDTDLAFNLLNKMEQ-GKLEPGVLIYNTIIDGLCKYKHMDD 69
Query: 242 AETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A F E E ++ T + +++ C G +A R D+I+ K PD T++ ++
Sbjct: 70 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 129
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A K+GKL A +L+ M ++ P +VT + +I+ C R+ EA ++ M ++ C P
Sbjct: 130 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 189
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW--- 417
+V TYN+LIK CK KR+E E EM Q+ + N +T+N L++ L + +
Sbjct: 190 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQR--GLVGNTVTYNILIQGLFQAGDCDMAQE 247
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ + M +G + TYN +L +K +E +++ M P +Y +MI G+
Sbjct: 248 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 307
Query: 478 DKGRLEDALSYFHEMRLKGMVPE 500
G++ED F + LKG+ P+
Sbjct: 308 KAGKVEDGWDLFCNLSLKGVKPD 330
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 5/224 (2%)
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
++ C+PD VTY VN L K+G A L M + +P V+ N IID LC K
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ +AL + +EM+ +G PNV TY+SLI LC R L +M ++ + P+ TF
Sbjct: 67 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN--PDVFTF 124
Query: 403 NYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
+ L+ + K E + + M + S TY+ ++ + D D+ + +E M
Sbjct: 125 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 184
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K PD +Y +I G R+E+ + F EM +G+V T
Sbjct: 185 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 228
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 125/263 (47%), Gaps = 12/263 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + VE +++DEM P +V TY L+N + ++E
Sbjct: 118 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV---TYSSLINGFCMHDRLDE 174
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F+ D+ + L+ C+YK VE E F E + + T NI++
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G+ A+ +K+++ P+ +TY T ++ L K GKL A+ +F+ + +P
Sbjct: 235 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 294
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ T N +I+ +C ++ + ++ + +G P+V YN++I C+ E
Sbjct: 295 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 354
Query: 386 DEMEQKNGSCLPNEITFNYLLKS 408
EM K LPN +N L+++
Sbjct: 355 KEM--KEDGTLPNSGCYNTLIRA 375
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 7/229 (3%)
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ L M KG +PD+VT +++ LC + A +L +M+ P V YN++I
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
LCK K M+ EME K PN +T++ L+ L + + +L M
Sbjct: 61 LCKYKHMDDALNLFKEMETK--GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 118
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
T++ ++ +V + ++EM K+ + P +Y+ +I+G RL++A
Sbjct: 119 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 178
Query: 489 FHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK-LTSLGLKGNA 536
F M K P+ T + K K R E+G +V + ++ GL GN
Sbjct: 179 FEFMVSKHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREMSQRGLVGNT 226
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 83/223 (37%), Gaps = 39/223 (17%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++ + +R E ++VF EM + N TY IL+ A + A +
Sbjct: 189 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 248
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE----------------------- 247
F G ++ + LL LC+ +E A FE
Sbjct: 249 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 308
Query: 248 SEKNEFGYD-------------IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ K E G+D + N +++G+C G+ EA +K++ + P+S
Sbjct: 309 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 368
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
Y T + A + G + L + M G D T + + L
Sbjct: 369 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 411
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 180/381 (47%), Gaps = 28/381 (7%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP------DLVNEKT 190
E AY + ++ +G Y P + +N IL L R + E Q FD MP D+V
Sbjct: 97 ERAYKLLEEMASKG-YEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVV---A 152
Query: 191 YGILLNRYAAAHMVEEAIGVF------DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
Y LL+ V EA G+F DR+ DL + L+ CR + + A
Sbjct: 153 YNGLLDALYKEGKVAEAWGLFKTMDMADRKVA----PDLITYNTLIDGFCRVEKTDEAMK 208
Query: 245 FFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
F+ + GY D T N IL G N+ EA+ +K ++ S C P+ TY+ ++
Sbjct: 209 LFKDVIAK-GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGH 267
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
+ G + L L++ M EK PDV+ CN +ID LC K++ +A +VL EM G +P+V
Sbjct: 268 CRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDV 327
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVL 419
TYN L+ LCK ++ +E M NG C P+ ++++ +L L K +V +
Sbjct: 328 VTYNILLDGLCKTNLVDKAHELFSTMVD-NG-CAPDIVSYSVVLNGLCKTNKVHDARVLF 385
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+RM T+N+++ D+ + + M + + PD + T ++HGL
Sbjct: 386 DRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRD 445
Query: 480 GRLEDALSYFHEMRLKGMVPE 500
R ++A+ F M KG V +
Sbjct: 446 KRTDEAVRLFQYMVEKGTVAD 466
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 183/403 (45%), Gaps = 54/403 (13%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E + P ++ I+ L + + E +++ +EM PD+ TY I+++R A
Sbjct: 3 EKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVA---TYTIIVDRLCRAG 59
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTM 260
V+EA +F + E G + A+ L+ LC+ +++E A E E GY D T
Sbjct: 60 KVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLE-EMASKGYEPDNITY 118
Query: 261 NIILNGWCVLGNVYEAKRFWK-------------------------------------DI 283
N IL+G C +G V EAK+F+ D+
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
K PD +TY T ++ + K A++LF+ + KG PD VT N I+ L K +
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
EA E+ ++M + GC PN TY+ ++ C++ M E +EM +K S P+ + N
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFS--PDVLLCN 296
Query: 404 YLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
++ L KK ++ VLE M + G TYN++L + DK + M
Sbjct: 297 AVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 356
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G PD SY+V+++GL ++ DA F M + +VP+ T
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVT 399
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 173/373 (46%), Gaps = 12/373 (3%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+ A FK V +G Y P + +N+IL L R E ++F +M D N TY I
Sbjct: 204 DEAMKLFKDVIAKG-YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSI 262
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
+L+ + + + +++ E D+ ++ LC+ K V+ A E E ++
Sbjct: 263 VLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLE-EMSKI 321
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G D+ T NI+L+G C V +A + ++ + C PD V+Y+ +N L K K+ A
Sbjct: 322 GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA 381
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
LF M E+ PDVVT N ++D LC ++ EA ++L M LP+ T +L+
Sbjct: 382 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHG 441
Query: 372 LCKIKRMETVYEYLDEMEQKN--GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKM 429
LC+ KR + M +K LP+ I L + K + + + ++ +G +
Sbjct: 442 LCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDG-EF 500
Query: 430 STD--TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
S D TY ++ + D+ +++M G PD +Y +++GL +GR A
Sbjct: 501 SPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADR 560
Query: 488 YFHEMRLKGMVPE 500
M+ KG + +
Sbjct: 561 LTQAMKEKGFLSD 573
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 180/411 (43%), Gaps = 55/411 (13%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--------PDLVNEKT 190
A FF + G YSP +N +LD L + + E +F M PDL+ T
Sbjct: 134 AKQFFDSMPSRG-YSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLI---T 189
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y L++ + +EA+ +F G + D + ++LL L R +++ AE F+
Sbjct: 190 YNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV 249
Query: 251 NE-FGYDIKTMNIILNGWCVLGN------VYEA---KRFWKDII---------------- 284
+ + T +I+L+G C +GN +YE KRF D++
Sbjct: 250 DSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVD 309
Query: 285 ----------KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
K PD VTY ++ L K + A LF M + G PD+V+ + ++
Sbjct: 310 DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 369
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ LC ++ +A + M R +P+V T+N L+ LCK +++ + LD M + N
Sbjct: 370 NGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHN-- 427
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
LP+ +T L+ L K+ +E + + M G +N++L +
Sbjct: 428 VLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQAL 487
Query: 452 HTWEEMEKKG--MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++ M K PD +YT +++ L + GR++ A+ YF +M G P+
Sbjct: 488 LFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPD 538
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 142/314 (45%), Gaps = 4/314 (1%)
Query: 222 DLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D+ + ++ LC+ V E E E + D+ T II++ C G V EA +
Sbjct: 9 DVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELF 68
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+I+ C ++V Y +N L K + A +L + M KG +PD +T N I+ LC
Sbjct: 69 HKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRM 128
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
++ EA + M +RG P+V YN L+ L K ++ + M+ + P+ I
Sbjct: 129 GKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLI 188
Query: 401 TFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T+N L+ ++K +E + + + G T TYN IL D+ +++M
Sbjct: 189 TYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKM 248
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517
G P+ +Y++++ G G + L + EM K P+ V DM K K+
Sbjct: 249 VDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKV 308
Query: 518 GEQGKKVIKLTSLG 531
+ K + +++ +G
Sbjct: 309 DDAHKVLEEMSKIG 322
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 5/180 (2%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M EKG +PDVVT + II LC ++ EALE++ EM +G P+V TY ++ LC+ +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTY 434
++ E +M ++ C N + +N L+ L K E + +LE M G + TY
Sbjct: 61 VDEADELFHKMIER--GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITY 118
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N IL + + ++ M +G PD +Y ++ LY +G++ +A F M +
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
M +KG PD +Y+ +I GL G++ +AL EM KG+ P+ T ++ D
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVD 53
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 179/358 (50%), Gaps = 11/358 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P + +++ L +F+E + DEM V+ + +L++ M+ EA +
Sbjct: 218 PNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREM 277
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWC 268
FD G ++ L+ C +V++A F++ E+G+ D+ T N+ ++G+C
Sbjct: 278 FDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDA-IGEWGFKRDVWTYNVFIHGYC 336
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+G V +A R + ++ + P+ VTY + ++ L K G++ A + + M G PD+V
Sbjct: 337 KVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIV 396
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
TC ++D LC KR+ +A+ + ++ G P+V +Y LI C +RM L +M
Sbjct: 397 TCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDM 456
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEV--PW-VLERMERNGCKMSTDTYNVILKLYVNWD 445
KN +P+ +T++ L+ L + + W +L M G T TY+++L
Sbjct: 457 HLKN--LVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQ 514
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ + +M K+G+ PD YT+MI G R+++A++ F EM +K +VP+ T
Sbjct: 515 HLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVT 572
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 172/385 (44%), Gaps = 28/385 (7%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
+++ F + + G Y + N +L L ++ ++ DE+ + +NE +YGIL+
Sbjct: 91 SFSIFGKILKRG-YGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILI 149
Query: 196 NRYAAAHMVEEAIGVFD--RRKEFGELDDLSAFQNLLLW------LCRYKHVEVAETFFE 247
N V EA+ + +++ E D N++++ LCR V+ F+
Sbjct: 150 NGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYN 209
Query: 248 SE------KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
NEF Y ++ G C +G E ++I+ + + ++
Sbjct: 210 EMMGNGVCPNEFTY-----GSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDG 264
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K G L A +F M +G +P++VTC ++ C K + A E+ + G +
Sbjct: 265 LCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRD 324
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PW-V 418
V TYN I CK+ R+ DEM ++ +PN +T+N L+ L K EV W +
Sbjct: 325 VWTYNVFIHGYCKVGRVRDAVRVFDEMCRE--GVVPNIVTYNSLIDCLCKAGEVSGAWEI 382
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
++ M R+G T ++L D+ + ++ + G+ PD SYT++IHG
Sbjct: 383 VKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCT 442
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRT 503
R+ +A++ +M LK +VP T
Sbjct: 443 SRRMGEAMNLLRDMHLKNLVPHIVT 467
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 11/237 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F + REG P +N+++D L +A ++ M PD+V T
Sbjct: 344 AVRVFDEMCREG-VVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIV---TCC 399
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKN 251
ILL+ + +++AI +F++ E G D+ ++ L+ C + + E +
Sbjct: 400 ILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLK 459
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
I T + +++G C G + A R ++ PD++TY+ ++AL KK L A
Sbjct: 460 NLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEA 519
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
+ LF M ++G +PDV+ +ID C +RI EA+ + REM + +P++ TY L
Sbjct: 520 VFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTIL 576
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 113/280 (40%), Gaps = 48/280 (17%)
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
LG+V + + I+K D+V T + L G + AL + G + V+
Sbjct: 85 LGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVS 144
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCL--------PNVTTYNSLIKHLCKIKRMETV 381
+I+ LC R+ EA+ +LR ++ NV Y+ +I LC+ ++
Sbjct: 145 YGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEG 204
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
+E+ +EM NG C PNE T+ L++ L K E +++ M R G +S + V++
Sbjct: 205 FEFYNEM-MGNGVC-PNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLI 262
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGP---------------------------------- 464
+ R ++EM +G P
Sbjct: 263 DGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFK 322
Query: 465 -DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D +Y V IHG GR+ DA+ F EM +G+VP T
Sbjct: 323 RDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVT 362
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 15/224 (6%)
Query: 94 VQNILKTCSVSTKGEIEKALNQCELT---LTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
+ + K VS EI K +++ LT +T ++++ + + + +A F + V E
Sbjct: 367 IDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLV--ES 424
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
+P + ++ +RR E + + +M P +V TY L++ + +
Sbjct: 425 GLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIV---TYSCLIDGLCRSGRI 481
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
A + + G L D + LL L + +H++ A F + K D+ I+
Sbjct: 482 SNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIM 541
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
++G+C + EA ++++ PD VTY NA+ K G
Sbjct: 542 IDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGS 585
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 179/358 (50%), Gaps = 10/358 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + FN ++ L RA + I + +EM D L +EKT+ ++ + ++ A+ V
Sbjct: 193 PDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRV 252
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDIKTMNIILNGWC 268
++ E G + L+ C+ +E A F E S + F D T N+++NG
Sbjct: 253 KEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLS 312
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G+V A +++ +PD TY + ++ L K G++ A+++ M E+ P+ V
Sbjct: 313 KTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTV 372
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N II LC + ++ EA ++ + +G LP+V TYNSLI+ LC + E EM
Sbjct: 373 TYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEM 432
Query: 389 EQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ K C P+E T+N L+ SL K +E +L+ ME +GC + TYN ++ +
Sbjct: 433 KTKG--CHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNK 490
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +++ME +G+ + +Y +I GL R+E+A +M ++G+ P+ T
Sbjct: 491 RIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFT 548
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 170/377 (45%), Gaps = 15/377 (3%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A F + +S + P FN +++ L + ++V D M PD+ T
Sbjct: 282 EEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIY---T 338
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF-FESE 249
Y L++ V+EA+ V ++ E + + ++ LC+ VE A
Sbjct: 339 YNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLT 398
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
D+ T N ++ G C+ N A +K++ C PD TY +++L +GKL
Sbjct: 399 GKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQ 458
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL L + M G +V+T N +ID C KRI EA E+ +M+ +G N TYN+LI
Sbjct: 459 EALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLI 518
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNG 426
LCK +R+E + +D+M + P++ T+N LL K ++ +++ M +G
Sbjct: 519 DGLCKSERVEEASQLMDQMIMEG--LRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDG 576
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
C+ TY ++ + ++ KG+ +Y +I L+ + R ++A+
Sbjct: 577 CEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAV 636
Query: 487 SYFHEMRLKGMVPEPRT 503
F EM K P+ T
Sbjct: 637 RLFREMIEKAEAPDAVT 653
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 164/394 (41%), Gaps = 77/394 (19%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
REG + P +N+++ L + E ++V ++M + N TY +++ + V
Sbjct: 329 REG-FDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQV 387
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNII 263
EEA + G L D+ + +L+ LC ++ VA ++ K + + D T N++
Sbjct: 388 EEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNML 447
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ C G + EA K++ S C + +TY T ++ K ++ A +F M +G
Sbjct: 448 IDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGV 507
Query: 324 KPDVVTCNCIIDALCFKKRIPEA-----------------------------------LE 348
+ VT N +ID LC +R+ EA +
Sbjct: 508 SRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAAD 567
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+++ M + GC P++ TY +LI LCK R+E + L ++ K
Sbjct: 568 IVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMK----------------- 610
Query: 409 LKKPEEVPWVLERMERNGCKMSTDTYN-VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
G ++ YN VI L+ ++ VR + EM +K PD
Sbjct: 611 -----------------GINLTPHAYNPVIQALFRRKRSKEAVR-LFREMIEKAEAPDAV 652
Query: 468 SYTVMIHGL-YDKGRLEDALSYFHEMRLKGMVPE 500
+Y ++ GL G + +A+ + EM +G VPE
Sbjct: 653 TYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPE 686
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 156/377 (41%), Gaps = 50/377 (13%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTY 191
D A F W S++ ++ P S++F +L LG+A F + + EM +++ +
Sbjct: 68 DSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSL 127
Query: 192 GILLNRYAAAHMVEEAIGVFDRRK-EFGELDDLSAFQNLLLWLC----RYKHVEVAETFF 246
+ + YA+ + E + D + EFG + + + F N LL + + K VE+A +
Sbjct: 128 LVFIESYASFGLYNEILQFVDAMEVEFGVVAN-THFYNFLLNVLVDGNKLKLVEIAHS-- 184
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+++ PD T+ + AL +
Sbjct: 185 -----------------------------------NMVSRGIRPDVSTFNILIKALCRAH 209
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
++ A+ L + M + G PD T I+ + + A+ V +M GC+ T N
Sbjct: 210 QIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVN 269
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME--- 423
L+ CK R+E +++EM + G P++ TFN L+ L K V LE M+
Sbjct: 270 VLVNGFCKEGRIEEALRFIEEMSLREG-FFPDKYTFNMLVNGLSKTGHVKHALEVMDMML 328
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
R G TYN ++ D+ +M ++ P+ +Y +I L + ++E
Sbjct: 329 REGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVE 388
Query: 484 DALSYFHEMRLKGMVPE 500
+A + KG++P+
Sbjct: 389 EATKLALVLTGKGILPD 405
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 182/406 (44%), Gaps = 51/406 (12%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F+ + G +P + + +++ L A F + ++F +M P V TY
Sbjct: 29 ARNLFQKLLHSG-VTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPV---TYN 84
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKN 251
++++ M+EEA + + E G + D+ + ++ LC+ VE A F E E+
Sbjct: 85 VMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERL 144
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ ++ N I+ G C + +A + + ++ PDS +Y ++ L K GKL A
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEA 204
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC------------- 358
+LFQ M + G P VT N +I +C + EALE+ + M+++GC
Sbjct: 205 YKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDA 264
Query: 359 ----------------------LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
+P+V TY++LI LC I R++ L++M ++ C
Sbjct: 265 HCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ--CK 322
Query: 397 PNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
P +T N L+ L K +E VL+ M +G TYN ++ + ++ R
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 382
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+M +G+ P+ +YT ++ GL RL +A F +M+ G P
Sbjct: 383 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 168/364 (46%), Gaps = 10/364 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEK-TYGI 193
E A F + R G +P N I+ L + + + QVF EM D+ + +YGI
Sbjct: 132 EEALLLFNEMERLG-CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGI 190
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L++ A A + EA +F R + G + ++ +C ++ A F+S +++
Sbjct: 191 LIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250
Query: 254 GYDIK-TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ T NI+++ C G + EA R K + PD VTY+T ++ L ++ A
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L + M ++ KP VVT N +I LC RI EA EVL M + G P+V TYN+L+
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGH 370
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKM 429
C+ + E E L +M + + PN +T+ L+ L K +P V +M+ +GC
Sbjct: 371 CRAGQTERARELLSDMVARGLA--PNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ TY ++ + + D + EM G+ PD Y + L GR AL
Sbjct: 429 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488
Query: 490 HEMR 493
E R
Sbjct: 489 REGR 492
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 174/410 (42%), Gaps = 51/410 (12%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
++ A F ++R G P +N ++D + E + +M PD+V
Sbjct: 61 FDDARELFADMNRRG-CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV--- 116
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
TY +++ + VEEA+ +F+ + G + + ++L LC+ ++ A + F E
Sbjct: 117 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 249 EKNEFGYD-----------------------------------IKTMNIILNGWCVLGNV 273
E + D T N++++G C+ +
Sbjct: 177 EAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTL 236
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA +K + C P T+ ++A K+GKL A RL + M + G PDVVT + +
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 296
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I LC R+ +A +L +M R C P V T N+LI LCK R++ E LD M
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 356
Query: 394 SCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
S P+ +T+N L+ + E +L M G + TY ++ + +
Sbjct: 357 S--PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ +M+ G P+ +YT +I G G+++ L F EM G+ P+
Sbjct: 415 CGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 122/241 (50%), Gaps = 5/241 (2%)
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++G C+ + +A+ + D+ + C P VTY ++A K+G L A L + M E G
Sbjct: 51 LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 110
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDVVT N ++D LC R+ EAL + EM+ GC PN ++N++I LC+ +++
Sbjct: 111 HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 170
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
+ EME K+ P+ ++ L+ L K E + +RM +G S TYNV++
Sbjct: 171 QVFHEMEAKD--IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIH 228
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ ++ M KG P + ++ ++I +G+L++A M G VP
Sbjct: 229 GMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVP 288
Query: 500 E 500
+
Sbjct: 289 D 289
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 5/217 (2%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PDS +Y ++ L K GKL A LFQ + G P V +I LC +A E+
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+M RGC P+ TYN +I CK +E + + +M + +P+ +T+N ++ L
Sbjct: 68 FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGH--VPDVVTYNTVMDGL 125
Query: 410 KKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K EE + MER GC + ++N I+ D+ + EME K + PD
Sbjct: 126 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDS 185
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
SY ++I GL G+L +A F M G+ P T
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVT 222
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 131/274 (47%), Gaps = 5/274 (1%)
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
I+++G G + +A+ ++ ++ S P +V Y + ++ L A LF M
Sbjct: 14 GILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 73
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G P VT N +IDA C + + EA +++++M G +P+V TYN+++ LCK R+E
Sbjct: 74 RGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEE 133
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
+EME+ C PN + N ++ L K ++ V ME + +Y ++
Sbjct: 134 ALLLFNEMERLG--CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGIL 191
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ ++ ++ M G+ P +Y V+IHG+ L++AL F MR KG
Sbjct: 192 IDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 498 VPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLG 531
P T ++ D + K + E + + ++T G
Sbjct: 252 RPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDG 285
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 108/300 (36%), Gaps = 48/300 (16%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV 186
R + A+ K ++ +G + P ++ ++ L R + + ++M P +V
Sbjct: 268 RGKLDEAFRLLKRMTDDG-HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 326
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
+ T L++ A ++EA V D G+ D+ + L+ CR E A E
Sbjct: 327 TQNT---LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 383
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ ++ T +++G C + EA + + S C P+ TY +
Sbjct: 384 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 443
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE------------- 352
G++ L+LF M G PD V + LC R ALE+LRE
Sbjct: 444 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDE 503
Query: 353 ------------------------MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
M G LP SL+ LCK + L+E+
Sbjct: 504 VYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 192/409 (46%), Gaps = 48/409 (11%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
++A + + +++ G P S V+ ++ L + + E +++ +EM PD+ +T
Sbjct: 235 DSACSLLRDMTKHG-CVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDV---QT 290
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK------------- 237
+ +++ + + +A + DR G D + LL LCR
Sbjct: 291 FNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP 350
Query: 238 ------------------HVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAK 277
++ A++F FG+ DI T NI+++G C G++ A+
Sbjct: 351 CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFAR 410
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
++ + CEP+ +TYA VN L K G L A + M +G + V NC+I AL
Sbjct: 411 DLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICAL 470
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C K+++ AL +L EM +GC P++ TYNSLI LCK+ R++ + M +
Sbjct: 471 CRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA--VA 528
Query: 398 NEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N +T+N L+ +L + ++ ++ M GC + TYN ++K + +K +
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
E+M G+G D S +MI+GL G++++A + + +G VP+ T
Sbjct: 589 EQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVT 637
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 168/369 (45%), Gaps = 7/369 (1%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKT 190
D F+ V + Y +V+ ++ LG +F + ++ +M + + E
Sbjct: 90 LDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESI 149
Query: 191 YGILLNRYAAAHMVEEAIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
+ I++ Y A +AI + D R + ++ +L L +VA F++
Sbjct: 150 FMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDM 209
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ T I++ C+ V A +D+ K C P+S+ Y T ++AL++K ++
Sbjct: 210 LSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQV 269
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL+L + M+ G PDV T N +I LC +I +A +++ M RG P+ TY L
Sbjct: 270 SEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFL 329
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
+ LC+I ++ + L ++ N + L N + Y++ K E ++ E M G +
Sbjct: 330 LHGLCRIGKLNEARKILIKIPCPNNAIL-NTLINGYVMSGQLK-EAQSFLNETMINFGFQ 387
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TYN+++ R EM ++G P+ +Y ++++GL G LE+A
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447
Query: 489 FHEMRLKGM 497
HEM +G+
Sbjct: 448 LHEMSARGL 456
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 50/267 (18%)
Query: 184 DLVNEK----------TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
DLVNE TY IL+N A ++EEA V G + + L+ L
Sbjct: 411 DLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICAL 470
Query: 234 CRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
CR + V VA SE G D+ T N ++ G C + + EA R + +++ +
Sbjct: 471 CRKEKVHVALNLL-SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVAN 529
Query: 292 SVTYATFVNALTKKG--------------------------------KLGT---ALRLFQ 316
+VTY T ++AL ++G K+G L L++
Sbjct: 530 NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE 589
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M G D ++CN +I+ LC ++ A E LR+ NRG +P++ TYNS++ LCK+
Sbjct: 590 QMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFN 403
R++ D ++ + P+ T+N
Sbjct: 650 RIKEALNLFDRLQVEGVR--PDAFTYN 674
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 4/239 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N+++ L + R E ++F M + N TY L++ ++A+ +
Sbjct: 493 PDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTL 552
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCV 269
+ G D + L+ C+ ++E +E + G D + NI++NG C
Sbjct: 553 VNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+G V A F +D I PD VTY + +N L K G++ AL LF + +G +PD T
Sbjct: 613 VGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFT 672
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
N I C + + +A G +P+ T+N L+ L K E + LDE+
Sbjct: 673 YNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 37/226 (16%)
Query: 304 KKGKLGTALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K G+ G A+RL M +P + + +++ L A V +M ++G P V
Sbjct: 159 KAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTV 218
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERM 422
T+ ++K LC +++ L +M + C+PN I + L+ +L + +V L+ +
Sbjct: 219 FTFGIVMKALCMFNEVDSACSLLRDMTKH--GCVPNSIVYQTLIHALSQKNQVSEALKLL 276
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
E EM G PD +++ +IHGL ++
Sbjct: 277 E--------------------------------EMFVMGCMPDVQTFNDVIHGLCKVNKI 304
Query: 483 EDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVIKL 527
DA M L+G P+ T G L++ + ++ + E K +IK+
Sbjct: 305 HDATKLVDRMLLRGFYPDNMTYGFLLHGL-CRIGKLNEARKILIKI 349
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 69/162 (42%), Gaps = 7/162 (4%)
Query: 343 IPEALEVL-REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+P LE+ R +G Y I L I + + + + L M+ K + E
Sbjct: 92 VPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLL--MQMKEEGIVFRESI 149
Query: 402 FNYLLKSLKKP----EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
F ++K K + + +L+ C+ + +Y+++L++ V +C + + +M
Sbjct: 150 FMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDM 209
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
KG+ P ++ +++ L ++ A S +M G VP
Sbjct: 210 LSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVP 251
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 192/409 (46%), Gaps = 48/409 (11%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
++A + + +++ G P S V+ ++ L + + E +++ +EM PD+ +T
Sbjct: 235 DSACSLLRDMTKHG-CVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDV---QT 290
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK------------- 237
+ +++ + + +A + DR G D + LL LCR
Sbjct: 291 FNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP 350
Query: 238 ------------------HVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAK 277
++ A++F FG+ DI T NI+++G C G++ A+
Sbjct: 351 CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFAR 410
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
++ + CEP+ +TYA VN L K G L A + M +G + V NC+I AL
Sbjct: 411 DLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICAL 470
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C K+++ AL +L EM +GC P++ TYNSLI LCK+ R++ + M +
Sbjct: 471 CRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA--VA 528
Query: 398 NEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N +T+N L+ +L + ++ ++ M GC + TYN ++K + +K +
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
E+M G+G D S +MI+GL G++++A + + +G VP+ T
Sbjct: 589 EQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVT 637
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 168/369 (45%), Gaps = 7/369 (1%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKT 190
D F+ V + Y +V+ ++ LG +F + ++ +M + + E
Sbjct: 90 LDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESI 149
Query: 191 YGILLNRYAAAHMVEEAIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
+ I++ Y A +AI + D R + ++ +L L +VA F++
Sbjct: 150 FMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDM 209
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ T I++ C+ V A +D+ K C P+S+ Y T ++AL++K ++
Sbjct: 210 LSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQV 269
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL+L + M+ G PDV T N +I LC +I +A +++ M RG P+ TY L
Sbjct: 270 SEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFL 329
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
+ LC+I ++ + L ++ N + L N + Y++ K E ++ E M G +
Sbjct: 330 LHGLCRIGKLNEARKILIKIPCPNNAIL-NTLINGYVMSGQLK-EAQSFLNETMINFGFQ 387
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TYN+++ R EM ++G P+ +Y ++++GL G LE+A
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447
Query: 489 FHEMRLKGM 497
HEM +G+
Sbjct: 448 LHEMSARGL 456
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 50/267 (18%)
Query: 184 DLVNEK----------TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
DLVNE TY IL+N A ++EEA V G + + L+ L
Sbjct: 411 DLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICAL 470
Query: 234 CRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
CR + V VA SE G D+ T N ++ G C + + EA R + +++ +
Sbjct: 471 CRKEKVHVALNLL-SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVAN 529
Query: 292 SVTYATFVNALTKKG--------------------------------KLGT---ALRLFQ 316
+VTY T ++AL ++G K+G L L++
Sbjct: 530 NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE 589
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M G D ++CN +I+ LC ++ A E LR+ NRG +P++ TYNS++ LCK+
Sbjct: 590 QMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFN 403
R++ D ++ + P+ T+N
Sbjct: 650 RIKEALNLFDRLQVEGVR--PDAFTYN 674
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 4/239 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N+++ L + R E ++F M + N TY L++ ++A+ +
Sbjct: 493 PDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTL 552
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCV 269
+ G D + L+ C+ ++E +E + G D + NI++NG C
Sbjct: 553 VNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+G V A F +D I PD VTY + +N L K G++ AL LF + +G +PD T
Sbjct: 613 VGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFT 672
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
N I C + + +A G +P+ T+N L+ L K E + LDE+
Sbjct: 673 YNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 37/226 (16%)
Query: 304 KKGKLGTALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K G+ G A+RL M +P + + +++ L A V +M ++G P V
Sbjct: 159 KAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTV 218
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERM 422
T+ ++K LC +++ L +M + C+PN I + L+ +L + +V L+ +
Sbjct: 219 FTFGIVMKALCMFNEVDSACSLLRDMTKH--GCVPNSIVYQTLIHALSQKNQVSEALKLL 276
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
E EM G PD +++ +IHGL ++
Sbjct: 277 E--------------------------------EMFVMGCMPDVQTFNDVIHGLCKVNKI 304
Query: 483 EDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVIKL 527
DA M L+G P+ T G L++ + ++ + E K +IK+
Sbjct: 305 HDATKLVDRMLLRGFYPDNMTYGFLLHGL-CRIGKLNEARKILIKI 349
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 69/162 (42%), Gaps = 7/162 (4%)
Query: 343 IPEALEVL-REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+P LE+ R +G Y I L I + + + + L M+ K + E
Sbjct: 92 VPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLL--MQMKEEGIVFRESI 149
Query: 402 FNYLLKSLKKP----EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
F ++K K + + +L+ C+ + +Y+++L++ V +C + + +M
Sbjct: 150 FMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDM 209
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
KG+ P ++ +++ L ++ A S +M G VP
Sbjct: 210 LSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVP 251
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 193/378 (51%), Gaps = 21/378 (5%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAI 208
+ P + + +L L ++R+ ++ ++F EM + + NE T+ +L+ + MVE AI
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 303
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN--IILNG 266
V ++ E G + + ++ +C+ V+ A ++ +G + T++ +L G
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLL-NDMGSYGCNPDTISYTTVLKG 362
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +AK +++++ C P+ VT+ TF+ L +KG + A+ L + M E G
Sbjct: 363 LCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVG 422
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT N +++ C + I ALE+ R M C PN TY +L+ LC +R++ E +
Sbjct: 423 VVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVA 479
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM + G C PN +TFN L+ + EE ++E+M +GC + TYN +L +
Sbjct: 480 EMLR--GDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLD-GIT 536
Query: 444 WDC--EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
DC ED + + KG+ PD +++ +I L + R+E+A+ FH ++ GM P+
Sbjct: 537 KDCSSEDAL-ELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPK- 594
Query: 502 RTGILVNDMNIKLKERGE 519
++ N + + L +R E
Sbjct: 595 --AVVYNKILLGLCKRCE 610
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 135/278 (48%), Gaps = 7/278 (2%)
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
G D+ A+ L+ CRY H++ A S D T ++ C G V +A
Sbjct: 106 GSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP--VAPDAYTYTPLIRVLCDRGRVADAL 163
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
D+++ C+P+ VTY + A+ + A+ + M KG P++VT N II+ +
Sbjct: 164 SLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 223
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C + R+ +A E+L + + G P+ +Y +L+K LC KR + V E EM +KN C+P
Sbjct: 224 CREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN--CMP 281
Query: 398 NEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
NE+TF+ L++ + E VLE+M +GC +T N+++ D
Sbjct: 282 NEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLL 341
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+M G PD SYT ++ GL R +DA +EM
Sbjct: 342 NDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEM 379
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 171/357 (47%), Gaps = 19/357 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + + ++ VL R + + + D+M P++V TY +LL E+
Sbjct: 140 APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVV---TYTVLLEAMCRNSGFEQ 196
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILN 265
A+ V D + G ++ + ++ +CR V+ A + F D + +L
Sbjct: 197 AMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLK 256
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C + + + ++++ C P+ VT+ + + G + A+++ + M E G
Sbjct: 257 GLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCAT 316
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ CN +I+++C + R+ +A ++L +M + GC P+ +Y +++K LC+ +R + E L
Sbjct: 317 NTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELL 376
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+EM + N C PNE+TFN + L + E+ ++E+M +GC + TYN ++ +
Sbjct: 377 NEMVRNN--CPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFC 434
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D + M K P+ +YT ++ GL + RL+ A EM L+G P
Sbjct: 435 VQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEM-LRGDCP 487
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 160/392 (40%), Gaps = 53/392 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +L+ + R F + + V DEM P++V TY +++N V++A
Sbjct: 176 PNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIV---TYNVIINGMCREGRVDDA 232
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKN----EFGYDI---- 257
+ +R +G D ++ LL LC K + E F EKN E +D+
Sbjct: 233 RELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 292
Query: 258 --------------------------KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
NI++N C G V +A + D+ C PD
Sbjct: 293 FCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+++Y T + L + + A L M P+ VT N I LC K I +A+ ++
Sbjct: 353 TISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIE 412
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+M GC V TYN+L+ C +++ E M C PN IT+ LL L
Sbjct: 413 QMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM-----PCKPNTITYTTLLTGLCN 467
Query: 412 PEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
E + E M R C + T+NV++ + ++ E+M + G P+ +
Sbjct: 468 AERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLIT 527
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
Y ++ G+ EDAL H + KG+ P+
Sbjct: 528 YNTLLDGITKDCSSEDALELLHGLVSKGVSPD 559
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 10/278 (3%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYG 192
W+ A + R + P FN + +L G + + LI+ E V TY
Sbjct: 369 WDDAKELLNEMVRN-NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYN 427
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKN 251
L+N + ++ A+ +F + + + LL LC + ++ AE E +
Sbjct: 428 ALVNGFCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRG 484
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ ++ T N++++ +C G + EA + +++ C P+ +TY T ++ +TK A
Sbjct: 485 DCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDA 544
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L L + KG PDV+T + II L + RI EA+++ +++ G P YN ++
Sbjct: 545 LELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLG 604
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
LCK ++ ++ M NG C+PNE T+ L++ L
Sbjct: 605 LCKRCEIDNAIDFFAYM-VSNG-CMPNESTYIILIEGL 640
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 103/241 (42%), Gaps = 12/241 (4%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD + L ++G+ A R+ +A G DV N ++ C + A +
Sbjct: 74 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 133
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+ M P+ TY LI+ LC R+ LD+M ++ C PN +T+ LL+++
Sbjct: 134 IGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRR--GCQPNVVTYTVLLEAM 188
Query: 410 KKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
+ E+ VL+ M GC + TYNVI+ D R + G PD
Sbjct: 189 CRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDT 248
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK 526
SYT ++ GL R +D F EM K +P T DM I+ RG ++ I+
Sbjct: 249 VSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVT----FDMLIRFFCRGGMVERAIQ 304
Query: 527 L 527
+
Sbjct: 305 V 305
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 81/207 (39%), Gaps = 15/207 (7%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM- 182
L+ + N R D A GD P FN ++ + E I++ ++M
Sbjct: 461 LLTGLCNAERLDGAAELVAEML---RGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMM 517
Query: 183 -----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
P+L+ TY LL+ E+A+ + G D+ F +++ L +
Sbjct: 518 EHGCTPNLI---TYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKED 574
Query: 238 HVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
+E A F + + G K + N IL G C + A F+ ++ + C P+ TY
Sbjct: 575 RIEEAVQLFHVVQ-DIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTY 633
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKG 322
+ L +G L A L + +G
Sbjct: 634 IILIEGLAHEGLLKEAQDLLSVLCSRG 660
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 181/375 (48%), Gaps = 16/375 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY K + +E +P ++ ++ R + ++F +M P+LV TY
Sbjct: 61 AYLLLKEM-KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLV---TYN 116
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN- 251
LL+ +++EA + D +E G D ++ L+ LC+ +++A FE N
Sbjct: 117 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 176
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ D+ + ++ G C G + EA + ++ + ++ CEPD VT+ ++ L K +L A
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 236
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++ + M ++ P+V+T + +ID LC ++ +A EV + M RG PNV TYNSLI
Sbjct: 237 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 296
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCK 428
C +++ ++EM CLP+ IT+N L+ L K P + M+ C
Sbjct: 297 FCMTNGVDSALLLMEEMTAT--GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCN 354
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TY+ ++ + + D R +++M K+ + PD +++ ++ G + G ++DA
Sbjct: 355 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 414
Query: 489 FHEMRLKGMVPEPRT 503
EM P+ T
Sbjct: 415 LEEMVASDCSPDVYT 429
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 173/377 (45%), Gaps = 26/377 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A T+F + ++G P +N +++ + + + EM P++V TY
Sbjct: 26 ATTYFAKMKKKGTV-PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVV---TYS 81
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES---- 248
+++ + V+ A +F + E G + +L + LL LCR ++ A +
Sbjct: 82 TVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRER 141
Query: 249 --EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ ++F YD ++ G C G + A + ++D C PD V Y+T + L K G
Sbjct: 142 GLQPDKFSYDT-----LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTG 196
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+L A +LF+ M E +PDVVT ++D LC R+ EA +VL M++R C PNV TY+
Sbjct: 197 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 256
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERME 423
SLI LCK ++ E M + PN +T+N L+ V L E M
Sbjct: 257 SLIDGLCKTGQVRDAQEVFKRMIVRGIE--PNVVTYNSLIHGFCMTNGVDSALLLMEEMT 314
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
GC TYN ++ + + +M+ K PD +Y+ +I G R++
Sbjct: 315 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 374
Query: 484 DALSYFHEMRLKGMVPE 500
A + F +M + ++P+
Sbjct: 375 MARTLFDDMLKQAVLPD 391
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 169/362 (46%), Gaps = 15/362 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVF------DEMPDLVNEKTYGILLNRYAAA 201
RE P ++ ++ L + + ++VF D PD+V Y L+
Sbjct: 139 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV---AYSTLIAGLCKT 195
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTM 260
++EA +F++ +E D+ F L+ LC+ ++ A+ E+ E ++ T
Sbjct: 196 GRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 255
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+ +++G C G V +A+ +K +I EP+ VTY + ++ + +AL L + M
Sbjct: 256 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 315
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G PD++T N +ID LC R PEA + +MK + C P+V TY+ LI CK++R++
Sbjct: 316 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDM 375
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVI 437
D+M ++ + LP+ +TF+ L++ ++ +LE M + C TY +
Sbjct: 376 ARTLFDDMLKQ--AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 433
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + + R + M K+G P+ +YT +I G+ A EM G+
Sbjct: 434 VDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGV 493
Query: 498 VP 499
P
Sbjct: 494 QP 495
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 162/346 (46%), Gaps = 15/346 (4%)
Query: 150 GDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHM 203
GD P ++ ++ L + R E ++F++M PD+V T+ L++
Sbjct: 176 GDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVV---TFTALMDGLCKGDR 232
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNI 262
++EA V + ++ ++ + +L+ LC+ V A+ F+ ++ T N
Sbjct: 233 LQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNS 292
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++G+C+ V A +++ + C PD +TY T ++ L K G+ A RLF M K
Sbjct: 293 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 352
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDV+T +C+I C +RI A + +M + LP+V T+++L++ C ++
Sbjct: 353 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 412
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILK 439
L+EM + C P+ T+ L+ K E VL+RM + GC+ + TY ++
Sbjct: 413 RLLEEMVASD--CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALID 470
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
+ EEM G+ P+ +Y +I G G LE+A
Sbjct: 471 AFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 516
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 130/290 (44%), Gaps = 41/290 (14%)
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E EKN + T I+++G C + EA ++ + K P+ TY +N K
Sbjct: 1 MECEKN-----VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKV 55
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
K+ A L + M E G P+VVT + +I C + ++ A ++ R+M GC+PN+ TY
Sbjct: 56 HKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTY 115
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQK---------------------------------N 392
N+L+ LC+ M+ YE LDEM ++ N
Sbjct: 116 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 175
Query: 393 GSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
G C P+ + ++ L+ L K +E + E+M N C+ T+ ++ D +
Sbjct: 176 GDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 235
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ E ME + P+ +Y+ +I GL G++ DA F M ++G+ P
Sbjct: 236 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEP 285
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 154/317 (48%), Gaps = 11/317 (3%)
Query: 182 MPDLVNEKTYGILLNRYAAAHMVEEAIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
+PD++ TY L++ EA +F D + +F D ++ + L+ C+ + ++
Sbjct: 319 LPDII---TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVIT-YSCLIGGFCKLERID 374
Query: 241 VAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
+A T F+ K D+ T + ++ G+C G V +A+R ++++ S C PD TY + V
Sbjct: 375 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLV 434
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ K G++ A R+ + M ++G +P+VVT +IDA C + A ++L EM G
Sbjct: 435 DGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQ 494
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
PNV TY SLI C +E + L+ +E ++ +C + + ++ L + + L
Sbjct: 495 PNVITYRSLIGGFCGTGDLEEARKMLERLE-RDENCKADMFAYRVMMDGLCRTGRMSAAL 553
Query: 420 ERME---RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME-KKGMGPDQRSYTVMIHG 475
E +E ++G D Y +++ K EEM + P+ +Y +I
Sbjct: 554 ELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQE 613
Query: 476 LYDKGRLEDALSYFHEM 492
L +GR E+A + E+
Sbjct: 614 LAREGRHEEANALADEL 630
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 6/228 (2%)
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
A R +E + D PD+ TY L++ + + EA V R + G ++ +
Sbjct: 411 AERLLEEMVASDCSPDVY---TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTA 467
Query: 229 LLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
L+ CR VA E N ++ T ++ G+C G++ EA++ + + + +
Sbjct: 468 LIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDE 527
Query: 288 -CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
C+ D Y ++ L + G++ AL L +A+ + G P +I LC K + +A
Sbjct: 528 NCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKA 587
Query: 347 LEVLREMK-NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
+EVL EM +R PN Y ++I+ L + R E DE+ G
Sbjct: 588 MEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGNKG 635
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 183/378 (48%), Gaps = 25/378 (6%)
Query: 143 FKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYA 199
FK ++ G Y G F ++++ + F L +V +M + EK + ++ Y
Sbjct: 48 FKSGTQMGSYKLGDLSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYG 107
Query: 200 AAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCR----------YKHVEVAETFFES 248
AH+ E+A+ +F R EF + +F ++L + + Y HV VA
Sbjct: 108 KAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHV-VASKSLNI 166
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
N T N+++ C LG V +A +++I C PD+ TY+T ++ L K+ ++
Sbjct: 167 HPNAL-----TFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERI 221
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A+ L M +G P++V N +I ALC K + A +++ M +GC+PN TYN+L
Sbjct: 222 DEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNAL 281
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN 425
+ LC ++E L++M + C+PN++TF L+ + + VL +E
Sbjct: 282 VHGLCLKGKLEKAVSLLNQM--VSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEAR 339
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G + + Y+ ++ ++ W+EM KG GP+ Y+ +I GL +G+L++A
Sbjct: 340 GHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEA 399
Query: 486 LSYFHEMRLKGMVPEPRT 503
+ EM+ KG +P T
Sbjct: 400 RGFLSEMKNKGYLPNSFT 417
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 199/421 (47%), Gaps = 34/421 (8%)
Query: 115 QCELTLTD-DLIVNVINRYRFDWEAAYTFFKWV--SREGDYSPGSNVFNAILDVLGRARR 171
QC+ T+ + ++NVI + + A F+ V S+ + P + FN ++ + R
Sbjct: 127 QCKQTVKSFNSVLNVIVQEGL-FNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGL 185
Query: 172 FVELIQVFDEMP---DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
+ I+VF E+P + TY L++ ++EA+ + D + G +L AF
Sbjct: 186 VDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNV 245
Query: 229 LLLWLCRYKHVEVAETFFESE------KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
L+ LC+ + A ++ NE Y N +++G C+ G + +A
Sbjct: 246 LISALCKKGDLGRAAKLVDNMFLKGCVPNEVTY-----NALVHGLCLKGKLEKAVSLLNQ 300
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
++ +KC P+ VT+ T +N +G+ R+ ++ +G + + + +I LC + +
Sbjct: 301 MVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGK 360
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+A+E+ +EM +GC PN Y++LI LC+ +++ +L EM KN LPN T+
Sbjct: 361 FNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEM--KNKGYLPNSFTY 418
Query: 403 NYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED----KVRHTWE 455
+ L++ + V + M N C + Y+++ +N C+D + W+
Sbjct: 419 SSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSIL----INGLCKDGKFMEALMVWK 474
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT---GILVNDMNI 512
+M +G+ D +Y+ MIHG + +E L F++M +G V +P IL+N I
Sbjct: 475 QMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCI 534
Query: 513 K 513
+
Sbjct: 535 Q 535
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 137/297 (46%), Gaps = 14/297 (4%)
Query: 106 KGEIEKALNQCELTLTDDLIVN------VINRYRFDWEAAYTFFKWVSREGDYSPGSN-V 158
KG++EKA++ +++ + N +IN + A+ VS E G+ V
Sbjct: 288 KGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYV 347
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+++++ L + +F + ++++ EM N Y L++ ++EA G K
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVY 274
G L + + +L+ A + E N ++ +I++NG C G
Sbjct: 408 NKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFM 467
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR--KPDVVTCNC 332
EA WK ++ + D V Y++ ++ + L+LF M +G +PDV+T N
Sbjct: 468 EALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNI 527
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK-IKRMETVYEYLDEM 388
+++A C +K I A+++L M ++GC P+ T + +K L + + + E+LDE+
Sbjct: 528 LLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDEL 584
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 106/253 (41%), Gaps = 27/253 (10%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
P + V++A++D L R + E EM + L N TY L+ Y A +AI
Sbjct: 377 GPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAIL 436
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCR-YKHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
V+ + + + L+ LC+ K +E + + D+ + +++G+C
Sbjct: 437 VWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFC 496
Query: 269 VLGNVYEAKRFWKDII--KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
V + + + ++ +PD +TY +NA + + A+ + M ++G PD
Sbjct: 497 NANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPD 556
Query: 327 VVTCNCIIDAL---------------------CFKKRIPEALEVLREMKNRGCLPNVTTY 365
+TC+ + L ++R A +++ M ++ LP +T+
Sbjct: 557 FITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTW 616
Query: 366 NSLIKHLCKIKRM 378
+++ +CK K +
Sbjct: 617 AMVVQQVCKPKNV 629
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 206/433 (47%), Gaps = 15/433 (3%)
Query: 104 STKGEIEKALNQCE----LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVF 159
S+ E+ K+L E + ++ +L+ +++R++ DW++A F+W Y +
Sbjct: 56 SSDDEVFKSLVHDEACNAIPMSQNLVDVLLHRFKDDWKSALGLFRWAESRLGYEHAPEAY 115
Query: 160 NAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF 217
+ ++D+LG+ ++ ++ + +EM +LV T + R A A E+A+ VFD F
Sbjct: 116 DMMVDILGKLKQVDKMRALMEEMRQGNLVRLSTVAKAMRRLAGAGEWEDAVRVFDDLGNF 175
Query: 218 GELDDLSAFQNLLL-WLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEA 276
EL+ + NLLL LC+ + VE A F K + T NI ++GWC V EA
Sbjct: 176 -ELEKNTESMNLLLDTLCKERKVEQARAIFLELKPHISPNTHTFNIFIHGWCKANRVDEA 234
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
+ +++ C P ++Y+T + + ++ L M +G P+VVT I+ +
Sbjct: 235 EWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAPNVVTYTTIMCS 294
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
L ++ EAL++ M++ GC P+ YN+LI L + ++ E+E
Sbjct: 295 LTKVEQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRAGQLREAVRVF-EVEMPKTGVP 353
Query: 397 PNEITFNYLLKSL---KKPEEVPWVLERMERNG-CKMSTDTYNVILKLYVNWDCEDKVRH 452
PN T+N ++ + ++ +L +E + CK TY +LK D + +
Sbjct: 354 PNTSTYNSMIAMFCHHSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDSLSN 413
Query: 453 TWEEM-EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
++M K + D +YT++IHGL + E + F EM K + P +T L+ D
Sbjct: 414 FLDDMVNKHHLSLDVSAYTLLIHGLCRANKCEWGYNLFEEMVGKAITPRYKTCALLLD-E 472
Query: 512 IKLKERGEQGKKV 524
IK K + +++
Sbjct: 473 IKQKNMHDAAERI 485
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 169/355 (47%), Gaps = 15/355 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
FN +L + + ++F +I + ++M L N TY IL+N + + A+ + +
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G + +LL C K + A + + E GY D T +++G +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVD-QMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA +++ C+P+ VTY VN L K+G + A L M + DVV N I
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
ID+LC + + +AL + +EM+ +G PNV TY+SLI LC R + L +M +K
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWV-LERMERNGCKMSTD----TYNVILKLYVNWDCED 448
+ PN +TFN L+ + K E +V E++ + K S D TYN ++ + D D
Sbjct: 252 N--PNLVTFNALIDAFVK--EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K + +E M K PD +Y +I G R+ED F EM +G+V + T
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 174/365 (47%), Gaps = 15/365 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + E + + D M P+LV TYG+++N
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV---TYGVVVNGLCKRG 164
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
++ A + ++ + D+ F ++ LC+Y+HV+ A F E E ++ T +
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ C G +A + D+I+ K P+ VT+ ++A K+GK A +L M ++
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
PD+ T N +I+ C R+ +A ++ M ++ C P++ TYN+LIK CK KR+E
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
E EM + + + +T+ L++ L + V ++M +G TY+++L
Sbjct: 345 TELFREMSHR--GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
N +K ++ M+K + D YT MI G+ G+++D F + LKG+
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Query: 499 PEPRT 503
P T
Sbjct: 463 PNVVT 467
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 126/267 (47%), Gaps = 12/267 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E +P FNA++D + +FVE ++ D+M PD+ TY L+N +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF---TYNSLINGFCMHD 304
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMN 261
+++A +F+ DL + L+ C+ K VE E F E D T
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++ G G+ A++ +K ++ PD +TY+ ++ L GKL AL +F M +
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
K D+ +I+ +C ++ + ++ + +G PNV TYN++I LC + ++
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKS 408
Y L +M++ LP+ T+N L+++
Sbjct: 485 YALLKKMKEDGP--LPDSGTYNTLIRA 509
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 13/228 (5%)
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
++KS+ P + ++A+ K K + L + M G ++ T N +I+ C + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
I AL +L +M G P++ T +SL+ C KR+ +D+M + P+ ITF
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR--PDTITF 118
Query: 403 NYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE----DKVRHTWE 455
L+ L K E +++RM + GC+ + TY V+ VN C+ D +
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV----VNGLCKRGDIDLAFNLLN 174
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ME + D + +I L ++DAL+ F EM KG+ P T
Sbjct: 175 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 222
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+VF +M PD++ TY ILL+ +E+A+ VFD ++ D+ + ++
Sbjct: 381 KVFKQMVSDGVPPDIM---TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 231 LWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
+C+ V+ F S ++ T N +++G C + EA K + +
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAM 318
PDS TY T + A + G + L + M
Sbjct: 498 PDSGTYNTLIRAHLRDGDKAASAELIREM 526
>gi|259490380|ref|NP_001159198.1| uncharacterized protein LOC100304284 [Zea mays]
gi|223942589|gb|ACN25378.1| unknown [Zea mays]
gi|414865313|tpg|DAA43870.1| TPA: hypothetical protein ZEAMMB73_208601 [Zea mays]
Length = 519
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 185/410 (45%), Gaps = 16/410 (3%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRF---DWEAAYTFFKWVSREGDYSPGSNV 158
S +T +E AL ++L+ L+ V+ R+RF D A + + G +P
Sbjct: 52 SAATPSAMESALAASAVSLSSPLLDAVMRRFRFAHGDPLRALSLLSLAADRGGIAPSPYA 111
Query: 159 FNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAAHMVEEAIGVFD-R 213
+ L VLGRARRF + + PD + +T I+L R A V E + F
Sbjct: 112 IDTALYVLGRARRFPHMWNLVANTRRICPDALTPRTAMIVLGRVAKVCSVRETVASFRCL 171
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
+ F +D F LL LC+ K + A F + K EF + T NI+L+GW +
Sbjct: 172 ARLFHTVDPAVLFNALLRTLCQEKSMSDARNVFHALKYEFRVNRHTFNILLSGW---KSA 228
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+A+ F ++ + EPD VTY + ++ K + A +L M K PD++T +
Sbjct: 229 EDAEAFVTEMRELGVEPDLVTYNSLIDCHCKNRDVQKAYKLLDEMRHKDISPDIITYTSL 288
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I L + +A ++L+EM GC P+V YN+ I++ KR+ + +D+M K
Sbjct: 289 IGGLGLIGQPDKAKDLLKEMYELGCYPDVPAYNAAIRNFVIAKRLGDAFALMDQMVSKG- 347
Query: 394 SCLPNEITFNYLLKSLKKPEEV--PWVL-ERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
+PN T+N + ++ W L ERM GC +T + I++L +
Sbjct: 348 -LMPNPTTYNLFFRCYYWAFDIGSAWRLYERMRSEGCYPNTQSCMFIIRLCHRYGKVALA 406
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
W +M G V++ L D+G+LEDA F +M G P
Sbjct: 407 LELWSDMVSSSFGSLTLVSDVLLDLLCDEGKLEDAERCFCQMVELGQKPS 456
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 34/163 (20%)
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
K +A + EM+ G P++ TYNSLI CK + ++ Y+ LDEM K+ S P+ I
Sbjct: 226 KSAEDAEAFVTEMRELGVEPDLVTYNSLIDCHCKNRDVQKAYKLLDEMRHKDIS--PDII 283
Query: 401 TFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
T+ L+ L + DK + +EM +
Sbjct: 284 TYTSLIGGLGLIGQ--------------------------------PDKAKDLLKEMYEL 311
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G PD +Y I RL DA + +M KG++P P T
Sbjct: 312 GCYPDVPAYNAAIRNFVIAKRLGDAFALMDQMVSKGLMPNPTT 354
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 95/241 (39%), Gaps = 21/241 (8%)
Query: 308 LGTALRLFQAMW---EKGRK--PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
LG A R F MW R+ PD +T A+ R+ + V + + CL +
Sbjct: 119 LGRARR-FPHMWNLVANTRRICPDALTPR---TAMIVLGRVAKVCSVRETVASFRCLARL 174
Query: 363 -------TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
+N+L++ LC+ K M ++ + N TFN LL K E+
Sbjct: 175 FHTVDPAVLFNALLRTLCQEKSMSDARNVFHALKYEFRV---NRHTFNILLSGWKSAEDA 231
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
+ M G + TYN ++ + K +EM K + PD +YT +I G
Sbjct: 232 EAFVTEMRELGVEPDLVTYNSLIDCHCKNRDVQKAYKLLDEMRHKDISPDIITYTSLIGG 291
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPE-PRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKG 534
L G+ + A EM G P+ P + + I K G+ + ++ S GL
Sbjct: 292 LGLIGQPDKAKDLLKEMYELGCYPDVPAYNAAIRNFVIA-KRLGDAFALMDQMVSKGLMP 350
Query: 535 N 535
N
Sbjct: 351 N 351
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 148/286 (51%), Gaps = 6/286 (2%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG-YDIKTMNIILNGWCVLGNVYEAKRFW 280
LS F + C+ V A + +N+ D+ T N+++NG C G + EA +F
Sbjct: 81 SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
++ C+P+ +T+ + ++ G+ A +L M KG P VVT N +I+ LC +
Sbjct: 141 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 200
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
+ A+++L +M GC PN +YN L+ CK K+M+ EYLD M + C P+ +
Sbjct: 201 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG--CYPDIV 258
Query: 401 TFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T+N LL +L K +V +L ++ GC TYN ++ ++ +EM
Sbjct: 259 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 318
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+KG+ PD +Y+ ++ GL +G++++A+ +FH++ G+ P T
Sbjct: 319 RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 364
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 160/337 (47%), Gaps = 9/337 (2%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+G+A + ++ ++ PD+V TY +L+N ++EAI + +G ++
Sbjct: 98 VGQAMKLLDEMRNKGSKPDVV---TYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 154
Query: 226 FQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+L +C AE + + T NI++N C G + A + +
Sbjct: 155 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP 214
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
C P+S++Y ++ K+ K+ A+ M +G PD+VT N ++ ALC ++
Sbjct: 215 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 274
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
A+E+L ++ ++GC P + TYN++I L K+ + E + LDEM +K P+ IT++
Sbjct: 275 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK--PDIITYSS 332
Query: 405 LLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ L K +E +E G + + TYN I+ D+ M K
Sbjct: 333 LVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR 392
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
P + +YT++I G+ +G ++AL +E+ +G+V
Sbjct: 393 CKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 429
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 26/326 (7%)
Query: 100 TCSVSTKGEIEKALNQC-------ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDY 152
TC S G+ K L++ ++ + LI + R D EA K+++ Y
Sbjct: 92 TCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD-EA----IKFLNNMPSY 146
Query: 153 SPGSNVF--NAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
NV N IL + R+++ ++ +M P +V T+ IL+N ++
Sbjct: 147 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV---TFNILINFLCRQGLL 203
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNII 263
AI + ++ G + ++ LL C+ K ++ A + + + Y DI T N +
Sbjct: 204 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 263
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L C G V A + C P +TY T ++ L+K GK A++L M KG
Sbjct: 264 LTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 323
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
KPD++T + ++ L + ++ EA++ +++ G PN TYNS++ LCK ++ + +
Sbjct: 324 KPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID 383
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL 409
+L M K C P E T+ L++ +
Sbjct: 384 FLAYMISKR--CKPTEATYTILIEGI 407
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 169/388 (43%), Gaps = 22/388 (5%)
Query: 15 HFQQKFKFHSQLTTQFSKLQSCNSVT--SHKTLIPIINLQARNSEFLFLGRIETAQLVHS 72
H QQK + F+ + S S+ + +TL P +L S F F ++T
Sbjct: 44 HLQQKTPLPIPIFIIFALIISVVSICCINQQTLFPCFSL----SGFSFY--VQTTCKESG 97
Query: 73 LANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKAL----NQCELTLTDDLIV-N 127
+ + + + R G + + N+L + +G +++A+ N ++I N
Sbjct: 98 VGQAMKLLDEMRNKGSKPDVVTYNVLIN-GICKEGRLDEAIKFLNNMPSYGCQPNVITHN 156
Query: 128 VINRYRFD---WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP- 183
+I R W A + R+G SP FN +++ L R I + ++MP
Sbjct: 157 IILRSMCSTGRWMDAEKLLSDMLRKG-CSPSVVTFNILINFLCRQGLLGRAIDILEKMPM 215
Query: 184 --DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
N +Y LL+ + ++ AI D G D+ + LL LC+ V+V
Sbjct: 216 HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 275
Query: 242 A-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A E + + T N +++G +G A + ++ + +PD +TY++ V+
Sbjct: 276 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 335
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L+++GK+ A++ F + G +P+ +T N I+ LC ++ A++ L M ++ C P
Sbjct: 336 GLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKP 395
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEM 388
TY LI+ + + + L+E+
Sbjct: 396 TEATYTILIEGIAYEGLAKEALDLLNEL 423
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 175/371 (47%), Gaps = 9/371 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
P V+NA++ A + ++ +MP + TY L+ A+ V +
Sbjct: 131 GPDVMVYNAMVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLE 190
Query: 213 RRKEFGELDDLSAFQNLLLWLC-RYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
G L D+ + LL C R + + + E DI T N++LNG C G
Sbjct: 191 DMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEG 250
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
V +A F K++ CEP++V+Y + L + A +L + M KG P+VVT N
Sbjct: 251 RVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFN 310
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I LC + + A+EVL +M GC PN +YN L+ CK K++ E+++ M +
Sbjct: 311 MLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSR 370
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCED 448
C P+ +++N LL +L + EV +E +++ GC +YN ++
Sbjct: 371 G--CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTK 428
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVN 508
+ +EM KG+ PD +Y+ + GL + R+E+A+ F +++ G+ P T L N
Sbjct: 429 EALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRP---TAALYN 485
Query: 509 DMNIKLKERGE 519
+ + L +R E
Sbjct: 486 AILLGLCKRRE 496
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 173/359 (48%), Gaps = 23/359 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +L+ + + + +++ DEM PD+V TY ++LN VE+A
Sbjct: 199 PDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIV---TYNVVLNGICQEGRVEDA 255
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
+ +G + ++ +L L + E AE E ++ ++ T N++++
Sbjct: 256 MEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISF 315
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G V A + + + C P+S++Y ++A K+ K+ A+ + M +G PD
Sbjct: 316 LCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPD 375
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+V+ N ++ ALC + A+E+L ++K++GC P + +YN++I L K + + E LD
Sbjct: 376 IVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLD 435
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM K P+ IT++ + L + EE +++ G + + YN IL
Sbjct: 436 EMTSKGLQ--PDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILL---- 489
Query: 444 WDCEDKVRHT----WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
C+ + H + M G P++ +YT+++ GL +G +++A F ++ +G+V
Sbjct: 490 GLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE-LIQVFDEMPD---LVNEKTY 191
WE A + ++ +G P FN ++ L R R VE ++V ++MP N +Y
Sbjct: 287 WEDAEKLMEEMAHKG-CPPNVVTFNMLISFLCR-RGLVEPAMEVLEQMPQYGCTPNSLSY 344
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
LL+ + + +A+ + G D+ ++ LL LCR V+VA K+
Sbjct: 345 NPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKD 404
Query: 252 EFGYDIK-TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ + + N +++G G EA ++ +PD +TY+T + L ++ ++
Sbjct: 405 KGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEE 464
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A+R F + + G +P N I+ LC ++ A+++ M + GC+PN +TY L++
Sbjct: 465 AVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVE 524
Query: 371 HL 372
L
Sbjct: 525 GL 526
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 5/188 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILL 195
A F + + G Y P +N +L L R I++ ++ D +Y ++
Sbjct: 360 AMEFVELMVSRGCY-PDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVI 418
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFG 254
+ A +EA+ + D G D+ + + LCR +E A TF + +
Sbjct: 419 DGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIR 478
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
N IL G C + A + +I S C P+ TY V L +G + A L
Sbjct: 479 PTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEAREL 538
Query: 315 FQAMWEKG 322
F + +G
Sbjct: 539 FAQLCSRG 546
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 209/449 (46%), Gaps = 49/449 (10%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ-VFDE 181
DL+V +R + A + G + PG +NA+LD R++R + + VF E
Sbjct: 138 DLVVKSYSRLSL-IDKALSIVHLAQAHG-FMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 182 MPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
M + N TY IL+ + A ++ A+ +FD+ + G L ++ + L+ C+ +
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 239 VEVA----------------------------------ETFFESEKNEFGYDIK--TMNI 262
++ +F +E N GY + T N
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ G+C GN ++A ++++ P +TY + ++++ K G + A+ M +G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P+ T ++D K + EA VLREM + G P+V TYN+LI C +ME
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILK 439
L++M++K S P+ ++++ +L + +V L M G K T TY+ +++
Sbjct: 436 AVLEDMKEKGLS--PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + +EEM + G+ PD+ +YT +I+ +G LE AL +EM KG++P
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 500 EPRT-GILVNDMNIKLKERGEQGKKVIKL 527
+ T +L+N +N + + R E + ++KL
Sbjct: 554 DVVTYSVLINGLNKQSRTR-EAKRLLLKL 581
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 164/354 (46%), Gaps = 44/354 (12%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK-HVEVAETFF-ES 248
+ +++ Y+ ++++A+ + + G + + ++ +L R K ++ AE F E
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+++ ++ T NI++ G+C GN+ A + + C P+ VTY T ++ K K+
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
+L ++M KG +P++++ N +I+ LC + R+ E VL EM RG + TYN+L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 369 IK-----------------------------------HLCKIKRMETVYEYLDEMEQKNG 393
IK +CK M E+LD+M + G
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR-G 375
Query: 394 SCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLY-VNWDCEDK 449
C PNE T+ L+ + E VL M NG S TYN ++ + V ED
Sbjct: 376 LC-PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ E+M++KG+ PD SY+ ++ G +++AL EM KG+ P+ T
Sbjct: 435 IA-VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 147/335 (43%), Gaps = 21/335 (6%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFES 248
TY L++ A + A+ D+ + G + + L+ + ++ E E
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
N F + T N ++NG CV G + +A +D+ + PD V+Y+T ++ + +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
ALR+ + M EKG KPD +T + +I C ++R EA ++ EM G P+ TY +L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERN 425
I C +E + +EM +K LP+ +T++ L+ L K E +L ++
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEK--GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVR---------------HTWEEMEKKGMGPDQRSYT 470
S TY+ +++ N + + V +E M K PD +Y
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYN 644
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
+MIHG G + A + + EM G + T I
Sbjct: 645 IMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 145/339 (42%), Gaps = 31/339 (9%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + ++D + E +V EM P +V TY L+N + +E+A
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV---TYNALINGHCVTGKMEDA 434
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
I V + KE G D+ ++ +L CR V+ A + E E G D T + ++
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV-KREMVEKGIKPDTITYSSLIQ 493
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C EA ++++++ PD TY +NA +G L AL+L M EKG P
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DVVT + +I+ L + R EA +L ++ +P+ TY++LI++ I E+
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI-------EFK 606
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ G C+ +T E V E M K YN+++ +
Sbjct: 607 SVVSLIKGFCMKGMMT------------EADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
K ++EM K G + ++ L+ +G++ +
Sbjct: 655 DIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 116/270 (42%), Gaps = 27/270 (10%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +++++ RR E +++EM PD E TY L+N Y +E+A
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD---EFTYTALINAYCMEGDLEKA 539
Query: 208 IGVFDRRKEFGELDDLSAF----------------QNLLLWLCRYKHVEVAETFFESEKN 251
+ + + E G L D+ + + LLL L + V T+ +N
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ K++ ++ G+C+ G + EA + ++ ++ +PD Y ++ + G + A
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L++ M + G VT ++ AL + ++ E V+ + L L++
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEI 719
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ M+ V + L EM K+G LPN I+
Sbjct: 720 NHREGNMDVVLDVLAEM-AKDG-FLPNGIS 747
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 172/373 (46%), Gaps = 13/373 (3%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGILLNRY 198
FK + G Y G + F ++++ F L +V D M ++ EK + ++ Y
Sbjct: 76 IFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAY 135
Query: 199 AAAHMVEEAIGVFDRRK-EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDI 257
AH+ E+A+ +FDR EF +F ++L + + A F+ G I
Sbjct: 136 GKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSI 195
Query: 258 K----TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
T N+++ C +G V +A + ++D+ KCEPD TY T ++ L K ++ A+
Sbjct: 196 SPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVS 255
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
L M G P VT N +I+ LC K + A +++ M +GC+PN TYN+LI LC
Sbjct: 256 LLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLC 315
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMS 430
++E LD M + C+PN +T+ ++ L K VL ME G ++
Sbjct: 316 LKGKLEKAISLLDRM--VSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVN 373
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
Y+ ++ + H ++EM KG + Y+ +I GL G+ +DA+
Sbjct: 374 EYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLS 433
Query: 491 EMRLKGMVPEPRT 503
EM KG P T
Sbjct: 434 EMTNKGCTPNAYT 446
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 174/426 (40%), Gaps = 92/426 (21%)
Query: 125 IVNVINRYRFDWEAAYTFFKWV--SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM 182
++NVI + + A F+ V ++ SP FN ++ + + + IQVF +M
Sbjct: 167 VLNVIIQEGL-FHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDM 225
Query: 183 ------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
PD+ TY L++ A ++EA+ + D + G F L+ LC+
Sbjct: 226 TIRKCEPDVY---TYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKK 282
Query: 237 KHVEVAETFFESE------KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
+ A ++ NE Y N +++G C+ G + +A ++ SKC P
Sbjct: 283 GDLSRAAKLVDNMFLKGCIPNEVTY-----NTLIHGLCLKGKLEKAISLLDRMVSSKCVP 337
Query: 291 DSVTYATFVNALTKKG-----------------------------------KLGTALRLF 315
+ VTY T +N L K+G K A+ LF
Sbjct: 338 NVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLF 397
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ M KG + + + + +ID LC + +A+EVL EM N+GC PN T +SL+K +
Sbjct: 398 KEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEA 457
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYN 435
E +M + N + NE+ ++ L+ L K +V
Sbjct: 458 GNSHRAVEVWKDMAKHNFT--QNEVCYSVLIHGLCKDGKV-------------------- 495
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+ W +M KG PD +Y+ MI+GL G +EDA+ ++EM +
Sbjct: 496 ------------KEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQ 543
Query: 496 GMVPEP 501
G +P
Sbjct: 544 GPDSQP 549
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 137/298 (45%), Gaps = 40/298 (13%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLN 196
+ A FK ++ +G Y + V++A++D L R + + ++V EM + G N
Sbjct: 391 QEAMHLFKEMTVKG-YELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTN------KGCTPN 443
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD 256
Y + +++ G F+ ++ +W KH +NE Y
Sbjct: 444 AYTCSSLMK---GFFEAGNSHRAVE---------VWKDMAKH--------NFTQNEVCY- 482
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+++++G C G V EA W ++ C+PD V Y++ +N L+ G + A++L+
Sbjct: 483 ----SVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYN 538
Query: 317 AMWEKG--RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC- 373
M +G +PDVVT N +++ LC + I A+++L M +RGC P++ T ++ L
Sbjct: 539 EMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLRE 598
Query: 374 KIKRMETVYEYLDEMEQ---KNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
K+ + E+LDE+ K L +L+ L P+ W R+ N CK
Sbjct: 599 KLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWA--RVVENLCK 654
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 174/382 (45%), Gaps = 10/382 (2%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
++N + R + AY F + +G SP +N+I+ L +AR + V M
Sbjct: 208 VINGLLREGRQLDTAYHLFDQMLDQG-LSPDVVTYNSIISALSKARAMDKAAVVLVRMVK 266
Query: 183 -PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+ N T+ LL+ Y ++ +AIGVF R G D+ + L+ +LC+
Sbjct: 267 NGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSME 326
Query: 242 AETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A F+S K + T +L+G+ G++ + ++++ +PD + +
Sbjct: 327 ARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIG 386
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
TK GK+ A+ LF M +G PD VT ++DALC ++ +A+ + + G P
Sbjct: 387 TYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTP 446
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW--- 417
+ + +LI LC + + E EM + G C PN I FN LL L K V
Sbjct: 447 DAVVFRNLIHGLCARDKWDKAEELAVEMIGR-GIC-PNNIFFNTLLNHLCKEGMVARAKN 504
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ + M R + TYN ++ Y D+ E M G+ P++ +Y MI+G
Sbjct: 505 IFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYC 564
Query: 478 DKGRLEDALSYFHEMRLKGMVP 499
GR+EDA S F +M KG+ P
Sbjct: 565 KNGRIEDAFSLFRQMASKGVNP 586
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 166/403 (41%), Gaps = 45/403 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILL 195
A FK + R+G P +N ++ L + R +E ++FD M N TYG LL
Sbjct: 292 AIGVFKRMCRDG-VEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLL 350
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FG 254
+ YA + + + D G D F L+ ++ V+ A F + +
Sbjct: 351 HGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLN 410
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA------------------ 296
D T I+++ C++G V +A + +I PD+V +
Sbjct: 411 PDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEEL 470
Query: 297 -----------------TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
T +N L K+G + A +F M + DV+T N +ID C
Sbjct: 471 AVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCL 530
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
++ EA ++L M G PN TYN++I CK R+E + +M K + P
Sbjct: 531 HGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVN--PGI 588
Query: 400 ITFNYLLKSLKKPEEVPWVLER---MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
+T++ +L+ L + E M ++G K TYN+IL +C D ++
Sbjct: 589 VTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQN 648
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + R++ +MI L GR ++A F + +G+VP
Sbjct: 649 LYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVP 691
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 158/365 (43%), Gaps = 16/365 (4%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
P+L+ TY ++++ + ++ A R G + F LL LC K A
Sbjct: 89 PNLI---TYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEA 145
Query: 243 ETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFW-----KDIIKSKCEPDSVTY 295
G ++ + I+L G C +A D + PD V+Y
Sbjct: 146 MDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSY 205
Query: 296 ATFVNALTKKGK-LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
T +N L ++G+ L TA LF M ++G PDVVT N II AL + + +A VL M
Sbjct: 206 NTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMV 265
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK--- 411
G +PN T+NSL+ C + M + P+ T+N L+ L K
Sbjct: 266 KNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRD--GVEPDVFTYNTLMGYLCKNGR 323
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
E + + M + G K ++ TY +L Y K+ H + M + G+ PD + +
Sbjct: 324 SMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNI 383
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLG 531
+I G+++DA+ F +MR +G+ P+ T +V D + + + + +L S G
Sbjct: 384 LIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEG 443
Query: 532 LKGNA 536
L +A
Sbjct: 444 LTPDA 448
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 8/226 (3%)
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ + K P+ +TY+ ++ ++ G L A + G + +T + ++ ALC KKR
Sbjct: 82 VARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKR 141
Query: 343 IPEALEV-LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM---EQKNGSCLPN 398
EA+++ LR M GC PNV +Y L+K LC R + L M + G P+
Sbjct: 142 TSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPD 201
Query: 399 EITFNYLLKSL----KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+++N ++ L ++ + + ++M G TYN I+ DK
Sbjct: 202 VVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVL 261
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
M K G P++ ++ ++HG G+ DA+ F M G+ P+
Sbjct: 262 VRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPD 307
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 162/391 (41%), Gaps = 64/391 (16%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +FN ++ + + + + +F +M PD V TYGI+++ V++A
Sbjct: 376 PDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTV---TYGIVMDALCMVGKVDDA 432
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE---------------TFFES---- 248
+ F R G D F+NL+ LC + AE FF +
Sbjct: 433 MAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNH 492
Query: 249 ---------EKNEFGY--------DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
KN F D+ T N +++G+C+ G V EA + + ++ +P+
Sbjct: 493 LCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPN 552
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
VTY T +N K G++ A LF+ M KG P +VT + I+ L +R A E+
Sbjct: 553 EVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYL 612
Query: 352 EMKNRGCLPNVTTYNSLIKHLCK-------IKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
M G ++ TYN ++ LC+ ++ + +Y +E + TFN
Sbjct: 613 WMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENR---------TFNI 663
Query: 405 LLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
++ +L K +E + + G + TY +++K + +++ + +EK G
Sbjct: 664 MIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNG 723
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ R ++ L KG + A Y ++
Sbjct: 724 CTANSRMLNALVGKLLQKGEVRKAGVYLSKI 754
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 1/209 (0%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
NE TY ++N Y +E+A +F + G + + +L L + + A E +
Sbjct: 552 NEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELY 611
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
K+ +DI T NIIL G C +A R ++++ ++ T+ ++AL K
Sbjct: 612 LWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKG 671
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G+ A LF ++ +G P+VVT ++ +L + + E ++ ++ GC N
Sbjct: 672 GRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRML 731
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
N+L+ L + + YL ++++ N S
Sbjct: 732 NALVGKLLQKGEVRKAGVYLSKIDENNFS 760
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 175/365 (47%), Gaps = 10/365 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
+++ F + ++G Y P + ++ L + + + D++ L +N+ YG L+
Sbjct: 110 SFSVFANILKKG-YEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLI 168
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFG 254
N A+ + R ++ + ++ +C+ K V E + + E
Sbjct: 169 NGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGIS 228
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ T + +++G+C+LG + +A + +I + PD T++ V+ K+G++ A +
Sbjct: 229 PDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNV 288
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
M ++G KPDVVT ++D C K++ +A + M G NV +YN +I CK
Sbjct: 289 LAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCK 348
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMST 431
IK+++ EM KN +P+ +T+N L+ L K ++ + L + M G
Sbjct: 349 IKKVDEAMNLFKEMHCKN--IIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDK 406
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TYN IL DK +M+ +G+ PD +YT++I GL GRL+DA + F +
Sbjct: 407 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFED 466
Query: 492 MRLKG 496
+ +KG
Sbjct: 467 LLVKG 471
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 161/343 (46%), Gaps = 8/343 (2%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+G+ ++L++ D N Y +++ +V EA ++ G D+
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233
Query: 226 FQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ C + A F E D+ T +I+++G+C G V EAK ++
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K +PD VTY + ++ ++ A +F M + G +V + N +I+ C K++
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE-ITFN 403
EA+ + +EM + +P+V TYNSLI LCK ++ + +DEM + +P++ IT+N
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG---VPHDKITYN 410
Query: 404 YLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
+L +L K +V +L +M+ G + TY +++ ++ +E++ K
Sbjct: 411 SILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVK 470
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G +YTVMI G D + AL+ +M G +P +T
Sbjct: 471 GYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKT 513
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 171/355 (48%), Gaps = 15/355 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++N I+D + + + E ++ EM PD+V TY L++ + + +A
Sbjct: 194 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV---TYSALISGFCILGKLNDA 250
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNG 266
IG+F++ D+ F L+ C+ V+ A+ K D+ T +++G
Sbjct: 251 IGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDG 310
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C++ V +AK + + + + +Y +N K K+ A+ LF+ M K PD
Sbjct: 311 YCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPD 370
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT N +ID LC +I AL+++ EM +RG + TYNS++ LCK +++ L
Sbjct: 371 VVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLT 430
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+M K+ P+ T+ L+ L K ++ + E + G ++ TY V+++ + +
Sbjct: 431 KM--KDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCD 488
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D DK +ME G P+ ++Y ++I L++K + A EM +G++
Sbjct: 489 NDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 155/320 (48%), Gaps = 12/320 (3%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEF-GELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
+G +L + + AI + R EF G DL F L+ + H + + F +
Sbjct: 59 FGKILGSLVKINCYQTAISL-HREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANI 117
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
K + + T+ ++ G C+ G +++A F ++ + V Y T +N L K G+
Sbjct: 118 LKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQT 177
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL+L + + K +P+VV N IID++C K + EA ++ EM ++G P+V TY++L
Sbjct: 178 SAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSAL 237
Query: 369 IKHLCKIKRMETVYEYLDEM--EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERME 423
I C + ++ ++M E+ N P+ TF+ L+ K +E VL M
Sbjct: 238 ISGFCILGKLNDAIGLFNKMISEEIN----PDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+ G K TY ++ Y +K + + M + G+ + +SY +MI+G +++
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353
Query: 484 DALSYFHEMRLKGMVPEPRT 503
+A++ F EM K ++P+ T
Sbjct: 354 EAMNLFKEMHCKNIIPDVVT 373
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 6/223 (2%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P + + +L K TA+ L + M G D+VT N +I+ + V
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+ +G PN T +LIK LC ++ + D++ N++ + L+ L
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHL--NKVCYGTLINGL 171
Query: 410 KKPEEVPWVLERMERNGCKM---STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K + L+ + R K+ + YN I+ ++ + EM KG+ PD
Sbjct: 172 CKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDV 231
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
+Y+ +I G G+L DA+ F++M + + P+ T ILV+
Sbjct: 232 VTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVD 274
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 10/218 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
+G + +N +++ + ++ E + +F EM PD+V TY L++ +
Sbjct: 329 QGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVV---TYNSLIDGLCKSG 385
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMN 261
+ A+ + D + G D + ++L LC+ V+ A K+E D+ T
Sbjct: 386 KISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYT 445
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I+++G C G + +A+ ++D++ TY + AL L M +
Sbjct: 446 ILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDN 505
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
G P+ T II +L K A ++LREM RG L
Sbjct: 506 GCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 139/272 (51%), Gaps = 18/272 (6%)
Query: 245 FFESEKNEFGYD-------------IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
FF+ ++ + G+ I T N ++NG C +G +A + D++ +PD
Sbjct: 167 FFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPD 226
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
TY T +N L K G+ A LF+ M E G +PDVVT + IID+LC +R+ EAL++
Sbjct: 227 VHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFS 286
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
MK +G PN+ TYNSLI+ LC R L+EM N +PN +TF+ L+ K
Sbjct: 287 YMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN--IMPNIVTFSLLINIFCK 344
Query: 412 PE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
E VL+ M G + + TY+ ++ Y + R ++ M KG PD S
Sbjct: 345 EGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFS 404
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
Y ++I+G R+ +A F+EM +G+ P+
Sbjct: 405 YNILINGYCKAKRIGEAKQLFNEMIHQGLTPD 436
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 182/373 (48%), Gaps = 17/373 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+A F V+R Y P + + I++ L + V +F +M PD+V T
Sbjct: 210 QAVELFDDMVAR--GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVV---T 264
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESE 249
Y +++ V EA+ +F K G ++ + +L+ LC + E + E
Sbjct: 265 YSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMM 324
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+I T ++++N +C GNV+EA+ K + + EP+ VTY++ +N + + ++
Sbjct: 325 SLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVV 384
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A +LF M KG KPDV + N +I+ C KRI EA ++ EM ++G P++ +YN+LI
Sbjct: 385 EARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLI 444
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNG 426
LC++ R+ ++ M NG+ LP+ T++ LL K + + M+
Sbjct: 445 DGLCQLGRLREAHDLFKNM-LTNGN-LPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 502
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
K + YN+++ + R + E+ +G+ P+ + YT +I+GL +G L++AL
Sbjct: 503 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEAL 562
Query: 487 SYFHEMRLKGMVP 499
F M G P
Sbjct: 563 EAFRNMEEDGCPP 575
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 140/287 (48%), Gaps = 12/287 (4%)
Query: 112 ALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARR 171
+LN +T L++N+ + +EA K ++ G P ++++++
Sbjct: 325 SLNIMPNIVTFSLLINIFCKEGNVFEAR-GVLKTMTEMG-VEPNVVTYSSLMNGYSLQAE 382
Query: 172 FVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
VE ++FD M PD+ +Y IL+N Y A + EA +F+ G D+ +
Sbjct: 383 VVEARKLFDVMITKGCKPDVF---SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVS 439
Query: 226 FQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ LC+ + A F++ N D+ T +I+L+G+C G + +A R ++ +
Sbjct: 440 YNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQ 499
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+ +P+ V Y ++A+ K L A +LF ++ +G +P+V II+ LC + +
Sbjct: 500 STYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLD 559
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
EALE R M+ GC PN +YN +I+ + K + + EM +K
Sbjct: 560 EALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREK 606
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 10/218 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N +++ +A+R E Q+F+EM PD+V +Y L++ + EA
Sbjct: 400 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIV---SYNTLIDGLCQLGRLREA 456
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM-NIILNG 266
+F G L DL + LL C+ ++ A F + ++ + M NI+++
Sbjct: 457 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 516
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C N+ EA++ + ++ +P+ Y T +N L K+G L AL F+ M E G P+
Sbjct: 517 MCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPN 576
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
+ N II K A++++ EM+ +G + +V T
Sbjct: 577 EFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 159/362 (43%), Gaps = 18/362 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P +N+I+ RARR E ++M PD++ TY L+ + + V
Sbjct: 141 APTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII---TYTALIGGFCKSRDVGR 197
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNG 266
+ + G D+ + ++ LC+ + A FE + T N ++ G
Sbjct: 198 GLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE--EMSCAPTAITYNSLIGG 255
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C G++ EA R ++ KC PD VTY T ++A K G+L A LFQ M PD
Sbjct: 256 YCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPD 315
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT ++D LC + R+ +ALE+L E+ RGC P + TYN ++ CK ++ E +
Sbjct: 316 VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVA 375
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERM-----ERNGCKMSTDTYNVILKLY 441
+ + +PN +T+N L+ + L+ + E C S Y +IL
Sbjct: 376 DFRSRGF--VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDAL 433
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
D +EEM ++G P ++ ++ L + + A EM G P P
Sbjct: 434 CRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGP 493
Query: 502 RT 503
T
Sbjct: 494 GT 495
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 160/356 (44%), Gaps = 17/356 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEA 207
+PG+ + N ++ L RA R + V+ +M PD + TY L++ + A + +A
Sbjct: 2 NPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFL---TYTKLVHGLSKARRLRDA 58
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
+ V + D + ++ LC V+ A E + + T + +++G
Sbjct: 59 VQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 118
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C + EA + + + C P VTY + + + ++ A + M +G PD
Sbjct: 119 LCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
++T +I C + + LE+L E+ RG P++ TY+++I LCK R+ + +
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 238
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM SC P IT+N L+ + +E +L +M + C TY ++ +
Sbjct: 239 EM-----SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCK 293
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D +++M + PD ++T ++ GL +GR+EDAL E+ +G P
Sbjct: 294 MGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 349
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 158/352 (44%), Gaps = 38/352 (10%)
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVE 205
V+R G ++P ++ ++D L +A R + + +F+EM TY L+ Y A ++
Sbjct: 205 VTRRG-FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMD 263
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILN 265
EAI + G++ D ++ D+ T +++
Sbjct: 264 EAI------RLLGKMVD----------------------------DKCAPDVVTYTTLMS 289
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+C +G + +A ++ ++ +K PD VT+ + V+ L +G++ AL L + + +G P
Sbjct: 290 AFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 349
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ T NC++D C ++ +A E++ + ++RG +PN TYN L+ C+ R + +YL
Sbjct: 350 TIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYL 409
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
D++ + G C + + +L +L + ++ E M + G + T+ ++
Sbjct: 410 DQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALC 469
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+ EEM K G P + ++ G ++ A E+RL
Sbjct: 470 KAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 521
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 160/340 (47%), Gaps = 26/340 (7%)
Query: 163 LDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
L ++G ARR PD T L+ + +A+ EA RR D
Sbjct: 87 LRLVGSARR-----------PD---AGTCAALIKKLSASGRTAEA-----RRVLAACGPD 127
Query: 223 LSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ A+ ++ C V+ A + E D T + ++ G C G A +
Sbjct: 128 VMAYNAMMAGYCGAGQVDAARRWCAERAVE--RDAYTCDTLIRGLCGRGRTANALAVLDE 185
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+++ +C PD VTY + A K+ A++L M +KG PD+VT N +++ +C + R
Sbjct: 186 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 245
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ +A+E L+ + + GC PN +YN ++K LC +R E E + EM QK C PN +TF
Sbjct: 246 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG--CPPNVVTF 303
Query: 403 NYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
N L+ L + E VLE++ + GC ++ +YN +L + DK + M
Sbjct: 304 NMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 363
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+G PD SY ++ L G ++ A+ H+++ KG P
Sbjct: 364 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP 403
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 155/317 (48%), Gaps = 9/317 (2%)
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILN 265
A+ V D + D+ + LL C+ + A + +++ DI T N+++N
Sbjct: 179 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 238
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G V +A F K++ CEP++V+Y + L + A L M +KG P
Sbjct: 239 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 298
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+VVT N +I LC K + ALEVL ++ GC PN +YN L+ CK K+M+ +L
Sbjct: 299 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFL 358
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYV 442
D M + C P+ +++N LL +L + EV +E +++ GC +YN ++
Sbjct: 359 DLMVSRG--CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLT 416
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ EM KG+ PD +Y+ + GL + R+EDA+ F +++ G+ P
Sbjct: 417 KAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT- 475
Query: 503 TGILVNDMNIKLKERGE 519
+L N + + L +R E
Sbjct: 476 --VLYNAIILGLCKRRE 490
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 173/358 (48%), Gaps = 25/358 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +L+ + + + +++ DEM PD+V TY +++N V++A
Sbjct: 193 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIV---TYNVVVNGICQEGRVDDA 249
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNG 266
I +G + ++ +L LC + E AE E + ++ T N++++
Sbjct: 250 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 309
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G V A + I K C P+S++Y ++A K+ K+ A+ M +G PD
Sbjct: 310 LCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPD 369
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+V+ N ++ ALC + A+E+L ++K++GC P + +YN++I L K + + E L+
Sbjct: 370 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN 429
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN-VILKLYV 442
EM K P+ IT++ + L + E+ +++ G + +T YN +IL L
Sbjct: 430 EMVSKGLQ--PDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL-- 485
Query: 443 NWDCEDKVRHT----WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
C+ + H+ + M G P++ +YT++I GL +G +++A E+ +G
Sbjct: 486 ---CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
+ +L ++G+L ALRL + R+PD TC +I L R EA VL C
Sbjct: 74 LRSLVRRGELDEALRLVGS----ARRPDAGTCAALIKKLSASGRTAEARRVL-----AAC 124
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEV 415
P+V YN+++ C +++ + E + + T + L++ L +
Sbjct: 125 GPDVMAYNAMMAGYCGAGQVDAARRWCAERAVER-----DAYTCDTLIRGLCGRGRTANA 179
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
VL+ M R C TY ++L+ + +EM KG PD +Y V+++G
Sbjct: 180 LAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 239
Query: 476 LYDKGRLEDALSYFHEMRLKGMVP 499
+ +GR++DA+ + + G P
Sbjct: 240 ICQEGRVDDAIEFLKNLPSYGCEP 263
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 77/195 (39%), Gaps = 13/195 (6%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF---VELIQVFDE---MPDLVNEK 189
+ A F + G Y P +N +L L R+ VEL+ + P L+
Sbjct: 351 MDKAMAFLDLMVSRGCY-PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI--- 406
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
+Y +++ A +EA+ + + G D+ + + LCR +E A F +
Sbjct: 407 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF-GK 465
Query: 250 KNEFGYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ G T+ N I+ G C + A + +I + C P+ TY + L +G
Sbjct: 466 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 525
Query: 308 LGTALRLFQAMWEKG 322
+ A L + +G
Sbjct: 526 IKEARDLLDELCSRG 540
>gi|296088471|emb|CBI37462.3| unnamed protein product [Vitis vinifera]
Length = 673
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 189/404 (46%), Gaps = 40/404 (9%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNA 161
+ + + ++EKAL+ + LT DL++ ++ + F+ + A+ FF W + YS +N
Sbjct: 246 NANPESDMEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQDCYSHEPRAYNE 305
Query: 162 ILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
++D+L + V+ ++ +M D + D++ E+
Sbjct: 306 MIDILSSTKYKVKQFRIVCDMLDYMKRN----------------------DKKSVPVEV- 342
Query: 222 DLSAFQNLLLWLCRY--KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
LL+ L +Y KH+ F + +K + + L + N R
Sbjct: 343 -------LLMILRKYTEKHLAHLHKFAKKKKIRVKTQPEINALNLLLDALCKNPSRGMRV 395
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR---KPDVVTCNCIIDA 336
+++I+ PDS TY T +++ K G + A LF+ M KG P T +I A
Sbjct: 396 LEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILA 455
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
L R E +++++M N G LP+V+TY +I+ +C ++E Y++L+EM N
Sbjct: 456 LVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEM--GNKGYR 513
Query: 397 PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
P+ +T+N L L KK EE + RM GC S T+N+++ ++ D T
Sbjct: 514 PDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFET 573
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
W EM+K+G D +Y VMI GL++ ++EDA E+ KG+
Sbjct: 574 WHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVVNKGI 617
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 82/209 (39%), Gaps = 37/209 (17%)
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL---PNVTTYNS 367
+R+ + M E G PD T N ID+ C + EA E+ M+ +G P TY
Sbjct: 392 GMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAI 451
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC 427
+I L + R E ++ + +M N LP+ T+ +++ + +V
Sbjct: 452 MILALVQSDRTEECFKLIKDM--INSGVLPDVSTYKQVIEGMCLAGKV------------ 497
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ Y + EEM KG PD +Y + L + + E+AL
Sbjct: 498 ---EEAYKFL-----------------EEMGNKGYRPDIVTYNCFLDVLCENKKSEEALG 537
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKE 516
+ M G VP T ++ M ++ E
Sbjct: 538 LYGRMIEAGCVPSVHTFNMLISMFFEIGE 566
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 60/160 (37%), Gaps = 31/160 (19%)
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
K + VL EM G P+ TYN+ I CK + E + M K
Sbjct: 387 KNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKG-------- 438
Query: 401 TFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
++ P + TY +++ V D ++ ++M
Sbjct: 439 ------STMSSP-----------------TAKTYAIMILALVQSDRTEECFKLIKDMINS 475
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
G+ PD +Y +I G+ G++E+A + EM KG P+
Sbjct: 476 GVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPD 515
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 160/323 (49%), Gaps = 14/323 (4%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V T+ L+N + + +EEA+ + ++ E G D+ + ++ LC+ HV A
Sbjct: 140 PDIV---TFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 243 ETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ F+ +N +G D+ ++NG C G +A + + K K +PD +T+ ++
Sbjct: 197 LSLFDQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A K+GK A L+ M P++ T +I+ C + + EA ++ M+ +GC P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPW 417
+V Y SLI CK K+++ + EM QK + N IT+ L++ + KP
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT--GNTITYTTLIQGFGQVGKPNVAQE 373
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK---GMGPDQRSYTVMIH 474
V M G + TYNV+L K +E+M+K+ G+ P+ +Y V++H
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 475 GLYDKGRLEDALSYFHEMRLKGM 497
GL G+LE AL F +MR + M
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREM 456
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 137/296 (46%), Gaps = 6/296 (2%)
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIIL 264
EA+ +F E L + F LL + + K +V + + +D+ T N+++
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N +C Y A F ++K EPD VT+ + +N ++ A+ + M E G K
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDVV IID+LC + AL + +M+N G P+V Y SL+ LC R
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLY 441
L M ++ P+ ITFN L+ + K + + M R + TY ++ +
Sbjct: 235 LRGMTKRKIK--PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
C D+ R + ME KG PD +YT +I+G +++DA+ F+EM KG+
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 161/372 (43%), Gaps = 19/372 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILL 195
W A+ ++ + R G +S FN LD+ F +++ +P +++ + LL
Sbjct: 33 WVRAFCNYREILRNGLHSLQ---FNEALDL------FTHMVES-RPLPSIID---FTKLL 79
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFG 254
N A + I + D + G DL L+ C+ +A +F + K F
Sbjct: 80 NVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFE 139
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
DI T ++NG+C+ + EA +++ +PD V Y T +++L K G + AL L
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M G +PDVV +++ LC R +A +LR M R P+V T+N+LI K
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMST 431
+ E +EM + S PN T+ L+ +E + ME GC
Sbjct: 260 EGKFLDAEELYNEMIRM--SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
Y ++ + D + EM +KG+ + +YT +I G G+ A F
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 492 MRLKGMVPEPRT 503
M +G+ P RT
Sbjct: 378 MVSRGVPPNIRT 389
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 149/320 (46%), Gaps = 15/320 (4%)
Query: 117 ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI 176
++ + L+ + N R W A + + +++ P FNA++D + +F++
Sbjct: 211 DVVMYTSLVNGLCNSGR--WRDADSLLRGMTKR-KIKPDVITFNALIDAFVKEGKFLDAE 267
Query: 177 QVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
++++EM + N TY L+N + V+EA +F + G D+ A+ +L+
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Query: 234 CRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
C+ K V+ A + F+E + + T ++ G+ +G A+ + ++ P+
Sbjct: 328 CKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEK---GRKPDVVTCNCIIDALCFKKRIPEALEV 349
TY ++ L GK+ AL +F+ M ++ G P++ T N ++ LC+ ++ +AL V
Sbjct: 388 RTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMV 447
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+M+ R + TY +I+ +CK +++ + K PN +T+ ++ L
Sbjct: 448 FEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK--PNVVTYTTMISGL 505
Query: 410 KK---PEEVPWVLERMERNG 426
+ E + +M+ +G
Sbjct: 506 FREGLKHEAHVLFRKMKEDG 525
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 180/387 (46%), Gaps = 22/387 (5%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGIL 194
A F+ + G + P +N ++D L +A E ++ +M + N TY +L
Sbjct: 234 AGMELFEELVERG-HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVL 292
Query: 195 LNRYAAAHMVEEAIGVFDR--RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN- 251
+N ++EA + RK L ++ + + L LC+ A S ++
Sbjct: 293 INGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDG 352
Query: 252 --EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
D T + +++G C G + EA + D+I P+ +TY VN L K K+
Sbjct: 353 SLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKME 412
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A + ++M +KG PDV+T + ++DA C R+ EALE+L M +RGC PNV T+NS+I
Sbjct: 413 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 472
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
LCK R ++ D+M K+G +P++IT+ L+ L + + +L+ M
Sbjct: 473 DGLCKSDRSGEAFQMFDDMALKHG-LVPDKITYCTLIDGLFRTGRAGQAEALLDAMP--- 528
Query: 427 CKMSTDTY--NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
DTY N + + + M + + PD+ ++ ++I G G E
Sbjct: 529 ---DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQ 585
Query: 485 ALSYFHEMRLKGMVPEPRT-GILVNDM 510
A + F EM K + P+ T G L++ +
Sbjct: 586 ASALFEEMVAKNLQPDVMTFGALIDGL 612
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 184/396 (46%), Gaps = 51/396 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL--VNEK-TYGILLNRYAAAHMVEEAIGV 210
P + FN ++ L + +QV++ M +L V +K T+ IL+ A E+A +
Sbjct: 530 PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASAL 589
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCV 269
F+ D+ F L+ LC+ VE A + N ++ T N +++G C
Sbjct: 590 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 649
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT-------------------------- 303
G + EA +F ++++ S C PDS+TY + V AL
Sbjct: 650 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 709
Query: 304 ---------KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
K G+ A+ + + M KG PDVVT N +ID+LC + EA + +M
Sbjct: 710 YNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 769
Query: 355 NR---GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+R C+PNV TY+ LI LCK+ R++ E + EM +K+ LPN IT+N L L K
Sbjct: 770 SRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCK 829
Query: 412 PEEVPWVLERME--RNGC-KMSTDTYNVILKLYVNWDCE----DKVRHTWEEMEKKGMGP 464
+ E M R+G ++S DT V ++ C+ D+ + +++M G P
Sbjct: 830 QSMMAEACELMRSLRDGSLRVSPDT--VTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVP 887
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ +Y V+++GL ++E A + M KG+ P+
Sbjct: 888 NVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPD 923
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 200/441 (45%), Gaps = 27/441 (6%)
Query: 102 SVSTKGEIEKALN----QCELTLTDD------LIVNVINRYRFDWEAAYTFFKWVSREGD 151
+S G++ +AL EL L D LI F+ +A+ F + V++ +
Sbjct: 541 GLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFE-QASALFEEMVAK--N 597
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAI 208
P F A++D L +A + + D M +L N TY L++ + +EEA
Sbjct: 598 LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEAC 657
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNG 266
+ G + D + +L+ LCR + A SE FG+D T+ NI+++G
Sbjct: 658 QFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV-SELKSFGWDPDTVTYNILVDG 716
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK-- 324
G +A ++++ PD VTY T +++L K G L A RL M + +
Sbjct: 717 LWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCC 776
Query: 325 -PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC--LPNVTTYNSLIKHLCKIKRMETV 381
P+VVT + +I+ LC RI EA E+++EM + C LPN+ TYNS + LCK M
Sbjct: 777 VPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEA 836
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVIL 438
E + + + P+ +TF+ L+ L K +E V + M G + TYNV++
Sbjct: 837 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLM 896
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D ++ E M KG+ PD +Y+V++ +++AL H M +G
Sbjct: 897 NGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCT 956
Query: 499 PEPRTGILVNDMNIKLKERGE 519
P T + D K + GE
Sbjct: 957 PNVVTFNSIIDGLCKSDQSGE 977
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 179/403 (44%), Gaps = 13/403 (3%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
+ AL C+ L + ++ + + E F+ W + + FN L++L
Sbjct: 63 SVVAALRGCKGRLHPSVAAAILAQLDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLV 122
Query: 168 RARRFVELIQVF-DEMPDLV--NEKTYGILLNR-YAAAHMVEEAIGVFDRRKEFGELDDL 223
++ + I +F +P N TY LL Y A VE +G F R + +
Sbjct: 123 KSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRS--V 180
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESE--KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ + +L LCR A F E ++ I T N I+NG C + ++
Sbjct: 181 ADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFE 240
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
++++ PD VTY T +++L K G L A RL M + P+VVT + +I+ LC
Sbjct: 241 ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVG 300
Query: 342 RIPEALEVLREMKNRGC--LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
RI EA E+++EM + C LPN+ TYNS + LCK E + + + P+
Sbjct: 301 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 360
Query: 400 ITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
+TF+ L+ L K +E V + M G + TYN ++ D ++ E
Sbjct: 361 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 420
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
M KG+ PD +Y+V++ R+++AL H M +G P
Sbjct: 421 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 463
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 195/443 (44%), Gaps = 50/443 (11%)
Query: 105 TKGEIEKALNQCELTLTDDLIVNVINRYRFDW--------------------EAAYTFFK 144
T G + AL C + TDD + V F W E A T +
Sbjct: 674 TYGSLVYAL--CRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLE 731
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV------NEKTYGILLNRY 198
+ +G + P +N ++D L +A E ++ +M V N TY +L+N
Sbjct: 732 EMVGKG-HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGL 790
Query: 199 AAAHMVEEAIGVFDR--RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN---EF 253
++EA + RK L ++ + + L LC+ + A S ++
Sbjct: 791 CKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRV 850
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
D T + +++G C G EA + D+I P+ VTY +N L K K+ A
Sbjct: 851 SPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHA 910
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+ ++M +KG PDV+T + ++DA C + EALE+L M +RGC PNV T+NS+I LC
Sbjct: 911 MIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLC 970
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMS 430
K + ++ D+M K+G P++IT+ L+ L + + +L+ M
Sbjct: 971 KSDQSGEAFQMFDDMTLKHG-LAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP------D 1023
Query: 431 TDTY--NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
DTY N + + H E+E + PD+ ++ ++I G G E A +
Sbjct: 1024 PDTYAFNCCINGLSKLGDVSRALHRMLELE---LVPDKVTFNILIAGACKAGNFEQASAL 1080
Query: 489 FHEMRLKGMVPEPRT-GILVNDM 510
F EM K + P+ T G L++ +
Sbjct: 1081 FEEMVAKNLQPDVMTFGALIDGL 1103
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 129/252 (51%), Gaps = 10/252 (3%)
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWK-DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
+ NI+L C G A ++ ++ + P VTY T +N L K +LG + LF
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ + E+G PDVVT N +ID+LC + EA + +M +R C+PNV TY+ LI LCK+
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME--RNGC-KMSTD 432
R++ E + EM +K+ LPN IT+N L L K E M R+G ++S D
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 359
Query: 433 TYNVILKLYVNWDCE----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
T V ++ C+ D+ +++M G P+ +Y +++GL ++E A +
Sbjct: 360 T--VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 417
Query: 489 FHEMRLKGMVPE 500
M KG+ P+
Sbjct: 418 IESMVDKGVTPD 429
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 169/375 (45%), Gaps = 22/375 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
EA F ++ G Y P +NA+++ L +A + + + M PD++ T
Sbjct: 378 EACSVFDDMIA--GGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI---T 432
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y +L++ + A V+EA+ + G ++ F +++ LC+ A F+
Sbjct: 433 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMA 492
Query: 251 NEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ G D T +++G G +A+ ++ + +PD+ + +N L+K G +
Sbjct: 493 LKHGLVPDKITYCTLIDGLFRTGRAGQAEA----LLDAMPDPDTYAFNCCINGLSKLGDV 548
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL+++ M E PD VT N +I C +A + EM + P+V T+ +L
Sbjct: 549 SRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGAL 608
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERN 425
I LCK ++E + LD M N PN +T+N L+ L K EE LE M +
Sbjct: 609 IDGLCKAGQVEAARDILDLM--GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSS 666
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
GC + TY ++ D E++ G PD +Y +++ GL+ G+ E A
Sbjct: 667 GCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQA 726
Query: 486 LSYFHEMRLKGMVPE 500
++ EM KG P+
Sbjct: 727 ITVLEEMVGKGHHPD 741
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 110/269 (40%), Gaps = 39/269 (14%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + F+ ++D L + + E VFD+M P++V TY +L+N +E
Sbjct: 851 SPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVV---TYNVLMNGLCKTDKMER 907
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILN 265
A + + + G D+ + L+ C+ HV E E ++ T N I++
Sbjct: 908 AHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIID 967
Query: 266 GWCVLGNVYEAKRFWKDI-IKSKCEPDSVTYATFVNALTKKG------------------ 306
G C EA + + D+ +K PD +TY T ++ L + G
Sbjct: 968 GLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTY 1027
Query: 307 ----------KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
KLG R M E PD VT N +I C +A + EM +
Sbjct: 1028 AFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 1087
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
P+V T+ +LI LCK ++E ++ +
Sbjct: 1088 NLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 166/363 (45%), Gaps = 24/363 (6%)
Query: 154 PGSNV----FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYA-AAH 202
PGS + + +L L RA R+ +++F E+ P LV TY ++L+ Y
Sbjct: 167 PGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLV---TYNVVLDVYGRMGR 223
Query: 203 MVEEAIGVFDRRKEFG-ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKT 259
+ + D + G E DD +A ++ CR V+ A FFE K G+ + T
Sbjct: 224 SWPRIVALLDEMRAAGVEPDDFTA-STVIAACCRDGLVDEAVAFFEDLKAR-GHTPCVVT 281
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N +L + GN EA R K++ + C+PD+VTY + G A + M
Sbjct: 282 YNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMT 341
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
KG P+ T N ++ A ++ EAL + +MK GC+PNV TYN ++ L K R
Sbjct: 342 SKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFT 401
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNV 436
+ E L EM + C PN +T+N +L K + V VLE M+ G ++S DTYN
Sbjct: 402 VMLEMLGEMSRSG--CTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNT 459
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ Y + EM G P +Y +++ L +G A S +MR KG
Sbjct: 460 LIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKG 519
Query: 497 MVP 499
P
Sbjct: 520 FKP 522
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 172/412 (41%), Gaps = 30/412 (7%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A FF+ + G ++P +NA+L V G+A + E ++V EM PD V TY
Sbjct: 263 AVAFFEDLKARG-HTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAV---TYN 318
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKN 251
L YA A EEA D G L + + ++ V+ A F+ +K+
Sbjct: 319 ELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKS 378
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRF------WKDIIKSKCEPDSVTYATFVNALTKK 305
++ T N I LG + + RF ++ +S C P+ VT+ T + K+
Sbjct: 379 GCVPNVNTYNFI------LGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKR 432
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G R+ + M G + T N +I A A ++ EM + G P +TTY
Sbjct: 433 GMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTY 492
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERN 425
N+L+ L + T + +M K PN+ +++ LL+ K + + + +E+
Sbjct: 493 NALLNVLSRQGDWSTAQSIVSKMRTKGFK--PNDQSYSLLLQCYAKGGNIAGI-DAIEKE 549
Query: 426 GCKMSTDTYNVILKLYV--NWDCE--DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
+ VIL+ V N+ C + ++E++ +G PD + M+ G
Sbjct: 550 VYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGM 609
Query: 482 LEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLK 533
F ++ G+ P+ T + DM K E E K + +L S +K
Sbjct: 610 YSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVK 661
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 121/284 (42%), Gaps = 22/284 (7%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
T + ++NV++R + DW A + + +G + P ++ +L + +
Sbjct: 491 TYNALLNVLSR-QGDWSTAQSIVSKMRTKG-FKPNDQSYSLLLQCYAKGGNIAGI----- 543
Query: 181 EMPDLVNEKTYG-------ILLNRYAAAHMVEEAIG----VFDRRKEFGELDDLSAFQNL 229
D + ++ YG ++L A+ +G F K G DL F ++
Sbjct: 544 ---DAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSM 600
Query: 230 L-LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
L ++ + +V E F +++ D+ T N +++ + +EA++ + S+
Sbjct: 601 LSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQV 660
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
+PD V+Y T +N K+G + A R+ M G P VVT + ++ + EA E
Sbjct: 661 KPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEARE 720
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
V+ M P TY ++ CK KR E +L E+ + +
Sbjct: 721 VINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEVSETD 764
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 137/314 (43%), Gaps = 19/314 (6%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYR--FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVL 166
+ + + C + L+ D +I Y A+ + ++ G ++P +NA+L+VL
Sbjct: 441 VLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAG-FAPCLTTYNALLNVL 499
Query: 167 GR------ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
R A+ V ++ P N+++Y +LL YA + I ++ G +
Sbjct: 500 SRQGDWSTAQSIVSKMRTKGFKP---NDQSYSLLLQCYAKGGNIA-GIDAIEKEVYGGTV 555
Query: 221 -DDLSAFQNLLL--WLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
+ L++ + CR + + + F E + + D+ N +L+ + G +
Sbjct: 556 FPSWVILRTLVIANFKCR-RLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVT 614
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+ I +S PD +TY + ++ K + A ++ + KPDVV+ N +I+
Sbjct: 615 EIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGF 674
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C + I EA +L EM G P V TY++L+ ++ E ++ M Q N P
Sbjct: 675 CKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHN--LKP 732
Query: 398 NEITFNYLLKSLKK 411
E+T+ ++ S K
Sbjct: 733 MELTYRRVVDSYCK 746
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 396 LPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDT--YNVILKLYVNWDCEDKVRHT 453
LP +I LLK+L+ W L + G + + D ++++ D V
Sbjct: 102 LPADIP--SLLKALELSGHWEWALALLRWAGAEGAADASALEMVVRALGREGQHDAVCAL 159
Query: 454 WEEME-KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNI 512
+EM G D R+YT ++H L GR E A+ F E+R +G+ P T N+
Sbjct: 160 LDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVT------YNV 213
Query: 513 KLKERGEQGKKVIKLTSL 530
L G G+ ++ +L
Sbjct: 214 VLDVYGRMGRSWPRIVAL 231
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 202/408 (49%), Gaps = 16/408 (3%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
T L++N + + D + A F + EG P + +L L + + +Q+F+
Sbjct: 635 TYSLVINCLCKSD-DVDQALDVFGRMKEEG-MEPLLGNYKTLLSSLVKDEKIDFALQIFN 692
Query: 181 EMPD--LVNEK-TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
E+ + LV + Y I++N ++ V+EA + D K L DL + +LL L +
Sbjct: 693 ELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSG 752
Query: 238 HVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
+E A F ++ E G+ D+ +++ G + A ++ + K +C PD VTY
Sbjct: 753 RLEEAFNMF-TKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTY 811
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
++ +++L K+G++ A F+ KG P+V + +ID+ K + ALE+ EM+
Sbjct: 812 SSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR 871
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---P 412
R C PN+ TYN+L+ L K R+ + L+EME+ C+P+ +T+N L+ + K
Sbjct: 872 RQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG--CVPDLVTYNILIDGVGKMGMV 929
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+E +RM+ G T+ +++ D + ++ ME++G P +Y V+
Sbjct: 930 DEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVL 989
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQ 520
I L G++ +A FHEM++KG +P+ GI + M L R +Q
Sbjct: 990 IDILGRAGKVHEAAMIFHEMKVKGCMPD---GITIGIMKRILSVREQQ 1034
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 194/469 (41%), Gaps = 76/469 (16%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
E+ K L + + L L+ +V+ + D A FF W ++ YS + ++ L
Sbjct: 135 EMGKQLERLKFKLNPGLVCDVVVNQK-DLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLA 193
Query: 168 RARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
A+ ++Q+ M ++ LL + + + V A+ +F++ K FG +
Sbjct: 194 GAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTN 253
Query: 225 AFQNLLLWLCR--YKHVEV----------------------------------AETFFES 248
+ +L L + + H V AE E
Sbjct: 254 MYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEM 313
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
K+ + T ++++ GN+ EA +F+ + +C P+ VTY T VN L K G+L
Sbjct: 314 IKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRL 373
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A +F M E PD + N +ID L A + +EMK+RG +PN+ TYN +
Sbjct: 374 EEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIM 433
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL----ERMER 424
I L K R ++ +++++ +P+ T+N L+ L K ++ VL E +E+
Sbjct: 434 ISVLGKAGRQPEAWQLFHDLKEQG--AVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEK 491
Query: 425 NG-CKMSTD-----------------------------TYNVILKLYVNWDCEDKVRHTW 454
G C +S D TYN ++ +++ D+
Sbjct: 492 GGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLL 551
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
E M+K P +YT ++ GL GRL++A+S EM +G P T
Sbjct: 552 EVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVT 600
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 185/394 (46%), Gaps = 42/394 (10%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P +N++N +L++L + + + VF ++ PD +T+ I ++ + + ++
Sbjct: 249 NPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPD---AQTFRIFVHSFNRSGRLDP 305
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILN 265
A + G + F L+ L + +++ A FF KN ++ T ++N
Sbjct: 306 AAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVN 365
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G + EA + ++ ++ C PD++ Y T ++ L K G+ A LF+ M ++G P
Sbjct: 366 GLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVP 425
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
++ T N +I L R PEA ++ ++K +G +P+V TYN+LI L K +M+ V +
Sbjct: 426 NLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAII 485
Query: 386 DEMEQKNGSCL----------------------PN-------EITFNYLLKSL---KKPE 413
EM +K G C+ P+ EIT+N L+ + +
Sbjct: 486 KEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVD 545
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
E +LE M+++ C + TY ++ D+ EMEK+G P +Y+ ++
Sbjct: 546 EAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLM 605
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
Y + + E++LS F EM KG V + T LV
Sbjct: 606 ASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLV 639
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 189/402 (47%), Gaps = 42/402 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
EA F + +E + SP + +N ++D LG+A +F EM D + N +TY I
Sbjct: 375 EACEVFVEM--KENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNI 432
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV--------EVAETF 245
+++ A EA +F KE G + D+ + L+ L + + E+ E
Sbjct: 433 MISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492
Query: 246 FE---SEKNEFGYDIK---------------------TMNIILNGWCVLGNVYEAKRFWK 281
E S + G++ T N +++ + G+V EA + +
Sbjct: 493 GECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLE 552
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+ K +C P VTY T V+ L K G+L A+ L + M ++G +P VVT + ++ + +
Sbjct: 553 VMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRD 612
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ E+L + EM +GC+ +V+TY+ +I LCK ++ + M+++ L
Sbjct: 613 QEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLG--N 670
Query: 402 FNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
+ LL SL K E++ + L+ ++ + T YN+++ V + D+ + M+
Sbjct: 671 YKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMK 730
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ + PD +YT ++ GL GRLE+A + F +M +G P+
Sbjct: 731 NQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPD 772
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E AY FF+ +G +P V+++++D G+ +++F+EM P++V T
Sbjct: 825 EEAYYFFENSISKG-CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIV---T 880
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y LL+ A A + A + + ++ G + DL + L+ + + V+ AE++F+ K
Sbjct: 881 YNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMK 940
Query: 251 NE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ D+ T ++ + + EA + + + P VTY ++ L + GK+
Sbjct: 941 EKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVH 1000
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
A +F M KG PD +T + L +++ ALE
Sbjct: 1001 EAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQFHALE 1039
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 179/378 (47%), Gaps = 14/378 (3%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT-----Y 191
++A + + + + G Y P + +++ L +A + E + M ++ ++ Y
Sbjct: 391 DSALSLLETMIKRG-YCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSY 449
Query: 192 GILLNRYAAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
LLN A V +A +F E + D+ ++ L+ C+ + AE ++
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 509
Query: 251 N-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ ++ T N LNG G + +A+ +++++ + C PD +TY+T ++ + K
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A LF+ M +G +P+ VT NC++ LC + + EA E+ R+M RGC P+ TY +L+
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLL 629
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
C + ++E E DEM K P+ + +N LLK KP E + + M
Sbjct: 630 YGFCNVGKIEQAVEVFDEMVSKGHD--PDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQ 687
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLEDA 485
CK T ++N+++ D +E ME+ G PD +Y +I GL + RL +A
Sbjct: 688 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 747
Query: 486 LSYFHEMRLKGMVPEPRT 503
+ F E+ + P+P
Sbjct: 748 MKVFKEIDRLKLSPDPHA 765
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 177/453 (39%), Gaps = 79/453 (17%)
Query: 126 VNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD- 184
V + ++ D A TFF+W+ ++ +N +LD L R R + QVF++M
Sbjct: 100 VGAVIKHLRDGGEALTFFRWLQAR-NFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQ 158
Query: 185 --LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL-CRYKHVEV 241
+ N TY +L+ +EA+ F + G + +Q + L K E
Sbjct: 159 GVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEF 218
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA----- 296
+ F + ++ +L + + EA + ++ ++KS C+PD+ Y+
Sbjct: 219 SRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLA 278
Query: 297 -------------------------------TFVNALTKKGKLGTALR------------ 313
F++ L K GK+ A
Sbjct: 279 HCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSS 338
Query: 314 ------LFQAMWEKGR----------------KPDVVTCNCIIDALCFKKRIPEALEVLR 351
L + + E GR +P TC+ +I LC R+ AL +L
Sbjct: 339 QPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLE 398
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
M RG P++ T++ LI LCK +++ E+L M++K S + ++N LL SL K
Sbjct: 399 TMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCK 458
Query: 412 PEEVPWVLERMERNGCKMS----TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
++V + S +Y++++ + D + +++M P+
Sbjct: 459 AKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVT 518
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+Y ++GL KGR+ DA + EM G P+
Sbjct: 519 TYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPD 551
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 6/284 (2%)
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
A+ L LC+ +E A + + ++++ G + +A+ +I
Sbjct: 307 AWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIA 366
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+P S T + + L K G++ +AL L + M ++G PD+ T + +I+ LC +I
Sbjct: 367 GRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQ 426
Query: 345 EALEVLREMKNR--GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
EA E L+ M + + +YNSL+ LCK K++ + M + S +P+ +++
Sbjct: 427 EAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSER-SFVPDVVSY 485
Query: 403 NYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
+ L+ K +E+ + ++M C + TYN L + + +EEM
Sbjct: 486 SILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVA 545
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G PD +Y+ +IHG + + A F M +G P T
Sbjct: 546 AGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVT 589
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 118/241 (48%), Gaps = 17/241 (7%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP ++ ++ AR+ + ++F+ M P+ V TY LL+ +E
Sbjct: 549 SPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAV---TYNCLLHGLCKESKPDE 605
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F + E G D + LL C +E A E F E D+ N +L
Sbjct: 606 AHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLK 665
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM-WEKGRK 324
G+ G EAK+ ++ ++ +C+PD+V++ ++ L+K +L A+ +F+ M + G
Sbjct: 666 GFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCS 725
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL-CKIKRMETVYE 383
PD+VT N +I LC ++R+ EA++V +E+ P+ +N L++ + C I VY+
Sbjct: 726 PDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKCGI-----VYQ 780
Query: 384 Y 384
+
Sbjct: 781 F 781
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 129/298 (43%), Gaps = 15/298 (5%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESE------KNEFGYDIKTMNIILNGWCVLGNVYE 275
D+ + LL L R++ ++ A FE N F Y +++ C N E
Sbjct: 128 DVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTY-----AVLVQSSCYERNSDE 182
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A RF+ +++ +P S Y L GK G R+F EK +++ ++
Sbjct: 183 AVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLV 242
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
+ + EA ++ R M GC P+ T Y+ ++ CK++ ++ ++ EM ++ +
Sbjct: 243 NFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAP 302
Query: 396 LPNEITFNYLLKSLKKPEEVPWVLE--RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
L N + + L L K ++ E R + S Y+++++L + DK
Sbjct: 303 L-NNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEA 361
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
E+ + + P + +I L GR++ ALS M +G P+ T +L+N++
Sbjct: 362 CLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINEL 419
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 107/244 (43%), Gaps = 11/244 (4%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA F++ + + D TY ++ L + L A ++F+ M +G P+ T ++
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL-CKIKRMETVYEYLDEMEQKNG 393
+ C+++ EA+ EM ++G P+ T Y + + L K E + ++E++
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231
Query: 394 S--CLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
L + N++++ K E + M ++GCK Y+ ++ + + D+
Sbjct: 232 VEMMLKKALLVNFVIQD--KAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAF 289
Query: 452 HTWEEMEKKGMGP-DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDM 510
+ EM + P + ++T + GL G++E A M+ +P V DM
Sbjct: 290 KLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQP-----VYDM 344
Query: 511 NIKL 514
I+L
Sbjct: 345 LIRL 348
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 184/429 (42%), Gaps = 82/429 (19%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + FN ++ L RA + I + ++MP + +EKT+ ++ Y ++ A+ +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRI 246
Query: 211 FDRRKEFG-----------------------------ELD-------DLSAFQNLLLWLC 234
++ EFG E+ D F L+ LC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 235 RYKHVEVAETFFESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
+ HV+ A + E GYD + T N +++G C LG V EA F +I C P++
Sbjct: 307 KAGHVKHAIEIMDVMLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNT 365
Query: 293 VTYATFVN----------------ALTKKGKLG-------------------TALRLFQA 317
VTY T ++ LT KG L A+ LF+
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M KG +PD T N +ID+LC K ++ EAL +L++M+ GC +V TYN+LI CK +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTY 434
+ E DEME S N +T+N L+ L ++ E+ ++++M G K TY
Sbjct: 486 IREAEEIFDEMEVHGVS--RNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTY 543
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N +L + K + M G PD +Y +I GL GR+E A +++
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 495 KGMVPEPRT 503
KG+ P
Sbjct: 604 KGIALTPHA 612
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 197/442 (44%), Gaps = 54/442 (12%)
Query: 100 TCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVF 159
+ ++S AL+ ++ L D L R + D AA F S++ ++SP ++
Sbjct: 33 SSTISFASPNSAALSSSDVKLLDSL------RSQADDSAALRLFNLASKKPNFSPEPALY 86
Query: 160 NAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFD-RRK 215
IL LGR+ F ++ ++ ++M + + + IL+ YA + +E +GV
Sbjct: 87 EEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMID 146
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+FG D + +L L ++++ E ++ + +G D+ T N+++ C +
Sbjct: 147 DFGLKPDTHFYNRMLNLLVDGNNLKLVE-IAHAKMSVWGIKPDVSTFNVLIKALCRAHQL 205
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
A +D+ PD T+ T + ++G L ALR+ + M E G V+ N I
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265
Query: 334 IDALCFKKRIPEALEVLREMKNR------------------------------------G 357
+ C + R+ +AL ++EM N+ G
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EE 414
P+V TYNS+I LCK+ ++ E+LD+M ++ C PN +T+N L+ +L K EE
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRD--CSPNTVTYNTLISTLCKENQVEE 383
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+ + G T+N +++ +EEM KG PD+ +Y ++I
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 475 GLYDKGRLEDALSYFHEMRLKG 496
L KG+L++AL+ +M L G
Sbjct: 444 SLCSKGKLDEALNMLKQMELSG 465
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 164/397 (41%), Gaps = 82/397 (20%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
+EG Y P +N+++ L + E ++ D+M P+ V TY L++
Sbjct: 323 QEG-YDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTV---TYNTLISTLCKE 378
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKNEFGY 255
+ VEEA + G L D+ F +L+ LC ++ VA FE E +EF Y
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 256 D------------------------------IKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
+ + T N +++G+C + EA+ + ++
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEV 498
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+SVTY T ++ L K ++ A +L M +G+KPD T N ++ C I +
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKK 558
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A ++++ M + GC P++ TY +LI LCK R+E + L ++ K
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK-------------- 604
Query: 406 LKSLKKPEEVPWVLERMERNGCKMSTDTYN-VILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
G ++ YN VI L+ + + E +E+ P
Sbjct: 605 --------------------GIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAP 644
Query: 465 DQRSYTVMIHGLYD-KGRLEDALSYFHEMRLKGMVPE 500
D SY ++ GL + G + +A+ + E+ KG VPE
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
>gi|326513966|dbj|BAJ92133.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 185/407 (45%), Gaps = 22/407 (5%)
Query: 106 KGEIEKALNQCEL-TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILD 164
+ + +AL+ L L+ +++ +V++R A W P N ++
Sbjct: 86 RAALHRALSSTGLDALSPEVLSDVVSRGNLSGSATVDLLDWAICSAKLRPSVQTCNIVVR 145
Query: 165 VLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
LGR + F + + M PDL T I+++ AA V +A+ + + +FG
Sbjct: 146 ALGRRKFFTSVEPALEVMRKNGVFPDLT---TLQIIMDTLVAARQVNKAVQMLES-DQFG 201
Query: 219 -----ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGN 272
AF L+ LCR HV VA + ++ + + F D + N +L GW G
Sbjct: 202 IGIEKTCHRKEAFSALIECLCRRSHVGVASSLVQAARGQPFHLDKQVYNDVLGGWARFGR 261
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
V + + FW +++ PD V++ + AL + G+ ALR+F+ M ++G P + N
Sbjct: 262 VDKLQHFWAMMLEDGLVPDDVSHCHLIEALGRAGQAEEALRVFEKMVQEGYGPTTMAYNA 321
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
++ + +++ ++M + C PN TY +I+ L K +R+ + D+M +
Sbjct: 322 LVFNFISVGDLDRSIKYYKDMVDNNCPPNSDTYCKMIRALLKTRRVADALQMFDDMLAQG 381
Query: 393 GSCLPNE---ITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
LP+ +F L + P + ++ + GC +S TY ++L+ +
Sbjct: 382 --VLPDTGIITSFIEPLCTFGPPHAALMIYQKSRKAGCTISLKTYKLLLERLARFGKSGT 439
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
V + WEEM++ G D+ Y +++GL + G+++ A+ E KG
Sbjct: 440 VLNIWEEMQESGYPSDKEIYEFIVNGLCNVGKVDAAVFVVEESLRKG 486
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 89/181 (49%), Gaps = 7/181 (3%)
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+ +I+ LC + + A +++ + + + YN ++ + R++ + + M +
Sbjct: 215 SALIECLCRRSHVGVASSLVQAARGQPFHLDKQVYNDVLGGWARFGRVDKLQHFWAMMLE 274
Query: 391 KNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+P++++ +L+++L + EE V E+M + G +T YN ++ +++
Sbjct: 275 DG--LVPDDVSHCHLIEALGRAGQAEEALRVFEKMVQEGYGPTTMAYNALVFNFISVGDL 332
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
D+ +++M P+ +Y MI L R+ DAL F +M +G++P+ TGI+
Sbjct: 333 DRSIKYYKDMVDNNCPPNSDTYCKMIRALLKTRRVADALQMFDDMLAQGVLPD--TGIIT 390
Query: 508 N 508
+
Sbjct: 391 S 391
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 16/247 (6%)
Query: 162 ILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRR-KEFGEL 220
+++ LGRA + E ++VF++M ++ YG Y A ++G DR K + ++
Sbjct: 287 LIEALGRAGQAEEALRVFEKM----VQEGYGPTTMAYNALVFNFISVGDLDRSIKYYKDM 342
Query: 221 DDLSAFQN------LLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNV 273
D + N ++ L + + V A F+ + D + + C G
Sbjct: 343 VDNNCPPNSDTYCKMIRALLKTRRVADALQMFDDMLAQGVLPDTGIITSFIEPLCTFGPP 402
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+ A ++ K+ C TY + L + GK GT L +++ M E G D I
Sbjct: 403 HAALMIYQKSRKAGCTISLKTYKLLLERLARFGKSGTVLNIWEEMQESGYPSDKEIYEFI 462
Query: 334 IDALCFKKRIPEALEVLREMKNRG-CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
++ LC ++ A+ V+ E +G CL V Y+ L L ++ ++ET Y ++ K+
Sbjct: 463 VNGLCNVGKVDAAVFVVEESLRKGFCLGRV-VYSKLNDRLLEMDKVETAYNLSKKI--KH 519
Query: 393 GSCLPNE 399
G L N
Sbjct: 520 GRTLANS 526
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 91/233 (39%), Gaps = 5/233 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
E A F+ + +EG Y P + +NA++ I+ + +M D N TY
Sbjct: 298 EEALRVFEKMVQEG-YGPTTMAYNALVFNFISVGDLDRSIKYYKDMVDNNCPPNSDTYCK 356
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNE 252
++ V +A+ +FD G L D + + LC + A ++ S K
Sbjct: 357 MIRALLKTRRVADALQMFDDMLAQGVLPDTGIITSFIEPLCTFGPPHAALMIYQKSRKAG 416
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+KT ++L G W+++ +S D Y VN L GK+ A+
Sbjct: 417 CTISLKTYKLLLERLARFGKSGTVLNIWEEMQESGYPSDKEIYEFIVNGLCNVGKVDAAV 476
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
+ + KG V + + D L ++ A + +++K+ L N Y
Sbjct: 477 FVVEESLRKGFCLGRVVYSKLNDRLLEMDKVETAYNLSKKIKHGRTLANSRNY 529
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 159/340 (46%), Gaps = 26/340 (7%)
Query: 163 LDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
L ++G ARR PD T L+ + +A+ EA RR D
Sbjct: 85 LRLVGSARR-----------PD---AGTCAALIKKLSASGRTAEA-----RRVLAACGPD 125
Query: 223 LSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ A+ ++ C ++ A E D T N ++ G C G A +
Sbjct: 126 VMAYNAMVAGYCGAGQLDAARRLVAEMPVE--PDAYTYNTLIRGLCGRGRTANALAVLDE 183
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+++ +C PD VTY + A K+ A++L M +KG PD+VT N +++ +C + R
Sbjct: 184 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 243
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ +A+E L+ + + GC PN +YN ++K LC +R E E + EM QK C PN +TF
Sbjct: 244 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG--CPPNVVTF 301
Query: 403 NYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
N L+ L + E VLE++ + GC ++ +YN +L + DK + M
Sbjct: 302 NMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 361
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+G PD SY ++ L G ++ A+ H+++ KG P
Sbjct: 362 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP 401
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 168/358 (46%), Gaps = 15/358 (4%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L ARR V EMP + TY L+ A+ V D + D+
Sbjct: 142 LDAARRLVA------EMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVT 195
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ LL C+ + A + +++ DI T N+++NG C G V +A F K++
Sbjct: 196 YTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 255
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
CEP++V+Y + L + A L M +KG P+VVT N +I LC K +
Sbjct: 256 SYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVE 315
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
ALEVL ++ GC PN +YN L+ CK K+M+ +LD M + C P+ +++N
Sbjct: 316 PALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG--CYPDIVSYNT 373
Query: 405 LLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
LL +L + EV +E +++ GC +YN ++ + EM KG
Sbjct: 374 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 433
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
+ PD +Y+ + GL + R+EDA+ F +++ G+ P +L N + + L +R E
Sbjct: 434 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT---VLYNAIILGLCKRRE 488
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 129/250 (51%), Gaps = 8/250 (3%)
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
G D+ N ++ G+C G + A+R ++ EPD+ TY T + L +G+ AL
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALA 179
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+ M + PDVVT +++A C + +A+++L EM+++GC P++ TYN ++ +C
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 239
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMS 430
+ R++ E+L + C PN +++N +LK L ++ E+ ++ M + GC +
Sbjct: 240 QEGRVDDAIEFLKNLPSYG--CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 297
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
T+N+++ + E++ K G P+ SY ++H + +++ A+++
Sbjct: 298 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 357
Query: 491 EMRLKGMVPE 500
M +G P+
Sbjct: 358 LMVSRGCYPD 367
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 182/376 (48%), Gaps = 29/376 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +L+ + + + +++ DEM PD+V TY +++N V++A
Sbjct: 191 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIV---TYNVVVNGICQEGRVDDA 247
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNG 266
I +G + ++ +L LC + E AE E + ++ T N++++
Sbjct: 248 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 307
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G V A + I K C P+S++Y ++A K+ K+ A+ M +G PD
Sbjct: 308 LCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPD 367
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+V+ N ++ ALC + A+E+L ++K++GC P + +YN++I L K + + E L+
Sbjct: 368 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN 427
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN-VILKLYV 442
EM K P+ IT++ + L + E+ +++ G + +T YN +IL L
Sbjct: 428 EMVSKGLQ--PDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL-- 483
Query: 443 NWDCEDKVRHT----WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
C+ + H+ + M G P++ +YT++I GL +G +++A E+ +G+V
Sbjct: 484 ---CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540
Query: 499 PEPRTGILVNDMNIKL 514
+ L+N I+L
Sbjct: 541 RKS----LINKGAIRL 552
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
+ +L ++G+L ALRL + R+PD TC +I L R EA VL C
Sbjct: 72 LRSLVRRGELDEALRLVGS----ARRPDAGTCAALIKKLSASGRTAEARRVL-----AAC 122
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEV 415
P+V YN+++ C +++ + EM + P+ T+N L++ L +
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEMPVE-----PDAYTYNTLIRGLCGRGRTANA 177
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
VL+ M R C TY ++L+ + +EM KG PD +Y V+++G
Sbjct: 178 LAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 237
Query: 476 LYDKGRLEDALSYFHEMRLKGMVP 499
+ +GR++DA+ + + G P
Sbjct: 238 ICQEGRVDDAIEFLKNLPSYGCEP 261
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 173/380 (45%), Gaps = 19/380 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+ A T FK + + Y P + A++D LG+ RR E +F+E P +V T
Sbjct: 12 DKAITLFKQMVDKAIY-PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVV---T 67
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRK-EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
Y +++ +E A+ ++D FG + + L+ LCR V+ E
Sbjct: 68 YNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEM 127
Query: 250 KNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ T N ++N G EA + + + C P+ +T+ + L K+G++
Sbjct: 128 AGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEI 187
Query: 309 GTALRLFQAMW--EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
A R+ M+ E G PDV+T N ++D LC ++RI +A V + RGC PNV TY+
Sbjct: 188 EAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYS 247
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERME 423
+LI L K+ +M+ + L +M + C N +T++ ++ L K E+ VL +M
Sbjct: 248 TLIDGLSKMAKMDEALQLLAKMVELG--CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
GC TYN ++ + + EM + G P +YT + HGL GR +
Sbjct: 306 DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 365
Query: 484 DALSYFHEMRLKGMVPEPRT 503
+A+ M +G P T
Sbjct: 366 EAVEILDYMAARGCAPNAIT 385
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 179/410 (43%), Gaps = 49/410 (11%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
E A T + ++ + P ++ ++D L R + ++ +EM N TY
Sbjct: 82 ENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNT 141
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA----ETFFESE 249
L+N +EA + ++ G +L F ++ LC+ +E A + F E
Sbjct: 142 LVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIE 201
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
D+ T N +L+G C + +A +K ++ C P+ VTY+T ++ L+K K+
Sbjct: 202 SG-LSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMD 260
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL+L M E G + + VT + ++D L R+ +A+ VLR+M++ GCLP+ TYN+LI
Sbjct: 261 EALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLI 320
Query: 370 KH-----------------------------------LCKIKRMETVYEYLDEMEQKNGS 394
LC+ R + E LD M +
Sbjct: 321 DGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG-- 378
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE----DKV 450
C PN IT++ ++ L K V L E+ + + ++ C+ D+
Sbjct: 379 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEA 438
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
E M + G PD +++++I+GL D GR++ L F M +G VP+
Sbjct: 439 YEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPD 488
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 162/364 (44%), Gaps = 47/364 (12%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E SP FN++LD L + +R ++ VF P++V TY L++ +
Sbjct: 201 ESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVV---TYSTLIDGLSKMA 257
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI 262
++EA+ + + E G CR V T +
Sbjct: 258 KMDEALQLLAKMVELG---------------CRANTV-------------------TYST 283
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++G +G + +A + + + C PD+VTY T ++ K+ +L A+ L + M E G
Sbjct: 284 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 343
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P VVT + LC R EA+E+L M RGC PN TY+S++ LCK R+
Sbjct: 344 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 403
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
Y ++M ++ P+ I ++ L+ L K +E LERM R G T+++++
Sbjct: 404 GYFEKM-ARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILIN 462
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ D + M ++G PD +Y ++ L R+++A F +MR G+ P
Sbjct: 463 GLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSP 522
Query: 500 EPRT 503
+ T
Sbjct: 523 DRST 526
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 138/312 (44%), Gaps = 40/312 (12%)
Query: 232 WLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
LC+ + V+ A T F+ ++ Y D+ T +++G V EA +++ C P
Sbjct: 4 GLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHP 63
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMW-EKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
VTY T ++ L K G++ AL L+ M G +P VVT + +ID LC + + ++
Sbjct: 64 TVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKL 123
Query: 350 LREMKNRGCLPNVTTYNSL-----------------------------------IKHLCK 374
L EM RGC PN TYN+L IK LCK
Sbjct: 124 LEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCK 183
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMST 431
+E + +DEM P+ ITFN +L L K + + V +R GC+ +
Sbjct: 184 EGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNV 243
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TY+ ++ D+ +M + G + +Y+ ++ GL GR+EDA+ +
Sbjct: 244 VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 303
Query: 492 MRLKGMVPEPRT 503
MR G +P+ T
Sbjct: 304 MRDAGCLPDAVT 315
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 153/352 (43%), Gaps = 40/352 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A+ FK G P ++ ++D L + + E +Q+ +M +L N TY ++
Sbjct: 227 AHNVFKRALERG-CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVV 285
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL-LWLCRYKHVEVAETFFESEKNEFG 254
+ +E+A+ V + ++ G L D + L+ + R + E E + F
Sbjct: 286 DGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFH 345
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
+ T + +G C G EA + C P+++TY++ V+ L K G++ AL
Sbjct: 346 PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY 405
Query: 315 FQAMW-EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
F+ M ++ P V+ + +ID LC +I EA E L M G +P+V T++ LI LC
Sbjct: 406 FEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLC 465
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDT 433
R++T E M ++ C+P+ +T+ L+ L + V
Sbjct: 466 DAGRIDTGLELFRGMAERG--CVPDMVTYATLVDRLCRASRV------------------ 505
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
D+ +++M G+ PD+ + MIHGL + R EDA
Sbjct: 506 --------------DEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 138/279 (49%), Gaps = 8/279 (2%)
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++G C V +A +K ++ PD VTY ++ L K+ ++ A LF+ KG
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMK-NRGCLPNVTTYNSLIKHLCKIKRMETV 381
P VVT N +ID LC RI AL + +M + G P V TY++LI LC+ ++
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
+ L+EM + C PN +T+N L+ +L + +E +LE+M NGC T+ +I+
Sbjct: 121 CKLLEEMAGRG--CAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLII 178
Query: 439 K-LYVNWDCEDKVRHTWEE-MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
K L + E R E M + G+ PD ++ ++ GL + R+ DA + F +G
Sbjct: 179 KGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 238
Query: 497 MVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
P T + D K+ + E + + K+ LG + N
Sbjct: 239 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRAN 277
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 120/248 (48%), Gaps = 11/248 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R+ P + +N ++D + +R E + + EM P +V TY L + +
Sbjct: 305 RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV---TYTTLCHGLCRS 361
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE--FGYDIKT 259
+EA+ + D G + + +++ LC+ V A +FE + +
Sbjct: 362 GRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIA 421
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
+ +++G C G + EA F + +I++ PD VT++ +N L G++ T L LF+ M
Sbjct: 422 YSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMA 481
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
E+G PD+VT ++D LC R+ EA ++ ++M++ G P+ +T ++I L ++ R E
Sbjct: 482 ERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDE 541
Query: 380 TVYEYLDE 387
DE
Sbjct: 542 DAKRIQDE 549
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 148/319 (46%), Gaps = 53/319 (16%)
Query: 236 YKHVEVAETFFESEKNEFGY-------------DIKTMNIILNGWCVLGNVYEAKRFWKD 282
Y V +F + +FG+ D T ++ G CV G + EA +
Sbjct: 110 YTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDK 169
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
++ +P+ VTY T ++ L K G A+RL ++M +K +P+V+T N IID L ++
Sbjct: 170 MVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQ 229
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ EAL + EM +G PNV+TYNS+I LCK + V ++EM + +PN + F
Sbjct: 230 VNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEM--VDSKIMPNVVIF 287
Query: 403 NYLLKSLKK--------------------PEEVPW------------------VLERMER 424
L+ +L K P+ V + V + M R
Sbjct: 288 TTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVR 347
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
GC + +Y+ ++ Y DK + +EEM ++ + P+ +Y +IHGL GRL D
Sbjct: 348 KGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRD 407
Query: 485 ALSYFHEMRLKGMVPEPRT 503
A++ FHEM G +P+ T
Sbjct: 408 AIALFHEMVASGQIPDLVT 426
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 176/396 (44%), Gaps = 21/396 (5%)
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------ 182
+NR F + FK + P + F ++ L + E + +FD+M
Sbjct: 122 LNRVDFGFSVLAKIFKL-----GHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQ 176
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EV 241
P N TYG L++ AI + + ++ + ++ L + + V E
Sbjct: 177 P---NGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEA 233
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
F E ++ T N I++G C +++ SK P+ V + T V+A
Sbjct: 234 LNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDA 293
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K+G + A + M ++G +PDVVT ++D C + + EA +V M +GC PN
Sbjct: 294 LCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPN 353
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V +Y++LI CKI+R++ +EM Q+ +PN +T+N L+ L + + +
Sbjct: 354 VISYSTLINGYCKIQRIDKAMYLFEEMCQR--ELVPNIVTYNTLIHGLCHVGRLRDAIAL 411
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
M +G TY ++L D+ + +E + PD +SY ++I G+
Sbjct: 412 FHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCR 471
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIK 513
G LE A F + KG+ P+ T I++N + ++
Sbjct: 472 VGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQ 507
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 175/379 (46%), Gaps = 11/379 (2%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
+T + I++ + + R EA F + +++ SP + +N+I+ L + + + +
Sbjct: 215 ITYNTIIDCLFKDRQVNEALNIFSEMIAK--GISPNVSTYNSIIHGLCKFSEWKHVATLM 272
Query: 180 DEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
+EM D + N + L++ MV A V D + G D+ + L+ C
Sbjct: 273 NEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLR 332
Query: 237 KHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
++ A+ F++ + ++ + + ++NG+C + + +A ++++ + + P+ VTY
Sbjct: 333 SEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTY 392
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
T ++ L G+L A+ LF M G+ PD+VT ++D LC + + +A+ +L+ ++
Sbjct: 393 NTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEG 452
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKP 412
P++ +YN +I +C++ +E + + K P+ T+ ++ L
Sbjct: 453 SNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLH--PDVWTYTIMINGLCLQGLL 510
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
E + M +GC TYN+I + ++ + +EM +G D + T++
Sbjct: 511 AEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLI 570
Query: 473 IHGLYDKGRLEDALSYFHE 491
+ L D G + HE
Sbjct: 571 VEMLSDDGLDQSVKQILHE 589
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 126/265 (47%), Gaps = 11/265 (4%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV 186
R + + A F + R+G +P ++ +++ + +R + + +F+EM P++V
Sbjct: 332 RSEMDEADKVFDTMVRKG-CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIV 390
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
TY L++ + +AI +F G++ DL ++ LL +LC+ +H++ A
Sbjct: 391 ---TYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAML 447
Query: 247 ES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
++ E + DI++ NI+++G C +G + A + + PD TY +N L +
Sbjct: 448 KAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQ 507
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G L A +LF+ M G PD T N I A+++L+EM RG + +T
Sbjct: 508 GLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTI 567
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQ 390
+++ L ++V + L E Q
Sbjct: 568 TLIVEMLSDDGLDQSVKQILHEFVQ 592
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 166/342 (48%), Gaps = 7/342 (2%)
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
GR V L+ + + +E YG ++N +AI +F + K+ +L +
Sbjct: 154 GRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMY 213
Query: 227 QNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD-II 284
++ LC+ V E E +N D+ + N +++G+C +G A + + ++
Sbjct: 214 NTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVV 273
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+ K PD T+ ++ L K G++ A + M ++G KPD+V+ N +++ C +
Sbjct: 274 RGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVG 333
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA +V +M R LPNV +Y +LI CK++ ++ L EM KN +P+ +T+N
Sbjct: 334 EAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKN--LVPDTVTYNC 391
Query: 405 LLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
LL L K + ++E M +G TYNV+L Y + DK ++ + + G
Sbjct: 392 LLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIG 451
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ P+ R+Y +++ GL GRL+ A F + KG P RT
Sbjct: 452 ISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRT 493
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 171/353 (48%), Gaps = 18/353 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+ I++ L + + + IQ+F +M P+L+ Y +++ +V+EA G+
Sbjct: 178 YGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLI---MYNTVIDGLCKQGLVDEACGLCT 234
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE--KNEFGYDIKTMNIILNGWCVL 270
E G D+ ++ +++ C + A + + + D+ T NI+++G C L
Sbjct: 235 EMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKL 294
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G V EA +IK +PD V+Y +N G +G A ++F M E+ P+V++
Sbjct: 295 GRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISY 354
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+I+ C + + EA+ +L EM N+ +P+ TYN L+ L K R ++YE+ D +E
Sbjct: 355 CTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR--SLYEW-DLVEA 411
Query: 391 KNGSCLPNE-ITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDC 446
S P + IT+N LL K E+ L + + G + TYN++L
Sbjct: 412 MRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGR 471
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ ++ + KG P+ R+Y +MIHGL +G L++A + ++M +P
Sbjct: 472 LKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLP 524
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 6/258 (2%)
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K F D++ + ++ G C+ G V EA + + D V Y T +N L K GK
Sbjct: 133 KMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTR 192
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+++F M + P+++ N +ID LC + + EA + EM G +V +YNS+I
Sbjct: 193 DAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMI 252
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNG 426
C + R + + LDEM + G P+ TFN L+ L K E V+ M + G
Sbjct: 253 HGFCSVGRFQAAVKLLDEMVVR-GKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED-A 485
K +YN ++ Y + + +++M ++ P+ SY +I+G Y K R+ D A
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLING-YCKVRMVDEA 370
Query: 486 LSYFHEMRLKGMVPEPRT 503
+ EM K +VP+ T
Sbjct: 371 MVLLTEMHNKNLVPDTVT 388
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 137/290 (47%), Gaps = 30/290 (10%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
++AA + G P FN ++D L + R E V M PD+V
Sbjct: 261 FQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIV--- 317
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
+Y L+N Y + V EA VFD+ E L ++ ++ L+ C+ + V+ A
Sbjct: 318 SYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEM 377
Query: 250 KNE-FGYDIKTMNIILNGWCVLG-NVYEAKRFWK--DIIKSKCEP-DSVTYATFVNALTK 304
N+ D T N +L+G G ++YE W + +++ +P D +TY ++ K
Sbjct: 378 HNKNLVPDTVTYNCLLDGLSKSGRSLYE----WDLVEAMRASGQPADLITYNVLLDDYFK 433
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
K AL LFQ + E G P++ T N ++D LC R+ A E+ + + +GC PN+ T
Sbjct: 434 HEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRT 493
Query: 365 YNSLIKHLCKIKRMETVYEYLDEME-----QKNGSCLPNEITFNYLLKSL 409
YN +I LCK +LDE E N + LPN ITF+ +++++
Sbjct: 494 YNIMIHGLCK-------EGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 109/233 (46%), Gaps = 8/233 (3%)
Query: 274 YEAKRFWKDIIKSK--CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
Y A I++SK +P +T++ +NA + G++G A L + + G + DV
Sbjct: 85 YNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILT 144
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
++ LC K R+ EA+ +L E +RG + Y ++I LCKI + + +M K
Sbjct: 145 TLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKM--K 202
Query: 392 NGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
PN I +N ++ L K +E + M NG ++ +YN ++ + +
Sbjct: 203 KIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQ 262
Query: 449 KVRHTWEEMEKKG-MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+EM +G + PD ++ ++I GL GR+ +A + M +G P+
Sbjct: 263 AAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPD 315
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 40/241 (16%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
AY + + G + P +NA+++ + E QVFD+M + L N +Y L+
Sbjct: 300 AYNVVAVMIKRG-WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLI 358
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR-------YKHVE-------- 240
N Y MV+EA+ + + D + LL L + + VE
Sbjct: 359 NGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQP 418
Query: 241 --------VAETFFESEKN-----------EFGY--DIKTMNIILNGWCVLGNVYEAKRF 279
+ + +F+ EK E G +I+T NI+L+G C G + AK
Sbjct: 419 ADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEI 478
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
++ + C+P+ TY ++ L K+G L A L M P+ +T + I+ A+
Sbjct: 479 FQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAILV 538
Query: 340 K 340
K
Sbjct: 539 K 539
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 175/363 (48%), Gaps = 17/363 (4%)
Query: 152 YSPGSNV-FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
+ P S V FN +L + + +++ + + ++M PD+ T IL+N + + +
Sbjct: 64 HPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVY---TLNILINSFCHLNRL 120
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNII 263
A V + + G D + F L+ LC + A F+ E F ++ T +
Sbjct: 121 GFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTL 180
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+NG C +GN A R + + + C+PD V Y + +++L K ++ A LF M +G
Sbjct: 181 INGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGI 240
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD+ T +I +LC +L +M N +P+V +++++ LCK ++ ++
Sbjct: 241 SPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHD 300
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
+D M + PN +T+N L+ + +E V + M NG + +YN ++
Sbjct: 301 VVDMMIIRGVE--PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLING 358
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
Y DK + +EEM +K + P+ +Y ++H + GRL+DA++ FHEM G +P+
Sbjct: 359 YCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCH-VGRLQDAIALFHEMVAHGQIPD 417
Query: 501 PRT 503
T
Sbjct: 418 LAT 420
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 183/392 (46%), Gaps = 20/392 (5%)
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------ 182
+NR F A++ + + G + P + F ++ L + + + +FD+M
Sbjct: 117 LNRLGF----AFSVLAKILKLG-HQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 171
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
P++V TYG L+N AI + ++ D+ + +++ LC+ + V A
Sbjct: 172 PNVV---TYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 228
Query: 243 ETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
F + DI T +++ C L +I SK PD V ++T V+A
Sbjct: 229 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 288
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K+GK+ A + M +G +P+VVT N ++D C + + EA++V M + G PN
Sbjct: 289 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 348
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS--LKKPEEVPWVL 419
V +YN+LI CKI+RM+ +EM QK +PN +T+N L+ + + ++ +
Sbjct: 349 VISYNTLINGYCKIQRMDKATYLFEEMCQK--ELIPNTVTYNTLMHXCHVGRLQDAIALF 406
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
M +G TY ++L D+ + +E M PD + YT++I G+
Sbjct: 407 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 466
Query: 480 GRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
G LE A F + KG+ P RT I++N +
Sbjct: 467 GELEAARDIFSNLSSKGLRPNVRTYTIMINGL 498
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 126/260 (48%), Gaps = 6/260 (2%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
+ + A F + G Y+P +N +++ + +R + +F+EM + N TY
Sbjct: 329 EMDEAVKVFDTMVHNG-YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTY 387
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EK 250
L++ + ++AI +F G++ DL+ ++ LL +LC+ H++ A ++ E
Sbjct: 388 NTLMHXCHVGRL-QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEG 446
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ DI+ I+++G C G + A+ + ++ P+ TY +N L ++G L
Sbjct: 447 SNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDE 506
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A +LF M G PD T N I L K A+++L+EM RG +V+T L++
Sbjct: 507 ANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 566
Query: 371 HLCKIKRMETVYEYLDEMEQ 390
LC K ++V + L E Q
Sbjct: 567 MLCDDKLDQSVKQILSEFVQ 586
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 160/377 (42%), Gaps = 26/377 (6%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
+G+ P V+ +I+D L + R+ E +F +M PD+ TY L++
Sbjct: 202 QGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIF---TYTSLIHSLCNLC 258
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE------SEKNEFGYD 256
+ + ++ + D+ F ++ LC+ + A + E N
Sbjct: 259 EWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPN----- 313
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ T N +++G C+ + EA + + ++ + P+ ++Y T +N K ++ A LF+
Sbjct: 314 VVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFE 373
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M +K P+ VT N ++ C R+ +A+ + EM G +P++ TY L+ +LCK
Sbjct: 374 EMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKS 432
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDT 433
++ L +E N P+ + ++ + + E+ + + G + + T
Sbjct: 433 HLDEAMALLKTIEGSNMD--PDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRT 490
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y +++ D+ + EM+ G PD +Y + GL A+ EM
Sbjct: 491 YTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 550
Query: 494 LKGMVPEPRTGILVNDM 510
+G + T L+ +M
Sbjct: 551 ARGFSADVSTTTLLVEM 567
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 162/325 (49%), Gaps = 9/325 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V T+ +L++ A V+ AI + D G + + ++L LC+++ + A
Sbjct: 190 PDVV---THNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKA 246
Query: 243 ETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ F + ++ D+++ NI++ G+C +G V EA +F+K++ PD V+++ +
Sbjct: 247 KEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGL 306
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+++G++ A + M G PD V +I C + EAL V EM GCLP+
Sbjct: 307 FSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPD 366
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWV 418
V TYN+L+ LCK R+ + L+EME++ P+ TF L+ + E +
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEKLLNEMEER--GVTPDLCTFTTLIHGYCRQGNFENALQL 424
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+ + R + TYN ++ K W++M + + P+ +Y+++I +
Sbjct: 425 FDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCE 484
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRT 503
KG++EDA + EM KG +P RT
Sbjct: 485 KGQVEDAFGFLDEMVKKGNLPNIRT 509
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 157/323 (48%), Gaps = 9/323 (2%)
Query: 182 MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+PD V Y +++ + A + EA+ V D FG L D+ + LL LC+ +
Sbjct: 329 VPDGV---IYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLD 385
Query: 242 AETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
AE E E+ D+ T +++G+C GN A + + +++ + PD VTY + ++
Sbjct: 386 AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLID 445
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
+ +KG L A L+ M + P+ +T + +ID+ C K ++ +A L EM +G LP
Sbjct: 446 GMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLP 505
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW--- 417
N+ TYNS+IK C+ ++ ++L +M Q N P+ ITFN L+ K E +
Sbjct: 506 NIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDN--VFPDLITFNTLIHGYIKEENMHGAFN 563
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
V ME+ + TYN+I+ + ++ M G+ PD+ +Y +I+G
Sbjct: 564 VFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHV 623
Query: 478 DKGRLEDALSYFHEMRLKGMVPE 500
G + A EM +G P+
Sbjct: 624 TAGNSKQAFQLHDEMIHRGFAPD 646
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 193/423 (45%), Gaps = 56/423 (13%)
Query: 127 NVINRYRF---DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM- 182
NV+ RF D +AA ++ G PG +N++L L + RRF + +VF M
Sbjct: 196 NVLIDARFRAGDVDAAIALVDSMANRG-LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMD 254
Query: 183 -----PDLVNEKTYGILLNRYAAAHMVEEA----------------------IGVFDRRK 215
PD+ +++ IL+ + V+EA IG+F RR
Sbjct: 255 QCSVAPDV---RSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRG 311
Query: 216 E-------------FGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKTM 260
E G + D + ++ CR + A E FG D+ T
Sbjct: 312 EMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV-RDEMVGFGCLPDVVTY 370
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N +LNG C + +A++ ++ + PD T+ T ++ ++G AL+LF +
Sbjct: 371 NTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLR 430
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+ +PDVVT N +ID +C K + +A E+ +M R LPN TY+ LI C+ ++E
Sbjct: 431 QRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVED 490
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVI 437
+ +LDEM +K LPN T+N ++K + V L++M ++ T+N +
Sbjct: 491 AFGFLDEMVKKGN--LPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTL 548
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ Y+ + + + MEK+ + PD +Y ++I+G ++G ++DA F M G+
Sbjct: 549 IHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGI 608
Query: 498 VPE 500
P+
Sbjct: 609 EPD 611
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 157/360 (43%), Gaps = 19/360 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVF----DEMPDLVNEKTYGIL--LNRYAAAHMVEE 206
+P VF+ ++ ++R+ E + F D + + +L L+R H+ +E
Sbjct: 84 TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQE 143
Query: 207 AIGVFDRRKEFGELDDLSAFQ-NLLLW-LCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
A R +++A+ N+++ C+ + A+T E EK D+ T N++
Sbjct: 144 AY-----RLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVL 198
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ G+V A + +P VTY + + L K + A +F+ M +
Sbjct: 199 IDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSV 258
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PDV + N +I C + EA++ +EM++R P+V +++ LI + M+
Sbjct: 259 APDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGA 318
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
YL EM K +P+ + + ++ + E V + M GC TYN +L
Sbjct: 319 YLREM--KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNG 376
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
EME++G+ PD ++T +IHG +G E+AL F + + + P+
Sbjct: 377 LCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPD 436
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 131/251 (52%), Gaps = 5/251 (1%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
DI ++ G+C +G +A R + I S PD +TY ++ + G+ A +L
Sbjct: 118 DIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLL 177
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M +G P VVT N +I+ LC K + A++VL +M GC PN +YN L+ CK
Sbjct: 178 ADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKE 237
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTD 432
K+ME EYL +M + C P+ +T+N LL +L K +V +E ++ GC
Sbjct: 238 KKMERAIEYLGKMTSRG--CYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLI 295
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TYN ++ D+ +EM KG+ PD +Y+ ++ GL +G++++A+ +FH++
Sbjct: 296 TYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDL 355
Query: 493 RLKGMVPEPRT 503
+ G+ P T
Sbjct: 356 EVLGVKPNAIT 366
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 151/320 (47%), Gaps = 41/320 (12%)
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEA 276
G++ D+ +L+ C+ A E E + D+ T N++++G C G +A
Sbjct: 114 GDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDA 173
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
++ D+++ C P VT+ +N L +KG LG A+ + + M + G P+ ++ N ++
Sbjct: 174 EKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHG 233
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
C +K++ A+E L +M +RGC P++ TYN+L+ LCK +++ E L+++ K C
Sbjct: 234 FCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKG--CS 291
Query: 397 PNEITFNYLLKSLKK---PEEVPWVLERM------------------------------- 422
P IT+N ++ L K ++ +L+ M
Sbjct: 292 PVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKF 351
Query: 423 ----ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
E G K + TYN I+ D+ M ++G P + SYT++I GL
Sbjct: 352 FHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAY 411
Query: 479 KGRLEDALSYFHEMRLKGMV 498
+G ++AL +E+ L+G+V
Sbjct: 412 EGLAKEALELLNELCLRGVV 431
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 169/410 (41%), Gaps = 40/410 (9%)
Query: 1 MRSRFRQLKR--IYREHFQQKFKFHSQLTTQFSKLQSCNSVTSHKTLIPIINLQARNSEF 58
+R R R+LKR I+ F K + KL + + H +L PI +L N E
Sbjct: 34 VRVRVRKLKRSRIFAVSFNGKLQ-------SLDKLPNGHLGNGHVSLSPIHSLT--NFE- 83
Query: 59 LFLGRIETAQLVHSLANSDEKSEFQR------YPGD--EIAINVQNILKTCSVSTKGEIE 110
IE+ + L + E E R Y GD +I I C + G+
Sbjct: 84 ----EIESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKI---GKTR 136
Query: 111 KALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG--------DYSPGSNVFNAI 162
KA E+ + +VI Y + +W+ E SP FN +
Sbjct: 137 KATRIMEIIEDSGAVPDVIT-YNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNIL 195
Query: 163 LDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGE 219
++ L R I V ++MP N +Y LL+ + +E AI + G
Sbjct: 196 INFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGC 255
Query: 220 LDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKR 278
D+ + LL LC+ V+ A E + + T N +++G +G +A +
Sbjct: 256 YPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAK 315
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
++ +PD +TY++ V L+++GK+ A++ F + G KP+ +T N I+ LC
Sbjct: 316 LLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLC 375
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
++ A++ L M RGC P +Y LI+ L + E L+E+
Sbjct: 376 KARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 117/238 (49%), Gaps = 5/238 (2%)
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
++ L + G+L R ++M +G PD++ C +I C + +A ++ +++ G
Sbjct: 91 LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW- 417
+P+V TYN LI +C R + L +M ++ C P+ +TFN L+ L + +
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRG--CSPSVVTFNILINFLCRKGLLGRA 208
Query: 418 --VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
VLE+M ++GC ++ +YN +L + ++ +M +G PD +Y ++
Sbjct: 209 IDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTA 268
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLK 533
L G+++ A+ +++ KG P T V D K+ + + K + ++ + GLK
Sbjct: 269 LCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLK 326
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 200/443 (45%), Gaps = 50/443 (11%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
++A + + +++ G P S ++ ++ L R E +Q+ ++M PD+ +T
Sbjct: 222 DSACSLLRDMAKHG-CVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDV---QT 277
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE---------- 240
+ +++ A + EA + DR G D + L+ LCR V+
Sbjct: 278 FNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP 337
Query: 241 --------------VAETFFESEKNEF-------GY--DIKTMNIILNGWCVLGNVYEAK 277
VA FE K+ GY D T NI+++G G + A
Sbjct: 338 NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSAL 397
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+++ + EP+ +TY +N K+G+L A + +M KG + V NC+I AL
Sbjct: 398 ELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICAL 457
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C I EAL++ EM +GC P++ T+NSLI LCK +ME +M + +
Sbjct: 458 CKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLE--GVIA 515
Query: 398 NEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N +T+N L+ + + + +++ M GC + TYN ++K +K +
Sbjct: 516 NTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLF 575
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIK 513
EEM KG+ P S ++I GL G++ DAL + +M +G+ P+ T L+N + K
Sbjct: 576 EEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGL-CK 634
Query: 514 LKERGEQGKKVIKLTSLGLKGNA 536
+ E KL S G++ +A
Sbjct: 635 MGHVQEASNLFNKLQSEGIRPDA 657
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 169/400 (42%), Gaps = 51/400 (12%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
L + LI + RF+ EA + + G Y P + FN ++D L + V +++
Sbjct: 342 VLYNTLISGYVASGRFE-EAKDLLYNNMVIAG-YEPDAYTFNIMIDGLVKKGYLVSALEL 399
Query: 179 FDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
+EM P+++ TY IL+N + +EEA + + G LS
Sbjct: 400 LNEMVAKRFEPNVI---TYTILINGFCKQGRLEEAAEIVNSMSAKG----LSL------- 445
Query: 233 LCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
N GY N ++ C GN+ EA + + ++ C+PD
Sbjct: 446 ------------------NTVGY-----NCLICALCKDGNIEEALQLFGEMSGKGCKPDI 482
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
T+ + +N L K K+ AL L+ M+ +G + VT N ++ A + I +A +++ E
Sbjct: 483 YTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDE 542
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--- 409
M RGC + TYN LIK LCK +E +EM K P I+ N L+ L
Sbjct: 543 MLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGK--GIFPTIISCNILISGLCRT 600
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
K + L+ M G TYN ++ + + + +++ +G+ PD +Y
Sbjct: 601 GKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITY 660
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
+I +G DA ++ G +P T IL+N
Sbjct: 661 NTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 162/379 (42%), Gaps = 27/379 (7%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKT 190
D + F+ + YS + ++D LG F + ++ +M D L E
Sbjct: 77 LDIPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESL 136
Query: 191 YGILLNRYAAAHMVEEAI-------GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA- 242
+ +++ Y A + +A GV+ F ++ +L L VA
Sbjct: 137 FILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTF------KSYNVVLDILVDGDCPRVAP 190
Query: 243 ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
F++ + T +++ C++ V A +D+ K C P+SV Y T ++AL
Sbjct: 191 NVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHAL 250
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
+ ++ AL+L + M+ +PDV T N +I LC RI EA ++L M RG +
Sbjct: 251 CENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDA 310
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK----SLKKPEEVPWV 418
TY L+ LC++ +++ L+++ PN + +N L+ S + E +
Sbjct: 311 LTYGYLMHGLCRMGQVDEARALLNKIPN------PNTVLYNTLISGYVASGRFEEAKDLL 364
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
M G + T+N+++ V EM K P+ +YT++I+G
Sbjct: 365 YNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCK 424
Query: 479 KGRLEDALSYFHEMRLKGM 497
+GRLE+A + M KG+
Sbjct: 425 QGRLEEAAEIVNSMSAKGL 443
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 5/242 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGI 193
E A F +S +G P FN++++ L + + E + ++ +M + N TY
Sbjct: 464 EEALQLFGEMSGKG-CKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNT 522
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L++ + +++A + D G D + L+ LC+ VE FE +
Sbjct: 523 LVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKG 582
Query: 254 GYD-IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ I + NI+++G C G V +A +F +D+I PD VTY + +N L K G + A
Sbjct: 583 IFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEAS 642
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
LF + +G +PD +T N +I C + +A +L + + G +PN T++ LI ++
Sbjct: 643 NLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYI 702
Query: 373 CK 374
K
Sbjct: 703 VK 704
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY L+ VE+ +G+F+ G + + L+ LCR V A F +
Sbjct: 554 TYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDM 613
Query: 250 KNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ DI T N ++NG C +G+V EA + + PD++TY T ++ +G
Sbjct: 614 IHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMF 673
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
A L + G P+ VT + +I+ + K+IP
Sbjct: 674 NDACLLLYKGVDSGFIPNEVTWSILINYIV--KKIP 707
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 34/191 (17%)
Query: 310 TALRLFQ-AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
T++ LFQ A +KG C +ID L ++L++MK+ G L + + +
Sbjct: 81 TSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILI 140
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
+KH K + LP + T +L+ C
Sbjct: 141 MKHYGK-------------------AGLPGQAT--------------RLLLDMWGVYSCD 167
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+ +YNV+L + V+ DC + + +M +G+ P ++ V++ L ++ A S
Sbjct: 168 PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSL 227
Query: 489 FHEMRLKGMVP 499
+M G VP
Sbjct: 228 LRDMAKHGCVP 238
>gi|356561955|ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Glycine max]
Length = 622
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 211/459 (45%), Gaps = 29/459 (6%)
Query: 94 VQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS 153
+ N+ S+S + L++ + L++ V +R+ + ++ F W +
Sbjct: 96 ISNLFADPSLSPGPALHAELDRAGIEPDPALLLAVFDRFGSSPKLLHSLFLWAQTRPAFR 155
Query: 154 PGSNVFNAILDVLGRARRFVELIQVF-----------DEMPDLVNEKTYGILLNRYAAAH 202
PG +F+A+++ L +AR F ++ E LV+ T+ I++ RYA A
Sbjct: 156 PGPKLFDAVVNALAKAREFDAAWKLVLHHAEKDGEEEGEKERLVSVGTFAIMIRRYARAG 215
Query: 203 MVEEAIGVFDRRKEFGELDD----LSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGY-- 255
M + AI ++ + D +S + L+ LC+ V E +E F ++ + +
Sbjct: 216 MSKLAIRTYEFATNNKSIVDSGSEMSLLEILMDSLCKEGSVREASEYFLWKKELDLSWVP 275
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
I+ NI+LNGW L + + +R W ++ K P VTY T V + ++ AL +
Sbjct: 276 SIRVYNIMLNGWFRLRKLKQGERLWAEM-KENMRPTVVTYGTLVEGYCRMRRVEKALEMV 334
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M ++G P+ + N IIDAL R EAL +L P +TYNSL+K CK
Sbjct: 335 GDMTKEGIAPNAIVYNPIIDALAEAGRFKEALGMLERFHVLEIGPTDSTYNSLVKGFCKA 394
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
+ + L M + LP+ T+NY + +K EE + ++ ++G
Sbjct: 395 GDLVGASKILKMMISRG--FLPSATTYNYFFRYFSRCRKIEEGMNLYTKLIQSGYTPDRL 452
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY++++K+ + D +EM G D + T+++H L RLE+A F +M
Sbjct: 453 TYHLLVKMLCEEEKLDLAVQVSKEMRHNGYDMDLATSTMLVHLLCKVRRLEEAFVEFEDM 512
Query: 493 RLKGMVPEPRTGILVNDMNIKLKERG--EQGKKVIKLTS 529
+G+VP+ T M LK++G E +K+ KL S
Sbjct: 513 IRRGIVPQYLT---FQRMKADLKKQGMTEMAQKLCKLMS 548
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 158/325 (48%), Gaps = 15/325 (4%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEV 241
PD+ T IL++ ++ V+ A VF + + G D F L+ LC+ K +
Sbjct: 128 PDIY---TLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQA 184
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
E F + E + + T I+NG C +G A +K + ++ C+P+ VTY +++
Sbjct: 185 VEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDS 244
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K + AL +F M K PD+ T N +I LC +R EA +L EM + +PN
Sbjct: 245 LCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPN 304
Query: 362 VTTYNSLIKHLC---KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW- 417
+ T+N L+ +C K+ + V++ + EM + P+ +T++ L+ E+
Sbjct: 305 IFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVE-----PDVVTYSSLMYGYSLRMEIVEA 359
Query: 418 --VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
+ + M GCK +YN+++K Y D+ + + EM +G+ PD +Y +IHG
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPE 500
L GRL +A F M G +P+
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPD 444
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 172/370 (46%), Gaps = 10/370 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGI 193
+ A++ F + + G P + FN +++ L + +F + ++ FD+ + T Y
Sbjct: 147 DLAFSVFSKMIKLG-LQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTT 205
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNE 252
++N A G+F + +E G ++ + L+ LC+ K V E + F +
Sbjct: 206 IINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKR 265
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
DI T N ++ G C EA ++ P+ T+ V+A+ K+GK+ A
Sbjct: 266 ISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQ 325
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+F+ M E G +PDVVT + ++ + I EA ++ M +GC P+ +YN LIK
Sbjct: 326 GVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGY 385
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
CK KR++ + +EM + + P+ + +N L+ L + E + + M NG
Sbjct: 386 CKAKRIDEAKQLFNEMIHQGLT--PDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLP 443
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TY+++L + K + M+ + PD Y ++I + G L+DA F
Sbjct: 444 DLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLF 503
Query: 490 HEMRLKGMVP 499
E+ ++G++P
Sbjct: 504 SELFVQGLLP 513
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 153/318 (48%), Gaps = 6/318 (1%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N TY IL++ +V EA+ +F K D+ + +L+ LC ++ + A
Sbjct: 234 NVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALL 293
Query: 247 -ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E +I T N++++ C G V EA+ +K + + EPD VTY++ + + +
Sbjct: 294 NEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLR 353
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
++ A +LF AM KG KPD + N +I C KRI EA ++ EM ++G P+ Y
Sbjct: 354 MEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNY 413
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERM 422
N+LI LC++ R+ + M NG+ LP+ T++ LL K + + M
Sbjct: 414 NTLIHGLCQLGRLREAQDLFKNM-HSNGN-LPDLFTYSMLLDGFCKEGYLGKAFRLFRVM 471
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+ K YN+++ + R + E+ +G+ P+ + YT +I+ L +G L
Sbjct: 472 QSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLL 531
Query: 483 EDALSYFHEMRLKGMVPE 500
++AL F M G P+
Sbjct: 532 DEALEAFRNMEGDGCPPD 549
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 127/263 (48%), Gaps = 12/263 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P FN ++D + + + E VF M PD+V TY L+ Y+ + EA
Sbjct: 303 PNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVV---TYSSLMYGYSLRMEIVEA 359
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNG 266
+FD G D ++ L+ C+ K ++ A+ F E D N +++G
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C LG + EA+ +K++ + PD TY+ ++ K+G LG A RLF+ M KPD
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+ N +IDA+C + +A ++ E+ +G LPNV Y ++I +LCK ++ E
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFR 539
Query: 387 EMEQKNGSCLPNEITFNYLLKSL 409
ME C P+E ++N +++
Sbjct: 540 NME--GDGCPPDEFSYNVIIRGF 560
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 127/287 (44%), Gaps = 15/287 (5%)
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK-RF 279
DD S+F+N+ L + H+ E I +L+ +G Y A
Sbjct: 67 DDASSFRNIDDALASFNHMLHREPL---------PCIIQFTKLLSAIVKMGQYYGAVISL 117
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K + + PD T + ++ + ++ A +F M + G +PD VT N +I+ LC
Sbjct: 118 SKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCK 177
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ +A+E + + GC P V TY ++I LCKI +ME+ C PN
Sbjct: 178 VGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEE--AGCQPNV 235
Query: 400 ITFNYLLKSLKKPEEVPWVLERMERNGCK-MSTD--TYNVILKLYVNWDCEDKVRHTWEE 456
+T+N L+ SL K + V L+ K +S D TYN +++ N+ + E
Sbjct: 236 VTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNE 295
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
M + P+ ++ V++ + +G++ +A F M G+ P+ T
Sbjct: 296 MTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVT 342
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +N ++ +A+R E Q+F+EM PD VN Y L++ + EA
Sbjct: 373 PDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVN---YNTLIHGLCQLGRLREA 429
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF-GYDIKTMNIILNG 266
+F G L DL + LL C+ ++ A F ++ + DI NI+++
Sbjct: 430 QDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDA 489
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C GN+ +A++ + ++ P+ Y T +N L K+G L AL F+ M G PD
Sbjct: 490 MCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPD 549
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
+ N II K A +++ EM++RG + T
Sbjct: 550 EFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 4/144 (2%)
Query: 396 LPNEITFNYLLKSLKKPEE----VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
LP I F LL ++ K + V + ++ME G T ++++ + + D
Sbjct: 91 LPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAF 150
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
+ +M K G+ PD ++ +I+GL G+ A+ +F + G P T + +
Sbjct: 151 SVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGL 210
Query: 512 IKLKERGEQGKKVIKLTSLGLKGN 535
K+ E K+ G + N
Sbjct: 211 CKIGETTAAAGLFKKMEEAGCQPN 234
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 179/360 (49%), Gaps = 17/360 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
Y P + FN ++ L + E + + D M PDLV TYG+++N +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLV---TYGVVVNGLCKRGDTD 238
Query: 206 EAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
A + ++ ++ G+L+ + + ++ LC+ KH++ A F E E ++ T + +
Sbjct: 239 LAFILLNKMEQ-GKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ C G +A R D+I+ K PD T++ ++A K+GKL A +L+ M ++
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P +VT + +I+ C R+ EA ++ M ++ C P+V +Y++LIK CK KR++ E
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGME 417
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKL 440
EM Q+ + N +T+ L++ L + + + + M +G + TYN +L
Sbjct: 418 LFREMSQRG--LVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+K +E +++ M P +Y +MI G+ G++ED F + LKG+ P+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 161/386 (41%), Gaps = 42/386 (10%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
F+ +L + + +F +I + ++M +L N TY IL+N + + A+ V +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G ++ +LL C K + A + + GY + T N +++G +
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVD-QMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA ++ C+PD VTY VN L K+G A L M + +P V+ I
Sbjct: 203 SEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTI 262
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM----- 388
ID LC K + +AL + +EM+ +G PNV TY+SLI LC R L +M
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 389 ----------------------------EQKNGSCLPNEITFNYLLKSL---KKPEEVPW 417
E S P+ +T++ L+ + +E
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ E M C +Y+ ++K + D+ + EM ++G+ + +YT +I GL+
Sbjct: 383 MFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLF 442
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRT 503
G + A F EM G+ P T
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMT 468
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 170/408 (41%), Gaps = 56/408 (13%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT 190
R F + +Y + + +SR G + A+ + ++R F +I+
Sbjct: 37 RRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIE------------- 83
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
+ LL+ A + + I + ++ + G + + L+ CR + +A +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVL-GKM 142
Query: 251 NEFGYD--IKTMNIILNGWC----------------VLG-------------------NV 273
+ GY+ I T++ +LNG+C V G
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA ++ C+PD VTY VN L K+G A L M + +P V+ I
Sbjct: 203 SEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTI 262
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
ID LC K + +AL + +EM+ +G PNV TY+SLI LC R L +M ++
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 394 SCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
+ P+ TF+ L+ + K E + + M + S TY+ ++ + D D+
Sbjct: 323 N--PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ +E M K PD SY+ +I G R+++ + F EM +G+V
Sbjct: 381 KQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 12/263 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + VE +++DEM P +V TY L+N + ++E
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV---TYSSLINGFCMHDRLDE 379
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILN 265
A +F+ D+ ++ L+ C+ K V E E F E + + T ++
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQ 439
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G+ A+ +K+++ P+ +TY T ++ L K GKL A+ +F+ + +P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ T N +I+ +C ++ + ++ + +G P+V YN++I C+ E
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 386 DEMEQKNGSCLPNEITFNYLLKS 408
EM K LPN +N L+++
Sbjct: 560 KEM--KEDGTLPNSGCYNTLIRA 580
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 12/259 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
EA + + V R D P ++++++ R E Q+F+ M PD+V +
Sbjct: 344 EAEKLYDEMVKRSID--PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV---S 398
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESE 249
Y L+ + A V+E + +F + G + + + L+ L + ++A E F E
Sbjct: 399 YSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV 458
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ +I T N +L+G C G + +A ++ + +SK EP TY + + K GK+
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
LF + KG KPDVV N +I C K EA + +EMK G LPN YN+LI
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 370 KHLCKIKRMETVYEYLDEM 388
+ + E E + EM
Sbjct: 579 RARLRDGDREASAELIKEM 597
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 4/165 (2%)
Query: 177 QVFDEM-PDLV--NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
++F EM D V N TY LL+ +E+A+ VF+ + + + ++ +
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Query: 234 CRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
C+ VE + F D+ N +++G+C G+ EA +K++ + P+S
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
Y T + A + G + L + M G D T + + L
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 181/355 (50%), Gaps = 13/355 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P + FN ++ L +A + I + ++MP+ +EKT+ L+ + VE A+ +
Sbjct: 197 PDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRI 256
Query: 211 FDRRKEFG-ELDDLSAFQNLLL-WLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
+ E G EL +S N+L+ LC+ +E A F E+ F D T N ++NG C
Sbjct: 257 KELMVESGCELTSVSV--NVLVNGLCKEGRIEEALRFIYEEEG-FCPDQVTFNALVNGLC 313
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G++ + +++ E D TY + ++ L K G++ A+ + M + +P+ V
Sbjct: 314 RTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTV 373
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N +I LC + + A E+ R + ++G LP+V T+NSLI+ LC E E +EM
Sbjct: 374 TYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM 433
Query: 389 EQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
++K C P+E T++ L++SL ++ +E +L+ ME +GC + YN ++ +
Sbjct: 434 KEKG--CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNN 491
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+++ME G+ +Y +I+GL R+E+A +M ++G+ P+
Sbjct: 492 RVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPD 546
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 177/408 (43%), Gaps = 44/408 (10%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVN 187
R + D +A + F+W S + +YS +VF+ +L L RA F ++ + +M V+
Sbjct: 67 RRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVD 126
Query: 188 EKTYGILLNRYAAAHMVEEAIG--VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
E T+ I L YA +H + I ++F D + L L + +++ ET
Sbjct: 127 ESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETL 186
Query: 246 FESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
+ D+ T NI++ C + A +D+ PD T+ T + +
Sbjct: 187 HSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIE 246
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE------------ 352
+ + ALR+ + M E G + V+ N +++ LC + RI EAL + E
Sbjct: 247 EADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFN 306
Query: 353 ---------------------MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
M +G +V TYNSLI LCK+ ++ E L M +
Sbjct: 307 ALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSR 366
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVPWVLER---MERNGCKMSTDTYNVILKLYVNWDCED 448
+ C PN +T+N L+ +L K V E + G T+N +++ +
Sbjct: 367 D--CEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNRE 424
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+EEM++KG PD+ +Y+++I L + RL++AL EM L G
Sbjct: 425 IAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSG 472
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 196/439 (44%), Gaps = 49/439 (11%)
Query: 116 CELT-LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE 174
CELT ++ +++VN + + EA +++ E + P FNA+++ L R +
Sbjct: 265 CELTSVSVNVLVNGLCKEGRIEEA----LRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQ 320
Query: 175 LIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
+++ D M + ++ TY L++ ++EA+ + + + L+
Sbjct: 321 GLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIG 380
Query: 232 WLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
LC+ HVE A ++ D+ T N ++ G C+ N A ++++ + C+P
Sbjct: 381 TLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDP 440
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D TY+ + +L + +L AL L + M G +VV N +ID LC R+ +A ++
Sbjct: 441 DEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIF 500
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK------------------- 391
+M+ G + TYN+LI LCK KR+E + +D+M +
Sbjct: 501 DQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQ 560
Query: 392 ---------------NGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDT 433
NG C P+ +T+ L+ L K V +L ++ G ++
Sbjct: 561 GDIKRAADIVQNMTLNG-CEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQA 619
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG-RLEDALSYFHEM 492
YN +++ + + EM +KG PD +Y ++ GL + G +++A+ + EM
Sbjct: 620 YNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEM 679
Query: 493 RLKGMVPE-PRTGILVNDM 510
KG++PE P G L +
Sbjct: 680 LEKGILPEFPSFGFLAEGL 698
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 159/363 (43%), Gaps = 21/363 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
EAA + ++ +G P FN+++ L +++F+EM PD E T
Sbjct: 389 EAATELARVLTSKG-VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPD---EFT 444
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-E 249
Y IL+ + ++EA+ + + G ++ + L+ LC+ V AE F+ E
Sbjct: 445 YSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQME 504
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
T N ++NG C V EA + +I +PD TY T + ++G +
Sbjct: 505 MLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIK 564
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A + Q M G +PD+VT +I LC R+ A ++LR ++ +G + YN +I
Sbjct: 565 RAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVI 624
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-----KKPEEVPWVLERMER 424
+ LCK KR + EM +K P+ IT+ + + L E V + +E +E+
Sbjct: 625 QALCKRKRTKEAMRLFREMMEKGDP--PDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEK 682
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G ++ + + + ED + + +KG +S T +I G + D
Sbjct: 683 -GILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRF--SQSETSIIRGFLKIQKFND 739
Query: 485 ALS 487
AL+
Sbjct: 740 ALA 742
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 174/386 (45%), Gaps = 51/386 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + A++ RA++ E +++ +EM P+LV TY +L++ MV A
Sbjct: 55 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLV---TYNVLVDALCKLSMVGAA 111
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCR-------------------------------- 235
V + E G ++ F +L+ C+
Sbjct: 112 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDG 171
Query: 236 ----YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
K +E E E + + D T + +++G C + EA++ + + S C PD
Sbjct: 172 LCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 231
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
V Y++ ++A K GKL A + Q M ++ + PDVVT N +ID LC +I EA +L
Sbjct: 232 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILD 291
Query: 352 EMKNRG-CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
+M+ G LP+V TY+++I LCK + + LD M + C P+ +T+ ++ L
Sbjct: 292 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK--AGCNPDVVTYTTIIDGLC 349
Query: 411 KP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
K EE ++L+ M+R GC + TY ++ D+ EEM G P+
Sbjct: 350 KCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLV 409
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMR 493
+Y M++GL GR+++A M+
Sbjct: 410 TYNTMVNGLCVSGRIKEAQQLVQRMK 435
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 144/315 (45%), Gaps = 49/315 (15%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++A++D L ++++F+E +V +EM PD TY L++ A +EEA
Sbjct: 160 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAF---TYSALIHGLCKADKIEEA 216
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNG 266
+ R G D+ + +++ C+ K +E +T E K D+ T N +++G
Sbjct: 217 EQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDG 276
Query: 267 WCVLGNV------------------------------------YEAKRFWKDIIKSKCEP 290
C LG + EA++ + K+ C P
Sbjct: 277 LCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP 336
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D VTY T ++ L K G+L A L Q M G P+VVT +I LC +++ EA V+
Sbjct: 337 DVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVM 396
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
EM+N GC PN+ TYN+++ LC R++ + + M+ C P+ T+ ++ +L
Sbjct: 397 EEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALM 456
Query: 411 KP---EEVPWVLERM 422
+E +LE+M
Sbjct: 457 SSDLVQEAEQLLEQM 471
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 148/330 (44%), Gaps = 40/330 (12%)
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNG 266
G D + G ++ + L+ R K +E A E E E G ++ T N++++
Sbjct: 43 GAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLE-EMRERGCPPNLVTYNVLVDA 101
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C L V A+ K +I+ P+ +T+ + V+ K+G + A +L M KG +P+
Sbjct: 102 LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPN 161
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT + +ID LC ++ EA EVL EMK G P+ TY++LI LCK ++E + L
Sbjct: 162 VVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLR 221
Query: 387 EMEQ------------------KNGSCL---------------PNEITFNYLLKS---LK 410
M K+G L P+ +T+N ++ L
Sbjct: 222 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 281
Query: 411 KPEEVPWVLERMERNGCKM-STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
K E +L++M+ +G + TY+ ++ D + + + M K G PD +Y
Sbjct: 282 KIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTY 341
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
T +I GL GRLE+A M+ G P
Sbjct: 342 TTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 371
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 9/290 (3%)
Query: 234 CRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
C + A E K+ F D T I+ G++ A + + C+P+
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
VTY + A + KL A++L + M E+G P++VT N ++DALC + A +V+++
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
M G PNV T+NSL+ CK ++ + L M K PN +T++ L+ L K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMR--PNVVTYSALIDGLCKS 175
Query: 413 E---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+ E VLE M+ +G TY+ ++ D ++ M G PD Y
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
+ +IH G+L +A EMR + P+ T V D KL + E
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAE 285
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 177/392 (45%), Gaps = 50/392 (12%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + + +++ L A F + ++F +M P V TY ++++ M+EE
Sbjct: 42 TPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPV---TYNVIIDASCKRGMLEE 98
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
A + + E G + D+ + ++ LC+ VE A F E E+ + ++ N I+
Sbjct: 99 ACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIIL 158
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C + +A + + ++ PDS +Y ++ L K GKL A +LF+ M + G P
Sbjct: 159 GLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITP 218
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGC--------------------------- 358
VT N +I +C + EALE+ + M+++GC
Sbjct: 219 SAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLL 278
Query: 359 --------LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
+P+V TY++LI LC I R++ L++M ++ C P +T N L+ L
Sbjct: 279 KRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ--CKPTVVTQNTLIHGLC 336
Query: 411 KP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
K +E VL+ M +G TYN ++ + ++ R +M +G+ P+
Sbjct: 337 KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 396
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+YT ++ GL RL +A F +M+ G P
Sbjct: 397 TYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 192/445 (43%), Gaps = 49/445 (11%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEK-TYGI 193
E A F + R G +P N I+ L + + + QVF EM D+ + +YGI
Sbjct: 132 EEALLLFNEMERLG-CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGI 190
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L++ A A + EA +F R + G + ++ +C ++ A F+S +++
Sbjct: 191 LIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250
Query: 254 GYDIK-TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ T NI+++ C G + EA R K + PD VTY+T ++ L ++ A
Sbjct: 251 CRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L + M ++ KP VVT N +I LC RI EA EVL M + G P+V TYN+L+
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGH 370
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKM 429
C+ + E E L +M + + PN +T+ L+ L K +P V +M+ +GC
Sbjct: 371 CRAGQTERARELLSDMVARGLA--PNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM----------------- 472
+ TY ++ + + D + EM G+ PD Y +
Sbjct: 429 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488
Query: 473 --------------------IHGLYDKGRLEDALSYFHEMRLKGMVPEP-RTGILVNDMN 511
+ GL D G++E AL + +M G +P P R LV +
Sbjct: 489 REGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL- 547
Query: 512 IKLKERGEQGKKVIKLTSLGLKGNA 536
K + GE + ++ L G A
Sbjct: 548 CKSGQGGEARAVLEEIMDLAYGGKA 572
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 174/410 (42%), Gaps = 51/410 (12%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
++ A F ++R G P +N I+D + E + +M PD+V
Sbjct: 61 FDDARELFADMNRRG-CPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVV--- 116
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
TY +++ + VEEA+ +F+ + G + + ++L LC+ ++ A + F E
Sbjct: 117 TYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 249 EKNEFGYD-----------------------------------IKTMNIILNGWCVLGNV 273
E + D T N++++G C+ +
Sbjct: 177 EARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTL 236
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA +K + C P T+ ++A K+GK+ A RL + M + G PDVVT + +
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTL 296
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I LC R+ +A +L +M R C P V T N+LI LCK R++ E LD M
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 356
Query: 394 SCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
S P+ +T+N L+ + E +L M G + TY ++ + +
Sbjct: 357 S--PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ +M+ G P+ +YT +I G G+++ L F EM G+ P+
Sbjct: 415 CGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 5/241 (2%)
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++G C+ + +A+ + D+ + C P VTY ++A K+G L A L + M E G
Sbjct: 51 LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDG 110
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDVVT N ++D LC R+ EAL + EM+ GC PN ++N++I LC+ +++
Sbjct: 111 HVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 170
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
+ EME ++ P+ ++ L+ L K E + RM +G S TYNV++
Sbjct: 171 QVFHEMEARD--IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIH 228
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ ++ M KG P + ++ ++I +G++++A M G VP
Sbjct: 229 GMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVP 288
Query: 500 E 500
+
Sbjct: 289 D 289
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 5/218 (2%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
PDS +Y ++ L K GKL A LFQ + G P V +I LC +A E
Sbjct: 7 SPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ +M RGC P+ TYN +I CK +E + + +M + +P+ +T+N ++
Sbjct: 67 LFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGH--VPDVVTYNTVMDG 124
Query: 409 LKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L K EE + MER GC + ++N I+ D+ + EME + + PD
Sbjct: 125 LCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPD 184
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
SY ++I GL G+L +A F M G+ P T
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVT 222
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 130/274 (47%), Gaps = 5/274 (1%)
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
I+++G G + +A+ ++ ++ S P +V Y + ++ L A LF M
Sbjct: 14 GILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 73
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G P VT N IIDA C + + EA +++++M G +P+V TYN+++ LCK R+E
Sbjct: 74 RGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEE 133
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
+EME+ C PN + N ++ L K ++ V ME + +Y ++
Sbjct: 134 ALLLFNEMERLG--CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGIL 191
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ ++ + M G+ P +Y V+IHG+ L++AL F MR KG
Sbjct: 192 IDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 498 VPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLG 531
P T ++ D + K + E + + ++T G
Sbjct: 252 RPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDG 285
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 51/386 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + A++ RA++ E +++ +EM P+LV TY +L++ MV A
Sbjct: 177 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLV---TYNVLVDALCKLSMVGAA 233
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCR-------------------------------- 235
V + E G ++ F +L+ C+
Sbjct: 234 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDG 293
Query: 236 ----YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
K +E E E + D T + +++G C + EA++ + + S C PD
Sbjct: 294 LCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 353
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
V Y++ ++A K GKL A + Q M ++ + PDVVT N +ID LC +I EA +L
Sbjct: 354 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILE 413
Query: 352 EMKNRG-CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
+M+ G LP+V TY+++I LCK + + LD M + C P+ +T+ ++ L
Sbjct: 414 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK--AGCNPDVVTYTTIIDGLC 471
Query: 411 KP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
K EE ++L+ M+R GC + TY ++ D+ EEM G P+
Sbjct: 472 KCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLV 531
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMR 493
+Y M++GL GR+++A M+
Sbjct: 532 TYNTMVNGLCVSGRIKEAQQLVQRMK 557
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 145/316 (45%), Gaps = 49/316 (15%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++A++D L ++++F+E +V +EM PD TY L++ A +EEA
Sbjct: 282 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAF---TYSALIHGLCKADKIEEA 338
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNG 266
+ R G D+ + +++ C+ K +E +T E K D+ T N +++G
Sbjct: 339 EQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDG 398
Query: 267 WCVLGNV------------------------------------YEAKRFWKDIIKSKCEP 290
C LG + EA++ + K+ C P
Sbjct: 399 LCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP 458
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D VTY T ++ L K G+L A L Q M G P+VVT +I LC +++ EA V+
Sbjct: 459 DVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVM 518
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
EM+N GC PN+ TYN+++ LC R++ + + M+ C P+ T+ ++ +L
Sbjct: 519 EEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALM 578
Query: 411 KP---EEVPWVLERME 423
+E +LE+M+
Sbjct: 579 SSDLVQEAEQLLEQMK 594
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 210/498 (42%), Gaps = 85/498 (17%)
Query: 82 FQRYPGDEIAINVQNILKTCSVSTK-GEIEKALNQCELTLTDDLIVN-VINRYRFDWEAA 139
+R P D+I V IL IE L+ T IV V+N + D + A
Sbjct: 1 MRRAPIDDIPRTVTAILNLLHSGRPWSAIEPDLSPFSGASTTPRIVGRVVNSLK-DAKLA 59
Query: 140 YTFFKWVSRE-GDYSPGSNVFNAILDVLGRARRFVELIQVF-DEM-----PDLVNEKTYG 192
FF+W +S + +N++L VL R ++ E +F E+ PD+ +Y
Sbjct: 60 LAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVC---SYN 116
Query: 193 ILLNRY-------AAAHMVEEAI-------------------------GVFDRRKEFGEL 220
I+++ + AA ++EE G D + G
Sbjct: 117 IVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCD 176
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKR 278
++ + L+ R K +E A E E E G ++ T N++++ C L V A+
Sbjct: 177 PNVVTYTALIAAFARAKKLEEAMKLLE-EMRERGCPPNLVTYNVLVDALCKLSMVGAAQD 235
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
K +I+ P+ +T+ + V+ K+G + A +L M KG +P+VVT + +ID LC
Sbjct: 236 VVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC 295
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ-------- 390
++ EA EVL EMK RG P+ TY++LI LCK ++E + L M
Sbjct: 296 KSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV 355
Query: 391 ----------KNGSCL---------------PNEITFNYLLKS---LKKPEEVPWVLERM 422
K+G L P+ +T+N ++ L K E +LE+M
Sbjct: 356 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQM 415
Query: 423 ERNGCKMS-TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
+ +G + TY+ ++ D + + + M K G PD +YT +I GL GR
Sbjct: 416 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 475
Query: 482 LEDALSYFHEMRLKGMVP 499
LE+A M+ G P
Sbjct: 476 LEEAEYLLQGMKRAGCAP 493
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 140/280 (50%), Gaps = 9/280 (3%)
Query: 225 AFQNLLLWLCRYK-HVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
++ +LL L R K H E + F D+ + NI+++G+C G+++ A +++
Sbjct: 79 SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+ PD+ T+ + A+ G L A+ ++M G P+VVT +I A K++
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKL 195
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
EA+++L EM+ RGC PN+ TYN L+ LCK+ + + + +M + G PN +TFN
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE--GGFAPNVMTFN 253
Query: 404 YLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
L+ K ++ +L M G + + TY+ ++ + + EEM+ +
Sbjct: 254 SLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTR 313
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
G+ PD +Y+ +IHGL ++E+A M G P+
Sbjct: 314 GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 353
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 8/232 (3%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA ++ + + CEPD +Y ++ G L AL L + M G PD T II
Sbjct: 95 EAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPII 154
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
A+ + A++ LR M GC PNV TY +LI + K++E + L+EM ++
Sbjct: 155 TAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERG-- 209
Query: 395 CLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
C PN +T+N L+ +L K V V+++M G + T+N ++ + D R
Sbjct: 210 CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDAR 269
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
M KGM P+ +Y+ +I GL + +A EM+ +G+ P+ T
Sbjct: 270 KLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFT 321
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 125/252 (49%), Gaps = 13/252 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P V+++I+ ++ + +E + EM PD+V TY +++ + E
Sbjct: 351 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVV---TYNTVIDGLCKLGKIAE 407
Query: 207 AIGVFDRRKEFGE-LDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIIL 264
A + ++ +E G+ L D+ + ++ LC+ + A+ + K D+ T I+
Sbjct: 408 AQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTII 467
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G C G + EA+ + + ++ C P+ VTY T ++ L K K+ A R+ + M G
Sbjct: 468 DGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCP 527
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKN--RGCLPNVTTYNSLIKHLCKIKRMETVY 382
P++VT N +++ LC RI EA ++++ MK+ C P+ TY +++ L ++
Sbjct: 528 PNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAE 587
Query: 383 EYLDEMEQKNGS 394
+ L++M+ S
Sbjct: 588 QLLEQMKSTTSS 599
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 172/376 (45%), Gaps = 21/376 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVF--NAILDVLGRARRFVELIQVFDE------MPDLVNE 188
E FF W G NVF N LD+L R R E + +F MP N+
Sbjct: 5 ELVLLFFDWARSR----VGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMP---NK 57
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TYGIL+ +++A ++ AI + + K G + L+ LC V A F +
Sbjct: 58 FTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRA 117
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ D+ T +++ C G EA+ ++++ C PD+VT++T ++ L K G
Sbjct: 118 MAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSE 177
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFK-KRIPEALEVLREMKNRGCLPNVTTYNS 367
A R+ + + ++G II LC K + A +VL + +G P V +N
Sbjct: 178 EQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNL 237
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMER 424
+I CK K +++ Y+ L+ M +K C+PN TF L+ L K E +LE+M
Sbjct: 238 VINGFCKAKDLDSAYKLLEVMIEKG--CVPNVFTFTILITGLCKANRVGEAQQLLEKMVM 295
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
GC + TY+ ++ D ++ ME++ P+ ++ ++I GL R+E+
Sbjct: 296 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 355
Query: 485 ALSYFHEMRLKGMVPE 500
A +H MR G P+
Sbjct: 356 ARQLYHRMRETGCAPD 371
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 174/392 (44%), Gaps = 50/392 (12%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
D +P + A++ L +A +F E + EM PD V T+ L++
Sbjct: 121 DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTV---TFSTLIDGLCKFGSE 177
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAE-------------------- 243
E+A V + + G + +AF+ ++ LC +Y VE+A
Sbjct: 178 EQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNL 237
Query: 244 ---TFFESEKNEFGY-------------DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
F +++ + Y ++ T I++ G C V EA++ + ++
Sbjct: 238 VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGG 297
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
C P+ VTY+T +N L K+G++ A LFQ M + P+VVT N +ID LC KRI EA
Sbjct: 298 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 357
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL- 406
++ M+ GC P++ TYNSLI LCK +++ ++ + + +G N +T++ L
Sbjct: 358 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPE-SGVSAANAVTYSTLFH 416
Query: 407 --KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
+L + + + + G TY ++ Y +V EEM KG P
Sbjct: 417 GYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 476
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ + ++ GL++ E A+ F M +G
Sbjct: 477 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARG 508
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 158/363 (43%), Gaps = 9/363 (2%)
Query: 150 GDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
G SP ++ +++ L G+ EL Q+ + N T+ IL++ A +EE
Sbjct: 296 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 355
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIIL 264
A ++ R +E G D+ + +L+ LC+ V+ A F++ E + T + +
Sbjct: 356 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 415
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G+ LG + +A R + ++ PD TY + + K + + L + M KG
Sbjct: 416 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 475
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P V T + ++ L A+++ M RGC + YN +++ + + + +
Sbjct: 476 PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAV 535
Query: 385 LDE-MEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
L++ +++++ P+ + L++SL K ++ +L +M G + +YN +L
Sbjct: 536 LEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSG 595
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D+ +E M G P+ + V+I L +++DA M G P+
Sbjct: 596 LSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPD 655
Query: 501 PRT 503
T
Sbjct: 656 IET 658
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 131/300 (43%), Gaps = 7/300 (2%)
Query: 240 EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
E+ FF+ ++ G+++ + N L+ C L EA +++ + C P+ TY +
Sbjct: 5 ELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILI 64
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ G L A++L + M G + + V ++ LC R+ EALE R M + C
Sbjct: 65 RGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCA 123
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVP 416
P+V TY +L+ LCK + + L EM + C P+ +TF+ L+ L K E+
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQG--CAPDTVTFSTLIDGLCKFGSEEQAF 181
Query: 417 WVLERMERNGCKMSTDTYNVILKLYVN-WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
VLE + + G S + I++ N ++ + + KG P + ++I+G
Sbjct: 182 RVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVING 241
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
L+ A M KG VP T ++ K GE + + K+ G N
Sbjct: 242 FCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPN 301
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 152/336 (45%), Gaps = 13/336 (3%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD----LVNEKTYGILLNRYAAAHM 203
RE +P +N+++D L ++ + E Q+F +P+ N TY L + YAA
Sbjct: 364 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 423
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNI 262
+ +A +F + G DL+ + +L+L C+ E ++ F + T++
Sbjct: 424 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 483
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK- 321
+L G + A + + + C D++ Y V + + K AL + + + +K
Sbjct: 484 VLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKR 543
Query: 322 GRK--PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
RK P + ++++LC + +A ++L +M RG V++YN L+ L +++R +
Sbjct: 544 DRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWD 603
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNV 436
+ + M + P T N ++ S K ++ +++RM + GC +T N
Sbjct: 604 EATQVFEAMVSAGPA--PEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNT 661
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
++ Y D R EEM + G+ P+ ++ ++
Sbjct: 662 LIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 177/383 (46%), Gaps = 46/383 (12%)
Query: 160 NAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIGVFDRRKE 216
N +L+ R + + +M L +E T+G LLN + V +A+ +FD+
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
G ++ + ++ LC+ K V+ A + EK+ G D+ T N +++G C G +
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A R + K + PD T+ ++A K+G++ A ++ M + PD+VT + +I
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN--- 392
LC R+ EA E+ M ++GC P+V TY+ LI CK K++E + EM Q+
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 393 ----------GSCL--------------------PNEITFNYLLKSL---KKPEEVPWVL 419
G C PN IT+N LL L K E+ +L
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE---EMEKKGMGPDQRSYTVMIHGL 476
M++NG TYN+I++ +V W+ + +G+ PD +YT M+ GL
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCK---AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Query: 477 YDKGRLEDALSYFHEMRLKGMVP 499
Y KG +A + F +M+ G++P
Sbjct: 477 YKKGLRREADALFRKMKEDGILP 499
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 141/299 (47%), Gaps = 6/299 (2%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+++++ +F + L ++ F LL + + K +V +E + +++ T NI
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+LN +C + A F +IK EP VT+ + +N + ++ AL +F M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
KP+VV N IID LC K++ AL++L M+ G P+V TYNSLI LC R
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
+ M ++ P+ TFN L+ + K E E M R TY++++
Sbjct: 242 RMVSCMTKR--EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ D+ + M KG PD +Y+++I+G ++E + F EM +G+V
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 13/271 (4%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
W A +++ Y P FNA++D + R E + ++EM PD+V
Sbjct: 237 WSDATRMVSCMTKREIY-PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV--- 292
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
TY +L+ ++EA +F G D+ + L+ C+ K VE + F E
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ + T I++ G+C G + A+ ++ ++ P+ +TY ++ L GK+
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL + M + G D+VT N II +C + +A ++ + +G +P++ TY ++
Sbjct: 413 EKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTM 472
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ L K K + + L +++G LPNE
Sbjct: 473 MLGLYK-KGLRREADALFRKMKEDGI-LPNE 501
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 36/222 (16%)
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+++ + P ++ ++A++K K + L++ M G ++ TCN +++ C +
Sbjct: 72 MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL-PNEIT 401
+ AL L +M G P++ T+ SL+ C+ R VY+ L +Q G PN +
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR---VYDALYMFDQMVGMGYKPNVVI 188
Query: 402 FNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
+N ++ L K ++V L+ + R MEK G
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNR--------------------------------MEKDG 216
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+GPD +Y +I GL GR DA M + + P+ T
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 132/246 (53%), Gaps = 5/246 (2%)
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
I T ++NG C +G +A + D++ C+PD TY T +N L K G+ A L +
Sbjct: 163 IVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLK 222
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M E G +P++VT + +ID+LC + + EAL++ MK +G P++ TY SLI+ LCK
Sbjct: 223 KMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFS 282
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDT 433
R + L+EM N +P+ +TFN L+ + K E VL+ M G + + T
Sbjct: 283 RWKEASALLNEMTSLN--IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT 340
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y+ ++ Y W + R + M KG P+ SY ++I+G R+++A+ F+EM
Sbjct: 341 YSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMI 400
Query: 494 LKGMVP 499
+G+ P
Sbjct: 401 HQGLTP 406
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 164/354 (46%), Gaps = 9/354 (2%)
Query: 154 PGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N I++ L G L++ +E N TY L++ +V EA+ +
Sbjct: 196 PDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDI 255
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCV 269
F K G D+ + +L+ LC++ + A E DI T N++++ +C
Sbjct: 256 FSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCK 315
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G V EA K + + EP+ VTY++ + + + A +LF M KG KP++ +
Sbjct: 316 EGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFS 375
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I+ C KRI EA+++ EM ++G PN +YN+LI C++ ++ + M
Sbjct: 376 YNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNM- 434
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDC 446
NG+ LP+ T++ LL K + + M+ K + Y +++
Sbjct: 435 CTNGN-LPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGN 493
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
R + E+ +G+ P + YT +I+GL +G L++AL F M G P+
Sbjct: 494 HKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPD 547
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 1/204 (0%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
+Y IL+N Y A ++EA+ +F+ G + ++ L+ C+ + A+ F +
Sbjct: 375 SYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNM 434
Query: 250 -KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
N D+ T +I+L+G+C G + +A R ++ + + +P+ V Y V+A+ K G
Sbjct: 435 CTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNH 494
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A +LF ++ +G +P V II+ LC + + EALE R M+ GC P+ +YN +
Sbjct: 495 KDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVI 554
Query: 369 IKHLCKIKRMETVYEYLDEMEQKN 392
I+ L + K + EM +
Sbjct: 555 IRGLLQHKDESRALLLVGEMRDRG 578
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 5/218 (2%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
P+ T + F+N + ++ + + + G +P +VT +I+ LC +A+E
Sbjct: 125 SPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVE 184
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ +M +GC P+V TYN++I LCKI L +ME+ C PN +T++ L+ S
Sbjct: 185 LFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEE--AGCQPNMVTYSTLIDS 242
Query: 409 LKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L + V L+ M+ G TY +++ + + EM + PD
Sbjct: 243 LCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPD 302
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ V++ +G++ +AL M G+ P T
Sbjct: 303 IVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT 340
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 4/213 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N +++ +A+R E +Q+F+EM N +Y L++ + + EA +
Sbjct: 371 PNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDL 430
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF-GYDIKTMNIILNGWCV 269
F G L DL + LL C+ ++ A F + ++ + ++ I+++ C
Sbjct: 431 FRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCK 490
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
GN +A++ + ++ +P Y T +N L K+G L AL F+ M G PD ++
Sbjct: 491 SGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEIS 550
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
N II L K AL ++ EM++RG + +V
Sbjct: 551 YNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 200/414 (48%), Gaps = 33/414 (7%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
E++ +L + +L+ ++ + R +A + FF+WV +G ++ + ++++LG
Sbjct: 174 ELQSSLAELAPSLSKTTVLQTLQLIRTPAKALH-FFRWVEAKG-FTHNEQSYFLMIEILG 231
Query: 168 RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
R+R +L + + + + + E+I VF KE G + F
Sbjct: 232 RSR-------------NLNAARNFVFSIEKKSGG---AESIKVFKTMKEIGVSPSVVTFN 275
Query: 228 NLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
+LL + + +A+ F+ + +G D T NI++ G+C+ V E F+K++ +
Sbjct: 276 SLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSR 335
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR--KPDVVTCNCIIDALCFKKRI 343
KC+PD VTY T V+ L + GK+ A + + M +K P+VVT +I C K+ +
Sbjct: 336 FKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDM 395
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
EAL +L EM +RG PN TYN+LI+ LC+ ++++ + E L+ M +G +P+ T N
Sbjct: 396 AEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGM-VGDGGFIPDTCTLN 454
Query: 404 YLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
L+K+ + K EE V E+M + + TY+V+++ + ++E+ +K
Sbjct: 455 TLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEK 514
Query: 461 -------GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
G P +Y M L G+ + A F ++ +G P L+
Sbjct: 515 EILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLI 568
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 116/287 (40%), Gaps = 21/287 (7%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
KG ++K+ N +T ++ + EA + VSR P +N ++
Sbjct: 366 KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSR--GLKPNKITYNTLIQG 423
Query: 166 LGRARRFVELIQVFDEM-------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
L A++ ++ ++ + M PD T L+ + +EEA VF++ E
Sbjct: 424 LCEAQKLDKIKEILEGMVGDGGFIPDTC---TLNTLIKAHCTMGKLEEAFSVFEKMSELR 480
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDI------KTMNIILNGWCVL 270
D + + L+ LC+ AE FF+ +EK +D+ N + C
Sbjct: 481 VQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSN 540
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G +A+R ++ ++K + D +Y T + ++G L M + PD T
Sbjct: 541 GKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETY 599
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
+ID L K A + L +M LP ++S++ L + +R
Sbjct: 600 GLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKER 646
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 169/354 (47%), Gaps = 9/354 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P F +L + + + + ++ + +M N T IL+N + + A V
Sbjct: 57 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCV 269
+ + G +++ F L+ LC + EV F + F ++ T ++NG C
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+G+ A R + + + C+PD V Y + +++L K ++ A LF M +G P + T
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I ALC +L EM N +PNV +++++ LCK ++ ++ +D M
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
++ PN +T+N L+ + +E V + M G +Y+ ++ Y
Sbjct: 297 KRGVE--PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 354
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+K + +EEM +K + P+ +Y+ ++HGL GRL+DA++ FHEM +G +P+
Sbjct: 355 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD 408
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 185/406 (45%), Gaps = 51/406 (12%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A++ + + G + P FN ++ L + E++ +FD+M P++V TYG
Sbjct: 113 AFSVLAKILKLG-HQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVV---TYG 168
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKN 251
L+N AI + ++ D+ + +++ LC+ + V A F E
Sbjct: 169 TLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQ 228
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
I T N +++ C L +++ SK P+ V ++T V+AL K+GK+ A
Sbjct: 229 GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA 288
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ M ++G +P+VVT N ++D C + + EA++V M +G P+V +Y++LI
Sbjct: 289 HDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLING 348
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--------------------KK 411
CKI+R+E +EM +K +PN +T++ L+ L +
Sbjct: 349 YCKIQRIEKAMYLFEEMCRKE--LIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 406
Query: 412 PEEVPW--VLERMERN--------------GCKMSTDT--YNVILKLYVNWDCEDKVRHT 453
P+ V + +L+ + +N G M D Y +++ + R
Sbjct: 407 PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 466
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + KG+ P+ +YT+MI+GL +G L +A F EM+ KG P
Sbjct: 467 FSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSP 512
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 163/349 (46%), Gaps = 10/349 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A+ F + +G SP +N+++ L + + + +EM + + N + ++
Sbjct: 218 AFNLFSEMIHQG-ISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 276
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FG 254
+ V EA V D + G ++ + L+ C ++ A F++ + F
Sbjct: 277 DALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFA 336
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ + + ++NG+C + + +A ++++ + + P++VTY+T ++ L G+L A+ L
Sbjct: 337 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIAL 396
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M +G+ PD V+ ++D LC +R+ EA+ +L+ ++ P++ Y +I +C+
Sbjct: 397 FHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCR 456
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMST 431
+E + + K PN T+ ++ L + E + M+R G +
Sbjct: 457 AGELEAARDLFSNLSSKGLH--PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNG 514
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
TYN+I + ++ + + +EM +G D + TV++ L D G
Sbjct: 515 CTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 563
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 125/262 (47%), Gaps = 5/262 (1%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLV-NEK 189
R + + A F + +G ++P ++ +++ + +R + + +F+EM +L+ N
Sbjct: 317 RSEMDEAVKVFDTMVCKG-FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTV 375
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY L++ +++AI +F G++ D ++ LL +LC+ + ++ A ++
Sbjct: 376 TYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAI 435
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
E + DI+ I+++G C G + A+ + ++ P+ TY +N L ++G L
Sbjct: 436 EGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLL 495
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A +LF M KG P+ T N I +++L+EM RG +V+T L
Sbjct: 496 AEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVL 555
Query: 369 IKHLCKIKRMETVYEYLDEMEQ 390
++ L ++V + L E Q
Sbjct: 556 VEMLSDDGLDQSVKQILSEFLQ 577
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 174/365 (47%), Gaps = 18/365 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + ++ ++ L + + E +++ EM P + + Y L+ A A
Sbjct: 73 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSM---QAYSSLVRALAKAR 129
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMN 261
V+ A +FD G D F L+L LC+ V + +E F + K+ ++ N
Sbjct: 130 RVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYN 189
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++L+G C G + +A + ++ C PD VTY T ++A+ K ++ +LF+AM
Sbjct: 190 VLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAA 249
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P+V+T + +I LC + +ALEV M GC PN TY +LI LC+ +++
Sbjct: 250 GYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQA 309
Query: 382 YEYLDEMEQKNGSCL-PNEITFNYLLKSLKKP---EEVPWVLERMERN-GCKMSTDTYNV 436
E ++M Q +C+ P+ + +N L+ K +E + M G + + T+N
Sbjct: 310 RELFEKMTQ---ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNT 366
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ + + EM KG+ D +Y ++I GL +L++AL + +MR K
Sbjct: 367 LIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKK 426
Query: 497 MVPEP 501
+ +P
Sbjct: 427 FLLDP 431
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 37/316 (11%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY ++ EE+ V + G D+ AF ++ R ++E A ++
Sbjct: 12 TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQ-H 70
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E GY D + +I+++G +G + E+ + +++ P Y++ V AL K +
Sbjct: 71 MVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARR 130
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A LF M G PD + +I LC ++ +A E ++M GC PNV YN
Sbjct: 131 VDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNV 190
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC 427
L+ LC ++E EM K+ SC P+ +T+N LL ++ K V GC
Sbjct: 191 LLHGLCSSGQLEQANTLFAEM--KSHSCSPDVVTYNTLLDAVCKARRV--------EEGC 240
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
K+ +E M G P+ +++ +IHGL G LE AL
Sbjct: 241 KL------------------------FEAMRAAGYVPNVITFSTLIHGLCRTGELEKALE 276
Query: 488 YFHEMRLKGMVPEPRT 503
F M G P T
Sbjct: 277 VFGSMLEAGCKPNKYT 292
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 144/332 (43%), Gaps = 19/332 (5%)
Query: 77 DEKSEFQRYP--GDEIAINVQNILKTCSVSTKGEIEKA--------LNQCEL-TLTDDLI 125
D F++ P G + + V N+L + + G++E+A + C +T + +
Sbjct: 168 DASERFKQMPKHGCQPNVPVYNVLLH-GLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTL 226
Query: 126 VNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL 185
++ + + R E F R Y P F+ ++ L R + ++VF M +
Sbjct: 227 LDAVCKARRVEEGCKLF--EAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 284
Query: 186 ---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
N+ TY L++ A V +A +F++ + D A+ +L+ C+ ++ A
Sbjct: 285 GCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 344
Query: 243 ETFFESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
E + G I T N +++G+C LG + A ++ DS TY +
Sbjct: 345 EKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIA 404
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L++ KL AL +++ M EK D V+C + LC I +A V + G +P
Sbjct: 405 GLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVP 464
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
N T+ L + L K+ R+E + ++ + ++
Sbjct: 465 NPETFRILSESLIKLGRVEDAQKLMEPAKARD 496
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 398 NEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N T++ ++KSL KPEE VLE M GC +N +++ + + +K R +
Sbjct: 9 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ M + G PD SY ++IHGL G+L+++L EM ++G P
Sbjct: 69 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTP 113
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M +K +V T + II +L + + E+ +VL EM GC P+V +N +++ +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 378 MET---VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMST 431
ME VY+++ E K P+ ++++ L+ L K +E +L M G S
Sbjct: 61 MEKAREVYQHMVESGYK-----PDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSM 115
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
Y+ +++ D ++EM + G PD+ + +I GL G+++DA F +
Sbjct: 116 QAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQ 175
Query: 492 MRLKGMVPE-PRTGILVNDM 510
M G P P +L++ +
Sbjct: 176 MPKHGCQPNVPVYNVLLHGL 195
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 169/354 (47%), Gaps = 9/354 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P F +L + + + + ++ + +M N T IL+N + + A V
Sbjct: 66 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCV 269
+ + G +++ F L+ LC + EV F + F ++ T ++NG C
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+G+ A R + + + C+PD V Y + +++L K ++ A LF M +G P + T
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I ALC +L EM N +PNV +++++ LCK ++ ++ +D M
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
++ PN +T+N L+ + +E V + M G +Y+ ++ Y
Sbjct: 306 KRGVE--PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 363
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+K + +EEM +K + P+ +Y+ ++HGL GRL+DA++ FHEM +G +P+
Sbjct: 364 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD 417
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 185/406 (45%), Gaps = 51/406 (12%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A++ + + G + P FN ++ L + E++ +FD+M P++V TYG
Sbjct: 122 AFSVLAKILKLG-HQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVV---TYG 177
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKN 251
L+N AI + ++ D+ + +++ LC+ + V A F E
Sbjct: 178 TLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQ 237
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
I T N +++ C L +++ SK P+ V ++T V+AL K+GK+ A
Sbjct: 238 GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA 297
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ M ++G +P+VVT N ++D C + + EA++V M +G P+V +Y++LI
Sbjct: 298 HDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLING 357
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--------------------KK 411
CKI+R+E +EM +K +PN +T++ L+ L +
Sbjct: 358 YCKIQRIEKAMYLFEEMCRKE--LIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 415
Query: 412 PEEVPW--VLERMERN--------------GCKMSTDT--YNVILKLYVNWDCEDKVRHT 453
P+ V + +L+ + +N G M D Y +++ + R
Sbjct: 416 PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 475
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + KG+ P+ +YT+MI+GL +G L +A F EM+ KG P
Sbjct: 476 FSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSP 521
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 163/349 (46%), Gaps = 10/349 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A+ F + +G SP +N+++ L + + + +EM + + N + ++
Sbjct: 227 AFNLFSEMIHQG-ISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 285
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FG 254
+ V EA V D + G ++ + L+ C ++ A F++ + F
Sbjct: 286 DALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFA 345
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ + + ++NG+C + + +A ++++ + + P++VTY+T ++ L G+L A+ L
Sbjct: 346 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIAL 405
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M +G+ PD V+ ++D LC +R+ EA+ +L+ ++ P++ Y +I +C+
Sbjct: 406 FHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCR 465
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMST 431
+E + + K PN T+ ++ L + E + M+R G +
Sbjct: 466 AGELEAARDLFSNLSSKGLH--PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNG 523
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
TYN+I + ++ + + +EM +G D + TV++ L D G
Sbjct: 524 CTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 572
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 125/262 (47%), Gaps = 5/262 (1%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLV-NEK 189
R + + A F + +G ++P ++ +++ + +R + + +F+EM +L+ N
Sbjct: 326 RSEMDEAVKVFDTMVCKG-FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTV 384
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY L++ +++AI +F G++ D ++ LL +LC+ + ++ A ++
Sbjct: 385 TYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAI 444
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
E + DI+ I+++G C G + A+ + ++ P+ TY +N L ++G L
Sbjct: 445 EGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLL 504
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A +LF M KG P+ T N I +++L+EM RG +V+T L
Sbjct: 505 AEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVL 564
Query: 369 IKHLCKIKRMETVYEYLDEMEQ 390
++ L ++V + L E Q
Sbjct: 565 VEMLSDDGLDQSVKQILSEFLQ 586
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 175/347 (50%), Gaps = 20/347 (5%)
Query: 164 DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
D++ +A VE ++ PD+ +++ +L+ + + + DR E G +
Sbjct: 8 DLVAQAEAIVEEMKYAGFSPDV---QSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNA 64
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
+ NL+ LC+ + AE++ + ++ + NII++G+C N+ +A F +++
Sbjct: 65 ILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREM 124
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+ P Y++ V + K G + A+ +F M KG +PD+V N ++ L ++I
Sbjct: 125 EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKI 184
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
EA E+ R M +RGC P+V TYN++I LCK K+++ L+ M+Q++ S P +T+
Sbjct: 185 HEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVS--PTFVTYT 242
Query: 404 YLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK----VRHTWEE 456
L+ L K ++ V E+M C + Y+V+ + +N C+ + + ++E
Sbjct: 243 TLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVL--ILINGLCKARRPGEAKEMFQE 300
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDA--LSYFHEMRLKGMVPEP 501
M +G+ P +Y ++ GL +L+DA L+YF + VP P
Sbjct: 301 MRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYF----MLDQVPAP 343
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 172/430 (40%), Gaps = 88/430 (20%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEE 206
E P + ++N ++ L +A E MP N +Y I+++ Y A +E+
Sbjct: 57 EAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEK 116
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A+ +E G A+ +++ C+ +V A + F E DI N++L+
Sbjct: 117 ALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLS 176
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G ++EA+ ++ + C+PD VTY T + L K KL A+ L + M ++ P
Sbjct: 177 GLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSP 236
Query: 326 DVVT----------------------------CNC---------IIDALCFKKRIPEALE 348
VT C C +I+ LC +R EA E
Sbjct: 237 TFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKE 296
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKR----METVYEYLDEMEQKNGSCLPNEITFNY 404
+ +EM+ RG P V TYN+L++ L + ME Y LD++ PN T+
Sbjct: 297 MFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPA------PNMFTYEI 350
Query: 405 LLKSLKKPEEVP--------------------W--VLERMERNG---------------- 426
L+ SL K ++V W +L R+ R G
Sbjct: 351 LISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRIN 410
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
C+ + N++L + D+ + ++M G+ PD+ +Y ++ GL +G+ + A
Sbjct: 411 CQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQAR 470
Query: 487 SYFHEMRLKG 496
E+ G
Sbjct: 471 KLVEELVRDG 480
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 166/354 (46%), Gaps = 39/354 (11%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N++L L RARR + + + +M P++V TYG L++ V++A
Sbjct: 259 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVV---TYGTLIDGLCKVGRVKDA 315
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNG 266
+ + G DL + L+ LC+ V+ + + D+ T + ++ G
Sbjct: 316 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 375
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C + EA R + C PD + Y+T ++ L K GK+ A L++ M G D
Sbjct: 376 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDAD 435
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT + +ID LC R+ EA +L M G P+ TYNSLIK LC + ++ E ++
Sbjct: 436 VVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 495
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
EME+ N C P+ +T+N L+ + RMER D+ V+L+
Sbjct: 496 EMERSN--CAPSAVTYNILIHGMC----------RMER------VDSAVVLLE------- 530
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ K R + G D +Y+ +I GL GR+ +AL YF EM G++P+
Sbjct: 531 QAKARC----VAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPD 580
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 166/353 (47%), Gaps = 16/353 (4%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIGVFDRR 214
++ A+L L + +R + + + EM D E TY L++ + + A +F+
Sbjct: 81 IYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM 140
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK--------TMNIILNG 266
K + + LL L R +E A F+ + +D+ T +++++G
Sbjct: 141 KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDG 200
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C V +A + + C PD +TY V+ L K+ K+ A + + M + G P+
Sbjct: 201 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 260
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+VT N ++ LC +R+ +AL ++R+M RGC PNV TY +LI LCK+ R++ L
Sbjct: 261 LVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLA 320
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVN 443
+M K G+ P+ + +N L+ L K ++V +L R G K TY+ ++
Sbjct: 321 DMIDKGGT--PDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 378
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ D+ ++ +G PD Y+ +I GL G++++A + M G
Sbjct: 379 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDG 431
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 135/303 (44%), Gaps = 52/303 (17%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ T +L G+C G + +A+R + ++ P+ + ++ L K + ALR F
Sbjct: 8 DVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCF 67
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK- 374
+AM G D V ++ L +KR+ +AL +L EM++ GC PNV TYNSLI LCK
Sbjct: 68 RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN 127
Query: 375 --IKRMETVYEYLDEME-------------------------------------QKNGSC 395
R + ++E++ +E + C
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRC 187
Query: 396 LPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDC-EDKVR 451
PN IT++ L+ L K V +LE M+ GC TY ++ V+ C E KV
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTIL----VDGLCKESKVA 243
Query: 452 HTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILV 507
WE EM G P+ +Y ++HGL R+ DAL+ +M +G P T G L+
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303
Query: 508 NDM 510
+ +
Sbjct: 304 DGL 306
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 143/323 (44%), Gaps = 52/323 (16%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + ++D L + R + + +M PDL+ Y +L+N A V+E
Sbjct: 293 TPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLM---IYNMLINGLCKADQVDE 349
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILN 265
+I + R G D+ + +++ LCR + E + D+ + +++
Sbjct: 350 SIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLID 409
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G V EA ++ + C+ D VTY+T ++ L K G++ A L M G P
Sbjct: 410 GLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPP 469
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+T N +I LC + EA+E++ EM+ C P+ TYN LI +C+++R+++ L
Sbjct: 470 STMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLL 529
Query: 386 DEMEQK------------------NGSC--------------------LPNEITFNYLLK 407
++ + + +G C +P+ IT++ LL+
Sbjct: 530 EQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLE 589
Query: 408 SLKKPEEV----PWVLERMERNG 426
LKK +++ VL++M + G
Sbjct: 590 GLKKSKDLHELRHLVLDQMVQLG 612
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 120/256 (46%), Gaps = 18/256 (7%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
G P +++++ L R+ R E ++ + PD++ Y L++ A
Sbjct: 359 SGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVI---LYSTLIDGLCKAG 415
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM-- 260
V+EA +++ G D+ + L+ LC+ V+ A + G TM
Sbjct: 416 KVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLL-ARMVRMGTPPSTMTY 474
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ---- 316
N ++ G C L ++ EA +++ +S C P +VTY ++ + + ++ +A+ L +
Sbjct: 475 NSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKA 534
Query: 317 -AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ G D + + +ID LC R+ EAL+ +EM + G +P+ TY+ L++ L K
Sbjct: 535 RCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKS 594
Query: 376 KRM-ETVYEYLDEMEQ 390
K + E + LD+M Q
Sbjct: 595 KDLHELRHLVLDQMVQ 610
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 192/409 (46%), Gaps = 13/409 (3%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D + A F K ++ E +P +N ++D L +A + + ++ EM PD V
Sbjct: 241 DCDGALEFLKEMN-ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTV-- 297
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-E 247
T+ +++ A E A + E + L+ LC+ ++V+ A+ E
Sbjct: 298 -TFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDE 356
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ F D+ T +I+ +G C G + EA K++ C P+ VTY T ++ L K K
Sbjct: 357 FVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASK 416
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
A L +++ G PDVVT I+D LC + R+ +AL+++ M RGC P+V TY +
Sbjct: 417 TEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTA 476
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC 427
L++ LC+ R++ + EM K+ C + + + L+ K + ++
Sbjct: 477 LMEGLCRTGRVDEAHHIFKEMVSKD--CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG 534
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
D YN ++ Y D++ + +E+M +G P+ ++Y +++ GL G++++A
Sbjct: 535 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 594
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
+ M G VP+ + ++ D K + E + + ++ G+ +A
Sbjct: 595 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDA 643
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 161/358 (44%), Gaps = 12/358 (3%)
Query: 153 SPGSNVFNAILDVLGRARRFV---ELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIG 209
+P + FN+I+D L +A +F L+ V E + TY L++ V+ A
Sbjct: 293 TPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKD 352
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+ D G + D+ + L LC+ ++ A E E ++ T N +++G C
Sbjct: 353 LVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLC 412
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+A + ++ S PD VTY V+ L K+G+L AL++ + M ++G P V+
Sbjct: 413 KASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI 472
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +++ LC R+ EA + +EM ++ C + Y SL+ CK R + + +D +
Sbjct: 473 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI 532
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
P +N L+ K +E+P V E M GC + TYN+++
Sbjct: 533 RGT-----PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHG 587
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ E M G PD SY ++I GL+ + ++A +M G+ P+ T
Sbjct: 588 KVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVT 645
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 172/409 (42%), Gaps = 40/409 (9%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLN 196
+ A+T G + P +V+ + + R + +++F +P + Y +++
Sbjct: 177 DKAFTMLDKAKVRG-FKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS-PDAIAYNAIIH 234
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGY 255
+ + + A+ E D+ + L+ LC+ + A E E
Sbjct: 235 GHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTP 294
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D T N I++G C G A + + C P TY T ++ L K+ + A L
Sbjct: 295 DTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLV 354
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
G PDVVT + + D LC + RI EA E+++EM +GC PN+ TYN+LI LCK
Sbjct: 355 DEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKA 414
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTD 432
+ E YE L+ + + +P+ +T+ ++ L K + L E M + GC S
Sbjct: 415 SKTEKAYELLESL--VSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI 472
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG----------------- 475
TY +++ D+ H ++EM K D +Y +++G
Sbjct: 473 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI 532
Query: 476 -----------LYD----KGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
L D +GRL++ + F +M +G VP +T +V D
Sbjct: 533 RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMD 581
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 169/380 (44%), Gaps = 41/380 (10%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P +V+NA++D + R E+ VF++M + N KTY I+++ V+EA
Sbjct: 535 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 594
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
+ G + D+ ++ ++ L + K E + + + D T N ++ +C
Sbjct: 595 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 654
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+A K++IK+ +PD+VTY T ++ L++ +LG A L M G
Sbjct: 655 KEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSAC 714
Query: 329 TC-NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T N IID LC + + +AL ++ M G N TYN I LCK R++ L E
Sbjct: 715 TTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSE 774
Query: 388 ME--------------------------------QKNGSCLPNEITFNYLLKSL---KKP 412
M+ G C+ + TFN L+ + K+
Sbjct: 775 MDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH-TFNLLIDAFTKTKRL 833
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+E +L M + GC S TYN+++ D DK ++EM +G+ SYTV+
Sbjct: 834 DEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVL 893
Query: 473 IHGLYDKGRLEDALSYFHEM 492
I+GL +GR ++AL EM
Sbjct: 894 IYGLCGQGRGKEALQVLEEM 913
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 175/388 (45%), Gaps = 21/388 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P + A+++ L R R E +F EM + Y L+N Y + +EA
Sbjct: 468 TPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK 527
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWC 268
V D + +D + L+ C+ + E+ F + +IKT NI+++G C
Sbjct: 528 VVDGIRGTPYID---VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLC 584
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G V EA F + + + C PD V+Y ++ L K K A ++ M + G PD V
Sbjct: 585 KHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAV 644
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N ++ C ++R +A+ +L+ M G P+ TYN+LI L + R+ YE + EM
Sbjct: 645 TYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 704
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+NG + T+N ++ L K ++ +++ M +G + +T TYN+ +
Sbjct: 705 -LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEG 763
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM-RLKGMVPEPRTG 504
D+ EM+ D+ SYT +I GL +L+ A EM +KG+ T
Sbjct: 764 RLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTF 820
Query: 505 ILVNDMNIKLKERGEQGKKVIKLTSLGL 532
L+ D K K E LT LGL
Sbjct: 821 NLLIDAFTKTKRLDEA------LTLLGL 842
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 141/331 (42%), Gaps = 45/331 (13%)
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGW 267
+F+R + G D + ++ LC+ ++ A T + K F ++ I+ +
Sbjct: 146 AMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAF 205
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G + +A +++I PD++ Y ++ +K AL + M E+ PDV
Sbjct: 206 CKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDV 261
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T N +ID LC + +A E+L EM +RG P+ T+NS++ LCK + E + L
Sbjct: 262 FTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAV 321
Query: 388 MEQKNGSCLPNEITFNYLLKSLKK--------------------PEEVPW---------- 417
M ++N C P+ T+N L+ L K P+ V +
Sbjct: 322 MAERN--CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKR 379
Query: 418 --------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+++ M GC + TYN ++ +K E + G PD +Y
Sbjct: 380 GRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTY 439
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
T+++ GL +GRL+ AL M +G P
Sbjct: 440 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 470
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 121/300 (40%), Gaps = 37/300 (12%)
Query: 235 RYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
R K + A FF + F + T N L G+ ++ ++ + PDS
Sbjct: 102 RLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSY 161
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV---- 349
TY + +L + ++ A + +G KP+V + A C R+ +ALE+
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI 221
Query: 350 ---------------------------LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
L+EM R P+V TYN LI LCK + +
Sbjct: 222 PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKAS 281
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
E L EM + + P+ +TFN ++ L K E +L M C+ S TYN ++
Sbjct: 282 EMLHEMVDRGVT--PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLIS 339
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ + +E G PD +Y+++ GL +GR+++A EM KG P
Sbjct: 340 GLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTP 399
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 8/225 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
AY + R G +N I+D L + + + + D M N TY I +
Sbjct: 697 AYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 756
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+R ++EA + E L D ++ +++ LC+ + ++ A G
Sbjct: 757 DRLCKEGRLDEASSLL---SEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL 813
Query: 256 DIK--TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
I T N++++ + + EA +++ C P +TY + L K K+ A
Sbjct: 814 CITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWE 873
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
LF M +G V+ +I LC + R EAL+VL EM + C
Sbjct: 874 LFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDC 918
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ +EQ G+ P ++ +L+ LK P+ G K ST T N L+ +
Sbjct: 82 ERLEQWRGTLQPAVVS--RVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENG 139
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D++ +E M G PD +Y ++I L +++ A + + +++G PE
Sbjct: 140 SSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPE 194
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 174/358 (48%), Gaps = 18/358 (5%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAI 208
+ P + +N ++D L +A E ++V D M + E TYGIL+N A +E A
Sbjct: 256 FPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAE 315
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNG 266
+F G + + +L+ + ++ A + F+ E E GY D+ T ++++G
Sbjct: 316 ELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFD-EMVEAGYRPDVITHTVMIDG 374
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C GN +A + ++++++ C+P+ VTY T + L+K G++ A R+ + M G PD
Sbjct: 375 LCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPD 434
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VT C++D C R+ EA ++L E+ PN+ Y+SL+ LC +E + L
Sbjct: 435 SVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLF 494
Query: 387 EMEQKNGSCLPNEITFNYLLKSLK--KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
E + L + + ++ K + +E + +RM GCK TYN++ +N
Sbjct: 495 EQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNIL----ING 550
Query: 445 DC---EDKVRHTW---EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
C E++V + ++EK G PD +YT + GL G ++ A+ E +G
Sbjct: 551 LCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 165/368 (44%), Gaps = 17/368 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
++ Y + + + G +P + FN ++ R RR + + F+ M PDL
Sbjct: 134 NYSQCYAIHEEMLKAG-IAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDL--- 189
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL-WLCRYKHV-EVAETFF 246
T+ IL++ A M E+A VF G + A ++ L + K V E E F
Sbjct: 190 HTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFG 249
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ EK F D N +++G G+ EA + +++ C P VTY VN+L K G
Sbjct: 250 QMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAG 309
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
L A LF+ M G +P+ V +I R+ EA + EM G P+V T+
Sbjct: 310 TLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHT 369
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERME 423
+I LCK E + +EM + G C PN +T+ +++ L K V +++ M
Sbjct: 370 VMIDGLCKSGNFEQAAKSFEEMMR--GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMI 427
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+GC + TY +L + D+ +E++K P+ + Y+ +++GL D G +E
Sbjct: 428 AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVE 487
Query: 484 DALSYFHE 491
L E
Sbjct: 488 KTLDDLFE 495
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/472 (22%), Positives = 190/472 (40%), Gaps = 74/472 (15%)
Query: 85 YPGDEIAINVQNILKTCSVSTKGEIEKALN--------QCELT-LTDDLIVNVINRYRFD 135
+P D IA N ++ G ++AL C T +T ++VN + +
Sbjct: 256 FPPDAIAYNTM----IDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAG-T 310
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
E A F+ ++ G + P S ++ +++ ++ R E +FDEM PD++
Sbjct: 311 LERAEELFRVMAASG-FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVI--- 366
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
T+ ++++ + E+A F+ G ++ + ++ L + V A F
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA---FRIM 423
Query: 250 KNEFGY----DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT-- 303
K + D T +L+G+C LG + EA + ++ K P+ Y++ VN L
Sbjct: 424 KGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDG 483
Query: 304 ----------------------------------KKGKLGTALRLFQAMWEKGRKPDVVT 329
K G+L A R+FQ M +G KPD T
Sbjct: 484 GSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATT 543
Query: 330 CNCIIDALCFKK--RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
N +I+ LC + R+ A +L +++ G LP+ TY L LCKI ++ + L+E
Sbjct: 544 YNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEE 603
Query: 388 MEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
+ + + + + L L + + + + M R G Y I+ +
Sbjct: 604 ASSRGWN--ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKV 661
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ ++EM KG P +YT ++ L G +++A F M +G
Sbjct: 662 KKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARG 713
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 8/274 (2%)
Query: 242 AETFFE--SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
A +FF E+ F +D+ T N ++N N + ++++K+ P++ ++ +
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILI 161
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ + + A+ F+ M K KPD+ T ++D LC +A EV EM G +
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFV 221
Query: 360 -PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEV 415
P+ + ++++ L K KR++ E +ME+ P+ I +N ++ L K +E
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFP--PDAIAYNTMIDGLAKAGHAQEA 279
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
VL+ M C + TY +++ ++ + M G P+ YT +IHG
Sbjct: 280 LKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHG 339
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
GR+++A S F EM G P+ T ++ D
Sbjct: 340 FAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID 373
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 160/385 (41%), Gaps = 35/385 (9%)
Query: 58 FLFLGRI-ETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQC 116
F LGR+ E AQL+ L Q Y +N + G +EK L+
Sbjct: 445 FCKLGRLDEAAQLLDELDKCSSSPNLQLYSS---LVN--------GLCDGGSVEKTLDDL 493
Query: 117 -----------ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
+ L +IV + R D EA F + VS EG P + +N +++
Sbjct: 494 FEQSKAAAETLDPGLCCSIIVGLCKTGRLD-EACRIFQRMVS-EG-CKPDATTYNILING 550
Query: 166 LGRAR-----RFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
L R+R R L+ +++ L + TY L V+ A+ + + G
Sbjct: 551 LCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRF 279
D+ A+ L LC V+ A + F+ + G D I+NG + + +A +F
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKF 670
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR-KPDVVTCNCIIDALC 338
+ ++I +P TY V AL G + A F++M +G V+ + +I C
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFC 730
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
++ AL++ +M +RG +P T SL L + + E E L EM G P+
Sbjct: 731 KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAA--GGSPPH 788
Query: 399 EITFNYLLKSLKKPEEVPWVLERME 423
TF +L L+K +E +L+ ++
Sbjct: 789 AATFTAILDGLRKSDESGKLLKLVQ 813
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 7/279 (2%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF---FESEKNEFGYDIKTM 260
++EA +F R G D + + L+ LCR + V F + EK + D T
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTY 581
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+ G C +G V A + ++ D V Y L +G++ A+ LFQ M
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G PD CII+ L K++ +A + EM +G P V TY +L++ LC ++
Sbjct: 642 QGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701
Query: 381 VYEYLDEMEQKN---GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVI 437
+ + M + GS + + + K+LK + + + R + + ++
Sbjct: 702 AFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLF 761
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
L + E K + +EM G P ++T ++ GL
Sbjct: 762 DGLVRSGKTE-KAQELLQEMAAGGSPPHAATFTAILDGL 799
>gi|413932621|gb|AFW67172.1| PHD finger protein [Zea mays]
Length = 1166
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 193/413 (46%), Gaps = 34/413 (8%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
++KT + S G+ AL+ LT L+ +V++R R++ + A+ FF W S++ Y+
Sbjct: 446 VIKTGTESNAGK--AALDALGAELTTPLVADVLHRLRYEEKLAFRFFAWASQQDGYNHEP 503
Query: 157 NVFNAILDVLG----RARRFVELIQVFDEMPDLVNEKTYGI----------LLNRYAAAH 202
+N I+D+L ++R+F L V D M K +G +L Y H
Sbjct: 504 TTYNDIIDILSGTRYKSRQFGVLCNVLDHM------KRHGSRSVPVEDLLEILRAYTEKH 557
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI 262
+ RR + A LL C+ V+ AE F K + + +T +
Sbjct: 558 LTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYST 617
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+ GWC + +A + +++I+ K P+S TY + + G + A LF+ M +G
Sbjct: 618 LFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIISFCSAGLVSEARELFEFMRTEG 677
Query: 323 ---RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
P T + +I AL R+ E E+L +M++ GC+P+VTTY LI+ +C + +++
Sbjct: 678 LTISSPTAKTYSIMIVALAKADRMEECFELLSDMRSCGCMPDVTTYKDLIEGMCLVGKLD 737
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILK 439
Y LDEM + P +I + +K ++ + ERM C+ S TYN+++
Sbjct: 738 AAYRVLDEMGRAG---FPPDIVTH------RKADDALELCERMIEAHCEPSVHTYNMMMM 788
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
++ + EM+K+ +Y +MI+GL+D G E A + E+
Sbjct: 789 MFFEMGEAHRALDICLEMDKRRCQRAIDTYEIMIYGLFDCGETEYATALLDEV 841
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 9/182 (4%)
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+ N ++DA C + EA V +K R L N TY++L C+ + + +
Sbjct: 576 PETDALNVLLDAFCKCGMVKEAEAVFGRVK-RKLLGNAETYSTLFFGWCRARDPKKAMKV 634
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT---YNVIL 438
L+EM Q + P T+ + S E + E M G +S+ T Y++++
Sbjct: 635 LEEMIQMKHT--PESFTYVAAIISFCSAGLVSEARELFEFMRTEGLTISSPTAKTYSIMI 692
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D ++ +M G PD +Y +I G+ G+L+ A EM G
Sbjct: 693 VALAKADRMEECFELLSDMRSCGCMPDVTTYKDLIEGMCLVGKLDAAYRVLDEMGRAGFP 752
Query: 499 PE 500
P+
Sbjct: 753 PD 754
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 168/358 (46%), Gaps = 15/358 (4%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L ARR V EMP + TY L+ A+ V D + D+
Sbjct: 16 LDAARRLVA------EMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVT 69
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ LL C+ + A + +++ DI T N+++NG C G V +A F K++
Sbjct: 70 YTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 129
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
CEP++V+Y + L + A L M +KG P+VVT N +I LC K +
Sbjct: 130 SYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVE 189
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
ALEVL ++ GC PN +YN L+ CK K+M+ +LD M + C P+ +++N
Sbjct: 190 PALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR--GCYPDIVSYNT 247
Query: 405 LLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
LL +L + EV +E +++ GC +YN ++ + EM KG
Sbjct: 248 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 307
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
+ PD +Y+ + GL + R+EDA+ F +++ G+ P +L N + + L +R E
Sbjct: 308 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT---VLYNAIILGLCKRRE 362
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 7/278 (2%)
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
A+ ++ C ++ A E D T N ++ G C G A +++
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEMPVE--PDAYTYNTLIRGLCGRGRTANALAVLDEML 59
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+ +C PD VTY + A K+ A++L M +KG PD+VT N +++ +C + R+
Sbjct: 60 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A+E L+ + + GC PN +YN ++K LC +R E E + EM QK C PN +TFN
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK--GCPPNVVTFNM 177
Query: 405 LLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ L + E VLE++ + GC ++ +YN +L + DK + M +G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
PD SY ++ L G ++ A+ H+++ KG P
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP 275
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 126/243 (51%), Gaps = 8/243 (3%)
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N ++ G+C G + A+R ++ EPD+ TY T + L +G+ AL + M
Sbjct: 4 NAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 60
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+ PDVVT +++A C + +A+++L EM+++GC P++ TYN ++ +C+ R++
Sbjct: 61 RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 120
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
E+L + C PN +++N +LK L ++ E+ ++ M + GC + T+N++
Sbjct: 121 AIEFLKNLPSY--GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + E++ K G P+ SY ++H + +++ A+++ M +G
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238
Query: 498 VPE 500
P+
Sbjct: 239 YPD 241
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 171/354 (48%), Gaps = 25/354 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +L+ + + + +++ DEM PD+V TY +++N V++A
Sbjct: 65 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIV---TYNVVVNGICQEGRVDDA 121
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNG 266
I +G + ++ +L LC + E AE E + ++ T N++++
Sbjct: 122 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 181
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G V A + I K C P+S++Y ++A K+ K+ A+ M +G PD
Sbjct: 182 LCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPD 241
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+V+ N ++ ALC + A+E+L ++K++GC P + +YN++I L K + + E L+
Sbjct: 242 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN 301
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN-VILKLYV 442
EM K P+ IT++ + L + E+ +++ G + +T YN +IL L
Sbjct: 302 EMVSKGLQ--PDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL-- 357
Query: 443 NWDCEDKVRHT----WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
C+ + H+ + M G P++ +YT++I GL +G +++A E+
Sbjct: 358 ---CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 5/262 (1%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
WE A + ++G P FN ++ L R ++V +++P N +Y
Sbjct: 153 WEDAEELMGEMGQKG-CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 211
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
LL+ + +++A+ D G D+ ++ LL LCR V+VA K++
Sbjct: 212 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 271
Query: 253 FGYDIK-TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ + N +++G G EA +++ +PD +TY+T L ++ ++ A
Sbjct: 272 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 331
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+R F + + G +P+ V N II LC ++ A+++ M GC+PN +TY LI+
Sbjct: 332 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 391
Query: 372 LCKIKRMETVYEYLDEMEQKNG 393
L ++ + LDE+ + G
Sbjct: 392 LAYEGLIKEARDLLDELCSRAG 413
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 179/378 (47%), Gaps = 22/378 (5%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARR------FVELIQVFDEMPDLVNEKTYG 192
A FF W G ++ + +L++LGRAR F+ I+ + ++ +
Sbjct: 102 ALQFFNWAPELG-FTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFN 160
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
L+ Y A + +E++ VF+ K G + F +LLL L + +A++ F+ +
Sbjct: 161 SLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLST 220
Query: 253 FGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+G D T NI++ G+C V E RF+K++ + KC+PD VTY T V+ L + GK+
Sbjct: 221 YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNI 280
Query: 311 ALRLFQAMWEKGRK--PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A + M +K PDVVT ++ C K I EAL V EM ++G PN TYN+L
Sbjct: 281 AHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTL 340
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERN 425
IK LC++++++ + + E G +P+ T N L+ + + V E+M
Sbjct: 341 IKGLCEVQKIDKIKQIF-EGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVL 399
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK-------GMGPDQRSYTVMIHGLYD 478
+ + TY+V+++ ++ ++E+ +K G P +Y M L
Sbjct: 400 NVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCR 459
Query: 479 KGRLEDALSYFHEMRLKG 496
G+ A F ++ +G
Sbjct: 460 NGKTAKAERVFRQLMKRG 477
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 146/326 (44%), Gaps = 11/326 (3%)
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKT----MN 261
+A+ F+ E G + ++ +L L R +++ VA F S K +K N
Sbjct: 101 KALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFN 160
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++ + G E+ + + + P VT+ + + L K+G+ A +F M
Sbjct: 161 SLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLST 220
Query: 322 -GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G PD T N +I C + E +EM C P++ TYN+L+ LC+ ++
Sbjct: 221 YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNI 280
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
+ ++ M +K+ + P+ +T+ L++ + +E V E M G K + TYN +
Sbjct: 281 AHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTL 340
Query: 438 LKLYVNWDCEDKVRHTWE-EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+K DK++ +E + G PD + +++ + G L DAL F +M +
Sbjct: 341 IKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLN 400
Query: 497 MVPEPRT-GILVNDMNIKLK-ERGEQ 520
+ P+ T +L+ ++ + ER EQ
Sbjct: 401 VRPDSATYSVLIRNLCQRGNFERAEQ 426
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 132/324 (40%), Gaps = 57/324 (17%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--------PDLVNE 188
+ + FFK +SR P +N ++D L RA + V + M PD+V
Sbjct: 244 DEGFRFFKEMSR-FKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVV-- 300
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY L+ Y H ++EA+ VF+ G + + L+ LC + ++ + FE
Sbjct: 301 -TYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEG 359
Query: 249 EKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
G+ D T+N ++N C GN+ +A ++ ++ PDS TY+ + L ++G
Sbjct: 360 ALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRG 419
Query: 307 KLGTALRLFQAMWEK-------GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC- 358
A +LF + EK G P V + + LC + +A V R++ RG
Sbjct: 420 NFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ 479
Query: 359 ---------------------------------LPNVTTYNSLIKHLCKIKRMETVYEYL 385
+P++ TY SLI L + Y+ L
Sbjct: 480 DPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTL 539
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL 409
++M + S +P TF+ +L L
Sbjct: 540 EKMIK--SSHVPETSTFHSILARL 561
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 10/201 (4%)
Query: 150 GDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEE 206
G + P + N +++ A + ++VF++M L + TY +L+ E
Sbjct: 364 GGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFER 423
Query: 207 AIGVFDR--RKEFGELDD-----LSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKT 259
A +FD KE DD ++A++++ +LCR AE F D +
Sbjct: 424 AEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLS 483
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
I++ G C G +++ PD TY + ++ L +KG+ A + + M
Sbjct: 484 FKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMI 543
Query: 320 EKGRKPDVVTCNCIIDALCFK 340
+ P+ T + I+ L K
Sbjct: 544 KSSHVPETSTFHSILARLLAK 564
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 195/417 (46%), Gaps = 24/417 (5%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVS--REGDYSPGSNVFNAILDVL 166
IE AL++ ++ D +V + + D + A+ F+ +S R G + + NA+LDV
Sbjct: 72 IEAALDRLRREISTDAVVKIFQCLK-DADLAWELFQCLSSPRFG-FQHSVHTGNALLDVF 129
Query: 167 GRARRFVE--------LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKE-F 217
R +R E L +F PD+ +T+ +L+ Y A EEA V +E F
Sbjct: 130 ARTKRHREAGNLLKNELATIFR--PDV---ETWNVLITGYCLAREPEEAFAVIREMEEDF 184
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
G L +L LC+ V A FE+ + T +I++NG G + +A
Sbjct: 185 GVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAH 244
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
++ + C D TY VN L K K+ A+ L + + G P + T N +++ L
Sbjct: 245 SLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGL 304
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C R+ EA+++LR++ + GC P+V TY SLI L K KR Y+ EM + G L
Sbjct: 305 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASR-GLAL- 362
Query: 398 NEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+ + + L++ L + ++P V + M +GC T + ++ +
Sbjct: 363 DTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF 422
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
+ ME +G+ P++ Y+ +IHGL +++ AL +M+ P+ T IL++ +
Sbjct: 423 KSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 479
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 168/355 (47%), Gaps = 22/355 (6%)
Query: 157 NVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
+ + AI++ L + ++ E + + +++ P + TY LLN +EEAI +
Sbjct: 260 HTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIA---TYNALLNGLCKMGRLEEAIDL 316
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCV 269
+ + G D+ + +L+ L + K E + F E D ++ G
Sbjct: 317 LRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQ 376
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + +A +K + C PD VT +T ++ L+K G++G A+R+F++M +G P+ V
Sbjct: 377 TGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVV 436
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ +I LC +++ ALE+L +MK C P+ TYN LI LCK +E + DEM
Sbjct: 437 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 496
Query: 390 QKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ C P+ T+N L+ L K + VL+ M + S+ + + C
Sbjct: 497 E--AGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGC 554
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ EME+ G+ Q ++ H L R+++A+S F+ +R +GM P P
Sbjct: 555 -----MLFHEMERSGVANSQTRTRLIFH-LCKANRVDEAVSLFNAIRKEGM-PHP 602
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMK-NRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+PDV T N +I C + EA V+REM+ + G P++ T+N ++ LCK + V
Sbjct: 151 RPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGK---VL 207
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILK 439
+D E S + TF+ L+ L K + + + NGC + TY I
Sbjct: 208 AAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAI-- 265
Query: 440 LYVNWDCEDK-VRHTWEEMEK---KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
VNW ++K ++ MEK G P +Y +++GL GRLE+A+ ++
Sbjct: 266 --VNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 323
Query: 496 GMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGL 532
G P+ T + D K K E K ++ S GL
Sbjct: 324 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGL 360
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 125/324 (38%), Gaps = 50/324 (15%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A + +K ++ G P + ++D L +A R +++F M NE Y L+
Sbjct: 383 ASSVYKTMTSHG-CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 441
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+ A ++ A+ + + K+ D + L+ LC+ VE A FF+ E E G
Sbjct: 442 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD-EMLEAGC 500
Query: 256 --DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
D+ T NI+++G C GN A D+ S+ Y++ V+ L K GKL
Sbjct: 501 KPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR-----FVYSSLVDGLCKSGKLEGGCM 555
Query: 314 LFQAMWEKG------------------------------RK---PDVVTCNCIIDALCFK 340
LF M G RK P N II AL
Sbjct: 556 LFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKS 615
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
++ E V +EM R P+ TYN+L+ + RM+ + Y EM + G P I
Sbjct: 616 GKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGR-GYVPPVSI 673
Query: 401 TFNYL---LKSLKKPEEVPWVLER 421
LK + P P R
Sbjct: 674 LHKLADDRLKDMPGPASRPCSSSR 697
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 98/227 (43%), Gaps = 7/227 (3%)
Query: 101 CSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFN 160
C++ +++KA + T+T +++++ + + D EAA FF + G P +N
Sbjct: 452 CALEMLAQMKKAFCTPD-TITYNILIDGLCK-SGDVEAARAFFDEMLEAG-CKPDVYTYN 508
Query: 161 AILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
++ L +A V D+M + Y L++ + +E +F + G
Sbjct: 509 ILISGLCKAGNTDAACGVLDDMSS--SRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVA 566
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
+ + + L+ LC+ V+ A + F + + E N I++ G V E + +
Sbjct: 567 NSQTRTR-LIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVY 625
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
+++ + +PD VTY +N + ++ A + M +G P V
Sbjct: 626 QEMTR-WWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPV 671
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 200/406 (49%), Gaps = 20/406 (4%)
Query: 108 EIEKALNQCELTL---TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILD 164
E+ +A++QC + + ++++ R + E A F+K + + G +P F+ ++
Sbjct: 248 EVFRAMDQCSVAPDVRSFNILIGGFCRVG-EVEEAMKFYKEMQQRG-VTPDVVSFSCLIG 305
Query: 165 V------LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
+ + A ++ ++ +PD V Y +++ + A + EA+ V D G
Sbjct: 306 LFSTRGKMDHAAAYLREMKGLGLVPDGV---IYTMVIGGFCRAGSMSEALRVRDEMVGLG 362
Query: 219 ELDDLSAFQNLLLWLCR-YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
L D+ + LL LC+ ++ ++ E E ++ D+ T +++G+C GN +A
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKAL 422
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+ + ++ + PD V Y + ++ + +KG L A L+ M + P+ VT + +ID+
Sbjct: 423 QLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSH 482
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C K ++ EA L EM ++G LPN+ TYNS+IK C+ ++ ++L +M Q N LP
Sbjct: 483 CEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDN--ILP 540
Query: 398 NEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+ ITFN L+ K E + V ME+ + TYN+I+ + ++ +
Sbjct: 541 DLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVF 600
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++M G+ PD+ +Y +I+G G ++A EM +G P+
Sbjct: 601 KKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 159/321 (49%), Gaps = 9/321 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V T+ +L++ A V+ AI + D G + F ++L LC+++ + A
Sbjct: 190 PDVV---THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKA 246
Query: 243 ETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ F + ++ D+++ NI++ G+C +G V EA +F+K++ + PD V+++ +
Sbjct: 247 KEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGL 306
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+ +GK+ A + M G PD V +I C + EAL V EM GCLP+
Sbjct: 307 FSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPD 366
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWV 418
V TYN+L+ LCK R+ E L+EM+++ P+ TF L+ + E+ +
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEELLNEMKER--GVTPDLCTFTTLIHGYCRDGNFEKALQL 424
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+ + + YN ++ K W++M + + P+ +Y+++I +
Sbjct: 425 FDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCE 484
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
KG++E+A + EM KG +P
Sbjct: 485 KGQVEEAFGFLDEMVSKGNLP 505
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 195/430 (45%), Gaps = 54/430 (12%)
Query: 119 TLTDDLIVNVINRYRF---DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVEL 175
D + NV+ RF D +AA ++ +G PG FN++L L + RRF +
Sbjct: 188 VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKG-LKPGIVTFNSVLKGLCKHRRFDKA 246
Query: 176 IQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL 229
+VF M PD+ +++ IL+ + VEEA+ + ++ G D+ +F L
Sbjct: 247 KEVFRAMDQCSVAPDV---RSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCL 303
Query: 230 L-LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
+ L+ R K A E + D +++ G+C G++ EA R +++ C
Sbjct: 304 IGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGC 363
Query: 289 EPDSVTYATFVNALTKK-----------------------------------GKLGTALR 313
PD VTY T +N L K+ G AL+
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQ 423
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
LF + + +PDVV N +ID +C K + +A E+ +M R PN TY+ LI C
Sbjct: 424 LFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHC 483
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMS 430
+ ++E + +LDEM K LPN +T+N ++K + V L++M ++
Sbjct: 484 EKGQVEEAFGFLDEMVSKGN--LPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
T+N ++ Y+ + + + MEK+ + PD +Y ++I+G ++G +E+A F
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFK 601
Query: 491 EMRLKGMVPE 500
+M G+ P+
Sbjct: 602 KMGASGIEPD 611
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 6/271 (2%)
Query: 234 CRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
C+ + A+T E EK D+ T N++++ G+V A + +P
Sbjct: 168 CKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGI 227
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
VT+ + + L K + A +F+AM + PDV + N +I C + EA++ +E
Sbjct: 228 VTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKE 287
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
M+ RG P+V +++ LI +M+ YL EM K +P+ + + ++ +
Sbjct: 288 MQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREM--KGLGLVPDGVIYTMVIGGFCRA 345
Query: 413 ---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
E V + M GC TYN +L EM+++G+ PD ++
Sbjct: 346 GSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTF 405
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
T +IHG G E AL F + + + P+
Sbjct: 406 TTLIHGYCRDGNFEKALQLFDTLLHQRLRPD 436
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 175/365 (47%), Gaps = 15/365 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + E + + D M P+LV TYG+++N
Sbjct: 145 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV---TYGVVVNGLCKRG 201
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
+ A+ + ++ + D+ F ++ LC+Y+HV+ A F E E ++ T +
Sbjct: 202 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 261
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ C G +A + D+I+ K P+ VT+ ++A K+GK A +L+ M ++
Sbjct: 262 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 321
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
PD+ T N +++ C R+ +A ++ M ++ C P+V TYN+LIK CK KR+E
Sbjct: 322 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 381
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
E EM + + + +T+ L++ L + V ++M +G TY+++L
Sbjct: 382 TELFREMSHR--GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 439
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
N +K ++ M+K + D YT MI G+ G+++D F + LKG+
Sbjct: 440 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 499
Query: 499 PEPRT 503
P T
Sbjct: 500 PNVVT 504
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 168/355 (47%), Gaps = 15/355 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
FN +L + + ++F +I + ++M L TY IL+N + + A+ + +
Sbjct: 50 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 109
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G + +LL C K + A + + E GY D T +++G +
Sbjct: 110 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVD-QMVEMGYRPDTITFTTLIHGLFLHNKA 168
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA +++ C+P+ VTY VN L K+G AL L M + DVV N I
Sbjct: 169 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 228
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
ID+LC + + +AL + +EM+ +G PNV TY+SLI LC R + L +M +K
Sbjct: 229 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 288
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWV-LERMERNGCKMSTD----TYNVILKLYVNWDCED 448
+ PN +TFN L+ + K E +V E++ + K S D TYN ++ + D D
Sbjct: 289 N--PNLVTFNALIDAFVK--EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 344
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K + +E M K PD +Y +I G R+ED F EM +G+V + T
Sbjct: 345 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 399
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 126/263 (47%), Gaps = 12/263 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P FNA++D + +FVE +++D+M PD+ TY L+N + +++
Sbjct: 289 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF---TYNSLVNGFCMHDRLDK 345
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F+ D+ + L+ C+ K VE E F E D T ++
Sbjct: 346 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 405
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G+ A++ +K ++ PD +TY+ ++ L GKL AL +F M + K
Sbjct: 406 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 465
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ +I+ +C ++ + ++ + +G PNV TYN++I LC + ++ Y L
Sbjct: 466 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 525
Query: 386 DEMEQKNGSCLPNEITFNYLLKS 408
+M++ LPN T+N L+++
Sbjct: 526 KKMKEDGP--LPNSGTYNTLIRA 546
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 136/301 (45%), Gaps = 6/301 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+++AIG+F + L + F LL + + K +V + E ++ E + + T NI
Sbjct: 28 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++N +C + A ++K EP VT ++ +N ++ A+ L M E G
Sbjct: 88 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+PD +T +I L + EA+ ++ M RGC PN+ TY ++ LCK +
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILK 439
L++ME + + FN ++ SL K V L + ME G + + TY+ ++
Sbjct: 208 NLLNKMEAAKIE--ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 265
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++ +M +K + P+ ++ +I +G+ +A + +M + + P
Sbjct: 266 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 325
Query: 500 E 500
+
Sbjct: 326 D 326
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 91/233 (39%), Gaps = 36/233 (15%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
KL A+ LF M + P +V N ++ A+ K+ + + +M+ + + TYN
Sbjct: 27 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQ-------------KNGSC------------------ 395
LI C+ ++ L +M + NG C
Sbjct: 87 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146
Query: 396 --LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
P+ ITF L+ L K E +++RM + GC+ + TY V++ D
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +ME + D + +I L ++DAL+ F EM KG+ P T
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 259
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 163/369 (44%), Gaps = 15/369 (4%)
Query: 164 DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
D L A R VE E PD+ L+ +A V + G D+
Sbjct: 53 DDLAEAARLVETSSSRGEAPDVY---LCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDV 109
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
A+ L+ CRY ++ A S D T I+ G C G V +A D+
Sbjct: 110 FAYNTLVAGYCRYGRLDAARRLIASMP--VPPDAYTYTPIIRGLCDRGRVGDALALLDDM 167
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
++ C+P VTY + A+ K G A+ + M KG P++VT N II+ +C + R+
Sbjct: 168 LQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRV 227
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
+A E+L + + G P++ +Y +++K LC +R + V EM K C+PNE+TF+
Sbjct: 228 DDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK--CVPNEVTFD 285
Query: 404 YLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
L++ + E VL++M ++GC +T N+++ D M
Sbjct: 286 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 345
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG-- 518
G PD SYT ++ GL GR E A EM K P T N L ++G
Sbjct: 346 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVT---FNTFICILCQKGLI 402
Query: 519 EQGKKVIKL 527
EQ K+I+L
Sbjct: 403 EQAIKLIEL 411
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 184/382 (48%), Gaps = 19/382 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAI 208
+ P + +L L ARR+ ++ +F EM D + NE T+ +L+ + MVE AI
Sbjct: 242 FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAI 301
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN--IILNG 266
V + + G + + ++ +C+ V+ A F + +G + T++ +L G
Sbjct: 302 QVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNN-MGMYGCNPDTISYTTVLRG 360
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G AK ++++ C P+ VT+ TF+ L +KG + A++L + M E G
Sbjct: 361 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG 420
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+VT N ++ C + R+ ALE+ N C PN TY +L+ LC +R++ E L
Sbjct: 421 IVTYNALVHGFCVQGRVDSALELF---NNLPCEPNTITYTTLLTGLCHAERLDAAAELLA 477
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
M QK+ C N +TFN L+ + EE ++ +M +GC + T+N +L +
Sbjct: 478 GMIQKD--CPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLD-GIT 534
Query: 444 WDC-EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
DC ++ + KG+ D +Y+ ++ L + R E+A+ H ++ GM P+
Sbjct: 535 KDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGM--RPK 592
Query: 503 TGILVNDMNIKLKERGEQGKKV 524
G + N + L +R E + +
Sbjct: 593 VG-MYNKILFALCKRCETDQAI 613
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 164/389 (42%), Gaps = 53/389 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +L+ + ++ F E + V DEM P++V TY +++N V++A
Sbjct: 174 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIV---TYNVIINGMCREGRVDDA 230
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF------ESEKNEFGYDI---- 257
+ +R +G D+ ++ +L LC + + + F + NE +D+
Sbjct: 231 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 290
Query: 258 --------------------------KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
NI++N C G V +A F ++ C PD
Sbjct: 291 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+++Y T + L + G+ A L M K P+ VT N I LC K I +A++++
Sbjct: 351 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 410
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
M GC + TYN+L+ C R+++ E + N C PN IT+ LL L
Sbjct: 411 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN-----NLPCEPNTITYTTLLTGLCH 465
Query: 412 PEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
E + +L M + C ++ T+NV++ + ++ +M + G P+ +
Sbjct: 466 AERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLIT 525
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ ++ G+ E+AL H + KG+
Sbjct: 526 FNTLLDGITKDCNSEEALELLHGLVSKGV 554
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 138/298 (46%), Gaps = 13/298 (4%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYG 192
WE A + R+ + P FN + +L G + ++LI++ E V TY
Sbjct: 367 WEHAKELLPEMVRK-NCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYN 425
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KN 251
L++ + V+ A+ +F+ E + ++ + LL LC + ++ A +
Sbjct: 426 ALVHGFCVQGRVDSALELFNNLP--CEPNTIT-YTTLLTGLCHAERLDAAAELLAGMIQK 482
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ + T N++++ +C G V EA +++ C P+ +T+ T ++ +TK A
Sbjct: 483 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 542
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L L + KG D +T + ++D L + R EA+++L +++ G P V YN ++
Sbjct: 543 LELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFA 602
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
LCK + ++ M NG C+PNE T+ L++ L +E +VL + G
Sbjct: 603 LCKRCETDQAIDFFAYM-VSNG-CMPNESTYIILIEGLAHEGLLKEARYVLSELYAKG 658
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L + L A RL + +G PDV C +I LC + R +A VLR + G +
Sbjct: 49 LIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVD 108
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V YN+L+ C+ R++ + M P+ T+ +++ L + + +
Sbjct: 109 VFAYNTLVAGYCRYGRLDAARRLIASMPVP-----PDAYTYTPIIRGLCDRGRVGDALAL 163
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L+ M + GC+ S TY V+L+ + + +EM KG P+ +Y V+I+G+
Sbjct: 164 LDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR 223
Query: 479 KGRLEDALSYFHEMRLKGMVPE 500
+GR++DA + + G P+
Sbjct: 224 EGRVDDAKEILNRLSSYGFQPD 245
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 152/355 (42%), Gaps = 23/355 (6%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
TL + +I + + R D AY F + G +P + + +L L RA R+ ++
Sbjct: 317 TLCNIVINAICKQGRVD--DAYDFLNNMGMYG-CNPDTISYTTVLRGLCRAGRWEHAKEL 373
Query: 179 FDEM-----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
EM P NE T+ + ++E+AI + + E+G + + L+
Sbjct: 374 LPEMVRKNCPP--NEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGF 431
Query: 234 CRYKHVEVAETFFES---EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
C V+ A F + E N Y +L G C + A +I+ C
Sbjct: 432 CVQGRVDSALELFNNLPCEPNTITY-----TTLLTGLCHAERLDAAAELLAGMIQKDCPL 486
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
++VT+ V+ +KG + A+ L M E G P+++T N ++D + EALE+L
Sbjct: 487 NAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELL 546
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
+ ++G + TY+S++ L + R E + L ++ P +N +L +L
Sbjct: 547 HGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMR--PKVGMYNKILFALC 604
Query: 411 KPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
K E ++ M NGC + TY ++++ + + R+ E+ KG+
Sbjct: 605 KRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 659
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 181/369 (49%), Gaps = 21/369 (5%)
Query: 143 FKWVSREGDYS--PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNR 197
F+ ++ +G++ P +N IL L + E+ V+ E+ + N T+ ++N
Sbjct: 144 FRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNG 203
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF------ESEKN 251
Y V EA + + G D + +L+L CR K V+ A F ++N
Sbjct: 204 YCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRN 263
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
E Y N+I +G C G + EA + + D+ + C P TY + AL+ G+ A
Sbjct: 264 EVSYT----NLI-HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L LF M EKG +P+V T +ID LC + ++ EA ++L EM +G +P+V TYN+LI
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
CK ++ +E LD ME + SC PN T+N L+ L +K + +L +M
Sbjct: 379 YCKEGMIDDAFEILDLME--SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
S TYN ++ + + M + G+ PDQ +Y+V I L +GR+E+A +
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496
Query: 489 FHEMRLKGM 497
F ++ KG+
Sbjct: 497 FDSVKAKGV 505
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 193/452 (42%), Gaps = 56/452 (12%)
Query: 126 VNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL 185
V+ + + D + A +FF W++ + + ++++L++L RAR
Sbjct: 71 VSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLG------------ 118
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL---DDLSAFQNLLLWLCRYKHV-EV 241
V EK ++ + V + VF + GE L + +L+ L ++ + E+
Sbjct: 119 VAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEM 178
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS--------- 292
+ E N+ +I T N ++NG+C +GNV EA+ + I+++ PD+
Sbjct: 179 KTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILG 238
Query: 293 --------------------------VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
V+Y ++ L + G++ AL+LF M E P
Sbjct: 239 HCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPT 298
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V T +I AL R EAL + EMK +GC PNV TY LI LCK +M+ + L
Sbjct: 299 VRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLS 358
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM +K +P+ +T+N L+ K ++ +L+ ME N C +T TYN ++
Sbjct: 359 EMSEKG--LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K +M ++ + P +Y +IHG LE A M G+VP+ T
Sbjct: 417 KRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWT 476
Query: 504 GILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
+ D K E G + + G+K N
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 171/368 (46%), Gaps = 9/368 (2%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E + P + ++ L + R VE + +F+EM + N TY +L++ + ++
Sbjct: 292 EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMD 351
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
EA + E G + + + L+ C+ ++ A E E N G + +T N ++
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G C V++A +++ K P +TY + ++ K L +A RL M E G
Sbjct: 412 CGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD T + ID LC + R+ EA + +K +G N Y +LI CK+ +++ Y
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
L+ M N +CLPN T+N L++ L KK +E ++ +M G K + TY +++
Sbjct: 532 LERM--LNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEM 589
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ D + M G PD +YT +H + +G LE+ +M +G++P+
Sbjct: 590 LKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDL 649
Query: 502 RTGILVND 509
T ++ D
Sbjct: 650 VTYTVLID 657
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 158/362 (43%), Gaps = 15/362 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
+E P + + ++D L + + E ++ EM P +V TY L++ Y
Sbjct: 326 KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVV---TYNALIDGYCKE 382
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTM 260
M+++A + D + + + L+ LC+ + V A + + + T
Sbjct: 383 GMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITY 442
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N +++G C + ++ A R + ++ PD TY+ F++ L K+G++ A LF ++
Sbjct: 443 NSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKA 502
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KG K + V +ID C +I A +L M N CLPN TYN LI+ LCK K+M+
Sbjct: 503 KGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKE 562
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVI 437
+ +M P +T+ L+ + K + V M G + TY
Sbjct: 563 ASSLVAKMLTMGVK--PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
L Y + ++V +M ++G+ PD +YTV+I G G A + M G
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680
Query: 498 VP 499
P
Sbjct: 681 KP 682
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 156/370 (42%), Gaps = 12/370 (3%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTY 191
D E+AY ++ G P ++ +D L + R E +FD + NE Y
Sbjct: 454 DLESAYRLLSLMNENG-LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIY 512
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
L++ Y ++ A + +R L + + L+ LC+ K ++ A + ++
Sbjct: 513 TALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLV-AKML 571
Query: 252 EFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
G + T I++ G A + + ++ +PD TY F++A +G L
Sbjct: 572 TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+ M E+G PD+VT +ID A + L+ M + GC P++ + LI
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKM 429
K+L RM+ E E+ + S + N + + K+L+ E + E+M +GC +
Sbjct: 692 KNLSHENRMK---ETRSEIGIDSVSNV-NSVDIADVWKTLEY-EIALKLFEKMVEHGCTI 746
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
Y ++ + + ++ + M+++GM P + Y ++ G +A+
Sbjct: 747 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 806
Query: 490 HEMRLKGMVP 499
M G++P
Sbjct: 807 DAMVENGLLP 816
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 167/353 (47%), Gaps = 7/353 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N +++ L + +R VE ++F EM N T+ L++ + VEE G+
Sbjct: 162 PDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGL 221
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCV 269
+ ++ G D+ + L+ C +E E F E + ++ T + ++N C
Sbjct: 222 LEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCK 281
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
EA + + K PD V Y + L+K G+ A+++ M ++G +P+ VT
Sbjct: 282 KQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVT 341
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N II+ LC + R+ +AL +L M +G P+V TY++L+K LC + +++ + L+ +
Sbjct: 342 YNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLM 401
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
K P+ FN +++ L ++ V M G + TYN+++ Y++
Sbjct: 402 SKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGK 461
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
K W++ G+ P+ +YTV+I+GL L A F++ R G P
Sbjct: 462 LTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRP 514
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 151/344 (43%), Gaps = 9/344 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTY---GILLNRYAAAHMVEEAIGV 210
P + N ++D L +A+ + +I V +M + + L+ + A GV
Sbjct: 57 PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCV 269
+ G ++ F LL C+ A + F ++N D + N ++NG C
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ EAK +K++ +C+P+SVT++ ++ K G + L + M + G + DV
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ +I C K I E+ EM + PNV TY+ L+ LCK ++ + + LD M
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT 296
Query: 390 QKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
P+ + + L L K + VL+ M + G + + TYN I+
Sbjct: 297 --GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGR 354
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
D E M KKG PD +Y+ ++ GL G++++A+ +
Sbjct: 355 VDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLN 398
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 144/299 (48%), Gaps = 24/299 (8%)
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-------------DIKTMNIILNGWCVL 270
S ++ ++ C + E+F ++K F + ++ N++L G+C
Sbjct: 83 SKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQS 142
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G+ ++A + + ++ PD V+Y T +N L K +L A LF+ M KP+ VT
Sbjct: 143 GDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTF 202
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+ +ID C + E +L EM+ G +V Y++LI C +E E +EM +
Sbjct: 203 SALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLR 262
Query: 391 KNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTD--TYNVILK-LYVNW 444
KN + PN +T++ L+ +L K + E +L+ M GCK+ D Y V+ L N
Sbjct: 263 KNVT--PNVVTYSCLMNALCKKQKWKEAAQMLDTM--TGCKVRPDVVAYTVLADGLSKNG 318
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D ++ + M K+G P+ +Y +I+GL +GR++DAL M KG P+ T
Sbjct: 319 RASDAIK-VLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVT 376
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 158/335 (47%), Gaps = 17/335 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +NAI++ L + R + + + + M PD+V TY L+ ++EA
Sbjct: 337 PNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVV---TYSTLVKGLCGVGKIDEA 393
Query: 208 IGVFD--RRKEFGELDDLSAFQNLLLWLCRYKHVEVAE-TFFESEKNEFGYDIKTMNIIL 264
+ + + KEF D+ AF ++ LC+ + + A+ ++ + F +I T NI++
Sbjct: 394 VDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILI 453
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G+ G + +A WKD + S P++ TY +N L K L A LF G +
Sbjct: 454 DGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTR 513
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P V N ++ +LC + + +A + +EM+N P+V ++N +I K +E+ E
Sbjct: 514 PTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKEL 573
Query: 385 LDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
L EM + +P+ ITF+ L+ L + +E + ERM G ++ +LK Y
Sbjct: 574 LLEMLNM--NLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGY 631
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
+KV ++M K + D + + ++ L
Sbjct: 632 SLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACL 666
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 152/358 (42%), Gaps = 11/358 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P + + D L + R + I+V D M + N TY ++N V++A+G+
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGI 361
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE---SEKNEFGYDIKTMNIILNGW 267
+ + G+ D+ + L+ LC ++ A S++ D+ N+++
Sbjct: 362 LETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQEL 421
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C + AKR + +++ + VTY ++ GKL AL L++ + G P+
Sbjct: 422 CKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNA 481
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T +I+ LC + + A + + + G P V+ YN+L+ LC+ +E E
Sbjct: 482 ATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQE 541
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD---TYNVILKLYVNW 444
M N P+ ++FN ++ K +V E + T+++++ ++
Sbjct: 542 MRNANHD--PDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKL 599
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
D+ +E M G PD + ++ G KG+ E +S +M K +V + +
Sbjct: 600 GQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSK 657
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 176/379 (46%), Gaps = 20/379 (5%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D E F + R+ + +P ++ +++ L + +++ E Q+ D M PD+V
Sbjct: 249 DIERGKELFNEMLRK-NVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVV-- 305
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
Y +L + + +AI V D + GE + + ++ LC+ V+ A E+
Sbjct: 306 -AYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILET 364
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK---CEPDSVTYATFVNALTK 304
K D+ T + ++ G C +G + EA +++ SK +PD + + L K
Sbjct: 365 MAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL-NLLMSKEFHIKPDVFAFNLVIQELCK 423
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
+ +L A R++ M E+G ++VT N +ID ++ +ALE+ ++ + G PN T
Sbjct: 424 QRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAAT 483
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLER 421
Y LI LCK+ +M ++ + L ++ +G+ P +N L+ SL E+ + +
Sbjct: 484 YTVLINGLCKM-QMLSIAKGLFNKKRASGT-RPTVSEYNTLMASLCRESSVEQARNLFQE 541
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M ++N+I+ + + + EM + PD +++++I+ G+
Sbjct: 542 MRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQ 601
Query: 482 LEDALSYFHEMRLKGMVPE 500
L++A S + M G VP+
Sbjct: 602 LDEAASLYERMVSCGHVPD 620
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 136/293 (46%), Gaps = 8/293 (2%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM 182
+L++ + + R A ++ V R + +N ++D A + + ++++ +
Sbjct: 415 NLVIQELCKQRRLRHAKRVYYTMVER--GFPSNIVTYNILIDGYLSAGKLTKALELWKDA 472
Query: 183 PDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV 239
D N TY +L+N M+ A G+F++++ G +S + L+ LCR V
Sbjct: 473 VDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSV 532
Query: 240 EVAETFFESEKN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
E A F+ +N D+ + NII++G G+V AK +++ PD++T++
Sbjct: 533 EQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSIL 592
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
+N K G+L A L++ M G PD V + ++ K + + + +L++M ++
Sbjct: 593 INRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDV 652
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+ + ++++ LC + + + + L + Q + + I N LL L K
Sbjct: 653 VLDSKLTSTILACLCNMSKDVDIEKILPKFSQH--TSVGASIKCNELLMKLNK 703
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 168/390 (43%), Gaps = 51/390 (13%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + +N ++D L ++ FDEM PD+ TY IL++ + A +
Sbjct: 193 TPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVY---TYNILISGFCKAGNTDA 249
Query: 207 AIGVFDRRKEF-GELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIIL 264
A + G D+ + ++ WL + K +E A E N I T N +L
Sbjct: 250 ASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALL 309
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK------------------- 305
NG C +G + EA + I+ + C PD VTY + ++ L K+
Sbjct: 310 NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLA 369
Query: 306 ----------------GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
GK+ A +++ M G PDVVT + +ID L RI A+ +
Sbjct: 370 LDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 429
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+ M+ RG PN Y++LI LCK ++M+ E L +M K C P+ IT+N L+ L
Sbjct: 430 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM--KKAFCTPDTITYNILIDGL 487
Query: 410 KKPEEVPWV---LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K +V + M GCK TYN+++ + D +++M +
Sbjct: 488 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANV 547
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+Y +I GL + +L A YF M+ +G
Sbjct: 548 VTYGALISGLCKRRQLTKASLYFQHMKERG 577
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 150/323 (46%), Gaps = 15/323 (4%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFES 248
TY LLN +EEAI + + + G D+ + +L+ L + K E + F E
Sbjct: 23 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 82
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
D ++ G + +A +K + C PD VT +T ++ L+K G++
Sbjct: 83 ALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRI 142
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
G A+R+F++M +G P+ V + +I LC +++ ALE+L +MK C P+ TYN L
Sbjct: 143 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVL 202
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER---- 424
I LCK +E + DEM + C P+ T+N L+ K + +
Sbjct: 203 IDGLCKSGDVEAARAFFDEMLE--AGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTI 260
Query: 425 NGCKMSTDTYNVILKLYVNWDCED-KVRHTWEEMEK---KGMGPDQRSYTVMIHGLYDKG 480
NGC + TY I V+W ++ K+ MEK G P +Y +++GL G
Sbjct: 261 NGCTIDIHTYTAI----VDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMG 316
Query: 481 RLEDALSYFHEMRLKGMVPEPRT 503
RLE+A+ ++ G P+ T
Sbjct: 317 RLEEAIDLLRKIVDNGCTPDVVT 339
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 181/382 (47%), Gaps = 14/382 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A + +K ++ G P + ++D L +A R +++F M NE Y L+
Sbjct: 110 ASSVYKTMTSHG-CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 168
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+ A ++ A+ + + K+ D + L+ LC+ VE A FF+ E E G
Sbjct: 169 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFD-EMLEAGC 227
Query: 256 --DIKTMNIILNGWCVLGNVYEAKR-FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D+ T NI+++G+C GN A ++ + C D TY V+ L K K+ A+
Sbjct: 228 KPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAV 287
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L + + G P + T N +++ LC R+ EA+++LR++ + GC P+V TY SLI L
Sbjct: 288 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 347
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKM 429
K KR Y+ EM + G L + + + L++ L + ++P V + M +GC
Sbjct: 348 GKEKRSFEAYKLFKEMALR-GLAL-DTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVP 405
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
T + ++ ++ ME +G+ P++ Y+ +IHGL +++ AL
Sbjct: 406 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 465
Query: 490 HEMRLKGMVPEPRT-GILVNDM 510
+M+ P+ T IL++ +
Sbjct: 466 AQMKKAFCTPDTITYNILIDGL 487
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 170/401 (42%), Gaps = 52/401 (12%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTY 191
AA FK + G +P V++A++ L +AR+ +++ +M PD + TY
Sbjct: 144 AAVRIFKSMEARG-LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI---TY 199
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK- 250
+L++ + VE A FD E G D+ + L+ C+ + + A E
Sbjct: 200 NVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETT 259
Query: 251 -NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
N DI T I++ + EA + I + C P TY +N L K G+L
Sbjct: 260 INGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE 319
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR--------------------------- 342
A+ L + + + G PDVVT +ID L +KR
Sbjct: 320 EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALI 379
Query: 343 --------IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
IP+A V + M + GC+P+V T +++I L K R+ ME + +
Sbjct: 380 RELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA 439
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
PNE+ ++ L+ L K ++ LE +M++ C T TYN+++ + R
Sbjct: 440 --PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 497
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
++EM + G PD +Y ++I G G + A F +M
Sbjct: 498 AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 538
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 143/305 (46%), Gaps = 7/305 (2%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNI 262
+EEA+ + ++ G ++ + LL LC+ +E A + + N D+ T
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++G +EA + +K++ D+V Y + L + GK+ A +++ M G
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDVVT + +ID L RI A+ + + M+ RG PN Y++LI LCK ++M+
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILK 439
E L +M K C P+ IT+N L+ L K +V + M GCK TYN+++
Sbjct: 182 EMLAQM--KKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239
Query: 440 LYVNWDCEDKVRHTW-EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ D H+ +E G D +YT ++ L ++E+A++ ++ G
Sbjct: 240 GFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT 299
Query: 499 PEPRT 503
P T
Sbjct: 300 PTIAT 304
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
K+ A+ L + + G P + T N +++ LC R+ EA+++LR++ + GC P+V TY
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERME 423
SLI L K KR Y+ EM + G L + + + L++ L + ++P V + M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALR-GLAL-DTVCYTALIRELLQTGKIPQASSVYKTMT 118
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+GC T + ++ ++ ME +G+ P++ Y+ +IHGL +++
Sbjct: 119 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 178
Query: 484 DALSYFHEMRLKGMVPEPRT 503
AL +M+ P+ T
Sbjct: 179 CALEMLAQMKKAFCTPDTIT 198
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 11/226 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY FK ++ G + + + A++ L + + + V+ M PD+V T
Sbjct: 356 AYKLFKEMALRG-LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVV---TLS 411
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
+++ + A + A+ +F + G + + L+ LC+ + ++ A K
Sbjct: 412 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 471
Query: 253 FGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
F D T NI+++G C G+V A+ F+ +++++ C+PD TY ++ K G A
Sbjct: 472 FCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 531
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+F M +VVT +I LC ++++ +A + MK RG
Sbjct: 532 CGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 188/438 (42%), Gaps = 79/438 (18%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRY 198
FK + G Y G + F +++D F L +V D M +V EK + ++ Y
Sbjct: 46 IFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAY 105
Query: 199 AAAHMVEEAIGVFDRRK-EFGELDDLSAFQNLLLWLCR----YKHVEVAETFFESEKNEF 253
AH+ E+A+G+FDR EF + +F ++L + + Y+ +E ++
Sbjct: 106 GKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNI 165
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF--------------- 298
++ T N+++ C +G V +A + ++D+ SKC+PD TY T
Sbjct: 166 SPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVS 225
Query: 299 --------------------VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
+N L KKG L +L M+ KG P+ VT N +I LC
Sbjct: 226 LLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLC 285
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM------------------ET 380
K ++ +A+ +L M + C+PNV TY ++I L K R E
Sbjct: 286 LKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEY 345
Query: 381 VYEYLDEMEQKNGS---------------CLPNEITFNYLLKSL---KKPEEVPWVLERM 422
VY L K G C N I ++ ++ L KP+E VL M
Sbjct: 346 VYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEM 405
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
N CK + TY+ ++K + K W++M K ++ Y+V+IHGL G++
Sbjct: 406 TNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKV 465
Query: 483 EDALSYFHEMRLKGMVPE 500
++A+ + +M KG P+
Sbjct: 466 KEAMMVWAQMLGKGCKPD 483
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 141/316 (44%), Gaps = 34/316 (10%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
KG++EKA++ + ++ + NV+ + N ++
Sbjct: 287 KGKLEKAISLLDRMVSSKCVPNVVTY------------------------GTIINGLVK- 321
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRR--KEFGELDDL 223
GRA ++ + +E VNE Y L++ +EA+ +F KE EL+ +
Sbjct: 322 QGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKEC-ELNTI 380
Query: 224 SAFQNLLLWLCR-YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ ++ LCR K E E E N + T + ++ G+ GN ++A WKD
Sbjct: 381 -VYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKD 439
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ K + V Y+ ++ L K GK+ A+ ++ M KG KPDVV +I+ L
Sbjct: 440 MAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGL 499
Query: 343 IPEALEVLREM--KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
+ +AL++ EM + P+V TYN L+ LCK + + L+ M + C P+ +
Sbjct: 500 VEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDR--GCDPDLV 557
Query: 401 TFNYLLKSLKKPEEVP 416
T L++L++ + P
Sbjct: 558 TCIIFLRTLREKLDPP 573
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 125/294 (42%), Gaps = 7/294 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P +N ++ L + + I + D M + N TYG ++N +
Sbjct: 271 APNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGAR 330
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
V +E G + + L+ L + K E + F E E + + +++G C
Sbjct: 331 VLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLC 390
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G EA ++ ++C+P++ TY++ + + G A+ +++ M + + V
Sbjct: 391 RDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEV 450
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+ +I LC ++ EA+ V +M +GC P+V Y S+I L +E + +EM
Sbjct: 451 CYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEM 510
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILK 439
+ P+ +T+N LL +L K + +L M GC T + L+
Sbjct: 511 LCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLR 564
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 112/253 (44%), Gaps = 27/253 (10%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
V++A++D L R + E ++V EM + N TY L+ + A +AI ++
Sbjct: 381 VYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDM 440
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
+ + + L+ LC+ V E + + D+ ++NG G V
Sbjct: 441 AKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLV 500
Query: 274 YEAKRFWKDII--KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC- 330
+A + + +++ + +PD VTY +NAL K+ + A+ L +M ++G PD+VTC
Sbjct: 501 EDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCI 560
Query: 331 --------------------NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
+ ++ L ++R+ A +++ M + P +T+ +++
Sbjct: 561 IFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVE 620
Query: 371 HLCKIKRMETVYE 383
LC K+++ +
Sbjct: 621 DLCNPKKVQAAIQ 633
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 90/240 (37%), Gaps = 41/240 (17%)
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG---TALRLFQAM-WEKGRKPD 326
N+ + K K + + +CE V FV GK A+ LF M +E K
Sbjct: 71 ANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRT 130
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREM---KNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
V + N +++ + + ALE + K PNV T+N +IK +CK+ ++ +
Sbjct: 131 VKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQ 190
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+M C P+ T+ L+ L K + +
Sbjct: 191 MFRDMPVSK--CQPDVYTYCTLMDGLCKADRI---------------------------- 220
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ +EM+ G P ++ V+I+GL KG L M LKG P T
Sbjct: 221 ----DEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVT 276
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
T+N+++K D + +M PD +Y ++ GL R+++A+S EM
Sbjct: 171 TFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEM 230
Query: 493 RLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
++ G P P T +L+N L ++G+ + + ++ LKG A
Sbjct: 231 QIDGCFPSPVTFNVLING----LCKKGDLARVAKLVDNMFLKGCA 271
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 171/358 (47%), Gaps = 20/358 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + FN ++ L + R E ++ + M PD + TYG L+N V+ A
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD---DITYGYLMNGLCKIGRVDAA 341
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+F R + ++ F L+ + ++ A+ +G D+ T N ++
Sbjct: 342 KDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ G V A D+ C+P+ +Y V+ K GK+ A + M G KP
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ V NC+I A C + RIPEA+E+ REM +GC P+V T+NSLI LC++ ++ L
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 386 DEMEQKNGSCLPNEITFNYLLKS-LKKPE--EVPWVLERMERNGCKMSTDTYNVILKLYV 442
+M + + N +T+N L+ + L++ E E ++ M G + TYN ++K
Sbjct: 518 RDMISE--GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
DK R +E+M + G P S ++I+GL G +E+A+ + EM L+G P+
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 157/367 (42%), Gaps = 15/367 (4%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRY 198
F W + Y +V+ ++ LG F + ++ +M D + E + ++ Y
Sbjct: 97 LFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDY 156
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK--HVEVAETFFESEKNEFGYD 256
A + + + + N++L + H A F++ +
Sbjct: 157 DKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPT 216
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ T +++ +C + + A +D+ K C P+SV Y T +++L+K ++ AL+L +
Sbjct: 217 LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 276
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M+ G PD T N +I LC RI EA +++ M RG P+ TY L+ LCKI
Sbjct: 277 EMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIG 336
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN-GCKMSTD 432
R++ + + + P + FN L+ + ++ VL M + G
Sbjct: 337 RVDAAKDLFYRIPK------PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TYN ++ Y +M KG P+ SYT+++ G G++++A + +EM
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 493 RLKGMVP 499
G+ P
Sbjct: 451 SADGLKP 457
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 6/262 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM-PDLVNEKTYGI--LLNRYAAAHMVEEAIGV 210
P + ++D + + E V +EM D + T G L++ + H + EA+ +
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
F G D+ F +L+ LC ++ A +E + T N ++N +
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA++ +++ D +TY + + L + G++ A LF+ M G P ++
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
CN +I+ LC + EA+E +EM RG P++ T+NSLI LC+ R+E +++
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 390 QKNGSCLPNEITFNYLLKSLKK 411
+ P+ +TFN L+ L K
Sbjct: 662 AE--GIPPDTVTFNTLMSWLCK 681
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 40/275 (14%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP------------- 183
+ AY +S +G P + FN ++ + R E +++F EMP
Sbjct: 441 DEAYNVLNEMSADG-LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 184 -------------------DLVNEK------TYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
D+++E TY L+N + ++EA + + G
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAK 277
D + +L+ LCR V+ A + FE ++ + NI++NG C G V EA
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
F K+++ PD VT+ + +N L + G++ L +F+ + +G PD VT N ++ L
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
C + +A +L E G +PN T++ L++ +
Sbjct: 680 CKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
T+ V++K + + D +M K G P+ Y +IH L R+ +AL EM
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278
Query: 493 RLKGMVPEPRT 503
L G VP+ T
Sbjct: 279 FLMGCVPDAET 289
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 167/332 (50%), Gaps = 10/332 (3%)
Query: 172 FVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
F +++VF P V +K G ++ H AI +F + + G ++ F L+
Sbjct: 43 FNRMVRVFPPPPTSVFDKLLGAIVR---MGHY-PTAISLFTQLQSKGISPSIATFTILIN 98
Query: 232 WLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
H A + + K+ + ++ T N I+NG+C+ G +++A F ++++
Sbjct: 99 CYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLF 158
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D TY T +N L+K G++ AL L Q M + +P++V + +ID LC + +AL +
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
++ RG L + TYNSLI C + R + V + L +M ++N P++ TFN L+ +L
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD--PDDYTFNILIDALC 276
Query: 411 KPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
K E VL M + G K TYN +++ Y + + + R + M K+G+ PD
Sbjct: 277 KEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVL 336
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+Y V+I G +++A+ F E+ K +VP
Sbjct: 337 NYNVLIDGYCKTKMVDEAMVLFKELCNKNLVP 368
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 182/399 (45%), Gaps = 33/399 (8%)
Query: 107 GEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVL 166
G I KAL+ C+ L Y FD T +S+ G +
Sbjct: 139 GMIFKALDFCQNLLAQG--------YLFDQFTYGTLINGLSKNGQ--------------I 176
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
A ++ ++ P+LV Y L++ V +A+G+ + E G L D +
Sbjct: 177 KAALHLLQEMEKSSVQPNLV---MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTY 233
Query: 227 QNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
+L+ C EV + + + D T NI+++ C G + EA+ + K
Sbjct: 234 NSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSK 293
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+PD VTY + + + A LF M ++G +PDV+ N +ID C K + E
Sbjct: 294 RGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDE 353
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE-ITFNY 404
A+ + +E+ N+ +P + +YNSLI LC R+ V + LDEM +GS P + +T+N
Sbjct: 354 AMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM---HGSAQPPDVVTYNI 410
Query: 405 LLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ +L K E VL M + G K + TYN ++ Y + + + + M K G
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ PD +Y V+I+G +++A+ F EMR K ++P+
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 181/416 (43%), Gaps = 58/416 (13%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
W+ + RE + P FN ++D L + R +E V M PD+V
Sbjct: 246 WQEVTQLLTKMVRE-NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV--- 301
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY L+ Y + V EA +F+R + G D+ + L+ C+ K V+ A F+
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 250 KNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
N+ I + N +++G C G + K+ ++ S PD VTY ++AL K+G++
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRI 421
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI------------------------- 343
AL + M +KG KP++VT N ++D C + +
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVL 481
Query: 344 ----------PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
EA+ + +EM+++ +P++ +YNSLI LC + R+ V E LDEM
Sbjct: 482 INGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ 541
Query: 394 SCLPNEITFNYLLKSLKK--PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD----CE 447
S P+ IT+N LL + K P + L R G T + I+ + E
Sbjct: 542 S--PDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAE 599
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D ++H + G P+ ++YT++I+ L G +A+ +M P+ T
Sbjct: 600 DALKH----LLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAIT 651
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 104/271 (38%), Gaps = 40/271 (14%)
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C NV +A + +++ P + + + A+ + G TA+ LF + KG P +
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC-------------- 373
T +I+ + A +L + G PN+ T+N++I C
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 374 ---------------------KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
K +++ L EME+ S PN + ++ L+ L K
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKS--SVQPNLVMYSALIDGLCKD 208
Query: 413 EEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
V L ++ G + TYN ++ + +V +M ++ + PD ++
Sbjct: 209 GFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF 268
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++I L +GR+ +A M +G P+
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPD 299
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 175/365 (47%), Gaps = 15/365 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + E + + D M P+LV TYG+++N
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV---TYGVVVNGLCKRG 239
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
+ A+ + ++ + D+ F ++ LC+Y+HV+ A F E E ++ T +
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ C G +A + D+I+ K P+ VT+ ++A K+GK A +L+ M ++
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
PD+ T N +++ C R+ +A ++ M ++ C P+V TYN+LIK CK KR+E
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
E EM + + + +T+ L++ L + V ++M +G TY+++L
Sbjct: 420 TELFREMSHR--GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
N +K ++ M+K + D YT MI G+ G+++D F + LKG+
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 499 PEPRT 503
P T
Sbjct: 538 PNVVT 542
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 168/355 (47%), Gaps = 15/355 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
FN +L + + ++F +I + ++M L TY IL+N + + A+ + +
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G + +LL C K + A + + E GY D T +++G +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVD-QMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA +++ C+P+ VTY VN L K+G AL L M + DVV N I
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
ID+LC + + +AL + +EM+ +G PNV TY+SLI LC R + L +M +K
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWV-LERMERNGCKMSTD----TYNVILKLYVNWDCED 448
+ PN +TFN L+ + K E +V E++ + K S D TYN ++ + D D
Sbjct: 327 N--PNLVTFNALIDAFVK--EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K + +E M K PD +Y +I G R+ED F EM +G+V + T
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 126/263 (47%), Gaps = 12/263 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P FNA++D + +FVE +++D+M PD+ TY L+N + +++
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF---TYNSLVNGFCMHDRLDK 383
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F+ D+ + L+ C+ K VE E F E D T ++
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G+ A++ +K ++ PD +TY+ ++ L GKL AL +F M + K
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ +I+ +C ++ + ++ + +G PNV TYN++I LC + ++ Y L
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 386 DEMEQKNGSCLPNEITFNYLLKS 408
+M++ LPN T+N L+++
Sbjct: 564 KKMKEDGP--LPNSGTYNTLIRA 584
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 136/301 (45%), Gaps = 6/301 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+++AIG+F + L + F LL + + K +V + E ++ E + + T NI
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++N +C + A ++K EP VT ++ +N ++ A+ L M E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+PD +T +I L + EA+ ++ M RGC PN+ TY ++ LCK +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILK 439
L++ME + + FN ++ SL K V L + ME G + + TY+ ++
Sbjct: 246 NLLNKMEAAKIE--ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++ +M +K + P+ ++ +I +G+ +A + +M + + P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 500 E 500
+
Sbjct: 364 D 364
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 91/233 (39%), Gaps = 36/233 (15%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
KL A+ LF M + P +V N ++ A+ K+ + + +M+ + + TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQ-------------KNGSC------------------ 395
LI C+ ++ L +M + NG C
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 396 --LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
P+ ITF L+ L K E +++RM + GC+ + TY V++ D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +ME + D + +I L ++DAL+ F EM KG+ P T
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 175/400 (43%), Gaps = 45/400 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRY 198
A FK +S G P + + I+ L A+R E FDE D++ +Y ++
Sbjct: 318 ALELFKLLSSYG-CKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVI---SYTTVIKGL 373
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK 258
A + ++EA +F++ K G ++ A+ ++ L + +E FE +
Sbjct: 374 ADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTR 433
Query: 259 TM-NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T ++++G C + +A + ++ +++ C PD++TY T ++ +K K+ A +L
Sbjct: 434 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDV 493
Query: 318 MWEKGRKPDVVTCNCIIDALC-----------------------------------FKKR 342
M KG +P VT I+ C K R
Sbjct: 494 MLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR 553
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
EA +VL EM RGC P+V Y SLI L R+ D M +K C P+ +T+
Sbjct: 554 AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG--CAPDALTY 611
Query: 403 NYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
++++ K E +LE M ++G YN ++ YV + D+ ++ M
Sbjct: 612 GTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA 671
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
G+ P+ ++ V++HGL+ G+ + A S F EM K VP
Sbjct: 672 SGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVP 711
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 163/352 (46%), Gaps = 13/352 (3%)
Query: 158 VFNAILDV---LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
+N+++D LGR ++L+ E + + +TY IL+ ++ A+ +++A+ +F
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLL 325
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVY 274
+G + + + ++ L + +E A+ FF+ D+ + ++ G +
Sbjct: 326 SSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE-----ALDVISYTTVIKGLADSKRID 380
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA ++ + + C P+ V Y ++ L K G++ L+ F+ M P T +I
Sbjct: 381 EACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVI 440
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
D LC + +P+A +V +M +GC+P+ TY +LI K +M+ + LD M K
Sbjct: 441 DGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 500
Query: 395 CLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
P +T+ ++ K + E V+ +M GC+ + +L Y++ ++
Sbjct: 501 --PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 558
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
EM +G PD YT +I L+ GR+ +A F M KG P+ T
Sbjct: 559 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 610
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 163/338 (48%), Gaps = 8/338 (2%)
Query: 160 NAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGVFDRRKE 216
N +L+ L +AR+ + I++F EMP + E T Y +++ A+ ++EA F+ +
Sbjct: 24 NIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMID 83
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEA 276
G D+ AF L+ C+ +V F D+ +++G+C G++
Sbjct: 84 NGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTG 143
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
+ ++++ + C PD+ Y ++ L K G++ A LF+ M + G D VT +I+A
Sbjct: 144 FKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEA 203
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
L ++ EA E+ REM RG P + +SLI LCK +++ E + K +
Sbjct: 204 LSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVA-- 261
Query: 397 PNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
+ + +N L+ L + ++ +L +M TYN+++ + + D
Sbjct: 262 TSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALEL 321
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
++ + G P+ +YT +I GLYD R+E+A ++F E
Sbjct: 322 FKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE 359
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 159/375 (42%), Gaps = 22/375 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + + ++D +A + E ++ D M P V TYG +++ + M+ EA
Sbjct: 466 PDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAV---TYGSIVHGFCKLDMINEA 522
Query: 208 IGVFDRRKEFGELDDLSAFQNLL-LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNG 266
V + +E G L F +LL +L + + E + E D+ +++
Sbjct: 523 KEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDL 582
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
G V EA+ + +I+ C PD++TY T + +K G + A + + M + G PD
Sbjct: 583 LFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 642
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
N ++D +R+ +A V M G PN T+N L+ L K + + +
Sbjct: 643 CFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFK 702
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILKLYVN 443
EM +K+ P +++ L+ L K V + M G TY ++
Sbjct: 703 EMLEKD-EVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAK 761
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + E+M K G+ PD ++Y+ +I GL D ++ A F EM +G P
Sbjct: 762 AGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAP---- 817
Query: 504 GILVNDMNIKLKERG 518
N++ K+ RG
Sbjct: 818 ----NEVTYKVLRRG 828
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 141/345 (40%), Gaps = 45/345 (13%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
RE PG +F ++L R E QV EM PD++ Y L++ +
Sbjct: 530 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVI---LYTSLIDLLFST 586
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTM 260
V EA VFD E G D + ++ + +VE A E K+ G D
Sbjct: 587 GRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAY 646
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N +++G+ L V +A + ++ S +P++VT+ ++ L K GK A LF+ M E
Sbjct: 647 NSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLE 706
Query: 321 KGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
K P +V+ +ID L R+ EA +EM +RG +P TY SLI L K R+
Sbjct: 707 KDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIP 766
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILK 439
E ++E M + G Y+ ++
Sbjct: 767 ----------------------------------EAKKLVEDMVKLGVNPDVQAYSALIT 792
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
++ D ++EM K+G P++ +Y V+ G GR D
Sbjct: 793 GLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD 837
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
AL + M G PDVV CN +++ LC ++I +A+E+ EM + GC P + +YN++I
Sbjct: 4 ALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVIS 63
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK-M 429
L I +M+ Y++ + M + C P+ I F L+ K + P V + K
Sbjct: 64 GLASIDKMDEAYKFFNSM--IDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKRF 120
Query: 430 STDT--YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
D Y ++ Y D EEM G PD +Y V+I L GR+++A
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180
Query: 488 YFHEMRLKG 496
F MR G
Sbjct: 181 LFERMRKSG 189
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 6/233 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ NI+LNG C + +A + ++ CEP V+Y T ++ L K+ A + F
Sbjct: 19 DVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFF 78
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+M + G +PDV+ +I C K P+ +L + P+V Y S+I CK
Sbjct: 79 NSMIDNGCEPDVIAFTTLIHGFC-KAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKA 137
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTD 432
++T ++ L+EM C+P+ + L+ L K +E + ERM ++GC
Sbjct: 138 GDLDTGFKILEEM--LAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYV 195
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
T+ +++ N D+ + EM ++G P +I L G++++A
Sbjct: 196 TFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEA 248
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 6/228 (2%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA K++ + PD V +N L K K+ A+ LF M G +P +V+ N +I
Sbjct: 3 EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVI 62
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
L ++ EA + M + GC P+V + +LI CK + + + L++ ++
Sbjct: 63 SGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF-- 120
Query: 395 CLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
P+ + ++ K ++ +LE M GC Y V++ D+
Sbjct: 121 -RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+E M K G D ++ +I L + G+L++A + EM +G P
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEP 227
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 180/400 (45%), Gaps = 58/400 (14%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM--------PDLVNEKTYGILLNRYAAAHMVE 205
P +N +L+ L + R+ E ++ +M PDLV TY LL+ Y A VE
Sbjct: 43 PNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLV---TYSTLLSGYCKAGKVE 99
Query: 206 EAIGVFDRRKEFGELDD-----------------------------------LSAFQNLL 230
E+ + G D L F L+
Sbjct: 100 ESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLI 159
Query: 231 LWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
CR K++E+A++ ++ + D+ T N +++G C G + EA++ + + S C
Sbjct: 160 SGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCA 219
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD V Y++FV L K GK+ A ++ + M + P+VVT N I+D LC +I ALE+
Sbjct: 220 PDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEM 279
Query: 350 LREMKNR-GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ +M + GC NV Y++++ LCK+ R + ++ M + C P+ +T++ L+
Sbjct: 280 MEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG--CRPDVVTYSSLVNG 337
Query: 409 LKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG-- 463
L K EE + M GCK + TY ++ + + EEM G G
Sbjct: 338 LCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGD 397
Query: 464 ---PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
P +Y +I GL GR++DAL +F MR +G P+
Sbjct: 398 HCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPD 437
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 160/359 (44%), Gaps = 44/359 (12%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N T+ L+N ++ + + + G ++ ++ LL LC+ + AE
Sbjct: 9 NSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELV 68
Query: 247 ESEKNEFGY---DIKTMNIILNGWCVLGNVYEAKRFWKDII------------------- 284
+ G D+ T + +L+G+C G V E++ K++I
Sbjct: 69 RDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLC 128
Query: 285 ----------------KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
++ C P +T+ T ++ ++ L A L Q M G K DVV
Sbjct: 129 KSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVV 188
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N ++D LC R+ EA ++L MK GC P+V Y+S + LCK ++ ++ L++M
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQM 248
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER----NGCKMSTDTYNVILKLYVNW 444
+ PN +T+N +L L K ++ LE ME+ +GC ++ Y+ ++
Sbjct: 249 RDSDHD--PNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ R E M + G PD +Y+ +++GL G++E+A+ EM ++G P T
Sbjct: 307 GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVT 365
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 126/258 (48%), Gaps = 8/258 (3%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY L++ A ++EA + +R K G D+ A+ + + LC+ V A E
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQM 248
Query: 250 KN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGK 307
++ + ++ T N IL+G C G + A + + S C + V Y+T V+ L K G+
Sbjct: 249 RDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
A + +AM G +PDVVT + +++ LC +I EA+E +REM GC PN TY S
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGS---CLPNEITFNYLLKSLKKPEEVPWVL---ER 421
L+ LC R+ ++EM G C P+ T+N L+ L K + L +R
Sbjct: 369 LVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQR 428
Query: 422 MERNGCKMSTDTYNVILK 439
M GC +Y+ I++
Sbjct: 429 MRSQGCDPDGVSYSTIVE 446
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 38/247 (15%)
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
++ C P+SVT+ VN +K+G+ G RL + M +G +P+VV+ N +++ LC +R
Sbjct: 3 RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWH 62
Query: 345 EALEVLREMKNRG--CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN---------- 392
EA E++R+M +RG P++ TY++L+ CK ++E E L E+ +
Sbjct: 63 EAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122
Query: 393 -----------------------GSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
C P ITFN L+ K E +L+ M +G
Sbjct: 123 VMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASG 182
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
K TYN ++ + E M+ G PD +Y+ ++GL G++ +A
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAH 242
Query: 487 SYFHEMR 493
+MR
Sbjct: 243 QVLEQMR 249
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 51/267 (19%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N ++D L +A R E Q+ + M PD+V Y + + V A V +
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVV---AYSSFVYGLCKSGKVLNAHQVLE 246
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDIKTMNIILNGWCVL 270
+ ++ ++ + +L LC+ ++ A E + + G ++ + +++G C L
Sbjct: 247 QMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT- 329
G EA+ + + ++ C PD VTY++ VN L K GK+ A+ + M +G KP+ VT
Sbjct: 307 GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTY 366
Query: 330 -------CNC--------------------------------IIDALCFKKRIPEALEVL 350
C+C +I LC RI +AL+
Sbjct: 367 CSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFF 426
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKR 377
+ M+++GC P+ +Y+++++ L + R
Sbjct: 427 QRMRSQGCDPDGVSYSTIVEGLARSGR 453
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL----VNEKTYGILLNRYAAAHM 203
R+ D+ P +N ILD L ++ + +++ ++M +N Y +++
Sbjct: 249 RDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNI 262
+EA V + G D+ + +L+ LC+ +E A E E + T
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSK-----CEPDSVTYATFVNALTKKGKLGTALRLFQA 317
+++G C G + EA+R +++ C P TY + L K G++ AL+ FQ
Sbjct: 369 LVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQR 428
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
M +G PD V+ + I++ L R +A
Sbjct: 429 MRSQGCDPDGVSYSTIVEGLARSGRALQA 457
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
M GC PN T+N+L+ K R L+ M + PN +++N LL+ L K
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQ--PNVVSYNGLLEGLCKL 58
Query: 413 E---EVPWVLERMERNGCKMSTD--TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
E E ++ M G + + D TY+ +L Y ++ R +E+ +G+ PD
Sbjct: 59 ERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL 118
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
YT ++ L RL +AL EM G P
Sbjct: 119 MYTKVMASLCKSARLGEALELLEEMIRAGCCP 150
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 173/361 (47%), Gaps = 20/361 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + FN ++ L + R E ++ + M PD + TYG L+N V+ A
Sbjct: 279 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPD---DITYGYLMNGLCKIGRVDAA 335
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+F R + + F L+ + ++ A+ +G D+ T N ++
Sbjct: 336 KDLFYRIPKPTSV----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 391
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ G V A +D+ C+P+ +Y V+ K GK+ A L M G KP
Sbjct: 392 GYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKP 451
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ V NC+I A C + RIPEA+E+ REM +GC P+V T+NSLI LC++ ++ L
Sbjct: 452 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 511
Query: 386 DEMEQKNGSCLPNEITFNYLLKS-LKKPE--EVPWVLERMERNGCKMSTDTYNVILKLYV 442
+M + + N +T+N L+ + L++ E E ++ M G + TYN ++K
Sbjct: 512 RDMISE--GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLC 569
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
DK R +E+M + G+ P S ++I+GL G +E+A+ + EM L+G P+
Sbjct: 570 RAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 629
Query: 503 T 503
T
Sbjct: 630 T 630
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 158/375 (42%), Gaps = 15/375 (4%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKT 190
D + F W + Y +V+ ++ LG F + ++ +M D + E
Sbjct: 83 LDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESL 142
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK--HVEVAETFFES 248
+ ++ Y A + + + + N++L + H A F++
Sbjct: 143 FISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDM 202
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ + T +++ C + V A +D+ K C P+SV Y T +++L+K ++
Sbjct: 203 LSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 262
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL+L + M+ G PD T N +I LC RI EA +++ M RG P+ TY L
Sbjct: 263 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYL 322
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN 425
+ LCKI R++ + + + P + FN L+ + ++ VL M +
Sbjct: 323 MNGLCKIGRVDAAKDLFYRIPK------PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 376
Query: 426 -GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G TYN ++ Y +M KG P+ SYT+++ G G++++
Sbjct: 377 YGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDE 436
Query: 485 ALSYFHEMRLKGMVP 499
A + +EM G+ P
Sbjct: 437 AYNLLNEMSADGLKP 451
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 6/262 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM-PDLVNEKTYGI--LLNRYAAAHMVEEAIGV 210
P + ++D + + E + +EM D + T G L++ + H + EA+ +
Sbjct: 416 PNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 475
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
F G D+ F +L+ LC ++ A +E + T N ++N +
Sbjct: 476 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 535
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA++ +++ D +TY + + L + G++ A LF+ M G P ++
Sbjct: 536 RGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSIS 595
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
CN +I+ LC + EA+E +EM RG P++ T+NSLI LC+ R+E +++
Sbjct: 596 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 655
Query: 390 QKNGSCLPNEITFNYLLKSLKK 411
+ P+ +T+N L+ L K
Sbjct: 656 AEGIP--PDTVTYNTLMSWLCK 675
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 40/275 (14%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP------------- 183
+ AY +S +G P + FN ++ + R E +++F EMP
Sbjct: 435 DEAYNLLNEMSADG-LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 493
Query: 184 -------------------DLVNEK------TYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
D+++E TY L+N + ++EA + + G
Sbjct: 494 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 553
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAK 277
L D + +L+ LCR V+ A + FE ++ + NI++NG C G V EA
Sbjct: 554 SLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAV 613
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
F K+++ PD VT+ + +N L + G++ L +F+ + +G PD VT N ++ L
Sbjct: 614 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWL 673
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
C + +A +L E G +PN T++ L++ L
Sbjct: 674 CKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 13/225 (5%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKG---RKPDVVTCNCIIDALCFKKRIPEALEVL 350
Y + L G+ T RL M ++G ++ ++ D F + ++
Sbjct: 107 VYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPG---QTTRLM 163
Query: 351 REMKN-RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
EM+N C P +YN +++ L + +M + P TF ++K+L
Sbjct: 164 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIP--PTLFTFGVVMKAL 221
Query: 410 KKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
EV VL M ++GC ++ Y ++ + ++ EEM G PD
Sbjct: 222 CAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 281
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
++ +I GL R+ +A + M ++G P+ T G L+N +
Sbjct: 282 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGL 326
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 167/353 (47%), Gaps = 15/353 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
+N +++ RA ++ D +P + TY L+ V +A+ VFD G
Sbjct: 131 YNTMVNGYCRAGNIDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRG 190
Query: 219 ELDDLSAFQNLLLWLCR---YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
+ + LL C+ YK V S+ E DI T N+++N C G+V E
Sbjct: 191 CSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCE--PDIVTYNVLINAMCSQGDVGE 248
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A + + C+PD+VTY + +L + A +L M+ PD VT N +I
Sbjct: 249 ALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVIT 308
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY----EYLDEMEQK 391
+LC K + A +VL +M GC P++ TY+S++ LCK +R++ E L EM K
Sbjct: 309 SLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSK 368
Query: 392 NGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE- 447
N C+P+++TFN ++ SL + + V++ M +GC TYN I+ ++ C+
Sbjct: 369 N--CIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKT 426
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++ M G+ PD +Y + GL + +E A+ F ++ G+ P+
Sbjct: 427 EEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPD 479
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 163/349 (46%), Gaps = 25/349 (7%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L A R V I + P ++ IL+ + A V +A V + G +
Sbjct: 77 LDGALRLVHSISGSGKDPAVI---PCNILIKKLCADGRVADAERVVE---ALGPSATIIT 130
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
+ ++ CR +++ A +S F D T N ++ CV G V +A + D++
Sbjct: 131 YNTMVNGYCRAGNIDAARRMIDSVP--FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLH 188
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
C P VTY+ ++A K+ A+ L M KG +PD+VT N +I+A+C + + E
Sbjct: 189 RGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGE 248
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
AL+VL + + GC P+ TY ++K LC +R E + L +M + C P+E+TFN +
Sbjct: 249 ALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSND--CAPDEVTFNAV 306
Query: 406 LKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK--------VRHTW 454
+ SL + V VL +M +GC TY+ I+ + C+++ ++
Sbjct: 307 ITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIM----DGLCKERRVDEAIKLLKELL 362
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
EM K PDQ ++ +I L KG + A+ EM G +P+ T
Sbjct: 363 AEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITT 411
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 163/349 (46%), Gaps = 22/349 (6%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP ++ +LD + + + + + DEM PD+V TY +L+N + V E
Sbjct: 192 SPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIV---TYNVLINAMCSQGDVGE 248
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILN 265
A+ V + +G D + +L LC + E A+ N+ D T N ++
Sbjct: 249 ALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVIT 308
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA----MWEK 321
C G V A + + + C PD +TY++ ++ L K+ ++ A++L + M K
Sbjct: 309 SLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSK 368
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH-LCKIKRMET 380
PD VT N II +LC K A++V+ EM GC+P++TTYN ++ LCK + E
Sbjct: 369 NCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEE 428
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVI 437
+ L+ M NG C P+ T+ L L + +E+ + R++ G YN I
Sbjct: 429 ALDLLNLM-VSNGLC-PDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAI 486
Query: 438 L-KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
L L W D + M G PD+ +Y +++ G+ +G LE+A
Sbjct: 487 LLGLCKKWR-TDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEA 534
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
+ L ++G+L ALRL ++ G+ P V+ CN +I LC R+ +A V+ + G
Sbjct: 68 LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL---GP 124
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEV 415
+ TYN+++ C+ ++ +D + P+ T+N L+++L +
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRMIDSVPFA-----PDTFTYNPLIRALCVRGCVLDA 179
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
V + M GC S TY+++L + +EM KG PD +Y V+I+
Sbjct: 180 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINA 239
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +G + +AL + + G P+ T
Sbjct: 240 MCSQGDVGEALKVLNSLPSYGCKPDAVT 267
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 21/254 (8%)
Query: 151 DYSPGSNVFNAILDVL------GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMV 204
D +P FNA++ L GRA + + + PD++ TY +++ V
Sbjct: 295 DCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDII---TYSSIMDGLCKERRV 351
Query: 205 EEAIGVFDRRKEFGEL------DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--D 256
+EAI + ++ E+ D F ++ LC+ + A + E +E G D
Sbjct: 352 DEAIKLL--KELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVD-EMSEHGCIPD 408
Query: 257 IKTMNIILNGW-CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
I T N I++G+ C EA ++ + PD+ TY + L+++ ++ A+ +F
Sbjct: 409 ITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMF 468
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ + G PD + N I+ LC K R A++ M + GC+P+ +TY L++ +
Sbjct: 469 RRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYE 528
Query: 376 KRMETVYEYLDEME 389
+E E L +
Sbjct: 529 GFLEEAKELLGNLS 542
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 181/369 (49%), Gaps = 21/369 (5%)
Query: 143 FKWVSREGDYS--PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNR 197
F+ ++ +G++ P +N IL L + E+ V+ E+ + N T+ ++N
Sbjct: 144 FRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNG 203
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF------ESEKN 251
Y V EA + + G D + +L+L CR K V+ A F ++N
Sbjct: 204 YCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRN 263
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
E Y N+I +G C G + EA + + D+ + C P TY + AL+ G+ A
Sbjct: 264 EVSYT----NLI-HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L LF M EKG +P+V T +ID LC + ++ EA ++L EM +G +P+V TYN+LI
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
CK ++ +E LD ME + SC PN T+N L+ L +K + +L +M
Sbjct: 379 YCKEGMIDDAFEILDLME--SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
S TYN ++ + + M + G+ PDQ +Y+V I L +GR+E+A +
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496
Query: 489 FHEMRLKGM 497
F ++ KG+
Sbjct: 497 FDSVKAKGV 505
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 193/452 (42%), Gaps = 56/452 (12%)
Query: 126 VNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL 185
V+ + + D + A +FF W++ + + ++++L++L RAR
Sbjct: 71 VSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLG------------ 118
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL---DDLSAFQNLLLWLCRYKHV-EV 241
V EK ++ + V + VF + GE L + +L+ L ++ + E+
Sbjct: 119 VAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEM 178
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS--------- 292
+ E N+ +I T N ++NG+C +GNV EA+ + I+++ PD+
Sbjct: 179 KTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILG 238
Query: 293 --------------------------VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
V+Y ++ L + G++ AL+LF M E P
Sbjct: 239 HCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPT 298
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V T +I AL R EAL + EMK +GC PNV TY LI LCK +M+ + L
Sbjct: 299 VRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLS 358
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM +K +P+ +T+N L+ K ++ +L+ ME N C +T TYN ++
Sbjct: 359 EMSEKG--LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K +M ++ + P +Y +IHG LE A M G+VP+ T
Sbjct: 417 KRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWT 476
Query: 504 GILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
+ D K E G + + G+K N
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 171/368 (46%), Gaps = 9/368 (2%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E + P + ++ L + R VE + +F+EM + N TY +L++ + ++
Sbjct: 292 EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMD 351
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
EA + E G + + + L+ C+ ++ A E E N G + +T N ++
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G C V++A +++ K P +TY + ++ K L +A RL M E G
Sbjct: 412 CGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD T + ID LC + R+ EA + +K +G N Y +LI CK+ +++ Y
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
L+ M N +CLPN T+N L++ L KK +E ++ +M G K + TY +++
Sbjct: 532 LERM--LNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEM 589
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ D + M G PD +YT +H + +G LE+ +M +G++P+
Sbjct: 590 LKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDL 649
Query: 502 RTGILVND 509
T ++ D
Sbjct: 650 VTYTVLID 657
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 158/359 (44%), Gaps = 9/359 (2%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
+E P + + ++D L + + E ++ EM + + + TY L++ Y M+
Sbjct: 326 KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMI 385
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNII 263
++A + D + + + L+ LC+ + V A + + + T N +
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSL 445
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++G C + ++ A R + ++ PD TY+ F++ L K+G++ A LF ++ KG
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGV 505
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
K + V +ID C +I A +L M N CLPN TYN LI+ LCK K+M+
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
+ +M P +T+ L+ + K + V M G + TY L
Sbjct: 566 LVAKMLTMGVK--PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
Y + ++V +M ++G+ PD +YTV+I G G A + M G P
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKP 682
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 152/360 (42%), Gaps = 38/360 (10%)
Query: 153 SPGSNVFNAIL------DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
SP +N+++ + L A R + L+ +PD + TY + ++ VEE
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPD---QWTYSVFIDTLCKEGRVEE 492
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILN 265
A +FD K G + + L+ C+ ++VA + E N+ + T N+++
Sbjct: 493 AGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIE 552
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C + EA ++ +P VTY + + K G AL++F M G +P
Sbjct: 553 GLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQP 612
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DV T + A + + E +V+ +M G LP++ TY LI ++ +++L
Sbjct: 613 DVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFL 672
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDT------YNVILK 439
M + C P+ + L+K+L RM+ ++ D+ Y + LK
Sbjct: 673 KCM--VDTGCKPSLYIVSILIKNLSHEN-------RMKETRSEIGIDSVSNTLEYEIALK 723
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
L+ E+M + G D Y +I G + RLE+A H M+ +GM P
Sbjct: 724 LF-------------EKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP 770
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 155/382 (40%), Gaps = 26/382 (6%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTY 191
D E+AY ++ G P ++ +D L + R E +FD + NE Y
Sbjct: 454 DLESAYRLLSLMNENG-LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIY 512
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
L++ Y ++ A + +R L + + L+ LC+ K ++ A + ++
Sbjct: 513 TALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLV-AKML 571
Query: 252 EFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
G + T I++ G A + + ++ +PD TY F++A +G L
Sbjct: 572 TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+ M E+G PD+VT +ID A + L+ M + GC P++ + LI
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691
Query: 370 KHLCKIKRMETV--------------YEYLDEMEQK--NGSCLPNEITFNYLLKSL---K 410
K+L RM+ YE ++ +K C + + L+ +
Sbjct: 692 KNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQE 751
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+ EE ++ M+ G S D YN +L + + M + G+ P SY
Sbjct: 752 RLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYK 811
Query: 471 VMIHGLYDKGRLEDALSYFHEM 492
+++ GLY +G E A + FH +
Sbjct: 812 LLVCGLYIEGSNEKAKAVFHGL 833
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 138/354 (38%), Gaps = 78/354 (22%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P S +N +++ L + ++ E + +M P +V TY IL+ + A
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVV---TYTILIGEMLKDGAFDHA 598
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE------SEKNEFGY--DIKT 259
+ VF+ G D+ + L H ++ E ++ NE G D+ T
Sbjct: 599 LKVFNHMVSLGYQPDVCTYTAFL-------HAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG---------- 309
++++G+ LG + A F K ++ + C+P + + L+ + ++
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDS 711
Query: 310 --------TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
AL+LF+ M E G DV +I C ++R+ EA ++ MK RG P+
Sbjct: 712 VSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPS 771
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKN------------------GSCLPNEITFN 403
YNSL+ CK+ +D M + GS + F+
Sbjct: 772 EDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFH 831
Query: 404 YLLKSLKKPEEVPW------------------VLERMERNGCKMSTDTYNVILK 439
LL +EV W +++ ME GC+ + TY+++++
Sbjct: 832 GLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIE 885
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNII 263
E A+ +F++ E G D+S + L+ C+ + +E A+ K N +
Sbjct: 719 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSL 778
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L+ C LG EA R ++++ P +Y V L +G A +F + G
Sbjct: 779 LDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGY 838
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
D V +ID L + + E E++ M+ +GC PN TY+ LI+ L
Sbjct: 839 NYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 180/403 (44%), Gaps = 58/403 (14%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM--------PDLVNEKTYGILLNRYAAAH 202
D P +N +L+ L + R+ E ++ +M PD+V TY LL+ Y A
Sbjct: 40 DIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMV---TYSTLLSGYCKAG 96
Query: 203 MVEEAIGVFDRRKEFGELDD-----------------------------------LSAFQ 227
VEE+ + G D L F
Sbjct: 97 KVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFN 156
Query: 228 NLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
L+ CR K++E+A++ + + D+ T N +++G C G + EA++ + + S
Sbjct: 157 TLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS 216
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
C PD V Y++FV L K GK+ A ++ + M + P+VVT N I+D LC +I A
Sbjct: 217 GCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTA 276
Query: 347 LEVLREMKNR-GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
LE++ +M + GC NV Y++++ LCK+ R + ++ M + C P+ +T++ L
Sbjct: 277 LEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG--CRPDVVTYSSL 334
Query: 406 LKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ L K EE + M GCK + TY ++ + + EEM G
Sbjct: 335 VNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGG 394
Query: 463 G-----PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
G P +Y +I GL GR++DAL +F MR +G P+
Sbjct: 395 GGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPD 437
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 146/324 (45%), Gaps = 44/324 (13%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY---DIKTMNIILNGWCVLGNVYEAKR 278
++ ++ LL LC+ + AE + G D+ T + +L+G+C G V E++
Sbjct: 44 NVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRE 103
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGK------------------------------- 307
K++I PD++ Y V +L K +
Sbjct: 104 LLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCC 163
Query: 308 ----LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
L A L Q M G K DVVT N ++D LC R+ EA ++L MK GC P+V
Sbjct: 164 REKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVV 223
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME 423
Y+S + LCK ++ ++ L++M + PN +T+N +L L K ++ LE ME
Sbjct: 224 AYSSFVYGLCKSGKVLDAHQVLEQMRDSHHD--PNVVTYNTILDGLCKSGKIDTALEMME 281
Query: 424 R----NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+ +GC ++ Y+ ++ + R E M + G PD +Y+ +++GL
Sbjct: 282 QMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKA 341
Query: 480 GRLEDALSYFHEMRLKGMVPEPRT 503
G++E+A+ EM ++G P T
Sbjct: 342 GKIEEAVEAVREMAMEGCKPNAVT 365
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 133/309 (43%), Gaps = 37/309 (11%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY L++ A ++EA + +R K G D+ A+ + + LC+ V A E
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM 248
Query: 250 KNEF-GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGK 307
++ ++ T N IL+G C G + A + + S C + V Y+T V+ L K G+
Sbjct: 249 RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
A + +AM G +PDVVT + +++ LC +I EA+E +REM GC PN TY S
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368
Query: 368 LIKHLCKIKRMETVYEYLDEM---EQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER 424
L+ LC R+ ++EM C P+ T+N L+ L K +
Sbjct: 369 LVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRI--------- 419
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
D ++ M +G PD SY+ ++ GL GR
Sbjct: 420 -----------------------DDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQ 456
Query: 485 ALSYFHEMR 493
A E+R
Sbjct: 457 AEMILSEVR 465
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 38/247 (15%)
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
++ C P+SVT+ VN +K+G+ G RL + M + +P+VV+ N +++ LC +R
Sbjct: 3 RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWH 62
Query: 345 EALEVLREMKNRG--CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN---------- 392
EA E++R+M +RG P++ TY++L+ CK ++E E L E+ +
Sbjct: 63 EAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122
Query: 393 -----------------------GSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
C P ITFN L+ K E +L++M +G
Sbjct: 123 VVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASG 182
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
K TYN ++ + E M+ G PD +Y+ ++GL G++ DA
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAH 242
Query: 487 SYFHEMR 493
+MR
Sbjct: 243 QVLEQMR 249
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 51/267 (19%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N ++D L +A R E Q+ + M PD+V Y + + V +A V +
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVV---AYSSFVYGLCKSGKVLDAHQVLE 246
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDIKTMNIILNGWCVL 270
+ ++ ++ + +L LC+ ++ A E + + G ++ + +++G C L
Sbjct: 247 QMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT- 329
G EA+ + + ++ C PD VTY++ VN L K GK+ A+ + M +G KP+ VT
Sbjct: 307 GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTY 366
Query: 330 -------CNC--------------------------------IIDALCFKKRIPEALEVL 350
C+C +I LC RI +AL+
Sbjct: 367 CSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFF 426
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKR 377
+ M+++GC P+ +Y+++++ L + R
Sbjct: 427 QRMRSQGCDPDGVSYSTIVEGLARSGR 453
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 10/217 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL----VNEKTYGILLNRYAAAHM 203
R+ + P +N ILD L ++ + +++ ++M +N Y +++
Sbjct: 249 RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNI 262
+EA V + G D+ + +L+ LC+ +E A E E + T
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSK-----CEPDSVTYATFVNALTKKGKLGTALRLFQA 317
+++G C G + EA+R +++ C P TY + L K G++ AL+ FQ
Sbjct: 369 LVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQR 428
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
M +G PD V+ + I++ L R +A +L E++
Sbjct: 429 MRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
M GC PN T+N+L+ K R L+ M ++ PN +++N LL+ L K
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQ--PNVVSYNGLLEGLCKL 58
Query: 413 E---EVPWVLERMERNGCKMSTD--TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
E E ++ M G + + D TY+ +L Y ++ R +E+ +G+ PD
Sbjct: 59 ERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL 118
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
YT ++ L RL +AL EM G P
Sbjct: 119 MYTKVVASLCKSARLGEALELLEEMIRAGCCP 150
>gi|357113487|ref|XP_003558534.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Brachypodium distachyon]
Length = 520
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 189/412 (45%), Gaps = 25/412 (6%)
Query: 105 TKGEIEKALNQCELTLTDDLIVNVINRYRF----DWEAAYTFFKWVSREGDYSPGSNVFN 160
T +E AL+ + L+ L+ V++R+RF A V R G +P +
Sbjct: 53 TPSAMESALSTSSILLSAPLLDLVLSRFRFAHGDPLRALSLLSLAVDRCG-VAPSPFTLD 111
Query: 161 AILDVLGRARRFV---ELIQVFDEM-PDLVNEKTYGILLNRYAAAHMVEEAIG------V 210
+ VLGRARRF +L+ + + PD V +T ++L R A V E +
Sbjct: 112 TAIYVLGRARRFTHMWDLVHSYHRLCPDAVTARTAMVVLGRVAKICSVRETVASFRRLLR 171
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
R +E E DL F LL LC+ K + A F + K EF + +T NI+L+GW
Sbjct: 172 LFRGREGTESADL--FNALLRTLCQEKSMSDARNVFHAHKYEFQVNRQTFNILLSGW--- 226
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
+A+ F+ ++ + +PD VTY + ++ K + A +L M EK PDV+T
Sbjct: 227 KTSEDAEAFFAEMRELGIDPDLVTYNSLIDCQCKNRDVEKAYKLLDEMREKEISPDVITY 286
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+I L + +A +L+EM GC P+V YN+ I++ KR+ + +DEM
Sbjct: 287 TSLIGGLGLIGQPDKARHLLKEMCELGCHPDVPAYNATIRNFVIAKRLGDAFALMDEMAS 346
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEV--PWVL-ERMERNGCKMSTDTYNVILKLYVNWDCE 447
K +PN T+N + ++ W+L ERM C +T + I++L
Sbjct: 347 KG--LMPNATTYNLFFRFYYWAYDIGSAWLLYERMRSERCFPNTQSCMFIVRLCHRHGKV 404
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ W +M G G V+ L D+G+LE+A FH+M G P
Sbjct: 405 MQALELWSDMVGNGFGSFTLVSDVLFDLLCDEGKLEEAERCFHQMVELGQKP 456
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A EM+ G P++ TYNSLI CK + +E Y+ LDEM +K S P+ IT+
Sbjct: 231 DAEAFFAEMRELGIDPDLVTYNSLIDCQCKNRDVEKAYKLLDEMREKEIS--PDVITYTS 288
Query: 405 LLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ L +P++ +L+ M GC YN ++ +V +EM KG
Sbjct: 289 LIGGLGLIGQPDKARHLLKEMCELGCHPDVPAYNATIRNFVIAKRLGDAFALMDEMASKG 348
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
+ P+ +Y + Y + A + MR + P ++ + +
Sbjct: 349 LMPNATTYNLFFRFYYWAYDIGSAWLLYERMRSERCFPNTQSCMFI 394
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 72/174 (41%), Gaps = 7/174 (4%)
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER 424
+N+L++ LC+ K M + + N TFN LL K E+ M
Sbjct: 185 FNALLRTLCQEKSMSDARNVFHAHKYEFQV---NRQTFNILLSGWKTSEDAEAFFAEMRE 241
Query: 425 NGCKMSTDTYNVILKLYV-NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G TYN ++ N D E K +EM +K + PD +YT +I GL G+ +
Sbjct: 242 LGIDPDLVTYNSLIDCQCKNRDVE-KAYKLLDEMREKEISPDVITYTSLIGGLGLIGQPD 300
Query: 484 DALSYFHEMRLKGMVPE-PRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
A EM G P+ P + + I K G+ + ++ S GL NA
Sbjct: 301 KARHLLKEMCELGCHPDVPAYNATIRNFVIA-KRLGDAFALMDEMASKGLMPNA 353
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 104/270 (38%), Gaps = 12/270 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A FF + RE P +N+++D + R + ++ DEM PD++ T
Sbjct: 230 EDAEAFFAEM-RELGIDPDLVTYNSLIDCQCKNRDVEKAYKLLDEMREKEISPDVI---T 285
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESE 249
Y L+ ++A + E G D+ A+ + K + A E
Sbjct: 286 YTSLIGGLGLIGQPDKARHLLKEMCELGCHPDVPAYNATIRNFVIAKRLGDAFALMDEMA 345
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ T N+ + ++ A ++ + +C P++ + V + GK+
Sbjct: 346 SKGLMPNATTYNLFFRFYYWAYDIGSAWLLYERMRSERCFPNTQSCMFIVRLCHRHGKVM 405
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL L+ M G + + + D LC + ++ EA +M G P+ + I
Sbjct: 406 QALELWSDMVGNGFGSFTLVSDVLFDLLCDEGKLEEAERCFHQMVELGQKPSSVAFRR-I 464
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
K L ++ E L+E + G +P +
Sbjct: 465 KILMQLANREESISKLNEKMARFGHLVPED 494
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 168/348 (48%), Gaps = 6/348 (1%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N +N +++ ++ E ++V D N TY +L +++A+ V DR+
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQL 198
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVY 274
+ D+ L+ C+ V A F E D+ T N+++ G+C G +
Sbjct: 199 QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLD 258
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA F K + C+ D +++ + +L G+ A++L M KG P VVT N +I
Sbjct: 259 EAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILI 318
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ LC K + +AL VL M G PN ++N LI+ C K ++ E+L+ M +
Sbjct: 319 NFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRG-- 376
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
C P+ +T+N LL +L K ++ +L ++ GC S +YN ++ + +
Sbjct: 377 CYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAV 436
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
EEM KG+ PD + T ++ GL +G++ +A+ +FH ++ G+ P
Sbjct: 437 ELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKP 484
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 159/339 (46%), Gaps = 9/339 (2%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+GR + ++ + +E +++ +Y +L+N Y + +EEA+ V D + +
Sbjct: 117 IGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTSV---APNAAT 173
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ +L LC ++ A + + Y D+ T ++++ C V +A + + ++
Sbjct: 174 YDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMR 233
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
C+PD VTY + K+G+L A+ + + G + DV++ N I+ +LC R
Sbjct: 234 GKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWM 293
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A+++L M +GC P+V T+N LI LC+ + L EM K+G PN +FN
Sbjct: 294 DAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVL-EMMPKHGH-TPNSRSFNP 351
Query: 405 LLKSLKKPEEVPWVLERME---RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L++ + + +E +E GC TYN++L D ++ KG
Sbjct: 352 LIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKG 411
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
P SY +I GL G+ E A+ EM KG+ P+
Sbjct: 412 CSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPD 450
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 153/321 (47%), Gaps = 12/321 (3%)
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEA 276
G++ D+ A L+ C+ + A E++ D + N+++N +C G + EA
Sbjct: 99 GKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEA 158
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
R + P++ TY + +L +GKL A+++ + PDVVTC +IDA
Sbjct: 159 LRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDA 215
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
C + + +A+++ EM+ +GC P+V TYN LIK CK R++ +L ++ C
Sbjct: 216 TCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYG--CQ 273
Query: 397 PNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
+ I+ N +L+SL + +L M R GC S T+N+++ K +
Sbjct: 274 SDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNV 333
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
E M K G P+ RS+ +I G ++ ++ A+ + M +G P+ T N +
Sbjct: 334 LEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVT---YNILLTA 390
Query: 514 LKERGEQGKKVIKLTSLGLKG 534
L + G+ V+ L+ L KG
Sbjct: 391 LCKDGKVDDAVVILSQLSSKG 411
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 167/392 (42%), Gaps = 52/392 (13%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + ++A+L L + + +QV D PD+V T +L++ V +
Sbjct: 168 APNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVV---TCTVLIDATCKESGVGQ 224
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKTMNIIL 264
A+ +F+ + G D+ + L+ C+ ++ A F + + +G D+ + N+IL
Sbjct: 225 AMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPS-YGCQSDVISHNMIL 283
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C G +A + +++ C P VT+ +N L +KG LG AL + + M + G
Sbjct: 284 RSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHT 343
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+ + N +I C +K I A+E L M +RGC P++ TYN L+ LCK +++
Sbjct: 344 PNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVI 403
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERN------------------- 425
L ++ K C P+ I++N ++ L K + +E +E
Sbjct: 404 LSQLSSKG--CSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGL 461
Query: 426 -------------------GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
G K + YN I+ +M G P +
Sbjct: 462 SREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTE 521
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
SYT +I G+ +G E+A +E+ +G+V
Sbjct: 522 ASYTTLIKGITYEGLAEEASKLSNELYSRGLV 553
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 170/387 (43%), Gaps = 32/387 (8%)
Query: 39 VTSHKTLIPIINLQARNSEFLFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNIL 98
V H ++ P A + + + +L ++ D + + + YP D + V I
Sbjct: 161 VLDHTSVAP----NAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYP-DVVTCTVL-ID 214
Query: 99 KTCSVSTKGEIEKALNQ-----C--ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGD 151
TC S G+ K N+ C ++ + LI R D A F K +
Sbjct: 215 ATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLD--EAIIFLKKLP---S 269
Query: 152 YSPGSNVF--NAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHM 203
Y S+V N IL L R+++ +++ M P +V T+ IL+N +
Sbjct: 270 YGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVV---TFNILINFLCQKGL 326
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNI 262
+ +A+ V + + G + +F L+ C K ++ A E + Y DI T NI
Sbjct: 327 LGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNI 386
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+L C G V +A + C P ++Y T ++ L K GK A+ L + M KG
Sbjct: 387 LLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKG 446
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
KPD++TC ++ L + ++ EA++ +K G PN YNS++ LCK ++
Sbjct: 447 LKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAI 506
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSL 409
++L +M NG C P E ++ L+K +
Sbjct: 507 DFLVDM-VANG-CKPTEASYTTLIKGI 531
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 103/242 (42%), Gaps = 9/242 (3%)
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G + E RF + + PD V + K G+ A R+ + E G D +
Sbjct: 83 GELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSY 142
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +I+A C I EAL VL + PN TY++++ LC +++ + LD Q
Sbjct: 143 NVLINAYCKSGEIEEALRVL---DHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD--RQ 197
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCE 447
C P+ +T L+ + K V ++ M GCK TYNV++K +
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GIL 506
D+ +++ G D S+ +++ L GR DA+ M KG P T IL
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNIL 317
Query: 507 VN 508
+N
Sbjct: 318 IN 319
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 8/194 (4%)
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L + G+L R + M KG+ PDVV C +I C R A ++ ++ G + +
Sbjct: 79 LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
+YN LI CK +E LD S PN T++ +L SL K ++ V
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLDHT-----SVAPNAATYDAVLCSLCDRGKLKQAMQV 193
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L+R ++ C T V++ + + EM KG PD +Y V+I G
Sbjct: 194 LDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCK 253
Query: 479 KGRLEDALSYFHEM 492
+GRL++A+ + ++
Sbjct: 254 EGRLDEAIIFLKKL 267
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 96/230 (41%), Gaps = 19/230 (8%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDV------LGRARRFVELIQVFDEMPDLVNEKTYG 192
A + + + G ++P S FN ++ + RA +E++ PD+V TY
Sbjct: 330 ALNVLEMMPKHG-HTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIV---TYN 385
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
ILL V++A+ + + G L ++ ++ L + E+A E E
Sbjct: 386 ILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLE----E 441
Query: 253 FGY-----DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
Y D+ T ++ G G V+EA +F+ + +P++ Y + + L K +
Sbjct: 442 MCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQ 501
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
A+ M G KP + +I + ++ EA ++ E+ +RG
Sbjct: 502 TSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRG 551
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 172/365 (47%), Gaps = 10/365 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A++ F + + G Y P + F ++ L + + D++ L ++ +YG L+
Sbjct: 139 AFSVFAKILKMG-YVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLI 197
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFG 254
+ A+ + R ++ + ++ +C+ K V E + F E
Sbjct: 198 HGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGIS 257
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ T + +++G+C+LG + +A + +I +PD T+ VNA K GK+ +
Sbjct: 258 PDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTV 317
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M ++G KP+ VT N ++D C K + +A + M G P++ +Y+ +I CK
Sbjct: 318 FDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCK 377
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMST 431
IK+ + EM +KN +P+ +T++ L+ L K + + L+ +M G +
Sbjct: 378 IKKFDEAMNLFKEMHRKN--IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTI 435
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TYN IL DK +++ KG+ P+ +Y+++I GL G+LEDA F
Sbjct: 436 RTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEG 495
Query: 492 MRLKG 496
+ +KG
Sbjct: 496 LLVKG 500
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 174/356 (48%), Gaps = 15/356 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++N I+D + + + E +F EM PD+V TY L++ + + +A
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVV---TYSALISGFCILGKLNDA 279
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNG 266
I +F++ D+ F L+ C+ ++ +T F+ K + T N +++G
Sbjct: 280 IDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDG 339
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C++ V +AK + + + PD +Y+ +N K K A+ LF+ M K PD
Sbjct: 340 YCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT + +ID L RI AL+++ +M +RG P + TYNS++ LCKI +++ L
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLT 459
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+++ K PN T++ L+K L K E+ V E + G ++ DTY ++++ +
Sbjct: 460 KLKDK--GIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCV 517
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++ +ME G PD ++Y ++I L+ K + A EM +G+ P
Sbjct: 518 EGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 191/411 (46%), Gaps = 16/411 (3%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D + A + F + R + +P + FN IL L +++ + ++ + +M P+LVN
Sbjct: 65 DVDDAVSLFNRLLRR-NTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN- 122
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
IL+N + ++ A VF + + G + D F L+ LC ++ A F +
Sbjct: 123 --CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDK 180
Query: 249 EKN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
F +D + +++G C +G A + + + +P+ V Y T ++++ K
Sbjct: 181 VVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKL 240
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A LF M KG PDVVT + +I C ++ +A+++ +M P+V T+N
Sbjct: 241 VNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNI 300
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMER 424
L+ CK +M+ D M ++ PN +T+N L+ +K+ + + M +
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQ--GIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G +Y++++ + D+ + ++EM +K + PD +Y+ +I GL GR+
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISY 418
Query: 485 ALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
AL +M +G+ P RT + D K+ + + + KL G++ N
Sbjct: 419 ALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPN 469
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 168/338 (49%), Gaps = 16/338 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+ F + +G SP ++A++ + + I +F++M PD+ T+
Sbjct: 244 AFDLFSEMISKG-ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVY---TFN 299
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKN 251
IL+N + ++E VFD + G + + +L+ C K V A++ F + +
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
DI++ +I++NG+C + EA +K++ + PD VTY++ ++ L+K G++ A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L+L M ++G P + T N I+DALC ++ +A+ +L ++K++G PN+ TY+ LIK
Sbjct: 420 LQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKG 479
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCK 428
LC+ ++E + + + K + N T+ +++ E +L +ME NGC
Sbjct: 480 LCQSGKLEDARKVFEGLLVKGHNL--NVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCI 537
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
TY +I+ D D EM +G+ P Q
Sbjct: 538 PDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQ 575
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 157/357 (43%), Gaps = 41/357 (11%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
+N +Y + + + V++A+ +F+R F +L L + KH
Sbjct: 48 INFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTV--L 105
Query: 246 FESEKNEF---GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
+ S+K EF ++ NI++N +C LG + A + I+K PD++T+ T + L
Sbjct: 106 YLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGL 165
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
KG++ A + G D ++ +I LC AL++L+ + PNV
Sbjct: 166 CLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQK-------------NGSCL------------- 396
YN++I +CK+K + ++ EM K +G C+
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNK 285
Query: 397 -------PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
P+ TFN L+ + K +E V + M + G K + TYN ++ Y
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+K + + M + G+ PD +SY++MI+G + ++A++ F EM K ++P+ T
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 174/358 (48%), Gaps = 18/358 (5%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAI 208
+ P + +N ++D L +A E ++V D M + E TYGIL+N A +E A
Sbjct: 256 FPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAE 315
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNG 266
+F G + + +L+ + ++ A + F+ E E GY D+ T ++++G
Sbjct: 316 ELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFD-EMVEAGYRPDVITHTVMIDG 374
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C GN +A + ++++++ C+P+ VTY T + L+K G++ A R+ + M G PD
Sbjct: 375 LCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPD 434
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VT C++D C R+ EA ++L E+ PN+ Y+SL+K LC +E + L
Sbjct: 435 SVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLF 494
Query: 387 EMEQKNGSCLPNEITFNYLLKSLK--KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
E + L + + ++ K + +E + +RM GCK TYN++ +N
Sbjct: 495 EQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNIL----ING 550
Query: 445 DC---EDKVRHTW---EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
C E++V + ++E G PD +YT + GL G ++ A+ E +G
Sbjct: 551 LCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 165/368 (44%), Gaps = 17/368 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
++ Y + + + G +P + FN ++ R RR + + F+ M PDL
Sbjct: 134 NYSQCYAIHEEMLKAG-IAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDL--- 189
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL-WLCRYKHV-EVAETFF 246
T+ IL++ A M E+A VF G + A ++ L + K V E E F
Sbjct: 190 HTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFG 249
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ EK F D N +++G G+ EA + +++ C P VTY VN+L K G
Sbjct: 250 QMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAG 309
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
L A LF+ M G +P+ V +I R+ EA + EM G P+V T+
Sbjct: 310 TLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHT 369
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERME 423
+I LCK E + +EM + G C PN +T+ +++ L K V +++ M
Sbjct: 370 VMIDGLCKSGNFEQAAKSFEEMMR--GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMI 427
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+GC + TY +L + D+ +E++K P+ + Y+ ++ GL D G +E
Sbjct: 428 AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVE 487
Query: 484 DALSYFHE 491
+ L E
Sbjct: 488 NTLDDLFE 495
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 151/390 (38%), Gaps = 41/390 (10%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A +FF+W + + +N ++++L + + + + +EM N ++ IL+
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILI 161
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+A ++A+ F+ K DL F L+ LC+ E A F +
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVF--------H 213
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
++ M + PD + V L K ++ A +F
Sbjct: 214 EMMAMGFV-------------------------PPDRALHTAMVRTLLKAKRVKEAREVF 248
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M + G PD + N +ID L EAL+VL M + C+P TY L+ LCK
Sbjct: 249 GQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKA 308
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTD 432
+E E M PN + + L+ K +E + + M G +
Sbjct: 309 GTLERAEELFRVMAASGFR--PNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVI 366
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
T+ V++ ++ ++EEM + G P+ +YT +I GL GR+ +A M
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM 426
Query: 493 RLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
G P+ T I + D KL E +
Sbjct: 427 IAHGCFPDSVTYICLLDGFCKLGRLDEAAQ 456
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 157/378 (41%), Gaps = 21/378 (5%)
Query: 58 FLFLGRI-ETAQLVHSLANSDEKSEFQRYP----GDEIAINVQNILKTCSVSTKGEIEKA 112
F LGR+ E AQL+ L Q Y G +V+N L +K E
Sbjct: 445 FCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENL 504
Query: 113 LNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRAR-- 170
+ L +IV + R D EA F + VS EG P + +N +++ L R+R
Sbjct: 505 ----DPGLCCSIIVGLCKTGRLD-EACRIFQRMVS-EG-CKPDATTYNILINGLCRSREN 557
Query: 171 ---RFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
R L+ + + L + TY L V+ A+ + + G D+ A+
Sbjct: 558 RVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYT 617
Query: 228 NLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
L LC V+ A + F+ + G D I+NG + +A +F+ ++I
Sbjct: 618 ALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGK 677
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPE 345
+P TY V AL G + A F+ M +G V+ + +I C ++
Sbjct: 678 GQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDA 737
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
AL++ +M +RG +P T SL L + + E E L EM G P+ TF +
Sbjct: 738 ALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAA--GGSPPHAATFTAI 795
Query: 406 LKSLKKPEEVPWVLERME 423
L L+K +E +L+ ++
Sbjct: 796 LDGLRKSDESGKLLKLVQ 813
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 7/279 (2%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF-GY--DIKTM 260
++EA +F R G D + + L+ LCR + V F E GY D T
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTY 581
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+ G C +G V A + ++ D V Y L +G++ A+ LFQ M
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G PD CII+ L K++ +A + EM +G P V TY +L++ LC ++
Sbjct: 642 QGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701
Query: 381 VYEYLDEMEQKN---GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVI 437
+ + M + GS + + + K+LK + + + R + + ++
Sbjct: 702 AFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLF 761
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
L + E K + +EM G P ++T ++ GL
Sbjct: 762 DGLVRSGKTE-KAQELLQEMAAGGSPPHAATFTAILDGL 799
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 153/317 (48%), Gaps = 6/317 (1%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETF 245
N T IL+N ++ V+ A V + + G + F L+ WLC+ K + E F
Sbjct: 132 NIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELF 191
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ D+ T I+NG C +G A K + ++ C+P+ VTY+T +++ K
Sbjct: 192 DDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKD 251
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
++ AL +F M KG PD+ T N +I LC + EA +L EM++ +P++ T+
Sbjct: 252 RRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTF 311
Query: 366 NSLIKHLC---KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERM 422
N L+ +C K+ + V + + EM + + + + Y L+S + E + + M
Sbjct: 312 NVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRS--EVVEARKLFDAM 369
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
GCK +YN+++ Y D+ + + EM +G+ P+ SY +IHGL G L
Sbjct: 370 ITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSL 429
Query: 483 EDALSYFHEMRLKGMVP 499
+A + F M G +P
Sbjct: 430 REARNLFKNMHTNGNLP 446
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 175/382 (45%), Gaps = 24/382 (6%)
Query: 141 TFFKWVSREGDYSPGSNVFNAIL------DV------------LGRARRFVELIQVFDEM 182
T W+ + G ++ +F+ ++ DV +G L++ +E
Sbjct: 173 TLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEA 232
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
N TY +++ + V EA+ +F K G D+ + +L+ LC + + A
Sbjct: 233 GCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEA 292
Query: 243 ETFFESEKN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
++ DI T N++++ C G V EA+ K + + EPD VTY++ +
Sbjct: 293 SALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYG 352
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+ + ++ A +LF AM KG KPDV + N +I+ C KRI EA ++ EM ++G PN
Sbjct: 353 YSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPN 412
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWV 418
+YN+LI LC++ + M NG+ LPN T++ LL K + +
Sbjct: 413 NVSYNTLIHGLCQLGSLREARNLFKNM-HTNGN-LPNLFTYSILLDGFCKQGYFGKAFRL 470
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
M+ K + YN+++ R + E+ KG+ P+ + YT +I+GL
Sbjct: 471 FRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCK 530
Query: 479 KGRLEDALSYFHEMRLKGMVPE 500
+G L++AL F M G P+
Sbjct: 531 EGLLDEALEAFRNMEEDGCPPD 552
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 10/226 (4%)
Query: 173 VELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
VE ++FD M PD+ +Y IL+N Y ++EA +F+ G + ++
Sbjct: 360 VEARKLFDAMITKGCKPDVF---SYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSY 416
Query: 227 QNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
L+ LC+ + A F++ N ++ T +I+L+G+C G +A R ++ +
Sbjct: 417 NTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQS 476
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+ +P+ V Y ++A+ K G L A +LF ++ KG +P+ II+ LC + + E
Sbjct: 477 TYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDE 536
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
ALE R M+ GC P+ +YN +I+ K + + EM K
Sbjct: 537 ALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDK 582
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 129/270 (47%), Gaps = 6/270 (2%)
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL-GTALRLFQAMWEKGRKPD 326
C N+ +A + ++ K P + + ++A+ K G+ T + L + M G P+
Sbjct: 73 CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+ T + +I+ +R+ A VL ++ G P + T+ +LI LCK+ + E D
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLERMERNGCKMSTDTYNVILKLYVN 443
+M + C P+ T+ ++ L K E +L++ME GC+ + TY+ I+ +
Sbjct: 193 DMVAR--GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRK 250
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ + M+ KG+ PD +Y +I GL + + ++A + +EMR ++P+ T
Sbjct: 251 DRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVT 310
Query: 504 GILVNDMNIKLKERGEQGKKVIKLTSLGLK 533
++ D K + E + +T +G++
Sbjct: 311 FNVLVDTICKEGKVSEAQGVLKTMTEMGVE 340
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 131/302 (43%), Gaps = 31/302 (10%)
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
D+RK DD +F+N+ L + H+ K + I+ +L
Sbjct: 65 DKRKH----DDACSFRNIDDALASFNHM---------------LHRKPLPCIIQFTKLLS 105
Query: 272 NVYEAKRFWKDIIK-------SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ + +++ +I + P+ T + +N + ++ A + + + G +
Sbjct: 106 AIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQ 165
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P +VT +I+ LC + +A+E+ +M RGC P+V TY ++I LCKI
Sbjct: 166 PTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGL 225
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLY 441
L +ME+ C PN +T++ ++ S +K V L+ M+ G TYN +++
Sbjct: 226 LKKMEE--AGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGL 283
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
N+ + EM + PD ++ V++ + +G++ +A M G+ P+
Sbjct: 284 CNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDV 343
Query: 502 RT 503
T
Sbjct: 344 VT 345
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 4/215 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N +++ + +R E Q+F+EM N +Y L++ + EA +
Sbjct: 376 PDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNL 435
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCV 269
F G L +L + LL C+ + A F + ++ + ++ NI+++ C
Sbjct: 436 FKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCK 495
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
GN+ +A++ + ++ +P++ Y T +N L K+G L AL F+ M E G PD ++
Sbjct: 496 SGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEIS 555
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
N II K A++++ EM+++G + +V T
Sbjct: 556 YNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590
>gi|242084014|ref|XP_002442432.1| hypothetical protein SORBIDRAFT_08g020000 [Sorghum bicolor]
gi|241943125|gb|EES16270.1| hypothetical protein SORBIDRAFT_08g020000 [Sorghum bicolor]
Length = 535
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 175/389 (44%), Gaps = 21/389 (5%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF----- 172
+ L+ D++ NV+N A TFF W P + N ++ LGR + F
Sbjct: 97 MALSPDVLANVVNAGDLSGAATVTFFDWAVTNSKPPPSVHTCNIVIRALGRKKFFDFLDD 156
Query: 173 -VELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG-----ELDDLSAF 226
+++++ + PDL T I+++ AA V A+ V +FG AF
Sbjct: 157 ALQIMRRNNIFPDLT---TLEIIIDSLVAARHVSRAVEVLST-DQFGFGIGKACHKKEAF 212
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEF-GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
L+ LCR HV +A + ++ + E G D N ++ GW G+V + + W + +
Sbjct: 213 TVLIRCLCRRSHVGLASSLLQAARKELLGLDCNVYNDVMGGWARFGSVDKLQEVWTKMQE 272
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
P+ V++ + L + G+ ALR F+ M + P + N +I +
Sbjct: 273 DGLVPNEVSHCHLIEGLGRAGQTEDALREFENMVHERYGPTTMAYNALIFNFISVGDLDS 332
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE---ITF 402
++ ++M + C PN+ TY+ ++K K +R+ + D+M + LPN +F
Sbjct: 333 CIKYYKDMLEKNCPPNIDTYSKMVKAFLKGRRVADALQMFDDMLVQG--VLPNTGMITSF 390
Query: 403 NYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
L + P + ++ + GC +S Y ++L+ + V WEEM++ G
Sbjct: 391 INPLCTFGPPHAALMIYKKSRKAGCVISLKAYKLLLERLAKFGKSGIVLDIWEEMQECGY 450
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
PD+ Y +++GL + G+++ A+S E
Sbjct: 451 QPDKEIYEFIVNGLCNVGKVDAAVSVVEE 479
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N C G + A +K K+ C Y + L K GK G L +++ M E G
Sbjct: 391 INPLCTFGPPHAALMIYKKSRKAGCVISLKAYKLLLERLAKFGKSGIVLDIWEEMQECGY 450
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLRE-MKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+PD I++ LC ++ A+ V+ E ++N CL V Y+ L L ++ ++ET Y
Sbjct: 451 QPDKEIYEFIVNGLCNVGKVDAAVSVVEESLRNGFCLGRV-VYSKLNNKLLEMDKVETAY 509
Query: 383 EYLDEMEQ 390
+++
Sbjct: 510 NLFKKVKH 517
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVE 205
E + P + ++ ++ + RR + +Q+FD+M L N +N
Sbjct: 342 EKNCPPNIDTYSKMVKAFLKGRRVADALQMFDDMLVQGVLPNTGMITSFINPLCTFGPPH 401
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNII 263
A+ ++ + ++ G + L A++ LL L ++ + +E E E GY D + I
Sbjct: 402 AALMIYKKSRKAGCVISLKAYKLLLERLAKFGKSGIVLDIWE-EMQECGYQPDKEIYEFI 460
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+NG C +G V A ++ +++ V Y+ N L + K+ TA LF+
Sbjct: 461 VNGLCNVGKVDAAVSVVEESLRNGFCLGRVVYSKLNNKLLEMDKVETAYNLFK 513
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 171/357 (47%), Gaps = 10/357 (2%)
Query: 152 YSPGSNV-FNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEA 207
+ P S V F +L + + + + ++ + +M N T IL+N + + V A
Sbjct: 60 HPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFA 119
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
V + + G D + F L+ LC + A F+ +E F ++ T ++NG
Sbjct: 120 FSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLING 179
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +GN A R + + + C+PD V Y + +++L K ++ A LF M +G PD
Sbjct: 180 LCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 239
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+ T ++ ALC +L +M N LP+V +++++ LCK ++ +E +D
Sbjct: 240 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 299
Query: 387 EMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
M Q+ P+ +T+ L+ + +E V + M R G +Y ++ Y
Sbjct: 300 MMIQRG--VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCK 357
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
DK + +EEM +K PD ++Y +++GL GRL+DA++ FHEM +G +P+
Sbjct: 358 IHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPD 414
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 167/362 (46%), Gaps = 15/362 (4%)
Query: 147 SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
S + ++ S FN + D L R + + P +V+ + LL A
Sbjct: 31 SSQNNFHSKSLHFNTLDDALSSFNRLLHM----HPPPSIVD---FAKLLTSIAKMKHYST 83
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
+ + + FG ++ L+ C V A + ++ + G+ D T ++
Sbjct: 84 VLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVL-AKILKLGHQPDPTTFTTLI 142
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G CV G + EA + +I +P+ VTY T +N L K G A+RL ++M + +
Sbjct: 143 RGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ 202
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDVV IID+LC +++ EA + +M +G P++ TY SL+ LC + + V
Sbjct: 203 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 262
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
L++M N LP+ + F+ ++ +L K E +++ M + G + TY ++ +
Sbjct: 263 LNQM--VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGH 320
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
D+ ++ M +KG PD SYT +I+G +++ A+ F EM K +P+
Sbjct: 321 CLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 380
Query: 502 RT 503
+T
Sbjct: 381 KT 382
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 164/381 (43%), Gaps = 40/381 (10%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAI 208
+ P F ++ L + E + +FD+M D N TYG L+N AI
Sbjct: 131 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 190
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGW 267
+ ++ D+ + +++ LC+ + V A F + DI T +++
Sbjct: 191 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 250
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C L ++ SK PD V ++T V+AL K+GK+ A + M ++G +PDV
Sbjct: 251 CNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDV 310
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT ++D C + + EA++V M +G P+V +Y +LI CKI +++ +E
Sbjct: 311 VTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEE 370
Query: 388 MEQKN-------------GSC--------------------LPNEITFNYLLKSLKKP-- 412
M +K G C +P+ +T++ LL SL K
Sbjct: 371 MCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRH 430
Query: 413 -EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
EE +L+ +E + YN+I+ + R + + KG+ P +Y +
Sbjct: 431 LEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNI 490
Query: 472 MIHGLYDKGRLEDALSYFHEM 492
MIHGL +G L +A F EM
Sbjct: 491 MIHGLCKRGLLNEANKLFMEM 511
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 155/358 (43%), Gaps = 15/358 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
+G+ P ++ +I+D L + R+ E +F +M PD+ TY L++
Sbjct: 198 QGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF---TYTSLVHALCNLC 254
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMN 261
+ + ++ L D+ F ++ LC+ V A + + D+ T
Sbjct: 255 EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 314
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++G C+ + EA + + +++ PD ++Y T +N K K+ A+ LF+ M K
Sbjct: 315 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 374
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
PD T N ++ LC R+ +A+ + EM RG +P++ TY+ L+ LCK + +E
Sbjct: 375 EWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEA 434
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVIL 438
L +E N + P+ +N ++ + + E+ + + G S TYN+++
Sbjct: 435 MALLKAIEASNLN--PDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 492
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ + EM+ PD +Y + G A+ EM +G
Sbjct: 493 HGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 550
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 140/322 (43%), Gaps = 48/322 (14%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +F+ ++D L + + E ++ D M PD+V TY L++ + ++EA
Sbjct: 273 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVV---TYTTLMDGHCLQSEMDEA 329
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
+ VFD G F D+ + ++NG+
Sbjct: 330 VKVFDMMVRKG----------------------------------FAPDVISYTTLINGY 355
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C + + +A ++++ + + PD+ TY T + L G+L A+ LF M +G+ PD+
Sbjct: 356 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDL 415
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT + ++D+LC + + EA+ +L+ ++ P++ YN +I +C+ +E +
Sbjct: 416 VTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSN 475
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
+ K P+ T+N ++ L K E + M+ N C TYN I + ++
Sbjct: 476 LSSKG--LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQN 533
Query: 445 DCEDKVRHTWEEMEKKGMGPDQ 466
+ + EEM +G D
Sbjct: 534 NETLRAIQLLEEMLARGFSADS 555
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 167/332 (50%), Gaps = 10/332 (3%)
Query: 172 FVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
F +++VF P V +K G ++ H AI +F + + G ++ F L+
Sbjct: 43 FNRMVRVFPPPPTSVFDKLLGAIVR---MGHY-PTAISLFTQLQSKGISPSIATFTILIN 98
Query: 232 WLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
H A + + K+ + ++ T N I+NG+C+ G +++A F ++++
Sbjct: 99 CYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLF 158
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D TY T +N L+K G++ AL L Q M + +P++V + +ID LC + +AL +
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
++ RG L + TYNSLI C + R + V + L +M ++N P++ TFN L+ +L
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD--PDDYTFNILIDALC 276
Query: 411 KPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
K E VL M + G K TYN +++ Y + + + R + M K+G+ PD
Sbjct: 277 KEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVL 336
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+Y V+I G +++A+ F E+ K +VP
Sbjct: 337 NYNVLIDGYCKTKMVDEAMVLFKELCNKNLVP 368
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 182/399 (45%), Gaps = 33/399 (8%)
Query: 107 GEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVL 166
G I KAL+ C+ L Y FD T +S+ G +
Sbjct: 139 GMIFKALDFCQNLLAQG--------YLFDQFTYGTLINGLSKNGQ--------------I 176
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
A ++ ++ P+LV Y L++ V +A+G+ + E G L D +
Sbjct: 177 KAALHLLQEMEKSSVQPNLV---MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTY 233
Query: 227 QNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
+L+ C EV + + + D T NI+++ C G + EA+ + K
Sbjct: 234 NSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSK 293
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+PD VTY + + + A LF M ++G +PDV+ N +ID C K + E
Sbjct: 294 RGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDE 353
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE-ITFNY 404
A+ + +E+ N+ +P + +YNSLI LC R+ V + LDEM +GS P + +T+N
Sbjct: 354 AMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM---HGSAQPPDVVTYNI 410
Query: 405 LLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ +L K E VL M + G K + TYN ++ Y + + + + M K G
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ PD +Y V+I+G +++A+ F EMR K ++P+
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 181/416 (43%), Gaps = 58/416 (13%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
W+ + RE + P FN ++D L + R +E V M PD+V
Sbjct: 246 WQEVTQLLTKMVRE-NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV--- 301
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY L+ Y + V EA +F+R + G D+ + L+ C+ K V+ A F+
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 250 KNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
N+ I + N +++G C G + K+ ++ S PD VTY ++AL K+G++
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRI 421
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI------------------------- 343
AL + M +KG KP++VT N ++D C + +
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVL 481
Query: 344 ----------PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
EA+ + +EM+++ +P++ +YNSLI LC + R+ V E LDEM
Sbjct: 482 INGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ 541
Query: 394 SCLPNEITFNYLLKSLKK--PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD----CE 447
S P+ IT+N LL + K P + L R G T + I+ + E
Sbjct: 542 S--PDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAE 599
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D ++H + G P+ ++YT++I+ L G +A+ +M P+ T
Sbjct: 600 DALKH----LLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAIT 651
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 36/237 (15%)
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C NV +A + +++ P + + + A+ + G TA+ LF + KG P +
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T +I+ + A +L + G PN+ T+N++I C I M +++ LD
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFC-INGM--IFKALDF 147
Query: 388 MEQKNGSC-LPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ L ++ T+ L+ L K ++ L
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAAL--------------------------- 180
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
H +EMEK + P+ Y+ +I GL G + DAL ++ +G++ + T
Sbjct: 181 -----HLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 206/504 (40%), Gaps = 87/504 (17%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVF-- 159
SV + E E AL + L + + V+ + D + + FF+WV+R N F
Sbjct: 14 SVGDRPEAEAALAKYSRNLVPNTVGRVLQVIK-DVDVSLFFFRWVTRSHRGESIHNNFTC 72
Query: 160 NAILDVLGRARRFVELIQVF-DEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
N +L L +ARR + Q+F DE+ N TY L+ + A +E A + K
Sbjct: 73 NCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMK 132
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--------------------------- 248
E G D+ +++ LC ++ A +F
Sbjct: 133 ERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQLSEA 192
Query: 249 -----EKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
E +E G D+ T N +++G C + EA++ + ++K K P+ VTY T +
Sbjct: 193 RQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYG 252
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K G G A +L + M + G PDVVT N +I C K +I +A EVL MK C PN
Sbjct: 253 YCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPN 312
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK-------------- 407
+ TYN LI LC R E L EM+ + LP+ IT+N L+
Sbjct: 313 LVTYNVLISGLCDAGRANEACELLSEMDGRG--ILPDIITYNSLIGIFCRNFQIEQAFQI 370
Query: 408 ---------------------SLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+L K E E +L+ M G + T+N +++
Sbjct: 371 QNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCC 430
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ RH M + G P +Y V++ GL GR++DA M +G+ P
Sbjct: 431 SRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQP---- 486
Query: 504 GILVNDMNIKLKERGEQGKKVIKL 527
LV+ + +GK+ + L
Sbjct: 487 --LVSSSGTIVHTLAREGKQDLAL 508
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 175/399 (43%), Gaps = 45/399 (11%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE----MPDLVNEKT 190
D E A+ + G +SP ++I+ L +Q F E PD V
Sbjct: 120 DMERAFQLLAEMKERG-HSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSV---L 175
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE- 249
+ IL++ A+ + EA + + E G + D+ + +L+ LC+ +E A E+
Sbjct: 176 FNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMV 235
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K + ++ T N ++ G+C G A + + +I+S PD VT+ + ++ +K K+
Sbjct: 236 KRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKID 295
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A + M + P++VT N +I LC R EA E+L EM RG LP++ TYNSLI
Sbjct: 296 KACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLI 355
Query: 370 KHLCKIKRMETVYEYLDEMEQK---------------------------------NGSCL 396
C+ ++E ++ + M ++ + +
Sbjct: 356 GIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAI 415
Query: 397 PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
PN TFN L++ L ++ +E +L M R GC + TY V++ D +
Sbjct: 416 PNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEV 475
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
M +G+ P S ++H L +G+ + AL YF ++
Sbjct: 476 LVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQV 514
>gi|297828902|ref|XP_002882333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328173|gb|EFH58592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 506
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 194/457 (42%), Gaps = 79/457 (17%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
+ L+D L+ +++R+R DW++A W + ++ ++ +D+LG+A+++ L
Sbjct: 81 VNLSDGLVYKLLHRFRDDWKSALGVLNWAESCKGHKHSNDAYDMAVDILGKAKKWDRLKV 140
Query: 178 VFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+ M LV T ++ R+A A EEA+G+FD+ EFG + + LL LC+
Sbjct: 141 FVERMRGDKLVTLNTIAKIMRRFAGAGEWEEAVGIFDKLGEFGLEKNTESMNLLLDTLCK 200
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW--------------- 280
K VE A K+ + T NI ++GWC V EA W
Sbjct: 201 EKRVEQARVVLLELKSHITPNAHTFNIFIHGWCKANRVEEA--LWTIQEMKGHGFRPCVI 258
Query: 281 --KDIIKSKCE--------------------PDSVTYATFVNALTKKGKLGTALRLFQAM 318
II+ C+ P+S+TY T +++L + + ALR+ M
Sbjct: 259 SYTTIIRCYCQQSEFVKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 318
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR-EMKNRGCLPNVTTYNSLIKHLCKIKR 377
G +PD + NC+I L R+ EA V R EM G N +TYNS+I C
Sbjct: 319 KRSGCQPDSLFYNCLIHTLARSGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 378
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVI 437
+ E L EME N C P+ T+ LL+S K +V V +
Sbjct: 379 EDKAIELLKEMESSN-LCNPDVHTYQPLLRSCFKRGDVVEV----------------GKL 421
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
LK E + K + D+ +YT +I L E A F EM + +
Sbjct: 422 LK---------------EMVTKHHLSLDESTYTFLIQRLCRANICEWAYCLFEEMISQDI 466
Query: 498 VPEPRTGIL----VNDMNI-KLKERGEQGKKVIKLTS 529
P RT +L V N+ + ER E K +KLT+
Sbjct: 467 TPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLTA 503
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 183/389 (47%), Gaps = 30/389 (7%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+ A FF W + Y + +N +LD+L ++ +V+ ++ P+LV T
Sbjct: 8 DLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLV---T 64
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-E 249
+ IL+ A A+ EF D+ F L+ L + + + A FE+ E
Sbjct: 65 FKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENME 124
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNA-LTKKG 306
+ DI T N +++G C GN+ +A+ +++I+ K PD VTY T +NA + K G
Sbjct: 125 SSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDG 184
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ AL + M G PDV+T N II ALC R+ EA E+L+ M C P++ T+N
Sbjct: 185 DVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFN 241
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERME 423
+L+ CK + E L+EM ++N LP+ IT+ L+ L + +V ++LE +
Sbjct: 242 TLLDGFCKAGMLPRALEVLEEMCREN--ILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 299
Query: 424 RNGCKMSTDTYNVILK-LYVNWDCED--------KVRHTWEEMEKKGMGPDQRSYTVMIH 474
R G Y ++ L + + E+ R EM M P +Y +++
Sbjct: 300 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLG 359
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
GL G + A+S ++ +G VP+ T
Sbjct: 360 GLIKDGSISKAVSLISDLVARGYVPDVVT 388
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 170/383 (44%), Gaps = 53/383 (13%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTY 191
D E A + G +P +N+I+ L A R VE ++ M PDLV T+
Sbjct: 185 DVEEALEILDGMKLAGP-APDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLV---TF 240
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
LL+ + A M+ A+ V + L D+ + L+ LCR V+VA E E
Sbjct: 241 NTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLE-EIV 299
Query: 252 EFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDI---------IKSKCEPDSVTYATFVN 300
GY D+ +++G C G + EA + K++ + P TY +
Sbjct: 300 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLG 359
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K G + A+ L + +G PDVVT N +ID LC R+ EA ++ EM + GC P
Sbjct: 360 GLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFP 419
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE 420
N T S++ LC++ R++ + + EM +K + PN + + L+ L K +
Sbjct: 420 NDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHA--PNVVVYTSLIDGLCKS-------D 470
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
RM+ + C V+L + M +G+ D +Y +I + G
Sbjct: 471 RMD-DAC--------VVL----------------DAMRGQGVALDDFAYRKLIVSMIHGG 505
Query: 481 RLEDALSYFHEMRLKGMVPEPRT 503
R+ +A++ + EM +G +P+ T
Sbjct: 506 RVAEAMAMYDEMVARGFLPDGST 528
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 136/284 (47%), Gaps = 12/284 (4%)
Query: 235 RYKHVEVAETFFE--SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
R ++A FF+ E++ + +D+ + N +L+ G+ + + +KD++ S C P+
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNL 62
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE-ALEVLR 351
VT+ + K G+ AL +A+ E PDV N +I L FK P+ A+++
Sbjct: 63 VTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGL-FKDGNPDQAVKLFE 121
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-- 409
M++ P++ TYN++I LCK +E E L+EM ++ G P+ +T+N L+ +
Sbjct: 122 NMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGIC 181
Query: 410 --KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
EE +L+ M+ G TYN I+ +V E ++ PD
Sbjct: 182 KDGDVEEALEILDGMKLAGPAPDVITYNSIIHALC---VAGRVVEAAEILKTMSCSPDLV 238
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
++ ++ G G L AL EM + ++P+ T ILVN +
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGL 282
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 109/302 (36%), Gaps = 89/302 (29%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP FN +LD +A ++V +EM PD++ TY IL+N V+
Sbjct: 234 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVI---TYTILVNGLCRVGQVQV 290
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE------------------- 247
A + + G + D+ A+ +L+ LC+ +E A +
Sbjct: 291 AFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPP 350
Query: 248 ------------------------SEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWK 281
S+ GY D+ T N +++G C V EA
Sbjct: 351 LFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLAD 410
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC--- 338
++ C P+ VT + V L + G++ A L M K P+VV +ID LC
Sbjct: 411 EMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSD 470
Query: 339 -----------------------FKK---------RIPEALEVLREMKNRGCLPNVTTYN 366
++K R+ EA+ + EM RG LP+ +T
Sbjct: 471 RMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSK 530
Query: 367 SL 368
+L
Sbjct: 531 TL 532
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 172/355 (48%), Gaps = 9/355 (2%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N FN ++ RF E I+V +M D + TY +L+ + EA +
Sbjct: 197 TNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLL 256
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLG 271
K G + + F L++ CR ++ A E +N D T N++++G+C G
Sbjct: 257 DMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQG 316
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ EA R +++ K PD VTY T +N + G +L + M +G KP+ VT N
Sbjct: 317 RIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYN 376
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
++ K ++ E + +R+M+ GCLP++ TYN+LI CK+ +M+ + +DEM +K
Sbjct: 377 VMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRK 436
Query: 392 NGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
+++T N +L++L +K +E +L R G + +Y ++ Y +
Sbjct: 437 GLKM--DDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKAS 494
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ W+EM++K + P +Y MI GL G+ A+ E+ G+VP+ T
Sbjct: 495 QALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEIT 549
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 146/313 (46%), Gaps = 11/313 (3%)
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK---HVEVAETFFESE 249
I + Y A +A +F+R K G L LL L R+ + +++ F ++
Sbjct: 129 ISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVF-TD 187
Query: 250 KNEFGYDIKT--MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ G I T NI+++G C+ EA R + C PD++TY T ++ L KKG+
Sbjct: 188 FIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGR 247
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L A L M KG P+ T N ++ C + EA V+ M +P+ TYN
Sbjct: 248 LNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNV 307
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMER 424
+I CK R+ +EME N P+ +T+N L+ EE ++E ME
Sbjct: 308 MISGFCKQGRIAEAMRLREEME--NLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEG 365
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G K ++ TYNV++K +V D+V T +ME+ G PD +Y +I G++++
Sbjct: 366 RGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDE 425
Query: 485 ALSYFHEMRLKGM 497
A EM KG+
Sbjct: 426 AFRLMDEMGRKGL 438
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 163/356 (45%), Gaps = 19/356 (5%)
Query: 153 SPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIG 209
SP +N +++ G + +LI+ + N TY +++ + ++E
Sbjct: 334 SPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDK 393
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWC 268
+ +E G L D+ + L+ W C+ ++ A E + D T+N +L C
Sbjct: 394 TVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALC 453
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+ EA + D V+Y T + K K ALRL+ M EK P ++
Sbjct: 454 RERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSII 513
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N +I LC + +A++ L E+ G +P+ TYN++I C+ ++E +++ ++M
Sbjct: 514 TYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKM 573
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME---RNGCKMSTDTYN-VILKLYVNW 444
+KN P+ +T N LL L K + L+ G + +YN +IL L
Sbjct: 574 VEKNFK--PDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSL---- 627
Query: 445 DCEDK----VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
C++K EEME+K +GPD +Y ++ GL D GR++DA + ++ KG
Sbjct: 628 -CKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 145/312 (46%), Gaps = 16/312 (5%)
Query: 234 CRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE---AKRFWKDIIKSKCEP 290
C H + A+ F ++ + T N +LN + + +K + D IK +
Sbjct: 137 CGRPH-QAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKI 195
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
++ ++ ++ + + G A+R+ M + G PD +T N I+D LC K R+ EA ++L
Sbjct: 196 NTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLL 255
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
+MKN+G PN TT+N L+ C++ ++ ++ M Q S +P+ T+N ++
Sbjct: 256 LDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQN--SVVPDAWTYNVMISGFC 313
Query: 411 KPEEVPWVLE-RMERNGCKMSTD--TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
K + + R E K+S D TYN ++ ++ EEME +GM P+
Sbjct: 314 KQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSV 373
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-------GILVNDMNIKLKERGEQ 520
+Y VM+ KG++++ +M G +P+ T V M+ + E
Sbjct: 374 TYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM 433
Query: 521 GKKVIKLTSLGL 532
G+K +K+ + L
Sbjct: 434 GRKGLKMDDVTL 445
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 18/248 (7%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPDL----------VNEKTYGILLNRYAAAHMVEEA 207
N +L L R R+ DE DL V+E +YG L+ Y +A
Sbjct: 444 TLNTMLRALCRERKL-------DEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQA 496
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNG 266
+ ++D KE + + + +++ LC+ K + + E ++ D T N I++G
Sbjct: 497 LRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHG 556
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C G V +A +F +++ +PD VT T + L K+G L AL+LF KG+ D
Sbjct: 557 YCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVD 616
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V+ N II +LC +KR EA ++L EM+ + P+ TYN+++ L RM+ E++
Sbjct: 617 AVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFIS 676
Query: 387 EMEQKNGS 394
++ +K S
Sbjct: 677 KIAEKGKS 684
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 163/383 (42%), Gaps = 15/383 (3%)
Query: 128 VINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----- 182
V+ R W + + P + +N ++ + R E +++ +EM
Sbjct: 274 VVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKL 333
Query: 183 -PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVE 240
PD+V TY L+N EE + + + G + + ++ W + K E
Sbjct: 334 SPDVV---TYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDE 390
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
V +T + E++ DI T N +++ C +G + EA R ++ + + D VT T +
Sbjct: 391 VDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLR 450
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
AL ++ KL A L + +G D V+ +I ++ +AL + EMK + +P
Sbjct: 451 ALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIP 510
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE 420
++ TYNS+I LC++ + + LDE+ + +P+EIT+N ++ + +V +
Sbjct: 511 SIITYNSMIAGLCQMGKTNQAIDKLDELLE--SGLVPDEITYNTIIHGYCQEGQVEKAFQ 568
Query: 421 ---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+M K T N +L +K + KG D SY +I L
Sbjct: 569 FHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLC 628
Query: 478 DKGRLEDALSYFHEMRLKGMVPE 500
+ R +A EM K + P+
Sbjct: 629 KEKRFGEAFDLLEEMEEKKLGPD 651
>gi|242038267|ref|XP_002466528.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
gi|241920382|gb|EER93526.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
Length = 595
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 3/281 (1%)
Query: 238 HVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
HV AE E + F ++ +L GWC G + EAK + + D V + T
Sbjct: 170 HVVTAEQLVEEPQTRFPLSLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVAFNT 229
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+ G+ A L M ++G P+ V+ +I L + R+ EA+ V EM+ +G
Sbjct: 230 LLAGFVADGRFEDAFELTGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKG 289
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP--EEV 415
C P+ TY +L+ CK ++ YE+LD + ++G + + + + KK EE
Sbjct: 290 CAPDAVTYGTLVSTFCKAGKISQGYEFLDAIS-RDGLRVDAAVYHGFFVAHEKKEQLEEC 348
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
++ERM C YNV+++L + W EME G+ P ++ +M++G
Sbjct: 349 LELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMSLWNEMETGGLSPGVDTFAIMVNG 408
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKE 516
L +G L +A SYF +M +G+ P+ G+L + +N +++
Sbjct: 409 LVGQGLLVEACSYFKDMVGRGLFVAPQYGVLKDLLNALVRD 449
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 129/339 (38%), Gaps = 36/339 (10%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L A+ + ++ D D+V + LL + A E+A + + ++ G + +
Sbjct: 205 LDEAKHVLARMKAADVALDVV---AFNTLLAGFVADGRFEDAFELTGQMEQRGCPPNAVS 261
Query: 226 FQNLLLWL-CRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ L R + E F E + D T +++ +C G + + F I
Sbjct: 262 YTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVSTFCKAGKISQGYEFLDAIS 321
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+ D+ Y F A KK +L L L + M E PD+ N +I C
Sbjct: 322 RDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPDLKIYNVVIRLACRLGETK 381
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A+ + EM+ G P V T+ ++ L + Y +M + P
Sbjct: 382 QAMSLWNEMETGGLSPGVDTFAIMVNGLVGQGLLVEACSYFKDMVGRGLFVAPQYGVLKD 441
Query: 405 LLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
LL +L + E++ + + WE + KG
Sbjct: 442 LLNALVRDEKL--------------------------------ELAKDVWECIASKGCEL 469
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ ++T+ IH LY K +++A Y +M G++P+P T
Sbjct: 470 NVSAWTIWIHALYAKKHVKEACLYCLDMLEAGVMPQPDT 508
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 170/365 (46%), Gaps = 10/365 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A++ F + + G Y P + F + L + + D++ L ++ +YG L+
Sbjct: 139 AFSVFAKILKMG-YVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLI 197
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFG 254
+ A+ + R ++ + ++ +C+ K V E + F E
Sbjct: 198 HGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGIS 257
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ T + +++G+C+LG + +A + +I +PD T+ VNA K GK+ +
Sbjct: 258 PDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTV 317
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M ++G KP+ VT N ++D C K + +A + M G P++ +Y+ +I CK
Sbjct: 318 FDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCK 377
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMST 431
IK+ + EM +KN +P+ +T++ L+ L K + + L+ +M G +
Sbjct: 378 IKKFDEAMNLFKEMHRKN--IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNI 435
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TYN IL DK + + KG PD +Y+++I GL G+LEDA F +
Sbjct: 436 CTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFED 495
Query: 492 MRLKG 496
+ +KG
Sbjct: 496 LLVKG 500
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 161/342 (47%), Gaps = 6/342 (1%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+G R ++L+Q D N Y +++ +V EA +F G D+
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVT 262
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ C ++ A F E D+ T NI++N +C G + E K + ++
Sbjct: 263 YSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM 322
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K +P+ VTY + ++ ++ A +F M + G PD+ + + +I+ C K+
Sbjct: 323 KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFD 382
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA+ + +EM + +P+V TY+SLI L K R+ + +D+M + PN T+N
Sbjct: 383 EAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP--PNICTYNS 440
Query: 405 LLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
+L +L K +V +L + + G + TY++++K + R +E++ KG
Sbjct: 441 ILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKG 500
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D +YT+MI G +G +AL+ +M G +P+ +T
Sbjct: 501 YNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKT 542
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 170/354 (48%), Gaps = 15/354 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++N I+D + + + E +F EM PD+V TY L++ + +++A
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVV---TYSALISGFCILGKLKDA 279
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNG 266
I +F++ D+ F L+ C+ ++ +T F+ K + T N +++G
Sbjct: 280 IDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDG 339
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C++ V +AK + + + PD +Y+ +N K K A+ LF+ M K PD
Sbjct: 340 YCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT + +ID L RI AL+++ +M +RG PN+ TYNS++ LCK +++ L
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLT 459
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+ + K P+ T++ L+K L K E+ V E + G + Y ++++ +
Sbjct: 460 KFKDKGFQ--PDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCV 517
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
++ +ME G PD ++Y ++I L+ K + A EM +G+
Sbjct: 518 EGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 174/358 (48%), Gaps = 37/358 (10%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
I++ + + + EA F + VS+ SP ++A++ + + I +F++M
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSK--GISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288
Query: 183 ----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
PD+ T+ IL+N + ++E VFD + G + + +L+ C K
Sbjct: 289 ENIKPDVY---TFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 239 VEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
V A++ F + + DI++ +I++NG+C + EA +K++ + PD VTY++
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
++ L+K G++ AL+L M ++G P++ T N I+DALC ++ +A+ +L + K++G
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG 465
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN-------------GSCLPNEITFNY 404
P+++TY+ LIK LC+ ++E + +++ K G C+ E FN
Sbjct: 466 FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCV--EGLFN- 522
Query: 405 LLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
E +L +ME NGC TY +I+ D D EM +G+
Sbjct: 523 ---------EALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 175/375 (46%), Gaps = 16/375 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D + A + F + R + +P + FN IL L +++ + ++ + +M P+LVN
Sbjct: 65 DVDDAVSLFNRLLRR-NTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN- 122
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
IL+N + ++ A VF + + G + D F L LC ++ A F +
Sbjct: 123 --CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDK 180
Query: 249 EKN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
F +D + +++G C +G A + + + +P+ V Y T ++++ K
Sbjct: 181 VVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKL 240
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A LF M KG PDVVT + +I C ++ +A+++ +M P+V T+N
Sbjct: 241 VNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNI 300
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMER 424
L+ CK +M+ D M ++ PN +T+N L+ +K+ + + M +
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIK--PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G +Y++++ + D+ + ++EM +K + PD +Y+ +I GL GR+
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISY 418
Query: 485 ALSYFHEMRLKGMVP 499
AL +M +G+ P
Sbjct: 419 ALQLVDQMHDRGVPP 433
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 156/357 (43%), Gaps = 41/357 (11%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
+N +Y + + + V++A+ +F+R F +L L + KH
Sbjct: 48 INFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTV--L 105
Query: 246 FESEKNEF---GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
+ S+K EF ++ NI++N +C LG + A + I+K PD++T+ T L
Sbjct: 106 YLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGL 165
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
KG++ A + G D ++ +I LC AL++L+ + PNV
Sbjct: 166 CLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQK-------------NGSCL------------- 396
YN++I +CK+K + ++ EM K +G C+
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNK 285
Query: 397 -------PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
P+ TFN L+ + K +E V + M + G K + TYN ++ Y
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+K + + M + G+ PD +SY++MI+G + ++A++ F EM K ++P+ T
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 140/280 (50%), Gaps = 34/280 (12%)
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
F LL + R KH + ++ + + FG ++ T+NI++N +C L + A DI
Sbjct: 13 FSKLLTSITRMKHYSTVLSLYK-QMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDI 71
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+K +P + T+ T + L +GK+G AL+LF M +G +PDV+T +I+ LC +++
Sbjct: 72 LKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQL 131
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
EAL + +M +G PN TY+SLI LC + + M + +P+++TFN
Sbjct: 132 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK--IMPDQLTFN 189
Query: 404 YLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
L+ +L K + + DK +EEM ++G+
Sbjct: 190 TLVDALCKEGMIQIM-----------------------------DKAMGLFEEMSQQGLI 220
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
PD +Y +IHGL GRL DA++ FHEM + G +P+ T
Sbjct: 221 PDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVT 260
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 165/351 (47%), Gaps = 15/351 (4%)
Query: 154 PGSNV-FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIG 209
P S V F+ +L + R + + ++ ++ +M N T IL+N + + + A
Sbjct: 7 PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFS 66
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWC 268
V + G + F L+ LC + A F+ E F D+ T ++NG C
Sbjct: 67 VLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLC 126
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+ EA + D++ P++ TY++ ++ L G A+RLF AM + PD +
Sbjct: 127 KDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQL 186
Query: 329 TCNCIIDALCFKKRIP---EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
T N ++DALC + I +A+ + EM +G +P+ TYN+LI LC + R+
Sbjct: 187 TFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALF 246
Query: 386 DEMEQKNGSCLPNEIT----FNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
EM +P+ +T F+YL K+ + E + +L+ +E Y++++
Sbjct: 247 HEMVVYGQ--IPDLVTYRILFDYLCKNHRLAEAM-VLLKVIEGTNLDPDIHIYSIVMDGM 303
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ R + ++ KG+ PD R+YT+MI+GL +G L +A F EM
Sbjct: 304 CRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 354
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 137/322 (42%), Gaps = 56/322 (17%)
Query: 119 TLTDDLIVNV---INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVEL 175
T T ++++N +NR F A++ + + G Y P + F ++ L + E
Sbjct: 45 TYTLNILINSFCHLNRLGF----AFSVLGDILKLG-YQPSTATFTTLIRGLCVEGKIGEA 99
Query: 176 IQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL 229
+Q+FD+M PD++ TYG L+N + EA+ +F G + + +L
Sbjct: 100 LQLFDKMTGEGFQPDVL---TYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSL 156
Query: 230 LLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVY---EAKRFWKDIIK 285
+ LC H E F+ + D T N +++ C G + +A ++++ +
Sbjct: 157 IHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQ 216
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
PD+VTY T ++ L G+L A+ LF M G+ PD+VT + D LC R+ E
Sbjct: 217 QGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAE 276
Query: 346 ALEVLR-----------------------------------EMKNRGCLPNVTTYNSLIK 370
A+ +L+ ++ ++G P+V TY +I
Sbjct: 277 AMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMIN 336
Query: 371 HLCKIKRMETVYEYLDEMEQKN 392
LC+ + + EM++ +
Sbjct: 337 GLCQQGLLAEASKLFGEMDEND 358
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 17/171 (9%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
+ A F+ +S++G P + +N ++ L R + I +F EM PDLV
Sbjct: 204 MDKAMGLFEEMSQQG-LIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLV--- 259
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFFES 248
TY IL + H + EA+ V + E LD D+ + ++ +CR +E A F
Sbjct: 260 TYRILFDYLCKNHRLAEAM-VLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSK 318
Query: 249 EKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
++ D++T I++NG C G + EA + + ++ ++ E +Y+TF
Sbjct: 319 LSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIE----SYSTF 365
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 163/346 (47%), Gaps = 40/346 (11%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
N L++L RA + + +Q+F E + NE TYG L++ A +++A + D ++ G
Sbjct: 1 MNCALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRG 60
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKR 278
+ N ++ G C G +A
Sbjct: 61 ----------------------------------IPPGVAVHNGVIRGLCKAGRFGDALG 86
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK-PDVVTCNCIIDAL 337
++K + +KC PD +T+ V+AL K G++ A ++F++M + P+VVT +I+ L
Sbjct: 87 YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C ++ A+E+L M GC PNV TY+ L++ LCK R + + L EM ++ P
Sbjct: 147 CKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ--P 204
Query: 398 NEITFNYLLKSLKKPEEVPWVLERME---RNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+ I +N LL L K + LE ++ R+GC + TYN +++L+ D+
Sbjct: 205 DVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLI 264
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ M ++G PD +Y +I GL RL+DA + +M VP+
Sbjct: 265 QVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPD 310
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 167/379 (44%), Gaps = 23/379 (6%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E P ++ +++ L +A R + + EM PD++ Y LLN +
Sbjct: 164 ETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI---MYNTLLNGLCKSR 220
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDIKTM 260
++EA+ + G + + +L+ CR K V+ A + SE+ D+
Sbjct: 221 RLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG-CPPDVINY 279
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG------KLGTALRL 314
N ++ G C + +A+ K ++ ++C PD +TY+T ++ L K KL A +
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEI 339
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+ M + G P+ T +I+ LC ++ +AL +LR M + +P++++++ +I LCK
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER--NGCKMSTD 432
++ Y+ M ++ C PN + + L+ L K EV + E +
Sbjct: 400 SHDLDAAYKIFGMMSERE--CKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVA 457
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TYN +L ++ E M K PD SY +I GL +E+A F +
Sbjct: 458 TYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAV 517
Query: 493 RLKGMVPEPRT-GILVNDM 510
KG E +LVN++
Sbjct: 518 EAKGFAMEVGVYNVLVNEL 536
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 12/235 (5%)
Query: 131 RYRFDW--EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------ 182
R DW EAA + + + G P + + +++ L RAR+ + + + M
Sbjct: 326 RVDADWKLEAACEILEMMKQTG-CPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVV 384
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PDL ++ +++ +H ++ A +F E + A+ L+ L + V+ A
Sbjct: 385 PDL---SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441
Query: 243 ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
FE F + T N +L+G C +G + EA R + +I +C PD +Y + L
Sbjct: 442 VRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+ + A LFQA+ KG +V N +++ LC KKR+ +A V ++ G
Sbjct: 502 CRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 123/292 (42%), Gaps = 53/292 (18%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+ + +S G P +N ++ L R R + + +M PD++ TY
Sbjct: 260 AFRLIQVMSERG-CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVI---TYS 315
Query: 193 ILLN------RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
+++ R A +E A + + K+ G + + ++ LCR + + A
Sbjct: 316 TIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALL 375
Query: 247 ESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+E D+ + ++++ C ++ A + + + + +C+P+ V YA ++ L+K
Sbjct: 376 RRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKG 435
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN---- 361
G++ A+R+F+ M E R P V T N ++D LC RI EA+ ++ M ++ C P+
Sbjct: 436 GEVDKAVRVFELMVESFR-PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASY 494
Query: 362 -------------------------------VTTYNSLIKHLCKIKRMETVY 382
V YN L+ LCK KR+ +
Sbjct: 495 GALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAH 546
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 170/355 (47%), Gaps = 12/355 (3%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P +N ++D L +A + + ++ EM PD V T+ +++ A E
Sbjct: 7 APDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTV---TFNSIMDGLCKAGKFER 63
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
A + E + L+ LC+ ++V+ A+T E + F D+ T +I+ +
Sbjct: 64 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILAD 123
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G + EA K++ + C P+ VTY T ++ L K K A L + + G P
Sbjct: 124 GLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVP 183
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DVVT I+D LC + R+ +AL+++ M RGC P+V TY +L++ LC+ R++ +
Sbjct: 184 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 243
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
EM K+ C + + + L+ K + ++ D YN ++ Y
Sbjct: 244 KEMVSKD--CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEG 301
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D++ + +E+M +G P+ ++Y +++ GL G++++A + M G VP+
Sbjct: 302 RLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 356
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 162/358 (45%), Gaps = 12/358 (3%)
Query: 153 SPGSNVFNAILDVLGRARRFV---ELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIG 209
+P + FN+I+D L +A +F L+ V E + TY L++ V+ A
Sbjct: 42 TPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKT 101
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+ D G + D+ + L LC+ ++ A E E N ++ T N +++G C
Sbjct: 102 LVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLC 161
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+A + ++ S PD VTY V+ L K+G+L AL++ + M ++G P V+
Sbjct: 162 KASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI 221
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +++ LC R+ EA + +EM ++ C + Y SL+ CK R + + +D +
Sbjct: 222 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI 281
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
P +N L+ K +E+P V E M GC + TYN+++
Sbjct: 282 RGT-----PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHG 336
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ E M G PD SY ++I GL+ + ++A +M G+ P+ T
Sbjct: 337 KVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVT 394
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 170/380 (44%), Gaps = 41/380 (10%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P +V+NA++D + R E+ VF++M + N KTY I+++ V+EA
Sbjct: 284 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 343
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
+ G + D+ ++ ++ L + K E + + + D T N ++ +C
Sbjct: 344 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 403
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+A K++IK+ +PD+VTY T ++ L++ +LG A L M G
Sbjct: 404 KEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSAC 463
Query: 329 TC-NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T N IID LC + + +AL ++ M G N TYN I LCK R++ L E
Sbjct: 464 TTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSE 523
Query: 388 ME--------------------------------QKNGSCLPNEITFNYLLKSL---KKP 412
M+ G C+ + TFN L+ + K+
Sbjct: 524 MDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH-TFNLLIDAFTKTKRL 582
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+E +LE M + GC S TYN+++ D DK ++EM +G+ SYTV+
Sbjct: 583 DEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVL 642
Query: 473 IHGLYDKGRLEDALSYFHEM 492
I+GL +GR ++AL EM
Sbjct: 643 IYGLCGQGRGKEALQVLEEM 662
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 170/375 (45%), Gaps = 15/375 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P + A+++ L R R E +F EM + Y L+N Y + +EA
Sbjct: 217 TPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK 276
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWC 268
V D + +D + L+ C+ + E+ F + +IKT NI+++G C
Sbjct: 277 VVDGIRGTPYID---VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLC 333
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G V EA F + + + C PD V+Y ++ L K K A ++ M + G PD V
Sbjct: 334 KHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAV 393
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N ++ C ++R +A+ +L+ M G P+ TYN+LI L + R+ YE + EM
Sbjct: 394 TYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 453
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+NG + T+N ++ L K ++ +++ M +G + +T TYN+ +
Sbjct: 454 -LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEG 512
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM-RLKGMVPEPRTG 504
D+ EM+ D+ SYT +I GL +L+ A EM +KG+ T
Sbjct: 513 RLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTF 569
Query: 505 ILVNDMNIKLKERGE 519
L+ D K K E
Sbjct: 570 NLLIDAFTKTKRLDE 584
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
K PD TY ++ L K K A + M ++G PD VT N I+D LC + A
Sbjct: 5 KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 64
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
+L M R C P+ TYN+LI LCK + ++ +DE +P+ +T++ L
Sbjct: 65 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGF--VPDVVTYSILA 122
Query: 407 KSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
L K +E +++ M NGC + TYN ++ +K E + G
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
PD +YT+++ GL +GRL+ AL M +G P
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTP 218
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 135/301 (44%), Gaps = 21/301 (6%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNE---- 188
RFD A K + + G P + +N ++ L + R + ++ EM L N
Sbjct: 407 RFD--DAVGILKNMIKAG-VDPDNVTYNTLISGLSQTNRLGDAYELMHEM--LRNGCVVS 461
Query: 189 --KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
TY +++R +++A+ + D G + + + LC+ ++ A +
Sbjct: 462 ACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLL 521
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK--CEPDSVTYATFVNALTK 304
SE + ++ +I+ G C + A + ++++ K C S T+ ++A TK
Sbjct: 522 -SEMDTLRDEVSYTTVII-GLCKAEQLDRASKLAREMVAVKGLC-ITSHTFNLLIDAFTK 578
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
+L AL L + M ++G P V+T N +I LC ++ +A E+ EM RG + + +
Sbjct: 579 TKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVS 638
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLER 421
Y LI LC R + + L+EM + C +++ L +L+ + EE +L R
Sbjct: 639 YTVLIYGLCGQGRGKEALQVLEEMASSD--CEIDDLKCRKLYLALRGQGRGEEAAELLRR 696
Query: 422 M 422
M
Sbjct: 697 M 697
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 198/453 (43%), Gaps = 45/453 (9%)
Query: 69 LVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNV 128
L+ SL + + E +R GD +S++G + +T +++N
Sbjct: 78 LIDSLCKAGDLEEARRLHGD--------------MSSRGCVPN-------VVTYSVLING 116
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------ 182
+ + EA + + D P +N+ LD L + E ++ +
Sbjct: 117 LCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 176
Query: 183 --PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
PD V T+ L++ ++EA VFD G + ++ + L+ LC+ +E
Sbjct: 177 VSPDTV---TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKME 233
Query: 241 VAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP-----DSVT 294
A ES ++ D+ T +++++ +C V EA + C P D VT
Sbjct: 234 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVT 293
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
+ + K G A LF+ M K +PDV+T +ID LC ++ A ++L M
Sbjct: 294 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 353
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KK 411
N G PNV TYN+L+ LCK R+E ++L+EM C+P+ IT+ L+ +L +
Sbjct: 354 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG--CVPDSITYGSLVYALCRASR 411
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
++ ++ ++ G T TYN+++ L+ + E + EEM KG PD ++
Sbjct: 412 TDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAIT-VLEEMVGKGHQPDSFTFA 470
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
GL+ G L + + KGM+P+ T
Sbjct: 471 ACFSGLHRSGNLAGTMELLRVVLAKGMLPDATT 503
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 129/248 (52%), Gaps = 10/248 (4%)
Query: 261 NIILNGWCVLGNVYEAKRFWK-DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
NI+L C G+ A ++ ++ + P VTY T +N L K LG + LF+ +
Sbjct: 5 NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
E+G PDVVT N +ID+LC + EA + +M +RGC+PNV TY+ LI LCK+ R++
Sbjct: 65 ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRID 124
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME--RNGC-KMSTDTYNV 436
E + EM +K+ LPN IT+N L L K E M R+G ++S DT V
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT--V 182
Query: 437 ILKLYVNWDCE----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
++ C+ D+ +++M G P+ +Y +++GL ++E A + M
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 242
Query: 493 RLKGMVPE 500
KG+ P+
Sbjct: 243 VDKGVTPD 250
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 136/284 (47%), Gaps = 7/284 (2%)
Query: 223 LSAFQNLLLWLCRYKHVEVAETFFESE--KNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
++ + +L LCR A F E ++ I T N I+NG C ++ +
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+++++ PD VTY T +++L K G L A RL M +G P+VVT + +I+ LC
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 341 KRIPEALEVLREMKNRGC--LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
RI EA E+++EM + C LPN+ TYNS + LCK E + + + P+
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 399 EITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+TF+ L+ L K +E V + M G + TYN ++ D ++ E
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
M KG+ PD +Y+V++ R+++AL H M +G P
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 284
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 126/298 (42%), Gaps = 47/298 (15%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-------LVNEK 189
E A+ + + +G +P ++ ++D +A R E +++ M LV +K
Sbjct: 233 ERAHAMIESMVDKG-VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDK 291
Query: 190 -TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
T+ IL+ A E+A +F+ D+ F L+ LC+ VE A +
Sbjct: 292 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 351
Query: 249 EKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC------------------ 288
N G ++ T N +++G C G + EA +F ++++ S C
Sbjct: 352 MGN-LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRAS 410
Query: 289 -----------------EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+PD+VTY V+ L K GK A+ + + M KG +PD T
Sbjct: 411 RTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFA 470
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
L + +E+LR + +G LP+ TT +S++ +C+ +++ V + E E
Sbjct: 471 ACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 174/365 (47%), Gaps = 15/365 (4%)
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRY 198
WV + D P N +LD L + RF + +V+ +M P++V TYG L++
Sbjct: 147 WVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVV---TYGTLIDGC 203
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDI 257
+A +FD E + + L+ LC + AE+ F + +N ++
Sbjct: 204 CRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNL 263
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T N +++G+C + +V +A +++++ P+ VT+ ++ L K ++ +A +
Sbjct: 264 YTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLID 323
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M G P++ NC+ID C + EAL + E++ LP+V TY+ LIK LC + R
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTY 434
ME L EM++K LPN +T+N L+ K E+ V +M G + + T+
Sbjct: 384 MEEADGLLQEMKKKGF--LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITF 441
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+ ++ Y + + EM KG+ PD +YT +I G + G ++A EM+
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Query: 495 KGMVP 499
G+ P
Sbjct: 502 AGLHP 506
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 167/392 (42%), Gaps = 66/392 (16%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV-------ELIQ-------------V 178
A F VSR D + +++AI+ VL A+ + +LIQ V
Sbjct: 53 ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSV 112
Query: 179 FDEMPDLVNEK----TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
F+ + L + K +G+L+ ++ +VEEA+ V+ + +D L A Q
Sbjct: 113 FNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYK------MDVLPAMQ------- 159
Query: 235 RYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
N++L+G G + + D++ P+ VT
Sbjct: 160 ------------------------ACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVT 195
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y T ++ ++G A RLF M EK P VV +I LC + RI EA + R M+
Sbjct: 196 YGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMR 255
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
N G LPN+ TYN+++ CKI ++ E EM LPN +TF L+ L K +E
Sbjct: 256 NSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM--LGDGLLPNVVTFGILIDGLCKTDE 313
Query: 415 VPWV---LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
+ L M G + YN ++ Y + E+EK + PD +Y++
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSI 373
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+I GL R+E+A EM+ KG +P T
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 175/399 (43%), Gaps = 27/399 (6%)
Query: 103 VSTKGEIEKALNQCELTLTDDLIVNVINRYRFD--WEAAYTFFKWVSREGDYSPGSNVFN 160
V K ++ A+ C + L ++ + RFD W+ + V+R SP +
Sbjct: 148 VYYKMDVLPAMQACNMVLD-----GLVKKGRFDTMWK---VYGDMVARGA--SPNVVTYG 197
Query: 161 AILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
++D R F++ ++FDEM P +V Y IL+ + EA +F
Sbjct: 198 TLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV---IYTILIRGLCGESRISEAESMFRTM 254
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
+ G L +L + ++ C+ HV+ A E + E + ++ T I+++G C +
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
A++F D+ P+ Y ++ K G L AL L + + PDV T + +
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I LC R+ EA +L+EMK +G LPN TYN+LI CK ME E +M +K
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434
Query: 394 SCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
PN ITF+ L+ K E + M G Y ++ + +
Sbjct: 435 E--PNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA 492
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+EM++ G+ P+ + + +I GL GR+ DA+ F
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 92/216 (42%), Gaps = 15/216 (6%)
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L++ Y+A V +A +FD E + +S + ++ + + + F + + ++
Sbjct: 672 LISMYSATGNVADAHNMFD---EIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDV 728
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
DI T+ + L+ LG + + I + D + +N +K G++GTA R
Sbjct: 729 QPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARR 788
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL-PNVTTYNSLIKHL 372
+ P+ VT ++ A + E + R MK L P ++ + ++ L
Sbjct: 789 FSLVL------PNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLL 842
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
C+ + YE++ +M + PN + + LL +
Sbjct: 843 CRAGLLTEAYEFILKMPVR-----PNAVVWRTLLGA 873
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 163/346 (47%), Gaps = 40/346 (11%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
N L++L RA + + +Q+F E + NE TYG L++ A +++A + D ++ G
Sbjct: 1 MNCALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRG 60
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKR 278
+ N ++ G C G +A
Sbjct: 61 ----------------------------------IPPGVAVHNGVIKGLCKAGRFGDALG 86
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR-KPDVVTCNCIIDAL 337
++K + +KC PD +T+ V+AL K G++ A ++F++M + P+VVT +I+ L
Sbjct: 87 YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C ++ A+E+L M GC PNV TY+ L++ LCK R + + L EM ++ P
Sbjct: 147 CKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ--P 204
Query: 398 NEITFNYLLKSLKKPEEVPWVLERME---RNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+ I +N LL L K + LE ++ R+GC + TYN +++L+ D+
Sbjct: 205 DVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLI 264
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ M ++G PD +Y +I GL RL+DA + +M VP+
Sbjct: 265 QVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPD 310
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 167/379 (44%), Gaps = 23/379 (6%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E P ++ +++ L +A R + + EM PD++ Y LLN +
Sbjct: 164 ETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI---MYNTLLNGLCKSR 220
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDIKTM 260
++EA+ + G + + +L+ CR K V+ A + SE+ D+
Sbjct: 221 RLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG-CPPDVINY 279
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG------KLGTALRL 314
N ++ G C + +A+ K ++ ++C PD +TY+T ++ L K KL A +
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEI 339
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+ M + G P+ T +I+ LC ++ +AL +LR M + +P++++++ +I LCK
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER--NGCKMSTD 432
++ Y+ M ++ C PN + + L+ L K EV + E +
Sbjct: 400 SHDLDAAYKIFGMMSERE--CKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVA 457
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TYN +L ++ E M K PD SY +I GL +E+A F +
Sbjct: 458 TYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAV 517
Query: 493 RLKGMVPEPRT-GILVNDM 510
KG E +LVN++
Sbjct: 518 EAKGFAMEVGVYNVLVNEL 536
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 12/235 (5%)
Query: 131 RYRFDW--EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------ 182
R DW EAA + + + G P + + +++ L RAR+ + + + M
Sbjct: 326 RVDADWKLEAACEILEMMKQTG-CPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVV 384
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PDL ++ +++ +H ++ A +F E + A+ L+ L + V+ A
Sbjct: 385 PDL---SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441
Query: 243 ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
FE F + T N +L+G C +G + EA R + +I +C PD +Y + L
Sbjct: 442 VRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+ + A LFQA+ KG +V N +++ LC KKR+ +A V ++ G
Sbjct: 502 CRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 123/292 (42%), Gaps = 53/292 (18%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+ + +S G P +N ++ L R R + + +M PD++ TY
Sbjct: 260 AFRLIQVMSERG-CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVI---TYS 315
Query: 193 ILLN------RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
+++ R A +E A + + K+ G + + ++ LCR + + A
Sbjct: 316 TIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALL 375
Query: 247 ESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+E D+ + ++++ C ++ A + + + + +C+P+ V YA ++ L+K
Sbjct: 376 RRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKG 435
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN---- 361
G++ A+R+F+ M E R P V T N ++D LC RI EA+ ++ M ++ C P+
Sbjct: 436 GEVDKAVRVFELMVESFR-PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASY 494
Query: 362 -------------------------------VTTYNSLIKHLCKIKRMETVY 382
V YN L+ LCK KR+ +
Sbjct: 495 GALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAH 546
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 188/419 (44%), Gaps = 82/419 (19%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM----------PDLVNEKTYGILLNRYAAAHM 203
P FN+ + L RA + E ++F +M P++V T+ ++L + M
Sbjct: 252 PDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVV---TFNLMLKGFCQEGM 308
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKNEFGYDI 257
+EEA + + K+ G L ++ LL L R + + + E N + Y+I
Sbjct: 309 MEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNI 368
Query: 258 K------------------------------TMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
T +L+G+C G V+EAK ++I+
Sbjct: 369 VMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKG 428
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
C P++ T T +N+L K+G+ A + Q M EK + D VTCN +++ LC + +A
Sbjct: 429 CHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKAS 488
Query: 348 EVLREMKNRGC----------------------LPNVTTYNSLIKHLCKIKRMETVYEYL 385
EV+ EM G +P+V TY +LI LCK+ ++E +
Sbjct: 489 EVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKF 548
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYV 442
EM KN P+ +T++ + + K ++ VL+ MERNGC + TYN L +
Sbjct: 549 IEMMAKN--LHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYN---SLIL 603
Query: 443 NWDCEDKVRHTW---EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ ++ + +EM ++G+ PD +Y MI+ L + G+ +DA S HEM KG+V
Sbjct: 604 GLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVV 662
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 162/371 (43%), Gaps = 42/371 (11%)
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
GR ++ +E + +M VN Y L++ + M +EA + +R E G L D+ F
Sbjct: 200 GRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTF 257
Query: 227 QNLLLWLCRYKHVEVAETFFESEK--NEFGY---DIKTMNIILNGWCVLGNVYEAKRFWK 281
+ + LCR V A F + E G ++ T N++L G+C G + EA+ +
Sbjct: 258 NSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVE 317
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+ K +Y T++ L + GKL + M E G +P++ + N ++D LC
Sbjct: 318 TMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNH 377
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ +A ++ M + G P+ TY +L+ C ++ L+EM +K C PN T
Sbjct: 378 MMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRK--GCHPNTYT 435
Query: 402 FNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED----KVRHTW 454
N LL SL + E +L++M ++ T T N++ VN C + K
Sbjct: 436 CNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIV----VNGLCRNGELEKASEVV 491
Query: 455 EEMEKKGMG----------------------PDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
EM G PD +YT +I+GL G+LE+A F EM
Sbjct: 492 SEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEM 551
Query: 493 RLKGMVPEPRT 503
K + P+ T
Sbjct: 552 MAKNLHPDSVT 562
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 8/282 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ T ++NG C +G + EAK+ + +++ PDSVTY TFV K+GK+ +ALR+
Sbjct: 524 DVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVL 583
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ M G + T N +I L K +I E ++ EM+ RG P++ TYN++I LC+
Sbjct: 584 KDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEG 643
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME--RNGCKMSTDT 433
+ + L EM K G PN +F L+K+ K + E + + C
Sbjct: 644 GKTKDATSLLHEMLDK-GVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEAL 702
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y+++ + + +E ++ + Y +I L GRL+DA ++
Sbjct: 703 YSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLI 762
Query: 494 LKGMVPEPRTGILVNDMNIKLKERG--EQGKKVIKLTSLGLK 533
KG + + I V D L +RG +Q ++ ++ L L+
Sbjct: 763 DKGYCFDHSSFIPVID---GLSKRGNKQQADELGRIMELALE 801
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 40/264 (15%)
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
+ D+I++ P++ T+ + +L + L A LF M EKG +P+ T ++ C
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197
Query: 339 FKKRIPEALE---------------------------------VLREMKNRGCLPNVTTY 365
R +ALE ++ M +G LP+V T+
Sbjct: 198 RAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTF 257
Query: 366 NSLIKHLCKIKRM-ETVYEYLD-EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLE 420
NS I LC+ ++ E + D +M+ + G PN +TFN +LK + EE ++E
Sbjct: 258 NSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVE 317
Query: 421 RMERNGCKMSTDTYNV-ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
M++ G +S ++YN +L L N + R +EM + G+ P+ SY +++ GL
Sbjct: 318 TMKKGGNFVSLESYNTWLLGLLRNGKLLEG-RSVLDEMVENGIEPNIYSYNIVMDGLCRN 376
Query: 480 GRLEDALSYFHEMRLKGMVPEPRT 503
+ DA M G+ P+ T
Sbjct: 377 HMMLDARRLMDLMVSNGVYPDTVT 400
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+M G P T+N LI+ LC+ ++ E D+M +K C PN+ T L++ +
Sbjct: 141 DMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEK--GCQPNKFTVGILVRGFCR 198
Query: 412 PEEVPWVLERME-RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
LE ++ + G ++ YN ++ + D D+ E M +KG+ PD ++
Sbjct: 199 AGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFN 258
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQG 521
I L G++ +A F +M++ G + P+ ++ N+ LK ++G
Sbjct: 259 SRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVT--FNLMLKGFCQEG 307
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 97/224 (43%), Gaps = 11/224 (4%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTY 191
+A K + R G S +N+++ LG + E+ + DEM PD+ TY
Sbjct: 578 SALRVLKDMERNG-CSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDIC---TY 633
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFFESEK 250
++N ++A + + G + ++S+F+ L+ C+ +VA F+
Sbjct: 634 NNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVAL 693
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ G+ +++ N G + +AK ++ ++ + Y ++ L K G+L
Sbjct: 694 SVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDD 753
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
A L Q + +KG D + +ID L + +A E+ R M+
Sbjct: 754 AHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIME 797
>gi|357117116|ref|XP_003560320.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Brachypodium distachyon]
Length = 598
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 3/281 (1%)
Query: 238 HVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
HV AE E + I+ +L GWC LG + EAK + + PD V + T
Sbjct: 172 HVAAAERLVEELQPRLPLSIRHYTALLYGWCRLGKLDEAKHVLARMKAAGVAPDVVVFNT 231
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+ + A L + M + P+ V+ ++ L + R+ E + V EM+ +G
Sbjct: 232 LLAGFVAADRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSRGRVDEVMRVFVEMRRKG 291
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP--EEV 415
C P+ TY +L+ CK R+ YE+LD M + P + + + KK EE
Sbjct: 292 CAPDSVTYGTLVSAFCKAGRLSQGYEFLDAMSRDALRVDPG-VYLGFFVAHEKKEQLEEC 350
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
++ERM C YNV+L+L + W EME G+ P ++ +M++G
Sbjct: 351 LELMERMRECRCPPDLGIYNVVLRLSCKLGETKQAMALWNEMENSGLSPGVDTFAIMVNG 410
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKE 516
L +G L DA S+F +M +G+ P+ G+L + +N +++
Sbjct: 411 LVGQGSLVDACSFFKDMVGRGLFVAPQYGVLKDLLNALVRD 451
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 141/371 (38%), Gaps = 72/371 (19%)
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
A R VE +Q +P ++ + Y LL + ++EA V R K G D+ F
Sbjct: 176 AERLVEELQ--PRLP--LSIRHYTALLYGWCRLGKLDEAKHVLARMKAAGVAPDVVVFNT 231
Query: 229 LLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
LL E A E E E+ + + + ++ G G V E R + ++ +
Sbjct: 232 LLAGFVAADRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSRGRVDEVMRVFVEMRRKG 291
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAM----------------------------- 318
C PDSVTY T V+A K G+L AM
Sbjct: 292 CAPDSVTYGTLVSAFCKAGRLSQGYEFLDAMSRDALRVDPGVYLGFFVAHEKKEQLEECL 351
Query: 319 --WEKGRK----PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
E+ R+ PD+ N ++ C +A+ + EM+N G P V T+ ++ L
Sbjct: 352 ELMERMRECRCPPDLGIYNVVLRLSCKLGETKQAMALWNEMENSGLSPGVDTFAIMVNGL 411
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD 432
+ + +M + P LL +L + E++ +++ D
Sbjct: 412 VGQGSLVDACSFFKDMVGRGLFVAPQYGVLKDLLNALVRDEKL------------ELAKD 459
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ I V+ CE V ++T+ IH LY K ++DA SY +M
Sbjct: 460 VWGCI----VSRGCELNV----------------GAWTIWIHALYAKKHVKDACSYCLDM 499
Query: 493 RLKGMVPEPRT 503
G++P+P T
Sbjct: 500 LEAGLMPQPDT 510
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 172/362 (47%), Gaps = 15/362 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + E + + D M P+LV TYG+++N
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV---TYGVVVNGLCKRG 239
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
++ A + ++ + ++ + ++ LC+Y+H + A F E E ++ T +
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ C +A R D+I+ K P+ VT+ ++A K+GKL A +L+ M ++
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
PD+ T + +I+ C R+ EA + M ++ C PNV TYN+LI CK KR++
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
E EM Q+ + N +T+ L+ + + V ++M +G + TYN +L
Sbjct: 420 VELFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+K +E +++ M P +Y +MI G+ G++ED F + LKG+
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 499 PE 500
P+
Sbjct: 538 PD 539
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 168/354 (47%), Gaps = 13/354 (3%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
FN +L + + ++F +I + ++M L N TY IL+N + + A+ + +
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G + +LL C K + A + + E GY D T +++G +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVD-QMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA +++ C+P+ VTY VN L K+G + A L M + +VV + +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
ID+LC + +AL + EM+N+G PNV TY+SLI LC +R L +M ++
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD----TYNVILKLYVNWDCEDK 449
+ PN +TFN L+ + K ++ E++ K S D TY+ ++ + D D+
Sbjct: 327 N--PNVVTFNALIDAFVKEGKLVEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+H +E M K P+ +Y +I+G R+++ + F EM +G+V T
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 140/301 (46%), Gaps = 6/301 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+++AIG+F + L + F LL + + K ++ + E ++ +++ T NI
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++N +C + A ++K EP VT ++ +N ++ A+ L M E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+PD +T +I L + EA+ ++ M RGC PN+ TY ++ LCK ++ +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILK 439
L++ME N + ++ ++ SL K ++ + ME G + + TY+ ++
Sbjct: 246 NLLNKMEA--AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
N++ +M ++ + P+ ++ +I +G+L +A + EM + + P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 500 E 500
+
Sbjct: 364 D 364
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 109/229 (47%), Gaps = 10/229 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P FNA++D + + VE +++DEM PD+ TY L+N + ++E
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF---TYSSLINGFCMHDRLDE 383
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILN 265
A +F+ ++ + L+ C+ K + E E F E + + T +++
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ + A+ +K ++ P+ +TY T ++ L K GKL A+ +F+ + +P
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+ T N +I+ +C ++ + ++ + +G P+V YN++I C+
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Query: 164 DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
D L A+ EL+ D P++V TY L+N + A ++E + +F + G + +
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVV---TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ L+ + + + A+ F+ ++ + +I T N +L+G C G + +A ++
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ +SK EP TY + + K GK+ LF ++ KG KPDV+ N +I C K
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 343 IPEALEVLREMKNRGCLPNVTT 364
EA + R+M+ G LP+ T
Sbjct: 556 KEEADALFRKMREDGPLPDSGT 577
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 93/233 (39%), Gaps = 44/233 (18%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
KL A+ LF M + P + N ++ A+ K+ + + +M+ G N+ TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQ-------------KNGSC------------------ 395
LI C+ ++ L +M + NG C
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 396 --LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE--- 447
P+ ITF L+ L K E +++RM + GC+ + TY V+ VN C+
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV----VNGLCKRGD 240
Query: 448 -DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D + +ME + + Y+ +I L +DAL+ F EM KG+ P
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 166/336 (49%), Gaps = 9/336 (2%)
Query: 168 RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
RA F+ + PDLV T+ LL+ + + +E+A+ +FD+ G ++ +
Sbjct: 135 RASCFLGKMMKLGFEPDLV---TFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYT 191
Query: 228 NLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
L+ LC+ +H+ A E F + N ++ T N +++G C +G +A +D++K
Sbjct: 192 TLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKR 251
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
+P+ +T+ ++A K GK+ A L++ M + PDV T +I+ LC R+ EA
Sbjct: 252 GIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEA 311
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
++ M++ G PN TY +LI CK KR+E + EM QK + N IT+ L+
Sbjct: 312 RQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQK--GLVANTITYTVLI 369
Query: 407 KS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
+ + +P+ V +M TYNV+L +K ++ M K+ M
Sbjct: 370 QGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMD 429
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +YT++I G+ G++EDA F + KGM P
Sbjct: 430 INIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKP 465
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 140/303 (46%), Gaps = 8/303 (2%)
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNII 263
EA+ +F R L + F LL + + K +V + FE + G + T NI+
Sbjct: 65 EALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFE-QMQILGISPVLYTCNIV 123
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N C A F ++K EPD VT+ + ++ ++ AL LF + G
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+P+VVT +I LC + + A+E+ +M + G PNV TYNSL+ LC+I R
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
L +M ++ PN ITF L+ + + K E + + M + TY ++
Sbjct: 244 LLRDMMKRGIQ--PNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ D+ R + ME G P++ +YT +IHG R+ED F+EM KG+V
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVAN 361
Query: 501 PRT 503
T
Sbjct: 362 TIT 364
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 164/372 (44%), Gaps = 19/372 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILL 195
W A++ ++ + R G ++ FN LD+ R L + D + LL
Sbjct: 43 WIRAFSNYRKILRNGLHNLQ---FNEALDLFTRMVHSRPLPSIVD----------FTRLL 89
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFG 254
+ A + I +F++ + G L ++ +CR A F + K F
Sbjct: 90 SVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFE 149
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ T +L+G+C + +A + I+ P+ VTY T ++ L K L A+ +
Sbjct: 150 PDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEI 209
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M + G +P+VVT N ++ LC R +A +LR+M RG PNV T+ +LI K
Sbjct: 210 FNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVK 269
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMST 431
+ ++ E M Q S P+ T+ L+ L + +E + ME NG +
Sbjct: 270 VGKIMEAKELYKVMIQM--SVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNE 327
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TY ++ + + + EM +KG+ + +YTV+I G GR + A F++
Sbjct: 328 VTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQ 387
Query: 492 MRLKGMVPEPRT 503
M + P+ RT
Sbjct: 388 MGSRRAPPDIRT 399
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 4/212 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + A+++ L R E Q+F M NE TY L++ + + VE+ +
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCV 269
F + G + + + L+ C +VA E F + DI+T N++L+G C
Sbjct: 350 FYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCY 409
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G V +A +K + K + + + VTY + + K GK+ A LF +++ KG KP+V+T
Sbjct: 410 NGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVIT 469
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+I C + I EA + ++MK G LPN
Sbjct: 470 YTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 7/268 (2%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDV---LGRARRFVELIQVFDEMPDLVNEKTYG 192
W A + + + G P F A++D +G+ EL +V +M + TY
Sbjct: 238 WSDAAWLLRDMMKRG-IQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYT 296
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
L+N ++EA +F + G + + L+ C+ K VE + F+E +
Sbjct: 297 ALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQK 356
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T +++ G+C++G A+ + + + PD TY ++ L G + A
Sbjct: 357 GLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKA 416
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L +F+ M ++ ++VT II +C ++ +A ++ + ++G PNV TY ++I
Sbjct: 417 LMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 476
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNE 399
C+ + +M K LPNE
Sbjct: 477 FCRRGFIHEADALFKKM--KEDGFLPNE 502
>gi|15239018|ref|NP_196692.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174149|sp|Q9LFM6.1|PP375_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g11310, mitochondrial; Flags: Precursor
gi|8953393|emb|CAB96666.1| putative protein [Arabidopsis thaliana]
gi|110738090|dbj|BAF00978.1| hypothetical protein [Arabidopsis thaliana]
gi|332004275|gb|AED91658.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 215/457 (47%), Gaps = 28/457 (6%)
Query: 94 VQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS 153
+ N+L+ V +E AL++ + + +L+ + +R ++ FKW + ++
Sbjct: 73 ISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFT 132
Query: 154 PGSNVFNAILDVLGRARRF-VELIQVF-----DEMPDLVNEKTYGILLNRYAAAHMVEEA 207
++F+++++ L +AR F + VF DE +LV+ T+ +L+ RYA A MV++A
Sbjct: 133 LSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQA 192
Query: 208 IGVFDRRKEFGEL----DDLSAFQNLLLWLCRYKHVEVAETFFE----SEKNEFGYDIKT 259
I F+ + + + +L + LL LC+ HV A + E + + + ++
Sbjct: 193 IRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRI 252
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
NI+LNGW + +A++ W+++ +P VTY T + + ++ A+ + + M
Sbjct: 253 FNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMK 312
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
+ + + N IID L R+ EAL ++ P + TYNSL+K+ CK +
Sbjct: 313 MAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLP 372
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNV 436
+ L M + P T+N+ K K EE + ++ G TY++
Sbjct: 373 GASKILKMMMTRGVD--PTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHL 430
Query: 437 ILKLYVNWDCEDK----VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
ILK+ CED +EM+ +G+ PD + T++IH L LE+A F
Sbjct: 431 ILKML----CEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNA 486
Query: 493 RLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTS 529
+G++P+ T ++ D ++ K + K++ L S
Sbjct: 487 VRRGIIPQYITFKMI-DNGLRSKGMSDMAKRLSSLMS 522
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 149/301 (49%), Gaps = 6/301 (1%)
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILN 265
I +F + + G DL L+ C H+ A + + K + + T+N ++
Sbjct: 82 VISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIK 141
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G + +A F ++ + + V+Y T +N L K G+ RL + + KP
Sbjct: 142 GLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKP 201
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DVV N II +LC K + +A ++ EM +G PNV TYN+L+ C + ++ + L
Sbjct: 202 DVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLL 261
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+EM+ KN + P+ TFN L+ +L K + VL M + K TYN ++ Y
Sbjct: 262 NEMKLKNIN--PDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYF 319
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ ++ + M + G+ P+ R+YT MI GL + +++A+S F EM+ K M+P+
Sbjct: 320 FLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIV 379
Query: 503 T 503
T
Sbjct: 380 T 380
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 164/356 (46%), Gaps = 25/356 (7%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P FN ++D LG+ + V M PD+V TY L++ Y + V+
Sbjct: 270 NPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVV---TYNSLIDGYFFLNKVKN 326
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIILN 265
A VF + G ++ + ++ LC+ K V+ A + FE K DI T +++
Sbjct: 327 AKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLID 386
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C ++ A K + + +PD +Y ++AL K G+L A FQ + KG
Sbjct: 387 GLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHL 446
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+V T N +I+ LC EA+++ +M+ +GC+P+ T+ ++I L + + + L
Sbjct: 447 NVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKIL 506
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP--EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM + L+ +K +E VL M + K TY ++ Y
Sbjct: 507 REMIARG-------------LQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFL 553
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ ++ + M + G+ P+ + YT+MI GL K +++A+S F EM+ K M P
Sbjct: 554 VNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFP 609
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 138/286 (48%), Gaps = 6/286 (2%)
Query: 222 DLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D+ + ++ LC+ K + + + + E ++ T N ++ G+C++G++ EA
Sbjct: 202 DVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLL 261
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
++ PD T+ T ++AL K+GK+ A + M + KPDVVT N +ID F
Sbjct: 262 NEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFL 321
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
++ A V M G PNV TY ++I LCK K ++ +EM+ KN +P+ +
Sbjct: 322 NKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKN--MIPDIV 379
Query: 401 TFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T+ L+ L K E + ++M+ G + +Y ++L + + ++ +
Sbjct: 380 TYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRL 439
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
KG + ++Y VMI+GL +A+ +M KG +P+ T
Sbjct: 440 LVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAIT 485
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 158/363 (43%), Gaps = 27/363 (7%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV-----NEKTYGILLNRYAAAH 202
+E P + +LD L + R + F + LV N +TY +++N A
Sbjct: 405 KEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRL--LVKGYHLNVQTYNVMINGLCKAD 462
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI 262
+ EA+ + + + G + D F+ ++ L FE ++N+ I +
Sbjct: 463 LFGEAMDLKSKMEGKGCMPDAITFKTIICAL------------FEKDENDKAEKI-LREM 509
Query: 263 ILNGWCVLGNVY--EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
I G V EAK + K+ +PD VTY T ++ +L A +F +M +
Sbjct: 510 IARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQ 569
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G P+V +ID LC KK + EA+ + EMK++ PN+ TY SLI LCK +E
Sbjct: 570 MGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLER 629
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVI 437
L EM++ P+ ++ LL L K E + +R+ G ++ Y +
Sbjct: 630 AIALLKEMKEHGIQ--PDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAM 687
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ D+ +ME KG PD ++ ++I L++K + A EM +G+
Sbjct: 688 INELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747
Query: 498 VPE 500
+ E
Sbjct: 748 MKE 750
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 197/431 (45%), Gaps = 55/431 (12%)
Query: 86 PGDEIAINVQNILKTCSVSTK-GE-IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFF 143
P EI + IL+ S + GE IEK+L L DL+ VI+R D A+ F
Sbjct: 31 PPAEIERLAEIILRQVVDSKRAGEGIEKSLGLYGDILVPDLVGKVIHRIP-DPNTAWEVF 89
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF--DEMPDLV--NEKTYGILLNRYA 199
+W ++ ++ N +L V +ARR VE +F M ++ +E +Y L+N +
Sbjct: 90 QWAGKQSKFTHNRFTCNNLLSVYVKARR-VEDAHLFFQSHMKNVFEPDEVSYNTLMNGFF 148
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKT 259
A V++A+ +F K+ G + V +++
Sbjct: 149 KAGDVKKALALFGEMKDSG--------------------IAV---------------LRS 173
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
NI+L G C G + A +KD + P+ ++Y ++ L K K+ A+ LF+ M
Sbjct: 174 HNIVLRGLCSGGKISMAWEVFKD-MSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMV 232
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
+K PDVVT +ID L ++R+ EA ++ E + +GC P V TYN++I LCK R+E
Sbjct: 233 DKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIE 292
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNV 436
D+M + P+ T++ L+ L + E+ + E M GC TYN
Sbjct: 293 NALTLYDDM-VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNT 351
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMG----PDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+L CEDK + +M G+G P+ +YTV+I RL DA+ EM
Sbjct: 352 LLDGLCKSGCEDKAMEIFRKM---GVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEM 408
Query: 493 RLKGMVPEPRT 503
+ ++P+ T
Sbjct: 409 EGRSLLPDAVT 419
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 162/342 (47%), Gaps = 15/342 (4%)
Query: 177 QVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
+VF +M P+L+ +Y I+++ + V++AI +F + + D+ + L+
Sbjct: 192 EVFKDMSGIFSPNLI---SYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALID 248
Query: 232 WLCRYKHVEVAETFFESEKNEFGYD-IKTMNIILNGWCVLGNVYEAKRFWKDIIK-SKCE 289
L + + V+ A FE + + + + T N +++G C G + A + D+++ +
Sbjct: 249 GLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLK 308
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD TY+ +N L + A L++ M + G PDVVT N ++D LC +A+E+
Sbjct: 309 PDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEI 368
Query: 350 LREMK-NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
R+M C PNV TY LI CK+ R+ + EME + S LP+ +TF +++
Sbjct: 369 FRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGR--SLLPDAVTFTTVIQK 426
Query: 409 LKKPEEVPWVLERMERNG--CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
L K + E E G CK + +N +L Y D + + M G P
Sbjct: 427 LCKESRIDEAHELFESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTL 486
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVN 508
+YT ++ G GR DAL +HEM G PE LV+
Sbjct: 487 ATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERHLAELVD 528
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 38/245 (15%)
Query: 107 GEIEKALNQCELTLTDDLI------------------VNVINRYRFDWEAAYTFFKWVSR 148
G IE AL TL DD++ +N+ NR E AY ++ +
Sbjct: 289 GRIENAL-----TLYDDMVREPHLKPDMFTYSALINGLNLSNR----GEKAYELYEEMLD 339
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-------PDLVNEKTYGILLNRYAAA 201
G SP +N +LD L ++ + +++F +M P+++ TY +L++R+
Sbjct: 340 TG-CSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVI---TYTVLIDRFCKV 395
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
+ +A+ + + L D F ++ LC+ ++ A FES D N
Sbjct: 396 DRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKPDSVLFN 455
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+L G+C + + +AK+ ++ S C P TY V + G+ AL ++ M E
Sbjct: 456 TMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEM 515
Query: 322 GRKPD 326
G P+
Sbjct: 516 GFPPE 520
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 189/376 (50%), Gaps = 21/376 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + + +L L ++R+ ++ ++F EM + + NE T+ +L+ + MVE AI V
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 304
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN--IILNGWC 268
+ E + + ++ +C+ V+ A F + +G + T++ +L G C
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNN-MGSYGCNPDTISYTTVLKGLC 363
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+AK K+++++ C P+ VT+ TF+ L +KG + A+ L + M E G VV
Sbjct: 364 RAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVV 423
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N +++ C + I ALE+ R M C PN TY +L+ LC +R++ E + EM
Sbjct: 424 TYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEM 480
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
++ C PN +TFN L+ + +E ++E+M +GC + TYN + + D
Sbjct: 481 LHRD--CPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFD-GITKD 537
Query: 446 C--EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
C ED + + KG+ PD +++ +I L + R+E+A+ FH + GM P+
Sbjct: 538 CSSEDAL-ELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPK--- 593
Query: 504 GILVNDMNIKLKERGE 519
++ N + + L +R E
Sbjct: 594 ALVYNKILLGLCKRHE 609
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 149/331 (45%), Gaps = 11/331 (3%)
Query: 166 LGRARRFVELIQVFD-EMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
L A R VEL D E PD+ L+ +A V + G D+
Sbjct: 55 LAGAARLVELSASRDGEAPDVY---LCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVF 111
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
A+ L+ CRY H++ A S D T ++ C G V +A D++
Sbjct: 112 AYNTLVAGYCRYGHLDAARRLIGSMP--VAPDAYTYTPLIRVLCDRGRVADALSLLDDML 169
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+ C+P+ VTY + A+ K A+ + M KG P++VT N II+ +C + R+
Sbjct: 170 RRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 229
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A ++L + + GC P+ +Y +L+K LC KR + V E EM +KN C+PNE+TF+
Sbjct: 230 DARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN--CMPNEVTFDM 287
Query: 405 LLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L++ + E VL++M + C +T N+++ D M G
Sbjct: 288 LIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYG 347
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
PD SYT ++ GL R DA EM
Sbjct: 348 CNPDTISYTTVLKGLCRAERWNDAKELLKEM 378
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 170/370 (45%), Gaps = 25/370 (6%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + + ++ VL R + + + D+M P++V TY +LL E+
Sbjct: 139 APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVV---TYTVLLEAMCKNSGFEQ 195
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY----DIKTMNI 262
A+ V D + G ++ + ++ +CR V+ A F Y D +
Sbjct: 196 AMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLL---NRLFSYGCQPDTVSYTT 252
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+L G C + + + ++++ C P+ VT+ + + G + A+++ Q M E
Sbjct: 253 LLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHE 312
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+ CN +I+++C + R+ +A + L M + GC P+ +Y +++K LC+ +R
Sbjct: 313 CATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAK 372
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
E L EM + N C PNE+TFN + L + E+ ++E+M+ +GC + TYN ++
Sbjct: 373 ELLKEMVRNN--CPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVN 430
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ D + M K P+ +YT ++ GL + RL+ A EM + P
Sbjct: 431 GFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPP 487
Query: 500 EPRT-GILVN 508
T +LVN
Sbjct: 488 NVVTFNVLVN 497
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 159/392 (40%), Gaps = 53/392 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +L+ + + F + + V DEM P++V TY +++N V++A
Sbjct: 175 PNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIV---TYNVIINGMCREGRVDDA 231
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKN-------------- 251
+ +R +G D ++ LL LC K + E F EKN
Sbjct: 232 RDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 291
Query: 252 --------------------EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
E + NI++N C G V +A +F ++ C PD
Sbjct: 292 FCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPD 351
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+++Y T + L + + A L + M P+ VT N I LC K I +A+ ++
Sbjct: 352 TISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIE 411
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+M+ GC V TYN+L+ C +++ E M C PN IT+ LL L
Sbjct: 412 QMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM-----PCKPNTITYTTLLTGLCN 466
Query: 412 PEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
E + E M C + T+NV++ + D+ E+M + G P+ +
Sbjct: 467 AERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLIT 526
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
Y + G+ EDAL H + KG+ P+
Sbjct: 527 YNTLFDGITKDCSSEDALELLHGLVSKGVSPD 558
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 10/280 (3%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYG 192
W A K + R + P FN + +L G + + LI+ E V TY
Sbjct: 368 WNDAKELLKEMVRN-NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYN 426
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
L+N + ++ A+ +F + + + LL LC + ++ A E E
Sbjct: 427 ALVNGFCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHR 483
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ ++ T N+++N +C G + EA + +++ C P+ +TY T + +TK A
Sbjct: 484 DCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDA 543
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L L + KG PDV+T + II L + R+ EA+++ ++ G P YN ++
Sbjct: 544 LELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLG 603
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
LCK ++ ++L M NG C+PNE T+ L++ L +
Sbjct: 604 LCKRHEIDNAIDFLAYM-VSNG-CMPNESTYIILIEGLAR 641
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
VL E +G + YN ++ Y + D R M + PD +YT +I L
Sbjct: 97 VLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLC 153
Query: 478 DKGRLEDALSYFHEMRLKGMVP 499
D+GR+ DALS +M +G P
Sbjct: 154 DRGRVADALSLLDDMLRRGCQP 175
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 15/207 (7%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM- 182
L+ + N R D AA + + R D P FN +++ + E I++ ++M
Sbjct: 460 LLTGLCNAERLD-AAAELVAEMLHR--DCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMM 516
Query: 183 -----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
P+L+ TY L + E+A+ + G D+ F +++ L +
Sbjct: 517 EHGCTPNLI---TYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKED 573
Query: 238 HVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
VE A F + + G K + N IL G C + A F ++ + C P+ TY
Sbjct: 574 RVEEAIQMFHLAQ-DIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTY 632
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKG 322
+ L ++G L A L + +G
Sbjct: 633 IILIEGLAREGLLKEAQDLLSMLCSRG 659
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 133/288 (46%), Gaps = 8/288 (2%)
Query: 222 DLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D+ ++ + LC+ + E E F E E+ D T NI++NG C +
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
++ P VTY T ++ G++ A+ + M +G P+ VT +I LC
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209
Query: 341 KRIPEALEVLREMKNRG--CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
+ A+ VL+EMK RG C PNV TY LI LC+ E E+LDEM C PN
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISG--CFPN 267
Query: 399 EITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
T+ L+ L + E +L M GC++ YN ++ D R
Sbjct: 268 NATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQI 327
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
M +KG+ PD +YT +I GL D G L++AL EMR KG+VP T
Sbjct: 328 LMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVT 375
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 141/348 (40%), Gaps = 47/348 (13%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F+ + +G +P S +N +++ L + + + + DEM P +V TY
Sbjct: 110 AMEIFREMEEKGS-APDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVV---TYT 165
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-- 250
L++ + A V+ A+ + D + G + + L+ LC VE A + K
Sbjct: 166 TLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLR 225
Query: 251 -NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
NE ++ T +++G C G F ++I S C P++ TY ++ L +KG
Sbjct: 226 GNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFL 285
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A L M G + DVV N +ID LC + A E+ M +G P+V TY SLI
Sbjct: 286 EAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLI 345
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKM 429
+ LC ++ + EM K +PN +T+ L+ NG
Sbjct: 346 QGLCDAGLLDEALGLMQEMRAKG--IVPNSVTYTTLI------------------NG--- 382
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ D D EM+ G+ P Y ++ LY
Sbjct: 383 -----------FTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSLY 419
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
++LR+++ + DV++ + I+ LC K +I EA+E+ REM+ +G P+ TYN LI
Sbjct: 74 SSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILI 133
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNG 426
LCK ++E +DEM+ + S P +T+ L+ V +L+ ME G
Sbjct: 134 NGLCKDAQLEMGVSLMDEMQARGFS--PTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRG 191
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG--MGPDQRSYTVMIHGLYDKGRLED 484
+T TY +++ + ++ +EM+ +G P+ +YT +IHGL KG E
Sbjct: 192 ITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEM 251
Query: 485 ALSYFHEMRLKGMVPEPRT 503
+ + EM + G P T
Sbjct: 252 GMEFLDEMIISGCFPNNAT 270
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
++ IP +L + R +V +Y+ I LCK ++ E EME+K + P+
Sbjct: 69 RRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSA--PDS 126
Query: 400 ITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
T+N L+ L K ++ +++ M+ G + TY ++ + D +E
Sbjct: 127 FTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDE 186
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
ME +G+ P+ +YT +I GL D G +E A+ EM+L+G
Sbjct: 187 MEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRG 226
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 172/359 (47%), Gaps = 25/359 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +N+++ L +A R E + +EM PD+ TY L+ + + ++A
Sbjct: 113 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIF---TYTTLITGFCKSKKSDDA 169
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILN 265
+ VF++ G D+ + L+ LC+ ++ A F + + T N +++
Sbjct: 170 LRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLIS 229
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C +G + EA + + ++ PD VTY T +N K +L A L M KG P
Sbjct: 230 GFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 289
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY- 384
DVVT ++D LC + R+ +A+ +L EM+ + C P V TYN+++ C+ ++E ++
Sbjct: 290 DVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLY 441
L+EM+ C PN ++FN +++ L K E ++E R C Y ++
Sbjct: 350 LEEMD-----CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Query: 442 VNWDCEDKVRHTWEEM-EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ + +M E+ G P+ +Y+ +I GL + G L+ A Y KG VP
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIE----KGCVP 459
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 164/371 (44%), Gaps = 80/371 (21%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLG------RARRFVELIQVFDEMPDLVNEK 189
E A F + +G + P + A++ L AR+F+E + + P++V
Sbjct: 27 LEQALIFLGKMVSKG-FHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVV--- 82
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY +L++ V+EA+ + + R K V A T+
Sbjct: 83 TYTVLIDGLCKGGRVDEAVALLSKM--------------------RKKCVPTAVTY---- 118
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
N +++G C EA ++++ S C PD TY T + K K
Sbjct: 119 -----------NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL-REMKNRGCLPNVTTYNSL 368
ALR+F+ + +G +PDVVT +C+ID LC + R+ EA+++ R +K+ C+PN TYNSL
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
I C++ +M+ L+ M + S P+ +T+ L+ K L R++
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSS--PDVVTYTTLMNGFCK-------LARLD----- 273
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
D Y+++ +M +KG+ PD ++T ++ GL + RL DA+
Sbjct: 274 ---DAYDLL-----------------NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313
Query: 489 FHEMRLKGMVP 499
EMR K P
Sbjct: 314 LGEMRRKSCSP 324
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 108/217 (49%), Gaps = 6/217 (2%)
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ + C D VTY + + L K +L AL M KG PDV T +I ALC + R
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ EA + L EM NR PNV TY LI LCK R++ L +M +K C+P +T+
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK---CVPTAVTY 118
Query: 403 NYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
N L+ L K E E +LE M +GC TY ++ + D +E++
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+G PD +Y+ +I GL +GRL++A+ F M G
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 42/289 (14%)
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
N D T ++ G C + + +A F ++ PD TY ++AL + +L
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A + + M + P+VVT +ID LC R+ EA+ +L +M+ + C+P TYNSLI
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLIS 123
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLE------- 420
LCK +R Y+ L+EM C+P+ T+ L+ KK ++ V E
Sbjct: 124 GLCKAERASEAYDLLEEMVYS--GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 181
Query: 421 ----------------------------RMERNG-CKMSTDTYNVILKLYVNWDCEDKVR 451
RM ++G C +T TYN ++ + D+
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ E M + G PD +YT +++G RL+DA ++M KG+ P+
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 44/293 (15%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F + + G P + +N+++ R + E + + + M PD+V TY
Sbjct: 204 AIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV---TYT 260
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKN 251
L+N + +++A + ++ G D+ F +L+ LCR + + E +
Sbjct: 261 TLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N IL+G+C + EA++F + + C P+ V++ + L K + A
Sbjct: 321 SCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEA 378
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN---------------- 355
+ L + + PDVV +ID LC +K++ EA V R+M
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLIT 438
Query: 356 ----------------RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+GC+PN+ TYN LI K R E E LD+M Q+
Sbjct: 439 GLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 174/365 (47%), Gaps = 15/365 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + E + + D M P+LV TYG+++N
Sbjct: 107 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV---TYGVVVNGLCKRG 163
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
++ A + ++ + D+ F ++ LC+Y+HV+ A F E E ++ T +
Sbjct: 164 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 223
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ C G +A + D+I+ K P+ VT+ ++A K+GK A +L M ++
Sbjct: 224 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 283
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
PD+ T N +I+ C R+ +A ++ M ++ C P++ TYN+LIK CK KR+E
Sbjct: 284 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 343
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
E EM + + + +T+ L++ L + V ++M +G TY+++L
Sbjct: 344 TELFREMSHR--GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 401
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
N +K ++ M+K + D YT MI G+ G+++D F + LKG+
Sbjct: 402 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 461
Query: 499 PEPRT 503
P T
Sbjct: 462 PNVVT 466
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 154/343 (44%), Gaps = 47/343 (13%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF-FESEKNEFGYD--IKTM 260
+++AIG+F + L + F LL + + K ++ + + + GY+ I T+
Sbjct: 23 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF---------------------- 298
+ +LNG+C + +A +++ PD++T+ T
Sbjct: 83 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142
Query: 299 -------------VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
VN L K+G + A L M + DVV N IID+LC + + +
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 202
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
AL + +EM+ +G PNV TY+SLI LC R + L +M +K + PN +TFN L
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN--PNLVTFNAL 260
Query: 406 LKSLKKPEEVPWV-LERMERNGCKMSTD----TYNVILKLYVNWDCEDKVRHTWEEMEKK 460
+ + K E +V E++ + K S D TYN ++ + D DK + +E M K
Sbjct: 261 IDAFVK--EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
PD +Y +I G R+ED F EM +G+V + T
Sbjct: 319 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 361
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 142/337 (42%), Gaps = 43/337 (12%)
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
++ + + + G + +LL C K + A + + E GY D T ++
Sbjct: 63 SLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD-QMVEMGYRPDTITFTTLI 121
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G + EA +++ C+P+ VTY VN L K+G + A L M +
Sbjct: 122 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 181
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
DVV N IID+LC + + +AL + +EM+ +G PNV TY+SLI LC R +
Sbjct: 182 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 241
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKP-------------------------------- 412
L +M +K + PN +TFN L+ + K
Sbjct: 242 LSDMIEKKIN--PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 299
Query: 413 ------EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
++ + E M C DTYN ++K + + + EM +G+ D
Sbjct: 300 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 359
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+YT +I GL+ G ++A F +M G+ P+ T
Sbjct: 360 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 396
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 12/263 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P FNA++D + +FVE ++ D+M PD+ TY L+N + +++
Sbjct: 251 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF---TYNSLINGFCMHDRLDK 307
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F+ DL + L+ C+ K VE E F E D T ++
Sbjct: 308 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 367
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G+ A++ +K ++ PD +TY+ ++ L GKL AL +F M + K
Sbjct: 368 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 427
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ +I+ +C ++ + ++ + +G PNV TYN++I LC + ++ Y L
Sbjct: 428 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 487
Query: 386 DEMEQKNGSCLPNEITFNYLLKS 408
+M++ LP+ T+N L+++
Sbjct: 488 KKMKEDGP--LPDSGTYNTLIRA 508
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 82/204 (40%), Gaps = 46/204 (22%)
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE--YLDEMEQ--------- 390
++ +A+ + M LP++ +N L+ + K+K+ + V L +M +
Sbjct: 22 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81
Query: 391 ----KNGSC--------------------LPNEITFNYLLKSL---KKPEEVPWVLERME 423
NG C P+ ITF L+ L K E +++RM
Sbjct: 82 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141
Query: 424 RNGCKMSTDTYNVILKLYVNWDCE----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+ GC+ + TY V+ VN C+ D + +ME + D + +I L
Sbjct: 142 QRGCQPNLVTYGVV----VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 197
Query: 480 GRLEDALSYFHEMRLKGMVPEPRT 503
++DAL+ F EM KG+ P T
Sbjct: 198 RHVDDALNLFKEMETKGIRPNVVT 221
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+VF +M PD++ TY ILL+ +E+A+ VFD ++ D+ + ++
Sbjct: 380 KVFKQMVSDGVPPDIM---TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 436
Query: 231 LWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
+C+ V+ F S ++ T N +++G C + EA K + +
Sbjct: 437 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 496
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAM 318
PDS TY T + A + G + L + M
Sbjct: 497 PDSGTYNTLIRAHLRDGDKAASAELIREM 525
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 190/410 (46%), Gaps = 59/410 (14%)
Query: 152 YSPGSNVFNAILDVLG-----RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
Y+P +NA+L L ARRF+ + P N TY IL+ A +EE
Sbjct: 114 YAPSVPAYNAVLLALSDASLPSARRFLSSMLRHGVAP---NVYTYNILVRALCARGRLEE 170
Query: 207 AIGVF-DRRKE------------------FGELD-----------------DLSAFQNLL 230
A+GV D R GELD +L F +++
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230
Query: 231 LWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
LC+ +E A F+ E D+ + N +L+G+C +G ++E+ + ++ +
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD VT+ + ++A K G L A+ L M E+G + + VT +ID C K + +AL
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+ EM+ G P+V YN+LI CK+ RM+ E + EME K P+ +T++ ++
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK--PDVVTYSTIISGY 408
Query: 410 KKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDK----VRHTWEEMEKKGM 462
K + ++M + G TY+ +++ CE+K +E M + G+
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR----GLCEEKRLNDACELFENMLQLGV 464
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMN 511
PD+ +YT +I G +G +E ALS EM KG++P+ T +L+N ++
Sbjct: 465 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 185/431 (42%), Gaps = 65/431 (15%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
+ + A + EG+ P FN++++ L +A R +VFDEM PD+V
Sbjct: 202 ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVV-- 259
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA------ 242
+Y LL+ Y + E++ VF + G + D+ F +L+ C+ ++E A
Sbjct: 260 -SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 243 ---------ETFFESEKNEF---GY------------------DIKTMNIILNGWCVLGN 272
E F + + F G+ + N ++NG+C LG
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+ A+ +++ + +PD VTY+T ++ K G L +A +L Q M +KG PD +T +
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+I LC +KR+ +A E+ M G P+ TY +LI CK +E DEM +K
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498
Query: 393 GSCLPNEITFNYLLKSLKKP----------------EEVPWVLERMERNGCKMSTDTYNV 436
LP+ +T++ L+ L K + VP ++ C + +V
Sbjct: 499 --VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSV 556
Query: 437 I--LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+ LK + + ++ M + D Y+++IHG G + ALS+ +M
Sbjct: 557 VALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR 616
Query: 495 KGMVPEPRTGI 505
G P + I
Sbjct: 617 SGFSPNSTSTI 627
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D +I+++G C GNV +A F K +++S P+S + + V L ++G + A
Sbjct: 587 DGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 646
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
Q + D +ID + + ++VL M G LP+
Sbjct: 647 QDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 174/376 (46%), Gaps = 16/376 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D + AY+ + + G P +N+I+ L +A+ + ++V + M PD +
Sbjct: 211 DSDKAYSTYHEMLDRG-ILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM-- 267
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY +L+ Y ++ +EAIG + + G D+ + L+ +LC+ A F+S
Sbjct: 268 -TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
K +I T +L G+ G + E ++++ PD ++ + A K+GK
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A+ +F M ++G P+ VT +I LC R+ +A+ +M + G P YNS
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMER 424
LI LC + E E + EM + G CL N I FN ++ S K V + E M R
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDR-GICL-NTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G K + TYN ++ Y D+ M G+ P+ +Y+ +I+G R+ED
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 485 ALSYFHEMRLKGMVPE 500
AL F EM G+ P+
Sbjct: 565 ALVLFKEMESSGVSPD 580
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 151/358 (42%), Gaps = 44/358 (12%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PDL TYGIL+ A ++ + G D AF LL LC K A
Sbjct: 85 PDLC---TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 243 ETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRF---WKDIIKSKCEPDSVTYAT 297
E G ++ + NI+L G C EA D PD V+Y T
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+N K+G A + M ++G PDVVT N II ALC + + +A+EVL M G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 358 CLPNVTTYNSLIKHLCK----------IKRMET--------VYEYLDEMEQKNGSCLPNE 399
+P+ TYNS++ C +K+M + Y L + KNG C+
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 400 ITFNYLLKSLKKPE------------------EVPWVLERMERNGCKMSTDTYNVILKLY 441
F+ + K KPE E+ +L+ M RNG +++++ Y
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ + +M ++G+ P+ +Y +I L GR+EDA+ YF +M +G+ P
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 109/249 (43%), Gaps = 5/249 (2%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE- 348
PD TY + + G+L + +KG + D + ++ LC KR +A++
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM-EQKNGSCLPNEITFNYLLK 407
VLR M GC+PNV +YN L+K LC R + E L M + + G P+ +++ ++
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 408 SLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
K ++ M G TYN I+ DK M K G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKV 524
D +Y ++HG G+ ++A+ + +MR G+ P+ T L+ D K E K
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 525 IKLTSLGLK 533
+T GLK
Sbjct: 325 DSMTKRGLK 333
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 170/391 (43%), Gaps = 31/391 (7%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--------LVNE 188
+A F K R+ +P + + A++ +L ++ R + + F++M D + N
Sbjct: 389 QAMLVFSKM--RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 189 KTYGIL-LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
+G+ N++ A E + + DR G + F +++ C+ V +E FE
Sbjct: 447 LIHGLCTCNKWERAE--ELILEMLDR----GICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 248 -SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ ++ T N ++NG+C+ G + EA + ++ +P++VTY+T +N K
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
++ AL LF+ M G PD++T N I+ L +R A E+ + G ++TYN
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN----EITFNYLLKSLKKP---EEVPWVL 419
++ LCK K + D ++ CL + TFN ++ +L K +E +
Sbjct: 621 IILHGLCKNKLTD------DALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
NG + TY ++ + + +++ + ME G D ++ L +
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 734
Query: 480 GRLEDALSYFHEMRLKGMVPEPRTGILVNDM 510
G + A +Y + K E T L D+
Sbjct: 735 GEITRAGTYLSMIDEKHFSLEASTASLFIDL 765
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 182/429 (42%), Gaps = 82/429 (19%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + FN ++ L RA + I + ++MP + +EKT+ ++ Y ++ A+ +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 211 FDRRKEFG-----------------------------ELD-------DLSAFQNLLLWLC 234
++ EFG E+ D F L+ LC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 235 RYKHVEVAETFFESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
+ HV+ A + E GYD + T N +++G C LG V EA +I C P++
Sbjct: 307 KAGHVKHAIEIMDVMLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Query: 293 VTYATFVN----------------ALTKKGKLG-------------------TALRLFQA 317
VTY T ++ LT KG L A+ LF+
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M KG +PD T N +ID+LC K ++ EAL +L++M+ GC +V TYN+LI CK +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTY 434
E DEME S N +T+N L+ L ++ E+ ++++M G K TY
Sbjct: 486 TREAEEIFDEMEVHGVS--RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N +L + K + M G PD +Y +I GL GR+E A +++
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 495 KGMVPEPRT 503
KG+ P
Sbjct: 604 KGINLTPHA 612
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 195/442 (44%), Gaps = 54/442 (12%)
Query: 100 TCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVF 159
+ ++S AL+ ++ L D L R + D AA F S++ ++SP ++
Sbjct: 33 SSTISFASPHSAALSSTDVKLLDSL------RSQPDDSAALRLFNLASKKPNFSPEPALY 86
Query: 160 NAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFD-RRK 215
IL LGR+ F ++ ++ ++M + T+ IL+ YA + +E + V D
Sbjct: 87 EEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMID 146
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
EFG D + +L L +++ E ++ + +G D+ T N+++ C +
Sbjct: 147 EFGLKPDTHFYNRMLNLLVDGNSLKLVE-ISHAKMSVWGIKPDVSTFNVLIKALCRAHQL 205
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
A +D+ PD T+ T + ++G L ALR+ + M E G V+ N I
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265
Query: 334 IDALCFKKRIPEALEVLREMKNR------------------------------------G 357
+ C + R+ +AL ++EM N+ G
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EE 414
P+V TYNS+I LCK+ ++ E LD+M ++ C PN +T+N L+ +L K EE
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD--CSPNTVTYNTLISTLCKENQVEE 383
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+ + G T+N +++ +EEM KG PD+ +Y ++I
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 475 GLYDKGRLEDALSYFHEMRLKG 496
L KG+L++AL+ +M L G
Sbjct: 444 SLCSKGKLDEALNMLKQMELSG 465
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 164/397 (41%), Gaps = 82/397 (20%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
+EG Y P +N+++ L + E ++V D+M P+ V TY L++
Sbjct: 323 QEG-YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV---TYNTLISTLCKE 378
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKNEFGY 255
+ VEEA + G L D+ F +L+ LC ++ VA FE E +EF Y
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 256 D------------------------------IKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
+ + T N +++G+C EA+ + ++
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+SVTY T ++ L K ++ A +L M +G+KPD T N ++ C I +
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A ++++ M + GC P++ TY +LI LCK R+E + L ++ K
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK-------------- 604
Query: 406 LKSLKKPEEVPWVLERMERNGCKMSTDTYN-VILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
G ++ YN VI L+ + + E +E+ P
Sbjct: 605 --------------------GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Query: 465 DQRSYTVMIHGLYD-KGRLEDALSYFHEMRLKGMVPE 500
D SY ++ GL + G + +A+ + E+ KG VPE
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 160/359 (44%), Gaps = 43/359 (11%)
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
L+ + +L+N + VEEA+ E G D F +L+ CR +V A
Sbjct: 225 LLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALD 284
Query: 245 F--FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
F EK F D+ T N +++G C LG +A + +I +C P++VTY T ++AL
Sbjct: 285 IVDFMIEKG-FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISAL 343
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP-- 360
K+ ++ A L + + KG PDV T N +I LC K A+E+ EMKN+GC P
Sbjct: 344 CKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDE 403
Query: 361 ---------------------------------NVTTYNSLIKHLCKIKRMETVYEYLDE 387
N YN+LI LCK +R+E E D+
Sbjct: 404 FTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQ 463
Query: 388 MEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
ME S + +T+N L+ L K+ EE ++++M G K TYN +L +
Sbjct: 464 MELLGVS--RSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRV 521
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+K + M G PD +Y +I GL GR++ A +++KG+V P
Sbjct: 522 GDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHA 580
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 168/369 (45%), Gaps = 21/369 (5%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNE------KTYGILL 195
K + E + P +N +N L+ L + ++L+++ +VNE T+ +L+
Sbjct: 109 LLKILENELGFKPDTNFYNIALNALVEDNK-LKLVEMLHS--KMVNEGIVLDVSTFNVLI 165
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
AH + AI + + G D F L+ + A + +K GY
Sbjct: 166 KALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGA---LKMKKQMLGY 222
Query: 256 DIKTMNI----ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
N+ ++NG+C G V EA RF ++ + PD VT+ + VN + G + A
Sbjct: 223 GCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDA 282
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L + M EKG PDV T N +I +C +A+E+L++M R C PN TYN+LI
Sbjct: 283 LDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISA 342
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--KKPEEVPW-VLERMERNGCK 428
LCK +E + + K LP+ TFN L++ L K +++ + E M+ GCK
Sbjct: 343 LCKENEIEAATDLARILVSK--GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCK 400
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TY++++ + +EME G + Y +I GL R+EDA
Sbjct: 401 PDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEI 460
Query: 489 FHEMRLKGM 497
F +M L G+
Sbjct: 461 FDQMELLGV 469
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 166/366 (45%), Gaps = 8/366 (2%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD-EMPDLVNEKTYGIL 194
+++ T K + G P + F ++ L+++ + E+ + Y I
Sbjct: 71 FDSITTLLKQLKSSGSI-PNATTFATLIQSFTNFHEIENLLKILENELGFKPDTNFYNIA 129
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-F 253
LN + ++ + + G + D+S F L+ LC+ + A E N
Sbjct: 130 LNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGL 189
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
D T ++ G+ G++ A + K ++ C +V+ VN K+G++ ALR
Sbjct: 190 KPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALR 249
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+ E+G PD VT N +++ C + +AL+++ M +G P+V TYNSLI +C
Sbjct: 250 FVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMC 309
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER---MERNGCKMS 430
K+ E E L +M + C PN +T+N L+ +L K E+ + + G
Sbjct: 310 KLGEFEKAIEILQQMILR--ECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPD 367
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
T+N +++ +D +EEM+ KG PD+ +Y+++I L + RL++AL
Sbjct: 368 VCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLK 427
Query: 491 EMRLKG 496
EM G
Sbjct: 428 EMESSG 433
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 168/412 (40%), Gaps = 93/412 (22%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E + P +N+++ + + F + I++ +M P+ V TY L++ +
Sbjct: 291 EKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTV---TYNTLISALCKEN 347
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN------EFGYD 256
+E A + G L D+ F L+ LC K+ ++A FE KN EF Y
Sbjct: 348 EIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTY- 406
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+I+++ C + EA K++ S C ++V Y T ++ L K ++ A +F
Sbjct: 407 ----SILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFD 462
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALE---------------------------- 348
M G VT N +ID LC KR+ EA +
Sbjct: 463 QMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVG 522
Query: 349 -------VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+++ M + GC P++ TY +LI LC+ R++ + L ++ K
Sbjct: 523 DIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMK---------- 572
Query: 402 FNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYN-VILKLYVNWDCEDKVRHTWEEMEKK 460
G ++ YN VI L++ ++ +R + EM +K
Sbjct: 573 ------------------------GIVLTPHAYNPVIQALFMRKRTKEGMR-LFREMMEK 607
Query: 461 GMGPDQRSYTVMIHGLYD-KGRLEDALSYFHEMRLKGMVPE-PRTGILVNDM 510
PD ++ ++ GL + G +++A+ + EM KG++PE P G L +
Sbjct: 608 SDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGL 659
>gi|326524037|dbj|BAJ97029.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 599
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 190/451 (42%), Gaps = 26/451 (5%)
Query: 71 HSLANSDEKSE--FQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNV 128
HSLA+S E + +R+ D Q + S S L+ L D V
Sbjct: 23 HSLASSAELAHRLLRRHGADP-----QRLASALSAS-------GLDPASPRLLD----AV 66
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-LVN 187
+ R A +F W S +P + + RA + +P L++
Sbjct: 67 LRRCGAASSLALGYFHWCSPSLPSAPLPSSLALLAKCFSRAS-AAPCPSLLAPLPSHLLS 125
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
+L R ++ A+ + R D S F +LL L + HV AE E
Sbjct: 126 ASILSPVLRRLPPPRVLPFALSLLSSRPAH---DHPSLFLSLLESLSKTGHVAAAERLVE 182
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ ++ +L GWC L + EAK + + PD V + T + G+
Sbjct: 183 ELQPRLPLSLRHYTALLYGWCRLAKLDEAKHVLARMKAAGVAPDVVVFNTLLAGFVADGR 242
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
A L + M + P+ V+ ++ L K R+ E + V EM+ +GC P+ TY +
Sbjct: 243 FEDAFELAREMERRDCPPNAVSYTTLMQGLGSKGRVDEVMRVFVEMRRKGCTPDSVTYGT 302
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP--EEVPWVLERMERN 425
L+ CK R+ YE+LD M ++G + + + + K+ EE ++ERM
Sbjct: 303 LVTAFCKAGRLSQGYEFLDSM-SRDGLRVDPGVYLGFFVAHEKEQQLEECLELMERMREC 361
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
C + YNV+++L + W E E G+ P ++ +M++GL +G L DA
Sbjct: 362 RCPPDLNIYNVVIRLSCKLGETKQAIALWNETENSGLSPGVDTFAIMVNGLVGQGSLVDA 421
Query: 486 LSYFHEMRLKGMVPEPRTGILVNDMNIKLKE 516
+YF +M +G+ P+ G+L + +N +++
Sbjct: 422 CNYFKDMVGRGLFVAPQYGVLKDLLNALVRD 452
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 136/371 (36%), Gaps = 72/371 (19%)
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
A R VE +Q +P ++ + Y LL + ++EA V R K G D+ F
Sbjct: 177 AERLVEELQ--PRLP--LSLRHYTALLYGWCRLAKLDEAKHVLARMKAAGVAPDVVVFNT 232
Query: 229 LLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
LL E A E E E+ + + + ++ G G V E R + ++ +
Sbjct: 233 LLAGFVADGRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSKGRVDEVMRVFVEMRRKG 292
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK----------------------- 324
C PDSVTY T V A K G+L +M G +
Sbjct: 293 CTPDSVTYGTLVTAFCKAGRLSQGYEFLDSMSRDGLRVDPGVYLGFFVAHEKEQQLEECL 352
Query: 325 ------------PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
PD+ N +I C +A+ + E +N G P V T+ ++ L
Sbjct: 353 ELMERMRECRCPPDLNIYNVVIRLSCKLGETKQAIALWNETENSGLSPGVDTFAIMVNGL 412
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD 432
+ Y +M + P LL +L + E++ +++ D
Sbjct: 413 VGQGSLVDACNYFKDMVGRGLFVAPQYGVLKDLLNALVRDEKL------------ELAKD 460
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ I + CE V ++T+ IH LY K +++A SY +M
Sbjct: 461 VWGCI----ASRGCELNV----------------SAWTIWIHALYAKKHVKEACSYCLDM 500
Query: 493 RLKGMVPEPRT 503
G++P+P T
Sbjct: 501 LEAGLMPQPDT 511
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 183/394 (46%), Gaps = 14/394 (3%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGD---YSPGSNVFNAILDVL---GRARRF 172
+T +++N + ++R EA F K E + P +N ++D L GR
Sbjct: 340 VVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEG 399
Query: 173 VELIQVFDEMPD-LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
+ L++ P + N TY L++ Y A M+E A +FD+ + G ++ L+
Sbjct: 400 LGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVD 459
Query: 232 WLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
+C++ + A FF E + + T ++ +C + N+ +A + +++++ C P
Sbjct: 460 GMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSP 519
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D++ Y T ++ L++ GKL A + M E G PD+V+ N +I+ C K ++ EA E+L
Sbjct: 520 DAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEML 579
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL- 409
+EM+N G P+ TYN+LI H K T + + +M ++ +P +T+ L+ +
Sbjct: 580 KEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKE--GLVPTVVTYGALIHAYC 637
Query: 410 --KKPEEVPWVLERMERNG-CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
+E + M +T YN+++ + D ++M+ KG+ P+
Sbjct: 638 LNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNT 697
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++ M GL +K L A M P+
Sbjct: 698 NTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPD 731
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 172/368 (46%), Gaps = 21/368 (5%)
Query: 160 NAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKE 216
NA+L LGRAR F + + EM ++ N T+GIL+N V+EA+ VF++
Sbjct: 309 NALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNG 368
Query: 217 FGELD------DLSAFQNLLLWLCRYKHVEVAETFFESEKNE--FGYDIKTMNIILNGWC 268
GE + D+ + L+ LC+ E E +++ + T N +++G+C
Sbjct: 369 -GESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYC 427
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+ A+ + + K P+ VT T V+ + K G++ A+ F M KG K + V
Sbjct: 428 KASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAV 487
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +I A C I +A+E+ EM GC P+ Y +LI L + +++ L +M
Sbjct: 488 TYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKM 547
Query: 389 EQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
++ S P+ ++FN L+ K +E +L+ ME G K TYN ++ +
Sbjct: 548 KEAGFS--PDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTG 605
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-- 503
++M K+G+ P +Y +IH G L++A+ F +M VP P T
Sbjct: 606 DFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVP-PNTVI 664
Query: 504 -GILVNDM 510
IL+N +
Sbjct: 665 YNILINSL 672
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 177/373 (47%), Gaps = 22/373 (5%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-----------PDLVNEKTYGILLN 196
+E D P F +++ L + RR E ++VF++M PD++ TY L++
Sbjct: 332 KEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVI---TYNTLID 388
Query: 197 RYAAAHMVEEAIGVFDR-RKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFG 254
EE +G+ +R R + + + + L+ C+ +E A E F + K+
Sbjct: 389 GLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVP 448
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T+N +++G C G + A F+ ++ + ++VTY + A + A+ L
Sbjct: 449 PNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMEL 508
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M E G PD + +I L ++ A VL +MK G P++ ++N LI C+
Sbjct: 509 FDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCR 568
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMST 431
+++ YE L EME N P+ +T+N L+ K + ++++M + G +
Sbjct: 569 KNKLDEAYEMLKEME--NAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTV 626
Query: 432 DTYNVILKLY-VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TY ++ Y +N + ++ ++ + + P+ Y ++I+ L K +++ ALS
Sbjct: 627 VTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMD 686
Query: 491 EMRLKGMVPEPRT 503
+M++KG+ P T
Sbjct: 687 DMKVKGVKPNTNT 699
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 163/370 (44%), Gaps = 31/370 (8%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEM-------PDLVNEK--TYGILLNRYAAAHMV-- 204
+++ N ++DVL R R + + + DEM P N + L R V
Sbjct: 192 THIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDE 251
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG-YDIKTMNII 263
EE +G+ + E + L+ LCR + A G + + N +
Sbjct: 252 EEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNAL 311
Query: 264 LNGWCVLGNVYEAKR---FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
L LG E KR ++ + +P+ VT+ +N L K ++ AL +F+ M
Sbjct: 312 LTA---LGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM-N 367
Query: 321 KGR------KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG-CLPNVTTYNSLIKHLC 373
G +PDV+T N +ID LC R E L ++ M+++ C+PN TYN LI C
Sbjct: 368 GGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYC 427
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMS 430
K +E E D+M K+G PN +T N L+ + K + +E M+ G K +
Sbjct: 428 KASMIEAARELFDQM-NKDG-VPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGN 485
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TY +++ + N + +K ++EM + G PD Y +I GL G+L+ A
Sbjct: 486 AVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLS 545
Query: 491 EMRLKGMVPE 500
+M+ G P+
Sbjct: 546 KMKEAGFSPD 555
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 45/310 (14%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGI 193
EAA F ++++G P N ++D + + R ++ F+EM N TY
Sbjct: 433 EAARELFDQMNKDG-VPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L+ + + +E+A+ +FD E G D + L+ L + ++ A +F S+ E
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRA-SFVLSKMKEA 550
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G+ DI + N+++NG+C + EA K++ + +PD VTY T ++ +K G TA
Sbjct: 551 GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA 610
Query: 312 LRLFQAMWEKGRKPDVVT--------C----------------------------NCIID 335
RL + M ++G P VVT C N +I+
Sbjct: 611 HRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
+LC K ++ AL ++ +MK +G PN T+N++ K L + + +E +D M + +C
Sbjct: 671 SLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEH--AC 728
Query: 396 LPNEITFNYL 405
P+ IT L
Sbjct: 729 NPDYITMEIL 738
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 11/235 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E SP + V+ ++ L +A + V +M PD+V ++ +L+N + +
Sbjct: 514 EAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIV---SFNVLINGFCRKN 570
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMN 261
++EA + + G D + L+ + A + E + T
Sbjct: 571 KLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYG 630
Query: 262 IILNGWCVLGNVYEAKRFWKDIIK-SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+++ +C+ GN+ EA + ++D+ SK P++V Y +N+L +K ++ AL L M
Sbjct: 631 ALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKV 690
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
KG KP+ T N + L K + +A E++ M C P+ T L + L +
Sbjct: 691 KGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAV 745
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 229/537 (42%), Gaps = 78/537 (14%)
Query: 63 RIETAQLVHSLANSDEKSEFQRYPGDEIAINVQ-NILKTCS-----VSTKGEIEKALNQC 116
R+E +V SL K E +R P + + + +CS +ST G+I K
Sbjct: 88 RMERPDVVISL---HRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHP 144
Query: 117 ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI 176
L L+ + R A FF + + P F +++ L R R VE +
Sbjct: 145 SLVTFSTLLHGLCVEDRV--SEALHFFHQICK-----PNVIAFTTLMNGLCREGRVVEAV 197
Query: 177 QVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL-DDLSAFQNLL-- 230
+ D M + N+ TYG +++ A+ + + +E + ++ + ++
Sbjct: 198 ALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDG 257
Query: 231 LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
LW + + F E ++ ++ T N ++NG+C G EA+R +++ + K P
Sbjct: 258 LWK-DGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSP 316
Query: 291 DSVTYATFVNALTKKGK-----------------------------------LGTALRLF 315
D VT++ +NAL K+GK L A R+F
Sbjct: 317 DVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMF 376
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M KG PDV+T + +ID C KR+ + +++L EM RG + N TY +LI C++
Sbjct: 377 YLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQL 436
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER---MERNGCKMSTD 432
+ + L EM +G C PN +T N LL L ++ LE M+++ KM D
Sbjct: 437 GNLNAALDLLQEM-ISSGVC-PNVVTCNTLLDGLCNNGKLKDALEMFKVMQKS--KMDLD 492
Query: 433 -------------TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
TYN+++ +N + +EEM +G+ PD +Y +I GL +
Sbjct: 493 ASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQ 552
Query: 480 GRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
RL++A F M KG P+ T + + K+ G+ + ++ G+ NA
Sbjct: 553 SRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANA 609
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 162/352 (46%), Gaps = 20/352 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP F+ +++ L + +F E ++++EM + N TY +++ ++ + ++ A
Sbjct: 315 SPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAER 374
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+F G D+ F L+ C K V+ + E + + T +++G+C
Sbjct: 375 MFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFC 434
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR----- 323
LGN+ A +++I S P+ VT T ++ L GKL AL +F+ M +
Sbjct: 435 QLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDAS 494
Query: 324 ------KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
+PDV T N +I L + + EA E+ EM +RG +P+ TYNS+I LCK R
Sbjct: 495 HPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSR 554
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTY 434
++ + D M K S P+ +TF L+ K V LE M R G + TY
Sbjct: 555 LDEATQMFDSMGSKGFS--PDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITY 612
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
++ + + ++EM G+ PD + M+ GL+ K L+ A+
Sbjct: 613 RTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 664
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 165/377 (43%), Gaps = 26/377 (6%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
+E SP +N +++ + R+ E ++ EM PD+V T+ +L+N
Sbjct: 275 QEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVV---TFSVLINALVKE 331
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE-TFFESEKNEFGYDIKTM 260
EA +++ G + + + +++ + ++ AE F+ D+ T
Sbjct: 332 GKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITF 391
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+I+++G+C V + + ++ + +++TY T ++ + G L AL L Q M
Sbjct: 392 SILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMIS 451
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR-----------GCLPNVTTYNSLI 369
G P+VVTCN ++D LC ++ +ALE+ + M+ P+V TYN LI
Sbjct: 452 SGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILI 511
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
L + E +EM + +P+ IT+N ++ L K +E + + M G
Sbjct: 512 CGLINEGKFSEAEELYEEMPHRG--LVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKG 569
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
T+ ++ Y + EM ++G+ + +Y +IHG G + AL
Sbjct: 570 FSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGAL 629
Query: 487 SYFHEMRLKGMVPEPRT 503
F EM G+ P+ T
Sbjct: 630 DIFQEMISSGVYPDTIT 646
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 18/294 (6%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+AA F ++ +G SP F+ ++D A+R + +++ EM + N TY
Sbjct: 370 DAAERMFYLMATKG-CSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK--- 250
L++ + + A+ + G ++ LL LC ++ A F+ +
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488
Query: 251 ---------NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
N+ D++T NI++ G G EA+ ++++ PD++TY + ++
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDG 548
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K+ +L A ++F +M KG PDVVT +I+ C R+ + LEV EM RG + N
Sbjct: 549 LCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVAN 608
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
TY +LI C++ + + EM + P+ IT +L L EE+
Sbjct: 609 AITYRTLIHGFCQVGNINGALDIFQEM--ISSGVYPDTITIRNMLTGLWSKEEL 660
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 101/229 (44%), Gaps = 10/229 (4%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + +++S+ P + + + + + + + L + M + ++ + +I
Sbjct: 59 DAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILI 118
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
C ++P AL ++ G P++ T+++L+ LC R+ + ++
Sbjct: 119 KCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI------ 172
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
C PN I F L+ L + E +L+RM +G + + TY I+
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232
Query: 452 HTWEEMEKKG-MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +ME+ + P+ Y+ +I GL+ GR DA + F EM+ KG+ P
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISP 281
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 178/379 (46%), Gaps = 24/379 (6%)
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVEL----IQVFDEMPDLVNEKTYGILL 195
+ + R D SP + + LD+ R R +L + +F +T+ I+
Sbjct: 89 HALLRLPERSRDLSPCT--VDLALDLAARLRHPRQLTSSILALFPRHGLAFTPRTFPIMF 146
Query: 196 NRYAAAHM-VEEAIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
R+A +H + A+ F + G DL F +LL L + +H A + + + F
Sbjct: 147 ERFAVSHRRPDHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRALERRF 206
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
D T N + +GWC + + A + +++S P TY + + G+L A
Sbjct: 207 PPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWD 266
Query: 314 LFQAMWEKGR-----KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
F M ++G KPDVV+ ++ L ++ +A +V EM GC P++ TYN+L
Sbjct: 267 FFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNAL 326
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN 425
I+ CK +E D+M +K +PN +T+ L++ L K + +L++M+R
Sbjct: 327 IQVTCKKGNVEDAVAVFDDMIRKG--YIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKRE 384
Query: 426 GCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLE 483
GC+ + TYNV++ L+ D E K H +E M K + P+Q +Y ++I ++ + R E
Sbjct: 385 GCEPNVQTYNVLIGYLFEEGDIE-KALHLFETMSKGEECLPNQDTYNIIISAMFVRKRAE 443
Query: 484 D---ALSYFHEMRLKGMVP 499
D A EM +G +P
Sbjct: 444 DMAVAARMVVEMVDRGYLP 462
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 15/282 (5%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRAR---RFVELIQVFDEM--PDLVNEKTYGI 193
A FF + R + +FN++LD L ++R + L++ + PD V TY
Sbjct: 159 AVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRALERRFPPDAV---TYNT 215
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L + + A+ + + E G + + +L R ++ A FF K
Sbjct: 216 LADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRG 275
Query: 254 G------YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
D+ + +L+G V G + +A++ + ++ + C P TY + KKG
Sbjct: 276 SNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGN 335
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A+ +F M KG P+VVT +I LC +I A+++L +MK GC PNV TYN
Sbjct: 336 VEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNV 395
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
LI +L + +E + M K CLPN+ T+N ++ ++
Sbjct: 396 LIGYLFEEGDIEKALHLFETMS-KGEECLPNQDTYNIIISAM 436
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 123/237 (51%), Gaps = 10/237 (4%)
Query: 275 EAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
A RF+ + +S D + + ++AL K G A L +A+ E+ PD VT N +
Sbjct: 158 HAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRAL-ERRFPPDAVTYNTL 216
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
D C K AL++LR+M G P TTYN ++K + +++ +++ +M+++
Sbjct: 217 ADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGS 276
Query: 394 S---CLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVN-WDC 446
+ C P+ +++ +L L + ++ V + M R GC S TYN ++++ +
Sbjct: 277 NDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNV 336
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
ED V +++M +KG P+ +YTV+I GL G+++ A+ +M+ +G P +T
Sbjct: 337 EDAV-AVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQT 392
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-----------PDLVNEKTYGILLNR 197
E +P +N IL R+ + F +M PD+V +Y +L+
Sbjct: 238 ESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVV---SYTTVLHG 294
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-- 255
A +++A VFD G ++ + L+ C+ +VE A F+ + GY
Sbjct: 295 LGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRK-GYIP 353
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
++ T +++ G C G + A + + + CEP+ TY + L ++G + AL LF
Sbjct: 354 NVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHLF 413
Query: 316 QAMWEKGRK--PDVVTCNCIIDALCFKKRIPE---ALEVLREMKNRGCLPNVTTYNSLIK 370
+ M KG + P+ T N II A+ +KR + A ++ EM +RG LP +N ++
Sbjct: 414 ETM-SKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRRFMFNRVLN 472
Query: 371 HLCKIKRMETVYEYLDEMEQK 391
L E E L M++K
Sbjct: 473 GLMLTGNQELSRELL-RMQEK 492
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 184/389 (47%), Gaps = 26/389 (6%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D + A + F + ++ P FN IL L +++ + ++ + +M P+LVN
Sbjct: 42 DVDDAVSLFNRLLQQNPTPPNIE-FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN- 99
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC-----RYKHVEVA- 242
IL+N + + A V + + G + L+ LC KH V
Sbjct: 100 --CNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGK 157
Query: 243 -----ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
+ F + D+ T I+++G+C G V EAK ++ +P VTY +
Sbjct: 158 LKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNS 217
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
++ ++ A +F M + G PD+ + + +I+ C K + EA+E+L+EM ++
Sbjct: 218 LMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQ 277
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP- 416
+PNV TY+SLI LCK ++ + +DEM + PN +T++ +L +L K +V
Sbjct: 278 IIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQP--PNIVTYSSILDALCKNHQVDN 335
Query: 417 --WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+L +M+ G + + TY +++K + R +E++ KG + +YTVMI
Sbjct: 336 AIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQ 395
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G DKG ++AL+ +M G +P +T
Sbjct: 396 GFCDKGLFDEALTLLSKMEDNGCIPNAKT 424
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 151/285 (52%), Gaps = 20/285 (7%)
Query: 165 VLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
++G+ + V+L F++M PD+ T+ IL++ + V+EA V G
Sbjct: 154 IVGKLKDAVDL---FNKMILENINPDVY---TFTILVDGFCKEGRVKEAKNVLAMMMIQG 207
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEA 276
+ + +L+ K V A++ F + + G DI++ +I++NG+C + + EA
Sbjct: 208 IKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMA-QLGVSPDIQSYSILINGFCKIKMMDEA 266
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
K++ + P+ VTY++ ++ L K GK+ AL+L M ++G+ P++VT + I+DA
Sbjct: 267 MELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDA 326
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
LC ++ A+ +L +MKN+G PN+ TY LIK LC+ ++E + +++ K +
Sbjct: 327 LCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNL- 385
Query: 397 PNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
N T+ +++ +E +L +ME NGC + TY +I+
Sbjct: 386 -NVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIII 429
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 12/247 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
PG +N+++D ++ + +F+ M PD+ ++Y IL+N + M++EA
Sbjct: 210 PGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDI---QSYSILINGFCKIKMMDEA 266
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+ + + ++ + +L+ LC+ + A + E ++ G +I T + IL+
Sbjct: 267 MELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVD-EMHDRGQPPNIVTYSSILD 325
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C V A + +P+ TY + L + GKL A ++F+ + KG
Sbjct: 326 ALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNL 385
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+V T +I C K EAL +L +M++ GC+PN TY +I L K E + L
Sbjct: 386 NVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLL 445
Query: 386 DEMEQKN 392
EM + N
Sbjct: 446 CEMIETN 452
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 7/220 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A + F +++ G SP ++ +++ + + E +++ EM + N TY L+
Sbjct: 231 AKSIFNTMAQLG-VSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLI 289
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FG 254
+ + + A+ + D + G+ ++ + ++L LC+ V+ A KN+
Sbjct: 290 DGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQ 349
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T I++ G C G + +A++ ++D++ + TY + KG AL L
Sbjct: 350 PNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTL 409
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE-VLREM 353
M + G P+ T II +L FKK E E +L EM
Sbjct: 410 LSKMEDNGCIPNAKTYEIIILSL-FKKDENEMAEKLLCEM 448
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P +++++D L ++ + +++ DEM D N TY +L+ H V+ AI +
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIAL 339
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCV 269
+ K G ++ + L+ LC+ +E A FE ++ T +++ G+C
Sbjct: 340 LTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCD 399
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G EA + + C P++ TY + +L KK + A +L M E V
Sbjct: 400 KGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVAL 459
Query: 330 CNCIIDAL 337
N +I ++
Sbjct: 460 TNDLIASI 467
>gi|293336637|ref|NP_001167760.1| hypothetical protein [Zea mays]
gi|223943823|gb|ACN25995.1| unknown [Zea mays]
gi|414877894|tpg|DAA55025.1| TPA: hypothetical protein ZEAMMB73_945476 [Zea mays]
Length = 536
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 177/389 (45%), Gaps = 21/389 (5%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF----- 172
+ L+ +++ NV+N A T+F W P + N ++ LGR + F
Sbjct: 98 MALSPEVLANVVNTSNLSGAATVTYFDWAVTNSKPPPSVHTCNIVIRALGRKKFFDYLDD 157
Query: 173 -VELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG-----ELDDLSAF 226
+++++ + PDL T I+++ AA V A+ V +FG AF
Sbjct: 158 ALQIMRRNNIFPDLT---TLEIIMDSLVAARHVSRAVEVIST-DQFGFGIGKTCHRKDAF 213
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
L+ LCR HV +A + ++ + E FG D N ++ GW G+V + + W + +
Sbjct: 214 TILIRCLCRRSHVGLASSLLQAARKELFGLDSNVYNDVMGGWARFGSVDKLQEVWTKMQE 273
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
P+ V++ + L + G+ AL+ F+ M + P + N +I +
Sbjct: 274 DGLVPNEVSHCHLIEGLGRVGQTEDALKAFEYMVHERYGPTTMAYNVLIFNFIHIGDLDS 333
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE---ITF 402
++ ++M ++ C PN+ TY+ +IK + +R+ + D+M + LPN +F
Sbjct: 334 CIKYYKDMLDKNCSPNIETYSKMIKAFLRGRRVADALQMFDDMLIQG--VLPNTGMITSF 391
Query: 403 NYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
L + P + ++ + GC +S Y ++L+ + V WEEM++ G
Sbjct: 392 INPLCTFGPPHAALMIYKKSRKAGCVISLKAYKLLLERLAKFGKSGIVLDIWEEMQECGY 451
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
PD+ Y +++GL + G+++ A+S E
Sbjct: 452 QPDKEIYEFIVNGLCNVGKVDAAVSVVEE 480
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N C G + A +K K+ C Y + L K GK G L +++ M E G
Sbjct: 392 INPLCTFGPPHAALMIYKKSRKAGCVISLKAYKLLLERLAKFGKSGIVLDIWEEMQECGY 451
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLRE-MKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+PD I++ LC ++ A+ V+ E ++N CL V Y+ L L ++ ++ET Y
Sbjct: 452 QPDKEIYEFIVNGLCNVGKVDAAVSVVEESLRNGFCLGRV-VYSKLNNKLLEMDKVETAY 510
Query: 383 EYLDEMEQ 390
+++
Sbjct: 511 NLFKKVKH 518
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIG 209
SP ++ ++ R RR + +Q+FD+M L N +N A+
Sbjct: 347 SPNIETYSKMIKAFLRGRRVADALQMFDDMLIQGVLPNTGMITSFINPLCTFGPPHAALM 406
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGW 267
++ + ++ G + L A++ LL L ++ + +E E E GY D + I+NG
Sbjct: 407 IYKKSRKAGCVISLKAYKLLLERLAKFGKSGIVLDIWE-EMQECGYQPDKEIYEFIVNGL 465
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
C +G V A ++ +++ V Y+ N L + K+ TA LF+
Sbjct: 466 CNVGKVDAAVSVVEESLRNGFCLGRVVYSKLNNKLLEMDKVETAYNLFK 514
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 172/359 (47%), Gaps = 25/359 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +N+++ L +A R E + +EM PD+ TY L+ + + ++A
Sbjct: 113 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIF---TYTTLITGFCKSKKSDDA 169
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILN 265
+ VF++ G D+ + L+ LC+ ++ A F + + T N +++
Sbjct: 170 LRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLIS 229
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C +G + EA + + ++ PD VTY T +N K +L A L M KG P
Sbjct: 230 GFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 289
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY- 384
DVVT ++D LC + R+ +A+ +L EM+ + C P V TYN+++ C+ ++E ++
Sbjct: 290 DVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLY 441
L+EM+ C PN ++FN +++ L K E ++E R C Y ++
Sbjct: 350 LEEMD-----CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Query: 442 VNWDCEDKVRHTWEEM-EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ + +M E+ G P+ +Y+ ++ GL + G L+ A Y KG VP
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIE----KGCVP 459
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 164/371 (44%), Gaps = 80/371 (21%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLG------RARRFVELIQVFDEMPDLVNEK 189
E A F + +G + P + A++ L AR+F+E + + P++V
Sbjct: 27 LEQALIFLGKMVSKG-FHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVV--- 82
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY +L++ V+EA+ + + R K V A T+
Sbjct: 83 TYTVLIDGLCKGGRVDEAVALLSKM--------------------RKKCVPTAVTY---- 118
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
N +++G C EA ++++ S C PD TY T + K K
Sbjct: 119 -----------NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL-REMKNRGCLPNVTTYNSL 368
ALR+F+ + +G +PDVVT +C+ID LC + R+ EA+++ R +K+ C+PN TYNSL
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
I C++ +M+ L+ M + S P+ +T+ L+ K L R++
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSS--PDVVTYTTLMNGFCK-------LARLD----- 273
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
D Y+++ +M +KG+ PD ++T ++ GL + RL DA+
Sbjct: 274 ---DAYDLL-----------------NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313
Query: 489 FHEMRLKGMVP 499
EMR K P
Sbjct: 314 LGEMRRKSCSP 324
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 108/217 (49%), Gaps = 6/217 (2%)
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ + C D VTY + + L K +L AL M KG PDV T +I ALC + R
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ EA + L EM NR PNV TY LI LCK R++ L +M +K C+P +T+
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK---CVPTAVTY 118
Query: 403 NYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
N L+ L K E E +LE M +GC TY ++ + D +E++
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+G PD +Y+ +I GL +GRL++A+ F M G
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 42/289 (14%)
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
N D T ++ G C + + +A F ++ PD TY ++AL + +L
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A + + M + P+VVT +ID LC R+ EA+ +L +M+ + C+P TYNSLI
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLIS 123
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLE------- 420
LCK +R Y+ L+EM C+P+ T+ L+ KK ++ V E
Sbjct: 124 GLCKAERASEAYDLLEEMVYS--GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 181
Query: 421 ----------------------------RMERNG-CKMSTDTYNVILKLYVNWDCEDKVR 451
RM ++G C +T TYN ++ + D+
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ E M + G PD +YT +++G RL+DA ++M KG+ P+
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 44/293 (15%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F + + G P + +N+++ R + E + + + M PD+V TY
Sbjct: 204 AIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV---TYT 260
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKN 251
L+N + +++A + ++ G D+ F +L+ LCR + + E +
Sbjct: 261 TLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N IL+G+C + EA++F + + C P+ V++ + L K + A
Sbjct: 321 SCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEA 378
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN---------------- 355
+ L + + PDVV +ID LC +K++ EA V R+M
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVT 438
Query: 356 ----------------RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+GC+PN+ TYN LI K R E E LD+M Q+
Sbjct: 439 GLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 200/439 (45%), Gaps = 44/439 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
EA F + V E +P FN +++ L R +E + ++M ++ TYG
Sbjct: 209 EAVALFDQMV--EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
++N + A+ + + +E D+ + ++ LC+ H A+ F SE E
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF-SEMLEK 325
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G ++ T N +++G+C G +A+R +D+I+ + PD +T+ ++A K+GKL A
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 312 LRL-------------------------------FQAMWEKGRKPDVVTCNCIIDALCFK 340
+L + M++ PDVVT N IID C
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRA 445
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
KR+ E +++LRE+ RG + N TTYN+LI C++ + + EM +G C P+ I
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM-ISHGVC-PDTI 503
Query: 401 TFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T N LL +K EE + E ++ + + T YN+I+ D+ + +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517
G+ PD ++Y VMI G K + DA FH+M+ G P+ T + +K E
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Query: 518 GEQGKKVIKLTSLGLKGNA 536
+ + + ++ S G G+A
Sbjct: 624 DKSIELISEMRSNGFSGDA 642
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 156/364 (42%), Gaps = 57/364 (15%)
Query: 183 PDLV--NEKTYGILL-NRYAAA-----HMVE----EAIGVFDRRKEFGELDDLSAFQNLL 230
PD+V N +G+ L +R + A +MVE EA+ +FD+ E G + F L+
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 231 LWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
LC V E A + D+ T I+NG C +G+ A + ++ +
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD V Y+ ++ L K G A LF M EKG P+V T NC+ID C R +A +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 350 LR-----------------------------------EMKNRGCLPNVTTYNSLIKHLCK 374
LR EM +R P+ TYNS+I CK
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMST 431
R + D M P+ +TFN ++ K+ +E +L + R G +T
Sbjct: 414 HNRFDDAKHMFDLMAS------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TYN ++ + D + + ++EM G+ PD + ++++G + +LE+AL F
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 492 MRLK 495
+++
Sbjct: 528 IQMS 531
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 169/431 (39%), Gaps = 64/431 (14%)
Query: 130 NRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-----PD 184
+ Y + A FF ++ R + + N ++ V R R I ++ +M P
Sbjct: 81 SHYFKSLDDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIP- 138
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
+N ++ IL+ + H + ++ F + + G D+ F LL LC + A
Sbjct: 139 -LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA 197
Query: 245 FFE--------------SEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
F + E G + T N ++NG C+ G V EA ++
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
D VTY T VN + K G +AL L M E KPDVV + IID LC +A
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ EM +G PNV TYN +I C R L +M ++ + P+ +TFN L+ +
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN--PDVLTFNALISA 375
Query: 409 LKK--------------------PEEVPWVLERMERNGCK--------------MSTD-- 432
K P+ V + M CK S D
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTY--NSMIYGFCKHNRFDDAKHMFDLMASPDVV 433
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
T+N I+ +Y D+ E+ ++G+ + +Y +IHG + L A F EM
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 493 RLKGMVPEPRT 503
G+ P+ T
Sbjct: 494 ISHGVCPDTIT 504
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 115/273 (42%), Gaps = 8/273 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP FN I+DV RA+R E +Q+ E+ + N TY L++ + + A
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWC 268
+F G D LL C + +E A FE + ++ D NII++G C
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
V EA + + EPD TY ++ K + A LF M + G +PD
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N +I I +++E++ EM++ G + T + +C++ E + YL
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLRPK 668
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER 421
S +P + L + L E PW+L R
Sbjct: 669 INGETSSIPRYVV--ELAEELYTVE--PWLLPR 697
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 20/205 (9%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
L A+ F M V CN +I R A+ + R+M+ R N+ ++N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNG 426
LIK C ++ ++ + P+ +TFN LL L + + E + G
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQ--PDVVTFNTLLHGLCLEDRIS---EALALFG 200
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ T + +++M + G+ P ++ +I+GL +GR+ +A
Sbjct: 201 YMVETGFLEAVA--------------LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 487 SYFHEMRLKGMVPEPRT-GILVNDM 510
+ ++M KG+ + T G +VN M
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGM 271
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 190/410 (46%), Gaps = 59/410 (14%)
Query: 152 YSPGSNVFNAILDVLG-----RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
Y+P +NA+L L ARRF+ + P N TY IL+ A +EE
Sbjct: 114 YAPSVPAYNAVLLALSDASLPSARRFLSSMLRHGVAP---NVYTYNILVRALCARGRLEE 170
Query: 207 AIGVF-DRRK------------------EFGELD-----------------DLSAFQNLL 230
A+GV D R GELD +L F +++
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230
Query: 231 LWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
LC+ +E A F+ E D+ + N +L+G+C +G ++E+ + ++ +
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD VT+ + ++A K G L A+ L M E+G + + VT +ID C K + +AL
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+ EM+ G P+V YN+LI CK+ RM+ E + EME K P+ +T++ ++
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK--PDVVTYSTIISGY 408
Query: 410 KKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDK----VRHTWEEMEKKGM 462
K + ++M + G TY+ +++ CE+K +E M + G+
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR----GLCEEKRLNDACELFENMLQLGV 464
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMN 511
PD+ +YT +I G +G +E ALS EM KG++P+ T +L+N ++
Sbjct: 465 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 185/431 (42%), Gaps = 65/431 (15%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
+ + A + EG+ P FN++++ L +A R +VFDEM PD+V
Sbjct: 202 ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVV-- 259
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA------ 242
+Y LL+ Y + E++ VF + G + D+ F +L+ C+ ++E A
Sbjct: 260 -SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 243 ---------ETFFESEKNEF---GY------------------DIKTMNIILNGWCVLGN 272
E F + + F G+ + N ++NG+C LG
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+ A+ +++ + +PD VTY+T ++ K G L +A +L Q M +KG PD +T +
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+I LC +KR+ +A E+ M G P+ TY +LI CK +E DEM +K
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498
Query: 393 GSCLPNEITFNYLLKSLKKP----------------EEVPWVLERMERNGCKMSTDTYNV 436
LP+ +T++ L+ L K + VP ++ C + +V
Sbjct: 499 --VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSV 556
Query: 437 I--LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+ LK + + ++ M + D Y+++IHG G + ALS+ +M
Sbjct: 557 VALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR 616
Query: 495 KGMVPEPRTGI 505
G P + I
Sbjct: 617 SGFSPNSTSTI 627
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 148/299 (49%), Gaps = 7/299 (2%)
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLL-WLCRYKHVEVAETFFESE-KNEFGYDIKTMNII 263
+A+ ++ E L + N+L+ C +HV++ + K I T +
Sbjct: 108 DAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTL 167
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+NG C G +A + D++ C+PD TY T +N L K G+ A L + M E G
Sbjct: 168 INGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGC 227
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+PDVVT + +ID+LC + + EAL++ MK +G P V +Y SLI+ LC R +
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKL 440
L+EM N +P+ +TF+ L+ K E VL+ M G + + TYN ++
Sbjct: 288 MLNEMTSLN--IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHG 345
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
Y + R ++ M +G PD SY+++I+G R+++A F+EM +G+ P
Sbjct: 346 YSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTP 404
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 157/321 (48%), Gaps = 9/321 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEV 241
PD+V TY L++ +V EA+ +F K G + ++ +L+ LC + E
Sbjct: 229 PDVV---TYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEA 285
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ E DI T +++++ +C GNV EA+ K + + EP+ +TY + ++
Sbjct: 286 SAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHG 345
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+ + ++ A +LF M +G KPDV + + +I+ C KRI EA ++ EM ++G PN
Sbjct: 346 YSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPN 405
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WV 418
+Y +LI C++ ++ E +M NG LP+ T++ LL+ K + +
Sbjct: 406 TVSYTTLIHAFCQLGKLREARELFKDM-HTNGY-LPDLCTYSVLLEGFCKQGYLGKAFRL 463
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
M+ K + Y +++ + R + E+ G+ PD + YT +I+GL
Sbjct: 464 FRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCK 523
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
+G L++AL F +M G P
Sbjct: 524 EGLLDEALEAFRKMEEDGCPP 544
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 160/357 (44%), Gaps = 15/357 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P F +++ L +A F + +++FD+M PD+ TY ++N A
Sbjct: 159 PTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVY---TYTTIINGLCKMGETAAA 215
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
G+ + E G D+ + L+ LC+ + V A F K + + + ++ G
Sbjct: 216 AGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQG 275
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C EA ++ PD VT++ ++ K+G + A + + M E G +P+
Sbjct: 276 LCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V+T N ++ + + EA ++ M RGC P+V +Y+ LI C +KR++ + +
Sbjct: 336 VITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFN 395
Query: 387 EMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM + + PN +++ L+ + L K E + + M NG TY+V+L+ +
Sbjct: 396 EMIHQGLT--PNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCK 453
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
K + M+ + P+ YT++I + G L A F E+ + G+ P+
Sbjct: 454 QGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPD 510
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 119/246 (48%), Gaps = 10/246 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N+++ VE ++FD M PD+ +Y IL+N Y ++EA
Sbjct: 334 PNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVF---SYSILINGYCMVKRIDEA 390
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNG 266
+F+ G + ++ L+ C+ + E E F + N + D+ T +++L G
Sbjct: 391 KQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEG 450
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C G + +A R ++ + + +P+ V Y ++++ K G L A +LF ++ G +PD
Sbjct: 451 FCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPD 510
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V II+ LC + + EALE R+M+ GC PN +YN +I+ + K + +
Sbjct: 511 VQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIG 570
Query: 387 EMEQKN 392
EM K
Sbjct: 571 EMRDKG 576
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 124/273 (45%), Gaps = 14/273 (5%)
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA-LRLFQAMWEKGRKPDVVTC 330
N+ +A + ++ K P + + ++A+ + + A + L + M G P+ T
Sbjct: 70 NIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTL 129
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +I+ C + + VL ++ G P + T+ +LI LCK E D+M
Sbjct: 130 NILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVA 189
Query: 391 KNGSCLPNEITFNYLLKSLKKPEE---VPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ C P+ T+ ++ L K E ++++M GC+ TY+ + ++ C+
Sbjct: 190 RG--CQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTL----IDSLCK 243
Query: 448 DKVRH----TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D++ + + M+ KG+ P SYT +I GL R ++A + +EM ++P+ T
Sbjct: 244 DRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVT 303
Query: 504 GILVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
L+ D+ K E + +T +G++ N
Sbjct: 304 FSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNV 336
>gi|115455091|ref|NP_001051146.1| Os03g0728200 [Oryza sativa Japonica Group]
gi|50428716|gb|AAT77067.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108710874|gb|ABF98669.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113549617|dbj|BAF13060.1| Os03g0728200 [Oryza sativa Japonica Group]
Length = 601
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 3/276 (1%)
Query: 238 HVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
HV VAE E + ++ +L GWC +G + EAK + ++ PD V + T
Sbjct: 176 HVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNT 235
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+ G+ A L + M +G P+ V+ ++ L + R+ EA+ V EM+ +G
Sbjct: 236 LLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKG 295
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP--EEV 415
C P+ TY +L+ CK R+ YE+LD M + G + + + + KK EE
Sbjct: 296 CAPDSVTYGTLVTAFCKAGRISQGYEFLDVM-AREGLRVDAGVYLGFFVAHEKKEQLEEC 354
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
++ERM C YNV+++L + W EME + P ++ +M+ G
Sbjct: 355 LELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTG 414
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
L +G L +A YF +M +G+ P+ G+L + +N
Sbjct: 415 LVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLN 450
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 167/361 (46%), Gaps = 20/361 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P N FN ++ R R +E ++ D M P N+ TYG L++ ++EA
Sbjct: 278 PDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTP---NDMTYGYLMHGLCKTCRIDEA 334
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+ + ++ F L+ R + A F + GY D+ T + ++N
Sbjct: 335 QALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVN 390
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G A D+ C+P+ TY ++ KKG+L A + + M KG
Sbjct: 391 GLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSL 450
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ V N +I ALC +I EAL++ EM ++GC P++ T+NSLI LC++ ME
Sbjct: 451 NTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALY 510
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYV 442
+M + + N +TFN L+ + + E+ L+ M GC + TYN ++K
Sbjct: 511 RDMVLE--GVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALC 568
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+K +EEM +KG+ P + ++I+G G++ +AL + +M +G P+
Sbjct: 569 KTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIV 628
Query: 503 T 503
T
Sbjct: 629 T 629
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 170/376 (45%), Gaps = 23/376 (6%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKT 190
D E + FKW + Y +V+ ++D LG A F + ++ +M + + E
Sbjct: 82 LDVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESL 141
Query: 191 YGILLNRYAAAHMVEEAIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE-TFFES 248
+ +++ Y A + +A + D + + ++ +L L VA F++
Sbjct: 142 FILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDM 201
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ T +++ C++ V A +D+ K C P+S+ Y T ++AL+K+ ++
Sbjct: 202 LSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRV 261
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL+L + M+ G PDV T N +I C R+ E +++ M +G PN TY L
Sbjct: 262 DEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYL 321
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK----PEEVPWVLERMER 424
+ LCK R++ L ++ PN + FN L+ + E +V ++M
Sbjct: 322 MHGLCKTCRIDEAQALLSKVPG------PNVVHFNTLVNGFVRNGRLNEATAFVYDKMIN 375
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE----MEKKGMGPDQRSYTVMIHGLYDKG 480
NG T++ + VN C+ + + E M+ KG P+ +YT++I G KG
Sbjct: 376 NGYVPDVFTFSTL----VNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKG 431
Query: 481 RLEDALSYFHEMRLKG 496
+LE+A EM KG
Sbjct: 432 QLEEAGLILREMLTKG 447
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 139/292 (47%), Gaps = 9/292 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P N + ++D + + E + EM +N Y L++ + EA+ +
Sbjct: 415 PNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDM 474
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
F G D+ F +L+ LCR +E A + E + T N +++ +
Sbjct: 475 FGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLR 534
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA + D++ C D +TY + AL K G + L LF+ M KG P ++T
Sbjct: 535 RGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIIT 594
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
CN +I+ C ++ ALE +R+M +RG P++ TYNSLI LCK R++ ++++
Sbjct: 595 CNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQ 654
Query: 390 QKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
+ P+ IT+N L+ L + ++ ++L R NG + T+N+++
Sbjct: 655 AEGIQ--PDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 5/240 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILL 195
A F +S +G P FN+++ L R + + ++ +M + N T+ L+
Sbjct: 471 ALDMFGEMSSKG-CKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLI 529
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFG 254
+ + ++EA+ + + G D + L+ LC+ VE FE +
Sbjct: 530 HAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLT 589
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
I T NI++NG+C G V+ A F +D+I PD VTY + +N L K+G++ AL L
Sbjct: 590 PSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNL 649
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F+ + +G +PD +T N +I LC + +A +L G +PN T+N L+ + K
Sbjct: 650 FEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGK 709
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 91/232 (39%), Gaps = 15/232 (6%)
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG---RKPDVVTCNCIIDA 336
W K C SV Y ++ L RL M E+G R+ + +I
Sbjct: 93 WAGAQKGYCHSFSVYY-LLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFI----LIMK 147
Query: 337 LCFKKRIP-EALEVLREMKNRGCL-PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ +P +A +L +MK C P+ +YN ++ L +M K S
Sbjct: 148 YYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVS 207
Query: 395 CLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
PN+ TF ++K+L EV +L M ++GC ++ Y ++ D D+
Sbjct: 208 --PNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEAL 265
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
EEM G PD ++ +I+G R+ + M LKG P T
Sbjct: 266 KLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMT 317
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 175/377 (46%), Gaps = 28/377 (7%)
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGILLNRYAA 200
KW G Y G F ++++ + F L Q+ +M + EK++ I+ Y
Sbjct: 57 KW----GSYKLGDLSFYSLIENFSNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGK 112
Query: 201 AHMVEEAIGVFDRR-KEFGELDDLSAFQNLL----------LWLCRYKHVEVAETFFESE 249
AH+ ++A+ +F R EF + +F +L L L Y HV + +F +
Sbjct: 113 AHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQ 172
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
N + N+++ C +GNV +A ++ + C D TY+T ++ L +G++
Sbjct: 173 PNGLSF-----NLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRID 227
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+ L M +G P+ V N +I ALC K + A +++ M +GC+PN TYNSL+
Sbjct: 228 EAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLV 287
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNG 426
LC +++ L+ M C+PN+ITF L+ K VL +E G
Sbjct: 288 HGLCLKGKLDKAMSLLNRMVAN--KCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKG 345
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ + +Y+ ++ + W+EM +KG P+ Y+ +I GL +G+ ++A
Sbjct: 346 YRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAK 405
Query: 487 SYFHEMRLKGMVPEPRT 503
Y EM+ KG P T
Sbjct: 406 EYLIEMKNKGHTPNSFT 422
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 173/417 (41%), Gaps = 59/417 (14%)
Query: 136 WEAAYTFFKWVSREGDYS---PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEK 189
++ A F+ V +S P FN ++ L R + ++VF M D + +
Sbjct: 152 FDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGY 211
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY L++ ++EA+ + D + G + AF L+ LC+ + A ++
Sbjct: 212 TYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNM 271
Query: 250 ------KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
NE Y N +++G C+ G + +A ++ +KC P+ +T+ T V+
Sbjct: 272 FLKGCVPNEVTY-----NSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFV 326
Query: 304 KKGKLGTALR-----------------------------------LFQAMWEKGRKPDVV 328
K G+ +R L++ M EKG KP+ +
Sbjct: 327 KHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTI 386
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+ +ID LC + + EA E L EMKN+G PN TY+SL+ + + EM
Sbjct: 387 VYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEM 446
Query: 389 EQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ C +E+ ++ L+ L K +E V ++M G K+ Y+ ++ + N
Sbjct: 447 TDND--CNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQ 504
Query: 446 CEDKVRHTWEEM--EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++ + +M + PD +Y ++++ K + A+ + M +G P+
Sbjct: 505 LVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPD 561
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 40/253 (15%)
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR----KPDVVTCNCIIDALCFKKRI 343
C+ ++ T +N + ++G AL + + + +P+ ++ N +I ALC +
Sbjct: 132 CKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNV 191
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
+A+EV R M +R C+ + TY++L+ LC R++ LDEM Q G+ PN + FN
Sbjct: 192 DQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM-QVEGT-FPNPVAFN 249
Query: 404 YLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
L+ +L K ++ + + M KG
Sbjct: 250 VLISALCKKGDL--------------------------------SRASKLVDNMFLKGCV 277
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGK 522
P++ +Y ++HGL KG+L+ A+S + M VP T G LV D +K + +
Sbjct: 278 PNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLV-DGFVKHGRALDGVR 336
Query: 523 KVIKLTSLGLKGN 535
++ L G +GN
Sbjct: 337 VLVSLEEKGYRGN 349
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 117/278 (42%), Gaps = 44/278 (15%)
Query: 154 PGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P F ++D GRA V ++ +E NE +Y L++ E + +
Sbjct: 313 PNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQL 372
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK--TMNIILNGWC 268
+ E G + + L+ LCR + A+ + KN+ G+ T + ++ G+
Sbjct: 373 WKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNK-GHTPNSFTYSSLMWGYF 431
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK---- 324
G++++A WK++ + C V Y+ +N L K GKL AL +++ M +G K
Sbjct: 432 EAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVV 491
Query: 325 ---------------------------------PDVVTCNCIIDALCFKKRIPEALEVLR 351
PDVVT N +++A C K + A+++L
Sbjct: 492 AYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILN 551
Query: 352 EMKNRGCLPNVTTYNSLIKHL-CKIKRMETVYEYLDEM 388
M ++GC P+ T + +K L + + E+LDE+
Sbjct: 552 TMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDEL 589
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 28/263 (10%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + V++A++D L R + E + EM + N TY L+ Y A + +AI V
Sbjct: 383 PNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILV 442
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
+ + + L+ LC+ ++ A ++ + D+ + +++G+C
Sbjct: 443 WKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCN 502
Query: 270 LGNVYEAKRFWKDII--KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
V + + + ++ K +PD VTY +NA K + A+ + M ++G PD
Sbjct: 503 AQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDF 562
Query: 328 VTCNCIIDAL---------------------CFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+TC+ + L ++R A ++ M + LP +T+
Sbjct: 563 ITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWA 622
Query: 367 SLIKHLCK-IKRMETVYEYLDEM 388
++ LCK +K +T+ E M
Sbjct: 623 LAVQQLCKPMKVRKTISECQSRM 645
>gi|125560868|gb|EAZ06316.1| hypothetical protein OsI_28549 [Oryza sativa Indica Group]
Length = 326
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 149/294 (50%), Gaps = 10/294 (3%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC-VLGNVYEAKRFW 280
D + F +LL LC+ K++E AE K F + NIIL+GWC V+ ++ EAKR W
Sbjct: 9 DQTVFYSLLRALCKNKNIEDAEELLLMRKKFFPLTAEGFNIILDGWCNVITDIAEAKRIW 68
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+++ PD +Y V+ K G L LR++ M ++G P + N +I L +
Sbjct: 69 REMSNYCITPDGTSYTLMVSCFAKVGNLFDTLRVYDEMKKRGWTPSIAVYNSLIYVLTKE 128
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
+ +A + + + G PNV TYNS+I LC+ ++++ L++M K +P +
Sbjct: 129 NCMKDAQNIFTRIIDEGLQPNVKTYNSMIVPLCESRKLDEARMVLEDMMLK--GIVPTIL 186
Query: 401 TFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
T++ L+ + +E +L++M+ +GC +DT+ +++ + + W EM++
Sbjct: 187 TYHTFLRQ-ENIDETLKLLKKMKDDGCGPKSDTFLMLIDRFFQLNEPGHALKLWNEMKRY 245
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP------RTGILVN 508
+ P Y ++ GL G +E AL Y+ EM+ G +P RT +L N
Sbjct: 246 DIRPSYSHYMSVVQGLIKHGCMERALEYYDEMKENGFASDPKLEKEFRTFLLAN 299
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 148/299 (49%), Gaps = 8/299 (2%)
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGW 267
V DR+ E D+ + L+ C V A + E G D+ T N+++NG
Sbjct: 3 VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLD-EMGSRGCKPDVVTYNVLVNGM 61
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G + EA +F + +P+ +T+ + ++ G+ A +L M KG P V
Sbjct: 62 CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT N +I+ LC K + A+++L +M GC PN +YN L+ CK K+M+ +YL+
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNW 444
M + C P+ +T+N +L +L K +V +E ++ GC TYN ++
Sbjct: 182 MVSRG--CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKV 239
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ EM KG+ PD +Y+ +I GL +G++E+A+ +FH++ G+ P T
Sbjct: 240 GKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFT 298
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 164/354 (46%), Gaps = 42/354 (11%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD++ TY IL+ A V +A+ + D G D+ + L+ +C+ ++ A
Sbjct: 14 PDVI---TYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEA 70
Query: 243 ETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
F S + +G ++ T NIIL C G +A++ ++++ C P VT+ +N
Sbjct: 71 IKFLNSMPS-YGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILIN 129
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L +KG LG A+ + + M G P+ ++ N ++ C +K++ A++ L M +RGC P
Sbjct: 130 FLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYP 189
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL------------------------ 396
++ TYN+++ LCK +++ E L+++ K S +
Sbjct: 190 DIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELL 249
Query: 397 ---------PNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
P+ IT++ L+ L K EE +E G K + TYN I+
Sbjct: 250 HEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKA 309
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D+ M KG P + SYT++I G+ ++G ++AL +E+ +G+V
Sbjct: 310 QQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 5/257 (1%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
W A + R+G SP FN +++ L R I + ++MP N +Y
Sbjct: 102 WMDAEKLLTEMVRKG-CSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYN 160
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
LL+ + ++ AI + G D+ + +L LC+ V+ A E +
Sbjct: 161 PLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSK 220
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N +++G +G +A ++ +PD +TY++ + L+++GK+ A
Sbjct: 221 GCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEA 280
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++ F + G KP+ T N I+ LC ++ A++ L M ++GC P +Y LI+
Sbjct: 281 IKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEG 340
Query: 372 LCKIKRMETVYEYLDEM 388
+ + E L+E+
Sbjct: 341 IANEGLAKEALELLNEL 357
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 86/224 (38%), Gaps = 39/224 (17%)
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK-------------NG 393
+EVL + C P+V TY LI+ C + + LDEM + NG
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Query: 394 SC--------------------LPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMS 430
C PN IT N +L+S+ + +L M R GC S
Sbjct: 61 MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
T+N+++ + E+M G P+ SY ++HG + +++ A+ Y
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180
Query: 491 EMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKG 534
M +G P+ T N M L + G+ V L L KG
Sbjct: 181 IMVSRGCYPDIVT---YNTMLTALCKDGKVDAAVELLNQLSSKG 221
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 178/364 (48%), Gaps = 18/364 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV----NEKTYGIL 194
A F+W S ++ + + A++ L RRF + +V DEMP + +E + +
Sbjct: 110 ALQTFRWASNLPNFIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTI 169
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE--KNE 252
+ A MV + I V D +FGE L F ++L L + + +++A F+ + N
Sbjct: 170 VRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVK-EDIDLAREFYRKKMMMNG 228
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE-PDSVTYATFVNALTKKGKLGTA 311
D T I++ G C+ + +A + + ++KS+ + P++V Y T ++AL K GK+G A
Sbjct: 229 VSGDDYTFGILMKGLCLTNRIGDAFKLLQ-VMKSRGKTPNTVIYNTMIHALCKNGKVGRA 287
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L M E P VT N +I A C ++ + +AL +L + + G +P+V T ++
Sbjct: 288 RSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGI 343
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCK 428
LCK R+ E L+ +E G + + + +N L+K L K + VL+ ME GC
Sbjct: 344 LCKAGRVTEGVEVLERVESMGG--VVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCL 401
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+ DTYN++ Y + D + +M+ G+ + +Y +I GL GR+ED
Sbjct: 402 PNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKI 461
Query: 489 FHEM 492
M
Sbjct: 462 LELM 465
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 162/388 (41%), Gaps = 38/388 (9%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+P + ++N ++ L + + + +EM + ++ T+ +L++ Y + +A+ + +
Sbjct: 265 TPNTVIYNTMIHALCKNGKVGRARSLMNEMVE-PSDVTFNVLISAYCQEENLVQALVLLE 323
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLG 271
+ G + D+ ++ LC+ V E ++ G D+ N ++ G+C+LG
Sbjct: 324 KSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLG 383
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
R KD+ C P+ TY + G L +A+ LF M G + +T +
Sbjct: 384 KAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYD 443
Query: 332 CIIDALCFKKRIPEALEVLREMKNR--GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+I LC R+ + ++L M+ G ++ YNS+I L K + E E+L +ME
Sbjct: 444 TLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKME 503
Query: 390 Q----------------KNGSCLPNEITFNYLLKSLKKPEEVPWV--------------- 418
+ GS + ++ ++K P + +V
Sbjct: 504 KLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREA 563
Query: 419 ---LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
+ M +G + T+N ++ + E+M +G PD SY+ M+
Sbjct: 564 FELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDA 623
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRT 503
L +KG + A+ F +M K ++P+ T
Sbjct: 624 LCNKGDFQKAVRLFLQMVEKDILPDYST 651
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 165 VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
+LG+A+ +++ + L N TY IL + Y + M++ AI +F+ K G +
Sbjct: 381 MLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFM 440
Query: 225 AFQNLLLWLCRYKHVE----VAETFFES-------------------EKNEFGYDIKTM- 260
+ L+ LC +E + E ES +KN+F ++ +
Sbjct: 441 TYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLT 500
Query: 261 ------------NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
++ + G+C G++ +AKR + +IK P + Y ++ + G +
Sbjct: 501 KMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNV 560
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A L M + G P T N +I A C + ++ AL+++ +M RGCLP++ +Y+ +
Sbjct: 561 REAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPM 620
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV 418
+ LC + +M +K+ LP+ T+N +L L +E W+
Sbjct: 621 VDALCNKGDFQKAVRLFLQMVEKD--ILPDYSTWNSMLLCLT--QETVWL 666
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 14/190 (7%)
Query: 340 KKRIPEALEVLREMKNRGCLPNV----TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
+K +AL+ R N LPN +TY +LI LC +R ETV E LDEM GS
Sbjct: 104 QKSASQALQTFRWASN---LPNFIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSP 160
Query: 396 LPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+E F +++ L + V VL+ + + G S +N IL + V D +
Sbjct: 161 -PDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDIDLAREF 219
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNI 512
++M G+ D ++ +++ GL R+ DA M+ +G P ++ N M
Sbjct: 220 YRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNT---VIYNTMIH 276
Query: 513 KLKERGEQGK 522
L + G+ G+
Sbjct: 277 ALCKNGKVGR 286
>gi|125544731|gb|EAY90870.1| hypothetical protein OsI_12477 [Oryza sativa Indica Group]
Length = 601
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 3/276 (1%)
Query: 238 HVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
HV VAE E + ++ +L GWC +G + EAK + ++ PD V + T
Sbjct: 176 HVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNT 235
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+ G+ A L + M +G P+ V+ ++ L + R+ EA+ V EM+ +G
Sbjct: 236 LLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKG 295
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP--EEV 415
C P+ TY +L+ CK R+ YE+LD M + G + + + + KK EE
Sbjct: 296 CAPDSVTYGTLVTAFCKAGRISQGYEFLDVM-AREGLRVDAGVYLGFFVAHEKKEQLEEC 354
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
++ERM C YNV+++L + W EME + P ++ +M+ G
Sbjct: 355 LELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTG 414
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
L +G L +A YF +M +G+ P+ G+L + +N
Sbjct: 415 LVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLN 450
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 185/382 (48%), Gaps = 19/382 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAI 208
+ P + +L L ARR+ ++ +F EM D + NE T+ +L+ + MVE AI
Sbjct: 253 FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAI 312
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN--IILNG 266
V + + G + + ++ +C+ V+ A F + +G + T++ +L G
Sbjct: 313 QVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNN-MGMYGCNPDTISYTTVLRG 371
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G AK ++++ C P+ VT+ TF+ L +KG + A++L + M E G
Sbjct: 372 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG 431
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+VT N ++ C + R+ ALE+ N C PN TY +L+ LC +R++ E L
Sbjct: 432 IVTYNALVHGFCVQGRVDSALELF---NNLPCEPNTITYTTLLTGLCHAERLDAAAELLA 488
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM QK+ C N +TFN L+ + EE ++ +M +GC + T+N +L +
Sbjct: 489 EMIQKD--CPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLD-GIT 545
Query: 444 WDC-EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
DC ++ + KG+ D +Y+ ++ L + R E+A+ H ++ GM P+
Sbjct: 546 KDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGM--RPK 603
Query: 503 TGILVNDMNIKLKERGEQGKKV 524
G + N + L +R E + +
Sbjct: 604 VG-MYNKILFALCKRCETDQAI 624
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 147/308 (47%), Gaps = 11/308 (3%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY +LL + EA+ V D + G ++ + ++ +CR V+ A+ +
Sbjct: 189 TYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEIL-NR 247
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ +G+ DI + +L G C + K + +++ KC P+ VT+ V + G
Sbjct: 248 LSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGM 307
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A+++ Q M + G P+ CN +I+A+C + R+ +A + L M GC P+ +Y +
Sbjct: 308 VERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTT 367
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMER 424
+++ LC+ R E E L EM +KN C PNE+TFN + L + E+ ++E M
Sbjct: 368 VLRGLCRAGRWEHAKELLPEMVRKN--CPPNEVTFNTFICILCQKGLIEQAIKLIELMPE 425
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
GC + TYN ++ + + +V E P+ +YT ++ GL RL+
Sbjct: 426 YGCSVGIVTYNALVHGFC---VQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDA 482
Query: 485 ALSYFHEM 492
A EM
Sbjct: 483 AAELLAEM 490
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 164/389 (42%), Gaps = 53/389 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +L+ + ++ F E + V DEM P++V TY +++N V++A
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIV---TYNVIINGMCREGRVDDA 241
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF------ESEKNEFGYDI---- 257
+ +R +G D+ ++ +L LC + + + F + NE +D+
Sbjct: 242 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 301
Query: 258 --------------------------KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
NI++N C G V +A F ++ C PD
Sbjct: 302 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+++Y T + L + G+ A L M K P+ VT N I LC K I +A++++
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 421
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
M GC + TYN+L+ C R+++ E + N C PN IT+ LL L
Sbjct: 422 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN-----NLPCEPNTITYTTLLTGLCH 476
Query: 412 PEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
E + +L M + C ++ T+NV++ + ++ +M + G P+ +
Sbjct: 477 AERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLIT 536
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ ++ G+ E+AL H + KG+
Sbjct: 537 FNTLLDGITKDCNSEEALELLHGLVSKGV 565
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 122/250 (48%), Gaps = 10/250 (4%)
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+++ C+P VTY + A+ K G A+ + M KG P++VT N II+ +C + R
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ +A E+L + + G P++ +Y +++K LC +R + V EM K C+PNE+TF
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK--CVPNEVTF 295
Query: 403 NYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
+ L++ + E VL++M ++GC +T N+++ D M
Sbjct: 296 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 355
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG- 518
G PD SYT ++ GL GR E A EM K P T N L ++G
Sbjct: 356 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVT---FNTFICILCQKGL 412
Query: 519 -EQGKKVIKL 527
EQ K+I+L
Sbjct: 413 IEQAIKLIEL 422
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 10/278 (3%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYG 192
WE A + R+ + P FN + +L G + ++LI++ E V TY
Sbjct: 378 WEHAKELLPEMVRK-NCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYN 436
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
L++ + V+ A+ +F+ E + ++ + LL LC + ++ A E E +
Sbjct: 437 ALVHGFCVQGRVDSALELFNNLP--CEPNTIT-YTTLLTGLCHAERLDAAAELLAEMIQK 493
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ + T N++++ +C G V EA +++ C P+ +T+ T ++ +TK A
Sbjct: 494 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 553
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L L + KG D +T + ++D L + R EA+++L +++ G P V YN ++
Sbjct: 554 LELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFA 613
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
LCK + ++ M NG C+PNE T+ L++ L
Sbjct: 614 LCKRCETDQAIDFFAYM-VSNG-CMPNESTYIILIEGL 649
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 153/352 (43%), Gaps = 17/352 (4%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
TL + +I + + R D AY F + G +P + + +L L RA R+ ++
Sbjct: 328 TLCNIVINAICKQGRVD--DAYDFLNNMGMYG-CNPDTISYTTVLRGLCRAGRWEHAKEL 384
Query: 179 FDEM-----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
EM P NE T+ + ++E+AI + + E+G + + L+
Sbjct: 385 LPEMVRKNCPP--NEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGF 442
Query: 234 CRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
C V+ A F + E + T +L G C + A ++I+ C ++V
Sbjct: 443 CVQGRVDSALELFNNLPCE--PNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAV 500
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ V+ +KG + A+ L M E G P+++T N ++D + EALE+L +
Sbjct: 501 TFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGL 560
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
++G + TY+S++ L + R E + L ++ P +N +L +L K
Sbjct: 561 VSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMR--PKVGMYNKILFALCKRC 618
Query: 414 EVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
E ++ M NGC + TY ++++ + + R+ E+ KG+
Sbjct: 619 ETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 670
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 172/346 (49%), Gaps = 14/346 (4%)
Query: 166 LGRARRFVELIQVFDE---MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
+G + +EL++ D PD+V Y +++ V +A ++ + D
Sbjct: 311 VGETKAALELLRRNDGKLVQPDVV---MYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPD 367
Query: 223 LSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
+ + L+ C ++ A F + KN D+ T +I+++G+C GN+ EAK
Sbjct: 368 VFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIP-DVYTFSILVDGFCKDGNIKEAKNVL 426
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
++K +PD VTY++ ++ ++ A +F M +G +V + N +I+ C
Sbjct: 427 AMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKI 486
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
K + EA+++ +EM ++ P+V TY+SLI LCK R+ E +DEM + P+ I
Sbjct: 487 KMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQ--PDII 544
Query: 401 TFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T+N +L +L K V +L +++ G + +TY +++K + R +E++
Sbjct: 545 TYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDL 604
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
KG D +YTVMI G DKG ++AL+ +M G +P+ +T
Sbjct: 605 LVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKT 650
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 6/315 (1%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ET 244
+++ +YG L+N + A+ + R D+ + ++ +C+ KHV A +
Sbjct: 296 LDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDL 355
Query: 245 FFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
+ E D+ T N +++G+C++G + +A + + PD T++ V+ K
Sbjct: 356 YSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCK 415
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
G + A + M ++ KPDVVT + ++D C + +A + M +RG NV +
Sbjct: 416 DGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQS 475
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---R 421
YN +I CKIK ++ + EM K P+ IT++ L+ L K + + LE
Sbjct: 476 YNIMINGFCKIKMVDEAMKLFKEMHHKQ--IFPDVITYSSLIDGLCKSGRISYALELVDE 533
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M G + TYN IL DK +++ +G+ PD +YT+++ GL G+
Sbjct: 534 MHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGK 593
Query: 482 LEDALSYFHEMRLKG 496
LEDA F ++ +KG
Sbjct: 594 LEDARKVFEDLLVKG 608
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 167/352 (47%), Gaps = 44/352 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +NA++ + + I +F++M PD+ T+ IL++ + ++EA
Sbjct: 366 PDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVY---TFSILVDGFCKDGNIKEA 422
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
V + D+ + +L+ C V AE+ F + + ++++ NI++NG
Sbjct: 423 KNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMING 482
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C + V EA + +K++ + PD +TY++ ++ L K G++ AL L M +G++PD
Sbjct: 483 FCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPD 542
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
++T N I+DALC K + +A+ +L ++K +G P++ TY L+K LC+ ++E +
Sbjct: 543 IITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARK--- 599
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
V E + G + Y V+++ + +
Sbjct: 600 -------------------------------VFEDLLVKGYNLDVYAYTVMIQGFCDKGL 628
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D+ +ME+ G PD ++Y ++I L++K + A EM ++G++
Sbjct: 629 FDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 134/275 (48%), Gaps = 7/275 (2%)
Query: 234 CRYKHVEVAETFFESE--KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
C K E++ + + KN + D T+ + G+C+ G +++A F +I D
Sbjct: 238 CLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLD 297
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
V+Y T +N L K G+ AL L + K +PDVV N IID +C K + +A ++
Sbjct: 298 QVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYS 357
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
E ++ P+V TYN+LI C + +++ + ++M KN +P+ TF+ L+ K
Sbjct: 358 EKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKN--IIPDVYTFSILVDGFCK 415
Query: 412 P---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
+E VL M + K TY+ ++ Y + +K + M +G+ + +S
Sbjct: 416 DGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQS 475
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
Y +MI+G +++A+ F EM K + P+ T
Sbjct: 476 YNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 510
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 18/246 (7%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
+VN +N+ A + F +S G + +N +++ + + E +++F EM
Sbjct: 450 LVNEVNK-------AESIFNTMSHRG-VTANVQSYNIMINGFCKIKMVDEAMKLFKEMHH 501
Query: 183 ----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
PD++ TY L++ + + A+ + D G+ D+ + ++L LC+ H
Sbjct: 502 KQIFPDVI---TYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHH 558
Query: 239 VEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
V+ A T K + D+ T I++ G C G + +A++ ++D++ D Y
Sbjct: 559 VDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTV 618
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+ KG AL L M E G PD T II +L K A ++LREM RG
Sbjct: 619 MIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678
Query: 358 CLPNVT 363
L +T
Sbjct: 679 LLVALT 684
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 179/374 (47%), Gaps = 14/374 (3%)
Query: 148 REGDYSPGSNVF--NAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAH 202
R GDY + N +L L + R + V+ EM VN T+ +++N
Sbjct: 184 RAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVG 243
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
++A V + K +G + + ++ C+ + A+ E + T N
Sbjct: 244 KFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFN 303
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I+++G+C NV AK+ ++++ + +P+ VTY + +N L GKL AL L M
Sbjct: 304 ILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM 363
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G KP+VVT N +I+ C KK + EA E+L ++ RG PNV T+N+LI K RM+
Sbjct: 364 GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
+ L M G C PN T+N L+ + +E + + ME NG K TYN+++
Sbjct: 424 F-LLRSMMLDTGVC-PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481
Query: 439 KLYVNWDCEDKVRHTWEE---MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
K +E MEKKG + +Y V+I G +KG+LE+A +EM K
Sbjct: 482 DALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEK 541
Query: 496 GMVPEPRTGILVND 509
G++P T ++ D
Sbjct: 542 GLIPNRTTYDILRD 555
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 22/293 (7%)
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
+KEFG + ++ F LL L K+ +S Y T I + VLG+
Sbjct: 98 QKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNST---IFHSLSVLGS- 153
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
W C +S+ V A K G++ AL F + G + ++CN +
Sbjct: 154 ------WG------CA-NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPM 200
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
+ +L + RI V +EM R NV T++ +I LCK+ + + + +++M+
Sbjct: 201 LVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGF 260
Query: 394 SCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
S P+ IT+N ++ K ++ +L+ M + T+N+++ + +
Sbjct: 261 S--PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +EEM+++G+ P+ +Y +I+GL G+L++AL +M G+ P T
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVT 371
>gi|413937640|gb|AFW72191.1| hypothetical protein ZEAMMB73_762171 [Zea mays]
Length = 503
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 179/385 (46%), Gaps = 10/385 (2%)
Query: 136 WEAAYTFFKWV-SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYG 192
W+ A FF W SR G YS + ++D+LG+ R+ + + EM LV T
Sbjct: 98 WKPALGFFLWAQSRGGGYSHTPYACSRMVDLLGKTRQIDRMWDLLSEMHCRGLVTVDTVA 157
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
+ R AAA +AI +FD+ ++ G + LL LC+ K VE+A F
Sbjct: 158 KSIRRLAAARKWRDAILLFDQLEDLGLERNTETMNVLLDALCKEKKVELAREVFVMLSPH 217
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D T NI ++GWC + + EA +++ P +TY + A K+
Sbjct: 218 IAPDAYTFNIFVHGWCSVRRIDEALWTIEEMKTRGFPPIVITYTAVLEAYCKQRNFRRVY 277
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ +M +G P+V+T I+ +L +R EAL V MK+ GC P+ YN+LI L
Sbjct: 278 EVLDSMGSQGCHPNVITYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLL 337
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
+ + + +NG L N T+N ++ L + ++ VL+ ME CK
Sbjct: 338 GRAGHLFEANQVFRVEMPRNG-VLRNVATYNTMISILCQYGRDDDALGVLKEMEAQSCKP 396
Query: 430 STDTYNVILKLYVNWDCEDKVRHTW--EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
TY +L+L + + H E ++ G+G D +YT++IHGL G + A
Sbjct: 397 DLQTYQPLLRLLLGRRGQAAAVHRLLSELRDRNGLGLDLDTYTLLIHGLCKVGETDWAYL 456
Query: 488 YFHEMRLKGMVPEPRTG-ILVNDMN 511
+ EM +VP PRT +L+++M
Sbjct: 457 LYDEMVGSEIVPRPRTCELLLSEMQ 481
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 9/297 (3%)
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD----IKTMNIILN 265
VF R E G D+ ++ L+ LC K + A + GY+ + + N +++
Sbjct: 149 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVID 208
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ G V +A + +++ PD VTY + ++ L K + A+ + Q M++KG P
Sbjct: 209 GFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMP 268
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D T N +I C ++ EA+ +L++M G P+V TY+ LI++ CKI R
Sbjct: 269 DTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVF 328
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYV 442
D M +K PN ++ LL +V +L+ M R+G +N+++ Y
Sbjct: 329 DSMVRKGQK--PNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYA 386
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
DK + EM + G+ PD SY+ +IH L GR+EDA+ +F++M +G+ P
Sbjct: 387 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSP 443
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 181/376 (48%), Gaps = 18/376 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAIL------DVLGRARRFVELIQVFDEMPDLVNEKTYG 192
A + F + R+G P S +++ +L L R ++L+ + D +P + +
Sbjct: 324 ARSVFDSMVRKGQ-KPNSTIYHILLHGYATKGALIDVRDLLDLM-IRDGIP--FEHRAFN 379
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
IL+ YA V++A+ F ++ G D+ ++ ++ LC+ VE A F +E
Sbjct: 380 ILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSE 439
Query: 253 -FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+I + +++G C +G + + ++I PD++ T ++ L K+G++ A
Sbjct: 440 GLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEA 499
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
F + G KPDVV+ N +ID CF ++ E+++ L M + G P+ TYNSL+
Sbjct: 500 QDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNG 559
Query: 372 LCKIKRMETVYEYLDEMEQKNGS-CLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGC 427
K R+E EM +K+ C IT N +L L + + E +M G
Sbjct: 560 YFKNGRVEDALALYREMFRKDVKFC---AITSNIMLHGLFQAGRIVAARELYMKMVDRGT 616
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
++ +TYN +L C D+ +E++ K D R+++++I+ L GR+++A S
Sbjct: 617 QLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKS 676
Query: 488 YFHEMRLKGMVPEPRT 503
F M L+G VP+ T
Sbjct: 677 LFSAMVLRGPVPDVIT 692
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 153/365 (41%), Gaps = 59/365 (16%)
Query: 193 ILLNRYAAAHMV-EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY------KH-----VE 240
I+LNR+ + + E+A+ +FD + AF ++L + R +H V
Sbjct: 18 IILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVS 77
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ T S N + I++ +C +G + A + +K+ +VT +
Sbjct: 78 LFNTMVRSGVNMMA---AIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134
Query: 301 ALTKKGKLGTALRL-FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL--------- 350
L + A+ + F+ M E G PDV + N +I LC +K+ EALE+L
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194
Query: 351 -----------------------------REMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
EM +G P+V TYNSLI LCK + M+
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVIL 438
L M K +P+ T+N +++ SL + EE +L++M +G + TY++++
Sbjct: 255 VAILQHMFDKG--VMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLI 312
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ Y + R ++ M +KG P+ Y +++HG KG L D M G+
Sbjct: 313 QYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIP 372
Query: 499 PEPRT 503
E R
Sbjct: 373 FEHRA 377
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 4/278 (1%)
Query: 233 LCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LC+ V A+ FF+ + D+ + N +++G+C +G + E+ + ++ PD
Sbjct: 490 LCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPD 549
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
S TY + +N K G++ AL L++ M+ K K +T N ++ L RI A E+
Sbjct: 550 SWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYM 609
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG--SCLPNEITFNYLLKSL 409
+M +RG + TYN+++ LC+ ++ +++ K I N LLK +
Sbjct: 610 KMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLK-V 668
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+ +E + M G TY++++K ++ ++ + + MEK G D
Sbjct: 669 GRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHML 728
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
+++ L +KG + A +Y ++ K E T L+
Sbjct: 729 NIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALL 766
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 9/262 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A FF V G P +N ++D + E I+ D M + + TY LL
Sbjct: 499 AQDFFDMVIHIG-VKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLL 557
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH---VEVAETFFESEKNE 252
N Y VE+A+ ++ R+ F + A + ++ ++ V E + +
Sbjct: 558 NGYFKNGRVEDALALY--REMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRG 615
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
I+T N +L G C V EA R ++D+ + E D T++ +NAL K G++ A
Sbjct: 616 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAK 675
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
LF AM +G PDV+T + +I + + + E+ + M+ GC + N +++ L
Sbjct: 676 SLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRL 735
Query: 373 CKIKRMETVYEYLDEMEQKNGS 394
+ + YL ++++KN S
Sbjct: 736 LEKGDVRRAGTYLTKIDEKNFS 757
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 176/397 (44%), Gaps = 58/397 (14%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P F +++ L R R VE + + D M + N+ TYG +++ A+ +
Sbjct: 79 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 138
Query: 211 FDRRKEFGEL-DDLSAFQNLL--LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
+ +E + D+ + ++ LW +H + F E + DI T + ++NG+
Sbjct: 139 LRKMEELSHIKPDVVIYSAIIDGLWK-DGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGF 197
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G EA+R ++++ K PD VT++ +NAL K+G L +A L Q M G P+V
Sbjct: 198 CSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNV 257
Query: 328 VTCNCIIDALCFKKRIPEALEVLR------------------------------------ 351
VTCN ++D LC ++ +ALE+ +
Sbjct: 258 VTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEG 317
Query: 352 ----------EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
EM +RG +P+ TY+S+I LCK R++ + D M K+ S PN +T
Sbjct: 318 KFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS--PNIVT 375
Query: 402 FNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
FN L+ K V LE M R G + TY +++ + + ++EM
Sbjct: 376 FNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMI 435
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
G+ PD + M+ GL+ K L+ AL+ E+++
Sbjct: 436 SSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMS 472
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 144/333 (43%), Gaps = 57/333 (17%)
Query: 222 DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D+ +F L+ C + A TF + K F + T N +L+G CV V EA
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL--- 70
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
D+ C+P+ VT+ T +N L ++G++ A+ L M E G +P+ +T I+D +C
Sbjct: 71 -DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 341 KRIPEALEVLR------------------------------------EMKNRGCLPNVTT 364
AL +LR EM+++G P++ T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLER 421
Y+ +I C + L EM + S P+ +TF+ L+ +L K ++ +L+
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKIS--PDVVTFSGLINALVKEGDLNSAQDLLQE 247
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK-----------GMGPDQRSYT 470
M +G + T N +L + ++ M+K G+ PD ++Y
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++I GL ++G+ +A + EM +G+VP+ T
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVT 340
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 104/252 (41%), Gaps = 15/252 (5%)
Query: 153 SPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIG 209
SP F+ +++ L G +L+Q N T LL+ + +++A+
Sbjct: 219 SPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALE 278
Query: 210 VFDR-RKEFGELDDLSAFQ---------NLLL--WLCRYKHVEVAETFFESEKNEFGYDI 257
+F +K ++D AF N+L+ + K +E E + E D
Sbjct: 279 MFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 338
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T + ++NG C + EA + + + P+ VT+ T + K G + L LF
Sbjct: 339 VTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCE 398
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M +G + +T +I I +L++ +EM + G P+ T +++ L +
Sbjct: 399 MGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEE 458
Query: 378 METVYEYLDEME 389
++ L+E++
Sbjct: 459 LKKALAMLEELQ 470
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 199/434 (45%), Gaps = 56/434 (12%)
Query: 119 TLTDDLIVNVINRYRF---DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVEL 175
D + NV+ RF D EAA + +G PG +N++L L R+ + +
Sbjct: 126 VFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG-LKPGIVTYNSVLKGLCRSGMWDKA 184
Query: 176 IQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
+VF EM D + +++ IL+ + +EEA+ ++ + G DL +F L+
Sbjct: 185 WEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGL 244
Query: 233 LCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
R ++ A + E FG D +++ G+C G + +A R +++ C P
Sbjct: 245 FARRGKMDHAMAYLR-EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP 303
Query: 291 DSVTYATFVNALTKK-----------------------------------GKLGTALRLF 315
D VTY T +N L K+ GKL AL+LF
Sbjct: 304 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 363
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M + +PD+VT N +ID +C + + +A ++ +M +R PN TY+ LI C+
Sbjct: 364 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 423
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTD 432
++E + +LDEM K LPN +T+N ++K + V L++M N
Sbjct: 424 GQVEDAFGFLDEMINK--GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 481
Query: 433 TYNVILKLYVNWDCEDKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TYN ++ Y+ EDK+ ++ MEK+ + PD +Y ++I+G G +++A F
Sbjct: 482 TYNTLIHGYIK---EDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIF 538
Query: 490 HEMRLKGMVPEPRT 503
+M KG+ P+ T
Sbjct: 539 EKMCAKGIEPDRYT 552
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 167/343 (48%), Gaps = 17/343 (4%)
Query: 168 RARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
+A F ++ V EM PD+V T+ ++++ A E A+ + D G
Sbjct: 107 KALEFDKVDAVISEMEKRCVFPDVV---THNVMVDARFRAGDAEAAMALVDSMVSKGLKP 163
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRF 279
+ + ++L LCR + A F+ E ++FG D+++ I++ G+C +G + EA +
Sbjct: 164 GIVTYNSVLKGLCRSGMWDKAWEVFK-EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKI 222
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
+K++ +PD V+++ + ++GK+ A+ + M G PD V +I C
Sbjct: 223 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCR 282
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ +AL V EM GCLP+V TYN+L+ LCK +R+ L+EM ++ P+
Sbjct: 283 AGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER--GVPPDL 340
Query: 400 ITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
TF L+ K ++ + + M + TYN ++ DK W++
Sbjct: 341 CTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD 400
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
M + + P+ +Y+++I +KG++EDA + EM KG++P
Sbjct: 401 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 443
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 182/371 (49%), Gaps = 18/371 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGR------ARRFVELIQVFDEMPDLVNEKT 190
E A +K + G P F+ ++ + R A ++ ++ F +PD V
Sbjct: 217 EEALKIYKEMRHRG-IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV---I 272
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y +++ + A ++ +A+ V D G L D+ + LL LC+ + + AE +E
Sbjct: 273 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL-NEM 331
Query: 251 NEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
E G D+ T +++G+C+ G + +A + + ++ + PD VTY T ++ + ++G L
Sbjct: 332 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 391
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A L+ M + P+ VT + +ID+ C K ++ +A L EM N+G LPN+ TYNS+
Sbjct: 392 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 451
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERN 425
IK C+ + ++L +M S P+ IT+N L+ K +++ +L ME+
Sbjct: 452 IKGYCRSGNVSKGQKFLQKMMVNKVS--PDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE 509
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
+ TYN+++ + + +E+M KG+ PD+ +Y MI+G G ++A
Sbjct: 510 KVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEA 569
Query: 486 LSYFHEMRLKG 496
EM +G
Sbjct: 570 FQLHDEMLQRG 580
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 5/228 (2%)
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A ++ + S E ++ T V+ K + + M ++ PDVVT N ++D
Sbjct: 79 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 138
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
A A+ ++ M ++G P + TYNS++K LC+ + +E EM+ +
Sbjct: 139 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD--DFGV 196
Query: 396 LPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+ +F L+ + + EE + + M G K +++ ++ L+ D
Sbjct: 197 APDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMA 256
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
EM G+ PD YT++I G G + DAL EM G +P+
Sbjct: 257 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD 304
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 39/210 (18%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++D + R + ++D+M N TY IL++ + VE+A G
Sbjct: 373 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGF 432
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES---------------------- 248
D G L ++ + +++ CR +V + F +
Sbjct: 433 LDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 492
Query: 249 --------------EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
EK + D+ T N+++NG+ V GNV EA ++ + EPD T
Sbjct: 493 EDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYT 552
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRK 324
Y + +N G A +L M ++G++
Sbjct: 553 YMSMINGHVTAGNSKEAFQLHDEMLQRGKE 582
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 188/394 (47%), Gaps = 23/394 (5%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR------ARRFVELIQVFDEMPDLVNE 188
D A FFKW ++G +S + +L++LGR AR F+ I+ + + +
Sbjct: 90 DPSKALRFFKWTQQKG-FSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLED 148
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
+ + L+ YA A + +E++ +F K + F +L+ L + +A+ ++
Sbjct: 149 RFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDE 208
Query: 249 EKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+G D T N+++ G+C V E RF++++ C+ D VTY T V+ L + G
Sbjct: 209 MLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAG 268
Query: 307 KLGTALRLFQAMWEK--GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
K+ A L M +K G P+VVT +I C K+ + EAL VL EM +RG PN+ T
Sbjct: 269 KVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMIT 328
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLER 421
YN+L+K LC+ +++ + + L+ M + +G P+ TFN ++ +E V E
Sbjct: 329 YNTLVKGLCEAHKLDKMKDVLERM-KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFES 387
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK-------GMGPDQRSYTVMIH 474
M++ + +Y+ +++ D ++E+ +K G P SY +
Sbjct: 388 MKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFE 447
Query: 475 GLYDKGRLEDALSYFHEMRLKGMV-PEPRTGILV 507
L + G+ + A ++ +G P+ T +++
Sbjct: 448 SLCEHGKTKKAERVIRQLMKRGTQDPQSYTTVIM 481
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 103/234 (44%), Gaps = 19/234 (8%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM-------PDLVNEKTYGILLNRYAAAHMVEE 206
P +N ++ L A + ++ V + M PD T+ +++ + A ++E
Sbjct: 324 PNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTF---TFNTIIHLHCCAGNLDE 380
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EK----NEFGYD--IK 258
A+ VF+ K+F D +++ L+ LC+ ++AE F+ EK ++FG
Sbjct: 381 ALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAA 440
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
+ N I C G +A+R + ++K + D +Y T + K+G + L M
Sbjct: 441 SYNPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKEGAYESGYELLMWM 499
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ PD+ + +ID K + A E L +M P +T++S++ L
Sbjct: 500 LRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKL 553
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 191/460 (41%), Gaps = 80/460 (17%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
T+T ++ V+ + D + A+TFF+W + + + +L+ +A+R E ++
Sbjct: 40 TVTPEVAGRVLQQVE-DPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRL 98
Query: 179 F-DEMPDLV--NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+E+ L NE Y ++N + A V++A + D KE G D+ L+ LCR
Sbjct: 99 LKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCR 158
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK-----SKCEP 290
++ A F+S E ++ T N ++NG C + EA + D+ K CEP
Sbjct: 159 KGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEP 218
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D ++Y+T ++AL K ++ A F+ M G P+VVT + +ID LC R E LE+L
Sbjct: 219 DVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELL 278
Query: 351 REMKNRG------------------------CL-----------PNVTTYNSLIKHLCKI 375
MK +G C PNV TYN + LCK
Sbjct: 279 LHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKA 338
Query: 376 KRMETVYEYLDEMEQ------------------KNG---------------SCLPNEITF 402
R++ Y L EM + K G C+P+ +TF
Sbjct: 339 GRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTF 398
Query: 403 NYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
LL KK E V E M G TYNV++ D + + +M++
Sbjct: 399 MTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKR 458
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
K PD +Y +I L R+++A + M +VP
Sbjct: 459 KKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVP 498
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 187/384 (48%), Gaps = 29/384 (7%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI-LLNR 197
AY +FK + G +P +++++D L + R E +++ M EK +GI +++
Sbjct: 239 AYEYFKRMRAVG-CAPNVVTYSSLIDGLCKVDRPSECLELLLHM----KEKGFGINIIDF 293
Query: 198 YAAAHMV------EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEK 250
A H + E+A F+R + G+ ++ + + LC+ V+ A E +
Sbjct: 294 NAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVE 353
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
++ D+ T + I++G+C G + +A + ++ +C P VT+ T ++ ++ K
Sbjct: 354 SKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSRE 413
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A R+ + M G P + T N ++D +C + ALE+ +MK + P+ TY LI+
Sbjct: 414 AFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQ 473
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGC 427
LC+ +R++ E+LD ME N +PN + L++ L K EV VL+ + GC
Sbjct: 474 CLCRARRVDEAKEFLDVMEADN--VVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGC 531
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK----KGMGPDQRSYTVMIHGLYDKGRLE 483
+ +T+ ++++ E +R WE K G D +Y++ + + G+ +
Sbjct: 532 QPLGETFKILVE-------ELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPD 584
Query: 484 DALSYFHEMRLKGMVPEPRTGILV 507
+A+ +M LKG+ P+ T + V
Sbjct: 585 EAVEVIEQMVLKGVRPDEGTYVAV 608
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 152/388 (39%), Gaps = 48/388 (12%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
+ E A FF+ + + G P +N + L +A R E ++ EM PD++
Sbjct: 305 EQEKACQFFERLLKSGK-KPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVI-- 361
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY +++ + A +++A VF R + F LL +K A E
Sbjct: 362 -TYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHED 420
Query: 249 EKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
N F ++T N++++ C +V A + + + K +PD TYA + L + +
Sbjct: 421 MVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARR 480
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP------- 360
+ A M P+ C+ +++ LC + + EA VL + GC P
Sbjct: 481 VDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKI 540
Query: 361 -------------------------NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
+ TY+ + +CK + + E +++M K
Sbjct: 541 LVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVR- 599
Query: 396 LPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+E T+ +L+SL + V + E+M GC TY +++ + D D+
Sbjct: 600 -PDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFR 658
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
+E M G P ++ + L D G
Sbjct: 659 IFEAMVAAGFTPQAQTMRTLSSCLRDAG 686
>gi|222625312|gb|EEE59444.1| hypothetical protein OsJ_11623 [Oryza sativa Japonica Group]
Length = 589
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 3/276 (1%)
Query: 238 HVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
HV VAE E + ++ +L GWC +G + EAK + ++ PD V + T
Sbjct: 164 HVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNT 223
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+ G+ A L + M +G P+ V+ ++ L + R+ EA+ V EM+ +G
Sbjct: 224 LLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKG 283
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP--EEV 415
C P+ TY +L+ CK R+ YE+LD M + G + + + + KK EE
Sbjct: 284 CAPDSVTYGTLVTAFCKAGRISQGYEFLDVM-AREGLRVDAGVYLGFFVAHEKKEQLEEC 342
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
++ERM C YNV+++L + W EME + P ++ +M+ G
Sbjct: 343 LELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTG 402
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
L +G L +A YF +M +G+ P+ G+L + +N
Sbjct: 403 LVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLN 438
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 170/363 (46%), Gaps = 16/363 (4%)
Query: 148 REGDYSPGSNVFNAILD---VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYA----A 200
+ G + P S N +L + GR R + +Q + V TY ++L +
Sbjct: 94 QAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKS 153
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM 260
A+ +E+A+ F K G DL ++ LL L + A F + DI T
Sbjct: 154 ANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS--PDIMTY 211
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N++++G+C +G YEA+ K+I+K+ EP+ TY+ +N K K+ A +F M E
Sbjct: 212 NVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
P+ VT N +I C + +A+++ EM+ GC + TYN+LI LC K+
Sbjct: 272 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLC--KKRGG 329
Query: 381 VYEYLDEMEQKNGSCL-PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNV 436
VY +D + G+ L P +T+N L++ ++ E + ME C + TY++
Sbjct: 330 VYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSI 388
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ + T E+M+ G P +Y +I+G G L+ AL +F +M+L G
Sbjct: 389 LIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAG 448
Query: 497 MVP 499
P
Sbjct: 449 CAP 451
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 187/423 (44%), Gaps = 61/423 (14%)
Query: 160 NAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRKE 216
NA+L L AR+ + +++F E+ + N TY +L+ + + +A+ VF K
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVY- 274
G L + S LLL LC + A F E + F + NI+L G+ + G V
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 275 --------------------------------------EAKRFWKDIIKSKCEPDSVTYA 296
+A F+K++ S EPD +Y
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
++AL+ G++ A LF AM PD++T N ++D C + EA +++E+
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---E 413
G PNV TY+ +I CK+ ++E +E +M + N C+PN +TFN L+ K E
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESN--CVPNAVTFNTLIAGFCKAGMLE 295
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK-----VRHTWEEMEKKGMGPDQRS 468
+ + ME+ GCK + TYN + ++ C+ + + ++E G+ P +
Sbjct: 296 DAIKLFAEMEKIGCKATIVTYNTL----IDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVT 351
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLT 528
Y +I G D RL +A+ YF EM K P T ++ D K++ E K + +
Sbjct: 352 YNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMK 410
Query: 529 SLG 531
+ G
Sbjct: 411 AHG 413
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 175/371 (47%), Gaps = 15/371 (4%)
Query: 130 NRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLV 186
N+ E A FFK + G P ++ +L L + R E +F M PD++
Sbjct: 151 NKSANRLEQAMEFFKEMKASG-VEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIM 209
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
TY +L++ Y EA + + G ++ + ++ C+ VE A E F
Sbjct: 210 ---TYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVF 266
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ ++ + T N ++ G+C G + +A + + ++ K C+ VTY T +++L KK
Sbjct: 267 MKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKK 326
Query: 306 -GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
G + TA+ LF + G P +VT N +I C +R+ EA++ EM+ + C PNV T
Sbjct: 327 RGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVIT 385
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ER 421
Y+ LI LCK++RM+ + L++M+ + P +T+ L+ K E+ L E+
Sbjct: 386 YSILIDGLCKVRRMKEAAKTLEDMKAHGYT--PTVVTYGGLINGFCKCGELKSALLFFEK 443
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M+ GC +T +N ++ + + M +G PD +Y +I GL R
Sbjct: 444 MKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANR 503
Query: 482 LEDALSYFHEM 492
+EDA F M
Sbjct: 504 VEDAQRLFDGM 514
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 145/309 (46%), Gaps = 14/309 (4%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
T +I+N + EA F K + E + P + FN ++ +A + I++
Sbjct: 243 VFTYSIIINCYCKLDKVEEAWEVFMKMI--ESNCVPNAVTFNTLIAGFCKAGMLEDAIKL 300
Query: 179 FDEMPDLVNEKT---YGILLNRYAAAHM-VEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
F EM + + T Y L++ V A+ +F++ + G + + +L+ C
Sbjct: 301 FAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFC 360
Query: 235 RYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ + A +F+ + + ++ T +I+++G C + + EA + +D+ P VT
Sbjct: 361 DARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVT 420
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y +N K G+L +AL F+ M G P+ V N +ID LC +R + L +L M
Sbjct: 421 YGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMH 480
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KK 411
GC P+V TYN LI LC R+E D M +C PN TFN+L++ L KK
Sbjct: 481 AEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM-----ACAPNVTTFNFLIRGLCAQKK 535
Query: 412 PEEVPWVLE 420
EE +L+
Sbjct: 536 VEEARNILD 544
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 140/306 (45%), Gaps = 9/306 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A + K + + G Y P ++ I++ + + E +VF +M + + N T+ L+
Sbjct: 227 AQSLMKEILKAG-YEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLI 285
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH--VEVAETFFESEKNEF 253
+ A M+E+AI +F ++ G + + L+ LC+ + + F + E
Sbjct: 286 AGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGL 345
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
I T N ++ G+C + EA +++ D ++ KC P+ +TY+ ++ L K ++ A +
Sbjct: 346 TPTIVTYNSLIQGFCDARRLSEAMQYF-DEMEGKCAPNVITYSILIDGLCKVRRMKEAAK 404
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+ M G P VVT +I+ C + AL +MK GC PN +N+LI LC
Sbjct: 405 TLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLC 464
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDT 433
K +R L M + C P+ IT+N L+ L V + C + T
Sbjct: 465 KAERANDGLRLLCHMHAEG--CKPDVITYNCLISGLCSANRVEDAQRLFDGMACAPNVTT 522
Query: 434 YNVILK 439
+N +++
Sbjct: 523 FNFLIR 528
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 159/305 (52%), Gaps = 6/305 (1%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y +++ A + EA+ F+R +++G D AF ++ L + + A++FF+S K
Sbjct: 149 YMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLK 208
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ F D+ +++GWC GN+ EA+R + ++ + +P+ TY+ ++AL + G++
Sbjct: 209 DRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITR 268
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A +F M + G P+ +T N ++ R + L+V +MK GC P+ TYN LI+
Sbjct: 269 AHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIE 328
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGC 427
C+ +E + L+ +++ C N +FN + + K +V + +M+ C
Sbjct: 329 SHCRDDNLEEAVKILNSVKK---GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKC 385
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ +T TYN++++++ + D V +EM++ + P+ +Y V+I G +A S
Sbjct: 386 RPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYS 445
Query: 488 YFHEM 492
+F EM
Sbjct: 446 FFKEM 450
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 4/239 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P ++ ++D L R+ + VF EM D+ N T+ L+ + A E+ + V
Sbjct: 248 PNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQV 307
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
+++ K G D + L+ CR ++E A S K + + N I L
Sbjct: 308 YNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCISKL 367
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G+V A R + + KC P++VTY + K L+L + M E +P+ T
Sbjct: 368 GDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTY 427
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCL-PNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+I C A +EM CL P++ Y +++ L K +++ E +++M
Sbjct: 428 RVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKM 486
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 35/242 (14%)
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
EFG+ + +++ G EA + + C+PD + ++ +++L+KK + A
Sbjct: 141 EFGHSPEPYMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEA 200
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
F ++ ++ +PDVV ++ C I EA V EMK G PNV TY+ +I
Sbjct: 201 QSFFDSLKDRF-EPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDA 259
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMST 431
LC+ ++ ++ EM + C PN ITF
Sbjct: 260 LCRSGQITRAHDVFSEM--IDVGCDPNAITF----------------------------- 288
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
N +++++V +KV + +M++ G PD +Y +I LE+A+ +
Sbjct: 289 ---NNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS 345
Query: 492 MR 493
++
Sbjct: 346 VK 347
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 170/380 (44%), Gaps = 46/380 (12%)
Query: 154 PGSNV--FNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAI 208
P NV +N +L VL A R + Q+FDEM PD+V TYGIL++ Y A +E A+
Sbjct: 258 PDKNVCSYNILLKVLCGAGRVEDARQLFDEMASPPDVV---TYGILIHGYCALGELENAV 314
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGW 267
+ D G + + + +++ LC V A T E ++ D +L+G+
Sbjct: 315 KLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGF 374
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G++ A+R++ ++ + D VTY T +N L + G+L A ++ Q M + D
Sbjct: 375 CNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDE 434
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT ++D C + ++ EA +V M RG PNV TY +L LCK ++ E L E
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHE 494
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
M K +E N C TYN ++
Sbjct: 495 MSNKG-----------------------------LELNAC-----TYNSLINGLCKAGYL 520
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GIL 506
D+ T +M+ G+ PD +YT +I L G L+ A EM G+ P T +L
Sbjct: 521 DQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVL 580
Query: 507 VNDMNIKLKERGEQGKKVIK 526
+N + R E GKK+++
Sbjct: 581 MN--GFCMSGRVEGGKKLLE 598
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 177/408 (43%), Gaps = 47/408 (11%)
Query: 106 KGEIEKALNQCE------LTLTDDLIVNVINRY--RFDWEAAYTFFKWVSREGDYSPGSN 157
KG + AL E + L + + V++ + + D +A +F + R+G + G
Sbjct: 342 KGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGV- 400
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
+ +++ L RA E +V EM V+E TY +L++ Y + EA V +
Sbjct: 401 TYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTM 460
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
+ G ++ + L LC+ V+ A E E + T N ++NG C G +
Sbjct: 461 VQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYL 520
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+A R D+ + +PD TY T ++AL K G+L A L Q M + G KP +VT N +
Sbjct: 521 DQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVL 580
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
++ C R+ ++L M + PN TTYNSL+K C M++ E M +N
Sbjct: 581 MNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNV 640
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
PNE +TYN+++K + + ++
Sbjct: 641 E--PNE--------------------------------NTYNILIKGHCKARSMKEAQYF 666
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
EM +KG SY+ +I L K + +A FH+MR +G EP
Sbjct: 667 HNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEP 714
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
++ + NI+L C G V +A++ + ++ PD VTY ++ G+L A++L
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLL 317
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M +G +P+ ++ LC K R+ +AL V+ +M + + + Y +++ C
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYN 435
+ + + DEM++K + + +T+ L+ L + E L+ E+
Sbjct: 378 GDLVSARRWFDEMQRKGLAT--DGVTYTTLINGLCRAGE----LKEAEK----------- 420
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+EM + + D+ +YTV++ G +G++ +A + M +
Sbjct: 421 -----------------VLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQR 463
Query: 496 GMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
G+ P T ++D K + + + ++++ GL+ NA
Sbjct: 464 GVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNA 504
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 110/254 (43%), Gaps = 4/254 (1%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
+P + A+ D L + ++ EM + +N TY L+N A +++A+
Sbjct: 466 APNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMR 525
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWC 268
G D+ + L+ LC+ ++ A E N I T N+++NG+C
Sbjct: 526 TMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFC 585
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+ G V K+ + +++ P++ TY + + + + +++ M + +P+
Sbjct: 586 MSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNEN 645
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N +I C + + EA EM +G ++Y++LI+ L K K+ + +M
Sbjct: 646 TYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDM 705
Query: 389 EQKNGSCLPNEITF 402
++ + P+ F
Sbjct: 706 RKEGFTAEPDVYNF 719
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 101/262 (38%), Gaps = 13/262 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D +AA +S +G + +N++++ L +A + ++ +M PD+
Sbjct: 484 DVQAANELLHEMSNKG-LELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVY-- 540
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE- 247
TY L++ + ++ A + + G + + L+ C VE + E
Sbjct: 541 -TYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEW 599
Query: 248 -SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
EKN + T N ++ +C+ N+ +K + EP+ TY + K
Sbjct: 600 MLEKN-IHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKAR 658
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ A M EKG + + + +I L KK+ EA ++ +M+ G YN
Sbjct: 659 SMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYN 718
Query: 367 SLIKHLCKIKRMETVYEYLDEM 388
I +E DE+
Sbjct: 719 FYIDFNFNEDNLEATLALCDEL 740
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 196/423 (46%), Gaps = 56/423 (13%)
Query: 127 NVINRYRF---DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP 183
NV+ RF D EAA + +G PG +N++L L R+ + + +VF EM
Sbjct: 195 NVMVDARFRAGDAEAAMALVDSMVSKG-LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 253
Query: 184 DL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
D + +++ IL+ + +EEA+ ++ + G DL +F L+ R ++
Sbjct: 254 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 313
Query: 241 VAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
A + E FG D +++ G+C G + +A R +++ C PD VTY T
Sbjct: 314 HAMAYLR-EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 372
Query: 299 VNALTK-----------------------------------KGKLGTALRLFQAMWEKGR 323
+N L K +GKL AL+LF M +
Sbjct: 373 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 432
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+PD+VT N +ID +C + + +A ++ +M +R PN TY+ LI C+ ++E +
Sbjct: 433 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 492
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKL 440
+LDEM K LPN +T+N ++K + V L++M N TYN ++
Sbjct: 493 FLDEMINK--GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 550
Query: 441 YVNWDCEDKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
Y+ EDK+ ++ MEK+ + PD +Y ++I+G G +++A F +M KG+
Sbjct: 551 YIK---EDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 607
Query: 498 VPE 500
P+
Sbjct: 608 EPD 610
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 184/375 (49%), Gaps = 18/375 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGR------ARRFVELIQVFDEMPDLVNEKT 190
E A +K + G P F+ ++ + R A ++ ++ F +PD V
Sbjct: 278 EEALKIYKEMRHRG-IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV---I 333
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y +++ + A ++ +A+ V D G L D+ + LL LC+ + + AE +E
Sbjct: 334 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL-NEM 392
Query: 251 NEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
E G D+ T +++G+C+ G + +A + + ++ + PD VTY T ++ + ++G L
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 452
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A L+ M + P+ VT + +ID+ C K ++ +A L EM N+G LPN+ TYNS+
Sbjct: 453 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 512
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERN 425
IK C+ + ++L +M S P+ IT+N L+ K +++ +L ME+
Sbjct: 513 IKGYCRSGNVSKGQKFLQKMMVNKVS--PDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE 570
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
+ TYN+++ + + +E+M KG+ PD+ +Y MI+G G ++A
Sbjct: 571 KVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEA 630
Query: 486 LSYFHEMRLKGMVPE 500
EM +G P+
Sbjct: 631 FQLHDEMLQRGFAPD 645
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 167/343 (48%), Gaps = 17/343 (4%)
Query: 168 RARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
+A F ++ V EM PD+V T+ ++++ A E A+ + D G
Sbjct: 168 KALEFDKVDAVISEMEKRCVFPDVV---THNVMVDARFRAGDAEAAMALVDSMVSKGLKP 224
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRF 279
+ + ++L LCR + A F+ E ++FG D+++ I++ G+C +G + EA +
Sbjct: 225 GIVTYNSVLKGLCRSGMWDKAWEVFK-EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKI 283
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
+K++ +PD V+++ + ++GK+ A+ + M G PD V +I C
Sbjct: 284 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCR 343
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ +AL V EM GCLP+V TYN+L+ LCK +R+ L+EM ++ P+
Sbjct: 344 AGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER--GVPPDL 401
Query: 400 ITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
TF L+ K ++ + + M + TYN ++ DK W++
Sbjct: 402 CTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD 461
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
M + + P+ +Y+++I +KG++EDA + EM KG++P
Sbjct: 462 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 504
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 138/318 (43%), Gaps = 6/318 (1%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
VN T I+++ Y A ++ V ++ D+ ++ R E A
Sbjct: 154 VNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 213
Query: 246 FESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
+S ++ I T N +L G C G +A +K++ PD ++ + +
Sbjct: 214 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 273
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
G++ AL++++ M +G KPD+V+ +C+I + ++ A+ LREM+ G +P+
Sbjct: 274 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 333
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLER 421
Y +I C+ M DEM CLP+ +T+N LL L K + +L
Sbjct: 334 YTMVIGGFCRAGLMSDALRVRDEM--VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 391
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M G T+ ++ Y DK ++ M + + PD +Y +I G+ +G
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451
Query: 482 LEDALSYFHEMRLKGMVP 499
L+ A + +M + + P
Sbjct: 452 LDKANDLWDDMHSREIFP 469
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 5/228 (2%)
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A ++ + S E ++ T V+ K + + M ++ PDVVT N ++D
Sbjct: 140 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 199
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
A A+ ++ M ++G P + TYNS++K LC+ + +E EM+ +
Sbjct: 200 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD--DFGV 257
Query: 396 LPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+ +F L+ + + EE + + M G K +++ ++ L+ D
Sbjct: 258 APDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMA 317
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
EM G+ PD YT++I G G + DAL EM G +P+
Sbjct: 318 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD 365
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 176/397 (44%), Gaps = 58/397 (14%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P F +++ L R R VE + + D M + N+ TYG +++ A+ +
Sbjct: 79 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 138
Query: 211 FDRRKEFGEL-DDLSAFQNLL--LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
+ +E + D+ + ++ LW +H + F E + DI T + ++NG+
Sbjct: 139 LRKMEELSHIKPDVVIYSAIIDGLWK-DGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGF 197
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G EA+R ++++ K PD VT++ +NAL K+G L +A L Q M G P+V
Sbjct: 198 CSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNV 257
Query: 328 VTCNCIIDALCFKKRIPEALEVLR------------------------------------ 351
VTCN ++D LC ++ +ALE+ +
Sbjct: 258 VTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEG 317
Query: 352 ----------EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
EM +RG +P+ TY+S+I LCK R++ + D M K+ S PN +T
Sbjct: 318 KFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS--PNIVT 375
Query: 402 FNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
FN L+ K V LE M R G + TY +++ + + ++EM
Sbjct: 376 FNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMI 435
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
G+ PD + M+ GL+ K L+ AL+ E+++
Sbjct: 436 SSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMS 472
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 144/333 (43%), Gaps = 57/333 (17%)
Query: 222 DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D+ +F L+ C + A TF + K F + T N +L+G CV V EA
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL--- 70
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
D+ C+P+ VT+ T +N L ++G++ A+ L M E G +P+ +T I+D +C
Sbjct: 71 -DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 341 KRIPEALEVLR------------------------------------EMKNRGCLPNVTT 364
AL +LR EM+++G P++ T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLER 421
Y+ +I C + L EM + S P+ +TF+ L+ +L K ++ +L+
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKIS--PDVVTFSGLINALVKEGDLNSAQDLLQE 247
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK-----------GMGPDQRSYT 470
M +G + T N +L + ++ M+K G+ PD ++Y
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++I GL ++G+ +A + EM +G+VP+ T
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVT 340
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 104/252 (41%), Gaps = 15/252 (5%)
Query: 153 SPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIG 209
SP F+ +++ L G +L+Q N T LL+ + +++A+
Sbjct: 219 SPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALE 278
Query: 210 VFDR-RKEFGELDDLSAFQ---------NLLL--WLCRYKHVEVAETFFESEKNEFGYDI 257
+F +K ++D AF N+L+ + K +E E + E D
Sbjct: 279 MFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 338
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T + ++NG C + EA + + + P+ VT+ T + K G + L LF
Sbjct: 339 VTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCE 398
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M +G + +T +I I +L++ +EM + G P+ T +++ L +
Sbjct: 399 MGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEE 458
Query: 378 METVYEYLDEME 389
++ L+E++
Sbjct: 459 LKRALAMLEELQ 470
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 169/369 (45%), Gaps = 19/369 (5%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRY 198
F + + R P + ++D L +A+ F VF +M D N TY L++ Y
Sbjct: 222 FLEMIDR--GIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGY 279
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDI 257
+ +E + + + G D + +LL +LC+ A FF+S + +
Sbjct: 280 LSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKV 339
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T I+++G+ G + E F ++++ PD + F +A K G + A+ +F
Sbjct: 340 STYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNK 399
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M + G P+VV +IDALC R+ +A +M N G PN+ +NSL+ LC + +
Sbjct: 400 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 459
Query: 378 ----METVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMS 430
E VYE LD+ G C PN + FN L+ +L + E +++ ME G +
Sbjct: 460 WERAEELVYEMLDQ-----GIC-PNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPD 513
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
+Y ++ Y D+ ++ M G+ P + +Y ++HG R++DA F
Sbjct: 514 AFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFR 573
Query: 491 EMRLKGMVP 499
EM KG+ P
Sbjct: 574 EMLRKGVTP 582
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 136/304 (44%), Gaps = 10/304 (3%)
Query: 204 VEEAIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY----DIK 258
V EA+ V R E G + D ++ LL LC K E A ++ G ++
Sbjct: 141 VGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVV 200
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
+ +I++NG+ G V + + ++I PD VTY T ++ L K A +FQ M
Sbjct: 201 SYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQM 260
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
+ G KP+ T NC+I + E +++L EM RG P+ TY SL+ +LCK R
Sbjct: 261 IDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRC 320
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYN 435
+ D M +K P T+ L+ E+ L+ M NG +N
Sbjct: 321 REARFFFDSMIRKGIK--PKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFN 378
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+ Y DK + +M + G+ P+ +Y +I L GR++DA F++M +
Sbjct: 379 IFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE 438
Query: 496 GMVP 499
G+ P
Sbjct: 439 GVTP 442
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 151/363 (41%), Gaps = 18/363 (4%)
Query: 154 PGS-NVFNAILDVLGRAR--RFVEL-IQVFDEMPDLVNEK------TYGILLNRYAAAHM 203
P S FN +L + RAR EL + F+ M ++K TY IL+ R+
Sbjct: 46 PASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGH 105
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMN 261
+E F + G D A LL LC K V A E G D +
Sbjct: 106 LEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYT 165
Query: 262 IILNGWCVLGNVYEA---KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
I+L G C EA D +C P+ V+Y+ +N +G++ LF M
Sbjct: 166 ILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEM 225
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
++G PDVVT +ID LC + A V ++M + G PN TYN LI I +
Sbjct: 226 IDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKW 285
Query: 379 ETVYEYLDEMEQKN--GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNV 436
+ V + L+EM + C NYL K+ + E + + M R G K TY +
Sbjct: 286 KEVVQMLEEMSARGLKPDCYTYGSLLNYLCKN-GRCREARFFFDSMIRKGIKPKVSTYGI 344
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ Y ++ + M + G+ PD + + G ++ A+ F++MR G
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 404
Query: 497 MVP 499
+ P
Sbjct: 405 LSP 407
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 152/325 (46%), Gaps = 17/325 (5%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK---HVEVAETFFESEKNE----FGYD 256
+++A+ +FD + AF +LL + R + E+A + F E +
Sbjct: 30 LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPN 89
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR-LF 315
+ T +I++ +C +G++ + I+K+ D + + L ++G A+ L
Sbjct: 90 LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN---RGCLPNVTTYNSLIKHL 372
Q M E G PD V+ ++ LC +KR EALE+L M + R C PNV +Y+ +I
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGF 209
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKM 429
+++ Y EM + P+ +T+ ++ L K + V ++M NG K
Sbjct: 210 FTEGQVDKPYNLFLEMIDR--GIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKP 267
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ TYN ++ Y++ +V EEM +G+ PD +Y +++ L GR +A +F
Sbjct: 268 NNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFF 327
Query: 490 HEMRLKGMVPEPRT-GILVNDMNIK 513
M KG+ P+ T GIL++ K
Sbjct: 328 DSMIRKGIKPKVSTYGILIHGYATK 352
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 138/291 (47%), Gaps = 18/291 (6%)
Query: 222 DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKR-F 279
+L + L+ CR H+E F K + D +N +L G C V EA
Sbjct: 89 NLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVL 148
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE-KGRK--PDVVTCNCIIDA 336
+ + + C PD+V+Y + L + + AL L M + GR+ P+VV+ + +I+
Sbjct: 149 LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVING 208
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK---RMETVYEYLDEMEQKNG 393
+ ++ + + EM +RG P+V TY ++I LCK + R E V++ + + K
Sbjct: 209 FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFK-- 266
Query: 394 SCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILK-LYVNWDCEDK 449
PN T+N L+ S+ K +EV +LE M G K TY +L L N C +
Sbjct: 267 ---PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCRE- 322
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
R ++ M +KG+ P +Y ++IHG KG L + S+ M G+ P+
Sbjct: 323 ARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPD 373
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 162/404 (40%), Gaps = 50/404 (12%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E SP ++FN + + + +F++M P++VN YG L++
Sbjct: 367 ENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVN---YGALIDALCKLG 423
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE---------------TFFE 247
V++A F++ G ++ F +L+ LC E AE FF
Sbjct: 424 RVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFN 483
Query: 248 S---------------------EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
+ E D + +++G+C+ G EA++ + ++
Sbjct: 484 TLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSI 543
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
P VTY T ++ ++ A LF+ M KG P VVT N I+ L KR EA
Sbjct: 544 GLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEA 603
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
E+ M N G ++ TYN ++ LCK ++ ++ + K N ITF ++
Sbjct: 604 KELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL--NIITFTIMI 661
Query: 407 KSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
+L K E+ + + NG + TY ++ + + ++ + MEK G
Sbjct: 662 GALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTA 721
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
P+ + ++ L +G + A +Y ++ + E T L+
Sbjct: 722 PNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLL 765
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 208/484 (42%), Gaps = 32/484 (6%)
Query: 68 QLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDD---- 123
+L+H+L E +R + V L T ++ +G ++A+ + L D
Sbjct: 221 KLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRG 280
Query: 124 LIVNVINRY--------RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVEL 175
L +VI F A + + + EG Y P +N+I+D +
Sbjct: 281 LTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEG-YEPDGFTYNSIIDGYCKLGMMQNA 339
Query: 176 IQVFDE------MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL 229
Q+ + +PD E TY L+N ++ AI VF+ E G +L L
Sbjct: 340 DQILRDGAFKGFVPD---ESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTL 396
Query: 230 LLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
+ L + + + + E +N DI T N+++NG C +G V +A D I
Sbjct: 397 VKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGH 456
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
PD T+ T ++ KK KL A+ + MW G PDV+T N I++ LC + + +
Sbjct: 457 LPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMG 516
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ M +GC+PN+ TYN L + CK +++E ++EM+ K + P+ + F L+K
Sbjct: 517 TFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLT--PDVVNFGTLMKG 574
Query: 409 LKKPEEVPWVLERMERNG----CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
++ + +R + TYN+++ + + + +M + G P
Sbjct: 575 FCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSP 634
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKK 523
D +Y VMI G G + S+ KG++P T G ++N + LK R +
Sbjct: 635 DSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLN--CLCLKRRVHEAVG 692
Query: 524 VIKL 527
+I L
Sbjct: 693 IIHL 696
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 154/354 (43%), Gaps = 47/354 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P FN ++ L R E ++ +++ P+L T I + + M+ EA
Sbjct: 214 PDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLF---TVNIFIQGFCQRAMLNEA 270
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
I + D G D+ + L+ LC+ V AE + NE GY D T N I++
Sbjct: 271 IRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNE-GYEPDGFTYNSIID 328
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C LG + A + +D PD TY + +N L + G + A+ +F EKG KP
Sbjct: 329 GYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKP 388
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
++V CN ++ L + I +AL+++ EM GC P++ TYN +I LCKI + +
Sbjct: 389 NLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLV 448
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ K LP+ TFN L+ D Y LKL
Sbjct: 449 IDAIAKGH--LPDVFTFNTLI-------------------------DGYCKKLKL----- 476
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D + M G+ PD +Y +++GL G+ ED + F M KG VP
Sbjct: 477 --DNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVP 528
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 172/401 (42%), Gaps = 14/401 (3%)
Query: 126 VNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE---- 181
V + +Y+ + A F V +E + + +++ LG F + +V E
Sbjct: 10 VAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMN 69
Query: 182 MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+ + + E Y + Y ++EA+ VF+R F + ++ ++ L Y++ +
Sbjct: 70 IDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQ 129
Query: 242 AETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A + +++ D+ T I + +C + A+R ++ CE +V Y T +
Sbjct: 130 AHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIG 189
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
++ A LF+ M G PD++ N +I LC K + E+ +L ++ RG P
Sbjct: 190 GFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSP 249
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPW 417
N+ T N I+ C+ + LD + + P+ IT+N L+ L K E
Sbjct: 250 NLFTVNIFIQGFCQRAMLNEAIRLLDGVGR---GLTPDVITYNTLICGLCKNFKVVEAEH 306
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
L +M G + TYN I+ Y + KG PD+ +Y +I+GL
Sbjct: 307 YLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLC 366
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG 518
G ++ A++ F+E KG+ P +L N + L ++G
Sbjct: 367 QDGDIDRAINVFNEAMEKGLKPNL---VLCNTLVKGLSQQG 404
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 5/216 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP +N+IL+ L +A ++ +++ F M + + N TY IL + A VEEA+
Sbjct: 492 SPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALN 551
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDIKTMNIILNGW 267
+ + + G D+ F L+ C ++ A F+ E+ +F + I T NI++N +
Sbjct: 552 LIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAF 611
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
N+ A++ + + ++ PDS TY ++ K G + + EKG P +
Sbjct: 612 AGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSL 671
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
T +++ LC K+R+ EA+ ++ M ++G +P V
Sbjct: 672 TTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV 707
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 120/282 (42%), Gaps = 16/282 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P FN ++D + + I++ D M PD++ TY +LN A E+
Sbjct: 458 PDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVI---TYNSILNGLCKAGKYEDV 514
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
+G F E G + ++ + L C+ + VE A E +N+ D+ ++ G
Sbjct: 515 MGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKG 574
Query: 267 WCVLGNVYEAKRFWKDIIKS-KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+C G++ A + +K + + K TY +NA K + A +LF M E G P
Sbjct: 575 FCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSP 634
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D T +ID C I L +G +P++TT+ ++ LC +R+ +
Sbjct: 635 DSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGII 694
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVP-WVLERMERNG 426
M K +P + N + ++ KK P V+E + + G
Sbjct: 695 HLMVHK--GIVPEVV--NTIFEADKKEVAAPKIVVENLMKKG 732
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 176/368 (47%), Gaps = 8/368 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
E A + + +EG P + +NA+++ L RF +++FD M L N +TY
Sbjct: 354 ELAIGMYHKMLKEG-LVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQ 412
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF-FESEKNE 252
++ +E+A+ VF++ + G + + L++ + ++ A F + +++
Sbjct: 413 IIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESN 472
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D +T +++G+C G + A F+ +++K P+ TY ++ K+GK+ AL
Sbjct: 473 CEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVAL 532
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
LF+ M E G + T N II L R EA + +M +G PN TY SLI L
Sbjct: 533 SLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGL 592
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD 432
CK ++ EME+KN CLPN T+ L+ L + +V ER+ NGC+ + D
Sbjct: 593 CKNTATNLAFKIFHEMEKKN--CLPNAHTYTSLIYGLCQEGKVDAA-ERLTENGCEPTID 649
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY+ ++ ++ E M++KG+ P Y ++ +++ AL F+ M
Sbjct: 650 TYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLM 709
Query: 493 RLKGMVPE 500
+KG P
Sbjct: 710 AVKGFQPH 717
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 180/421 (42%), Gaps = 33/421 (7%)
Query: 113 LNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAIL--------- 163
LN+ TL + +IN + + + A FF W+S+ Y F ++L
Sbjct: 62 LNRLASTLRPHHVSKIINTH-INTDTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKIL 120
Query: 164 -----------------DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
D L R F+ I D ++ LL + MV
Sbjct: 121 APADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTS 180
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILN 265
A V+ + G L F ++ LC+ V+ A F + + D T ++
Sbjct: 181 AQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLIL 240
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C + +A + ++K C P+SVTY+T +N L +G++G A+ + + M EKG +P
Sbjct: 241 GHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEP 300
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
V T I +LC R+ +A+ ++R M +GC P+V TY ++I L + +ME
Sbjct: 301 TVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMY 360
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYV 442
+M ++ +PN +T+N L+ L L + ME +G + TYN I+K
Sbjct: 361 HKMLKE--GLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLF 418
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
D +K + +M K G P +Y +I +G L +A + + M+ P+ R
Sbjct: 419 GMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDER 478
Query: 503 T 503
T
Sbjct: 479 T 479
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 174/429 (40%), Gaps = 52/429 (12%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
LT + ++N++ + EA F K + D P + + +++ R R+ + +VF
Sbjct: 198 LTFNTMINILCKKGKVQEAVLVFNKIF--QFDLCPDAFTYTSLILGHCRNRKLDKAFEVF 255
Query: 180 DEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
D M P N TY L+N + EA+ + + E G + + + L
Sbjct: 256 DRMVKDGCNP---NSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSL 312
Query: 234 CRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
C V+ A S K ++T I++G G + A + ++K P++
Sbjct: 313 CDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNT 372
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
VTY +N L +G+ G AL++F M G + T N II L I +A+ V +
Sbjct: 373 VTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNK 432
Query: 353 MKNRGCLPNVTTYNSLI-----------------------------------KHLCKIKR 377
M G P V TYN+LI CK +
Sbjct: 433 MLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGK 492
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTY 434
+++ + EM + S PN+ T+ ++ K ++ L ERME NGC S +TY
Sbjct: 493 LDSATSFFYEMLKCGIS--PNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETY 550
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N I+ + + +M ++G+ P+ +YT +I+GL A FHEM
Sbjct: 551 NAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEK 610
Query: 495 KGMVPEPRT 503
K +P T
Sbjct: 611 KNCLPNAHT 619
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 138/310 (44%), Gaps = 14/310 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
++A +FF + + G SP + A++D + + + +F+ M + + +TY
Sbjct: 494 DSATSFFYEMLKCG-ISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNA 552
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNE 252
+++ + + EA + E G + + +L+ LC+ +A + F E EK
Sbjct: 553 IISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKN 612
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ T ++ G C G V A+R + ++ CEP TY+T V+ L ++G+ A
Sbjct: 613 CLPNAHTYTSLIYGLCQEGKVDAAER----LTENGCEPTIDTYSTLVSGLCREGRSNEAS 668
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+L + M EKG P + ++ A C ++ ALE+ M +G P++ Y LI L
Sbjct: 669 QLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICAL 728
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKM 429
C + R E + +K + + I + L+ L + + ++ ME C
Sbjct: 729 CGVSRAEEALNIFQSLLKKQWN--SDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTP 786
Query: 430 STDTYNVILK 439
S TY ++ +
Sbjct: 787 SLHTYIILAR 796
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 109/279 (39%), Gaps = 42/279 (15%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
+ A + F+ + G S +NAI+ L + RF E + +M + N TY
Sbjct: 529 DVALSLFERMEENG-CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTS 587
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L+N A +F ++ L + + +L+ LC+ V+ AE E N
Sbjct: 588 LINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE---NGC 644
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
I T + +++G C G EA + +++ + P Y + + A K K+ AL
Sbjct: 645 EPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALE 704
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE--------------------- 352
+F M KG +P + +I ALC R EAL + +
Sbjct: 705 IFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLL 764
Query: 353 --------------MKNRGCLPNVTTYNSLIKHLCKIKR 377
M++R C P++ TY L + L K+ +
Sbjct: 765 QEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 141/257 (54%), Gaps = 7/257 (2%)
Query: 252 EFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ GY ++ T+ ++ G C+ G +++A +F ++ + V+Y T +N L K G+
Sbjct: 135 KMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTS 194
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL+L + + K +P+VV N IID++C K + EA ++ EM ++G P+V TYN+LI
Sbjct: 195 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALI 254
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
C + +M+ + ++M +N + PN TFN L+ ++ +E VL M + G
Sbjct: 255 SGFCIVGKMKDATDLFNKMIFENIN--PNVYTFNILVDGFCKERRLKEAKNVLAMMMKQG 312
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
K TYN ++ Y +K +H + + ++G+ P+ SY++MIHG ++++A+
Sbjct: 313 IKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAM 372
Query: 487 SYFHEMRLKGMVPEPRT 503
+ F EM ++P+ T
Sbjct: 373 NLFKEMHCNNIIPDVVT 389
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 168/356 (47%), Gaps = 13/356 (3%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAI 208
Y P ++ L + + +Q D++ L +N+ +YG L+N A+
Sbjct: 138 YEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAAL 197
Query: 209 GVFDRRKEFGEL--DDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILN 265
+ R+ G+L ++ + ++ +C+ K V E + + E D+ T N +++
Sbjct: 198 QLL--RRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALIS 255
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C++G + +A + +I P+ T+ V+ K+ +L A + M ++G KP
Sbjct: 256 GFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKP 315
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DV T N ++D C K + +A + + RG PN+ +Y+ +I CKIK+++
Sbjct: 316 DVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLF 375
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYV 442
EM N +P+ +T+N L+ L K ++ + L + M G TYN IL
Sbjct: 376 KEMHCNN--IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALC 433
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
DK +M+ +G+ PD +YT ++ GL GRLEDA F ++ +KG +
Sbjct: 434 KNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 173/347 (49%), Gaps = 15/347 (4%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILD---VLGRARRFVELIQ--VF 179
I++ + + + EA + + VS+ SP +NA++ ++G+ + +L +F
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSK--GISPDVVTYNALISGFCIVGKMKDATDLFNKMIF 275
Query: 180 DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV 239
+ + N T+ IL++ + ++EA V + G D+ + +L+ C K V
Sbjct: 276 ENINP--NVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEV 333
Query: 240 EVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
A+ F + + +I + +I+++G+C + V EA +K++ + PD VTY +
Sbjct: 334 NKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSL 393
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
++ L K GK+ AL+L M ++G D +T N I+DALC ++ +A+ +L +MK+ G
Sbjct: 394 IDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 453
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEV 415
P++ TY +L+ LCK R+E +++ K G L I + +++ +E
Sbjct: 454 QPDICTYTTLVDGLCKNGRLEDARIVFEDLLVK-GYILDVNI-YTAMIQGFCSHGLFDES 511
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+L +ME NGC + TY +I+ + D DK EM +G+
Sbjct: 512 LDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 6/224 (2%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
+P + + +L K T + L + M G D+V + +I+ + P +
Sbjct: 69 KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
VL ++ G PNV T +LIK LC ++ ++ D++ N++++ L+
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHL--NKVSYGTLING 186
Query: 409 LKKPEEVPWVLERMERNGCKM---STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L K + L+ + R K+ + YN I+ ++ + EM KG+ PD
Sbjct: 187 LCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPD 246
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
+Y +I G G+++DA F++M + + P T ILV+
Sbjct: 247 VVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVD 290
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 162/360 (45%), Gaps = 15/360 (4%)
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYG---ILLNRYAAAH 202
V+ + P V N L L R E +++ + M L G L+ + A+
Sbjct: 49 VAASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASG 108
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI 262
EA RR D+ A+ ++ C ++ A E D T N
Sbjct: 109 RTAEA-----RRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPME--PDSYTYNT 161
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ G C G A D+++ C PD VTY + A K+ A++L M KG
Sbjct: 162 LIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKG 221
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PD++T N +++ +C + R+ +A+E L+ + + GC PN +YN ++K LC +R E
Sbjct: 222 CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAE 281
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILK 439
+ + EM QK PN +TFN L+ L + E VL+++ + GC ++ +YN IL
Sbjct: 282 KLMAEMSQKGYP--PNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILH 339
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ D+ E M +G PD SY ++ L G ++ A+ H+++ KG P
Sbjct: 340 AFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTP 399
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 129/248 (52%), Gaps = 8/248 (3%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ N ++ G+CV G + A+R D+ EPDS TY T + L +G+ G AL +
Sbjct: 123 DVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNALVVL 179
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M +G PDVVT +++A C + +A+++L EM+ +GC P++ TYN ++ +C+
Sbjct: 180 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQE 239
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
R++ E+L + C PN +++N +LK L ++ E+ ++ M + G +
Sbjct: 240 GRVDDAIEFLKSLPSHG--CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVV 297
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
T+N+++ + +++ K G P+ SY ++H + +++ A+++ M
Sbjct: 298 TFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 357
Query: 493 RLKGMVPE 500
+G P+
Sbjct: 358 VSRGCYPD 365
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 182/376 (48%), Gaps = 29/376 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +L+ + + + +++ DEM PD++ TY +++N V++A
Sbjct: 189 PDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDII---TYNVVVNGICQEGRVDDA 245
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
I G + ++ +L LC + E AE +E ++ GY ++ T N++++
Sbjct: 246 IEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLM-AEMSQKGYPPNVVTFNMLIS 304
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G V A I K C P+S++Y ++A K+ K+ A+ + M +G P
Sbjct: 305 FLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYP 364
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+V+ N ++ ALC + A+E+L ++K++GC P + +YN++I L K + + E L
Sbjct: 365 DIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELL 424
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+EM K P+ IT++ + L + EE +++ G + +T YN IL
Sbjct: 425 NEMVTKGLQ--PDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILL--- 479
Query: 443 NWDCEDKVRHTWEE----MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
C+ + H + M G P++ +YT++I GL +G +++A E+ +G+V
Sbjct: 480 -GLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVV 538
Query: 499 PEPRTGILVNDMNIKL 514
+ L+N I+L
Sbjct: 539 SKG----LINKAAIRL 550
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 36/275 (13%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILL 195
WE A +S++G Y P FN ++ L R
Sbjct: 277 WEDAEKLMAEMSQKG-YPPNVVTFNMLISFLCR--------------------------- 308
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+VE A+ V D+ ++G + ++ +L C+ K ++ A F E + Y
Sbjct: 309 -----RGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCY 363
Query: 256 -DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
DI + N +L C G V A + C P ++Y T ++ LTK GK AL L
Sbjct: 364 PDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALEL 423
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
M KG +PD++T + I LC + RI EA+ ++++ G PN YN+++ LCK
Sbjct: 424 LNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCK 483
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+ + M NG C+PNE T+ L++ L
Sbjct: 484 RRETHNAIDLFIYM-ISNG-CMPNESTYTILIEGL 516
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 183/377 (48%), Gaps = 12/377 (3%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM 182
D IVN + + A TF + EG + P SN FN ++ +L R+ F + +F+E+
Sbjct: 93 DTIVNAY-VHSHSTDQALTFLHHMIHEG-HVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL 150
Query: 183 PD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
+++ ++GI++ A + + +EFG ++ + L+ C+Y +V
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210
Query: 241 VAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
+A+ F + + G + T ++++NG+ G E + ++++ +S P++ Y
Sbjct: 211 LAKNLF-CKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCL 269
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
++ G + A ++F M EKG V+T N +I LC K+ EA++++ ++ G
Sbjct: 270 ISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV 418
PN+ TYN LI C + +M+T ++++ S P +T+N L+ K E +
Sbjct: 330 SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS--PTLVTYNTLIAGYSKVENLAGA 387
Query: 419 LE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
L+ ME S TY +++ + + +K MEK G+ PD +Y+V+IHG
Sbjct: 388 LDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHG 447
Query: 476 LYDKGRLEDALSYFHEM 492
L G +++A F +
Sbjct: 448 LCVHGNMKEASKLFKSL 464
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 143/336 (42%), Gaps = 7/336 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
P L Y ++N Y +H ++A+ G + + F NL+ L R + + A
Sbjct: 84 PCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKA 143
Query: 243 ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
F K++ D + I++ G C G + R + + P+ V Y T ++
Sbjct: 144 WWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC 203
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP-EALEVLREMKNRGCLPN 361
K G + A LF M G P+ T + +++ FK+ + E ++ MK G +PN
Sbjct: 204 CKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGF-FKQGLQREGFQMYENMKRSGIVPN 262
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
YN LI C ++ ++ EM +K +C +T+N L+ L KK E +
Sbjct: 263 AYAYNCLISEYCNGGMVDKAFKVFAEMREKGIAC--GVMTYNILIGGLCRGKKFGEAVKL 320
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+ ++ + G + TYN+++ + + D + +++ G+ P +Y +I G
Sbjct: 321 VHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSK 380
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKL 514
L AL EM + + P T ++ D +L
Sbjct: 381 VENLAGALDLVKEMEERCIAPSKVTYTILIDAFARL 416
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 142/355 (40%), Gaps = 38/355 (10%)
Query: 149 EGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVE 205
E SP ++ ++D G L D + + N TY +L+N + +
Sbjct: 186 EFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQR 245
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
E +++ K G + + A+ L+ C V+ A + F E + + T NI++
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILI 305
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G C EA + + K P+ VTY +N GK+ TA+RLF + G
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P +VT N +I + + AL++++EM+ R P+ TY LI ++ E E
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEM 425
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
ME+ +P+ T++ L+ L C ++ N
Sbjct: 426 HSLMEKS--GLVPDVYTYSVLIHGL-----------------C------------VHGNM 454
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
K+ + EM + P+ Y MIHG +G AL +EM GMVP
Sbjct: 455 KEASKLFKSLGEMH---LQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVP 506
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 45/260 (17%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
RE + G +N ++ L R ++F E +++ ++ P++V TY IL+N +
Sbjct: 290 REKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIV---TYNILINGFCDV 346
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA------------------- 242
++ A+ +F++ K G L + L+ + +++ A
Sbjct: 347 GKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTY 406
Query: 243 -----------------ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
E EK+ D+ T +++++G CV GN+ EA + +K + +
Sbjct: 407 TILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGE 466
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+P+SV Y T ++ K+G ALRL M G P+V + I LC ++ E
Sbjct: 467 MHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKE 526
Query: 346 ALEVLREMKNRGCLPNVTTY 365
A +L +M N G P+V+ Y
Sbjct: 527 AELLLGQMINSGLKPSVSLY 546
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 169/343 (49%), Gaps = 14/343 (4%)
Query: 182 MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
MPD + TY +L+ Y ++ +EAIG + + G ++ + +L+ +LC+
Sbjct: 241 MPDCM---TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 297
Query: 242 AETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A F+S K DI T +L G C G V E+++ + +++ +PD +TY T ++
Sbjct: 298 ARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLID 357
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
GK+ A +L +M G KPD+VT +I+ C R+ +AL + +EM + G P
Sbjct: 358 GCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSP 417
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE 420
N+ TYN +++ L +R E + K+G+ L T+N +L L K L
Sbjct: 418 NIITYNIILQGLFHTRRTAAAKELYVSI-TKSGTQLELS-TYNIILHGLCKNNLTDEAL- 474
Query: 421 RMERNGC----KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
RM +N C ++ T T+N+++ + D+ + + G+ PD R+Y++M L
Sbjct: 475 RMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENL 534
Query: 477 YDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
++G LE+ F M G + R ++N + KL +RG+
Sbjct: 535 IEQGSLEELDDLFLSMEENGCSADSR---MLNSIVRKLLQRGD 574
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 157/333 (47%), Gaps = 17/333 (5%)
Query: 183 PDLVNEKTYGILLNRY--------AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
PD+V +Y +LN + A +++A+ V + + G + D + ++L C
Sbjct: 199 PDVV---SYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 255
Query: 235 RYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
E T + + ++ T + ++N C G EA++ + + K EPD
Sbjct: 256 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 315
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY T + K+G++ + +LF M G KPD++T N +ID C ++ EA ++L M
Sbjct: 316 TYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 375
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---K 410
+ G P++ TY +LI C++ RM+ EM S PN IT+N +L+ L +
Sbjct: 376 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVS--PNIITYNIILQGLFHTR 433
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+ + + ++G ++ TYN+IL + D+ ++ + + + R++
Sbjct: 434 RTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 493
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+MI L GR+++A F G+VP+ RT
Sbjct: 494 IMIGALLKCGRMDEAKDLFAAHSANGLVPDVRT 526
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 13/231 (5%)
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
K P TYA + + G+L + +KG + D +T ++ LC KR +
Sbjct: 86 GKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSD 145
Query: 346 ALE-VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM-EQKNGSCLPNEITFN 403
A++ VLR M GC+P+V +YN+L+K LC R + E L M + + G P+ +++N
Sbjct: 146 AMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYN 205
Query: 404 YLLKSLKKP-----------EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
+L K ++ VL M +NG TYN IL Y + +
Sbjct: 206 TVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 265
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
T ++M G+ P+ +Y+ +++ L GR +A F M +G+ P+ T
Sbjct: 266 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 316
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 130/290 (44%), Gaps = 19/290 (6%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILL 195
F + R G P +N ++D A + E ++ M PD+V TYG L+
Sbjct: 336 LFDLMVRIG-VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV---TYGTLI 391
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFG 254
N Y +++A+ +F G ++ + +L L + A+ + S K+
Sbjct: 392 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 451
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T NIIL+G C EA R ++++ + + ++ T+ + AL K G++ A L
Sbjct: 452 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL 511
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F A G PDV T + + + L + + E ++ M+ GC + NS+++ L +
Sbjct: 512 FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQ 571
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER 424
+ YL +++K+ S + T ++LL E P V E++ R
Sbjct: 572 RGDITRAGTYLFMIDEKHFSLEAS--TASFLL------ESSPIVWEQISR 613
>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 629
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 184/397 (46%), Gaps = 47/397 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV----NEKTYGIL 194
A FKW S ++ + + A++ L RF + Q+ DEMP + +E+ + +
Sbjct: 55 ALQTFKWASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTV 114
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG 254
+ A M+ I V D +FG+ L F ++L L + ++VA F+ + G
Sbjct: 115 IRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILDVLVKVD-IDVAREFYRKQMMGSG 173
Query: 255 Y--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG--- 309
D T I++ G C+ + + R + + +P++V Y T ++AL K GK+G
Sbjct: 174 VQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRAR 233
Query: 310 ----------------------------TALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
AL L + + G PDVVT +++ LC
Sbjct: 234 SLMDEIEEPNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAG 293
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
R+ EA+E+L ++ +G L +V YN+L++ C++ +++ + +L EME+K CLPN T
Sbjct: 294 RVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERK--GCLPNVET 351
Query: 402 FNYLLKSLKKPEEVPWVLER---MERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEM 457
+N L+ L+ M+ +G + DTY+ ++K L+ E+ ++ E M
Sbjct: 352 YNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLK-ILELM 410
Query: 458 E--KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
E K G G Y +++GLY K ++AL + +M
Sbjct: 411 EESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKM 447
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 167/393 (42%), Gaps = 50/393 (12%)
Query: 154 PGSNVFNAILDVL------GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P + V+N +L L GRAR ++ I E P N+ T+ +L+ Y + +A
Sbjct: 211 PNAVVYNTLLHALCKNGKVGRARSLMDEI----EEP---NDVTFNVLIAAYCKEENLVQA 263
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNG 266
+ + ++ G + D+ ++ LC V A E + + G D+ N +L G
Sbjct: 264 LVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRG 323
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C LG + A RF K++ + C P+ TY ++ G AL +F M G +
Sbjct: 324 FCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWN 383
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNR--GCLPNVTTYNSLIKHLCKIKRMETVYEY 384
T + +I L F RI E L++L M+ G ++ YNS++ L K + E+
Sbjct: 384 FDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEF 443
Query: 385 LDEMEQ---------------------KNGSCL----------PNEITFNYLLKSLKKP- 412
L +ME+ KN + PN + ++ L+ +
Sbjct: 444 LMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEG 503
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
E ++ M +G + +N ++ + ++ ++M +G PD+ +Y+
Sbjct: 504 NLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYS 563
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+I L KG + ALS F++M KG+ P+ T
Sbjct: 564 PLIDALCRKGNFQKALSIFNQMIEKGITPDSST 596
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
L N +TY IL++ + + M + A+ +F+ K G + + L+ L +E
Sbjct: 346 LPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLK 405
Query: 245 FFE---SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK-----SKCEPDSVTYA 296
E K G I N +L G +Y+ K W + ++ K P +V +
Sbjct: 406 ILELMEESKGGSGGRISPYNSVLYG------LYK-KNMWDEALEFLMKMEKLFPRAVDRS 458
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+ +KG + A +F M +G P+++ +C++ C + + EA E++ EM
Sbjct: 459 LRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGH 518
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---E 413
G + +N+LI C + E+ + LD+M + C+P+ T++ L+ +L + +
Sbjct: 519 GYFLVASGFNALIHGFCGQGKDESALKLLDDMVGR--GCVPDRGTYSPLIDALCRKGNFQ 576
Query: 414 EVPWVLERMERNGCKMSTDTYNVIL 438
+ + +M G + T+N +L
Sbjct: 577 KALSIFNQMIEKGITPDSSTWNSLL 601
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 345 EALEVLREMKNRGCLPNVT----TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
A + L+ K LP T TY +LI+ LC R +TVY+ LDEM GS P+E
Sbjct: 51 SATKALQTFKWASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSP-PDEE 109
Query: 401 TFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
F +++ L + +P VL+ + + G S +N IL + V D + ++M
Sbjct: 110 IFLTVIRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILDVLVKVDIDVAREFYRKQM 169
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517
G+ D ++ +++ GL R+ D M+ +G+ P ++ N + L +
Sbjct: 170 MGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKP---NAVVYNTLLHALCKN 226
Query: 518 GEQGK 522
G+ G+
Sbjct: 227 GKVGR 231
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 230 LLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
+L C V+ A+ F+ NE G +I + +++G+C GN+ EA +++
Sbjct: 461 ILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGY 520
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
+ + ++ +GK +AL+L M +G PD T + +IDALC K +AL
Sbjct: 521 FLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALS 580
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCK 374
+ +M +G P+ +T+NSL+ L K
Sbjct: 581 IFNQMIEKGITPDSSTWNSLLIRLSK 606
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 173/376 (46%), Gaps = 16/376 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D + AY+ + + G P +N+I+ L +A+ + ++V + M PD +
Sbjct: 211 DSDKAYSTYHEMLDRG-ILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM-- 267
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY +L+ Y ++ +EAIG + + G D+ + L+ +LC+ A F+S
Sbjct: 268 -TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
K +I T +L G+ G + E ++++ PD ++ + A +GK
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGK 386
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A+ +F M ++G P+ VT +I LC R+ +A+ +M + G P YNS
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMER 424
LI LC + E E + EM + G CL N I FN ++ S K V + E M R
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDR-GICL-NTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G K + TYN ++ Y D+ M G+ P+ +Y+ +I+G R+ED
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 485 ALSYFHEMRLKGMVPE 500
AL F EM G+ P+
Sbjct: 565 ALVLFKEMESSGVSPD 580
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 152/358 (42%), Gaps = 44/358 (12%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PDL TYGIL+ A ++ + G D AF LL LC K A
Sbjct: 85 PDLC---TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 243 ETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRF---WKDIIKSKCEPDSVTYAT 297
E G ++ + NI+L G C EA D PD V+Y T
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+N K+G A + M ++G PDVVT N II ALC + + +A+EVL M G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 358 CLPNVTTYNSLIKHLCK----------IKRMET--------VYEYLDEMEQKNGSCLPNE 399
+P+ TYNS++ C +K+M + Y L + KNG C+
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 400 ITFNYLLKSLKKPE------------------EVPWVLERMERNGCKMSTDTYNVILKLY 441
F+ + K KPE E+ +L+ M RNG +++++ Y
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
N D+ + +M ++G+ P+ +Y +I L GR+EDA+ YF +M +G+ P
Sbjct: 382 ANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 109/249 (43%), Gaps = 5/249 (2%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE- 348
PD TY + + G+L + +KG + D + ++ LC KR +A++
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM-EQKNGSCLPNEITFNYLLK 407
VLR M GC+PNV +YN L+K LC R + E L M + + G P+ +++ ++
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 408 SLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
K ++ M G TYN I+ DK M K G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKV 524
D +Y ++HG G+ ++A+ + +MR G+ P+ T L+ D K E K
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 525 IKLTSLGLK 533
+T GLK
Sbjct: 325 DSMTKRGLK 333
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 176/404 (43%), Gaps = 32/404 (7%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP 183
LI N+ + D +A F K R+ +P + + A++ +L ++ R + + F++M
Sbjct: 377 LICAYANQGKVD-QAMLVFSKM--RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 184 D--------LVNEKTYGIL-LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
D + N +G+ N++ A E + + DR G + F +++ C
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAE--ELILEMLDR----GICLNTIFFNSIIDSHC 487
Query: 235 RYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ V +E FE + ++ T N ++NG+C+ G + EA + ++ +P++V
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY+T +N K ++ AL LF+ M G PD++T N I+ L +R A E+ +
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN----EITFNYLLKSL 409
G ++TYN ++ LCK K + D ++ CL + TFN ++ +L
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTD------DALQMFQNLCLMDLKLEARTFNIMIDAL 661
Query: 410 KKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K +E + NG + TY ++ + + +++ + ME G D
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 721
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDM 510
++ L +G + A +Y + K E T L D+
Sbjct: 722 GMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDL 765
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 188/411 (45%), Gaps = 14/411 (3%)
Query: 106 KGEIEK-----ALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWV-SREGDYSPGSNVF 159
KG +E A E+ LT + +++ R DW++A FF W SR G YS
Sbjct: 66 KGSVEDLVRTLAAECSEVRLTSGVADSLLRRCGDDWKSALGFFLWAQSRGGGYSHTPCAC 125
Query: 160 NAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF 217
N ++D+LG+ R+ + + EM LV T + R AAA +AI +FD+ ++
Sbjct: 126 NRMVDLLGKMRQIDRMWDLLSEMHCRGLVTVDTIAKSIRRLAAARRWRDAILLFDQLEDL 185
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
G + LL LC+ + VE+A F D T NI ++GWC + + EA
Sbjct: 186 GLERNTETMNVLLDALCKERKVELAREVFVMLSPHIAPDAYTFNIFVHGWCSVRRIDEAM 245
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+++ P +TY + A K+ + +M +G P+V+T I+ +L
Sbjct: 246 WTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNVITYTMIMTSL 305
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
+R EAL V MK+ GC P+ YN+LI L + + + +E
Sbjct: 306 TKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVF-RVEMPRNVVPR 364
Query: 398 NEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE-DKVRHT 453
N T+N ++ L + ++ VL+ ME CK TY +L+L + + H
Sbjct: 365 NVATYNTMISILCQYGRDDDALDVLKEMEAQSCKPDLQTYQPLLRLLFGRRGQTGAIHHL 424
Query: 454 WEEM-EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
E+ ++ G+G D +YT++IHGL G + A + EM +VP P+T
Sbjct: 425 LSELRDRNGLGLDLDTYTLLIHGLCRVGETDWAYQLYDEMVGSEIVPRPKT 475
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 187/383 (48%), Gaps = 10/383 (2%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE- 181
++I+N + + + Y F + V + + PGSN FN +L + + F + F+E
Sbjct: 98 EVIINAYVQSQSLDSSIYYFNEMVDK--GFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES 155
Query: 182 -MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
+ +++ ++GI++ A +E++ + +EFG ++ + L+ C+ +E
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 241 VA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
A + FFE K + T ++++G G + ++ + + P+ TY +
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
N L K G+ A ++F M E+G ++VT N +I LC + + EA EV+ +MK+ G
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW-- 417
PN+ TYN+LI C ++++ +++ + S P+ +T+N L+ K +
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLS--PSLVTYNILVSGFCKKGDTSGAG 393
Query: 418 -VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
V++ ME G K S TY +++ + D +K ME+ G+ PD +Y+V+IHG
Sbjct: 394 KVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGF 453
Query: 477 YDKGRLEDALSYFHEMRLKGMVP 499
KGR+ +A F M K P
Sbjct: 454 CIKGRMNEASRLFKSMVEKKFEP 476
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 9/291 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + +N +++ L + R + +VFDEM + N TY L+ EA V
Sbjct: 266 PNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEV 325
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
D+ K G +L + L+ C + + A + K+ + T NI+++G+C
Sbjct: 326 MDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCK 385
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G+ A + K++ + +P VTY ++ + + A++L +M E G PDV T
Sbjct: 386 KGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHT 445
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ +I C K R+ EA + + M + PN YN+++ CK EME
Sbjct: 446 YSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREME 505
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
+K PN ++ Y+++ L +K +E ++E+M +G S N+I
Sbjct: 506 EK--ELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 155/359 (43%), Gaps = 9/359 (2%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
RE +SP ++ ++D + + +F EM + NE TY +L++ +
Sbjct: 190 REFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIK 249
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNII 263
++ ++++ +E G +L + ++ LC+ + A + F E + +I T N +
Sbjct: 250 KQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTL 309
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G C EA + P+ +TY T ++ KLG AL L + + +G
Sbjct: 310 IGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGL 369
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P +VT N ++ C K A +V++EM+ RG P+ TY LI + ME +
Sbjct: 370 SPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
ME+ + P+ T++ L+ + E + + M + + YN ++
Sbjct: 430 LRSSMEELGLT--PDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLG 487
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
Y + + EME+K + P+ SY MI L + + ++A +M G+ P
Sbjct: 488 YCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGP 546
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P +N ++D R+ + + + ++ P LV TY IL++ +
Sbjct: 335 NPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLV---TYNILVSGFCKKGDTSG 391
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
A V +E G + L+ R ++E A S E G D+ T ++++
Sbjct: 392 AGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL-RSSMEELGLTPDVHTYSVLI 450
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G+C+ G + EA R +K +++ K EP+ V Y T V K+G ALRLF+ M EK
Sbjct: 451 HGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELP 510
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
P+V + +I+ LC +++ EA ++ +M + G P+ + N
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILN 552
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 158/340 (46%), Gaps = 47/340 (13%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGR------ARRFVELIQVFDEMPDLVNEKT 190
+AA+ F+ + G P + +NA++D L + AR + + D PD+V T
Sbjct: 113 DAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVV---T 169
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESE 249
Y L+ V+EA+ F + E G + L +F ++ LCR + + A E F E
Sbjct: 170 YNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMI 229
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+F ++ T +++++G C + EA++ ++ C PD V Y V + G+L
Sbjct: 230 DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLD 289
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+AL L + M +G PDVVT +ID LC R+ +A E+ RE+ C PNV TY++LI
Sbjct: 290 SALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALI 349
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKM 429
C+ R++ + + EM +C PN +T+N ++ W L ++RN
Sbjct: 350 GGYCRASRVDEGGKVMREM-----ACRPNVVTYNTMI----------WGLSMVDRN---- 390
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
++ + EM + G PD R+Y
Sbjct: 391 ------------------EEAYGMFREMSECGFVPDARTY 412
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 167/378 (44%), Gaps = 15/378 (3%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK----T 190
D +AA++ + + EG + IL L R R + ++ FD +L + + +
Sbjct: 40 DLDAAFSLLREMDVEG-MQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVS 98
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGEL-DDLSAFQNLLLWLCRYKHVEVAETFF-ES 248
Y L+N V+ A +F + G + + L+ LC+ ++ A E+
Sbjct: 99 YTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEA 158
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
K +F D+ T N ++ LG V EA + + + P V++ + L + +L
Sbjct: 159 RKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRL 218
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL +F M ++ P++VT + +ID LC ++ EA ++L M + GC P++ Y L
Sbjct: 219 ADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPL 278
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERN 425
+ R+++ L M + C+P+ +T+ ++ L K ++ + + N
Sbjct: 279 VLGFSAAGRLDSALGLLRRMVSQG--CIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVAN 336
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
C + TY+ ++ Y D+ EM + P+ +Y MI GL R E+A
Sbjct: 337 KCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEA 393
Query: 486 LSYFHEMRLKGMVPEPRT 503
F EM G VP+ RT
Sbjct: 394 YGMFREMSECGFVPDART 411
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 127/257 (49%), Gaps = 7/257 (2%)
Query: 258 KTMNIILNGWCVLGNVYEA-KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+T +IIL G C G V +A + F + + +PD V+Y T +N L K G++ A LF+
Sbjct: 61 RTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFR 120
Query: 317 AMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M G +P+ T N ++D LC + R+ A V+ E + R P+V TYN+L+ L ++
Sbjct: 121 KMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQL 180
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTD 432
R++ +M ++ +P ++FN ++ L + + LE M +
Sbjct: 181 GRVDEALATFTQMTEEGY--VPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 238
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY+V++ D D+ + + M +G PD +YT ++ G GRL+ AL M
Sbjct: 239 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 298
Query: 493 RLKGMVPEPRTGILVND 509
+G +P+ T +V D
Sbjct: 299 VSQGCIPDVVTYTVVID 315
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 14/241 (5%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F ++ EG Y P FNAI+ L RARR + ++VF+EM P+LV TY
Sbjct: 186 ALATFTQMTEEG-YVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV---TYS 241
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
++++ + ++EA + DR G DL A+ L+L ++ A ++
Sbjct: 242 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ 301
Query: 253 FGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
D+ T ++++ C +G V +A +++++ +KC P+ VTY+ + + ++
Sbjct: 302 GCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEG 361
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++ M E +P+VVT N +I L R EA + REM G +P+ TY L +
Sbjct: 362 GKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRA 418
Query: 372 L 372
L
Sbjct: 419 L 419
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 36/277 (12%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N+++ G+C ++ A +++ + + T + + L + G++ AL F A
Sbjct: 27 TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDAS 86
Query: 319 WEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREM-KNRGCLPNVTTYNSLIKHLCKIK 376
E +PDVV+ +I+ LC R+ A ++ R+M GC PN TYN+L+ LCK
Sbjct: 87 LELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQD 146
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNV 436
R++ + E +++ + P+ +T+N L+ +L + V
Sbjct: 147 RLDAARAVITEARKRDFA--PDVVTYNTLMAALFQLGRV--------------------- 183
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
D+ T+ +M ++G P S+ +I GL RL DAL F+EM +
Sbjct: 184 -----------DEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRD 232
Query: 497 MVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLK 533
P T +V D K + E + + ++ S G +
Sbjct: 233 FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCR 269
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 10/204 (4%)
Query: 302 LTKKGKLGTALRLFQAMWEKGRKP-DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
+ + G AL+LF+ + P VT N +I C + A +LREM G
Sbjct: 1 MVRAGSHNQALQLFR--ENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQC 58
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLD-EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
N T + +++ LC+ R+ E+ D +E + P+ +++ L+ L K V
Sbjct: 59 NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQ--PDVVSYTTLINGLCKLGRVDAAF 116
Query: 420 ERMER----NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
+ + GC+ + TYN ++ D D R E K+ PD +Y ++
Sbjct: 117 DLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAA 176
Query: 476 LYDKGRLEDALSYFHEMRLKGMVP 499
L+ GR+++AL+ F +M +G VP
Sbjct: 177 LFQLGRVDEALATFTQMTEEGYVP 200
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
I+ + R R +A F + + R D+ P ++ ++D L ++ + E Q+ D M
Sbjct: 208 IITGLCRARRLADALEVFNEMIDR--DFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265
Query: 183 ----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
PDLV Y L+ ++AA ++ A+G+ R G + D+ + ++ LC+
Sbjct: 266 EGCRPDLV---AYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGR 322
Query: 239 VEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
V+ A E F E N+ ++ T + ++ G+C V E + +++ C P+ VTY T
Sbjct: 323 VDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNT 379
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ L+ + A +F+ M E G PD T
Sbjct: 380 MIWGLSMVDRNEEAYGMFREMSECGFVPDART 411
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 174/372 (46%), Gaps = 11/372 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLN 196
+AA+ F +S +G P + + ++ L +A + + ++ V Y L++
Sbjct: 196 DAAHKLFVEMSNKG-CPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSV--PVYNALID 252
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD 256
+E AI + + G ++ ++ ++ LC +VE+A F ++ G D
Sbjct: 253 GMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF-AQMFLRGCD 311
Query: 257 --IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
I T ++ G + G +YEA WK +I+ CEP+ V Y T ++ L G L AL++
Sbjct: 312 ANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV 371
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
M G P+V T + +ID + A E M + GC PNV TY ++ LCK
Sbjct: 372 CDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCK 431
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMST 431
+ +++M + C PN ITFN +K L V W +LERM+ +GC +
Sbjct: 432 NSMFDQANSLVEKMTLE--GCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNI 489
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TYN +L + ++ ++E+E + + P+ +Y +++G G + +AL F +
Sbjct: 490 TTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGK 549
Query: 492 MRLKGMVPEPRT 503
++G P+ T
Sbjct: 550 ALVRGTAPDSIT 561
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 190/451 (42%), Gaps = 76/451 (16%)
Query: 127 NVINRYRFD--WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP- 183
+V+ R + D + FF ++ + ++ + +++ LGR + + +M
Sbjct: 43 DVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKM 102
Query: 184 DLVN--EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
D +N E + ++N Y E+A+ +F R EFG + + +LL L ++
Sbjct: 103 DGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQM 162
Query: 242 AETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ + +K+ ++ T NI+L C V A + + ++ C PD+VTY T V+
Sbjct: 163 INPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVS 222
Query: 301 ALTKKGKLG------------------------------TALRLFQAMWEKGRKPDVVTC 330
+L K GK+ A++L M + G P+VV+
Sbjct: 223 SLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSY 282
Query: 331 NCIIDALC-----------------------------------FKKRIPEALEVLREMKN 355
+CII++LC + ++ EAL++ + M
Sbjct: 283 SCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
GC PNV YN+LI LC +E + D+M Q++G CLPN T++ L+ K ++
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM-QRSG-CLPNVTTYSILIDGFAKSGDL 400
Query: 416 PWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
E RM +GC+ + TY ++ + D+ E+M +G P+ ++
Sbjct: 401 VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTF 460
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
I GL GR+E A+ M+ G +P T
Sbjct: 461 IKGLCGNGRVEWAMKLLERMQGHGCLPNITT 491
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 176/396 (44%), Gaps = 51/396 (12%)
Query: 150 GDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEE 206
G + P V+NA++D + + R I++ EM D N +Y ++N + VE
Sbjct: 238 GRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVEL 297
Query: 207 AI-----------------------GVFDRRKEFGELD------------DLSAFQNLLL 231
A G F R K + LD ++ A+ L+
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIH 357
Query: 232 WLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
LC +E A + + +++ ++ T +I+++G+ G++ A W +I C P
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+ VTY V+ L K A L + M +G P+ +T N I LC R+ A+++L
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLL 477
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
M+ GCLPN+TTYN L+ L ++ + E + E+E +N PN +T+N +L
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQ--PNLVTYNTVLYGFS 535
Query: 411 KPEEVPWVLERMER---NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK----KGMG 463
+ + L+ + G + TYN ++ Y + KV+ + +E+ K
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK---QGKVKIAAQLVERVSSMKEWH 592
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
PD +YT +I G + +E+A+++ + +G+ P
Sbjct: 593 PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 16/283 (5%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNV------INRYRFDWE---AAYTFFKWVSREGDY 152
+ + G +E+AL C+ + NV I+ + + A+ T+ + +S
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH--GC 415
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGILLNRYAAAHMVEEAIG 209
P + ++DVL + F + + ++M N T+ + VE A+
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMK 475
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWC 268
+ +R + G L +++ + LL L R E A F E E ++ T N +L G+
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE-KGRKPDV 327
G + EA + + + PDS+TY T ++A K+GK+ A +L + + K PD+
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDI 595
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
+T +I C I EA+ L + N+G PN T+N+L++
Sbjct: 596 ITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 171/355 (48%), Gaps = 16/355 (4%)
Query: 159 FNAILDVL---GRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFD 212
+N +L L G R L++ P N +Y +L+ A + ++A+G+
Sbjct: 80 YNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLR 139
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLG 271
+ G D+ + L+ LC V+ A E E ++ ++ + +L G+C G
Sbjct: 140 SMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSG 199
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ + + ++ + EPD V Y +++L K GK A + M +G +P+VVT N
Sbjct: 200 RWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYN 259
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I+ +C + + EA+ VL++M +G P+V TYN+LIK L + M+ L+EM +
Sbjct: 260 VLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRG 319
Query: 392 NGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
PN +TFN +++ L + + V ME GC ++ TYN+++ +
Sbjct: 320 KNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVR 379
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHG---LYDKGRLEDALSYFHEMRLKGMVPE 500
K +EM G+ PD +Y+++I G ++ R ED LS MR +G+ PE
Sbjct: 380 KAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLS---TMRDRGIEPE 431
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 153/355 (43%), Gaps = 44/355 (12%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N Y LL Y + E+ VF E G D+ + L+ LC+ + A
Sbjct: 184 NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 243
Query: 247 ESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ + ++ T N+++N C G+V EA K + + PD VTY T + L+
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV 303
Query: 306 GKLGTALRLFQAMWEKGR---KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
++ A+ L + M +G+ KP+VVT N +I LC R+ +A +V M+ GC+ N+
Sbjct: 304 LEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNL 362
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK----------- 411
TYN LI L ++ ++ E +DEM P+ T++ L+K K
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLE--PDSFTYSILIKGFCKMWQVDRAEDLL 420
Query: 412 ---------PE---EVPWVLERMERNGCKMSTDTYN----------VILKLYVNWDCEDK 449
PE +P ++ E+ + + + +N V ++ C+
Sbjct: 421 STMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAG 480
Query: 450 VRHTWEEMEK----KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
T +E+ K +G+ PD +Y+++I+ G +E A +M G +P+
Sbjct: 481 DLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPD 535
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 157/382 (41%), Gaps = 39/382 (10%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
WE F +S +G P ++ ++D L + + + V D M P++V
Sbjct: 201 WEDVGKVFVEMSEKG-IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVV--- 256
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY +L+N V+EAIGV + E G D+ + L+ L ++ A E
Sbjct: 257 TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM 316
Query: 249 --EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
KN ++ T N ++ G C +G + +A + + ++ C + VTY + L +
Sbjct: 317 VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVH 376
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
K+ A+ L M G +PD T + +I C ++ A ++L M++RG P + Y
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQK------------NGSCLPNEI-TFNYLLKSLKKPE 413
L+ +C+ ME +EM+ +G+C ++ T LLKS+
Sbjct: 437 PLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG 496
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
P + TY++++ ++ + ++M G PD + +I
Sbjct: 497 LTPDAV-------------TYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543
Query: 474 HGLYDKGRLEDALSYFHEMRLK 495
G KG + L EM K
Sbjct: 544 QGYSTKGEINKVLELIREMITK 565
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 17/251 (6%)
Query: 291 DSVTYATFVNALTKKG---KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
D+V+Y T + AL ++G + G LR +P+ V+ ++ ALC + +A+
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+LR M++ G +V TY +LI+ LC ++ E + EM + PN + ++ LL+
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG--IEPNVVVYSSLLQ 193
Query: 408 SLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
K E+V V M G + Y ++ K + M ++G+ P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT---------GILVNDMNIKLK 515
+ +Y V+I+ + +G +++A+ +M KG+ P+ T +L D + L
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 516 ERGEQGKKVIK 526
E +GK ++K
Sbjct: 314 EEMVRGKNIVK 324
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 183/389 (47%), Gaps = 13/389 (3%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
LT +++V+ + + + +E AY F+ S+ G +P S + +++D LG+ + ++F
Sbjct: 427 LTVNIMVDRLCKAK-KFEPAYEMFETASQRG-CNPNSVTYCSLIDGLGKKGNVDDAYRLF 484
Query: 180 DEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
+ M D N Y L+ + E+ +F G DL+ + + +
Sbjct: 485 ENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKA 544
Query: 237 KHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
VE FE K +G+ D+++ +I+++G G E + + + D+
Sbjct: 545 GDVEKGRAIFEDIKG-YGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARA 603
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y V+ K GKL A + + M K P V T IID L R+ EA + E K
Sbjct: 604 YNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK 663
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
++G NV Y+SLI K+ R++ Y L+EM +K + PN T+N L+ +L K EE
Sbjct: 664 SKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLT--PNVYTWNSLMDALVKAEE 721
Query: 415 VPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
+ L + M+ C +T TY++++ +K W+EM+K+G+ P+ +YT
Sbjct: 722 INEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTT 781
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
MI GL G + DA S F + G P+
Sbjct: 782 MIAGLAKVGNITDACSLFERFKANGGTPD 810
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 177/402 (44%), Gaps = 44/402 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+ A+ FF + +G P + +++ VL +A R E ++F +M + Y
Sbjct: 269 DMAWKFFHELKSQG-LKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNT 327
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
++ Y +A E A + D+ KE G + + +F ++L L + + V+ A T FE+ K +
Sbjct: 328 MIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA 387
Query: 254 GYDIKTMNIILNGWCVLGNVYE-----------------------------AKRF----- 279
+ T NII++ C+ G V E AK+F
Sbjct: 388 EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYE 447
Query: 280 -WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
++ + C P+SVTY + ++ L KKG + A RLF+ M + G + V +I
Sbjct: 448 MFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFF 507
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
R + ++ +EM RGC P++T N+ + + K +E +++ K LP+
Sbjct: 508 MHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDI--KGYGFLPD 565
Query: 399 EITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+++ L+ L K E + M++ G + YN ++ + DK E
Sbjct: 566 VRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLE 625
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
EM+ K + P +Y +I GL RL++A F E + KG+
Sbjct: 626 EMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGI 667
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 162/374 (43%), Gaps = 15/374 (4%)
Query: 162 ILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
++ L R RR + +V M L Y +L+ A A E A+ + + +E G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAK 277
+ F L+ L R VE A + K DI N+ ++ + GNV A
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+F+ ++ +PD V+Y + + L K G+L A LF M + P N +I
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
+ A ++L ++K RGC+P+V ++NS++ L K ++++ + M++ P
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK---DAEP 389
Query: 398 NEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N T+N ++ L K EE + + ME G + T N+++ + +
Sbjct: 390 NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMF 449
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDM--NI 512
E ++G P+ +Y +I GL KG ++DA F M G P ++ + N
Sbjct: 450 ETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP---VVYTSLIRNF 506
Query: 513 KLKERGEQGKKVIK 526
+ R E G K+ K
Sbjct: 507 FMHGRKEDGHKIFK 520
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 156/374 (41%), Gaps = 61/374 (16%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRA------RRFVELIQVFDEMPDLVNEKT 190
E + FK ++R G P + N +D + +A R E I+ + +PD+ ++
Sbjct: 513 EDGHKIFKEMNRRG-CQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDV---RS 568
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY----KHVEVAE--- 243
Y IL++ A E +F K+ G D A+ ++ C+ K EV E
Sbjct: 569 YSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMK 628
Query: 244 -----------------------------TFFESEKNEFGYDIKTMNIILNGWCVLGNVY 274
F E++ ++ + +++G+ +G +
Sbjct: 629 VKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRID 688
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA ++++K P+ T+ + ++AL K ++ AL FQ+M E P+ T + +I
Sbjct: 689 EAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILI 748
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ LC ++ +A +EM+ +G +PNV TY ++I L K+ + + + G+
Sbjct: 749 NGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGT 808
Query: 395 CLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC----- 446
P+ +FN L++ + + E V E GC+++ +L +C
Sbjct: 809 --PDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAA 866
Query: 447 -----EDKVRHTWE 455
E+ VRH ++
Sbjct: 867 VVGFGENTVRHFFQ 880
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 7/208 (3%)
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
A V+AL + +L A R+ AM +P +I A+ ++ ALE+LR+M+
Sbjct: 151 ADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQE 210
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL-PNEITFNYLLKSLKKPEE 414
G V + +L++ L + R+E +DE++ GSCL P+ + +N + K
Sbjct: 211 VGYEVGVPLFTTLVRALAREGRVEGALALVDEVK---GSCLEPDIVLYNVCIDCFGKAGN 267
Query: 415 V--PW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
V W ++ G K +Y ++ + + + +ME + P +Y
Sbjct: 268 VDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNT 327
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVP 499
MI G G+ E+A +++ +G +P
Sbjct: 328 MIMGYGSAGQFENAYKLLDQLKERGCIP 355
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 189/449 (42%), Gaps = 98/449 (21%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R+ D P FN IL L R F+ + V+++M PD+V TYGIL++
Sbjct: 155 RDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVV---TYGILIHGLCKT 211
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTM 260
++A+ +FD + G L + + +L LC+ K + A+ F + + D+ T
Sbjct: 212 CKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITY 271
Query: 261 NIILNGWC--------------------VLG---------NVYEAKRF------WKDIIK 285
N++LNG+C +LG ++ A+R+ ++ +++
Sbjct: 272 NVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+PD + Y + L+++G++ AL L M E+G +PD + N +I C + E
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A + E+ C PN TY+ LI +CK + EME+ CLP+ +TFN L
Sbjct: 392 AESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKL--GCLPSVVTFNSL 449
Query: 406 LKSLKKPEEV---------------PWVLER-----------------MER--------- 424
+ L K + P + R MER
Sbjct: 450 INGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILK 509
Query: 425 ----------NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+G TYN+++ + + + ++EM+ KG PD +Y +I
Sbjct: 510 AYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLID 569
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
GLY GR EDAL F +M KG VPE T
Sbjct: 570 GLYRAGRNEDALEIFEQMVKKGCVPESST 598
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 174/386 (45%), Gaps = 40/386 (10%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+T + ++++G + G + +++ L RARR+ E + +M PD++ Y
Sbjct: 287 AFTLLQLLTKDG-HILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVM---LYT 342
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF-FESEKN 251
I++ + V EA+ + E G D + L+ C +++ AE+ E K+
Sbjct: 343 IMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKH 402
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ + T +I++ G C G + +A+ +K++ K C P VT+ + +N L K +L A
Sbjct: 403 DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462
Query: 312 LRLFQAMWEKGRKP--------------DVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
LF M E RKP D+ + +++ LC I +A ++L ++ + G
Sbjct: 463 RLLFYQM-EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSG 521
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EE 414
LP++ TYN LI CK + ++ EM+ K +P+ +T+ L+ L + E+
Sbjct: 522 VLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGH--MPDSVTYGTLIDGLYRAGRNED 579
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK----VRHTWEEMEKKGMGPDQRSYT 470
+ E+M + GC + TY I+ W C + W + + G +
Sbjct: 580 ALEIFEQMVKKGCVPESSTYKTIM----TWSCRENNISLALSVWMKYLRDFRGWEDEKVR 635
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKG 496
V+ +D L+ A+ EM +K
Sbjct: 636 VVAES-FDNEELQTAIRRLLEMDIKS 660
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 45/284 (15%)
Query: 258 KTMNIILNGWCVLGNVYEAKRFWK---DIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
+T+ ++ G + N +E +WK ++ S + S ++ + A ++ G A+
Sbjct: 93 RTVQDLIIGKLIKENAFEL--YWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVES 150
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M + KPD+ N I+ L K+ AL V +M P+V TY LI LCK
Sbjct: 151 FGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCK 210
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMST 431
+ + DEM + LPN+I ++ +L L KK + + +M +GC
Sbjct: 211 TCKTQDALVLFDEMTDR--GILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDL 268
Query: 432 DTYNVILKLY-------------------------VNWDC---------EDKVRHTW-EE 456
TYNV+L + + + C + H W ++
Sbjct: 269 ITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQK 328
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
M ++ + PD YT+MI GL +GR+ +AL+ EM +G+ P+
Sbjct: 329 MLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPD 372
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 102/234 (43%), Gaps = 6/234 (2%)
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKE 216
N F ++ G + F E+ Q+ MPD V TYG L++ A E+A+ +F++ +
Sbjct: 534 NGFCKFGNINGAFKLFKEM-QLKGHMPDSV---TYGTLIDGLYRAGRNEDALEIFEQMVK 589
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF-GYDIKTMNIILNGWCVLGNVYE 275
G + + S ++ ++ W CR ++ +A + + +F G++ + + ++ +
Sbjct: 590 KGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTA 649
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
+R + IKSK D Y F+ L + + A +F + + +C +I
Sbjct: 650 IRRLLEMDIKSK-NFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIG 708
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
LC + + A++V RG N L+ +L + R + + ME
Sbjct: 709 RLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLANRME 762
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 170/357 (47%), Gaps = 15/357 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + E + + D M PDLV TYG ++N
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLV---TYGAVVNGLCKRG 232
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
+ A+ + ++ + ++ + ++ LC+Y+H + A F E E ++ T +
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ C G +A R D+I+ K P+ VT++ ++A KKGKL A +L++ M ++
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
P++ T + +I+ C R+ EA ++L M + CLPNV TYN+LI CK KR++
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
E EM Q+ + N +T+ L+ + + V ++M G + TYN++L
Sbjct: 413 MELFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
K +E +++ M PD +Y +MI G+ G+ + YF LK
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVASALK 527
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 166/389 (42%), Gaps = 48/389 (12%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV----NEKTYGILLNRYAAAHMVEEAIGVFDRR 214
F+ +L + + +F +L+ F E +++ N TY IL+N + + A+ + +
Sbjct: 81 FSKLLSAIAKMNKF-DLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKM 139
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGN 272
+ G D+ +LL C + A + + E GY D T +++G +
Sbjct: 140 MKLGYEPDIVTLNSLLNGFCHGNRISDAVALVD-QMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
EA +++ C+PD VTY VN L K+G AL L M + +VV +
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+ID+LC + +AL + EM+N+G PNV TY+SLI LC R L +M ++
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 393 GSCLPNEITFNYLLKS--------------------------------------LKKPEE 414
+ PN +TF+ L+ + L + E
Sbjct: 319 IN--PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+LE M R C + TYN ++ + DK + EM ++G+ + +YT +IH
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G + ++A F +M G+ P T
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILT 465
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 158/340 (46%), Gaps = 47/340 (13%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGR------ARRFVELIQVFDEMPDLVNEKT 190
+AA+ F+ + G P + +NA++D L + AR + + D PD+V T
Sbjct: 63 DAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVV---T 119
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESE 249
Y L+ V+EA+ F + E G + L +F ++ LCR + + A E F E
Sbjct: 120 YNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMI 179
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+F ++ T +++++G C + EA++ ++ C PD V Y V + G+L
Sbjct: 180 DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLD 239
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+AL L + M +G PDVVT +ID LC R+ +A E+ RE+ C PNV TY++LI
Sbjct: 240 SALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALI 299
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKM 429
C+ R++ + + EM +C PN +T+N ++ W L ++RN
Sbjct: 300 GGYCRASRVDEGGKVMREM-----ACRPNVVTYNTMI----------WGLSMVDRN---- 340
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
++ + EM + G PD R+Y
Sbjct: 341 ------------------EEAYGMFREMSECGFVPDARTY 362
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 152/356 (42%), Gaps = 42/356 (11%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETF 245
N++T I+L V +A+ FD E D+ ++ L+ LC+ V+ A
Sbjct: 9 NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68
Query: 246 FESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
F G + T N +++G C + A+ + K PD VTY T + AL
Sbjct: 69 FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALF 128
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
+ G++ AL F M E+G P +V+ N II LC +R+ +ALEV EM +R PN+
Sbjct: 129 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 188
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQK-------------------------------- 391
TY+ +I LCK +++ + LD M +
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 248
Query: 392 -NGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ C+P+ +T+ ++ L K ++ + + N C + TY+ ++ Y
Sbjct: 249 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 308
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ EM + P+ +Y MI GL R E+A F EM G VP+ RT
Sbjct: 309 DEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDART 361
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 127/257 (49%), Gaps = 7/257 (2%)
Query: 258 KTMNIILNGWCVLGNVYEA-KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+T +IIL G C G V +A + F + + +PD V+Y T +N L K G++ A LF+
Sbjct: 11 RTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFR 70
Query: 317 AMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M G +P+ T N ++D LC + R+ A V+ E + R P+V TYN+L+ L ++
Sbjct: 71 KMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQL 130
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTD 432
R++ +M ++ +P ++FN ++ L + + LE M +
Sbjct: 131 GRVDEALATFTQMTEEGY--VPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 188
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY+V++ D D+ + + M +G PD +YT ++ G GRL+ AL M
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 248
Query: 493 RLKGMVPEPRTGILVND 509
+G +P+ T +V D
Sbjct: 249 VSQGCIPDVVTYTVVID 265
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 14/241 (5%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F ++ EG Y P FNAI+ L RARR + ++VF+EM P+LV TY
Sbjct: 136 ALATFTQMTEEG-YVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV---TYS 191
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
++++ + ++EA + DR G DL A+ L+L ++ A ++
Sbjct: 192 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ 251
Query: 253 FGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
D+ T ++++ C +G V +A +++++ +KC P+ VTY+ + + ++
Sbjct: 252 GCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEG 311
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++ M E +P+VVT N +I L R EA + REM G +P+ TY L +
Sbjct: 312 GKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRA 368
Query: 372 L 372
L
Sbjct: 369 L 369
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLRE 352
T + + L + G++ AL F A E +PDVV+ +I+ LC R+ A ++ R+
Sbjct: 12 TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 71
Query: 353 M-KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
M GC PN TYN+L+ LCK R++ + E +++ + P+ +T+N L+ +L +
Sbjct: 72 MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFA--PDVVTYNTLMAALFQ 129
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
V D+ T+ +M ++G P S+
Sbjct: 130 LGRV--------------------------------DEALATFTQMTEEGYVPTLVSFNA 157
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLG 531
+I GL RL DAL F+EM + P T +V D K + E + + ++ S G
Sbjct: 158 IITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 217
Query: 532 LK 533
+
Sbjct: 218 CR 219
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
I+ + R R +A F + + R D+ P ++ ++D L ++ + E Q+ D M
Sbjct: 158 IITGLCRARRLADALEVFNEMIDR--DFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 215
Query: 183 ----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
PDLV Y L+ ++AA ++ A+G+ R G + D+ + ++ LC+
Sbjct: 216 EGCRPDLV---AYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGR 272
Query: 239 VEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
V+ A E F E N+ ++ T + ++ G+C V E + +++ C P+ VTY T
Sbjct: 273 VDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNT 329
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ L+ + A +F+ M E G PD T
Sbjct: 330 MIWGLSMVDRNEEAYGMFREMSECGFVPDART 361
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 183/378 (48%), Gaps = 16/378 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+AAY F + + P S F+A++ L + + VE ++F+EM PD E T
Sbjct: 232 QAAYKLFSEMEAR-EIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPD---EVT 287
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESE 249
Y L++ Y +++A + ++ + G ++ + L LC+ ++ A E E
Sbjct: 288 YTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMC 347
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ +I T N I+NG C GN+ +A + +++ ++ PD++TY T ++A K G++
Sbjct: 348 RKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMV 407
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A L + M ++G +P VVT N +++ LC ++ + +L+ M +G +PN TYNS++
Sbjct: 408 KARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIM 467
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PWVLER-MERNG 426
K C M E M + +P+ T+N L+K K + W L + M
Sbjct: 468 KQYCIRNNMRISTEIYRGMCAQ--GVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKR 525
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
++ +YN ++K + + R +EEM ++G+ Y + + Y++G +E L
Sbjct: 526 FNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTL 585
Query: 487 SYFHEMRLKGMVPEPRTG 504
E K ++ + R G
Sbjct: 586 ELCDEAIEKCLLDKARNG 603
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 150/343 (43%), Gaps = 14/343 (4%)
Query: 163 LDVLGRARRFVE-LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
LD+ FVE LI + + + + + A ++ EA FD+ +G
Sbjct: 15 LDISNSFTHFVERLIYTYKDWGS--DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGV-- 70
Query: 222 DLSAFQNLLLWLCRYKHVE----VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
LSA L C + V + F E + ++ ++ NI++N LG + EA
Sbjct: 71 ALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAH 130
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+ C PD V+Y T ++ G+L ++L + M KG KP++ T + II L
Sbjct: 131 HLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLL 190
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C ++ E +VLREM RG P+ Y +LI CK+ + Y+ EME + +P
Sbjct: 191 CKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAR--EIVP 248
Query: 398 NEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+ I F+ L+ L K E + M + G + TY ++ Y K
Sbjct: 249 DSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLH 308
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+M + G+ P+ +YT + GL G L+ A HEM KG+
Sbjct: 309 NQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGL 351
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 125/269 (46%), Gaps = 6/269 (2%)
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT-KKGKLGT 310
++G D ++ G + EA++F+ ++ + + ++ L+ K+ LG
Sbjct: 34 DWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGM 93
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
L++F + G + + N ++++L +I EA +L M+ +GC+P+V +Y ++I
Sbjct: 94 VLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIID 153
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGC 427
C + ++ V + + EM+ K PN T++ ++ L K +V VL M + G
Sbjct: 154 GYCHVGELQKVVQLVKEMQLKGLK--PNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGV 211
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
Y ++ + + EME + + PD +++ +I GL G++ +A
Sbjct: 212 FPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADK 271
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKE 516
F+EM KG P+ T + D KL E
Sbjct: 272 LFNEMIKKGFEPDEVTYTALIDGYCKLGE 300
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 175/390 (44%), Gaps = 52/390 (13%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
F ++ R RF + + +M P +V T G LLN + + +EA+ + D
Sbjct: 653 FTILIHCFCRCSRFSLALALLGKMMKLGFQPSIV---TLGSLLNGFCQGNRFQEAVSLVD 709
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLG 271
E G ++ + ++ LC+ + + A E F+ EK D T N +++G C G
Sbjct: 710 SMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSG 769
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+A R +D++K K +P+ + + ++ K+G L A L++ M + P+++T N
Sbjct: 770 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYN 829
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I+ C + R+ +A + M ++GC P+V TYN+LI CK KR+E + EM +
Sbjct: 830 SLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQ 889
Query: 392 -------------NGSCL--------------------PNEITFNYLLKSL---KKPEEV 415
+G C P+ +T+N LL L K E+
Sbjct: 890 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKA 949
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW---EEMEKKGMGPDQRSYTVM 472
++E +++N + TYN+I++ DKV+ W + +KG+ D +Y M
Sbjct: 950 LVMVEDLQKNQMDVDIITYNIIIQGMCR---NDKVKEAWCLFRSLTRKGVKLDAIAYITM 1006
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
I GL G +A M+ G +P R
Sbjct: 1007 ISGLCRNGLRREADKLCTRMKEDGFMPSER 1036
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 169/372 (45%), Gaps = 28/372 (7%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
Y P F ++L R + + M P++V Y L++ V
Sbjct: 131 YDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVV---VYNTLIDCLCKNGDVN 187
Query: 206 EAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNII 263
A+ + + ++ G L DL + LL LC + A + K D+ T +
Sbjct: 188 IALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTAL 247
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ + GN+ EA+ +K +++S P++VTY + +N L G+L A + F M KG
Sbjct: 248 IDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGC 307
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P+VVT N +I+ C +R+ + +++ + M G + + TYN+LI C++ ++ +
Sbjct: 308 FPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKD 367
Query: 384 YLDEMEQKNGSC--LPNEITFNYLLKSLKKPEEVPWVLERME--RNGCK-MSTDTYNVIL 438
M SC P+ IT LL L E+ + + R+G K + YN++
Sbjct: 368 IFSWMV----SCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIM- 422
Query: 439 KLYVNWDCE-DKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++ C+ DKV WE + +G+ PD R+YT+MI GL G +A F M+
Sbjct: 423 ---IHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKE 479
Query: 495 KGMVPEPRTGIL 506
G++ + G L
Sbjct: 480 DGIICQAEDGHL 491
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 145/336 (43%), Gaps = 10/336 (2%)
Query: 172 FVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
F E++Q +P +V+ + +L A + + I +F + + G DL +F L+
Sbjct: 603 FCEMLQS-RPIPSIVD---FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIH 658
Query: 232 WLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
CR +A + K F I T+ +LNG+C EA + + EP
Sbjct: 659 CFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEP 718
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+ V Y T +N L K L AL +F M +KG D VT N +I LC R +A +L
Sbjct: 719 NVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLL 778
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL- 409
R+M R PNV + +LI K + EM ++ S PN +T+N L+
Sbjct: 779 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRR--SVHPNILTYNSLINGFC 836
Query: 410 --KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+ + + + M GC TYN ++ + + + EM +G+ D
Sbjct: 837 IQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAF 896
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+Y +IHG G+L A F+ M G+ P+ T
Sbjct: 897 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVT 932
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 134/303 (44%), Gaps = 6/303 (1%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNII 263
++A G+F + + + F +L + + ++ F +N +D+ + I+
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ +C A ++K +P VT + +N + + A+ L +M E G
Sbjct: 657 IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+P+VV N +I+ LC + + ALE+ M+ +G + + TYN+LI LC R
Sbjct: 717 EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAAR 776
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKL 440
L +M ++ PN I F L+ + K E + + M R + TYN ++
Sbjct: 777 LLRDMVKRKID--PNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ +H ++ M KG PD +Y +I G R+ED + F EM +G+V +
Sbjct: 835 FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894
Query: 501 PRT 503
T
Sbjct: 895 AFT 897
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 142/305 (46%), Gaps = 9/305 (2%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKTMNI 262
E+A+ +F + L + F LL + + E +F + FG +D+ + I
Sbjct: 47 EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETV-IYFSQQMELFGISHDLYSFTI 105
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++ +C + A ++K +P VT+ + ++ + ++ A L +M + G
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL-PNVTTYNSLIKHLCKIKRMETV 381
+P+VV N +ID LC + ALE+L EM+ +G L ++ TYN+L+ LC
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
L +M ++ + P+ TF L+ + K +E + ++M ++ +T TYN ++
Sbjct: 226 ARILRDMTKRRIN--PDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLI 283
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ T++ M KG P+ +Y +I+G R+ED + F M +G+V
Sbjct: 284 NGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLV 343
Query: 499 PEPRT 503
+ T
Sbjct: 344 GDTFT 348
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 13/260 (5%)
Query: 122 DDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE 181
+ LI + N R+ +AA V R+ D P F A++D + +E ++ E
Sbjct: 759 NTLISGLCNSGRWT-DAARLLRDMVKRKID--PNVIFFTALIDTFVKEGNLLEAKNLYKE 815
Query: 182 M------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
M P+++ TY L+N + + +A +FD G D+ + L+ C+
Sbjct: 816 MIRRSVHPNIL---TYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCK 872
Query: 236 YKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
K VE F E D T N +++G+C G + A++ + ++ PD VT
Sbjct: 873 SKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVT 932
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y ++ L GK+ AL + + + + D++T N II +C ++ EA + R +
Sbjct: 933 YNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLT 992
Query: 355 NRGCLPNVTTYNSLIKHLCK 374
+G + Y ++I LC+
Sbjct: 993 RKGVKLDAIAYITMISGLCR 1012
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 4/206 (1%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
LG A+ +L+ PD+V TY L+ + + VE+ + +F G + D
Sbjct: 841 LGDAKHMFDLMVSKGCFPDVV---TYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT 897
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ C+ + VA+ F + DI T NI+L+ C G + +A +D+
Sbjct: 898 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 957
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K++ + D +TY + + + K+ A LF+++ KG K D + +I LC
Sbjct: 958 KNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRR 1017
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIK 370
EA ++ MK G +P+ Y+ ++
Sbjct: 1018 EADKLCTRMKEDGFMPSERIYDETLR 1043
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 7/197 (3%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
K A LF M + P +V ++ A+ + + + +M+N G ++ ++
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERME 423
LI C+ R L +M + P+ +T LL + +E +++ M
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQ--PSIVTLGSLLNGFCQGNRFQEAVSLVDSMA 712
Query: 424 RNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G + + YN ++ L N D + + + MEKKG+ D +Y +I GL + GR
Sbjct: 713 ELGLEPNVVIYNTVINGLCKNRDLNNAL-EIFYGMEKKGIVADAVTYNTLISGLCNSGRW 771
Query: 483 EDALSYFHEMRLKGMVP 499
DA +M + + P
Sbjct: 772 TDAARLLRDMVKRKIDP 788
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 179/402 (44%), Gaps = 35/402 (8%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNV-----------------FNAIL------DVLG 167
R R +AA ++R SP +++ FN ++ L
Sbjct: 162 RVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLA 221
Query: 168 RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
A + +Q F PD V TY LLN + M+ EA + R K+ G +
Sbjct: 222 DALSTLSTMQGFGLSPDAV---TYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYN 278
Query: 228 NLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK- 285
L+ R ++ A E+ N F D+ T N++ G C G V EA R ++ +
Sbjct: 279 TLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERL 338
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
PD VTY T +A K ALRL + M EKG K +VT N +I LC +
Sbjct: 339 GTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEG 398
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
AL L +M + G P+V TYN+LI CK + Y +DEM ++ + T N +
Sbjct: 399 ALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKL--DTFTLNTV 456
Query: 406 LKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN-WDCEDKVRHTWEEMEKKG 461
L +L K+ EE +L+ + G +Y ++ Y ++ E +R W+EM +K
Sbjct: 457 LYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALR-LWDEMIEKK 515
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ P +Y +I GL GRL++A+ +E+ KG+VP+ T
Sbjct: 516 LTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTT 557
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 178/395 (45%), Gaps = 17/395 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK-------TY 191
A+ + R G P +N + D + R + +++ +EM EK T+
Sbjct: 328 AFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEM----REKGVKATLVTH 383
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEK 250
I++ +E A+G ++ + G D+ + L+ C+ ++ A T E +
Sbjct: 384 NIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVR 443
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
D T+N +L C EA+ + + PD V+Y T + A K+
Sbjct: 444 RGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEP 503
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
ALRL+ M EK P + T N +I L R+ EA++ L E+ +G +P+ TTYN +I
Sbjct: 504 ALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIH 563
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGC 427
CK +E +++ ++M + S P+ +T N L+ L K ++ + E G
Sbjct: 564 AYCKEGDLENAFQFHNKMVEN--SFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGK 621
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
K+ TYN +++ D H + +ME +G+ PD +Y V++ L + GR E+A +
Sbjct: 622 KVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQN 681
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
H++ G + + + L+ ++ E G+ K
Sbjct: 682 MLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAK 716
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 162/374 (43%), Gaps = 44/374 (11%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD++ TY L++ + A + +A + D G D +L LC+ K E A
Sbjct: 413 PDVI---TYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEA 469
Query: 243 ETFFESEK------NEFGY------------------------------DIKTMNIILNG 266
+ +S +E Y I T N ++ G
Sbjct: 470 QGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKG 529
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+G + EA ++++ PD TY ++A K+G L A + M E KPD
Sbjct: 530 LSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPD 589
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVTCN +++ LC ++ +AL++ +G +V TYN+LI+ +CK ++T +
Sbjct: 590 VVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFA 649
Query: 387 EMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+ME + P+ T+N +L +L + EE +L ++ +G + + ++ V+
Sbjct: 650 DMEARG--LQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVD 707
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K T EE + +YT +++GL G+ ++A + EM KGM + T
Sbjct: 708 EAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSST 767
Query: 504 GILVNDMNIKLKER 517
I + + +K ++R
Sbjct: 768 YITLMEGLVKRQKR 781
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 109/266 (40%), Gaps = 41/266 (15%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVE 205
E +P + +N ++ L R R E I +E+ + + ++ TY I+++ Y +E
Sbjct: 513 EKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLE 572
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNII 263
A ++ E D+ L+ LC ++ A FES EK + D+ T N +
Sbjct: 573 NAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGK-KVDVITYNTL 631
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ C G+V A F+ D+ +PD+ TY ++AL++ G+ A + + E G
Sbjct: 632 IQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGT 691
Query: 324 ----------KPDVV-------------------------TCNCIIDALCFKKRIPEALE 348
KP V +++ LC + EA
Sbjct: 692 LSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKA 751
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCK 374
+L EM +G + +TY +L++ L K
Sbjct: 752 ILDEMMQKGMSVDSSTYITLMEGLVK 777
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 167/363 (46%), Gaps = 16/363 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
Y P N++L+ R E + + D+M PD V T+ L++ +
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV---TFTTLVHGLFQHNKAS 197
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIIL 264
EA+ + +R G DL + ++ LC+ ++A + EK + D+ N I+
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G C ++ +A + + +PD TY ++ L G+ A RL M EK
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREM-KNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD+V N +IDA + ++ EA ++ EM K++ C P+V YN+LIK CK KR+E E
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
EM Q+ + N +T+ L+ + + V ++M +G TYN++L
Sbjct: 378 VFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
N + +E M+K+ M D +YT MI L G++ED F + LKG+ P
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 501 PRT 503
T
Sbjct: 496 VVT 498
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 185/404 (45%), Gaps = 26/404 (6%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + + E + + + M PDLV TYG ++N
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV---TYGAVINGLCKRG 229
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMN 261
+ A+ + ++ ++ D+ + ++ LC+YKH++ A + F + E D+ T N
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE- 320
+++ C G +A R D+++ PD V + ++A K+GKL A +L+ M +
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
K PDVV N +I C KR+ E +EV REM RG + N TY +LI + + +
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
+M P+ +T+N LL L E V E M++ K+ TY +
Sbjct: 410 AQMVFKQMVSD--GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 438 LKLYVNWDCEDKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++ KV W+ + KG+ P+ +YT M+ G KG E+A + F EM+
Sbjct: 468 IEALCK---AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 495 KGMVPEPRTGILVNDMNIKLKERGEQGKK--VIKLTSLGLKGNA 536
G P P +G + +L++ E + ++ S G G+A
Sbjct: 525 DG--PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDA 566
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 164/355 (46%), Gaps = 14/355 (3%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
F+ +L + + +F +I + ++M +L N TY I +N + + A+ + +
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G + +LL C + A + + E GY D T +++G
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVD-QMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR-KPDVVTCNC 332
EA + ++ C+PD VTY +N L K+G+ AL L M EKG+ + DVV N
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYNT 255
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
IID LC K + +A ++ +M+ +G P+V TYN LI LC R L +M +KN
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 393 GSCLPNEITFNYLLKSLKKP----EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
+ P+ + FN L+ + K E E ++ C YN ++K + + +
Sbjct: 316 IN--PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + EM ++G+ + +YT +IHG + ++A F +M G+ P+ T
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 5/232 (2%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + D++KS+ P V ++ ++A+ K K + L + M G ++ T + I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C + ++ AL +L +M G P++ T NSL+ C R+ +D+M +
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
P+ +TF L+ L K E ++ERM GC+ TY ++ D
Sbjct: 178 --PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +MEK + D Y +I GL ++DA F++M KG+ P+ T
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 168/355 (47%), Gaps = 20/355 (5%)
Query: 163 LDVLGRARRFVEL----IQVFDEMPDLVNEKTYGILLNRYAAAHMVEE-AIGVF-DRRKE 216
LD+ R R +L + +F + +T+ IL R+AA+ + A+ +F +
Sbjct: 104 LDLSARLRHPRQLTNSILALFPRLRLPFTPRTFPILFERFAASQRRPDIAVRLFLSLHRS 163
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEA 276
DL F +LL L + +H A + + + F D+ T N + +GWC + + A
Sbjct: 164 HRVAQDLPLFNSLLDALGKSRHASKAASLVRALERRFPPDVVTYNTLADGWCRVKDTSRA 223
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR-----KPDVVTCN 331
+ + +S P TY + + G+L A F M ++G KPDVV+
Sbjct: 224 LDLLRQMAESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYT 283
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
II L ++ +A ++ EM GC P + TYN+LI+ +CK +E D+M +K
Sbjct: 284 TIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRK 343
Query: 392 NGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
+ +PN +T+ L++ L K + ++ERM+ GC+ TYNV+++ D
Sbjct: 344 D--YIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMD 401
Query: 449 KVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLED---ALSYFHEMRLKGMVP 499
K H +E M K + P+Q +Y ++I ++ + R ED A EM +G +P
Sbjct: 402 KALHLFERMSKGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMVMEMVERGYLP 456
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 143/307 (46%), Gaps = 22/307 (7%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRAR---RFVELIQVFDEM--PDLVNEKTY 191
+ A F + R + +FN++LD LG++R + L++ + PD+V TY
Sbjct: 151 DIAVRLFLSLHRSHRVAQDLPLFNSLLDALGKSRHASKAASLVRALERRFPPDVV---TY 207
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF----- 246
L + + A+ + + E G + + +L R ++ A FF
Sbjct: 208 NTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKK 267
Query: 247 -ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
S+ D+ + I++G V G + +A++ + ++ K C P TY + + KK
Sbjct: 268 RGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKK 327
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G + A+ +F M K P+VVT +I LC +I A++++ MKN GC P V TY
Sbjct: 328 GNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTY 387
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVP----WV 418
N LI++ + M+ + M K CLPN+ T+N ++ ++ K+ E++ V
Sbjct: 388 NVLIRYSFEEGEMDKALHLFERMS-KGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMV 446
Query: 419 LERMERN 425
+E +ER
Sbjct: 447 MEMVERG 453
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 122/239 (51%), Gaps = 15/239 (6%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D + + ++AL K A L +A+ E+ PDVVT N + D C K AL++L
Sbjct: 169 DLPLFNSLLDALGKSRHASKAASLVRAL-ERRFPPDVVTYNTLADGWCRVKDTSRALDLL 227
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ---KNGSCLPNEITFNYLLK 407
R+M G P TTYN ++K + +++ + + +M++ K+ +C P+ +++ ++
Sbjct: 228 RQMAESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIH 287
Query: 408 SLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVN-WDCEDKVRHTWEEMEKKGMG 463
L + ++ + + M + GC + TYN ++++ + ED V +++M +K
Sbjct: 288 GLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAV-TVFDDMIRKDYI 346
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
P+ +YTV+I GL G+++ A+ M+ +G P +V N+ ++ E+G+
Sbjct: 347 PNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEP------VVQTYNVLIRYSFEEGE 399
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 180/376 (47%), Gaps = 16/376 (4%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTY 191
+AY F + + SP + A++ L + R +E ++F EM PD E TY
Sbjct: 276 SAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD---EVTY 331
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEK 250
L++ Y ++EA + ++ + G ++ + L LC+ V+ A E E +
Sbjct: 332 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 391
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+I T N ++NG C GN+ +A + KD+ + PD+VTY T ++A K ++
Sbjct: 392 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 451
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L + M ++ +P VVT N +++ C + + ++L+ M +G +PN TTYNSLIK
Sbjct: 452 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 511
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PWVLER-MERNGC 427
C M E M K +P+ T+N L+K K + W L R M G
Sbjct: 512 QYCIRNNMRATTEIYRGMCAK--GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF 569
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
++ +YN ++K + + R +E+M ++G+ D+ Y + YD+G++E L
Sbjct: 570 NLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLE 629
Query: 488 YFHEMRLKGMVPEPRT 503
E K +V + +T
Sbjct: 630 LCDEAIEKCLVGDIQT 645
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 182/427 (42%), Gaps = 34/427 (7%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+ + L E D ++ V+ + D+ +FF+W D S + A + +
Sbjct: 81 LRRVLKPYESKFRADHLIWVLMNIKNDYRLVLSFFEWACLRRDPSLEARCIVAQIATASK 140
Query: 169 ARRFV-ELIQVFDEMPDL---------VNEK--TYGILLNRYAA----AHMVEEAIGV-- 210
+ +LIQ F P+L + +K YG+L++ + +H+ E+ G+
Sbjct: 141 DLKMARKLIQDFWVNPNLDVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKI 200
Query: 211 ----------FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKT 259
+ + G + + ++L LC+ V AE +E D
Sbjct: 201 ALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 260
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
+++G+C LGNV A R + ++ K K PD +TY + L + G++ A +LF M
Sbjct: 261 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 320
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
K +PD VT +ID C + ++ EA + +M G PN+ TY +L LCK ++
Sbjct: 321 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 380
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNV 436
T E L EM +K N T+N L+ L K ++ +++ ME G TY
Sbjct: 381 TANELLHEMCRKGLEL--NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 438
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ Y + +M + + P ++ V+++G G LED M KG
Sbjct: 439 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 498
Query: 497 MVPEPRT 503
++P T
Sbjct: 499 IMPNATT 505
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 149/337 (44%), Gaps = 9/337 (2%)
Query: 171 RFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+ +E +Q+ P N TY ++ V EA V G D + L+
Sbjct: 209 KLIEEMQIKGLKP---NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLI 265
Query: 231 LWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
C+ +V A F E +K + D T ++ G C G V EA + + +++ + E
Sbjct: 266 DGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLE 325
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD VTY ++ K+GK+ A L M + G P++VT + D LC + A E+
Sbjct: 326 PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANEL 385
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
L EM +G N+ TYNSL+ LCK ++ + + +ME P+ +T+ L+ +
Sbjct: 386 LHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH--PDAVTYTTLMDAY 443
Query: 410 KKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K E+ +L +M + + T+NV++ + + + M +KG+ P+
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+Y +I + + + M KG+VP+ T
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNT 540
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 114/258 (44%), Gaps = 34/258 (13%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N ++ C G V EA+R +++I PD V Y T ++ K G + +A RLF M
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
++ PD +T +I LC R+ EA ++ EM + P+ TY +LI CK +M
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVIL 438
+ + ++M Q + PN +T+ L L K EV DT N +L
Sbjct: 345 KEAFSLHNQMLQMGLT--PNIVTYTALADGLCKCGEV----------------DTANELL 386
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
EM +KG+ + +Y +++GL G ++ A+ +M + G
Sbjct: 387 ----------------HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 430
Query: 499 PEPRTGILVNDMNIKLKE 516
P+ T + D K +E
Sbjct: 431 PDAVTYTTLMDAYCKSRE 448
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 34/225 (15%)
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
L+L + M KG KP+ T N +I LC ++ EA VLREM + G P+ Y +LI
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMS 430
CK+ + + Y DEM+++ S P+ IT+ ++ L + V ME
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKRKIS--PDFITYTAVICGLCQTGRV------ME------- 311
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
DK+ H EM K + PD+ +YT +I G +G++++A S +
Sbjct: 312 ----------------ADKLFH---EMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHN 352
Query: 491 EMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
+M G+ P T + D K E + + ++ GL+ N
Sbjct: 353 QMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 397
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 90/223 (40%), Gaps = 10/223 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P + + ++D ++R V ++ +M P +V T+ +L+N + + M+E
Sbjct: 429 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVV---TFNVLMNGFCMSGMLE 485
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
+ + E G + + + + +L+ C R E + D T NI++
Sbjct: 486 DGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 545
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G C N+ EA +D++ +Y + K+ K A LF+ M +G
Sbjct: 546 KGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLV 605
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
D N D + ++ LE+ E + + ++ T N+
Sbjct: 606 ADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 160/321 (49%), Gaps = 10/321 (3%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
N +Y +L+ A + ++A+G+ + G D+ + L+ LC V+ A E
Sbjct: 114 NAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELM 173
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E ++ ++ + +L G+C G + + + ++ + EPD V Y +++L K
Sbjct: 174 GEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV 233
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK A + M +G +P+VVT N +I+ +C + + EA+ VL++M +G P+V TY
Sbjct: 234 GKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTY 293
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
N+LIK L + M+ L+EM + PN +TFN +++ L + + V M
Sbjct: 294 NTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMM 353
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG---LYDK 479
E GC ++ TYN+++ + K +EM G+ PD +Y+++I G ++
Sbjct: 354 EETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQV 413
Query: 480 GRLEDALSYFHEMRLKGMVPE 500
R ED LS MR +G+ PE
Sbjct: 414 DRAEDLLS---TMRDRGIEPE 431
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 8/243 (3%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDII---KSKCEPDSVTYATFVNALTKKGKLGTAL 312
D + N +L C G+ A + + C P++V+Y + AL A+
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L ++M G + DVVT +I LC + +A+E++ EM G PNV Y+SL++
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
CK R E V + EM +K P+ + + L+ SL K ++ V++ M R G +
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIE--PDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ TYNV++ + ++M +KG+ PD +Y +I GL D +++A+
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 490 HEM 492
EM
Sbjct: 314 EEM 316
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 153/355 (43%), Gaps = 44/355 (12%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N Y LL Y + E+ VF E G D+ + L+ LC+ + A
Sbjct: 184 NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 243
Query: 247 ESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ + ++ T N+++N C G+V EA K + + PD VTY T + L+
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV 303
Query: 306 GKLGTALRLFQAMWEKGR---KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
++ A+ L + M +G+ KP+VVT N +I LC R+ +A +V M+ GC+ N+
Sbjct: 304 LEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNL 362
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK----------- 411
TYN LI L ++ ++ E +DEM P+ T++ L+K K
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLE--PDSFTYSILIKGFCKMWQVDRAEDLL 420
Query: 412 ---------PE---EVPWVLERMERNGCKMSTDTYN----------VILKLYVNWDCEDK 449
PE +P ++ E+ + + + +N V ++ C+
Sbjct: 421 STMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAG 480
Query: 450 VRHTWEEMEK----KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
T +E+ K +G+ PD +Y+++I+ G +E A +M G +P+
Sbjct: 481 DLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPD 535
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 157/382 (41%), Gaps = 39/382 (10%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
WE F +S +G P ++ ++D L + + + V D M P++V
Sbjct: 201 WEDVGKVFVEMSEKG-IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVV--- 256
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY +L+N V+EAIGV + E G D+ + L+ L ++ A E
Sbjct: 257 TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM 316
Query: 249 --EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
KN ++ T N ++ G C +G + +A + + ++ C + VTY + L +
Sbjct: 317 VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVH 376
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
K+ A+ L M G +PD T + +I C ++ A ++L M++RG P + Y
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQK------------NGSCLPNEI-TFNYLLKSLKKPE 413
L+ +C+ ME +EM+ +G+C ++ T LLKS+
Sbjct: 437 PLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG 496
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
P + TY++++ ++ + ++M G PD + +I
Sbjct: 497 LTPDAV-------------TYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543
Query: 474 HGLYDKGRLEDALSYFHEMRLK 495
G KG + L EM K
Sbjct: 544 QGYSTKGEINKVLELIREMITK 565
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 8/219 (3%)
Query: 291 DSVTYATFVNALTKKG---KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
D+V+Y T + AL ++G + G LR +P+ V+ ++ ALC + +A+
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+LR M++ G +V TY +LI+ LC ++ E + EM + PN + ++ LL+
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIE--PNVVVYSSLLQ 193
Query: 408 SLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
K E+V V M G + Y ++ K + M ++G+ P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +Y V+I+ + +G +++A+ +M KG+ P+ T
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 189/449 (42%), Gaps = 98/449 (21%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R+ D P FN IL L R F+ + V+++M PD+V TYGIL++
Sbjct: 155 RDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVV---TYGILIHGLCKT 211
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTM 260
++A+ +FD + G L + + +L LC+ K + A+ F + + D+ T
Sbjct: 212 CKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITY 271
Query: 261 NIILNGWC--------------------VLG---------NVYEAKRF------WKDIIK 285
N++LNG+C +LG ++ A+R+ ++ +++
Sbjct: 272 NVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+PD + Y + L+++G++ AL L M E+G +PD + N +I C + E
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A + E+ C PN TY+ LI +CK + EME+ CLP+ +TFN L
Sbjct: 392 AESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLG--CLPSVVTFNSL 449
Query: 406 LKSLKKPEEV---------------PWVLER-----------------MER--------- 424
+ L K + P + R MER
Sbjct: 450 INGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILK 509
Query: 425 ----------NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+G TYN+++ + + + ++EM+ KG PD +Y +I
Sbjct: 510 AYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLID 569
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
GLY GR EDAL F +M KG VPE T
Sbjct: 570 GLYRAGRNEDALEIFEQMVKKGCVPESST 598
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 174/386 (45%), Gaps = 40/386 (10%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+T + ++++G + G + +++ L RARR+ E + +M PD++ Y
Sbjct: 287 AFTLLQLLTKDG-HILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVM---LYT 342
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF-FESEKN 251
I++ + V EA+ + E G D + L+ C +++ AE+ E K+
Sbjct: 343 IMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKH 402
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ + T +I++ G C G + +A+ +K++ K C P VT+ + +N L K +L A
Sbjct: 403 DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462
Query: 312 LRLFQAMWEKGRKP--------------DVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
LF M E RKP D+ + +++ LC I +A ++L ++ + G
Sbjct: 463 RLLFYQM-EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSG 521
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EE 414
LP++ TYN LI CK + ++ EM+ K +P+ +T+ L+ L + E+
Sbjct: 522 VLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGH--MPDSVTYGTLIDGLYRAGRNED 579
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK----VRHTWEEMEKKGMGPDQRSYT 470
+ E+M + GC + TY I+ W C + W + + G +
Sbjct: 580 ALEIFEQMVKKGCVPESSTYKTIM----TWSCRENNISLALSVWMKYLRDFRGWEDEKVR 635
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKG 496
V+ +D L+ A+ EM +K
Sbjct: 636 VVAES-FDNEELQTAIRRLLEMDIKS 660
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 45/284 (15%)
Query: 258 KTMNIILNGWCVLGNVYEAKRFWK---DIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
+T+ ++ G + N +E +WK ++ S + S ++ + A ++ G A+
Sbjct: 93 RTVQDLIIGKLIKENAFEL--YWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVES 150
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M + KPD+ N I+ L K+ AL V +M P+V TY LI LCK
Sbjct: 151 FSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCK 210
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMST 431
+ + DEM + LPN+I ++ +L L KK + + +M +GC
Sbjct: 211 TCKTQDALVLFDEMTDRG--ILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDL 268
Query: 432 DTYNVILKLY-------------------------VNWDC---------EDKVRHTW-EE 456
TYNV+L + + + C + H W ++
Sbjct: 269 ITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQK 328
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
M ++ + PD YT+MI GL +GR+ +AL+ EM +G+ P+
Sbjct: 329 MLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPD 372
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 102/234 (43%), Gaps = 6/234 (2%)
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKE 216
N F ++ G + F E+ Q+ MPD V TYG L++ A E+A+ +F++ +
Sbjct: 534 NGFCKFGNINGAFKLFKEM-QLKGHMPDSV---TYGTLIDGLYRAGRNEDALEIFEQMVK 589
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF-GYDIKTMNIILNGWCVLGNVYE 275
G + + S ++ ++ W CR ++ +A + + +F G++ + + ++ +
Sbjct: 590 KGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTA 649
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
+R + IKSK D Y F+ L + + A +F + + +C +I
Sbjct: 650 IRRLLEMDIKSK-NFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIG 708
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
LC + + A++V RG N L+ +L + R + + ME
Sbjct: 709 RLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLANRME 762
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 161/367 (43%), Gaps = 22/367 (5%)
Query: 149 EGDYSPGSNV----FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRY 198
E PGS + + +L L RA R+ +++F E+ P LV TY ++L+ Y
Sbjct: 163 ETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLV---TYNVVLDVY 219
Query: 199 A-AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD- 256
+ + D + G D ++ CR V+ A FFE K G+
Sbjct: 220 GRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKAR-GHAP 278
Query: 257 -IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
+ T N +L + GN EA R ++ ++ C+PD+VTY + G A R
Sbjct: 279 CVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCL 338
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M KG P+ T N ++ A ++ EAL + +MK G +PNV TYN ++ L K
Sbjct: 339 DTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKK 398
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTD 432
R + E L EM + C PN +T+N +L K + V VLE M G ++S D
Sbjct: 399 SRFTVMLEMLGEMSRSG--CTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRD 456
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TYN ++ Y + EM G P +Y +++ L +G A S +M
Sbjct: 457 TYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKM 516
Query: 493 RLKGMVP 499
R KG P
Sbjct: 517 RTKGFKP 523
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 12/245 (4%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI-PEALEV 349
D Y T ++AL++ G+ AL LF + +G P +VT N ++D R P + +
Sbjct: 173 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVAL 232
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
L EM+ G P+ T +++I C+ ++ + ++++ + + P +T+N LL+
Sbjct: 233 LDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHA--PCVVTYNALLQVF 290
Query: 410 KKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K E VL ME+NGC+ TYN + Y ++ + M KG+ P+
Sbjct: 291 GKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNA 350
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK 526
+Y ++ + G++++AL+ F +M+ G VP VN N+ L G++ + +
Sbjct: 351 FTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPN------VNTYNLVLGMLGKKSRFTVM 404
Query: 527 LTSLG 531
L LG
Sbjct: 405 LEMLG 409
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 170/406 (41%), Gaps = 29/406 (7%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A FF+ + G ++P +NA+L V G+A + E ++V EM PD V TY
Sbjct: 264 AVAFFEDLKARG-HAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAV---TYN 319
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKN 251
L YA A EEA D G L + + ++ V+ A F+ +K
Sbjct: 320 ELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKT 379
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRF------WKDIIKSKCEPDSVTYATFVNALTKK 305
F ++ T N+ VLG + + RF ++ +S C P+ VT+ T + K+
Sbjct: 380 GFVPNVNTYNL------VLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKR 433
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G R+ + M G + T N +I A A ++ EM + G P +TTY
Sbjct: 434 GMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTY 493
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE-RMER 424
N+L+ L + T + +M K PNE +++ LL+ K V + E
Sbjct: 494 NALLNVLSRQGDWSTAQSIVSKMRTKGFK--PNEQSYSLLLQCYAKGGNVAGIAAIENEV 551
Query: 425 NGCKMSTDTYNVILKLYV-NWDCE--DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
G ++ ++ L + N+ C D + ++E++ +G PD + M+ G
Sbjct: 552 YGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGM 611
Query: 482 LEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKL 527
A F ++ G+ P+ T + DM K E E K + +L
Sbjct: 612 YSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQL 657
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 55/374 (14%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRY 198
A F + + G + P N +N +L +LG+ RF ++++ EM G NR
Sbjct: 369 ALALFDQMKKTG-FVPNVNTYNLVLGMLGKKSRFTVMLEMLGEM------SRSGCTPNRV 421
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK 258
N +L +C + +E T G ++
Sbjct: 422 T---------------------------WNTMLAVCGKRGMEDYVTRVLEGMRSCGVELS 454
Query: 259 --TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
T N ++ + G+ A + + ++ + P TY +N L+++G TA +
Sbjct: 455 RDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVS 514
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL-PNVTTYNSLIKHLCKI 375
M KG KP+ + + ++ + + E+ G + P+ +L+ K
Sbjct: 515 KMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKC 574
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTD 432
+R++ + E++ + + P+ + FN +L K + V + ++R+G
Sbjct: 575 RRLDGMETAFQEVKARGYN--PDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLI 632
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEME-------KKGMGPDQRSYTVMIHGLYDKGRLEDA 485
TYN ++ +Y K +WE + + M PD SY +I+G +G +++A
Sbjct: 633 TYNSLMDMYA------KCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEA 686
Query: 486 LSYFHEMRLKGMVP 499
EM GM P
Sbjct: 687 QRVLSEMVADGMAP 700
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 130/330 (39%), Gaps = 50/330 (15%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYR--FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVL 166
+ + + C + L+ D +I Y A+ + ++ G ++P +NA+L+VL
Sbjct: 442 VLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAG-FTPCITTYNALLNVL 500
Query: 167 GR------ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV---------- 210
R A+ V ++ P NE++Y +LL YA V +
Sbjct: 501 SRQGDWSTAQSIVSKMRTKGFKP---NEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAV 557
Query: 211 --------------------------FDRRKEFGELDDLSAFQNLL-LWLCRYKHVEVAE 243
F K G DL F ++L ++ + + E
Sbjct: 558 FPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATE 617
Query: 244 TFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC-EPDSVTYATFVNAL 302
F +++ D+ T N +++ + +EA++ + S+ +PD V+Y T +N
Sbjct: 618 VFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGF 677
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K+G + A R+ M G P VT + ++ + EA EV+ M G P
Sbjct: 678 CKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPME 737
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
TY +++ C+ KR E +L E+ + +
Sbjct: 738 LTYRRVVESYCRAKRFEEARGFLSEVSETD 767
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 180/376 (47%), Gaps = 16/376 (4%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTY 191
+AY F + + SP + A++ L + R +E ++F EM PD E TY
Sbjct: 376 SAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD---EVTY 431
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEK 250
L++ Y ++EA + ++ + G ++ + L LC+ V+ A E E +
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+I T N ++NG C GN+ +A + KD+ + PD+VTY T ++A K ++
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 551
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L + M ++ +P VVT N +++ C + + ++L+ M +G +PN TTYNSLIK
Sbjct: 552 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 611
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PWVLER-MERNGC 427
C M E M K +P+ T+N L+K K + W L R M G
Sbjct: 612 QYCIRNNMRATTEIYRGMCAK--GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF 669
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
++ +YN ++K + + R +E+M ++G+ D+ Y + YD+G++E L
Sbjct: 670 NLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLE 729
Query: 488 YFHEMRLKGMVPEPRT 503
E K +V + +T
Sbjct: 730 LCDEAIEKCLVGDIQT 745
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 184/419 (43%), Gaps = 35/419 (8%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+ + L E D ++ V+ + D+ +FF+W D S + A + +
Sbjct: 81 LRRVLKPYESKFRADHLIWVLMNIKNDYRLVLSFFEWACLRRDPSLEARCIVAQIATASK 140
Query: 169 ARRFV-ELIQVFDEMPDL---------------------VNEKTYGILLNRYAAAHMVEE 206
+ +LIQ F P+L + + + I A M++E
Sbjct: 141 DLKMARKLIQDFWVNPNLDVGVSFGHFVEQLIYTYKDWGSDPRVFDIFFQVLVEAGMLDE 200
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCR-YKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
A +FD+ +G L + + + L +++A + F E + ++ + NII
Sbjct: 201 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIIT 260
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ C LG V EA + + C PD ++Y+T +N + G+L L+L + M KG K
Sbjct: 261 HSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLK 320
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+ T N +I LC ++ EA VLREM + G P+ Y +LI CK+ + + Y
Sbjct: 321 PNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRL 380
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK-MSTD--TYNVILKLY 441
DEM+++ S P+ IT+ ++ L + V + CK + D TY ++ Y
Sbjct: 381 FDEMQKRKIS--PDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 438
Query: 442 VNWDCEDKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
E K++ + +M + G+ P+ +YT + GL G ++ A HEM KG+
Sbjct: 439 CK---EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 494
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 155/354 (43%), Gaps = 11/354 (3%)
Query: 156 SNVFNAILDV--LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
S V N V L R + +E +Q+ P N TY ++ V EA V
Sbjct: 292 STVINGYCQVGELQRVLKLIEEMQIKGLKP---NPYTYNGVILLLCKTGKVAEAERVLRE 348
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGN 272
G D + L+ C+ +V A F E +K + D T ++ G C G
Sbjct: 349 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR 408
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
V EA + + +++ + EPD VTY ++ K+GK+ A L M + G P++VT
Sbjct: 409 VMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTA 468
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+ D LC + A E+L EM +G N+ TYNSL+ LCK ++ + + +ME
Sbjct: 469 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 528
Query: 393 GSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
P+ +T+ L+ + K E+ +L +M + + T+NV++ + +
Sbjct: 529 FH--PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLED 586
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ M +KG+ P+ +Y +I + + + M KG+VP+ T
Sbjct: 587 GEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNT 640
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 35/211 (16%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK-KRIPEALEV 349
D + F L + G L A +LF M G V +CN I L I AL+V
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKV 240
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
E G N +YN + LC++ R+ ++ L +ME + C+P+ I
Sbjct: 241 FVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELR--GCIPDVI--------- 289
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+Y+ ++ Y +V EEM+ KG+ P+ +Y
Sbjct: 290 -----------------------SYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTY 326
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+I L G++ +A EM +G+ P+
Sbjct: 327 NGVILLLCKTGKVAEAERVLREMISEGIAPD 357
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 89/220 (40%), Gaps = 4/220 (1%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAI 208
+ P + + ++D ++R V ++ +M D + T + +L+N + + M+E+
Sbjct: 529 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 588
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
+ E G + + + + +L+ C R E + D T NI++ G
Sbjct: 589 KLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGH 648
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C N+ EA +D++ +Y + K+ K A LF+ M +G D
Sbjct: 649 CKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADR 708
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
N D + ++ LE+ E + + ++ T N+
Sbjct: 709 EIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 33/161 (20%)
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ EA ++ +M N G L +V + N I HL E LD ++
Sbjct: 198 LDEARKLFDKMLNYGLLISVDSCNLFISHLS---------EDLDGIK------------- 235
Query: 403 NYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+LK E P V G +T +YN+I + +ME +G
Sbjct: 236 ----IALKVFVEFPEV-------GVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGC 284
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
PD SY+ +I+G G L+ L EM++KG+ P P T
Sbjct: 285 IPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYT 325
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 193/427 (45%), Gaps = 7/427 (1%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
IL+ + + +E++ L+ D V+ R R A F+ W + +S
Sbjct: 38 ILEDKASDVQALLERSHAAVSTKLSRDTFGGVLGRLRCTCNA-LGFYHWAATRPGFSHTL 96
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKE 216
N++L L R + + F N ++ ILL +AA E + K
Sbjct: 97 FTRNSLLLALVRGGHLSDALGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKS 156
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYE 275
G + + +L LC + ++ A ++F S N+ + T ++++G C V
Sbjct: 157 RGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVER 216
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A ++++I+ +PD + Y++ ++ L+K G++ A +L M +G P V I+
Sbjct: 217 ACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVA 276
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
LC RI EA++ ++EM+ R P V TY+ ++ + ++E + ++EM ++ C
Sbjct: 277 GLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRD--C 334
Query: 396 LPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+ I++ ++ S+ + EE V E M GCK TY +I+ + H
Sbjct: 335 APDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATH 394
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNI 512
M+K + P++ YT+++ G RLE+AL + + G++P T V +
Sbjct: 395 VLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALC 454
Query: 513 KLKERGE 519
KLK+ E
Sbjct: 455 KLKKMDE 461
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 185/431 (42%), Gaps = 58/431 (13%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV 186
R D + A ++F VS P + ++D L +A + VF+EM PD++
Sbjct: 176 RRDLDKAVSYFNSVS-PNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDII 234
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETF 245
Y L++ + A V+EA + D G A+ +++ LC+ + E +T
Sbjct: 235 ---AYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTI 291
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E + + T + I+ G+ +G V +A +++ C PD+++Y F+ AL
Sbjct: 292 QEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSI 351
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC--------------------------- 338
G+ A ++F+ M EKG KPD+ T IID C
Sbjct: 352 GRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIY 411
Query: 339 ------FKK--RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
F K R+ EALE+ + + G LP+ TYN++I LCK+K+M+ E L EM++
Sbjct: 412 TMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQR 471
Query: 391 KNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ P+ +T++ ++ L K E +L M NG TY +++
Sbjct: 472 RKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKV 531
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
+ EEM K G+ PD +Y ++ L + ++ A EM G P
Sbjct: 532 SRAMELLEEMLKAGIFPDDHTYGTLVQILC-RSDVDAAWDLLQEMMRNGHTP-------- 582
Query: 508 NDMNIKLKERG 518
N+ K E+G
Sbjct: 583 NEFTFKAVEKG 593
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 157/323 (48%), Gaps = 13/323 (4%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRF 279
D S ++ LC++K VA F E G +K N++++G+ + NV A
Sbjct: 753 DDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNL 812
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
++++ + C PD+ TY + ++A K GK+ L+ M +G KP+ +T N +I L
Sbjct: 813 FEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVK 872
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
R+ +A+++ + + P T+ LI L K R++ +E D M C PN
Sbjct: 873 SNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHY--GCRPNS 930
Query: 400 ITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
+N L+ K V E RM + G + +Y +++ + D H +E+
Sbjct: 931 AIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEK 990
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKE 516
+++ G+ PD +Y +MI+GL R E+ALS FHEM+ +G+VP+ T N + + L
Sbjct: 991 LKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYT---YNSLILNLGI 1047
Query: 517 RG---EQGKKVIKLTSLGLKGNA 536
G E GK +L +GLK N
Sbjct: 1048 VGMIEEAGKIYEELQFIGLKPNV 1070
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 158/312 (50%), Gaps = 24/312 (7%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A+ F+ + G +P + +N+++D G++ + EL ++DEM P N T
Sbjct: 807 EVAWNLFEEMKSAG-CAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKP---NTIT 862
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y ++++ ++ +++A+ ++ F L+ L + ++ A F+
Sbjct: 863 YNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMV 922
Query: 251 NEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ +G + NI++NG+ LG+V A F+K ++K PD +Y V+ L G++
Sbjct: 923 H-YGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRV 981
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL F+ + + G PD+V N +I+ L +R EAL + EM+NRG +P++ TYNSL
Sbjct: 982 DDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSL 1041
Query: 369 IKHLCKIKRME---TVYEYLDEMEQKNGSCLPNEITFNYLLK--SLKKPEEVPW-VLERM 422
I +L + +E +YE L + K PN T+N L++ +L E+ + + ++M
Sbjct: 1042 ILNLGIVGMIEEAGKIYEELQFIGLK-----PNVFTYNALIRGYTLSGNSELAYGIYKKM 1096
Query: 423 ERNGCKMSTDTY 434
GC +T T+
Sbjct: 1097 MVGGCDPNTGTF 1108
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 172/418 (41%), Gaps = 52/418 (12%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
RE + + +N ++ L ++ E ++V+ M P L KT+ L+
Sbjct: 186 REAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSL---KTFSALMVASGKR 242
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTM 260
++ +G+ + + G ++ + + L R ++ A + + + G D+ T
Sbjct: 243 RNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTY 302
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
++++ C + +A + + S +PD VTY T ++ + G L +++ M
Sbjct: 303 TVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEA 362
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G PDVVT +++ALC RI EA ++L M+ +G LPN+ TYN+LI L + R++
Sbjct: 363 DGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDD 422
Query: 381 VYEYLDEMEQ------------------KNG---------------SCLPNEITFN---Y 404
+ ME K+G PN + N Y
Sbjct: 423 ALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLY 482
Query: 405 LLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
L + + E + ++ +G + TYN+++K Y D+ EM K P
Sbjct: 483 SLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEP 542
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
D +I LY GR+E+A F M + P T NI L G++G+
Sbjct: 543 DVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVT------YNILLAGLGKEGQ 594
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 135/278 (48%), Gaps = 9/278 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGV 210
P + +N ++ L RA R + + +F M L E T Y +L++ + + +A+
Sbjct: 402 PNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALET 461
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCV 269
F++ K G ++ A L L + A+ F E + + D T N+++ +
Sbjct: 462 FEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSK 521
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+G V EA + ++ K +CEPD + + ++ L K G++ A ++F M E P VVT
Sbjct: 522 VGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVT 581
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N ++ L + +I +A+++ M GC PN T+N+L+ LCK ++ + +M
Sbjct: 582 YNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMT 641
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMER 424
N C P+ +TFN ++ K ++ W+ +M++
Sbjct: 642 TMN--CRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKK 677
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 173/407 (42%), Gaps = 50/407 (12%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILL 195
A +FK V + + N +L++L RR ++ VFD M + N TY I+
Sbjct: 107 ALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIF 166
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+ +A ++ +E G + + ++ L+ +L +
Sbjct: 167 KSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQ-------------------- 206
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
+G+C EA ++ ++ +P T++ + A K+ + T + L
Sbjct: 207 ---------SGFC-----KEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLL 252
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ M G +P++ T I L +I EA +++ M + GC P+V TY LI LC
Sbjct: 253 EEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTA 312
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYN 435
++++ +M K+ S P+++T+ LL L+++E+ +M D Y
Sbjct: 313 RKLDDAMCLFTKM--KSSSHKPDKVTYVTLLDKFSDCGH----LDKVEKIWTEMEADGYA 366
Query: 436 ---VILKLYVNWDCE----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
V + VN C+ ++ + M K+G+ P+ +Y +I GL RL+DAL
Sbjct: 367 PDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDL 426
Query: 489 FHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
F M G+ P T IL+ D + K G+ + K+ + G+ N
Sbjct: 427 FSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPN 473
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 149/310 (48%), Gaps = 10/310 (3%)
Query: 202 HMVEEAIGVFDRRKEFGELDDL---SAFQNLLLWLCR-YKHVE-VAETFFESEKNEFGYD 256
H + + I K GEL ++ + N +L + R ++ VE +A F ++ +
Sbjct: 99 HSISDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRN 158
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ T II + G + +A + + ++ ++ +Y ++ L + G AL +++
Sbjct: 159 VDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYR 218
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M +G KP + T + ++ A ++ I + +L EM++ G PN+ TY I+ L +
Sbjct: 219 RMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDG 278
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDT 433
+++ Y + M+ + C P+ +T+ L+ +L +K ++ + +M+ + K T
Sbjct: 279 KIDEAYRIMKRMD--DDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVT 336
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y +L + + DKV W EME G PD ++T++++ L GR+ +A MR
Sbjct: 337 YVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMR 396
Query: 494 LKGMVPEPRT 503
+G++P T
Sbjct: 397 KQGVLPNLHT 406
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 8/255 (3%)
Query: 119 TLTDDLIV-NVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
T+T ++++ N++ R D +A ++ VS GD+SP F ++D L ++ R + +
Sbjct: 860 TITYNMVISNLVKSNRLD-KAMDLYYNLVS--GDFSPTPCTFGPLIDGLLKSGRLDDAHE 916
Query: 178 VFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
+FD M N Y IL+N Y V+ A F R + G DL ++ L+ LC
Sbjct: 917 MFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILC 976
Query: 235 RYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
V+ A +FE K D+ N+++NG EA + ++ PD
Sbjct: 977 IAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLY 1036
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY + + L G + A ++++ + G KP+V T N +I A + ++M
Sbjct: 1037 TYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKM 1096
Query: 354 KNRGCLPNVTTYNSL 368
GC PN T+ L
Sbjct: 1097 MVGGCDPNTGTFAQL 1111
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+ A FFK + +EG P + ++D+L A R + + F+++ PDLV
Sbjct: 947 DTACEFFKRMVKEG-IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLV---A 1002
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y +++N + EEA+ +F + G + DL + +L+L L +E A +E E
Sbjct: 1003 YNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYE-EL 1061
Query: 251 NEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
G ++ T N ++ G+ + GN A +K ++ C+P++ T+A N
Sbjct: 1062 QFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113
>gi|224110770|ref|XP_002315631.1| predicted protein [Populus trichocarpa]
gi|222864671|gb|EEF01802.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 196/414 (47%), Gaps = 9/414 (2%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
+ +++DL+ ++ R++ DW++A F+W Y ++ ++D+LG+ ++ ++ +
Sbjct: 36 IEVSNDLVDKLLLRFKDDWKSALGVFRWAGLRPGYKHRPEAYDMMVDILGKMKQMDQMRE 95
Query: 178 VFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+ +EM LV T G + R++ A E+A+ +FD FG + + LL LC+
Sbjct: 96 LLEEMNRNHLVTLNTVGKAMRRFSGAGKWEDAVRMFDELGTFGLEKNAESMNLLLDTLCK 155
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
VE A F K+ + T NI ++GWC V EA +++ P ++Y
Sbjct: 156 EGKVEQARAIFLELKSHILPNAHTFNIFIHGWCKANLVDEAHWTLQEMKGHAFRPCVISY 215
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+T + ++ L M +G P+VVT II L + EAL++ + MK+
Sbjct: 216 STIILFYCRQHNFSKVYELLDEMEAQGCPPNVVTYTTIIVFLAKSQNTEEALQLTQRMKS 275
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
GC P+ +NSLI L + R + + E E N + T+N ++ L V
Sbjct: 276 AGCKPDTPFFNSLIYILGRAGRFQEAVDVF-EKEMPNAGVSRDTSTYNSMIAMLCHHGHV 334
Query: 416 P---WVLERMERNGC-KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG-MGPDQRSYT 470
+L ME + K+ T+ +LK + + + ++M KK + D+ +Y
Sbjct: 335 SKALSLLREMETSAPFKLDGQTFYPLLKSCLRTGDMNLLSQLLDDMVKKHQLSLDRSAYA 394
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKV 524
++IHGL + + A F EM K +VP+ +T ++ + +KLK + +K+
Sbjct: 395 LLIHGLCRANKCQWAYHLFEEMISKDIVPKYQTCHMLLE-EVKLKSMYDTAEKI 447
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 174/379 (45%), Gaps = 19/379 (5%)
Query: 150 GDYSPGSNVFNAILD------VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHM 203
G + P +N+I+D ++ A R ++ PD E TY L+N +
Sbjct: 289 GGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPD---EFTYCSLINGFCKDGD 345
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNI 262
+ A+ VF G + + L+ L + + A + E +N +I T N+
Sbjct: 346 PDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNL 405
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++NG C +G V +A D I C PD TY T ++ K+ KL +A + MW +G
Sbjct: 406 VINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQG 465
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDV+T N +++ LC + E +E+ + M+ +GC PN+ TYN ++ LCK K++
Sbjct: 466 MTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAV 525
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMER--NGCKMSTDTYNVI 437
+ L EM+ K P+ ++F L K ++ + RME+ + C +T TYN+I
Sbjct: 526 DLLGEMKSKGLK--PDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCH-TTATYNII 582
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + + + M+ G PD +Y V+I G G + + E K
Sbjct: 583 VSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRF 642
Query: 498 VPEPRT-GILVNDMNIKLK 515
+P T G ++N + +K K
Sbjct: 643 IPSLTTFGRVLNCLCVKDK 661
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 157/343 (45%), Gaps = 24/343 (6%)
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
++FDEM PD+V + L++ +V E+ + + + G +L F +
Sbjct: 202 ELFDEMLARCLCPDVV---AFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFV 258
Query: 231 LWLCR----------YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
LCR + VE E + F D T N I++G+C G V +A R
Sbjct: 259 QGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVL 318
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
KD + +PD TY + +N K G A+ +F+ KG +P +V N +I L +
Sbjct: 319 KDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQ 378
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
I AL+++ EM GCLPN+ TYN +I LCK+ + +D+ K C P+
Sbjct: 379 GLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAK--GCPPDIF 436
Query: 401 TFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T+N L+ K + ++ RM G TYN +L ++V ++ M
Sbjct: 437 TYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAM 496
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
E+KG P+ +Y +++ L ++ +A+ EM+ KG+ P+
Sbjct: 497 EEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 200/461 (43%), Gaps = 45/461 (9%)
Query: 106 KGEIEKALN--------QCELTL-TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
KG++++A++ C+ ++ + + I+N++ + + +A + R D S
Sbjct: 89 KGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYM----RMRDRGVQS 144
Query: 157 NVFNAILDV--LGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVF 211
+V+ + + + R +++ MP+L N Y ++ + + A +F
Sbjct: 145 DVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELF 204
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-------KNEFGYDIKTMNIIL 264
D D+ AF L+ LC+ V FESE K ++ T NI +
Sbjct: 205 DEMLARCLCPDVVAFNKLVHVLCKKGLV------FESERLLGKVLKRGVCPNLFTFNIFV 258
Query: 265 NGWCVLG---------NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
G C G V EA+ + + ++ EPD +TY + ++ KKG + A R+
Sbjct: 259 QGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVL 318
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ KG KPD T +I+ C A+ V ++ +G P++ YN+LIK L +
Sbjct: 319 KDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQ 378
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTD 432
+ + ++EM + NG CLPN T+N ++ L K + +++ GC
Sbjct: 379 GLILPALQLMNEMAE-NG-CLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIF 436
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TYN ++ Y D M +GM PD +Y +++GL G+ E+ + F M
Sbjct: 437 TYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAM 496
Query: 493 RLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLK 533
KG P T ++ D K K+ E + ++ S GLK
Sbjct: 497 EEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLK 537
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 165/391 (42%), Gaps = 19/391 (4%)
Query: 126 VNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL 185
V + + + D A F E + ++ + I+ LG F E+ ++ EM +
Sbjct: 10 VAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMREN 69
Query: 186 VN----EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK-HVE 240
VN E Y + Y V+EA+ F+R + + + ++ L + H +
Sbjct: 70 VNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQ 129
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ + D+ T I + +C Y A R +++ + C+ ++V Y T V
Sbjct: 130 AHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVA 189
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L G+ A LF M + PDVV N ++ LC K + E+ +L ++ RG P
Sbjct: 190 GLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCP 249
Query: 361 NVTTYNSLIKHLC---------KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
N+ T+N ++ LC + R+ EYL +M NG P+++T+N ++ K
Sbjct: 250 NLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKM--VNGGFEPDDLTYNSIIDGYCK 307
Query: 412 P---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
++ VL+ G K TY ++ + D+ +++ KG+ P
Sbjct: 308 KGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVL 367
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
Y +I GL +G + AL +EM G +P
Sbjct: 368 YNTLIKGLSQQGLILPALQLMNEMAENGCLP 398
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P +N +L+ L +A + E++++F M P+++ TY I+++ A V E
Sbjct: 467 TPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNII---TYNIIVDSLCKAKKVNE 523
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKTMNIIL 264
A+ + K G D+ +F L C+ ++ A F + ++ + T NII+
Sbjct: 524 AVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIV 583
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ + N+ A + + + S C+PD+ TY ++ K G + + EK
Sbjct: 584 SAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFI 643
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
P + T +++ LC K ++ EA+ ++ M +G +P
Sbjct: 644 PSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVP 679
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 110 EKALNQCELTL-TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
E A N C + T +L++N + + +A++ +++ P +N ++D +
Sbjct: 390 EMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAK--GCPPDIFTYNTLIDGYCK 447
Query: 169 ARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
+ ++ + M PD++ TY LLN A EE + +F +E G +
Sbjct: 448 QLKLDSATEMVNRMWSQGMTPDVI---TYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPN 504
Query: 223 LSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ + ++ LC+ K V E + E + D+ + + G+C +G++ A + ++
Sbjct: 505 IITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFR 564
Query: 282 DIIKSK--CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
+ K C + TY V+A +++ + A++LF M G PD T +ID C
Sbjct: 565 RMEKQYDVCHT-TATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCK 623
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
I + + L E + +P++TT+ ++ LC ++ + M QK +P
Sbjct: 624 MGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQK--GIVPE- 680
Query: 400 ITFNYLLKSLKKPEEVPWVL 419
T N + ++ KK P +L
Sbjct: 681 -TVNTIFEADKKVVAAPKIL 699
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 178/355 (50%), Gaps = 26/355 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + FN +++ +A+R + ++F+EM P+++ TY IL++ VE+A
Sbjct: 122 PDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVI---TYSILIDAVCKCGGVEKA 178
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM-NIILNG 266
+ VF K G ++ + +++ L + HV+ A FE +E + + N +++G
Sbjct: 179 LKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHG 238
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
G A + +++++ +PD VT+ + V L G+ A R+FQ + G D
Sbjct: 239 LGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALD 298
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V N +ID LC KR+ EA E+ E++ G +P+V T+N+L+ LCK R+ + L
Sbjct: 299 VNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLG 358
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+M K C P+ +N L+ L+K EE +L M+ G + TYN + ++
Sbjct: 359 DM--KRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTL----ID 412
Query: 444 WDC-----EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
C ED +R +EE+ KG + +Y +++GL GR+++A F+ M+
Sbjct: 413 ESCKGGRIEDALR-LFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMK 465
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 187/403 (46%), Gaps = 15/403 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF---VELIQVFDEMPDLVNEKTYGILL 195
AY FFKWV + P ++++LG ARRF E++ ++ ++ + + L
Sbjct: 2 AYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELA 61
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFG 254
YA+A ++E+++ R + SA+ +L+ + + + A + ++
Sbjct: 62 RGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLR 121
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D T N+++N + V + ++++ C P+ +TY+ ++A+ K G + AL++
Sbjct: 122 PDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKV 181
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M +G +P++ T +ID L + +A + EM + G + YNSLI L +
Sbjct: 182 FLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGR 241
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMST 431
R + + EM K P+ +TF L+ L + E + + GC +
Sbjct: 242 SGRADAAAKLFREMLSKG--LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
+ YNV++ D+ + E+E+ G+ PD ++ ++ GL GR+ DA +
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359
Query: 492 MRLKGMVPEPRTGILVNDMNIKLKERG---EQGKKVIKLTSLG 531
M+ G P+ + N + L++ G E G+ ++++ SLG
Sbjct: 360 MKRAGCTPDV---TVYNTLIDGLRKSGRVEEAGQLLLEMQSLG 399
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 177/372 (47%), Gaps = 12/372 (3%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
E A+ F+ S G +P S + +++D LG+ + + ++F++M D N Y
Sbjct: 437 EEAHRIFESASERG-CNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTS 495
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L+ + E+ ++ G DL+ + + + VE FE K+ F
Sbjct: 496 LIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKS-F 554
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G+ D+++ +I+++G G E ++ + + D+ Y V+ L K GK+ A
Sbjct: 555 GFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKA 614
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ + M K P V T I+D L R+ EA + E K++G NV Y+SLI
Sbjct: 615 YEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDG 674
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCK 428
K+ R++ Y L+EM +K + PN T+N L+ +L K EE+ L + M+ C
Sbjct: 675 FGKVGRIDEAYLILEEMMKKGLT--PNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCS 732
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+T TY++++ +K W+EM+K+G+ P+ +YT MI GL G + DA S
Sbjct: 733 PNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSL 792
Query: 489 FHEMRLKGMVPE 500
F + G +P+
Sbjct: 793 FERFKTNGGIPD 804
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 176/402 (43%), Gaps = 44/402 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGI 193
+ A+ FF + G P + +++ VL +A R E ++F +M D+ Y
Sbjct: 263 DMAWKFFHELKAHG-LRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNT 321
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
++ Y +A ++A + +R +E G + + +F ++L L + + V+ A T F+ K +
Sbjct: 322 MIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA 381
Query: 254 GYDIKTMNIILNGWCVLGNVY-----------------------------------EAKR 278
+I T NII++ C+ G V EA R
Sbjct: 382 KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHR 441
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
++ + C P+SVTY + ++ L KKGK+ A RLF+ M + G + + +I
Sbjct: 442 IFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFF 501
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
R + ++ +EM RG P++T N+ + + K +E ++M K+ LP+
Sbjct: 502 MHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDM--KSFGFLPD 559
Query: 399 EITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+++ L+ L K E + + M + G + YN ++ DK E
Sbjct: 560 VRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLE 619
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
EM+ K + P +Y ++ GL RL++A F E + KG+
Sbjct: 620 EMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGI 661
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 117/516 (22%), Positives = 219/516 (42%), Gaps = 32/516 (6%)
Query: 20 FKFHSQLTTQFSKLQSCNSVTSHKTLIPIINLQARNSEFLFLGRIETAQLVHSLANSDEK 79
+ H QL++ S VTS+ + ++ L LF T L +++++
Sbjct: 22 LRIHRQLSSN-----SPPPVTSNTLSVELLRL-------LFAAPAWTPDLAGAVSSTLSS 69
Query: 80 SEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAA 139
+ P ++ + V LK S++ + + + + L D V+ D A
Sbjct: 70 AP---APAHDVVVYVLRSLKNPSLAAPFFLLASASSSQ-PLPPDAYNAVLPFLSHDLAAL 125
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNE---KTYGILLN 196
+ +S G Y + A++ L R+RR + +V M L Y +L+
Sbjct: 126 EKVLEEMSHLG-YGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIG 184
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGY 255
A A E A+ + + ++ G + F L+ L R +E A + K
Sbjct: 185 ALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEP 244
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
DI N+ ++ + G+V A +F+ ++ PD V+Y + V L K G+LG A LF
Sbjct: 245 DIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELF 304
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M + P N +I +R +A ++L ++ RGC+P+V ++NS++ L K
Sbjct: 305 GQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKK 364
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
++++ D M++ PN T+N ++ L + E + + ME G +
Sbjct: 365 RKVDEALTLFDVMKK---DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLL 421
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ N+++ + ++ +E ++G P+ +Y +I GL KG+++DA F +M
Sbjct: 422 SVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKM 481
Query: 493 RLKGMVPEPRTGILVNDM--NIKLKERGEQGKKVIK 526
G P I+ + N + R E G K+ K
Sbjct: 482 LDAGHDANP---IIYTSLIRNFFMHGRKEDGHKIYK 514
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 138/285 (48%), Gaps = 8/285 (2%)
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
G+AR + Q + ++ + Y +++ + V++A V + K ++ +
Sbjct: 574 GQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATY 633
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNVYEAKRFWKDII 284
+++ L + ++ A FE K++ G ++ + + +++G+ +G + EA ++++
Sbjct: 634 GSIVDGLAKIDRLDEAYMLFEEAKSK-GIELNVILYSSLIDGFGKVGRIDEAYLILEEMM 692
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K P+ T+ + ++AL K ++ AL FQ+M E P+ T + +I+ LC ++
Sbjct: 693 KKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYN 752
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A +EM+ +G +PNV TY ++I L K+ + Y + + G +P+ +FN
Sbjct: 753 KAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGG--IPDSASFNA 810
Query: 405 LLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
L++ + +P E V E GC+++ T +L +C
Sbjct: 811 LIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTEC 855
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 4/230 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P + +I+D L + R E +F+E +N Y L++ + ++EA +
Sbjct: 628 PTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLI 687
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCV 269
+ + G ++ + +L+ L + + ++ A F+S K + + T +I++NG C
Sbjct: 688 LEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCR 747
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ +A FW+++ K P+ VTY T ++ L K G + A LF+ G PD +
Sbjct: 748 VQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSAS 807
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
N +I+ + R EA +V E + RGC NV T SL+ L K + +E
Sbjct: 808 FNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLE 857
>gi|297807171|ref|XP_002871469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317306|gb|EFH47728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 602
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 213/457 (46%), Gaps = 28/457 (6%)
Query: 94 VQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS 153
+ N+L+ +V +E AL++ + + L+ + +R ++ FKW + ++
Sbjct: 73 ISNLLENTNVVPGSSLESALDETGIEPSLQLVQALFDRLSSSPMLLHSVFKWAEMKPGFT 132
Query: 154 PGSNVFNAILDVLGRARRF-VELIQVF-----DEMPDLVNEKTYGILLNRYAAAHMVEEA 207
++F+++++ L +AR F + VF DE +LV+ T+ +L+ RYA A MV++A
Sbjct: 133 LSPSLFDSVINSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQA 192
Query: 208 IGVFDRRKEFGEL----DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD----IKT 259
I F+ + + + +L + LL LC+ +V A + E + + ++
Sbjct: 193 IRAFEFARSYEPVCKSASELKLLEVLLDALCKEGYVREASVYLERRRGMMDSNWVPSVRI 252
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
NI+LNGW + +A++ W+++ +P VTY T + + ++ A+ + + M
Sbjct: 253 FNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVEIAMEILEEMK 312
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
+ + N IID L R+ EAL ++ P + TYNSL+K+ CK +
Sbjct: 313 MAEMELTFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLP 372
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNV 436
+ L M + P T+N+ K K EE + ++ G TY++
Sbjct: 373 GASKILKMMMTRG--VEPTTSTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHL 430
Query: 437 ILKLYVNWDCEDK----VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
ILK+ CED +EM+ +G+ PD + T+++H L LE+A F
Sbjct: 431 ILKML----CEDGKLSLAIQVNKEMKNRGIDPDLLTTTMLMHLLCRLDMLEEAFEEFDNA 486
Query: 493 RLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTS 529
+G++P+ T ++ D ++ K + K++ L S
Sbjct: 487 VRRGIIPQYITFKMI-DNGLRSKGMTDMAKRLSSLMS 522
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 154/355 (43%), Gaps = 32/355 (9%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
+ ++ P +FN +L+ R+R+ + ++++EM P +V TYG L+ Y
Sbjct: 243 DSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVV---TYGTLIEGYCRMR 299
Query: 203 MVEEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVA----ETFFESEKNEFGYDI 257
VE A+ + + K E++ F ++ L + A E FF E G I
Sbjct: 300 RVEIAMEILEEMK-MAEMELTFMVFNPIIDGLGEAGRLSEALGMMERFFVCES---GPTI 355
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T N ++ +C G++ A + K ++ EP + TY F +K K + L+
Sbjct: 356 VTYNSLVKNFCKAGDLPGASKILKMMMTRGVEPTTSTYNHFFKYFSKHNKTEEGMNLYFK 415
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
+ E G PD +T + I+ LC ++ A++V +EMKNRG P++ T L+ LC++
Sbjct: 416 LIEAGHSPDRLTYHLILKMLCEDGKLSLAIQVNKEMKNRGIDPDLLTTTMLMHLLCRLDM 475
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMST------ 431
+E +E D ++ +P ITF + L+ + + +R MS+
Sbjct: 476 LEEAFEEFDNAVRRG--IIPQYITFKMIDNGLRS----KGMTDMAKRLSSLMSSLPHSKK 529
Query: 432 --DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
+TY + + D + H E M G V + G + KG ED
Sbjct: 530 LPNTYREAVDAPPDKDRRKSILHRAEAMSDVLKGCRNPRKLVKMRGSHKKGVRED 584
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 178/375 (47%), Gaps = 13/375 (3%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEK 189
R D EA F K ++ + P + ++ L + R E + + EM + N
Sbjct: 303 RID-EAMDLFVKM--KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-S 248
TY +L++ + E+A + + E G + ++ + L+ C+ +E A E
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
E + + +T N ++ G+C NV++A +++ K PD VTY + ++ + G
Sbjct: 420 ESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
+A RL M ++G PD T +ID+LC KR+ EA ++ ++ +G PNV Y +L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN 425
I CK +++ + L++M KN CLPN +TFN L+ L K +E + E+M +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKN--CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G + + T +++ + D +++M G PD +YT I +GRL DA
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 486 LSYFHEMRLKGMVPE 500
+MR G+ P+
Sbjct: 657 EDMMAKMRENGVSPD 671
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 160/352 (45%), Gaps = 18/352 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N +L+ L R E+ QV+ EM + N TY ++N Y VEEA +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFE------SEKNEFGYDIKTMNIILNGWCV 269
E G D + +L++ C+ K ++ A F +NE Y +++G CV
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAY-----THLIHGLCV 300
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ EA + + +C P TY + +L + AL L + M E G KP++ T
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ID+LC + + +A E+L +M +G +PNV TYN+LI CK +E + ++ ME
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 390 QKNGSCLPNEITFNYLLKSLKKP--EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ S PN T+N L+K K + VL +M TYN ++
Sbjct: 421 SRKLS--PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D M +G+ PDQ +YT MI L R+E+A F + KG+ P
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 173/377 (45%), Gaps = 20/377 (5%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKT 190
D + A F W+S+ Y + ++L +L G ++ + + D V +
Sbjct: 101 LDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDAL 160
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESE 249
Y + L R D R E + + LL L R+ V E+ + + E
Sbjct: 161 YVLDLCRKMNK----------DERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEML 210
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+++ +I T N ++NG+C LGNV EA ++ I+++ +PD TY + + ++ L
Sbjct: 211 EDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+A ++F M KG + + V +I LC +RI EA+++ +MK+ C P V TY LI
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
K LC +R + EME+ PN T+ L+ SL K E+ +L +M G
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIK--PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ TYN ++ Y + E ME + + P+ R+Y +I G Y K + A+
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG-YCKSNVHKAM 447
Query: 487 SYFHEMRLKGMVPEPRT 503
++M + ++P+ T
Sbjct: 448 GVLNKMLERKVLPDVVT 464
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 168/373 (45%), Gaps = 12/373 (3%)
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARR--FVELIQVFDEMP---DLVNEKTYGILLNRY 198
++VS+ + + F ++G +R +VF+EMP NE Y L++
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAETFFESEKNEFGYDI 257
A ++EA+ +F + K+ + + L+ LC + E E E+ +I
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T ++++ C +A+ +++ P+ +TY +N K+G + A+ + +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M + P+ T N +I C K + +A+ VL +M R LP+V TYNSLI C+
Sbjct: 419 MESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTY 434
++ Y L M + +P++ T+ ++ SL K+ EE + + +E+ G + Y
Sbjct: 478 FDSAYRLLSLMNDRG--LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++ Y D+ E+M K P+ ++ +IHGL G+L++A +M
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 495 KGMVPEPRTGILV 507
G+ P T ++
Sbjct: 596 IGLQPTVSTDTIL 608
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 170/385 (44%), Gaps = 25/385 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEK-TYGILLNRYAAAHMVEEAIGV 210
P +N+++D R+ F ++ M D LV ++ TY +++ + VEEA +
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWC 268
FD ++ G ++ + L+ C+ V+ A E KN + T N +++G C
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL-TFNALIHGLC 578
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G + EA + ++K +P T ++ L K G A FQ M G KPD
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T I C + R+ +A +++ +M+ G P++ TY+SLIK + + ++ L M
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER-MERNGCKMSTDTYNVILKLYVNWDCE 447
++ C P++ TF L+K L E+ + ++ E C MS N
Sbjct: 699 --RDTGCEPSQHTFLSLIKHLL---EMKYGKQKGSEPELCAMS------------NMMEF 741
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF-HEMRLKGMVPEPRTGIL 506
D V E+M + + P+ +SY +I G+ + G L A F H R +G+ P
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNA 801
Query: 507 VNDMNIKLKERGEQGKKVIKLTSLG 531
+ KLK+ E K V + +G
Sbjct: 802 LLSCCCKLKKHNEAAKVVDDMICVG 826
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 174/391 (44%), Gaps = 43/391 (10%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
++++AY ++ G P + +++D L +++R E +FD + P++V
Sbjct: 477 NFDSAYRLLSLMNDRG-LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV-- 533
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
Y L++ Y A V+EA + ++ L + F L+ LC ++ A T E
Sbjct: 534 -MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-TLLEE 591
Query: 249 EKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ + G + T I+++ G+ A ++ ++ S +PD+ TY TF+ ++G
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+L A + M E G PD+ T + +I + A +VL+ M++ GC P+ T+
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711
Query: 367 SLIKHL---------------CKIKRM---ETVYEYLDEMEQKNGSCLPNEITFNYLL-- 406
SLIKHL C + M +TV E L++M + S PN ++ L+
Sbjct: 712 SLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH--SVTPNAKSYEKLILG 769
Query: 407 ----KSLKKPEEVPWVLERMERN-GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
+L+ E+V + M+RN G S +N +L ++ ++M G
Sbjct: 770 ICEVGNLRVAEKV---FDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
P S V+I GLY KG E S F +
Sbjct: 827 HLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 132/350 (37%), Gaps = 69/350 (19%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYG---ILLNRYAAAHMVEEAIGV 210
P S FNA++ L + E + ++M + + T IL++R + A
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCV 269
F + G D + + CR + AE + +N D+ T + ++ G+
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL--TKKGK----------------LGTA 311
LG A K + + CEP T+ + + L K GK T
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM-KNRGCLPNVTTYNSLIK 370
+ L + M E P+ + +I +C + A +V M +N G P+ +N+L+
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 371 HLCKIKRMETVYEYLDEM-----------------------EQKNGSCLPNEITFNYLLK 407
CK+K+ + +D+M E++ G+ + F LL+
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSV-----FQNLLQ 859
Query: 408 SLKKPEEVPW------------------VLERMERNGCKMSTDTYNVILK 439
+E+ W + ME+NGCK S+ TY+++++
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 194/424 (45%), Gaps = 48/424 (11%)
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQ-VFDEMPDL---VNEKTYGILLNRYAAA 201
+++ + PG +NAILD + R ++ V++ + +F EM + N TY IL+ + A
Sbjct: 157 LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTA 216
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV---------------------- 239
+E + F + G L ++ + ++ C+ + +
Sbjct: 217 GNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISY 276
Query: 240 --------------EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
E +E E K + D T N ++NG+C +GN ++A +++K
Sbjct: 277 NVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVK 336
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+ P+ VTY T +N++ K G L A+ M ++G P+ T +ID + + +
Sbjct: 337 NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A ++++EM G P + TYN+LI C + RME L EM ++ +P+ ++++ +
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIER--GFIPDVVSYSTI 454
Query: 406 LKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ + +E+ + M G TY+ +++ +V ++EM G+
Sbjct: 455 ISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGL 514
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQG 521
PD+ +YT +I+ +G L+ AL EM KG P+ T +L+N N + R ++
Sbjct: 515 PPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFN--KQSRTKEA 572
Query: 522 KKVI 525
K+++
Sbjct: 573 KRLL 576
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 167/377 (44%), Gaps = 30/377 (7%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
Y P FN +++ F + + + EM P++V TY L+N A +
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV---TYTTLINSMCKAGNLN 360
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
A+ D+ ++ G + + L+ + ++ A + E +N F I T N ++
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
NG C+LG + +A +++I+ PD V+Y+T ++ + +L A +L M KG
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDV T + +I LC ++R+ E ++ +EM + G P+ TY SLI C ++
Sbjct: 481 PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYN------ 435
DEM QK S P+ +T+N L+ K +E +L ++ + TYN
Sbjct: 541 HDEMIQKGFS--PDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598
Query: 436 ---------VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
++K + ++ E M +KG ++ Y V+IHG G +E A
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658
Query: 487 SYFHEMRLKGMVPEPRT 503
+ + EM G P T
Sbjct: 659 NLYKEMLHSGFAPHSVT 675
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 29/341 (8%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R+ P + ++D + + Q+ EM P ++ TY L+N +
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTII---TYNALINGHCIL 426
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTM 260
+E+A G+ E G + D+ ++ ++ CR + +E A + E D+ T
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+ ++ G C + E +++++ PD VTY + +NA +G L ALRL M +
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KG PD+VT N +I+ + R EA +L ++ +PN TYN+LI + +
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNL----- 601
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
E+ + G C+ + E VLE M + G K++ + YNVI+
Sbjct: 602 --EFKSALALMKGFCMKGLMN------------EADRVLESMLQKGYKLNEEVYNVIIHG 647
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
+ +K + ++EM G P + + LY +G+
Sbjct: 648 HSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 6/165 (3%)
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE-YLDEMEQKNGSCLPNEIT 401
I +AL ++ K+ G +P V +YN+++ + + K+ + E EM + S PN T
Sbjct: 148 INKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVS--PNVYT 205
Query: 402 FNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
+N L++ + L MERNGC + TYN I+ Y + M
Sbjct: 206 YNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMA 265
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
KG+ P+ SY V+I+GL +G++++ EM + VP+ T
Sbjct: 266 LKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 181/376 (48%), Gaps = 20/376 (5%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
+ G SPG V+N ++ L + +R + ++FDEM D N TY L++ Y +
Sbjct: 209 KRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQL 268
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNI 262
EEA + +R K + F +LL LCR + +E A+ E E +G+ D T
Sbjct: 269 EEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLE-EMEVYGFVPDRFTYTT 327
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+ +G GNV + ++ ++ + T + +NAL K+G + A + + E G
Sbjct: 328 LFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENG 387
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P V N I++ C I +A + +M+ G PN TYNSL+K C++K ME
Sbjct: 388 LAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAE 447
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
+ + +M +K LPN T+N L+ + + +LE ME+ G K + +Y +
Sbjct: 448 KCIKKMVEK--GVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCL-- 503
Query: 440 LYVNWDCED----KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+N C+D + +M +G+ P+ + Y ++I G G+L+DA +F EM +
Sbjct: 504 --INCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAR 561
Query: 496 GMVPEPRT-GILVNDM 510
+VP T IL+N +
Sbjct: 562 EIVPTLVTYNILINGL 577
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 13/318 (4%)
Query: 226 FQNLLLWLCRYKHV--EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
F ++LL +C + E AE + +K+ + ++N+ L + + + +I
Sbjct: 114 FSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEI 173
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
++S PD Y + A K G L A+ L M G P V N +I LC +KR+
Sbjct: 174 VESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRM 233
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
+A ++ EM +R PN TYN+LI CK+ ++E + + M+ +N P ITFN
Sbjct: 234 KDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVE--PTIITFN 291
Query: 404 YLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
LL L + EE VLE ME G TY + ++ D EE +K
Sbjct: 292 SLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRK 351
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQ 520
G+ + +++++ L +G +E A + G+ P G+ N + + G+
Sbjct: 352 GVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAP---VGVFFNTIVNGYCQVGDI 408
Query: 521 GKK---VIKLTSLGLKGN 535
K + K+ ++GL+ N
Sbjct: 409 NKAYTTIEKMEAVGLRPN 426
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 180/407 (44%), Gaps = 14/407 (3%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D AYT + + G P +N+++ + E + +M + L N +TY
Sbjct: 407 DINKAYTTIEKMEAVG-LRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETY 465
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEK 250
L++ Y + + + + + ++ G ++ ++ L+ LC+ ++ AE +
Sbjct: 466 NTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVH 525
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ + N++++G C+ G + +A RF+ +++ + P VTY +N L KKGK+
Sbjct: 526 RGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVME 585
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L + KG DV+T N +I + +ALE+ MK G P + TY+ LI
Sbjct: 586 AENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIA 645
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGC 427
C + + V + EM Q N +P+ + +N L+ + +V ME G
Sbjct: 646 G-CGKEGLVLVEKIYQEMLQMN--LVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGI 702
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ TYN ++ + KV++ +M+ +G+ P +Y ++I G + A
Sbjct: 703 QPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYV 762
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKG 534
++ EM G P + +++ L+E G + + + +KG
Sbjct: 763 WYREMFENGFTPSVS---ICDNLITGLREEGRSHDADVICSEMNMKG 806
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 187/418 (44%), Gaps = 53/418 (12%)
Query: 130 NRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------P 183
+ F + A FK P F +L+ L + ++ +++FDE+ P
Sbjct: 120 DHVHFAFSALGKMFKL-----GLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAP 174
Query: 184 DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE 243
L+ TY ++ A+ + + +E G D+ A+ ++ LC+ + A
Sbjct: 175 SLI---TYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAM 231
Query: 244 TFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
FF SE + G ++ T + IL+G+C LG + EA +K +I P++VT+ V+
Sbjct: 232 YFF-SEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDG 290
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K+G + A R+F+ M E G +PD T + ++D C + ++ EA ++ M +G P+
Sbjct: 291 LCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPS 350
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKN-------------GSC------------- 395
V YN LI CK +R+ L EM ++ G C
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK 410
Query: 396 -------LPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
LP+ IT++ LL L K +E +L+ M+ + + YN++++ N+
Sbjct: 411 EMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFG 470
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ R + + KG+ P +YTVMI GL +G +A F +M + G +P T
Sbjct: 471 KLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCT 528
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 132/296 (44%), Gaps = 16/296 (5%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
T+T ++V+ + + EA F + E P + ++A++D + E ++
Sbjct: 281 TVTFTILVDGLCKEGMILEARRVF--EMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL 338
Query: 179 FDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
FD M P + + Y IL+N + + + EA + + D + L+
Sbjct: 339 FDIMVGKGFAPSV---RVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQG 395
Query: 233 LCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
C+ +VA+ F+ E +G D T +I+L+G C G++ EA R K + +SK EP
Sbjct: 396 FCQAGRPQVAQKLFK-EMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEP 454
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
Y + + GKL A LF ++ KG +P VVT +I L + EA E+
Sbjct: 455 HICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMF 514
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
R+M GCLPN TYN I+ + ++EM + S + TF LL
Sbjct: 515 RKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFS--ADSSTFQMLL 568
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 121/263 (46%), Gaps = 11/263 (4%)
Query: 256 DIKTMNIILNGWCV----LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+I +I G+C L +V +A + ++ + P V + + +L KK T
Sbjct: 29 NISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTV 88
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKR--IPEALEVLREMKNRGCLPNVTTYNSLI 369
+ L + M +P+V T +I+ LC R + A L +M G P T+ +L+
Sbjct: 89 ISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLL 148
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNG 426
LC ++ + DE+ + + P+ IT+ ++K L K +L++ME G
Sbjct: 149 NGLCSKAKIIDAVKLFDEIGKMGFA--PSLITYTTIIKGLCKIGHTTNALQLLKKMEEKG 206
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
CK YN ++ ++ + + EM +G+ P+ +Y+ ++HG + G+L +A
Sbjct: 207 CKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEAT 266
Query: 487 SYFHEMRLKGMVPEPRTGILVND 509
S F +M + ++P T ++ D
Sbjct: 267 SLFKQMIGRNVMPNTVTFTILVD 289
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 176/367 (47%), Gaps = 16/367 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
+ +AAY F + ++ P + A++ L R + +E +VF++M PD E
Sbjct: 95 NIQAAYKLFDEMEKQ-RIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPD---E 150
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFE 247
TY L++ Y + +E+A + ++ + G ++ + L LC+ V+ A E E
Sbjct: 151 VTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHE 210
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+I T N ++NG C GN+ +A + +++ + PD++T+ T ++A K G+
Sbjct: 211 MCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGE 270
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A L + M ++G +P V+T N +++ C + + +L M +G +PN TTYNS
Sbjct: 271 MVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNS 330
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PWVLER-MER 424
L+K C M E M + +P+ T+N L+K K + W L + M
Sbjct: 331 LMKQYCIRNNMRCTTEIYKGMCAR--GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAE 388
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G ++ +YN I+K + + R +EEM ++GM D Y + + Y +G +E
Sbjct: 389 KGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMET 448
Query: 485 ALSYFHE 491
AL E
Sbjct: 449 ALELCDE 455
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 152/327 (46%), Gaps = 9/327 (2%)
Query: 181 EMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
+ PD+V +Y ++N Y +++ + + + G +L + +++L LC+ V+
Sbjct: 6 DAPDVV---SYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVD 62
Query: 241 VAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
AE N+ D +++G+C LGN+ A + + ++ K + PD + Y +
Sbjct: 63 DAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVI 122
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
L + GK+ A ++F M+ +G +PD VT +ID C + +A + +M G
Sbjct: 123 CGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLT 182
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW-- 417
PNV TY +L LCK+ +++T E L EM K N T+N L+ L K +
Sbjct: 183 PNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQ--LNICTYNSLVNGLCKSGNIRQAV 240
Query: 418 -VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
++E ME G T T+ ++ Y K EM +G+ P ++ V+++G
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300
Query: 477 YDKGRLEDALSYFHEMRLKGMVPEPRT 503
G LED M KG++P T
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTT 327
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 154/343 (44%), Gaps = 10/343 (2%)
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
G ++ ++LIQ N TY ++ + V++A V G + D +
Sbjct: 24 GELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVY 83
Query: 227 QNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
L+ C+ +++ A F E EK D ++ G C G + EA + + +
Sbjct: 84 TTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFS 143
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
EPD VTY T ++ K G++ A L M + G P+VVT + D LC ++
Sbjct: 144 RGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDT 203
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A E+L EM +G N+ TYNSL+ LCK + + ++EME P+ ITF L
Sbjct: 204 ANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV--AGMYPDTITFTTL 261
Query: 406 LKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLY-VNWDCEDKVR-HTWEEMEKK 460
+ + K E+ +L M G + + T+NV++ + ++ ED R W M +K
Sbjct: 262 MDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAW--MLEK 319
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G+ P+ +Y ++ + + + M +G++P+ T
Sbjct: 320 GIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNT 362
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G PDVV+ + +I+ C + + L++++EM+ +G PN+ TYNS+I LCK +++
Sbjct: 4 RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVI 437
L EM N +P+ + + L+ K + + + ME+ Y +
Sbjct: 64 AERVLREM--INQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAV 121
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + + +M +G+ PD+ +YT +I G G +E A S ++M G+
Sbjct: 122 ICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGL 181
Query: 498 VPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
P T + D KL + + + ++ GL+ N
Sbjct: 182 TPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLN 219
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN---YLLKSL 409
MK RG P+V +Y+++I C ++ V + + EM+ K PN T+N LL
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLK--PNLYTYNSIILLLCKS 58
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
K ++ VL M G T Y ++ + ++EMEK+ + PD +Y
Sbjct: 59 GKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAY 118
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
T +I GL G++ +A F++M +G+ P+ T
Sbjct: 119 TAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVT 152
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 146/290 (50%), Gaps = 6/290 (2%)
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEA 276
G DL L+ C + ++ + + K + D+ T+ ++ G C+ G V +A
Sbjct: 99 GITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKA 158
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
+F D++ + + D ++Y T +N L K G+ A++L + + E+ KPDVV N IID+
Sbjct: 159 LKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDS 218
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
LC K + EA + EM + PNV TY +LI C + + L+EM+ KN +
Sbjct: 219 LCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNIN-- 276
Query: 397 PNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
P+ TF+ L+ +L K + VL M + K TYN ++ Y + ++
Sbjct: 277 PDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYV 336
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ M + G+ P +SYT+MI GL +++A+S F EM+ K ++P T
Sbjct: 337 FNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTIT 386
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 156/353 (44%), Gaps = 41/353 (11%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFES 248
+YG L+N + AI + +E D+ + ++ LC+ K V E + E
Sbjct: 176 SYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEM 235
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ ++ T ++ G+C++G + EA ++ PD T++ ++AL K+GK+
Sbjct: 236 NAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKM 295
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCI----------------------------------- 333
A + M + KPDVVT N +
Sbjct: 296 KAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIM 355
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
ID LC K + EA+ + EMK++ +PN T+NSLI LCK R+ V++ +D+M +
Sbjct: 356 IDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDR-- 413
Query: 394 SCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
S L + IT++ L+ +L K ++ + ++M + TY +++
Sbjct: 414 SQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIA 473
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ ++ + KG D R+YTVMI G G ++AL+ +M G +P T
Sbjct: 474 QEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAIT 526
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 5/221 (2%)
Query: 143 FKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYA 199
F +++ G +PG + ++D L + + E I +F+EM + N T+ L++
Sbjct: 337 FNSMAQSG-VTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLC 395
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIK 258
+ + + D+ ++ +L D+ + +L+ LC+ H++ A F+ E D+
Sbjct: 396 KSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMY 455
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T I+++G C G + A+ ++ ++ D TY ++ K G AL L M
Sbjct: 456 TYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKM 515
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ G P+ +T + II AL K +A ++LREM RG L
Sbjct: 516 EDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 173/388 (44%), Gaps = 44/388 (11%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
L+ D++V+V+N R D E FF+W Y+ + FN +L+ L R++ Q+
Sbjct: 1626 LSTDIVVDVLNHAR-DVEPTIQFFEWCHGRHGYTHTAFAFNRLLEFLVNKRQYKRAHQML 1684
Query: 180 --DEMPDL--VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+ P N TY ++ Y +A+ + + K+ + + +L LC+
Sbjct: 1685 IAESKPSSFQANAFTYSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLCK 1744
Query: 236 Y-KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ K E + DI T NI++N C +G + +A+ + + +C D VT
Sbjct: 1745 HGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVT 1804
Query: 295 YATFVNALTKKG----KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
Y T ++ L +KG ++ A RLF+ M +KG P VT +IDAL K +A +VL
Sbjct: 1805 YNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVL 1864
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
M GC ++ TYN LI K M+ + EM + C+P+ +T+N ++
Sbjct: 1865 DLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRG--CIPDVVTYNSIVDGFC 1922
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
K +V ++ + EM+ +G+ P+ R+YT
Sbjct: 1923 KAGKV--------------------------------EEANKLFAEMKARGIFPNGRTYT 1950
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ GR++DA +Y EMR +G+V
Sbjct: 1951 SITDACLKAGRMQDAHAYLVEMRKEGLV 1978
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 150/317 (47%), Gaps = 11/317 (3%)
Query: 225 AFQNLLLWLCRYKHVEVAETFF--ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
AF LL +L + + A ES+ + F + T + I+ G+C G +A +
Sbjct: 1663 AFNRLLEFLVNKRQYKRAHQMLIAESKPSSFQANAFTYSTIVRGYCEDGETRQALALLEH 1722
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ K++ ++ Y + L K GK AL L +M PD+ T N +I+ALC R
Sbjct: 1723 MKKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGR 1782
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK----RMETVYEYLDEMEQKNGSCLPN 398
+ +A ++ M+ R C ++ TYN+LI LC+ R+E + +EM K + P
Sbjct: 1783 LEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHT--PT 1840
Query: 399 EITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+T+ ++ +L K E+ VL+ M NGC TYN+++ + DK +
Sbjct: 1841 SVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFV 1900
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLK 515
EM +G PD +Y ++ G G++E+A F EM+ +G+ P RT + D +K
Sbjct: 1901 EMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAG 1960
Query: 516 ERGEQGKKVIKLTSLGL 532
+ ++++ GL
Sbjct: 1961 RMQDAHAYLVEMRKEGL 1977
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 176/376 (46%), Gaps = 22/376 (5%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEA 207
+ SP FN ++ L + R I+VF MP+ L + TY L++ ++EA
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCR----YKHVEVAETFF--ESEKNEFGYDIKTMN 261
+ + D + G + L+ LC+ + ++ + F NE Y N
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY-----N 296
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++G C+ G + +A + ++ SKC P+ VTY T +N L K+ + A+RL +M E+
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G + + +I L + + EA+ + R+M +GC PN+ Y+ L+ LC+ +
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
E L+ M CLPN T++ L+K K EE V + M++ GC + Y+V++
Sbjct: 417 KEILNRMIA--SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ W +M G+ PD +Y+ +I GL G ++ AL +HEM +
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ--- 531
Query: 499 PEPRTGILVNDMNIKL 514
EP++ V NI L
Sbjct: 532 EEPKSQPDVVTYNILL 547
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 176/374 (47%), Gaps = 14/374 (3%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRY 198
FK + G + G + +++++ + F + ++ + ++ E+++ ++ Y
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAY 122
Query: 199 AAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCR----YKHVEVAETFFESEKN-E 252
AH+ ++A+ +F R EF + +F ++L + ++ +E + S N
Sbjct: 123 GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ + N+++ C L V A ++ + + KC PD TY T ++ L K+ ++ A+
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L M +G P V N +ID LC K + +++ M +GC+PN TYN+LI L
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
C +++ L+ M + C+PN++T+ L+ L ++ + +L ME G +
Sbjct: 303 CLKGKLDKAVSLLERM--VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ Y+V++ ++ W +M +KG P+ Y+V++ GL +G+ +A
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 490 HEMRLKGMVPEPRT 503
+ M G +P T
Sbjct: 421 NRMIASGCLPNAYT 434
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 170/354 (48%), Gaps = 15/354 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFD-------EMPDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
FN++L+V+ + ++ +D M N ++ +++ V+ AI VF
Sbjct: 151 FNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVF 210
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM-NIILNGWCVL 270
E L D + L+ LC+ + ++ A + ++E + N++++G C
Sbjct: 211 RGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKK 270
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G++ + ++ C P+ VTY T ++ L KGKL A+ L + M P+ VT
Sbjct: 271 GDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTY 330
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+I+ L ++R +A+ +L M+ RG N Y+ LI L K + E +M +
Sbjct: 331 GTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE 390
Query: 391 KNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK-LYVNWDC 446
K C PN + ++ L+ L KP E +L RM +GC + TY+ ++K + C
Sbjct: 391 KG--CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLC 448
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
E+ V W+EM+K G ++ Y+V+I GL GR+++A+ + +M G+ P+
Sbjct: 449 EEAV-QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 151/340 (44%), Gaps = 71/340 (20%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P + +++ L + RR + +++ M + +N+ Y +L++ EEA+ +
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCR-----------------------YKHVEVAETFFE 247
+ + E G ++ + L+ LCR Y + + + FF+
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 248 S------------------EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
+ +N+F Y +++++G C +G V EA W ++ +
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCY-----SVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMW---EKGRKPDVVTCNCIIDALCFKKRIPEA 346
PD+V Y++ + L G + AL+L+ M E +PDVVT N ++D LC +K I A
Sbjct: 500 PDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRA 559
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHL------CKIKR--METVYEYLDEMEQKNGSC--- 395
+++L M +RGC P+V T N+ + L C R +E + L + ++ +G+C
Sbjct: 560 VDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIV 619
Query: 396 --------LPNEITFNYLLKSLKKPEEVPWVLERMERNGC 427
P T+ +++ + KP+++ +++ RN C
Sbjct: 620 EVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKCWRNLC 659
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 173/386 (44%), Gaps = 23/386 (5%)
Query: 107 GEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNV--FNAILD 164
E+ + L Q L+ + + V++R D A F+ + P NV N +L
Sbjct: 213 AELLRRLRQYGLSPSPESCNAVLSRLPLD--EAIALFREL-------PDKNVCSHNILLK 263
Query: 165 VLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
L A R + Q FDEM PD+V TYG +++ Y +E A+ + D G
Sbjct: 264 ALLSAGRLKDACQHFDEMSSPPDVV---TYGTMVHGYCVRGELENAVKLLDEMAAKGLES 320
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
+ + + +++ LC V A E + D +++G+C G++ A+R +
Sbjct: 321 NATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLF 380
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+++ K D VT+ +N L + G+L A R+ Q M +KG DVVT +ID C +
Sbjct: 381 EEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKR 440
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
+ EA V EM R PNV TY +L LCK + E L EM K N
Sbjct: 441 GNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLEL--NVY 498
Query: 401 TFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T+N L+ L K E+ ++ ME G + TY ++ D+ + +EM
Sbjct: 499 TYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEM 558
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLE 483
KG+ P +Y V+++G GR+E
Sbjct: 559 LDKGIKPSIATYNVLMNGFCMSGRVE 584
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 175/408 (42%), Gaps = 47/408 (11%)
Query: 106 KGEIEKALNQCE------LTLTDDLIVNVINRY--RFDWEAAYTFFKWVSREGDYSPGSN 157
KG++ AL E + L + VI+ + + D AA F+ + + G +
Sbjct: 335 KGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRG-LAADRV 393
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
A+++ L RA E +V EM D V+ TY +L++ Y + EA V +
Sbjct: 394 THTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEM 453
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNV 273
++ + L LC+ V A N+ ++ T N ++NG C GN+
Sbjct: 454 VGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNL 513
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+A R ++ + D TY T ++ L K G+ A + Q M +KG KP + T N +
Sbjct: 514 EQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVL 573
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
++ C R+ ++L M + PNV TYNSL+K C K M++ E M +
Sbjct: 574 MNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEV 633
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
+ PNE T+N L+K CK N+ LY +
Sbjct: 634 A--PNENTYNILIK-----------------GHCK----ARNMKEALYFH---------- 660
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+EM +KG+ SY+ +I L K + +A +F +MR +G+ EP
Sbjct: 661 -QEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEP 707
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 171/386 (44%), Gaps = 21/386 (5%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
R+ SP NA+L L E I +F E+PD N ++ ILL +A +++A
Sbjct: 220 RQYGLSPSPESCNAVLSRLP----LDEAIALFRELPD-KNVCSHNILLKALLSAGRLKDA 274
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE---SEKNEFGYDIKTMNIIL 264
FD E D+ + ++ C +E A + ++ E + T I L
Sbjct: 275 CQHFD---EMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIAL 331
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C G V +A R +D+ D+V + T ++ KG L A RLF+ M ++G
Sbjct: 332 --LCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLA 389
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
D VT +I+ LC + EA VL+EM ++G +V TY LI CK M +
Sbjct: 390 ADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRV 449
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLY 441
+EM + + PN +T+ L L K +V +L M G +++ TYN ++
Sbjct: 450 HNEMVGRRVA--PNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGL 507
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ ++ EME G D +YT +I L G + A + EM KG+ P
Sbjct: 508 CKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSI 567
Query: 502 RT-GILVNDMNIKLKERGEQGKKVIK 526
T +L+N + R E GKK+++
Sbjct: 568 ATYNVLMN--GFCMSGRVEGGKKLLE 591
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 112/254 (44%), Gaps = 4/254 (1%)
Query: 153 SPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIG 209
+P + A+ D L G R EL+ +N TY L+N +E+A+
Sbjct: 459 APNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMR 518
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWC 268
+ + G D+ + L+ LC+ + A + ++ I T N+++NG+C
Sbjct: 519 IMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFC 578
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+ G V K+ + +++ P+ VTY + + + + +++ M + P+
Sbjct: 579 MSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNEN 638
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N +I C + + EAL +EM +G ++Y++LI+ L K K+ + D+M
Sbjct: 639 TYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKM 698
Query: 389 EQKNGSCLPNEITF 402
+ + P+ +F
Sbjct: 699 RNEGLTAEPDVYSF 712
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 162/357 (45%), Gaps = 9/357 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + A++ L R + I ++ +M + N TY L+N A+ +
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCV 269
F + G L + + ++ LC +E A FE K + T N ++NG+
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
GNV A R + ++ CEPD TY V+ +K GKL +A FQ M E G P+ V+
Sbjct: 456 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 515
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ID ++ AL +L+ M+ GC PNV +YN++I L K R + D+M
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV 575
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDC 446
++ LPN IT+ L+ L + + + ME+ C + TY+ ++
Sbjct: 576 EQ--GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ +EME+KG+ PD+ ++T +I G GR++ A M G P RT
Sbjct: 634 ADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRT 690
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 211/481 (43%), Gaps = 41/481 (8%)
Query: 48 IINLQARNSEFLFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKG 107
+++LQ +S FL + A + FQ I V IL V KG
Sbjct: 10 LVHLQNHSSVLGFLNFSSKPHISSHFAVPASREPFQ-----AIVSRVCAILS--RVQWKG 62
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
E L Q L + ++ ++ D E+ FF W+S+ Y N F ++L+ L
Sbjct: 63 SSE--LKQLSPQLKAHHVAEIVAVHK-DTESVIQFFYWISKRPFYKHNMNCFISMLNRLV 119
Query: 168 RARRFVELIQV-------------FDEMPDLVNEKT---YGI-------LLNRYAAAHMV 204
R R F + + D +NE + +G LL + A MV
Sbjct: 120 RDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMV 179
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNII 263
E A ++ + G L F L+ L + V AE + + D+ T +
Sbjct: 180 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 239
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G C N+ A + ++K C+P+SVTY+T +N L +G++ AL + + M EKG
Sbjct: 240 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+P V T I ALC + EA+E++ MK RGC PNV TY +LI L ++ ++E
Sbjct: 300 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 359
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK- 439
+M ++ +PN +T+N L+ L + + ME +G +T TYN I+K
Sbjct: 360 LYHKMLKE--GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 417
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
L + D E K +E+M K G P +Y +I+G KG + +A M+ G P
Sbjct: 418 LCLGGDIE-KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEP 476
Query: 500 E 500
+
Sbjct: 477 D 477
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 174/377 (46%), Gaps = 24/377 (6%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE----LIQVF--DEMPDLVNEKT 190
E A +K + G P FN ++++L + + E L Q+F D PD+ T
Sbjct: 180 EGARNLYKQMLNSG-IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVF---T 235
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y L+ + ++ A GVFDR + G + + L+ LC V+ A E E
Sbjct: 236 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLE-EM 294
Query: 251 NEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
E G + + T + + C + + EA + K C P+ TY ++ L++ GKL
Sbjct: 295 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 354
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A+ L+ M ++G P+ VT N +I+ LC R AL++ M+ G L N TYN +
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 414
Query: 369 IKHLC---KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERM 422
IK LC I++ ++E + +M LP +T+N L+ V +L+ M
Sbjct: 415 IKGLCLGGDIEKAMVLFEKMLKMGP-----LPTVVTYNTLINGYLTKGNVNNAARLLDLM 469
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+ NGC+ TYN ++ + W + ++EM + G+ P+ SYT +I G G++
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529
Query: 483 EDALSYFHEMRLKGMVP 499
+ ALS M G P
Sbjct: 530 DIALSLLKRMEEMGCNP 546
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 166/364 (45%), Gaps = 21/364 (5%)
Query: 93 NVQNILKTCS-VSTKGEIEKALNQCELTLTDDLIVNVINRYRF--------DWEAAYTFF 143
NVQ S +S G++E A+ L + L+ N + + A F
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396
Query: 144 KWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAA 200
W+ G + + +N I+ L G + + L + +M L TY L+N Y
Sbjct: 397 HWMEGHGSLA-NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM 260
V A + D KE G D + L+ ++ +E A +F+ E E G + +
Sbjct: 456 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ-EMVECGLNPNPV 514
Query: 261 N--IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
+ +++G G V A K + + C P+ +Y +N L+K+ + A ++ M
Sbjct: 515 SYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 574
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
E+G P+V+T +ID LC R A ++ +M+ R CLPN+ TY+SLI LC+ +
Sbjct: 575 VEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA 634
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYN 435
+ L EME+K + P+E+TF L+ L + + +L RM GCK + TY+
Sbjct: 635 DEAEILLKEMERKGLA--PDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYS 692
Query: 436 VILK 439
V+LK
Sbjct: 693 VLLK 696
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N +Y L++ ++ V+ A+ + R +E G ++ ++ ++ L + AE
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 571
Query: 247 ESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ + ++ T +++G C G A + + D+ K KC P+ TY++ + L ++
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK A L + M KG PD VT +ID RI A +LR M + GC PN TY
Sbjct: 632 GKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTY 691
Query: 366 NSLIKHLCK 374
+ L+K L K
Sbjct: 692 SVLLKGLQK 700
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P +NA+++ L + RF E ++ D+M + L N TY L++ + A
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWC 268
+F ++ L +L + +L+ LC+ + AE E E+ D T +++G+
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV 664
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
VLG + A + ++ C+P+ TY+ + L K+
Sbjct: 665 VLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKE 701
>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
Length = 484
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 173/392 (44%), Gaps = 18/392 (4%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
L L+ +VI R A FF W S++ Y + +L L RARR E ++ F
Sbjct: 9 LEPRLVGSVIRRVP-SLALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFF 67
Query: 180 DE------MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
P L ++ I++ + A + G D++A+ +L
Sbjct: 68 KRELCAHCRPSLY---SFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGY 124
Query: 234 CRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
C V A F ++ T N ++NG C G + A + + +PD
Sbjct: 125 CDLGRVGRALIKFGKMGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGF 184
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY+T V+ L + +L A++++ M E D N + D C ++R+ EALEVL+ M
Sbjct: 185 TYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTM 244
Query: 354 KNRGCLPNVTTYNSLIKHLCKIK-RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
RGC P+V TYN +I +C+ K R+E Y +M + C PN +T+ ++ L K
Sbjct: 245 IQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSD--CPPNAVTYGTMILGLSKI 302
Query: 413 EEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
EV LE M + G Y+ ++ +V D+ + ++ + +GPD Y
Sbjct: 303 YEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMY 362
Query: 470 TVMIHGL--YDKGRLEDALSYFHEMRLKGMVP 499
T +I G K R+++AL F M+ + + P
Sbjct: 363 TTLISGYCRARKPRVDEALLLFQNMKDRRVWP 394
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 145/319 (45%), Gaps = 14/319 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMP-DLVNEK--TYGILLNRYAAAHMVEEAIGV 210
P +N +++ L + + + +F +P DLV+ TY L++ A +E AI V
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKV 205
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHV----EVAETFFESEKNEFGYDIKTMNIILNG 266
+D E D A+ + C+ + V EV +T + + T N I+NG
Sbjct: 206 YDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKP---SVVTYNCIING 262
Query: 267 WCVLGN-VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C N + EA R ++ ++ S C P++VTY T + L+K ++ L LF+ M + G P
Sbjct: 263 VCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSP 322
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D + +I A +++ EA +L++ P+V Y +LI C+ ++ L
Sbjct: 323 DGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALL 382
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
K+ PN IT+N +L+ L K +E + + M + C + T+ V+ +
Sbjct: 383 LFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMI 442
Query: 443 NWDCEDKVRHTWEEMEKKG 461
+ DK + +M KG
Sbjct: 443 HCGKTDKFERIFMDMVYKG 461
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 12/250 (4%)
Query: 85 YPGDEIAINVQ--NILKTCSVSTKGEIEKALNQ--CELTL-TDDLIVNVINRYRFDWEAA 139
Y GD A N K V E+ K + Q C+ ++ T + I+N + +Y+ E A
Sbjct: 214 YDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEA 273
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGR---ARRFVELIQVFDEMPDLVNEKTYGILLN 196
Y F+ + D P + + ++ L + +R +EL + + + Y L+
Sbjct: 274 YRLFQQMV-GSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIY 332
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF--FESEKNEFG 254
+ ++EA + D+ + L+ CR + V E F++ K+
Sbjct: 333 AFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRV 392
Query: 255 Y-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
+ ++ T NI+L G C G EA + ++++ K KC P+ +T+ + GK R
Sbjct: 393 WPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFER 452
Query: 314 LFQAMWEKGR 323
+F M KGR
Sbjct: 453 IFMDMVYKGR 462
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 174/372 (46%), Gaps = 11/372 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLN 196
+AA+ F +S +G P + + ++ L +A + + ++ V Y L++
Sbjct: 196 DAAHKLFVEMSNKG-CPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSV--PVYNALID 252
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD 256
+E AI + + G ++ ++ ++ LC +VE+A F ++ G D
Sbjct: 253 GMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF-AQMFLRGCD 311
Query: 257 --IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
I T ++ G + G +YEA WK +I+ CEP+ V Y T ++ L G L AL++
Sbjct: 312 ANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV 371
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
M G P+V T + +ID + A E M + GC PNV TY ++ LCK
Sbjct: 372 CDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCK 431
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMST 431
+ +++M + C PN +TFN +K L V W +LERM+ +GC +
Sbjct: 432 NSMFDQANSLVEKMTLE--GCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNI 489
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TYN +L + ++ ++E+E + + P+ +Y +++G G + +AL F +
Sbjct: 490 TTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGK 549
Query: 492 MRLKGMVPEPRT 503
++G P+ T
Sbjct: 550 ALVRGTAPDSIT 561
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 190/451 (42%), Gaps = 76/451 (16%)
Query: 127 NVINRYRFD--WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP- 183
+V+ R + D + FF ++ + ++ + +++ LGR + + +M
Sbjct: 43 DVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKM 102
Query: 184 DLVN--EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
D +N E + ++N Y E+A+ +F R EFG + + +LL L ++
Sbjct: 103 DGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQM 162
Query: 242 AETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ + +K+ ++ T NI+L C V A + + ++ C PD+VTY T V+
Sbjct: 163 INPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVS 222
Query: 301 ALTKKGKLG------------------------------TALRLFQAMWEKGRKPDVVTC 330
+L K GK+ A++L M + G P+VV+
Sbjct: 223 SLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSY 282
Query: 331 NCIIDALC-----------------------------------FKKRIPEALEVLREMKN 355
+CII++LC + ++ EAL++ + M
Sbjct: 283 SCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
GC PNV YN+LI LC +E + D+M Q++G CLPN T++ L+ K ++
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM-QRSG-CLPNVTTYSILIDGFAKSGDL 400
Query: 416 PWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
E RM +GC+ + TY ++ + D+ E+M +G P+ ++
Sbjct: 401 VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTF 460
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
I GL GR+E A+ M+ G +P T
Sbjct: 461 IKGLCGNGRVEWAMKLLERMQGHGCLPNITT 491
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 176/396 (44%), Gaps = 51/396 (12%)
Query: 150 GDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEE 206
G + P V+NA++D + + R I++ EM D N +Y ++N + VE
Sbjct: 238 GRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVEL 297
Query: 207 AI-----------------------GVFDRRKEFGELD------------DLSAFQNLLL 231
A G F R K + LD ++ A+ L+
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIH 357
Query: 232 WLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
LC +E A + + +++ ++ T +I+++G+ G++ A W +I C P
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+ VTY V+ L K A L + M +G P+ +T N I LC R+ A+++L
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLL 477
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
M+ GCLPN+TTYN L+ L ++ + E + E+E +N PN +T+N +L
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQ--PNLVTYNTVLYGFS 535
Query: 411 KPEEVPWVLERMER---NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK----KGMG 463
+ + L+ + G + TYN ++ Y + KV+ + +E+ K
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK---QGKVKIAAQLVERVSSMKEWH 592
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
PD +YT +I G + +E+A+++ + +G+ P
Sbjct: 593 PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 16/283 (5%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNV------INRYRFDWE---AAYTFFKWVSREGDY 152
+ + G +E+AL C+ + NV I+ + + A+ T+ + +S
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH--GC 415
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGILLNRYAAAHMVEEAIG 209
P + ++DVL + F + + ++M N T+ + VE A+
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMK 475
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWC 268
+ +R + G L +++ + LL L R E A F E E ++ T N +L G+
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE-KGRKPDV 327
G + EA + + + PDS+TY T ++A K+GK+ A +L + + K PD+
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDI 595
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
+T +I C I EA+ L + N+G PN T+N+L++
Sbjct: 596 ITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 170/376 (45%), Gaps = 37/376 (9%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P F +++ L R R VE + + D M + N+ TYG +++ A+ +
Sbjct: 177 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNL 236
Query: 211 FDRRKEFGELDDLSAFQNLLLW-----------LCRYKHVEVAETFFES--EKNEFGYDI 257
+ +E + N+++W C A+ + E+ + D+
Sbjct: 237 LRKMEEVSHIK-----PNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDV 291
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T N ++N + G +EA+ + +++ P ++TY++ ++ K+ +L A +F
Sbjct: 292 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYL 351
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M KG PD++T N +I C KR+ + +++L EM G + N TY +LI C++
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 411
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMER---------- 424
+ + L EM +G C PN +T N LL L K ++ + + M++
Sbjct: 412 LNAAQDLLQEM-VSSGVC-PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHP 469
Query: 425 -NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
NG + TYN+++ +N + +EEM +G+ PD +Y +IHGL + RL+
Sbjct: 470 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLD 529
Query: 484 DALSYFHEMRLKGMVP 499
+A F M K P
Sbjct: 530 EATQMFDSMGSKSFSP 545
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 175/379 (46%), Gaps = 22/379 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
W A + + SP +NA+++ + +F E +++DEM + + TY
Sbjct: 271 WSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYS 330
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
+++ + + ++ A +F G D+ F L+ CR K V+ E E
Sbjct: 331 SMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH-EMTE 389
Query: 253 FGYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
G T+ +++G+C +G++ A+ ++++ S P+ VT T ++ L GKL
Sbjct: 390 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKD 449
Query: 311 ALRLFQAMWEK-----------GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
AL +F+AM + G +PDV T N +I L + + EA E+ EM +RG +
Sbjct: 450 ALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 509
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
P+ TYNS+I LCK R++ + D M K+ S PN +TF L+ K V L
Sbjct: 510 PDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFS--PNVVTFTTLINGYCKAGRVDDGL 567
Query: 420 E---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
E M R G + TY ++ + + ++EM G+ PD + M+ GL
Sbjct: 568 ELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGL 627
Query: 477 YDKGRLEDALSYFHEMRLK 495
+ K L+ A++ ++++
Sbjct: 628 WSKEELKRAVAMLEDLQMS 646
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 17/290 (5%)
Query: 225 AFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
+F L+ C + A TF + K F + T + +L+G CV + EA D+
Sbjct: 115 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL----DL 170
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
C+P+ VT+ T +N L ++G++ A+ L M E G +P+ +T I+D +C
Sbjct: 171 FHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 230
Query: 344 PEALEVLREMKNRGCL-PNVTTY-----NSLIKHLCKIKRMETVYEYLDEM-EQKNGSCL 396
AL +LR+M+ + PNV + +I C R + L EM E+K S
Sbjct: 231 VSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKIS-- 288
Query: 397 PNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
P+ +T+N L+ + K E + + M G ST TY+ ++ + + D H
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHM 348
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ M KG PD ++ +I G R++D + HEM G+V T
Sbjct: 349 FYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 398
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 15/307 (4%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNI 262
+E+AI +F L + F L+ + R ++V + + E + + I
Sbjct: 59 LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ +C + A + I K P VT++T ++ L + ++ AL LF M
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC--- 175
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
KP+VVT +++ LC + R+ EA+ +L M G PN TY +++ +CK+ +
Sbjct: 176 -KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234
Query: 383 EYLDEMEQKNGSCLPNEIT---------FNYLLKSLKKPEEVPWVLERMERNGCKMSTDT 433
L +ME+ + PN + N S + E + E +ER T
Sbjct: 235 NLLRKMEEVS-HIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVT 293
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
YN ++ +V + ++EM +G+ P +Y+ MI G + RL+ A F+ M
Sbjct: 294 YNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMA 353
Query: 494 LKGMVPE 500
KG P+
Sbjct: 354 TKGCSPD 360
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 124/302 (41%), Gaps = 52/302 (17%)
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+S E G+ +++ + +G+ + + +A + D+++S+ P + + + + + G
Sbjct: 34 KSRDGESGFGGESLKL-RSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMG 92
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+L + L + M + + + ++ C ++P AL ++ G P V T++
Sbjct: 93 RLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFS 152
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERME 423
+L+ LC R+ + +M C PN +TF L+ L + E +L+RM
Sbjct: 153 TLLHGLCVEDRISEALDLFHQM------CKPNVVTFTTLMNGLCREGRVVEAVALLDRML 206
Query: 424 RNG---------------CKM--STDTYNVILKL---------YVNWDCEDKV------- 450
+G CKM + N++ K+ V W E +
Sbjct: 207 EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFC 266
Query: 451 -RHTWEE--------MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
W E +E+K + PD +Y +I+ +G+ +A + EM +G++P
Sbjct: 267 SSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPST 326
Query: 502 RT 503
T
Sbjct: 327 IT 328
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 124/313 (39%), Gaps = 51/313 (16%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+AA F ++ +G SP FN ++ RA+R + I++ EM + + N TY
Sbjct: 343 DAAEHMFYLMATKG-CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 401
Query: 194 LLNRY-------AAAHMVEEAI----------------GVFDRRKEFGELDDLSAFQ--- 227
L++ + AA +++E + G+ D K L+ A Q
Sbjct: 402 LIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 461
Query: 228 -------------------NLLL--WLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNG 266
N+L+ + K +E E + E D T N +++G
Sbjct: 462 MDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHG 521
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C + EA + + + P+ VT+ T +N K G++ L LF M +G +
Sbjct: 522 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 581
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+T +I I AL++ +EM G P+ T +++ L + ++ L+
Sbjct: 582 AITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLE 641
Query: 387 EMEQKNGSCLPNE 399
+++ G L +E
Sbjct: 642 DLQMSVGYQLEDE 654
>gi|357144169|ref|XP_003573197.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g43820-like [Brachypodium distachyon]
Length = 531
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 174/411 (42%), Gaps = 25/411 (6%)
Query: 106 KGEIEKALNQ----CELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNA 161
+ + +AL+ L L + + NV+N A F W P + N
Sbjct: 77 RAALHRALSSTGLDAALALHPEALSNVVNAGNLSGAATVDLFDWAISNAKLPPSLHTCNT 136
Query: 162 ILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
++ LGR + F + + M PD T I+++ A+ + A+ + +
Sbjct: 137 VIRALGRRKFFASIEDALEIMRKNGIFPD---PTTLEIIIDSLVASRQINRAVQLL-KSD 192
Query: 216 EFG-----ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
+FG AF L+ LC+ HV VA + ++ + + D N ++ GW
Sbjct: 193 QFGFGFCQTCHRKVAFSALINCLCQRSHVGVASSLLQAARGDHLDLDKHVYNDVIGGWAR 252
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G V + + FW +++ PD V++ + AL + G+ L++F+ M +G P
Sbjct: 253 FGRVDKLEHFWAMMLEDGLAPDEVSHCHLIEALGRAGQPEEGLKVFEKMVHEGYGPTTTA 312
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I + ++ ++M ++ C PN TY +I+ L + +R+ + +M
Sbjct: 313 YNALIFNFISSGDLDRCIKYYKDMVDKNCPPNSATYCKMIRALLRARRVADALQMFGDMF 372
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ LPN ++ L P + + + GC +S Y ++L +
Sbjct: 373 TRG--VLPNTGDITLFIEPLCTYGPPHAALMIYRKSRKAGCTISLKAYKLLLARLARFGK 430
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
V WEEM++ G D+ Y +++GL + G+L+ A+S E +KG+
Sbjct: 431 SGIVLKIWEEMQESGHPSDKEIYEFIVNGLCNVGKLDAAVSVVEESLMKGI 481
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 15/220 (6%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQA-MWEKG------RKPDVVTCNCIIDALCFKKR 342
PD T +++L ++ A++L ++ + G RK V + +I+ LC +
Sbjct: 164 PDPTTLEIIIDSLVASRQINRAVQLLKSDQFGFGFCQTCHRK---VAFSALINCLCQRSH 220
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ A +L+ + + YN +I + R++ + E+ M ++G P+E++
Sbjct: 221 VGVASSLLQAARGDHLDLDKHVYNDVIGGWARFGRVDKL-EHFWAMMLEDG-LAPDEVSH 278
Query: 403 NYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
+L+++L + PEE V E+M G +T YN ++ +++ D+ +++M
Sbjct: 279 CHLIEALGRAGQPEEGLKVFEKMVHEGYGPTTTAYNALIFNFISSGDLDRCIKYYKDMVD 338
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
K P+ +Y MI L R+ DAL F +M +G++P
Sbjct: 339 KNCPPNSATYCKMIRALLRARRVADALQMFGDMFTRGVLP 378
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 12/229 (5%)
Query: 162 ILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDR-RKEFGEL 220
+++ LGRA + E ++VF++M V+E YG Y A + G DR K + ++
Sbjct: 281 LIEALGRAGQPEEGLKVFEKM---VHEG-YGPTTTAYNALIFNFISSGDLDRCIKYYKDM 336
Query: 221 DDLSAFQN------LLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
D + N ++ L R + V A + F + + + + + C G
Sbjct: 337 VDKNCPPNSATYCKMIRALLRARRVADALQMFGDMFTRGVLPNTGDITLFIEPLCTYGPP 396
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+ A ++ K+ C Y + L + GK G L++++ M E G D I
Sbjct: 397 HAALMIYRKSRKAGCTISLKAYKLLLARLARFGKSGIVLKIWEEMQESGHPSDKEIYEFI 456
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
++ LC ++ A+ V+ E +G Y+ L L ++ ++ET Y
Sbjct: 457 VNGLCNVGKLDAAVSVVEESLMKGICLGRVVYSKLNNRLLEMDKVETAY 505
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 193/407 (47%), Gaps = 26/407 (6%)
Query: 139 AYTFFKWV--SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
A TFF V S D P ++ A++D+L + F + DEM + V+ +
Sbjct: 122 ALTFFHHVVPSLPADSLPA--LYAAMIDLLAKHHHFPLARHLLDEMRERSIPVSSQVILA 179
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGE-LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
++ RY A M EA +F R +E+G + D + +LL L + + A+ F+S K+
Sbjct: 180 IIRRYVRAGMSPEASELFRRMEEYGAGVPDPAVLASLLGALSKKRLAGEAQALFDSYKSV 239
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
F D+ +++ WC G + +A++ + ++ ++ P+ TY + ++A+ + G++ A
Sbjct: 240 FPPDVVLYTTLVHAWCRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQ 299
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L M E G P+ T N I+ A R + L+V +M+ GC P++ TYN L++
Sbjct: 300 ELLCQMMETGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETH 359
Query: 373 CKIKR--METVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGC 427
C + ++ + L +M K C+P+ TFN +LK E + ERM+ C
Sbjct: 360 CGKGQSNLDAAMKVLAKMIAKG--CIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQC 417
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
K + TYN+++KL+ D V ++M+ +G+ P+ +Y +I +G A +
Sbjct: 418 KPNVVTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRGNWRRAHA 477
Query: 488 YFHEM----RLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSL 530
EM LK P V DM + L + Q +K +L L
Sbjct: 478 TLREMVEEKSLKPTKP-------VYDMVLMLLRKAGQLRKHEELVEL 517
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 168/368 (45%), Gaps = 23/368 (6%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + FN +L + + +R+ ++I ++ M PD + T IL+N Y + V+
Sbjct: 89 TPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFI---TLNILINCYCNLNKVDF 145
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
+ V G + F +L+ LC + A + GY ++ T +L
Sbjct: 146 GLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLR-KMVRMGYRPNVVTYGTLL 204
Query: 265 NGWCVLGNVYEAKRFWKDIIKSK------CEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
NG C+ GN A + ++++ +P+ V Y T +++L K G + LF M
Sbjct: 205 NGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEM 264
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
+G PDVV + II +C R A + EM + G PNV T+N LI LCK +M
Sbjct: 265 KGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKM 324
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN 435
E L M Q+ S P+ T+N L+ + ++ + ME G + +YN
Sbjct: 325 EEANHLLKLMIQRGES--PDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYN 382
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
V++ Y + + + EM K + P +Y ++ GL+ +G++ DA + F EM++
Sbjct: 383 VLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVH 442
Query: 496 GMVPEPRT 503
+ PE T
Sbjct: 443 DLTPESCT 450
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 155/328 (47%), Gaps = 9/328 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP +++I+ + R+ +F+EM D N T+ +L++ A +EEA
Sbjct: 270 SPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANH 329
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWC 268
+ + GE D + L+ C ++ A F S E D + N+++NG+C
Sbjct: 330 LLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYC 389
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G + EAK+ +++++ + P +TY T + L ++GK+ A LF M P+
Sbjct: 390 KSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESC 449
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N ++D LC + EA+E+ ++N P++ +N LI LCK +++E E + +
Sbjct: 450 TYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRL 509
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ PN IT+ ++ L K E + ME GC + T+N +++ + D
Sbjct: 510 SHEGLE--PNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQND 567
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
KV +EM +K PD + ++++
Sbjct: 568 EMQKVVELLQEMAEKDFSPDASTISIVV 595
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 174/377 (46%), Gaps = 22/377 (5%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------------PDLV 186
A + + R G Y P + +L+ L + +++ +EM P+LV
Sbjct: 181 ATGLLRKMVRMG-YRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLV 239
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
Y +++ ++++ +F K G D+ A+ +++ +C E A+ F
Sbjct: 240 ---CYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLF 296
Query: 247 ESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+E + ++ T N++++ C G + EA K +I+ PD+ TY T ++ +
Sbjct: 297 NEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLE 356
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G++ A LF +M KG + D V+ N +I+ C R+ EA ++ REM + +P V TY
Sbjct: 357 GRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITY 416
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RM 422
N+L+ L + ++ + EM+ + + P T+N LL L K + +E +
Sbjct: 417 NTLLTGLFREGKVRDAWNLFGEMKVHDLT--PESCTYNILLDGLCKNNHLSEAMELFHYL 474
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
E + + S +N ++ + R + + +G+ P+ +YTVMIHGL G+L
Sbjct: 475 ENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQL 534
Query: 483 EDALSYFHEMRLKGMVP 499
E+A F M KG P
Sbjct: 535 ENAKDLFLGMEEKGCAP 551
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 120/288 (41%), Gaps = 45/288 (15%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
D +N L C+ H++ +E F S N D++ I + +LG V + KR++
Sbjct: 54 DRGQLENFLKSNCKSGHIKRSEAF--SVFNHL-IDMQPTPPISSFNTLLGAVAKIKRYFD 110
Query: 282 DIIKSK------CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
I K PD +T +N K+ L + M +G P+ VT ++
Sbjct: 111 VISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVK 170
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG-- 393
LC RI EA +LR+M G PNV TY +L+ LC + +EM NG
Sbjct: 171 GLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGF 230
Query: 394 --SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
+ PN + + ++ SL K + DK +
Sbjct: 231 GVTIKPNLVCYCTIIDSLCKDGLI--------------------------------DKGK 258
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ EM+ +G+ PD +Y+ +IHG+ GR E A F+EM +G+ P
Sbjct: 259 ELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHP 306
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 10/223 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N +++ ++ R VE +++ EM P ++ TY LL V +A +F
Sbjct: 381 YNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVI---TYNTLLTGLFREGKVRDAWNLFG 437
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
K + + LL LC+ H+ E E F E ++F I+ N +++G C
Sbjct: 438 EMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKAR 497
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ A+ + + EP+ +TY ++ L K G+L A LF M EKG P++VT N
Sbjct: 498 KIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFN 557
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
++ C + + +E+L+EM + P+ +T + ++ L K
Sbjct: 558 TLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSK 600
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 4/208 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEK-TYGILLNRYAAAHMVEEAIGV 210
P +N +L L R + + +F EM DL E TY ILL+ + + EA+ +
Sbjct: 411 PTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMEL 470
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
F + + F L+ LC+ + +E+A F +E ++ T ++++G C
Sbjct: 471 FHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCK 530
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + AK + + + C P+ VT+ T + + ++ + L Q M EK PD T
Sbjct: 531 SGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAST 590
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRG 357
+ ++D L ++ E L +L +G
Sbjct: 591 ISIVVDLLSKDEKYREYLHLLPTFPAQG 618
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 13/183 (7%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVF------DEMPDLVNEKTYGILLNRYAAAHMV 204
D +P S +N +LD L + E +++F D P + + + L++ A +
Sbjct: 443 DLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSI---QIFNCLIDGLCKARKI 499
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNII 263
E A +F+R G ++ + ++ LC+ +E A + F E+ ++ T N +
Sbjct: 500 EIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTL 559
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL---FQAMWE 320
+ G+C + + +++ + PD+ T + V+ L+K K L L F A +
Sbjct: 560 MRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQGQ 619
Query: 321 KGR 323
GR
Sbjct: 620 TGR 622
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 128/246 (52%), Gaps = 5/246 (2%)
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
I T ++NG +G +A + D++ C+PD TY T +N L K G+ A LF+
Sbjct: 45 IVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFK 104
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M E G + +VVT + +I +LC +R+ EAL++ MK + P + TY SLI+ LC
Sbjct: 105 KMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFS 164
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDT 433
R + L+EM N +PN +TFN L+ + K +V VL+ M G + T
Sbjct: 165 RWKEASALLNEMTSLN--IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVT 222
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
YN ++ Y W + R ++ M KG PD SY+++I+G R+++A F+EM
Sbjct: 223 YNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMI 282
Query: 494 LKGMVP 499
+G P
Sbjct: 283 HQGSTP 288
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 174/392 (44%), Gaps = 50/392 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P F +++ LG+ +F + +++FD+M PD + TY ++N A
Sbjct: 43 PTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPD---DYTYTTIINGLCKIGETALA 99
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE------FGY------ 255
G+F + +E G ++ + L+ LC+Y+ V A F K + F Y
Sbjct: 100 AGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQG 159
Query: 256 ------------------------DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
++ T N++++ +C G V A+ K + + EPD
Sbjct: 160 LCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPD 219
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
VTY + + + ++ A +LF M KG KPDV + + +I+ C KRI EA ++
Sbjct: 220 VVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFN 279
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
EM ++G PN +YN+LI LC++ R+ + M NG+ LPN T+ LL K
Sbjct: 280 EMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNM-HTNGN-LPNLYTYAILLDGFCK 337
Query: 412 PEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
+ + M+ K + YN+++ R + E+ G+ P+ +
Sbjct: 338 QGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQI 397
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
YT +I+GL +G L++AL F M G P+
Sbjct: 398 YTTIINGLCKEGLLDEALEAFRNMEDDGCPPD 429
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 11/261 (4%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTY 191
AA K ++ G P +N+++ VE ++FD M PD+ +Y
Sbjct: 203 AAEGVLKTMTEMG-VEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVF---SY 258
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EK 250
IL+N Y A ++EA +F+ G + ++ L+ LC+ + A+ F++
Sbjct: 259 SILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHT 318
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
N ++ T I+L+G+C G + +A R ++ + + +P+ V Y VNA+ K G L
Sbjct: 319 NGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKD 378
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A LF ++ G +P+V II+ LC + + EALE R M++ GC P+ +YN +I+
Sbjct: 379 ARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIR 438
Query: 371 HLCKIKRMETVYEYLDEMEQK 391
+ K + EM +
Sbjct: 439 GFLQHKDESRAVHLIGEMRDR 459
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P ++ +++ +A+R E Q+F+EM N +Y L++ + EA +
Sbjct: 253 PDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDL 312
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF-GYDIKTMNIILNGWCV 269
F G L +L + LL C+ ++ A F + ++ + ++ NI++N C
Sbjct: 313 FKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCK 372
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
GN+ +A+ + ++ +P+ Y T +N L K+G L AL F+ M + G PD +
Sbjct: 373 SGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFS 432
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
N II K A+ ++ EM++RG + + T
Sbjct: 433 YNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 93/218 (42%), Gaps = 5/218 (2%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
P++ T +N + ++ + + G +P +VT +I+ L + +A+E
Sbjct: 7 SPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVE 66
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ +M RGC P+ TY ++I LCKI +ME+ C N +T++ L+ S
Sbjct: 67 LFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEE--AGCQLNVVTYSTLIHS 124
Query: 409 L---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L ++ E + M+ + TY +++ N+ + EM + P+
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ V++ +G++ A M G+ P+ T
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVT 222
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
M+ G PN T N LI C+++R++ + L + + P +TF L+ L K
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQ--PTIVTFTTLINGLGKV 58
Query: 413 EEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+ +E M GC+ TY I+ +++ME+ G + +Y
Sbjct: 59 GKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTY 118
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +IH L R+ +AL F M+ K + P
Sbjct: 119 STLIHSLCKYRRVNEALDIFSYMKAKDISP 148
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 171/353 (48%), Gaps = 19/353 (5%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
Y P + ++ I+ L R + E+I++ + M PD+V Y +++R +V
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVV---IYNTIVDRLCKDRLVN 248
Query: 206 EAIGVFDRRKEFGELDDLSAFQNL---LLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI 262
EA+ +F + K G L + + +L L L R+K E E + D+ ++
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWK--EAFGLLNEMKGGNIMPDLVAFSV 306
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++ C G V EA+ K + + EPD TY T +N + ++ A ++F+ M KG
Sbjct: 307 LIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKG 366
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
R PDV + + +++ C KRI EA ++ EM +RG +P+ +YN+LI LC+ +R
Sbjct: 367 RMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAE 426
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
E +M NG PN +T++ LL L K ++ + ME +G K TYN+++
Sbjct: 427 ELFKDM-HSNGY-PPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMID 484
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ R + E+ KG+ P+ T I G+ G L++A F +M
Sbjct: 485 GMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQM 537
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 153/336 (45%), Gaps = 41/336 (12%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNI 262
+ +A+ F+ L + F L L R KH + + + E +D+ ++ I
Sbjct: 72 INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++N +C L +V IIK EP+ +T++T +N +GK+G A+ LF M +G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191
Query: 323 RKP-----------------------------------DVVTCNCIIDALCFKKRIPEAL 347
KP DVV N I+D LC + + EA+
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+ +MK G LP V TY SLI L + R + + L+EM K G+ +P+ + F+ L+
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM--KGGNIMPDLVAFSVLID 309
Query: 408 SLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
+ K EV +L+ M G + TYN ++ Y + R +E M KG P
Sbjct: 310 IMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMP 369
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D S++++++G R+++A F EM +G++P+
Sbjct: 370 DVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPD 405
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 159/337 (47%), Gaps = 6/337 (1%)
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
G+ R +EL V N +Y I++ E I + + K G D+ +
Sbjct: 175 GKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIY 234
Query: 227 QNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
++ LC+ + V E F + + + T +++G LG EA ++
Sbjct: 235 NTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKG 294
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
PD V ++ ++ + K+G++ A + + M E G +PDV T N +++ C + + E
Sbjct: 295 GNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVE 354
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A +V M ++G +P+V +++ L+ CK KR++ + DEM + +P+ +++N L
Sbjct: 355 ARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRG--LIPDTVSYNTL 412
Query: 406 LKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ L ++P E + + M NG + TY+++L D+ + ME G+
Sbjct: 413 ISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGL 472
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
PD +Y +MI G+ G+ +DA F E+ +KG+ P
Sbjct: 473 KPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQP 509
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 9/273 (3%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE---LIQVFDEMPDLVNEKTYG 192
W+ A+ + + G+ P F+ ++D++ + E +++ EM + TY
Sbjct: 282 WKEAFGLLNEM-KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYN 340
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
L+N Y V EA VF+ G + D+ +F L+ C+ K ++ A+ F+ E
Sbjct: 341 TLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFD-EMTH 399
Query: 253 FGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
G D + N +++G C EA+ +KD+ + P+ VTY+ ++ L+K+G L
Sbjct: 400 RGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQ 459
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A+ LF+AM G KPD+VT N +ID +C + +A E+ E+ +G PN I
Sbjct: 460 AMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTID 519
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
+CK ++ ++ +ME+ + C P + N
Sbjct: 520 GVCKGGLLDEAHKAFRQMEKDD--CSPAQGCIN 550
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 125/269 (46%), Gaps = 13/269 (4%)
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
N+ +A + ++ + P V + +AL + T + L + M G DV++
Sbjct: 71 NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I+ C + VL ++ G PNV T+++LI C ++ E D M +
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190
Query: 392 NGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
PN +++ ++K L K EV +LE M+ GC+ YN I V+ C+D
Sbjct: 191 GYK--PNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTI----VDRLCKD 244
Query: 449 KVR----HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTG 504
++ H + +M+ G+ P +YT +IHGL + GR ++A +EM+ ++P+
Sbjct: 245 RLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAF 304
Query: 505 ILVNDMNIKLKERGEQGKKVIKLTSLGLK 533
++ D+ K E E + +T +G++
Sbjct: 305 SVLIDIMCKEGEVSEARVILKTMTEMGVE 333
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 194/424 (45%), Gaps = 48/424 (11%)
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQ-VFDEMPDL---VNEKTYGILLNRYAAA 201
+++ + PG +NAILD + R ++ V++ + +F EM + N TY IL+ + A
Sbjct: 157 LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTA 216
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV---------------------- 239
+E + F + G L ++ + ++ C+ + +
Sbjct: 217 GNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISY 276
Query: 240 --------------EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
E +E E K + D T N ++NG+C +GN ++A +++K
Sbjct: 277 NVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVK 336
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+ P+ VTY T +N++ K G L A+ M ++G P+ T +ID + + +
Sbjct: 337 NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A ++++EM G P + TYN+LI C + RME L EM ++ +P+ ++++ +
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIER--GFIPDVVSYSTI 454
Query: 406 LKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ + +E+ + M G TY+ +++ +V ++EM G+
Sbjct: 455 ISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGL 514
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQG 521
PD+ +YT +I+ +G L+ AL EM KG P+ T +L+N N + R ++
Sbjct: 515 PPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFN--KQSRTKEA 572
Query: 522 KKVI 525
K+++
Sbjct: 573 KRLL 576
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 167/377 (44%), Gaps = 30/377 (7%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
Y P FN +++ F + + + EM P++V TY L+N A +
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV---TYTTLINSMCKAGNLN 360
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
A+ D+ ++ G + + L+ + ++ A + E +N F I T N ++
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
NG C+LG + +A +++I+ PD V+Y+T ++ + +L A +L M KG
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDV T + +I LC ++R+ E ++ +EM + G P+ TY SLI C ++
Sbjct: 481 PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYN------ 435
DEM QK S P+ +T+N L+ K +E +L ++ + TYN
Sbjct: 541 HDEMIQKGFS--PDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598
Query: 436 ---------VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
++K + ++ E M +KG ++ Y V+IHG G +E A
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658
Query: 487 SYFHEMRLKGMVPEPRT 503
+ + EM G P T
Sbjct: 659 NLYKEMLHSGFAPHSVT 675
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 29/341 (8%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R+ P + ++D + + Q+ EM P ++ TY L+N +
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTII---TYNALINGHCIL 426
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTM 260
+E+A G+ E G + D+ ++ ++ CR + +E A + E D+ T
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+ ++ G C + E +++++ PD VTY + +NA +G L ALRL M +
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KG PD+VT N +I+ + R EA +L ++ +PN TYN+LI + +
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNL----- 601
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
E+ + G C+ + E VLE M + G K++ + YNVI+
Sbjct: 602 --EFKSALALMKGFCMKGLMN------------EADRVLESMLQKGYKLNEEVYNVIIHG 647
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
+ +K + ++EM G P + + LY +G+
Sbjct: 648 HSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 6/165 (3%)
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE-YLDEMEQKNGSCLPNEIT 401
I +AL ++ K+ G +P V +YN+++ + + K+ + E EM + S PN T
Sbjct: 148 INKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVS--PNVYT 205
Query: 402 FNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
+N L++ + + MERNGC + TYN I+ Y + M
Sbjct: 206 YNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMA 265
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
KG+ P+ SY V+I+GL +G++++ EM + VP+ T
Sbjct: 266 LKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 172/359 (47%), Gaps = 13/359 (3%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL--VNEKTYGILLNRYAAAHMVE 205
R+ SP N IL L AR + +FD+M +L VN TY L++ A +++
Sbjct: 38 RDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLD 97
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLW-LCRYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
EA+G+ K G ++ + N+++ LCR + A + + D T ++
Sbjct: 98 EAMGLLLDMKSRG-MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLV 156
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G G + +A + ++++ ++ PD+ T V +L ++ A L + M +G
Sbjct: 157 HGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMA 216
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVL-REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+ +T + ++D LC +R+ EA+ +L E+ RG P++ TY+++I LCK R+ +
Sbjct: 217 ANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD 276
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
+EM SC P IT+N L+ + +E +L +M + C TY ++
Sbjct: 277 IFEEM-----SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSA 331
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ D +++M + PD ++T ++ GL +GR+EDAL E+ +G P
Sbjct: 332 FCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 390
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 144/327 (44%), Gaps = 16/327 (4%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAI----GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
N TY L++ ++EA+ G RR G D+ + ++ LC+ +
Sbjct: 217 ANAITYSALVDGLCKCERLDEAVALLLGEVTRR---GFTPDIVTYSTVIDGLCKAGRLRD 273
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
A FE + T N ++ G+C G++ EA R ++ C PD +TY T ++A
Sbjct: 274 AVDIFE--EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSA 331
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K G+L A LFQ M PDVVT ++D LC + R+ +ALE+L E+ RGC P
Sbjct: 332 FCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 391
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER 421
+ TYN ++ CK ++ E + + + +PN +T+N L+ + L+
Sbjct: 392 IYTYNCVVDGYCKSNQVRKAEELVADFRSRG--FVPNTVTYNILVAGCCRAGRTDQALQY 449
Query: 422 M-----ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
+ E C S Y +IL D +EEM ++G P ++ ++ L
Sbjct: 450 LDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 509
Query: 477 YDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + A EM G P P T
Sbjct: 510 CKAHQPQQAHELLEEMIKYGHTPGPGT 536
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 172/382 (45%), Gaps = 20/382 (5%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
+++ + + R EA SR +PG+ + N ++ L RA R + V+ +M
Sbjct: 86 LIHPLCKARLLDEAMGLLLDMKSR--GMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND 143
Query: 183 ---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV 239
PD + TY L++ + A + +A+ V + D + ++ LC V
Sbjct: 144 AHPPDFL---TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRV 200
Query: 240 EVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEA-KRFWKDIIKSKCEPDSVTYAT 297
+ A E + + T + +++G C + EA ++ + PD VTY+T
Sbjct: 201 DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYST 260
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
++ L K G+L A+ +F+ E P +T N +I C + EA+ +L +M +
Sbjct: 261 VIDGLCKAGRLRDAVDIFE---EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDN 317
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEE 414
C P+V TY +L+ CK+ R++ YE +M S P+ +TF L+ L + E+
Sbjct: 318 CAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLS--PDVVTFTSLVDGLCGEGRMED 375
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+LE + R GC + TYN ++ Y + K + +G P+ +Y +++
Sbjct: 376 ALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVA 435
Query: 475 GLYDKGRLEDALSYFHEMRLKG 496
G GR + AL Y ++ +G
Sbjct: 436 GCCRAGRTDQALQYLDQLNSEG 457
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 161/365 (44%), Gaps = 39/365 (10%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYG 192
R D EA V+R G ++P ++ ++D L +A R + + +F+EM TY
Sbjct: 234 RLD-EAVALLLGEVTRRG-FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYN 291
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
L+ Y A ++EAI + G++ D +
Sbjct: 292 SLIGGYCRAGDMDEAI------RLLGKMVD----------------------------DN 317
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D+ T +++ +C +G + +A ++ ++ +K PD VT+ + V+ L +G++ AL
Sbjct: 318 CAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDAL 377
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L + + +G P + T NC++D C ++ +A E++ + ++RG +PN TYN L+
Sbjct: 378 ELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGC 437
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
C+ R + +YLD++ + G C + + +L +L + ++ E M + G
Sbjct: 438 CRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVP 497
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ T+ ++ + EEM K G P + ++ G ++ A
Sbjct: 498 AAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELA 557
Query: 490 HEMRL 494
E+RL
Sbjct: 558 SELRL 562
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 98/249 (39%), Gaps = 42/249 (16%)
Query: 291 DSVTYATFVNALTKKGKL-GTALRLFQAMWEKGRKPDVVTCNCI---------------- 333
DS T+A + L KL L + ++G PD V N I
Sbjct: 9 DSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMAL 68
Query: 334 ------------------IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
I LC + + EA+ +L +MK+RG P +N +I LC+
Sbjct: 69 FDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRA 128
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTD 432
R+ L Q N + P+ +T+ L+ L K + VL+ M
Sbjct: 129 GRLR---HALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNT 185
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS-YFHE 491
T V+++ D D R EEM +GM + +Y+ ++ GL RL++A++ E
Sbjct: 186 TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGE 245
Query: 492 MRLKGMVPE 500
+ +G P+
Sbjct: 246 VTRRGFTPD 254
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 176/373 (47%), Gaps = 15/373 (4%)
Query: 143 FKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYA 199
FK + G Y G F +++ +R F + QV D M ++ E + ++
Sbjct: 52 FKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACG 111
Query: 200 AAHMVEEAIGVFDR-RKEFGELDDLSAFQNLLLWLCRYKHVEVAETF----FESEKNEFG 254
AH+ EA+ F R + + +F ++L + + A F F + F
Sbjct: 112 KAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQ 171
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T N+I+ C LG + A ++++ C PD TY+T +N L K+ ++ A+ L
Sbjct: 172 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 231
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
M +G P+ VT N +IDAL + A +++ M +GC+PN TYN+LI LC
Sbjct: 232 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 291
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMST 431
+++ L++M + C+PN++T+ ++ L ++ E+ +L ME G K +
Sbjct: 292 KGKLDKALSLLEKM--VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANE 349
Query: 432 DTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
Y+ ++ L+ E+ VR W+EM +KG P+ Y I GL + ++A
Sbjct: 350 YIYSSLISGLFKEGKSENAVR-LWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 408
Query: 491 EMRLKGMVPEPRT 503
EM KG +P T
Sbjct: 409 EMLSKGFLPNAFT 421
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 157/361 (43%), Gaps = 29/361 (8%)
Query: 154 PGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++ L G+ + + L++ + N+ TYG ++N E+ + +
Sbjct: 277 PNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHI 336
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWC 268
+E G+ + + +L+ L + E A ++ E E G ++ ++G C
Sbjct: 337 LMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWK-EMAEKGCKPNVVVYGAFIDGLC 395
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
EA+ ++++ P++ TY++ + KKG A+ +++ M + + +VV
Sbjct: 396 RDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVV 455
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
C+ +++ LC R+ EAL V M G P+V Y+S+IK LC + ++ + EM
Sbjct: 456 CCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 515
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWD 445
+ + P+ +T+N L +L + + + +L M GC + T N+ L
Sbjct: 516 QCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFL------- 568
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTV---MIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
E ++ + P Q ++ L + R AL EM L+ + PEP
Sbjct: 569 ----------ETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPS 618
Query: 503 T 503
T
Sbjct: 619 T 619
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KK 411
++G PN+ TYN +IK LCK+ +++ + EM KN C P+ T++ L+ L ++
Sbjct: 167 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKN--CNPDVFTYSTLMNGLCKERR 224
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVIL-KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+E ++L+ M+ GC + T+NV++ L N D + + M KG P++ +Y
Sbjct: 225 VDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS-RAAKLVDNMFLKGCVPNEVTYN 283
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVI 525
+IHGL KG+L+ ALS +M VP T G ++N + +K + R E G ++
Sbjct: 284 TLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGL-VK-QRRAEDGVHIL 337
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 29/275 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
E A +K ++ +G P V+ A +D L R + E + EM L N TY
Sbjct: 366 ENAVRLWKEMAEKG-CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 424
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE- 252
L+ + ++AI V+ ++ LL LC + A T + E
Sbjct: 425 LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEG 484
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDII--KSKCEPDSVTYATFVNALTKKGKLGT 310
D+ + ++ G C +G+V + + + ++ + K PD VTY NAL ++ L
Sbjct: 485 LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTR 544
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE---------------------ALEV 349
A+ L +M ++G PD +TCN ++ L + P+ AL +
Sbjct: 545 AIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRI 604
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRM-ETVYE 383
+ EM R P +T++ +I+ CK KR+ ET+ E
Sbjct: 605 VEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETIDE 639
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 175/364 (48%), Gaps = 18/364 (4%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L A F+ + PD+V T+G LLN + + +A+ +FDR E G ++
Sbjct: 132 LSLALSFLGKMMKLGHEPDIV---TFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVI 188
Query: 226 FQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ ++ LC+ K V+ A + E + D T N +++G C G +A R +
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMT 248
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K + PD T+ ++A K+G++ A L++ M + PD+VT + +I LC R+
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA ++ M ++GC P+V TY+ LI CK K++E + EM Q+ + N +T+
Sbjct: 309 EAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR--GVVRNTVTYTV 366
Query: 405 LLKS------LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
L++ L EE+ + M G + TYNV+L + +K +M+
Sbjct: 367 LIQGYCRAGKLNVAEEI---FKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG 518
K GM D +Y ++I G+ G + DA + + LKG+ P+ T M + L ++G
Sbjct: 424 KSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWT---YTAMMLGLYKKG 480
Query: 519 EQGK 522
+G+
Sbjct: 481 LRGE 484
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 175/371 (47%), Gaps = 16/371 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A +F + + G + P F ++L+ R R + + +FD M ++ N Y ++
Sbjct: 135 ALSFLGKMMKLG-HEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTII 193
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFG 254
+ + V+ A+ + +R + G D + +L+ LC + A K E
Sbjct: 194 DGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIY 253
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ T N +++ G + EA+ ++++I+ +PD VTY+ + L +L A ++
Sbjct: 254 PDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQM 313
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M KG PDVVT + +I+ C K++ +++ EM RG + N TY LI+ C+
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCR 373
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMST 431
++ E M PN IT+N LL L K E+ +L M+++G
Sbjct: 374 AGKLNVAEEIFKWMVFCGVP--PNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADI 431
Query: 432 DTYNVILKLYVNWDCEDKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TYN+I++ +V W+ + KG+ PD +YT M+ GLY KG +A +
Sbjct: 432 VTYNIIIRGMCK---AGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADAL 488
Query: 489 FHEMRLKGMVP 499
F +M+ G++P
Sbjct: 489 FRKMKEDGILP 499
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 144/299 (48%), Gaps = 6/299 (2%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+++++ +F + L ++ F LL + + K +V +E + +++ T NI
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+LN +C + A F ++K EPD VT+ + +N + ++ AL +F M E G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+P+VV N IID LC K++ AL++L M+ G P+ TYNSLI LC R +
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
+ M ++ P+ TFN L+ + K E + E M R TY++++
Sbjct: 242 RMVSCMTKR--EIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIY 299
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ D+ + M KG PD +Y+++I+G ++E + F EM +G+V
Sbjct: 300 GLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 116/279 (41%), Gaps = 42/279 (15%)
Query: 122 DDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE 181
+ LI + N R W+ A +++ Y P FNA++D + R E ++++E
Sbjct: 225 NSLISGLCNSGR--WDDATRMVSCMTKREIY-PDVFTFNALIDACVKEGRISEAEELYEE 281
Query: 182 M------PDLVNEK--------------------------------TYGILLNRYAAAHM 203
M PD+V TY IL+N Y +
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNI 262
VE + +F + G + + + L+ CR + VAE F+ +I T N+
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNV 401
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+L+G C G + +A D+ KS + D VTY + + K G++ A L+ ++ KG
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKG 461
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
PD+ T ++ L K EA + R+MK G LPN
Sbjct: 462 LTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 27/214 (12%)
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC--------------- 358
L + + EKG + + I LCF +R REM G
Sbjct: 13 LHRNLLEKGNSGTSPSSSFSICGLCFSRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFHM 72
Query: 359 -----LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP-NEITFNYLLKSLKKP 412
LP++ ++ L+ + K+K+ + V YL E Q G +P N T N LL +
Sbjct: 73 VQCRPLPSIADFSRLLSAISKMKKYDVVI-YLWEQMQMLG--IPHNLCTCNILLNCFCRC 129
Query: 413 EEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
++ L +M + G + T+ +L + D + ++ M + G P+ Y
Sbjct: 130 SQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIY 189
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+I GL ++++AL + M + G+ P+ T
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVT 223
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 183/419 (43%), Gaps = 58/419 (13%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMV 204
R+ D +P +N ILDVL + + + V+ M L N T+ IL++ + V
Sbjct: 153 RDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNV 212
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNII 263
++A+ +FD + G L D + ++ LCR K V+ A F+ K+ G D T N +
Sbjct: 213 KDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNAL 272
Query: 264 LNGWCVLGNV-----------------------------YEAKRF------WKDIIKSKC 288
LNG+C+L V + AKR+ ++ +I+
Sbjct: 273 LNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNV 332
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
+PD Y + L + GK+ AL L M E G PD V N +I C + EA
Sbjct: 333 KPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARS 392
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ E+ C PNV TY+ LI +C+ E +EME+ C P+ +TFN L+
Sbjct: 393 LQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKL--GCYPSAVTFNSLIDG 450
Query: 409 LKKP---EEVPWVLERME--RNGC---KMSTDTYNVI----LKLYVNWDCEDKVRH---- 452
L K E+ + +ME RN ++S +V+ L+ V C+ + H
Sbjct: 451 LCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYR 510
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
++ G P +Y ++++G G A F EM+ KG+ P+ T G L+N +
Sbjct: 511 ILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGL 569
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 184/408 (45%), Gaps = 11/408 (2%)
Query: 103 VSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAI 162
+ T +E AL L+ ++ ++I + + + FF W S + + + I
Sbjct: 40 IKTMNPMEPALEPMVPFLSPKIVTSIIQNPP-NPQLGFRFFIWASNFKRFRAWESC-DLI 97
Query: 163 LDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGE 219
D+L Q + + + V+ + +L+ Y + ++A+ F ++F
Sbjct: 98 TDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDC 157
Query: 220 LDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKR 278
D+ + +L L + + +A T + K ++ T +I+++G C GNV +A
Sbjct: 158 TPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALH 217
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
+ ++ + PD+ TY ++ L + ++ A RLF M + G PD VTCN +++ C
Sbjct: 218 LFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFC 277
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
R+ EA +LR + G + +V Y+ LI+ L + KR E V +M + N P+
Sbjct: 278 MLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVK--PD 335
Query: 399 EITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+ ++K L + +V LE M +G T YNV++K + + + R
Sbjct: 336 VYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQL 395
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
E+ + P+ ++Y+++I G+ G DA F+EM G P T
Sbjct: 396 EISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVT 443
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 169/411 (41%), Gaps = 65/411 (15%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+ A++ + ++G Y ++ ++ L RA+R+ ++ ++ +M PD+
Sbjct: 283 DEAFSLLRLFEKDG-YVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVY---L 338
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF-FESE 249
Y I++ A A V +A+ + + E G + D + L+ C + A + E
Sbjct: 339 YTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEIS 398
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+++ ++KT +I+++G C G +A+ + ++ K C P +VT+ + ++ L K G+L
Sbjct: 399 RHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLE 458
Query: 310 TALRLFQAM------------------------------------------------WEK 321
A LF M +
Sbjct: 459 KAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADS 518
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P + T N +++ C A ++ REM+ +G P+ TY +LI L + +R E
Sbjct: 519 GDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDA 578
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVIL 438
Y+ D+ME KNG C P+ + ++ + + E+P + RN + I
Sbjct: 579 YKVFDQME-KNG-CTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIE 636
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ + E VR EM+ K D Y + + GL R+ +AL F
Sbjct: 637 GYFEKQEVEKAVRGLL-EMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIF 686
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 35/124 (28%)
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY--------- 469
LE ++ G K+ D + V++K+Y+ DK T+ M PD +Y
Sbjct: 114 LEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQ 173
Query: 470 --------------------------TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+++I GL G ++DAL F EM +G++P+ T
Sbjct: 174 KNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFT 233
Query: 504 GILV 507
+V
Sbjct: 234 YCVV 237
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 145/297 (48%), Gaps = 9/297 (3%)
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILN 265
I +F + + G DL L+ C H+ +A + F + K F D T+N ++
Sbjct: 77 VISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIK 136
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G + + F ++ + D V+Y T +N L K G+ RL + + KP
Sbjct: 137 GLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKP 196
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DVV N II++LC K + +A +V EM +G P+V TY +LI C + +M+ + L
Sbjct: 197 DVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLL 256
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP------EEVPWVLERMERNGCKMSTDTYNVILK 439
+EM+ KN + P+ TF+ L+ +L K +E + E M+ TYN ++
Sbjct: 257 NEMKLKNIN--PDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLID 314
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ +EM++ G+ PD SYT+++ GL GRLE A +F + +KG
Sbjct: 315 GLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKG 371
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 32/370 (8%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +FN IL L + +R+ +I +F + PDL T IL+N + + A
Sbjct: 56 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLC---TLSILINCFCHQAHITLA 112
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLC--------RYKHVEVAETFFESEKNEFGYDIKT 259
VF + G D L+ LC Y H +V F+ ++ +G
Sbjct: 113 FSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYG----- 167
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
++NG C G R + + +PD V Y T +N+L K LG A ++ M
Sbjct: 168 --TLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 225
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
KG PDVVT +I C ++ EA +L EMK + P+V T++ LI L K + +
Sbjct: 226 VKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKK 285
Query: 380 TVYEYL---DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT 433
V E + +EM+ KN +P+ +T+N L+ L K E +L+ M+ +G + +
Sbjct: 286 MVDEAMSLFEEMKHKN--MIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYS 343
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y ++L + + ++ + KG + Y VMI+GL G +A+ +M
Sbjct: 344 YTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKME 403
Query: 494 LKGMVPEPRT 503
KG +P T
Sbjct: 404 GKGCMPNAIT 413
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 9/284 (3%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAET 244
+++ +YG L+N A + + + + D+ + ++ LC+ K + + +
Sbjct: 161 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDV 220
Query: 245 FFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
+ E D+ T +++G+C++G + EA ++ PD T++ ++AL K
Sbjct: 221 YSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGK 280
Query: 305 KGK---LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+GK + A+ LF+ M K PD+VT N +ID LC + A+ +L+EMK G P+
Sbjct: 281 EGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPD 340
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWV 418
V +Y L+ LCK R+E E+ + K C N +N ++ L K E +
Sbjct: 341 VYSYTILLDGLCKGGRLEIAKEFFQHLLVK--GCHLNVWPYNVMINGLCKAGLFGEAMDL 398
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ME GC + T+ I+ D DK EM +G+
Sbjct: 399 KSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%), Gaps = 19/241 (7%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P + + +++L K + T + LF+ G PD+ T + +I+ C + I A V
Sbjct: 56 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+ RG P+ T N+LIK LC ++ + D++ + +++++ L+ L
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQL--DQVSYGTLINGL 173
Query: 410 KKPEE---VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR----HTWEEMEKKGM 462
K E V +L ++E + K YN I +N C++K+ + EM KG+
Sbjct: 174 CKAGETKAVARLLRKLEGHSVKPDVVMYNTI----INSLCKNKLLGDACDVYSEMIVKGI 229
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
PD +YT +IHG G++++A S +EM+LK + P+ V ++ + G++GK
Sbjct: 230 SPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPD------VYTFSVLIDALGKEGK 283
Query: 523 K 523
K
Sbjct: 284 K 284
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 109/243 (44%), Gaps = 11/243 (4%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
I+N + + + +A + + + + SP + ++ + E + +EM
Sbjct: 204 IINSLCKNKLLGDACDVYSEMIVK--GISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKL 261
Query: 183 ----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
PD+ L + MV+EA+ +F+ K + D+ + +L+ LC+ H
Sbjct: 262 KNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHH 321
Query: 239 VEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
+E A + E E G D+ + I+L+G C G + AK F++ ++ C + Y
Sbjct: 322 LERAIALLK-EMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYN 380
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+N L K G G A+ L M KG P+ +T II AL K +A ++LREM R
Sbjct: 381 VMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIAR 440
Query: 357 GCL 359
G L
Sbjct: 441 GLL 443
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 13/226 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++N I++ L + + + V+ EM PD+V TY L++ + ++EA
Sbjct: 196 PDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV---TYTTLIHGFCIMGKMKEA 252
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCR---YKHVEVAETFFESEKNE-FGYDIKTMNII 263
+ + K D+ F L+ L + K V+ A + FE K++ DI T N +
Sbjct: 253 FSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSL 312
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++G C ++ A K++ + +PD +Y ++ L K G+L A FQ + KG
Sbjct: 313 IDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGC 372
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+V N +I+ LC EA+++ +M+ +GC+PN T+ ++I
Sbjct: 373 HLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTII 418
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 170/359 (47%), Gaps = 10/359 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP + A++D L +A R + ++ F+EM + TY ++++ A M+ +A
Sbjct: 140 SPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACK 199
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK-TMNIILNGWC 268
VF++ + G + D + L+ + ++ A + + T I++G+C
Sbjct: 200 VFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFC 259
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
L + EAK + + CEP + + ++ KG+ A ++ M +G PDV+
Sbjct: 260 KLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVI 319
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+ID L R+PEA V M +GC P+ TY ++I++ KI +E E L+ M
Sbjct: 320 LYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELM 379
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ P+ +N L+ K E V V +RM +G K + T+NV++
Sbjct: 380 AKSGVG--PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG 437
Query: 446 CEDKVRHTWEEM-EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ ++EM EK+ + P SYT++I GL GR+ +A F EM +G++PE T
Sbjct: 438 KTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHT 496
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 6/318 (1%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
+Y ++ A + ++EA +F+ K G ++ A+ ++ L + +E FE
Sbjct: 110 SYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEM 169
Query: 250 KNEFGYDIKTM-NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+T ++++G C + +A + ++ +++ C PD++TY T ++ +K K+
Sbjct: 170 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 229
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A +L M KG +P VT I+ C I EA EV+ +M+ RGC P + + SL
Sbjct: 230 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 289
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERN 425
+ + R E Y+ L EM + C P+ I + L+ L VP V + M
Sbjct: 290 LSYYLSKGRAEEAYQVLTEMTARG--CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK 347
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
GC TY I++ + + E M K G+GPD +Y ++ G R++ A
Sbjct: 348 GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQA 407
Query: 486 LSYFHEMRLKGMVPEPRT 503
+ M G+ P T
Sbjct: 408 FGVYDRMVASGIKPNAVT 425
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 145/349 (41%), Gaps = 37/349 (10%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
+Y +++ A+ ++EA F+ + G D+ AF L+ C+ +V
Sbjct: 9 SYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQA 68
Query: 250 KNEFGYDIKTMNIILNGWCVLGN--------------------------------VYEAK 277
F D+ +++G+C G+ + EA
Sbjct: 69 LKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEAC 128
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
++++ + C P+ V Y ++ L K G++ L+ F+ M P T +ID L
Sbjct: 129 ELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGL 188
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C + +P+A +V +M +GC+P+ TY +LI K +M+ + LD M K P
Sbjct: 189 CKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE--P 246
Query: 398 NEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+T+ ++ K + E V+ +M GC+ + +L Y++ ++
Sbjct: 247 TAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVL 306
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
EM +G PD YT +I L+ GR+ +A F M KG P+ T
Sbjct: 307 TEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 355
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 158/375 (42%), Gaps = 22/375 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + + ++D +A + E ++ D M P V TYG +++ + M+ EA
Sbjct: 211 PDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAV---TYGSIVHGFCKLDMINEA 267
Query: 208 IGVFDRRKEFGELDDLSAFQNLL-LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNG 266
V + +E G L F +LL +L + + E + E D+ +++
Sbjct: 268 KEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDL 327
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
G V EA+ + +I+ C PD++TY T + +K G + A + + M + G PD
Sbjct: 328 LFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 387
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
N ++D +R+ +A V M G PN T+N L+ L K + + +
Sbjct: 388 CFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFK 447
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILKLYVN 443
EM +K P +++ L+ L K V + M G TY ++
Sbjct: 448 EMLEKE-EVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAK 506
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + E+M K G+ PD ++Y+ +I GL D ++ A F EM +G P
Sbjct: 507 AGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAP---- 562
Query: 504 GILVNDMNIKLKERG 518
N++ K+ RG
Sbjct: 563 ----NEVTYKVLRRG 573
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 140/315 (44%), Gaps = 41/315 (13%)
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK-------LG 309
I + N +++G + + EA +F+ +I + CEPD + + T ++ K G+ L
Sbjct: 7 IVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLN 66
Query: 310 TALRLFQ--------------------AMWEKGRKP----DVVTCNCIIDALCFKKRIPE 345
AL+ F+ + + P DV++ +I L KRI E
Sbjct: 67 QALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDE 126
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A E+ E+K GC PNV Y ++I L K R+E + +EM SC+P T+ +
Sbjct: 127 ACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEM--SGSSCVPTRTTYTVV 184
Query: 406 LKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ L K + +P V E+M + GC T TY ++ + D+ R + M KG
Sbjct: 185 IDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGP 244
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKL-KERGEQG 521
P +Y ++HG + +A +MR +G EP I + ++ L K R E+
Sbjct: 245 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGC--EPGLFIFTSLLSYYLSKGRAEEA 302
Query: 522 KKVIKLTSLGLKGNA 536
+V LT + +G A
Sbjct: 303 YQV--LTEMTARGCA 315
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 141/345 (40%), Gaps = 45/345 (13%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
RE PG +F ++L R E QV EM PD++ Y L++ +
Sbjct: 275 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVI---LYTSLIDLLFST 331
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTM 260
V EA VFD E G D + ++ + +VE A E K+ G D
Sbjct: 332 GRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAY 391
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N +++G+ L V +A + ++ S +P++VT+ ++ L K GK A LF+ M E
Sbjct: 392 NSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLE 451
Query: 321 KGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
K P +V+ +ID L R+ EA +EM +RG +P TY SLI L K R+
Sbjct: 452 KEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIP 511
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILK 439
E ++E M + G Y+ ++
Sbjct: 512 ----------------------------------EAKKLVEDMVKLGVNPDVQAYSALIT 537
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
++ D ++EM K+G P++ +Y V+ G GR D
Sbjct: 538 GLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD 582
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
CEP V+Y T ++ L K+ A + F +M + G +PDV+ +I C K P+
Sbjct: 3 CEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFC-KAGQPQVG 61
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
L + P+V Y S+I CK ++T Y + I++ ++K
Sbjct: 62 HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGY-----FRAVTPKASLDVISYTTVIK 116
Query: 408 SL---KKPEEVPWVLERMERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMG 463
L K+ +E + E ++ GC + Y ++ L ED +++ +EEM
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKN-FEEMSGSSCV 175
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
P + +YTV+I GL L DA F +M KG VP+ T
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTIT 215
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 3/188 (1%)
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G +P +V+ N +I L ++ EA + M + GC P+V + +LI CK + +
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
++ L++ ++ P+ + ++ K ++ R + +Y ++K
Sbjct: 62 HKLLNQALKRF---RPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGL 118
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ D+ +EE++ G P+ +YT +I GL GR+ED L F EM VP
Sbjct: 119 ADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTR 178
Query: 502 RTGILVND 509
T +V D
Sbjct: 179 TTYTVVID 186
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 181/389 (46%), Gaps = 27/389 (6%)
Query: 146 VSREGDYSPGSNVFNAILDVLGRARR----------------FVELIQVFDEMPD---LV 186
VSR+G S S+VF ++L+ G + F + IQ F + +
Sbjct: 130 VSRKGKNS-ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQI 188
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
+ G L +R ++ A ++ + G D+ F L+ LC+ + A+ F
Sbjct: 189 PFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLF 248
Query: 247 -ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E K + + N ++NG+C GN+ + R + +++++ PD TY+ +N L K+
Sbjct: 249 GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKE 308
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G+L A +LF M ++G P+ VT +I+ C R +E+ ++M +G P+V TY
Sbjct: 309 GQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITY 368
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RM 422
N+LI LCK+ + + + EM Q+ P++ T+ L+ K ++ LE M
Sbjct: 369 NTLINGLCKVGDLREAKKLVIEMTQRGLK--PDKFTYTMLIDGCCKEGDLESALEIRKEM 426
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+ G ++ + ++ + + T EM + G+ PD +YT++IHG KG +
Sbjct: 427 VKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDV 486
Query: 483 EDALSYFHEMRLKGMVPEPRT-GILVNDM 510
+ EM+ G VP T +L+N +
Sbjct: 487 KTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 125/259 (48%), Gaps = 6/259 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P ++ +++ L + + + ++F EM D + N+ T+ L+N + + + +
Sbjct: 293 PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEI 352
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCV 269
+ + G D+ + L+ LC+ + E + E + D T ++++G C
Sbjct: 353 YQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCK 412
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G++ A K+++K E D+V + ++ ++G++ A R + M E G KPD T
Sbjct: 413 EGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDAT 472
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+I C K + ++L+EM+ G +P V TYN L+ LCK +M+ LD M
Sbjct: 473 YTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAM- 531
Query: 390 QKNGSCLPNEITFNYLLKS 408
N +P++IT+N LL+
Sbjct: 532 -LNLGVVPDDITYNILLEG 549
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 10/228 (4%)
Query: 154 PGSNVFNAILD---VLGRARRFVELIQVF---DEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P F +++ V GRA +E+ Q PD++ TY L+N + EA
Sbjct: 328 PNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVI---TYNTLINGLCKVGDLREA 384
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNG 266
+ + G D + L+ C+ +E A E E K D +++G
Sbjct: 385 KKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISG 444
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C G V EA+R ++++++ +PD TY ++ KKG + T +L + M G P
Sbjct: 445 FCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPG 504
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
VVT N +++ LC + ++ A +L M N G +P+ TYN L++ CK
Sbjct: 505 VVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCK 552
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 134/313 (42%), Gaps = 38/313 (12%)
Query: 223 LSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNVYEAKRFW 280
LS Q+LL ++ K A + F S G + ++++N + G +A + +
Sbjct: 119 LSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCF 178
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+ + K + + + L K A ++ + + G PDV N ++ LC +
Sbjct: 179 RLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKE 238
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK---------IKR--MET-----VYEY 384
+I EA + E+ RG P V ++N+LI CK +KR ME V+ Y
Sbjct: 239 HKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTY 298
Query: 385 ------------LDE-----MEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMER 424
LD+ +E + +PN++TF L+ + + + ++M R
Sbjct: 299 SVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLR 358
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G K TYN ++ + + EM ++G+ PD+ +YT++I G +G LE
Sbjct: 359 KGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLES 418
Query: 485 ALSYFHEMRLKGM 497
AL EM +G+
Sbjct: 419 ALEIRKEMVKEGI 431
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 132/258 (51%), Gaps = 6/258 (2%)
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKL 308
K +++ T N +L G V +A +K +++ K CEP+ V Y T +N L+K+G
Sbjct: 125 KTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHT 184
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
L L + M + KPDV T + +IDALC + A+ +L EMK + PN+ TYNSL
Sbjct: 185 EKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSL 244
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN 425
I LCK+ + E V L EM N + PN TF+ L+ L K E+ V+ M
Sbjct: 245 IDGLCKLGQWEKVKTLLSEMVNLNIN--PNVHTFSILIDGLCKEGKVEDADEVMRHMIEK 302
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G + TY+ I+ Y D+ R + + KG+ P+ SY+++I+G K L A
Sbjct: 303 GVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKA 362
Query: 486 LSYFHEMRLKGMVPEPRT 503
+ F E+ KG+ P+ T
Sbjct: 363 MQLFGEISQKGLKPDTVT 380
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 186/413 (45%), Gaps = 45/413 (10%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILL 195
A FK + RE P ++ +++ L G + + L+++ ++ + +TY I++
Sbjct: 151 AVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVI 210
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFG 254
+ ++ AI + + K+ ++ + +L+ LC+ E +T N
Sbjct: 211 DALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNIN 270
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T +I+++G C G V +A + +I+ EPD +TY+ ++ +G++ A R+
Sbjct: 271 PNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRV 330
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F + +KG KP++ + + +I+ C KK + +A+++ E+ +G P+ TY++++ L +
Sbjct: 331 FNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIE 390
Query: 375 IKRMETVYEYLDEMEQKNGS---CLPNEITFNYLLKSLKKPEEVPWVLERMERN------ 425
+ R+ + DEM + + CL + + F Y L EE + ++ERN
Sbjct: 391 VGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLV--EEAMLLFSKLERNREDTNI 448
Query: 426 -----------------------------GCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
G TYNV++ + D+V+ +
Sbjct: 449 SFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRK 508
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM-VPEPRTGILVN 508
ME G + +Y V++ G + ++ + +S+ EM +G TG+L+N
Sbjct: 509 MEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLIN 561
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 188/400 (47%), Gaps = 21/400 (5%)
Query: 118 LTLTDDLIVNVINRY--RFDWEAAYTFFKWVSREGDYSPGSNV-FNAILDVLGRARRFVE 174
+ ++D ++ V N Y R + A++ + G P + V FN +L L + +
Sbjct: 93 IPISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTG--IPFNVVTFNTLLGGLFAENKVTD 150
Query: 175 LIQVFDEM-------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
+ +F ++ P NE YG ++N + E+ + + ++ D+ +
Sbjct: 151 AVVLFKKLVREKICEP---NEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYS 207
Query: 228 NLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
++ LC+ +++ A E ++ +I T N +++G C LG + K +++
Sbjct: 208 IVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNL 267
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
P+ T++ ++ L K+GK+ A + + M EKG +PD++T + I+D C + ++ A
Sbjct: 268 NINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRA 327
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
V ++++G PN+ +Y+ LI CK K + + E+ QK P+ +T++ +L
Sbjct: 328 RRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQK--GLKPDTVTYSTIL 385
Query: 407 KSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
L + + + + M R G ++ +L Y + ++ + ++E+
Sbjct: 386 HGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNRED 445
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ YTV+I+GL R+ +A + F ++ G++P+ RT
Sbjct: 446 TNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRT 485
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 169/350 (48%), Gaps = 17/350 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMV 204
++ + P +N+++D L + ++ ++ + EM +L N T+ IL++ V
Sbjct: 230 KQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKV 289
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNII 263
E+A V E G D+ + ++ C V+ A F +++ +I + +I+
Sbjct: 290 EDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSIL 349
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+NG+C N+ +A + + +I + +PD+VTY+T ++ L + G++G A ++F M G
Sbjct: 350 INGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGP 409
Query: 324 KPDVVTCNCIIDALCFK----KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
PD+ C+ L F + EA+ + +++ N++ Y +I LCK R+
Sbjct: 410 TPDI----CLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVR 465
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNV 436
+ +++ +P+ T+N ++ + +EV +L +ME NGC + TYNV
Sbjct: 466 EAHAIFEKLPSI--GLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNV 523
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
I++ + + ++ +EM +G D + V+I+ L + + D +
Sbjct: 524 IMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVDMI 573
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 10/234 (4%)
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYA 199
V R+ P ++ +++ + + + +Q+F E+ PD V TY +L+
Sbjct: 333 VLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTV---TYSTILHGLI 389
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIK 258
+ +A +FD G D+ LL +Y VE A F E+N +I
Sbjct: 390 EVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNIS 449
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
+++NG C V EA ++ + PD TY + ++G + + M
Sbjct: 450 FYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKM 509
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ G + +T N I+ +I E + ++EM RG + TT LI L
Sbjct: 510 EDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 6/222 (2%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + +++ K P + ++ + + LF+ M G N +
Sbjct: 45 DAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVT 104
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL-CKIKRMETVYEYLDEMEQKNG 393
++ C + RI A VL G NV T+N+L+ L + K + V + + +K
Sbjct: 105 NSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK-- 162
Query: 394 SCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
C PNE+ + ++ L K E+ +L ME+ K TY++++ D
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ EM++K + P+ +Y +I GL G+ E + EM
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEM 264
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 8/197 (4%)
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L A+ LF M P V+ + + + K + + REM+ G + + N
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLP-NEITFNYLLKSL---KKPEEVPWVLERME 423
+ C R++ + L + K G +P N +TFN LL L K + + +++
Sbjct: 103 VTNSYCLRHRIDCAFSVL-PIYLKTG--IPFNVVTFNTLLGGLFAENKVTDAVVLFKKLV 159
Query: 424 RNG-CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
R C+ + Y ++ +K ME+ PD R+Y+++I L L
Sbjct: 160 REKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINL 219
Query: 483 EDALSYFHEMRLKGMVP 499
+ A++ +EM+ K + P
Sbjct: 220 DAAINLLNEMKQKNIPP 236
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 182/374 (48%), Gaps = 13/374 (3%)
Query: 128 VINRY--RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD- 184
V+N Y + A TF + EG + P SN FN +L +L R+ F + +F+E+
Sbjct: 95 VVNAYVHSHSTDQALTFLHHMIHEG-HVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSK 153
Query: 185 -LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE 243
+++ ++GI++ A + + +EFG ++ + L+ C+ +V +A+
Sbjct: 154 VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAK 213
Query: 244 TFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
F + N G + T ++++NG+ G E + ++++ +S P++ Y ++
Sbjct: 214 NLF-CKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISE 272
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
G + A ++F M EKG V+T N +I LC K+ EA++++ ++ G PN
Sbjct: 273 YCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPN 332
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE- 420
+ TYN LI C +++M++ ++++ S P +T+N L+ K E + L+
Sbjct: 333 IVTYNILINGFCDVRKMDSAVRLFNQLKSSGLS--PTLVTYNTLIAGYSKVENLAGALDL 390
Query: 421 --RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
ME S TY +++ + + +K MEK G+ PD +Y+V++HGL
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCV 450
Query: 479 KGRLEDALSYFHEM 492
G +++A F +
Sbjct: 451 HGNMKEASKLFKSL 464
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 141/330 (42%), Gaps = 7/330 (2%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y ++N Y +H ++A+ G + + F NLL L R + + A F K
Sbjct: 92 YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK 151
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
++ D + I++ G C G + R + + P+ V Y T ++ K G +
Sbjct: 152 SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVML 211
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP-EALEVLREMKNRGCLPNVTTYNSLI 369
A LF M G P+ T + +++ FK+ + E ++ MK G +PN YN LI
Sbjct: 212 AKNLFCKMNRLGLVPNPHTYSVLMNGF-FKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
C ++ ++ EM +K +C +T+N L+ L KK E ++ ++ + G
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIAC--GVMTYNILIGGLCRGKKFGEAVKLVHKVNKVG 328
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ TYN+++ + + D + +++ G+ P +Y +I G L AL
Sbjct: 329 LSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGAL 388
Query: 487 SYFHEMRLKGMVPEPRTGILVNDMNIKLKE 516
EM + + P T ++ D +L
Sbjct: 389 DLVKEMEERCIAPSKVTYTILIDAFARLNH 418
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 143/355 (40%), Gaps = 38/355 (10%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E SP ++ ++D + + +F +M L N TY +L+N + +
Sbjct: 186 EFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQR 245
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
E +++ K G + + A+ L+ C V+ A + F E + + T NI++
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILI 305
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G C EA + + K P+ VTY +N K+ +A+RLF + G
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLS 365
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P +VT N +I + + AL++++EM+ R P+ TY LI ++ E E
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEM 425
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
ME+ +P+ T++ LL L C ++ N
Sbjct: 426 HSLMEKS--GLVPDVYTYSVLLHGL-----------------C------------VHGNM 454
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
K+ + EM + P+ Y MIHG +G AL +EM GMVP
Sbjct: 455 KEASKLFKSLGEMH---LQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVP 506
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N +++ R+ +++F+++ P LV TY L+ Y+ VE
Sbjct: 330 SPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLV---TYNTLIAGYSK---VEN 383
Query: 207 AIGVFDRRKEFGE---LDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNI 262
G D KE E + L+ R H E A E EK+ D+ T ++
Sbjct: 384 LAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSV 443
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+L+G CV GN+ EA + +K + + +P+SV Y T ++ K+G ALRL M + G
Sbjct: 444 LLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSG 503
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
P+V + I LC ++ EA +L +M N G P+V+ Y
Sbjct: 504 MVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 175/371 (47%), Gaps = 19/371 (5%)
Query: 123 DLIVNVINRY-RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE 181
++++N +R R D+ A++ + + G + P + F+++++ L +F ++ FDE
Sbjct: 123 NILINCFSRLQRVDF--AFSVLGKIIKLG-FEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 182 M------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
M P+L TY ++ + A+G+ + + G D+ + ++ LC+
Sbjct: 180 MVASGYQPNL---HTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK 236
Query: 236 YKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ V E + F E + D+ T +I+++G C EA + +++ PD VT
Sbjct: 237 DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVT 296
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
+ V+ L K+G L A + + M EKG +P+ T N +++ C + ++ EA V M
Sbjct: 297 FNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMI 356
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE- 413
+GC+PNV +YN LI CK +R++ E DEM + +PN +N L+ L +
Sbjct: 357 TKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRG--LIPNTFNYNTLISGLCQAGR 414
Query: 414 --EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
E + + M+ GC T ++L D + M+ + P+ +Y +
Sbjct: 415 HCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDI 474
Query: 472 MIHGLYDKGRL 482
+I +Y G++
Sbjct: 475 LIRAMYKSGKI 485
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 168/364 (46%), Gaps = 11/364 (3%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGVFDRRK 215
F+ +L L R + + ++ + + L E+ + IL+N ++ V+ A V +
Sbjct: 87 FDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKII 146
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G D F +L+ LC A FF+ E GY ++ T N I+ G+C +G
Sbjct: 147 KLGFEPDAVTFSSLINGLCFEDKFARAMEFFD-EMVASGYQPNLHTYNTIIKGFCKIGKT 205
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
A K + K+ PD V Y T ++ L K + AL +F + KG +PDV T + +
Sbjct: 206 TVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSIL 265
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
+ LC + EA + EM + +P+V T+N L+ LCK + + M +K
Sbjct: 266 MHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGV 325
Query: 394 SCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
PN T+N L+ K E V + M GC + +YN+++ Y D+
Sbjct: 326 E--PNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEA 383
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDM 510
R ++EM +G+ P+ +Y +I GL GR +A F +M+ +G P+ T ++ D
Sbjct: 384 RELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDS 443
Query: 511 NIKL 514
KL
Sbjct: 444 LCKL 447
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 149/335 (44%), Gaps = 41/335 (12%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+E+A+ F+ L + F LL L R KH + + E D+ NI
Sbjct: 65 IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL-------------------- 302
++N + L V A IIK EPD+VT+++ +N L
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184
Query: 303 ---------------TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
K GK A+ L + M + G +PD+V N IID LC + + EAL
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
++ E+K +G P+V TY+ L+ LC + E +EM N +P+ +TFN L+
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLN--IMPDVVTFNILVD 302
Query: 408 SLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
L K E +++ M G + + TYN ++ Y + + R ++ M KG P
Sbjct: 303 KLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMP 362
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ SY ++I+G R+++A F EM +G++P
Sbjct: 363 NVVSYNILINGYCKAQRIDEARELFDEMSFRGLIP 397
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 14/251 (5%)
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C L N+ +A + +I P V + ++AL + GT L L + + + DV
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
N +I+ +R+ A VL ++ G P+ T++SLI LC + E+ DE
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 388 MEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
M PN T+N ++K + K +L++M++ G + YN I ++
Sbjct: 180 MVASGYQ--PNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTI----IDG 233
Query: 445 DCEDKVRH----TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
C+D++ + E++ KG+ PD +Y++++HGL + + E+A + F+EM ++P+
Sbjct: 234 LCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPD 293
Query: 501 PRT-GILVNDM 510
T ILV+ +
Sbjct: 294 VVTFNILVDKL 304
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 60/272 (22%)
Query: 69 LVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNV 128
L+H L NSD+K E + +++N+ + T ++ ++K + L+ +I +
Sbjct: 265 LMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI----LVDKLCKEGMLSEAQGIIKIM 320
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---L 185
I E P +N++++ + E VFD M +
Sbjct: 321 I-------------------EKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
N +Y IL+N Y A ++EA +FD +F+ L+
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEM----------SFRGLI--------------- 396
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
N F Y N +++G C G EA+ +KD+ C PD VT +++L K
Sbjct: 397 ----PNTFNY-----NTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKL 447
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
G L ALRLF+AM + KP++VT + +I A+
Sbjct: 448 GYLDNALRLFRAMQDSCLKPNLVTYDILIRAM 479
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 161/357 (45%), Gaps = 9/357 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + A++ L R + I ++ +M + N TY L+N A+ +
Sbjct: 378 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 437
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCV 269
F + G L + + ++ LC +E A FE K + T N ++NG+
Sbjct: 438 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 497
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
GNV A R + ++ CEPD TY V+ +K GKL +A FQ M E G P+ V+
Sbjct: 498 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 557
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ID ++ AL +L M+ GC PNV +YN++I L K R + D+M
Sbjct: 558 YTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMA 617
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDC 446
++ LPN IT+ L+ L + + + ME+ C + TY+ ++
Sbjct: 618 EQ--GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 675
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ +EME+KG+ PD+ ++T +I G GR++ A M G P RT
Sbjct: 676 ADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRT 732
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 223/511 (43%), Gaps = 51/511 (9%)
Query: 28 TQFSK--LQSCNS--------VTSHKTLIPIINLQARNSEFLFLGRIETAQLVHSLANSD 77
TQF K + SC++ + +H +++LQ +S FL + A
Sbjct: 22 TQFKKTFISSCSTTHERFSHEMVNHLKSPCLVHLQNHSSVLGFLNFSSKPHISSHFAVPA 81
Query: 78 EKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWE 137
+ FQ I V IL V KG E L Q L + ++ ++ D E
Sbjct: 82 SREPFQ-----AIVSRVCAILS--RVQWKGSSE--LKQLSPQLKAHHVAEIVAVHK-DTE 131
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV-------------FDEMPD 184
+ FF W+S+ Y N F ++L+ L R R F + + D
Sbjct: 132 SVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVAD 191
Query: 185 LVNEKT---YGI-------LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
+NE + +G LL + A MVE A ++ + G L F L+ L
Sbjct: 192 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 251
Query: 235 RYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ V AE + + D+ T ++ G C N+ A + ++K C+P+SV
Sbjct: 252 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 311
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY+T +N L +G++ AL + + M EKG +P V T I ALC + EA+E++ M
Sbjct: 312 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 371
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---K 410
K RGC PNV TY +LI L ++ ++E +M ++ +PN +T+N L+ L
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE--GLVPNTVTYNALINELCVGG 429
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+ + ME +G +T TYN I+K L + D E K +E+M K G P +Y
Sbjct: 430 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIE-KAMVLFEKMLKMGPLPTVVTY 488
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+I+G KG + +A M+ G P+
Sbjct: 489 NTLINGYLTKGNVNNAARLLDLMKENGCEPD 519
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 172/374 (45%), Gaps = 18/374 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE----LIQVF--DEMPDLVNEKT 190
E A +K + G P FN ++++L + + E L Q+F D PD+ T
Sbjct: 222 EGARNLYKQMLNSG-IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVF---T 277
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y L+ + ++ A GVFDR + G + + L+ LC V+ A E E
Sbjct: 278 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLE-EM 336
Query: 251 NEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
E G + + T + + C + + EA + K C P+ TY ++ L++ GKL
Sbjct: 337 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 396
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A+ L+ M ++G P+ VT N +I+ LC R AL++ M+ G L N TYN +
Sbjct: 397 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 456
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERN 425
IK LC +E ++M K G LP +T+N L+ V +L+ M+ N
Sbjct: 457 IKGLCLGGDIEKAMVLFEKM-LKMGP-LPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 514
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
GC+ TYN ++ + W + ++EM + G+ P+ SYT +I G G+++ A
Sbjct: 515 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIA 574
Query: 486 LSYFHEMRLKGMVP 499
LS M G P
Sbjct: 575 LSLLERMEEMGCNP 588
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 11/311 (3%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N +Y L++ ++ V+ A+ + +R +E G ++ ++ ++ L + AE
Sbjct: 554 NPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 613
Query: 247 ESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ + ++ T +++G C G A + + D+ K KC P+ TY++ + L ++
Sbjct: 614 DKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 673
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK A L + M KG PD VT +ID RI A +LR M + GC PN TY
Sbjct: 674 GKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTY 733
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERN 425
+ L+K L K + E + + S P+E N+ E V +L RM
Sbjct: 734 SVLLKGL--QKECLLLEEKVAVQHEAVYSFSPHEKDVNF--------EIVSNLLARMSEI 783
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
GC+ + DTY+ ++ + ++M+++G PD+ Y ++ ++ A
Sbjct: 784 GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHA 843
Query: 486 LSYFHEMRLKG 496
L FH + KG
Sbjct: 844 LKIFHSIEAKG 854
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 140/351 (39%), Gaps = 68/351 (19%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P +NA+++ L + RF E ++ D+M + L N TY L++ + A
Sbjct: 587 NPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFK 646
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYD------------ 256
+F ++ L +L + +L+ LC+ + AE E E+ D
Sbjct: 647 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV 706
Query: 257 -----------------------IKTMNIILNGW---CVL---------GNVYEAKRFWK 281
+T +++L G C+L VY K
Sbjct: 707 VLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEK 766
Query: 282 DI---IKSK---------CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
D+ I S CEP TY+T V+ L +KG+ A +L + M E+G PD
Sbjct: 767 DVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 826
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
++ A C + AL++ ++ +G +++ Y +LI LCK ++E D M
Sbjct: 827 YYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNML 886
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVI 437
+K + +EI + L+ L K E+ +L ME + TY ++
Sbjct: 887 EKEWN--ADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 119/280 (42%), Gaps = 20/280 (7%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILD---VLGRARRFVELIQVFDEMPDLVNEKTYGI 193
+ A K + R+G +P F +++D VLGR L++ ++ N +TY +
Sbjct: 677 DEAEILLKEMERKG-LAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSV 735
Query: 194 LLNRYAA-AHMVEEAIGV-FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
LL ++EE + V + F + F+ + L R + T
Sbjct: 736 LLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPT------- 788
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T + +++G C G YEA++ KD+ + PD Y + + A K ++ A
Sbjct: 789 -----LDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHA 843
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L++F ++ KG + + +I ALC ++ EA + M + + + L+
Sbjct: 844 LKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDG 903
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
L K ++ + L ME KN + PN T+ L + L +
Sbjct: 904 LLKEGELDLCMKLLHIMESKNFT--PNIQTYVILGRELSR 941
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 137/552 (24%), Positives = 225/552 (40%), Gaps = 77/552 (13%)
Query: 4 RFRQLKRIYREHFQQK--------FKFHSQLTTQFSKLQSCNSVTSHKTLIPIINLQARN 55
RF Q + H Q F H + SKL S ++V S N
Sbjct: 8 RFSQAHLLLPFHSPQPPCPYNSGIFHPHLRPPPHASKLGSTSTVGS-------------N 54
Query: 56 SEFLFLGRI--ETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTC--SVSTKGEIEK 111
S ++F I E + ++ L++ + Q P V ILK SV+ + ++
Sbjct: 55 SRWVFTTPIPPEWVEPLYDLSDLASNPQPQPSPW------VNQILKLLDGSVNMESNLDS 108
Query: 112 ALNQCELTLTDDLIVNVI--NRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRA 169
++ + L+ + + V+ + R + A+ FF W ++ +Y + +++DVL +
Sbjct: 109 YCSKFLIKLSPNFVAFVLKSDAIRGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLS 168
Query: 170 RRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
F + +F E + L+ L+ + A MVEE + V+ R KE G L F
Sbjct: 169 SDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTF 228
Query: 227 QNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
LL L +E AE FE E + G D+ + N ++ G+C GN +A + D+ K
Sbjct: 229 NFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEK 288
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
EPD +TY T + A +G + L L+Q M E+G + + +I LC R E
Sbjct: 289 RNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVE 348
Query: 346 ALEVLREMKNRGCLPNVTTYNSLI-----------------------------------K 370
V M +GC NV Y +LI
Sbjct: 349 GSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVN 408
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGC 427
LCK R++ EY + K+ N + ++ L+ L K +E E M GC
Sbjct: 409 GLCKSGRLDEAVEYFEFC--KDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGC 466
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ YN ++ ++ ++ MEK+G +YT++I GL+ + R E+AL
Sbjct: 467 PQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALK 526
Query: 488 YFHEMRLKGMVP 499
+ M KG+ P
Sbjct: 527 LWDLMIDKGITP 538
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 165/371 (44%), Gaps = 22/371 (5%)
Query: 145 WVSR---EGDYSPGSNVFNAILDVL------GRARRFVELIQVFDEMPDLVNEKTYGILL 195
WV R E P FN +L+ L A R E+++ PD+V +Y ++
Sbjct: 211 WVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVV---SYNTMI 267
Query: 196 NRYAAAHMVEEAIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG 254
Y A ++A+ F D K E D ++ L+ C + + E E G
Sbjct: 268 KGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLT--LIQACYSEGNFDSCLHLYQEMEERG 325
Query: 255 YDIK--TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+I ++++ G C G E ++++ K C+ + Y ++A K G + A+
Sbjct: 326 LEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAI 385
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
LF+ M +G +PD VT I++ LC R+ EA+E K+ N Y+SLI L
Sbjct: 386 NLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGL 445
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKM 429
K R++ ++ +EM ++ C + +N L+ +L K EE + +RME+ GC
Sbjct: 446 GKAGRVDEAEKFFEEMVERG--CPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQ 503
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ TY +++ ++ W+ M KG+ P S+ + GL G++ A
Sbjct: 504 TVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKIL 563
Query: 490 HEMRLKGMVPE 500
E+ G++PE
Sbjct: 564 DELAPMGVIPE 574
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 15/262 (5%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
++ A++D G+ E I +F+ M PD V TYG+++N + ++EA+ F
Sbjct: 367 IYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDV---TYGVIVNGLCKSGRLDEAVEYF 423
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKTMNIILNGWCV 269
+ K+ + + +L+ L + V+ AE FFE E E G D N +++
Sbjct: 424 EFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFE-EMVERGCPQDSYCYNALIDALAK 482
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA +K + K C+ TY ++ L K+ + AL+L+ M +KG P +
Sbjct: 483 SGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTAS 542
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ LC ++ A ++L E+ G +P T + +I LCK R E + D +
Sbjct: 543 FRALSVGLCLSGKVARACKILDELAPMGVIPE-TAFEDMINVLCKAGRTEQACKLADGIV 601
Query: 390 QKNGSCLPNEITFNYLLKSLKK 411
+ G +P + L+ +L+K
Sbjct: 602 DR-GREVPGRVR-TILINALRK 621
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 84/221 (38%), Gaps = 43/221 (19%)
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV-TCNC---IIDALCFKKR 342
K P+ V + +A+ +GK A R F W G++ + + C +ID L
Sbjct: 116 KLSPNFVAFVLKSDAI--RGKPDIAFRFF---WWAGKQKNYIHKIECYVSLIDVLSLSSD 170
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ E K +G L V NSLI+
Sbjct: 171 FDRVRCIFGEFKEKGFLMTVFAANSLIRSF------------------------------ 200
Query: 403 NYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+L EE+ WV RM+ +G + S T+N +L VN + +E ME +
Sbjct: 201 ----GALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKI 256
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
GPD SY MI G G + A+ F +M + + P+ T
Sbjct: 257 GPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKIT 297
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 193/425 (45%), Gaps = 46/425 (10%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
T +++N R R A++ + + G Y P + +FN +L+ L R E +++ D
Sbjct: 125 TLSIMINCFCRCR-KLSYAFSTMGKIMKLG-YEPDTVIFNTLLNGLCLECRVSEALELVD 182
Query: 181 EM------PDLV--------------------------------NEKTYGILLNRYAAAH 202
M P L+ NE TYG +LN +
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
A+ + + +E D + ++ LC+ ++ A F E E F DI T N
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++ G+C G + + +D+IK K P+ VT++ +++ K+GKL A +L + M ++
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P+ +T N +ID C + R+ EA++++ M ++GC P++ T+N LI CK R++
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
E EM + + N +T+N L++ K E + + M + +Y ++L
Sbjct: 423 LELFREMSLR--GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ +K + ++EK M D Y ++IHG+ + +++DA F + LKG+
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 499 PEPRT 503
+ R
Sbjct: 541 LDARA 545
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 139/303 (45%), Gaps = 6/303 (1%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
++A+ +F + L + F L + + K E+ + E + I T++I+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N +C + A I+K EPD+V + T +N L + ++ AL L M E G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
KP ++T N +++ LC ++ +A+ ++ M G PN TY ++ +CK + E
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKL 440
L +ME++N + + ++ ++ L K + + ME G K TYN ++
Sbjct: 250 LLRKMEERNIKL--DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ N D +M K+ + P+ +++V+I +G+L +A EM +G+ P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 501 PRT 503
T
Sbjct: 368 TIT 370
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 144/324 (44%), Gaps = 12/324 (3%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP 183
LI N R+D + A + R+ SP F+ ++D + + E Q+ EM
Sbjct: 304 LIGGFCNAGRWD-DGAKLLRDMIKRK--ISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 184 D---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
N TY L++ + + +EEAI + D G D+ F L+ C+ ++
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 241 VA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
E F E + T N ++ G+C G + AK+ +++++ + PD V+Y +
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ L G+L AL +F + + + D+ II +C ++ +A ++ + +G
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW-- 417
+ YN +I LC+ + +M ++ + P+E+T+N L+++ ++
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHA--PDELTYNILIRAHLGDDDATTAA 598
Query: 418 -VLERMERNGCKMSTDTYNVILKL 440
++E M+ +G T +++ +
Sbjct: 599 ELIEEMKSSGFPADVSTVKMVINM 622
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 45/262 (17%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + +N+++D + R E IQ+ D M PD++ T+ IL+N Y A+ +++
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM---TFNILINGYCKANRIDD 421
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
+ +F G + + + L+ C+ +EVA+ F E DI + I+L+
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCE-----------------------------P------ 290
G C G + +A + I KSK E P
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D+ Y ++ L +K L A LF+ M E+G PD +T N +I A A E++
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELI 601
Query: 351 REMKNRGCLPNVTTYNSLIKHL 372
EMK+ G +V+T +I L
Sbjct: 602 EEMKSSGFPADVSTVKMVINML 623
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 167/349 (47%), Gaps = 11/349 (3%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD 184
++ V +R R + A +F+ + + G P + ++ ++ R +E +++ DEM +
Sbjct: 264 LIAVFSRNR-HLDQALVYFRDMKKFG-LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLE 321
Query: 185 ---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+++ Y +LN M+ +A +FD E G L D F L+ C+ ++
Sbjct: 322 QGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTK 381
Query: 242 AETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A + F + + DI N +++G+C +G + +A W +I K P+ +TY +N
Sbjct: 382 ALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILIN 441
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A G + A RL+ M EKG KP +VTCN +I C +A E L M +G P
Sbjct: 442 AYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAP 501
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPW 417
+ +YN+LI + M+ + ++++ME++ LP+ IT+N ++ + +E
Sbjct: 502 DHISYNTLINGFVREDNMDKAFLWINKMEKE--GLLPDIITYNVVMNGFCRQGRMQEAEL 559
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
VL +M G TY ++ +V D ++ +EM ++G PD
Sbjct: 560 VLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDD 608
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 176/410 (42%), Gaps = 47/410 (11%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
E A+ ++ +G P +NAI++ L + R+ + EM ++ + TY
Sbjct: 170 EEAFEIMNSMADKG-LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 228
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
LL EA +F G + DL +F +L+ R +H++ A +F K +F
Sbjct: 229 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMK-KF 287
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G D ++++G+C GN+ EA + ++++ C D + Y T +N L K+ L A
Sbjct: 288 GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDA 347
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+LF M E+G PD T +I C + +AL + M R P++ YN+LI
Sbjct: 348 DKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDG 407
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--------------------KK 411
CK+ ME E D M + PN IT+ L+ + K
Sbjct: 408 FCKVGEMEKASELWDGMISR--KIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIK 465
Query: 412 PEEVPW------------------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
P V L RM G +YN ++ +V D DK
Sbjct: 466 PTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLW 525
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+MEK+G+ PD +Y V+++G +GR+++A +M KG+ P+ T
Sbjct: 526 INKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRST 575
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 159/357 (44%), Gaps = 49/357 (13%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
N + +L+ Y A + E F + G L ++A +LL L + VE+A E
Sbjct: 47 NNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH 106
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E ++ ++ T+NI++N C G + K F ++ + D VTY T + A ++
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G L A + +M +KG KP + T N II+ LC K R A +L EM N G P+ TTY
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL----------------KSL 409
N+L+ C+ E EM ++ +P+ ++F+ L+ + +
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQ--GVVPDLVSFSSLIAVFSRNRHLDQALVYFRDM 284
Query: 410 KK----PEEVPWVL------------------ERMERNGCKMSTDTYNVILKLYVNWDCE 447
KK P+ V + + + M GC + YN IL N C+
Sbjct: 285 KKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL----NGLCK 340
Query: 448 DKV----RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+K+ ++EM ++G PD ++T +IHG G + ALS F M + + P+
Sbjct: 341 EKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPD 397
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 5/218 (2%)
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
C +++ + + + KL F+ + KG + CN ++ L +
Sbjct: 42 GNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVEL 101
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A EV RE+ G NV T N ++ LCK + + V +L EME NG + +T+N L
Sbjct: 102 AWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEME-GNG-IYADMVTYNTL 159
Query: 406 LKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ + + EE ++ M G K S TYN I+ + + EM G+
Sbjct: 160 IGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGL 219
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
PD +Y ++ + +A F EM +G+VP+
Sbjct: 220 SPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPD 257
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
+++ E E R ++++G L ++ NSL+ L KI +E +E E+ ++G L N
Sbjct: 62 RKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV-VRSGIEL-NVY 119
Query: 401 TFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T N ++ +L K ++V L ME NG TYN ++ Y ++ M
Sbjct: 120 TLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSM 179
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
KG+ P +Y +I+GL KGR A EM G+ P+ T
Sbjct: 180 ADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTT 225
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 79/214 (36%), Gaps = 39/214 (18%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++D + + +++D M N TYGIL+N Y + V EA +
Sbjct: 396 PDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRL 455
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF------------------------ 246
+D E G L ++ CR A+ F
Sbjct: 456 WDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVR 515
Query: 247 ------------ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ EK DI T N+++NG+C G + EA+ + +I+ PD T
Sbjct: 516 EDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRST 575
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
Y +N + L A R M ++G PD V
Sbjct: 576 YTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 176/373 (47%), Gaps = 15/373 (4%)
Query: 143 FKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYA 199
FK + G Y G F +++ +R F + QV D M ++ E + ++
Sbjct: 76 FKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACG 135
Query: 200 AAHMVEEAIGVFDR-RKEFGELDDLSAFQNLLLWLCRYKHVEVAETF----FESEKNEFG 254
AH+ EA+ F R + + +F ++L + + A F F + F
Sbjct: 136 KAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQ 195
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T N+I+ C LG + A ++++ C PD TY+T +N L K+ ++ A+ L
Sbjct: 196 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 255
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
M +G P+ VT N +IDAL + A +++ M +GC+PN TYN+LI LC
Sbjct: 256 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 315
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMST 431
+++ L++M + C+PN++T+ ++ L ++ E+ +L ME G K +
Sbjct: 316 KGKLDKALSLLEKM--VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANE 373
Query: 432 DTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
Y+ ++ L+ E+ VR W+EM +KG P+ Y I GL + ++A
Sbjct: 374 YIYSSLISGLFKEGKSENAVR-LWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 432
Query: 491 EMRLKGMVPEPRT 503
EM KG +P T
Sbjct: 433 EMLSKGFLPNAFT 445
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 157/361 (43%), Gaps = 29/361 (8%)
Query: 154 PGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++ L G+ + + L++ + N+ TYG ++N E+ + +
Sbjct: 301 PNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHI 360
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWC 268
+E G+ + + +L+ L + E A ++ E E G ++ ++G C
Sbjct: 361 LMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWK-EMAEKGCKPNVVVYGAFIDGLC 419
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
EA+ ++++ P++ TY++ + KKG A+ +++ M + + +VV
Sbjct: 420 RDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVV 479
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
C+ +++ LC R+ EAL V M G P+V Y+S+IK LC + ++ + EM
Sbjct: 480 CCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 539
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWD 445
+ + P+ +T+N L +L + + + +L M GC + T N+ L
Sbjct: 540 QCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFL------- 592
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTV---MIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
E ++ + P Q ++ L + R AL EM L+ + PEP
Sbjct: 593 ----------ETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPS 642
Query: 503 T 503
T
Sbjct: 643 T 643
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KK 411
++G PN+ TYN +IK LCK+ +++ + EM KN C P+ T++ L+ L ++
Sbjct: 191 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKN--CNPDVFTYSTLMNGLCKERR 248
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVIL-KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+E ++L+ M+ GC + T+NV++ L N D + + M KG P++ +Y
Sbjct: 249 VDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS-RAAKLVDNMFLKGCVPNEVTYN 307
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVI 525
+IHGL KG+L+ ALS +M VP T G ++N + +K + R E G ++
Sbjct: 308 TLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGL-VK-QRRAEDGVHIL 361
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 29/275 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
E A +K ++ +G P V+ A +D L R + E + EM L N TY
Sbjct: 390 ENAVRLWKEMAEKG-CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 448
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE- 252
L+ + ++AI V+ ++ LL LC + A T + E
Sbjct: 449 LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEG 508
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDII--KSKCEPDSVTYATFVNALTKKGKLGT 310
D+ + ++ G C +G+V + + + ++ + K PD VTY NAL ++ L
Sbjct: 509 LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTR 568
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE---------------------ALEV 349
A+ L +M ++G PD +TCN ++ L + P+ AL +
Sbjct: 569 AIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRI 628
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRM-ETVYE 383
+ EM R P +T++ +I+ CK KR+ ET+ E
Sbjct: 629 VEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETIDE 663
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 181/389 (46%), Gaps = 27/389 (6%)
Query: 146 VSREGDYSPGSNVFNAILDVLGRARR----------------FVELIQVFDEMPD---LV 186
VSR+G S S+VF ++L+ G + F + IQ F + +
Sbjct: 130 VSRKGKNS-ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQI 188
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
+ G L +R ++ A ++ + G D+ F L+ LC+ + A+ F
Sbjct: 189 PFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLF 248
Query: 247 -ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E K + + N ++NG+C GN+ + R + +++++ PD TY+ +N L K+
Sbjct: 249 GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKE 308
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G+L A +LF M ++G P+ VT +I+ C R +E+ ++M +G P+V TY
Sbjct: 309 GQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITY 368
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RM 422
N+LI LCK+ + + + EM Q+ P++ T+ L+ K ++ LE M
Sbjct: 369 NTLINGLCKVGDLREAKKLVIEMTQRGLK--PDKFTYTMLIDGCCKEGDLESALEIRKEM 426
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+ G ++ + ++ + + T EM + G+ PD +YT++IHG KG +
Sbjct: 427 VKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDV 486
Query: 483 EDALSYFHEMRLKGMVPEPRT-GILVNDM 510
+ EM+ G VP T +L+N +
Sbjct: 487 KTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 125/258 (48%), Gaps = 6/258 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P ++ +++ L + + + ++F EM D + N+ T+ L+N + + + +
Sbjct: 293 PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEI 352
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCV 269
+ + G D+ + L+ LC+ + E + E + D T ++++G C
Sbjct: 353 YQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCK 412
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G++ A K+++K E D+V + ++ ++G++ A R + M E G KPD T
Sbjct: 413 EGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDAT 472
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+I C K + ++L+EM+ G +P V TYN L+ LCK +M+ LD M
Sbjct: 473 YTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAM- 531
Query: 390 QKNGSCLPNEITFNYLLK 407
N +P++IT+N LL+
Sbjct: 532 -LNLGVVPDDITYNILLE 548
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 134/313 (42%), Gaps = 38/313 (12%)
Query: 223 LSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNVYEAKRFW 280
LS Q+LL ++ K A + F S G + ++++N + G +A + +
Sbjct: 119 LSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCF 178
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+ + K + + + L K A ++ + + G PDV N ++ LC +
Sbjct: 179 RLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKE 238
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK---------IKR--MET-----VYEY 384
+I EA + E+ RG P V ++N+LI CK +KR ME V+ Y
Sbjct: 239 HKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTY 298
Query: 385 ------------LDE-----MEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMER 424
LD+ +E + +PN++TF L+ + + + ++M R
Sbjct: 299 SVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLR 358
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G K TYN ++ + + EM ++G+ PD+ +YT++I G +G LE
Sbjct: 359 KGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLES 418
Query: 485 ALSYFHEMRLKGM 497
AL EM +G+
Sbjct: 419 ALEIRKEMVKEGI 431
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 181/372 (48%), Gaps = 19/372 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
+P +N ++ L R E + V +M N TY L+ + A ++ A
Sbjct: 7 APNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAER 66
Query: 210 VFDRRKEFGEL-DDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGW 267
V +E G +L F +++ LC+ +E A F+ E D+ + N +L+G+
Sbjct: 67 VVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 126
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C +G ++E+ + ++ + PD VT+ + ++A K G L A+ L M E+G + +
Sbjct: 127 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 186
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT +ID C K + +AL + EM+ G P+V YN+LI CK+ RM+ E + E
Sbjct: 187 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 246
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNW 444
ME K P+ +T++ ++ K + ++M + G TY+ +++
Sbjct: 247 MEAKRVK--PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR----G 300
Query: 445 DCEDK----VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
CE+K +E M + G+ PD+ +YT +I G +G +E ALS EM KG++P+
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360
Query: 501 PRT-GILVNDMN 511
T +L+N ++
Sbjct: 361 VVTYSVLINGLS 372
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 185/431 (42%), Gaps = 65/431 (15%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
+ + A + EG+ P FN++++ L +A R +VFDEM PD+V
Sbjct: 60 ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVV-- 117
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA------ 242
+Y LL+ Y + E++ VF + G + D+ F +L+ C+ ++E A
Sbjct: 118 -SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 176
Query: 243 ---------ETFFESEKNEF---GY------------------DIKTMNIILNGWCVLGN 272
E F + + F G+ + N ++NG+C LG
Sbjct: 177 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 236
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+ A+ +++ + +PD VTY+T ++ K G L +A +L Q M +KG PD +T +
Sbjct: 237 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 296
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+I LC +KR+ +A E+ M G P+ TY +LI CK +E DEM +K
Sbjct: 297 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK- 355
Query: 393 GSCLPNEITFNYLLKSLKKP----------------EEVPWVLERMERNGCKMSTDTYNV 436
LP+ +T++ L+ L K + VP ++ C + +V
Sbjct: 356 -GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSV 414
Query: 437 I--LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+ LK + + ++ M + D Y+++IHG G + ALS+ +M
Sbjct: 415 VALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR 474
Query: 495 KGMVPEPRTGI 505
G P + I
Sbjct: 475 SGFSPNSTSTI 485
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 4/183 (2%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M G P+V T N ++ ALC + R+ EA+ V+ +M+ GC PN TYN+L+ C+
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTY 434
++ + M ++ G+ PN +TFN ++ L K E V + M R G +Y
Sbjct: 61 LDGAERVVSLMREE-GNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 119
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N +L Y C + + EM ++G+ PD ++T +IH G LE A++ +MR
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179
Query: 495 KGM 497
+G+
Sbjct: 180 RGL 182
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 6/222 (2%)
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+++ P+ TY V AL +G+L A+ + M G P+ VT N ++ A C
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 343 IPEALEVLREMKNRG-CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ A V+ M+ G PN+ T+NS++ LCK RME + DEM ++ + P+ ++
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLA--PDVVS 118
Query: 402 FNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
+N LL K E V M + G T+ ++ ++ +M
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++G+ ++ ++T +I G KG L+DAL EMR G+ P
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 220
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 185/410 (45%), Gaps = 36/410 (8%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
+V + R+ F W+ R+ Y +N LD L +A + F +M
Sbjct: 7 VVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQR 66
Query: 183 ----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
PD + TY I+L A +++A + + +E G ++ + ++ C+
Sbjct: 67 RGYPPD---DFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASR 123
Query: 239 VEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
V+ A F++ + G D+ T N +L G C + EA ++ + K+ CEP+ ++Y+
Sbjct: 124 VDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYS 183
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
T ++ L K G+L A RL++ M EK PD+V + LC R+ EA + R+M +
Sbjct: 184 TLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK 243
Query: 357 GCLPNVTTY-----------------NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
G + + N +I+HLC+ ++ + +EM +N P+
Sbjct: 244 GSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHP--PSA 301
Query: 400 ITFNYLLKSLKKPEEVP---WVLERMERNG---CKMSTDTYNVILKLYVNWDCEDKVRHT 453
FN L+ ++ K + +P + +RM+ C + +TYN+++ D+ +
Sbjct: 302 ELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQEL 361
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
EM G+ PD +Y+ ++ GL G+L+ A EM +G+ P+ T
Sbjct: 362 VNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFT 411
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 176/388 (45%), Gaps = 27/388 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRA---RRFVELIQVFDEMPDLVNEKTYGILL 195
AY F+ + R G Y P ++ +L L +A + EL+ E +N TY +++
Sbjct: 57 AYEKFQQMQRRG-YPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVI 115
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGE-LDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEF 253
+ A V++A+ +F G + D+ F +LL LC + + A FE K
Sbjct: 116 DGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGC 175
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
++ + + +L+G C G + EA R W+++++ C PD V Y +FV L K ++ A
Sbjct: 176 EPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACD 235
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKR-----------------IPEALEVLREMKNR 356
+ M KG K D V + +I LC K + EA + EM +R
Sbjct: 236 CCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISR 295
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ-KNGSCLPNEITFNYLLKSL---KKP 412
P+ +N+LI +CK KR+ M+ K C PN T+N ++ +L K+
Sbjct: 296 NHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQL 355
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+E ++ M G TY+ ++ D+ EEM K+G+ PD + +
Sbjct: 356 DEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASI 415
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++ L G+++ ALS+ M+ +G P+
Sbjct: 416 LNALSKAGKVDYALSHLETMKARGSTPD 443
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 176/374 (47%), Gaps = 35/374 (9%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+ F+++++ G P ++ +LD L +A R E ++++EM PDLV Y
Sbjct: 163 AFVLFEYMAKAG-CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLV---AYT 218
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
+ A+ V EA + G D AF ++ LC+ H E A+
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ--------- 269
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
N ++ C G + EA + ++++I P + + T ++A+ K +L +
Sbjct: 270 --------NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321
Query: 313 RLFQ---AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
LFQ +M E P++ T N ++D LC K++ EA E++ EM N G P+V TY++L+
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALV 381
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKM 429
LCK+ +++ + L+EM ++ P+ T +L +L K +V + L +E +
Sbjct: 382 DGLCKLGKLDRACDLLEEMSKEG--VFPDSFTDASILNALSKAGKVDYALSHLETMKARG 439
Query: 430 STD---TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
ST TYN +L D+ +M PD SYT++I L G+ A
Sbjct: 440 STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAH 499
Query: 487 SYFHEMRLKGMVPE 500
+ F EM +G++P+
Sbjct: 500 AIFQEMVKRGVLPD 513
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 167/381 (43%), Gaps = 43/381 (11%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
KG E+A NQ ++ + R EA TF + +SR ++ P + +FN ++
Sbjct: 262 KGHAEEAQNQ---------MIEHLCRSGMLDEACKTFEEMISR--NHPPSAELFNTLIHA 310
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+ +++R + + +F M + KEF +L
Sbjct: 311 VCKSKRLPDGVLLFQRMKSM-----------------------------KEFYCPPNLET 341
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ ++ LC+ K ++ A+ N D+ T + +++G C LG + A +++
Sbjct: 342 YNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS 401
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K PDS T A+ +NAL+K GK+ AL + M +G PD+VT N ++D LC RI
Sbjct: 402 KEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRID 461
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA+ L +M C P+V +Y +I LC+ + + EM ++ LP+ + ++
Sbjct: 462 EAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG--VLPDTVLYHS 519
Query: 405 LLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
LL L + LE ++ + CK + ++L + E M G
Sbjct: 520 LLDGLARNGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPA 579
Query: 465 DQRSYTVMIHGLYDKGRLEDA 485
D +Y ++ GL G+++ A
Sbjct: 580 DAFTYISVVSGLRKLGKVDKA 600
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 167/358 (46%), Gaps = 21/358 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMP------DLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
FN + +L R +++ ++ + +M DL T I++N + + A
Sbjct: 93 FNRLFGLLARTKQYDLVLALCKQMELKGIAYDLY---TLNIMINCFCRRRKLGFAFSAMG 149
Query: 213 RRKEFGELDDLSAFQNLLLWLCR----YKHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
+ + G + F LL LC ++ VE+ + S+ D+ T+N I+NG C
Sbjct: 150 KIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVP---DLITLNTIVNGLC 206
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+ V EA ++ + C+P+ TY +N + K G +AL L + M + KP VV
Sbjct: 207 LKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVV 266
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T IID LC R+ +AL EM+ +G NV TYNSLI C R + + L +M
Sbjct: 267 TYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDM 326
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ + PN +TF+ L+ SL K E + M G + +T TYN ++ N
Sbjct: 327 ITRKIT--PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDK 384
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ + M KG PD +Y ++I+G +++D + F +M L+GM+ + T
Sbjct: 385 RLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVT 442
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 197/463 (42%), Gaps = 87/463 (18%)
Query: 121 TDDLIVNVINRYR---FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
T ++++N R R F + A FK Y P + FN +L+ L R E ++
Sbjct: 127 TLNIMINCFCRRRKLGFAFSAMGKIFKL-----GYEPNTVTFNTLLNGLCLEGRVFEAVE 181
Query: 178 VFDEM------PDLV--------------------------------NEKTYGILLNRYA 199
+ D M PDL+ N+ TYG +LNR
Sbjct: 182 LVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMC 241
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIK 258
+ A+ + + + + + ++ LC+ ++ A +FF E E ++
Sbjct: 242 KSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVF 301
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N ++ +C G + + +D+I K P+ VT++ +++L K+GKL A L+ M
Sbjct: 302 TYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEM 361
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
+G +P+ +T N +I LC KR+ EA +++ M ++GC P++ TYN LI CK K++
Sbjct: 362 ITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQV 421
Query: 379 ETVYEYLDEMEQKN-------------GSCL--------------------PNEITFNYL 405
+ +M + G C P +T+ L
Sbjct: 422 DDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAIL 481
Query: 406 LKSL---KKPEEVPWVLERMERNGCKMSTD--TYNVILKLYVNWDCEDKVRHTWEEMEKK 460
L L + EE +L++M + CKM D YN+I+ N + D + + K
Sbjct: 482 LDGLCDNGELEEALGILDQMHK--CKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSK 539
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G+ D +SY +M+ GL + L +A + F +M+ G P+ T
Sbjct: 540 GVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCT 582
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 5/226 (2%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A ++ +++S+ P + + L + + L L + M KG D+ T N +I
Sbjct: 73 DAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMI 132
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C ++++ A + ++ G PN T+N+L+ LC R+ E +D M
Sbjct: 133 NCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH- 191
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
+P+ IT N ++ L + E ++ RM NGC+ + TY IL
Sbjct: 192 -VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASAL 250
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ME + + P +YT++I L GRL+DALS+F EM KG+
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGI 296
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 10/244 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +N+++ L +R E Q+ D M PD+ TY IL+N + A V++
Sbjct: 368 PNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIW---TYNILINGFCKAKQVDDG 424
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNG 266
+ +F + G + D + L+ C+ + + VA+ F+ ++ + I T I+L+G
Sbjct: 425 MRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDG 484
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G + EA + K K E D Y ++ + K+ A LF ++ KG K D
Sbjct: 485 LCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRD 544
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+ + N ++ LC + + EA + R+MK G P+ TYN+LI+ + + T + ++
Sbjct: 545 IQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIE 604
Query: 387 EMEQ 390
EM++
Sbjct: 605 EMKR 608
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 91/186 (48%), Gaps = 10/186 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
++ ++ ++R+ + +VF EM P ++ TY ILL+ +EEA+G+ D
Sbjct: 443 YSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIM---TYAILLDGLCDNGELEEALGILD 499
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLG 271
+ + D+ + ++ +C V+ A + F S ++ DI++ NI+L+G C
Sbjct: 500 QMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRS 559
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
++ EA ++ + + EPD TY T + A + + T+++L + M G D T
Sbjct: 560 SLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVK 619
Query: 332 CIIDAL 337
++D L
Sbjct: 620 IVMDML 625
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 166/357 (46%), Gaps = 20/357 (5%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E +P ++ + A++ RA RF + + VF M P LV TY ++ + Y+
Sbjct: 177 EAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALV---TYNVVFHAYSKMS 233
Query: 203 MV-EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK--HVEVAETFFESEKNEFGYDIKT 259
+ +E + + D KE G D + N L+ CR + H E A+ F E + F D T
Sbjct: 234 VPWKEVVALVDSMKEDGIERDRYTY-NTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVT 292
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N +L+ + EA K + + C P VTY + ++A K G L AL L Q M
Sbjct: 293 FNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEME 352
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK-HLCKIKRM 378
+G KPDVVT +I L +I AL EM GC PN+ TYN+LIK H + K
Sbjct: 353 FRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFT 412
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYN 435
E + + D ++ +P+ +T+N LL + EV V + M++ G DTY
Sbjct: 413 EMMAVFDD---LRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYV 469
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
++ Y D+ ++ M + G+ PD +Y ++ L GR E A F EM
Sbjct: 470 SLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEM 526
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 197/462 (42%), Gaps = 91/462 (19%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
T + +++ R EAA F + + + P FN++LDV G+AR+ E I V
Sbjct: 257 TYNTLISCCRRRGLHREAAQVFDEM--KAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLK 314
Query: 181 EM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
M P +V TY L++ Y ++EEA+ + + G D+ + L+ L
Sbjct: 315 RMENAGCTPSVV---TYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLD 371
Query: 235 RYKHVEVA-ETFFESEKN---------------------------------EFGY--DIK 258
R ++ A T+ E +N GY D+
Sbjct: 372 RVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVV 431
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N +L+ + G E +K++ K+ P+ TY + +++ ++ G A+ +++ M
Sbjct: 432 TWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRM 491
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC---KI 375
E G PD+ T N ++ AL R +A ++ EM +R C P+ +Y+SL+ K+
Sbjct: 492 IEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKL 551
Query: 376 KRMETVYE--YLDEMEQKN------------GSCLP-NEITFNYLL-------------- 406
+M+T+ E Y + +E+ N + LP E F L
Sbjct: 552 DKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAM 611
Query: 407 -------KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW-DCEDKVRHTWEEME 458
K +KK EEV L M N S TYN ++ +Y DCE K E++
Sbjct: 612 VSIYGKNKMVKKVEEV---LSLMMENSINHSAATYNSLMHMYSRLGDCE-KCESILTEIK 667
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
GM PD+ SY +I+ KG++++A F EM+ G+ P+
Sbjct: 668 SSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPD 709
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 138/288 (47%), Gaps = 20/288 (6%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG----YDIKTMNIILNGWCVLGNVYEAK 277
DL A N L R H +A + ++ G + + + + + G + EA
Sbjct: 116 DLPAVVNTLA--SRGGHPGIAVAVVRAARDLHGDRALHHPRVLPTAIRVFARAGCLAEAS 173
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
I+++ PD+ Y V+A ++ G+ A+ +FQ M + G +P +VT N + A
Sbjct: 174 A----ILEAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAY 229
Query: 338 CFKKRIP--EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME-TVYEYLDEMEQKNGS 394
K +P E + ++ MK G + TYN+LI C+ + + + DEM K
Sbjct: 230 S-KMSVPWKEVVALVDSMKEDGIERDRYTYNTLIS-CCRRRGLHREAAQVFDEM--KAAG 285
Query: 395 CLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
P+++TFN LL +K EE VL+RME GC S TYN ++ YV ++
Sbjct: 286 FEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEAL 345
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+EME +GM PD +YT +I GL G+++ AL+ + EM G P
Sbjct: 346 ELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSP 393
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 167/381 (43%), Gaps = 24/381 (6%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+AA + + R G SP +NA++ + G +F E++ VFD++ PD+V T
Sbjct: 377 DAALATYSEMVRNG-CSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVV---T 432
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
+ LL+ + + E GVF K+ G + + + +L+ R + A ++
Sbjct: 433 WNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMI 492
Query: 251 NEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
Y DI T N +L+ G +A++ + +++ C+PD ++Y++ ++A KL
Sbjct: 493 EAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLD 552
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR----IPEALEVLREMKNRGCLPNVTTY 365
L + ++ + + N ++ L +PE + +E++ R C ++
Sbjct: 553 KMKTLSEDIYAE----RIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVL 608
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL---KSLKKPEEVPWVLERM 422
N+++ K K ++ V E L M + S + T+N L+ L E+ +L +
Sbjct: 609 NAMVSIYGKNKMVKKVEEVLSLMMEN--SINHSAATYNSLMHMYSRLGDCEKCESILTEI 666
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+ +G + +YN ++ Y + + EM+ G+ PD +Y + I
Sbjct: 667 KSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMF 726
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
E+A+ + +G P RT
Sbjct: 727 EEAIDLVRYLVTQGCRPNERT 747
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 136/311 (43%), Gaps = 46/311 (14%)
Query: 123 DLIVNVINRYR----FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
D V++I+ Y FD A +K + G Y P + +NA+L L R R+ + ++
Sbjct: 466 DTYVSLISSYSRCGLFDQ--AMEIYKRMIEAGIY-PDISTYNAVLSALARGGRWEQAEKL 522
Query: 179 FDEMPDL---VNEKTYGILLNRYAAAHMVEE----AIGVFDRR----------------- 214
F EM D +E +Y LL+ YA A +++ + ++ R
Sbjct: 523 FAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNK 582
Query: 215 --------KEFGELD------DLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKT 259
K F EL D++ ++ + K V+ V E +N + T
Sbjct: 583 VNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAAT 642
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N +++ + LG+ + + +I S PD +Y T + A +KG++ A RLF M
Sbjct: 643 YNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 702
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
G KPD+VT N I + EA++++R + +GC PN T+NS+++ + RM
Sbjct: 703 CSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMV 762
Query: 380 TVYEYLDEMEQ 390
+L + +
Sbjct: 763 EAKSFLSNLPK 773
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 168/390 (43%), Gaps = 45/390 (11%)
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
++ N +D L ++ + F E+ D LVN +Y IL+N + ++EAI +F
Sbjct: 67 HLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGE 126
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVL-- 270
K G S + L+ LCR + + A+ F+E + G T NI+++G+C
Sbjct: 127 MKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADR 186
Query: 271 ---------------------------------GNVYEAKRFWKDIIKSKCEPDSVTYAT 297
G ++EA+ F+ + K P VT+
Sbjct: 187 VPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTV 246
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
++ L K ++ A +F + E G P VV C+C++D C + EA + M NRG
Sbjct: 247 LIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRG 306
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP- 416
C PN + N LI LCK KR+ E +E+ ++ P+ +T++ + L + V
Sbjct: 307 CTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAK--PDVVTYSTFMDGLCRAHRVDQ 364
Query: 417 --WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE-EMEKKGMGPDQRSYTVMI 473
VL + G Y ++ + D+ R +E +M G P+ + V++
Sbjct: 365 ARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLV 424
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+G GRL++A F +G+ P+ RT
Sbjct: 425 NGFGLAGRLDEARELFQRFVERGVQPDCRT 454
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C +G + EA + ++ C + V L+K G+ L++ + M ++ + +
Sbjct: 10 CHVGKLDEALELFHSLVSDGC---GLPADLLVRELSKAGRAEECLKVVKLMLDRQQLRER 66
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
N ID+LC I +A +E+K+ L N +YN LI CK KR++ + E
Sbjct: 67 HLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGE 126
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
M K C P+ T+N L+ L + E E ER+ +G S TYN+++ +
Sbjct: 127 M--KAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKA 184
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTG 504
D + E+ +G Y +I L+ KG++ +A +F+ M G+ P+ T
Sbjct: 185 DRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTF 244
Query: 505 ILVND 509
++ D
Sbjct: 245 TVLID 249
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 115/255 (45%), Gaps = 6/255 (2%)
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
+NI ++ C + +A+ +++++ + ++V+Y +NA K ++ A++LF M
Sbjct: 69 VNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMK 128
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
G P T N +I LC +R+ EA + + + G + TYN L+ CK R+
Sbjct: 129 APGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVP 188
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNV 436
E L+E+ + G + +N ++ +L K E RME++G + T+ V
Sbjct: 189 EAVELLNELVARGG--VVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTV 246
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ + + + + + G P + ++ G G +++A F M +G
Sbjct: 247 LIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRG 306
Query: 497 MVP-EPRTGILVNDM 510
P + IL+N +
Sbjct: 307 CTPNDVSCNILINGL 321
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 44/279 (15%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-PDLV--NEKTYGI 193
EA + V+R G + S +N I+D L + + E F+ M D V E T+ +
Sbjct: 189 EAVELLNELVARGGVVT--SAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTV 246
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L++ A+ V A +F E G + L+ C+Y V+ A FE N
Sbjct: 247 LIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRG 306
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
D+ + NI++NG C + +A+ +++++K + +PD VTY+TF++ L + ++ A
Sbjct: 307 CTPNDV-SCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQA 365
Query: 312 LRLFQAMWEKGRKPDVV------------------------------------TCNCIID 335
++ + +KG PDVV TCN +++
Sbjct: 366 RQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVN 425
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
R+ EA E+ + RG P+ T++++ + K
Sbjct: 426 GFGLAGRLDEARELFQRFVERGVQPDCRTFSAMANNTAK 464
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 79/201 (39%), Gaps = 37/201 (18%)
Query: 333 IIDALCFKKRIPEALEVLREMKNRGC-LPNVTTYNSL----------------------- 368
I+ LC ++ EALE+ + + GC LP L
Sbjct: 5 IVLCLCHVGKLDEALELFHSLVSDGCGLPADLLVRELSKAGRAEECLKVVKLMLDRQQLR 64
Query: 369 --------IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPW 417
I LCK ++ + E++ G L N +++N L+ + K+ +E
Sbjct: 65 ERHLVNITIDSLCKSDMIDKAESWFQELKDFRG--LVNTVSYNILINAFCKTKRIDEAIQ 122
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ M+ GC ST TYN ++ + + + +E + G G +Y +++ G
Sbjct: 123 LFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFC 182
Query: 478 DKGRLEDALSYFHEMRLKGMV 498
R+ +A+ +E+ +G V
Sbjct: 183 KADRVPEAVELLNELVARGGV 203
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 185/411 (45%), Gaps = 34/411 (8%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
KG++ KAL+ D L+ I +FD + T V + GD
Sbjct: 142 KGQVNKALH-----FHDKLLAQGI---KFDQVSYGTLINGVCKIGD-------------- 179
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
R ++L++ D N + Y +++ +V EA G+F G D+
Sbjct: 180 ---TRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236
Query: 226 FQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ C ++ A E ++ T NI+++ C G V EAK ++
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVML 296
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K+ +PD +TY+T ++ +L A +F AM G PDV + +I+ C K +
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVD 356
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP-NEITFN 403
EAL + +EM + +P + TY+SLI LCK R+ V++ +DEM + +P N IT+N
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG---IPANVITYN 413
Query: 404 YLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
L+ L K + + +M+ G + + T+ ++L + ++++ K
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTK 473
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
G D Y VMI+G +G LE+AL+ +M G VP T I++N +
Sbjct: 474 GYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINAL 524
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 144/333 (43%), Gaps = 37/333 (11%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
V++A+ F+R + F +L + KH A + E D+ T+NI
Sbjct: 40 VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++N +C +G + I+K +P ++T+ T + L KG++ AL + +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
K D V+ +I+ +C A++++R++ R PNV YN++I LCK + + Y
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219
Query: 383 EYLDEMEQKN-------------GSCL--------------------PNEITFNYLLKSL 409
EM K G C+ PN T+N L+ +L
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
Query: 410 ---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K +E VL M + K TY+ ++ Y K +H + M G+ PD
Sbjct: 280 CKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDV 339
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
SYT++I+G +++AL+ F EM K MVP
Sbjct: 340 HSYTILINGFCKNKMVDEALNLFKEMHQKNMVP 372
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 4/210 (1%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L +A+ + + PD+ +Y IL+N + MV+EA+ +F + + +
Sbjct: 320 LKKAQHVFNAMSLMGVTPDV---HSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376
Query: 226 FQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ +L+ LC+ + V + E ++ T N +++G C G++ A + +
Sbjct: 377 YSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMK 436
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
P S T+ ++ L K G+L A FQ + KG DV N +I+ C + +
Sbjct: 437 DQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLE 496
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
EAL +L +M+ GC+PN T++ +I L K
Sbjct: 497 EALTMLSKMEENGCVPNAVTFDIIINALFK 526
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 115/243 (47%), Gaps = 6/243 (2%)
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
NV +A + ++ + P + + +++ K TA+ L + KG +PD++T N
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I+ C +I VL ++ RG P+ T+ +LIK LC ++ + D++ +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ 158
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCED 448
+++++ L+ + K + ++ +++ K + + YN I+ +
Sbjct: 159 GIKF--DQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVS 216
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILV 507
+ + EM KG+ D +YT +I+G +L++A+ +EM LK + P T ILV
Sbjct: 217 EAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Query: 508 NDM 510
+ +
Sbjct: 277 DAL 279
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 108/233 (46%), Gaps = 11/233 (4%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVN 187
++ + A F +S G +P + + +++ + + E + +F EM P +V
Sbjct: 318 YELKKAQHVFNAMSLMG-VTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV- 375
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
TY L++ + + + D ++ G ++ + +L+ LC+ H++ A F
Sbjct: 376 --TYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFN 433
Query: 248 SEKNEFGYDIK-TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
K++ T I+L+G C G + +A+ ++D++ D Y +N K+G
Sbjct: 434 KMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQG 493
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
L AL + M E G P+ VT + II+AL K +A ++LR+M RG L
Sbjct: 494 LLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 158/335 (47%), Gaps = 9/335 (2%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L A + +E + P++V Y IL+ YA+ +EEA + D G D+
Sbjct: 454 LSLANKLLEKMTFSGLKPNVV---VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFC 510
Query: 226 FQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ ++ L + +E A T+ E + D T + G+ G + EA +++ +++
Sbjct: 511 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 570
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
P++ Y +N K G L AL +F+ + G PDV TC+ I L R+
Sbjct: 571 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQ 630
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EAL+V E+K +G +P+V TY+SLI CK +E +E DEM K + PN +N
Sbjct: 631 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA--PNIFIYNA 688
Query: 405 LLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ L K ++ + + M G + + TY+ ++ Y + + + EM KG
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ P Y ++HG +G +E A++ F EM KG
Sbjct: 749 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 783
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 187/437 (42%), Gaps = 42/437 (9%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
E A T+ + G P + F A + + + E + FDEM D + N Y +
Sbjct: 525 EEASTYLLEIQGRG-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 583
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L+N + A + EA+ +F R G L D+ + L + V+ A F SE E
Sbjct: 584 LINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF-SELKEK 642
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G D+ T + +++G+C G V +A ++ P+ Y V+ L K G + A
Sbjct: 643 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 702
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+LF M EKG +PD VT + +ID C + + EA + EM ++G P+ YN+L+
Sbjct: 703 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 762
Query: 372 LCKIKRMETVYEYLDEMEQK------------NGSC--------------------LPNE 399
CK ME EM QK +G C +P+
Sbjct: 763 CCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDH 822
Query: 400 ITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
+T+ ++ K EE + + M+ + T TY ++ Y +V +E+
Sbjct: 823 VTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEK 882
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKE 516
M KG+ PD+ +Y ++I+ + L +A E+ KGM+ + L+ K ++
Sbjct: 883 MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRED 942
Query: 517 RGEQGKKVIKLTSLGLK 533
E K + ++ LGLK
Sbjct: 943 LTEASKLLDEMGELGLK 959
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 158/358 (44%), Gaps = 11/358 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTY---GILLNRYAAAHMVEEAIGV 210
P + + I L RA+R E F+EM + Y L++ + ++E + +
Sbjct: 296 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 355
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWC 268
D G +L + L+ LC++ +E A + G + +T +++ G+C
Sbjct: 356 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT-LGCKPNSRTFCLLIEGYC 414
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
N+ A ++ K P +V+Y +N L L A +L + M G KP+VV
Sbjct: 415 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 474
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+ +I A + RI EA +L M G P++ YN++I L K +ME YL E+
Sbjct: 475 VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 534
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ + P+ +TF + K E + M +G + Y V++ +
Sbjct: 535 QGRGLK--PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 592
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + + G+ PD ++ + IHGL GR+++AL F E++ KG+VP+ T
Sbjct: 593 NLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 650
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 148/342 (43%), Gaps = 6/342 (1%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+G VEL + E + N TY I+ A + EA F+ ++ G D +A
Sbjct: 276 VGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNA 335
Query: 226 FQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
L+ R + EV ++ T N++++G C G + +A K ++
Sbjct: 336 CSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMV 395
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
C+P+S T+ + ++ +G AL L M ++ P V+ +I+ LC K +
Sbjct: 396 TLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLS 455
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
A ++L +M G PNV Y+ LI R+E LD M + P+ +N
Sbjct: 456 LANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVA--PDIFCYNA 513
Query: 405 LLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
++ L K EE L ++ G K T+ + Y + ++EM G
Sbjct: 514 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 573
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ P+ YTV+I+G + G L +ALS F + G++P+ +T
Sbjct: 574 LMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQT 615
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 136/304 (44%), Gaps = 13/304 (4%)
Query: 240 EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK---DIIKSKCEPDSVTYA 296
E A FF ++ + + N +L G + + FWK ++ +K D TY
Sbjct: 176 EAANVFFVAKNDSILISLIRCNSLLKDLLKCGMM---ELFWKVYNGMLDAKMGFDVYTYT 232
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
V AL K G L A R+ M EKG P+ + +I+ +C I EA+E+ R M +
Sbjct: 233 YLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEK 292
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP 416
G +PN TY + LC+ KRM +EM QK G P+ + L+ + ++
Sbjct: 293 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM-QKTG-LKPDYNACSALIDGFMREGDID 350
Query: 417 WVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
VL + M G ++ TYNV++ + +K + M G P+ R++ ++I
Sbjct: 351 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLI 410
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVIKLTSLGL 532
G + + AL EM + +VP + G ++N + K+ K + K+T GL
Sbjct: 411 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGL-CHCKDLSLANKLLEKMTFSGL 469
Query: 533 KGNA 536
K N
Sbjct: 470 KPNV 473
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 147/339 (43%), Gaps = 8/339 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIG 209
+P ++NA++D L ++ ++FD MP+ E TY +++ Y + V EA
Sbjct: 680 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 739
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCV 269
+F G + L+ C+ +E A F + + N +++G+C
Sbjct: 740 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCK 799
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ EA + ++++I + PD VTY T ++ K GK+ A LF+ M E+ D VT
Sbjct: 800 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 859
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
++ + E + +M +G P+ TY +I CK + ++ DE+
Sbjct: 860 YTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVV 919
Query: 390 QKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
K L + L+ +L K E E +L+ M G K S N +++ +
Sbjct: 920 GKG--MLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGK 977
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
D+ +E ++ G+ PD + +++G + EDA
Sbjct: 978 MDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDA 1016
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 12/242 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D E A F+ + ++G + S FN ++D ++ + E Q+F EM PD V
Sbjct: 768 DMEKAMNLFREMLQKGFATTLS--FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV-- 823
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFE 247
TY +++ + A +EEA +F +E + D + +L+ + + EV F +
Sbjct: 824 -TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEK 882
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
D T +++ C N+ EA + +++ + + AL K+
Sbjct: 883 MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRED 942
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L A +L M E G KP + CN ++ + ++ EA V +K+ G +P+ TT
Sbjct: 943 LTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLID 1002
Query: 368 LI 369
L+
Sbjct: 1003 LV 1004
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 9/183 (4%)
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P V + +ID+ + EA V KN L ++ NSL+K L K ME
Sbjct: 155 GSSP--VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELF 212
Query: 382 YEYLDEM-EQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVI 437
++ + M + K G + T+ YL+ +L K ++ VL M+ G + Y+++
Sbjct: 213 WKVYNGMLDAKMGF---DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLV 269
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
++ D+ M +KG+ P+ +YT++ GL R+ +A F EM+ G+
Sbjct: 270 IEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGL 329
Query: 498 VPE 500
P+
Sbjct: 330 KPD 332
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 171/343 (49%), Gaps = 15/343 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +++ L +A + VE ++F EM PD E TY L++ Y A ++EA
Sbjct: 390 PDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPD---EVTYTALIDGYCKAGEMKEA 446
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNG 266
+ ++ E G ++ + L+ LC+ V++A E E + ++ T N ++NG
Sbjct: 447 FSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALING 506
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +GN+ +A + +++ + PD++TY T ++A K G++ A L + M +KG +P
Sbjct: 507 LCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPT 566
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+VT N +++ C + + +++ M ++G +PN TT+NSL+K C M E
Sbjct: 567 IVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYK 626
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEV--PWVLER-MERNGCKMSTDTYNVILKLYVN 443
M + +P+ T+N L+K K + W L + M G ++ +YN ++K +
Sbjct: 627 GMHAQ--GVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYK 684
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
++ R +EEM G ++ Y + + Y++G E+ L
Sbjct: 685 RKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTL 727
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 157/342 (45%), Gaps = 9/342 (2%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
LG+ + +E +Q P N+ TY +++ V EA V K D
Sbjct: 303 LGKVLKLMEELQRKGLKP---NQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVV 359
Query: 226 FQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ + +V V F E ++ + D T +++G C G V EA++ + +++
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEML 419
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+PD VTY ++ K G++ A L M EKG P+VVT ++D LC +
Sbjct: 420 SKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVD 479
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
A E+L EM +G PNV TYN+LI LCK+ +E + ++EM+ P+ IT+
Sbjct: 480 IANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDL--AGFFPDTITYTT 537
Query: 405 LLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
++ + K E+ +L M G + + T+NV++ + + + M KG
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ P+ ++ ++ + + + + M +G+VP+ T
Sbjct: 598 IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNT 639
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 195/476 (40%), Gaps = 40/476 (8%)
Query: 60 FLG----RIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGE----IEK 111
FLG R + + SL +S+ + F Y + ++ + + S + K +
Sbjct: 24 FLGFGPRRCLSVKFSTSLGSSNARP-FPDYSPRKPSVTDTDFVHHISTTIKQRRAEPFRR 82
Query: 112 ALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARR 171
L E D ++ V+ R D++ FF W D S S + V + R
Sbjct: 83 ILKPFESKFRPDHLIWVLMSIRDDYKLVLDFFDWARLRRDPSLESLCIVVQIAVASKDLR 142
Query: 172 FVE-LIQVFDEMPDL---------------------VNEKTYGILLNRYAAAHMVEEAIG 209
L+ F E P L + + + A ++ EA
Sbjct: 143 MAHRLVFEFWEKPHLDVGNSFDRFTERLIYTYKDWGAHPLVFDVFFQVLVEAGLLLEAGK 202
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAETFFESEKNEFG--YDIKTMNIILNG 266
+FD+ +G L + + L L + + A F E +E G ++ + NIIL+
Sbjct: 203 LFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFR-EYSEVGVCWNTVSYNIILHL 261
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C LG V EA + PD V+Y+ V+ + +LG L+L + + KG KP+
Sbjct: 262 LCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPN 321
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
T N II LC R+ EA +VLR MKN+ P+ Y +LI K + Y+ D
Sbjct: 322 QYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFD 381
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM++K +P+ +T+ ++ L K E + M G K TY ++ Y
Sbjct: 382 EMKRKK--IVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCK 439
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +M +KG+ P+ +YT ++ GL G ++ A HEM KG+ P
Sbjct: 440 AGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQP 495
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 34/246 (13%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
++V+Y ++ L + GK+ A L M +G PDVV+ + I+D C +++ + L+++
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
E++ +G PN TYNS+I LCK R+ + L M KN P+ + + L+
Sbjct: 311 EELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVM--KNQRIFPDNVVYTTLISGFG 368
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
K V +V KL+ +EM++K + PD +YT
Sbjct: 369 KSGNV-------------------SVEYKLF-------------DEMKRKKIVPDFVTYT 396
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSL 530
MIHGL G++ +A F EM KG+ P+ T + D K E E ++
Sbjct: 397 SMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEK 456
Query: 531 GLKGNA 536
GL N
Sbjct: 457 GLTPNV 462
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 171/354 (48%), Gaps = 9/354 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + + ++++ LGR R E +++++M D + N Y L+ + E+ +
Sbjct: 477 PDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKI 536
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCV 269
++ G DL + + + +E F+ KN F D ++ I+++G
Sbjct: 537 YNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVK 596
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G +EA + + + C D+ Y T ++ K GK+ A +L + M KG +P VVT
Sbjct: 597 AGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVT 656
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ID L R+ EA + E K++G NV Y+SLI K+ R++ Y ++E+
Sbjct: 657 YGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELM 716
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDC 446
QK + PN T+N LL +L K EE+ L + M+ C + TY++++
Sbjct: 717 QKGLT--PNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRK 774
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+K W+EM+K+G P+ +YT MI GL G + +A + F + + KG V +
Sbjct: 775 FNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 172/357 (48%), Gaps = 10/357 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P ++N +D G+A + + F EM ++++ TY ++ A + EA+ +
Sbjct: 268 PDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVEL 327
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCV 269
F+ + ++ A+ +++ E A + E ++ + + + N IL+
Sbjct: 328 FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G V EA + ++++ K P+ TY ++ L K GKL TAL + AM + G P+V+T
Sbjct: 388 KGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N ++D LC +R+ +A + + ++ C P+ TY SLI+ L + R++ Y+ ++M
Sbjct: 447 VNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML 506
Query: 390 QKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
N +PN + + L+++ K E+ + M R GC N +
Sbjct: 507 DANQ--IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+K R ++E++ G PD RSYT++IHGL G +A F+ M+ +G V + R
Sbjct: 565 IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 181/421 (42%), Gaps = 17/421 (4%)
Query: 95 QNILKTCSVSTKG----EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
Q I C + G +E L + +L +L++ V+ R + D A +F+W R
Sbjct: 66 QVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLK-DVNNAVNYFRWAERLT 124
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMP----DLVNEKTYGILLNRYAAAHMVEE 206
D + +N++L V+ R R+F L Q+ +EM N I+L+ + + + E
Sbjct: 125 DRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLS-FIKSRKLRE 183
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
A ++ SA+ NL+ L + + T F+ + E GY ++ ++
Sbjct: 184 AFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQ-QMQELGYAVNVHLFTTLI 242
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ G V A ++ + EPD V Y ++ K GK+ A + F M G
Sbjct: 243 RVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLV 302
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
D VT +I LC R+ EA+E+ M +P YN++I + E Y
Sbjct: 303 LDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSL 362
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME--RNGCKMSTDTYNVILKLYV 442
L+ Q+ C+P+ +++N +L L + +V L++ E + + TYN+++ +
Sbjct: 363 LE--RQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLC 420
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ + M+ G+ P+ + +M+ L RL+DA S F + K P+
Sbjct: 421 KAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAV 480
Query: 503 T 503
T
Sbjct: 481 T 481
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 40/362 (11%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
SP + N +D + +A + +F E+ +L + ++Y IL++ A EA
Sbjct: 546 SPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYE 605
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIILNGW 267
+F KE G + D A+ ++ C+ V A E K + G++ + T +++G
Sbjct: 606 LFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK-GHEPTVVTYGSVIDGL 664
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
+ + EA +++ E + V Y++ ++ K G++ A + + + +KG P+V
Sbjct: 665 AKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 724
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T NC++DAL + I EAL + MK+ C PN TY+ LI LCKI++ + + E
Sbjct: 725 YTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQE 784
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
M+++ PN T+ ++ L K + + DT
Sbjct: 785 MQKQGFK--PNVFTYTTMISGLAKAGNI-------------VEADTL------------- 816
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
+E+ ++KG D Y +I GL + R DA F E RLKG +T +++
Sbjct: 817 ------FEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVL 870
Query: 508 ND 509
D
Sbjct: 871 LD 872
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 179/396 (45%), Gaps = 21/396 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGI 193
+E AY+ + R+G P +N IL LGR + E ++ F+EM + N TY I
Sbjct: 356 FEDAYSLLERQRRKGCI-PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNI 414
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
+++ A +E A+ V D K+ G ++ ++ LC+ + ++ A + FE
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFE------ 468
Query: 254 GYDIKTMNIILNGWCVL-------GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
G D KT +C L G V EA + ++ ++ + P++V Y + + K G
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCG 528
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ +++ M G PD++ N +D + I + + +E+KN G +P+ +Y
Sbjct: 529 RKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYT 588
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERME 423
LI L K YE M+++ C+ + +N ++ K +V +LE M+
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTMKEQ--GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 646
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G + + TY ++ D D+ +EE + KG+ + Y+ +I G GR++
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRID 706
Query: 484 DALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
+A E+ KG+ P T + D +K +E E
Sbjct: 707 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 165/379 (43%), Gaps = 41/379 (10%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+ +++ VL +A R E +++F+ M + Y ++ Y A E+A + +R++
Sbjct: 308 YTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQR 367
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
G + + ++ +L L R V+ A FE K + ++ T NI+++ C G + E
Sbjct: 368 RKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKL-E 426
Query: 276 AKRFWKDIIK-SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+D +K + P+ +T V+ L K +L A +F+ + K +PD VT +I
Sbjct: 427 TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM------ 388
+ L R+ EA ++ +M + +PN Y SLI++ K R E ++ +EM
Sbjct: 487 EGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCS 546
Query: 389 ---------------------------EQKNGSCLPNEITFNYLLKSLKKP---EEVPWV 418
E KN +P+ ++ L+ L K E +
Sbjct: 547 PDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYEL 606
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
M+ GC + T YN ++ + +K EEM+ KG P +Y +I GL
Sbjct: 607 FYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAK 666
Query: 479 KGRLEDALSYFHEMRLKGM 497
RL++A F E + KG+
Sbjct: 667 IDRLDEAYMLFEEAKSKGI 685
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 160/351 (45%), Gaps = 11/351 (3%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEA 207
D P + +N ++D+L +A + + V D M D N T I+++R A +++A
Sbjct: 404 DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDA 463
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILN 265
+F+ D + +L+ L R+ V+ A +E + N+ + ++I N
Sbjct: 464 CSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRN 523
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+ G + + + ++++ C PD + T+++ + K G++ LFQ + G P
Sbjct: 524 -FFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP 582
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D + +I L EA E+ MK +GC+ + YN++I CK ++ Y+ L
Sbjct: 583 DARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 642
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+EM+ K P +T+ ++ L K +E + E + G +++ Y+ ++ +
Sbjct: 643 EEMKTKGHE--PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
D+ EE+ +KG+ P+ ++ ++ L + +AL F M+
Sbjct: 701 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMK 751
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 171/354 (48%), Gaps = 9/354 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + + ++++ LGR R E +++++M D + N Y L+ + E+ +
Sbjct: 477 PDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKI 536
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCV 269
++ G DL + + + +E F+ KN F D ++ I+++G
Sbjct: 537 YNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVK 596
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G +EA + + + C D+ Y T ++ K GK+ A +L + M KG +P VVT
Sbjct: 597 AGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVT 656
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ID L R+ EA + E K++G NV Y+SLI K+ R++ Y ++E+
Sbjct: 657 YGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELM 716
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDC 446
QK + PN T+N LL +L K EE+ L + M+ C + TY++++
Sbjct: 717 QKGLT--PNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRK 774
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+K W+EM+K+G P+ +YT MI GL G + +A + F + + KG V +
Sbjct: 775 FNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 172/357 (48%), Gaps = 10/357 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P ++N +D G+A + + F EM ++++ TY ++ A + EA+ +
Sbjct: 268 PDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVEL 327
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCV 269
F+ + ++ A+ +++ E A + E ++ + + + N IL+
Sbjct: 328 FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G V EA + ++++ K P+ TY ++ L K GKL TAL + AM + G P+V+T
Sbjct: 388 KGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N ++D LC +R+ +A + + ++ C P+ TY SLI+ L + R++ Y+ ++M
Sbjct: 447 VNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML 506
Query: 390 QKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
N +PN + + L+++ K E+ + M R GC N +
Sbjct: 507 DANQ--IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+K R ++E++ G PD RSYT++IHGL G +A F+ M+ +G V + R
Sbjct: 565 IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 181/421 (42%), Gaps = 17/421 (4%)
Query: 95 QNILKTCSVSTKG----EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
Q I C + G +E L + +L +L++ V+ R + D A +F+W R
Sbjct: 66 QVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLK-DVNNAVNYFRWAERLT 124
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMP----DLVNEKTYGILLNRYAAAHMVEE 206
D + +N++L V+ R R+F L Q+ +EM N I+L+ + + + E
Sbjct: 125 DRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLS-FIKSRKLRE 183
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
A ++ SA+ NL+ L + + T F+ + E GY ++ ++
Sbjct: 184 AFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQ-QMQELGYAVNVHLFTTLI 242
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ G V A ++ + EPD V Y ++ K GK+ A + F M G
Sbjct: 243 RVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLV 302
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
D VT +I LC R+ EA+E+ M +P YN++I + E Y
Sbjct: 303 LDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSL 362
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME--RNGCKMSTDTYNVILKLYV 442
L+ Q+ C+P+ +++N +L L + +V L++ E + + TYN+++ +
Sbjct: 363 LE--RQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLC 420
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ + M+ G+ P+ + +M+ L RL+DA S F + K P+
Sbjct: 421 KAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAV 480
Query: 503 T 503
T
Sbjct: 481 T 481
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 40/362 (11%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
SP + N +D + +A + +F E+ +L + ++Y IL++ A EA
Sbjct: 546 SPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYE 605
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIILNGW 267
+F KE G + D A+ ++ C+ V A E K + G++ + T +++G
Sbjct: 606 LFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK-GHEPTVVTYGSVIDGL 664
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
+ + EA +++ E + V Y++ ++ K G++ A + + + +KG P+V
Sbjct: 665 AKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 724
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T NC++DAL + I EAL + MK+ C PN TY+ LI LCKI++ + + E
Sbjct: 725 YTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQE 784
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
M+++ PN T+ ++ L K + + DT
Sbjct: 785 MQKQGFK--PNVFTYTTMISGLAKAGNI-------------VEADTL------------- 816
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
+E+ ++KG D Y +I GL + R DA F E RLKG +T +++
Sbjct: 817 ------FEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVL 870
Query: 508 ND 509
D
Sbjct: 871 LD 872
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 179/396 (45%), Gaps = 21/396 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGI 193
+E AY+ + R+G P +N IL LGR + E ++ F+EM + N TY I
Sbjct: 356 FEDAYSLLERQRRKGCI-PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNI 414
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
+++ A +E A+ V D K+ G ++ ++ LC+ + ++ A + FE
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFE------ 468
Query: 254 GYDIKTMNIILNGWCVL-------GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
G D KT +C L G V EA + ++ ++ + P++V Y + + K G
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCG 528
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ +++ M G PD++ N +D + I + + +E+KN G +P+ +Y
Sbjct: 529 RKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYT 588
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERME 423
LI L K YE M+++ C+ + +N ++ K +V +LE M+
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTMKEQ--GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 646
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G + + TY ++ D D+ +EE + KG+ + Y+ +I G GR++
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRID 706
Query: 484 DALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
+A E+ KG+ P T + D +K +E E
Sbjct: 707 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 165/379 (43%), Gaps = 41/379 (10%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+ +++ VL +A R E +++F+ M + Y ++ Y A E+A + +R++
Sbjct: 308 YTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQR 367
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
G + + ++ +L L R V+ A FE K + ++ T NI+++ C G + E
Sbjct: 368 RKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKL-E 426
Query: 276 AKRFWKDIIK-SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+D +K + P+ +T V+ L K +L A +F+ + K +PD VT +I
Sbjct: 427 TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM------ 388
+ L R+ EA ++ +M + +PN Y SLI++ K R E ++ +EM
Sbjct: 487 EGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCS 546
Query: 389 ---------------------------EQKNGSCLPNEITFNYLLKSLKKP---EEVPWV 418
E KN +P+ ++ L+ L K E +
Sbjct: 547 PDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYEL 606
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
M+ GC + T YN ++ + +K EEM+ KG P +Y +I GL
Sbjct: 607 FYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAK 666
Query: 479 KGRLEDALSYFHEMRLKGM 497
RL++A F E + KG+
Sbjct: 667 IDRLDEAYMLFEEAKSKGI 685
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 160/351 (45%), Gaps = 11/351 (3%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEA 207
D P + +N ++D+L +A + + V D M D N T I+++R A +++A
Sbjct: 404 DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDA 463
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILN 265
+F+ D + +L+ L R+ V+ A +E + N+ + ++I N
Sbjct: 464 CSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRN 523
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+ G + + + ++++ C PD + T+++ + K G++ LFQ + G P
Sbjct: 524 -FFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP 582
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D + +I L EA E+ MK +GC+ + YN++I CK ++ Y+ L
Sbjct: 583 DARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 642
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+EM+ K P +T+ ++ L K +E + E + G +++ Y+ ++ +
Sbjct: 643 EEMKTKGHE--PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
D+ EE+ +KG+ P+ ++ ++ L + +AL F M+
Sbjct: 701 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMK 751
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 193/438 (44%), Gaps = 47/438 (10%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A +FFK + G SP +N ++ L R +F+EM PD+V TY
Sbjct: 235 ALSFFKDMVVAG-LSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIV---TYN 290
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
L++ Y M+ A+ VF+ K+ G D+ + +L+ C+++ + A + K
Sbjct: 291 SLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQR 350
Query: 253 -FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
++ T + +++ +C G + EA +F+ D+I+ +P+ TY + ++A K G L A
Sbjct: 351 GLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEA 410
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+L M + G ++VT ++D LC R+ EA E+ + G N Y SL
Sbjct: 411 FKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHG 470
Query: 372 LCKIKRMETVYEYLDEMEQKN-------------GSCLPNEI----------------TF 402
K K ME + L+EM +KN G C NEI
Sbjct: 471 YIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTAN 530
Query: 403 NYLLKSL-------KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+Y+ +L K E +L+ M+ G K++ TY V++ + ++
Sbjct: 531 SYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFD 590
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLK 515
M + G+ P+ YT +I GL LE+A + F+EM KG+ P+ + D N+K
Sbjct: 591 HMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHG 650
Query: 516 ERGEQGKKVIKLTSLGLK 533
GE ++ +G++
Sbjct: 651 NPGEALSLRNRMVEIGME 668
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 177/459 (38%), Gaps = 81/459 (17%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
T ++++ + R D EAA + F+ + +G P +N+++D G+ + V
Sbjct: 251 VFTYNMVIGCLAR-EGDLEAARSLFEEMKAKG-LRPDIVTYNSLIDGYGKVGMLTGAVSV 308
Query: 179 FDEMPDLVNEK---TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
F+EM D E TY L+N + + +A K+ G ++ + L+ C+
Sbjct: 309 FEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCK 368
Query: 236 YKHVEVAETFFES------EKNEFGY------------------------------DIKT 259
+ A FF + NEF Y +I T
Sbjct: 369 AGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVT 428
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
+L+G C G + EA+ + ++K+ + Y + + K + A+ + + M
Sbjct: 429 YTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMN 488
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
+K KPD++ I LC + I +++ V+REM + G N Y +LI K+ +
Sbjct: 489 KKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTT 548
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNV 436
L EM+ +T+ L+ L K ++ + M RNG + + Y
Sbjct: 549 EAVNLLQEMQDLGIKI--TVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTA 606
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY-------- 488
++ DC ++ ++ + EM KG+ PD+ YT +I G G +ALS
Sbjct: 607 LIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIG 666
Query: 489 ---------------------------FHEMRLKGMVPE 500
EM KG++P+
Sbjct: 667 MELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPD 705
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 144/346 (41%), Gaps = 42/346 (12%)
Query: 159 FNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+ A+LD L GR R EL + +N++ Y L + Y A M+E+A+ + +
Sbjct: 429 YTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMN 488
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
+ DL + + LCR +E +M +I
Sbjct: 489 KKNLKPDLLLYGTKIWGLCRQNEIE-----------------DSMAVI------------ 519
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
++++ +S Y T ++A K GK A+ L Q M + G K VVT +ID
Sbjct: 520 -----REMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLID 574
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
LC + +A+ M G PN+ Y +LI LCK +E +EM K S
Sbjct: 575 GLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGIS- 633
Query: 396 LPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+++ + L+ K P E + RM G ++ Y ++ + + +
Sbjct: 634 -PDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKS 692
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+EM +KG+ PDQ ++ Y+ G + +AL+ +M +G++
Sbjct: 693 LLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLI 738
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 135/326 (41%), Gaps = 18/326 (5%)
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVY 274
K F E + F++ C H+ F+ ++ ++ W +LG +
Sbjct: 113 KFFKEAGARAGFRHAAESYCVLAHILFCGMFYLDARS-----------VIKEWILLGREF 161
Query: 275 EAKRFWKDIIKSK--CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
F+ + ++ C P + T N L G L A + F M + P V +CN
Sbjct: 162 PGCDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNE 221
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
++ L + AL ++M G P+V TYN +I L + +E +EM+ K
Sbjct: 222 LLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKG 281
Query: 393 GSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
P+ +T+N L+ K + V E M+ GC+ TYN ++ + ++ +
Sbjct: 282 --LRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQ 339
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
M+++G+ P+ +Y+ +I G L +A +F +M G+ P T + D
Sbjct: 340 AFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLID 399
Query: 510 MNIKLKERGEQGKKVIKLTSLGLKGN 535
N K+ + E K ++ G+ N
Sbjct: 400 ANCKIGDLNEAFKLESEMQQAGVNLN 425
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 16/258 (6%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFD 212
S ++ ++D + + E + + EM DL + TYG+L++ +V++A+ FD
Sbjct: 531 SYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFD 590
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLG 271
G ++ + L+ LC+ +E A+ F E D +++G G
Sbjct: 591 HMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHG 650
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
N EA +++ E D Y + + ++ G++ A L M KG PD V C
Sbjct: 651 NPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCI 710
Query: 332 CIIDALCFKKRIPEALEVLREMKNRG------------CLPNVTTYNSLIKHLCKIKRME 379
C++ I EAL + +M RG CL VT + L
Sbjct: 711 CLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSCLTAVTKLHKLCASQSGTDFHR 770
Query: 380 TVYEYLDEMEQKNGSCLP 397
T YL ++E+ + S +P
Sbjct: 771 TANLYLADVEEFSHSGMP 788
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 190/406 (46%), Gaps = 44/406 (10%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK--TYGILLN 196
A F ++ +G + + + +++ L +AR+ I++ ++M TYG++++
Sbjct: 96 AVQLFDEMTEKGLFGD-AKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIID 154
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGY 255
M EA+ +F G L D+ + +L+ LCR+ ++ A FF E E
Sbjct: 155 SLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISA 214
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ T N +++G G E F ++ PD+ T+ ++ L K+GK+G A ++
Sbjct: 215 DVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL 274
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ M KG++PD++T N +++ LC ++ +A ++ + +RG NV +YN LI CK
Sbjct: 275 ELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKD 334
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTD 432
++++ + +EM K P+ +T+N L+ +L + V + M+ G +
Sbjct: 335 QKIDEAFRLFEEMRPKG--LKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLS 392
Query: 433 TYNVIL-------------------------------KLYVNWDCE-DKVRHTW---EEM 457
TY V+L + ++ C K+ W +E+
Sbjct: 393 TYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEI 452
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K G+ PD +Y ++I+GL +KG L +A+ +M KG +P+ T
Sbjct: 453 SKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSIT 498
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 143/317 (45%), Gaps = 8/317 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD V T L+ + + +A+ +FD E G D + L+ LC+ + +A
Sbjct: 75 PDAVTVTT---LVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131
Query: 243 ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
E K D+ T +I++ C G EA + ++I + PD V Y++ ++ L
Sbjct: 132 IKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 191
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
+ G+L AL F+ M +G DV T N +I L E L M +RG P+
Sbjct: 192 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 251
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVL 419
T+ LI LCK ++ + L+ M K P+ +T+N L+ L + E+ +
Sbjct: 252 FTFTILIDGLCKEGKVGEAQQILELMHHKGKE--PDILTYNTLMNGLCLVGQLEDATKLF 309
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
E + G K++ +YN+++ Y D+ +EEM KG+ P +Y +I L
Sbjct: 310 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQS 369
Query: 480 GRLEDALSYFHEMRLKG 496
GR+ A F EM+ G
Sbjct: 370 GRVRTAQKLFVEMQTCG 386
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 134/258 (51%), Gaps = 8/258 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P +N +++ L + + ++F+ + D +N +Y IL+N Y ++EA +
Sbjct: 284 PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRL 343
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK--TMNIILNGWC 268
F+ + G + L+ LC+ V A+ F E G +K T ++L+G C
Sbjct: 344 FEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLF-VEMQTCGQFLKLSTYCVLLDGLC 402
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G++ EA ++ I K++ +P+ ++ ++ + + GKL A + F + + G +PD +
Sbjct: 403 KNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTI 462
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
N +I+ LC K + EA+++L +M+ +GCLP+ T+N +I++L K + + L+EM
Sbjct: 463 AYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEM 522
Query: 389 EQKNGSCLPNEITFNYLL 406
+N S P+E + LL
Sbjct: 523 RNRNFS--PDEAVTSMLL 538
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 108/251 (43%), Gaps = 39/251 (15%)
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR-------------------- 323
+K EPD+VT T V + + + A++LF M EKG
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
Query: 324 --------------KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
K DV T IID+LC EAL++ EM G LP+V Y+SL+
Sbjct: 129 GLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
LC+ R++ E+ EME + S + T+N L+ L + +EV W L M G
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISA--DVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 246
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
T+ +++ + + E M KG PD +Y +++GL G+LEDA
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDAT 306
Query: 487 SYFHEMRLKGM 497
F + +G+
Sbjct: 307 KLFESLADRGI 317
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 14/289 (4%)
Query: 81 EFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNV------INRYRF 134
E + G E I N L + G++E A E + +NV IN Y
Sbjct: 275 ELMHHKGKEPDILTYNTLMN-GLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 333
Query: 135 DW--EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEK 189
D + A+ F+ + +G P + +N ++ L ++ R ++F EM +
Sbjct: 334 DQKIDEAFRLFEEMRPKG-LKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLS 392
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
TY +LL+ +EEAI +F K+ ++ F LL +CR +E A + F E
Sbjct: 393 TYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEI 452
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
KN D NI++NG C G + EA + + + C PDS+T+ + L K+ ++
Sbjct: 453 SKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEI 512
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
A++L + M + PD + ++ F + AL L +G
Sbjct: 513 HEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 561
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
++G +PD VT ++ + + IP+A+++ EM +G + TY LI LCK ++
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERM-ERNGCKMSTD--TYNV 436
+ ++M+ G+C + T+ ++ SL K L+ E G + D Y+
Sbjct: 130 LAIKLHEKMK---GNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSS 186
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ + + ++EME +G+ D +Y +IHGL G ++ + + M +G
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 246
Query: 497 MVPEPRTGILVNDMNIKLKERGE 519
P+ T ++ D K + GE
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGE 269
>gi|414872586|tpg|DAA51143.1| TPA: empty pericarp4 [Zea mays]
Length = 595
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 139/292 (47%), Gaps = 4/292 (1%)
Query: 238 HVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
HV AE E + ++ +L GWC G + EAK + + D V + T
Sbjct: 170 HVLTAEQLVEELQPRLPLSLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVVFNT 229
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+ +G+ A L M ++G P+ V+ +I L + R+ EA+ V EM+ +G
Sbjct: 230 LLAGFVAEGRFEDAFELAGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKG 289
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP--EEV 415
C P+ TY +L+ CK ++ YE+LD M ++G + + + + KK EE
Sbjct: 290 CAPDAVTYGTLVNTFCKAGKISQGYEFLDAM-SRDGLRVDAAVYHGFFVAHEKKEQLEEC 348
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
++ERM C YNV+++L + W EME G+ P ++ +++ G
Sbjct: 349 LELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMTLWNEMESAGLSPVVDTFAIVVSG 408
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLK-ERGEQGKKVIK 526
L +G L +A SYF +M +G+ P+ G+L + +N ++ E+ E K V K
Sbjct: 409 LVGQGLLIEACSYFKDMVGRGLFVVPQYGVLKDLLNALVRDEKLELAKDVWK 460
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 125/318 (39%), Gaps = 50/318 (15%)
Query: 117 ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI 176
++ + + L+ + RF E A+ + + G P + + ++ LG R E +
Sbjct: 223 DVVVFNTLLAGFVAEGRF--EDAFELAGQMEQRG-CPPNAVSYTTLIQGLGARGRVDEAM 279
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAA----------------------------- 201
+VF EM PD V TYG L+N + A
Sbjct: 280 RVFVEMRRKGCAPDAV---TYGTLVNTFCKAGKISQGYEFLDAMSRDGLRVDAAVYHGFF 336
Query: 202 ------HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFG 254
+EE + + +R +E DL + ++ CR + A T + E E
Sbjct: 337 VAHEKKEQLEECLELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMTLWNEMESAGLS 396
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK--CEPDSVTYATFVNALTKKGKLGTAL 312
+ T I+++G G + EA ++KD++ P +NAL + KL A
Sbjct: 397 PVVDTFAIVVSGLVGQGLLIEACSYFKDMVGRGLFVVPQYGVLKDLLNALVRDEKLELAK 456
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+++ + KG + +V I AL KK + EA +M G +P T+ L+K L
Sbjct: 457 DVWKCIVSKGCELNVSAWTIWIHALFAKKHVKEACLYCLDMLEAGLMPQPDTFAKLMKGL 516
Query: 373 CKIKRMETVYEYLDEMEQ 390
K+ + E +++ +
Sbjct: 517 KKLYNRQIAAEITEKVRK 534
>gi|115445705|ref|NP_001046632.1| Os02g0304800 [Oryza sativa Japonica Group]
gi|113536163|dbj|BAF08546.1| Os02g0304800 [Oryza sativa Japonica Group]
Length = 617
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 182/417 (43%), Gaps = 39/417 (9%)
Query: 106 KGEIEKALNQCEL----TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNA 161
+ + +AL+ + L+ +++ V++ F A FF W P + N
Sbjct: 86 RAALHRALSSTGIDAAAALSPEVLSGVVSHGNFSGAATVDFFDWAIANSKLPPSVDTCNI 145
Query: 162 ILDVLGRARRF------VELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFD--- 212
++ LGR + F +E+++ PD+ T I+++ AA V AI + +
Sbjct: 146 VIRALGRRKFFAFFEPALEIMRKNGVSPDI---STLEIIIDSLIAARHVNTAIQLINTDH 202
Query: 213 ---------RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNI 262
+RKE F L+ LCR HV +A + ++ + E D N
Sbjct: 203 FGLGVWQTCQRKEI--------FTVLINCLCRRSHVGLASSLLQASRGETIDLDNHMYNE 254
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ GW G V + + FW+ +++ PD V+Y + AL + + AL++F+ M +G
Sbjct: 255 VIGGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMVHEG 314
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P + N +I ++ ++M + C PN+ TY +I+ + +++
Sbjct: 315 YCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNIDTYRKMIRAFLRERKVADAL 374
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK 439
+ DEM + LP+ ++ L P + +R + GC++S Y ++L+
Sbjct: 375 QMFDEMLSRG--ILPSTGMITLFIEPLCTFGPPHAALLIYKRSRKAGCRISMKAYKLLLE 432
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ V WEEM++ G D+ Y +++GL + G+++ A+S E KG
Sbjct: 433 RLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAAVSVVEESIRKG 489
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 7/181 (3%)
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P V TCN +I AL +K L M+ G P+++T +I L + + T +
Sbjct: 138 PSVDTCNIVIRALGRRKFFAFFEPALEIMRKNGVSPDISTLEIIIDSLIAARHVNTAIQL 197
Query: 385 LDEMEQKNG---SCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVIL 438
++ G +C EI F L+ L + V +L+ + YN ++
Sbjct: 198 INTDHFGLGVWQTCQRKEI-FTVLINCLCRRSHVGLASSLLQASRGETIDLDNHMYNEVI 256
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ + DKV H WE M + G+ PDQ SY +I L R E+AL F +M +G
Sbjct: 257 GGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMVHEGYC 316
Query: 499 P 499
P
Sbjct: 317 P 317
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 109/231 (47%), Gaps = 15/231 (6%)
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQ------AMWEKGRKPDVVTCNCIIDALC 338
K+ PD T +++L + TA++L +W+ ++ ++ T +I+ LC
Sbjct: 168 KNGVSPDISTLEIIIDSLIAARHVNTAIQLINTDHFGLGVWQTCQRKEIFTV--LINCLC 225
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
+ + A +L+ + + YN +I + R++ V + + M + +P+
Sbjct: 226 RRSHVGLASSLLQASRGETIDLDNHMYNEVIGGWARFGRVDKVEHFWETMLEDG--LVPD 283
Query: 399 EITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
++++ +L+++L + EE V E+M G +T YN ++ +++ D+ ++
Sbjct: 284 QVSYCHLIEALGRANRAEEALQVFEKMVHEGYCPTTMAYNALIFNFISVGNFDRCIKYYK 343
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGIL 506
+M P+ +Y MI + ++ DAL F EM +G++P TG++
Sbjct: 344 DMLDNNCPPNIDTYRKMIRAFLRERKVADALQMFDEMLSRGILPS--TGMI 392
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 14/230 (6%)
Query: 162 ILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDR-RKEFGEL 220
+++ LGRA R E +QVF++M V+E Y Y A ++G FDR K + ++
Sbjct: 290 LIEALGRANRAEEALQVFEKM---VHEG-YCPTTMAYNALIFNFISVGNFDRCIKYYKDM 345
Query: 221 DD------LSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
D + ++ ++ R + V A + F E + + + C G
Sbjct: 346 LDNNCPPNIDTYRKMIRAFLRERKVADALQMFDEMLSRGILPSTGMITLFIEPLCTFGPP 405
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+ A +K K+ C Y + L GK GT L++++ M E G D I
Sbjct: 406 HAALLIYKRSRKAGCRISMKAYKLLLERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFI 465
Query: 334 IDALCFKKRIPEALEVLREMKNRG-CLPNVTTYNSLIKHLCKIKRMETVY 382
++ LC ++ A+ V+ E +G CL V Y L L ++ ++ET Y
Sbjct: 466 VNGLCNVGKVDAAVSVVEESIRKGFCLGRV-VYGKLNNKLLEMNKVETAY 514
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 116 CELTLT-DDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE 174
C T+ + LI N I+ FD ++K + + + P + + ++ R R+ +
Sbjct: 316 CPTTMAYNALIFNFISVGNFD--RCIKYYKDM-LDNNCPPNIDTYRKMIRAFLRERKVAD 372
Query: 175 LIQVFDEMPDLVNEKTYGIL------LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
+Q+FDEM + G++ L + H A+ ++ R ++ G + A++
Sbjct: 373 ALQMFDEMLSRGILPSTGMITLFIEPLCTFGPPH---AALLIYKRSRKAGCRISMKAYKL 429
Query: 229 LLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
LL L + K V + + E +++ D + I+NG C +G V A ++ I+
Sbjct: 430 LLERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAAVSVVEESIRKG 489
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQ 316
V Y N L + K+ TA LF+
Sbjct: 490 FCLGRVVYGKLNNKLLEMNKVETAYNLFK 518
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 165/346 (47%), Gaps = 14/346 (4%)
Query: 165 VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
L A + +Q F PD+V TY LL + M+ EA + R K+ G +
Sbjct: 225 TLADALSTLSTMQGFGLSPDVV---TYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRA 281
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ L+ R ++ A E+ FG+ D+ T N++ G C G V EA + KD
Sbjct: 282 TYNTLVSAYARLGWIKQATNVVEA-MTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKL-KD 339
Query: 283 IIK--SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
++ S PD VTY T V+A K + AL L + M +KG K +VT N ++ LC +
Sbjct: 340 EMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCRE 399
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
++ EAL L+ M G P+V TYN+LI CK + + + +DEM + +
Sbjct: 400 GQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKM--DTF 457
Query: 401 TFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T N LL +L K+ EE +L + G +Y ++ Y + + + W+EM
Sbjct: 458 TLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEM 517
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K+ + P +Y +I GL G+L +A+ +E+ KG+VP+ T
Sbjct: 518 SKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTT 563
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 185/407 (45%), Gaps = 14/407 (3%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
+T +++V + R E A K ++ EG +P +N ++D +AR + +
Sbjct: 387 VTHNIVVKGLCR-EGQLEEALGRLKMMTEEG-LAPDVITYNTLIDAYCKARNVAKAFVLM 444
Query: 180 DEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
DEM ++ T LL EEA + + G + D ++ ++ +
Sbjct: 445 DEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKE 504
Query: 237 KHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
E A + E K + I T N ++ G C +G + EA +++K PD TY
Sbjct: 505 NKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTY 564
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
++A K+G L A + M E KPDVVTCN +++ LC ++ +A+++
Sbjct: 565 NIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAE 624
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KP 412
+G +V TYN+LI+ LCK ++T + +ME + P+ T+N +L +L +
Sbjct: 625 KGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARG--LQPDAFTYNVVLSALSEAGRS 682
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG--MGPDQRSYT 470
EE +L +++ +G K+S ++K K + E G G DQ SY
Sbjct: 683 EEAQNMLHKLDESG-KLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYN 741
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517
+ L G+L++A + EM KGM + T I + + IK ++R
Sbjct: 742 KSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQKR 788
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 14/229 (6%)
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
++ +I + P+ T+ V+ KG L AL M G PDVVT N ++ A C
Sbjct: 198 FRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCR 257
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK---IKRMETVYEYLDEMEQKNGSCL 396
K + EA +L MK G P TYN+L+ + IK+ V E + +
Sbjct: 258 KGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFE----- 312
Query: 397 PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD--TYNVILKLYVNWDCEDKVR 451
P+ T+N L L K +E + + ME +S D TYN ++ +
Sbjct: 313 PDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSI-VSPDVVTYNTLVDACFKYQRSSDAL 371
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ EEM KG+ ++ +++ GL +G+LE+AL M +G+ P+
Sbjct: 372 NLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPD 420
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+L +F+++ P+ T N ++ C K + +AL L M+ G P+V TYN+L+
Sbjct: 193 ASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLL 252
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNG 426
K C+ + L M+++ P T+N L+ + + ++ V+E M G
Sbjct: 253 KAHCRKGMLGEARTLLARMKKEG--IAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFG 310
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM-GPDQRSYTVMIHGLYDKGRLEDA 485
+ TYNV+ D+ +EME + PD +Y ++ + R DA
Sbjct: 311 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDA 370
Query: 486 LSYFHEMRLKGM 497
L+ EMR KG+
Sbjct: 371 LNLLEEMRDKGV 382
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 48/272 (17%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P +N ++ L + E I +E+ PD + TY I+++ Y +E+
Sbjct: 523 TPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPD---DTTYNIIIHAYCKEGDLEK 579
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIIL 264
A ++ E D+ L+ LC + +E A FES EK + D+ T N ++
Sbjct: 580 AFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGK-KVDVITYNTLI 638
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR- 323
C G+V A F+ D+ +PD+ TY ++AL++ G+ A + + E G+
Sbjct: 639 QALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKL 698
Query: 324 --------------------KPDVVT-C--------------NCIIDALCFKKRIPEALE 348
P+V + C N + LC ++ EA
Sbjct: 699 SERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKA 758
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
VL EM +G + +TY +L++ L K ++ +T
Sbjct: 759 VLDEMMQKGMSVDSSTYITLMEGLIKRQKRQT 790
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 177/364 (48%), Gaps = 18/364 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP FN +++ L + + + V D+M P++V TY L++ Y V +
Sbjct: 227 SPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVV---TYNTLIDGYCKMGRVGK 283
Query: 207 ---AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNI 262
A + E + F L+ C+ +++ A FE +++ + T N
Sbjct: 284 MYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNS 343
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++NG C G + EAK +++ S +P+ +TY +N KK L A LF + ++G
Sbjct: 344 LVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG 403
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P+V+T N ++ C ++ EA + + M +G LPN +TYN LI C+ +ME V
Sbjct: 404 LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVK 463
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK 439
L+EM+ + + +T+N L+ + K+P++ +++ M G K S TYN++L
Sbjct: 464 NLLNEMQCRGVK--ADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLN 521
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
Y + ++MEK+G + +Y V+I G KG+LEDA +EM KG++P
Sbjct: 522 GYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIP 581
Query: 500 EPRT 503
T
Sbjct: 582 NRTT 585
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 171/364 (46%), Gaps = 20/364 (5%)
Query: 148 REGDYSPGSNVF--NAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYA 199
R GDY +V N +L L + F + V+ EM P+L+ T+ ++N
Sbjct: 185 RAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLI---TFNTVINGLC 241
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV----EVAETFFESEKNEFGY 255
+ +A V D K +G ++ + L+ C+ V + E +N+
Sbjct: 242 KVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSP 301
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
+ T N++++G+C N+ A + ++++ +P VTY + VN L +GKL A L
Sbjct: 302 NSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLL 361
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M KP+V+T N +I+ C KK + EA E+ + +G PNV T+N+L+ CK
Sbjct: 362 DEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKF 421
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
+ME + M +K LPN T+N L+ K EEV +L M+ G K T
Sbjct: 422 GKMEEAFLLQKVMLEK--GFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTV 479
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TYN+++ + K +EM KG+ P +Y ++++G +G L AL+ +M
Sbjct: 480 TYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQM 539
Query: 493 RLKG 496
+G
Sbjct: 540 EKEG 543
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 150/295 (50%), Gaps = 10/295 (3%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCVLGNV---YEAK 277
+L F ++ LC+ + A + K F ++ T N +++G+C +G V Y+A
Sbjct: 229 NLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKAD 288
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
K+++++K P+SVT+ ++ K L AL++F+ M +G KP VVT N +++ L
Sbjct: 289 AILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGL 348
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C + ++ EA +L EM + PNV TYN+LI CK K +E E D + ++ + P
Sbjct: 349 CNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLT--P 406
Query: 398 NEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N ITFN LL K EE + + M G + TYN ++ + ++V++
Sbjct: 407 NVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLL 466
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
EM+ +G+ D +Y ++I +K + A EM KG+ P T IL+N
Sbjct: 467 NEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLN 521
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 161/348 (46%), Gaps = 12/348 (3%)
Query: 154 PGSNVFNAILD---VLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEA 207
P +N ++D +GR + + + EM + N T+ +L++ + + A
Sbjct: 263 PNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAA 322
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNG 266
+ VF+ + G + + +L+ LC + A+ E + ++ T N ++NG
Sbjct: 323 LKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALING 382
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C + EA+ + +I K P+ +T+ T ++ K GK+ A L + M EKG P+
Sbjct: 383 YCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPN 442
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
T NC+I C + ++ E +L EM+ RG + TYN LI C+ K + +D
Sbjct: 443 ASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLID 502
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVN 443
EM K P+ +T+N LL + L ++ME+ G + TYNV+++ Y
Sbjct: 503 EMLDKGLK--PSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCR 560
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
+ EM +KG+ P++ +Y ++ + +KG L D + +
Sbjct: 561 KGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYH 608
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 17/277 (6%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
+ AA F+ + +G P +N++++ L + E + DEM P+++
Sbjct: 318 NLSAALKVFEEMQSQG-LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVI-- 374
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY L+N Y ++EEA +FD + G ++ F LL C++ +E E F
Sbjct: 375 -TYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKME--EAFLLQ 431
Query: 249 E---KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ + F + T N ++ G+C G + E K ++ + D+VTY ++A +K
Sbjct: 432 KVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEK 491
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
+ A RL M +KG KP +T N +++ C + + AL + ++M+ G NV TY
Sbjct: 492 KEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTY 551
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
N LI+ C+ ++E L+EM +K +PN T+
Sbjct: 552 NVLIQGYCRKGKLEDANGLLNEMLEK--GLIPNRTTY 586
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 8/208 (3%)
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
++AL K+ + G +++ M + P+++T N +I+ LC ++ +A +V+ +MK G
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWG 260
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYE---YLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
PNV TYN+LI CK+ R+ +Y+ L EM + S PN +TFN L+ K E
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVS--PNSVTFNVLIDGFCKDEN 318
Query: 415 VPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
+ V E M+ G K + TYN ++ N ++ + +EM + P+ +Y
Sbjct: 319 LSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNA 378
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+I+G K LE+A F + +G+ P
Sbjct: 379 LINGYCKKKLLEEARELFDNIGKQGLTP 406
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+S+ V A + K L F+ + K V++CN ++ AL + V
Sbjct: 159 NSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVY 218
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS-- 408
+EM R PN+ T+N++I LCK+ ++ + +D+M K PN +T+N L+
Sbjct: 219 KEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDM--KVWGFWPNVVTYNTLIDGYC 276
Query: 409 ----LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
+ K + +L+ M N ++ T+NV++ + + +EEM+ +G+ P
Sbjct: 277 KMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKP 336
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+Y +++GL ++G+L +A EM + P
Sbjct: 337 TVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP 371
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 5/213 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILD---VLGRARRFVELIQVFDEMPDLVNEKTYGI 193
E A F + ++G +P FN +L G+ L +V E L N TY
Sbjct: 390 EEARELFDNIGKQG-LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNC 448
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE- 252
L+ + +EE + + + G D + L+ C K + A + ++
Sbjct: 449 LIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG 508
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
T NI+LNG+C+ GN+ A K + K + VTY + +KGKL A
Sbjct: 509 LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDAN 568
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
L M EKG P+ T I + + K +P+
Sbjct: 569 GLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPD 601
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 180/369 (48%), Gaps = 9/369 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTY--GIL 194
+++ ++F + +G + PGSN FN +L + + F + + F+E V+ Y GI+
Sbjct: 111 DSSISYFNEMVDKG-FVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIV 169
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEF 253
+ A +E++ + +EFG ++ + L+ C+ +E A + FFE K
Sbjct: 170 IKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGL 229
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
+ T ++++G G + ++ + + P+ TY +N K G+ A +
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFK 289
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
LF M E+G ++VT N +I LC + + EA +V+ +MK+ G PN+ TYN+LI C
Sbjct: 290 LFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFC 349
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMS 430
+ ++ +++ + S P+ +T+N L+ K + V++ ME G K S
Sbjct: 350 GVGKLGKALSLCRDLKSRGLS--PSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPS 407
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TY +++ + D +K ME+ G+ PD +Y+V+IHG KG++ +A F
Sbjct: 408 KITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 491 EMRLKGMVP 499
M K + P
Sbjct: 468 LMVAKKLEP 476
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 149/325 (45%), Gaps = 7/325 (2%)
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
+ Y +++N Y + ++ +I F+ + G + + F NLL ++ FF
Sbjct: 95 RLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE 154
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
K + D+ + I++ G C G + ++ ++ + P+ V Y T ++ K+G++
Sbjct: 155 SKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEI 214
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP-EALEVLREMKNRGCLPNVTTYNS 367
A LF M + G + T +I L FK I + E+ +M+ G PN+ TYN
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGL-FKNGIKKQGFEMYEKMQEDGVFPNLYTYNC 273
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMER 424
++ CK R + ++ DEM ++ SC N +T+N L+ L K E V+++M+
Sbjct: 274 VMNQHCKDGRTKDAFKLFDEMRERGVSC--NIVTYNTLIGGLCREMKANEANKVMDQMKS 331
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
+G + TYN ++ + K +++ +G+ P +Y +++ G KG
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSG 391
Query: 485 ALSYFHEMRLKGMVPEPRTGILVND 509
A EM +G+ P T ++ D
Sbjct: 392 AGKVVKEMEERGIKPSKITYTILID 416
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 12/222 (5%)
Query: 153 SPGSNVFNAILDV------LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
+P +N ++D LG+A ++ P LV TY IL++ +
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV---TYNILVSGFCKKGDTSG 391
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
A V +E G + L+ R ++E A S E G D+ T ++++
Sbjct: 392 AGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQL-RSPMEELGLTPDVHTYSVLI 450
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G+C+ G + EA R +K ++ K EP+ V Y T V K+G ALRLF+ M EK
Sbjct: 451 HGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELP 510
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
P+V + +I+ LC +++ EA ++ +M + G P+ + N
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILN 552
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 114/316 (36%), Gaps = 72/316 (22%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP----------------------- 325
E S Y +NA + L +++ F M +KG P
Sbjct: 91 ETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWR 150
Query: 326 -----------DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
DV + +I C I ++ ++L E++ G PNV Y +LI CK
Sbjct: 151 FFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCK 210
Query: 375 IKRMETVYEYLDEMEQ------------------KNG---------------SCLPNEIT 401
+E + EM + KNG PN T
Sbjct: 211 RGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYT 270
Query: 402 FNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
+N ++ K ++ + + M G + TYN ++ ++ ++M+
Sbjct: 271 YNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK 330
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKER 517
G+ P+ +Y +I G G+L ALS +++ +G+ P T ILV+ K
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390
Query: 518 GEQGKKVIKLTSLGLK 533
G GK V ++ G+K
Sbjct: 391 G-AGKVVKEMEERGIK 405
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY IL++ +A +E+AI + +E G D+ + L+ C + A F+
Sbjct: 410 TYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLM 469
Query: 249 -----EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
E N+ Y N ++ G+C G+ Y A R ++++ + + P+ +Y + L
Sbjct: 470 VAKKLEPNKVIY-----NTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
K+ K A L + M + G P N I A
Sbjct: 525 KERKSKEAEGLVEKMIDTGIDPSDSILNLISRA 557
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 183/380 (48%), Gaps = 11/380 (2%)
Query: 128 VINRY--RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD- 184
+IN Y + ++F + G + PGSN FN +L + + F + F+E
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNG-FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK 158
Query: 185 -LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA- 242
+++ ++GIL+ A +E++ + EFG ++ + L+ C+ +E A
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 243 ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
+ FFE K + +T +++NG G + ++ + + P+ TY +N L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K G+ A ++F M E+G ++VT N +I LC + ++ EA +V+ +MK+ G PN+
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VL 419
TYN+LI C + ++ +++ + S P+ +T+N L+ + + ++
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS--PSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+ ME G K S TY +++ + D +K ME+ G+ PD +Y+V+IHG K
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 480 GRLEDALSYFHEMRLKGMVP 499
G++ +A F M K P
Sbjct: 457 GQMNEASRLFKSMVEKNCEP 476
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 151/325 (46%), Gaps = 7/325 (2%)
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
+ Y +++N Y + + +I F+ + G + + F LL ++ +FF
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
K++ D+ + I++ G C G + ++ ++ + P+ V Y T ++ KKG++
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP-EALEVLREMKNRGCLPNVTTYNS 367
A LF M + G + T +I+ L FK + + E+ +M+ G PN+ TYN
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGL-FKNGVKKQGFEMYEKMQEDGVFPNLYTYNC 273
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMER 424
++ LCK R + ++ DEM ++ SC N +T+N L+ L K E V+++M+
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSC--NIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
+G + TYN ++ + K +++ +G+ P +Y +++ G KG
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 485 ALSYFHEMRLKGMVPEPRTGILVND 509
A EM +G+ P T ++ D
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILID 416
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 163/365 (44%), Gaps = 11/365 (3%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E +SP ++ ++D + + +F EM L NE+TY +L+N + +
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKK 250
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
+ ++++ +E G +L + ++ LC+ + A + F E + +I T N ++
Sbjct: 251 QGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G C + EA + + P+ +TY T ++ GKLG AL L + + +G
Sbjct: 311 GGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P +VT N ++ C K A ++++EM+ RG P+ TY LI + ME +
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
ME+ +P+ T++ L+ + E + + M C+ + YN ++ Y
Sbjct: 431 RLSMEEL--GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGY 488
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ +EME+K + P+ SY MI L + + ++A +M G+ +P
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI--DP 546
Query: 502 RTGIL 506
T IL
Sbjct: 547 STSIL 551
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 159/347 (45%), Gaps = 18/347 (5%)
Query: 106 KGEIEKA------LNQCELTLTDDLIVNVINRYRFDW--EAAYTFFKWVSREGDYSPGSN 157
KGEIEKA + + L + +IN + + + ++ + +G + P
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF-PNLY 269
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
+N +++ L + R + QVFDEM + N TY L+ + EA V D+
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNV 273
K G +L + L+ C + A + K+ + T NI+++G+C G+
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
A + K++ + +P VTY ++ + + A++L +M E G PDV T + +
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I C K ++ EA + + M + C PN YN++I CK + L EME+K
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Query: 394 SCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
+ PN ++ Y+++ L +K +E ++E+M +G ST ++I
Sbjct: 510 A--PNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 184/410 (44%), Gaps = 36/410 (8%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
+V + R+ F W+ R+ Y +N LD L +A + F +M
Sbjct: 7 VVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQR 66
Query: 183 ----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
PD + TY I+L A +++A + + +E G ++ + ++ C+
Sbjct: 67 RGYPPD---DFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASR 123
Query: 239 VEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
V+ A F++ G D+ T N +L G C + EA ++ + K+ CEP+ ++Y+
Sbjct: 124 VDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYS 183
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
T ++ L K G+L A RL++ M EK PD+V + LC R+ EA + R+M +
Sbjct: 184 TLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK 243
Query: 357 GCLPNVTTY-----------------NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
G + + N +I+HLC+ ++ + +EM +N P+
Sbjct: 244 GSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHP--PSA 301
Query: 400 ITFNYLLKSLKKPEEVP---WVLERMERNG---CKMSTDTYNVILKLYVNWDCEDKVRHT 453
FN L+ ++ K + +P + +RM+ C + +TYN+++ D+ +
Sbjct: 302 ELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQEL 361
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
EM G+ PD +Y+ ++ GL G+L+ A EM +G+ P+ T
Sbjct: 362 VNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFT 411
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 175/388 (45%), Gaps = 27/388 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILL 195
AY F+ + R G Y P ++ +L L G + EL+ E +N TY +++
Sbjct: 57 AYEKFQQMQRRG-YPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVI 115
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGE-LDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEF 253
+ A V++A+ +F G + D+ F +LL LC + + A FE K
Sbjct: 116 DGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGC 175
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
++ + + +L+G C G + EA R W+++++ C PD V Y +FV L K ++ A
Sbjct: 176 EPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACD 235
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKR-----------------IPEALEVLREMKNR 356
+ M KG K D V + +I LC K + EA + EM +R
Sbjct: 236 CCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISR 295
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ-KNGSCLPNEITFNYLLKSL---KKP 412
P+ +N+LI +CK KR+ M+ K C PN T+N ++ +L K+
Sbjct: 296 NHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQL 355
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+E ++ M G TY+ ++ D+ EEM K+G+ PD + +
Sbjct: 356 DEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASI 415
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++ L G+++ ALS+ M+ +G P+
Sbjct: 416 LNALSKAGKVDYALSHLETMKARGSTPD 443
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 176/374 (47%), Gaps = 35/374 (9%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+ F+++++ G P ++ +LD L +A R E ++++EM PDLV Y
Sbjct: 163 AFVLFEYMAKAG-CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLV---AYT 218
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
+ A+ V EA + G D AF ++ LC+ H E A+
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ--------- 269
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
N ++ C G + EA + ++++I P + + T ++A+ K +L +
Sbjct: 270 --------NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321
Query: 313 RLFQ---AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
LFQ +M E P++ T N ++D LC K++ EA E++ EM N G P+V TY++L+
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALV 381
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKM 429
LCK+ +++ + L+EM ++ P+ T +L +L K +V + L +E +
Sbjct: 382 DGLCKLGKLDRACDLLEEMSKEG--VFPDSFTDASILNALSKAGKVDYALSHLETMKARG 439
Query: 430 STD---TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
ST TYN +L D+ +M PD SYT++I L G+ A
Sbjct: 440 STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAH 499
Query: 487 SYFHEMRLKGMVPE 500
+ F EM +G++P+
Sbjct: 500 AIFQEMVKRGVLPD 513
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 167/381 (43%), Gaps = 43/381 (11%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
KG E+A NQ ++ + R EA TF + +SR ++ P + +FN ++
Sbjct: 262 KGHAEEAQNQ---------MIEHLCRSGMLDEACKTFEEMISR--NHPPSAELFNTLIHA 310
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+ +++R + + +F M + KEF +L
Sbjct: 311 VCKSKRLPDGVLLFQRMKSM-----------------------------KEFYCPPNLET 341
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ ++ LC+ K ++ A+ N D+ T + +++G C LG + A +++
Sbjct: 342 YNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS 401
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K PDS T A+ +NAL+K GK+ AL + M +G PD+VT N ++D LC RI
Sbjct: 402 KEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRID 461
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA+ L +M C P+V +Y +I LC+ + + EM ++ LP+ + ++
Sbjct: 462 EAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG--VLPDTVLYHS 519
Query: 405 LLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
LL L + LE ++ + CK + +++ + E M G
Sbjct: 520 LLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPA 579
Query: 465 DQRSYTVMIHGLYDKGRLEDA 485
D +Y ++ GL G+++ A
Sbjct: 580 DAFTYINVVRGLRKLGKVDKA 600
>gi|255580386|ref|XP_002531020.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529395|gb|EEF31358.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 530
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 178/390 (45%), Gaps = 11/390 (2%)
Query: 119 TLTDDLIVNVINRY---RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE- 174
L+ D + NV+ R + A FF++ R ++P S F L +L R R F +
Sbjct: 89 ALSTDFVENVLGRLFAAHSNGLKALEFFRFSLRHSHFNPSSFAFEMTLHILARMRYFEKA 148
Query: 175 ---LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKE---FGELDDLSAFQN 228
++++ P L+ K+ GI+L++ A E+ + F R ++ G+ F
Sbjct: 149 WELMMEIGKSHPSLLTLKSMGIMLSKIAKFQSYEDTLEAFKRMEKTVFVGKTFGTEEFNV 208
Query: 229 LLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
LL C + V+ A + F+ ++F + KTMNI+L G+ ++ + F+ +I++
Sbjct: 209 LLQAFCSQREVKEARSVFQKMHDQFNPNTKTMNILLLGFKKARDITAMELFYHEIVRRGF 268
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
+ S+TY ++A KKG G LR+F+ M + P + T +I + I +A
Sbjct: 269 KATSLTYNIRIDAYCKKGYFGDGLRIFEEMEKDNCPPTLETITTLIHGAGVARNIHKARH 328
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN-GSCLPNEITFNYLLK 407
+ E+ R P+ YN+LI L K K +E+ +DEME+K+ G T + L
Sbjct: 329 LFDEIGKRNLKPDTGAYNALISSLVKCKDIESAMRLMDEMEEKHIGRDSVTYHTIFFGLM 388
Query: 408 SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
L E V + RM T T +++K + D W+ M KG P
Sbjct: 389 KLNDTEGVCDLYHRMISRDFVPKTRTVVMLMKFFCVNSRLDLGLAFWQYMLDKGYCPHGH 448
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ +++ GL +GRL +A + +GM
Sbjct: 449 ALDLLVTGLCSRGRLLEAYECSKQFVERGM 478
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 110/270 (40%), Gaps = 12/270 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D A F+ + R G + S +N +D + F + +++F+EM P L
Sbjct: 252 DITAMELFYHEIVRRG-FKATSLTYNIRIDAYCKKGYFGDGLRIFEEMEKDNCPPTL--- 307
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-E 247
+T L++ A + +A +FD + D A+ L+ L + K +E A E
Sbjct: 308 ETITTLIHGAGVARNIHKARHLFDEIGKRNLKPDTGAYNALISSLVKCKDIESAMRLMDE 367
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E+ G D T + I G L + + +I P + T + +
Sbjct: 368 MEEKHIGRDSVTYHTIFFGLMKLNDTEGVCDLYHRMISRDFVPKTRTVVMLMKFFCVNSR 427
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L L +Q M +KG P + ++ LC + R+ EA E ++ RG + Y
Sbjct: 428 LDLGLAFWQYMLDKGYCPHGHALDLLVTGLCSRGRLLEAYECSKQFVERGMRMSEVVYRM 487
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
L + L + + + E LD+M +K S LP
Sbjct: 488 LERSLQQSDFTDKLRE-LDQMIKKLQSVLP 516
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 167/365 (45%), Gaps = 19/365 (5%)
Query: 145 WVSREGD-YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAA 200
W E D Y P F ++DVL +AR F E FD M L N TY L+
Sbjct: 355 WSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLR 414
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKT 259
A +E+A+ + D + G + + + + + ETF + + +I
Sbjct: 415 AGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVA 474
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N L +G + EAK + + ++ PDSVTY + +K G++ A+ L M
Sbjct: 475 CNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI 534
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
G +PDV+ N +ID+L R+ EA ++ MK+ P V TYN+L+ L K R++
Sbjct: 535 RNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQ 594
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNV 436
E + M K C PN I+FN LL K +EV L+ +M CK TYN
Sbjct: 595 KAIELFESMIXKK--CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNT 652
Query: 437 ILKLYVNWDCEDKVRHT--WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS----YFH 490
++ + E+KV H + KK M PD + ++ GL G++ DA+S + +
Sbjct: 653 VIYGLIK---ENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMY 709
Query: 491 EMRLK 495
++R +
Sbjct: 710 QVRFR 714
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 177/430 (41%), Gaps = 86/430 (20%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P F + VLGRA + E ++F M PDLV TY +L++ A +E A
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLV---TYTVLIDALCNAGQLENA 316
Query: 208 -------------------IGVFDRRKEFGELD----------------DLSAFQNLLLW 232
I + D+ +FG+LD D+ F L+
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376
Query: 233 LCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LC+ + + A TF K ++ T N ++ G G + +A + + +P
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPT 436
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL-------------- 337
+ TY TF++ K G+ G A+ F+ M KG P++V CN + +L
Sbjct: 437 AYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFN 496
Query: 338 -------------------CFKK--RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
C+ K ++ EA+ +L EM GC P+V NSLI L K
Sbjct: 497 GLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAG 556
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER---NGCKMSTDT 433
R++ ++ D M+ S P +T+N LL L K V +E E C +T +
Sbjct: 557 RVDEAWQMFDRMKDMKLS--PTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTIS 614
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
+N +L + D + + +M PD +Y +I+GL + ++ A +FH+++
Sbjct: 615 FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674
Query: 494 LKGMVPEPRT 503
K M P+ T
Sbjct: 675 -KSMHPDHVT 683
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 181/412 (43%), Gaps = 19/412 (4%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD 184
+++++ + F EA + + VS EG P ++A++ LG+ R ++ + EM D
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVS-EG-LKPSLKTYSALMVALGKKRDSEMVMVLLKEMED 255
Query: 185 L---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
L N T+ I + A ++EA +F R + G DL + L+ LC +E
Sbjct: 256 LGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLEN 315
Query: 242 A-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A E F + + N D +L+ + G++ K FW + PD VT+ V+
Sbjct: 316 AKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVD 375
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K A F M ++G P++ T N +I L RI +AL++L M++ G P
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQP 435
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN---YLLKSLKKPEEVPW 417
TY + I + K E ++M+ K +PN + N Y L + + E
Sbjct: 436 TAYTYITFIDYFGKSGETGKAVETFEKMKAK--GIVPNIVACNASLYSLAEMGRLREAKT 493
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ + NG + TYN+++K Y D+ + EM + G PD +I LY
Sbjct: 494 MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLY 553
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK--KVIKL 527
GR+++A F M+ + P T N L G++G+ K I+L
Sbjct: 554 KAGRVDEAWQMFDRMKDMKLSPTVVT------YNTLLSGLGKEGRVQKAIEL 599
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 156/343 (45%), Gaps = 49/343 (14%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A+ FK + G +P + FN +L V G++ + EL +++ EM PD + T
Sbjct: 805 EKAWDLFKDMKNVG-CAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAI---T 860
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y I+++ A ++ +++A+ + F++
Sbjct: 861 YNIVISSLAKSNNLDKAL----------------------------------DFFYDLVS 886
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
++F +T +++G +G + EA R ++++ C+P+ + +N K G T
Sbjct: 887 SDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTET 946
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A +LF+ M +G +PD+ + ++D LC R+ EAL E+K+ G P+ YN +I
Sbjct: 947 ACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIIN 1006
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGC 427
L K +RME +EM +N +P+ T+N L+ +L E+ + E ++ G
Sbjct: 1007 GLGKSQRMEEALALYNEM--RNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGL 1064
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+ TYN +++ Y + + ++ M G P+ +Y
Sbjct: 1065 EPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYA 1107
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 22/308 (7%)
Query: 229 LLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW-CVLGNVYE------AKRFWK 281
L+ LC++K A F+ + G ++ L + C++G + E A +K
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLG-----ISPTLASYNCLIGELLEVHYTEKAWDLFK 812
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
D+ C PD+ T+ + K GK+ L++ M + KPD +T N +I +L
Sbjct: 813 DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN 872
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ +AL+ ++ + P TY LI L K+ R+E +EM + C PN
Sbjct: 873 NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS--DYGCKPNCAI 930
Query: 402 FNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
FN L+ K E + +RM G + +Y +++ D+ + + E++
Sbjct: 931 FNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELK 990
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG 518
G+ PD +Y +I+GL R+E+AL+ ++EMR +G+VP+ T N + + L G
Sbjct: 991 STGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYT---YNSLMLNLGLAG 1047
Query: 519 --EQGKKV 524
EQ K++
Sbjct: 1048 MVEQAKRM 1055
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 13/287 (4%)
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
N + Y+ +I +G+C EA ++ ++ +P TY+ + AL KK
Sbjct: 191 NAYSYNGLIHLLIQSGFCG-----EALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEM 245
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
+ L + M + G +P+V T I L +I EA E+ R M + GC P++ TY LI
Sbjct: 246 VMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGC 427
LC ++E E +M + NG P+++ + LL ++ E +ME +G
Sbjct: 306 ALCNAGQLENAKELFVKM-KANGH-KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
T+ +++ + D+ T++ M K+G+ P+ +Y +I GL GR+EDAL
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKG 534
M G+ P T I D + GE GK V + KG
Sbjct: 424 LLDTMESVGVQPTAYTYITFIDY---FGKSGETGKAVETFEKMKAKG 467
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 198/494 (40%), Gaps = 96/494 (19%)
Query: 96 NILKTCSVSTKGEIEKALN--------QCE--LTLTDDLIVNVINRYRFDWEAAYTFFKW 145
N++ C S G++++A+N CE + + + LI ++ R D A+ F
Sbjct: 511 NMMMKC-YSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD--EAWQMFDR 567
Query: 146 VSREGDYSPGSNVFNAILDVLG---RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAH 202
+ ++ SP +N +L LG R ++ +EL + N ++ LL+ +
Sbjct: 568 M-KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKND 626
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI 262
VE A+ +F + D+ + ++ L + V A FF K D T+
Sbjct: 627 EVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICT 686
Query: 263 ILNGWCVLGNVYEA----------------KRFWKD---------------------IIK 285
+L G G + +A + FW+D ++
Sbjct: 687 LLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLN 746
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK-GRKPDVVTCNCIIDALCFKKRIP 344
C DS V L K + A ++F +K G P + + NC+I L
Sbjct: 747 GICREDSFLIP-LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTE 805
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A ++ ++MKN GC P+ T+N L+ K ++ ++E EM + C P+ IT+N
Sbjct: 806 KAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR--CKPDAITYNI 863
Query: 405 LLKSLKKP--------------------------------------EEVPWVLERMERNG 426
++ SL K EE + E M G
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYG 923
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
CK + +N+++ Y + ++ M +G+ PD +SYT+++ L GR+++AL
Sbjct: 924 CKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEAL 983
Query: 487 SYFHEMRLKGMVPE 500
YF+E++ G+ P+
Sbjct: 984 YYFNELKSTGLDPD 997
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 138/302 (45%), Gaps = 7/302 (2%)
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCR-YKHVEVAETFFE-SEKNEFGYDIKTMNIIL 264
A+ F EF + + N +L R + VE FE +K D+ T I
Sbjct: 105 ALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIF 164
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ G + + + K+ ++ +Y ++ L + G G AL +++ M +G K
Sbjct: 165 KALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLK 224
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P + T + ++ AL K+ + +L+EM++ G PNV T+ I+ L + +++ YE
Sbjct: 225 PSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEI 284
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
M+ + C P+ +T+ L+ +L + E + +M+ NG K Y +L +
Sbjct: 285 FRRMDDE--GCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
++ D + W +ME G PD ++T+++ L ++A + F MR +G++P
Sbjct: 343 NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNL 402
Query: 502 RT 503
T
Sbjct: 403 HT 404
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 6/231 (2%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRY 198
F+ VS D+ P + ++D L + R E +++F+EM D N + IL+N Y
Sbjct: 881 FYDLVS--SDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGY 938
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDI 257
E A +F R G DL ++ L+ LC V+ A +F E + D
Sbjct: 939 GKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDF 998
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
N I+NG + EA + ++ PD TY + + L G + A R+++
Sbjct: 999 IAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEE 1058
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
+ G +PDV T N +I + A V + M GC PN+ TY L
Sbjct: 1059 LQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D E A FK + EG P + ++D L A R E + F+E+ PD +
Sbjct: 943 DTETACQLFKRMVNEG-IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFI-- 999
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
Y ++N + +EEA+ +++ + G + DL + +L+L L VE A+ +E
Sbjct: 1000 -AYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEE 1058
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ D+ T N ++ G+ + N A +K+++ C P+ TYA N
Sbjct: 1059 LQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 184/389 (47%), Gaps = 43/389 (11%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK--TYGILLNRYAAAHMVEEAIGVFDR 213
+ + +++ L +AR+ I++ ++M TYG++++ M EA+ +F
Sbjct: 1051 AKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSE 1110
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGN 272
G L D+ + +L+ LCR+ ++ A FF E E D+ T N +++G G
Sbjct: 1111 MIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGL 1170
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
E F ++ PD+ T+ ++ L K+GK+G A ++ + M KG++PD++T N
Sbjct: 1171 WKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNT 1230
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+++ LC ++ +A ++ + +RG NV +YN LI CK ++++ + + +EM K
Sbjct: 1231 LMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKG 1290
Query: 393 GSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVIL----------- 438
P+ +T+N L+ +L + V + M+ G + TY V+L
Sbjct: 1291 LK--PSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEE 1348
Query: 439 --------------------KLYVNWDCE-DKVRHTW---EEMEKKGMGPDQRSYTVMIH 474
+ ++ C K+ W +E+ K G+ PD +Y ++I+
Sbjct: 1349 AMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILIN 1408
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
GL +KG L +A+ +M KG +P+ T
Sbjct: 1409 GLCNKGMLSEAVKLLWQMEEKGCLPDSIT 1437
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 166/355 (46%), Gaps = 11/355 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P V+++++D L R R E ++ F EM + TY L++ + A + +E
Sbjct: 1118 PDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWF 1177
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG-YDIKTMNIILNGWCV 269
+ + G D F L+ LC+ V A+ E +++ DI T N ++NG C+
Sbjct: 1178 LNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCL 1237
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+G + +A + ++ + + + +Y +N K K+ A R F+ M KG KP VT
Sbjct: 1238 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVT 1297
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I ALC R+ A ++ EM+ G ++TY L+ LCK +E + ++
Sbjct: 1298 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD- 445
+ PN F+ LL + K EE + + +NG + T YN+++ N
Sbjct: 1358 KTEHK--PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGM 1415
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ V+ W+ ME+KG PD ++ V+I L + + +A+ EMR + P+
Sbjct: 1416 LSEAVKLLWQ-MEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 137/296 (46%), Gaps = 5/296 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNII 263
+ +A+ +FD + G L D + L+ LC+ + +A E K D+ T +I
Sbjct: 1032 IPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMI 1091
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ C G EA + ++I + PD V Y++ ++ L + G+L AL F+ M +G
Sbjct: 1092 IDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGI 1151
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
DV T N +I L E L M +RG P+ T+ LI LCK ++ +
Sbjct: 1152 SADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQ 1211
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
L+ M K P+ +T+N L+ L + E+ + E + G K++ +YN+++
Sbjct: 1212 ILELMRHKGKE--PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 1269
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
Y D+ +EEM KG+ P +Y +I L GR+ A F EM+ G
Sbjct: 1270 YCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 1325
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 133/258 (51%), Gaps = 8/258 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P +N +++ L + + ++F+ + D +N +Y IL+N Y ++EA
Sbjct: 1223 PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRF 1282
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK--TMNIILNGWC 268
F+ + G + L+ LC+ V A+ F E G +K T ++L+G C
Sbjct: 1283 FEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLF-VEMQTCGQFLKLSTYCVLLDGLC 1341
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G++ EA ++ I K++ +P+ ++ ++ + + GKL A + F + + G +PD +
Sbjct: 1342 KNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTI 1401
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
N +I+ LC K + EA+++L +M+ +GCLP+ T+N +I++L K + + L+EM
Sbjct: 1402 AYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEM 1461
Query: 389 EQKNGSCLPNEITFNYLL 406
+N S P+E + LL
Sbjct: 1462 RNRNFS--PDEAVTSMLL 1477
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 14/289 (4%)
Query: 81 EFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNV------INRYRF 134
E R+ G E I N L + G++E A E + +NV IN Y
Sbjct: 1214 ELMRHKGKEPDILTYNTLMN-GLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 1272
Query: 135 DW--EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEK 189
D + A+ FF+ + +G P + +N ++ L ++ R ++F EM +
Sbjct: 1273 DQKIDEAFRFFEEMRPKG-LKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLS 1331
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
TY +LL+ +EEA+ +F K+ ++ F LL +CR +E A + F E
Sbjct: 1332 TYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEI 1391
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
KN D NI++NG C G + EA + + + C PDS+T+ + L K+ ++
Sbjct: 1392 SKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEI 1451
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
A++L + M + PD + ++ F + AL L +G
Sbjct: 1452 HEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 1500
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 136/317 (42%), Gaps = 9/317 (2%)
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET---FFESEKNEFGYDIKTMNIILN 265
G + ++ G LS F+ + CR+ +++ + F S +E T N +L
Sbjct: 895 GSNSKSEKIGTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLA 954
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
LG ++ I +PD T ++ +G +F ++G +P
Sbjct: 955 SVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEP 1014
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D VT ++ + + IP+A+++ EM +G L + TY LI LCK ++ +
Sbjct: 1015 DAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLH 1074
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERM-ERNGCKMSTD--TYNVILKLYV 442
++M+ G+C + T+ ++ +L K L+ E G + D Y+ ++
Sbjct: 1075 EKMK---GNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 1131
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ + ++EME +G+ D +Y +IHGL G ++ + + M +G P+
Sbjct: 1132 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAF 1191
Query: 503 TGILVNDMNIKLKERGE 519
T ++ D K + GE
Sbjct: 1192 TFTILIDGLCKEGKVGE 1208
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 135/260 (51%), Gaps = 12/260 (4%)
Query: 252 EFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ GY D T+N +L G C+ G V EA F +I+ + D V+Y T +N L K G+
Sbjct: 116 KLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETR 175
Query: 310 TALRLFQAMWEKGR---KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
AL+L + + +G +PDV+ IID+ C K + +A ++ EM + PNV T+N
Sbjct: 176 AALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFN 233
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERME 423
SLI C + +++ L+EM N + PN TFN L+ L K EV VL M
Sbjct: 234 SLIYGFCIVGQLKEAVGLLNEMSLNNVN--PNVYTFNILIDGLCKEGEVKKATSVLSVMI 291
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+ G + + TY ++ Y +K +H + + +G+ P+ SY+VMI+GL ++
Sbjct: 292 KQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVD 351
Query: 484 DALSYFHEMRLKGMVPEPRT 503
+A+ F EM LK M P T
Sbjct: 352 EAVKLFKEMHLKNMTPNTVT 371
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 169/346 (48%), Gaps = 15/346 (4%)
Query: 167 GRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
G R ++L++ + + PD++ Y +++ + +V +A ++ +
Sbjct: 172 GETRAALQLLRKIEGLLLVRPDVI---MYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPN 228
Query: 223 LSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ F +L+ C ++ A E N ++ T NI+++G C G V +A
Sbjct: 229 VVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLS 288
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+IK EP+ VTY + ++ ++ A +F + +G P+V + + +I+ LC K
Sbjct: 289 VMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNK 348
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ EA+++ +EM + PN TY+SLI LCK R+ V++ +DE+ + N IT
Sbjct: 349 MVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPA--NIIT 406
Query: 402 FNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEM 457
+N LL L K +V +L +M+ G + TY ++ L N +D R ++++
Sbjct: 407 YNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQR-IYQDL 465
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
KG + R YTVMI+GL +G ++ALS +M G +P+ T
Sbjct: 466 LCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVT 511
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 158/349 (45%), Gaps = 15/349 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++ AI+D + + ++ ++ EM P++V T+ L+ + ++EA
Sbjct: 192 PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV---TFNSLIYGFCIVGQLKEA 248
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNG 266
+G+ + ++ F L+ LC+ V+ A + K ++ T +++G
Sbjct: 249 VGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDG 308
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ ++ V +AK + I P+ +Y+ +N L K + A++LF+ M K P+
Sbjct: 309 YFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPN 368
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VT + +ID LC RI + +++ E+ NRG N+ TYNSL+ LCK +++ L
Sbjct: 369 TVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLT 428
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+M K+ P+ T+ L+ L K ++ + + + G ++ Y V++
Sbjct: 429 KM--KDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCK 486
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
D+ +ME G PD +Y +I L+ + A+ EM
Sbjct: 487 EGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETF 245
N +Y +++N MV+EA+ +F + + +L+ LC+ + +V +
Sbjct: 333 NVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLI 392
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E +I T N +LNG C V +A + +PD TY T V+ L K
Sbjct: 393 DEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKN 452
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G+L A R++Q + KG ++ +I+ LC + EAL +L +M++ GC+P+ TY
Sbjct: 453 GRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTY 512
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
+LI L K + + L EM + C
Sbjct: 513 ETLISALFKNNKNGKAVKLLREMIARESDC 542
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P + +++L K A+ Q M KG +P++ T N +I+ ++ A +
Sbjct: 51 PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+ ++ G P+ T N+L++ LC +++ + D + +K +++++ L+ L
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHL--DQVSYGTLINGL 168
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV----RHTWEEMEKKGMGPD 465
K E L+ + + + ++ ++ C+DK+ + EM K + P+
Sbjct: 169 CKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPN 228
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
++ +I+G G+L++A+ +EM L + P T IL++ +
Sbjct: 229 VVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGL 274
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 173/367 (47%), Gaps = 14/367 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A++ + + G Y P + N + + + + D++ L +++ +YG L+
Sbjct: 124 AFSVLAKILKMG-YEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLI 182
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELD--DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNE 252
N A+ + R+ G+L D+ + ++ +C+ K+V A + + E
Sbjct: 183 NGLCKVGETRAALELL--RRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRR 240
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+I T + +++G+C++G + +A + + PD T+ V+A K+G++ A
Sbjct: 241 ISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAK 300
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
M ++G KPD+VT N ++D C + A +L M +RG V +YN +I
Sbjct: 301 NGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGF 360
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKM 429
CKIK ++ + EM K PN IT+N L+ L K + + LE M G +
Sbjct: 361 CKIKMVDQAMKLFKEMHHKQ--IFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQP 418
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TY+ IL DK +++ +G+ P+ +YT++I GL GRLEDA + F
Sbjct: 419 DIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIF 478
Query: 490 HEMRLKG 496
++ +KG
Sbjct: 479 EDLLVKG 485
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 157/314 (50%), Gaps = 15/314 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
++A++ + + I +F++M PD+ T+ IL++ + V+EA
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSENINPDVY---TFNILVDAFCKEGRVKEAKNGLA 304
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLG 271
+ G D+ + +L+ C V +A++ + + +++ NI++NG+C +
Sbjct: 305 MMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIK 364
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
V +A + +K++ + P+ +TY + ++ L K G++ AL L M ++G++PD++T +
Sbjct: 365 MVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYS 424
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
I+DALC + +A+ +L ++K++G PN+ TY LI LCK R+E +++ K
Sbjct: 425 SILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVK 484
Query: 392 NGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
+ N T+ +++ +E +L +M+ N C TY +I+ + D D
Sbjct: 485 GYNLTVN--TYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDEND 542
Query: 449 KVRHTWEEMEKKGM 462
K EM +G+
Sbjct: 543 KAEKLLREMITRGL 556
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 175/418 (41%), Gaps = 43/418 (10%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
S F+ DV+ F L++ PD+ +G +L + + +F + +
Sbjct: 42 STTFHNNNDVVDAVSLFNCLLRQNPTPPDM----EFGQILGSLVKSKHYHTVLSLFQKME 97
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
G + F L+ C+ + A + ++ + GY D T+N + G+C+ G +
Sbjct: 98 YRGIKPNFVNFNILINCFCQLGLIPFAFSVL-AKILKMGYEPDTITLNTFIKGFCLKGQI 156
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
++A F ++ D V+Y T +N L K G+ AL L + + K + DVV + I
Sbjct: 157 HQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTI 216
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM----- 388
ID++C K + +A ++ EM +R N+ TY++LI C + +++ ++M
Sbjct: 217 IDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENI 276
Query: 389 ---------------------EQKNGSCL-------PNEITFNYLLKSLKKPEEVPW--- 417
E KNG + P+ +T+N L+ EV
Sbjct: 277 NPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKS 336
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+L M G + +YN+++ + D+ ++EM K + P+ +Y +I GL
Sbjct: 337 ILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLC 396
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
GR+ AL M +G P+ T + D K + +IKL G++ N
Sbjct: 397 KSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPN 454
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 144/349 (41%), Gaps = 28/349 (8%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N +++ + + + +++F EM N TY L++ + + A+ + D
Sbjct: 353 YNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMH 412
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVY 274
+ G+ D+ + ++L LC+ V+ A K++ ++ T I+++G C G +
Sbjct: 413 DRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLE 472
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A+ ++D++ TY + G AL L M + PD +T II
Sbjct: 473 DARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIII 532
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+L K +A ++LREM RG L + Y S + M +L+
Sbjct: 533 CSLFDKDENDKAEKLLREMITRGLLYSFLEYGSW-----SLSFMAAPAHFLN-------- 579
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N L+ E W +ER C N+ K + +C + ++
Sbjct: 580 --------NDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDK---DVECPSVIIYST 628
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ K+G D +YTVMI G G +++L+ +M + G +P+ T
Sbjct: 629 CDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVT 677
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 137/267 (51%), Gaps = 8/267 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
DI T N+++NG C G V +A F K++ CEP++V+Y + L + A L
Sbjct: 26 DIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELM 85
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M +KG P+VVT N +I LC K + ALEVL ++ GC PN +YN L+ CK
Sbjct: 86 GEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQ 145
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTD 432
K+M+ +LD M + C P+ +++N LL +L + EV +E +++ GC
Sbjct: 146 KKMDKAMAFLDLMVSR--GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI 203
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+YN ++ + EM KG+ PD +Y+ + GL + R+EDA+ F ++
Sbjct: 204 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 263
Query: 493 RLKGMVPEPRTGILVNDMNIKLKERGE 519
+ G+ P +L N + + L +R E
Sbjct: 264 QDMGIRPNT---VLYNAIILGLCKRRE 287
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 116/229 (50%), Gaps = 5/229 (2%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + ++ C PD VTY VN + ++G++ A+ + + G +P+ V+ N ++
Sbjct: 10 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 69
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
LC +R +A E++ EM +GC PNV T+N LI LC+ +E E L+++ +
Sbjct: 70 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY--G 127
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
C PN +++N LL + KK ++ L+ M GC +YN +L D
Sbjct: 128 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 187
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+++ KG P SY +I GL G+ ++AL +EM KG+ P+
Sbjct: 188 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 236
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 169/342 (49%), Gaps = 25/342 (7%)
Query: 172 FVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+ + +++ DEM PD+V TY +++N V++AI +G + +
Sbjct: 8 YKQAMKLLDEMRDKGCTPDIV---TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 64
Query: 226 FQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ +L LC + E AE E + ++ T N++++ C G V A + I
Sbjct: 65 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 124
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K C P+S++Y ++A K+ K+ A+ M +G PD+V+ N ++ ALC +
Sbjct: 125 KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 184
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
A+E+L ++K++GC P + +YN++I L K + + E L+EM K P+ IT++
Sbjct: 185 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQ--PDIITYST 242
Query: 405 LLKSL---KKPEEVPWVLERMERNGCKMSTDTYN-VILKLYVNWDCEDKVRHT----WEE 456
+ L + E+ +++ G + +T YN +IL L C+ + H+ +
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL-----CKRRETHSAIDLFAY 297
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
M G P++ +YT++I GL +G +++A E+ +G+V
Sbjct: 298 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 339
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 5/202 (2%)
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A K+ A++L M +KG PD+VT N +++ +C + R+ +A+E L+ + + GC P
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPW 417
N +YN ++K LC +R E E + EM QK C PN +TFN L+ L + E
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQK--GCPPNVVTFNMLISFLCRKGLVEPALE 118
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
VLE++ + GC ++ +YN +L + DK + M +G PD SY ++ L
Sbjct: 119 VLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALC 178
Query: 478 DKGRLEDALSYFHEMRLKGMVP 499
G ++ A+ H+++ KG P
Sbjct: 179 RSGEVDVAVELLHQLKDKGCAP 200
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 5/257 (1%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
WE A + ++G P FN ++ L R ++V +++P N +Y
Sbjct: 78 WEDAEELMGEMGQKG-CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 136
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
LL+ + +++A+ D G D+ ++ LL LCR V+VA K++
Sbjct: 137 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 196
Query: 253 FGYDIK-TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ + N +++G G EA +++ +PD +TY+T L ++ ++ A
Sbjct: 197 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 256
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+R F + + G +P+ V N II LC ++ A+++ M GC+PN +TY LI+
Sbjct: 257 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 316
Query: 372 LCKIKRMETVYEYLDEM 388
L ++ + LDE+
Sbjct: 317 LAYEGLIKEARDLLDEL 333
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 161/375 (42%), Gaps = 43/375 (11%)
Query: 132 YRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTY 191
+R D +AA R D + N ++ L R R + +V + TY
Sbjct: 76 HRGDLDAALRLVGSSPRPPDVP----LANRLVRDLCRRGRPADAARVVEACGPEATAATY 131
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
G L++ Y A ++E+A R+ G + HV+ + +
Sbjct: 132 GALVDGYCRAGLLEDA------RRVVGGMP---------------AHVQASSAYAH---- 166
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
N +++ C G V +A ++ C PD VTY + A K A
Sbjct: 167 ---------NPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQA 217
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L L M +G +P+ VT N IIDA+C + + +A E+L + +RGC PN YN+++K
Sbjct: 218 LELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 277
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCK 428
C I+R E LDEM ++N C PNE T N ++ +L + ++V LE+M ++GC
Sbjct: 278 FCSIERWVDADEILDEMVREN--CPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCT 335
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+ TYN ++ D M+ G PD +Y ++ GL R EDA
Sbjct: 336 ANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEEL 395
Query: 489 FHEMRLKGMVPEPRT 503
+M +P+ T
Sbjct: 396 MIKMSQNDRLPDNST 410
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 156/357 (43%), Gaps = 11/357 (3%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYG 192
+ A ++ EG P + +N I+D + R + ++ + +P N Y
Sbjct: 214 YRQALELIDFMRAEG-CEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYN 272
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKN 251
+L + + +A + D + + ++ LCR ++ + E K+
Sbjct: 273 TVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKH 332
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
++ T N +++G C GNV A ++ C+PD VTY T + L + A
Sbjct: 333 GCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDA 392
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L M + R PD T N II C K I +A EV ++M +GC PN TTY+++I
Sbjct: 393 EELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGG 452
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCK 428
L K +ME E L+EM K + + L +SL K EEV V+ +++ +G
Sbjct: 453 LTKAGKMEQALELLNEMANKG---FNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGIS 509
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
T YN +L D +M G PD+ +Y ++I GL+ +G ++A
Sbjct: 510 PQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEA 566
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 94/253 (37%), Gaps = 51/253 (20%)
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
++AL +G L ALRL + R PDV N ++ LC + R +A V+ C
Sbjct: 71 LSALIHRGDLDAALRL---VGSSPRPPDVPLANRLVRDLCRRGRPADAARVV-----EAC 122
Query: 359 LPNVT-------------------------------------TYNSLIKHLCKIKRMETV 381
P T +N LI LC+ R+
Sbjct: 123 GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADA 182
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER---MERNGCKMSTDTYNVIL 438
LD M + C P+ +T+N LL++ K LE M GC+ + TYNVI+
Sbjct: 183 LVVLDGMLCR--GCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVII 240
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D+ R + +G P+ +Y ++ G R DA EM +
Sbjct: 241 DAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCP 300
Query: 499 P-EPRTGILVNDM 510
P E +++N +
Sbjct: 301 PNEATLNVIINTL 313
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 16/225 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVF------DEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P +N +L L A R+ + ++ D +PD T+ +++ + ++ +A
Sbjct: 371 PDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPD---NSTFNTIISFWCQKGLILQA 427
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNG 266
VF + E G + + + ++ L + +E A E E F D K ++
Sbjct: 428 FEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD-KMYRVLTES 486
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ E + + S P +V Y T + L + GK A+ + M G PD
Sbjct: 487 LNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPD 546
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
T +I+ L ++ EA E+L + +R L NSLIK+
Sbjct: 547 ESTYIILIEGLFYEGYSKEARELLSRLCSRDVL-----SNSLIKN 586
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 175/396 (44%), Gaps = 30/396 (7%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE------------------ 174
R D + A FFKW + + + + I+ ++ RAR + +
Sbjct: 81 REDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGF 140
Query: 175 -LIQVFDEMPDLVN-----EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
+ +FD + N + +L + + ++EEA F R + F L +
Sbjct: 141 PVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNF 200
Query: 229 LLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
LL L + + ++ FF + T N++++ C G++ ++R + + +
Sbjct: 201 LLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMG 260
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
PD VTY + ++ K G L LF M + G PD++T N +I+ C +++P A
Sbjct: 261 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAF 320
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
E EMKN G PNV TY++LI CK M+ + L +M + LPNE T+ L+
Sbjct: 321 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRT--GLLPNEFTYTSLID 378
Query: 408 SLKKPEEV--PW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
+ K + W +L M + G K++ TY +L + + M K G+ P
Sbjct: 379 ANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP 438
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+Q+ YT ++HG R+EDA+ +M + P+
Sbjct: 439 NQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPD 474
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 168/357 (47%), Gaps = 15/357 (4%)
Query: 153 SPGSNVFNAILDVLGR------ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
+P +N ++D L + +RR ++ PD+V TY L++ Y +EE
Sbjct: 227 APSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVV---TYNSLIDGYGKVGSLEE 283
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
+F+ K+ G + D+ + L+ C+++ + A E F E + N ++ T + +++
Sbjct: 284 VASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLID 343
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+C G + A + D+ ++ P+ TY + ++A K G L A +L M + G K
Sbjct: 344 AFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKL 403
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
++VT ++D LC R+ EA EV R M G PN Y +L+ K +RME + L
Sbjct: 404 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 463
Query: 386 DEMEQKNGSCLPNEITFNYLL---KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+M + N P+ I + ++ S +K EE +LE M+ G + I+ Y
Sbjct: 464 KQMTECNIK--PDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 521
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ ++EM+ G+ +Y V+I GL + G +E A+ YF M G+ P
Sbjct: 522 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQP 578
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 165/377 (43%), Gaps = 12/377 (3%)
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAA 201
W +R S GS VF+ + V E + F M + L ++ LL+R + +
Sbjct: 150 WSTRNICVS-GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKS 208
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKT 259
+ F+ G + + ++ +LC+ +E + F + E G D+ T
Sbjct: 209 GNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLF-VQMREMGLSPDVVT 267
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N +++G+ +G++ E + ++ C PD +TY +N K K+ A F M
Sbjct: 268 YNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMK 327
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
G KP+VVT + +IDA C + + A+++L +M+ G LPN TY SLI CK +
Sbjct: 328 NNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLT 387
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNV 436
++ L++M Q N +T+ LL L K E V M ++G + Y
Sbjct: 388 EAWKLLNDMLQAGVKL--NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTA 445
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ Y+ + + ++M + + PD Y +I G + +LE+ EM+ +G
Sbjct: 446 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 505
Query: 497 MVPEPRTGILVNDMNIK 513
+ P + D K
Sbjct: 506 ISANPVISTTIIDAYFK 522
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 158/390 (40%), Gaps = 50/390 (12%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
RE SP +N+++D G+ E+ +F+EM PD++ TY L+N Y
Sbjct: 257 REMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII---TYNGLINCYCKF 313
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK------NEFGY 255
+ A F K G ++ + L+ C+ ++ A + NEF Y
Sbjct: 314 EKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTY 373
Query: 256 ------------------------------DIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
+I T +L+G C G + EA+ ++ ++K
Sbjct: 374 TSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLK 433
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
P+ Y V+ K ++ A+++ + M E KPD++ II C ++++ E
Sbjct: 434 DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEE 493
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
+L EMK+RG N ++I K + + EM+ +T+ L
Sbjct: 494 TKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE--ATIVTYCVL 551
Query: 406 LKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ L + V ++ RM G + + Y ++ +C + + ++EM+ +GM
Sbjct: 552 IDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGM 611
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
PD ++T +I G G L++AL M
Sbjct: 612 TPDITAFTALIDGNLKHGNLQEALVLISRM 641
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM-PDLV--NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+ A+LD L +A R +E +VF M D + N++ Y L++ Y A +E+A+ + +
Sbjct: 408 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 467
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
E DL + +++ C + +E E
Sbjct: 468 ECNIKPDLILYGSIIWGHCSQRKLE----------------------------------E 493
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
K +++ + V T ++A K GK AL FQ M + G + +VT +ID
Sbjct: 494 TKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLID 553
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
LC + A++ M + G PNV Y SLI LC +E+ + DEM+ + +
Sbjct: 554 GLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMT- 612
Query: 396 LPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+ F L+ K +E ++ RM + Y ++ + + R
Sbjct: 613 -PDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARK 671
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ EM +KG+ P++ ++ Y +G+L++A+ +EM
Sbjct: 672 FFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 5/254 (1%)
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
++ C S + + + G L A F M P +CN ++ L
Sbjct: 153 RNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQ 212
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+ +M G P+V TYN +I +LCK +E +M + S P+ +T+N
Sbjct: 213 LVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLS--PDVVTYNS 270
Query: 405 LLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ K EEV + M+ GC TYN ++ Y ++ + + EM+ G
Sbjct: 271 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 330
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQG 521
+ P+ +Y+ +I +G ++ A+ +MR G++P T + D N K E
Sbjct: 331 LKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 390
Query: 522 KKVIKLTSLGLKGN 535
K + + G+K N
Sbjct: 391 KLLNDMLQAGVKLN 404
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 12/323 (3%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCRYKHVEVA-- 242
VNE LLN A V+EA+ + RR EFG + ++ + LL LC K VE A
Sbjct: 123 VNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALE 182
Query: 243 --ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
T E ++ T N I++G C V A+ + +I + D VTY+T ++
Sbjct: 183 LLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIID 242
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K + A + Q M +KG KPDVVT N IID LC + + A VL+ M ++G P
Sbjct: 243 GLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 302
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPW 417
+V TYN++I LCK + ++ L M K+ P+ T+N L+ S + +EV
Sbjct: 303 DVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVK--PDIQTYNCLIHGYLSTGEWKEVVR 360
Query: 418 VLERMERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
LE M G TY+++L L N C + R + M +KG+ P+ Y +++HG
Sbjct: 361 RLEEMYARGLDPDVVTYSLLLDYLCKNGKCTE-ARKIFYCMIRKGIKPNVTIYGILLHGY 419
Query: 477 YDKGRLEDALSYFHEMRLKGMVP 499
+G + D M G+ P
Sbjct: 420 AARGAIADLTDLLDLMVANGISP 442
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 175/375 (46%), Gaps = 16/375 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F + R+G P ++ +L +L + D M P N +
Sbjct: 393 ARKIFYCMIRKG-IKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISP---NNYIFN 448
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
I+L YA M++EA+ +F R + G D+ + L+ LC+ V+ A F N+
Sbjct: 449 IVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIND 508
Query: 253 -FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ N ++ G C + +A+ + ++ P+ V + T + L +G++ A
Sbjct: 509 GVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVA 568
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
RL +M G +P+V++ N +I C R EA ++L M + G P++ +Y++L++
Sbjct: 569 QRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRG 628
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
CK R++ Y EM +K + P +T++ +L+ L ++ E + M ++G +
Sbjct: 629 YCKTGRIDNAYCLFREMLRKGVT--PGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQ 686
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TYN+IL +C D+ ++ + K + P+ ++T+MI L+ GR +DA+
Sbjct: 687 WDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDL 746
Query: 489 FHEMRLKGMVPEPRT 503
F + G+VP T
Sbjct: 747 FASIPSHGLVPNVVT 761
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 162/360 (45%), Gaps = 15/360 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N I+D L +A+ V M PD+ +TY L++ Y + +E
Sbjct: 302 PDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDI---QTYNCLIHGYLSTGEWKEV 358
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNG 266
+ + G D+ + LL +LC+ K E + F+ + ++ I+L+G
Sbjct: 359 VRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHG 418
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ G + + ++ + P++ + + A KK + A+ +F M + G PD
Sbjct: 419 YAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPD 478
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT +IDALC R+ +A+ +M N G PN +NSL+ LC + R E E
Sbjct: 479 VVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFF 538
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLYVN 443
EM + PN + FN ++ +L +V +++ MER G + + +YN ++ +
Sbjct: 539 EMWDQ--GVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCL 596
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ + M G+ PD SY ++ G GR+++A F EM KG+ P T
Sbjct: 597 AGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVT 656
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 165/379 (43%), Gaps = 47/379 (12%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK---HVEVAETFF----ESEKNEFGYD 256
+++A+ +FD + AF +LL + R + E+A + F + N+ D
Sbjct: 30 IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR-LF 315
+ T +I+ +C LG + + I+K+ + V +N L ++ A+ L
Sbjct: 90 LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG---CLPNVTTYNSLIKHL 372
+ M E G P+VV+CN ++ LC +KR+ EALE+L M G C PNV TYN++I L
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209
Query: 373 CK---IKRMETVYEYLDEMEQK----------NGSCL--------------------PNE 399
CK + R E V +++ + K +G C P+
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269
Query: 400 ITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
+T+N ++ L K + V VL+ M G K TYN I+ D+ +
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKE 516
M K + PD ++Y +IHG G ++ + EM +G+ P+ T L+ D K +
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389
Query: 517 RGEQGKKVIKLTSLGLKGN 535
E K + G+K N
Sbjct: 390 CTEARKIFYCMIRKGIKPN 408
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 167/392 (42%), Gaps = 15/392 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++ +LD L + + E ++F M P N YGILL+ YAA + +
Sbjct: 372 PDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKP---NVTIYGILLHGYAARGAIADL 428
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNG 266
+ D G + F +L + + E F ++ D+ T I+++
Sbjct: 429 TDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDA 488
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C LG V +A + +I P+SV + + V L + A LF MW++G +P+
Sbjct: 489 LCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPN 548
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VV N I+ LC + ++ A ++ M+ G PNV +YN+LI C R + + LD
Sbjct: 549 VVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLD 608
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVN 443
M P+ I+++ LL+ K + + M R G TY+ IL+ +
Sbjct: 609 VMVSVGLK--PDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFH 666
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + + M K G D +Y ++++GL +++A F + K + P T
Sbjct: 667 TRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIIT 726
Query: 504 GILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
++ D+ K + + + S GL N
Sbjct: 727 FTIMIDVLFKGGRKKDAMDLFASIPSHGLVPN 758
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 161/385 (41%), Gaps = 50/385 (12%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + +FN +L + E + +F M PD+V TYGIL++ V++
Sbjct: 441 SPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVV---TYGILIDALCKLGRVDD 497
Query: 207 AIGVFDRRKEFGELDDLSAFQNLL------------------LW---------------- 232
A+ F++ G + F +L+ +W
Sbjct: 498 AVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMC 557
Query: 233 -LCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
LC V VA+ +S E+ ++ + N ++ G C+ G EA + ++ +P
Sbjct: 558 NLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKP 617
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D ++Y T + K G++ A LF+ M KG P VT + I+ L +R EA E+
Sbjct: 618 DLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELY 677
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
M G ++ TYN ++ LCK ++ ++ + K+ PN ITF ++ L
Sbjct: 678 LNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLR--PNIITFTIMIDVLF 735
Query: 411 K---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
K ++ + + +G + TY +++K + D+ + + MEK G PD
Sbjct: 736 KGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSV 795
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEM 492
+I L +G + A +Y ++
Sbjct: 796 MLNAIIRSLLGRGEIMRAGAYLSKI 820
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 115/273 (42%), Gaps = 23/273 (8%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N ++ A R E Q+ D M PDL+ +Y LL Y ++ A
Sbjct: 582 PNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLI---SYDTLLRGYCKTGRIDNA 638
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNG 266
+F G + +L L + E E + K+ +DI T NIILNG
Sbjct: 639 YCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNG 698
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C V EA + ++ + P+ +T+ ++ L K G+ A+ LF ++ G P+
Sbjct: 699 LCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPN 758
Query: 327 VVTCNCIIDALCFKKRIPEAL-----EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
VVT CI+ K I E L + M+ GC P+ N++I+ L +
Sbjct: 759 VVT-YCIM----MKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRA 813
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
YL ++++ N S E + LL SL EE
Sbjct: 814 GAYLSKIDEMNFSL---EASTTSLLISLFSREE 843
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 182/424 (42%), Gaps = 77/424 (18%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----------PDLVNEKTYGILLNR 197
R+ +P FNA + L +A R ++ ++F++M PD V T+ ++L+
Sbjct: 239 RDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQV---TFDVMLSG 295
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKN 251
+ A MV+EA + D + G L + ++ L L R V A+ + N
Sbjct: 296 FCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPN 355
Query: 252 EFGY------------------------------DIKTMNIILNGWCVLGNVYEAKRFWK 281
+ Y D+ T +L+ +C GN A R
Sbjct: 356 SYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILD 415
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
++ + C P+S TY + +L K G++ A RL + M EKG D +CN IID LC
Sbjct: 416 EMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNN 475
Query: 342 RIPEALEVLREMKNRG-----------------------CLPNVTTYNSLIKHLCKIKRM 378
++ A++++ M N G CLP+ TY++L+ LCK R
Sbjct: 476 KLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRF 535
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYN 435
+ + L EM K+ S P+ + ++ + K + VL ME+ GCK ST TYN
Sbjct: 536 DEAKKKLLEMIGKDIS--PDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYN 593
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+++ + D++ EM+ KG+ P+ +Y +I ++G + A+ EM
Sbjct: 594 LLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQN 653
Query: 496 GMVP 499
+VP
Sbjct: 654 EIVP 657
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 172/423 (40%), Gaps = 86/423 (20%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP 183
L++ + RFD + +K + G +P N +L L A R +VFD MP
Sbjct: 121 LLLAALQEARFDL--VESLYKDLLLSG-AAPDVFTRNILLQALCAAGRMELARRVFDAMP 177
Query: 184 DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE 243
+ NE ++GIL Y A +A+GV D + + L +C
Sbjct: 178 ER-NEFSFGILARGYCRAGRSMDALGVLD------------SMPTMNLVVC--------- 215
Query: 244 TFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
N ++ G+C G V EA+R + + P+ VT+ ++AL
Sbjct: 216 -----------------NTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALC 258
Query: 304 KKGKLGTALRLFQAM---WEKG-RKPDVVTCNCIIDALC-------------------FK 340
K G++ A R+F M WE+G +PD VT + ++ C F
Sbjct: 259 KAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFL 318
Query: 341 KRIP----------------EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
+R+ EA E+LREM + G PN TYN ++ LCK + V +
Sbjct: 319 RRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKV 378
Query: 385 LDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
D + K+G P+ +T+ LL S +L+ M + GC ++ TYNV+L+
Sbjct: 379 EDFV--KSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSL 436
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ E M +KG D S ++I GL +L+ A+ M +G +
Sbjct: 437 WKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALG 496
Query: 502 RTG 504
R G
Sbjct: 497 RLG 499
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 127/294 (43%), Gaps = 29/294 (9%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
+ G +P + ++L ++ DEM N TY +LL A +
Sbjct: 383 KSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRI 442
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-------FGY-- 255
EA + +R E G D ++ ++ LCR +++A + NE GY
Sbjct: 443 TEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSF 502
Query: 256 ---------------DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
D T + +++ C G EAK+ ++I PDSV Y TF++
Sbjct: 503 LSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIH 562
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
K GK A+++ + M +KG KP T N +I K E L+++ EMK +G P
Sbjct: 563 GYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICP 622
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
NV TYNSLIK C+ + LDEM Q +PN +F L+K+ K +
Sbjct: 623 NVMTYNSLIKSFCERGMVNKAMPLLDEMLQNE--IVPNITSFELLIKAFCKTSD 674
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 176/380 (46%), Gaps = 26/380 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY F + ++G P FN ++ VL + E ++F ++ P+L T+
Sbjct: 200 AYHLFDEMLKQG-ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLF---TFN 255
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES---- 248
I + ++EA + + G D+ ++ L+ C++ + AE +
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315
Query: 249 --EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
E NEF Y N I+NG+C G + A + +D + PD TY++ +N L G
Sbjct: 316 GVEPNEFTY-----NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDG 370
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ A+ +F EKG K ++ N ++ L + + +AL+++++M GC P++ TYN
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERME 423
++ LCK+ + L++ K C+P+ TFN L+ K ++ +L+ M
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAK--GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+G TYN +L D V T++ M +KG P+ +Y ++I ++
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548
Query: 484 DALSYFHEMRLKGMVPEPRT 503
+A+ F EM+ +G+ P+ T
Sbjct: 549 EAMELFKEMKTRGLTPDIVT 568
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 179/401 (44%), Gaps = 13/401 (3%)
Query: 126 VNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL 185
V + RY+ D A F V E + + +++ LG +F + V EM
Sbjct: 10 VAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKN 69
Query: 186 VNEK----TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
V+ K Y ++ Y V+EA+ VF+R + + ++ ++ L Y +
Sbjct: 70 VDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQ 129
Query: 242 AETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A + K+ Y D+ T I + +C+ G A R ++ CE ++V+Y ++
Sbjct: 130 AHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVIS 189
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
K+ A LF M ++G PD++T N +I LC K + E+ ++ ++ RG P
Sbjct: 190 GFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCP 249
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPW 417
N+ T+N I+ LC+ ++ L+ + + + P+ I++N L+ K E
Sbjct: 250 NLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT--PDVISYNTLICGFCKHSKLVEAEC 307
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
L +M +G + + TYN I+ + + KG PD+ +Y+ +I+GL
Sbjct: 308 YLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLC 367
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG 518
+ G + A++ F+E KG + IL N + L ++G
Sbjct: 368 NDGDMNRAMAVFYEAMEKGF---KHSIILYNTLVKGLSKQG 405
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 164/364 (45%), Gaps = 23/364 (6%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL----------VNEKTYGILLNRYAA 200
D P +NAI+++L F + +V+ M D+ + K++ I AA
Sbjct: 106 DCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAA 165
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM 260
++ G + EF + + C+ +E F E K DI T
Sbjct: 166 LRLLNNMPG---QGCEFNAVSYCAVISGFYKENCQ---IEAYHLFDEMLKQGICPDILTF 219
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N +++ C GNV E+++ + ++K P+ T+ F+ L +KG + A RL +++
Sbjct: 220 NKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVS 279
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G PDV++ N +I C ++ EA L +M N G PN TYN++I CK M+
Sbjct: 280 EGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQN 339
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL----ERMERNGCKMSTDTYNV 436
+ L + K +P+E T++ L+ L ++ + E ME+ G K S YN
Sbjct: 340 ADKILRDAMFK--GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK-GFKHSIILYNT 396
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++K + ++M + G PD +Y ++++GL G L DA ++ KG
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG 456
Query: 497 MVPE 500
+P+
Sbjct: 457 CIPD 460
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 185/423 (43%), Gaps = 37/423 (8%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVIN---------RYRFDWEAAYTFFKWVSREGDYSPGS 156
KG I++A E +++ L +VI+ ++ EA K V+ P
Sbjct: 264 KGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVN--SGVEPNE 321
Query: 157 NVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
+N I++ +A ++ + +PD E TY L+N + A+ V
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPD---EFTYSSLINGLCNDGDMNRAMAV 378
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCV 269
F E G + + L+ L + V + + + ++ DI T N+++NG C
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+G + +A D I C PD T+ T ++ K+ + A+ + M G PDV+T
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVIT 498
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +++ LC +++ ++ + M +GC PN+ TYN LI+ CK +++ E EM+
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMK 558
Query: 390 QKNGSCLPNEITFNYLL------KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLY-- 441
+ + P+ +T L+ L K E+ +E+ + ST +N+++ +
Sbjct: 559 TRGLT--PDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS--YSTAIFNIMINAFCE 614
Query: 442 -VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+N +K+ H +M PD +Y VMI G ++ A ++ E KG+VP
Sbjct: 615 KLNVSMAEKLFH---KMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671
Query: 501 PRT 503
T
Sbjct: 672 FTT 674
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 145/323 (44%), Gaps = 5/323 (1%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y L+ + +V +A+ + E G D+ + ++ LC+ + A
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453
Query: 251 NEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ DI T N +++G+C N+ +A ++ PD +TY T +N L K KL
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLD 513
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+ F+AM EKG P+++T N +I++ C +++ EA+E+ +EMK RG P++ T +LI
Sbjct: 514 NVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNG 426
LC ++ YE +E++ I FN ++ + + V + +M +
Sbjct: 574 CGLCSNGELDKAYELFVTIEKEYKFSYSTAI-FNIMINAFCEKLNVSMAEKLFHKMGGSD 632
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
C TY V++ Y D E KG+ P + +++ L RL +A+
Sbjct: 633 CAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAV 692
Query: 487 SYFHEMRLKGMVPEPRTGILVND 509
+ M G+VPE I D
Sbjct: 693 VIINLMVQNGIVPEEVNSIFEAD 715
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 11/216 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P +N +L+ L +AR+ ++ F M P+++ TY IL+ + V E
Sbjct: 493 TPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII---TYNILIESFCKDRKVSE 549
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN-EFGYDIKTMNIIL 264
A+ +F K G D+ L+ LC ++ A E F EK +F Y NI++
Sbjct: 550 AMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMI 609
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N +C NV A++ + + S C PD+ TY +++ K G + A KG
Sbjct: 610 NAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLV 669
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
P TC +++ LC R+ EA+ ++ M G +P
Sbjct: 670 PSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 15/274 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P FN ++D + R + I++ D M PD++ TY LLN A ++
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI---TYNTLLNGLCKARKLDNV 515
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNG 266
+ F E G ++ + L+ C+ + V E E F E + DI T+ ++ G
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575
Query: 267 WCVLGNVYEAKRFWKDIIKS-KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G + +A + I K K + + +NA +K + A +LF M P
Sbjct: 576 LCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAP 635
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D T +ID+ C I A L E ++G +P+ TT ++ LC R+ +
Sbjct: 636 DNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVII 695
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
+ M Q NG +P E+ N + ++ KK P ++
Sbjct: 696 NLMVQ-NG-IVPEEV--NSIFEADKKEVAAPKIV 725
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 164/350 (46%), Gaps = 32/350 (9%)
Query: 169 ARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
AR+ + +++F E+ + N TY +L+ + + +A+ VF K G L + S
Sbjct: 3 ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62
Query: 226 FQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
LLL LC + A F E + F + NI+L G+ + G E F+K++
Sbjct: 63 MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIE---FFKEMK 119
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
S EPD +Y ++AL+ G++ A LF AM PD++T N ++D C +
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTY 176
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA +++E+ G PNV TY+ +I CK+ ++E +E +M + N C+PN +TFN
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESN--CVPNAVTFNT 234
Query: 405 LLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK--------LYVNWDCEDKVRHT 453
L+ K E+ + ME+ GCK + TYN ++ +Y D
Sbjct: 235 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVD-------L 287
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ ++E G+ P +Y +I G + R D L M +G P+ T
Sbjct: 288 FNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVIT 335
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 164/358 (45%), Gaps = 23/358 (6%)
Query: 127 NVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---P 183
N++ R F A FFK + G P ++ +L L + R E +F M P
Sbjct: 99 NILLRGFFMAGRAIEFFKEMKASG-VEPDLESYHILLSALSDSGRMAEAHALFSAMTCSP 157
Query: 184 DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA- 242
D++ TY +L++ Y EA + + G ++ + ++ C+ VE A
Sbjct: 158 DIM---TYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAW 214
Query: 243 ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
E F + ++ + T N ++ G+C G + +A + + ++ K C+ VTY T +++L
Sbjct: 215 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSL 274
Query: 303 TKK-GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
KK G + TA+ LF + G P +VT N +I F +R + L +L M GC P+
Sbjct: 275 CKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQG--FSERANDGLRLLCHMHAEGCKPD 332
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V TYN LI LC R+E + M +C PN TFN+L++ L KK EE +
Sbjct: 333 VITYNCLISGLCSANRVEDAQRLFNGM-----ACAPNVTTFNFLIRGLCAQKKVEEARNI 387
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
L+RM T+N I+ + R ++M K G P+ + + HG+
Sbjct: 388 LDRMTAP----DMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 161/350 (46%), Gaps = 15/350 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P ++ N +L L + +++F EM P L ++ ILL + M AI
Sbjct: 58 PNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGF---FMAGRAIEF 114
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
F K G DL ++ LL L + A F + DI T N++++G+C +
Sbjct: 115 FKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS--PDIMTYNVLMDGYCKI 172
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G YEA+ K+I+K+ EP+ TY+ +N K K+ A +F M E P+ VT
Sbjct: 173 GQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTF 232
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +I C + +A+++ EM+ GC + TYN+LI LC K+ VY +D +
Sbjct: 233 NTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLC--KKRGGVYTAVDLFNK 290
Query: 391 KNGSCL-PNEITFNYLLKSL-KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
G+ L P +T+N L++ ++ + +L M GCK TYN ++ + + +
Sbjct: 291 LEGAGLTPTIVTYNSLIQGFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVE 350
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ + M P+ ++ +I GL + ++E+A + M M
Sbjct: 351 DAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTAPDMT 397
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 6/199 (3%)
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
ALRLF+ + P+ T N +I C ++ +A+ V +MK+ G LPN +T N+L+
Sbjct: 9 ALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLL 68
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMS 430
LC+I +M + + EM+ G LP + N LL+ + M+ +G +
Sbjct: 69 GLCEIGQMSSALKLFREMQA--GPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVEPD 126
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
++Y+++L + + + M PD +Y V++ G G+ +A S
Sbjct: 127 LESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMK 183
Query: 491 EMRLKGMVPEPRT-GILVN 508
E+ G P T I++N
Sbjct: 184 EILKAGYEPNVFTYSIIIN 202
>gi|222622668|gb|EEE56800.1| hypothetical protein OsJ_06387 [Oryza sativa Japonica Group]
Length = 540
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 182/417 (43%), Gaps = 39/417 (9%)
Query: 106 KGEIEKALNQCEL----TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNA 161
+ + +AL+ + L+ +++ V++ F A FF W P + N
Sbjct: 86 RAALHRALSSTGIDAAAALSPEVLSGVVSHGNFSGAATVDFFDWAIANSKLPPSVDTCNI 145
Query: 162 ILDVLGRARRF------VELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFD--- 212
++ LGR + F +E+++ PD+ T I+++ AA V AI + +
Sbjct: 146 VIRALGRRKFFAFFEPALEIMRKNGVSPDI---STLEIIIDSLIAARHVNTAIQLINTDH 202
Query: 213 ---------RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNI 262
+RKE F L+ LCR HV +A + ++ + E D N
Sbjct: 203 FGLGVWQTCQRKEI--------FTVLINCLCRRSHVGLASSLLQASRGETIDLDNHMYNE 254
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ GW G V + + FW+ +++ PD V+Y + AL + + AL++F+ M +G
Sbjct: 255 VIGGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMVHEG 314
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P + N +I ++ ++M + C PN+ TY +I+ + +++
Sbjct: 315 YCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNIDTYRKMIRAFLRERKVADAL 374
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK 439
+ DEM + LP+ ++ L P + +R + GC++S Y ++L+
Sbjct: 375 QMFDEMLSRG--ILPSTGMITLFIEPLCTFGPPHAALLIYKRSRKAGCRISMKAYKLLLE 432
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ V WEEM++ G D+ Y +++GL + G+++ A+S E KG
Sbjct: 433 RLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAAVSVVEESIRKG 489
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 7/181 (3%)
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P V TCN +I AL +K L M+ G P+++T +I L + + T +
Sbjct: 138 PSVDTCNIVIRALGRRKFFAFFEPALEIMRKNGVSPDISTLEIIIDSLIAARHVNTAIQL 197
Query: 385 LDEMEQKNG---SCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVIL 438
++ G +C EI F L+ L + V +L+ + YN ++
Sbjct: 198 INTDHFGLGVWQTCQRKEI-FTVLINCLCRRSHVGLASSLLQASRGETIDLDNHMYNEVI 256
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ + DKV H WE M + G+ PDQ SY +I L R E+AL F +M +G
Sbjct: 257 GGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMVHEGYC 316
Query: 499 P 499
P
Sbjct: 317 P 317
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 109/231 (47%), Gaps = 15/231 (6%)
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQ------AMWEKGRKPDVVTCNCIIDALC 338
K+ PD T +++L + TA++L +W+ ++ ++ T +I+ LC
Sbjct: 168 KNGVSPDISTLEIIIDSLIAARHVNTAIQLINTDHFGLGVWQTCQRKEIFTV--LINCLC 225
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
+ + A +L+ + + YN +I + R++ V + + M + +P+
Sbjct: 226 RRSHVGLASSLLQASRGETIDLDNHMYNEVIGGWARFGRVDKVEHFWETMLEDG--LVPD 283
Query: 399 EITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
++++ +L+++L + EE V E+M G +T YN ++ +++ D+ ++
Sbjct: 284 QVSYCHLIEALGRANRAEEALQVFEKMVHEGYCPTTMAYNALIFNFISVGNFDRCIKYYK 343
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGIL 506
+M P+ +Y MI + ++ DAL F EM +G++P TG++
Sbjct: 344 DMLDNNCPPNIDTYRKMIRAFLRERKVADALQMFDEMLSRGILPS--TGMI 392
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 14/243 (5%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAI 208
E P + +++ LGRA R E +QVF++M V+E Y Y A ++
Sbjct: 277 EDGLVPDQVSYCHLIEALGRANRAEEALQVFEKM---VHEG-YCPTTMAYNALIFNFISV 332
Query: 209 GVFDR-RKEFGELDD------LSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTM 260
G FDR K + ++ D + ++ ++ R + V A + F E +
Sbjct: 333 GNFDRCIKYYKDMLDNNCPPNIDTYRKMIRAFLRERKVADALQMFDEMLSRGILPSTGMI 392
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+ + C G + A +K K+ C Y + L GK GT L++++ M E
Sbjct: 393 TLFIEPLCTFGPPHAALLIYKRSRKAGCRISMKAYKLLLERLAMFGKSGTVLQIWEEMQE 452
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG-CLPNVTTYNSLIKHLCKIKRME 379
G D I++ LC ++ A+ V+ E +G CL V Y L L ++ ++E
Sbjct: 453 SGHPSDKEIYEFIVNGLCNVGKVDAAVSVVEESIRKGFCLGRV-VYGKLNNKLLEMNKVE 511
Query: 380 TVY 382
T Y
Sbjct: 512 TAY 514
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 116 CELTLT-DDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE 174
C T+ + LI N I+ FD ++K + + + P + + ++ R R+ +
Sbjct: 316 CPTTMAYNALIFNFISVGNFD--RCIKYYKDM-LDNNCPPNIDTYRKMIRAFLRERKVAD 372
Query: 175 LIQVFDEMPDLVNEKTYGIL------LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
+Q+FDEM + G++ L + H A+ ++ R ++ G + A++
Sbjct: 373 ALQMFDEMLSRGILPSTGMITLFIEPLCTFGPPH---AALLIYKRSRKAGCRISMKAYKL 429
Query: 229 LLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
LL L + K V + + E +++ D + I+NG C +G V A ++ I+
Sbjct: 430 LLERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAAVSVVEESIRKG 489
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQ 316
V Y N L + K+ TA LF+
Sbjct: 490 FCLGRVVYGKLNNKLLEMNKVETAYNLFK 518
>gi|218190552|gb|EEC72979.1| hypothetical protein OsI_06882 [Oryza sativa Indica Group]
Length = 541
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 182/417 (43%), Gaps = 39/417 (9%)
Query: 106 KGEIEKALNQCEL----TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNA 161
+ + +AL+ + L+ +++ V++ F A FF W P + N
Sbjct: 87 RAALHRALSSTGIDAAAALSPEVLSGVVSHGNFSGAATVDFFDWAIANSKLPPSVDTCNI 146
Query: 162 ILDVLGRARRF------VELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFD--- 212
++ LGR + F +E+++ PD+ T I+++ AA V AI + +
Sbjct: 147 VIRALGRRKFFAFFEPALEIMRKNGVSPDI---STLEIIIDSLIAARHVNTAIQLINTDH 203
Query: 213 ---------RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNI 262
+RKE F L+ LCR HV +A + ++ + E D N
Sbjct: 204 FGLGVWQTCQRKEI--------FTVLINCLCRRSHVGLASSLLQASRGETIDLDNHMYNE 255
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ GW G V + + FW+ +++ PD V+Y + AL + + AL++F+ M +G
Sbjct: 256 VIGGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMVHEG 315
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P + N +I ++ ++M + C PN+ TY +I+ + +++
Sbjct: 316 YCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNIDTYRKMIRAFLRERKVADAL 375
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK 439
+ DEM + LP+ ++ L P + +R + GC++S Y ++L+
Sbjct: 376 QMFDEMLSRG--ILPSTGMITLFIEPLCTFGPPHAALLIYKRSRKAGCRISMKAYKLLLE 433
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ V WEEM++ G D+ Y +++GL + G+++ A+S E KG
Sbjct: 434 RLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAAVSVVEESIRKG 490
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 7/181 (3%)
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P V TCN +I AL +K L M+ G P+++T +I L + + T +
Sbjct: 139 PSVDTCNIVIRALGRRKFFAFFEPALEIMRKNGVSPDISTLEIIIDSLIAARHVNTAIQL 198
Query: 385 LDEMEQKNG---SCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVIL 438
++ G +C EI F L+ L + V +L+ + YN ++
Sbjct: 199 INTDHFGLGVWQTCQRKEI-FTVLINCLCRRSHVGLASSLLQASRGETIDLDNHMYNEVI 257
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ + DKV H WE M + G+ PDQ SY +I L R E+AL F +M +G
Sbjct: 258 GGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMVHEGYC 317
Query: 499 P 499
P
Sbjct: 318 P 318
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 109/231 (47%), Gaps = 15/231 (6%)
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQ------AMWEKGRKPDVVTCNCIIDALC 338
K+ PD T +++L + TA++L +W+ ++ ++ T +I+ LC
Sbjct: 169 KNGVSPDISTLEIIIDSLIAARHVNTAIQLINTDHFGLGVWQTCQRKEIFTV--LINCLC 226
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
+ + A +L+ + + YN +I + R++ V + + M + +P+
Sbjct: 227 RRSHVGLASSLLQASRGETIDLDNHMYNEVIGGWARFGRVDKVEHFWETMLEDG--LVPD 284
Query: 399 EITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
++++ +L+++L + EE V E+M G +T YN ++ +++ D+ ++
Sbjct: 285 QVSYCHLIEALGRANRAEEALQVFEKMVHEGYCPTTMAYNALIFNFISVGNFDRCIKYYK 344
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGIL 506
+M P+ +Y MI + ++ DAL F EM +G++P TG++
Sbjct: 345 DMLDNNCPPNIDTYRKMIRAFLRERKVADALQMFDEMLSRGILPS--TGMI 393
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 14/243 (5%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAI 208
E P + +++ LGRA R E +QVF++M V+E Y Y A ++
Sbjct: 278 EDGLVPDQVSYCHLIEALGRANRAEEALQVFEKM---VHEG-YCPTTMAYNALIFNFISV 333
Query: 209 GVFDR-RKEFGELDD------LSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTM 260
G FDR K + ++ D + ++ ++ R + V A + F E +
Sbjct: 334 GNFDRCIKYYKDMLDNNCPPNIDTYRKMIRAFLRERKVADALQMFDEMLSRGILPSTGMI 393
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+ + C G + A +K K+ C Y + L GK GT L++++ M E
Sbjct: 394 TLFIEPLCTFGPPHAALLIYKRSRKAGCRISMKAYKLLLERLAMFGKSGTVLQIWEEMQE 453
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG-CLPNVTTYNSLIKHLCKIKRME 379
G D I++ LC ++ A+ V+ E +G CL V Y L L ++ ++E
Sbjct: 454 SGHPSDKEIYEFIVNGLCNVGKVDAAVSVVEESIRKGFCLGRV-VYGKLNNKLLEMNKVE 512
Query: 380 TVY 382
T Y
Sbjct: 513 TAY 515
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 116 CELTLT-DDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE 174
C T+ + LI N I+ FD ++K + + + P + + ++ R R+ +
Sbjct: 317 CPTTMAYNALIFNFISVGNFD--RCIKYYKDM-LDNNCPPNIDTYRKMIRAFLRERKVAD 373
Query: 175 LIQVFDEMPDLVNEKTYGIL------LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
+Q+FDEM + G++ L + H A+ ++ R ++ G + A++
Sbjct: 374 ALQMFDEMLSRGILPSTGMITLFIEPLCTFGPPH---AALLIYKRSRKAGCRISMKAYKL 430
Query: 229 LLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
LL L + K V + + E +++ D + I+NG C +G V A ++ I+
Sbjct: 431 LLERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAAVSVVEESIRKG 490
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQ 316
V Y N L + K+ TA LF+
Sbjct: 491 FCLGRVVYGKLNNKLLEMNKVETAYNLFK 519
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 174/365 (47%), Gaps = 15/365 (4%)
Query: 139 AYTFFKWV--SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
A FF V S D P ++ A++D+L + F + DEM + ++ +
Sbjct: 127 AVAFFHHVLPSLPPDSLPA--LYAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILA 184
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGE-LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
L+ RY A M EA +F R +E+G D + +LL L + + A+ F+S K+
Sbjct: 185 LIRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSV 244
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
F D+ +++ WC G + EA+R + ++ ++ P+ TY ++A+ + G++ A
Sbjct: 245 FTPDVVLYTTLVHAWCRSGRLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQ 304
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L M + G P+ T N I+ A R + L+V +M+ GC P++ TYN L++
Sbjct: 305 ELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETH 364
Query: 373 CKIKR--METVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGC 427
C + ++ + L M K C+P+ TFN +LK L + ERM+ C
Sbjct: 365 CGKGQSNLDAAMKMLTRMIAKG--CIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQC 422
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
K + TYN++++L+ D V ++M+ +G+ P+ +Y +I +G + A
Sbjct: 423 KPNVVTYNLLMRLFNLEKSMDMVLRIKKDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHM 482
Query: 488 YFHEM 492
EM
Sbjct: 483 TLREM 487
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 112/248 (45%), Gaps = 10/248 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
++ +P + A++D + RA + ++ +M D N T+ ++ + A
Sbjct: 276 QQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRS 335
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCR--YKHVEVAETFFESEKNEFGY-DIKTMN 261
E+ + V ++ ++ G D+ + L+ C +++ A + D T N
Sbjct: 336 EQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFN 395
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+L VLGNV A++ ++ + + +C+P+ VTY + + + LR+ + M +
Sbjct: 396 PMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKKDMDAQ 455
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL-PNVTTYN---SLIKHLCKIKR 377
G +P+V T +I+A C + A LREM L P Y+ +L++ +++R
Sbjct: 456 GVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRKAGQLRR 515
Query: 378 METVYEYL 385
E + E +
Sbjct: 516 HEELVEMM 523
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 166/371 (44%), Gaps = 9/371 (2%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYG 192
+E A ++ + R+ SP + +LD L + RF E +V+ M + TYG
Sbjct: 244 FEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYG 303
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
IL++ + V+ A V+ + G + D+S + +L+ C A F++S
Sbjct: 304 ILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFS 363
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDI-IKSKCEPDSVTYATFVNALTKKGKLGTA 311
I T NI+ G G V EA K + + C PD VT+ T ++ L + G A
Sbjct: 364 GIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRA 423
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ + G + DV + + +I+ C R +A EV + M GC PN YN+LI
Sbjct: 424 FEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALING 483
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCK 428
C++ ++ + EM NG C P IT+N L+ L K E E + + M G K
Sbjct: 484 FCRVSKINDAIKIYIEM-TSNGCC-PTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFK 541
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TY +++ D W+E+ G+ D + ++IHGL G++++A
Sbjct: 542 PDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCI 601
Query: 489 FHEMRLKGMVP 499
+ EM+ K P
Sbjct: 602 YLEMKEKNCSP 612
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 143/314 (45%), Gaps = 5/314 (1%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFFES 248
TY I+ + MV EA + + + D F L+ LC + A E
Sbjct: 370 TYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILED 429
Query: 249 EKNEFG-YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+N D+ + + ++N +C G ++A +K+++K C+P+S Y +N + K
Sbjct: 430 ARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSK 489
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A++++ M G P ++T N +ID LC ++ EA + +EM RG P++ TY S
Sbjct: 490 INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYAS 549
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKN--GSCLPNEITFNYLLKSLKKPEEVPWVLERMERN 425
LI+ LC+ K+++ DE+ + + I + L + K E LE E+N
Sbjct: 550 LIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKN 609
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
C + TYN ++ + DK W + G+ PD +Y I GL R +
Sbjct: 610 -CSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEG 668
Query: 486 LSYFHEMRLKGMVP 499
+ +E+ G++P
Sbjct: 669 VLLLNEVLATGIMP 682
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 165/413 (39%), Gaps = 55/413 (13%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV-------NEK 189
+AA F+ + +PG N +LD RARR+ + F + N +
Sbjct: 100 DAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQ 159
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY I+L A V+ A+ +F + G D + L+ L ++ ++ A +
Sbjct: 160 TYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEM 219
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKG 306
N +G D N +L+G G +A + W+ +++ P+ TY ++ L K G
Sbjct: 220 PN-YGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLG 278
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ A ++ M + D VT +I LC + A V +M G + +V+ YN
Sbjct: 279 RFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYN 338
Query: 367 SLIKHLCKIKRMETVYEYLDEME---------------------------------QKNG 393
SLIK C++ R +++ D + +
Sbjct: 339 SLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDA 398
Query: 394 SCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
SC P+++TF L+ L + +LE +G ++ +Y+ + +N C+D
Sbjct: 399 SCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSM----INRFCKDGR 454
Query: 451 RH----TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
H ++ M K G P+ Y +I+G ++ DA+ + EM G P
Sbjct: 455 THDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCP 507
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 133/258 (51%), Gaps = 15/258 (5%)
Query: 127 NVINRYRFDWEA--AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
++INR+ D A +K + ++G P S+V+NA+++ R + + I+++ EM
Sbjct: 444 SMINRFCKDGRTHDANEVYKNMVKDG-CKPNSHVYNALINGFCRVSKINDAIKIYIEMTS 502
Query: 183 ----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
P ++ TY L++ A +EA + E G D+ + +L+ LCR K
Sbjct: 503 NGCCPTII---TYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKK 559
Query: 239 VEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
V+VA ++ E + G + M NI+++G C G V EA + ++ + C P+ VTY
Sbjct: 560 VDVALRIWD-EILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYN 618
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
T ++ + G + A L+ A+ + G KPD+VT N I LC R PE + +L E+
Sbjct: 619 TLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLAT 678
Query: 357 GCLPNVTTYNSLIKHLCK 374
G +P V T++ L++ + K
Sbjct: 679 GIMPTVITWSILVRAVIK 696
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 10/184 (5%)
Query: 346 ALEVLREMKNR-GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK--NGSCLPNEITF 402
AL R++ + GC P V ++N+L+ + +R + + PN T+
Sbjct: 102 ALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTY 161
Query: 403 NYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
N +L+SL +V + + R G TY+ ++ D D +EM
Sbjct: 162 NIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPN 221
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM-RLKGMVPEPRTGILVNDMNIKL---K 515
G+ D Y ++ G + G E A+ + ++ R G P T ++ D KL K
Sbjct: 222 YGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFK 281
Query: 516 ERGE 519
E GE
Sbjct: 282 EAGE 285
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 168/358 (46%), Gaps = 9/358 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP F +++D LG+ R + +++++M D + N Y L+ + E+
Sbjct: 474 SPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHK 533
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWC 268
+F G DL + + + FE K+ F D+ + +I+++G
Sbjct: 534 IFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLV 593
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G E + + + C D+ Y TF++ K GK+ A +L + M KGR+P VV
Sbjct: 594 KAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVV 653
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +ID L R+ EA + E K+ G NV Y+SLI K+ R++ Y ++E+
Sbjct: 654 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 713
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWD 445
QK + PN T+N LL +L K EE+ L + M+ + TY++++
Sbjct: 714 MQKGLT--PNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVR 771
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+K W+EM+K+G+ P+ +YT MI GL G + +A S F + G VP+ +
Sbjct: 772 KFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSAS 829
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 170/372 (45%), Gaps = 8/372 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVF 211
P +N IL LG+ R E ++ F+EM N TY +L++ A VE A V
Sbjct: 371 PSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVR 430
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF-GYDIKTMNIILNGWCVL 270
D KE G ++ ++ LC+ K ++ A + FE ++ D T +++G
Sbjct: 431 DAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQ 490
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G V +A R ++ ++ S P++V Y + + + K G+ ++F+ M +G PD+
Sbjct: 491 GRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLL 550
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +D + + + E+K+RG +P+V +Y+ LI L K YE M++
Sbjct: 551 NAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKE 610
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ C+ + +N + K +V +LE M+ G + + TY ++ D
Sbjct: 611 QG--CVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRL 668
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
D+ +EE + G+ + Y+ +I G GR+++A E+ KG+ P T +
Sbjct: 669 DEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 728
Query: 508 NDMNIKLKERGE 519
D +K +E E
Sbjct: 729 LDALVKAEEINE 740
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 193/492 (39%), Gaps = 84/492 (17%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
++E AL+ + DL++ V+ R + D A ++F+W R+ D + ++++L V+
Sbjct: 81 DVENALSLFVESPKTDLVIGVLRRAK-DVNQAISYFRWTERKTDQALCPEAYDSLLLVMA 139
Query: 168 RARRFVELIQVFDEMP----------------------------DLVN----------EK 189
+ +F Q+ EM DL+
Sbjct: 140 KNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFS 199
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ES 248
Y L+ ++ + + +F + +E G + F ++ R ++ A + E
Sbjct: 200 AYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEM 259
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ N DI N+ ++ + G V A +F+ +I PD VTY + + L K +L
Sbjct: 260 KSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRL 319
Query: 309 GTALRLFQAMWE-----------------------------------KGRKPDVVTCNCI 333
A+ +F+ M + +G P V+ NCI
Sbjct: 320 DEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCI 379
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
+ L K R+ EAL EMK + PN++TYN LI LCK +E ++ D M K
Sbjct: 380 LTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAM--KEA 436
Query: 394 SCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
PN +T N ++ L KK +E + E M C T+ ++ D
Sbjct: 437 GLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDA 496
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDM 510
+E+M P+ YT +I + GR ED F EM +G P+ R L+N
Sbjct: 497 YRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLR---LLNAY 553
Query: 511 NIKLKERGEQGK 522
+ + GE GK
Sbjct: 554 MDCVFKAGETGK 565
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 169/400 (42%), Gaps = 40/400 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVN---EKTYGI 193
+ A+ FF + G P + +++ VL + R E +++F++M N Y
Sbjct: 285 DMAWKFFHEIKSHG-LLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNT 343
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
++ Y +A +EA + +R+K G + + A+ +L L + + A FE K +
Sbjct: 344 MIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA 403
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
++ T N++++ C G V A + + ++ P+ +T ++ L K KL A
Sbjct: 404 APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACS 463
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+F+ M K PD VT +ID L + R+ +A + +M + +PN Y SLIK
Sbjct: 464 IFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFF 523
Query: 374 KIKRMETVYEYLDEM---------------------------------EQKNGSCLPNEI 400
K R E ++ EM E K+ +P+ +
Sbjct: 524 KCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVM 583
Query: 401 TFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
+++ L+ L K E + M+ GC + T YN + + +K EEM
Sbjct: 584 SYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEM 643
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ KG P +Y +I GL RL++A F E + G+
Sbjct: 644 KTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGL 683
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 117/245 (47%), Gaps = 5/245 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
AY + + +G P + +++D L + R E +F+E +N Y L+
Sbjct: 636 AYQLLEEMKTKGR-QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLI 694
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+ + ++EA + + + G ++ + LL L + + + A F++ KN G
Sbjct: 695 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGT 754
Query: 256 -DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
+ T +I++NG C + +A FW+++ K +P+++TY T + L K G + A L
Sbjct: 755 PNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSL 814
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F+ G PD + N II+ L + +R EA ++ E + +GC + T +L+ L K
Sbjct: 815 FERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQK 874
Query: 375 IKRME 379
+ +E
Sbjct: 875 DECLE 879
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 121/265 (45%), Gaps = 12/265 (4%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIG 209
++ +N +D ++ + + Q+ +EM P +V TYG +++ A ++EA
Sbjct: 617 THAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVV---TYGSVIDGLAKIDRLDEAYM 673
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWC 268
+F+ K G ++ + +L+ + ++ A E + ++ T N +L+
Sbjct: 674 LFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 733
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+ EA ++++ K P+ +TY+ +N L + K A +Q M ++G KP+ +
Sbjct: 734 KAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTI 793
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +I L I EA + K G +P+ +YN++I+ L +R Y+ +E
Sbjct: 794 TYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEET 853
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPE 413
K C + T LL +L+K E
Sbjct: 854 RMK--GCNIHTKTCIALLDALQKDE 876
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 82/187 (43%), Gaps = 10/187 (5%)
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ-KNGSCLPNEITFNYLL 406
++L EM G P+ T LI K ++ ++ + M + K T L
Sbjct: 149 QILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGAL 208
Query: 407 KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
S+++ + + + +M+ G ++S + +++++ D +EM+ + D
Sbjct: 209 SSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADI 268
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-----GILVN----DMNIKLKER 517
Y V I G+++ A +FHE++ G++P+ T G+L D +++ E+
Sbjct: 269 VLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQ 328
Query: 518 GEQGKKV 524
EQ + V
Sbjct: 329 MEQNRNV 335
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 157/335 (46%), Gaps = 9/335 (2%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L A + +E + P++V Y L+ YA+ +EEA + D G D+
Sbjct: 365 LSLANKLLEKMTFSGLKPNVV---VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFC 421
Query: 226 FQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ ++ L + +E A T+ E + D T + G+ G + EA +++ +++
Sbjct: 422 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 481
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
P++ Y +N K G L AL +F+ + G PDV TC+ I L R+
Sbjct: 482 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 541
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EAL+V E+K +G +P+V TY+SLI CK +E +E DEM K + PN +N
Sbjct: 542 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA--PNIFIYNA 599
Query: 405 LLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ L K ++ + + M G + + TY+ ++ Y + + + EM KG
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ P Y ++HG +G +E A++ F EM KG
Sbjct: 660 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 694
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 189/438 (43%), Gaps = 44/438 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
E A T+ + G P + F A + + + E + FDEM D + N Y +
Sbjct: 436 EEASTYLLEIQGRG-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 494
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDL---SAFQNLLLWLCRYKHVEVAETFFESEK 250
L+N + A + EA+ +F G L D+ SAF + LL R + E + F E ++
Sbjct: 495 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ--EALKVFSELKE 552
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
D+ T + +++G+C G V +A ++ P+ Y V+ L K G +
Sbjct: 553 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 612
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A +LF M EKG +PD VT + +ID C + + EA + EM ++G P+ YN+L+
Sbjct: 613 ARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVH 672
Query: 371 HLCKIKRMETVYEYLDEMEQK------------NGSC--------------------LPN 398
CK ME EM QK +G C +P+
Sbjct: 673 GCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 732
Query: 399 EITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+T+ ++ K EE + + M+ + T TY ++ Y +V +E
Sbjct: 733 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFE 792
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLK 515
+M KG+ PD+ +Y ++I+ + L +A E+ KGM+ + L+ K +
Sbjct: 793 KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 852
Query: 516 ERGEQGKKVIKLTSLGLK 533
+ E K + ++ LGLK
Sbjct: 853 DLTEASKLLDEMGELGLK 870
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 198/471 (42%), Gaps = 33/471 (7%)
Query: 48 IINLQARNSEFLFLGRIETAQLVHSLANSDEKSE-----FQRYPGDEIAINVQNILKTCS 102
I+ +Q NSE L Q++ + +S + F+ Y G V +IL S
Sbjct: 109 ILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPV--VFDILID-S 165
Query: 103 VSTKGEIEKALNQCELTLTDDLIVNVI--NRYRFDWEAAYTFFKWVSREGDYSPGSNVFN 160
G +++A N + D +++++I N R E P + +
Sbjct: 166 YKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLV------------PNTYTYT 213
Query: 161 AILDVLGRARRFVELIQVFDEMPDLVNEKTY---GILLNRYAAAHMVEEAIGVFDRRKEF 217
I L RA+R E F+EM + Y L++ + ++E + + D
Sbjct: 214 IITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSC 273
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYE 275
G +L + L+ LC++ +E A + G + +T +++ G+C N+
Sbjct: 274 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT-LGCKPNSRTFCLLIEGYCREHNMGR 332
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A ++ K P +V+Y +N L L A +L + M G KP+VV + +I
Sbjct: 333 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIM 392
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
+ RI EA +L M G P++ YN++I L K +ME YL E++ +
Sbjct: 393 GYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLK- 451
Query: 396 LPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+ +TF + K E + M +G + Y V++ + +
Sbjct: 452 -PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 510
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + G+ PD ++ + IHGL GR+++AL F E++ KG+VP+ T
Sbjct: 511 IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 561
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 155/343 (45%), Gaps = 27/343 (7%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRK------------------EFGELDDLSAFQNLLL 231
+ IL++ Y M++EA VF K E G + + + +
Sbjct: 158 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITA 217
Query: 232 WLCRYKHVEVAE-TFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
LCR K + A+ TF E +K D + +++G+ G++ E R KD++ S P
Sbjct: 218 GLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI-KDVMVSCGIP 276
Query: 291 -DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
+ +TY ++ L K GK+ A + + M G KP+ T +I+ C + + ALE+
Sbjct: 277 INLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALEL 336
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL--- 406
L EM+ R +P+ +Y ++I LC K + + L++M PN + ++ L+
Sbjct: 337 LDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG--LKPNVVVYSTLIMGY 394
Query: 407 KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
S + EE +L+ M +G YN I+ ++ E++ +G+ PD
Sbjct: 395 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 454
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP-EPRTGILVN 508
++ I G G++ +A YF EM G++P P +L+N
Sbjct: 455 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 497
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 147/339 (43%), Gaps = 8/339 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIG 209
+P ++NA++D L ++ ++FD MP+ E TY +++ Y + V EA
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 650
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCV 269
+F G + L+ C+ +E A F + + N +++G+C
Sbjct: 651 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCK 710
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ EA + ++++I + PD VTY T ++ K GK+ A LF+ M E+ D VT
Sbjct: 711 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 770
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
++ + E + +M +G P+ TY +I CK + ++ DE+
Sbjct: 771 YTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVV 830
Query: 390 QKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
K L + L+ +L K E E +L+ M G K S + +++ +
Sbjct: 831 GKG--MLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGK 888
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
D+ +E ++ G+ PD + +++G + EDA
Sbjct: 889 MDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDA 927
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 170/402 (42%), Gaps = 54/402 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +A + L + R E ++VF E+ PD+ TY L++ + VE+A
Sbjct: 522 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF---TYSSLISGFCKQGEVEKA 578
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNG 266
+ D G ++ + L+ LC+ ++ A F+ + D T + +++G
Sbjct: 579 FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 638
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK-- 324
+C NV EA + ++ +P S Y V+ K+G + A+ LF+ M +KG
Sbjct: 639 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATT 698
Query: 325 --------------------------------PDVVTCNCIIDALCFKKRIPEALEVLRE 352
PD VT +ID C ++ EA + +E
Sbjct: 699 LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 758
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
M+ R + + TY SL+ K+ + V+ ++M K P+E+T+ ++ + K
Sbjct: 759 MQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVK--PDEVTYGLVIYAHCKE 816
Query: 413 EEVPWVLE-RMERNGCKMSTDTYNVILKLYVNWDC--ED--KVRHTWEEMEKKGMGPDQR 467
+ + + R E G M T I L + C ED + +EM + G+ P
Sbjct: 817 DNLVEAFKLRDEVVGKGMLTK--GTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 874
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI-LVN 508
+ + ++ ++ G++++A F ++ G+VP+ T I LVN
Sbjct: 875 ACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 916
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 109/244 (44%), Gaps = 4/244 (1%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLN 196
A++ F + +G P S V+NA++ + + + +F EM ++ L++
Sbjct: 648 AFSLFHEMPSKG-VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLID 706
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGY 255
Y + ++EA +F + D + ++ W C+ +E A F E ++
Sbjct: 707 GYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIV 766
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D T ++ G+ LG E ++ ++ +PD VTY + A K+ L A +L
Sbjct: 767 DTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLR 826
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ KG + +I ALC ++ + EA ++L EM G P++ ++L++ +
Sbjct: 827 DEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEA 886
Query: 376 KRME 379
+M+
Sbjct: 887 GKMD 890
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 172/361 (47%), Gaps = 20/361 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P N FN + L + R E ++ D M P N TYG+L++ V+EA
Sbjct: 285 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTP---NSFTYGVLMHGLCRMGKVDEA 341
Query: 208 IGVFDRRKEFGELDDLSAFQNLL-LWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILN 265
+ ++ ++ F L+ ++ R + E ES + G DI T N ++
Sbjct: 342 RMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 397
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G + A+ ++ CEP+ +TY ++ K+G+L A + M KG
Sbjct: 398 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 457
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ V NC+I ALC +++ +AL + +M ++GC P++ T+NSLI LCK+ + E
Sbjct: 458 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 517
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+M + + N IT+N L+ + + +E ++ M GC + TYN ++K
Sbjct: 518 QDMLLE--GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALC 575
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+K +E+M KG+ P+ S ++I+GL G ++ AL + +M +G+ P+
Sbjct: 576 RAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIV 635
Query: 503 T 503
T
Sbjct: 636 T 636
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 6/258 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + ++D + R E V DEM +N Y L++ V++A+ +
Sbjct: 422 PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNM 481
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
F G D+ F +L+ LC+ E A ++ E + T N +++ +
Sbjct: 482 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 541
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA + D++ C D +TY + AL + G + L LF+ M KG P+ ++
Sbjct: 542 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 601
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
CN +I+ LC I ALE LR+M +RG P++ TYNSLI LCK R + D++
Sbjct: 602 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL- 660
Query: 390 QKNGSCLPNEITFNYLLK 407
Q G C P+ IT+N L+
Sbjct: 661 QVEGIC-PDAITYNTLIS 677
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 165/373 (44%), Gaps = 15/373 (4%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKT 190
D + F+W + Y +V+ ++D LG A F + + +M + E
Sbjct: 89 LDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESL 148
Query: 191 YGILLNRYAAAHMVEEAIGVF-DRRKEFGELDDLSAFQNLL-LWLCRYKHVEVAETFFES 248
+ +++ Y A + +A + D R + ++ +L + L V F+E
Sbjct: 149 FILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEM 208
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ T +++ C++ V A KD+ + C P+++ Y T ++AL K G++
Sbjct: 209 LSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRV 268
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
L+L + M G PDV T N I LC RI EA +++ M RG PN TY L
Sbjct: 269 NEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVL 328
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVL-ERMER 424
+ LC++ +++ L+++ PN + FN L+ S + +E V+ E M
Sbjct: 329 MHGLCRMGKVDEARMLLNKVPN------PNVVLFNTLINGYVSRGRLDEAKAVMHESMLS 382
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
GC TYN ++ R EM+ KG P+ +YT++I +GRLE+
Sbjct: 383 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 442
Query: 485 ALSYFHEMRLKGM 497
A + EM KG+
Sbjct: 443 ARNVLDEMSGKGL 455
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 165/392 (42%), Gaps = 43/392 (10%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
++P S + ++ L R + E + +++P+ N + L+N Y + ++EA V
Sbjct: 318 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-PNVVLFNTLINGYVSRGRLDEAKAVM 376
Query: 212 -DRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCV 269
+ G D+ + L+L LC+ + V E E + ++ T I+++ +C
Sbjct: 377 HESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK 436
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA+ ++ ++V Y ++AL K K+ AL +F M KG KPD+ T
Sbjct: 437 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 496
Query: 330 CNCIIDALC---------------------------------FKKR--IPEALEVLREMK 354
N +I LC F +R + EAL+++ +M
Sbjct: 497 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 556
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
RGC + TYN LIK LC+ +E ++M K + PN I+ N L+ L +
Sbjct: 557 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLN--PNNISCNILINGLCRTGN 614
Query: 415 VPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
+ LE M G TYN ++ + + +++++ +G+ PD +Y
Sbjct: 615 IQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNT 674
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+I +G +DA G +P T
Sbjct: 675 LISWHCKEGMFDDAHLLLSRGVDSGFIPNEVT 706
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 118/243 (48%), Gaps = 7/243 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGI 193
+ A F +S +G P FN+++ L + +F E + ++ +M + N TY
Sbjct: 476 QDALNMFGDMSSKG-CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 534
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFG-ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
L++ + ++EA+ + + G LDD++ + L+ LCR ++E FE ++
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT-YNGLIKALCRAGNIEKGLALFEDMMSK 593
Query: 253 -FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ + NI++NG C GN+ A F +D+I PD VTY + +N L K G+ A
Sbjct: 594 GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEA 653
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L LF + +G PD +T N +I C + +A +L + G +PN T+ L+ +
Sbjct: 654 LNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSN 713
Query: 372 LCK 374
K
Sbjct: 714 FIK 716
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 176/380 (46%), Gaps = 26/380 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY F + ++G P FN ++ VL + E ++F ++ P+L T+
Sbjct: 200 AYHLFDEMLKQG-ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLF---TFN 255
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES---- 248
I + ++EA + + G D+ ++ L+ C++ + AE +
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315
Query: 249 --EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
E NEF Y N I+NG+C G + A + +D + PD TY++ +N L G
Sbjct: 316 GVEPNEFTY-----NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDG 370
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ A+ +F EKG K ++ N ++ L + + +AL+++++M GC P++ TYN
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERME 423
++ LCK+ + L++ K C+P+ TFN L+ K ++ +L+ M
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAK--GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+G TYN +L D V T++ M +KG P+ +Y ++I ++
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548
Query: 484 DALSYFHEMRLKGMVPEPRT 503
+A+ F EM+ +G+ P+ T
Sbjct: 549 EAMELFKEMKTRGLTPDIVT 568
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 179/401 (44%), Gaps = 13/401 (3%)
Query: 126 VNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL 185
V + RY+ D A F V E + + +++ LG +F + V EM
Sbjct: 10 VAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKN 69
Query: 186 VNEK----TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
V+ K Y ++ Y V+EA+ VF+R + + ++ ++ L Y +
Sbjct: 70 VDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQ 129
Query: 242 AETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A + K+ Y D+ T I + +C+ G A R ++ CE ++V+Y ++
Sbjct: 130 AHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVIS 189
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
K+ A LF M ++G PD++T N +I LC K + E+ ++ ++ RG P
Sbjct: 190 GFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCP 249
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPW 417
N+ T+N I+ LC+ ++ L+ + + + P+ I++N L+ K E
Sbjct: 250 NLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT--PDVISYNTLICGFCKHSKLVEAEC 307
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
L +M +G + + TYN I+ + + KG PD+ +Y+ +I+GL
Sbjct: 308 YLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLC 367
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG 518
+ G + A++ F+E KG + IL N + L ++G
Sbjct: 368 NDGDMNRAMAVFYEAMEKGF---KHSIILYNTLVKGLSKQG 405
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 165/367 (44%), Gaps = 23/367 (6%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL----------VNEKTYGILLNRYAA 200
D P +NAI+++L F + +V+ M D+ + K++ I AA
Sbjct: 106 DCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAA 165
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM 260
++ G + EF + + C+ +E F E K DI T
Sbjct: 166 LRLLNNMPG---QGCEFNAVSYCAVISGFYKENCQ---IEAYHLFDEMLKQGICPDILTF 219
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N +++ C GNV E+++ + ++K P+ T+ F+ L +KG + A RL +++
Sbjct: 220 NKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVS 279
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G PDV++ N +I C ++ EA L +M N G PN TYN++I CK M+
Sbjct: 280 EGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQN 339
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL----ERMERNGCKMSTDTYNV 436
+ L + K +P+E T++ L+ L ++ + E ME+ G K S YN
Sbjct: 340 ADKILRDAMFK--GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK-GFKHSIILYNT 396
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++K + ++M + G PD +Y ++++GL G L DA ++ KG
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG 456
Query: 497 MVPEPRT 503
+P+ T
Sbjct: 457 CIPDIFT 463
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 185/423 (43%), Gaps = 37/423 (8%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVIN---------RYRFDWEAAYTFFKWVSREGDYSPGS 156
KG I++A E +++ L +VI+ ++ EA K V+ P
Sbjct: 264 KGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVN--SGVEPNE 321
Query: 157 NVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
+N I++ +A ++ + +PD E TY L+N + A+ V
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPD---EFTYSSLINGLCNDGDMNRAMAV 378
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCV 269
F E G + + L+ L + V + + + ++ DI T N+++NG C
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+G + +A D I C PD T+ T ++ K+ + A+ + M G PDV+T
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVIT 498
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +++ LC +++ ++ + M +GC PN+ TYN LI+ CK +++ E EM+
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMK 558
Query: 390 QKNGSCLPNEITFNYLL------KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLY-- 441
+ + P+ +T L+ L K E+ +E+ + ST +N+++ +
Sbjct: 559 TRGLT--PDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS--YSTAIFNIMINAFCX 614
Query: 442 -VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+N +K+ H +M PD +Y VMI G ++ A ++ E KG+VP
Sbjct: 615 KLNVSMAEKLFH---KMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671
Query: 501 PRT 503
T
Sbjct: 672 FTT 674
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 144/323 (44%), Gaps = 5/323 (1%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y L+ + +V +A+ + E G D+ + ++ LC+ + A
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453
Query: 251 NEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ DI T N +++G+C N+ +A ++ PD +TY T +N L K KL
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLD 513
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+ F+AM EKG P+++T N +I++ C +++ EA+E+ +EMK RG P++ T +LI
Sbjct: 514 NVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNG 426
LC ++ YE +E++ I FN ++ + V + +M +
Sbjct: 574 CGLCSNGELDKAYELFVTIEKEYKFSYSTAI-FNIMINAFCXKLNVSMAEKLFHKMGGSD 632
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
C TY V++ Y D E KG+ P + +++ L RL +A+
Sbjct: 633 CAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAV 692
Query: 487 SYFHEMRLKGMVPEPRTGILVND 509
+ M G+VPE I D
Sbjct: 693 VIINLMVQNGIVPEEVNSIFEAD 715
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 11/216 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P +N +L+ L +AR+ ++ F M P+++ TY IL+ + V E
Sbjct: 493 TPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII---TYNILIESFCKDRKVSE 549
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN-EFGYDIKTMNIIL 264
A+ +F K G D+ L+ LC ++ A E F EK +F Y NI++
Sbjct: 550 AMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMI 609
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N +C NV A++ + + S C PD+ TY +++ K G + A KG
Sbjct: 610 NAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLV 669
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
P TC +++ LC R+ EA+ ++ M G +P
Sbjct: 670 PSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 15/274 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P FN ++D + R + I++ D M PD++ TY LLN A ++
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI---TYNTLLNGLCKARKLDNV 515
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNG 266
+ F E G ++ + L+ C+ + V E E F E + DI T+ ++ G
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575
Query: 267 WCVLGNVYEAKRFWKDIIKS-KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G + +A + I K K + + +NA K + A +LF M P
Sbjct: 576 LCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAP 635
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D T +ID+ C I A L E ++G +P+ TT ++ LC R+ +
Sbjct: 636 DNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVII 695
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
+ M Q NG +P E+ N + ++ KK P ++
Sbjct: 696 NLMVQ-NG-IVPEEV--NSIFEADKKEVAAPKIV 725
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 164/364 (45%), Gaps = 34/364 (9%)
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPDL--------------VNEKTYGILLNRYAAAH 202
+ ++ ++D RARR PDL +++ T LL A+
Sbjct: 158 HTYSILMDCCCRARR-----------PDLGLVLFGCILRTGLKIHQITASTLLKCLCYAN 206
Query: 203 MVEEAIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY---DIK 258
EEA+ V R E G + ++ ++ +L LC + A F+ E G ++
Sbjct: 207 RTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVV 266
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
N +++G+ G +A + ++ + +PD VTY ++AL K + A + + M
Sbjct: 267 AYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQM 326
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
G +PD VT NC+I R+ EA ++ R+MK+RG +PN+ NS + LCK R
Sbjct: 327 TTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRS 386
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYN 435
+ E D M K P+ +++ LL ++ + M+ NG +N
Sbjct: 387 KEAAEIFDSMTAKGHK--PDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFN 444
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+++ Y D + EM+++G+ PD +Y+ +I GRL DA+ F++M +
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVAR 504
Query: 496 GMVP 499
G+ P
Sbjct: 505 GIQP 508
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 181/401 (45%), Gaps = 54/401 (13%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A + F ++R+G P +N I+D L +AR + V +M PD V TY
Sbjct: 284 ACSLFHEMTRQG-VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTV---TYN 339
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES---- 248
+++ YA ++EA +F + K G + ++ + L LC++ + A F+S
Sbjct: 340 CMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAK 399
Query: 249 --------------------------------EKNEFGYDIKTMNIILNGWCVLGNVYEA 276
+ N D + NI+++ + G V +A
Sbjct: 400 GHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDA 459
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
+ ++ + PD VTY+T ++A ++ G+L A+ F M +G +P+ + II
Sbjct: 460 MLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQG 519
Query: 337 LCFKKRIPEALEVLREMKNRGCL-PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
C + +A E++ EM N+G P++ +NS+I LCK R+ ++ D +
Sbjct: 520 FCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGER- 578
Query: 396 LPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYV-NWDCEDKVR 451
P+ ITF L+ + K ++ +L+ ME G + TY+ +L Y N D +
Sbjct: 579 -PDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLT 637
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ EM++KG+ P+ +Y +M+ GL+ GR A FHEM
Sbjct: 638 -LFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM 677
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 172/386 (44%), Gaps = 28/386 (7%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI--------QVFDEM------PD 184
A+ F + R+ PG ++ N L L RA I +F+ + P
Sbjct: 93 AHHMFDELFRQATPVPGRSL-NGFLTALARATSSSACITDGPALALALFNRVCREQAGPR 151
Query: 185 LV--NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG-ELDDLSAFQNLLLWLCRYKHVEV 241
+V TY IL++ A + + +F G ++ ++A LL LC E
Sbjct: 152 VVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITA-STLLKCLCYANRTEE 210
Query: 242 AETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYAT 297
A +E G ++ + +IIL G C A ++ + K C P+ V Y T
Sbjct: 211 AVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNT 270
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
++ K+G+ G A LF M +G KPDVVT N IIDALC + + +A VLR+M G
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNG 330
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEE 414
P+ TYN +I + R++ + +M+ + +PN + N L SL K +E
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRG--LIPNIVICNSFLASLCKHGRSKE 388
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+ + M G K +Y +L Y + + + M+ G+ D R + ++IH
Sbjct: 389 AAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIH 448
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPE 500
+G ++DA+ F EM+ +G+ P+
Sbjct: 449 AYAKRGMVDDAMLIFTEMQQQGVSPD 474
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 172/394 (43%), Gaps = 48/394 (12%)
Query: 172 FVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
F ++I +F+ M + + + IL++ YA MV++A+ +F ++ G D+ +
Sbjct: 421 FADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYST 480
Query: 229 LLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII-KS 286
++ R + + E F + + + I+ G+C+ G + +AK ++I K
Sbjct: 481 VISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKG 540
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC-------- 338
PD V + + +N+L K G++ A +F + + G +PDV+T +ID C
Sbjct: 541 IPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKA 600
Query: 339 --------------------------FKK-RIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
FK RI + L + REM+ +G PN TY ++
Sbjct: 601 FKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG 660
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCK 428
L + R + EM + +G+ + I + +L L + +E + +++ K
Sbjct: 661 LFRAGRTVAARKKFHEMIE-SGTTVTVSI-YGIILGGLCRNNCADEAIILFQKLGTMNVK 718
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
S N ++ +++ + + + G+ P++ +Y VMI L G +EDA +
Sbjct: 719 FSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNM 778
Query: 489 FHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
F M G+VP R L+N + L E+GE K
Sbjct: 779 FSSMEKSGIVPGSR---LLNRIIRMLLEKGEIAK 809
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 108/288 (37%), Gaps = 48/288 (16%)
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV-----TCNCIIDALCFKKRIPEA 346
++ AT +A G AL LF + + P VV T + ++D C +R
Sbjct: 118 ALARATSSSACITDGP-ALALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLG 176
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME-----------------TVYEY----- 384
L + + G + T ++L+K LC R E V+ Y
Sbjct: 177 LVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILK 236
Query: 385 --------------LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGC 427
M ++ G+C PN + +N ++ K E + M R G
Sbjct: 237 GLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGV 296
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
K TYN+I+ DK +M G PD +Y MIHG GRL++A
Sbjct: 297 KPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAK 356
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
F +M+ +G++P ++ N L + G + S+ KG+
Sbjct: 357 MFRKMKSRGLIPNI---VICNSFLASLCKHGRSKEAAEIFDSMTAKGH 401
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 88/219 (40%), Gaps = 10/219 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
++ +LD + R + + +F EM P+ V TYGI+L A A F
Sbjct: 619 YSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTV---TYGIMLAGLFRAGRTVAARKKFH 675
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCVLG 271
E G +S + +L LCR + A F+ + I +N ++N +
Sbjct: 676 EMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQ 735
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
EAK + I S P+ TY + L K G + A +F +M + G P N
Sbjct: 736 RKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLN 795
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
II L K I +A L ++ + L +T + ++
Sbjct: 796 RIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLS 834
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 175/361 (48%), Gaps = 20/361 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + FN ++ L R R E ++ D M P N+ TYG+L+N V+EA
Sbjct: 276 PDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTP---NDITYGVLMNGLCRVGKVDEA 332
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE--KNEFGYDIKTMNIILN 265
+ ++ ++ F L+ + ++ A F + KN D+ T N +++
Sbjct: 333 QVLLNKVPTPNDVH----FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIH 388
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G + A D+ + C P+ +TY T ++ KK +L A + M KG +
Sbjct: 389 GLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFEL 448
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+++ N ++ ALC ++P+AL++L EM ++GC P++ T+N+LI LCK+ R E
Sbjct: 449 NIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALY 508
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+M + N +T+N L+ + + +E ++ M GC + TYN ++K +
Sbjct: 509 RDMLLD--GVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFC 566
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+K ++EM +K + P S ++I+GL G++ +AL +M +G+ P+
Sbjct: 567 KLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVV 626
Query: 503 T 503
T
Sbjct: 627 T 627
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 170/371 (45%), Gaps = 15/371 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D + F+W + Y +V++ ++D LG A+ F + ++ ++ + E +
Sbjct: 81 DVSTSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLF 140
Query: 192 GILLNRYAAAHMVEEAI-GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESE 249
++ Y A++ +A + D + + ++ +L L VA F+E
Sbjct: 141 ICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEML 200
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ T +++ C++ V A +D+ K C P+SV Y T ++AL+K+ ++
Sbjct: 201 SKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVN 260
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL+L + M+ G PDV T N +I LC RI E +++ M RG PN TY L+
Sbjct: 261 EALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLM 320
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL----KSLKKPEEVPWVLERMERN 425
LC++ +++ L+++ PN++ F L+ KS + E ++ ++M +N
Sbjct: 321 NGLCRVGKVDEAQVLLNKVPT------PNDVHFTILINGYVKSGRLDEANAFLYDKMIKN 374
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
GC+ T+N ++ +M G P+ +YT ++ G K +LE+A
Sbjct: 375 GCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEA 434
Query: 486 LSYFHEMRLKG 496
+EM KG
Sbjct: 435 GYVLNEMSAKG 445
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 6/258 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
+P + +LD + + E V +EM +N Y +LL V +A+
Sbjct: 412 TPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALD 471
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWC 268
+ + G D+ F L+ LC+ E A + + + + T N +++ +
Sbjct: 472 MLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFL 531
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G + EA + D++ C D +TY + A K G AL LF M K P +
Sbjct: 532 RGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNI 591
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+CN +I+ LC ++ ALE+LR+M +RG P+V TYNSLI LCK+ + + +++
Sbjct: 592 SCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKL 651
Query: 389 EQKNGSCLPNEITFNYLL 406
+ + P+ IT+N L+
Sbjct: 652 QAEGIQ--PDAITYNTLI 667
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
+N ++ R E +++ ++M P ++E TY L+ + E+A+G+FD
Sbjct: 523 YNTLIHAFLRGGAIQEALKLVNDMLFRGCP--LDEITYNGLIKAFCKLGATEKALGLFDE 580
Query: 214 --RKEFGELDDLSAFQNLLL-WLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCV 269
RK+ ++S NLL+ LCR V E + D+ T N ++NG C
Sbjct: 581 MVRKDLVP-SNISC--NLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCK 637
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+GN+ EA + + +PD++TY T + + G A L E P+ VT
Sbjct: 638 MGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVT 697
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 165/365 (45%), Gaps = 23/365 (6%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + ++D L +A R E ++F +M PD Y L+ + EE
Sbjct: 109 SPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF---VYTALIKGLCKSGKPEE 165
Query: 207 AIGVFD----RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTM 260
A ++ R+ + D+ + +L+ LC+ + A F+ E E G+ D T
Sbjct: 166 AYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTY 225
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
I++G C LG V E + ++ EPD+VTYA ++ K + A R+++ M +
Sbjct: 226 TSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQ 285
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G VT N I+D LC R+ EA M+ RGC+ V TY++L+ C +
Sbjct: 286 SGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSA 345
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP----WVLERMERNGCKMSTDTYNV 436
E M + C PN +++N +++ L + ++ + + ++R C T+N
Sbjct: 346 AVELFRRMLDRG--CEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCP-DVYTFNA 402
Query: 437 ILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
L L D +E M +G P+ SY++++ G+ G LE AL F EM +
Sbjct: 403 FLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSR 462
Query: 496 GMVPE 500
G+ P+
Sbjct: 463 GVAPD 467
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 170/355 (47%), Gaps = 21/355 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDE----------MPDLVNEKTYGILLNRYAAAHM 203
P + V+ A++ L ++ + E ++ E +PD+V TY L++ A
Sbjct: 145 PDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVV---TYTSLIDGLCKAGR 201
Query: 204 VEEAIGVFDRRK-EFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMN 261
+ EA VFD E G + D + +++ LC+ VE E F E + D T
Sbjct: 202 ILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYA 261
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++G+ + +A R ++ +++S +VTY ++ L K G++ A F AM E+
Sbjct: 262 ALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEER 321
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G VVT + ++D C + + A+E+ R M +RGC PN+ +YN +I+ LC+ ++
Sbjct: 322 GCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKA 381
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL-KKPEEVP---WVLERMERNGCKMSTDTYNVI 437
Y Y +++ Q+ P+ TFN L L ++ + V + E M G + +Y+++
Sbjct: 382 YFYFEKLLQRR--LCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSIL 439
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ + + EM +G+ PD + +I L GR+++AL F E+
Sbjct: 440 MDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL 494
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 164/377 (43%), Gaps = 15/377 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF---VELIQVFDEMPDLVNEKTYGILL 195
A++ + R G P +N +D L +A R +L++ DE L TY L+
Sbjct: 26 AFSVLERAVRAG-CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALV 84
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE-TFFESEKNEFG 254
+ A ++EA+ V ++ E G L + ++ L + VE A F + N
Sbjct: 85 DGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCR 144
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK----CEPDSVTYATFVNALTKKGKLGT 310
D ++ G C G EA +K+ K PD VTY + ++ L K G++
Sbjct: 145 PDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILE 204
Query: 311 ALRLFQ-AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A ++F E+G PD VT IID LC R+ E E EM+NRG P+ TY +LI
Sbjct: 205 ARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALI 264
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNG 426
K K + + +M Q + + +T+N +L L K V ME G
Sbjct: 265 DGFMKAKMIPKAHRVYRQMLQSGT--VVSTVTYNIILDGLCKAGRVAEAYATFLAMEERG 322
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
C + TY+ ++ + + + M +G P+ SY ++I GL G+L A
Sbjct: 323 CVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAY 382
Query: 487 SYFHEMRLKGMVPEPRT 503
YF ++ + + P+ T
Sbjct: 383 FYFEKLLQRRLCPDVYT 399
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 137/297 (46%), Gaps = 34/297 (11%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D+ AF ++ LCR K ++ A + E + + D T N+ ++G C V +A +
Sbjct: 6 DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
K + + KC P +VTY V+ L K G+L A+ + + M EKG P + T +ID L
Sbjct: 66 KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKA 125
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK--NGSCLPN 398
R+ EA + +M GC P+ Y +LIK LCK + E Y E + + + +P+
Sbjct: 126 GRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPD 185
Query: 399 EITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
+T+ L+ L CK IL+ +D +E
Sbjct: 186 VVTYTSLIDGL-----------------CKAGR-----ILEARQVFD---------DEAV 214
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLK 515
++G PD +YT +I GL GR+E+ FHEMR +G P+ T + D +K K
Sbjct: 215 ERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAK 271
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 153/364 (42%), Gaps = 55/364 (15%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-- 240
PD+V + +++N ++EA V +R G D + + LC+ + V+
Sbjct: 5 PDMV---AFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDA 61
Query: 241 -------------------------------------VAETFFESEKNEFGYDIKTMNII 263
V E E + +KT ++
Sbjct: 62 FQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSP---TLKTYTVV 118
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++G G V EA+R + D++ + C PD+ Y + L K GK A L++ +
Sbjct: 119 IDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKH 178
Query: 324 K----PDVVTCNCIIDALCFKKRIPEALEVL-REMKNRGCLPNVTTYNSLIKHLCKIKRM 378
PDVVT +ID LC RI EA +V E RG +P+ TY S+I LCK+ R+
Sbjct: 179 HATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRV 238
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYN 435
E E EM +N P+ +T+ L+ K + +P V +M ++G +ST TYN
Sbjct: 239 EEGCERFHEM--RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYN 296
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+IL + T+ ME++G +Y+ ++ G +G + A+ F M +
Sbjct: 297 IILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR 356
Query: 496 GMVP 499
G P
Sbjct: 357 GCEP 360
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 52/325 (16%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E + P + + +I+D L + R E + F EM PD V TY L++ + A
Sbjct: 215 ERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAV---TYAALIDGFMKAK 271
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMN 261
M+ +A V+ + + G + + +L LC+ V E TF E+ + T +
Sbjct: 272 MIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYS 331
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA---------- 311
+++G+C GNV A ++ ++ CEP+ V+Y + L + GKL A
Sbjct: 332 ALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQR 391
Query: 312 --------------------------LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+ LF++M +G P++ + + ++D +C +
Sbjct: 392 RLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEV 451
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
ALE+ REM +RG P+V +N+LI+ LC R++ E E+E+++ P+ ++ L
Sbjct: 452 ALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA---PDAWSYWSL 508
Query: 406 LKSL---KKPEEVPWVLERMERNGC 427
L L ++ EE + M+ GC
Sbjct: 509 LDGLSRCERMEEARLLSFHMKLQGC 533
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 177/404 (43%), Gaps = 56/404 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P F +++ L R R VE + + D M + N+ TYG +++ A+ +
Sbjct: 180 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNL 239
Query: 211 FDRRKEFGELDDLSAFQNLL---LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
+ +E + N + LW +H + F E ++ E DI T N ++NG+
Sbjct: 240 LRKMEEVSHIIPNVVIYNTIIDGLWK-DGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGF 298
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C+ G +A++ +++++ K PD VT++ +NA K+GK A L+ M + P
Sbjct: 299 CISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPST 358
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT + +ID C + R+ A + +GC P++ T+N+LI C+ KR++ + L E
Sbjct: 359 VTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 418
Query: 388 MEQ----------------------------------KNGSCLPNEITFNYLLKSL---K 410
M + +G C PN +T N LL L
Sbjct: 419 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVC-PNVVTCNTLLDGLCDNG 477
Query: 411 KPEEVPWVLERMER-----------NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
K ++ + + M++ NG + TYN+++ +N + +EEM
Sbjct: 478 KLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPH 537
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+G+ PD +Y+ MI GL + RL++A F M K P+ T
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVT 581
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 172/365 (47%), Gaps = 28/365 (7%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A+++ + +F E +++DEM P V TY +++ + + ++
Sbjct: 320 NPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTV---TYSSMIDGFCKQNRLDA 376
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN--IIL 264
A +F G D+ F L+ CR K V+ E E G T+ ++
Sbjct: 377 AEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH-EMTEAGLVANTITYTTLI 435
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK--- 321
+G+C +G++ A+ +++I S P+ VT T ++ L GKL AL +F+AM +
Sbjct: 436 HGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495
Query: 322 --------GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
G +PDV T N +I L + + EA E+ EM +RG +P+ TY+S+I LC
Sbjct: 496 IDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMS 430
K R++ + D M K+ S P+ +TFN L+ K V LE M + G
Sbjct: 556 KQSRLDEATQMFDSMGSKSFS--PDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVAD 613
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TY ++ + D D ++EM G+ PD + M+ GL+ K LE A++
Sbjct: 614 AITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLE 673
Query: 491 EMRLK 495
++++
Sbjct: 674 DLQMS 678
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 134/312 (42%), Gaps = 42/312 (13%)
Query: 225 AFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
+F L+ C + A TF + K F + T N +L+G CV + EA D+
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL----DL 173
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
C+P+ VT+ T +N L ++G++ A+ L M E G +P+ +T I+D +C
Sbjct: 174 FHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233
Query: 344 PEALEVLREMKNRG-CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK----------- 391
AL +LR+M+ +PNV YN++I L K R + EM++K
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293
Query: 392 --NGSCL--------------------PNEITFNYLLKSLKKPE---EVPWVLERMERNG 426
NG C+ P+ +TF+ L+ + K E + + M
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRS 353
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
ST TY+ ++ + + D H + KG PD ++ +I G R++D +
Sbjct: 354 IIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGI 413
Query: 487 SYFHEMRLKGMV 498
HEM G+V
Sbjct: 414 KLLHEMTEAGLV 425
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 28/226 (12%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
++ ++ + KL AL F + + G P VVT N ++ LC + RI EAL++
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL----- 405
+M C PNV T+ +L+ LC+ R+ LD M + PN+IT+ +
Sbjct: 175 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQ--PNQITYGTIVDGMC 228
Query: 406 --------LKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
L L+K EEV ++ + YN I+ + + EM
Sbjct: 229 KMGDTVSALNLLRKMEEVSHIIPNVV---------IYNTIIDGLWKDGRHSDAHNLFIEM 279
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++K + PD +Y MI+G GR DA EM + + P+ T
Sbjct: 280 QEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVT 325
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 122/313 (38%), Gaps = 51/313 (16%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+AA F +G SP FN ++ RA+R + I++ EM + + N TY
Sbjct: 375 DAAEHMFYLTPTKG-CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 433
Query: 194 LLNRY-------AAAHMVEEAI----------------GVFDRRKEFGELDDLSAFQ--- 227
L++ + AA +++E I G+ D K L+ A Q
Sbjct: 434 LIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 228 -------------------NLLL--WLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNG 266
N+L+ + K +E E + E D T + +++G
Sbjct: 494 MDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C + EA + + + PD VT+ T + K G + L LF M ++G D
Sbjct: 554 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVAD 613
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+T +I I AL++ +EM + G P+ T +++ L + +E L+
Sbjct: 614 AITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLE 673
Query: 387 EMEQKNGSCLPNE 399
+++ G L +E
Sbjct: 674 DLQMSVGYQLEDE 686
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 151/302 (50%), Gaps = 8/302 (2%)
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
AI +F + + G DL L+ C + + T + + GY + T+N ++
Sbjct: 29 AISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVL-GKILKLGYQPNTITLNTLM 87
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G C+ G V ++ F ++ + D V+YAT +N L K G+ +AL+L + + ++ +
Sbjct: 88 KGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTR 147
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+VV N IID LC K + EA ++ EM RG PNV TY++LI C ++ +
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGL 207
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
L+EM KN + PN T+ L+ +L K +E +L M + G K + +YN ++ Y
Sbjct: 208 LNEMILKNIN--PNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGY 265
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ + M +KG+ P+ SY +MI L R+++A++ E+ K MVP
Sbjct: 266 CLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNT 325
Query: 502 RT 503
T
Sbjct: 326 VT 327
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 172/355 (48%), Gaps = 15/355 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++N I+D L + + E ++ EM P+++ TY L+ + A + EA
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI---TYSTLIYGFCLAGQLMEA 204
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
G+ + ++ + L+ LC+ V+ A+ E ++ + N +++G
Sbjct: 205 FGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDG 264
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C++G V AK+ + +++ P+ +Y ++ L K ++ A+ L + + K P+
Sbjct: 265 YCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPN 324
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VT + +ID C RI AL++L+EM +RG +V TY SL+ LCK + ++
Sbjct: 325 TVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFM 384
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+M+++ PN+ T+ L+ L K + + + + GC+++ TYNV++
Sbjct: 385 KMKERGIQ--PNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCK 442
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D+ +ME+ G PD ++ ++I L++K + + A HEM K ++
Sbjct: 443 EGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 161/342 (47%), Gaps = 6/342 (1%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+G R ++L+++ ++ N Y +++ +V EA ++ G ++
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187
Query: 226 FQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ C + E E ++ T I+++ C G V EAK +
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K +P+ V+Y T ++ G++ A ++F M +KG P+V + N +ID LC KR+
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA+ +LRE+ ++ +PN TY+SLI CK+ R+ + + L EM + + +T+
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQP--ADVVTYTS 365
Query: 405 LLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
LL +L K + + + +M+ G + + TY ++ + ++ + KG
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKG 425
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +Y VMI GL +G L++AL+ +M G +P+ T
Sbjct: 426 CRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVT 467
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 121/254 (47%), Gaps = 13/254 (5%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P + + V +L K TA+ LF+ M KG +PD+ T N +I+ C ++ + V
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
L ++ G PN T N+L+K LC ++ + D++ + +++++ LL L
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQM--DQVSYATLLNGL 125
Query: 410 KKPEEVPWVLE--RM-ERNGCKMSTDTYNVILKLYVNWDCEDKVRH----TWEEMEKKGM 462
K E L+ RM E + + YN I ++ C+DK+ + + EM+ +G+
Sbjct: 126 CKIGETRSALKLLRMIEDRSTRPNVVMYNTI----IDGLCKDKLVNEAYDLYSEMDARGI 181
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
P+ +Y+ +I+G G+L +A +EM LK + P T ++ D K + E
Sbjct: 182 FPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKN 241
Query: 523 KVIKLTSLGLKGNA 536
+ +T G+K N
Sbjct: 242 LLAVMTKEGVKPNV 255
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 117/258 (45%), Gaps = 5/258 (1%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILD---VLGRARRFVELIQVFDEMPDLVNEKTYGILL 195
A +++EG P +N ++D ++G + ++ + N +Y I++
Sbjct: 239 AKNLLAVMTKEG-VKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMI 297
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFG 254
+R + V+EA+ + + + + +L+ C+ + A + E
Sbjct: 298 DRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQP 357
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ T +L+ C N+ +A + + + +P+ TY ++ L K G+ A +L
Sbjct: 358 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKL 417
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
FQ + KG + +V T N +I LC + + EAL + +M+ GC+P+ T+ +I+ L +
Sbjct: 418 FQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFE 477
Query: 375 IKRMETVYEYLDEMEQKN 392
+ + + L EM K+
Sbjct: 478 KDQNDKAEKLLHEMIAKD 495
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 159/349 (45%), Gaps = 14/349 (4%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT--YGILLNRYAAAHMVEEAIGVFDR 213
S N L VL R E I++ + M L L+ + A+ EA R
Sbjct: 56 SAASNDRLRVLVRRGDLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEA-----R 110
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
R D+ ++ ++ C ++ A + E D T N ++ G C G
Sbjct: 111 RVLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME--PDTYTYNTLIRGLCGRGRT 168
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
A D+++ C PD VTY + A K+ A++L M +KG PD+VT N +
Sbjct: 169 DNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVV 228
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
++ +C + R+ +A+E L+ + + GC PN +YN ++K LC +R E + + EM +K
Sbjct: 229 VNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGR 288
Query: 394 SCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
PN +TFN L+ L + E +L+++ + GC ++ +YN IL + D+
Sbjct: 289 P--PNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRA 346
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
E M G PD SY ++ L G ++ A+ H+++ KG P
Sbjct: 347 MAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTP 395
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 190/407 (46%), Gaps = 30/407 (7%)
Query: 122 DDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE 181
+ LI + R R D A + R G P + +L+ + + + +++ DE
Sbjct: 156 NTLIRGLCGRGRTDN--ALAVLDDMLRRG-CVPDVVTYTILLEATCKRSGYKQAVKLLDE 212
Query: 182 M------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
M PD+V TY +++N V++A+ +G + ++ +L LC
Sbjct: 213 MRDKGCAPDIV---TYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCT 269
Query: 236 YKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ E AE E + ++ T N++++ C G V A I K C P+S++
Sbjct: 270 AERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLS 329
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y ++A K+ K+ A+ + M G PD+V+ N ++ ALC + A+E+L ++K
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KK 411
++GC P + +YN++I L K + E E L+EM K P+ IT++ + L +
Sbjct: 390 DKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQ--PDIITYSTISSGLCREGR 447
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT----WEEMEKKGMGPDQR 467
EE +++ G + +T YN IL C+ + H+ + M G P++
Sbjct: 448 IEEAIKAFCKVQDMGIRPNTVLYNAILL----GLCKRRATHSAIDLFTYMVSNGCMPNES 503
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKL 514
+YT++I GL +G +++A E+ +G+V + LVN I+L
Sbjct: 504 TYTILIEGLAYEGLVKEAREMMAELCSRGVV----SKTLVNKGAIRL 546
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 128/248 (51%), Gaps = 8/248 (3%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ + N ++ G+CV G + A+R + EPD+ TY T + L +G+ AL +
Sbjct: 119 DVMSYNAMVAGYCVTGQLDNARRL---VAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVL 175
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M +G PDVVT +++A C + +A+++L EM+++GC P++ TYN ++ +C+
Sbjct: 176 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQE 235
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
R++ E+L + C PN +++N +LK L ++ E+ ++ M R G +
Sbjct: 236 GRVDDAMEFLKSLPSYG--CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVV 293
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
T+N+++ + +++ K G P+ SY ++H + +++ A+++ M
Sbjct: 294 TFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 353
Query: 493 RLKGMVPE 500
G P+
Sbjct: 354 VSSGCYPD 361
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 173/368 (47%), Gaps = 17/368 (4%)
Query: 145 WVSR--EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLN 196
W+ + E D P ++ I+D L + R E + +F M P +V TY L+
Sbjct: 231 WMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVV---TYNSLIY 287
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGY 255
+ ++A +F E+ D+ F L+ LC+ V E F + +
Sbjct: 288 GMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEP 347
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
DI T + +++G C E+ +++ PD VT++ +V+ KKG + A +
Sbjct: 348 DIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSII 407
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M E+G +P+VVT N ++D C ++ EA +V M N+GC P+V +YN LIK CK
Sbjct: 408 NLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKS 467
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
+R++ + DEM K + PN IT L+ L +P + ++M +GC
Sbjct: 468 ERIDEAKQLFDEMSHKGLT--PNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLI 525
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY+ +L + D+ +E ++K + P+ +++ G+ G+LEDA F +
Sbjct: 526 TYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585
Query: 493 RLKGMVPE 500
++ + P+
Sbjct: 586 SIEELQPD 593
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 174/411 (42%), Gaps = 45/411 (10%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTY 191
+++ A +F + + P FN +L L R + + ++ ++ +M + T
Sbjct: 84 NFDDALAYFNQMVHMNPF-PCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTL 142
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAETFFESEK 250
IL+N H+V V + + G + F L+ LC + VE E
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMS 202
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK------ 304
+ + T +I+NG C +G A + K +++ CEP+ V+Y+ +++L K
Sbjct: 203 RGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNE 262
Query: 305 -----------------------------KGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
G+ A LF+ M E KPDVVT + ++D
Sbjct: 263 AVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVD 322
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
ALC + + EAL V +M P++ TY+SLI +CK + L+EM +N
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIR- 381
Query: 396 LPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+ +TF+ + K E ++ M G + + TYN ++ Y D+ R
Sbjct: 382 -PDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARK 440
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ M KG PD SY ++I G R+++A F EM KG+ P T
Sbjct: 441 VFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSIT 491
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 141 TFFKWVS---REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNR 197
TF WV ++G S ++ N +++ R R P++V TY L++
Sbjct: 386 TFSIWVDVFCKKGMVSEAQSIINLMIE---RGLR-----------PNVV---TYNSLMDG 428
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYD 256
Y ++EA VFD G D+ ++ L+ C+ + ++ A+ F E +
Sbjct: 429 YCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPN 488
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
T +++G C G Y AK +K + C PD +TY+T ++ K G L AL LF+
Sbjct: 489 SITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFE 548
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
A+ + KP+ V C ++ +C ++ +A E+ + P+V
Sbjct: 549 ALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 103/244 (42%), Gaps = 4/244 (1%)
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
N +A ++ ++ P + + AL + + + +++ M G V T
Sbjct: 82 FSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYT 141
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+I+ LC + VL ++ G P++ T+N+LI LC R+ E LD +
Sbjct: 142 LTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIM 201
Query: 390 QKN--GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ + + + N L K K + W +++M C+ +Y++I+
Sbjct: 202 SRGYQPTVYTHTMIVNGLCKIGKTSAAIVW-MKKMVELDCEPEVVSYSIIIDSLCKNRLV 260
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GIL 506
++ + M G+ P +Y +I+G+ + G+ + A F EM M P+ T IL
Sbjct: 261 NEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSIL 320
Query: 507 VNDM 510
V+ +
Sbjct: 321 VDAL 324
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 179/386 (46%), Gaps = 13/386 (3%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
L + I+N R + +A + F + + R PGSN FN +L +L ++ F + +V
Sbjct: 95 VLIHEAIINAHVRSQLPEQALFYFNQMIGR--GLVPGSNTFNNLLILLIKSNFFEKAWRV 152
Query: 179 FDEMPDLVNEKTY--GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
F+E V Y GI++ +++ V + +E G ++ + L+ C+
Sbjct: 153 FNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 212
Query: 237 KHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
+E + F++ + + + T +++NG+ +G + ++ + + P+ TY
Sbjct: 213 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 272
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+ + GKL A LF M E+G +VVT N +I LC ++R+ EA ++ MK
Sbjct: 273 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 332
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKP 412
G PN+ +YN+LI C I ++ ++M+ S P+ T+N L+ K
Sbjct: 333 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQS--PSLATYNILIAGFSEAKNS 390
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
V ++ ME G S TY +++ V D +K + MEK G+ D Y V+
Sbjct: 391 AGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVL 450
Query: 473 IHGLYDKGRLEDALSYFH---EMRLK 495
IHGL G +++A F EM LK
Sbjct: 451 IHGLCVVGDMKEASKLFKSLDEMHLK 476
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 153/344 (44%), Gaps = 12/344 (3%)
Query: 172 FVELIQV-FDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
F EL Q D P L++E ++N + + + E+A+ F++ G + + F N
Sbjct: 80 FHELTQPHLDSFPTHVLIHEA----IINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNN 135
Query: 229 LLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
LL+ L + E A F K D+ + I++ G C +G + + + +
Sbjct: 136 LLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGL 195
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
P+ V Y T ++ K G + +LF M E + T +I+ + +E
Sbjct: 196 SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIE 255
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ +MK G +PNV TYNS+I C ++ +E DEM ++ +C N +T+N L+
Sbjct: 256 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC--NVVTYNTLIGG 313
Query: 409 L---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L ++ E ++ RM+R+G + +YN ++ Y + DK + +M+ G P
Sbjct: 314 LCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPS 373
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
+Y ++I G + EM +G+ P T ++ D
Sbjct: 374 LATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMD 417
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 19/234 (8%)
Query: 148 REGDYSPGSNVFNAILDV------LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAA 201
R+G SP +N ++D L +A ++ + P L TY IL+ ++ A
Sbjct: 332 RDG-LSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLA---TYNILIAGFSEA 387
Query: 202 HMVEEAIGVFDRRKEFGELDDLS----AFQNLLLWLCRYKHVEVAETFFES-EKNEFGYD 256
+ + GV D +E E LS + L+ L R ++E A + S EK D
Sbjct: 388 ---KNSAGVTDMVREM-EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVAD 443
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
I ++++G CV+G++ EA + +K + + +P+ V Y T + K+G ALRL +
Sbjct: 444 IYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLK 503
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
M E G P+V + N I LC ++ EA +L++M G P+++ +N + K
Sbjct: 504 EMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISK 557
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 10/223 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N ++ L + RR +E ++ M P+L+ +Y L++ Y + +++A +F+
Sbjct: 307 YNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLI---SYNTLIDGYCSIGNLDKASSLFN 363
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
+ K G+ L+ + L+ K+ V + E E T I+++
Sbjct: 364 QMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSD 423
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
N+ +A + + + K+ D Y ++ L G + A +LF+++ E KP+ V N
Sbjct: 424 NIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYN 483
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+I C + AL +L+EM G +PNV +YNS I+ LCK
Sbjct: 484 TMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCK 526
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
+ + A + F + G SP +N ++ A+ + + EM P V
Sbjct: 354 NLDKASSLFNQMKSSGQ-SPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKV-- 410
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY IL++ + +E+A ++ ++ G + D+ + L+ LC ++ A F+S
Sbjct: 411 -TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKS 469
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
++ + N ++ G+C G+ Y A R K++ ++ P+ +Y + + L K K
Sbjct: 470 LDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEK 529
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
A L + M E G KP + N I A
Sbjct: 530 WTEAEVLLKDMIELGLKPSISIWNMISKA 558
>gi|147789025|emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
Length = 515
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 181/380 (47%), Gaps = 15/380 (3%)
Query: 120 LTDDLIVNVINRY---RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI 176
L++ + NV+ R + A+ FFK+ + ++ P S+ F L +L R R F +
Sbjct: 73 LSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTLHILTRMRYFDKAW 132
Query: 177 QVFDEM----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKE---FGELDDLSAFQNL 229
++ +E+ P L+ K+ I+L+R A E+ + F R ++ FG + F L
Sbjct: 133 ELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGANEFNVL 192
Query: 230 LLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
L C + ++ A + F + F + KTMNI+L G+ G+V + F+ ++I+ +
Sbjct: 193 LRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTAVELFYHEMIRRGFK 252
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P+SVTY ++A KKG G LRL + M + P + T +I + I A E+
Sbjct: 253 PNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRAREL 312
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
E+ R P++ YN+ + L + + +++ +DEME++ + +T++ + + L
Sbjct: 313 FNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIG--HDSMTYHTMFRGL 370
Query: 410 KKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
+ + V E +M R T T +++K + D W + +G P
Sbjct: 371 MRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPHG 430
Query: 467 RSYTVMIHGLYDKGRLEDAL 486
+ +++ GL G++++A+
Sbjct: 431 HALDLLVTGLCSHGKVKEAV 450
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 103/255 (40%), Gaps = 25/255 (9%)
Query: 261 NIILNGWCVLGNVYEAKRFWK-DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N++ + N ++A F+K + S+ P S + ++ LT+ +R F W
Sbjct: 80 NVLGRLFAAHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTLHILTR-------MRYFDKAW 132
Query: 320 E-----KGRKPDVVTC---NCIIDALCFKKRIPEALEVLREMKNR---GCLPNVTTYNSL 368
E + P ++T + ++ + + + LE M+ G +N L
Sbjct: 133 ELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGANEFNVL 192
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV---LERMERN 425
++ C ++M+ +M + PN T N LL K+ +V V M R
Sbjct: 193 LRAFCTQRQMKEARSVFHKMHSRFS---PNTKTMNILLLGFKESGDVTAVELFYHEMIRR 249
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G K ++ TYN+ + Y C EEMEK P + T +IHG + A
Sbjct: 250 GFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRA 309
Query: 486 LSYFHEMRLKGMVPE 500
F+E+ ++ + P+
Sbjct: 310 RELFNEISIRNLQPD 324
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 112/270 (41%), Gaps = 12/270 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D A F+ + R G + P S +N +D + F + +++ +EM P L
Sbjct: 235 DVTAVELFYHEMIRRG-FKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTL--- 290
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-E 247
+T L++ A + A +F+ D+ + + L R + V+ A E
Sbjct: 291 ETITTLIHGAGVAQNISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDE 350
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E+ G+D T + + G + + +I+ P + T + + +
Sbjct: 351 MEEEGIGHDSMTYHTMFRGLMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQ 410
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L +L L+ + ++G P + ++ LC ++ EA+E ++ RG + +
Sbjct: 411 LDLSLDLWGYLIDRGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRM 470
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
L ++L + E +++ LD+M +K + LP
Sbjct: 471 LERYLVEAGEGEMLWK-LDQMIKKLHTVLP 499
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 176/383 (45%), Gaps = 14/383 (3%)
Query: 128 VINRY--RFDWEAAY-TFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD 184
VIN + D + AY T+ + + R P +N+I+ L +A+ + ++V M
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDR--GILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVK 262
Query: 185 ---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+ N +TY +++ Y ++ +EAIG + G D+ + +L+ +LC+
Sbjct: 263 NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322
Query: 242 AETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A F+S K +I T +L G+ G + E ++++ P+ ++ +
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A K+GK+ A+ +F M ++G PD VT +I LC R+ +A+ +M + P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PW 417
YNSLI LC + + E + EM + G CL + I FN ++ S K V
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICL-DTIFFNSIIDSHCKEGRVIESEK 500
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ + M R G K + TY+ ++ Y D+ M GM PD +Y +I+G
Sbjct: 501 LFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Query: 478 DKGRLEDALSYFHEMRLKGMVPE 500
R+EDAL F EM G+ P+
Sbjct: 561 KISRMEDALVLFREMESSGVSPD 583
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 148/346 (42%), Gaps = 40/346 (11%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N TYGIL+ A ++ + G D AF LL LC K A
Sbjct: 90 NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149
Query: 247 ESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNAL 302
+ G ++ + NI+L G C EA + + C PD V+Y T +N
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K+G L A + M ++G P+VVT N II ALC + + +A+EVL M G +PN
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 363 TTYNSLIKHLCK----------IKRMET--------VYEYLDEMEQKNGSCLPNEITFNY 404
TYNS++ C +K+M + Y L + KNG C F+
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 405 LLKSLKKPE------------------EVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ K KPE E+ +L+ M RNG + +++++ Y
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
D+ + +M ++G+ PD +Y +I L GR+EDA+ YF +M
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 178/382 (46%), Gaps = 30/382 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P VF+ ++ + + + + VF +M PD V TYG ++ + VE+A
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV---TYGTVIGILCKSGRVEDA 428
Query: 208 IGVF----DRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNI 262
+ F D R G + + +L+ LC + + A E E D N
Sbjct: 429 MRYFEQMIDERLSPGNI----VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
I++ C G V E+++ + +++ +P+ +TY+T ++ GK+ A +L +M G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
KPD VT N +I+ C R+ +AL + REM++ G P++ TYN +++ L + +R
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 383 E-YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC----KMSTDTYNVI 437
E Y+ E L T+N +L L K L RM +N C ++ T T+N++
Sbjct: 605 ELYVGITESGTQLELS---TYNIILHGLCKNNLTDEAL-RMFQNLCLTDLQLETRTFNIM 660
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + D+ + + + G+ PD R+Y++M L ++G LE+ F M G
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720
Query: 498 VPEPRTGILVNDMNIKLKERGE 519
R ++N + KL +RG+
Sbjct: 721 TANSR---MLNSIVRKLLQRGD 739
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 4/218 (1%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE- 348
P+ TY + + G+L + +KG + D + ++ LC KR +A++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
VLR M GC+PNV +YN L+K LC R + E L M G C P+ +++ ++
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 409 LKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
K ++ M G + TYN I+ DK M K G+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
R+Y ++HG G+ ++A+ + +M G+ P+ T
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 168/375 (44%), Gaps = 14/375 (3%)
Query: 168 RARRFVELIQVF-----DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
R++ +EL+Q+ D PD+V +Y ++N + +++A G + + G L +
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVV---SYTTVINGFFKEGDLDKAYGTYHEMLDRGILPN 233
Query: 223 LSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ + +++ LC+ + ++ A E KN + +T N I++G+C G EA F K
Sbjct: 234 VVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+ EPD VTY + ++ L K G+ A ++F +M ++G KP++ T ++ K
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ E +L M G PN ++ LI K +++ +M Q+ + P+ +T
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN--PDTVT 411
Query: 402 FNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
+ ++ L K E+ E+M YN ++ +D DK + EM
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG 518
+G+ D + +I +GR+ ++ F M G+ P T + D +
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMD 531
Query: 519 EQGKKVIKLTSLGLK 533
E K + + S+G+K
Sbjct: 532 EATKLLASMVSVGMK 546
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 11/260 (4%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILL 195
F + R G P ++ ++D A + E ++ M PD V TY L+
Sbjct: 501 LFDLMVRIG-VKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV---TYNTLI 556
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFG 254
N Y +E+A+ +F + G D+ + +L L + + A E + ++
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T NIIL+G C EA R ++++ + + ++ T+ + AL K G+ A L
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F A+ G PDV T + + + L + + E ++ M+ GC N NS+++ L +
Sbjct: 677 FAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQ 736
Query: 375 IKRMETVYEYLDEMEQKNGS 394
+ YL +++K+ S
Sbjct: 737 RGDITRAGTYLFMIDEKHFS 756
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 172/361 (47%), Gaps = 20/361 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P N FN + L + R E ++ D M P N TYG+L++ V+EA
Sbjct: 303 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTP---NSFTYGVLMHGLCRMGKVDEA 359
Query: 208 IGVFDRRKEFGELDDLSAFQNLL-LWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILN 265
+ ++ ++ F L+ ++ R + E ES + G DI T N ++
Sbjct: 360 RMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 415
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G + A+ ++ CEP+ +TY ++ K+G+L A + M KG
Sbjct: 416 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 475
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ V NC+I ALC +++ +AL + +M ++GC P++ T+NSLI LCK+ + E
Sbjct: 476 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 535
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+M + + N IT+N L+ + + +E ++ M GC + TYN ++K
Sbjct: 536 QDMLLE--GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALC 593
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+K +E+M KG+ P+ S ++I+GL G ++ AL + +M +G+ P+
Sbjct: 594 RAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIV 653
Query: 503 T 503
T
Sbjct: 654 T 654
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 6/258 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + ++D + R E V DEM +N Y L++ V++A+ +
Sbjct: 440 PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNM 499
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
F G D+ F +L+ LC+ E A ++ E + T N +++ +
Sbjct: 500 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 559
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA + D++ C D +TY + AL + G + L LF+ M KG P+ ++
Sbjct: 560 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 619
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
CN +I+ LC I ALE LR+M +RG P++ TYNSLI LCK R + D++
Sbjct: 620 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL- 678
Query: 390 QKNGSCLPNEITFNYLLK 407
Q G C P+ IT+N L+
Sbjct: 679 QVEGIC-PDAITYNTLIS 695
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 165/373 (44%), Gaps = 15/373 (4%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKT 190
D + F+W + Y +V+ ++D LG A F + +M + E
Sbjct: 107 LDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESL 166
Query: 191 YGILLNRYAAAHMVEEAIGVF-DRRKEFGELDDLSAFQNLL-LWLCRYKHVEVAETFFES 248
+ +++ Y A + +A + D R + ++ +L + L V F+E
Sbjct: 167 FILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEM 226
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ T +++ C++ V A KD+ + C P+++ Y T ++AL+K G++
Sbjct: 227 LSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRV 286
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
L+L + M G PDV T N I LC RI EA +++ M RG PN TY L
Sbjct: 287 NEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVL 346
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVL-ERMER 424
+ LC++ +++ L+++ PN + FN L+ S + +E V+ E M
Sbjct: 347 MHGLCRMGKVDEARMLLNKVPN------PNVVLFNTLINGYVSRGRLDEAKAVMHESMLS 400
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
GC TYN ++ R EM+ KG P+ +YT++I +GRLE+
Sbjct: 401 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 460
Query: 485 ALSYFHEMRLKGM 497
A + EM KG+
Sbjct: 461 ARNVLDEMSGKGL 473
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 165/395 (41%), Gaps = 50/395 (12%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG--------RA 169
+ L + LI ++R R D A +S G ++F +LG A
Sbjct: 371 VVLFNTLINGYVSRGRLDEAKAVMHESMLS----VGCGPDIFTYNTLILGLCKKGYLVSA 426
Query: 170 RRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL 229
R + +Q+ P+++ TY IL++R+ +EEA V D G + + L
Sbjct: 427 RELMNEMQIKGCEPNVI---TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCL 483
Query: 230 LLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
+ LC+ + V+ A F + DI T N ++ G C + EA ++D++
Sbjct: 484 ISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 543
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
+++TY T ++A ++G + AL+L M +G D +T N +I ALC I + L
Sbjct: 544 IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLA 603
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ +M ++G PN + N LI LC+ ++ E+L +M + + P+ +T+N L+
Sbjct: 604 LFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT--PDIVTYNSLING 661
Query: 409 LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
L K L + +++++ +G+ PD +
Sbjct: 662 LCKTGRAQEAL--------------------------------NLFDKLQVEGICPDAIT 689
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
Y +I +G +DA G +P T
Sbjct: 690 YNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVT 724
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 118/243 (48%), Gaps = 7/243 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGI 193
+ A F +S +G P FN+++ L + +F E + ++ +M + N TY
Sbjct: 494 QDALNMFGDMSSKG-CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 552
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFG-ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
L++ + ++EA+ + + G LDD++ + L+ LCR ++E FE ++
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT-YNGLIKALCRAGNIEKGLALFEDMMSK 611
Query: 253 -FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ + NI++NG C GN+ A F +D+I PD VTY + +N L K G+ A
Sbjct: 612 GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEA 671
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L LF + +G PD +T N +I C + +A +L + G +PN T+ L+ +
Sbjct: 672 LNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSN 731
Query: 372 LCK 374
K
Sbjct: 732 FIK 734
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 154/337 (45%), Gaps = 14/337 (4%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
++ IL+ + + + A+ F + + G D+ F LL LC V A FF
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175
Query: 250 -KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ ++ T ++NG C G + EA +++ +P +TY T V+ + KKG
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 309 GTALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+AL L + M E P+VV + IID+LC R +A + EM+ +G P++ TYNS
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMER 424
+I C R + L EM ++ S P+ +T+N L+ + K E + + M
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKIS--PDVVTYNALINAFVKEGKFFEAAELYDEMLP 353
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G +T TYN ++ + D D + M KG PD ++T +I G R++D
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413
Query: 485 ALSYFHEMRLKGMVPEPRT-------GILVNDMNIKL 514
+ HEM +G+V T LV D+N L
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAAL 450
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 178/398 (44%), Gaps = 52/398 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P F +++ L R R VE + + D M + + TYG +++ A+ +
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241
Query: 211 FDRRKEFGEL-DDLSAFQNLLLWLCR-YKHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
+ +E + ++ + ++ LC+ +H + F E ++ D+ T N ++ G+C
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G +A++ +++++ K PD VTY +NA K+GK A L+ M +G P+ +
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 361
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N +ID C + R+ A ++ M +GC P+V T+ +LI C KR++ E L EM
Sbjct: 362 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 421
Query: 389 EQK-------------NGSCL--------------------PNEITFNYLLKSL---KKP 412
++ +G CL P+ +T N LL L K
Sbjct: 422 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 481
Query: 413 EEVPWVLERMER-----------NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
++ + + M++ NG + TYN+++ +N + +EEM +G
Sbjct: 482 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 541
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ PD +Y+ MI GL + RL++A F M K P
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 579
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 167/361 (46%), Gaps = 20/361 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP +NA+++ + +F E +++DEM + N TY +++ + ++ A
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 381
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+F G D+ F L+ C K ++ E E + + T N +++G+C
Sbjct: 382 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 441
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK------- 321
++G++ A + +I S PD VT T ++ L GKL AL +F+AM +
Sbjct: 442 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 501
Query: 322 ----GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
G +PDV+T N +I L + + EA E+ EM +RG +P+ TY+S+I LCK R
Sbjct: 502 HPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTY 434
++ + M K+ S PN +TFN L+ K V LE M R G Y
Sbjct: 562 LDEATQMFVSMGSKSFS--PNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIY 619
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++ + + ++EM G+ PD + M+ G + K LE A++ ++++
Sbjct: 620 ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQM 679
Query: 495 K 495
Sbjct: 680 S 680
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 142/304 (46%), Gaps = 5/304 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+E+AI +F L + F L+ + R + ++ + ++ E+ + DI + NI
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ +C + A + I K PD VT+ T ++ L + ++ AL F M+E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+P+VVT +++ LC + RI EA+ +L M G P TY +++ +CK +
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
L +ME+ + +PN + ++ ++ SL K + + M+ G TYN ++
Sbjct: 240 NLLRKMEEVS-HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + +EM ++ + PD +Y +I+ +G+ +A + EM +G++P
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 358
Query: 500 EPRT 503
T
Sbjct: 359 NTIT 362
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 18/302 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+AA F ++ +G SP F ++D A+R + +++ EMP + N TY
Sbjct: 377 DAAEDMFYLMATKG-CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK--- 250
L++ + + A+ + + G D+ LL LC ++ A F++ +
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495
Query: 251 ---------NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
N D+ T NI++ G G EA+ ++++ PD++TY++ ++
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K+ +L A ++F +M K P+VVT N +I+ C R+ + LE+ EM RG + +
Sbjct: 556 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 615
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER 421
Y +LI K+ + + EM + P+ IT +L EE+ +
Sbjct: 616 AIIYITLIYGFRKVGNINGALDIFQEM--ISSGVYPDTITIRNMLTGFWSKEELERAVAM 673
Query: 422 ME 423
+E
Sbjct: 674 LE 675
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 7/257 (2%)
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E E G+ +++ + +G+ + + +A + D+++S+ P V + + + + +
Sbjct: 36 GESCEAGFGGESLKL-QSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMER 94
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ L+Q M K + D+ + N +I C ++P AL ++ G P+V T+ +
Sbjct: 95 PDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTT 154
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMER 424
L+ LC R+ ++ +M + +C PN +TF L+ L + E +L+RM
Sbjct: 155 LLHGLCVEDRVSEALDFFHQMFET--TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLE 483
+G + + TY I+ + +ME+ + P+ Y+ +I L GR
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 484 DALSYFHEMRLKGMVPE 500
DA + F EM+ KG+ P+
Sbjct: 273 DAQNLFTEMQEKGIFPD 289
>gi|225460540|ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
[Vitis vinifera]
gi|296081020|emb|CBI18524.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 181/380 (47%), Gaps = 15/380 (3%)
Query: 120 LTDDLIVNVINRY---RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI 176
L++ + NV+ R + A+ FFK+ + ++ P S+ F L +L R R F +
Sbjct: 73 LSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTLHILTRMRYFDKAW 132
Query: 177 QVFDEM----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKE---FGELDDLSAFQNL 229
++ +E+ P L+ K+ I+L+R A E+ + F R ++ FG + F L
Sbjct: 133 ELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGANEFNVL 192
Query: 230 LLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
L C + ++ A + F + F + KTMNI+L G+ G+V + F+ ++I+ +
Sbjct: 193 LRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTAVELFYHEMIRRGFK 252
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P+SVTY ++A KKG G LRL + M + P + T +I + I A E+
Sbjct: 253 PNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRAREL 312
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
E+ R P++ YN+ + L + + +++ +DEME++ + +T++ + + L
Sbjct: 313 FNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIG--HDSMTYHTMFRGL 370
Query: 410 KKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
+ + V E +M R T T +++K + D W + +G P
Sbjct: 371 MRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPHG 430
Query: 467 RSYTVMIHGLYDKGRLEDAL 486
+ +++ GL G++++A+
Sbjct: 431 HALDLLVTGLCSHGKVKEAV 450
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 103/255 (40%), Gaps = 25/255 (9%)
Query: 261 NIILNGWCVLGNVYEAKRFWK-DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N++ + N ++A F+K + S+ P S + ++ LT+ +R F W
Sbjct: 80 NVLGRLFAAHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTLHILTR-------MRYFDKAW 132
Query: 320 E-----KGRKPDVVTC---NCIIDALCFKKRIPEALEVLREMKNR---GCLPNVTTYNSL 368
E + P ++T + ++ + + + LE M+ G +N L
Sbjct: 133 ELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGANEFNVL 192
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV---LERMERN 425
++ C ++M+ +M + PN T N LL K+ +V V M R
Sbjct: 193 LRAFCTQRQMKEARSVFHKMHSRFS---PNTKTMNILLLGFKESGDVTAVELFYHEMIRR 249
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G K ++ TYN+ + Y C EEMEK P + T +IHG + A
Sbjct: 250 GFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRA 309
Query: 486 LSYFHEMRLKGMVPE 500
F+E+ ++ + P+
Sbjct: 310 RELFNEISIRNLQPD 324
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 112/270 (41%), Gaps = 12/270 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D A F+ + R G + P S +N +D + F + +++ +EM P L
Sbjct: 235 DVTAVELFYHEMIRRG-FKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTL--- 290
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-E 247
+T L++ A + A +F+ D+ + + L R + V+ A E
Sbjct: 291 ETITTLIHGAGVAQNISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDE 350
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E+ G+D T + + G + + +I+ P + T + + +
Sbjct: 351 MEEEGIGHDSMTYHTMFRGLMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQ 410
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L +L L+ + ++G P + ++ LC ++ EA+E ++ RG + +
Sbjct: 411 LDLSLDLWGYLIDRGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRM 470
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
L ++L + E +++ LD+M +K + LP
Sbjct: 471 LERYLVEAGEGEMLWK-LDQMIKKLHTVLP 499
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 143/310 (46%), Gaps = 9/310 (2%)
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA----ETFFESEK 250
+ Y + A +F + K +L LL L RY E F ++ K
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIK 201
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
++ T NI++ G+C+ +A F + K C PD+VTY T ++AL KKG+LG
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGD 261
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L M +G P+ T N ++ C + EA V+ M LP+V TYN LI
Sbjct: 262 ARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLIN 321
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGC 427
LC R+E ++ DEME N LP+ +++N L+ K E +LE M G
Sbjct: 322 GLCNEGRIEEAFKLRDEME--NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
K + T+N+++K Y D +T +ME+ G PD +Y +I+G G + +A
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFR 439
Query: 488 YFHEMRLKGM 497
EM K M
Sbjct: 440 TMDEMGRKNM 449
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 172/427 (40%), Gaps = 87/427 (20%)
Query: 154 PGSNVFNAI------LDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P N +N + + L A +EL+ + +PD+ TY +L+N +EEA
Sbjct: 276 PNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW---TYNMLINGLCNEGRIEEA 332
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+ D + L D+ ++ L+ + + A E E +E G + T NI++
Sbjct: 333 FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE-EMSEKGVKPNAVTHNIMVK 391
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+C G + +A + +S PD VTY T +N K G +G A R M K K
Sbjct: 392 WYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKM 451
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLR---------------------------------- 351
D VT N I+ LC +K++ EA ++L
Sbjct: 452 DSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLW 511
Query: 352 -EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
EMK + +P+ TYN +I LC+ + E L+E+ + LP+E T+N +L
Sbjct: 512 DEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE--SGLLPDETTYNTILHGYC 569
Query: 411 KPEEVPWVLE---RMERNGCKMSTDTYNVI-------------LKLYVNWDCEDKVRHT- 453
+ +V + +M N K T N++ LKL+ W + K T
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTV 629
Query: 454 ---------------------WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
EME+K +GPD +Y +I L D GR+ +A + +M
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 493 RLKGMVP 499
KG +P
Sbjct: 690 LEKGXLP 696
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 128/267 (47%), Gaps = 12/267 (4%)
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
++ + D IK P+ T+ + + K A+ M + PD VT N I+D
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
ALC K R+ +A ++L +MK+RG LPN TYN L+ CK+ ++ ++ M Q N
Sbjct: 252 ALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN--L 309
Query: 396 LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
LP+ T+N L+ L + EE + + ME +YN ++ + W +
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN--- 508
EEM +KG+ P+ ++ +M+ +G+++DA + +M G P+ T L+N
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429
Query: 509 ---DMNIKLKERGEQGKKVIKLTSLGL 532
+M + E G+K +K+ S+ L
Sbjct: 430 KAGNMGEAFRTMDEMGRKNMKMDSVTL 456
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 160/369 (43%), Gaps = 15/369 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E +SP +N +++ +A E + DEM ++ T +L +E
Sbjct: 411 ESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE 470
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIIL 264
EA + ++ G D ++ L++ + +V+ A + E ++ E T N I+
Sbjct: 471 EAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCII 530
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G C G +A ++++S PD TY T ++ ++G + A + M E K
Sbjct: 531 GGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK 590
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDV TCN ++ LC + + +AL++ ++G + TYN+LI LCK R++ +
Sbjct: 591 PDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNL 650
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
L EME+K P+ T+N ++ +L + E M + K +L+L
Sbjct: 651 LSEMEEKELG--PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQ--VLQL---- 702
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTG 504
D + +Y+ I L +G+ +DA+ F E + KG+ + T
Sbjct: 703 ---DXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTY 759
Query: 505 ILVNDMNIK 513
I + D IK
Sbjct: 760 INLMDGLIK 768
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 8/250 (3%)
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK---KGKLGTALRLFQ 316
++ + + G + A + +K + + + P+ +T T +N+L + + + F
Sbjct: 138 LDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFN 197
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
+ G P+V T N +I C + + +A+E L M C P+ TYN+++ LCK
Sbjct: 198 DAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKG 257
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT 433
R+ + L M+ K+ LPN T+N L+ K +E V+E M +N T
Sbjct: 258 RLGDARDLL--MDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWT 315
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
YN+++ N ++ +EME + PD SY +I+G + ++ +A EM
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375
Query: 494 LKGMVPEPRT 503
KG+ P T
Sbjct: 376 EKGVKPNAVT 385
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 110/220 (50%), Gaps = 14/220 (6%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P T + A + G+ A ++F+ M +P+++TCN ++++L R P + V
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLV---RYPSSHSV 189
Query: 350 L--REMKNR----GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
RE N G +PNV T+N +I C + + E+L+ M + N C P+ +T+N
Sbjct: 190 SFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYN--CSPDNVTYN 247
Query: 404 YLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
+L +L K + +L M+ G + +TYN+++ Y + + E M +
Sbjct: 248 TILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQN 307
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ PD +Y ++I+GL ++GR+E+A EM ++P+
Sbjct: 308 NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPD 347
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 173/365 (47%), Gaps = 15/365 (4%)
Query: 139 AYTFFKWV--SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
A FF V S D P ++ A++D+L + F + DEM + ++ +
Sbjct: 128 AVAFFHHVLPSLPPDSLPA--LYAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILA 185
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGE-LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
L+ RY A M EA +F R +E+G D + +LL L + + A+ F+S K+
Sbjct: 186 LIRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSV 245
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
F D+ +++ WC G + EA+R + ++ ++ P+ TY ++A+ + G++ A
Sbjct: 246 FTPDVVLYTTLVHAWCRSGRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQ 305
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L M + G P+ T N I+ A R + L+V +M+ GC P++ TYN L++
Sbjct: 306 ELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETH 365
Query: 373 CKIKR--METVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGC 427
C + ++ + L M K C+P+ TFN +LK L + ERM+ C
Sbjct: 366 CGKGQSNLDAAMKMLTRMIAKG--CIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQC 423
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
K + TYN++++L+ D V +M+ +G+ P+ +Y +I +G + A
Sbjct: 424 KPNVVTYNLLMRLFNLEKSMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHM 483
Query: 488 YFHEM 492
EM
Sbjct: 484 TLREM 488
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 112/248 (45%), Gaps = 10/248 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
++ +P + A++D + RA + ++ +M D N T+ ++ + A
Sbjct: 277 QQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRS 336
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCR--YKHVEVAETFFESEKNEFGY-DIKTMN 261
E+ + V ++ ++ G D+ + L+ C +++ A + D T N
Sbjct: 337 EQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFN 396
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+L VLGNV A++ ++ + + +C+P+ VTY + + + LR+ + M +
Sbjct: 397 PMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKRDMDAQ 456
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL-PNVTTYN---SLIKHLCKIKR 377
G +P+V T +I+A C + A LREM L P Y+ +L++ +++R
Sbjct: 457 GVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRKAGQLRR 516
Query: 378 METVYEYL 385
E + E +
Sbjct: 517 HEELVEMM 524
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 76/195 (38%), Gaps = 4/195 (2%)
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+ID L P A +L EM+ R + +LI+ + + + ME+
Sbjct: 150 AMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRMEEY 209
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDT--YNVILKLYVNWDCEDK 449
G+ P+ T LL +L K + + D Y ++ + D+
Sbjct: 210 -GAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCRSGRLDE 268
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
+ EM++ G+ P+ +YT +I +Y G++ A +M G P T +
Sbjct: 269 AERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMR 328
Query: 510 MNIKLKERGEQGKKV 524
++K R EQ +V
Sbjct: 329 AHVK-AGRSEQVLQV 342
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 182/399 (45%), Gaps = 27/399 (6%)
Query: 114 NQCELTLTD-DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF 172
+Q +TD L + V++ R A FF+WV + D+ VF AILD+L
Sbjct: 76 DQFGAVITDPHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLM 135
Query: 173 VELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
V M +V+ + +G++ + A H+ + VFD+ G L D+ +L
Sbjct: 136 HAAYWV---MERVVSFEMHGVV-DVLIAGHV--XCLLVFDKMIRNGLLPDVKNCNRIL-- 187
Query: 233 LCRYKHVEVAETFFESEKNEFG----YDIK----TMNIILNGWCVLGNVYEAKRFWKDII 284
V E KN +G + IK T N +L+ +C G V +A ++
Sbjct: 188 -----RVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQ 242
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+ C P+ VTY VN L+KKG+L A L + M G T N +I+ C K
Sbjct: 243 ERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFV 302
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA +++ EM NR P ++TYN+L+ LCK ++ V +M + + P+ ++FN
Sbjct: 303 EAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFT--PDIVSFNS 360
Query: 405 LLKSLKKPEEVPWVLERMERNGCK---MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
LL + + + C+ + TYN ++ W D +EM +G
Sbjct: 361 LLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQG 420
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ PD +YT++++G + G + A +F+EM KG+ P+
Sbjct: 421 LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPD 459
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 171/391 (43%), Gaps = 34/391 (8%)
Query: 123 DLIVNVINRYRFDWEAAYT-----FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
DL+ ++NR F + Y KWV V G RF ++++
Sbjct: 306 DLVEEMVNRRAFPTLSTYNTLMYGLCKWVQ-----------------VTGVRLRFSDMLK 348
Query: 178 VFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
PD+V ++ LL Y + EA +FD K + + + L+ LC +
Sbjct: 349 S-KFTPDIV---SFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404
Query: 238 HVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
+++ A + E + G DI T I++NG LG V A+ F+ +++ +PD Y
Sbjct: 405 YLDAALRL-KKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
T + K A + + M G PDV+T N + ALC + EA ++L M +
Sbjct: 464 NTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVS 523
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
G +P+ TY S+I K + E +EM K + P+ +T+ L+ + + +
Sbjct: 524 DGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVA--PSVVTYTVLIHAHAAKQML 581
Query: 416 PWV---LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+M + TYN I+ D+ ++EME+KG+ P++ SYT++
Sbjct: 582 DLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTIL 641
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
I+ + G E+AL + EM + + P+ T
Sbjct: 642 INESCNMGYWEEALRLYREMLDRKIQPDSFT 672
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 106/272 (38%), Gaps = 41/272 (15%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+ TY IL+N V A G F+ G D A+ ++ + VA
Sbjct: 423 PDIF---TYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVA 479
Query: 243 ETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ E F D+ T N+ ++ C GN EA ++++ PD VTY + +N
Sbjct: 480 FSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIING 539
Query: 302 LTKKGKLGTALRLFQAMWEKGRKP-----------------------------------D 326
K G L A +F M KG P +
Sbjct: 540 FVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPAN 599
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V+T N II+ LC +R+ EA + EM+ +G LPN +Y LI C + E
Sbjct: 600 VITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYR 659
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV 418
EM + P+ T + LK+L + +V V
Sbjct: 660 EMLDRKIQ--PDSFTHSVFLKNLHRDYQVHAV 689
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
V ++M RNG N IL++ + + K ++ + ME+ G+ P +Y M+
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERG--EQGKKVIK 526
+GR++ AL EM+ +G P T +LVN L ++G EQ K +I+
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNG----LSKKGELEQAKGLIE 274
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 153/323 (47%), Gaps = 9/323 (2%)
Query: 182 MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
MP N+ TYGIL+ +++A ++ AI + + K G + L+ LC V
Sbjct: 6 MP---NKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVE 62
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
A F + + D+ T +++ C G EA+ +++I C PD+VT++T ++
Sbjct: 63 ALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDG 122
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK-KRIPEALEVLREMKNRGCLP 360
L K G A R+ + + ++G II LC K + A +VL + +G P
Sbjct: 123 LCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTP 182
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPW 417
V +N +I CK K +++ Y+ L+ M +K C+PN TF L+ L K E
Sbjct: 183 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKG--CVPNVFTFTILITGLCKANRVGEAQQ 240
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+LE+M GC + TY+ ++ D ++ ME++ P+ ++ ++I GL
Sbjct: 241 LLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLC 300
Query: 478 DKGRLEDALSYFHEMRLKGMVPE 500
R+E+A +H MR G P+
Sbjct: 301 KAKRIEEARQLYHRMRETGCAPD 323
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 174/392 (44%), Gaps = 50/392 (12%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
D +P + A++ L +A +F E + EM PD V T+ L++
Sbjct: 73 DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTV---TFSTLIDGLCKFGSE 129
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAE-------------------- 243
E+A V + + G + +AF+ ++ LC +Y VE+A
Sbjct: 130 EQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNL 189
Query: 244 ---TFFESEKNEFGY-------------DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
F +++ + Y ++ T I++ G C V EA++ + ++
Sbjct: 190 VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGG 249
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
C P+ VTY+T +N L K+G++ A LFQ M + P+VVT N +ID LC KRI EA
Sbjct: 250 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 309
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL- 406
++ M+ GC P++ TYNSLI LCK +++ ++ + + +G N +T++ L
Sbjct: 310 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPE-SGVSAANAVTYSTLFH 368
Query: 407 --KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
+L + + + + G TY ++ Y +V EEM KG P
Sbjct: 369 GYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 428
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ + ++ GL++ E A+ F M +G
Sbjct: 429 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARG 460
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 157/363 (43%), Gaps = 9/363 (2%)
Query: 150 GDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
G SP ++ +++ L G+ EL Q+ + N T+ IL++ A +EE
Sbjct: 248 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 307
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIIL 264
A ++ R +E G D+ + +L+ LC+ V+ A F++ E + T + +
Sbjct: 308 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 367
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G+ LG + +A R + ++ PD TY + + K + + L + M KG
Sbjct: 368 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 427
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P V T + ++ L A+++ M RGC + YN +++ + + +
Sbjct: 428 PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAV 487
Query: 385 LDE-MEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
L++ +++++ P+ + L++SL + ++ +L +M G + +YN +L
Sbjct: 488 LEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSG 547
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D+ +E M G P+ + V+I L +++DA M G P+
Sbjct: 548 LSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPD 607
Query: 501 PRT 503
T
Sbjct: 608 IET 610
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 152/336 (45%), Gaps = 13/336 (3%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD----LVNEKTYGILLNRYAAAHM 203
RE +P +N+++D L ++ + E Q+F +P+ N TY L + YAA
Sbjct: 316 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 375
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNI 262
+ +A +F + G DL+ + +L+L C+ E ++ F + T++
Sbjct: 376 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 435
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK- 321
+L G + A + + + C D++ Y V + + K AL + + + +K
Sbjct: 436 VLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKR 495
Query: 322 GRK--PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
RK P + ++++LC R +A ++L +M RG V++YN L+ L +++R +
Sbjct: 496 DRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWD 555
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNV 436
+ + M + P T N ++ S K ++ +++RM + GC +T N
Sbjct: 556 EATQVFEAMVSAGPA--PEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNT 613
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
++ Y D R EEM + G+ P+ ++ ++
Sbjct: 614 LIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 7/252 (2%)
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
C P+ TY + + G L A++L + M G + + V ++ LC R+ EAL
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
E R M + C P+V TY +L+ LCK + + L EM + C P+ +TF+ L+
Sbjct: 65 EHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARG--CAPDTVTFSTLID 121
Query: 408 SLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVN-WDCEDKVRHTWEEMEKKGMG 463
L K E+ VLE + + G S + I++ N ++ + + KG
Sbjct: 122 GLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFT 181
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKK 523
P + ++I+G L+ A M KG VP T ++ K GE +
Sbjct: 182 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQL 241
Query: 524 VIKLTSLGLKGN 535
+ K+ + G N
Sbjct: 242 LEKMVTGGCSPN 253
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 4/144 (2%)
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
R C+PN TY LI+ ++ + L+EM K+ N + L+K L V
Sbjct: 3 RICMPNKFTYGILIRGFSSAGDLDIAIQLLEEM--KSNGFEGNAVVHTTLMKGLCDAGRV 60
Query: 416 PWVLE--RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
LE R C TY ++ D+ + EM +G PD +++ +I
Sbjct: 61 VEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLI 120
Query: 474 HGLYDKGRLEDALSYFHEMRLKGM 497
GL G E A ++ +GM
Sbjct: 121 DGLCKFGSEEQAFRVLEDVIQRGM 144
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 183/383 (47%), Gaps = 24/383 (6%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP 183
L ++++ R++ ++ A T + ++ GS++F + D V++
Sbjct: 94 LSLHILTRFKL-YKTAQTLAQELALSASDPSGSSIFQCLKDSY----------HVYNS-- 140
Query: 184 DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK---HVE 240
+ + +++ Y+ +M+++A+ + K G + + ++ ++L + R + +
Sbjct: 141 ---SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLS 197
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
E + E ++ ++ T NI++ G+C +G + + + ++ ++ C P+ VTY T ++
Sbjct: 198 AEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLID 257
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A K G++ A L ++M KG +P++++ N II+ LC + + EA E+L EM +G P
Sbjct: 258 AYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP 317
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE 420
+ TYN+L+ CK EM + S P+ +T+ L+ S+ K + +E
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS--PSVVTYTALINSMCKARNLNRAME 375
Query: 421 ---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+M G + + TY ++ + ++ EM + G P +Y IHG
Sbjct: 376 FFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC 435
Query: 478 DKGRLEDALSYFHEMRLKGMVPE 500
R+E+AL EM KG+ P+
Sbjct: 436 VLERMEEALGVVQEMVEKGLAPD 458
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 169/379 (44%), Gaps = 30/379 (7%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
++P +N +L+ + F + + + EM P +V TY L+N A +
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVV---TYTALINSMCKARNLN 371
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIIL 264
A+ FD+ + G + + L+ R + E E ++ F + T N +
Sbjct: 372 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 431
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G CVL + EA +++++ PD V+Y+T ++ +KG+L A ++ Q M EKG
Sbjct: 432 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 491
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD VT + +I LC +R+ EA ++ +EM + G P+ TY +LI C +
Sbjct: 492 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 551
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLY 441
DEM K LP+ +T++ L+ L K E +L ++ S TY+ +++
Sbjct: 552 HDEMIHKG--FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENC 609
Query: 442 VNWD-----------CEDKVRH----TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
N + C + H +E M ++ P + Y V+IHG G L A
Sbjct: 610 SNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAF 669
Query: 487 SYFHEMRLKGMVPEPRTGI 505
+ + EM G VP T I
Sbjct: 670 NLYKEMIHSGFVPHTVTVI 688
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 165/375 (44%), Gaps = 31/375 (8%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
++ A + R G SP + A+++ + +AR ++ FD+M P NE
Sbjct: 334 NFHQALVIHAEMVRNG-VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP---NE 389
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-E 247
+TY L++ ++ ++ EA + + E G + + + C + +E A E
Sbjct: 390 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 449
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ D+ + + I++G+C G + A + +++++ PD+VTY++ + L + +
Sbjct: 450 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 509
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L A L Q M + G PD T +I+A C + + +AL + EM ++G LP+ TY+
Sbjct: 510 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 569
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE-------------- 413
LI L K R L ++ + +P+++T++ L+++ E
Sbjct: 570 LINGLNKQARTREAKRLLFKLIYEES--VPSDVTYDTLIENCSNIEFKSVVALIKGFCMK 627
Query: 414 ----EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
E V E M K YNVI+ + K + ++EM G P +
Sbjct: 628 GLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTV 687
Query: 470 TVMIHGLYDKGRLED 484
+I L+ +G E+
Sbjct: 688 ITLIKALFKEGMNEE 702
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 85/215 (39%), Gaps = 36/215 (16%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE--ALE 348
S + V + + + A+ G P V++ N ++DA+ + + A E
Sbjct: 141 SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEE 200
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
V REM PNV TYN LI+ C + + QK C
Sbjct: 201 VYREMIRSRVSPNVYTYNILIRGFCSVGEL-----------QKGLGCFG----------- 238
Query: 409 LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
MERNGC + TYN ++ Y D+ + M KGM P+ S
Sbjct: 239 ------------EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLIS 286
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
Y V+I+GL +G +++A EM KG P+ T
Sbjct: 287 YNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 321
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 29/273 (10%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E SP + +++++ L RR E + EM D+ +E TY L+N Y +
Sbjct: 487 EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLN 546
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF------ESEKNEFGYD--- 256
+A+ + D G L D + L+ L + A+ ES ++ YD
Sbjct: 547 KALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 606
Query: 257 -------IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K++ ++ G+C+ G ++EA R ++ +++ +P Y ++ + G L
Sbjct: 607 ENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLP 666
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A L++ M G P VT +I AL FK+ + E + + R C N L
Sbjct: 667 KAFNLYKEMIHSGFVPHTVTVITLIKAL-FKEGMNEEMSEVIGDTLRSCRLNEA---ELA 722
Query: 370 KHLCKIKR----METVYEYLDEMEQKNGSCLPN 398
K L +I ME V L +M K+G LPN
Sbjct: 723 KVLVEINHKEGNMEAVLNVLTDM-AKDG-LLPN 753
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 212/484 (43%), Gaps = 41/484 (8%)
Query: 48 IINLQARNSEFLFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKG 107
+++LQ +S FL + A + FQ I V IL V KG
Sbjct: 10 LVHLQNHSSVLGFLNFSSKPHISSHFAVPASREPFQ-----AIVSRVCAILS--RVQWKG 62
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
E L Q L + ++ ++ D E+ FF W+S+ Y N F ++L+ L
Sbjct: 63 SSE--LKQLSPQLKAHHVAEIVAVHK-DTESVIQFFYWISKRPFYKHNMNCFISMLNRLV 119
Query: 168 RARRFVELIQV-------------FDEMPDLVNEKT---YGI-------LLNRYAAAHMV 204
R R F + + D +NE + +G LL + A MV
Sbjct: 120 RDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMV 179
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNII 263
E A ++ + G L F L+ L + V AE + + D+ T +
Sbjct: 180 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 239
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G C N+ A + ++K C+P+SVTY+T +N L +G++ AL + + M EKG
Sbjct: 240 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+P V T I ALC + EA+E++ MK RGC PNV TY +LI L ++ ++E
Sbjct: 300 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 359
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK- 439
+M ++ +PN +T+N L+ L + + ME +G +T TYN I+K
Sbjct: 360 LYHKMLKE--GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 417
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
L + D E K +E+M K G P +Y +I+G KG + +A M+ G P
Sbjct: 418 LCLGGDIE-KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEP 476
Query: 500 EPRT 503
+ T
Sbjct: 477 DEWT 480
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 178/367 (48%), Gaps = 14/367 (3%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGI 193
E A + + +EG P + +NA+++ L RF +++F M L N +TY
Sbjct: 355 EVAIGLYHKMLKEG-LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 413
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NE 252
++ +E+A+ +F++ + G L + + L+ +V A + K N
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D T N +++G+ G + A +++++++ P+ V+Y ++ +K GK+ AL
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L + M E G P+V + N +I+ L + R EA ++ +M +G LPNV TY +LI L
Sbjct: 534 SLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
C+ R + ++ +ME++ CLPN T++ L+ L K +E ERM GC+
Sbjct: 594 CRNGRTQFAFKIFHDMEKRK--CLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEP 647
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ DTY+ ++ + ++M+++G PD+ Y ++ ++ AL F
Sbjct: 648 TLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIF 707
Query: 490 HEMRLKG 496
H + KG
Sbjct: 708 HSIEAKG 714
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 174/377 (46%), Gaps = 24/377 (6%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE----LIQVF--DEMPDLVNEKT 190
E A +K + G P FN ++++L + + E L Q+F D PD+ T
Sbjct: 180 EGARNLYKQMLNSG-IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVF---T 235
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y L+ + ++ A GVFDR + G + + L+ LC V+ A E E
Sbjct: 236 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLE-EM 294
Query: 251 NEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
E G + + T + + C + + EA + K C P+ TY ++ L++ GKL
Sbjct: 295 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 354
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A+ L+ M ++G P+ VT N +I+ LC R AL++ M+ G L N TYN +
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 414
Query: 369 IKHLC---KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERM 422
IK LC I++ ++E + +M LP +T+N L+ V +L+ M
Sbjct: 415 IKGLCLGGDIEKAMVLFEKMLKMGP-----LPTVVTYNTLINGYLTKGNVNNAARLLDLM 469
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+ NGC+ TYN ++ + W + ++EM + G+ P+ SYT +I G G++
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529
Query: 483 EDALSYFHEMRLKGMVP 499
+ ALS M G P
Sbjct: 530 DIALSLLKRMEEMGCNP 546
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 160/354 (45%), Gaps = 13/354 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + A++ L R + I ++ +M + N TY L+N A+ +
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCV 269
F + G L + + ++ LC +E A FE K + T N ++NG+
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
GNV A R + ++ CEPD TY V+ +K GKL +A FQ M E G P+ V+
Sbjct: 456 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 515
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ID ++ AL +L+ M+ GC PNV +YN++I L K R + D+M
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV 575
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDC 446
++ LPN IT+ L+ L + + + ME+ C + TY+ + + C
Sbjct: 576 EQ--GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL----IYGLC 629
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++ E M + G P +Y+ ++ GL KGR +A +M+ +G P+
Sbjct: 630 QEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 683
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 146/308 (47%), Gaps = 14/308 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGI 193
E+A +F+ + G +P + A++D G+ + L++ +EM N ++Y
Sbjct: 495 ESASFYFQEMVECG-LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNA 553
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNE 252
++N + + EA + D+ E G L ++ + L+ LCR + A + F + EK +
Sbjct: 554 VINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 613
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
++ T + ++ G C G EA+R + + CEP TY+T V+ L +KG+ A
Sbjct: 614 CLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAE 669
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+L + M E+G PD ++ A C + AL++ ++ +G +++ Y +LI L
Sbjct: 670 QLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICAL 729
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKM 429
CK ++E D M +K + +EI + L+ L K E+ +L ME
Sbjct: 730 CKAGQVEEAQALFDNMLEKEWN--ADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTP 787
Query: 430 STDTYNVI 437
+ TY ++
Sbjct: 788 NIQTYVIL 795
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 45/265 (16%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P +NA+++ L + RF E ++ D+M + L N TY L++ + A
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIILNGW 267
+F ++ L +L + +L+ LC+ + AE +E G + + T + +++G
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERM-----SEIGCEPTLDTYSTLVSGL 659
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G YEA++ KD+ + PD Y + + A K ++ AL++F ++ KG + +
Sbjct: 660 CRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHL 719
Query: 328 VTCNCIIDALCFKKRIPEA-----------------------------------LEVLRE 352
+I ALC ++ EA +++L
Sbjct: 720 SIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHI 779
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKR 377
M+++ PN+ TY L + L +I +
Sbjct: 780 MESKNFTPNIQTYVILGRELSRIGK 804
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 178/378 (47%), Gaps = 22/378 (5%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A + F + R+G P ++ +L G+ E+ + + M P N + +
Sbjct: 454 ARSLFDSMIRKG-IKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISP---NHRIFN 509
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
++ YA M++E + +F + K+ G ++ + L+ LC+ V+ A F NE
Sbjct: 510 TVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINE 569
Query: 253 FGYDIKTMNIILN----GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ N++ N G C + + + + +++ PD V + T + L K+G++
Sbjct: 570 ---GVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRV 626
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A RL +M G KPDV++ N +ID CF R+ EA+++L M + G PN+ +YN+L
Sbjct: 627 MEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTL 686
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERN 425
+ CK R++ Y EM +K + P T+N +L L + E + M ++
Sbjct: 687 LHGYCKAGRIDNAYCLFREMLRKGVT--PGVETYNTILNGLFRSGRFSEARELYVNMIKS 744
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
S TY++IL + +C D+ ++ + + D ++ +MI GL+ GR EDA
Sbjct: 745 RKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDA 804
Query: 486 LSYFHEMRLKGMVPEPRT 503
+ F + G+VP T
Sbjct: 805 MDLFAAIPANGLVPSVVT 822
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 191/404 (47%), Gaps = 36/404 (8%)
Query: 121 TDDLIVNVINRYRFD----WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI 176
DD++VN + + D EA + + + G G +N +L L RR E
Sbjct: 117 VDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVG-CRLGVVSYNTLLKGLCDRRRAEEAR 175
Query: 177 QVFDEM---------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
++ M PD+V +Y I++N + V++A +F E G D+ +
Sbjct: 176 ELLHMMVDGQDSSCSPDVV---SYNIVINGFFNEGQVDKAYSLF---LEMGVSPDVVTYN 229
Query: 228 NLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
++ LC+ + V+ AE F+ EK ++ T N I++G C V A+ ++ ++
Sbjct: 230 TIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNV-TYNTIIDGLCKAQEVDMAEGVFQKMVD 288
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+P +VTY T ++ L K + A +FQ M ++G KPD VT N IID LC + I +
Sbjct: 289 KGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDK 348
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCK---IKRMETVYEYLDEMEQKNGSCLPNEITF 402
A V ++M ++G P+ TY +I LCK + R E V++ + + K PN T+
Sbjct: 349 AEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVK-----PNNGTY 403
Query: 403 NYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEME 458
N L+ S + EEV ++ M + + TY ++L L N C ++ R ++ M
Sbjct: 404 NCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKC-NEARSLFDSMI 462
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+KG+ P Y +M+HG KG L + + M G+ P R
Sbjct: 463 RKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHR 506
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 157/317 (49%), Gaps = 20/317 (6%)
Query: 204 VEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCRYKHVEVAETFF----ESEKNEFGYDIK 258
V EA+ V R+ E G + ++ LL LC + E A + + + D+
Sbjct: 135 VGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVV 194
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
+ NI++NG+ G V +A + ++ S PD VTY T ++ L K ++ A +FQ M
Sbjct: 195 SYNIVINGFFNEGQVDKAYSLFLEMGVS---PDVVTYNTIIDGLCKAQEVDRAEDVFQQM 251
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK---I 375
EKG KP+ VT N IID LC + + A V ++M ++G P+ TYN++I LCK +
Sbjct: 252 VEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAV 311
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTD 432
R E V++ + + K P+ +T+N ++ L K + + V ++M G K
Sbjct: 312 DRAEGVFQQMIDRGVK-----PDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNL 366
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY +I+ D+ +++M KG+ P+ +Y +IHG G+ E+ + EM
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426
Query: 493 RLKGMVPEPRT-GILVN 508
+ P+ T G+L++
Sbjct: 427 SAHDLEPDVFTYGLLLD 443
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 161/392 (41%), Gaps = 44/392 (11%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P +N I+D L +A+ + VF +M D + TY I+++ A V+ A GV
Sbjct: 328 PDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGV 387
Query: 211 FDRRKEFGELDDLSAFQNLLL-WLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCV 269
F + + G + + L+ +L + EV + E ++ D+ T ++L+ C
Sbjct: 388 FQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCK 447
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G EA+ + +I+ +P Y ++ KKG L L M G P+
Sbjct: 448 NGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRI 507
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I A + I E + + +MK +G PNV TY +LI LCK+ R++ ++M
Sbjct: 508 FNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQM- 566
Query: 390 QKNGSCLPNEITFNYLLKSL--------------------KKPE---------------- 413
N PN + FN L+ L +P+
Sbjct: 567 -INEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGR 625
Query: 414 --EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
E +++ M G K +YN ++ + D+ + M G+ P+ SY
Sbjct: 626 VMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNT 685
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++HG GR+++A F EM KG+ P T
Sbjct: 686 LLHGYCKAGRIDNAYCLFREMLRKGVTPGVET 717
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 164/394 (41%), Gaps = 46/394 (11%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +FN ++ + E++ +F +M P++V TYG L++ V++
Sbjct: 502 SPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVV---TYGTLIDALCKLGRVDD 558
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILN 265
A+ F++ G + F +L+ LC E V E F E DI N +L
Sbjct: 559 AVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLC 618
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G V EA+R ++ +PD ++Y T ++ ++ A++L M G KP
Sbjct: 619 NLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKP 678
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE-Y 384
++V+ N ++ C RI A + REM +G P V TYN+++ L + R E Y
Sbjct: 679 NIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELY 738
Query: 385 LDEMEQK------------NGSCLPN--------------------EITFNYLLKSLKK- 411
++ ++ + +G C N ITFN ++ L K
Sbjct: 739 VNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKG 798
Query: 412 --PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
E+ + + NG S TY +I + + +++ + MEK G P+
Sbjct: 799 GRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHML 858
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+I L D+G + A +Y ++ K E T
Sbjct: 859 NALIRKLLDRGEIPRAGAYLSKLDEKNFSLEAST 892
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 13/296 (4%)
Query: 222 DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKR-F 279
D + ++ CR +E+ F K + D +N +L G C V EA
Sbjct: 83 DCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVL 142
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM---WEKGRKPDVVTCNCIIDA 336
+ + + C V+Y T + L + + A L M + PDVV+ N +I+
Sbjct: 143 LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVING 202
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
+ ++ +A + EM G P+V TYN++I LCK + ++ + +M +K
Sbjct: 203 FFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVK-- 257
Query: 397 PNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
PN +T+N ++ L K +EV V ++M G K S TYN I+ D+
Sbjct: 258 PNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGV 317
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
+++M +G+ PD +Y +I GL ++ A F +M KG+ P+ T ++ D
Sbjct: 318 FQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIID 373
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 3/228 (1%)
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
R +D +K PD TY+ + + G+L F + + G + D + N ++ L
Sbjct: 71 RMLRDC-SNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGL 129
Query: 338 CFKKRIPEALEV-LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM-EQKNGSC 395
C KR+ EA+ V LR+M GC V +YN+L+K LC +R E E L M + ++ SC
Sbjct: 130 CDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSC 189
Query: 396 LPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
P+ +++N ++ +V G TYN I+ D+ ++
Sbjct: 190 SPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQ 249
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+M +KG+ P+ +Y +I GL ++ A F +M KG+ P T
Sbjct: 250 QMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVT 297
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 118/268 (44%), Gaps = 13/268 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N ++D A R E +++ D M P++V +Y LL+ Y A ++ A
Sbjct: 643 PDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIV---SYNTLLHGYCKAGRIDNA 699
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNG 266
+F G + + +L L R + E E + K+ + I T +IIL+G
Sbjct: 700 YCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDG 759
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C EA + ++ + + D +T+ ++ L K G+ A+ LF A+ G P
Sbjct: 760 FCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPS 819
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT I + L + + E + M+ G PN N+LI+ L + YL
Sbjct: 820 VVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLS 879
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEE 414
++++KN S E + +L SL EE
Sbjct: 880 KLDEKNFSL---EASTTSMLISLFSREE 904
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 187/420 (44%), Gaps = 61/420 (14%)
Query: 152 YSPGSNVFNAILDVLG-----RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
Y+P +NA+L L ARR + + P N TY IL+ A EE
Sbjct: 116 YAPSLLAYNAVLLALSDASLPSARRLLASMLRDGVAP---NVYTYNILVRALCARGQREE 172
Query: 207 AIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNII 263
A+GV D + G ++ + L+ CR V+ AE + E G + T N +
Sbjct: 173 ALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMR-EGGVRPSLVTFNTV 231
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+NG C G + +A++ + ++ + PD V+Y T V+ K G L AL +F M +KG
Sbjct: 232 VNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGV 291
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG-------------------------- 357
PDVVT +I A+C + A+ ++ +M+ RG
Sbjct: 292 VPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALL 351
Query: 358 ---------CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
P+V YN LI CK+ RM+ E + EME K P+ +T++ +L
Sbjct: 352 AMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMK--PDVVTYSTILSG 409
Query: 409 LKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDK----VRHTWEEMEKKG 461
K + E +M + G TY+ +++ CE++ +E+M + G
Sbjct: 410 YCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIR----GLCEERRLGDACELFEKMLQLG 465
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQ 520
+ PD+ +YT +I G +G ++ ALS EM KG++P+ T +L++ ++ + + Q
Sbjct: 466 LQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQ 525
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 164/367 (44%), Gaps = 54/367 (14%)
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYA 199
V REG P FN +++ L +A R + ++FDEM PD V +Y L++ Y
Sbjct: 215 VMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGV---SYNTLVSGYC 271
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK------NEF 253
A + EA+ VF + G + D+ F +L+ +CR ++E A + NEF
Sbjct: 272 KAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEF 331
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
T +++G+C G + +A K++ + + +P V Y +N K G++ A
Sbjct: 332 -----TFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARE 386
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
L M KG KPDVVT + I+ C A E+ R+M +G +P+ TY+SLI+ LC
Sbjct: 387 LIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLC 446
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDT 433
+ +R+ E ++M Q P+E T+ L+ K V
Sbjct: 447 EERRLGDACELFEKMLQLGLQ--PDEFTYTTLIDGHCKEGNV------------------ 486
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
K +EM KKG+ PD +Y+V+I GL R ++A ++
Sbjct: 487 --------------QKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLY 532
Query: 494 LKGMVPE 500
+ VP+
Sbjct: 533 YEDPVPD 539
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 164/371 (44%), Gaps = 24/371 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRA---RRFVELIQVFDEMPDLVNEKTYGILL 195
A F ++++G P F +++ + RA R V L+ E +NE T+ L+
Sbjct: 279 ALAVFAEMAQKG-VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALI 337
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFG 254
+ + +++A+ +E + + L+ C+ ++ A E E E
Sbjct: 338 DGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMK 397
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ T + IL+G+C +G+ A + ++K PD++TY++ + L ++ +LG A L
Sbjct: 398 PDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACEL 457
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F+ M + G +PD T +ID C + + +AL + EM +G LP+V TY+ LI L K
Sbjct: 458 FEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSK 517
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTY 434
R + L ++ ++ +P+ I + L+ + E V
Sbjct: 518 SARTKEAQRLLFKLYYEDP--VPDNIKYEALMHCCRTAEFKSVV---------------- 559
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+LK + ++ ++ M + D Y+V+IHG G + ALS+ ++
Sbjct: 560 -ALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLR 618
Query: 495 KGMVPEPRTGI 505
G P + I
Sbjct: 619 CGFSPNSTSTI 629
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 7/186 (3%)
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC-KIKRMET 380
G P ++ N ++ AL +P A +L M G PNV TYN L++ LC + +R E
Sbjct: 115 GYAPSLLAYNAVLLALS-DASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVI 437
+ D+M + C PN +T+N L+ + + EV ++ M G + S T+N +
Sbjct: 174 LGVVGDDM--RGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTV 231
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + R ++EM ++G+ PD SY ++ G G L +AL+ F EM KG+
Sbjct: 232 VNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGV 291
Query: 498 VPEPRT 503
VP+ T
Sbjct: 292 VPDVVT 297
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 170/370 (45%), Gaps = 22/370 (5%)
Query: 154 PGSNVFNAILDVLGRARRF--VELI--QVFDE--MPDLVNEKTYGILLNRYAAAHMVEEA 207
P +N+I+ L +AR EL+ Q+FD PD E TY +++ Y+ +EA
Sbjct: 305 PNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPD---EVTYTAMIHGYSCLGRWKEA 361
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNG 266
+F G + D+ F +L+ LC++K E AE F DI + +I+L+G
Sbjct: 362 AKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHG 421
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ G + + + + DS + +NA K+G + AL +F M +G P+
Sbjct: 422 YATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPN 481
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK----IKRMETVY 382
VVT +I ALC R+ +A+E L +M + G PN Y+SLI+ C IK E V
Sbjct: 482 VVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVS 541
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILK 439
E +D+ G PN F+ ++ SL V V + G + T+N ++
Sbjct: 542 EMMDQ-----GIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLID 596
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
Y DK + M G PD +Y+ +I+G + GR++D L F EM K + P
Sbjct: 597 GYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKP 656
Query: 500 EPRTGILVND 509
T LV D
Sbjct: 657 TTVTYSLVLD 666
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 182/423 (43%), Gaps = 24/423 (5%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVEL-------IQVFDEM---- 182
F E A+ F + R+ D N L L RAR V + +F+ +
Sbjct: 97 FSTEDAHHLFDELLRQ-DTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREE 155
Query: 183 --PDLV--NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
P +V TYGIL++ A + F R G D L LC K
Sbjct: 156 AGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKR 215
Query: 239 VEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTY 295
+ A + +E G D + N ++ C EA + K C PD V+Y
Sbjct: 216 TDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSY 275
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
++ L +G++ A LF M +KG P+VVT N I+ ALC + + +A VLR+M +
Sbjct: 276 TMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFD 335
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKP 412
P+ TY ++I + R + + EM ++ +P+ +TFN L+ SL K+
Sbjct: 336 NSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREG--LIPDIVTFNSLMDSLCKHKRS 393
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+E + + G K +Y+++L Y + + + M G+ D + ++
Sbjct: 394 KEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNIL 453
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGL 532
I+ +G +++AL F EMR +G+ P T V ++ + +K+ ++ S+GL
Sbjct: 454 INAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGL 513
Query: 533 KGN 535
K N
Sbjct: 514 KPN 516
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 194/427 (45%), Gaps = 19/427 (4%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
+T + +++ + +++ EAA F ++ + P ++ +L RFV++ +F
Sbjct: 378 VTFNSLMDSLCKHKRSKEAAEIFHSIATK--GHKPDIISYSILLHGYATEGRFVDMNNLF 435
Query: 180 DEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
M D + + + IL+N +A M++EA+ +F + G ++ + ++ LCR
Sbjct: 436 HSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRM 495
Query: 237 KHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKC-EPDSV 293
+ A S+ G T+ + ++ G+C G++ +AK +++ P+
Sbjct: 496 GRLADAMEKL-SQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNIT 554
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
+++ +++L +G++ A +F + G +PD+ T N +ID C ++ +A VL M
Sbjct: 555 FFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAM 614
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---K 410
+ G P+V TY++LI K R++ EM K P +T++ +L L
Sbjct: 615 VSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVK--PTTVTYSLVLDGLFRAG 672
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+ + M +G MS TY +IL+ +C D+ + ++ + +
Sbjct: 673 RTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILN 732
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVIKLTS 529
MIH LY R E+A F + G+VP T G+++ I L + G + I +S
Sbjct: 733 TMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMI----INLLKEGSVEEADIMFSS 788
Query: 530 LGLKGNA 536
+ G A
Sbjct: 789 MEKTGCA 795
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 190/446 (42%), Gaps = 34/446 (7%)
Query: 65 ETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDL 124
E A++ HS+A K + Y I ++ +T+G +N ++TD+
Sbjct: 395 EAAEIFHSIATKGHKPDIISY---SILLH--------GYATEGRFVD-MNNLFHSMTDNG 442
Query: 125 IVN-------VINRY--RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVEL 175
IV +IN + R + A F + +G SP + ++ L R R +
Sbjct: 443 IVADSHCFNILINAHAKRGMMDEALLIFTEMRGQG-VSPNVVTYATVIAALCRMGRLADA 501
Query: 176 IQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG-ELDDLSAFQNLLL 231
++ +M + N Y L+ + + +A + + G +++ F +++
Sbjct: 502 MEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIH 561
Query: 232 WLCRYKHVEVAETFFESEKNEFG--YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
LC V A+ F + G DI T N +++G+C++G + +A ++ + E
Sbjct: 562 SLCNEGRVMNAQDVFNLVIH-IGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTE 620
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD VTY+T +N K G++ L LF+ M K KP VT + ++D L R A ++
Sbjct: 621 PDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKM 680
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCK---IKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
EM G +++TY +++ LC+ T++ L M K + N T + L
Sbjct: 681 FHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILN--TMIHAL 738
Query: 407 KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
+K+ EE + + +G + TY V++ + ++ + MEK G P
Sbjct: 739 YKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSS 798
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEM 492
R +I L KG + A Y ++
Sbjct: 799 RLLNDIIRMLLQKGEIVKAGYYMSKV 824
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 179/378 (47%), Gaps = 19/378 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDV------LGRARRFVELIQVFDEMPDLVNEK 189
WEA F + + R P F++I+ V LGRA + E ++ +PD V
Sbjct: 346 WEAERVFNEMLQR--GVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTV--- 400
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
Y IL+N Y V A+ + + E G + D+ + LL LCR K ++ A+ F+
Sbjct: 401 IYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEM 460
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E+ F D T+ +++G+C GN+ +A ++ + +PD VTY T ++ K G+
Sbjct: 461 VERGVFP-DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE 519
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A L+ M + P ++ + +I+ C + EA + EMK +G P + T N+
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNT 579
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMER 424
+IK + + ++L+ M + P+ IT+N L+ S K E +++ ME
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMISE--GVPPDCITYNTLINSFVKEENFDRAFFLINNMEE 637
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G + TYN IL + + +M KG+ PD+ +YT +I+G K +++
Sbjct: 638 RGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKE 697
Query: 485 ALSYFHEMRLKGMVPEPR 502
A EM +G VP+ +
Sbjct: 698 AFRVHDEMLQRGFVPDDK 715
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 166/361 (45%), Gaps = 17/361 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + FN +L R E +VF+EM PDL+ ++ ++ ++ + A
Sbjct: 327 PNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLI---SFSSIVGVFSRNGELGRA 383
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKTMNIILN 265
+ F++ K G + D + L+ CR V A +E E G D+ T N +LN
Sbjct: 384 LAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKM-RNEMVERGCVMDVVTYNTLLN 442
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C + +A +K++++ PD T T ++ K G + AL LF+ M + KP
Sbjct: 443 GLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKP 502
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DVVT N ++D C + +A E+ +M +R P+ +++ LI C + + +
Sbjct: 503 DVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLW 562
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILKLYV 442
DEM++K P +T N ++K + + L M G TYN ++ +V
Sbjct: 563 DEMKEK--GIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFV 620
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ D+ ME++G+ P+ +Y ++ G GR+++A H+M KG+ P+
Sbjct: 621 KEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKS 680
Query: 503 T 503
T
Sbjct: 681 T 681
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 151/321 (47%), Gaps = 11/321 (3%)
Query: 184 DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE 243
DLV TY L+N Y +V EA G+ D G L + L+ LC+ E A+
Sbjct: 258 DLV---TYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAK 314
Query: 244 TFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ E G + T N +L C +V+EA+R + ++++ PD +++++ V
Sbjct: 315 RVLD-EMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGV 373
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
++ G+LG AL F+ M G PD V +I+ C + AL++ EM RGC+ +
Sbjct: 374 FSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMD 433
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL-- 419
V TYN+L+ LC+ K ++ E EM ++ P+ T L+ K + L
Sbjct: 434 VVTYNTLLNGLCRGKMLDDADELFKEMVER--GVFPDFYTLTTLIHGYCKDGNMTKALSL 491
Query: 420 -ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
E M K TYN ++ + +K + W +M + + P S++++I+G
Sbjct: 492 FETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCS 551
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
G + +A + EM+ KG+ P
Sbjct: 552 LGLVSEAFRLWDEMKEKGIKP 572
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 147/351 (41%), Gaps = 37/351 (10%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
+ +L+ Y A + E F ++ G ++A LL + + V++A +E
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
K+ ++ T+NI++N C G + + ++ + D VTY T VNA ++G +
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A L M KG KP + T N +I+ LC + A VL EM G PN T+N +
Sbjct: 276 SEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPM 335
Query: 369 IKHLCKIKRMETVYEYLDEMEQK------------------NG---------------SC 395
+ C+ + + +EM Q+ NG
Sbjct: 336 LVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGL 395
Query: 396 LPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
+P+ + + L+ + ++V L+ M GC M TYN +L D
Sbjct: 396 VPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADE 455
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++EM ++G+ PD + T +IHG G + ALS F M L+ + P+ T
Sbjct: 456 LFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVT 506
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 135/296 (45%), Gaps = 17/296 (5%)
Query: 240 EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
E +E F K F I N +L +G V A + ++D +KS + T V
Sbjct: 172 EGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMV 231
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
NAL K GKL M EKG D+VT N +++A C + + EA ++ M +G
Sbjct: 232 NALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLK 291
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
P + TYN+LI LCK E LDEM G C PN TFN +L + E+V W
Sbjct: 292 PGLFTYNALINGLCKEGSYERAKRVLDEM-LGVGLC-PNAATFNPMLVESCRKEDV-WEA 348
Query: 420 ER----MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
ER M + G +++ I+ ++ + +E+M+ G+ PD YT++I+G
Sbjct: 349 ERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILING 408
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRT----------GILVNDMNIKLKERGEQG 521
+ AL +EM +G V + T G +++D + KE E+G
Sbjct: 409 YCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 464
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 110/271 (40%), Gaps = 43/271 (15%)
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
V + + + KL FQ + ++G + CN ++ A+ + A +V +
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK-------------NGSCL--- 396
G + NV T N ++ LCK +++ V YL EME+K N C
Sbjct: 215 FVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274
Query: 397 -----------------PNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNV 436
P T+N L+ L K E VL+ M G + T+N
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNP 334
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+L + + + EM ++G+ PD S++ ++ G L AL+YF +M+ G
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394
Query: 497 MVPEPRT-GILVN------DMNIKLKERGEQ 520
+VP+ IL+N D++ LK R E
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEM 425
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 5/180 (2%)
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VV + +I +++ E E + ++ RG ++ N+L+ + K+ ++ ++ +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+ K+G+ + N T N ++ +L K + V L ME G TYN ++ Y
Sbjct: 214 DF-VKSGNIV-NVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCR 271
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + M KG+ P +Y +I+GL +G E A EM G+ P T
Sbjct: 272 RGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAAT 331
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 164/346 (47%), Gaps = 6/346 (1%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+GR ++L++ D N Y ++++ A +V +A ++ + D+
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ + A F K E ++ T NI+++G+C G V +AK ++
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMM 298
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K +PD VTY + ++ K+ A +F +M G +V +++ C K +
Sbjct: 299 KDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVD 358
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA+ + EM+ R +PNV TY+SLI LCK+ R+ + +DEM + PN +T++
Sbjct: 359 EAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQP--PNIVTYSS 416
Query: 405 LLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
+L +L K V +L ++ G + TY +++K + ++ +E++ KG
Sbjct: 417 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
D +YTVMI G DKG + AL+ +M G +P +T LV
Sbjct: 477 YNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELV 522
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 172/355 (48%), Gaps = 15/355 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + ++N I+D + +A+ + ++ +M PD+ TY L++ ++A + A
Sbjct: 199 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF---TYNALISGFSAVSKLNYA 255
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNG 266
I +F++ K+ ++ F L+ C+ V A+ K++ D+ T N +++G
Sbjct: 256 IDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDG 315
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C + V +AK + + + Y T VN K + A+ LF+ M + P+
Sbjct: 316 YCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPN 375
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT + +ID LC RI AL+++ EM +RG PN+ TY+S++ LCK ++ L
Sbjct: 376 VVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLT 435
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+ K+ P+ T+ L+K L + E+ V E + G + Y V+++ + +
Sbjct: 436 NL--KDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCD 493
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
DK +ME G P+ ++Y ++I L++K + A EM ++G++
Sbjct: 494 KGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 129/248 (52%), Gaps = 5/248 (2%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N ++ G C+ G++++A F ++ D V+Y T +N L K G++ AL+L + +
Sbjct: 133 TFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRV 192
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
K +P+ V N IID +C K + +A ++ +M + P+V TYN+LI + ++
Sbjct: 193 DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKL 252
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN 435
+ ++M+++N + PN TFN L+ K + VL M ++ K TYN
Sbjct: 253 NYAIDLFNKMKKENIN--PNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYN 310
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++ Y + + +K + ++ M G+ + + YT M++G +++A++ F EMR +
Sbjct: 311 SLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCR 370
Query: 496 GMVPEPRT 503
++P T
Sbjct: 371 KIIPNVVT 378
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 156/317 (49%), Gaps = 6/317 (1%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR-YKHVEVAETFFESE 249
Y I+++ ++A+ +F+ + G D+ + +L+ LC K + A+ E
Sbjct: 277 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 336
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
D+ T + +++ + G + EAK + ++I PD++TY + ++ K+ L
Sbjct: 337 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 396
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A ++F M KG +PD+VT + +I++ C KR+ + + + RE+ ++G +PN TYN+L+
Sbjct: 397 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 456
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNG 426
C+ ++ E EM + P+ +T+ LL L E+ L E+M+++
Sbjct: 457 LGFCQSGKLNAAKELFQEMVSRGVP--PSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 514
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ YN+I+ N D + + KG+ PD +Y VMI GL KG L +A
Sbjct: 515 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 574
Query: 487 SYFHEMRLKGMVPEPRT 503
F +M+ G P+ T
Sbjct: 575 MLFRKMKEDGCTPDDFT 591
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 150/321 (46%), Gaps = 12/321 (3%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR----YKHVEVAETF 245
T I++N Y + A V R + G D F L+ C + V + +
Sbjct: 136 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 195
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E ++ D+ T++ ++NG C+ G V EA +++ +PD VTY +N L K
Sbjct: 196 VEMKQRP---DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 252
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G AL LF+ M E+ K VV + +ID+LC +AL + EM+ +G +V TY
Sbjct: 253 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 312
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERM 422
+SLI LC + + + L EM +N +P+ +TF+ L+ K E + M
Sbjct: 313 SSLIGGLCNDGKWDDGAKMLREMIGRN--IIPDVVTFSALIDVFVKEGKLLEAKELYNEM 370
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G T TYN ++ + +C + ++ M KG PD +Y+++I+ R+
Sbjct: 371 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 430
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
+D + F E+ KG++P T
Sbjct: 431 DDGMRLFREISSKGLIPNTIT 451
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 14/261 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
EA + + ++R +P + +N+++D + E Q+FD M PD+V T
Sbjct: 362 EAKELYNEMITR--GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV---T 416
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESE 249
Y IL+N Y A V++ + +F G + + + L+L C+ + A E F E
Sbjct: 417 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 476
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ T I+L+G C G + +A ++ + KS+ Y ++ + K+
Sbjct: 477 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 536
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A LF ++ +KG KPDVVT N +I LC K + EA + R+MK GC P+ TYN LI
Sbjct: 537 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596
Query: 370 K-HLCKIKRMETVYEYLDEME 389
+ HL + +V E ++EM+
Sbjct: 597 RAHLGGSGLISSV-ELIEEMK 616
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 11/241 (4%)
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
F K + + E D T +N +K KL A + W+ G +PD +T + +++ C
Sbjct: 121 FCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFC 180
Query: 339 FKKRIPEALEV---LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
+ R+ EA+ + + EMK R P++ T ++LI LC R+ +D M +
Sbjct: 181 LEGRVSEAVALVDRMVEMKQR---PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQ- 236
Query: 396 LPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+E+T+ +L L K L+ +ME K S Y++++ D
Sbjct: 237 -PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 295
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNI 512
+ EME KG+ D +Y+ +I GL + G+ +D EM + ++P+ T + D+ +
Sbjct: 296 LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 355
Query: 513 K 513
K
Sbjct: 356 K 356
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 99/216 (45%), Gaps = 11/216 (5%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILL 195
F+ +S +G P + +N ++ ++ + ++F EM P +V TYGILL
Sbjct: 436 LFREISSKG-LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV---TYGILL 491
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FG 254
+ + +A+ +F++ ++ + + ++ +C V+ A + F S ++
Sbjct: 492 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 551
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ T N+++ G C G++ EA ++ + + C PD TY + A L +++ L
Sbjct: 552 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 611
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+ M G D T +ID L ++ L++L
Sbjct: 612 IEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 647
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 177/398 (44%), Gaps = 44/398 (11%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGIL 194
+ AY + ++ +G P + + +L L RR+ + + +F+EM D L + TY L
Sbjct: 349 QKAYELCRQMTGQG-LLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNL 407
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-------- 246
++ + AH + EA+ +FDR K+ G ++ + +LL+ C+ ++ A +
Sbjct: 408 IHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGF 467
Query: 247 ----------------------------ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKR 278
E ++N + T N+++NG C++ V E
Sbjct: 468 KPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDG 527
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
K + P +TY + +N K G +G+A ++Q M EKG P+++T ID C
Sbjct: 528 MLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYC 587
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
AL++L +++ RG P++ YN+LI C+ M + L + K+G PN
Sbjct: 588 RTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLL-VILLKDG-LAPN 645
Query: 399 EITFNYLL---KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+ +N L+ K+L +EV E M + G T TY ++ + +
Sbjct: 646 TVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYS 705
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
EM KG PD ++T + HGL G ++ A EMR
Sbjct: 706 EMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMR 743
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 144/352 (40%), Gaps = 39/352 (11%)
Query: 182 MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL-LWLCRYKHVE 240
+PD+ K+ LL R A ++A+ +F + G D F L+ L H +
Sbjct: 154 VPDI---KSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHED 210
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
F E E D + + + C LG+ A R +++ + + TY T V+
Sbjct: 211 AVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVD 270
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K G++ ALR+ M + G+K DV+ ++ C ++ + AL + +E G +P
Sbjct: 271 VLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVP 330
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEM-------------------------------- 388
Y LI+ ++ + YE +M
Sbjct: 331 TKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLF 390
Query: 389 EQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
E+ S LP+ T+N L+ K E + +RM++ G K S +TYN +L Y
Sbjct: 391 EEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKG 450
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
C D+ + EM +G P+ +Y ++ G K ++A + EM+ G+
Sbjct: 451 CMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGV 502
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 157/354 (44%), Gaps = 20/354 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+ ++DVL + R E ++V DEM D ++ L+ Y V A+ +F
Sbjct: 265 YRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETL 324
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
+ G + +L+ C V + + +E + G + L+ VL +
Sbjct: 325 KDG-IVPTKVMYGVLIRGC--DQVGMTQKAYELCRQMTGQGLLPSTFELS--LVLKGLLN 379
Query: 276 AKRFWKDII------KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+R WKD + PD TY ++ + KL AL LF M + G KP + T
Sbjct: 380 DRR-WKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINT 438
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N ++ C K + EA+++ EM G PNV TY +L++ K + Y LDEM+
Sbjct: 439 YNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMK 498
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
Q SC N+ T+N L+ + + EV +L+ G + TYN I+ +V
Sbjct: 499 QNGVSC--NDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGM 556
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+++M +KG+ P+ +YT I G G + AL +++R +G+ P+
Sbjct: 557 MGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPD 610
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 5/312 (1%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
YG+L+ M ++A + + G L +L L + + A FE
Sbjct: 335 YGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMA 394
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ D+ T N +++ C + EA + + K+ +P TY + + KKG +
Sbjct: 395 DSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDE 454
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A++L+ M +G KP+VVT ++ KK A +L EMK G N TYN LI
Sbjct: 455 AVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLIN 514
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGC 427
+C + R+ V L + +P +T+N ++ K + V ++M G
Sbjct: 515 GICMVDRVCEVDGMLKSFMSEG--FIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGL 572
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ TY + Y C D ++ ++G+ PD +Y +I+G +G + AL
Sbjct: 573 PPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQ 632
Query: 488 YFHEMRLKGMVP 499
+ G+ P
Sbjct: 633 LLVILLKDGLAP 644
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 128/312 (41%), Gaps = 42/312 (13%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE---LIQVFDEMPDLVNEKTY 191
D++ AY + + G S +N +++ + R E +++ F + TY
Sbjct: 486 DFDNAYALLDEMKQNG-VSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTY 544
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEK 250
++N + A M+ A V+ + +E G ++ + + + CR ++A + + +
Sbjct: 545 NSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRR 604
Query: 251 NEFGYDIKTMNIILNGWCVLGN---------------------VY--------------E 275
DI N ++NG+C GN VY E
Sbjct: 605 RGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKE 664
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
+F++ +IK D+ TY T ++ +K G + AL L+ M KG PD T +
Sbjct: 665 VSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTH 724
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
LC I A ++L EM+ PNV YN LI + +++ + DEM N
Sbjct: 725 GLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEM--LNMGI 782
Query: 396 LPNEITFNYLLK 407
P++ T++ L+
Sbjct: 783 QPDDTTYDILVS 794
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 151/304 (49%), Gaps = 6/304 (1%)
Query: 233 LCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LC+ KH E AE +F+ G ++ T N +++G C N+ EA + K ++ S E D
Sbjct: 432 LCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELD 491
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+TY + K K+ A++L M ++G KPD+ T N + C ++ E L +L
Sbjct: 492 RITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLD 551
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+MK+ G P++ TY ++I CK K M EYL E+ KNG PN + +N L+ +
Sbjct: 552 QMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTEL-MKNG-LRPNAVIYNALIGGYGR 609
Query: 412 PEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
+ +L+ M+ NG + + TYN ++ + ++V+ + + K +
Sbjct: 610 NGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIG 669
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLT 528
YT++I G G++++A+ YF EM +G+ P T + K + E K ++
Sbjct: 670 YTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMV 729
Query: 529 SLGL 532
SLG+
Sbjct: 730 SLGI 733
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 151/349 (43%), Gaps = 15/349 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVF--NAILDVLGRARRFVELIQVFDEMPDL---VNEKTY 191
EAA +F+ + + G NV NA++ L + E +V M + ++ TY
Sbjct: 440 EAAEIWFQVLGK----GLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITY 495
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
I++ A ++EAI + D + G DL F L C VE + K+
Sbjct: 496 NIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKS 555
Query: 252 E-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
E DI T I++G+C ++++A + +++K+ P++V Y + + G +
Sbjct: 556 EGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISD 615
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A+ + M G +P VT N ++ +C + E V + + V Y +I+
Sbjct: 616 AIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQ 675
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGC 427
CKI +++ Y EM + PN++T+ L+ + K EE + + M G
Sbjct: 676 GFCKIGKIDEAVMYFKEMHSRG--IPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGI 733
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
+ +YN ++ + D DK+ + EM + + D SY + G+
Sbjct: 734 VPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 166/408 (40%), Gaps = 46/408 (11%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+AA+ + R G P +N ++D L ++ R E ++ M P +V T
Sbjct: 228 DAAFAMLAELRRSG-IQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIV---T 283
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESE 249
+GIL++ A E V + FG + + ++ W CR H E + F E
Sbjct: 284 FGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMV 343
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN-ALTKKGKL 308
+ T N+I C G + A++ +++ + + + V L G+L
Sbjct: 344 SKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRL 403
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
LRL + M + KP+ I LC + EA E+ ++ +G NV T N+L
Sbjct: 404 DLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNAL 463
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
I LC+ M+ E VL+ M +G +
Sbjct: 464 IHGLCQGNNMK----------------------------------EATKVLKAMVNSGVE 489
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+ TYN++++ D+ ++M K+G PD ++ + +H + G++E+ L
Sbjct: 490 LDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHL 549
Query: 489 FHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
+M+ +G+ P+ T + D K K+ + + + +L GL+ NA
Sbjct: 550 LDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNA 597
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 118/303 (38%), Gaps = 41/303 (13%)
Query: 229 LLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
L+ LC+ +++ A ++ N D T NI++ G C + EA + D+IK
Sbjct: 463 LIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRG 522
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
+PD T+ F++ GK+ L L M +G KPD+VT IID C K + +A
Sbjct: 523 FKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKAN 582
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
E L E+ G PN YN+LI + + LD M K P +T+N L+
Sbjct: 583 EYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTM--KYNGIQPTPVTYNSLMY 640
Query: 408 --------------------------------------SLKKPEEVPWVLERMERNGCKM 429
+ K +E + M G
Sbjct: 641 WMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPP 700
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ TY ++ Y +++ ++EM G+ PD SY +I G + L+ +
Sbjct: 701 NKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESP 760
Query: 490 HEM 492
EM
Sbjct: 761 AEM 763
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 122/294 (41%), Gaps = 10/294 (3%)
Query: 214 RKEFGEL-------DDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
RK FGE+ D+ + ++ LCR ++ A E ++ + T N++++
Sbjct: 195 RKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMD 254
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G V EA R +++ + P VT+ ++ L + + G + Q M G P
Sbjct: 255 ALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITP 314
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ V N +I C K EAL++ EM ++G V TYN + K LCK ME + L
Sbjct: 315 NEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKIL 374
Query: 386 DEMEQKNG--SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
DEM C + L+ + + V ++ M K + ++
Sbjct: 375 DEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCK 434
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
++ W ++ KG+G + + +IHGL +++A M G+
Sbjct: 435 SGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGV 488
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 7/264 (2%)
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFV 299
A+ F E IKT +I++ G + A++ + ++ K PD TY +
Sbjct: 159 AADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMI 218
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
AL + G++ A + + G +P VVT N ++DALC R+ EA + M
Sbjct: 219 KALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVR 278
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK-SLKKP--EEVP 416
P++ T+ LI L + ++ V L EM+ PNE+ +N ++ +K E
Sbjct: 279 PSIVTFGILISGLARGQQFGEVGAVLQEMQ--GFGITPNEVIYNEMIGWHCRKGHCSEAL 336
Query: 417 WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY-TVMIHG 475
+ + M G K + TYN+I K + +EM GM + +V+
Sbjct: 337 KLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWH 396
Query: 476 LYDKGRLEDALSYFHEMRLKGMVP 499
L GRL+ L EM + + P
Sbjct: 397 LRGTGRLDLVLRLIREMLARFLKP 420
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN-RGCLPNVTT 364
G L A F + +G P + TC+ +++AL ++ A +V EM++ + P+V T
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLER 421
Y ++IK LC+ ++ + L E+ + P +T+N L+ +L K EE + R
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAEL--RRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGR 271
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M + S T+ +++ +V +EM+ G+ P++ Y MI KG
Sbjct: 272 MVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGH 331
Query: 482 LEDALSYFHEMRLKGM 497
+AL F EM KG+
Sbjct: 332 CSEALKLFDEMVSKGI 347
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 71/200 (35%), Gaps = 40/200 (20%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETF 245
N Y L+ Y + +AIG+ D K G + +L+ W+C VE V F
Sbjct: 596 NAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVF 655
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI---------------------- 283
+ + + II+ G+C +G + EA ++K++
Sbjct: 656 AQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKS 715
Query: 284 -------------IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
+ PDSV+Y T ++ + L + M + K D +
Sbjct: 716 GNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSY 775
Query: 331 NCIIDAL----CFKKRIPEA 346
N +D + C K+ + A
Sbjct: 776 NAFVDGITTPWCQKEAVSNA 795
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 183/377 (48%), Gaps = 17/377 (4%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEK 189
R D EA F K ++ D P + ++ L + R E + + EM + N
Sbjct: 303 RID-EAMDLFVKM--KDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIH 359
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-S 248
TY +L++ + +E+A + + E G + ++ + L+ C+ +E A E
Sbjct: 360 TYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELM 419
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
E + +T N ++ G+C NV++A +++ K PD VTY + ++ + G
Sbjct: 420 ESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
+A RL M ++G PD T +ID+LC KR+ EA ++ ++ + +PNV Y +L
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN 425
I CK ++ + L++M KN CLPN +TFN L+ L K +E + E+M +
Sbjct: 539 IDGYCKAGKVNEAHLMLEKMLSKN--CLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKI 596
Query: 426 GCK--MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+ +STDT +I +L + D + R +++M G PD +YT I +GRL+
Sbjct: 597 DLQPTVSTDTI-LIHRLLKDGDFDHAYRR-FQQMLSSGTKPDAHTYTTFIQTYCREGRLQ 654
Query: 484 DALSYFHEMRLKGMVPE 500
DA +M+ G+ P+
Sbjct: 655 DAEDMVAKMKENGVSPD 671
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 160/352 (45%), Gaps = 18/352 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N +L+ L R E+ QV+ EM + N TY ++N Y VEEA
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFE------SEKNEFGYDIKTMNIILNGWCV 269
E G D + +L++ C+ K ++ A F+ +NE Y +++G CV
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAY-----THLIHGLCV 300
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ EA + + C P TY + AL + AL L + M EKG KP++ T
Sbjct: 301 ERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHT 360
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ID+LC + ++ +A E+L +M +G +PNV TYN+LI CK +E + ++ ME
Sbjct: 361 YTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELME 420
Query: 390 QKNGSCLPNEITFNYLLKSLKK--PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+N PN T+N L+K K + VL +M TYN ++
Sbjct: 421 SRNLR--PNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D M +G+ PD +YT MI L R+E+A F + K ++P
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIP 530
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 146/285 (51%), Gaps = 7/285 (2%)
Query: 223 LSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ + LL L R+ V E+ + + E +++ +I T N ++NG+C +GNV EA ++
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
I+++ +PD TY + + ++ L +A ++F+ M KG + + V +I LC ++
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
RI EA+++ +MK+ C P V TY LIK LC +R + EME+K PN T
Sbjct: 303 RIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIK--PNIHT 360
Query: 402 FNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
+ L+ SL K E+ +L +M G + TYN ++ Y + E ME
Sbjct: 361 YTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELME 420
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + P+ R+Y +I G Y K + A+ ++M + ++P+ T
Sbjct: 421 SRNLRPNTRTYNELIKG-YCKRNVHKAMGVLNKMLERKVLPDVVT 464
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 129/277 (46%), Gaps = 16/277 (5%)
Query: 241 VAETFF-----------ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
VA+T F ES + ++ I N +LN G V E K+ + ++++ K
Sbjct: 156 VADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVC 215
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P+ TY VN K G + A + + E G PD T +I C +K + A +V
Sbjct: 216 PNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+EM +GC N Y LI LC +R++ + +M K+ C P T+ L+K+L
Sbjct: 276 FKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKM--KDDDCYPTVRTYTVLIKAL 333
Query: 410 ---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
++ E +++ ME G K + TY V++ + +K R +M +KG+ P+
Sbjct: 334 CGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNV 393
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+Y +I+G +G +EDAL M + + P RT
Sbjct: 394 ITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRT 430
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 194/441 (43%), Gaps = 35/441 (7%)
Query: 106 KGEIEKALNQCELTLTDDLIVN------VINRY--RFDWEAAYTFFKWVSREGDYSPGSN 157
+G IE AL+ EL + +L N +I Y R +A K + R+ P
Sbjct: 406 RGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERK--VLPDVV 463
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPD--LVNEK-TYGILLNRYAAAHMVEEAIGVFDRR 214
+N+++D R+ F ++ M D LV + TY +++ + VEEA +FD
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWCVLGN 272
++ + ++ + L+ C+ V A E KN + T N +++G C G
Sbjct: 524 EQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSL-TFNALIHGLCTDGK 582
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+ EA + ++K +P T ++ L K G A R FQ M G KPD T
Sbjct: 583 LKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTT 642
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
I C + R+ +A +++ +MK G P++ TY+SLIK + R + + L M +
Sbjct: 643 FIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMH--D 700
Query: 393 GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDT-YNVILKLYVNWDCEDKVR 451
C P++ TF L+K L E ++ E C MS ++++++L
Sbjct: 701 TGCEPSQHTFLSLIKHLL--EMKYGKVKGGEPGVCVMSNMMEFDIVVEL----------- 747
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK-GMVPEPRTGILVNDM 510
E+M + G+ P+ +SY ++ G+ + G L A F M+ K G+ P +
Sbjct: 748 --LEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSC 805
Query: 511 NIKLKERGEQGKKVIKLTSLG 531
KL++ E K V + +G
Sbjct: 806 CCKLEKHNEAAKVVDDMICVG 826
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 146/316 (46%), Gaps = 10/316 (3%)
Query: 177 QVFDEMP---DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
+VF EMP NE Y L++ ++EA+ +F + K+ + + L+ L
Sbjct: 274 KVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKAL 333
Query: 234 C-RYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
C + E E E+ +I T ++++ C + +A+ +++ P+
Sbjct: 334 CGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNV 393
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
+TY +N K+G + AL + + M + +P+ T N +I C K+ + +A+ VL +
Sbjct: 394 ITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYC-KRNVHKAMGVLNK 452
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--- 409
M R LP+V TYNSLI C+ ++ Y L M + +P+ T+ ++ SL
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG--LVPDPWTYTSMIDSLCKS 510
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
K+ EE + + +E+ + Y ++ Y ++ E+M K P+ ++
Sbjct: 511 KRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTF 570
Query: 470 TVMIHGLYDKGRLEDA 485
+IHGL G+L++A
Sbjct: 571 NALIHGLCTDGKLKEA 586
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 34/215 (15%)
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y T +N+L + G + +++ M E P++ T N +++ C + EA + + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
G P+ TY SLI C+ K +++ ++ EM K C NE+ + +L+ L
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKG--CRRNEVAYTHLIHGL----- 298
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
V R+ D+ + +M+ P R+YTV+I
Sbjct: 299 --CVERRI-------------------------DEAMDLFVKMKDDDCYPTVRTYTVLIK 331
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
L R +AL+ EM KG+ P T ++ D
Sbjct: 332 ALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLID 366
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 132/350 (37%), Gaps = 69/350 (19%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYG---ILLNRYAAAHMVEEAIGV 210
P S FNA++ L + E + ++M + + T IL++R + A
Sbjct: 565 PNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRR 624
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCV 269
F + G D + + CR ++ AE K N D+ T + ++ G+
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGD 684
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL-------TKKGKLGTAL---------- 312
LG A K + + CEP T+ + + L K G+ G +
Sbjct: 685 LGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIV 744
Query: 313 -RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR-GCLPNVTTYNSLIK 370
L + M E G P+ + ++ +C + A +V M+ + G P+ +N+L+
Sbjct: 745 VELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLS 804
Query: 371 HLCKIKRMETVYEYLDEM-----------------------EQKNGSCLPNEITFNYLLK 407
CK+++ + +D+M E++ G+ + F LL+
Sbjct: 805 CCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSV-----FQNLLQ 859
Query: 408 SLKKPEEVPW------------------VLERMERNGCKMSTDTYNVILK 439
+E+ W + ME+NGC S+ TY+++++
Sbjct: 860 CGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIE 909
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 21/216 (9%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
+YA+ + L G +G ++ M + D V + LC K E+ E L+
Sbjct: 125 SYASLLTLLINNGYVGVVFKIRLLMI---KSCDSVADTLFVLDLCRKMNKDESFE-LKYK 180
Query: 354 KNRGCLPNVTTYNSLIKHLCK---IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
GC YN+L+ L + + M+ VY ME PN T+N ++
Sbjct: 181 LIIGC------YNTLLNSLARFGLVDEMKQVY-----MEMLEDKVCPNIYTYNKMVNGYC 229
Query: 411 KP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
K EE + + G TY ++ Y D ++EM KG ++
Sbjct: 230 KVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEV 289
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+YT +IHGL + R+++A+ F +M+ P RT
Sbjct: 290 AYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRT 325
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 177/370 (47%), Gaps = 12/370 (3%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM 182
D IVN + + A TF + EG ++P SN FN +L +L R+ F + +F+ +
Sbjct: 93 DAIVNAY-VHSHSTDQALTFLHHMIHEG-HAPLSNTFNNLLCLLIRSNYFDKAWWIFNVL 150
Query: 183 PD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
++N ++GI++ A + +EFG ++ + L+ C+ V
Sbjct: 151 KSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVM 210
Query: 241 VAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
+A+ F + + G + T ++++NG+ G E + ++++ +S P++ Y
Sbjct: 211 LAKNLF-CKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCL 269
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
++ G + A ++F M EKG V+T N +I LC K+ EA++++ ++ G
Sbjct: 270 ISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV 418
PN+ TYN LI C + +M+T ++++ S P +T+N L+ K E +
Sbjct: 330 SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS--PTLVTYNTLIAGYSKVENLAGA 387
Query: 419 LE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
L+ ME S TY +++ + + DK MEK G+ PD +Y+V+IHG
Sbjct: 388 LDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHG 447
Query: 476 LYDKGRLEDA 485
G +++A
Sbjct: 448 XCVNGNMKEA 457
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 129/306 (42%), Gaps = 7/306 (2%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y ++N Y +H ++A+ G + F NLL L R + + A F K
Sbjct: 92 YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLK 151
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
++ + + I++ G C G R + + P+ V Y T ++ K G +
Sbjct: 152 SKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVML 211
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP-EALEVLREMKNRGCLPNVTTYNSLI 369
A LF M G P+ T + +++ FK+ + E ++ M G +PN YN LI
Sbjct: 212 AKNLFCKMDRLGLVPNQHTYSVLMNGF-FKQGLQREGFQMYENMNRSGIVPNAYAYNCLI 270
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
C ++ ++ EM +K +C +T+N L+ L KK E ++ ++ + G
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIAC--GVMTYNILIGGLCRGKKFGEAVKLVHKVNKVG 328
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ TYN+++ + + D + +++ G+ P +Y +I G L AL
Sbjct: 329 LSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGAL 388
Query: 487 SYFHEM 492
EM
Sbjct: 389 DLVKEM 394
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 45/260 (17%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
RE + G +N ++ L R ++F E +++ ++ P++V TY IL+N +
Sbjct: 290 REKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIV---TYNILINGFCDV 346
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA------------------- 242
++ A+ +F++ K G L + L+ + +++ A
Sbjct: 347 GKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTY 406
Query: 243 -----------------ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
E EK+ D+ T +++++G CV GN+ EA + +K + +
Sbjct: 407 TILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGE 466
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+P+SV Y T ++ K+G ALRL M G P+V + + LC ++ E
Sbjct: 467 MHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKE 526
Query: 346 ALEVLREMKNRGCLPNVTTY 365
A +L +M N G P+V+ Y
Sbjct: 527 AELLLGQMINSGLKPSVSLY 546
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 150/309 (48%), Gaps = 7/309 (2%)
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILN 265
I +F + + G +L L+ C H+ A + F + K + D T+N ++
Sbjct: 112 VISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIK 171
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G + A F ++ + D V+Y T +N L K G+ RL + + KP
Sbjct: 172 GLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKP 231
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DVV II LC KR+ +A ++ EM +G PNV TYN+LI C + ++ + L
Sbjct: 232 DVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLL 291
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+EM+ KN + P+ TFN L+ +L K +E + E M+ + TY ++
Sbjct: 292 NEMKLKNIN--PDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLC 349
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
++ ++M+++G+ PD SYT+++ L GRLE+A +F + +KG R
Sbjct: 350 KNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVR 409
Query: 503 T-GILVNDM 510
T +++N +
Sbjct: 410 TYNVMINGL 418
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 159/360 (44%), Gaps = 15/360 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + F+ IL L + + ++ +I +F + P+L T IL+N + + A
Sbjct: 91 PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLC---TLNILINCFCHLAHITFA 147
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
VF + G D L+ LC ++ A F + + F D + ++NG
Sbjct: 148 FSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLING 207
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G R + + +PD V Y T ++ L K ++G A L+ M KG P+
Sbjct: 208 LCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPN 267
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V T N +I C + EA +L EMK + P+V T+N LI L K +++ +
Sbjct: 268 VFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFE 327
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM+ KN PN +T+ L+ L K E + ++M+ G + +Y ++L
Sbjct: 328 EMKHKNM--FPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCK 385
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + ++ + KG + R+Y VMI+GL G D + +M KG +P+ T
Sbjct: 386 GGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAIT 445
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 135/315 (42%), Gaps = 42/315 (13%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILL 195
A++ F + + G Y P + N ++ L G +R + +++ +YG L+
Sbjct: 147 AFSVFANILKRG-YHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLI 205
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFG 254
N A + + + + D+ + ++ LC+ K V + + + E
Sbjct: 206 NGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGIS 265
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T N ++ G+C++GN+ EA ++ PD T+ ++AL K+GK+ A+ L
Sbjct: 266 PNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISL 325
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP-------------- 360
F+ M K P++VT +ID LC + A+ + ++MK +G P
Sbjct: 326 FEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCK 385
Query: 361 ---------------------NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
NV TYN +I LCK V + +ME K C+P+
Sbjct: 386 GGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGK--GCMPDA 443
Query: 400 ITFNYLLKSLKKPEE 414
ITF ++ +L + +E
Sbjct: 444 ITFKTIICALFEKDE 458
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 12/180 (6%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
+ +P FN ++D LG+ + E I +F+EM P++V TY L++ H +
Sbjct: 298 NINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIV---TYTSLIDGLCKNHHL 354
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNI 262
E AI + + KE G D+ ++ LL LC+ +E A+ FF+ + GY +++T N+
Sbjct: 355 ERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVK-GYHLNVRTYNV 413
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++NG C G + + C PD++T+ T + AL +K + A + + M +G
Sbjct: 414 MINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARG 473
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N ++ E + +EM PD+ T+ IL++ ++E
Sbjct: 265 SPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVY---TFNILIDALGKEGKIDE 321
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILN 265
AI +F+ K ++ + +L+ LC+ H+E A + K + D+ + I+L+
Sbjct: 322 AISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLD 381
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G + AK+F++ ++ + TY +N L K G G + L M KG P
Sbjct: 382 ALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMP 441
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
D +T II AL K +A + LREM RG L
Sbjct: 442 DAITFKTIICALFEKDENDKAEKFLREMIARGLL 475
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 115/242 (47%), Gaps = 10/242 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++ I+ L + +R + ++ EM P++ TY L+ + ++EA
Sbjct: 231 PDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVF---TYNTLIYGFCIMGNLKEA 287
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNG 266
+ + K D+ F L+ L + ++ A + FE K++ + +I T +++G
Sbjct: 288 FSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDG 347
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C ++ A K + + +PD +Y ++AL K G+L A + FQ + KG +
Sbjct: 348 LCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLN 407
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V T N +I+ LC + +++ +M+ +GC+P+ T+ ++I L + + ++L
Sbjct: 408 VRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLR 467
Query: 387 EM 388
EM
Sbjct: 468 EM 469
>gi|125549949|gb|EAY95771.1| hypothetical protein OsI_17645 [Oryza sativa Indica Group]
Length = 240
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 119/212 (56%), Gaps = 2/212 (0%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D +Y+ +++AL K GK A ++F+ M +KG DVV N I ++ + + A+ +
Sbjct: 9 DLHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQGVDFAIRLY 68
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
R+M + GC PN +T+N+++K LCK R + Y ++ +M + PN +T++ + L
Sbjct: 69 RQMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFG--IEPNVLTYHCFFQYLS 126
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+P+EV + E+M GC DTY +++K + W V W+ ME++G+ PD +Y
Sbjct: 127 RPQEVLGLFEKMLERGCWPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYN 186
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+I L KG ++ A Y EM KG+ P+PR
Sbjct: 187 SLIDALLQKGMVDLARKYDEEMLSKGLSPKPR 218
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Query: 243 ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
+ F E ++ D+ N ++ + V A R ++ ++ + C+P++ T+ T V L
Sbjct: 31 KVFKEMKQKGMAIDVVAYNTAIHSVGLAQGVDFAIRLYRQMVDAGCKPNASTFNTIVKLL 90
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K+G+ Q M + G +P+V+T +C L R E L + +M RGC P +
Sbjct: 91 CKEGRFKEGYAFVQQMHKFGIEPNVLTYHCFFQYLS---RPQEVLGLFEKMLERGCWPRM 147
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
TY LIK + + V+ ME++ S P+ +N L+ +L
Sbjct: 148 DTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLS--PDAFAYNSLIDAL 192
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 174/396 (43%), Gaps = 30/396 (7%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE------------------ 174
R D + A FFKW + + + + I+ ++ RAR + +
Sbjct: 140 REDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGF 199
Query: 175 -LIQVFDEMPDLVN-----EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
+ +FD + N + +L + + ++EEA F R + F L +
Sbjct: 200 PVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNF 259
Query: 229 LLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
LL L + + ++ FF + T N++++ C G++ ++R + + +
Sbjct: 260 LLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMG 319
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
PD VTY + ++ K G L LF M + G PD++T N +I+ C +++P A
Sbjct: 320 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAF 379
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
E EMKN G PNV TY++LI CK M+ + +M + LPNE T+ L+
Sbjct: 380 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRT--GLLPNEFTYTSLID 437
Query: 408 SLKKPEEV--PW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
+ K + W +L M + G K++ TY +L + + M K G+ P
Sbjct: 438 ANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP 497
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+Q+ YT ++HG R+EDA+ +M + P+
Sbjct: 498 NQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPD 533
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 168/357 (47%), Gaps = 15/357 (4%)
Query: 153 SPGSNVFNAILDVLGR------ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
+P +N ++D L + +RR ++ PD+V TY L++ Y +EE
Sbjct: 286 APSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVV---TYNSLIDGYGKVGSLEE 342
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
+F+ K+ G + D+ + L+ C+++ + A E F E + N ++ T + +++
Sbjct: 343 VASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLID 402
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+C G + A + + D+ ++ P+ TY + ++A K G L A +L M + G K
Sbjct: 403 AFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKL 462
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
++VT ++D LC R+ EA EV R M G PN Y +L+ K +RME + L
Sbjct: 463 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 522
Query: 386 DEMEQKNGSCLPNEITFNYLL---KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+M + N P+ I + ++ S +K EE +LE M+ G + I+ Y
Sbjct: 523 KQMTECNIK--PDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 580
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ ++EM+ G+ +Y V+I GL G +E A+ YF M G+ P
Sbjct: 581 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQP 637
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 164/377 (43%), Gaps = 12/377 (3%)
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAA 201
W +R S GS VF+ + V E + F M + L ++ LL+R + +
Sbjct: 209 WSTRNICVS-GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKS 267
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKT 259
+ F+ G + + ++ +LC+ +E + F + E G D+ T
Sbjct: 268 GNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLF-VQMREMGLSPDVVT 326
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N +++G+ +G++ E + ++ C PD +TY +N K K+ A F M
Sbjct: 327 YNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMK 386
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
G KP+VVT + +IDA C + + A+++ +M+ G LPN TY SLI CK +
Sbjct: 387 NNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLT 446
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNV 436
++ L++M Q N +T+ LL L K E V M ++G + Y
Sbjct: 447 EAWKLLNDMLQAGVKL--NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTA 504
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ Y+ + + ++M + + PD Y +I G + +LE+ EM+ +G
Sbjct: 505 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 564
Query: 497 MVPEPRTGILVNDMNIK 513
+ P + D K
Sbjct: 565 ISANPVISTTIIDAYFK 581
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 159/390 (40%), Gaps = 50/390 (12%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
RE SP +N+++D G+ E+ +F+EM PD++ TY L+N Y
Sbjct: 316 REMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII---TYNGLINCYCKF 372
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK------NEFGY 255
+ A F K G ++ + L+ C+ ++ A F + NEF Y
Sbjct: 373 EKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTY 432
Query: 256 ------------------------------DIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
+I T +L+G C G + EA+ ++ ++K
Sbjct: 433 TSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLK 492
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
P+ Y V+ K ++ A+++ + M E KPD++ II C ++++ E
Sbjct: 493 DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEE 552
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
+L EMK+RG N ++I K + + EM+ +T+ L
Sbjct: 553 TKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE--ATIVTYCVL 610
Query: 406 LKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ L K V ++ RM G + + Y ++ +C + + ++EM+ +GM
Sbjct: 611 IDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGM 670
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
PD ++T +I G G L++AL M
Sbjct: 671 TPDITAFTALIDGNLKHGNLQEALVLISRM 700
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 149/351 (42%), Gaps = 42/351 (11%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM-PDLV--NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+ A+LD L +A R +E +VF M D + N++ Y L++ Y A +E+A+ + +
Sbjct: 467 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 526
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
E DL + +++ C + +E E
Sbjct: 527 ECNIKPDLILYGSIIWGHCSQRKLE----------------------------------E 552
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
K +++ + V T ++A K GK AL FQ M + G + +VT +ID
Sbjct: 553 TKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLID 612
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
LC + A++ M + G PNV Y SLI LCK +E+ + DEM+ + +
Sbjct: 613 GLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMT- 671
Query: 396 LPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+ F L+ K +E ++ RM + Y ++ + + R
Sbjct: 672 -PDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARK 730
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ EM +KG+ P++ ++ Y +G+L++A+ +EM G++ E T
Sbjct: 731 FFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 5/251 (1%)
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
C S + + + G L A F M P +CN ++ L
Sbjct: 215 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 274
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+ +M G P+V TYN +I +LCK +E +M + S P+ +T+N L+
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLS--PDVVTYNSLID 332
Query: 408 SLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
K EEV + M+ GC TYN ++ Y ++ + + EM+ G+ P
Sbjct: 333 GYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKP 392
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKV 524
+ +Y+ +I +G ++ A+ F +MR G++P T + D N K E K +
Sbjct: 393 NVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLL 452
Query: 525 IKLTSLGLKGN 535
+ G+K N
Sbjct: 453 NDMLQAGVKLN 463
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 180/397 (45%), Gaps = 51/397 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLV--NEKTYGILLNRYAAAHMVEEAIGVF 211
P + I+D +A + + + F++M + V NE+TY +++N A + +A V
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVL 64
Query: 212 DRRKEF--------------------GELD-----------------DLSAFQNLLLWLC 234
++ GE+D D+ + +++ LC
Sbjct: 65 KEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLC 124
Query: 235 RYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC-EPDS 292
R ++ A E E + D T + ++ GWC V EA + +K+I+ S +PD
Sbjct: 125 RDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDV 184
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRK--PDVVTCNCIIDALCFKKRIPEALEVL 350
VTY ++ K G L A+++ M +GRK P+VVT + ++ LC + +AL++
Sbjct: 185 VTYTALIDGFCKSGNLEKAMKMLGVM--EGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS-- 408
R M ++GC+PNV TY +LI LC +++ +DEM C P+ +++N LL
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT--CCPPDTVSYNALLDGYC 300
Query: 409 -LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME-KKGMGPDQ 466
L + EE + + M C TY +++ + N ++ R E M+ G+ PD
Sbjct: 301 RLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+Y++++ G R +A + EM + + P T
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVT 397
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 190/430 (44%), Gaps = 54/430 (12%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM-------PDLVNEKTYGILLNRYA------ 199
+P +N +++ L +AR + +V EM PDLV TY ++N +
Sbjct: 38 APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLV---TYSTVINGFCKQGEMD 94
Query: 200 -AAHMVEEAI----------------------GVFDRRKEF-------GELDDLSAFQNL 229
A ++ E + G DR E G D F L
Sbjct: 95 RACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 154
Query: 230 LLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
+ C + V+ A ++ + + D+ T +++G+C GN+ +A + + K
Sbjct: 155 ITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRK 214
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
C P+ VTY++ ++ L K G L AL LF+ M KG P+VVT +I LC ++ A
Sbjct: 215 CVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAAR 274
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
++ EM C P+ +YN+L+ C++ R+E + EM K SCLP+ IT+ L++
Sbjct: 275 LLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATK--SCLPDRITYTCLVR 332
Query: 408 SL---KKPEEVPWVLERME-RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
+ EE ++LE M+ G TY++++ Y + +EM + +
Sbjct: 333 GFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVA 392
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKK 523
P+ +Y+ +I GL GR++ A+ M K + P T V +L + E K
Sbjct: 393 PNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKL 452
Query: 524 VIKLTSLGLK 533
++ + + GL+
Sbjct: 453 LVAMAAHGLE 462
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 189/425 (44%), Gaps = 21/425 (4%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFD 180
LI N + D A +K + + P + A++D G + ++++ V +
Sbjct: 154 LITGWCNARKVD--EALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVME 211
Query: 181 EMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
+ N TY LL+ A +++A+ +F R G + ++ + L+ LC V+
Sbjct: 212 GRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVD 271
Query: 241 VAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
A E D + N +L+G+C LG + EAK+ +K++ C PD +TY V
Sbjct: 272 AARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLV 331
Query: 300 NALTKKGKLGTALRLFQAM-WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
+L A L + M G PDVVT + ++ KR EA E ++EM R
Sbjct: 332 RGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV 391
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--P 416
PN TY+SLI LCK R++ E L M K P+ TFN ++ +L + ++
Sbjct: 392 APNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVE--PSVGTFNSVIGALCRLGDMDEA 449
Query: 417 W-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK--------GMGPDQR 467
W +L M +G + TY +L+ + + +E M KK + P+Q
Sbjct: 450 WKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ- 508
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKL 527
+++ +I GL ++ A++ E+R + P + + D ++ E GK + +
Sbjct: 509 AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 568
Query: 528 TSLGL 532
+ +GL
Sbjct: 569 SKVGL 573
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 165/355 (46%), Gaps = 23/355 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM-------PDLVNEKTYGILLNRYAAAHMVEE 206
P F+A++ AR+ E ++++ E+ PD+V TY L++ + + +E+
Sbjct: 146 PDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVV---TYTALIDGFCKSGNLEK 202
Query: 207 A---IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNI 262
A +GV + RK + ++ + +LL LC+ ++ A F ++ ++ T
Sbjct: 203 AMKMLGVMEGRKC---VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTT 259
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++G C V A+ ++ + C PD+V+Y ++ + G++ A +LF+ M K
Sbjct: 260 LIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKS 319
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR-GCLPNVTTYNSLIKHLCKIKRMETV 381
PD +T C++ C R+ EA +L MK G P+V TY+ ++ + KR
Sbjct: 320 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 379
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVIL 438
E++ EM +N + PN +T++ L+ L K V VL+ M + S T+N ++
Sbjct: 380 AEFIQEMIARNVA--PNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVI 437
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
D+ M G+ P +YT ++ G GR+E A F MR
Sbjct: 438 GALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 492
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 164/412 (39%), Gaps = 57/412 (13%)
Query: 107 GEIEKALNQCELTLTDDLIVNVINRYRF--------DWEAAYTFFKWVSREGDYSPGSNV 158
G +EKA+ + + NV+ D + A F+ ++ +G P
Sbjct: 198 GNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG-CVPNVVT 256
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+ ++ L A + + DEM PD V +Y LL+ Y +EEA +F
Sbjct: 257 YTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTV---SYNALLDGYCRLGRIEEAKQLFK 313
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIILNGWCVL 270
L D + L+ C +E A E+ K G D + T +I++ G+
Sbjct: 314 EMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRA 373
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
EA F +++I P++VTY++ ++ L K G++ A+ + + M K +P V T
Sbjct: 374 KRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTF 433
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +I ALC + EA ++L M G P + TY +L++ + RME YE + M +
Sbjct: 434 NSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRK 493
Query: 391 KNGSC-----LPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
K L E F+ L++ L K E+
Sbjct: 494 KAKKSSSAANLVPEQAFSALIRGLCKAREI------------------------------ 523
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
DK EE+ + P + ++ GL GR E+A + + G+
Sbjct: 524 --DKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 106/253 (41%), Gaps = 42/253 (16%)
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE-------------------------- 320
+C+P VT+ ++ K +L AL F+ M E
Sbjct: 2 ECQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAY 61
Query: 321 ---------KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR-GCLPNVTTYNSLIK 370
K PD+VT + +I+ C + + A E+LREM R G P+V TY S++
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL----ERMERNG 426
LC+ +M+ E + EM+ K P++ TF+ L+ +V L E + +
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVE--PDKFTFSALITGWCNARKVDEALKLYKEILTSSS 179
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
K TY ++ + +K ME + P+ +Y+ ++HGL G L+ AL
Sbjct: 180 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 239
Query: 487 SYFHEMRLKGMVP 499
F M KG VP
Sbjct: 240 DLFRRMTSKGCVP 252
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 182/420 (43%), Gaps = 63/420 (15%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F + R P F +++ L R R VE + + D M PD + TYG
Sbjct: 170 ALDLFHQICR-----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQI---TYG 221
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGEL-DDLSAFQNLLLWLCR-YKHVEVAETFFESEK 250
++ A+ + + +E + ++ + ++ LC+ +H + F E +
Sbjct: 222 TFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQD 281
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+I T N ++ G+C+ G A+R +++++ K P+ VTY +NA K+GK
Sbjct: 282 KGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFE 341
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L+ M +G P+ +T N +ID C + R+ A ++ M +GC P+V T+ +LI
Sbjct: 342 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 401
Query: 371 HLCKIKRMETVYEYLDEMEQK-------------NGSCL--------------------P 397
C KR++ E L EM ++ +G CL P
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 461
Query: 398 NEITFNYLLKSL---KKPEEVPWVLERMER-----------NGCKMSTDTYNVILKLYVN 443
+ +T N LL L K ++ + + M++ NG + TYN+++ +N
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 521
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +EEM +G+ PD +Y+ MI GL + RL++A F M K P T
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 581
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 173/378 (45%), Gaps = 21/378 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
W AA + + E SP +NA+++ + +F E +++DEM + N TY
Sbjct: 304 WSAAQRLLQEM-LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYN 362
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
+++ + ++ A +F G D+ F L+ C K ++ E E +
Sbjct: 363 SMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRR 422
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N +++G+C++G++ A + +I S PD VT T ++ L GKL A
Sbjct: 423 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 482
Query: 312 LRLFQAMWEK-----------GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L +F+AM + G +PDV+T N +I L + + EA E+ EM +RG +P
Sbjct: 483 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE 420
+ TY+S+I LCK R++ + M K+ S PN +TFN L+ K V LE
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFS--PNVVTFNTLINGYCKAGRVDDGLE 600
Query: 421 ---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
M R G Y ++ + + ++EM G+ PD + M+ G +
Sbjct: 601 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFW 660
Query: 478 DKGRLEDALSYFHEMRLK 495
K LE A++ ++++
Sbjct: 661 SKEELERAVAMLEDLQMS 678
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 140/340 (41%), Gaps = 53/340 (15%)
Query: 222 DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D+ +F L+ C + A TF + K D+ T +L+G C+ V EA +
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
I C PD +T+ T +N L ++G++ A+ L M E G +PD +T +D +C
Sbjct: 175 HQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKM 230
Query: 341 KRIPEALEVLR------------------------------------EMKNRGCLPNVTT 364
AL +LR EM+++G PN+ T
Sbjct: 231 GDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVT 290
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLER 421
YN +I C R L EM ++ S PN +T+N L+ + K E + +
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKIS--PNVVTYNALINAFVKEGKFFEAAELYDE 348
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M G +T TYN ++ + D D + M KG PD ++T +I G R
Sbjct: 349 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 408
Query: 482 LEDALSYFHEMRLKGMVPEPRT-------GILVNDMNIKL 514
++D + HEM +G+V T LV D+N L
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAAL 448
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 11/263 (4%)
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+AE + E E G+ +++ + + + G + +A + D+++S+ P + + +
Sbjct: 31 LAEKSRDGESGEAGFRGESLKLRSGSYEIKG-LEDAIDLFSDMLRSRPLPSVIDFNKLMG 89
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A+ + + + L+Q M K + D+ + +I C ++P AL ++ G P
Sbjct: 90 AVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHP 149
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPW 417
+V T+ +L+ LC R V E LD Q C P+ +TF L+ L + E
Sbjct: 150 DVVTFTTLLHGLCLDHR---VSEALDLFHQ---ICRPDVLTFTTLMNGLCREGRVVEAVA 203
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGL 476
+L+RM NG + TY + + +ME+ + P+ Y+ +I GL
Sbjct: 204 LLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGL 263
Query: 477 YDKGRLEDALSYFHEMRLKGMVP 499
GR D+ + F EM+ KG+ P
Sbjct: 264 CKDGRHSDSHNLFIEMQDKGIFP 286
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 119/313 (38%), Gaps = 51/313 (16%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+AA F ++ +G SP F ++D A+R + +++ EMP + N TY
Sbjct: 375 DAAEDMFYLMATKG-CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK--- 250
L++ + + A+ + + G D+ LL LC ++ A F++ +
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 251 ---------NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY------ 295
N D+ T NI++ G G EA+ ++++ PD++TY
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 296 -----------------------------ATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
T +N K G++ L LF M +G D
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+ +I I AL++ +EM + G P+ T +++ + +E L+
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673
Query: 387 EMEQKNGSCLPNE 399
+++ G L +E
Sbjct: 674 DLQMSVGYQLEDE 686
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 168/355 (47%), Gaps = 9/355 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP S F +++D LGR R + ++++M D + N Y L+ + E+
Sbjct: 479 SPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHK 538
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWC 268
++ G DL + + + + VE FE K + D+++ +I+++G
Sbjct: 539 IYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLV 598
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G E + + ++ + D + Y T ++ K GK+ A +L + M KG +P VV
Sbjct: 599 KAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVV 658
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T ++D L R+ EA + E K+ G NV Y+SLI K+ R++ Y L+E+
Sbjct: 659 TYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEEL 718
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILKLYVNWD 445
QK + PN T+N LL +L K EE+ + M+ C + TY++++
Sbjct: 719 MQKGLT--PNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIR 776
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+K W+EM+K+G+ P+ +YT MI GL G + +A F + G VP+
Sbjct: 777 KFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPD 831
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 193/451 (42%), Gaps = 50/451 (11%)
Query: 95 QNILKTCSVSTKG----EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
+ + C V G ++E+ALN + ++IV V+ R + D A+ +F+WV R+
Sbjct: 69 KTVYDLCGVLENGLWGPDVEEALNVFDEMSQPEVIVGVMKRLK-DVNVAFQYFRWVERKT 127
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMP------------DLVNE---------- 188
+ V+NA L V+ R R L Q+ +EM +LV
Sbjct: 128 QQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEA 187
Query: 189 ----------------KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
Y L+ +AA+ + + +F + +E G ++ F L+
Sbjct: 188 FGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRV 247
Query: 233 LCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
R ++ A + E + N F D+ N+ ++ + +G V A +F+ ++ PD
Sbjct: 248 FAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPD 307
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
VTY T + L K +L A+ LF+ + P V N +I + EA +L
Sbjct: 308 DVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLE 367
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
K +GC+P+V YN ++ L + ++E DEM Q PN T+N L+ L K
Sbjct: 368 RQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA---PNLTTYNILIDMLCK 424
Query: 412 PEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
E+ L + M+ G + T N+++ D+ + ++ K PD R+
Sbjct: 425 AGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRT 484
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +I GL +GR++DA S + +M +P
Sbjct: 485 FCSLIDGLGRRGRVDDAYSLYEKMLDSDQIP 515
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 171/370 (46%), Gaps = 11/370 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNE----KTYG 192
+ A+ FF + +G P + ++ VL +ARR E +++F+E+ DL Y
Sbjct: 290 DMAWKFFHEMKAQG-LVPDDVTYTTLIGVLCKARRLDEAVELFEEL-DLNRSVPCVYAYN 347
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
++ Y +A +EA + +R+K G + + A+ +L L R VE A + + +
Sbjct: 348 TMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQD 407
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
++ T NI+++ C G + A + + ++ P+ +T ++ L K KL A
Sbjct: 408 AAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEAC 467
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+F + K PD T +ID L + R+ +A + +M + +PNV Y SLI++
Sbjct: 468 SIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNF 527
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKM 429
K R E ++ EM + C P+ + N + + K EV + E ++ G
Sbjct: 528 FKCGRKEDGHKIYKEMVHR--GCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVP 585
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+Y++++ V + + EM+++G+ D +Y +I G G+++ A
Sbjct: 586 DVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLL 645
Query: 490 HEMRLKGMVP 499
EM+ KG+ P
Sbjct: 646 EEMKTKGLQP 655
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 178/393 (45%), Gaps = 15/393 (3%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-----PDLVNEKT 190
++ AY+ + R+G P +N IL LGR + E +++ DEM P+L T
Sbjct: 359 FDEAYSLLERQKRKG-CIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLT---T 414
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESE 249
Y IL++ A +E A+ V D KE G ++ ++ LC+ + + E F +
Sbjct: 415 YNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLD 474
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
D +T +++G G V +A ++ ++ S P+ V Y + + K G+
Sbjct: 475 HKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKE 534
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
++++ M +G PD++ N +D + + + + E+K +G +P+V +Y+ LI
Sbjct: 535 DGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILI 594
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNG 426
L K Y+ EM+++ + + +N ++ K +V +LE M+ G
Sbjct: 595 HGLVKAGFSRETYKLFYEMKEQGLHL--DVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKG 652
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ + TY ++ D D+ +EE + G+ + Y+ +I G GR+++A
Sbjct: 653 LQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAY 712
Query: 487 SYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
E+ KG+ P T + D +K +E E
Sbjct: 713 LILEELMQKGLTPNSYTWNCLLDALVKAEEIDE 745
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 170/410 (41%), Gaps = 62/410 (15%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVI-------NRYRFDW-EAAYTFFKWVSREGDYSPGSN 157
+G ++ A + E L D I NV+ N ++ E + +K + G SP
Sbjct: 495 RGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRG-CSPDLM 553
Query: 158 VFNAILDVLGRA------RRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
+ N+ +D + +A R E I+ +PD+ ++Y IL++ A E +F
Sbjct: 554 LLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDV---RSYSILIHGLVKAGFSRETYKLF 610
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVL 270
KE G D+ A+ ++ C+ V+ A E K + + T +++G +
Sbjct: 611 YEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKI 670
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
+ EA +++ + + V Y++ ++ K G++ A + + + +KG P+ T
Sbjct: 671 DRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTW 730
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
NC++DAL + I EA + MKN C PN TY+ +I LC I++ + + EM Q
Sbjct: 731 NCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEM-Q 789
Query: 391 KNGSCLPNEITFNYLLKSLKK--------------------PEEVPW------------- 417
K G PN IT+ ++ L K P+ +
Sbjct: 790 KQG-LKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKA 848
Query: 418 -----VLERMERNGCKMSTDTYNVILKLYVNWDCEDK---VRHTWEEMEK 459
V E GC++++ T V+L DC ++ V EM K
Sbjct: 849 MDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLREMAK 898
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 156/317 (49%), Gaps = 6/317 (1%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR-YKHVEVAETFFESE 249
Y I+++ ++A+ +F+ + G D+ + +L+ LC K + A+ E
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
D+ T + +++ + G + EAK + ++I PD++TY + ++ K+ L
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A ++F M KG +PD+VT + +I++ C KR+ + + + RE+ ++G +PN TYN+L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNG 426
C+ ++ E EM + P+ +T+ LL L E+ L E+M+++
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVP--PSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ YN+I+ N D + + KG+ PD +Y VMI GL KG L +A
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 487 SYFHEMRLKGMVPEPRT 503
F +M+ G P+ T
Sbjct: 546 MLFRKMKEDGCTPDDFT 562
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 150/321 (46%), Gaps = 12/321 (3%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR----YKHVEVAETF 245
T I++N Y + A V R + G D F L+ C + V + +
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E ++ D+ T++ ++NG C+ G V EA +++ +PD VTY +N L K
Sbjct: 167 VEMKQRP---DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G AL LF+ M E+ K VV + +ID+LC +AL + EM+ +G +V TY
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERM 422
+SLI LC + + + L EM +N +P+ +TF+ L+ K E + M
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRN--IIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G T TYN ++ + +C + ++ M KG PD +Y+++I+ R+
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
+D + F E+ KG++P T
Sbjct: 402 DDGMRLFREISSKGLIPNTIT 422
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 12/245 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + +N+++D + E Q+FD M PD+V TY IL+N Y A V++
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV---TYSILINSYCKAKRVDD 403
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
+ +F G + + + L+L C+ + A E F E + T I+L+
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G + +A ++ + KS+ Y ++ + K+ A LF ++ +KG KP
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK-HLCKIKRMETVYEY 384
DVVT N +I LC K + EA + R+MK GC P+ TYN LI+ HL + +V E
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV-EL 582
Query: 385 LDEME 389
++EM+
Sbjct: 583 IEEMK 587
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 11/241 (4%)
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
F K + + E D T +N +K KL A + W+ G +PD +T + +++ C
Sbjct: 92 FCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFC 151
Query: 339 FKKRIPEALEV---LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
+ R+ EA+ + + EMK R P++ T ++LI LC R+ +D M +
Sbjct: 152 LEGRVSEAVALVDRMVEMKQR---PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQ- 207
Query: 396 LPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+E+T+ +L L K L+ +ME K S Y++++ D
Sbjct: 208 -PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNI 512
+ EME KG+ D +Y+ +I GL + G+ +D EM + ++P+ T + D+ +
Sbjct: 267 LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 326
Query: 513 K 513
K
Sbjct: 327 K 327
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 99/216 (45%), Gaps = 11/216 (5%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILL 195
F+ +S +G P + +N ++ ++ + ++F EM P +V TYGILL
Sbjct: 407 LFREISSKG-LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV---TYGILL 462
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FG 254
+ + +A+ +F++ ++ + + ++ +C V+ A + F S ++
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ T N+++ G C G++ EA ++ + + C PD TY + A L +++ L
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 582
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+ M G D T +ID L ++ L++L
Sbjct: 583 IEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 151/315 (47%), Gaps = 8/315 (2%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
+G +L I +F R + G + L+ C + + A + F ++
Sbjct: 52 FGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVF-AKI 110
Query: 251 NEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ GY DI T ++ G C+ G V E+ F ++ + D V+Y T +N L K G+
Sbjct: 111 LKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQT 170
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
G ALRL + + + +PDVV N IID LC K + +A ++ EM + PNV TY SL
Sbjct: 171 GPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSL 230
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN 425
I C + +++ + L+EM KN + PN TFN L+ L K E ++ M +
Sbjct: 231 IYGFCIVGQLDKAFGLLNEMVLKNVN--PNVCTFNTLVDGLCKEGKMREAKSLVAVMMKE 288
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G TYN ++ Y K ++ + M + G+ D SY+VMI GL L++A
Sbjct: 289 GVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEA 348
Query: 486 LSYFHEMRLKGMVPE 500
+ F MR + ++P+
Sbjct: 349 MDLFEGMRNENVIPD 363
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 155/352 (44%), Gaps = 9/352 (2%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
F IL L + + + +I +F M N T IL+N Y + A VF +
Sbjct: 52 FGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKIL 111
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVY 274
+ G D+ + L+ LC V+ + F + ++ D + ++NG C +G
Sbjct: 112 KLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTG 171
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
A R + I C PD V Y T ++ L K + A L+ M+EK P+VVT +I
Sbjct: 172 PALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLI 231
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
C ++ +A +L EM + PNV T+N+L+ LCK +M + M ++
Sbjct: 232 YGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVG 291
Query: 395 CLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
P+ T+N L+ +K+ + V M + G +Y+V++ D+
Sbjct: 292 --PDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAM 349
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+E M + + PD +Y+ +I GL GR+ AL Y EM +G P T
Sbjct: 350 DLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVIT 401
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 188/411 (45%), Gaps = 57/411 (13%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGIL 194
+A++ F + + G Y P + ++ L + E + D + ++ +YG L
Sbjct: 102 SAFSVFAKILKLG-YQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTL 160
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGEL--DDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
+N A+ + RK GE+ D+ + ++ LC+ K V A + + E +
Sbjct: 161 INGLCKIGQTGPALRLL--RKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEK 218
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
++ T ++ G+C++G + +A +++ P+ T+ T V+ L K+GK+ A
Sbjct: 219 RVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREA 278
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDA----------------------------------- 336
L M ++G PDV T N ++D
Sbjct: 279 KSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISG 338
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
L K + EA+++ M+N +P+V Y+SLI LCK R+ + +Y+DEM +
Sbjct: 339 LSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQP-- 396
Query: 397 PNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCED----K 449
PN IT+ L+ +L K +V +L++++ G + + TYN++ V+ C+D
Sbjct: 397 PNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNIL----VDGLCKDGRLTD 452
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ ++++ KG D +Y++MI+GL + ++AL+ +M KG VP+
Sbjct: 453 AQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPD 503
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 160/349 (45%), Gaps = 15/349 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++N I+D L + + + ++ EM P++V TY L+ + +++A
Sbjct: 187 PDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVV---TYTSLIYGFCIVGQLDKA 243
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
G+ + ++ F L+ LC+ + A++ E G D+ T N +++G
Sbjct: 244 FGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDG 303
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ ++ +AK + + + D +Y+ ++ L+K L A+ LF+ M + PD
Sbjct: 304 YFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPD 363
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VV + +ID LC RI AL+ + EM +RG PNV TY SLI LCK +++ L
Sbjct: 364 VVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLK 423
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
++ K+ N T+N L+ L K + V + + G + TY++++
Sbjct: 424 KI--KDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCK 481
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
D+ +ME KG PD +Y +I+ ++K + A EM
Sbjct: 482 ESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 115/241 (47%), Gaps = 13/241 (5%)
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
L N+ +A + +++ + P + + + +L K + LFQ M G + + +T
Sbjct: 27 LPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYIT 86
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I++ C ++I A V ++ G P++ TY +LI+ LC +++ + D +
Sbjct: 87 LNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLV 146
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ + +++ L+ L K + +L ++E C+ YN I ++ C
Sbjct: 147 SQGIKL--DHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTI----IDGLC 200
Query: 447 EDK-VRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+DK VR ++ EM +K + P+ +YT +I+G G+L+ A +EM LK + P
Sbjct: 201 KDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVC 260
Query: 503 T 503
T
Sbjct: 261 T 261
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 157/335 (46%), Gaps = 9/335 (2%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L A + +E + P++V Y L+ YA+ +EEA + D G D+
Sbjct: 166 LSLANKLLEKMTFSGLKPNVV---VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFC 222
Query: 226 FQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ ++ L + +E A T+ E + D T + G+ G + EA +++ +++
Sbjct: 223 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 282
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
P++ Y +N K G L AL +F+ + G PDV TC+ I L R+
Sbjct: 283 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 342
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EAL+V E+K +G +P+V TY+SLI CK +E +E DEM K + PN +N
Sbjct: 343 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA--PNIFIYNA 400
Query: 405 LLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ L K ++ + + M G + + TY+ ++ Y + + + EM KG
Sbjct: 401 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 460
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ P Y ++HG +G +E A++ F EM KG
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 495
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 181/427 (42%), Gaps = 38/427 (8%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
E A T+ + G P + F A + + + E + FDEM D + N Y
Sbjct: 236 MEEASTYLLEIQGRG-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 294
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
+L+N + A + EA+ +F G L D+ + L + V+ A F SE E
Sbjct: 295 VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF-SELKE 353
Query: 253 FGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
G D+ T + +++G+C G V +A ++ P+ Y V+ L K G +
Sbjct: 354 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 413
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A +LF M EKG +PD VT + +ID C + + EA + EM ++G P+ YN+L+
Sbjct: 414 ARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVH 473
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGC 427
CK ME EM QK ++FN L+ K +E + + M
Sbjct: 474 GCCKEGDMEKAMNLFREMLQKG---FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 530
Query: 428 KMSTDTYNVILKLYVNWDCE---------------------DKVRHTWEEMEKKGMGPDQ 466
TY + ++W C+ D V +E+M KG+ PD+
Sbjct: 531 MPDHVTYTTV----IDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDE 586
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK 526
+Y ++I+ + L +A E+ KGM+ + L+ K ++ E K + +
Sbjct: 587 VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDE 646
Query: 527 LTSLGLK 533
+ LGLK
Sbjct: 647 MGELGLK 653
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 157/358 (43%), Gaps = 11/358 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTY---GILLNRYAAAHMVEEAIGV 210
P + + I L RA+R E F+EM + Y L++ + ++E + +
Sbjct: 8 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 67
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWC 268
D G +L + L+ LC++ +E A + G + +T +++ G+C
Sbjct: 68 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT-LGCKPNSRTFCLLIEGYC 126
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
N+ A ++ K P +V+Y +N L L A +L + M G KP+VV
Sbjct: 127 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 186
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+ +I + RI EA +L M G P++ YN++I L K +ME YL E+
Sbjct: 187 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 246
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ + P+ +TF + K E + M +G + Y V++ +
Sbjct: 247 QGRGLK--PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 304
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + + G+ PD ++ + IHGL GR+++AL F E++ KG+VP+ T
Sbjct: 305 NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 362
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 135/282 (47%), Gaps = 9/282 (3%)
Query: 233 LCRYKHVEVAE-TFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP- 290
LCR K + A+ TF E +K D + +++G+ G++ E R KD++ S P
Sbjct: 20 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI-KDVMVSCGIPI 78
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+ +TY ++ L K GK+ A + + M G KP+ T +I+ C + + ALE+L
Sbjct: 79 NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 138
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL---K 407
EM+ R +P+ +Y ++I LC K + + L++M PN + ++ L+
Sbjct: 139 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK--PNVVVYSTLIMGYA 196
Query: 408 SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
S + EE +L+ M +G YN I+ ++ E++ +G+ PD
Sbjct: 197 SEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAV 256
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP-EPRTGILVN 508
++ I G G++ +A YF EM G++P P +L+N
Sbjct: 257 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 298
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 166/425 (39%), Gaps = 42/425 (9%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
T T +I + R + EA TF + ++ P N +A++D R E++++
Sbjct: 10 TYTYTIITAGLCRAKRMNEAKLTFEEM--QKTGLKPDYNACSALIDGFMREGDIDEVLRI 67
Query: 179 FDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
D M +N TY +L++ +E+A + G + F L+ CR
Sbjct: 68 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 127
Query: 236 YKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
++ A E E EK + ++NG C ++ A + + + S +P+ V
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 187
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y+T + +G++ A RL M G PD+ N II L ++ EA L E++
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 247
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK-------------NG-------- 393
RG P+ T+ + I K +M +Y DEM NG
Sbjct: 248 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 307
Query: 394 ------------SCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVIL 438
LP+ T + + L K +E V ++ G TY+ ++
Sbjct: 308 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 367
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ +K +EM KG+ P+ Y ++ GL G ++ A F M KG+
Sbjct: 368 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 427
Query: 499 PEPRT 503
P+ T
Sbjct: 428 PDSVT 432
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 143/353 (40%), Gaps = 54/353 (15%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIG 209
+P ++NA++D L ++ ++FD MP+ E TY +++ Y + V EA
Sbjct: 392 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 451
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCV 269
+F G + L+ C+ +E A F + + N +++G+C
Sbjct: 452 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCK 511
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL-----------------GTAL 312
+ EA + ++++I + PD VTY T ++ K GK+ T
Sbjct: 512 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVF 571
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
LF+ M KG KPD VT +I A C + + EA ++ E+ +G L T ++ LI L
Sbjct: 572 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 631
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD 432
CK + + + LDEM + G K S
Sbjct: 632 CKREDLTEASKLLDEMGEL----------------------------------GLKPSLA 657
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
+ +++ + D+ +E ++ G+ PD + +++G + EDA
Sbjct: 658 ACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDA 710
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 9/187 (4%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M EKG P+ T I LC KR+ EA EM+ G P+ ++LI +
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 378 METVYEYLDEMEQKNGSC-LP-NEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
++ V D M SC +P N IT+N L+ L K E+ +L+ M GCK ++
Sbjct: 61 IDEVLRIKDVMV----SCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSR 116
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
T+ ++++ Y + +EMEK+ + P SY MI+GL L A +M
Sbjct: 117 TFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 176
Query: 493 RLKGMVP 499
G+ P
Sbjct: 177 TFSGLKP 183
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 125/308 (40%), Gaps = 41/308 (13%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRF-------------DWEAAYTFFKWVSREGDY 152
+GE+EKA L D++ + I F D + A F + +G
Sbjct: 373 QGEVEKAFE-----LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG-L 426
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
P S ++ ++D ++ E +F EMP + Y L++ +E+A+
Sbjct: 427 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 486
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWC 268
+F + G LS F L+ C+ + E ++ F E + D T +++ C
Sbjct: 487 LFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 545
Query: 269 VLGNVYEAKRFWKDI-----------------IKSKCEPDSVTYATFVNALTKKGKLGTA 311
G + EA +K++ + +PD VTY + A K+ L A
Sbjct: 546 KAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 605
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+L + KG + +I ALC ++ + EA ++L EM G P++ ++L++
Sbjct: 606 FKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRS 665
Query: 372 LCKIKRME 379
+ +M+
Sbjct: 666 FHEAGKMD 673
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 181/416 (43%), Gaps = 63/416 (15%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F + R P F +++ L R R VE + + D M PD + TYG
Sbjct: 170 ALDLFHQICR-----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQI---TYG 221
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGEL-DDLSAFQNLLLWLCR-YKHVEVAETFFESEK 250
++ A+ + + +E + ++ + ++ LC+ +H + F E +
Sbjct: 222 TFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQD 281
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+I T N ++ G+C+ G A+R +++++ K P+ VTY +NA K+GK
Sbjct: 282 KGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFE 341
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L+ M +G P+ +T N +ID C + R+ A ++ M +GC P+V T+ +LI
Sbjct: 342 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 401
Query: 371 HLCKIKRMETVYEYLDEMEQK-------------NGSCL--------------------P 397
C KR++ E L EM ++ +G CL P
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 461
Query: 398 NEITFNYLLKSL---KKPEEVPWVLERMER-----------NGCKMSTDTYNVILKLYVN 443
+ +T N LL L K ++ + + M++ NG + TYN+++ +N
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 521
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +EEM +G+ PD +Y+ MI GL + RL++A F M K P
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 577
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 172/376 (45%), Gaps = 21/376 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
W AA + + E SP +NA+++ + +F E +++DEM + N TY
Sbjct: 304 WSAAQRLLQEM-LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYN 362
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
+++ + ++ A +F G D+ F L+ C K ++ E E +
Sbjct: 363 SMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRR 422
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N +++G+C++G++ A + +I S PD VT T ++ L GKL A
Sbjct: 423 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 482
Query: 312 LRLFQAMWEK-----------GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L +F+AM + G +PDV+T N +I L + + EA E+ EM +RG +P
Sbjct: 483 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE 420
+ TY+S+I LCK R++ + M K+ S PN +TFN L+ K V LE
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFS--PNVVTFNTLINGYCKAGRVDDGLE 600
Query: 421 ---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
M R G Y ++ + + ++EM G+ PD + M+ G +
Sbjct: 601 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFW 660
Query: 478 DKGRLEDALSYFHEMR 493
K LE A++ +++
Sbjct: 661 SKEELERAVAMLEDLQ 676
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 140/340 (41%), Gaps = 53/340 (15%)
Query: 222 DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D+ +F L+ C + A TF + K D+ T +L+G C+ V EA +
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
I C PD +T+ T +N L ++G++ A+ L M E G +PD +T +D +C
Sbjct: 175 HQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKM 230
Query: 341 KRIPEALEVLR------------------------------------EMKNRGCLPNVTT 364
AL +LR EM+++G PN+ T
Sbjct: 231 GDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVT 290
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLER 421
YN +I C R L EM ++ S PN +T+N L+ + K E + +
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKIS--PNVVTYNALINAFVKEGKFFEAAELYDE 348
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M G +T TYN ++ + D D + M KG PD ++T +I G R
Sbjct: 349 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 408
Query: 482 LEDALSYFHEMRLKGMVPEPRT-------GILVNDMNIKL 514
++D + HEM +G+V T LV D+N L
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAAL 448
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 11/263 (4%)
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+AE + E E G+ +++ + + + G + +A + D+++S+ P + + +
Sbjct: 31 LAEKSRDGESGEAGFRGESLKLRSGSYEIKG-LEDAIDLFSDMLRSRPLPSVIDFNKLMG 89
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A+ + + + L+Q M K + D+ + +I C ++P AL ++ G P
Sbjct: 90 AVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHP 149
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPW 417
+V T+ +L+ LC R V E LD Q C P+ +TF L+ L + E
Sbjct: 150 DVVTFTTLLHGLCLDHR---VSEALDLFHQ---ICRPDVLTFTTLMNGLCREGRVVEAVA 203
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGL 476
+L+RM NG + TY + + +ME+ + P+ Y+ +I GL
Sbjct: 204 LLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGL 263
Query: 477 YDKGRLEDALSYFHEMRLKGMVP 499
GR D+ + F EM+ KG+ P
Sbjct: 264 CKDGRHSDSHNLFIEMQDKGIFP 286
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/304 (19%), Positives = 116/304 (38%), Gaps = 51/304 (16%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+AA F ++ +G SP F ++D A+R + +++ EMP + N TY
Sbjct: 375 DAAEDMFYLMATKG-CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK--- 250
L++ + + A+ + + G D+ LL LC ++ A F++ +
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 251 ---------NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY------ 295
N D+ T NI++ G G EA+ ++++ PD++TY
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 296 -----------------------------ATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
T +N K G++ L LF M +G D
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+ +I I AL++ +EM + G P+ T +++ + +E L+
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673
Query: 387 EMEQ 390
++++
Sbjct: 674 DLQR 677
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 189/382 (49%), Gaps = 15/382 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A++ + + G Y P + FN ++ L + E + D + L +++ +YG L+
Sbjct: 122 AFSMMAKILKMG-YEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLI 180
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSA--FQNLLLWLCRYKHV-EVAETFFESEKNE 252
N A+ + RK G+L ++ + ++ LC++K V + E + + +
Sbjct: 181 NGLCKIGETRTALQML--RKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKK 238
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D+ T + ++ G+C++G + EA +++++ PD T+ V+AL K+G L A
Sbjct: 239 ISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAK 298
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ M ++G P+VVT + ++D C ++ +A VL + G PN +Y ++I
Sbjct: 299 NMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGF 358
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKM 429
CKIK ++ ++M+ K + P+++T+N L+ L K + + +++ M NG
Sbjct: 359 CKIKMVDEALSLFNDMQFKGIA--PDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPA 416
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ TYN ++ D+ ++++ +G+ PD ++ ++I+GL GRL++A F
Sbjct: 417 NIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVF 476
Query: 490 HEMRLKGMVPEPRT-GILVNDM 510
++ KG T I+VN +
Sbjct: 477 QDLLSKGYSVNAWTYNIMVNGL 498
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 176/377 (46%), Gaps = 17/377 (4%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
++N I+D L + + ++ +++ +M PD+V T+ L+ + +EEA G+F
Sbjct: 210 MYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVV---TFSALIYGFCIVGQLEEAFGLF 266
Query: 212 DRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
R ++ D F L+ LC+ +++ A+ E ++ T + +++G+C+
Sbjct: 267 -REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCL 325
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ V +AK I + P++ +Y T +N K + AL LF M KG PD VT
Sbjct: 326 VNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVT 385
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +ID LC RI A E++ EM + G N+ TYN LI LCK ++ + ++
Sbjct: 386 YNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI- 444
Query: 390 QKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
K+ P+ TFN L+ L K + V + + G ++ TYN+++
Sbjct: 445 -KDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGL 503
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGIL 506
D+ +M+ G+ PD +Y +I L+ K E A EM + +V +
Sbjct: 504 FDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEGLEM 563
Query: 507 VNDMNIKLKERGEQGKK 523
V + + K++ + GKK
Sbjct: 564 VLHLESEAKDQEKFGKK 580
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 148/326 (45%), Gaps = 46/326 (14%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+ T+ IL+N Y HM E S +L
Sbjct: 101 PDIF---TFNILINCY--CHMAEMNFA-------------FSMMAKIL------------ 130
Query: 243 ETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ GY D T N ++ G C+ G V EA F ++ D +Y T +N
Sbjct: 131 ---------KMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLIN 181
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K G+ TAL++ + + K K +VV N IID+LC K + +A E+ +M + P
Sbjct: 182 GLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISP 241
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW--- 417
+V T+++LI C + ++E + EM KN + P+ TFN L+ +L K +
Sbjct: 242 DVVTFSALIYGFCIVGQLEEAFGLFREMVLKNIN--PDYYTFNILVDALCKEGNLKGAKN 299
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+L M + G + TY+ ++ Y + +K +H + + G P+ SY MI+G
Sbjct: 300 MLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFC 359
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRT 503
+++ALS F++M+ KG+ P+ T
Sbjct: 360 KIKMVDEALSLFNDMQFKGIAPDKVT 385
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 110/239 (46%), Gaps = 4/239 (1%)
Query: 154 PGSNVFNAILD---VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +++++D ++ + + ++ +M N +Y ++N + MV+EA+ +
Sbjct: 311 PNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSL 370
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCV 269
F+ + G D + +L+ LC+ + A E E N +I T N +++ C
Sbjct: 371 FNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCK 430
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+V +A K I +PD T+ + L K G+L A +FQ + KG + T
Sbjct: 431 NHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWT 490
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
N +++ LC + EA +L +M + G +P+ TY +LI+ L E + L EM
Sbjct: 491 YNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREM 549
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 113/250 (45%), Gaps = 11/250 (4%)
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGK--LGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+ ++++K + + + +L K TA+ L + + G PD+ T N +I+
Sbjct: 54 FNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCY 113
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C + A ++ ++ G P+ T+N+LIK LC +++ + D +
Sbjct: 114 CHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHL-- 171
Query: 398 NEITFNYLLKSLKKPEEVPWVLERMER-NG--CKMSTDTYNVILKLYVNWDCEDKVRHTW 454
++ ++ L+ L K E L+ + + +G K++ YN I+ +
Sbjct: 172 DQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELY 231
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIK 513
+M K + PD +++ +I+G G+LE+A F EM LK + P+ T ILV+ +
Sbjct: 232 SQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDAL--- 288
Query: 514 LKERGEQGKK 523
KE +G K
Sbjct: 289 CKEGNLKGAK 298
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 180/388 (46%), Gaps = 28/388 (7%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D +AA + ++ G +P + A++D L +ARR + IQ M PDLV
Sbjct: 25 DLDAAQALLQKMADAG-CAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLV-- 81
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY L++ A+ +++A V G + + L++W CR + ++ A
Sbjct: 82 -TYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIR- 139
Query: 249 EKNEFGYDIKTMNIILNGWCVLG--------NVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
E N+++ C+ G + YE R ++I+S PD VTY TF++
Sbjct: 140 ---EMILRGSVCNLVVYIDCIFGFCEARCQSSRYEC-RDGDEMIESGRIPDVVTYNTFIS 195
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K GKL L + + M G PDVVT II LC RI +A +V + M RGC+P
Sbjct: 196 GLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVP 255
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW--- 417
+ TY+ ++ +L + R++TV E L+ M+ C+ T N + +L + + P
Sbjct: 256 DSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKN 315
Query: 418 VLERMERNGCKMSTDTYN-VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
+L M +G + +YN VI L + + +D + + + ++ PD + +I G
Sbjct: 316 ILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGF 375
Query: 477 YDKGRLEDALSYFHEMRLKGM-VPEPRT 503
GRL A EM+ K + VP+ T
Sbjct: 376 CKAGRLSQAHQLLIEMKAKNICVPDVVT 403
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 140/297 (47%), Gaps = 10/297 (3%)
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVL 270
D E G + D+ + + LC+ ++ E E ++ D+ T I++G C
Sbjct: 176 DEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKA 235
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA---LRLFQAMWEKGRKPDV 327
+ +A + +K +++ C PDS+TY+ ++ L++ +L T L QAM + G +V
Sbjct: 236 NRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAM-KAGCVMEV 294
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T N I ALC + P A +L M G LPN+ +YN +I LCK ++ ++ +
Sbjct: 295 YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 354
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVP----WVLERMERNGCKMSTDTYNVILKLYVN 443
M +G C P+ I FN L+ K + ++E +N C TYN ++
Sbjct: 355 M-LDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSK 413
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ + + +EM+ G P+ +Y +I+G G E+A S F EM KG P+
Sbjct: 414 FGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPD 470
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 159/370 (42%), Gaps = 13/370 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL-----VNEKTYGI 193
A+ FK + G P S ++ +LD L RA R + +V + M + + T+
Sbjct: 241 AFQVFKGMLERG-CVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNA 299
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKN 251
+ + A + E G L +L ++ ++ LC+ +V+ A +
Sbjct: 300 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 359
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI-IKSKCEPDSVTYATFVNALTKKGKLGT 310
D+ N +++G+C G + +A + ++ K+ C PD VTY T ++ +K G L
Sbjct: 360 CCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQ 419
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L Q M G KP+VVT +I+ EA + EM +GC P++ TYN+++
Sbjct: 420 AKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLS 479
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGC 427
K M +++ K C P+ IT+ L+ + E+ +L+ M G
Sbjct: 480 AFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGW 539
Query: 428 KMSTDTYNVIL-KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ TYNV++ KL + K +++M + P + ++ G + A
Sbjct: 540 SCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSAR 599
Query: 487 SYFHEMRLKG 496
S EM KG
Sbjct: 600 SMVQEMNEKG 609
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 5/255 (1%)
Query: 254 GYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
GYD + T +++G C G++ A+ + + + C P+ VTY ++ L K + A
Sbjct: 5 GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA 64
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++ + M G +PD+VT N +I LC R+ +A VL+E+ G PN TY++L+
Sbjct: 65 IQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIW 124
Query: 372 LCKIKRMETVYEYLDEMEQKNGSC---LPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
C+ +R++ + EM + C + + F + + + M +G
Sbjct: 125 NCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRI 184
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TYN + DK EEM++ G+ PD ++ +I GL R++DA
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244
Query: 489 FHEMRLKGMVPEPRT 503
F M +G VP+ T
Sbjct: 245 FKGMLERGCVPDSLT 259
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 42/226 (18%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M G VVT +ID LC + A +L++M + GC PNV TY +LI LCK +R
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTY 434
+ + M + C P+ +T+N L+ L + ++ VL+ + RNG + TY
Sbjct: 61 PHDAIQTVKRMLRSG--CEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITY 118
Query: 435 NVI----------------------------LKLYVNWD---CEDKVRHT------WEEM 457
+ + L +Y++ CE + + + +EM
Sbjct: 119 STLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEM 178
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ G PD +Y I GL G+L+ L EM G+ P+ T
Sbjct: 179 IESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVT 224
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 84/219 (38%), Gaps = 48/219 (21%)
Query: 154 PGSNVFNAILD------VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P +N ++D L +A+ ++ +Q P++V TY L+N YA M EEA
Sbjct: 399 PDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVV---TYAALINGYAKHGMYEEA 455
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY---DIKTMNIIL 264
+FD G D+ + +L + + AE ++ KN+ Y D T I++
Sbjct: 456 ESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILI 515
Query: 265 NGWC-----------------------------VLGNVYE-------AKRFWKDIIKSKC 288
+G+C ++ + E A ++ ++ C
Sbjct: 516 DGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDC 575
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
P + + + V + G + +A + Q M EKG D
Sbjct: 576 VPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDA 614
>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
Length = 484
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 172/392 (43%), Gaps = 18/392 (4%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
L L+ +VI R A FF W S++ Y + +L L RARR E ++ F
Sbjct: 9 LEPRLVGSVIRRVP-SLALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFF 67
Query: 180 DE------MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
P L ++ I++ + A + G D++A+ +L
Sbjct: 68 KRELCAHCRPSLY---SFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGY 124
Query: 234 CRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
C V A F ++ T N ++NG C G + A + + +PD
Sbjct: 125 CDLGRVGRALIKFGKMGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGF 184
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY+T V+ L + +L A++++ M E D N + D C ++R+ EALEVL+ M
Sbjct: 185 TYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTM 244
Query: 354 KNRGCLPNVTTYNSLIKHLCKIK-RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
R C P+V TYN +I +C+ K R+E Y +M + C PN +T+ ++ L K
Sbjct: 245 IQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSD--CPPNAVTYGTMILGLSKI 302
Query: 413 EEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
EV LE M + G Y+ ++ +V D+ + ++ + +GPD Y
Sbjct: 303 YEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMY 362
Query: 470 TVMIHGL--YDKGRLEDALSYFHEMRLKGMVP 499
T +I G K R+++AL F M+ + + P
Sbjct: 363 TTLISGYCRARKPRVDEALLLFQNMKDRRVWP 394
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 143/316 (45%), Gaps = 8/316 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMP-DLVNEK--TYGILLNRYAAAHMVEEAIGV 210
P +N +++ L + + + +F +P DLV+ TY L++ A +E AI V
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKV 205
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCV 269
+D E D A+ + C+ + V E E + + T N I+NG C
Sbjct: 206 YDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQ 265
Query: 270 LGN-VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
N + EA R ++ ++ S C P++VTY T + L+K ++ L LF+ M + G PD
Sbjct: 266 YKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGY 325
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+ +I A +++ EA +L++ P+V Y +LI C+ ++ L
Sbjct: 326 AYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQ 385
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
K+ PN IT+N +L+ L K +E + + M + C + T+ V+ ++
Sbjct: 386 NMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCR 445
Query: 446 CEDKVRHTWEEMEKKG 461
DK + +M KG
Sbjct: 446 KTDKFERIFMDMVYKG 461
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 106/250 (42%), Gaps = 12/250 (4%)
Query: 85 YPGDEIAINV--QNILKTCSVSTKGEIEKALNQ--CELTL-TDDLIVNVINRYRFDWEAA 139
Y GD A N K V E+ K + Q C+ ++ T + I+N + +Y+ E A
Sbjct: 214 YDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEA 273
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGR---ARRFVELIQVFDEMPDLVNEKTYGILLN 196
Y F+ + D P + + ++ L + +R +EL + + + Y L+
Sbjct: 274 YRLFQQMV-GSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIY 332
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF--FESEKNEFG 254
+ ++EA + D+ + L+ CR + V E F++ K+
Sbjct: 333 AFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRV 392
Query: 255 Y-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
+ ++ T NI+L G C G EA + ++++ K KC P+ +T+ + K R
Sbjct: 393 WPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCRKTDKFER 452
Query: 314 LFQAMWEKGR 323
+F M KGR
Sbjct: 453 IFMDMVYKGR 462
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 174/370 (47%), Gaps = 21/370 (5%)
Query: 149 EGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLV-NEKTYGILLNRYAAAHMV 204
E P + I+D + G ++L++ +E+ ++ N Y +++
Sbjct: 212 EDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRH 271
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
+A +F +E G DL + ++++ C AE E + + D+ T N +
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N + G +EA+ + +++ P+++TY++ ++ K+ +L A +F M KG
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P+++T N +ID C KRI + +E+L EM G + + TTYN+LI + + +
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL------KKPEEVPWVLERMER--------NGCKM 429
L EM +G C P+ +T + LL L K E+ V+++ ++ NG +
Sbjct: 452 LLQEM-ISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TYN+++ +N + +EEM +G+ PD +Y+ MI GL + RL++A F
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 490 HEMRLKGMVP 499
M K P
Sbjct: 570 DSMGSKSFSP 579
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 169/361 (46%), Gaps = 20/361 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP +NA+++ + +F E +++DEM + N TY +++ + + ++ A
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+F G +L F L+ C K ++ E E + D T N +++G+
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK------- 321
++G++ A +++I S PD VT T ++ L GKL AL +F+ M +
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 322 ----GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
G +PDV T N +I L + + EA E+ EM +RG +P+ TY+S+I LCK R
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTY 434
++ + D M K+ S PN +TF L+ K V LE M R G + TY
Sbjct: 562 LDEATQMFDSMGSKSFS--PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITY 619
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++ + + ++EM G+ PD + M+ GL+ K L+ A++ ++++
Sbjct: 620 ITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679
Query: 495 K 495
Sbjct: 680 S 680
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 144/326 (44%), Gaps = 10/326 (3%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V T+ LL+ V EA+ +F + E ++ F L+ LCR + A
Sbjct: 147 PDVV---TFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203
Query: 243 ETFFESEKNEFGYDIK-TMNIILNGWCVLGNVYEAKRFWKDIIK-SKCEPDSVTYATFVN 300
+ + + T I++G C +G+ A + + + S P+ V Y+ ++
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIID 263
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
+L K G+ A LF M EKG PD+ T N +I C R +A ++L+EM R P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPW 417
+V TYN+LI K + E DEM + +PN IT++ ++ K +
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRG--IIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ M GC + T+N ++ Y D EM + G+ D +Y +IHG Y
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRT 503
G L AL EM G+ P+ T
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVT 467
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 144/304 (47%), Gaps = 5/304 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+E+AI +F L + F L+ + R + ++ + ++ E+ + DI + I
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ +C + A + I K PD VT+ T ++ L + ++ AL LF M+E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+P+VVT +++ LC + RI EA+ +L M G P TY +++ +CKI +
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
+ L +ME+ + +PN + ++ ++ SL K + + M+ G TYN ++
Sbjct: 240 DLLRKMEEIS-HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + +EM ++ + PD +Y +I+ +G+ +A + EM +G++P
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 500 EPRT 503
T
Sbjct: 359 NTIT 362
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 148/313 (47%), Gaps = 22/313 (7%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
+AA F ++ +G SP FN ++D A+R + +++ EM + + + TY
Sbjct: 376 LDAAEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE----S 248
L++ + + A+ + G D+ LL LC ++ A F+ S
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 249 EK--------NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+K N D++T NI+++G G EA+ ++++ PD++TY++ ++
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K+ +L A ++F +M K P+VVT +I+ C R+ + LE+ EM RG +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL-PNEITFNYLLKSLKKPEEVPWVL 419
N TY +LI C +++ + LD ++ S + P+ IT +L L EE+ +
Sbjct: 615 NAITYITLI---CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 671
Query: 420 ERMERNGCKMSTD 432
+E+ +MS D
Sbjct: 672 AMLEK--LQMSMD 682
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 117/257 (45%), Gaps = 7/257 (2%)
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E E G+ +++ + +G+ + + +A + D+++S+ P V + + + + +
Sbjct: 36 GESCEAGFGGESLKL-QSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMER 94
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ L+Q M K + D+ + +I C ++P AL ++ G P+V T+N+
Sbjct: 95 PDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNT 154
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMER 424
L+ LC R+ +M + +C PN +TF L+ L + E +L+RM
Sbjct: 155 LLHGLCVEDRVSEALNLFHQMFET--TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLE 483
+G + + TY I+ +ME+ + P+ Y+ +I L GR
Sbjct: 213 DGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 484 DALSYFHEMRLKGMVPE 500
DA + F EM+ KG+ P+
Sbjct: 273 DAQNLFTEMQEKGIFPD 289
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 182/399 (45%), Gaps = 27/399 (6%)
Query: 114 NQCELTLTD-DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF 172
+Q +TD L + V++ R A FF+WV + D+ VF AILD+L
Sbjct: 76 DQFGAVITDPHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLM 135
Query: 173 VELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
V M +V+ + +G++ + A H+ + VFD+ G L D+ +L
Sbjct: 136 HAAYWV---MERVVSFEMHGVV-DVLIAGHV--XCLLVFDKMIRNGLLPDVKNCNRIL-- 187
Query: 233 LCRYKHVEVAETFFESEKNEFG----YDIK----TMNIILNGWCVLGNVYEAKRFWKDII 284
V E KN +G + IK T N +L+ +C G V +A ++
Sbjct: 188 -----RVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQ 242
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+ C P+ VTY VN L+KKG+L A L + M G T N +I+ C K
Sbjct: 243 ERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFV 302
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA +++ EM NR P ++TYN+L+ LCK ++ V +M + + P+ ++FN
Sbjct: 303 EAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFT--PDIVSFNS 360
Query: 405 LLKSLKKPEEVPWVLERMERNGCK---MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
LL + + + C+ + TYN ++ W D +EM +G
Sbjct: 361 LLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQG 420
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ PD +YT++++G + G + A +F+EM KG+ P+
Sbjct: 421 LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPD 459
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 200/463 (43%), Gaps = 40/463 (8%)
Query: 62 GRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLT 121
GR++ A L E E YP D N+L +S KGE+E+A E L
Sbjct: 229 GRVDQA-----LELLSEMQERGCYPNDV----TYNVLVN-GLSKKGELEQAKGLIEEMLN 278
Query: 122 DDL---------IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAIL-------DV 165
L ++N + EA + V+R P + +N ++ V
Sbjct: 279 SGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRA--FPTLSTYNTLMYGLCKWVQV 336
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
G RF ++++ PD+V ++ LL Y + EA +FD K + +
Sbjct: 337 TGVRLRFSDMLKS-KFTPDIV---SFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVIT 392
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDI 283
+ L+ LC + +++ A + E + G DI T I++NG LG V A+ F+ ++
Sbjct: 393 YNTLIHGLCMWGYLDAALRL-KKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEM 451
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+ +PD Y T + K A + + M G PDV+T N + ALC +
Sbjct: 452 LSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNF 511
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
EA ++L M + G +P+ TY S+I K + E +EM K + P+ +T+
Sbjct: 512 EEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVA--PSVVTYT 569
Query: 404 YLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
L+ + + + +M + TYN I+ D+ ++EME+K
Sbjct: 570 VLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEK 629
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G+ P++ SYT++I+ + G E+AL + EM + + P+ T
Sbjct: 630 GILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFT 672
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 105/272 (38%), Gaps = 41/272 (15%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+ TY IL+N V A G F+ G D A+ ++ + VA
Sbjct: 423 PDIF---TYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVA 479
Query: 243 ETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ E F D+ T N+ ++ C GN EA ++++ PD VTY + +N
Sbjct: 480 FSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIING 539
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTC------------------------------- 330
K G L A +F M KG P VVT
Sbjct: 540 FVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPAN 599
Query: 331 ----NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
N II+ LC +R+ EA + EM+ +G LPN +Y LI C + E
Sbjct: 600 VITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYR 659
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV 418
EM + P+ T + LK+L + +V V
Sbjct: 660 EMLDRKIQ--PDSFTHSVFLKNLHRDYQVHAV 689
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
V ++M RNG N IL++ + + K ++ + ME+ G+ P +Y M+
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVIK 526
+GR++ AL EM+ +G P T +LVN ++ K EQ K +I+
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLS--KKGELEQAKGLIE 274
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 175/383 (45%), Gaps = 14/383 (3%)
Query: 127 NVINRY--RFDWEAAY-TFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP 183
VIN + D + AY T+ + + R SP +++I+ L + + + ++V M
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRR--ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMV 258
Query: 184 D---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
+ N TY +L+ Y ++ +EAIG + + G D+ + +L+ +LC+
Sbjct: 259 KNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRST 318
Query: 241 VAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
A F+S K DI T +L G+ G + E ++++ PD + +
Sbjct: 319 EARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI 378
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
A K+ K+ A+ +F M + G P+VVT +I LC + +A+ +M + G
Sbjct: 379 CAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLT 438
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---P 416
PN+ Y SLI LC + + E + EM + G CL N I FN ++ S K V
Sbjct: 439 PNIIVYTSLIHSLCIFDKWDKAEELILEMLDR-GICL-NTIFFNSIIHSHCKEGRVIESE 496
Query: 417 WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
+ + M R G K + TY+ ++ Y D+ M GM PD +Y +I+G
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556
Query: 477 YDKGRLEDALSYFHEMRLKGMVP 499
R++DAL+ F EM G+ P
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSP 579
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 192/392 (48%), Gaps = 23/392 (5%)
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGI 193
+ + R G + P +VFN ++ + + E + VF +M P++V TYG
Sbjct: 356 HALLDLMVRNGIH-PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV---TYGA 411
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
++ + V++A+ F++ + G ++ + +L+ LC + + AE E +
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELI-LEMLDR 470
Query: 254 GYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G + T+ N I++ C G V E+++ + +++ +P+ +TY+T ++ GK+ A
Sbjct: 471 GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEA 530
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+L +M+ G KPD VT N +I+ C R+ +AL + +EM + G PN+ TYN +++
Sbjct: 531 TKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 590
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC---- 427
L +R E + K+G+ L T+N +L L K L RM +N C
Sbjct: 591 LFHTRRTAAAKELYVGI-TKSGTQLELS-TYNIILHGLCKNNLTDEAL-RMFQNLCLTDL 647
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
++ T T+N+++ + D+ + + + G+ PD R+Y++M L ++G LE+
Sbjct: 648 QLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDD 707
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
F M G R ++N + KL +RG+
Sbjct: 708 LFLSMEENGCTANSR---MLNSIVRKLLQRGD 736
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 174/381 (45%), Gaps = 17/381 (4%)
Query: 133 RFDWEAAYTFFKWVSREG--DYSPGSNVFNAILDVLGRARR----FVELIQVFDEMPDLV 186
R AA + + ++R G +P + + ++ RA R F L V + V
Sbjct: 62 RHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKK-GFRV 120
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLC----RYKHVEV 241
T+ LL A +A+ + RR E + D+ + LL LC + +E+
Sbjct: 121 EAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALEL 180
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ D+ + ++NG+ G+ +A + +++ + PD VTY++ + A
Sbjct: 181 LHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAA 240
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K + A+ + M + G P+ +T N I+ C ++ EA+ L++M++ G P+
Sbjct: 241 LCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPD 300
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWV 418
V TYNSL+ +LCK R + D M ++ P+ T+ LL+ E+ +
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE--PDIATYCTLLQGYATKGALVEMHAL 358
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L+ M RNG +N+++ Y + D+ + +M + G+ P+ +Y +I L
Sbjct: 359 LDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCK 418
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
G ++DA+ YF +M +G+ P
Sbjct: 419 SGSVDDAMLYFEQMIDEGLTP 439
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 138/324 (42%), Gaps = 18/324 (5%)
Query: 191 YGILLNRY---AAAHMVEEAIGVFDRRKEFGE---LDDLSAFQNLLLWLCRYKHVEVA-E 243
YG LNR A H A+ ++R G + + L+ CR +++
Sbjct: 51 YG--LNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFA 108
Query: 244 TFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF-WKDIIKSKCEPDSVTYATFVNAL 302
K F + T +L G C +A + + + C PD + + L
Sbjct: 109 ALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGL 168
Query: 303 TKKGKLGTALRLFQAMWEK---GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ + AL L M + G PDVV+ +I+ + +A EM +R
Sbjct: 169 CDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRIS 228
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVP 416
P+V TY+S+I LCK + M+ E L M KNG +PN +T+N +L S ++P+E
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKAMEVLTTM-VKNG-VMPNCMTYNSILHGYCSSEQPKEAI 286
Query: 417 WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
L++M +G + TYN ++ + R ++ M K+G+ PD +Y ++ G
Sbjct: 287 GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY 346
Query: 477 YDKGRLEDALSYFHEMRLKGMVPE 500
KG L + + M G+ P+
Sbjct: 347 ATKGALVEMHALLDLMVRNGIHPD 370
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 9/254 (3%)
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL-F 315
+ T I++ C G + +++K +++T+ + L + A+ +
Sbjct: 87 VHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVL 146
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM---KNRGCLPNVTTYNSLIKHL 372
+ M E PDV +C ++ LC + R EALE+L M + G P+V +Y ++I
Sbjct: 147 RRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGF 206
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKM 429
K + Y EM + S P+ +T++ ++ +L K + + VL M +NG
Sbjct: 207 FKEGDSDKAYSTYHEMLDRRIS--PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ TYN IL Y + + + ++M G+ PD +Y ++ L GR +A F
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324
Query: 490 HEMRLKGMVPEPRT 503
M +G+ P+ T
Sbjct: 325 DSMTKRGLEPDIAT 338
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 11/226 (4%)
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
K P TY + + G+L + +KG + + +T ++ LC KR +
Sbjct: 81 GKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSD 140
Query: 346 ALE-VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM-EQKNGSCLPNEITFN 403
A++ VLR M C+P+V + L+K LC R + E L M + + G P+ +++
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYT 200
Query: 404 YLLKSLKKPEEVPWVL----ERMERNGCKMSTD--TYNVILKLYVNWDCEDKVRHTWEEM 457
++ K + E ++R ++S D TY+ I+ DK M
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDR---RISPDVVTYSSIIAALCKGQAMDKAMEVLTTM 257
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K G+ P+ +Y ++HG + ++A+ + +MR G+ P+ T
Sbjct: 258 VKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVT 303
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 11/260 (4%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILL 195
F + R G P ++ ++D A + E ++ M PD V TY L+
Sbjct: 498 LFDLMVRIG-VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCV---TYNTLI 553
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFG 254
N Y +++A+ +F G ++ + +L L + A E + K+
Sbjct: 554 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQ 613
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T NIIL+G C EA R ++++ + + ++ T+ + AL K G+ A L
Sbjct: 614 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 673
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F A+ G PDV T + + + L + + E ++ M+ GC N NS+++ L +
Sbjct: 674 FAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQ 733
Query: 375 IKRMETVYEYLDEMEQKNGS 394
+ YL +++K+ S
Sbjct: 734 RGDITRAGTYLSMIDEKHFS 753
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 170/357 (47%), Gaps = 18/357 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +N ++ L + + + V D+M PD+V TY ILL +A
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVV---TYNILLEATCKGRGYRQA 61
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN--IILN 265
+ + D + G + + L+ +C V+ A + + G T+N +L
Sbjct: 62 MELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSH-GCKPSTVNYNTVLK 120
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C +A ++++ C P+ T+ + +L +KG L A++L + M + G
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
++VT N II+ LC ++ + A+ +L +MK+ GC P++ TYN+L+K LC R E +
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYV 442
D M Q NG CLP+ +TFN L+ L + + V ++M GC ++ TY+ I+
Sbjct: 241 DNMTQ-NG-CLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 298
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ + EM KG PD + Y ++ L D +E+A+ +++ G+ P
Sbjct: 299 KATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISP 354
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 115/257 (44%), Gaps = 48/257 (18%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
+P++ TY ++ L ++G++ AL + M +G PDVVT N +++A C + +A+E
Sbjct: 4 QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63
Query: 349 VLREMKNRGCLPNVTTYNSL-----------------------------------IKHLC 373
++ M+ GC PN TYN L +K LC
Sbjct: 64 LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMS 430
+R E + EM ++N C PNE TFN ++ SL + ++ +LE+M ++GC +
Sbjct: 124 SAERWGDADELVTEMLREN--CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN 181
Query: 431 TDTYNVILKLYVNWDCE----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
TYN I +N CE D +M+ G PD +Y ++ GL R DA
Sbjct: 182 IVTYNAI----INGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAE 237
Query: 487 SYFHEMRLKGMVPEPRT 503
M G +P+ T
Sbjct: 238 ELMDNMTQNGCLPDNVT 254
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 124/312 (39%), Gaps = 48/312 (15%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
W A + RE + P FN ++ L R + IQ+ ++M N TY
Sbjct: 128 WGDADELVTEMLRE-NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYN 186
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKN 251
++N V+ A+G+ + K +G D+ + LL LC V+ E +N
Sbjct: 187 AIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQN 246
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
D T N ++ C G + +A +K + C P+S+TY+T ++ L K KL A
Sbjct: 247 GCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQA 306
Query: 312 LRLFQAMWEKGRKPD----------------------------------VVTCNCIIDAL 337
L LF M KG PD V N I+ L
Sbjct: 307 LELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGL 366
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE-YLDEMEQKNGSCL 396
C + A++++ M + GC+P+ TY LI+ L YE YL+E +
Sbjct: 367 CRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL--------AYEGYLNEARELLIKLC 418
Query: 397 PNEITFNYLLKS 408
++ N L+KS
Sbjct: 419 SRDVLVNSLIKS 430
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 167/370 (45%), Gaps = 10/370 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+ AY F ++ +G P + ++D L +A+ VF +M D N TY
Sbjct: 221 DKAYNLFLDMTDQG-IPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTC 279
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNE 252
L++ Y + +E + + G D + LL +LC+ A F+S +
Sbjct: 280 LIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKG 339
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D+ IIL+G+ G + E F ++ + P+ + A KK +G A+
Sbjct: 340 IKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAM 399
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+F M ++G P+VV +IDALC R+ +A +M N G PN+ + SL+ L
Sbjct: 400 DIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGL 459
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
C I + E E EM N PN + FN ++ +L + + +++ MER G +
Sbjct: 460 CTIDKWEKAGELFFEM--VNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRP 517
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+YN +++ + D+ + M G+ P++ +Y ++HG GR++DA S F
Sbjct: 518 DIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVF 577
Query: 490 HEMRLKGMVP 499
EM G+ P
Sbjct: 578 QEMLSNGITP 587
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 153/372 (41%), Gaps = 47/372 (12%)
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGI 193
++F + G SP +FN + + E + +F++M P++VN Y
Sbjct: 364 HSFLDLMVGNG-ISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVN---YAT 419
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNE 252
L++ V++A F++ G ++ F +L+ LC E A E FFE
Sbjct: 420 LIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQG 479
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
++ N I+ C G V +A+R + + PD ++Y + GK A
Sbjct: 480 IHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEAS 539
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+L M G KP+ T N ++ C RI +A V +EM + G P V TYN+++ L
Sbjct: 540 KLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGL 599
Query: 373 CKIKRMETVYE-YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMST 431
K +R E YL+ M +G + S
Sbjct: 600 FKTRRFSEAKELYLN-----------------------------------MITSGKQWSI 624
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TYN+IL +C D+ ++ + K + D ++ +MI L GR EDA++ F
Sbjct: 625 YTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFAT 684
Query: 492 MRLKGMVPEPRT 503
+ G+VP+ T
Sbjct: 685 ISANGLVPDVTT 696
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 139/314 (44%), Gaps = 10/314 (3%)
Query: 194 LLNRYAAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCRYKHVEVA----ETFFES 248
LL A V EA+GV RR E G ++ ++ LL C E A +
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ ++ + N ++NG+ G V +A + D+ P+ VTY ++ L K +
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A +FQ M +KG +P++VT C+I + E + +L+EM G P+ TY L
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERN 425
+ +LCK + + D M +K P+ + +L E+ L+ M N
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIK--PDVSIYGIILHGYATKGALSEMHSFLDLMVGN 373
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G + +N++ + + + +M ++G+ P+ +Y +I L GR++DA
Sbjct: 374 GISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDA 433
Query: 486 LSYFHEMRLKGMVP 499
F++M +G+ P
Sbjct: 434 ELKFNQMINEGVAP 447
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 7/230 (3%)
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG-RKPDVVTCNCIIDALCFKKRIP 344
SK PD TY+ V + G+L F + + G R DVV N ++ LC KR+
Sbjct: 88 SKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVG 147
Query: 345 EALEVL-REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM-EQKNGSCLPNEITF 402
EA+ VL R M GC PNV +YN+L+K C R E E L M + + SC PN +++
Sbjct: 148 EAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSY 207
Query: 403 NYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
N ++ +V + M G + TY +++ D+ +++M
Sbjct: 208 NTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMID 267
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
KG+ P+ +YT +IHG G+ ++ + EM G+ P+ T G+L++
Sbjct: 268 KGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLD 317
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 122/254 (48%), Gaps = 12/254 (4%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKLGTALR- 313
D+ T +I++ +C +G + + I+K+ D V + L ++G A+
Sbjct: 93 DVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGV 152
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN---RGCLPNVTTYNSLIK 370
L + M E G P+VV+ N ++ C + R EALE+L M + R C PN+ +YN++I
Sbjct: 153 LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN 212
Query: 371 HLCKIKRMETVYE-YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNG 426
+++ Y +LD +Q PN +T+ ++ L K + V V ++M G
Sbjct: 213 GFFTEGQVDKAYNLFLDMTDQ---GIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ + TY ++ Y++ +V +EM G+ PD +Y +++ L KG+ +A
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329
Query: 487 SYFHEMRLKGMVPE 500
F M KG+ P+
Sbjct: 330 KLFDSMIRKGIKPD 343
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 128/318 (40%), Gaps = 43/318 (13%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GR---ARRFVELIQVFDEMPDLV--- 186
WE A F + +G + P FN I+ L GR A+R ++L++ PD++
Sbjct: 465 WEKAGELFFEMVNQGIH-PNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYN 523
Query: 187 -----------------------------NEKTYGILLNRYAAAHMVEEAIGVFDRRKEF 217
NE TY LL+ Y +++A VF
Sbjct: 524 ALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSN 583
Query: 218 GELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEA 276
G + + +L L + + E E + + + I T NIILNG V EA
Sbjct: 584 GITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEA 643
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
+ ++ + + D +T+ + AL K G+ A+ LF + G PDV T I +
Sbjct: 644 LKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAEN 703
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
L + + E + EM+ GC PN N L++ L + YL ++++KN S
Sbjct: 704 LIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSL- 762
Query: 397 PNEITFNYLLKSLKKPEE 414
E + +L SL EE
Sbjct: 763 --EASTTSMLISLFSREE 778
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 167/365 (45%), Gaps = 19/365 (5%)
Query: 145 WVSREGD-YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAA 200
W E D Y P F ++DVL +AR F E FD M L N TY L+
Sbjct: 355 WSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLR 414
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKT 259
A +E+A+ + + G + + + + + ETF + + +I
Sbjct: 415 AGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVA 474
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N L +G + EAK + + ++ PDSVTY + +K G++ A+ L M
Sbjct: 475 CNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI 534
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
G +PDV+ N +ID+L R+ EA ++ MK+ P V TYN+L+ L K R++
Sbjct: 535 RNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQ 594
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNV 436
E + M +K C PN I+FN LL K +EV L+ +M CK TYN
Sbjct: 595 KAIELFESMIEK--KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNT 652
Query: 437 ILKLYVNWDCEDKVRHT--WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS----YFH 490
++ + E+KV H + KK M PD + ++ GL G++ DA+S + +
Sbjct: 653 VIYGLIK---ENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMY 709
Query: 491 EMRLK 495
++R +
Sbjct: 710 QVRFR 714
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 181/412 (43%), Gaps = 19/412 (4%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD 184
+++++ + F EA + + VS EG P ++A++ LG+ R ++ + EM D
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVS-EG-LKPSLKTYSALMVALGKKRDSEMVMVLLKEMED 255
Query: 185 L---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
L N T+ I + A ++EA +F R + G DL + L+ LC +E
Sbjct: 256 LGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLEN 315
Query: 242 A-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A E F + + N D +L+ + G++ K FW + PD VT+ V+
Sbjct: 316 AKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVD 375
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K A F M ++G P++ T N +I L RI +AL++L M++ G P
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQP 435
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN---YLLKSLKKPEEVPW 417
TYN I + K E ++M+ K +PN + N Y L + + E
Sbjct: 436 TAYTYNIFIDYFGKSGETGKAVETFEKMKAK--GIVPNIVACNASLYSLAEMGRLREAKT 493
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ + NG + TYN+++K Y D+ + EM + G PD +I LY
Sbjct: 494 MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLY 553
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK--KVIKL 527
GR+++A F M+ + P T N L G++G+ K I+L
Sbjct: 554 KAGRVDEAWQMFDRMKDMKLSPTVVT------YNTLLSGLGKEGRVQKAIEL 599
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 156/343 (45%), Gaps = 49/343 (14%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A+ FK + G +P + FN +L V G++ + EL +++ EM PD + T
Sbjct: 805 EKAWDLFKDMKNVG-CAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAI---T 860
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y I+++ A ++ +++A+ + F++
Sbjct: 861 YNIVISSLAKSNNLDKAL----------------------------------DFFYDLVS 886
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
++F +T +++G +G + EA R ++++ C+P+ + +N K G T
Sbjct: 887 SDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTET 946
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A +LF+ M +G +PD+ + ++D LC R+ EAL E+K+ G P+ YN +I
Sbjct: 947 ACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIIN 1006
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGC 427
L K +RME +EM +N +P+ T+N L+ +L E+ + E ++ G
Sbjct: 1007 GLGKSQRMEEALALYNEM--RNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGL 1064
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+ TYN +++ Y + + ++ M G P+ +Y
Sbjct: 1065 EPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYA 1107
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 22/308 (7%)
Query: 229 LLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW-CVLGNVYE------AKRFWK 281
L+ LC++K A F+ + G ++ L + C++G + E A +K
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLG-----ISPTLASYNCLIGELLEVHYTEKAWDLFK 812
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
D+ C PD+ T+ + K GK+ L++ M + KPD +T N +I +L
Sbjct: 813 DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN 872
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ +AL+ ++ + P TY LI L K+ R+E +EM + C PN
Sbjct: 873 NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS--DYGCKPNCAI 930
Query: 402 FNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
FN L+ K E + +RM G + +Y +++ D+ + + E++
Sbjct: 931 FNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELK 990
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG 518
G+ PD +Y +I+GL R+E+AL+ ++EMR +G+VP+ T N + + L G
Sbjct: 991 STGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYT---YNSLMLNLGLAG 1047
Query: 519 --EQGKKV 524
EQ K++
Sbjct: 1048 MVEQAKRM 1055
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 13/287 (4%)
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
N + Y+ +I +G+C EA ++ ++ +P TY+ + AL KK
Sbjct: 191 NAYSYNGLIHLLIQSGFCG-----EALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEM 245
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
+ L + M + G +P+V T I L +I EA E+ R M + GC P++ TY LI
Sbjct: 246 VMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGC 427
LC ++E E +M + NG P+++ + LL ++ E +ME +G
Sbjct: 306 ALCNAGQLENAKELFVKM-KANGH-KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
T+ +++ + D+ T++ M K+G+ P+ +Y +I GL GR+EDAL
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKG 534
M G+ P T + D + GE GK V + KG
Sbjct: 424 LLGTMESVGVQPTAYTYNIFIDY---FGKSGETGKAVETFEKMKAKG 467
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 199/494 (40%), Gaps = 96/494 (19%)
Query: 96 NILKTCSVSTKGEIEKALN--------QCE--LTLTDDLIVNVINRYRFDWEAAYTFFKW 145
N++ C S G++++A+N CE + + + LI ++ R D A+ F
Sbjct: 511 NMMMKC-YSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD--EAWQMFDR 567
Query: 146 VSREGDYSPGSNVFNAILDVLG---RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAH 202
+ ++ SP +N +L LG R ++ +EL + E N ++ LL+ +
Sbjct: 568 M-KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKND 626
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI 262
VE A+ +F + D+ + ++ L + V A FF K D T+
Sbjct: 627 EVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICT 686
Query: 263 ILNGWCVLGNVYEA----------------KRFWKD---------------------IIK 285
+L G G + +A + FW+D ++
Sbjct: 687 LLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLN 746
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK-GRKPDVVTCNCIIDALCFKKRIP 344
C DS V L K + A ++F +K G P + + NC+I L
Sbjct: 747 GICREDSFLIP-LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTE 805
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A ++ ++MKN GC P+ T+N L+ K ++ ++E EM + C P+ IT+N
Sbjct: 806 KAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR--CKPDAITYNI 863
Query: 405 LLKSLKKP--------------------------------------EEVPWVLERMERNG 426
++ SL K EE + E M G
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYG 923
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
CK + +N+++ Y + ++ M +G+ PD +SYT+++ L GR+++AL
Sbjct: 924 CKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEAL 983
Query: 487 SYFHEMRLKGMVPE 500
YF+E++ G+ P+
Sbjct: 984 YYFNELKSTGLDPD 997
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 138/302 (45%), Gaps = 7/302 (2%)
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCR-YKHVEVAETFFE-SEKNEFGYDIKTMNIIL 264
A+ F EF + + N +L R + VE FE +K D+ T I
Sbjct: 105 ALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIF 164
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ G + + + K+ ++ +Y ++ L + G G AL +++ M +G K
Sbjct: 165 KALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLK 224
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P + T + ++ AL K+ + +L+EM++ G PNV T+ I+ L + +++ YE
Sbjct: 225 PSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEI 284
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
M+ + C P+ +T+ L+ +L + E + +M+ NG K Y +L +
Sbjct: 285 FRRMDDE--GCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
++ D + W +ME G PD ++T+++ L ++A + F MR +G++P
Sbjct: 343 NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNL 402
Query: 502 RT 503
T
Sbjct: 403 HT 404
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 6/231 (2%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRY 198
F+ VS D+ P + ++D L + R E +++F+EM D N + IL+N Y
Sbjct: 881 FYDLVS--SDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGY 938
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDI 257
E A +F R G DL ++ L+ LC V+ A +F E + D
Sbjct: 939 GKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDF 998
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
N I+NG + EA + ++ PD TY + + L G + A R+++
Sbjct: 999 IAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEE 1058
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
+ G +PDV T N +I + A V + M GC PN+ TY L
Sbjct: 1059 LQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D E A FK + EG P + ++D L A R E + F+E+ PD +
Sbjct: 943 DTETACQLFKRMVNEG-IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFI-- 999
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
Y ++N + +EEA+ +++ + G + DL + +L+L L VE A+ +E
Sbjct: 1000 -AYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEE 1058
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ D+ T N ++ G+ + N A +K+++ C P+ TYA N
Sbjct: 1059 LQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 160/324 (49%), Gaps = 10/324 (3%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL--DDLSAFQNLLLWLCRYKHVEVA- 242
+++ +YG L+N + A+ + R+ G+L ++ + ++ +C+ K V A
Sbjct: 161 LDQVSYGTLINGLCRVGETKAAVQLL--RRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAF 218
Query: 243 ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
+ + E D+ T + +++G+CV+G + A + +I P+ T++ ++
Sbjct: 219 DLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGF 278
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K+GK+ A + M +K K DVVT N ++D C K++ +A + M RG P+V
Sbjct: 279 CKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDV 338
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE-- 420
+Y+ +I CKIK ++ + +EM K PN +T+N L+ L K LE
Sbjct: 339 WSYSIMINGFCKIKMVDEAMKLFEEMHCK--QIFPNVVTYNSLVDGLCKSGRTSCALELV 396
Query: 421 -RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
M G + TYN IL + DK ++++KG+ PD +YTV+I+GL
Sbjct: 397 DEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKV 456
Query: 480 GRLEDALSYFHEMRLKGMVPEPRT 503
GRL+DA F ++ +KG P T
Sbjct: 457 GRLDDAQKVFEDLLVKGYSPNIYT 480
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 160/342 (46%), Gaps = 6/342 (1%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+G + V+L++ D N Y +++ +V +A ++ D+
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235
Query: 226 FQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ +L+ C ++ A F + ++ T +I+++G+C G V EAK ++
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K + D VTY + ++ ++ A LF M ++G PDV + + +I+ C K +
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA+++ EM + PNV TYNSL+ LCK R E +DEM + N IT+N
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQP--SNIITYNS 413
Query: 405 LLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
+L ++ K V +L +++ G + TY V++ D + +E++ KG
Sbjct: 414 ILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKG 473
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
P+ +YT +I+G +KG ++ L+ +M+ G +P T
Sbjct: 474 YSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAIT 515
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 168/355 (47%), Gaps = 15/355 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +++ I+D + + + + ++ EM PD+V TY L++ + ++ A
Sbjct: 196 PNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVV---TYSSLISGFCVVGKLKYA 252
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNG 266
+ +F+R ++ F L+ C+ V A+ K D+ T N +++G
Sbjct: 253 VDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDG 312
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C++ V +AK + + + PD +Y+ +N K + A++LF+ M K P+
Sbjct: 313 YCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPN 372
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT N ++D LC R ALE++ EM +RG N+ TYNS++ +CK ++ L
Sbjct: 373 VVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLT 432
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
++++K P+ T+ L+ L K ++ V E + G + TY ++ + N
Sbjct: 433 KIKEKGIQ--PDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCN 490
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D+ +M+ G P+ +Y ++IH L++K + A EM +G++
Sbjct: 491 KGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 160/320 (50%), Gaps = 15/320 (4%)
Query: 153 SPGSNVFNAILD---VLGRARRFVELIQVFDEM-PDLVNEK--TYGILLNRYAAAHMVEE 206
SP +++++ V+G+ + V+L F+ M D +N T+ IL++ + V E
Sbjct: 230 SPDVVTYSSLISGFCVVGKLKYAVDL---FNRMISDNINPNVYTFSILIDGFCKEGKVRE 286
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILN 265
A V + D+ + +L+ C K V A++ F + D+ + +I++N
Sbjct: 287 AKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMIN 346
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C + V EA + ++++ + P+ VTY + V+ L K G+ AL L M ++G+
Sbjct: 347 GFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPS 406
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+++T N I+DA+C + +A+ +L ++K +G P++ TY LI LCK+ R++ +
Sbjct: 407 NIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVF 466
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+++ K S PN T+ L+ +E +L +M+ NGC + TY +++
Sbjct: 467 EDLLVKGYS--PNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLF 524
Query: 443 NWDCEDKVRHTWEEMEKKGM 462
D DK EM +G+
Sbjct: 525 EKDENDKAEKLLREMIARGL 544
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 175/384 (45%), Gaps = 20/384 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+ AY+ F + G SP +++I+ L + + + QVF M PD +
Sbjct: 225 DKAYSLFDAMLDRGP-SPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCI---M 280
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-E 249
Y L++ Y ++ +EAIG+F + G D+ + L+ +LC+ A F+S
Sbjct: 281 YTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLV 340
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K D T +L+G+ G + E ++K + + + A K K+
Sbjct: 341 KRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVD 400
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL +F M ++G PD+V ++D LC R+ +AL +K+ G PN+ + +LI
Sbjct: 401 EALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLI 460
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNG 426
LC + + V E EM + G CL + I FN ++ +L K E + + M R G
Sbjct: 461 HGLCTCDKWDKVEELAFEMIDR-GICL-DTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIG 518
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ +T+TYN ++ Y D+ M G+ P +Y +I+G GR+ED L
Sbjct: 519 IEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGL 578
Query: 487 SYFHEMRLKGMVPEPRTGILVNDM 510
+ EM KG+ P GI+ +M
Sbjct: 579 TLLREMDGKGVNP----GIVTYEM 598
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 165/384 (42%), Gaps = 23/384 (5%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---------- 182
R A + F + R G S N+ + V+G RR L F +
Sbjct: 74 RASPAVAISLFNRMPRAGATSAAPNIATYGI-VIGCCRRLGRLDLAFATVGRVITTGLRH 132
Query: 183 -PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
P+ + + G L A ++ V R E G DL ++ LL LC K +
Sbjct: 133 EPNPLQSSSQGPLCTAGGRAMRMDI---VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQ 189
Query: 242 AETFFE---SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
A K D+ ++NG G + +A + ++ PD VTY++
Sbjct: 190 ALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSI 249
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
++AL+K + A ++F M + G PD + ++ C + EA+ + ++M G
Sbjct: 250 ISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGV 309
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EV 415
P+V TY +L+ +LCK + + D + ++ P+ T+ LL E+
Sbjct: 310 EPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHK--PDSTTYGTLLHGYATEGALVEM 367
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
+L+ M + G ++ +N+I+ Y + D+ + M ++G+ PD +Y ++
Sbjct: 368 HDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDI 427
Query: 476 LYDKGRLEDALSYFHEMRLKGMVP 499
L GR++DALS F+ ++ +G+ P
Sbjct: 428 LCTAGRVDDALSQFNSLKSEGLAP 451
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 109/236 (46%), Gaps = 10/236 (4%)
Query: 155 GSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAI 208
G ++FN I+ + + E + VF M PD+VN YG +L+ A V++A+
Sbjct: 382 GHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVN---YGTVLDILCTAGRVDDAL 438
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
F+ K G ++ F L+ LC K +V E FE D N I+
Sbjct: 439 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNL 498
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G V EAK + +++ EP++ TY T ++ GK+ A++L M G KP
Sbjct: 499 CKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSD 558
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
VT N II+ RI + L +LREM +G P + TY L++ L + R E
Sbjct: 559 VTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKE 614
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 5/220 (2%)
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG--RKPDVVTCNCIIDALCFKKRI 343
+ P+ TY + + G+L A + G +P+ + + R
Sbjct: 93 TSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRA 152
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
VLR M GC P++ +Y L+K LC K + + L M G C + + +
Sbjct: 153 MRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYT 212
Query: 404 YLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
++ L + ++ + + M G TY+ I+ DK + M K
Sbjct: 213 TVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKN 272
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
G+ PD YT ++HG G+ ++A+ F +M G+ P+
Sbjct: 273 GVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPD 312
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 171/373 (45%), Gaps = 12/373 (3%)
Query: 135 DWEAAY-TFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKT 190
D + AY T+ + + R SP +++I+ L + + + ++V M + N T
Sbjct: 211 DSDKAYSTYHEMLDRR--ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMT 268
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-E 249
Y +L+ Y ++ +EAIG + + G D+ + +L+ +LC+ A F+S
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMT 328
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K DI T +L G+ G + E ++++ PD + + A K+ K+
Sbjct: 329 KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVD 388
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+ +F M + G P+VVT +I LC + +A+ +M + G PN+ Y SLI
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNG 426
LC + + E + EM + G CL N I FN ++ S K V + + M R G
Sbjct: 449 HSLCIFDKWDKAEELILEMLDR-GICL-NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG 506
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
K + TY+ ++ Y D+ M GM PD +Y +I+G R++DAL
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDAL 566
Query: 487 SYFHEMRLKGMVP 499
+ F EM G+ P
Sbjct: 567 ALFKEMVSSGVSP 579
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 174/381 (45%), Gaps = 17/381 (4%)
Query: 133 RFDWEAAYTFFKWVSREG--DYSPGSNVFNAILDVLGRARR----FVELIQVFDEMPDLV 186
R AA + + ++R G +P + + ++ RA R F L V + V
Sbjct: 62 RHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKK-GFRV 120
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLC----RYKHVEV 241
T+ LL A +A+ + RR E + D+ + LL LC + +E+
Sbjct: 121 EAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALEL 180
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ D+ + ++NG+ G+ +A + +++ + PD VTY++ + A
Sbjct: 181 LHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAA 240
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K + A+ + M + G P+ +T N I+ C ++ EA+ L++M++ G P+
Sbjct: 241 LCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPD 300
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWV 418
V TYNSL+ +LCK R + D M ++ P+ T+ LL+ E+ +
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE--PDIATYCTLLQGYATKGALVEMHAL 358
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L+ M RNG +N+++ Y + D+ + +M + G+ P+ +Y +I L
Sbjct: 359 LDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCK 418
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
G ++DA+ YF +M +G+ P
Sbjct: 419 SGSVDDAMLYFEQMIDEGLTP 439
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 190/392 (48%), Gaps = 23/392 (5%)
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGI 193
+ + R G + P +VFN ++ + + E + VF +M P++V TYG
Sbjct: 356 HALLDLMVRNGIH-PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV---TYGA 411
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
++ + V++A+ F++ + G ++ + +L+ LC + + AE E +
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELI-LEMLDR 470
Query: 254 GYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G + T+ N I++ C G V E+++ + +++ +P+ +TY+T ++ GK+ A
Sbjct: 471 GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEA 530
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+L +M+ G KPD VT N +I+ C R+ +AL + +EM + G PN+ TYN +++
Sbjct: 531 TKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 590
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC---- 427
L +R E + K+G+ L T+N +L L K L RM +N C
Sbjct: 591 LFHTRRTAAAKELYVGI-TKSGTQLELS-TYNIILHGLCKNNLTDEAL-RMFQNLCLTDL 647
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
++ T T+N+++ + D+ + + G+ P+ +Y +M + +G LE+
Sbjct: 648 QLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 707
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
F M G + +G+L N + +L +RGE
Sbjct: 708 LFFSMEDNGCTVD--SGML-NFIVRELLQRGE 736
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 143/339 (42%), Gaps = 19/339 (5%)
Query: 177 QVFDEMPDLV-NEKTYGILLNRY---AAAHMVEEAIGVFDRRKEFGE---LDDLSAFQNL 229
VFDE+ YG LNR A H A+ ++R G + + L
Sbjct: 36 HVFDELLRRGRGASIYG--LNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGIL 93
Query: 230 LLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF-WKDIIKSK 287
+ CR +++ K F + T +L G C +A + + +
Sbjct: 94 IGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELS 153
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK---GRKPDVVTCNCIIDALCFKKRIP 344
C PD + + L + + AL L M + G PDVV+ +I+ +
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSD 213
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A EM +R P+V TY+S+I LCK + M+ E L M KNG +PN +T+N
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTM-VKNG-VMPNCMTYNS 271
Query: 405 LLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
+L S ++P+E L++M +G + TYN ++ + R ++ M K+G
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ PD +Y ++ G KG L + + M G+ P+
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPD 370
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 9/254 (3%)
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL-F 315
+ T I++ C G + +++K +++T+ + L + A+ +
Sbjct: 87 VHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVL 146
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM---KNRGCLPNVTTYNSLIKHL 372
+ M E PDV +C ++ LC + R EALE+L M + G P+V +Y ++I
Sbjct: 147 RRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGF 206
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKM 429
K + Y EM + S P+ +T++ ++ +L K + + VL M +NG
Sbjct: 207 FKEGDSDKAYSTYHEMLDRRIS--PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ TYN IL Y + + + ++M G+ PD +Y ++ L GR +A F
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324
Query: 490 HEMRLKGMVPEPRT 503
M +G+ P+ T
Sbjct: 325 DSMTKRGLEPDIAT 338
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 11/226 (4%)
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
K P TY + + G+L + +KG + + +T ++ LC KR +
Sbjct: 81 GKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSD 140
Query: 346 ALE-VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM-EQKNGSCLPNEITFN 403
A++ VLR M C+P+V + L+K LC R + E L M + + G P+ +++
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYT 200
Query: 404 YLLKSLKKPEEVPWVL----ERMERNGCKMSTD--TYNVILKLYVNWDCEDKVRHTWEEM 457
++ K + E ++R ++S D TY+ I+ DK M
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDR---RISPDVVTYSSIIAALCKGQAMDKAMEVLTTM 257
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K G+ P+ +Y ++HG + ++A+ + +MR G+ P+ T
Sbjct: 258 VKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVT 303
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 111/260 (42%), Gaps = 11/260 (4%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILL 195
F + R G P ++ ++D A + E ++ M PD V TY L+
Sbjct: 498 LFDLMVRIG-VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCV---TYNTLI 553
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFG 254
N Y +++A+ +F G ++ + +L L + A E + K+
Sbjct: 554 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQ 613
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T NIIL+G C EA R ++++ + + ++ T+ + AL K G+ A L
Sbjct: 614 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 673
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F A G P+ T + + + + + E ++ M++ GC + N +++ L +
Sbjct: 674 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQ 733
Query: 375 IKRMETVYEYLDEMEQKNGS 394
+ YL +++K+ S
Sbjct: 734 RGEITRAGTYLSMIDEKHFS 753
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 182/404 (45%), Gaps = 38/404 (9%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D + + K + ++G P +N +L L + RR + ++FDEM + N TY
Sbjct: 172 DLDKGFELMKSMVKDG-MGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTY 230
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEK 250
L++ Y +EEA+G +R KE +L + +LL LC V+ A E E E
Sbjct: 231 NTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEG 290
Query: 251 NEF---GY-------------------------DIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ F G+ D +T I+LNG C +G + +A+
Sbjct: 291 SGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAK 350
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
++++ P ++Y VNA ++G + A+ + M E+G +P+ +T N +I C
Sbjct: 351 LVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGE 410
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ A +R M +G P V TYNSLI + +E+LDEM++ PN I++
Sbjct: 411 VDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDK--AGIKPNVISY 468
Query: 403 NYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
L+ L +K + VL M G + + YN++++ + ++EM +
Sbjct: 469 GSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQ 528
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G+ +Y +I+GL GR++ A F +M KG P+ T
Sbjct: 529 SGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVIT 572
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 148/314 (47%), Gaps = 7/314 (2%)
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
+TY L+N Y D + G ++ ++ +L+ LC+ + + AE
Sbjct: 431 ETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLAD 490
Query: 249 EKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ + N+++ C L + +A RF+ ++I+S + VTY T +N L + G+
Sbjct: 491 MIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGR 550
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A LF M KG PDV+T N +I + LE+ +MK G P V T++
Sbjct: 551 VKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHP 610
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMER 424
LI + C+ + + T+ + EM Q + +P++ +N ++ S + V + ++M
Sbjct: 611 LI-YACRKEGVVTMDKMFQEMLQMD--LVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVD 667
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G TYN ++ Y+ +++H ++M+ KG+ P +Y ++I GL D
Sbjct: 668 QGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNG 727
Query: 485 ALSYFHEMRLKGMV 498
A ++ EM +G++
Sbjct: 728 AYFWYREMVERGLL 741
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 140/307 (45%), Gaps = 21/307 (6%)
Query: 214 RKEFGELDDLSA------FQNLLLWLCRYKHV--EVAETFFESEKNEFGYDIKTMNIILN 265
+ F L +L A F + LLWLC + E + + K+ F +++N +L
Sbjct: 71 KTAFSSLSELHAHVSKPFFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLR 130
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+ + + D+I S PD+V Y V A L L ++M + G P
Sbjct: 131 TLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGP 190
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
V N ++ LC +RI +A ++ EM R +PN TYN+LI CK+ +E +
Sbjct: 191 SVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFK 250
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+ M+++N C N +T+N LL L + ++ VL ME +G + + + +
Sbjct: 251 ERMKEQNVEC--NLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGF-LPGGFLSFVFDDHS 307
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
N +D + + K + D+R+Y ++++GL GR+E A ++ G+ P
Sbjct: 308 NGAGDDGL------FDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKI 361
Query: 503 T-GILVN 508
+ ILVN
Sbjct: 362 SYNILVN 368
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 162/402 (40%), Gaps = 81/402 (20%)
Query: 178 VFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
+FD ++E+TY ILLN +E+A V + E G ++ L+ C+
Sbjct: 315 LFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEG 374
Query: 238 HVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
V+ A T + E+ + T N +++ +C G V A+ + + +++ P TY
Sbjct: 375 DVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYN 434
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+ +N +KG M + G KP+V++ +I+ LC +++ +A VL +M R
Sbjct: 435 SLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGR 494
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ------------------KNG----- 393
G PN YN LI+ C + +++ + + DEM Q +NG
Sbjct: 495 GVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKA 554
Query: 394 ----------SCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKL 440
C P+ IT+N L+ K LE +M+ G K + T++ ++
Sbjct: 555 EDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLI-- 612
Query: 441 YVNWDCEDK----VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM---- 492
+ C + + ++EM + + PDQ Y MI+ + G + A+S +M
Sbjct: 613 ---YACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQG 669
Query: 493 -------------------------------RLKGMVPEPRT 503
+ KG+VP+ T
Sbjct: 670 VDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDT 711
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 12/241 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+ FF + + G +N +++ LGR R + +F +M PD++ TY
Sbjct: 519 AFRFFDEMIQSG-IDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVI---TYN 574
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKN 251
L++ YA + ++ + ++D+ K G + F L+ + CR + V + F E +
Sbjct: 575 SLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLI-YACRKEGVVTMDKMFQEMLQM 633
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ D N ++ + GNV +A + ++ + D VTY + + A + ++
Sbjct: 634 DLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEI 693
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L M KG P V T N +I LC K A REM RG L NV+ LI
Sbjct: 694 KHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISG 753
Query: 372 L 372
L
Sbjct: 754 L 754
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 174/371 (46%), Gaps = 10/371 (2%)
Query: 135 DWEAAY-TFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI 193
D + AY T+ + + R SP + +N+I+ L +A+ ++V M + N TY
Sbjct: 26 DVDKAYITYHEMLDRR--VSPDAVTYNSIIAALSKAQAMDRAMEVLTVMV-MPNCFTYNS 82
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNE 252
+++ Y ++ E+AIG+F + G D+ + +L+ +LC+ A F+S K
Sbjct: 83 IMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRG 142
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
DI T +L+G+ G + E ++++ + D + + A TK+ K+ +
Sbjct: 143 LKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVV 202
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+F M ++G P+ V +ID LC R+ +A+ +M ++G PNV Y SLI L
Sbjct: 203 LVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHAL 262
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKM 429
C + E E + E+ + + PN + FN +L SL K V + + + G
Sbjct: 263 CTYDKWEKAEELIFEILDQGIN--PNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNP 320
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TY+ ++ Y D M G+ PD +Y+ +I+G R+EDAL+ F
Sbjct: 321 DVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALF 380
Query: 490 HEMRLKGMVPE 500
EM G+ P+
Sbjct: 381 KEMESNGVNPD 391
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 126/247 (51%), Gaps = 9/247 (3%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ + N I++G G+V +A + +++ + PD+VTY + + AL+K + A+ +
Sbjct: 10 DVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVL 69
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M P+ T N I+ C + +A+ + R+M + G P+V TYNSL+ +LCK
Sbjct: 70 TVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKN 125
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTD 432
+ + D M ++ P+ T+ LL E+ +L M +NG ++
Sbjct: 126 GKCTEARKIFDSMVKRGLK--PDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHH 183
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+N+++ Y + D+V + +M ++G+ P+ +Y +I GL GRL+DA+ F +M
Sbjct: 184 VFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQM 243
Query: 493 RLKGMVP 499
KG+ P
Sbjct: 244 IDKGLTP 250
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 156/347 (44%), Gaps = 51/347 (14%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A F+ + +G P +N+++D L + + E ++FD M PD+ T
Sbjct: 94 EKAIGIFRKMCSDG-IEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDIT---T 149
Query: 191 YGILLNRYAAA----------------------HM-------------VEEAIGVFDRRK 215
YG LL+ YA+ H+ V+E + VF + +
Sbjct: 150 YGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMR 209
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVY 274
+ G + ++ ++ LC+ ++ A FE ++ ++ +++ C
Sbjct: 210 QQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWE 269
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A+ +I+ P+ V + T +++L K+G++ + +LF + G PDV+T + +I
Sbjct: 270 KAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLI 329
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
D C ++ A+++L M + G P+ TY++LI CKI RME EME +
Sbjct: 330 DGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVN 389
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
P+ IT+N +L L ++ + R+ +G ++ TYN+IL
Sbjct: 390 --PDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIIL 434
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
WE A + +G +P FN ILD L + R +E ++FD + PD++
Sbjct: 268 WEKAEELIFEILDQG-INPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVI--- 323
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ES 248
TY L++ Y A ++ A+ + G D + L+ C+ +E A F E
Sbjct: 324 TYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEM 383
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
E N DI T NIIL+G AK + I +S + + TY + K L
Sbjct: 384 ESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSL 443
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW 417
C P+V +YN++I L K ++ Y EM + S P+ +T+N ++ +L K + +
Sbjct: 7 CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVS--PDAVTYNSIIAALSKAQAMDR 64
Query: 418 ---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
VL M C TYN I+ Y + +K + +M G+ PD +Y ++
Sbjct: 65 AMEVLTVMVMPNCF----TYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMD 120
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
L G+ +A F M +G+ P+ T
Sbjct: 121 YLCKNGKCTEARKIFDSMVKRGLKPDITT 149
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 170/373 (45%), Gaps = 16/373 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+ AY+ F + G SP +++I+ L + + + QVF M PD +
Sbjct: 224 DKAYSLFDAMLDRGP-SPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCI---M 279
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-E 249
Y L++ Y ++ +EAIG+F + G D+ + L+ +LC+ A F+S
Sbjct: 280 YTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLV 339
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K D T +L+G+ G + E ++K + + + A K K+
Sbjct: 340 KRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVD 399
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL +F M ++G PD+V ++D LC R+ +AL +K+ G PN+ + +LI
Sbjct: 400 EALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLI 459
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNG 426
LC + + V E EM + G CL + I FN ++ +L K E + + M R G
Sbjct: 460 HGLCTCDKWDKVEELAFEMIDR-GICL-DTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIG 517
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ +T+TYN ++ Y D+ M G+ P +Y +I+G GR+ED L
Sbjct: 518 IEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGL 577
Query: 487 SYFHEMRLKGMVP 499
+ EM KG+ P
Sbjct: 578 TLLREMDGKGVNP 590
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 168/407 (41%), Gaps = 48/407 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP------DLVNEKTYG 192
A+ F + + GD + ++ A+ DV RA V I +F+ MP N TYG
Sbjct: 46 AHQVFDRLLKRGDRASIFDLNRALSDV-ARASPAVA-ISLFNRMPRAGATSAAPNIATYG 103
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
I++ ++ A R G F LL LC + A E
Sbjct: 104 IVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPE 163
Query: 253 FGY--DIKTMNIILNGWCVLGNVYEAKRFWKDII--KSKCEPDSVTYATFVNALTKKGKL 308
G D+ + I+L G C +A + K +C D V Y T +N L ++G+L
Sbjct: 164 LGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQL 223
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A LF AM ++G PDVVT + II AL + + +A +V M G +P+ Y SL
Sbjct: 224 DKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSL 283
Query: 369 IKHLCK----------IKRM--------ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
+ C K+M Y L + KNG F+ L+K
Sbjct: 284 VHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH 343
Query: 411 KPEEVPW------------------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
KP+ + +L+ M + G ++ +N+I+ Y + D+
Sbjct: 344 KPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALL 403
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ M ++G+ PD +Y ++ L GR++DALS F+ ++ +G+ P
Sbjct: 404 VFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAP 450
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 109/236 (46%), Gaps = 10/236 (4%)
Query: 155 GSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAI 208
G ++FN I+ + + E + VF M PD+VN YG +L+ A V++A+
Sbjct: 381 GHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVN---YGTVLDILCTAGRVDDAL 437
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
F+ K G ++ F L+ LC K +V E FE D N I+
Sbjct: 438 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNL 497
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G V EAK + +++ EP++ TY T ++ GK+ A++L M G KP
Sbjct: 498 CKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSD 557
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
VT N II+ RI + L +LREM +G P + TY L++ L + R E
Sbjct: 558 VTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKE 613
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 4/219 (1%)
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+ P+ TY + + G+L A + G + + + ++ LC ++R +
Sbjct: 93 TSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSD 152
Query: 346 ALE-VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
A++ VLR M GC P++ +Y L+K LC K + + L M G C + + +
Sbjct: 153 AMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTT 212
Query: 405 LLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
++ L + ++ + + M G TY+ I+ DK + M K G
Sbjct: 213 VINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG 272
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ PD YT ++HG G+ ++A+ F +M G+ P+
Sbjct: 273 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPD 311
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 184/386 (47%), Gaps = 15/386 (3%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
T ++++N ++ + +++ F + ++G + P + FN ++ L + +
Sbjct: 106 FTFNILINCFSQLGLN-SLSFSVFGKILKKG-FDPNAITFNTLIKGLCLKGHIHQALNFH 163
Query: 180 DEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA--FQNLLLWLC 234
D++ +++ +YG L+N + A+ + R G+L +A + ++ +C
Sbjct: 164 DKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVD--GKLVQPNAVMYNMIIDNMC 221
Query: 235 RYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ K V A + + + D T N ++ G+C++G + EA +I P
Sbjct: 222 KAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMY 281
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T++ V+A K+GK+ A + +K DVVT N ++D C K I +A ++ M
Sbjct: 282 TFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSM 341
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
+RG + NV +Y ++I LCKIK ++ +EM + +PN +T+N L+ L K
Sbjct: 342 ASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCR--KIIPNVVTYNSLIDGLGKLG 399
Query: 414 EVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
++ VL + M G + TYN IL DK ++ +G+ PD +YT
Sbjct: 400 KISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYT 459
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKG 496
V+I GL G+LEDA F ++ +KG
Sbjct: 460 VLIKGLCQSGKLEDAQKVFEDLLVKG 485
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 167/357 (46%), Gaps = 15/357 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + ++N I+D + +A+ + ++ +M PD + T L+ + ++EA
Sbjct: 208 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPD---DFTCNSLIYGFCIMGQLKEA 264
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNG 266
+G+ + + F L+ C+ V+ A+ + K + D+ T N +++G
Sbjct: 265 VGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDG 324
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C++ + +AK + + + +Y T +N L K + A+ LF+ M + P+
Sbjct: 325 YCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPN 384
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT N +ID L +I L+++ EM +RG PN+ TYNS++ LCK ++ L
Sbjct: 385 VVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLT 444
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+ K+ P+ T+ L+K L K E+ V E + G + TY V+++ +
Sbjct: 445 NL--KDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCV 502
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D +ME G P+ ++Y ++I L++K + A EM +G++ E
Sbjct: 503 KGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDE 559
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 144/284 (50%), Gaps = 7/284 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
T+ IL++ + V+EA + + + D+ + +L+ C K + A+ F+S
Sbjct: 282 TFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSM 341
Query: 250 KNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ ++++ ++NG C + V EA ++++ K P+ VTY + ++ L K GK+
Sbjct: 342 ASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKI 401
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
L+L M ++G+ P+++T N I+DALC + +A+ +L +K++G P++ TY L
Sbjct: 402 SCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVL 461
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERN 425
IK LC+ ++E + +++ K + + T+ +++ + +L +ME N
Sbjct: 462 IKGLCQSGKLEDAQKVFEDLLVKGYNL--DVYTYTVMIQGFCVKGLFDAALALLSKMEDN 519
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
GC + TY +++ D D EM +G+ D++SY
Sbjct: 520 GCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL-LDEKSY 562
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 129/257 (50%), Gaps = 5/257 (1%)
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K F + T N ++ G C+ G++++A F ++ D V+Y T +N L K G++
Sbjct: 133 KKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 192
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL+L + + K +P+ V N IID +C K + +A ++ +M + P+ T NSLI
Sbjct: 193 AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLI 252
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
C + +++ L +M +N + P TF+ L+ + K +E +L +
Sbjct: 253 YGFCIMGQLKEAVGLLHKMILENIN--PRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKD 310
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ TYN ++ Y +K + ++ M +G+ + +SYT MI+GL +++A+
Sbjct: 311 IILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAV 370
Query: 487 SYFHEMRLKGMVPEPRT 503
+ F EMR + ++P T
Sbjct: 371 NLFEEMRCRKIIPNVVT 387
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 35/219 (15%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D T+ +N ++ G + +F + +KG P+ +T N +I LC K I +AL
Sbjct: 104 DFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFH 163
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
++ +G + +Y +LI LCK+ R+ + L ++ K PN + +N ++ ++
Sbjct: 164 DKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGK--LVQPNAVMYNMIIDNMC 221
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
K K+ D +++ + +M K + PD +
Sbjct: 222 KA---------------KLVNDAFDL-----------------YSQMVAKRISPDDFTCN 249
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
+I+G G+L++A+ H+M L+ + P T ILV+
Sbjct: 250 SLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVD 288
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 142/310 (45%), Gaps = 9/310 (2%)
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA----ETFFESEK 250
+ Y + A +F + K +L LL L RY E F ++ K
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIK 201
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
++ T NI++ G+C+ +A F + K C PD+VTY T ++ L KKG+LG
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGD 261
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L M +G P+ T N ++ C + EA V+ M LP+V TYN LI
Sbjct: 262 ARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLIN 321
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGC 427
LC R+E ++ DEME N LP+ +++N L+ K E +LE M G
Sbjct: 322 GLCNEGRIEEAFKLRDEME--NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
K + T+N+++K Y D +T +ME+ G PD +Y +I+G G + +A
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFR 439
Query: 488 YFHEMRLKGM 497
EM K M
Sbjct: 440 TMDEMGRKNM 449
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 173/428 (40%), Gaps = 87/428 (20%)
Query: 154 PGSNVFNAI------LDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P N +N + + L A +EL+ + +PD+ TY +L+N +EEA
Sbjct: 276 PNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW---TYNMLINGLCNEGRIEEA 332
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+ D + L D+ ++ L+ + + A E E +E G + T NI++
Sbjct: 333 FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE-EMSEKGVKPNAVTHNIMVK 391
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+C G + +A + +S PD VTY T +N K G +G A R M K K
Sbjct: 392 WYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKM 451
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLR---------------------------------- 351
D VT N I+ LC +K++ EA ++L
Sbjct: 452 DSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLW 511
Query: 352 -EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
EMK + +P+ TYN +I LC+ + E L+E+ + LP+E T+N +L
Sbjct: 512 DEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE--SGLLPDETTYNTILHGYC 569
Query: 411 KPEEVPWVLE---RMERNGCKMSTDTYNVI-------------LKLYVNWDCEDKVRHT- 453
+ +V + +M N K T N++ LKL+ W + K T
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTV 629
Query: 454 ---------------------WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
EME+K +GPD +Y +I L D GR+ +A + +M
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 493 RLKGMVPE 500
KG +P+
Sbjct: 690 LEKGNLPD 697
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 164/372 (44%), Gaps = 21/372 (5%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E +SP +N +++ +A E + DEM ++ T +L +E
Sbjct: 411 ESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE 470
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIIL 264
EA + ++ G D ++ L++ + +V+ A + E ++ E T N I+
Sbjct: 471 EAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCII 530
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G C G +A ++++S PD TY T ++ ++G + A + M E K
Sbjct: 531 GGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK 590
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDV TCN ++ LC + + +AL++ ++G + TYN+LI LCK R++ +
Sbjct: 591 PDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNL 650
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
L EME+K P+ T+N ++ +L + E + +M G + + +L+L
Sbjct: 651 LSEMEEKELG--PDHYTYNAIITALTDSGRIREAEEFMSKMLEKG-----NLPDQVLQL- 702
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
DK + +Y+ I L +G+ +DA+ F E + KG+ +
Sbjct: 703 ------DKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDK 756
Query: 502 RTGILVNDMNIK 513
T I + D IK
Sbjct: 757 STYINLMDGLIK 768
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 12/267 (4%)
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
++ + D IK P+ T+ + + K A+ M + PD VT N I+D
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
LC K R+ +A ++L +MK+RG LPN TYN L+ CK+ ++ ++ M Q N
Sbjct: 252 TLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN--L 309
Query: 396 LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
LP+ T+N L+ L + EE + + ME +YN ++ + W +
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN--- 508
EEM +KG+ P+ ++ +M+ +G+++DA + +M G P+ T L+N
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429
Query: 509 ---DMNIKLKERGEQGKKVIKLTSLGL 532
+M + E G+K +K+ S+ L
Sbjct: 430 KAGNMGEAFRTMDEMGRKNMKMDSVTL 456
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 8/250 (3%)
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK---KGKLGTALRLFQ 316
++ + + G + A + +K + + + P+ +T T +N+L + + + F
Sbjct: 138 LDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFN 197
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
+ G P+V T N +I C + + +A+E L M C P+ TYN+++ LCK
Sbjct: 198 DAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKG 257
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT 433
R+ + L M+ K+ LPN T+N L+ K +E V+E M +N T
Sbjct: 258 RLGDARDLL--MDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWT 315
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
YN+++ N ++ +EME + PD SY +I+G + ++ +A EM
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375
Query: 494 LKGMVPEPRT 503
KG+ P T
Sbjct: 376 EKGVKPNAVT 385
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 110/220 (50%), Gaps = 14/220 (6%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P T + A + G+ A ++F+ M +P+++TCN ++++L R P + V
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLV---RYPSSHSV 189
Query: 350 L--REMKNR----GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
RE N G +PNV T+N +I C + + E+L+ M + N C P+ +T+N
Sbjct: 190 SFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYN--CSPDNVTYN 247
Query: 404 YLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
+L +L K + +L M+ G + +TYN+++ Y + + E M +
Sbjct: 248 TILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQN 307
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ PD +Y ++I+GL ++GR+E+A EM ++P+
Sbjct: 308 NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPD 347
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 171/336 (50%), Gaps = 11/336 (3%)
Query: 172 FVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
++ ++ F +PD V Y +++ + A ++ +A+ V D G L D+ + LL
Sbjct: 3 YLREMRCFGLVPDGV---IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLN 59
Query: 232 WLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
LC+ + + AE +E E G D+ T +++G+C+ G + +A + + ++ +
Sbjct: 60 GLCKERRLLDAEGLL-NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 118
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD VTY T ++ + ++G L A L+ M + P+ VT + +ID+ C K ++ +A
Sbjct: 119 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGF 178
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
L EM N+G LPN+ TYNS+IK C+ + ++L +M S P+ IT+N L+
Sbjct: 179 LDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVS--PDLITYNTLIHGY 236
Query: 410 KKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K +++ +L ME+ + TYN+++ + + +E+M KG+ PD+
Sbjct: 237 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 296
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+Y MI+G G ++A EM +G P+ +
Sbjct: 297 YTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDK 332
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 133/254 (52%), Gaps = 11/254 (4%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ T N +LNG C + +A+ ++ + PD T+ T ++ +GKL AL+LF
Sbjct: 50 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 109
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M + +PD+VT N +ID +C + + +A ++ +M +R PN TY+ LI C+
Sbjct: 110 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 169
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTD 432
++E + +LDEM K LPN +T+N ++K + V L++M N
Sbjct: 170 GQVEDAFGFLDEMINK--GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 227
Query: 433 TYNVILKLYVNWDCEDKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TYN ++ Y+ EDK+ ++ MEK+ + PD +Y ++I+G G +++A F
Sbjct: 228 TYNTLIHGYIK---EDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIF 284
Query: 490 HEMRLKGMVPEPRT 503
+M KG+ P+ T
Sbjct: 285 EKMCAKGIEPDRYT 298
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 34/214 (15%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD V Y + + G + ALR+ M G PDVVT N +++ LC ++R+ +A +
Sbjct: 14 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
L EM+ RG P++ T+ +LI C +++ + D M N P+ +T+N L+ +
Sbjct: 74 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM--LNQRLRPDIVTYNTLIDGM 131
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+ ++ DK W++M + + P+ +Y
Sbjct: 132 CRQGDL--------------------------------DKANDLWDDMHSREIFPNHVTY 159
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+++I +KG++EDA + EM KG++P T
Sbjct: 160 SILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 6/166 (3%)
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
+ LREM+ G +P+ Y +I C+ M DEM CLP+ +T+N LL
Sbjct: 1 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM--VGCGCLPDVVTYNTLL 58
Query: 407 KSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
L K + +L M G T+ ++ Y DK ++ M + +
Sbjct: 59 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 118
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
PD +Y +I G+ +G L+ A + +M + + P T IL++
Sbjct: 119 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID 164
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 167/370 (45%), Gaps = 10/370 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
+ AY F + G P + ++D L +A+ VF +M D + TY
Sbjct: 220 DKAYNLFLEMMDRG-IQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNC 278
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNE 252
L++ Y + +E + + + G D + +LL +LC A FF+S +
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKG 338
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
++ I+++G+ G + E ++++ PD + A KK + A+
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAM 398
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+F M ++G PDVV +IDALC R+ +A+ +M N G PN+ +NSL+ L
Sbjct: 399 HIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGL 458
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKM 429
C + + E E+ EM N P+ + FN +L +L +V +++ MER G +
Sbjct: 459 CTVDKWEKAKEFYFEM--LNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+Y ++ + D+ + + M G+ PD+ +Y ++HG GR++DA F
Sbjct: 517 DVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVF 576
Query: 490 HEMRLKGMVP 499
EM G+ P
Sbjct: 577 REMLRNGITP 586
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 145/322 (45%), Gaps = 10/322 (3%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCRYKHVEVA-- 242
VN LL A + EA+ + +R E G D+ ++ LL C K E A
Sbjct: 127 VNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALE 186
Query: 243 --ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+S+ ++ + ++NG+ G V +A + +++ +P+ VTY T ++
Sbjct: 187 LLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVID 246
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K + A +FQ M +KG KPD T NC+I + E + +L EM G P
Sbjct: 247 GLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKP 306
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPW 417
+ TY SL+ +LC R + D M +K PN + L+ E+
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFFFDSMIRK--GIKPNVAIYGILIHGYATKGALSEMHD 364
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+L M NG +N+I Y D+ H + +M+++G+ PD ++ +I L
Sbjct: 365 LLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALC 424
Query: 478 DKGRLEDALSYFHEMRLKGMVP 499
GR++DA+ F++M +G+ P
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAP 446
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 167/393 (42%), Gaps = 20/393 (5%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E SP ++FN I + E + +F++M PD+VN +G L++
Sbjct: 371 ENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN---FGALIDALCKLG 427
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMN 261
V++A+ F++ G ++ F +L+ LC E A E +FE D+ N
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
IL C G V +A+R + + PD ++Y T + G++ A + M
Sbjct: 488 TILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSV 547
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G KPD T N ++ C RI +A V REM G P V TY++++ L +R
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607
Query: 382 YE-YLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVI 437
E YL+ + N +N +L L K +E + + + ++ T+N++
Sbjct: 608 KELYLNMITSGKQW---NIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIM 664
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + H + + G+ PD +Y ++ L ++G LE+ F M G
Sbjct: 665 IGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGT 724
Query: 498 VPEPRTGILVNDMNIKLKERGEQGKKVIKLTSL 530
P R ++N + +L RG+ + L+ L
Sbjct: 725 TPNSR---MLNALVRRLLHRGDITRAGAYLSKL 754
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 158/365 (43%), Gaps = 25/365 (6%)
Query: 156 SNVFNAILDVLGRARRFVE---LIQVFDEM---------PDLVNEKTYGILLNRYAAAHM 203
+++ A+ V GR E ++ +F+ M PDL TY IL+ +
Sbjct: 53 NHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDLC---TYSILIGCFCRMGR 109
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMN 261
+E F + G + LL LC K + A E G D+ + N
Sbjct: 110 LEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYN 169
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSK---CEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
+L G+C EA + S+ C P+ V+YAT +N +G++ A LF M
Sbjct: 170 TLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEM 229
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
++G +P+VVT +ID LC + + A V ++M ++G P+ TYN LI I +
Sbjct: 230 MDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW 289
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN 435
+ V L+EM P+ T+ LL L + E + + M R G K + Y
Sbjct: 290 KEVVRMLEEMSAHGLK--PDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYG 347
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+++ Y ++ M + G+ PD + ++ K +++A+ F++M+ +
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ 407
Query: 496 GMVPE 500
G+ P+
Sbjct: 408 GLSPD 412
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 34/219 (15%)
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
K PD TY+ + + G+L F + + G + + + N ++ LC KR+ EA
Sbjct: 89 KVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREA 148
Query: 347 LEVL-REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG-SCLPNEITFNY 404
+++L + M GC P+V +YN+L+K C KR E E L M G SC PN +++
Sbjct: 149 MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAT 208
Query: 405 LLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
++ +V DK + + EM +G+ P
Sbjct: 209 VINGFFTEGQV--------------------------------DKAYNLFLEMMDRGIQP 236
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +YT +I GL ++ A F +M KG+ P+ T
Sbjct: 237 NVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 121/299 (40%), Gaps = 42/299 (14%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLG------RARRFVELIQVFDEMPDLV--- 186
WE A F+ + +G P FN IL L +A+R ++L++ PD++
Sbjct: 464 WEKAKEFYFEMLNQG-IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYT 522
Query: 187 -----------------------------NEKTYGILLNRYAAAHMVEEAIGVFDRRKEF 217
+E TY LL+ Y A +++A GVF
Sbjct: 523 TLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRN 582
Query: 218 GELDDLSAFQNLL--LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
G + + +L L+ R + E E + + ++I NIILNG V E
Sbjct: 583 GITPGVVTYSTILHGLFTTR-RFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDE 641
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A + ++ + + + T+ + AL K G+ A+ LF + G PDV T I +
Sbjct: 642 AFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAE 701
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
L + + E ++ M+ G PN N+L++ L + YL ++++KN S
Sbjct: 702 NLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFS 760
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 21/230 (9%)
Query: 299 VNALTKKGKLGT--ALRLFQAMWEKGRKPDVVTCNCIIDALC---FKKRIPEALEVLREM 353
+ + + G LG AL+LF + R ++ N ++ A+ ++ E++ +
Sbjct: 19 IGSRARSGSLGLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSL 78
Query: 354 KNR-------GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
NR P++ TY+ LI C++ R+E + + + N I N LL
Sbjct: 79 FNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRV--NNIVINQLL 136
Query: 407 KSL----KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK---VRHTWEEMEK 459
K L + E + +++RM GC +YN +LK + N ++ + H + +
Sbjct: 137 KGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQG 196
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
+ P+ SY +I+G + +G+++ A + F EM +G+ P T V D
Sbjct: 197 RSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVID 246
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 89/241 (36%), Gaps = 42/241 (17%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK-----TYGI 193
AY F+ + R G +PG ++ IL L RRF E +++ M + + K Y I
Sbjct: 572 AYGVFREMLRNG-ITPGVVTYSTILHGLFTTRRFSEAKELYLNM--ITSGKQWNIWIYNI 628
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
+LN + + V+EA +F LC +F
Sbjct: 629 ILNGLSKNNCVDEAFKLFQS-------------------LC---------------SKDF 654
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
+I T NI++ G +A + I PD TY L ++G L
Sbjct: 655 QLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDD 714
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
LF AM + G P+ N ++ L + I A L ++ + +T LI L
Sbjct: 715 LFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLS 774
Query: 374 K 374
+
Sbjct: 775 R 775
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 173/370 (46%), Gaps = 21/370 (5%)
Query: 149 EGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLV-NEKTYGILLNRYAAAHMV 204
E P + I+D + G + L++ +E+ ++ N Y +++
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
+A +F +E G DL + ++++ C AE E + + D+ T N +
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N + G +EA+ + +++ P+++TY++ ++ K+ +L A +F M KG
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P+++T N +ID C KRI + +E+L EM G + + TTYN+LI + + +
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL------KKPEEVPWVLERMER--------NGCKM 429
L EM +G C P+ +T + LL L K E+ V+++ ++ NG +
Sbjct: 452 LLQEM-ISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TYN+++ +N + +EEM +G+ PD +Y+ MI GL + RL++A F
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 490 HEMRLKGMVP 499
M K P
Sbjct: 570 DSMGSKSFSP 579
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 155/337 (45%), Gaps = 14/337 (4%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
++ IL+ + + + A+ F + + G D+ F LL LC V A FF
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175
Query: 250 -KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ ++ T ++NG C G + EA +++ +P +TY T V+ + KKG
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 309 GTALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+AL L + M E P+VV + IID+LC R +A + EM+ +G P++ TYNS
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMER 424
+I C R + L EM ++ S P+ +T+N L+ + K E + + M
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKIS--PDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G +T TY+ ++ + + D H + M KG P+ ++ +I G R++D
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413
Query: 485 ALSYFHEMRLKGMVPEPRT------GI-LVNDMNIKL 514
+ HEM G+V + T G LV D+N L
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 169/361 (46%), Gaps = 20/361 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP +NA+++ + +F E +++DEM + N TY +++ + + ++ A
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+F G +L F L+ C K ++ E E + D T N +++G+
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK------- 321
++G++ A +++I S PD VT T ++ L GKL AL +F+ M +
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 322 ----GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
G +PDV T N +I L + + EA E+ EM +RG +P+ TY+S+I LCK R
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTY 434
++ + D M K+ S PN +TF L+ K V LE M R G + TY
Sbjct: 562 LDEATQMFDSMGSKSFS--PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITY 619
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++ + + ++EM G+ PD + M+ GL+ K L+ A++ ++++
Sbjct: 620 ITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679
Query: 495 K 495
Sbjct: 680 S 680
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 142/304 (46%), Gaps = 5/304 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+E+AI +F L + F L+ + R + ++ + ++ E+ + DI + NI
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ +C + A + I K PD VT+ T ++ L + ++ AL F M+E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+P+VVT +++ LC + RI EA+ +L M G P TY +++ +CK +
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
L +ME+ + +PN + ++ ++ SL K + + M+ G TYN ++
Sbjct: 240 NLLRKMEEVS-HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + +EM ++ + PD +Y +I+ +G+ +A + EM +G++P
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 500 EPRT 503
T
Sbjct: 359 NTIT 362
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 148/313 (47%), Gaps = 22/313 (7%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
+AA F ++ +G SP FN ++D A+R + +++ EM + + + TY
Sbjct: 376 LDAAEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE----S 248
L++ + + A+ + G D+ LL LC ++ A F+ S
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 249 EK--------NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+K N D++T NI+++G G EA+ ++++ PD++TY++ ++
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K+ +L A ++F +M K P+VVT +I+ C R+ + LE+ EM RG +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL-PNEITFNYLLKSLKKPEEVPWVL 419
N TY +LI C +++ + LD ++ S + P+ IT +L L EE+ +
Sbjct: 615 NAITYITLI---CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 671
Query: 420 ERMERNGCKMSTD 432
+E+ +MS D
Sbjct: 672 AMLEK--LQMSMD 682
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 7/257 (2%)
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E E G+ +++ + +G+ + + +A + D+++S+ P V + + + + +
Sbjct: 36 GESCEAGFGGESLKL-QSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMER 94
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ L+Q M K + D+ + N +I C ++P AL ++ G P+V T+ +
Sbjct: 95 PDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTT 154
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMER 424
L+ LC R+ ++ +M + +C PN +TF L+ L + E +L+RM
Sbjct: 155 LLHGLCVEDRVSEALDFFHQMFET--TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLE 483
+G + + TY I+ + +ME+ + P+ Y+ +I L GR
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 484 DALSYFHEMRLKGMVPE 500
DA + F EM+ KG+ P+
Sbjct: 273 DAQNLFTEMQEKGIFPD 289
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 145/298 (48%), Gaps = 7/298 (2%)
Query: 211 FDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWC 268
F ++ E ++ DL F L+ C H+ A + K F D T+ ++ G C
Sbjct: 86 FSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLC 145
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+ G V EA F D+I D V+Y T +N L K G+ AL++ + + +P+VV
Sbjct: 146 LNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVV 205
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
N IID+LC K + A ++ EM + P+V TY +LI + R++ ++M
Sbjct: 206 MYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQM 265
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWD 445
KN P+ TFN L+ L K E+ VL M + G + TYN ++ Y
Sbjct: 266 LLKNIK--PDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVK 323
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
E+K + M ++G+ PD +SY++MI+GL +++A++ F EM K M P T
Sbjct: 324 QENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVT 381
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 181/391 (46%), Gaps = 60/391 (15%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++N I+D L + + + + EM PD+V TY L+ ++EA
Sbjct: 202 PNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVV---TYTTLIYGCLIVGRLKEA 258
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
+G+F+ Q LL K+++ D+ T NI+++G
Sbjct: 259 VGLFN--------------QMLL------KNIKP--------------DVYTFNILVDGL 284
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G + +A+ +IK + + VTY + ++ + A +F M +G PDV
Sbjct: 285 CKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDV 344
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ + +I+ LC K + EA+ + +EM ++ PN TYNSLI L K R+ ++ ++E
Sbjct: 345 QSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNE 404
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILK-LYVN 443
M + + IT++ LL +L K +V ++ +++ G + + TY +++ L N
Sbjct: 405 MHNRGQPA--DVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKN 462
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+D + ++++ KG D + Y VM++GL +G ++ALS +M G +P+ T
Sbjct: 463 GRLKD-AQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVT 521
Query: 504 ------GILVNDMNIK----LKERGEQGKKV 524
+ ND N K L+E QG V
Sbjct: 522 YETLVRALFENDKNDKAVKLLREMIVQGSAV 552
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 45/256 (17%)
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N IL+ L + + A F K + + +PD T+ +N G L A + +++
Sbjct: 68 NKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFK 127
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G PD VT +I LC ++ EAL ++ +G + +Y +LI LCK
Sbjct: 128 LGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRA 187
Query: 381 VYEYLDEMEQKNGSCL-PNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILK 439
+ L +++ G + PN + +N ++ SL
Sbjct: 188 ALQVLRKID---GLLVQPNVVMYNTIIDSL------------------------------ 214
Query: 440 LYVNWDCEDK-VRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
C+DK V H + EM K + PD +YT +I+G GRL++A+ F++M LK
Sbjct: 215 ------CKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLK 268
Query: 496 GMVPEPRT-GILVNDM 510
+ P+ T ILV+ +
Sbjct: 269 NIKPDVYTFNILVDGL 284
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 175/383 (45%), Gaps = 14/383 (3%)
Query: 128 VINRY--RFDWEAAY-TFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD 184
VIN + D + AY T+ + + R P +++I+ L +A+ + ++V M
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDR--GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK 262
Query: 185 ---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+ N +TY +++ Y ++ +EAIG + G D+ + +L+ +LC+
Sbjct: 263 NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322
Query: 242 AETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A F+S K +I T +L G+ G + E ++++ P+ ++ +
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A K+GK+ A+ +F M ++G PD VT +I LC R+ +A+ +M + P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PW 417
YNSLI LC + + E + EM + G CL + I FN ++ S K V
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICL-DTIFFNSIIDSHCKEGRVIESEK 500
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ + M R G K TY+ ++ Y D+ M GM PD +Y +I+G
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Query: 478 DKGRLEDALSYFHEMRLKGMVPE 500
R+EDAL F EM G+ P+
Sbjct: 561 KISRMEDALVLFREMESSGVSPD 583
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 148/346 (42%), Gaps = 40/346 (11%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N TYGIL+ A ++ + G D AF LL LC K A
Sbjct: 90 NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149
Query: 247 ESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNAL 302
+ G ++ + NI+L G C EA + + C PD V+Y T +N
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K+G L A + M ++G P+VVT + II ALC + + +A+EVL M G +PN
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 363 TTYNSLIKHLCK----------IKRMET--------VYEYLDEMEQKNGSCLPNEITFNY 404
TYNS++ C +K+M + Y L + KNG C F+
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 405 LLKSLKKPE------------------EVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ K KPE E+ +L+ M RNG + +++++ Y
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
D+ + +M ++G+ PD +Y +I L GR+EDA+ YF +M
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 181/382 (47%), Gaps = 30/382 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P VF+ ++ + + + + VF +M PD V TYG ++ + VE+A
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV---TYGTVIGILCKSGRVEDA 428
Query: 208 IGVF----DRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNI 262
+ F D R G + + +L+ LC + + A E E D N
Sbjct: 429 MRYFEQMIDERLSPGNI----VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
I++ C G V E+++ + +++ +PD +TY+T ++ GK+ A +L +M G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
KPD VT N +I+ C R+ +AL + REM++ G P++ TYN +++ L + +R
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 383 E-YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC----KMSTDTYNVI 437
E Y+ E +G+ L T+N +L L K L RM +N C ++ T T+N++
Sbjct: 605 ELYVGITE--SGTQLELS-TYNIILHGLCKNNLTDEAL-RMFQNLCLTDLQLETRTFNIM 660
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + D+ + + + G+ PD R+Y++M L ++G LE+ F M G
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720
Query: 498 VPEPRTGILVNDMNIKLKERGE 519
R ++N + KL +RG+
Sbjct: 721 TANSR---MLNSIVRKLLQRGD 739
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 4/218 (1%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE- 348
P+ TY + + G+L + +KG + D + ++ LC KR +A++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
VLR M GC+PNV +YN L+K LC R + E L M G C P+ +++ ++
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 409 LKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
K ++ M G + TY+ I+ DK M K G+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
R+Y ++HG G+ ++A+ + +M G+ P+ T
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 176/413 (42%), Gaps = 90/413 (21%)
Query: 168 RARRFVELIQVF-----DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
R++ +EL+Q+ D PD+V +Y ++N + +++A G + + G L +
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVV---SYTTVINGFFKEGDLDKAYGTYHEMLDRGILPN 233
Query: 223 LSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ + +++ LC+ + ++ A E KN + +T N I++G+C G EA F K
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+ EPD VTY + ++ L K G+ A ++F +M ++G KP++ T ++ K
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 342 -----------------------------------RIPEALEVLREMKNRGCLPNVTTYN 366
++ +A+ V +M+ +G P+ TY
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL------KKPEEVPWVLE 420
++I LCK R+E Y ++M + S P I +N L+ SL K +E+ +LE
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLS--PGNIVYNSLIHSLCIFDKWDKAKEL--ILE 469
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
++R C + T +N I+ + + ++ M + G+ PD +Y+ +I G G
Sbjct: 470 MLDRGIC-LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 481 RLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLK 533
++++A K + + S+G+K
Sbjct: 529 KMDEAT-----------------------------------KLLASMVSVGMK 546
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 45/278 (16%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
FN+I+D + R +E ++FD M PD++ TY L++ Y A ++EA +
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII---TYSTLIDGYCLAGKMDEATKLLA 538
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDI-------------- 257
G D + L+ C+ +E A F E E + DI
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598
Query: 258 ---------------------KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
T NIIL+G C EA R ++++ + + ++ T+
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 658
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+ AL K G+ A LF A+ G PDV T + + + L + + E ++ M+
Sbjct: 659 IMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEEN 718
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
GC N NS+++ L + + YL +++K+ S
Sbjct: 719 GCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS 756
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 131/282 (46%), Gaps = 40/282 (14%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D T ++ G V G + EA + +I PD VTY T +N L K G A+RL
Sbjct: 130 DTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLL 189
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+M +K +P+V N IID+LC +++ EA + EM +G P++ TYNSLI LC +
Sbjct: 190 GSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL 249
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK--------------------PEEV 415
+ V L+EM + +P+ ++FN ++ +L K P V
Sbjct: 250 CEWKHVATLLNEM--VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVV 307
Query: 416 PW------------------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
+ V + M GC + +YN ++ Y DK + + EM
Sbjct: 308 TYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 367
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++ + PD +Y+ +IHGL RL+DA++ FHEM +P
Sbjct: 368 CRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 409
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 180/411 (43%), Gaps = 51/411 (12%)
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------ 182
+NR F A++ + + G + P + F ++ + + E + +FD+M
Sbjct: 109 LNRVGF----AFSVLAKILKLG-HQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFR 163
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EV 241
PD+V TYG L+N AI + + ++ A+ ++ LC+ + V E
Sbjct: 164 PDVV---TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
F E DI T N +++ C L +++ SK PD V++ T V+A
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDA 280
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K+GK+ A + M ++G +P+VVT ++D C + EA++V M +GC+PN
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQK-------------NGSC------------- 395
V +YN+LI CKI+R++ EM ++ +G C
Sbjct: 341 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFH 400
Query: 396 -------LPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+PN +T+ LL L K E +L+ +E + N+ +
Sbjct: 401 EMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG 460
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ R + + KG+ PD +Y++MI+GL +G L++A F EM G
Sbjct: 461 ELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 511
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 157/372 (42%), Gaps = 50/372 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE-- 205
P +N I+D L + R+ E +F EM PD+ TY L+ +A ++ E
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIF---TYNSLI--HALCNLCEWK 253
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIIL 264
+ + + + D+ +F ++ LC+ V A + + ++ T ++
Sbjct: 254 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALM 313
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G C+L + EA + + ++ C P+ ++Y T +N K ++ A+ LF M +
Sbjct: 314 DGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELI 373
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD VT + +I LC +R+ +A+ + EM +PN+ TY L+ +LCK + +
Sbjct: 374 PDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMAL 433
Query: 385 LDEMEQKN-------------GSCLPNEI--------------------TFNYLLKSLKK 411
L +E N G C E+ T++ ++ L +
Sbjct: 434 LKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCR 493
Query: 412 P---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
+E + M+ NGC ++ YN I + ++ + + +EM +G D +
Sbjct: 494 RGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST 553
Query: 469 YTVMIHGLYDKG 480
T+ + L D G
Sbjct: 554 MTLFVKMLSDDG 565
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 113/244 (46%), Gaps = 10/244 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N +++ + +R + + +F EM PD V TY L++ +++A
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV---TYSTLIHGLCHVERLQDA 395
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNG 266
I +F ++ +L ++ LL +LC+ +++ A ++ E + DI+ NI ++G
Sbjct: 396 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 455
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G + A+ + ++ +PD TY+ +N L ++G L A +LF+ M E G +
Sbjct: 456 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 515
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
N I A+++L+EM RG + +T +K L +++ + L
Sbjct: 516 GCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 575
Query: 387 EMEQ 390
E Q
Sbjct: 576 EFVQ 579
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 102/247 (41%), Gaps = 34/247 (13%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P+ T +N+ ++G A + + + G +PD T +I + + +I EAL +
Sbjct: 94 PNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHL 153
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+M G P+V TY +LI LCK+ L M QKN C PN +N ++ SL
Sbjct: 154 FDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN--CQPNVFAYNTIIDSL 211
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
K +V T+ +N+ + EM KG+ PD +Y
Sbjct: 212 CKDRQV---------------TEAFNL-----------------FSEMVTKGISPDIFTY 239
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTS 529
+IH L + + + +EM ++P+ + V D K + E V K+
Sbjct: 240 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 299
Query: 530 LGLKGNA 536
G++ N
Sbjct: 300 RGVEPNV 306
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 397 PNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
P+ + FN LL S+ K + +L +M+ G + T ++++ + + +
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
++ K G PD ++T +I G+Y +G++ +AL F +M +G P+ T G L+N +
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGL 176
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 168/404 (41%), Gaps = 44/404 (10%)
Query: 160 NAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGE 219
N++L L R + + + F N ++ ILL +AA E + K G
Sbjct: 1 NSLLLALVRGGQLSDALGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKARGI 60
Query: 220 LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF--------GYDIKTMNIILNGWCVLG 271
+ + +L LC + ++ A ++F S E D T I++G G
Sbjct: 61 TSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAG 120
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
N +++ ++ SKCEP +TY V+ L K K+ A +F+ M KG KPD++ +
Sbjct: 121 NYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYS 180
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM--- 388
+ID L R+ EA +++ M RG P Y S++ LCK R++ + + EM
Sbjct: 181 SLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRR 240
Query: 389 ------------------------------EQKNGSCLPNEITFNYLLK---SLKKPEEV 415
E + C P+ I++ ++ S+ + EE
Sbjct: 241 RLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEA 300
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
V E M GCK TY +I+ + H M+K + P++ YT+++ G
Sbjct: 301 EKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDG 360
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
RLE+AL + + G++P T V + KLK+ E
Sbjct: 361 FVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDE 404
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 170/391 (43%), Gaps = 49/391 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + ++D L +A + VF+EM PD++ Y L++ + A V+EA
Sbjct: 139 PTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDII---AYSSLIDGLSKAGRVDEA 195
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNG 266
+ D G A+ +++ LC+ + E +T E + + T + I+ G
Sbjct: 196 RKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTG 255
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ +G V EA +++ C PD+++Y F+ AL G+ A ++F+ M EKG KPD
Sbjct: 256 YIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPD 315
Query: 327 VVTCNCIIDALC---------------------------------FKK--RIPEALEVLR 351
+ T IID C F K R+ EALE+ +
Sbjct: 316 MHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQ 375
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+ G LP+ TYN++I LCK+K+M+ E L EM+++ P+ +T++ ++ L K
Sbjct: 376 RILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGK 435
Query: 412 ---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
E +L M NG TY +++ + EEM K G+ PD +
Sbjct: 436 VGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHT 495
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
Y ++ L + ++ A EM G P
Sbjct: 496 YGTLVQILC-RSDVDAAWDLLQEMMRNGHTP 525
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 122/279 (43%), Gaps = 18/279 (6%)
Query: 107 GEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTF---------FKWVSREGDYSPGSN 157
G++E+A E D + I+ Y EA Y+ F+ + +G P +
Sbjct: 260 GKVEEAFAVMEEMADRDCAPDTIS-YTMFIEALYSIGRREEAEKVFETMVEKG-CKPDMH 317
Query: 158 VFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
+ I+D G ++++ D+ N Y ++++ + + +EEA+ ++ R
Sbjct: 318 TYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRI 377
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFF---ESEKNEFGYDIKTMNIILNGWCVLG 271
+ G L + ++ LC+ K ++ A + K E I T ++I++G +G
Sbjct: 378 LKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVG 437
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
A ++I + PD TY + + L GK+ A+ L + M + G PD T
Sbjct: 438 MEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYG 497
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
++ LC + + A ++L+EM G PN T+ ++ K
Sbjct: 498 TLVQILC-RSDVDAAWDLLQEMMRNGHTPNEFTFKAVEK 535
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 175/383 (45%), Gaps = 14/383 (3%)
Query: 128 VINRY--RFDWEAAY-TFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD 184
VIN + D + AY T+ + + R P +++I+ L +A+ + ++V M
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDR--GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK 262
Query: 185 ---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+ N +TY +++ Y ++ +EAIG + G D+ + +L+ +LC+
Sbjct: 263 NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322
Query: 242 AETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A F+S K +I T +L G+ G + E ++++ P+ ++ +
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A K+GK+ A+ +F M ++G PD VT +I LC R+ +A+ +M + P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PW 417
YNSLI LC + + E + EM + G CL + I FN ++ S K V
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICL-DTIFFNSIIDSHCKEGRVIESEK 500
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ + M R G K TY+ ++ Y D+ M GM PD +Y +I+G
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Query: 478 DKGRLEDALSYFHEMRLKGMVPE 500
R+EDAL F EM G+ P+
Sbjct: 561 KISRMEDALVLFREMESSGVSPD 583
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 148/346 (42%), Gaps = 40/346 (11%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N TYGIL+ A ++ + G D AF LL LC K A
Sbjct: 90 NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149
Query: 247 ESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNAL 302
+ G ++ + NI+L G C EA + + C PD V+Y T +N
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K+G L A + M ++G P+VVT + II ALC + + +A+EVL M G +PN
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 363 TTYNSLIKHLCK----------IKRMET--------VYEYLDEMEQKNGSCLPNEITFNY 404
TYNS++ C +K+M + Y L + KNG C F+
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 405 LLKSLKKPE------------------EVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ K KPE E+ +L+ M RNG + +++++ Y
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
D+ + +M ++G+ PD +Y +I L GR+EDA+ YF +M
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 178/382 (46%), Gaps = 30/382 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P VF+ ++ + + + + VF +M PD V TYG ++ + VE+A
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV---TYGTVIGILCKSGRVEDA 428
Query: 208 IGVF----DRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNI 262
+ F D R G + + +L+ LC + + A E E D N
Sbjct: 429 MRYFEQMIDERLSPGNI----VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
I++ C G V E+++ + +++ +PD +TY+T ++ GK+ A +L +M G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
KPD VT N +I+ C R+ +AL + REM++ G P++ TYN +++ L + +R
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 383 E-YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC----KMSTDTYNVI 437
E Y+ E L T+N +L L K L RM +N C ++ T T+N++
Sbjct: 605 ELYVGITESGTQLELS---TYNIILHGLCKNNLTDEAL-RMFQNLCLTDLQLETRTFNIM 660
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + D+ + + + G+ PD R+Y++M L ++G LE+ F M G
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720
Query: 498 VPEPRTGILVNDMNIKLKERGE 519
R ++N + KL +RG+
Sbjct: 721 TANSR---MLNSIVRKLLQRGD 739
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 4/218 (1%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE- 348
P+ TY + + G+L + +KG + D + ++ LC KR +A++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
VLR M GC+PNV +YN L+K LC R + E L M G C P+ +++ ++
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 409 LKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
K ++ M G + TY+ I+ DK M K G+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
R+Y ++HG G+ ++A+ + +M G+ P+ T
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 174/413 (42%), Gaps = 90/413 (21%)
Query: 168 RARRFVELIQVF-----DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
R++ +EL+Q+ D PD+V +Y ++N + +++A G + + G L +
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVV---SYTTVINGFFKEGDLDKAYGTYHEMLDRGILPN 233
Query: 223 LSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ + +++ LC+ + ++ A E KN + +T N I++G+C G EA F K
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+ EPD VTY + ++ L K G+ A ++F +M ++G KP++ T ++ K
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 342 -----------------------------------RIPEALEVLREMKNRGCLPNVTTYN 366
++ +A+ V +M+ +G P+ TY
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL------KKPEEVPWVLE 420
++I LCK R+E Y ++M + S P I +N L+ SL K +E+ +LE
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLS--PGNIVYNSLIHSLCIFDKWDKAKEL--ILE 469
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
++R C + T +N I+ + + ++ M + G+ PD +Y+ +I G G
Sbjct: 470 MLDRGIC-LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 481 RLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLK 533
++++A M S+G+K
Sbjct: 529 KMDEATKLLASM-----------------------------------VSVGMK 546
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
FN+I+D + R +E ++FD M PD++ TY L++ Y A ++EA +
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII---TYSTLIDGYCLAGKMDEATKLLA 538
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDI-------------- 257
G D + L+ C+ +E A F E E + DI
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598
Query: 258 ---------------------KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
T NIIL+G C EA R ++++ + + ++ T+
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 658
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+ AL K G+ A LF A+ G PDV T + + + L + + E ++ M+
Sbjct: 659 IMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEEN 718
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
GC N NS+++ L + + YL +++K+
Sbjct: 719 GCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754
>gi|255566203|ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536657|gb|EEF38299.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1072
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 194/444 (43%), Gaps = 50/444 (11%)
Query: 71 HSLANSDEKSE-----FQRYPGDEIAINVQNILKTCSVSTKGE----IEKALNQCELTLT 121
HS++N++ SE Q + N Q++ + C + + + +++AL +C L T
Sbjct: 625 HSMSNNETNSEQGLTNCQLAKPHPKSSNEQDLKEICKILSSSKDWCIMQEALEKCTLQFT 684
Query: 122 DDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE 181
L++ +++ AA FF W+ + Y +N + + GR + F + +F E
Sbjct: 685 PGLVLEILHNCSMHGNAALKFFSWLGVQTGYCHTKETYNMAMKISGREKDFKHMRSLFYE 744
Query: 182 MPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
M L+ T+ I++ +Y + E ++ F K+ G + + S ++ LL+ LC K
Sbjct: 745 MRRKGCLITPDTWAIMIMQYGRTGLTEISLKTFTEMKDNGYIPNDSTYKYLLISLCGKKG 804
Query: 239 VEVAET---FFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
+V E F E + + D + + L+ C G + EA++ + + ++Y
Sbjct: 805 RKVDEAIKIFHEMIRTRYIPDREVVGTYLSCLCEAGRLSEARKSTDSLCRIGYTI-PLSY 863
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+ ++ AL + G+L AL L + + D T ++ L K R EAL + MK
Sbjct: 864 SLYIRALCRSGRLEEALSLLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEALAKIESMKE 923
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
G P V Y SLI H K K++E + ++M+Q
Sbjct: 924 AGINPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQ------------------------- 958
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
+GC+ + TY+ +++ Y+N + D ++ KG PD ++Y++ I
Sbjct: 959 ---------DGCEPTVVTYSALIRGYMNMERADDAWSVLNHLKLKGPKPDFKTYSMFISC 1009
Query: 476 LYDKGRLEDALSYFHEMRLKGMVP 499
L G+ E+AL M G+VP
Sbjct: 1010 LCKAGKSEEALQLLSRMLEDGIVP 1033
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 159/366 (43%), Gaps = 41/366 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILL 195
A+ FF WV + + + +L + G A+ F + + +EM EK T+ IL+
Sbjct: 193 AFRFFSWVKMRDGFCHTTKTYYTMLYIAGEAKEFKVVDDLVEEMEKNSCEKDIKTWSILI 252
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+++ A ++ +A+ F++ K G D ++ ++ LC EVA F+
Sbjct: 253 SQFGKAKLIGKALLFFEKMKTSGCEPDEKIYKMMVHSLCNAGKGEVALAFY--------- 303
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
K++++ D Y + ++ K G +G +
Sbjct: 304 -------------------------KEMVQKDMRLDLSLYKILLISMAKSGDVGAVHLVA 338
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M + P+ CI+ + C +I EALE++R++KN+ L + +L+K LC+
Sbjct: 339 NDMSRLSQIPEHDVNVCILKSFCVAGKIREALELIRDLKNKDILIDYEYLGTLVKGLCRG 398
Query: 376 KRMETVYEYLDEMEQKN--GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDT 433
R+ E ++ M+++N + + I YL K K + + +RM+ +G + T T
Sbjct: 399 DRITDAVEIVEIMKKRNLIDAKIYGIIINGYLRK--KDLSKAIELFQRMKESGIQPITST 456
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y +++ N + DK + EM ++G+ D + ++ + + +A F+ M+
Sbjct: 457 YTELMQCLFNLNQYDKGFELFNEMLERGIRVDSVATMAIVAAHVRQNHISEAWEVFNTMK 516
Query: 494 LKGMVP 499
KG P
Sbjct: 517 DKGANP 522
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 145/325 (44%), Gaps = 11/325 (3%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI--- 193
E A F+K + ++ D +++ +L + ++ + V ++M L + +
Sbjct: 297 EVALAFYKEMVQK-DMRLDLSLYKILLISMAKSGDVGAVHLVANDMSRLSQIPEHDVNVC 355
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
+L + A + EA+ + K L D L+ LCR + A E K
Sbjct: 356 ILKSFCVAGKIREALELIRDLKNKDILIDYEYLGTLVKGLCRGDRITDAVEIVEIMKKRN 415
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
D K II+NG+ ++ +A ++ + +S +P + TY + L +
Sbjct: 416 LIDAKIYGIIINGYLRKKDLSKAIELFQRMKESGIQPITSTYTELMQCLFNLNQYDKGFE 475
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
LF M E+G + D V I+ A + I EA EV MK++G P +Y+ IK LC
Sbjct: 476 LFNEMLERGIRVDSVATMAIVAAHVRQNHISEAWEVFNTMKDKGANPTWKSYSIFIKELC 535
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV--LERMERNGCKMST 431
++ R + + + L +M Q + + N+I FN + ++K EV V +++M+R C++ +
Sbjct: 536 RVSRTDEILKVLYKM-QASKIFINNDI-FNLAIAFMEKKGEVDNVQKVKQMQRI-CRLHS 592
Query: 432 --DTYNVILKLYVNWDCEDKVRHTW 454
D + +L V +C + W
Sbjct: 593 LQDEGSGEQELLVEQNCNQSEQGKW 617
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 14/222 (6%)
Query: 290 PDSVTYATFVNALT-KKG-KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
P+ TY + +L KKG K+ A+++F M PD + LC R+ EA
Sbjct: 787 PNDSTYKYLLISLCGKKGRKVDEAIKIFHEMIRTRYIPDREVVGTYLSCLCEAGRLSEA- 845
Query: 348 EVLREMKNRGCLPNVT---TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
R+ + C T +Y+ I+ LC+ R+E LDE+ + + ++ T+
Sbjct: 846 ---RKSTDSLCRIGYTIPLSYSLYIRALCRSGRLEEALSLLDEVGTERSTL--DQYTYGT 900
Query: 405 LLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ L + EE +E M+ G + Y ++ + +K +E+M++ G
Sbjct: 901 LVHGLLRKGRQEEALAKIESMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQDG 960
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
P +Y+ +I G + R +DA S + ++LKG P+ +T
Sbjct: 961 CEPTVVTYSALIRGYMNMERADDAWSVLNHLKLKGPKPDFKT 1002
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 11/221 (4%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY T + + + L + M + + D+ T + +I K I +AL +M
Sbjct: 212 TYYTMLYIAGEAKEFKVVDDLVEEMEKNSCEKDIKTWSILISQFGKAKLIGKALLFFEKM 271
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
K GC P+ Y ++ LC + E + EM QK+ + + LL S+ K
Sbjct: 272 KTSGCEPDEKIYKMMVHSLCNAGKGEVALAFYKEMVQKDMRL--DLSLYKILLISMAKSG 329
Query: 414 EVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE---EMEKKGMGPDQR 467
+V V M R D ILK + K+R E +++ K + D
Sbjct: 330 DVGAVHLVANDMSRLSQIPEHDVNVCILKSFC---VAGKIREALELIRDLKNKDILIDYE 386
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVN 508
++ GL R+ DA+ M+ + ++ GI++N
Sbjct: 387 YLGTLVKGLCRGDRITDAVEIVEIMKKRNLIDAKIYGIIIN 427
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 173/370 (46%), Gaps = 21/370 (5%)
Query: 149 EGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLV-NEKTYGILLNRYAAAHMV 204
E P + I+D + G + L++ +E+ ++ N Y +++
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
+A +F +E G DL + ++++ C AE E + + D+ T N +
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N + G +EA+ + +++ P+++TY++ ++ K+ +L A +F M KG
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P+++T N +ID C KRI + +E+L EM G + + TTYN+LI + + +
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL------KKPEEVPWVLERMER--------NGCKM 429
L EM +G C P+ +T + LL L K E+ V+++ ++ NG +
Sbjct: 452 LLQEM-ISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TYN+++ +N + +EEM +G+ PD +Y+ MI GL + RL++A F
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 490 HEMRLKGMVP 499
M K P
Sbjct: 570 DSMGSKSFSP 579
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 169/361 (46%), Gaps = 20/361 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP +NA+++ + +F E +++DEM + N TY +++ + + ++ A
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+F G +L F L+ C K ++ E E + D T N +++G+
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK------- 321
++G++ A +++I S PD VT T ++ L GKL AL +F+ M +
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 322 ----GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
G +PDV T N +I L + + EA E+ EM +RG +P+ TY+S+I LCK R
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTY 434
++ + D M K+ S PN +TF L+ K V LE M R G + TY
Sbjct: 562 LDEATQMFDSMGSKSFS--PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITY 619
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++ + + ++EM G+ PD + M+ GL+ K L+ A++ ++++
Sbjct: 620 ITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679
Query: 495 K 495
Sbjct: 680 S 680
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 13/286 (4%)
Query: 222 DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D+ +F L+ C + A TF + K D+ T N +L+G CV V EA +
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+ ++ C P+ VT+ T +N L ++G++ A+ L M E G +P +T I+D +C K
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 341 KRIPEALEVLREMKNRG-CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
AL +LR+M+ +PNV Y+++I LCK R EM++K P+
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG--IFPDL 290
Query: 400 ITFNYLL----KSLKKPEEVPWVLERMERNGCKMSTD--TYNVILKLYVNWDCEDKVRHT 453
T+N ++ S + + + E +ER K+S D TYN ++ +V +
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLER---KISPDVVTYNALINAFVKEGKFFEAEEL 347
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++EM +G+ P+ +Y+ MI G + RL+ A F+ M KG P
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 143/326 (43%), Gaps = 10/326 (3%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V T+ LL+ V EA+ +F + E ++ F L+ LCR + A
Sbjct: 147 PDVV---TFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203
Query: 243 ETFFESEKNEFGYDIK-TMNIILNGWCVLGNVYEAKRFWKDIIK-SKCEPDSVTYATFVN 300
+ + + T I++G C G+ A + + + S P+ V Y+ ++
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
+L K G+ A LF M EKG PD+ T N +I C R +A ++L+EM R P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPW 417
+V TYN+LI K + E DEM + +PN IT++ ++ K +
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRG--IIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ M GC + T+N ++ Y D EM + G+ D +Y +IHG Y
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRT 503
G L AL EM G+ P+ T
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVT 467
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 142/304 (46%), Gaps = 5/304 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+E+AI +F L + F L+ + R + ++ + ++ E+ + DI + I
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ +C + A + I K PD VT+ T ++ L + ++ AL LF M+E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+P+VVT +++ LC + RI EA+ +L M G P TY +++ +CK +
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
L +ME+ + +PN + ++ ++ SL K + + M+ G TYN ++
Sbjct: 240 NLLRKMEEVS-HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + +EM ++ + PD +Y +I+ +G+ +A + EM +G++P
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 500 EPRT 503
T
Sbjct: 359 NTIT 362
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 148/313 (47%), Gaps = 22/313 (7%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
+AA F ++ +G SP FN ++D A+R + +++ EM + + + TY
Sbjct: 376 LDAAEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE----S 248
L++ + + A+ + G D+ LL LC ++ A F+ S
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 249 EK--------NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+K N D++T NI+++G G EA+ ++++ PD++TY++ ++
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K+ +L A ++F +M K P+VVT +I+ C R+ + LE+ EM RG +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL-PNEITFNYLLKSLKKPEEVPWVL 419
N TY +LI C +++ + LD ++ S + P+ IT +L L EE+ +
Sbjct: 615 NAITYITLI---CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 671
Query: 420 ERMERNGCKMSTD 432
+E+ +MS D
Sbjct: 672 AMLEK--LQMSMD 682
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 7/257 (2%)
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E E G+ +++ + +G+ + + +A + D+++S+ P V + + + + +
Sbjct: 36 GESCEAGFGGESLKL-QSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMER 94
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ L+Q M K + D+ + +I C ++P AL ++ G P+V T+N+
Sbjct: 95 PDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNT 154
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMER 424
L+ LC R+ +M + +C PN +TF L+ L + E +L+RM
Sbjct: 155 LLHGLCVEDRVSEALNLFHQMFET--TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLE 483
+G + + TY I+ + +ME+ + P+ Y+ +I L GR
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 484 DALSYFHEMRLKGMVPE 500
DA + F EM+ KG+ P+
Sbjct: 273 DAQNLFTEMQEKGIFPD 289
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 173/370 (46%), Gaps = 21/370 (5%)
Query: 149 EGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLV-NEKTYGILLNRYAAAHMV 204
E P + I+D + G + L++ +E+ ++ N Y +++
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
+A +F +E G DL + ++++ C AE E + + D+ T N +
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N + G +EA+ + +++ P+++TY++ ++ K+ +L A +F M KG
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P+++T N +ID C KRI + +E+L EM G + + TTYN+LI + + +
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL------KKPEEVPWVLERMER--------NGCKM 429
L EM +G C P+ +T + LL L K E+ V+++ ++ NG +
Sbjct: 452 LLQEM-ISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TYN+++ +N + +EEM +G+ PD +Y+ MI GL + RL++A F
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 490 HEMRLKGMVP 499
M K P
Sbjct: 570 DSMGSKSFSP 579
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 169/361 (46%), Gaps = 20/361 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP +NA+++ + +F E +++DEM + N TY +++ + + ++ A
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+F G +L F L+ C K ++ E E + D T N +++G+
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK------- 321
++G++ A +++I S PD VT T ++ L GKL AL +F+ M +
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 322 ----GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
G +PDV T N +I L + + EA E+ EM +RG +P+ TY+S+I LCK R
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTY 434
++ + D M K+ S PN +TF L+ K V LE M R G + TY
Sbjct: 562 LDEATQMFDSMGSKSFS--PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITY 619
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++ + + ++EM G+ PD + M+ GL+ K L+ A++ ++++
Sbjct: 620 ITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679
Query: 495 K 495
Sbjct: 680 S 680
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 13/286 (4%)
Query: 222 DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D+ +F L+ C + A TF + K D+ T N +L+G CV V EA +
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+ ++ C P+ VT+ T +N L ++G++ A+ L M E G +P +T I+D +C K
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 341 KRIPEALEVLREMKNRG-CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
AL +LR+M+ +PNV Y+++I LCK R EM++K P+
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG--IFPDL 290
Query: 400 ITFNYLL----KSLKKPEEVPWVLERMERNGCKMSTD--TYNVILKLYVNWDCEDKVRHT 453
T+N ++ S + + + E +ER K+S D TYN ++ +V +
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLER---KISPDVVTYNALINAFVKEGKFFEAEEL 347
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++EM +G+ P+ +Y+ MI G + RL+ A F+ M KG P
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 143/326 (43%), Gaps = 10/326 (3%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V T+ LL+ V EA+ +F + E ++ F L+ LCR + A
Sbjct: 147 PDVV---TFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203
Query: 243 ETFFESEKNEFGYDIK-TMNIILNGWCVLGNVYEAKRFWKDIIK-SKCEPDSVTYATFVN 300
+ + + T I++G C G+ A + + + S P+ V Y+ ++
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
+L K G+ A LF M EKG PD+ T N +I C R +A ++L+EM R P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPW 417
+V TYN+LI K + E DEM + +PN IT++ ++ K +
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRG--IIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ M GC + T+N ++ Y D EM + G+ D +Y +IHG Y
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRT 503
G L AL EM G+ P+ T
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVT 467
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 142/304 (46%), Gaps = 5/304 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+E+AI +F L + F L+ + R + ++ + ++ E+ + DI + I
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ +C + A + + K PD VT+ T ++ L + ++ AL LF M+E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+P+VVT +++ LC + RI EA+ +L M G P TY +++ +CK +
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
L +ME+ + +PN + ++ ++ SL K + + M+ G TYN ++
Sbjct: 240 NLLRKMEEVS-HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + +EM ++ + PD +Y +I+ +G+ +A + EM +G++P
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 500 EPRT 503
T
Sbjct: 359 NTIT 362
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 148/313 (47%), Gaps = 22/313 (7%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
+AA F ++ +G SP FN ++D A+R + +++ EM + + + TY
Sbjct: 376 LDAAEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE----S 248
L++ + + A+ + G D+ LL LC ++ A F+ S
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 249 EK--------NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+K N D++T NI+++G G EA+ ++++ PD++TY++ ++
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K+ +L A ++F +M K P+VVT +I+ C R+ + LE+ EM RG +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL-PNEITFNYLLKSLKKPEEVPWVL 419
N TY +LI C +++ + LD ++ S + P+ IT +L L EE+ +
Sbjct: 615 NAITYITLI---CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 671
Query: 420 ERMERNGCKMSTD 432
+E+ +MS D
Sbjct: 672 AMLEK--LQMSMD 682
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 7/257 (2%)
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E E G+ +++ + +G+ + + +A + D+++S+ P V + + + + +
Sbjct: 36 GESCEAGFGGESLKL-QSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMER 94
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ L+Q M K + D+ + +I C ++P AL ++ G P+V T+N+
Sbjct: 95 PDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNT 154
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMER 424
L+ LC R+ +M + +C PN +TF L+ L + E +L+RM
Sbjct: 155 LLHGLCVEDRVSEALNLFHQMFET--TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLE 483
+G + + TY I+ + +ME+ + P+ Y+ +I L GR
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 484 DALSYFHEMRLKGMVPE 500
DA + F EM+ KG+ P+
Sbjct: 273 DAQNLFTEMQEKGIFPD 289
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 173/370 (46%), Gaps = 21/370 (5%)
Query: 149 EGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLV-NEKTYGILLNRYAAAHMV 204
E P + I+D + G + L++ +E+ ++ N Y +++
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
+A +F +E G DL + ++++ C AE E + + D+ T N +
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N + G +EA+ + +++ P+++TY++ ++ K+ +L A +F M KG
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P+++T N +ID C KRI + +E+L EM G + + TTYN+LI + + +
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL------KKPEEVPWVLERMER--------NGCKM 429
L EM +G C P+ +T + LL L K E+ V+++ ++ NG +
Sbjct: 452 LLQEM-ISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TYN+++ +N + +EEM +G+ PD +Y+ MI GL + RL++A F
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 490 HEMRLKGMVP 499
M K P
Sbjct: 570 DSMGSKSFSP 579
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 169/361 (46%), Gaps = 20/361 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP +NA+++ + +F E +++DEM + N TY +++ + + ++ A
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+F G +L F L+ C K ++ E E + D T N +++G+
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK------- 321
++G++ A +++I S PD VT T ++ L GKL AL +F+ M +
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 322 ----GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
G +PDV T N +I L + + EA E+ EM +RG +P+ TY+S+I LCK R
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTY 434
++ + D M K+ S PN +TF L+ K V LE M R G + TY
Sbjct: 562 LDEATQMFDSMGSKSFS--PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITY 619
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++ + + ++EM G+ PD + M+ GL+ K L+ A++ ++++
Sbjct: 620 ITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679
Query: 495 K 495
Sbjct: 680 S 680
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 143/326 (43%), Gaps = 10/326 (3%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V T+ LL+ V EA+ +F + E ++ F L+ LCR + A
Sbjct: 147 PDVV---TFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203
Query: 243 ETFFESEKNEFGYDIK-TMNIILNGWCVLGNVYEAKRFWKDIIK-SKCEPDSVTYATFVN 300
+ + + T I++G C G+ A + + + S P+ V Y+ ++
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
+L K G+ A LF M EKG PD+ T N +I C R +A ++L+EM R P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPW 417
+V TYN+LI K + E DEM + +PN IT++ ++ K +
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRG--IIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ M GC + T+N ++ Y D EM + G+ D +Y +IHG Y
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRT 503
G L AL EM G+ P+ T
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVT 467
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 143/304 (47%), Gaps = 5/304 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+E+AI +F L + F L+ + R + ++ + ++ E+ + DI + NI
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ +C + A + I K PD VT+ T ++ L + ++ AL LF M+E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+P+VVT +++ LC + RI EA+ +L M G P TY +++ +CK +
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
L +ME+ + +PN + ++ ++ SL K + + M+ G TYN ++
Sbjct: 240 NLLRKMEEVS-HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + +EM ++ + PD +Y +I+ +G+ +A + EM +G++P
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 500 EPRT 503
T
Sbjct: 359 NTIT 362
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 148/313 (47%), Gaps = 22/313 (7%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
+AA F ++ +G SP FN ++D A+R + +++ EM + + + TY
Sbjct: 376 LDAAEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE----S 248
L++ + + A+ + G D+ LL LC ++ A F+ S
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 249 EK--------NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+K N D++T NI+++G G EA+ ++++ PD++TY++ ++
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K+ +L A ++F +M K P+VVT +I+ C R+ + LE+ EM RG +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL-PNEITFNYLLKSLKKPEEVPWVL 419
N TY +LI C +++ + LD ++ S + P+ IT +L L EE+ +
Sbjct: 615 NAITYITLI---CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 671
Query: 420 ERMERNGCKMSTD 432
+E+ +MS D
Sbjct: 672 AMLEK--LQMSMD 682
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 7/257 (2%)
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E E G+ +++ + +G+ + + +A + D+++S+ P V + + + + +
Sbjct: 36 GESCEAGFGGESLKL-QSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMER 94
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ L+Q M K + D+ + N +I C ++P AL ++ G P+V T+ +
Sbjct: 95 PDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTT 154
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMER 424
L+ LC R+ +M + +C PN +TF L+ L + E +L+RM
Sbjct: 155 LLHGLCVEDRVSEALNLFHQMFET--TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLE 483
+G + + TY I+ + +ME+ + P+ Y+ +I L GR
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 484 DALSYFHEMRLKGMVPE 500
DA + F EM+ KG+ P+
Sbjct: 273 DAQNLFTEMQEKGIFPD 289
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 167/375 (44%), Gaps = 16/375 (4%)
Query: 139 AYTFFKWVSREGDYS----PGSNVFNAILDVLGRARR---FVELIQVFDEMPDLVNEKTY 191
A F V RE + P +N ++D RARR + L +++ T
Sbjct: 136 ALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITA 195
Query: 192 GILLNRYAAAHMVEEAIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
LL A+ EEA+ V R E G + + ++ +L LC + A +
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA 255
Query: 251 NEFGY---DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ G D+ + +++G+ G +A + ++ + +PD VTY ++AL K
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A + + M G +PD VT +C+I R+ EA ++ REMK RG +PN+ T NS
Sbjct: 316 MDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNS 375
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMER 424
+ LCK R + E+ D M K P+ ++ LL ++ + M+
Sbjct: 376 FLASLCKHGRSKEAAEFFDSMTAKGHK--PDIFSYCTLLHGYASEGCFADMIGLFNSMKS 433
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
NG + + +++ Y D + EM+++G+ PD +Y+ +I GRL D
Sbjct: 434 NGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTD 493
Query: 485 ALSYFHEMRLKGMVP 499
A+ F++M +G+ P
Sbjct: 494 AMEKFNQMVARGIQP 508
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 179/384 (46%), Gaps = 18/384 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A + F ++R+G P +N I+D L +AR + V +M PD V TY
Sbjct: 284 ACSLFHEMTRQG-VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTV---TYS 339
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
+++ YA ++EA +F K+ G + ++ + L LC++ + A FF+S +
Sbjct: 340 CMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAK 399
Query: 253 FGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
G+ DI + +L+G+ G + + + + + + ++A K+G +
Sbjct: 400 -GHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDD 458
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A+ +F M ++G PDVVT + +I R+ +A+E +M RG PN Y+S+I+
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQ 518
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGC 427
C + E + EM K G P+ + F+ ++ SL K V + + G
Sbjct: 519 GFCMHGGLVKAKELVSEMINK-GIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGE 577
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ T+N ++ Y DK + ME G+ PD +Y ++ G + GR+ D L+
Sbjct: 578 RPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLT 637
Query: 488 YFHEMRLKGMVPEPRT-GILVNDM 510
F EM+ KG+ P T GI++ +
Sbjct: 638 LFREMQRKGVKPNTVTYGIMLAGL 661
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 149/319 (46%), Gaps = 11/319 (3%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFG-ELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY IL++ A + + +F G ++D ++A LL LC E A
Sbjct: 159 TYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITA-NTLLKCLCYANRTEEAVNVLLH 217
Query: 249 EKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNALTK 304
+E G + + +I+L C A + + K C PD V Y+T ++
Sbjct: 218 RMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFN 277
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
+G+ G A LF M +G KPDVVT N IIDALC + + +A VLR+M G P+ T
Sbjct: 278 EGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVT 337
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLER 421
Y+ +I + R++ + EM+++ +PN +T N L SL K +E +
Sbjct: 338 YSCMIHGYATLGRLKEAAKMFREMKKRG--LIPNIVTCNSFLASLCKHGRSKEAAEFFDS 395
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M G K +Y +L Y + C + + M+ G+ + +T++IH +G
Sbjct: 396 MTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGM 455
Query: 482 LEDALSYFHEMRLKGMVPE 500
++DA+ F EM+ +G+ P+
Sbjct: 456 VDDAMLIFTEMQQQGVSPD 474
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 159/396 (40%), Gaps = 57/396 (14%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A F + ++G SP ++ ++ R R + ++ F++M N Y ++
Sbjct: 459 AMLIFTEMQQQG-VSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSII 517
Query: 196 NRYA-------AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
+ A +V E I R D+ F +++ LC+ V A F+
Sbjct: 518 QGFCMHGGLVKAKELVSEMINKGIPRP------DIVFFSSVINSLCKDGRVMDAHDIFD- 570
Query: 249 EKNEFG--YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ G + T N +++G+C++G + +A + + EPD VTY T ++ K G
Sbjct: 571 LATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNG 630
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
++ L LF+ M KG KP+ VT ++ L R A + EM G V+ Y
Sbjct: 631 RINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYG 690
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNG 426
++ LC+ +C +E + +++
Sbjct: 691 IILGGLCR------------------NNC----------------ADEAIILFQKLGTMN 716
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
K S N ++ +++ + + + G+ P++ +Y VMI L G +EDA
Sbjct: 717 VKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDAN 776
Query: 487 SYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
+ F M G+VP R L+N + L E+GE K
Sbjct: 777 NMFSSMEKSGIVPGSR---LLNRIIRMLLEKGEIAK 809
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 89/224 (39%), Gaps = 10/224 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N +LD + R + + +F EM P+ V TYGI+L A A
Sbjct: 614 PDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTV---TYGIMLAGLFRAGRTVAA 670
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNG 266
F E G +S + +L LCR + A F+ + I +N ++N
Sbjct: 671 RKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINA 730
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ EAK + I S P+ TY + L K G + A +F +M + G P
Sbjct: 731 MYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPG 790
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
N II L K I +A L ++ + L +T + ++
Sbjct: 791 SRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLS 834
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 171/367 (46%), Gaps = 27/367 (7%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + +N +L R F+E +F +M PDL+ ++ L+ + +++
Sbjct: 287 SPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLI---SFSSLIGVSSRNGHLDQ 343
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCR----YKHVEVAETFFESEKNEFGYDIKTMNI 262
A+ F K G + D + L+ CR + +E+ + E D+ N
Sbjct: 344 ALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG---CALDVVAYNT 400
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
ILNG C + +A + ++++ PD T+ T ++ K+G +G AL LF M +K
Sbjct: 401 ILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKN 460
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
KPD+VT N +ID C + +A E+ EM +R PN +Y L+ C + + +
Sbjct: 461 IKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAF 520
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKS------LKKPEEVPWVLERMERNGCKMSTDTYNV 436
DEM +K P +T N ++K L K +E L +M G + TYN
Sbjct: 521 RLWDEMIRK--GIKPTLVTCNTVIKGYCRSGDLSKADEF---LGKMISEGVGPDSITYNT 575
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ +V + DK +ME KG+ PD +Y V+++G +GR+++A +M +G
Sbjct: 576 LINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERG 635
Query: 497 MVPEPRT 503
+ P+ T
Sbjct: 636 IDPDRST 642
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 161/337 (47%), Gaps = 12/337 (3%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+ A +F+ + G P + ++ +++ R E +++ D+M + ++ Y
Sbjct: 342 DQALMYFRDMKTSG-LVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNT 400
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKN 251
+LN ++ +A +FD E G + D F L+ C+ ++ A + F ++KN
Sbjct: 401 ILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKN 460
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
DI T NI+++G+C + +A W ++I K P+ ++YA VN G + A
Sbjct: 461 -IKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEA 519
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
RL+ M KG KP +VTCN +I C + +A E L +M + G P+ TYN+LI
Sbjct: 520 FRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLING 579
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
K + M+ + +++ME K P+ +T+N +L + +E +L +M G
Sbjct: 580 FVKGEYMDKAFFLINKMETK--GLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGID 637
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
TY ++ YV+ D + +EM ++G PD
Sbjct: 638 PDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 166/376 (44%), Gaps = 51/376 (13%)
Query: 173 VELIQVFDEMPDL--VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
VE+++ M V+ + +L+ Y A + E F + G L ++A +LL
Sbjct: 98 VEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLL 157
Query: 231 LWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
L + V++A E + E ++ ++ T+NI++N C + + K F D+ +
Sbjct: 158 GGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIF 217
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
D VTY T +NA ++G LG A + +M KG KP + T N +I+ LC K R A V
Sbjct: 218 ADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGV 277
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
EM + G P+ TTYN+L+ C+ + +M + S P+ I+F+ L+
Sbjct: 278 FNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVS--PDLISFSSLIGVS 335
Query: 410 KK--------------------PEEVPWVL------------------ERMERNGCKMST 431
+ P+ V + + ++M GC +
Sbjct: 336 SRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDV 395
Query: 432 DTYNVILKLYVNWDCEDKV----RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
YN IL N C+ K+ ++EM ++G+ PD ++T +IHG +G + ALS
Sbjct: 396 VAYNTIL----NGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALS 451
Query: 488 YFHEMRLKGMVPEPRT 503
F M K + P+ T
Sbjct: 452 LFGIMTQKNIKPDIVT 467
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 153/355 (43%), Gaps = 15/355 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N +++ R E +V + M P L TY ++N A GVF+
Sbjct: 223 YNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLF---TYNAVINGLCKKGRYVRAKGVFN 279
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
G D + + LL+ CR + +E + F + D+ + + ++ G
Sbjct: 280 EMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNG 339
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
++ +A +++D+ S PD+V Y +N + G + AL + M E+G DVV N
Sbjct: 340 HLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYN 399
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
I++ LC KK + +A + EM RG +P+ T+ +LI CK M M QK
Sbjct: 400 TILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQK 459
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCED 448
N P+ +T+N L+ K E+ E M + +Y +++ Y N
Sbjct: 460 NIK--PDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVS 517
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ W+EM +KG+ P + +I G G L A + +M +G+ P+ T
Sbjct: 518 EAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSIT 572
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 162/353 (45%), Gaps = 9/353 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + ++D L +A+ F VF +M D N TY L++ Y + +E + +
Sbjct: 236 PDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRM 295
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
+ G + + +LL +LC+ A FF+S + + T I+L+G+
Sbjct: 296 LEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYAT 355
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + E ++ + P+ + F +A K G + A+ +F M ++G PD V+
Sbjct: 356 KGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVS 415
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+IDALC R+ +A +M N G P++ ++SL+ LC + + E V E EM
Sbjct: 416 YGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEM- 474
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
N PN + FN +L +L K V +++ +E G + +YN ++ +
Sbjct: 475 -LNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGT 533
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ E M G+ PD SY ++HG GR++ A S+F +M G+ P
Sbjct: 534 IDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITP 586
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 140/315 (44%), Gaps = 10/315 (3%)
Query: 194 LLNRYAAAHMVEEAIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
LLN V EA+ V R E G + D ++ LL LC K E A ++
Sbjct: 135 LLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADD 194
Query: 253 FGY----DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ ++ + + ++NG+ G V + + +++ PD VTY T ++ L K
Sbjct: 195 QVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLF 254
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A +FQ M + G KP++ T NC+I + E + +L EM G PN TY SL
Sbjct: 255 DRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSL 314
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERN 425
+ +LCK R + D M K P+ T+ +L E+ +L M N
Sbjct: 315 LNYLCKNGRCREARFFFDSMIGK--GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVAN 372
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G + +N+ Y DK + +M ++G+ PD SY +I L GR++DA
Sbjct: 373 GISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDA 432
Query: 486 LSYFHEMRLKGMVPE 500
F++M +G+ P+
Sbjct: 433 EVKFNQMINEGVTPD 447
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 163/396 (41%), Gaps = 50/396 (12%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP ++FN + + + +F++M PD V +YG L++ V++
Sbjct: 375 SPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAV---SYGALIDALCKLGRVDD 431
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFES----------------- 248
A F++ G D+ F +L+ LC E V E FFE
Sbjct: 432 AEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILC 491
Query: 249 ------------------EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
E D+ + N +++G C+ G + EA + + ++ +P
Sbjct: 492 NLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKP 551
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
DS +Y T ++ K G++ +A F+ M G P VVT N I+ L KR EA E+
Sbjct: 552 DSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELY 611
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
M N G ++ TYN ++ LCK ++ + + K N ITFN ++ +L
Sbjct: 612 LNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQL--NIITFNIMIGALL 669
Query: 411 K---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
K E+ + + NG + TY ++++ + ++ + MEK G P+ +
Sbjct: 670 KGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 729
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ L +G + A +Y ++ + E T
Sbjct: 730 MLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST 765
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 153/339 (45%), Gaps = 27/339 (7%)
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGEL------DDLSAFQNLLLWLCRYKHVEVAETFFES 248
L R A ++G+ D K F EL + AF +LL + R + E+
Sbjct: 15 LERVIADRARSGSLGLGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESET 74
Query: 249 EKNEFGYDIK-----------TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
+ F ++ T +I++ +C +G++ + I+K+ D +
Sbjct: 75 VVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQ 134
Query: 298 FVNALTKKGKLGTALR-LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+N L ++G A+ L Q M E G PD V+ N ++ LC +KR EALE+L M +
Sbjct: 135 LLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADD 194
Query: 357 ---GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
C PNV +Y+++I +++ Y EM + P+ +T+ ++ L K +
Sbjct: 195 QVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDR--GIPPDVVTYTTVIDGLCKAQ 252
Query: 414 ---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
V ++M NG K + DTYN ++ Y++ +V EEM G P+ +Y
Sbjct: 253 LFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYG 312
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
+++ L GR +A +F M KG+ P T GI+++
Sbjct: 313 SLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLH 351
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 166/384 (43%), Gaps = 29/384 (7%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNE---KTYGI 193
++AY+ F+ + G +PG +N IL L + +RF E +++ M + + TY I
Sbjct: 570 DSAYSHFRKMLSNG-ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNI 628
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNE 252
+LN ++ V+EAI +F G ++ F ++ L + E A F + N
Sbjct: 629 ILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 688
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
++ T +++ G++ E + + K+ P+S V L +G + A
Sbjct: 689 LVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 748
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALC------FKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ E+ + T + +I K +P+ +L E + +
Sbjct: 749 AYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANS----------S 798
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERME 423
+LIK K +R++ Y EM K + P+ +T+N +L L + E + M
Sbjct: 799 ALIK---KARRIDDAYSLFREMLMKGLT--PDVVTYNTILHGLFQTGRFSEAKELYLSMI 853
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+ +M+ TYN+IL +C D+ ++ + KG+ + ++ +MI L GR E
Sbjct: 854 NSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKE 913
Query: 484 DALSYFHEMRLKGMVPEPRTGILV 507
DA+ F + G+VP+ T LV
Sbjct: 914 DAMDLFAAIPANGLVPDVVTYRLV 937
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 152/351 (43%), Gaps = 27/351 (7%)
Query: 107 GEIEKALNQCELTLTDDLIVNVINRYRF---------DWEAAYTFFKWVSREGDYSPGSN 157
G E A++ + L+ NV+ YR E + F + + G +P S
Sbjct: 672 GRKEDAMDLFAAIPANGLVQNVVT-YRLVVENLIEEGSLEEFDSLFSAMEKNGT-APNSQ 729
Query: 158 VFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
+ NA++ L G R + DE V T +L++ +++ A + +
Sbjct: 730 MLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKY 789
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNV 273
+ E + + + + + ++ A + F E D+ T N IL+G G
Sbjct: 790 RILNEANSSALIK-------KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRF 842
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EAK + +I S+ + + TY +N L K + A ++FQ++ KG + +++T N +
Sbjct: 843 SEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIM 902
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I AL R +A+++ + G +P+V TY + ++L + +E ME K+G
Sbjct: 903 IGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTME-KSG 961
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILKLY 441
+ L + + N L++ L + ++ L +++ + T + ++ L+
Sbjct: 962 TPLDSRL-LNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLF 1011
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALC---FKKRIPEALEVLREMKNR-------G 357
LG AL+LF + R VV N ++ A+ ++ E + + NR
Sbjct: 30 LGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIK 89
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL----KKPE 413
PN TY+ LI C++ +E + + K G + + I N LL L + E
Sbjct: 90 VAPNRCTYSILIGCFCRMGHLEHGFAAFG-LILKTGWRM-DHIVINQLLNGLCDGKRVGE 147
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK---VRHTWEEMEKKGMGPDQRSYT 470
+ +L+RM GC T +YN++LK N ++ + H + + P+ SY+
Sbjct: 148 AMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYS 207
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
+I+G + +G+++ + F EM +G+ P+ T V D
Sbjct: 208 TVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVID 246
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 168/351 (47%), Gaps = 19/351 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM-PDLV--NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N +L +L R E+ +V+ EM D++ N T ++N Y+ + EA +
Sbjct: 182 YNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIF 241
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFE------SEKNEFGYDIKTMNIILNGWCV 269
+ G D + +L+L CR V A F +NE Y I++G C
Sbjct: 242 QAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSY-----TTIIHGLCE 296
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + E +K + + C P TY ++AL + + LF M E+ +P+V T
Sbjct: 297 AGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHT 356
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
++DA+C ++++ E+ +L EM +G +P+V TYN+LI+ C+ R+E E L ME
Sbjct: 357 YTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLME 416
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDC 446
N C PNE T+N L+ K + V +L +M + S TYN ++ +
Sbjct: 417 SNN--CRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGH 474
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
D + +++ G+ PDQ +Y+V I L R+E+A F+ ++ KG+
Sbjct: 475 FDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGI 525
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 167/367 (45%), Gaps = 9/367 (2%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMV 204
RE D P + I+ L R +E + +F+EM + N TY ++++ +
Sbjct: 311 REDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKL 370
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNII 263
+E+ + + E G + + + L+ C +E A E E N + +T N +
Sbjct: 371 DESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNEL 430
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G+ +V++A +++SK P VTY + ++ K G +A +L + E G
Sbjct: 431 ICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGL 490
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD T + ID LC KR+ EA ++ +K +G N Y +LI CK +++
Sbjct: 491 VPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAIS 550
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
L+ M ++ CLPN T+N L+ + K +E ++E M + G K + TY ++++
Sbjct: 551 LLERMHSED--CLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEE 608
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ D + +M G PD +YT IH G +++A M G++P+
Sbjct: 609 MLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPD 668
Query: 501 PRTGILV 507
T L+
Sbjct: 669 SLTYTLL 675
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 154/363 (42%), Gaps = 15/363 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
RE P + + ++D + + R+ E ++ +EM P +V TY L+ Y
Sbjct: 346 RERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVV---TYNALIRGYCEE 402
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTM 260
+E A+ + + + + L+ + KHV A T +++ + T
Sbjct: 403 GRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTY 462
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N +++ C G+ A + + ++ PD TY+ F++ L K ++ A LF ++ E
Sbjct: 463 NSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKE 522
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KG K + V +ID C +I EA+ +L M + CLPN +TYNSLI +CK +++
Sbjct: 523 KGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQE 582
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVI 437
++ M + P T+ L++ + + + V +M G K TY
Sbjct: 583 GLSMVENMSKMGVK--PTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAF 640
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ Y + M + G+ PD +YT++I G DA + M G
Sbjct: 641 IHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGC 700
Query: 498 VPE 500
P
Sbjct: 701 DPS 703
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 148/350 (42%), Gaps = 41/350 (11%)
Query: 225 AFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
++ LL+ L R+ + E+ + E + +I T+N ++N + +GN+ EA + I
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240
Query: 284 IKSKCEPDS-----------------------------------VTYATFVNALTKKGKL 308
++ PDS V+Y T ++ L + G++
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
+ LF+ M E P V T II AL R E +++ EM+ R C PNV TY +
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERN 425
+ +CK ++++ L+EM +K +P+ +T+N L++ + + LE ME N
Sbjct: 361 VDAMCKERKLDESRRILNEMMEK--GLVPSVVTYNALIRGYCEEGRIEAALEILGLMESN 418
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
C+ + TYN ++ + K +M + + P +Y +IH G + A
Sbjct: 419 NCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSA 478
Query: 486 LSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
++ G+VP+ T + D K K E L G+K N
Sbjct: 479 YKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKAN 528
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 139/340 (40%), Gaps = 24/340 (7%)
Query: 43 KTLIP-IINLQARNSEFLFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTC 101
K L+P ++ A + GRIE A + L S+ +R + I C
Sbjct: 383 KGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELI----------C 432
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRF--------DWEAAYTFFKWVSREGDYS 153
S + + KA+ L L +++ +++AY + +E
Sbjct: 433 GFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLL-KENGLV 491
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P ++ +D L +++R E +F+ + + NE Y L++ + A ++EAI +
Sbjct: 492 PDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISL 551
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCV 269
+R L + S + +L+ +C+ V+ + E+ K + T I++
Sbjct: 552 LERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLR 611
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G+ A R + ++ +PD TY F++ G + A + M E G PD +T
Sbjct: 612 EGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLT 671
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+I A +A VL+ M + GC P+ +N+LI
Sbjct: 672 YTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
>gi|356557957|ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g43820-like [Glycine max]
Length = 505
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 163/370 (44%), Gaps = 19/370 (5%)
Query: 144 KWVSREGDYSPGSNV---FNAILDVLGRARRFVELIQVFDEMPDLVNEKTYG------IL 194
K R S SNV ++ I+ LGR R+F + + D + D+ G ++
Sbjct: 95 KLKGRAAIESALSNVAVXYHVIVKALGR-RKFFDFM--MDALCDMRRNAIDGDLFMLSVV 151
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG 254
++ + A V AI VF + G D A LLL LCR HV A + S K +
Sbjct: 152 VDSFVRAGHVSRAIQVFGNLDDLGVRRDTEALNVLLLCLCRRSHVGAANSVLNSMKGKVD 211
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
+D+ T N + GW G V E +R +++ PD T+ + L ++G++ A+ +
Sbjct: 212 FDVGTYNAVAGGWSRFGRVSEVERVMREMEADGLRPDCRTFGFLIEGLGREGRMDEAVEI 271
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
M E +PD T N +I E ++ M + C PN+ TY +I +
Sbjct: 272 LCGMKEMNCQPDTETYNAVIFNFVSVGDFEECIKYYNRMLSDNCEPNLDTYARMINRFLR 331
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMST 431
+++ DEM ++ +P+ T +K L P + ++ + GC +S
Sbjct: 332 ARKVADALLMFDEMLRR--GVVPSTGTITTFIKRLCSYGPPYAALMIYKKARKLGCVISM 389
Query: 432 DTYNVIL-KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
+ Y ++L +L + C + WEEM++ G D Y +I GL + G+LE+A+
Sbjct: 390 EAYKILLMRLSMVGKC-GTLLSIWEEMQECGYSSDLEVYECIISGLCNVGQLENAVLVME 448
Query: 491 EMRLKGMVPE 500
E KG P
Sbjct: 449 EALRKGFCPS 458
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 108/226 (47%), Gaps = 8/226 (3%)
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
D+ ++ + D + V++ + G + A+++F + + G + D N ++ LC +
Sbjct: 135 DMRRNAIDGDLFMLSVVVDSFVRAGHVSRAIQVFGNLDDLGVRRDTEALNVLLLCLCRRS 194
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ A VL MK + +V TYN++ + R+ V + EME P+ T
Sbjct: 195 HVGAANSVLNSMKGKVDF-DVGTYNAVAGGWSRFGRVSEVERVMREMEADG--LRPDCRT 251
Query: 402 FNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN-WDCEDKVRHTWEEM 457
F +L++ L + +E +L M+ C+ T+TYN ++ +V+ D E+ +++ + M
Sbjct: 252 FGFLIEGLGREGRMDEAVEILCGMKEMNCQPDTETYNAVIFNFVSVGDFEECIKY-YNRM 310
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
P+ +Y MI+ ++ DAL F EM +G+VP T
Sbjct: 311 LSDNCEPNLDTYARMINRFLRARKVADALLMFDEMLRRGVVPSTGT 356
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 4/234 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P F +++ LGR R E +++ M ++ + +TY ++ + + EE I
Sbjct: 247 PDCRTFGFLIEGLGREGRMDEAVEILCGMKEMNCQPDTETYNAVIFNFVSVGDFEECIKY 306
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCV 269
++R +L + ++ R + V A F E + T+ + C
Sbjct: 307 YNRMLSDNCEPNLDTYARMINRFLRARKVADALLMFDEMLRRGVVPSTGTITTFIKRLCS 366
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G Y A +K K C Y + L+ GK GT L +++ M E G D+
Sbjct: 367 YGPPYAALMIYKKARKLGCVISMEAYKILLMRLSMVGKCGTLLSIWEEMQECGYSSDLEV 426
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
CII LC ++ A+ V+ E +G P+ Y+ L L + E Y+
Sbjct: 427 YECIISGLCNVGQLENAVLVMEEALRKGFCPSRLVYSKLSNRLLASDKSERAYK 480
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 90/226 (39%), Gaps = 12/226 (5%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
+E + P + +NA++ F E I+ ++ M P+L TY ++NR+ A
Sbjct: 276 KEMNCQPDTETYNAVIFNFVSVGDFEECIKYYNRMLSDNCEPNL---DTYARMINRFLRA 332
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKT 259
V +A+ +FD G + + LC Y A ++ + + G ++
Sbjct: 333 RKVADALLMFDEMLRRGVVPSTGTITTFIKRLCSYGPPYAALMIYKKAR-KLGCVISMEA 391
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
I+L ++G W+++ + D Y ++ L G+L A+ + +
Sbjct: 392 YKILLMRLSMVGKCGTLLSIWEEMQECGYSSDLEVYECIISGLCNVGQLENAVLVMEEAL 451
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
KG P + + + + L + A ++ ++K L N Y
Sbjct: 452 RKGFCPSRLVYSKLSNRLLASDKSERAYKLFLKIKXARSLENAKKY 497
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 188/423 (44%), Gaps = 35/423 (8%)
Query: 85 YPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFK 144
YP D + +N ++K + KG+++KAL+ D L+ ++ + + T
Sbjct: 125 YPPDTVTLNT--LIK--GLCLKGQVKKALH-----FHDKLLAQ---GFQLNQVSYGTLIN 172
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMV 204
V + GD R ++L+Q D N Y +++ +V
Sbjct: 173 GVCKIGD-----------------TRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLV 215
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAETFFESEKNEFGYDIKTMNII 263
EA G+F G D+ + L+ C K E E ++ T NI+
Sbjct: 216 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ C G V EAK ++K+ +PD +TY+T ++ ++ A +F AM G
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PDV T +I+ C K + EAL + +EM + +P + TY+SLI LCK R+ V++
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWD 395
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
+DEM + N IT++ L+ L K + + +M+ G + +T T+ ++L
Sbjct: 396 LIDEMHDRGQPA--NVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDG 453
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ ++++ KG + +Y VMI G +G LE+AL+ +M G +P+
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPD 513
Query: 501 PRT 503
T
Sbjct: 514 AVT 516
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 146/310 (47%), Gaps = 6/310 (1%)
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNE 252
+L+ +A A+ + R + G DL L+ C + + K
Sbjct: 65 ILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ D T+N ++ G C+ G V +A F ++ + + V+Y T +N + K G A+
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAI 184
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+L Q + + KP+VV + IIDALC + + EA + EM +G +V TY++LI
Sbjct: 185 KLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 244
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
C +++ L+EM K + PN T+N L+ +L K +E VL M + K
Sbjct: 245 CIEGKLKEAIGLLNEMVLK--TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TY+ ++ Y K +H + M G+ PD +YT++I+G +++AL+ F
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362
Query: 490 HEMRLKGMVP 499
EM K MVP
Sbjct: 363 KEMHQKNMVP 372
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 111/216 (51%), Gaps = 9/216 (4%)
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
GY D T ++NG C+ G V +A F ++ + + V+Y T +N + K G A
Sbjct: 991 GYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAA 1050
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++L + + + KPDVV N IIDALC + + +A + EM +G +V TYN+LI
Sbjct: 1051 IKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYG 1110
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP-----EEVPWVLERMERNG 426
C + +++ L++M K + PN T+N L+ +L K +E +L +ME NG
Sbjct: 1111 FCIVGKLKEAIGLLNKMVLK--TINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNG 1168
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
CK + T+ +I+ D DKV EM +G+
Sbjct: 1169 CKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 118/243 (48%), Gaps = 6/243 (2%)
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
NV +A + ++ + P + + +++ K TA+ L + KG +PD++T N
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I+ C +I VL ++ RG P+ T N+LIK LC +++ + D++ +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCED 448
N++++ L+ + K + +L++++ K + Y+ I+ +
Sbjct: 159 GFQL--NQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVS 216
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILV 507
+ + EM KG+ D +Y+ +I+G +G+L++A+ +EM LK + P T ILV
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Query: 508 NDM 510
+ +
Sbjct: 277 DAL 279
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 7/232 (3%)
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
TA+ L + KG +PD+ T N +I+ C +I +L ++ RG P+ T+ +LI
Sbjct: 944 TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLI 1003
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNG 426
LC ++ + D++ + N++++ L+ + K + +L +++
Sbjct: 1004 NGLCLKGQVNKALHFHDKLLAQGFQL--NQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
K YN I+ K + EM KG+ D +Y +I+G G+L++A+
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121
Query: 487 SYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVI-KLTSLGLKGNA 536
++M LK + P RT ILV+ + + K+ ++ ++ K+ G K NA
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANA 1173
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAI 208
Y P + F +++ L + + + D++ +N+ +YG L+N AI
Sbjct: 992 YHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAI 1051
Query: 209 GVFDRRKEFGELD--DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
+ RK G L D+ + ++ LC+++ V A FFE D+ T N ++
Sbjct: 1052 KLL--RKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIY 1109
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK--LGTALRLFQAMWEKGR 323
G+C++G + EA ++ P+ TY V+AL K+GK L +L + M + G
Sbjct: 1110 GFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGC 1169
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
K + VT II AL K + ++L EM RG L
Sbjct: 1170 KANAVTFEIIISALFEKDENDKVEKLLHEMIARGLL 1205
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+ A FK + ++ + PG +++++D L ++ R + + DEM D N TY
Sbjct: 356 DEALNLFKEMHQK-NMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSS 414
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L++ ++ AI +F++ K+ G + F LL LC+ ++ A+ F+ +
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTK- 473
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
GY ++ T N++++G C G + EA + + C PD+VT+ + AL KK + G
Sbjct: 474 GYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGN 533
Query: 312 LRLFQAMWE-----KGRKPDV 327
+ + +WE KG P +
Sbjct: 534 VGFDKKVWEIVEHKKGETPSI 554
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 143/317 (45%), Gaps = 36/317 (11%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRF 279
D F LL LCR +E A K E G D N +++G+ + +A +F
Sbjct: 9 DAFTFAILLRGLCRSNQLEKARQLLGRMK-EMGCVPDDAIYNALISGYSKAKDFGQAFKF 67
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
+++K+ C P VTY V+ L K G+ A++L M +KG P++ T N I++ LC
Sbjct: 68 LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM----------- 388
++++ EA ++L EM RG P+V TYNS IK LCK R++ ++L M
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTT 187
Query: 389 -------------------EQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNG 426
+ N C P+ +T++ L+ K EV +L+ M + G
Sbjct: 188 VINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG 247
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
C+ + YN +L K EME++G PD SY I GL R++ A
Sbjct: 248 CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAK 307
Query: 487 SYFHEMRLKGMVPEPRT 503
+ F M +G P +
Sbjct: 308 AVFDRMVERGCTPNASS 324
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 195/437 (44%), Gaps = 52/437 (11%)
Query: 120 LTDDLIVN-VINRYRF--DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI 176
+ DD I N +I+ Y D+ A+ F + + P + I+D L +A R + +
Sbjct: 42 VPDDAIYNALISGYSKAKDFGQAFKFLAEMVKN-HCLPTVVTYTNIVDGLCKAGRTKDAV 100
Query: 177 QVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
++ DEM D N TY +++ ++EA + + G D+ + + + L
Sbjct: 101 KLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGL 160
Query: 234 CRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
C+ V+ A F + D+ + ++NG C G++ A R + C PD V
Sbjct: 161 CKCDRVDEARKFL--ARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVV 218
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY++ ++ K G++ A+ L +M + G +P++V N ++ AL I +A ++L EM
Sbjct: 219 TYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM 278
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
+ RG P+V +YN+ I LCK +R++ D M ++ C PN +++ L++ L K +
Sbjct: 279 ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG--CTPNASSYSMLVEELCKKK 336
Query: 414 EV----------------------PWVLERMERNG-----------------CKMSTDTY 434
E+ +L+ + + G C+ Y
Sbjct: 337 ELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFY 396
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
NV+L + DK ++M ++ + ++ +++HGL RL DA + M
Sbjct: 397 NVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVD 455
Query: 495 KGMVPEPRT-GILVNDM 510
+G +P+ T G LV+ M
Sbjct: 456 EGFIPDFVTYGTLVDAM 472
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 168/404 (41%), Gaps = 59/404 (14%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R+ SP +N I++ L R+ E ++ +EM PD+V TY +
Sbjct: 107 RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV---TYNSFIKGLCKC 163
Query: 202 HMVEEAIGVFDRRKEFGELD---DLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDI 257
V+EA RK + D+ ++ ++ LC+ ++ A + N D+
Sbjct: 164 DRVDEA------RKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDV 217
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T + +++G+C G V A ++K C P+ V Y + + AL + G +G A +
Sbjct: 218 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 277
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M +G PDVV+ N ID LC +R+ +A V M RGC PN ++Y+ L++ LCK K
Sbjct: 278 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKE 337
Query: 378 METVYEYLDEMEQK-----------------NGS-----------------CLPNEITFN 403
++ +++ +K G C P+ +N
Sbjct: 338 LDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYN 397
Query: 404 YLLKSLKKPEEVPWVLE----RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
+L S K ++ L+ +ERN C + T +N+++ D M
Sbjct: 398 VMLDSHCKRRQIDKALQIHKQMLERNCCNVVT--WNILVHGLCVDDRLSDAETMLLTMVD 455
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+G PD +Y ++ + G+ AL F E G VP+ T
Sbjct: 456 EGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVT 499
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 104/224 (46%), Gaps = 8/224 (3%)
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+I C+PD+ T+A + L + +L A +L M E G PD N +I K
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+A + L EM CLP V TY +++ LCK R + + LDEM K C PN T+
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKG--CSPNIYTY 118
Query: 403 NYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
N +++ L +K +E +LE M G TYN +K D D+ R M
Sbjct: 119 NVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP- 177
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ PD SYT +I+GL G L+ A +M +G P+ T
Sbjct: 178 --VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVT 219
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 160/351 (45%), Gaps = 17/351 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + +++ L ++ ++ D+M PD+V TY L++ + VE
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVV---TYSSLIDGFCKGGEVER 235
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
A+G+ D + G ++ A+ +LL L R H+ AE E E+ F D+ + N ++
Sbjct: 236 AMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACID 295
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C V +AK + +++ C P++ +Y+ V L KK +L A+ L + EK +
Sbjct: 296 GLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIV 355
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLRE-MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
D++ ++D LC R EA + + + + C P+V YN ++ CK ++++ +
Sbjct: 356 DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQI 415
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
+M ++N N +T+N L+ L + + +L M G TY ++
Sbjct: 416 HKQMLERNCC---NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAM 472
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+EE K G PD +Y+ +I GL + E+A F ++
Sbjct: 473 CKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 523
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 160/360 (44%), Gaps = 27/360 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N++L L R + + EM PD+V +Y ++ A V++A
Sbjct: 250 PNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVV---SYNACIDGLCKAERVKKA 306
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG-YDIKTMNIILNG 266
VFDR E G + S++ L+ LC+ K ++ A T E + ++ DI ++L+G
Sbjct: 307 KAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDG 366
Query: 267 WCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G EA + ++ K CEPD Y +++ K+ ++ AL++ + M E+
Sbjct: 367 LCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLER-NCC 425
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+VVT N ++ LC R+ +A +L M + G +P+ TY +L+ +CK + E
Sbjct: 426 NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELF 485
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNG----CKMSTDTYNVILKLY 441
+E + G C+P+ +T++ L+ L V E M K+ +N ++ Y
Sbjct: 486 EEAVK--GGCVPDVVTYSALITGL--------VHENMAEEAYLLFTKLDVALWNAMILGY 535
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG-LYDKGRLEDALSYFHEMRLKGMVPE 500
D + E+ + + P+ R++ I G L L A F G P+
Sbjct: 536 AENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPD 595
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 12/183 (6%)
Query: 175 LIQVFDE--MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
L+ + DE +PD V TYG L++ A+ +F+ + G + D+ + L+
Sbjct: 450 LLTMVDEGFIPDFV---TYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITG 506
Query: 233 LCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
L E A F D+ N ++ G+ G+ + + ++I+S EP++
Sbjct: 507 LVHENMAEEAYLLFTK------LDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNA 560
Query: 293 VTYATFVNA-LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
T+ ++ L K LG A LF + G PD+ N +ID + EA +
Sbjct: 561 RTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFY 620
Query: 352 EMK 354
MK
Sbjct: 621 SMK 623
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 173/383 (45%), Gaps = 12/383 (3%)
Query: 127 NVINRY--RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD 184
VIN + D + AY + + G P +++I+ L +A+ + ++V M
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRG-ILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK 262
Query: 185 ---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+ N +TY +++ Y ++ +EAIG + G D+ + +L+ +LC+
Sbjct: 263 NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322
Query: 242 AETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A F+S K +I T +L G+ G + E ++++ P+ ++ +
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A K+GK+ A+ +F M ++G PD VT +I LC R+ +A+ +M + P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PW 417
YNSLI LC + + E + EM + G CL + I FN ++ S K V
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICL-DTIFFNSIIDSHCKEGRVIESEK 500
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ + M R G K TY+ ++ Y D+ M GM PD +Y +I+G
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Query: 478 DKGRLEDALSYFHEMRLKGMVPE 500
R+EDAL F EM G+ P+
Sbjct: 561 KISRMEDALVLFREMESSGVSPD 583
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 149/346 (43%), Gaps = 40/346 (11%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N TYGIL+ A ++ + G + D AF +L LC K A
Sbjct: 90 NLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIV 149
Query: 247 ESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNAL 302
+ G ++ + NI+L G C EA + + C PD V+Y T +N
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K+G L A + M ++G P+VVT + II ALC + + +A+EVL M G +PN
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 363 TTYNSLIKHLCK----------IKRMET--------VYEYLDEMEQKNGSCLPNEITFNY 404
TYNS++ C +K+M + Y L + KNG C F+
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 405 LLKSLKKPE------------------EVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ K KPE E+ +L+ M RNG + +++++ Y
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
D+ + +M ++G+ PD +Y +I L GR+EDA+ YF +M
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 178/382 (46%), Gaps = 30/382 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P VF+ ++ + + + + VF +M PD V TYG ++ + VE+A
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV---TYGTVIGILCKSGRVEDA 428
Query: 208 IGVF----DRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNI 262
+ F D R G + + +L+ LC + + A E E D N
Sbjct: 429 MRYFEQMIDERLSPGNI----VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
I++ C G V E+++ + +++ +PD +TY+T ++ GK+ A +L +M G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
KPD VT N +I+ C R+ +AL + REM++ G P++ TYN +++ L + +R
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 383 E-YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC----KMSTDTYNVI 437
E Y+ E L T+N +L L K L RM +N C ++ T T+N++
Sbjct: 605 ELYVGITESGTQLELS---TYNIILHGLCKNNLTDEAL-RMFQNLCLTDLQLETRTFNIM 660
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + D+ + + + G+ PD R+Y++M L ++G LE+ F M G
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720
Query: 498 VPEPRTGILVNDMNIKLKERGE 519
R ++N + KL +RG+
Sbjct: 721 TANSR---MLNSIVRKLLQRGD 739
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 176/413 (42%), Gaps = 90/413 (21%)
Query: 168 RARRFVELIQVF-----DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
R++ +EL+Q+ D PD+V +Y ++N + +++A G + + G L +
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVV---SYTTVINGFFKEGDLDKAYGTYHEMLDRGILPN 233
Query: 223 LSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ + +++ LC+ + ++ A E KN + +T N I++G+C G EA F K
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+ EPD VTY + ++ L K G+ A ++F +M ++G KP++ T ++ K
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 342 -----------------------------------RIPEALEVLREMKNRGCLPNVTTYN 366
++ +A+ V +M+ +G P+ TY
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL------KKPEEVPWVLE 420
++I LCK R+E Y ++M + S P I +N L+ SL K +E+ +LE
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLS--PGNIVYNSLIHSLCIFDKWDKAKEL--ILE 469
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
++R C + T +N I+ + + ++ M + G+ PD +Y+ +I G G
Sbjct: 470 MLDRGIC-LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 481 RLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLK 533
++++A K + + S+G+K
Sbjct: 529 KMDEAT-----------------------------------KLLASMVSVGMK 546
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 4/218 (1%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE- 348
P+ TY + + G+L + +KG D + ++ LC KR +A++
Sbjct: 89 PNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDI 148
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
VLR M GC+PNV +YN L+K LC R + E L M G C P+ +++ ++
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 409 LKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
K ++ M G + TY+ I+ DK M K G+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
R+Y ++HG G+ ++A+ + +M G+ P+ T
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 45/278 (16%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
FN+I+D + R +E ++FD M PD++ TY L++ Y A ++EA +
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII---TYSTLIDGYCLAGKMDEATKLLA 538
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDI-------------- 257
G D + L+ C+ +E A F E E + DI
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598
Query: 258 ---------------------KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
T NIIL+G C EA R ++++ + + ++ T+
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 658
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+ AL K G+ A LF A+ G PDV T + + + L + + E ++ M+
Sbjct: 659 IMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEEN 718
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
GC N NS+++ L + + YL +++K+ S
Sbjct: 719 GCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS 756
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 171/355 (48%), Gaps = 15/355 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLVNEK---------TYGILLNRYAAAHMVEEAIG 209
+N +L L RR +L Q + D+ E +Y +++ A+ +EA+
Sbjct: 79 YNIVLAAL--CRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVA 136
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+ + G D+ + L+ LC ++ A E E + ++ + +L G+C
Sbjct: 137 LLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYC 196
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G + + ++++ + EPD + + F++ L KKG++G A+++ M ++G +P+VV
Sbjct: 197 RSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVV 256
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N +I+ LC + + EAL + EM ++G P+V TYN+LI L + M+ L+EM
Sbjct: 257 TYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEM 316
Query: 389 EQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
Q + P+ +TFN ++ L K + V E M GC + TYN ++ ++
Sbjct: 317 IQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVH 376
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ + E+ G+ PD +Y+++I+G ++ A + M +G+ E
Sbjct: 377 KVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAE 431
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 160/379 (42%), Gaps = 19/379 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
W+ F+ +SR G P +F +D L + R + ++V D M P++V
Sbjct: 201 WQDVSKVFEEMSRLG-VEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVV--- 256
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-- 247
TY +L+N V EA+ + + + G D+ + L+ L ++ A E
Sbjct: 257 TYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEM 316
Query: 248 -SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
D+ T N +++G C +G + +A + + + C + VTY + +
Sbjct: 317 IQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVH 376
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
K+ A+ L + G +PD T + +I+ + A LR M RG + Y
Sbjct: 377 KVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYI 436
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERME 423
L+ LC++ ME +EM+ +C + + ++ ++ K ++ +L+ M
Sbjct: 437 PLLAALCQLGMMEQAMVLFNEMDM---NCGLDAVAYSTMMYGACKSGDIKAAKQLLQDML 493
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G TY++++ ++ ++ ++M G PD + +I G +G++
Sbjct: 494 DEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQIN 553
Query: 484 DALSYFHEMRLKGMVPEPR 502
L HEMR K + +P+
Sbjct: 554 KILDLIHEMRAKNVAIDPK 572
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 14/277 (5%)
Query: 149 EGD--YSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHM 203
+GD P FN+++ L GR R+ + + ++ E + N TY L+ + H
Sbjct: 318 QGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHK 377
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNII 263
V A+ + G D + L+ + V+ AE F + + G + + I
Sbjct: 378 VNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRT-MTQRGIRAELFHYI 436
Query: 264 --LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
L C LG + +A + ++ C D+V Y+T + K G + A +L Q M ++
Sbjct: 437 PLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDE 495
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G PD VT + +I+ + EA VL++M G +P+V ++SLIK ++ +
Sbjct: 496 GLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKI 555
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV 418
+ + EM KN + P ++ ++ P+++P +
Sbjct: 556 LDLIHEMRAKNVAIDP-----KFICTLVRLPQQMPLL 587
>gi|116787233|gb|ABK24422.1| unknown [Picea sitchensis]
Length = 504
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 204/464 (43%), Gaps = 22/464 (4%)
Query: 83 QRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTF 142
Q P I + V NILK + IE LN L ++ + +V+ A F
Sbjct: 42 QYPPTTPIEVIVSNILKK---PPQMGIENTLNGLGLGVSIKFVEDVLKLSYGAGMEAMKF 98
Query: 143 FKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAA 200
F+W + +N ++D+LG + F + M + +V+ +T + Y
Sbjct: 99 FRWAGLKLSSKHSPLAWNLLVDLLGSDKLFDAMWDCIKIMKNQGIVSTETLSSVFGNYVQ 158
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM 260
A V+EA F+ +++G D+ A + LCRYK V+ A FF+S K D T
Sbjct: 159 AGKVDEARMTFEVMEQYGCRQDVVALNCYISALCRYKQVKAALEFFDSVKERIAPDADTY 218
Query: 261 NIILNGWCVLGNVYEAKR-FWKDIIKSKCEPDSVT-YATFVNALTKKGKLGTALRLFQAM 318
++L GW + GNV A+ F + I + P++ + Y F++ L ++ AL+ M
Sbjct: 219 ALLLEGWEIEGNVSNARSTFGEMIARLGWMPNNTSAYNAFLSTLVNGFQVDEALKYLGVM 278
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEA------LEVLREMKNRGCLPNVTTYNSLIKHL 372
K PD+ + L +K + E + + M+ G +P++ TYN++I
Sbjct: 279 KTKKCLPDLGFFRNTLQILYQRKAMKEPYGLWQLMSLWEFMRQSGIVPDLPTYNTMIGVC 338
Query: 373 CKIKRME--TVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG- 426
C ++ + Y LDEM P+ T+N + ++ +K EE + M +N
Sbjct: 339 CSANPIQVNSAYSLLDEMALTGA--FPDSKTYNTIFEAFITARKVEEASSIFREMTKNEF 396
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
C + + Y + +K+Y D + W M +K + P ++I G D GR+ AL
Sbjct: 397 CPLYAN-YVMAIKMYFEADDSEMAVMMWRHMIQKAIFPKSDCAAILIDGFLDLGRVSAAL 455
Query: 487 SYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSL 530
Y E +G+ T I + + +I+ ++ G+ IK+ S
Sbjct: 456 KYSLEAITRGVQIPVETMIKLKNASIQTGKQDAYGQLEIKMKSF 499
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 173/383 (45%), Gaps = 12/383 (3%)
Query: 127 NVINRY--RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD 184
VIN + D + AY + + G P +++I+ L +A+ + ++V M
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRG-ILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK 262
Query: 185 ---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+ N +TY +++ Y ++ +EAIG + G D+ + +L+ +LC+
Sbjct: 263 NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322
Query: 242 AETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A F+S K +I T +L G+ G + E ++++ P+ ++ +
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A K+GK+ A+ +F M ++G PD VT +I LC R+ +A+ +M + P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PW 417
YNSLI LC + + E + EM + G CL + I FN ++ S K V
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICL-DTIFFNSIIDSHCKEGRVIESEK 500
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ + M R G K TY+ ++ Y D+ M GM PD +Y +I+G
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Query: 478 DKGRLEDALSYFHEMRLKGMVPE 500
R+EDAL F EM G+ P+
Sbjct: 561 KISRMEDALVLFREMESSGVSPD 583
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 148/346 (42%), Gaps = 40/346 (11%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N TYGIL+ A ++ + G D AF LL LC K A
Sbjct: 90 NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149
Query: 247 ESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNAL 302
+ G ++ + NI+L G C EA + + C PD V+Y T +N
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K+G L A + M ++G P+VVT + II ALC + + +A+EVL M G +PN
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 363 TTYNSLIKHLCK----------IKRMET--------VYEYLDEMEQKNGSCLPNEITFNY 404
TYNS++ C +K+M + Y L + KNG C F+
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 405 LLKSLKKPE------------------EVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ K KPE E+ +L+ M RNG + +++++ Y
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
D+ + +M ++G+ PD +Y +I L GR+EDA+ YF +M
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 178/382 (46%), Gaps = 30/382 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P VF+ ++ + + + + VF +M PD V TYG ++ + VE+A
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV---TYGTVIGILCKSGRVEDA 428
Query: 208 IGVF----DRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNI 262
+ F D R G + + +L+ LC + + A E E D N
Sbjct: 429 MRYFEQMIDERLSPGNI----VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
I++ C G V E+++ + +++ +PD +TY+T ++ GK+ A +L +M G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
KPD VT N +I+ C R+ +AL + REM++ G P++ TYN +++ L + +R
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 383 E-YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC----KMSTDTYNVI 437
E Y+ E L T+N +L L K L RM +N C ++ T T+N++
Sbjct: 605 ELYVGITESGTQLELS---TYNIILHGLCKNNLTDEAL-RMFQNLCLTDLQLETRTFNIM 660
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + D+ + + + G+ PD R+Y++M L ++G LE+ F M G
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720
Query: 498 VPEPRTGILVNDMNIKLKERGE 519
R ++N + KL +RG+
Sbjct: 721 TANSR---MLNSIVRKLLQRGD 739
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 4/218 (1%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE- 348
P+ TY + + G+L + +KG + D + ++ LC KR +A++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
VLR M GC+PNV +YN L+K LC R + E L M G C P+ +++ ++
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 409 LKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
K ++ M G + TY+ I+ DK M K G+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
R+Y ++HG G+ ++A+ + +M G+ P+ T
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 176/413 (42%), Gaps = 90/413 (21%)
Query: 168 RARRFVELIQVF-----DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
R++ +EL+Q+ D PD+V +Y ++N + +++A G + + G L +
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVV---SYTTVINGFFKEGDLDKAYGTYHEMLDRGILPN 233
Query: 223 LSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ + +++ LC+ + ++ A E KN + +T N I++G+C G EA F K
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+ EPD VTY + ++ L K G+ A ++F +M ++G KP++ T ++ K
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 342 -----------------------------------RIPEALEVLREMKNRGCLPNVTTYN 366
++ +A+ V +M+ +G P+ TY
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL------KKPEEVPWVLE 420
++I LCK R+E Y ++M + S P I +N L+ SL K +E+ +LE
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLS--PGNIVYNSLIHSLCIFDKWDKAKEL--ILE 469
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
++R C + T +N I+ + + ++ M + G+ PD +Y+ +I G G
Sbjct: 470 MLDRGIC-LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 481 RLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLK 533
++++A K + + S+G+K
Sbjct: 529 KMDEAT-----------------------------------KLLASMVSVGMK 546
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 45/278 (16%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
FN+I+D + R +E ++FD M PD++ TY L++ Y A ++EA +
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII---TYSTLIDGYCLAGKMDEATKLLA 538
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDI-------------- 257
G D + L+ C+ +E A F E E + DI
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598
Query: 258 ---------------------KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
T NIIL+G C EA R ++++ + + ++ T+
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 658
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+ AL K G+ A LF A+ G PDV T + + + L + + E ++ M+
Sbjct: 659 IMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEEN 718
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
GC N NS+++ L + + YL +++K+ S
Sbjct: 719 GCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS 756
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 162/345 (46%), Gaps = 12/345 (3%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE---AIGVFDRRKEFGELDD 222
L RA +E ++V+ P+++ TY L++ Y + + A + G +
Sbjct: 171 LNRAGDVIEDMKVWGVSPNVI---TYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPN 227
Query: 223 LSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ L+ C+ ++V A F E ++ ++ T NI++NG C G V EA
Sbjct: 228 EVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRD 287
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
++ S EP+ VT+ +N K + A+ LF M ++G P+ +T +IDA C
Sbjct: 288 QMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDG 347
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
R+ +A + M +RG P V+TYN LI LC+ ++ ++EM K S + +T
Sbjct: 348 RMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLS--ADVVT 405
Query: 402 FNYLLKSL-KKPEEVPWV--LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
+N L+ SL KK E V L+ M G S TYN ++ Y ME
Sbjct: 406 YNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRME 465
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+KG + ++ V+I G KGRLEDA +EM +G+VP T
Sbjct: 466 RKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTT 510
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 167/342 (48%), Gaps = 12/342 (3%)
Query: 153 SPGSNVFNAILDV---LGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEE 206
SP +N ++D +GR + + + EM NE TY IL++ + V
Sbjct: 187 SPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSG 246
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILN 265
A+ VF + G ++ + L+ LC V+ A + ++ ++ T N+++N
Sbjct: 247 AMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLIN 306
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C V EA + D+ K +P+++TY T ++A K G++ A L+ M ++G P
Sbjct: 307 GFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFP 366
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+V T NC+I LC K + A ++ EM ++ +V TYN LI LCK + L
Sbjct: 367 EVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLL 426
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYV 442
DEM +K + P+ +T+N L+ + + L RMER G + + T+NV++K +
Sbjct: 427 DEMFEKGLN--PSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFC 484
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
+ EM ++G+ P++ +Y ++ + +KG + D
Sbjct: 485 LKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPD 526
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 172/375 (45%), Gaps = 21/375 (5%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGIL 194
D E +F W +E S + IL+ L +++ ++ D+ EK Y +
Sbjct: 11 DPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKY--EKDYSV- 67
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG 254
A H + + F ++ L+ +NL K + E F + F
Sbjct: 68 ---SAIFHAISMSGDSFCVNSILADMLVLAFVRNL-------KILRGFEAFKRAGDYGFK 117
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
+ + N +L+G + + ++++IK K E + +++ VN L K GKL A +
Sbjct: 118 LSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDV 177
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPE---ALEVLREMKNRGCLPNVTTYNSLIKH 371
+ M G P+V+T N +ID C RI + A +L+EM +G PN TYN LI
Sbjct: 178 IEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDG 237
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
CK + + EM+++ PN +T+N L+ L K +E + ++M + +
Sbjct: 238 FCKDENVSGAMRVFGEMQRQ--GLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLE 295
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+ T+NV++ + ++ + + +MEK+G+ P+ +YT +I GR+EDA +
Sbjct: 296 PNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFAL 355
Query: 489 FHEMRLKGMVPEPRT 503
++ M +G+ PE T
Sbjct: 356 YNMMIDRGIFPEVST 370
>gi|255561709|ref|XP_002521864.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538902|gb|EEF40500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 428
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 159/357 (44%), Gaps = 30/357 (8%)
Query: 93 NVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDY 152
NV + + + +EKALNQ L LT DL+V V+ R RF+ + A+ FF W R+ +Y
Sbjct: 43 NVADKTYAVVMESSNHMEKALNQLNLELTTDLVVEVLLRLRFEEKIAFRFFMWAGRQQNY 102
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI--------LLNRYAAAHMV 204
+ +N ++D+L + V+ ++ +M D + I +L Y ++
Sbjct: 103 THEPCAYNEMMDILSSTKYKVKQFRIVCDMLDYMKRNNKNIVPVEVLLTILRNYTQKYLT 162
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
+R +++AF LL LC+ VE AET F+ KN+
Sbjct: 163 HVQKFAKKKRIRVKTQPEINAFNLLLDALCKCSLVEDAETIFKRVKNKND---------- 212
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ E + +I S C PD TY + + GK+ A R+ Q M KG
Sbjct: 213 -------RMDECSKLLGHMINSGCLPDVSTYKELMEGMCLAGKIDEAYRVLQEMGNKGYP 265
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD+VT NC + LC + EAL + M CLP+V TYN LI ++ + ++
Sbjct: 266 PDIVTYNCFLKVLCENMKSDEALRLYGRMIEVDCLPSVQTYNMLISMYFEMGDPDGAFDT 325
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
DEM N C + T++ ++ L K ++ ++E + G K+ ++ L
Sbjct: 326 WDEMH--NRGCAKDIDTYSVMIDGLFGCNKVQDACLLIEDVMTKGMKLPYQKFDSFL 380
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 324 KPDVVTCNCIIDALC-----------FKK------RIPEALEVLREMKNRGCLPNVTTYN 366
+P++ N ++DALC FK+ R+ E ++L M N GCLP+V+TY
Sbjct: 178 QPEINAFNLLLDALCKCSLVEDAETIFKRVKNKNDRMDECSKLLGHMINSGCLPDVSTYK 237
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERME 423
L++ +C +++ Y L EM K P+ +T+N LK L K +E + RM
Sbjct: 238 ELMEGMCLAGKIDEAYRVLQEMGNKGYP--PDIVTYNCFLKVLCENMKSDEALRLYGRMI 295
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
C S TYN+++ +Y D TW+EM +G D +Y+VMI GL+ +++
Sbjct: 296 EVDCLPSVQTYNMLISMYFEMGDPDGAFDTWDEMHNRGCAKDIDTYSVMIDGLFGCNKVQ 355
Query: 484 DALSYFHEMRLKGM 497
DA ++ KGM
Sbjct: 356 DACLLIEDVMTKGM 369
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/500 (24%), Positives = 219/500 (43%), Gaps = 70/500 (14%)
Query: 63 RIETAQLVHSLANSDEKSEFQRYPGDEIAINVQ-NILKTCS-----VSTKGEIEKALNQC 116
R+E LV SL +K E ++ P D + N+ +CS +ST G+I K Q
Sbjct: 89 RMERPDLVISLY---QKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQP 145
Query: 117 ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI 176
++ L+ + R A F + R P F +++ L R R VE +
Sbjct: 146 DVVTFSTLLHGLCVEDRV--SEALDLFHQMCR-----PNVVTFTTLMNGLCREGRVVEAV 198
Query: 177 QVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL-DDLSAFQNLL-- 230
+ D M + N+ TYG +++ A+ + + +E + ++ + ++
Sbjct: 199 ALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDG 258
Query: 231 LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
LW +H + + E ++ D+ T N +++G+C G EA+R +++++ K P
Sbjct: 259 LWK-DGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINP 317
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+ VTY+ +NA K+ K A L+ M +G P+ +T N +ID C + R+ A +
Sbjct: 318 NVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMF 377
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK-------------NGSCL- 396
M +GC P+V T+N+LI C KR++ E L EM + +G CL
Sbjct: 378 YVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLV 437
Query: 397 -------------------PNEITFNYLLKSL---KKPEEVPWVLERMER---------- 424
P+ +T N LL L K ++ + + M++
Sbjct: 438 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRP 497
Query: 425 -NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
NG + TYN+++ +N + ++EM +G+ P+ +Y+ MI+GL + RL+
Sbjct: 498 FNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLD 557
Query: 484 DALSYFHEMRLKGMVPEPRT 503
+A F M K P+ T
Sbjct: 558 EATQMFDSMGSKSFSPDVVT 577
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 165/366 (45%), Gaps = 49/366 (13%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P ++A+++ + R+F E +++DEM + N TY +++ + + ++ A
Sbjct: 316 NPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEH 375
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+F G D+ F L+ C K ++ E E + D T N +++G+C
Sbjct: 376 MFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFC 435
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK------- 321
++G++ A + +I S PD VT T ++ L GKL AL +F+AM +
Sbjct: 436 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 495
Query: 322 ----GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
G +PDV T N +I L + + EA E+ +EM +RG +PN TY+S+I LCK R
Sbjct: 496 RPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSR 555
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVI 437
++ + D M K+ S P+ +TFN L+ K V LE
Sbjct: 556 LDEATQMFDSMGSKSFS--PDVVTFNTLVSGYCKAGRVDDGLE----------------- 596
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ EM ++G+ D +Y +IHG G + AL F EM G+
Sbjct: 597 ---------------LFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGV 641
Query: 498 VPEPRT 503
P+ T
Sbjct: 642 YPDTIT 647
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 138/302 (45%), Gaps = 18/302 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+AA F ++ +G SP FN ++D A+R + ++ EM + + + TY
Sbjct: 371 DAAEHMFYVMATKG-CSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK--- 250
L++ + + A+ + + G D+ LL LC ++ A F++ +
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489
Query: 251 ---------NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
N D++T NI+++G G EA+ +K++ P+++TY++ +N
Sbjct: 490 MDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMING 549
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K+ +L A ++F +M K PDVVT N ++ C R+ + LE+ EM RG + +
Sbjct: 550 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVAD 609
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER 421
TY +LI K+ + + EM + P+ IT +L L EE+ +
Sbjct: 610 AITYITLIHGFRKVGNINGALDIFQEM--ISSGVYPDTITIRSMLTVLWSKEELKRAVAM 667
Query: 422 ME 423
+E
Sbjct: 668 LE 669
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 127/274 (46%), Gaps = 11/274 (4%)
Query: 231 LWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
L+ R +A+ + E E G+ +++ + +G+ + + +A + D+++S+ P
Sbjct: 17 LFCTRSIRHALAKKSRDGESGEAGFRGESLKL-RSGFHEIKGLEDAIDLFSDMVRSRPLP 75
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+ + + + + + + L+Q M K DV + N +I C ++P AL
Sbjct: 76 SVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTF 135
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL- 409
++ G P+V T+++L+ LC R V E LD Q C PN +TF L+ L
Sbjct: 136 GKITKLGFQPDVVTFSTLLHGLCVEDR---VSEALDLFHQM---CRPNVVTFTTLMNGLC 189
Query: 410 --KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG-MGPDQ 466
+ E +L+RM +G + + TY I+ + +ME+ + P+
Sbjct: 190 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNV 249
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
Y+ +I GL+ GR DA + + EM+ KG+ P+
Sbjct: 250 VIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPD 283
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+ +TY IL++ EA ++ G + + + +++ LC+ ++ A
Sbjct: 503 PDV---QTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEA 559
Query: 243 ETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
F+S ++ F D+ T N +++G+C G V + + ++ + D++TY T ++
Sbjct: 560 TQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHG 619
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
K G + AL +FQ M G PD +T ++ L K+ + A+ +L +++
Sbjct: 620 FRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 179/408 (43%), Gaps = 44/408 (10%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D A + + R+G P + +N ++ + RA R + ++VFDEM + L N TY
Sbjct: 175 DLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITY 234
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
+++ + +E + D+ G + + LL LCR + + +
Sbjct: 235 NTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMAS 294
Query: 252 E----------------------------FGYDIK--------TMNIILNGWCVLGNVYE 275
+ FG +K T +I+LNG C G V
Sbjct: 295 QKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSI 354
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A+ + ++ + P V Y T +N + G+L A F M + KPD +T N +I+
Sbjct: 355 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 414
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
LC +RI A ++L EM++ G P V T+N+LI + ++E + L EM Q+NG
Sbjct: 415 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM-QENG-L 472
Query: 396 LPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
PN +++ ++ + K ++P +L+ M + YN I+ YV D+
Sbjct: 473 KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFI 532
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
E+M+ G+ P +Y ++I GL ++ ++ +A + + ++P+
Sbjct: 533 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 580
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 163/376 (43%), Gaps = 10/376 (2%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D EA ++ + G P + +N +L L RA R E + DEM + + TY
Sbjct: 246 DLEAGFSLRDQMVCHG-LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 304
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
IL + + + + +F + + G LL LC+ V +AE +S N
Sbjct: 305 SILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 364
Query: 252 EFGYDIKTM-NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ + N ++NG+C G + A + + +PD +TY +N L K ++
Sbjct: 365 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 424
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L M + G P V T N +IDA ++ + VL EM+ G PNV +Y S++
Sbjct: 425 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 484
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--KKPEEVPWVL-ERMERNGC 427
CK ++ LD+M K+ LPN +N ++ + P + ++L E+M+ NG
Sbjct: 485 AFCKNGKIPEAVAILDDMFHKD--VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 542
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
S TYN+++K N + + + PD SY +I +G ++ AL
Sbjct: 543 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 602
Query: 488 YFHEMRLKGMVPEPRT 503
M G+ RT
Sbjct: 603 LQQRMHKYGIKSTVRT 618
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 159/380 (41%), Gaps = 49/380 (12%)
Query: 91 AINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRY--RFDWEAAY-TFFKWVS 147
+I + + K VS E+ ++L L T + +IN Y + E A+ TF + S
Sbjct: 340 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 399
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-LVNE--KTYGILLNRYAAAHMV 204
R P +NA+++ L +A R + EM D VN +T+ L++ Y +
Sbjct: 400 RH--IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 457
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
E+ V E ++N ++ + I+
Sbjct: 458 EKCFIVLS----------------------------------EMQENGLKPNVVSYGSIV 483
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N +C G + EA D+ P++ Y ++A + G A L + M G
Sbjct: 484 NAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 543
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P +VT N +I LC + +I EA E++ + N +P+ +YN+LI C ++ +
Sbjct: 544 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID---KA 600
Query: 385 LDEMEQKNGSCLPNEI-TFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKL 440
LD ++ + + + + T++ L+ L E+ ++ ++M +N S +N++++
Sbjct: 601 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEA 660
Query: 441 YVNWDCEDKVRHTWEEMEKK 460
Y + E K +EM +K
Sbjct: 661 YSKYGNEIKAEDLRKEMLQK 680
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 125/308 (40%), Gaps = 23/308 (7%)
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-------------EKNEFGYDIK 258
D R+ FG L A + W + A E+ N F Y
Sbjct: 143 DVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY--- 199
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
N+++ G G +A + ++ + P+ +TY T ++ K G L L M
Sbjct: 200 --NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQM 257
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
G KP+ +T N ++ LC R+ E +L EM ++ +P+ TY+ L L +
Sbjct: 258 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 317
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYN 435
+ + + KNG + + T + LL L K +V VL+ + G + YN
Sbjct: 318 KAMLSLFGK-SLKNGVTI-GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 375
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++ Y + T+ +M+ + + PD +Y +I+GL R+ +A EM+
Sbjct: 376 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 435
Query: 496 GMVPEPRT 503
G+ P T
Sbjct: 436 GVNPTVET 443
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 108/271 (39%), Gaps = 45/271 (16%)
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP-DVVT 329
G + +R + + + PD+ + V A G LG A+ + + M G P + +
Sbjct: 139 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I + R +A+EV EM R LPN TYN++I K +E + D+M
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD--TYNVIL------ 438
PN IT+N LL L + E +L+ M KM D TY+++
Sbjct: 259 CH--GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ--KMVPDGFTYSILFDGLSRN 314
Query: 439 -------------------------KLYVNWDCEDKVRHTWEE----MEKKGMGPDQRSY 469
+ +N C+D EE + G+ P + Y
Sbjct: 315 GDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 374
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+I+G G LE A S F +M+ + + P+
Sbjct: 375 NTLINGYCQTGELEGAFSTFGQMKSRHIKPD 405
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 159/360 (44%), Gaps = 37/360 (10%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N TY LL + H ++A VF + D F LL LCR +E A
Sbjct: 6 NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65
Query: 247 ESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
K E G D N +++G+ + +A +F +++K+ C P VTY V+ L K
Sbjct: 66 GRMK-EMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCK 124
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
+ A++L M +KG P++ T N I++ LC ++++ EA ++L EM RG P+V T
Sbjct: 125 AERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVT 184
Query: 365 YNSLIKHLCKIKRMETVYEYLDEM------------------------------EQKNGS 394
YNS IK LCK R++ ++L M N
Sbjct: 185 YNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRG 244
Query: 395 CLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
C P+ +T++ L+ K EV +L+ M + GC+ + YN +L K
Sbjct: 245 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAE 304
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
EME++G PD SY I GL R++ A + F M +G P + +L+ D+
Sbjct: 305 DMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDI 364
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 189/412 (45%), Gaps = 27/412 (6%)
Query: 120 LTDDLIVN-VINRYRF--DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI 176
+ DD I N +I+ Y D+ A+ F + + P + I+D L +A R + +
Sbjct: 74 VPDDAIYNALISGYSKAKDFGQAFKFLAEMVKN-HCLPTVVTYTNIVDGLCKAERTRDAV 132
Query: 177 QVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
++ DEM D N TY +++ ++EA + + G D+ + + + L
Sbjct: 133 KLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGL 192
Query: 234 CRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
C+ V+ A F + D+ + ++NG C G++ A R + C PD V
Sbjct: 193 CKCDRVDEARKFL--ARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVV 250
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY++ ++ K G++ A+ L +M + G +P++V N ++ AL I +A ++L EM
Sbjct: 251 TYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM 310
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL------- 406
+ RG P+V +YN+ I LCK +R++ D M ++ C PN +++ L+
Sbjct: 311 ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER--GCTPNASSYSMLIVDILLYT 368
Query: 407 -------KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
K + E + ++ C+ YNV+L + DK ++M +
Sbjct: 369 VLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE 428
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
K + ++ +++HGL RL DA + M +G +P+ T G LV+ M
Sbjct: 429 KNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAM 479
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 161/377 (42%), Gaps = 30/377 (7%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R+ SP +N I++ L R+ E ++ +EM PD+V TY +
Sbjct: 139 RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV---TYNSFIKGLCKC 195
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTM 260
V+EA R D+ ++ ++ LC+ ++ A + N D+ T
Sbjct: 196 DRVDEARKFLAR---MPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTY 252
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+ +++G+C G V A ++K C P+ V Y + + AL + G +G A + M
Sbjct: 253 SSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMER 312
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI----------K 370
+G PDVV+ N ID LC +R+ +A V M RGC PN ++Y+ LI
Sbjct: 313 RGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLD 372
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL----ERMERNG 426
LCK R + ++ + C P+ +N +L S K ++ L + +E+N
Sbjct: 373 GLCKGGRFDEACALFSKVLDEK-ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC 431
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
C + T+N+++ D M +G PD +Y ++ + G+ AL
Sbjct: 432 CNVV--TWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAAL 489
Query: 487 SYFHEMRLKGMVPEPRT 503
F E G VP+ T
Sbjct: 490 ELFEEAVKGGCVPDVVT 506
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 5/207 (2%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
E + TY + LT++ + A +FQ M +K +PD T ++ LC ++ +A +
Sbjct: 4 EHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARK 63
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+L MK GC+P+ YN+LI K K +++L EM + + CLP +T+ ++
Sbjct: 64 LLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH--CLPTVVTYTNIVDG 121
Query: 409 LKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L K E + +L+ M GC + TYNVI++ D+ + EEM +G PD
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEM 492
+Y I GL R+++A + M
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM 208
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 17/251 (6%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-------------LVNEKTYGILLNRY 198
++P +NA +D L +A R + VFD M + +V+ Y +LL+
Sbjct: 315 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGL 374
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL-WLCRYKHVEVAETFFESEKNEFGYDI 257
+EA +F + + + F N++L C+ + ++ A + + ++
Sbjct: 375 CKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNV 434
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T NI+++G CV + +A+ ++ PD VTY T V+A+ K GK AL LF+
Sbjct: 435 VTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEE 494
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL---IKHLCK 374
+ G PDVVT + +I L + EA + ++ R +P+ T L +K L K
Sbjct: 495 AVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNK 554
Query: 375 IKRMETVYEYL 385
++ E V YL
Sbjct: 555 PRKAEVVDLYL 565
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 163/355 (45%), Gaps = 14/355 (3%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
++ I++ L + R E ++ ++M PD + TYG ++ R +++A+ +
Sbjct: 82 AYSTIINWLCKLNRVEEARELIEKMARYAPPDAL---TYGPIVERLCKTKRIDDALATVE 138
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLG 271
G D + +L LC+ + VE A FE K ++ T N ++NG C
Sbjct: 139 EMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAW 198
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ A +K++ P V+Y T ++ KK L A +F M P+VVT
Sbjct: 199 RIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYT 258
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+ID L ++ A EVL M +G PNV TY+ LI CK++R++ ++ L++M +
Sbjct: 259 TLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQ 318
Query: 392 NGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
+ P +T+N LL SL K E+ + M + C + TYN +L+ + D
Sbjct: 319 GIA--PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLD 376
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ EM KG PD +Y + GL G++ +A +M+L P R+
Sbjct: 377 GAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNPFGRS 431
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 161/347 (46%), Gaps = 12/347 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
PG+ FN + D +A R ++ +V+ M + + YGIL++ +EA +
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 211 FD--RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
R K F A+ ++ WLC+ VE A E D T I+ C
Sbjct: 68 LHTMRLKRFKR--KAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLC 125
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+ +A +++ +PD+ Y ++ L ++ K+ A LF+ M ++ P+VV
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N +I+ LC RI A E+ +EM +G +P +YN+LI CK K + + D+M
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWD 445
+ N C+PN +T+ L+ L K +V VL+ M + G + TY+ ++ +
Sbjct: 246 VRSN--CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVR 303
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
D+ E+M +G+ P +Y ++++ L +LEDA F M
Sbjct: 304 RVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 350
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 149/347 (42%), Gaps = 42/347 (12%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
T+ + + +A A +E+ V+ E G S + L+ LC+ + + A +
Sbjct: 12 TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71
Query: 250 K-NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ F + I+N C L V EA+ + + + PD++TY V L K ++
Sbjct: 72 RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY-APPDALTYGPIVERLCKTKRI 130
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL + M +G KPD N ++ LC ++++ EA + +M + PNV TYN+L
Sbjct: 131 DDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTL 190
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERN 425
I LCK R+ET YE EM K +P E+++N L+ K +++ V ++M R+
Sbjct: 191 INGLCKAWRIETAYELFKEMAGKG--YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS 248
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
C P+ +YT +I GL G+++ A
Sbjct: 249 NCV-----------------------------------PNVVTYTTLIDGLSKSGKVQAA 273
Query: 486 LSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGL 532
M KG+ P T + D K++ E K + ++ + G+
Sbjct: 274 AEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGI 320
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 123/257 (47%), Gaps = 6/257 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
EA F K V + +P +N +++ L +A R ++F EM + E +Y
Sbjct: 167 EARLLFEKMVKQR--INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNT 224
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNE 252
L++ + + A VFD+ + ++ + L+ L + V+ A + K
Sbjct: 225 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 284
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
++ T + +++G+C + V EA + + ++ P VTY +N+L + KL A
Sbjct: 285 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAF 344
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+LF+ M ++ P VVT N ++ ALC K++ A + EM +GC P+ TY++L L
Sbjct: 345 KLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGL 404
Query: 373 CKIKRMETVYEYLDEME 389
+ ++ E +++M+
Sbjct: 405 TRAGKVHEAQELMEKMK 421
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 46/231 (19%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E AY FK ++ +G Y P +N ++D + + V VFD+M P++V T
Sbjct: 201 ETAYELFKEMAGKG-YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVV---T 256
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y L++ + + V+ A V D + G +++ + L+ C+ + V+ A E
Sbjct: 257 YTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMV 316
Query: 251 NE-FGYDIKTMNIILNGWCVLGNVYEA--------------------------------- 276
+ + T NI+LN C + +A
Sbjct: 317 TQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLD 376
Query: 277 --KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
R + ++I C PD++TY T LT+ GK+ A L + M R P
Sbjct: 377 GAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
M R +P T+N++ K R+E V E M + + + + L+ L K
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRAS--GYGILISCLCKV 58
Query: 413 ---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE-DKVRHTWEEMEKKG--MGPDQ 466
+E +L M K Y+ I +NW C+ ++V E +EK PD
Sbjct: 59 GNFDEAYKLLHTMRLKRFKRKAIAYSTI----INWLCKLNRVEEARELIEKMARYAPPDA 114
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+Y ++ L R++DAL+ EM +G+ P+
Sbjct: 115 LTYGPIVERLCKTKRIDDALATVEEMATRGIKPD 148
>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 3/247 (1%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DL-VN 187
R+ FF W S + + FN ++D G+ R F V D M D+ +
Sbjct: 122 RHGIPVPQVLAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEIT 181
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
+T+ IL+ RY A + EAI F+R +++ D AF L+ LCR + A+ FF+
Sbjct: 182 VETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFD 241
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
S K++F D+ ++ GWC GN+ EA+R + ++ + +P+ TY+ +++L + G+
Sbjct: 242 SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQ 301
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A +F M + G +P+ +T N ++ R + L+V +MK GC P+ TYN
Sbjct: 302 ITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNF 361
Query: 368 LIKHLCK 374
LI+ CK
Sbjct: 362 LIETHCK 368
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 10/196 (5%)
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
++T +I++ + G EA + + C+PD + ++ ++ L +K + A F
Sbjct: 182 VETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFD 241
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
++ +K +PDV+ ++ C I EA V EMK G PNV TY+ +I LC+
Sbjct: 242 SLKDKF-EPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCG 300
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDT 433
++ ++ EM + C PN IT+N L++ + E+V V +M+R GC+ T T
Sbjct: 301 QITRAHDVFAEM--LDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVT 358
Query: 434 YNVILKLYVNWDCEDK 449
YN +++ + C+D+
Sbjct: 359 YNFLIETH----CKDE 370
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 131/567 (23%), Positives = 233/567 (41%), Gaps = 78/567 (13%)
Query: 13 REHFQQKFKFHSQLTTQFSKLQSCNSVTSHKTLIPIIN---LQARNSEFLF--------- 60
+ H Q+ T Q + NS + +TL+ + QA+ F F
Sbjct: 24 KRHPQRLASLSPHFTPQAASYVLLNSQSDQRTLLNFLTWAQAQAQAHNFFFTPHCKCLAL 83
Query: 61 --LGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCEL 118
L R + + HSLA +D + G + ++ + CS
Sbjct: 84 HILVRFKLYRTAHSLA-ADLAATLPDPTGASLFRHLHDTFHLCSSPFSS----------- 131
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR-----ARRFV 173
+ DL+V ++R F A T +R G ++P +NA+LD L R R +
Sbjct: 132 SAVFDLVVKSLSRLGF-VPKALTLLHLANRHG-FAPTVLSYNAVLDALLRRSSSNHRDYD 189
Query: 174 ELIQVFDEM------PDLV--------------------------------NEKTYGILL 195
+ +VF +M P++ N TY L+
Sbjct: 190 DAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLI 249
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAETFFESEKNEFG 254
+ V+EA+ + G +L ++ +++ LC + + EV E E
Sbjct: 250 DASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLV 309
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D T N ++NG+C GN+++ +++ P+ VTY T +N + K G L A+ +
Sbjct: 310 PDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEI 369
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M +G +P+ T +ID C K + EA +VL EM G P+V TYN+L+ C
Sbjct: 370 FDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCF 429
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMST 431
+ R++ L M ++ P+ ++++ ++ + E+ E M G T
Sbjct: 430 LGRVQEAVGILRGMVER--GLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDT 487
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TY+ +++ + + EM ++G+ PD+ +YT +I+ G L AL E
Sbjct: 488 VTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDE 547
Query: 492 MRLKGMVPEPRT-GILVNDMNIKLKER 517
M +G +P+ T +L+N +N K + +
Sbjct: 548 MVQRGFLPDNVTYSVLINGLNKKARTK 574
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 151/329 (45%), Gaps = 29/329 (8%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETF 245
N TY L+N A + A+ +FD+ + G + + L+ C+ + E +
Sbjct: 346 NVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVL 405
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E + F + T N +++G+C LG V EA + +++ PD V+Y+T + ++
Sbjct: 406 SEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRE 465
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
+LG A ++ + M EKG PD VT + +I LC ++++ EA ++ REM RG P+ TY
Sbjct: 466 RELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTY 525
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK-------------- 411
SLI C + DEM Q+ LP+ +T++ L+ L K
Sbjct: 526 TSLINAYCVDGELSKALRLHDEMVQR--GFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583
Query: 412 ------PEEVPW--VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
P++V + ++E N K + ++K + ++ ++ M ++
Sbjct: 584 FYEESVPDDVTYNTLIENCSNNEFK----SVEGLVKGFCMKGLMNEADRVFKTMLQRNHK 639
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
P+ Y +MIHG G + A + + E+
Sbjct: 640 PNAAIYNLMIHGHSRGGNVHKAYNLYMEL 668
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 153/340 (45%), Gaps = 32/340 (9%)
Query: 152 YSPGSNVFNAILD---VLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVE 205
+SP +NA++ LGR + V +++ E PD+V +Y ++ + +
Sbjct: 413 FSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVV---SYSTVIAGFCRERELG 469
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
+A + + E G L D + +L+ LC + K VE + F E + D T ++
Sbjct: 470 KAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLI 529
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N +CV G + +A R ++++ PD+VTY+ +N L KK + A RL ++ +
Sbjct: 530 NAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESV 589
Query: 325 PDVVTCNCIID---------------ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
PD VT N +I+ C K + EA V + M R PN YN +I
Sbjct: 590 PDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMI 649
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
+ + Y E+E + +C + + L+K+L + +E+ +L+ + R+
Sbjct: 650 HGHSRGGNVHKAYNLYMELEHSSFAC--HTVAVIALVKALAREGMNDELSRLLQNILRS- 706
Query: 427 CKMS-TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
C+++ V++++ D V + EM K G+ PD
Sbjct: 707 CRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 164/359 (45%), Gaps = 17/359 (4%)
Query: 147 SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL-------VNEKTYGILLNRYA 199
+R S F A++ A R E ++ F M D V + +L++R
Sbjct: 135 ARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDR-- 192
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAETFFESEKNEFGYDIK 258
++ A+ +++R G L + + + L+ LC R V+ + F E + D+K
Sbjct: 193 --GVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVK 250
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
++L+ C G + +A R + ++ C PD VTY F++ L K G++ A F+ +
Sbjct: 251 IYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELL 310
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
+ G ++ +C+ID L R E L EM + P++T Y LI+ + R
Sbjct: 311 QDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRT 370
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN 435
+ + LDEM+ K +P+ +N LLK+L + ++ M +N + + T+N
Sbjct: 371 KDAFLLLDEMKDKG--FVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHN 428
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+++ DK ++EM + G P +Y +I GLY G LE+A FH+M +
Sbjct: 429 IMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEM 487
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 188/422 (44%), Gaps = 67/422 (15%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
++G ++ G ++ ++D L +A RF E + + EM PD+ Y IL+ R+A A
Sbjct: 311 QDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDIT---LYTILIRRFAEA 367
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTM 260
++A + D K+ G + D + LL L +++ A++ E +N D T
Sbjct: 368 GRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTH 427
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
NI++ G C G + +A + + ++ + C P +TY ++ L + G L A LF M E
Sbjct: 428 NIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM-E 486
Query: 321 KGRKP--------------DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
G P D + ++D +C ++ +A ++LR + G +P+V TYN
Sbjct: 487 MGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYN 546
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERME 423
+LI LCK K ++ E++ K S P+EIT+ L+ L + + + + +
Sbjct: 547 TLINGLCKAKNLDGALRLFKELQLKGIS--PDEITYGTLIDGLWRAHRENDATMLFQNIL 604
Query: 424 RNGCKMSTDTYNVILKLYV--------------------NWDCEDKV----RHTWE---- 455
R+G S YN +++ N ED+V R +E
Sbjct: 605 RSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFL 664
Query: 456 -EMEKKGMGPDQ-------RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR-TGIL 506
E K+ + DQ YT+ + GL +++DAL FH + G+V P +L
Sbjct: 665 DETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALL 724
Query: 507 VN 508
+N
Sbjct: 725 IN 726
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 164/383 (42%), Gaps = 33/383 (8%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P S + ++D L + V+ +++FDEM PD+ K Y +LL+ +E+A
Sbjct: 212 PNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDV---KIYTVLLSSLCNEGRIEDA 268
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNG 266
+ KE G D + L LC+ V+ A FE + F + + +++G
Sbjct: 269 GRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDG 328
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
G E ++ +++ PD Y + + G+ A L M +KG PD
Sbjct: 329 LFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPD 388
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
N ++ AL I A ++ EM + + TT+N +I LCK ++ + D
Sbjct: 389 TFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFD 448
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERN-----------GCKMSTD 432
EM + C P +T+N L+ L + EE + +ME G D
Sbjct: 449 EMGEHG--CHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRD 506
Query: 433 TYNVILKLYVNWDCED----KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
T + L+ V+ C+ K + + G+ PD +Y +I+GL L+ AL
Sbjct: 507 TES--LRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRL 564
Query: 489 FHEMRLKGMVPEPRT-GILVNDM 510
F E++LKG+ P+ T G L++ +
Sbjct: 565 FKELQLKGISPDEITYGTLIDGL 587
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 5/212 (2%)
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
S + V A + G+ A+ F M + +P N + L + I AL +
Sbjct: 144 SAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYN 203
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-- 409
M + GCLPN TTY L+ LCK + DEM ++ +P+ + LL SL
Sbjct: 204 RMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERG--IVPDVKIYTVLLSSLCN 261
Query: 410 -KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
+ E+ +L M+ NGC TY V L D+ H +E ++ G
Sbjct: 262 EGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIG 321
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
Y+ +I GL+ GR ++ LSY+ EM K + P+
Sbjct: 322 YSCLIDGLFQAGRFDEGLSYYTEMLGKSISPD 353
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 8/166 (4%)
Query: 344 PEAL---EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
P+A+ + L + + G + +L+ R + E M + C P
Sbjct: 123 PDAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFD--CRPTAF 180
Query: 401 TFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
+N + + L + L RM +GC ++ TY V++ ++EM
Sbjct: 181 VYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEM 240
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++G+ PD + YTV++ L ++GR+EDA M+ G P+ T
Sbjct: 241 LERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVT 286
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 26/250 (10%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY + + G P +N +++ L +A+ +++F E+ PD E TYG
Sbjct: 526 AYKLLRGIIESG-VVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPD---EITYG 581
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
L++ AH +A +F G L + ++ LCR K + A +
Sbjct: 582 TLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLW------ 635
Query: 253 FGYDIKTMNIILNGWCVLGNVYEA--KRFWKDIIKSKCEPDSV-------TYATFVNALT 303
Y K N+ V+ N + F + +K + D V Y +V L
Sbjct: 636 LDYLPKKYNLSPEDE-VIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLC 694
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
+ K+ ALR+F + E G C +I+ LC+ + + A++++ ++ + +
Sbjct: 695 QVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQP 754
Query: 364 TYNSLIKHLC 373
N L++ LC
Sbjct: 755 VGNRLLRSLC 764
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 132/257 (51%), Gaps = 7/257 (2%)
Query: 252 EFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ GY D T+N ++ G C+ G V + F ++ + + V+Y T +N L K G+
Sbjct: 128 KLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETR 187
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A++L + + ++ +PDVV + IID LC K + +A + EM RG PNV TY++LI
Sbjct: 188 CAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLI 247
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
C ++ + L+EM KN + PN T+N L+ +L K +E +L M G
Sbjct: 248 WGFCLAGQLMGAFSLLNEMILKNIN--PNVYTYNILIDALCKEGKVKEAKKLLAEMHHKG 305
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
TYN +L DK + +M+K G+ P++ +YT +I GL GRL++A
Sbjct: 306 QPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQ 365
Query: 487 SYFHEMRLKGMVPEPRT 503
F + +KG + RT
Sbjct: 366 KLFQHLLVKGCCIDVRT 382
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 149/352 (42%), Gaps = 40/352 (11%)
Query: 152 YSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAI 208
Y P + N ++ L G +R + +N+ +YG LLN A+
Sbjct: 131 YQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAV 190
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNG 266
+ ++ D+ + ++ LC+ K V A FF SE N G ++ T + ++ G
Sbjct: 191 KLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFF-SEMNARGIFPNVITYSTLIWG 249
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C+ G + A ++I P+ TY ++AL K+GK+ A +L M KG+ D
Sbjct: 250 FCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPAD 309
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT N ++D LC + + +A + +MK G PN TY +LI LCK R++ +
Sbjct: 310 VVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKL-- 367
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
F +LL GC + TYNV++
Sbjct: 368 ---------------FQHLL-----------------VKGCCIDVRTYNVMISGLCKEGM 395
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
DK +ME G P+ ++ ++I L++K + A H M KG++
Sbjct: 396 FDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 21/233 (9%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY FF ++ G + P ++ ++ A + + + +EM P N TY
Sbjct: 224 AYDFFSEMNARGIF-PNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINP---NVYTYN 279
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-- 250
IL++ V+EA + G+ D+ + ++L LC+ ++++ A F K
Sbjct: 280 ILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKW 339
Query: 251 ----NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
N++ Y +++G C G + A++ ++ ++ C D TY ++ L K+G
Sbjct: 340 GIQPNKYTY-----TALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEG 394
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
AL + M + G P+ VT + II +L K +A ++L M +G L
Sbjct: 395 MFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 193/451 (42%), Gaps = 48/451 (10%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
+LT L+ ++ N D A FF+W+ R ++ +++L +L R R V
Sbjct: 50 SLTPSLLCSLFN-LNPDPLTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENV 108
Query: 179 FDEM-PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
+ M + LLN + A D + + L+++ LL+ L R+
Sbjct: 109 RNSMIKSCTSPHDATFLLN---LLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFS 165
Query: 238 HVEVAETFFE----SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD-- 291
V+ + ++ N ++ T+N +LN +C LGN+ A+ F+ I++ + PD
Sbjct: 166 MVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLF 225
Query: 292 -----------------------------SVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+V+Y ++ L + GKL AL + M E G
Sbjct: 226 TYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDG 285
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P V T ++ ALC R EAL + EM+ RGC PNV TY LI +LCK RM+
Sbjct: 286 CFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEAL 345
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILK 439
+ L+EM +K + P+ + FN L+ S K E+ VL ME + TYN ++
Sbjct: 346 KMLNEMVEKGVA--PSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELIC 403
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ D+ +M + + PD +Y +IHGL + G ++ A F M G P
Sbjct: 404 GFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSP 463
Query: 500 EPRTGILVNDMNIKLKERGEQGKKVIKLTSL 530
+ T N + L G G+ L SL
Sbjct: 464 DQWT---FNAFMVCLCRMGRVGEAHQILESL 491
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 158/345 (45%), Gaps = 9/345 (2%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMV 204
RE P + ++ L + R +E + +F EM + N TY +L++ +
Sbjct: 282 REDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRM 341
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNII 263
+EA+ + + E G + F L+ C+ +E A E + +++T N +
Sbjct: 342 DEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNEL 401
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G+C ++ A +++SK PD VTY T ++ L + G + +A RLF+ M G
Sbjct: 402 ICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGF 461
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD T N + LC R+ EA ++L +K + N Y +LI CK ++E
Sbjct: 462 SPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAAS 521
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKL 440
M + CLPN ITFN ++ L+K +V ++E M + K + TYN++++
Sbjct: 522 LFKRMLAE--ECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEE 579
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
+ D+ + G P+ +YT I +GRLE+A
Sbjct: 580 VLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEA 624
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 156/369 (42%), Gaps = 54/369 (14%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVF---DRRKEFGELDD 222
+ AR F I + PDL TY L+ Y VE A GVF RR
Sbjct: 205 MAVARLFFVRILRCEPGPDLF---TYTSLVLGYCRNDDVERACGVFCVMPRRNAV----- 256
Query: 223 LSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD-IKTMNIILNGWCVLGNVYEAKRFWK 281
++ NL+ LC + A F+ + + + ++T +++ C G EA +
Sbjct: 257 --SYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFG 314
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
++ + CEP+ TY ++ L K+G++ AL++ M EKG P VV N +I + C +
Sbjct: 315 EMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRG 374
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ +A+ VL M+++ PNV TYN LI C+ K M+ L++M + S P+ +T
Sbjct: 375 MMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLS--PDVVT 432
Query: 402 FNYLLKSL--------------------------------------KKPEEVPWVLERME 423
+N L+ L + E +LE ++
Sbjct: 433 YNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLK 492
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
K + Y ++ Y + ++ M + P+ ++ VMI GL +G+++
Sbjct: 493 EKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQ 552
Query: 484 DALSYFHEM 492
DA+ +M
Sbjct: 553 DAMLLVEDM 561
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 180/429 (41%), Gaps = 73/429 (17%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N ++ R + + + ++M PD+V TY L++ +V+ A
Sbjct: 393 PNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVV---TYNTLIHGLCEVGVVDSA 449
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK------NEFGYDIKTMN 261
+F G D F ++ LCR V A ES K NE Y
Sbjct: 450 SRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAY-----T 504
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE- 320
+++G+C G + A +K ++ +C P+S+T+ ++ L K+GK+ A+ L + M +
Sbjct: 505 ALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKF 564
Query: 321 ----------------------------------KGRKPDVVTCNCIIDALCFKKRIPEA 346
G +P+VVT I A C + R+ EA
Sbjct: 565 DVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEA 624
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
E++ ++KN G L + YN LI + +++ + L M C P+ +T++ L+
Sbjct: 625 EEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRM--FGTGCEPSYLTYSILM 682
Query: 407 KSLKKPEEVPWVLERMERNGCK---MSTDTYNVILKLYVNWDCEDKVRHT--WEEMEKKG 461
K L V+E+ ++ G + N+ + W D T +E+M + G
Sbjct: 683 KHL--------VIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECG 734
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQG 521
P+ +Y+ +I+GL GRL A S +H MR G+ P + I+ N + + G G
Sbjct: 735 CVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISP---SEIIHNSLLSSCCKLGMFG 791
Query: 522 KKVIKLTSL 530
+ V L S+
Sbjct: 792 EAVTLLDSM 800
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 139/332 (41%), Gaps = 36/332 (10%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFD 180
L+ V+ Y FD A + +S Y P + A + GR E++
Sbjct: 576 LVEEVLKEYDFD-RANEILNRLIS--SGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIK 632
Query: 181 EMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
L++ Y +L+N Y +++ A GV R+ FG + S +L KH+
Sbjct: 633 NEGVLLDSFIYNLLINAYGCMGLLDSAFGVL--RRMFGTGCEPSYLTYSILM----KHL- 685
Query: 241 VAETFFESEKNEFGYDIKTMNIILNG---WCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
V E + N G D+ NI ++ W + F K + + C P+ TY+
Sbjct: 686 VIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEK-MAECGCVPNLNTYSK 744
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+N L K G+L A L+ M E G P + N ++ + C EA+ +L M
Sbjct: 745 LINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECS 804
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY-------LLKSLK 410
L ++ +Y LI L +E +++ + + C +NY L+ L
Sbjct: 805 HLAHLESYKLLICGL---------FEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLA 855
Query: 411 KP---EEVPWVLERMERNGCKMSTDTYNVILK 439
K ++ +L ME+NGC++ +TY+++++
Sbjct: 856 KTGYVDQCSELLNLMEKNGCRLHPETYSMLMQ 887
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 3/165 (1%)
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGW 267
+F++ E G + +L+ + L+ LC+ + VA + + + E G + N +L+
Sbjct: 726 LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMR-EGGISPSEIIHNSLLSSC 784
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C LG EA +++ +Y + L ++ A +F ++ G D
Sbjct: 785 CKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDE 844
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
V +ID L + + E+L M+ GC + TY+ L++ L
Sbjct: 845 VAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQEL 889
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 160/342 (46%), Gaps = 6/342 (1%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+G R V+L+++ ++ N Y +++ +V EA ++ G D
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187
Query: 226 FQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ C + A + E + NI++N C GNV EAK +
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K +P VTY+T ++ G++ A ++F AM + G P+V + N +I+ LC KR+
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA+ +LREM ++ +P+ TYNSLI LCK R+ + ++EM + + +T+
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQP--ADVVTYTS 365
Query: 405 LLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
LL +L K + + + +M+ G + + TY ++ + ++ + KG
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 425
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D +YTVMI GL +G ++AL+ +M G +P T
Sbjct: 426 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVT 467
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 132/257 (51%), Gaps = 7/257 (2%)
Query: 252 EFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ GY D T+N ++ G C+ G V ++ F ++ + D V+Y T +N L K G+
Sbjct: 73 KLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETR 132
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A++L + + ++ +P+VV N IID LC K + EA ++ EM RG P+ TY +LI
Sbjct: 133 CAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLI 192
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
C + ++ + LDEM KN + P +N L+ +L K +E +L M + G
Sbjct: 193 YGFCLLGQLMGAFSLLDEMILKNIN--PGVYIYNILINALCKEGNVKEAKNLLAVMTKEG 250
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
K TY+ ++ Y + + M + G+ P+ SY +MI+GL R+++A+
Sbjct: 251 IKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAM 310
Query: 487 SYFHEMRLKGMVPEPRT 503
+ EM K MVP+ T
Sbjct: 311 NLLREMLHKNMVPDTVT 327
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 13/217 (5%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P + + + +L K + TA+ L + M KG + + VT N +I+ C ++ + V
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
L ++ G P+ T N+L+K LC ++ + D++ + + +++ LL L
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQ--MDHVSYGTLLNGL 125
Query: 410 KKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH----TWEEMEKKGM 462
K E +L +E + + YN I ++ C+DK+ + + EM+ +G+
Sbjct: 126 CKIGETRCAVKLLRMIEDRSTRPNVVMYNTI----IDGLCKDKLVNEAYDLYSEMDARGI 181
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
PD +YT +I+G G+L A S EM LK + P
Sbjct: 182 FPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINP 218
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P +N +++ L + +R E + + EM PD V TY L++ + +
Sbjct: 287 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV---TYNSLIDGLCKSGRITS 343
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIIL 264
A+ + + G+ D+ + +LL LC+ ++++ A F K E G + T ++
Sbjct: 344 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK-ERGIQPTMYTYTALI 402
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G C G + A+ ++ ++ C D TY ++ L K+G AL + M + G
Sbjct: 403 DGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCI 462
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
P+ VT II +L K +A ++L EM +G L
Sbjct: 463 PNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 178/386 (46%), Gaps = 13/386 (3%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
L + I+N R + +A + + + R PGSN FN +L +L ++ F + +V
Sbjct: 82 VLIHEAIINAHVRSQLPEQALFYXNQMIGR--GLVPGSNTFNNLLILLIKSNFFEKAWRV 139
Query: 179 FDEMPDLVNEKTY--GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
F+E V Y GI++ +++ V + +E G ++ + L+ C+
Sbjct: 140 FNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 199
Query: 237 KHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
+E + F++ + + + T +++NG+ +G + ++ + + P+ TY
Sbjct: 200 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 259
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+ + GKL A LF M E+G +VVT N +I LC ++R+ EA ++ MK
Sbjct: 260 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 319
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKP 412
G PN+ +YN+LI C I ++ ++M+ S P+ T+N L+ K
Sbjct: 320 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQS--PSLATYNILIAGFSEAKNS 377
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
V ++ ME G S TY +++ V D +K + MEK G+ D Y V+
Sbjct: 378 AGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVL 437
Query: 473 IHGLYDKGRLEDALSYFH---EMRLK 495
IHGL G +++A F EM LK
Sbjct: 438 IHGLCVVGDMKEASKLFKSLDEMHLK 463
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 152/344 (44%), Gaps = 12/344 (3%)
Query: 172 FVELIQV-FDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
F EL Q D P L++E ++N + + + E+A+ ++ G + + F N
Sbjct: 67 FHELTQPHLDSFPTHVLIHEA----IINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNN 122
Query: 229 LLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
LL+ L + E A F K D+ + I++ G C +G + + + +
Sbjct: 123 LLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGL 182
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
P+ V Y T ++ K G + +LF M E + T +I+ + +E
Sbjct: 183 SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIE 242
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ +MK G +PNV TYNS+I C ++ +E DEM ++ +C N +T+N L+
Sbjct: 243 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC--NVVTYNTLIGG 300
Query: 409 L---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L ++ E ++ RM+R+G + +YN ++ Y + DK + +M+ G P
Sbjct: 301 LCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPS 360
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
+Y ++I G + EM +G+ P T ++ D
Sbjct: 361 LATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMD 404
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 19/234 (8%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R+G SP +N ++D + +F++M P L TY IL+ ++ A
Sbjct: 319 RDG-LSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLA---TYNILIAGFSEA 374
Query: 202 HMVEEAIGVFDRRKEFGELDDLS----AFQNLLLWLCRYKHVEVAETFFES-EKNEFGYD 256
+ + GV D +E E LS + L+ L R ++E A + S EK D
Sbjct: 375 ---KNSAGVTDMVREM-EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVAD 430
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
I ++++G CV+G++ EA + +K + + +P+ V Y T + K+G ALRL +
Sbjct: 431 IYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLK 490
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
M E G P+V + N I LC ++ EA +L++M G P+++ +N + K
Sbjct: 491 EMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISK 544
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 10/223 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N ++ L + RR +E ++ M P+L+ +Y L++ Y + +++A +F+
Sbjct: 294 YNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLI---SYNTLIDGYCSIGNLDKASSLFN 350
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
+ K G+ L+ + L+ K+ V + E E T I+++
Sbjct: 351 QMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSD 410
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
N+ +A + + + K+ D Y ++ L G + A +LF+++ E KP+ V N
Sbjct: 411 NIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYN 470
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+I C + AL +L+EM G +PNV +YNS I LCK
Sbjct: 471 TMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCK 513
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
+ + A + F + G SP +N ++ A+ + + EM P V
Sbjct: 341 NLDKASSLFNQMKSSGQ-SPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKV-- 397
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY IL++ + +E+A ++ ++ G + D+ + L+ LC ++ A F+S
Sbjct: 398 -TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKS 456
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
++ + N ++ G+C G+ Y A R K++ ++ P+ +Y + + L K K
Sbjct: 457 LDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEK 516
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
A L + M E G KP + N I A
Sbjct: 517 WTEAEVLLKDMIELGLKPSISIWNMISKA 545
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 148/301 (49%), Gaps = 6/301 (1%)
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILN 265
AI +F + G ++ L+ C H+ A + + K F ++ T N ++N
Sbjct: 74 AISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLIN 133
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C+ G V +A F D++ D +Y + +N L K G+ AL+L Q M E +P
Sbjct: 134 GFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRP 193
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+++T + +ID LC + I +AL + + +RG L +V YNSLI C + + L
Sbjct: 194 NLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLL 253
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYV 442
M + N + P++ TFN L+ +L K E V M + G K TYN +++ +
Sbjct: 254 TMMVRGNIN--PDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFC 311
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ + R + M K+G+ PD +Y V+I+G +++A+ F E+R K +VP
Sbjct: 312 LSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLA 371
Query: 503 T 503
T
Sbjct: 372 T 372
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 160/342 (46%), Gaps = 9/342 (2%)
Query: 167 GRARRFVELIQVFDEMPDLV--NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
G+ R ++L+Q +E DLV N TY +++ ++ +A+ +F G L D+
Sbjct: 174 GQTRDALQLLQKMEE--DLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVV 231
Query: 225 AFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
A+ +L+ C E + D T NI+++ C G + EA+ + +
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVM 291
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+K +PD VTY + + A LF M ++G +PDV+ N +I+ C +
Sbjct: 292 MKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMV 351
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
EA+ + +E++ + +PN+ TYNSLI LCK+ RM V E +DEM + S P+ +T+N
Sbjct: 352 DEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQS--PDIVTYN 409
Query: 404 YLLKSL--KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L + KP E L R G Y+VI++ + + + + G
Sbjct: 410 IFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHG 469
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
P+ R+YT+MI+ L ++A++ +M P+ T
Sbjct: 470 CCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVT 511
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 7/284 (2%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETF 245
++ T+ IL++ + EA GVF + GE D+ + L+ C +V E E F
Sbjct: 264 DDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELF 323
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
K D+ N+++NG+C + V EA +K+I P+ TY + ++ L K
Sbjct: 324 NRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKL 383
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G++ L M ++G+ PD+VT N +DA C K +A+ + R++ +G P+ Y
Sbjct: 384 GRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYMY 442
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERM 422
+ ++++ CK ++++ E L + C PN T+ ++ +L K +E +L +M
Sbjct: 443 DVIVENFCKGEKLKIAEEALQHLLIH--GCCPNVRTYTIMINALCKDCSFDEAMTLLSKM 500
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
+ N C T+ I+ + DK EM ++G+ D+
Sbjct: 501 DDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDE 544
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 132/286 (46%), Gaps = 14/286 (4%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
W A + R G+ +P FN ++D L + R VE VF M PD+V
Sbjct: 246 WREATRLLTMMVR-GNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIV--- 301
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ES 248
TY L+ + ++ V EA +F+R + G D+ + L+ C+ V+ A F E
Sbjct: 302 TYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEI 361
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
++ T N +++G C LG + + ++ PD VTY F++A K
Sbjct: 362 RCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPY 421
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A+ LF+ + + G PD + I++ C +++ A E L+ + GC PNV TY +
Sbjct: 422 EKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIM 480
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
I LCK + L +M+ + C P+ +TF ++ +L++ E
Sbjct: 481 INALCKDCSFDEAMTLLSKMDDND--CPPDAVTFETIIGALQERNE 524
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 106/240 (44%), Gaps = 16/240 (6%)
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
+ +++ P + + A+ + G TA+ LF + KG P + T +I+ C
Sbjct: 43 FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY-LDEMEQKNGSCLPN 398
+ + A +L + G PN+ T+N+LI C + + LD M + G L +
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAK--GYPL-D 159
Query: 399 EITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV----R 451
E ++ L+ L K + +L++ME + + + TY+ + ++ C+D++
Sbjct: 160 EFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTV----IDGLCKDRLIADAL 215
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
+ + +G+ D +Y +IHG G+ +A M + P+ T ILV+ +
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 103/260 (39%), Gaps = 45/260 (17%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F + + G+ P +NA+++ + E ++F+ M PD++N Y
Sbjct: 284 AQGVFAVMMKRGE-KPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLN---YN 339
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKN 251
+L+N Y MV+EA+ +F + + +L+ + +L+ LC+ + V E E
Sbjct: 340 VLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDR 399
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS------------------------- 286
DI T NI L+ +C +A ++ I++
Sbjct: 400 GQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAE 459
Query: 287 ---------KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
C P+ TY +NAL K A+ L M + PD VT II AL
Sbjct: 460 EALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGAL 519
Query: 338 CFKKRIPEALEVLREMKNRG 357
+ +A ++ EM RG
Sbjct: 520 QERNETDKAEKLRLEMIERG 539
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 157/318 (49%), Gaps = 4/318 (1%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
N +Y ++ A+ EA+ + + G D+ + L+ LC ++ A E
Sbjct: 122 NAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELL 181
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E + ++ + +L G+C G + + ++D+ + +PD + + ++ L K+
Sbjct: 182 DEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKE 241
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK G A ++ M ++G +P+VVT N +I++LC + + EAL + +EM ++G P+V TY
Sbjct: 242 GKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTY 301
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERM 422
N+LI L + M+ +L+EM Q + P+ +TFN ++ L K + V E M
Sbjct: 302 NTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMM 361
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
GC + TYN ++ ++ + +E+ G+ PD +Y+++I+G +
Sbjct: 362 AERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEV 421
Query: 483 EDALSYFHEMRLKGMVPE 500
+ A + MR +G+ E
Sbjct: 422 DRAEKFLCTMRQRGIKAE 439
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%)
Query: 256 DIKTMNIILNGWCVLG--NVYEAKRFWKDIIK---SKCEPDSVTYATFVNALTKKGKLGT 310
D + N +L C G ++ +A+ D+ + P++V+Y T + L + G
Sbjct: 82 DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A+ L ++M G + DVVT +I LC + ALE+L EM G PNV Y+ L++
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGC 427
C+ R + V + ++M ++ P+ I F L+ L K + V + M + G
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRG--IKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGL 259
Query: 428 KMSTDTYNVILKLYVNWDC-EDKVRHTW---EEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+ + TYNV+ +N C E VR +EM+ KG+ PD +Y +I GL ++
Sbjct: 260 EPNVVTYNVL----INSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMD 315
Query: 484 DALSYFHEMRLKGMVPEP 501
+A+S+ EM V EP
Sbjct: 316 EAMSFLEEMIQGDTVVEP 333
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 163/379 (43%), Gaps = 19/379 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
W+ F+ +SR G P +F ++D L + + + +V D M P++V
Sbjct: 209 WQDVGKVFEDMSRRG-IKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVV--- 264
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-- 247
TY +L+N V EA+ + + G D+ + L+ L ++ A +F E
Sbjct: 265 TYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEM 324
Query: 248 -SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
D+ T N +++G C +G + +A + + + + C + VTY + +
Sbjct: 325 IQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVH 384
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
K+ A+ L + G +PD T + +I+ + A + L M+ RG + Y
Sbjct: 385 KVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYI 444
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLERME 423
L+ +C+ ME +EM++ +C + I ++ ++ K + V +++ M
Sbjct: 445 PLLAAMCQQGMMERAMGLFNEMDK---NCGLDAIAYSTMIHGACKSGDMKTVKQLIQDML 501
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G TY++++ +Y ++ ++M G PD + +I G +G+ +
Sbjct: 502 DEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTD 561
Query: 484 DALSYFHEMRLKGMVPEPR 502
L HEMR K + +P+
Sbjct: 562 KVLKLIHEMRAKNVAFDPK 580
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 134/292 (45%), Gaps = 15/292 (5%)
Query: 134 FDWEAAYTFFKWVSREGD--YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNE 188
+ + A +F + + +GD P FN+++ L + R + ++V + M + + N
Sbjct: 312 LEMDEAMSFLEEMI-QGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNL 370
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY L+ + H V+ A+ + D G D + L+ + V+ AE F +
Sbjct: 371 VTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCT 430
Query: 249 EKNEFGYDIKTMNII--LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ G + + I L C G + A + ++ K+ C D++ Y+T ++ K G
Sbjct: 431 MRQR-GIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKN-CGLDAIAYSTMIHGACKSG 488
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ T +L Q M ++G PD VT + +I+ + EA VL++M G +P+V ++
Sbjct: 489 DMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFD 548
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV 418
SLIK + + V + + EM KN + P I+ ++ P++ P +
Sbjct: 549 SLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIIS-----TIIRLPQQTPLL 595
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 177/372 (47%), Gaps = 9/372 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILL 195
A FK + RE P ++ ++D L G ++ +L+++ ++ + Y I++
Sbjct: 161 AVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVI 220
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFG 254
+ + M++ A + + K+ D+ + +L+ L + E T F E
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIY 280
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ T N +++G C G V +A+ +I+ EP+ +TY ++ +G++G A R+
Sbjct: 281 PDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRI 340
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F +M +KG +PD+++ +I+ KK++ +A+++ RE+ G P++ T + L++ L +
Sbjct: 341 FDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFE 400
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMST 431
+ R E + DEM+ +PN T LL K EE ++ER +
Sbjct: 401 VGRTECAKIFFDEMQAAGH--IPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNI 458
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
Y ++ DK T+E++ G+ PD +YT MI G +G L++A +
Sbjct: 459 QIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRK 518
Query: 492 MRLKGMVPEPRT 503
M G +P+ RT
Sbjct: 519 MEDNGCLPDNRT 530
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 24/260 (9%)
Query: 149 EGDYSPGSNVFNAILD------VLGRARRFVELIQVFDEM------PDLVNEKTYGILLN 196
E P +N ++D +GRARR +FD M PD++ +Y L+N
Sbjct: 311 EKGVEPNEITYNVVMDGYCLRGQMGRARR------IFDSMIDKGIEPDII---SYTALIN 361
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY- 255
Y +++A+ +F + G + LL L E A+ FF+ E G+
Sbjct: 362 GYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFD-EMQAAGHI 420
Query: 256 -DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T +L G+ G V EA + + + + + + Y +N L K GKL A
Sbjct: 421 PNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHAT 480
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F+ + G PDV+T +I C + + EA ++LR+M++ GCLP+ TYN +++ +
Sbjct: 481 FEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFR 540
Query: 375 IKRMETVYEYLDEMEQKNGS 394
++ + +L E+ K+ S
Sbjct: 541 SSKVSEMKAFLKEIAGKSFS 560
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 116/292 (39%), Gaps = 72/292 (24%)
Query: 280 WKDIIKSKCEPDSVTYATFVNALT----------------KKG----------------- 306
+++I K + D+ +T VN+ KKG
Sbjct: 95 FREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFA 154
Query: 307 --KLGTALRLFQAMW-EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K+ A+ LF+ + E +PD V ++D LC K +A ++LR M+ P+
Sbjct: 155 ENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTC 214
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNG------------------------------ 393
YN +I CK ++ L+EM+QKN
Sbjct: 215 IYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEM 274
Query: 394 ---SCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ P+ TFN ++ L K E+ ++ M G + + TYNV++ Y
Sbjct: 275 IHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQM 334
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ R ++ M KG+ PD SYT +I+G +K +++ A+ F E+ G+ P
Sbjct: 335 GRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKP 386
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 20/223 (8%)
Query: 295 YATFVNALTKKGKLGT------------ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
Y+T +++ KG G A LF+ M P V+ + ++ AL K
Sbjct: 28 YSTNTCSISVKGNFGVSNEFENVKCLDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKH 87
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP-NEIT 401
+ + RE+ + ++++ C + R + + L + K G +P NE+T
Sbjct: 88 YSSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVL-AIHFKKG--IPYNEVT 144
Query: 402 FNYLLKSL---KKPEEVPWVLERMER-NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
F L++ L K ++ + +++ R N C+ Y ++ K M
Sbjct: 145 FTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLM 204
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
E+ PD Y ++I G L+ A S +EM+ K + P+
Sbjct: 205 EQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPD 247
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 13/219 (5%)
Query: 128 VINRY--RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GR---ARRFVELIQVF 179
+IN Y + + A F+ +S+ G P + +L L GR A+ F + +Q
Sbjct: 359 LINGYVEKKKMDKAMQLFREISQNG-LKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAA 417
Query: 180 DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV 239
+P+L T+ LL Y +VEEA+ F + + E ++ + ++ LC+ +
Sbjct: 418 GHIPNLY---THCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKL 474
Query: 240 EVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
+ A FE D+ T +++G+C G + EAK + + + C PD+ TY
Sbjct: 475 DKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVI 534
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
V + K+ + + K + T ++D +
Sbjct: 535 VRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDII 573
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 177/381 (46%), Gaps = 17/381 (4%)
Query: 133 RFDWEAAYTFFKWVSREG--DYSPGSNVFNAILDVLGRARR----FVELIQVFDEMPDLV 186
R AA + + ++R G +P + + ++ RA R F L V + V
Sbjct: 67 RHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKK-GFRV 125
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
+ T+ LL A +A+ + RR E G + D+ ++ NLL LC + A
Sbjct: 126 DAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALEL 185
Query: 246 FESEKNEFG----YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
++ G D+ + N +LNG+ G+ +A + +++ PD VTY++ + A
Sbjct: 186 LHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAA 245
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K + A+ + M + G PD +T N I+ C + EA+ L++M++ G PN
Sbjct: 246 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 305
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWV 418
V TY+SL+ +LCK R + D M ++ P+ T+ LL+ E+ +
Sbjct: 306 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE--PDIATYRTLLQGYATKGALVEMHAL 363
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L+ M RNG + +N+++ Y + D+ + +M + G+ P+ Y +I L
Sbjct: 364 LDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 423
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
G ++DA+ YF +M +G+ P
Sbjct: 424 SGSVDDAMLYFEQMIDEGLTP 444
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 171/375 (45%), Gaps = 16/375 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D + AY+ + + G P +++I+ L +A+ + ++V + M PD +
Sbjct: 216 DSDKAYSTYHEMLDRG-ILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM-- 272
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY +L+ Y ++ +EAIG + + G ++ + +L+ +LC+ A F+S
Sbjct: 273 -TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS 331
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
K DI T +L G+ G + E ++++ +PD + + A K+ K
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEK 391
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A+ +F M + G P+VV +ID LC + +A+ +M + G PN+ Y S
Sbjct: 392 VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 451
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMER 424
LI LC + + E + EM + G CL N I FN ++ S K V + + M R
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDR-GICL-NTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G K TYN ++ D+ M G+ PD +Y +I+G R++D
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 569
Query: 485 ALSYFHEMRLKGMVP 499
AL+ F EM G+ P
Sbjct: 570 ALALFKEMVSSGVSP 584
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 188/392 (47%), Gaps = 23/392 (5%)
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGI 193
+ + R G P +VFN ++ + + + + VF +M P++V YG
Sbjct: 361 HALLDLMVRNG-IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVV---CYGT 416
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
+++ + V++A+ F++ + G ++ + +L+ LC + AE E +
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI-LEMLDR 475
Query: 254 GYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G + T+ N I++ C G V E+++ + +++ +PD +TY T ++ GK+ A
Sbjct: 476 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 535
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+L +M G KPD+VT +I+ C R+ +AL + +EM + G PN+ TYN +++
Sbjct: 536 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 595
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC---- 427
L +R E + K+G+ L T+N +L L K L RM +N C
Sbjct: 596 LFHTRRTAAAKELYVSI-TKSGTQLELS-TYNIILHGLCKNNLTDEAL-RMFQNLCLTDL 652
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
++ T T+N+++ + D+ + + G+ PD R+Y++M L ++G LE+
Sbjct: 653 QLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDD 712
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
F M G + R ++N + KL +RG+
Sbjct: 713 LFLSMEENGCSADSR---MLNSIVRKLLQRGD 741
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 148/339 (43%), Gaps = 19/339 (5%)
Query: 177 QVFDEMPDLV-NEKTYGILLNRY---AAAHMVEEAIGVFDRRKEFGE---LDDLSAFQNL 229
VFDE+ YG LNR A H A+ ++R G + + L
Sbjct: 41 HVFDELLRRGRGASIYG--LNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAIL 98
Query: 230 LLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF-WKDIIKSK 287
+ CR +++ K F D T +L G C +A + + +
Sbjct: 99 IGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELG 158
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK---GRKPDVVTCNCIIDALCFKKRIP 344
C PD +Y + L + + AL L M + G PDVV+ N +++ +
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSD 218
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A EM +RG LP+V TY+S+I LCK + M+ E L+ M KNG +P+ +T+N
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTM-VKNG-VMPDCMTYNS 276
Query: 405 LLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
+L S +P+E L++M +G + + TY+ ++ + R ++ M K+G
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ PD +Y ++ G KG L + + M G+ P+
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 26/328 (7%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILL 195
F + R G P +N ++D A + E ++ M PD+V TYG L+
Sbjct: 503 LFDLMVRIG-VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV---TYGTLI 558
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFG 254
N Y +++A+ +F G ++ + +L L + A+ + S K+
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 618
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T NIIL+G C EA R ++++ + + ++ T+ + AL K G++ A L
Sbjct: 619 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL 678
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F A G PDV T + + + L + + E ++ M+ GC + NS+++ L +
Sbjct: 679 FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQ 738
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTY 434
+ YL +++K+ S T ++LL E P V E++ R
Sbjct: 739 RGDITRAGTYLFMIDEKHFSL--EASTASFLL------ESSPIVWEQISR------ISHL 784
Query: 435 NVILKLYVNWDCEDKVRHTWEE-MEKKG 461
+V LKL C ++ W + + K G
Sbjct: 785 SVNLKLIKQPKCTCELGPKWSQNLPKPG 812
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 177/381 (46%), Gaps = 17/381 (4%)
Query: 133 RFDWEAAYTFFKWVSREG--DYSPGSNVFNAILDVLGRARR----FVELIQVFDEMPDLV 186
R AA + + ++R G +P + + ++ RA R F L V + V
Sbjct: 67 RHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKK-GFRV 125
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
+ T+ LL A +A+ + RR E G + D+ ++ NLL LC + A
Sbjct: 126 DAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALEL 185
Query: 246 FESEKNEFGY----DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
++ G D+ + N +LNG+ G+ +A + +++ PD VTY++ + A
Sbjct: 186 LHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAA 245
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K + A+ + M + G PD +T N I+ C + EA+ L++M++ G PN
Sbjct: 246 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 305
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWV 418
V TY+SL+ +LCK R + D M ++ P+ T+ LL+ E+ +
Sbjct: 306 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE--PDIATYRTLLQGYATKGALVEMHAL 363
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
L+ M RNG + +N+++ Y + D+ + +M + G+ P+ Y +I L
Sbjct: 364 LDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 423
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
G ++DA+ YF +M +G+ P
Sbjct: 424 SGSVDDAMLYFEQMIDEGLTP 444
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 171/375 (45%), Gaps = 16/375 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D + AY+ + + G P +++I+ L +A+ + ++V + M PD +
Sbjct: 216 DSDKAYSTYHEMLDRG-ILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM-- 272
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY +L+ Y ++ +EAIG + + G ++ + +L+ +LC+ A F+S
Sbjct: 273 -TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS 331
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
K DI T +L G+ G + E ++++ +PD + + A K+ K
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEK 391
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A+ +F M + G P+VV +ID LC + +A+ +M + G PN+ Y S
Sbjct: 392 VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 451
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMER 424
LI LC + + E + EM + G CL N I FN ++ S K V + + M R
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDR-GICL-NTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G K TYN ++ D+ M G+ PD +Y +I+G R++D
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 569
Query: 485 ALSYFHEMRLKGMVP 499
AL+ F EM G+ P
Sbjct: 570 ALALFKEMVSSGVSP 584
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 188/392 (47%), Gaps = 23/392 (5%)
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGI 193
+ + R G P +VFN ++ + + + + VF +M P++V YG
Sbjct: 361 HALLDLMVRNG-IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVV---CYGT 416
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
+++ + V++A+ F++ + G ++ + +L+ LC + AE E +
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI-LEMLDR 475
Query: 254 GYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G + T+ N I++ C G V E+++ + +++ +PD +TY T ++ GK+ A
Sbjct: 476 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 535
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+L +M G KPD+VT +I+ C R+ +AL + +EM + G PN+ TYN +++
Sbjct: 536 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 595
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC---- 427
L +R E + K+G+ L T+N +L L K L RM +N C
Sbjct: 596 LFHTRRTAAAKELYVSI-TKSGTQLELS-TYNIILHGLCKNNLTDEAL-RMFQNLCLTDL 652
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
++ T T+N+++ + D+ + + G+ PD R+Y++M L ++G LE+
Sbjct: 653 QLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDD 712
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
F M G + R ++N + KL +RG+
Sbjct: 713 LFLSMEENGCSADSR---MLNSIVRKLLQRGD 741
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 148/339 (43%), Gaps = 19/339 (5%)
Query: 177 QVFDEMPDLV-NEKTYGILLNRY---AAAHMVEEAIGVFDRRKEFGE---LDDLSAFQNL 229
VFDE+ YG LNR A H A+ ++R G + + L
Sbjct: 41 HVFDELLRRGRGASIYG--LNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAIL 98
Query: 230 LLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF-WKDIIKSK 287
+ CR +++ K F D T +L G C +A + + +
Sbjct: 99 IGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELG 158
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK---GRKPDVVTCNCIIDALCFKKRIP 344
C PD +Y + L + + AL L M + G PDVV+ N +++ +
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSD 218
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A EM +RG LP+V TY+S+I LCK + M+ E L+ M KNG +P+ +T+N
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTM-VKNG-VMPDCMTYNS 276
Query: 405 LLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
+L S +P+E L++M +G + + TY+ ++ + R ++ M K+G
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ PD +Y ++ G KG L + + M G+ P+
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 130/290 (44%), Gaps = 19/290 (6%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILL 195
F + R G P +N ++D A + E ++ M PD+V TYG L+
Sbjct: 503 LFDLMVRIG-VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV---TYGTLI 558
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFG 254
N Y +++A+ +F G ++ + +L L + A+ + S K+
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 618
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T NIIL+G C EA R ++++ + + ++ T+ + AL K G++ A L
Sbjct: 619 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL 678
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F A G PDV T + + + L + + E ++ M+ GC + NS+++ L +
Sbjct: 679 FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQ 738
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER 424
+ YL +++K+ S + T ++LL E P V E++ R
Sbjct: 739 RGDITRAGTYLFMIDEKHFSLEAS--TASFLL------ESSPIVWEQISR 780
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 184/456 (40%), Gaps = 92/456 (20%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM- 182
L+ ++ R+ EAA F + G +P ++FN++L LGRA + ++F M
Sbjct: 100 LLSKLVRRFSSPAEAA-GFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMR 158
Query: 183 -----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGE--LDDLSAFQNLLLWLC- 234
PD+V TYGILLN + V +A+ V DR G D++ ++ LC
Sbjct: 159 DASVKPDVV---TYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCK 215
Query: 235 -------------RYKHVE-----------VAETF-------------FESEKNEFGYDI 257
R +HV +A+ F EK ++
Sbjct: 216 IGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNV 275
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKD--IIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
TMN I+ G C +G V A F+++ + + ++VTY+T +A + A+ LF
Sbjct: 276 ITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELF 335
Query: 316 QAMWEKGRKPDVV-----------------TC------------------NCIIDALCFK 340
M + G +PD V C N +I C K
Sbjct: 336 HEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRK 395
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
K++ EA E+L EMK G P+V TYN+L+ LCK V E L M + C P+ +
Sbjct: 396 KKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHM--IDDGCQPSVV 453
Query: 401 TFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
TF L+ K +E + M+ + +T YN ++ D ++EM
Sbjct: 454 TFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEM 513
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
+K + + +Y ++ GL DK E A MR
Sbjct: 514 REKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMR 549
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 115/239 (48%), Gaps = 12/239 (5%)
Query: 176 IQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL 229
+++F EM PD V Y +++ A + +A K+ G D A+ L
Sbjct: 332 MELFHEMADHGHRPDAV---MYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNIL 388
Query: 230 LLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
+ CR K + A E K D+ T N +L+G C G+ +I C
Sbjct: 389 IGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGC 448
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
+P VT+ T V+ K GK ALR+F++M E +P+ V N +ID LC + + A++
Sbjct: 449 QPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIK 508
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+ EM+ + NVTTYN+L+K L K E +E +D M ++ C PN +T + L++
Sbjct: 509 LFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREER--CTPNYVTVDVLME 565
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 126/304 (41%), Gaps = 9/304 (2%)
Query: 206 EAIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNII 263
EA G D D+S F +LL L R ++ F S ++ D+ T I+
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGIL 172
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCE--PDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
LNG C G+V +A + + + PD T V+ L K G+L A+
Sbjct: 173 LNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRH 232
Query: 322 --GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
G P+ VT NC+ DA C I A +++ M+ G PNV T N++I LC++ R+
Sbjct: 233 VHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVG 292
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNV 436
E+ E N +T++ L + V +E M +G + Y
Sbjct: 293 AALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFT 352
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ T M+K G D ++Y ++I G K +L +A EM+ G
Sbjct: 353 MISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVG 412
Query: 497 MVPE 500
+ P+
Sbjct: 413 LQPD 416
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 121/260 (46%), Gaps = 5/260 (1%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
+ A F ++ G + P + ++ ++ L +A R ++ M ++ K Y I
Sbjct: 329 DMAMELFHEMADHG-HRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNI 387
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNE 252
L+ + + EA + + K G D+ + LL LC+ V E +
Sbjct: 388 LIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDG 447
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ T +++G+C G EA R ++ + +++ +P++V Y T ++ L K ++ A+
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAI 507
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+LF M EK +V T N ++ L KK +A E++ M+ C PN T + L++ L
Sbjct: 508 KLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWL 567
Query: 373 CKIKRMETVYEYLDEMEQKN 392
+I E + ++ + +QK+
Sbjct: 568 PEIGETERLKCFMQQRDQKD 587
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 195/434 (44%), Gaps = 25/434 (5%)
Query: 82 FQRYPGDEIAINVQN----ILKTCSVSTKGEIEKALNQCELT-LTDDLIV--NVINRY-R 133
F+ +P + NV + I C + E L EL T D+I VIN Y R
Sbjct: 657 FREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR 716
Query: 134 F-DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV 186
F + + + + + ++G P S + +I+ +L R + E + F EM PD +
Sbjct: 717 FGELDKVWKLIEKMKQKG-LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETF 245
Y L++ + + A F D+ + ++ C+ VE + F
Sbjct: 776 ---VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 832
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E DI T ++NG+C G++ +A R +I++ C P+ VTY T ++ L K+
Sbjct: 833 HEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 892
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G L +A L MW+ G +P++ T N I++ LC I EA++++ E + G + TY
Sbjct: 893 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 952
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
+L+ CK M+ E L EM K P +TFN L+ E+ +L M
Sbjct: 953 TTLMDAYCKSGEMDKAQEILTEMLGKG--LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1010
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G + T+N ++K Y + +++M +G+ PD ++Y ++ G + +
Sbjct: 1011 LAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNM 1070
Query: 483 EDALSYFHEMRLKG 496
++A F EM+ KG
Sbjct: 1071 KEAWFLFQEMKGKG 1084
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 158/345 (45%), Gaps = 12/345 (3%)
Query: 166 LGR---ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
LGR A + L+++ PD++ +Y ++N Y +++ + ++ K+ G +
Sbjct: 682 LGRINEAHHLLLLMELKGYTPDVI---SYSTVINGYCRFGELDKVWKLIEKMKQKGLKPN 738
Query: 223 LSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ +++ LCR K E E F E D +++G+C G++ A +F+
Sbjct: 739 SYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFY 798
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
++ PD +TY ++ + G + A +LF M +G +PD++T +++ C
Sbjct: 799 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAG 858
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
I +A V M GC PNV TY +LI LCK +++ E L EM + PN T
Sbjct: 859 HIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG--LQPNIFT 916
Query: 402 FNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
+N ++ L K EE ++ E G T TY ++ Y DK + EM
Sbjct: 917 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEML 976
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
KG+ P ++ V+++G G LED + M KG+ P T
Sbjct: 977 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 1021
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 185/444 (41%), Gaps = 30/444 (6%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYT-FFKW-VSREGDYSPGSNVFNAILDVL 166
I A+ +L + LI + R + + ++ FF V D+ VF+ VL
Sbjct: 549 IHLAVASKDLKVAQSLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVL 608
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILL-----NRYAA-----AHMVEEAIGVFDRRKE 216
E +VF++M + YG++L N Y A + AI VF E
Sbjct: 609 VEFGMLPEARKVFEKMLN------YGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPE 662
Query: 217 FGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
G +++++ ++ ++C+ + E E + D+ + + ++NG+C G E
Sbjct: 663 VGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFG---E 719
Query: 276 AKRFWKDIIKSK---CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+ WK I K K +P+S TY + + L + KL A F M +G PD +
Sbjct: 720 LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTT 779
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
++D C + I A + EM +R P+V TY ++I C+I M + EM +
Sbjct: 780 LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839
Query: 393 GSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
P+ ITF L+ K + V M + GC + TY ++ D
Sbjct: 840 LE--PDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 897
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
EM K G+ P+ +Y +++GL G +E+A+ E G+ + T + D
Sbjct: 898 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 957
Query: 510 MNIKLKERGEQGKKVIKLTSLGLK 533
K E + + + ++ GL+
Sbjct: 958 AYCKSGEMDKAQEILTEMLGKGLQ 981
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 165/385 (42%), Gaps = 56/385 (14%)
Query: 101 CSVSTKGEIEKALNQC--ELTLTDDLI-VNVINRY--RFDWEAAYTFFKWVSREGDYSPG 155
C + E E+A ++ + L D ++ +++ + R D AA FF + D +P
Sbjct: 750 CRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFF-YEMHSRDITPD 808
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIG 209
+ AI+ + VE ++F EM PD++ T+ L+N Y A +++A
Sbjct: 809 VLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDII---TFTELMNGYCKAGHIKDAFR 865
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
V + + G ++ + L+ LC+ ++ A E E K +I T N I+NG C
Sbjct: 866 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 925
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
GN+ EA + + + D+VTY T ++A K G++ A + M KG +P +V
Sbjct: 926 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIV 985
Query: 329 T-----------------------------------CNCIIDALCFKKRIPEALEVLREM 353
T NC++ C + + A + ++M
Sbjct: 986 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDM 1045
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---K 410
+RG P+ TY +L+K C + M+ + EM+ K S + T++ L+K K
Sbjct: 1046 CSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSV--SVSTYSVLIKGFFKRK 1103
Query: 411 KPEEVPWVLERMERNGCKMSTDTYN 435
K E + ++M R+G + ++
Sbjct: 1104 KFVEAREIFDQMRRDGLAADKEIFD 1128
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 175/466 (37%), Gaps = 58/466 (12%)
Query: 94 VQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS 153
V I + + ++L E D ++ V+ + + D+ FF W D +
Sbjct: 482 VHQITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSN 541
Query: 154 PGSNVFNAILDVLGRARRFVE-LIQVFDEMPDL---------------------VNEKTY 191
S L V + + + LI F E P L + + +
Sbjct: 542 LESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVF 601
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
+ M+ EA VF++ +G + + + L L + + E
Sbjct: 602 DVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFP 661
Query: 252 EFG--YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
E G +++ + NI+++ C LG + EA + PD ++Y+T +N + G+L
Sbjct: 662 EVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELD 721
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+L + M +KG KP+ T II LC ++ EA E EM +G LP+ Y +L+
Sbjct: 722 KVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLV 781
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKM 429
CK + ++ EM + +IT + L
Sbjct: 782 DGFCKRGDIRAASKFFYEMHSR-------DITPDVL------------------------ 810
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TY I+ + + + EM +G+ PD ++T +++G G ++DA
Sbjct: 811 ---TYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVH 867
Query: 490 HEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
+ M G P T + D K + + + ++ +GL+ N
Sbjct: 868 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 913
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 97/239 (40%), Gaps = 4/239 (1%)
Query: 154 PGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N+I++ L G V+L+ F+ + TY L++ Y + +++A +
Sbjct: 912 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 971
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCV 269
G + F L+ C + +E E + T N ++ +C+
Sbjct: 972 LTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCI 1031
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
N+ A +KD+ EPD TY V + A LFQ M KG V T
Sbjct: 1032 RNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVST 1091
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+ +I +K+ EA E+ +M+ G + ++ K KR +T+ + +DE+
Sbjct: 1092 YSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 1150
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 164/357 (45%), Gaps = 9/357 (2%)
Query: 150 GDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEE 206
G P + +++ L R + + +FDEM D N TY LL+ Y ++ +E
Sbjct: 200 GGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKE 259
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILN 265
AIG+F + G D+ + L+++LC+ + +E + F K D +L+
Sbjct: 260 AIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLH 319
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ G + + + ++++ +PD + + A K G + A+ F M ++G P
Sbjct: 320 GYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHP 379
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
++VT ++DALC ++ +A+ + + G PN + +LI LC + + E
Sbjct: 380 NIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELA 439
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYV 442
EM + G C PN I FN LL L K V + + M R + TY ++ Y
Sbjct: 440 VEMIGR-GIC-PNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYC 497
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ E M G+ P++ +Y +I+G GR+EDA S F +M KG+ P
Sbjct: 498 LDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNP 554
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 156/357 (43%), Gaps = 27/357 (7%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKE 216
N+ L + R V L +F+ MP DL TY I++ + A ++ A R
Sbjct: 69 LNSALSAVARESPAVAL-SLFNRMPRADLC---TYSIVIGCCSRAGHLDLAFAALGRVIR 124
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVAETF-------FESEKNEFGYDIKTMNIILNGWCV 269
G F LL LC K A N F Y NI+L G C
Sbjct: 125 TGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSY-----NILLKGLCD 179
Query: 270 LGNVYEA----KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+A D + C PD V+Y T +N L ++G+L A LF M ++G P
Sbjct: 180 ENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSP 239
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ +T NC++ C + EA+ + R+M G P+V TYN+L+ +LCK R +
Sbjct: 240 NCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVF 299
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYV 442
D M +K P+ + LL ++ +L+ M RNG + +N+++ Y
Sbjct: 300 DSMVKKGHK--PDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYA 357
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ + +M ++G+ P+ +Y ++ L G+++DA+S F + +G+ P
Sbjct: 358 KHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTP 414
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 192/438 (43%), Gaps = 56/438 (12%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F + ++G + P S+++ +L V++ Q+ D M PD +
Sbjct: 295 ARKVFDSMVKKG-HKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPD---HYIFN 350
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
IL+ YA MV+EA+ F + ++ G ++ + ++ LCR V+ A + F+ +E
Sbjct: 351 ILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISE 410
Query: 253 F----GYDIKTM--------------------------------NIILNGWCVLGNVYEA 276
G +T+ N +LN C G V A
Sbjct: 411 GLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRA 470
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
K + +++ + D +TY T ++ GK+ A +L + M G KP+ VT N II+
Sbjct: 471 KNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIING 530
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
C RI +A + R+M ++G P + Y++++ L + +R+ E M K G L
Sbjct: 531 YCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWM-IKCGIKL 589
Query: 397 PNEITFNYLLKSLKKPEEVPWVLERMERNGC----KMSTDTYNVILKLYVNWDCEDKVRH 452
P T+N +L+ L + L RM N C + T+N+++ + D+ +
Sbjct: 590 PIG-TYNIILQGLCQNNCTDDAL-RMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKD 647
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNI 512
+ + +G+ P+ +Y +M+ L ++G LE+ F + G + R ++N +
Sbjct: 648 LFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSR---MLNALVG 704
Query: 513 KLKERGEQGKKVIKLTSL 530
KL ++GE K + L+ +
Sbjct: 705 KLPQKGEVRKAGVYLSKI 722
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 135/324 (41%), Gaps = 45/324 (13%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL- 314
D+ T +I++ G++ A +I++ ++T++ + L + A+ +
Sbjct: 95 DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIA 154
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM----KNRGCLPNVTTYNSLIK 370
+ M G P+ + N ++ LC + R +AL +L M GC P+V +Y ++I
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGC 427
L + +++ Y DEM + S PN IT+N LL S KP+E + +M R+G
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMS--PNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGV 272
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL----- 482
+ TYN ++ + R ++ M KKG PD Y ++HG +G L
Sbjct: 273 EPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQ 332
Query: 483 ------------------------------EDALSYFHEMRLKGMVPEPRTGILVNDMNI 512
++A+ F +MR +G+ P T V D
Sbjct: 333 LLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALC 392
Query: 513 KLKERGEQGKKVIKLTSLGLKGNA 536
++ + + + +L S GL N
Sbjct: 393 RVGKVDDAMSQFDRLISEGLTPNG 416
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 12/202 (5%)
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL LF M + D+ T + +I + A L + G T++ L
Sbjct: 82 AVALSLFNRM----PRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPL 137
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM--- 422
+K LC KR + G C PN ++N LLK L + ++ +L M
Sbjct: 138 LKGLCHDKRTSDAMDIALRRMPALG-CTPNAFSYNILLKGLCDENRSQQALHLLHTMMAD 196
Query: 423 -ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
R GC +Y ++ + DK ++EM +GM P+ +Y ++HG G+
Sbjct: 197 DTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGK 256
Query: 482 LEDALSYFHEMRLKGMVPEPRT 503
++A+ F +M G+ P+ T
Sbjct: 257 PKEAIGIFRKMCRDGVEPDVVT 278
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 115/273 (42%), Gaps = 19/273 (6%)
Query: 141 TFFKWVSREGDYSPGSNVFNAIL--DVLGRARRFVELIQVF------DEMPDLV------ 186
T + +EG + N+F+ ++ DV + LI + DE L+
Sbjct: 456 TLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLD 515
Query: 187 ----NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
NE TY ++N Y +E+A +F + G + + +L L + + + A
Sbjct: 516 GVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAA 575
Query: 243 -ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
E + K I T NIIL G C +A R + ++ + T+ ++A
Sbjct: 576 KELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDA 635
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K G+ A LF ++ +G P+VVT ++ +L + + E ++ ++ GC +
Sbjct: 636 LLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTAD 695
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
N+L+ L + + YL ++++ N S
Sbjct: 696 SRMLNALVGKLPQKGEVRKAGVYLSKIDENNFS 728
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 177/391 (45%), Gaps = 44/391 (11%)
Query: 150 GDYSPGSNV--FNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
G P + V + A+ D RA R + +V MP N TY L++ V +A
Sbjct: 127 GACGPAATVVAYGALTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDA 186
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
+ V D G D+ + LL C+ + A + + E + T N++++G
Sbjct: 187 LSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDG 246
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTY------------------------------- 295
C G+V +A +++ C+P +V Y
Sbjct: 247 MCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPN 306
Query: 296 -ATF---VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
ATF + +L +KG L A++L + M + G ++VT N II+ LC ++ + A+ +L
Sbjct: 307 EATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLS 366
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+MK+ GC P++ TYN+L+K LC + E +D M Q NG CLP+ +TFN L+ L +
Sbjct: 367 KMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQ-NG-CLPDNVTFNTLIGFLCQ 424
Query: 412 PE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
+ V ++M GC ++ TY+ I+ D+ + EM KG PD +
Sbjct: 425 KGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KI 483
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
Y ++ L D +E+A+ +++ G+ P
Sbjct: 484 YQLLAECLNDDDTIEEAIQTVRKLQDSGISP 514
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 53/321 (16%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
D + L+ LCR + AE + + + +G+C G + +A+R
Sbjct: 102 DAALANRLVRDLCRRGRPDDAERVVGACGP--AATVVAYGALTDGYCRAGRLGDARRVVG 159
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+ +P++ TY ++ L ++G++ AL + M +G PDVVT N +++A C +
Sbjct: 160 GM---PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGR 216
Query: 342 RIPEALEVLREMKNRGCLPNVTT-----------------------------------YN 366
+A+E++ M+ GC PN T YN
Sbjct: 217 GYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYN 276
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERME 423
+++K LC +R E + EM ++N C PNE TFN ++ SL + ++ +LE+M
Sbjct: 277 TVLKGLCSAERWGDADELVTEMLREN--CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 334
Query: 424 RNGCKMSTDTYNVILKLYVNWDCE----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
++GC + TYN I +N CE D +M+ G PD +Y ++ GL
Sbjct: 335 KHGCTANIVTYNAI----INGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSA 390
Query: 480 GRLEDALSYFHEMRLKGMVPE 500
+ DA M G +P+
Sbjct: 391 AQWVDAEELMDNMTQNGCLPD 411
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 124/312 (39%), Gaps = 48/312 (15%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
W A + RE + P FN ++ L R + IQ+ ++M N TY
Sbjct: 288 WGDADELVTEMLRE-NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYN 346
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKN 251
++N V+ A+G+ + K +G D+ + LL LC V+ E +N
Sbjct: 347 AIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQN 406
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
D T N ++ C G + +A +K + C P+S+TY+T ++ L K KL A
Sbjct: 407 GCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQA 466
Query: 312 LRLFQAMWEKGRKPD----------------------------------VVTCNCIIDAL 337
L LF M KG PD V N I+ L
Sbjct: 467 LELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGL 526
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE-YLDEMEQKNGSCL 396
C + A++++ M + GC+P+ TY LI+ L YE YL+E +
Sbjct: 527 CRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL--------AYEGYLNEARELLIKLC 578
Query: 397 PNEITFNYLLKS 408
++ N L+KS
Sbjct: 579 SRDVLVNSLIKS 590
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 171/375 (45%), Gaps = 15/375 (4%)
Query: 137 EAAYTFFKWVSREGD-YSPGSNVFNAILDVLGRARRFVELIQVFDEM-------PDLVNE 188
+ A + F + R D P +N +++ +A+R E +F+ M P+LV
Sbjct: 129 DKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLV-- 186
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFE 247
TY +L++ Y + V E +G+ + + G D+ + +L+ C +E E F E
Sbjct: 187 -TYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDE 245
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ + ++ T + ++ G G EA KD+ PD V Y + L K G+
Sbjct: 246 MLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGR 305
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
G A+++ M +KG +P +T N +++ LC + R+ +A V+ M +G P+ TYN+
Sbjct: 306 AGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNT 365
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMER 424
L+K LC ++ + + + P+ T N L++ L K V + M
Sbjct: 366 LLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVE 425
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G + + TYN +++ Y+ + W+ + G P+ +Y+VMI+GL L
Sbjct: 426 MGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSV 485
Query: 485 ALSYFHEMRLKGMVP 499
A F +M+ G+ P
Sbjct: 486 ARGLFCKMKDSGIRP 500
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 168/374 (44%), Gaps = 41/374 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLN 196
+A F + + + P + ++D L +AR++ ++ V+ +M ++L
Sbjct: 23 DAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKM-------VSALVLP 75
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD 256
R+ + + E+ V F AF L L K FG +
Sbjct: 76 RFTSLSALTESF-VNTHHPSF-------AFSVLSLM----------------TKRGFGVN 111
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKS-KC-EPDSVTYATFVNALTKKGKLGTALRL 314
+ +N++L G+C G +A + + ++ C PD VTY T VN K +L A L
Sbjct: 112 VYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVL 171
Query: 315 FQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
F+AM + G +P++VT + +ID C + E L +L EM+ G +V Y+SLI C
Sbjct: 172 FEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFC 231
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMS 430
+ET E DEM ++ S PN +T++ L++ L + E +L+ M G +
Sbjct: 232 GEGDIETGRELFDEMLRRKVS--PNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPD 289
Query: 431 TDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
Y V+ L N D ++ + M +KG P +Y V+++GL + R++DA
Sbjct: 290 VVAYTVLADGLCKNGRAGDAIK-VLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVV 348
Query: 490 HEMRLKGMVPEPRT 503
M KG P+ T
Sbjct: 349 EMMVKKGKKPDAVT 362
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 162/376 (43%), Gaps = 12/376 (3%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYG 192
W A K ++ G P + + D L + R + I+V D M E TY
Sbjct: 271 WREASEMLKDMTARG-VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYN 329
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE---SE 249
+++N +++A GV + + G+ D + LL LC + A ++ SE
Sbjct: 330 VVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSE 389
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K D+ T N ++ G C G V++A R +++ + + VTY + KL
Sbjct: 390 KFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLI 449
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL+L++ E G P+ +T + +I+ LC + + A + +MK+ G P V YN+L+
Sbjct: 450 EALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALM 509
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNG 426
LC+ +E EM N + + ++FN ++ K +V +L M
Sbjct: 510 TSLCREDSLEQARSLFQEMRNVNHNV--DVVSFNIIIDGTLKAGDVKSAKELLSEMFMMD 567
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
T+++++ + D+ +E+M G P + ++ G KG E +
Sbjct: 568 LVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKII 627
Query: 487 SYFHEMRLKGMVPEPR 502
S H+M K +V + +
Sbjct: 628 SLLHQMADKDVVLDSK 643
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 161/387 (41%), Gaps = 54/387 (13%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D E F + R SP ++ ++ LGR R+ E ++ +M PD+V
Sbjct: 235 DIETGRELFDEMLRR-KVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVV-- 291
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE----VAET 244
Y +L + +AI V D + GE + ++ LC+ ++ V E
Sbjct: 292 -AYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEM 350
Query: 245 FFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK--CEPDSVTYATFVNAL 302
+ K D T N +L G C G ++EA WK ++ K +PD T + L
Sbjct: 351 MVKKGKKP---DAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGL 407
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K+G++ A R+ +M E G + ++VT N +I+ +++ EAL++ + G PN
Sbjct: 408 CKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNS 467
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERM 422
TY+ +I LCK++ + +M K+ P I +N L+ SL + + +
Sbjct: 468 MTYSVMINGLCKMQMLSVARGLFCKM--KDSGIRPTVIDYNALMTSLCREDSL------- 518
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
++ R ++EM D S+ ++I G G +
Sbjct: 519 -------------------------EQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDV 553
Query: 483 EDALSYFHEMRLKGMVPEPRT-GILVN 508
+ A EM + +VP+ T IL+N
Sbjct: 554 KSAKELLSEMFMMDLVPDAVTFSILIN 580
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 115/238 (48%), Gaps = 4/238 (1%)
Query: 159 FNAILDVLGRARRFVELIQVFD---EMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N +++ AR+ +E ++++ E N TY +++N M+ A G+F + K
Sbjct: 435 YNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMK 494
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCVLGNVY 274
+ G + + L+ LCR +E A + F+ +N D+ + NII++G G+V
Sbjct: 495 DSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVK 554
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
AK ++ PD+VT++ +N +K G L A+ L++ M G P VV + ++
Sbjct: 555 SAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLL 614
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
K + + +L +M ++ + + ++++ LC + R V + L + Q++
Sbjct: 615 KGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQQS 672
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 174/375 (46%), Gaps = 16/375 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY+ V + G Y P + FN +++ L + E + + M P++V TY
Sbjct: 119 AYSVLGKVMKLG-YEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVV---TYN 174
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKN 251
++N + A+ + + E D+ + ++ LCR ++ A + F E E
Sbjct: 175 SIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 234
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N ++ G C G + + KD+ K P+ +T+ ++ K+GKL A
Sbjct: 235 GIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEA 294
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L++ M KG P+ +T N ++D C + R+ EA +L M C P++ T+ SLIK
Sbjct: 295 NELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKG 354
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
CK+KR++ + ++ ++ + N +T++ L++ K E + + M G
Sbjct: 355 YCKVKRVDEGMKLFRKISKR--GLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVL 412
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TY ++L + +K +E+++K M D YT++I G+ G++EDA +
Sbjct: 413 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNL 472
Query: 489 FHEMRLKGMVPEPRT 503
F + KG+ P T
Sbjct: 473 FCSLPCKGVKPNVMT 487
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 122/246 (49%), Gaps = 12/246 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + +N+++D R E + D M PD+V T+ L+ Y V+E
Sbjct: 307 SPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIV---TFTSLIKGYCKVKRVDE 363
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
+ +F + + G + + + L+ C+ +E+AE F+ E G D+ T I+L
Sbjct: 364 GMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQ-EMVSLGVLPDVMTYGILL 422
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G C G + +A ++D+ KSK D V Y + + K GK+ A LF ++ KG K
Sbjct: 423 DGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVK 482
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+V+T +I LC K + EA +LR+M+ G PN TYN+LI+ + + +
Sbjct: 483 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKL 542
Query: 385 LDEMEQ 390
++EM+
Sbjct: 543 IEEMKS 548
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 129/303 (42%), Gaps = 41/303 (13%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNII 263
++AI +F L L F + K + F + E N ++I T+NI+
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N +C +C Y+ LG ++L G
Sbjct: 107 INCFC------------------RCCKTCFAYSV----------LGKVMKL-------GY 131
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+PD T N +I+ LC + ++ EA+ ++ M GC PNV TYNS++ +CK +
Sbjct: 132 EPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALD 191
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
L +M+++N + T++ ++ SL + + + + ME G K S TYN ++
Sbjct: 192 LLRKMDERNVK--ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGG 249
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ ++M + + P+ ++ V+I +G+L++A + EM KG+ P
Sbjct: 250 LCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPN 309
Query: 501 PRT 503
T
Sbjct: 310 TIT 312
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 8/257 (3%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A ++++I+S+ P V ++ F + + + L + M G ++ T N +I
Sbjct: 48 DAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMI 107
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C + A VL ++ G P+ TT+N+LI LC ++ + M + NG
Sbjct: 108 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVE-NG- 165
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
C PN +T+N ++ + K + L+ +M+ K TY+ I+ C D
Sbjct: 166 CQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAI 225
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
++EME KG+ +Y ++ GL G+ D + +M + ++P T ++ D+
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVF 285
Query: 512 I---KLKERGEQGKKVI 525
+ KL+E E K++I
Sbjct: 286 VKEGKLQEANELYKEMI 302
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 4/224 (1%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP F +++ + +R E +++F ++ + N TY IL+ + + +E A
Sbjct: 342 SPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEE 401
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWC 268
+F G L D+ + LL LC +E A FE +K++ DI II+ G C
Sbjct: 402 LFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMC 461
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G V +A + + +P+ +TY ++ L KKG L A L + M E G +P+
Sbjct: 462 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDC 521
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
T N +I A + + +++ EMK+ G + ++ +I L
Sbjct: 522 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 163/338 (48%), Gaps = 7/338 (2%)
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAE 243
L N TY +++ Y +EA G G +L F ++ LCR + E +E
Sbjct: 15 LPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSE 74
Query: 244 TFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
E + + D T N ++NG+C GN ++A +++++ P+ VTY + +N++
Sbjct: 75 VLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMC 134
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K G L A+ F M +G P+ T II+ + + EA VL EM G +P++
Sbjct: 135 KAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIV 194
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE-RM 422
TYN+LI C + RME L +M K LP+ ++++ ++ + +E+ + ++
Sbjct: 195 TYNALINGHCVLGRMEEAIGLLQDMVGK--GVLPDVVSYSTIISGFARNQELDRAFQMKV 252
Query: 423 ERNGCKMSTD--TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
E G + D TY+ +++ + ++EM + PD+ +YT +I+ +G
Sbjct: 253 EMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEG 312
Query: 481 RLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKER 517
L AL EM KG +P+ T +L+N +N + + +
Sbjct: 313 DLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSK 350
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 176/427 (41%), Gaps = 66/427 (15%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+ A+ F + + +G P FN I++ L R R E +V EM PD E T
Sbjct: 35 DEAFGFLRSMGLKG-LEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPD---EVT 90
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF---- 246
Y L+N Y +A+ + G ++ + +L+ +C+ ++ A FF
Sbjct: 91 YNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMH 150
Query: 247 --------------------------------ESEKNEFGYDIKTMNIILNGWCVLGNVY 274
E ++ F I T N ++NG CVLG +
Sbjct: 151 VRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRME 210
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA +D++ PD V+Y+T ++ + +L A ++ M K PD VT + +I
Sbjct: 211 EAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLI 270
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
LC ++R+ EA ++ +EM P+ TY +LI CK + DEM QK
Sbjct: 271 QGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQK--G 328
Query: 395 CLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE---- 447
LP+ +T+N L+ L K +E +L ++ + S TYN +++ N + +
Sbjct: 329 FLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVA 388
Query: 448 -----------DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
D+ +E M K P++ Y V+IHG G + A + EM
Sbjct: 389 LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVD 448
Query: 497 MVPEPRT 503
VP T
Sbjct: 449 FVPHTVT 455
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 125/262 (47%), Gaps = 5/262 (1%)
Query: 245 FFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
F E E+N ++ T N +++G+C L EA F + + EP+ +T+ +N L +
Sbjct: 6 FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
G+L + M KG PD VT N +++ C + +AL + EM G PNV T
Sbjct: 66 DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLER 421
Y SLI +CK + E+ D+M + G C PNE T+ ++ + +E VL
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVR-GLC-PNERTYTTIINGFAQQGLLDEAYRVLNE 183
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M R+G S TYN ++ + ++ ++M KG+ PD SY+ +I G
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243
Query: 482 LEDALSYFHEMRLKGMVPEPRT 503
L+ A EM K ++P+ T
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVT 265
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 5/226 (2%)
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
RF+K++ ++ C P+ VTY T ++ K + A ++M KG +P+++T N II+ L
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C R+ E EVL EM +G +P+ TYN+L+ CK EM + S P
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS--P 121
Query: 398 NEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N +T+ L+ S+ K + +E +M G + TY I+ + D+
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
EM + G P +Y +I+G GR+E+A+ +M KG++P+
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPD 227
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
LR F+ M G P+VVT N +ID C KR EA LR M +G PN+ T+N +I
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGC 427
LC+ R++ E L EM +K +P+E+T+N L+ K L M RNG
Sbjct: 62 GLCRDGRLKETSEVLVEMSRK--GYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGL 119
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ TY ++ ++ +++M +G+ P++R+YT +I+G +G L++A
Sbjct: 120 SPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYR 179
Query: 488 YFHEMRLKGMVPEPRT 503
+EM G +P T
Sbjct: 180 VLNEMTRSGFIPSIVT 195
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 149/352 (42%), Gaps = 36/352 (10%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A FF + G P + I++ + E +V +EM P +V TY
Sbjct: 142 AMEFFDQMHVRG-LCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIV---TYN 197
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
L+N + +EEAIG+ G L D+ ++ ++ R + ++ A F+ +
Sbjct: 198 ALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRA---FQMKVEM 254
Query: 253 FGY----DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
G D T + ++ G C + EA +++++ K PD TY T +NA K+G L
Sbjct: 255 IGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDL 314
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL L M +KG PD VT N +I+ L + R EA +L ++ +P+ TYN+L
Sbjct: 315 NKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTL 374
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
I++ C I E+ + G C +K L +E V E M K
Sbjct: 375 IENCCNI-------EFKSAVALVKGFC----------MKGLM--DEADQVFESMINKNHK 415
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
+ YNVI+ + K ++EM P + ++ L+ +G
Sbjct: 416 PNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEG 467
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 25/259 (9%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +++++ L RR E +F EM PD E TY L+N Y + +A
Sbjct: 261 PDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPD---EFTYTTLINAYCKEGDLNKA 317
Query: 208 IGVFDRRKEFGELDDLSAF----------------QNLLLWLCRYKHVEVAETFFESEKN 251
+ + D + G L D + + LLL L + A T+ +N
Sbjct: 318 LHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIEN 377
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ K+ ++ G+C+ G + EA + ++ +I +P+ Y ++ + G + A
Sbjct: 378 CCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKA 437
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+L++ M P VT ++ AL + E EV+ ++ L + L++
Sbjct: 438 YKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEI 497
Query: 372 LCKIKRMETVYEYLDEMEQ 390
K M+ V+ L EM +
Sbjct: 498 NQKEGNMDMVFNLLTEMAK 516
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 177/372 (47%), Gaps = 9/372 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILL 195
A FK + RE P ++ +++ L G ++ +L+++ ++ N +TY I++
Sbjct: 161 AVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVI 220
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFG 254
+ + M++ A + + K+ D+ + L+ LC+ E T F E
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIY 280
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T N +++G C G V +A+ + +I+ +PD +TY ++ +G++ A +
Sbjct: 281 PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREI 340
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F +M K +PD+++ N +I+ +K+I EA++V RE+ +G P++ T N L+ L +
Sbjct: 341 FDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFE 400
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMST 431
+ R ++ + DEM + +P+ T LL K EE ++ER +
Sbjct: 401 LGRTKSAQNFFDEM--LSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNI 458
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
Y ++ DK T+E++ G+ PD +YT MI G +G L++A +
Sbjct: 459 QIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRK 518
Query: 492 MRLKGMVPEPRT 503
M G + + RT
Sbjct: 519 MEDNGCLADNRT 530
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 142/353 (40%), Gaps = 52/353 (14%)
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFG 254
N + +++A +F + L +++F LL + KH V F E K
Sbjct: 45 NEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIP 104
Query: 255 YDIKTMNIILNGWCV-----LGNVYEAKRFWKDIIKSKCEPDSVTYATFV---------- 299
++I++N C+ LG A F K I + VT+ T +
Sbjct: 105 VHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGI-----PYNEVTFTTLIRGLFAENKVK 159
Query: 300 --------------------------NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
N L KKG A L + M + KP+ T +
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIV 219
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
IDA C + A +L EMK + P++ TY++LI LCK+ + E V EM N
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLN- 278
Query: 394 SCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
PN TFN ++ L K E+ ++ M G TYN+I+ Y D+
Sbjct: 279 -IYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRA 337
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
R ++ M K + PD SY ++I+G + ++++A+ E+ KG+ P T
Sbjct: 338 REIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVT 390
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 12/254 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E P +N I+D G + ++FD M PD++ +Y IL+N YA
Sbjct: 311 EKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDII---SYNILINGYARQK 367
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTM 260
++EA+ V + G + LL L + A+ FF+ E G+ D+ T
Sbjct: 368 KIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD-EMLSAGHIPDLYTH 426
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+L G+ G V EA + + + + + + Y ++ L K GKL A F+ +
Sbjct: 427 CTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPL 486
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G PDV+T +I C + + EA ++LR+M++ GCL + TYN +++ + ++
Sbjct: 487 IGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546
Query: 381 VYEYLDEMEQKNGS 394
+ +L+E+ K+ S
Sbjct: 547 MKAFLEEIAGKSFS 560
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 20/239 (8%)
Query: 295 YATFVNALTKKGKLGT------------ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
Y+T +++ KG G A LF+ M P V + + ++ A+ K
Sbjct: 28 YSTNTCSISVKGNFGVSNEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKH 87
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP-NEIT 401
+ + RE+ + + ++ C + R + + L + K G +P NE+T
Sbjct: 88 YSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVL-AIHFKKG--IPYNEVT 144
Query: 402 FNYLLKSL---KKPEEVPWVLERMER-NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
F L++ L K ++ + +++ R N C+ + Y ++ K M
Sbjct: 145 FTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLM 204
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKE 516
E+ P+ R+YT++I G L+ A S +EM+ K + P+ T + D KL +
Sbjct: 205 EQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ 263
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 11/199 (5%)
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYA 199
+S++G P N +L L R FDEM PDL T+ LL Y
Sbjct: 379 ISQKG-LKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLY---THCTLLGGYF 434
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIK 258
+VEEA+ F + + E ++ + ++ LC+ ++ A FE D+
Sbjct: 435 KNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVI 494
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T +++G+C G + EAK + + + C D+ TY V + K+ + +
Sbjct: 495 TYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554
Query: 319 WEKGRKPDVVTCNCIIDAL 337
K + T ++D +
Sbjct: 555 AGKSFSFEAATVELLMDII 573
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 207/496 (41%), Gaps = 72/496 (14%)
Query: 80 SEFQRYPGDEIAI-NVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEA 138
S ++ D++A NV ++LK S E +L ++ ++ VI+ R D +
Sbjct: 30 SRPSQFSSDQVAAHNVASLLK----SPNWEKNSSLKSLVSHMSPNVASQVISLQRSDNDI 85
Query: 139 AYTFFKWVSREGDYS-------------PGSNVFNAILDVLGRARR--------FVELIQ 177
FF WV + Y S +F DV+ R ++LI
Sbjct: 86 CVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLFRVAHDVIVALIRECSRCEKEMLKLIS 145
Query: 178 VFDEMPDL----VNEKTYGILLNRYAAAHMVEEA-------------IGVFDRRK----- 215
FDE+ ++ +N Y LL A + A +G+ D R
Sbjct: 146 CFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNAL 205
Query: 216 -----------------EFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYD 256
+ G L D +LLL CR ++ A F+ S + +
Sbjct: 206 CKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPN 265
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ +I+++G C +G + EA + + C+P + TY + AL +G + A LF
Sbjct: 266 SVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFD 325
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M +G KP+V T +ID LC +I EA V R+M G P+V TYN+LI CK
Sbjct: 326 EMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDG 385
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDT 433
R+ +E L ME++ +C PN TFN L++ L KP + +L+RM NG +
Sbjct: 386 RVVPAFELLTVMEKR--ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
YNV++ + M + PD ++T +I+ +G+ + A ++ M
Sbjct: 444 YNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 494 LKGMVPEPRTGILVND 509
KG+ + TG + D
Sbjct: 504 RKGISLDEVTGTTLID 519
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 177/413 (42%), Gaps = 41/413 (9%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD 184
IVN + + + EAA F + + G + S++ ++L R + ++VFD M
Sbjct: 201 IVNALCKNGY-TEAAEMFMCKILKVG-FLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSR 258
Query: 185 ----LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
N +Y IL++ +EEA G+ D+ E G + L+ LC ++
Sbjct: 259 EGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLID 318
Query: 241 VAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
A F E ++ T ++++G C G + EA + ++K P +TY +
Sbjct: 319 KAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALI 378
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
N K G++ A L M ++ KP+V T N +++ LC + +A+ +L+ M + G
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
P++ +YN LI LC+ M Y+ L M + P+ +TF ++ + K
Sbjct: 439 PDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLE--PDCLTFTAIINAFCK-------- 488
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+ D + L L M +KG+ D+ + T +I G+ +
Sbjct: 489 --------QGKADVASAFLGL----------------MLRKGISLDEVTGTTLIDGVCNV 524
Query: 480 GRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGL 532
G+ DAL + M+ P + ++ DM K + E+ + K+ LGL
Sbjct: 525 GKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGL 577
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 170/407 (41%), Gaps = 44/407 (10%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A F +SREG +P S ++ ++ L R E + D+M + + +TY +L+
Sbjct: 249 ALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE---------VAETFF 246
++++A +FD G ++ + L+ LCR +E V + F
Sbjct: 309 KALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIF 368
Query: 247 ES---------------------------EKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
S EK +++T N ++ G C +G Y+A
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K ++ + PD V+Y ++ L ++G + A +L +M +PD +T II+A C
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCK 488
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ + A L M +G + T +LI +C + + L+ + + P+
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHS 548
Query: 400 --ITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEE 456
+ + L K K EE+ +L ++ + G S TY ++ L + D R E
Sbjct: 549 LNVILDMLSKGCKLKEELA-MLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFR-MLEL 606
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
M+ G P+ YT++I+GL GR+E+A M+ G+ P T
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/379 (19%), Positives = 152/379 (40%), Gaps = 46/379 (12%)
Query: 137 EAAYTFFKWVSREG---DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI 193
+ A F + R+G D G+ + + + +V G+ R + +++ +M L + +
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCNV-GKTRDALFILETLVKMRMLTTPHSLNV 551
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
+L+ + ++E + + + + G + + + L+ L R
Sbjct: 552 ILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS----------------- 594
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
G++ + R + + S C P+ Y +N L + G++ A +
Sbjct: 595 -----------------GDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK 637
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
L AM + G P+ VT ++ ++ ALE +R M RG N Y+SL++
Sbjct: 638 LLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFV 697
Query: 374 KIKR------METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC 427
++ E + E + +EQ GS I L + +E +++ + ++G
Sbjct: 698 LSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGV 757
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ ++I++ Y + K + K G P +S+ ++I GL +G E A
Sbjct: 758 FLE-KAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARE 816
Query: 488 YFHEMRLKGMVPEPRTGIL 506
E+ V E ++G+L
Sbjct: 817 LVMELLTSNGVVE-KSGVL 834
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 166/399 (41%), Gaps = 46/399 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF-----DEMPDLVNEKTYGI 193
A + R +P +NA+L L RA + + ++ D +P T+G+
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPP--TTFTFGV 185
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
+A+ + G + D +Q ++ L V A T + E
Sbjct: 186 AARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLD-EMLLM 244
Query: 254 G--YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA--------------- 296
G D+ T N ++ G C LG+V EA R ++ C P VTY
Sbjct: 245 GCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEA 304
Query: 297 ----------------TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
T + +GKL A L++ M KG PDV T N ++ LC
Sbjct: 305 YAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKL 364
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
R A+ +L EM+ +GC PN+ TY++L+ C+ + LD+M K S N
Sbjct: 365 GRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSM--NSQ 422
Query: 401 TFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
+N ++ +L K +E +++ M+ GCK TYN I+ N D D+ H + +
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++G+ + +Y +IH L GR ++ L +EM L G
Sbjct: 483 LEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHG 521
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 164/358 (45%), Gaps = 27/358 (7%)
Query: 157 NVFN-AILDVLG-----RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
N FN +L + G A R V+ + + P +V TYG LL +EA +
Sbjct: 251 NTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVV---TYGFLLRGLCRTRQADEAYAM 307
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
R E + + + L K E + D+ T NI+++G C L
Sbjct: 308 LGRVPEVNVVMLNTVIRG---CLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKL 364
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G A R ++ + C P+ VTY+T +++ + G A + M KG +
Sbjct: 365 GRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGY 424
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N II AL ++ EA+ +++EMK++GC P++ TYN++I HLC +M DE E
Sbjct: 425 NGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQM-------DEAEH 477
Query: 391 KNGSCL-----PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
G+ L N IT+N L+ +L + +E + M +GC + +YN ++K
Sbjct: 478 IFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALC 537
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D+ EEM KG+ P+ SY ++I+ L G++ DAL EM +G+ P+
Sbjct: 538 KEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPD 595
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 147/349 (42%), Gaps = 10/349 (2%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L RA E++ PD+ TY IL++ A+ + D +E G ++
Sbjct: 332 LARATELYEMMGSKGCPPDV---HTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVT 388
Query: 226 FQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ LL CR + A + F + + N I+ G + EA R +++
Sbjct: 389 YSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMK 448
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
C+PD TY T + L ++ A +F + E+G + +T N +I AL R
Sbjct: 449 SQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQ 508
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
E L + EM GC +V +YN LIK LCK ++ L+EM K PN ++N
Sbjct: 509 EGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIK--PNNFSYNM 566
Query: 405 LLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ L K +V LE M G TYN ++ + E++ +
Sbjct: 567 LINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN 626
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVND 509
+ PD +Y ++I L+DA + G+VP RT G++V +
Sbjct: 627 VHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQN 675
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 9/228 (3%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A ++ +++ + P + T+ AL + G+ AL L + M G PD V +I
Sbjct: 163 DALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVI 222
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
AL + + EA +L EM GC +V T+N ++ LC + + +D M
Sbjct: 223 HALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMH--G 280
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
C P+ +T+ +LL+ L ++ +E +L R+ +++ N +++ + +
Sbjct: 281 CTPSVVTYGFLLRGLCRTRQADEAYAMLGRVP----EVNVVMLNTVIRGCLAEGKLARAT 336
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+E M KG PD +Y +++HGL GR A+ EM KG P
Sbjct: 337 ELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAP 384
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 38/274 (13%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILL 195
W+ A +S +G +S S +N I+ LG+ + E +++ EM
Sbjct: 402 WDDARAMLDQMSAKG-FSMNSQGYNGIIYALGKDGKLDEAMRLVQEM------------- 447
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEF 253
K G D+ + ++ LC ++ AE F + E+
Sbjct: 448 -------------------KSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVV 488
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
I T N +++ G E R +++ C D V+Y + AL K+G + ++
Sbjct: 489 ANGI-TYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMM 547
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
L + M KG KP+ + N +I+ LC ++ +ALE+ +EM N+G P++ TYN+LI LC
Sbjct: 548 LLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLC 607
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
K+ L+++ +N P+ +T+N L+
Sbjct: 608 KVGWTHAALNLLEKLPNENVH--PDIVTYNILIS 639
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 173/370 (46%), Gaps = 10/370 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
E AY F + +G P + ++D L +A+ VF +M D + TY
Sbjct: 178 EKAYNLFLEMMDQG-IPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNC 236
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNE 252
L++ Y + +E + + + G D + LL +LC+ A FF+S +
Sbjct: 237 LIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKG 296
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D+ I+L+G+ G + E F ++ + P+ + A KK + A+
Sbjct: 297 IKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAM 356
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+F M ++G PDVV+ +IDALC R+ +A+ +M N G PN+ ++SL+ L
Sbjct: 357 HIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGL 416
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
C + + E E E+ + G C+ + + FN L+ +L + E +++ M R G +
Sbjct: 417 CTVGKWEKAEELFFEVLDQ-GICV-DAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRP 474
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ +YN ++ + D+ + M G+ P++ +YT+++ G R++DA S F
Sbjct: 475 NVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLF 534
Query: 490 HEMRLKGMVP 499
EM +KG+ P
Sbjct: 535 REMLMKGVTP 544
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 160/361 (44%), Gaps = 17/361 (4%)
Query: 154 PGS-NVFNAILDVLGRA---RRFVELIQVFDEMPDLVNEK------TYGILLNRYAAAHM 203
P S FN +L V+ RA ++ +F M + K TY IL+ +
Sbjct: 46 PASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGR 105
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMN 261
+E F + G ++ LL LC K V+ A +EFG D+ N
Sbjct: 106 LEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYN 165
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++NG+ G V +A + +++ P+ VTY T ++ L K + A +FQ M ++
Sbjct: 166 TVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDR 225
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G KPD T NC+I + E +++L EM G P+ TY L+ +LCK R
Sbjct: 226 GVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREA 285
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
+ D M +K P+ + LL E+ L+ M NG + +N++
Sbjct: 286 RLFFDSMFRKGIK--PDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMF 343
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
Y ++ H + +M ++G+ PD S+ +I L GR++DA+ F++M +G+
Sbjct: 344 CAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVT 403
Query: 499 P 499
P
Sbjct: 404 P 404
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 166/388 (42%), Gaps = 18/388 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +FN + + E + +F++M PD+V ++G L++ V++
Sbjct: 333 SPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVV---SFGALIDALCKLGRVDD 389
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE-TFFESEKNEFGYDIKTMNIILN 265
A+ F++ G ++ F +L+ LC E AE FFE D N ++
Sbjct: 390 AVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMC 449
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G V EA+R +I+ P+ ++Y T V G++ A +L M G KP
Sbjct: 450 NLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKP 509
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ T ++ C +R+ +A + REM +G P V TYN+++ L + R E
Sbjct: 510 NEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELY 569
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
M C + T+N +L L K +E + R+ ++ + T+N+++ +
Sbjct: 570 LNMINSRTKC--DIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALL 627
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
++ + + G+ PD +Y ++ L ++G L + F M G P
Sbjct: 628 KGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSH 687
Query: 503 TGILVNDMNIKLKERGEQGKKVIKLTSL 530
++N + +L RG+ + + L L
Sbjct: 688 ---MLNALVRRLLHRGDISRAGVYLYKL 712
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 8/221 (3%)
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
SK P++ TY+ + + G+L F + + G + +V+ + ++ LC KR+
Sbjct: 83 SSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVD 142
Query: 345 EALEVLR-EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE-YLDEMEQKNGSCLPNEITF 402
EA ++L M GC P+V YN++I + ++E Y +L+ M+Q PN +T+
Sbjct: 143 EATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQ---GIPPNVVTY 199
Query: 403 NYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
++ L K + V V ++M G K TYN ++ Y++ +V EEM
Sbjct: 200 TTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMST 259
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
G+ PD +Y +++ L GR +A +F M KG+ P+
Sbjct: 260 HGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPD 300
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETF 245
NE TY ILL Y A V++A +F G ++ + +L L + + E E +
Sbjct: 510 NEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELY 569
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ DI T NIILNG C V EA + ++ + + DSVT+ + AL K
Sbjct: 570 LNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKG 629
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G+ A+ LF + G PDVVT I + L + + E + M+ G PN
Sbjct: 630 GRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHML 689
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
N+L++ L + YL ++++KN S
Sbjct: 690 NALVRRLLHRGDISRAGVYLYKLDEKNFS 718
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 172/375 (45%), Gaps = 28/375 (7%)
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQ-VFDEM------PDLVNEKTYGILLNRY 198
+S+ + PG +NA+LD R++R + + VF EM P++ TY IL+ +
Sbjct: 159 LSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVF---TYNILIRGF 215
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKNE 252
A ++ A+ FDR ++ G L ++ + L+ C+ + ++ S E N
Sbjct: 216 CLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNL 275
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
Y N+++NG C G + E ++ K D VTY T + K+G AL
Sbjct: 276 ISY-----NVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ M G P V+T +I ++C + A E L +M+ RG PN TY +L+
Sbjct: 331 VMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKM 429
+ M Y L EM S P+ +T+N L+ K + VLE M+ G
Sbjct: 391 SQKGYMNEAYRVLKEMIDNGFS--PSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTP 448
Query: 430 STDTYNVILKLYV-NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+Y+ +L + ++D ++ +R +M KG+ PD +Y+ +I G ++ R ++A
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALR-VKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 489 FHEMRLKGMVPEPRT 503
F EM G+ P+ T
Sbjct: 508 FDEMLRVGLPPDEFT 522
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 160/329 (48%), Gaps = 9/329 (2%)
Query: 179 FDEMPDLVNEKT--YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
E DL N + + +++ Y+ ++++A+ + + G + + ++ +L R
Sbjct: 123 LQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRS 182
Query: 237 K-HVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
K ++ AE F E +++ ++ T NI++ G+C+ GN+ A RF+ + K C P+ VT
Sbjct: 183 KRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVT 242
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y T ++ K K+ L ++M KG +P++++ N +I+ LC + R+ E VL EM
Sbjct: 243 YNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMN 302
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP-- 412
RG + TYN+LIK CK EM + S P+ IT+ L+ S+ K
Sbjct: 303 KRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLS--PSVITYTSLIHSMCKAGN 360
Query: 413 -EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
L++M G + TY ++ + ++ +EM G P +Y
Sbjct: 361 MNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNA 420
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+I+G G++ DA++ +M+ KG+ P+
Sbjct: 421 LINGHCIAGKMVDAIAVLEDMKEKGLTPD 449
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 166/407 (40%), Gaps = 55/407 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N +++ L R R E+ V EM ++E TY L+ Y +A+ +
Sbjct: 273 PNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCV 269
G + + +L+ +C+ ++ A F + + + +T +++G+
Sbjct: 333 HAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA R K++I + P VTY +N GK+ A+ + + M EKG PDVV+
Sbjct: 393 KGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVS 452
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM- 388
+ ++ C + EAL V R+M +G P+ TY+SLI+ C+ +R + + DEM
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEML 512
Query: 389 --------------------------------EQKNGSCLPNEITFNYLLKSLKK---PE 413
E LP+ +T++ L+ L K
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTR 572
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR---------------HTWEEME 458
E +L ++ S TY+ +++ N + + V +E M
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
+K PD +Y VMIHG G + A S + EM G + T I
Sbjct: 633 EKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVI 679
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 149/338 (44%), Gaps = 24/338 (7%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+ RA F++ ++V P NE+TY L++ ++ + EA V + G +
Sbjct: 361 MNRATEFLDQMRVRGLCP---NERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVT 417
Query: 226 FQNLLLWLC-RYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ C K V+ + ++ D+ + + +L+G+C +V EA R + ++
Sbjct: 418 YNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMV 477
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+PD++TY++ + ++ + A LF M G PD T +I+A C + +
Sbjct: 478 AKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQ 537
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A+++ EM +G LP+V TY+ LI L K R L ++ + +P+++T++
Sbjct: 538 KAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEES--VPSDVTYHT 595
Query: 405 LLKSLKKPE------------------EVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
L+++ E E V E M K YNV++ +
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGD 655
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
K ++EM K G + ++ L+ +G++ +
Sbjct: 656 IRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNE 693
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 119/293 (40%), Gaps = 61/293 (20%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY K + G +SP +NA+++ A + V+ I V ++M PD+V +Y
Sbjct: 399 AYRVLKEMIDNG-FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVV---SYS 454
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKN 251
+L+ + ++ V+EA+ V + G D + +L+ C + E + F E +
Sbjct: 455 TVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRV 514
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK------- 304
D T ++N +C+ G++ +A + ++++ PD VTY+ +N L K
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREA 574
Query: 305 -------------------------------------------KGKLGTALRLFQAMWEK 321
KG + A ++F++M EK
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEK 634
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
KPD N +I C I +A + +EM G L + T +L+K L K
Sbjct: 635 NHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHK 687
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 114/267 (42%), Gaps = 27/267 (10%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +++++ RR E +FDEM PD E TY L+N Y +++A
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPD---EFTYTALINAYCMEGDLQKA 539
Query: 208 IGVFDRRKEFGELDDLSAF----------------QNLLLWLCRYKHVEVAETFFESEKN 251
I + + E G L D+ + + LLL L + V T+ +N
Sbjct: 540 IQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ K++ ++ G+C+ G + EA + ++ +++ +PD Y ++ + G + A
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKA 659
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L++ M + G VT ++ L + ++ E V+ + L L++
Sbjct: 660 YSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEI 719
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPN 398
+ M+ V + L EM K+G LPN
Sbjct: 720 NHREGNMDVVLDVLAEM-AKDGF-LPN 744
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 165/376 (43%), Gaps = 40/376 (10%)
Query: 154 PGSNV--FNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
P NV +N +L L A R + Q+FDEM + TYGIL++ + A +E A+ +
Sbjct: 255 PHKNVCSYNILLKALCDAGRVKDARQLFDEMASAPDVVTYGILIHGHCALGELENAVKLL 314
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVL 270
D G + + + +++ LC + A E + + D +L+G+C
Sbjct: 315 DEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNK 374
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G++ A+R++ ++ + D VTY T +N L + +L A +L Q MW + D VT
Sbjct: 375 GDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTY 434
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+ID C + ++ EA ++ M RG PNV TY +L LCK ++ E L EM
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
K +E N C TYN ++ ++
Sbjct: 495 KG-----------------------------LELNAC-----TYNSLINGLCKAGYLEQA 520
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVND 509
T +M+ + PD +YT +I L G L+ A S EM KG+ P T +L+N
Sbjct: 521 MRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMN- 579
Query: 510 MNIKLKERGEQGKKVI 525
+ R E GKK++
Sbjct: 580 -GFCMSGRVEGGKKLL 594
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 179/407 (43%), Gaps = 47/407 (11%)
Query: 106 KGEIEKALN------QCELTLTDDLIVNVINRY--RFDWEAAYTFFKWVSREGDYSPGSN 157
KG I AL Q ++ L + L V++ + + D +A +F + R+G + G
Sbjct: 339 KGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGV- 397
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
+ +++ L RA E ++ EM V+E TY +L++ Y + EA + +
Sbjct: 398 TYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAM 457
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
+ G ++ + L LC+ V+ A E E + T N ++NG C G +
Sbjct: 458 VQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYL 517
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+A R D+ + +PD TY T ++AL K G L A L Q M +KG KP +VT N +
Sbjct: 518 EQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVL 577
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
++ C R+ ++L M + PN TYNSL+K C M++ E M ++
Sbjct: 578 MNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDV 637
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
PNE T+N L+K CK N+ LY +
Sbjct: 638 G--PNENTYNILIK-----------------GHCK----ARNMKEALYFH---------- 664
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+EM +KG SY+ +I L K + +A FH+MR +G+ E
Sbjct: 665 -DEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAE 710
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 123/281 (43%), Gaps = 37/281 (13%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
++ + NI+L C G V +A++ + ++ + PD VTY ++ G+L A++L
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLL 314
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M G +P+ ++ LC K I +AL V+ +M R + + Y +++ C
Sbjct: 315 DEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNK 374
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYN 435
+ + + DEM++K + + +T+ ++ L + E LE E+
Sbjct: 375 GDLVSARRWFDEMQRKGLAT--DGVTYTTMINGLCRAVE----LEEAEK----------- 417
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+EM + + D+ +YTV+I G +G++ +A + M +
Sbjct: 418 -----------------LLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQR 460
Query: 496 GMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
G+ P T + D K + + + ++++ GL+ NA
Sbjct: 461 GVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNA 501
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 102/262 (38%), Gaps = 13/262 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D +AA +S +G + +N++++ L +A + ++ +M PD+
Sbjct: 481 DVQAANELLHEMSNKG-LELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVY-- 537
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE- 247
TY L++ + ++ A + + G + + L+ C VE + +
Sbjct: 538 -TYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDW 596
Query: 248 -SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
EKN + T N ++ +C+ N+ +K + P+ TY + K
Sbjct: 597 MLEKN-IHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKAR 655
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ AL M +KG + + + +I L KK+ EA E+ +M+ G Y+
Sbjct: 656 NMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYD 715
Query: 367 SLIKHLCKIKRMETVYEYLDEM 388
I +E+ DE+
Sbjct: 716 FYIDLNFNEDNLESTLALCDEL 737
>gi|297806669|ref|XP_002871218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317055|gb|EFH47477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1029
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 181/418 (43%), Gaps = 48/418 (11%)
Query: 92 INVQNILKTCSVSTKGE-IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
++VQ I S S E ++AL + + T +L+V V+ + A FF WV +
Sbjct: 611 MDVQEICHVLSSSRDWERTQEALEKLTVQFTPELVVEVLRNAKIQGNAVLRFFSWVGKRN 670
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEA 207
Y S +N + V G + F ++ +F EM L+ + T+ I++ +Y + A
Sbjct: 671 GYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIA 730
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE---TFFESEKNEFGYDIKTMNIIL 264
I F K+ G + S F+ L+ LC K V E TF E ++ F D + + L
Sbjct: 731 IRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATKTFREMIRSGFVPDRELVQDYL 790
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C +GN +AK + K P V Y+ ++ AL++ GKL AL +
Sbjct: 791 GCLCEVGNTKDAKSCLDSLGKIGF-PVPVAYSIYIRALSRIGKLEEALSELASFEGDRSL 849
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
D T I+ L + + +AL+ + MK G P V Y SLI H K K+ E V E
Sbjct: 850 LDQYTYGSIVHGLLQRGDLHKALDKVNSMKEIGIKPGVHVYTSLIVHFFKEKQFEKVLET 909
Query: 385 LDEMEQKNGSCLPNEITFNYLL---KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
+M+++ SC P+ +T+ ++ SL K EE W
Sbjct: 910 CHKMKEE--SCEPSVVTYTAMICGYMSLGKVEEA-W------------------------ 942
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +E+KG PD ++Y+ I+ L G+ EDAL EM KG+ P
Sbjct: 943 ----------KAFRNIEEKGTSPDFKTYSKFINCLCQAGKSEDALKLLSEMLDKGIAP 990
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 159/383 (41%), Gaps = 43/383 (11%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM 182
+++ NV+ R A FF WV + +S ++N +L + G AR + ++ EM
Sbjct: 155 EIVENVLKRCFKVPHLAMRFFNWVKLKDGFSHRVGIYNTMLSIAGEARNLDMVDELVKEM 214
Query: 183 PDLVNEK---TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV 239
+K T+ IL++ Y A + + + VF++ ++ G
Sbjct: 215 EKHACDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSG--------------------- 253
Query: 240 EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
F D NI++ C+ G A F+K++++ TY +
Sbjct: 254 -------------FELDAAAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLL 300
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ + K K+ + M + ++ + C +I EALE++RE+KN+
Sbjct: 301 DCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMC 360
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
+ + L+K LC+ RM E +D M+++ L + + ++ + +V L
Sbjct: 361 LDAKYFEILVKGLCRANRMVDALEIVDIMKRRK---LDDSNVYGIIISGYLRQNDVSKAL 417
Query: 420 ERME---RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
E+ E ++G TY I++ +K + + EM + G+ PD + T ++ G
Sbjct: 418 EQFEIIKKSGRPPRVSTYTEIMQQLFKLKQFEKGCNLFSEMIESGIEPDSVAITAVVAGH 477
Query: 477 YDKGRLEDALSYFHEMRLKGMVP 499
+ R+ +A F M KG+ P
Sbjct: 478 LGQNRVAEAWKVFGSMEEKGIKP 500
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 125/304 (41%), Gaps = 19/304 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGILL 195
A F+K + +G + G + +LD + ++ + + + D+M ++ +G LL
Sbjct: 277 ALEFYKEMMEKG-ITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLL 335
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+ + ++EA+ + K D F+ L+ LCR + A + K
Sbjct: 336 KSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD 395
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D II++G+ +V +A ++ I KS P TY + L K + LF
Sbjct: 396 DSNVYGIIISGYLRQNDVSKALEQFEIIKKSGRPPRVSTYTEIMQQLFKLKQFEKGCNLF 455
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M E G +PD V ++ + R+ EA +V M+ +G P +Y+ +K LC+
Sbjct: 456 SEMIESGIEPDSVAITAVVAGHLGQNRVAEAWKVFGSMEEKGIKPTWKSYSIFMKELCRS 515
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYN 435
R + + ++M + K + + WV+ ME+NG K D
Sbjct: 516 SRYDEIITLFNQM---------------HASKIAIRDDIFSWVISSMEKNGEKEKIDLIK 560
Query: 436 VILK 439
I K
Sbjct: 561 EIQK 564
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 117/289 (40%), Gaps = 41/289 (14%)
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K+ F + + N +L+ N+ K++ K C+ D T+ ++ K K+G
Sbjct: 181 KDGFSHRVGIYNTMLSIAGEARNLDMVDELVKEMEKHACDKDIRTWTILISVYGKAKKIG 240
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
L +F+ M + G + D N +I +LC R ALE +EM +G + TY L+
Sbjct: 241 KGLLVFEKMRKSGFELDAAAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLL 300
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSC-LPNEITFNYLLKSLKKPEEVPWVLERME----- 423
+ K ++++ V D+M + C + F YLLKS ++ LE +
Sbjct: 301 DCIAKSEKVDVVQSIADDMVR---ICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNK 357
Query: 424 -------------RNGCKMS-------------------TDTYNVILKLYVNWDCEDKVR 451
+ C+ + ++ Y +I+ Y+ + K
Sbjct: 358 EMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKAL 417
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+E ++K G P +YT ++ L+ + E + F EM G+ P+
Sbjct: 418 EQFEIIKKSGRPPRVSTYTEIMQQLFKLKQFEKGCNLFSEMIESGIEPD 466
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 99/247 (40%), Gaps = 37/247 (14%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK--RIPEALEVLR 351
T+A + + G A+R F+ M + G P T C+I LC KK + EA + R
Sbjct: 713 TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATKTFR 772
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKI-------------------------------KRMET 380
EM G +P+ + LC++ R+
Sbjct: 773 EMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVPVAYSIYIRALSRIGK 832
Query: 381 VYEYLDEMEQKNGS-CLPNEITFNYLLKSLKKPEEVPWVLER---MERNGCKMSTDTYNV 436
+ E L E+ G L ++ T+ ++ L + ++ L++ M+ G K Y
Sbjct: 833 LEEALSELASFEGDRSLLDQYTYGSIVHGLLQRGDLHKALDKVNSMKEIGIKPGVHVYTS 892
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ + +KV T +M+++ P +YT MI G G++E+A F + KG
Sbjct: 893 LIVHFFKEKQFEKVLETCHKMKEESCEPSVVTYTAMICGYMSLGKVEEAWKAFRNIEEKG 952
Query: 497 MVPEPRT 503
P+ +T
Sbjct: 953 TSPDFKT 959
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKE 216
+++ L +G+ + + F+ L+++ TYG +++ + +A+ + KE
Sbjct: 821 SIYIRALSRIGKLEEALSELASFEGDRSLLDQYTYGSIVHGLLQRGDLHKALDKVNSMKE 880
Query: 217 FGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
G + + +L++ + K E V ET + ++ + T ++ G+ LG V E
Sbjct: 881 IGIKPGVHVYTSLIVHFFKEKQFEKVLETCHKMKEESCEPSVVTYTAMICGYMSLGKVEE 940
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
A + +++I + PD TY+ F+N L + GK AL+L M +KG P +
Sbjct: 941 AWKAFRNIEEKGTSPDFKTYSKFINCLCQAGKSEDALKLLSEMLDKGIAPSTI 993
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 153/315 (48%), Gaps = 6/315 (1%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ET 244
+++ YG L++ A+ + R ++ + ++ +C+ KHV A +
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219
Query: 245 FFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
+ E ++ T + +++G+ +G + +A + +I +PD T+ V+ K
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
GK+ +F M ++G KP+VVT ++D C K + +A +L M RG P++ +
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQS 339
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ER 421
YN LI CKIK+++ EM K+ +P+ +T+N L+ L K ++ + L +
Sbjct: 340 YNILIDGFCKIKKVDEAMNLFKEMHHKH--IIPDVVTYNSLIDGLCKLGKISYALKLVDE 397
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M G TY+ IL DK +++ +G+ P+ +YT++I GL GR
Sbjct: 398 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGR 457
Query: 482 LEDALSYFHEMRLKG 496
LEDA + F ++ +KG
Sbjct: 458 LEDAHNIFEDLLVKG 472
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 136/251 (54%), Gaps = 5/251 (1%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ T NI+++G+C G + E K + ++K +P+ VTY + ++ ++ A +
Sbjct: 266 DVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSIL 325
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M ++G PD+ + N +ID C K++ EA+ + +EM ++ +P+V TYNSLI LCK+
Sbjct: 326 YTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKL 385
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTD 432
++ + +DEM + P+ IT++ +L +L K +V +L +++ G + +
Sbjct: 386 GKISYALKLVDEMHDR--GVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMY 443
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY +++ + + +E++ KG +YTVMIHG +KG ++AL+ +M
Sbjct: 444 TYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKM 503
Query: 493 RLKGMVPEPRT 503
+ +P+ T
Sbjct: 504 KDNSCIPDAVT 514
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 166/334 (49%), Gaps = 17/334 (5%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+ + + +G SP ++A++ + + I +F++M PD+ T+
Sbjct: 216 AFDLYSEMVSKG-ISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVY---TFN 271
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET-FFESEKN 251
IL++ + ++E VF + G ++ + +L+ C K V A++ + +
Sbjct: 272 ILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQR 331
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
DI++ NI+++G+C + V EA +K++ PD VTY + ++ L K GK+ A
Sbjct: 332 GVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYA 391
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L+L M ++G PD++T + I+DALC ++ +A+ +L ++K++G PN+ TY LI
Sbjct: 392 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 451
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCK 428
LCK R+E + +++ K + N T+ ++ +E +L +M+ N C
Sbjct: 452 LCKGGRLEDAHNIFEDLLVKGYNITVN--TYTVMIHGFCNKGLFDEALALLSKMKDNSCI 509
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
TY +I++ + D DK EM +G+
Sbjct: 510 PDAVTYEIIIRSLFDKDENDKAE-KLREMITRGL 542
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 7/263 (2%)
Query: 246 FESEKNEFGYDIKTMNI--ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
F+ GY T+ ++ G C+ G +++A F +++ + D V Y T ++ L
Sbjct: 114 FQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLC 173
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K G+ AL L + + +P+VV + IID +C K + +A ++ EM ++G PNV
Sbjct: 174 KVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVV 233
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLE 420
TY++LI + +++ + ++M +N P+ TFN L+ K +E V
Sbjct: 234 TYSALISGFFTVGQLKDAIDLFNKMILENIK--PDVYTFNILVDGFCKDGKMKEGKTVFA 291
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
M + G K + TY ++ Y +K + M ++G+ PD +SY ++I G
Sbjct: 292 MMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIK 351
Query: 481 RLEDALSYFHEMRLKGMVPEPRT 503
++++A++ F EM K ++P+ T
Sbjct: 352 KVDEAMNLFKEMHHKHIIPDVVT 374
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 107/245 (43%), Gaps = 33/245 (13%)
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+V +A + +++ P ++ + + +L K T L L Q M +G P
Sbjct: 56 DVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINP------ 109
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+ F + P L G PN T+ +LIK LC ++ + D +
Sbjct: 110 -----VLFHFQHPHQL--------MGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAM 156
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCED 448
+++ + L+ L K E L+ R++ N + + Y+ I ++ C+D
Sbjct: 157 GFQL--DQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTI----IDGMCKD 210
Query: 449 K----VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT- 503
K + EM KG+ P+ +Y+ +I G + G+L+DA+ F++M L+ + P+ T
Sbjct: 211 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTF 270
Query: 504 GILVN 508
ILV+
Sbjct: 271 NILVD 275
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 162/345 (46%), Gaps = 12/345 (3%)
Query: 165 VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
L A + +Q F PD V TY LLN + M+ EA + R K G
Sbjct: 223 TLADALATLSTMQGFGLSPDAV---TYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQP 279
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ L+ R ++ A ES +G+ D++T N++ G C G V EA R +
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVES-MTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDE 338
Query: 283 IIK-SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+ + S PD VTY T V+A K ALRL + M +KG KP +VT N ++ +LC +
Sbjct: 339 MERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEG 398
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
++ EAL L ++ G P+V TYN+LI CK + + +DEM K + T
Sbjct: 399 KLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKM--DTFT 456
Query: 402 FNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
N +L +L K+ E+ +L + G +Y ++ Y + W++M
Sbjct: 457 LNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMI 516
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ + P +Y +I GL RL++A+ +E+ KG+VP+ T
Sbjct: 517 ERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETT 561
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 117/486 (24%), Positives = 202/486 (41%), Gaps = 62/486 (12%)
Query: 87 GDEIAINVQNILKTCSVSTKGEIEKA------LNQCELTLTDDLIVNVINRYRFDWEAAY 140
G E + N+L + G++++A + + L D + N + F W +
Sbjct: 308 GFEPDLRTYNVL-AVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSS 366
Query: 141 TFFKWVS--REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
+ + R+ P N ++ L + + E + +++ PD++ TY
Sbjct: 367 DALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI---TYN 423
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-- 250
L++ Y A V +A + D G D +L LC+ K E AE S
Sbjct: 424 TLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQR 483
Query: 251 ----NEFGY------------------------------DIKTMNIILNGWCVLGNVYEA 276
+E Y I T N ++ G C + + EA
Sbjct: 484 GFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
++++ PD TY ++A K+G L A R M E KPDVVTCN +++
Sbjct: 544 IDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNG 603
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
LC ++ +AL++ +G +V TYN+LI+ +CK+ ++T + D+ME K
Sbjct: 604 LCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKG--LQ 661
Query: 397 PNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
P+ T+N +L +L + EE +L ++ +G K+S +LK + + K
Sbjct: 662 PDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG-KLSQSFACPLLKPSSADEADVKEHEG 720
Query: 454 WEEMEKKGMGPDQRSYTVM--IHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
E E D T M ++GL G+L++A + EM KGM + T I + +
Sbjct: 721 KPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGL 780
Query: 512 IKLKER 517
IK ++R
Sbjct: 781 IKRQKR 786
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 6/225 (2%)
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
++ +I+ + P+ T+ V+ KG L AL M G PD VT N +++A C
Sbjct: 196 FRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCR 255
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
K + EA +L MK G P TYN+L+ ++ ++ + ++ M P+
Sbjct: 256 KGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFE--PDL 313
Query: 400 ITFNYLLKSL---KKPEEVPWVLERMERNGCKMS-TDTYNVILKLYVNWDCEDKVRHTWE 455
T+N L L K +E + + MER + TYN ++ W C E
Sbjct: 314 RTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLE 373
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
EM KG+ P ++ +++ L +G+LE+AL ++ +G+ P+
Sbjct: 374 EMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPD 418
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 169/355 (47%), Gaps = 26/355 (7%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
+EG+ + +VF IL +RR ++ +Q TY +L++ + + EA
Sbjct: 568 KEGNVTEAFSVFRFIL-----SRRVLQDVQ------------TYSVLIHGLSRNGKMHEA 610
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNG 266
G+F +E G L + + +L+ C+ +V+ A E DI T NI+++G
Sbjct: 611 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDG 670
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G + AK + DI P+ VTYA V+ K A +L + M +G PD
Sbjct: 671 LCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 730
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
N I++ C +++ +AL++ +EM +G + ++N+LI+ CK +++ L+
Sbjct: 731 AFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLE 789
Query: 387 EMEQKNGSCLPNEITFNYLL----KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
EM +K +PN +T+ L+ K+ E LE ERN + TY +L Y
Sbjct: 790 EMIEKQ--FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN-VMPTAKTYTSLLHGYH 846
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
N +V +EEM KG+ PD+ +Y VMI +G + +A E+ +KGM
Sbjct: 847 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGM 901
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 177/420 (42%), Gaps = 44/420 (10%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
T D+++N + EA + + + P +NA++D R + ++ D
Sbjct: 278 TYDILINGFCMEKRSREAKLMLLEMI--DVGLKPEPITYNALIDGFMRQGDIEQAFRIKD 335
Query: 181 EMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
EM N + LLN A +E+A+ + E G D + L+ CR +
Sbjct: 336 EMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQ 395
Query: 238 HVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
++ A E E +K + + T ++I+NG C GN+ ++++ + +P++V Y
Sbjct: 396 NMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYT 455
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
T + A K+G++ + + + M E+G PDV N +I C KR+ EA L EM R
Sbjct: 456 TLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLER 515
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN-------------GSCLPNEIT-- 401
PN TY + I K ME Y +EM G C +T
Sbjct: 516 RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEA 575
Query: 402 ---FNYLL--KSLKKPEEVPWVLERMERNGCKM-----------------STDTYNVILK 439
F ++L + L+ + ++ + RNG KM + TYN ++
Sbjct: 576 FSVFRFILSRRVLQDVQTYSVLIHGLSRNG-KMHEAFGIFSELQEKGLLPNAFTYNSLIS 634
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
DK EEM KG+ PD +Y ++I GL G +E A + F ++ +G+ P
Sbjct: 635 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 694
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 179/399 (44%), Gaps = 47/399 (11%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMV 204
RE P +N+++ +A+R E EM + N TYG ++ Y+ A +
Sbjct: 478 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 537
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNII 263
E A F+ G L ++ + L+ C+ +V A + F D++T +++
Sbjct: 538 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 597
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++G G ++EA + ++ + P++ TY + ++ K+G + A +L + M KG
Sbjct: 598 IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 657
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD+VT N +ID LC I A + +++ RG PN TY +++ CK K ++
Sbjct: 658 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 717
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL----ERMERNGCKMSTDTYNVILK 439
L+EM + P+ +N +L K E+ L E +E+ ST ++N +++
Sbjct: 718 LLEEMLLR--GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA--STVSFNTLIE 773
Query: 440 LY-------------------------------VNWDCE----DKVRHTWEEMEKKGMGP 464
Y ++ +C+ + + W EM+++ + P
Sbjct: 774 GYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMP 833
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++YT ++HG ++ G + + + F EM KG+ P+ T
Sbjct: 834 TAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMT 872
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 177/383 (46%), Gaps = 32/383 (8%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVF------DEMPDLVNEKTYGILLNRYAAA 201
R + SP S +F+ ++D + VE + VF + P L++ + LL
Sbjct: 146 RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNS---LLGDLLKG 202
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF--ESEKNEF------ 253
+ VE VFD L D+ + N++ C+ +V+ A+ EK
Sbjct: 203 NKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIE 262
Query: 254 --------GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
G D+ T +I++NG+C+ EAK ++I +P+ +TY ++
Sbjct: 263 LKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFM 322
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
++G + A R+ M G + +++ N +++ +C ++ +ALE+++EM +G P+
Sbjct: 323 RQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQ 382
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLE 420
TY+ LI+ C+ + M +E LDEM+++ + P +T++ ++ L + + +L
Sbjct: 383 TYSLLIEGHCRGQNMARAFELLDEMKKRKLA--PTVLTYSVIINGLCRCGNLQGTNAILR 440
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
M NG K + Y ++ + ++ R E M ++G+ PD Y +I G
Sbjct: 441 EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAK 500
Query: 481 RLEDALSYFHEMRLKGMVPEPRT 503
R+E+A +Y EM + + P T
Sbjct: 501 RMEEARTYLMEMLERRLRPNAHT 523
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 156/376 (41%), Gaps = 35/376 (9%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+ F + +G P + +N+++ + + Q+ +EM PD+V TY
Sbjct: 610 AFGIFSELQEKG-LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIV---TYN 665
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES---- 248
IL++ A +E A +FD + G + + ++ C+ K+ A E
Sbjct: 666 ILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLR 725
Query: 249 --EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ F Y N+ILN C +A ++++++ K +V++ T + K G
Sbjct: 726 GVPPDAFIY-----NVILNFCCKEEKFEKALDLFQEMLE-KGFASTVSFNTLIEGYCKSG 779
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
KL A L + M EK P+ VT +ID C + EA + EM+ R +P TY
Sbjct: 780 KLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYT 839
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF----------NYLLKSLKKPEEVP 416
SL+ I M V +EM K P+++T+ ++++ K +E+
Sbjct: 840 SLLHGYHNIGNMSEVSALFEEMVAKGIE--PDKMTYYVMIDAYCREGNVMEACKLKDEI- 896
Query: 417 WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
V ++G ++ T +VI + + D+ M K G + S ++ G
Sbjct: 897 LVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGN 956
Query: 477 YDKGRLEDALSYFHEM 492
+ ED+ + +M
Sbjct: 957 QNGANSEDSDNLLKQM 972
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 181/405 (44%), Gaps = 19/405 (4%)
Query: 97 ILKTCSVSTKGEIEKALNQ--CELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR--EGDY 152
IL C + E EK L + + + D+++ + F T KW
Sbjct: 335 ILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKI 394
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + ++ G+ + +E +F EM PD E TY L++ Y A +
Sbjct: 395 SPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD---EVTYTTLIDVYCKAGEMVN 451
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A + + + G ++ + L+ LC++ ++ A E E K ++ N ++N
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVN 511
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C GN+ +A + K++ + +PD++TY T ++A + G + A +L Q M ++G +P
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
VVT N +++ C + + +L M +G +P+ TYN+L+K C M T +
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY 631
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PWVL-ERMERNGCKMSTDTYNVILKLYV 442
M +N P+ T+N L+K K + W L + M G + +YN ++K +
Sbjct: 632 KRM--RNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFY 689
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ R +EEM G+ D Y + Y++G +E L+
Sbjct: 690 KKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLN 734
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 155/339 (45%), Gaps = 9/339 (2%)
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
A R + + PD+V +Y +++ Y +++A+ + D + G + + +
Sbjct: 277 AHRLLMQMDFRSSTPDVV---SYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNS 333
Query: 229 LLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
++L LC+ K E + E + D +++G+ LG+V A +++ +++ K
Sbjct: 334 IILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK 393
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
PD +TY T + + GK+ LF M +G KPD VT +ID C + A
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+ EM G PN+ TY +LI LCK ++T E LDEM +K N +N ++
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL--NVCIYNSMVN 511
Query: 408 SLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
+ K E+ +++ ME G TY ++ Y DK +EM +G+ P
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ V+++G G LED M KG+VP+ T
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAIT 610
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 120/251 (47%), Gaps = 7/251 (2%)
Query: 252 EFG--YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
E+G ++ + NII+ C LG V EA R + PD V+Y+T ++ G+L
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL+L M KG KP+ T N II LC + EA +VLREM ++ +P+ Y +LI
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PW-VLERMERNG 426
K+ + T ++ DEM K S P+ IT+ L++ + +V P + M G
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKIS--PDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
K TY ++ +Y EM + GM P+ +Y +I GL G L+ A
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488
Query: 487 SYFHEMRLKGM 497
EMR KG+
Sbjct: 489 ELLDEMRKKGL 499
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 168/355 (47%), Gaps = 20/355 (5%)
Query: 163 LDVLGRARRFVEL----IQVFDEMPDLVNEKTYGILLNRYAAAHMVEE-AIGVF-DRRKE 216
LD+ R R +L + +F + +T+ IL R+AA+ + A+ +F +
Sbjct: 97 LDLSARLRHPRQLTNSILALFPRLRLPFTPRTFPILFERFAASQRRPDIAVRLFLSLHRS 156
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEA 276
+ DL F +LL L + +H A + + + F D+ T N + +GWC + A
Sbjct: 157 HRVVQDLPLFNSLLDALGKSRHASKAASLVRALERRFPPDVVTYNTLADGWCRAKDTSRA 216
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR-----KPDVVTCN 331
+ + +S P TY + + G++ A F M ++G KPD+V+
Sbjct: 217 LDLLRQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYT 276
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
II L ++ +A ++ EM GC P+V TYN+LI+ +CK +E D+M +K
Sbjct: 277 TIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRK 336
Query: 392 NGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
+ +PN +T+ L++ L K + ++ERM+ GC+ TYNV+++ +
Sbjct: 337 D--YMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIE 394
Query: 449 KVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLED---ALSYFHEMRLKGMVP 499
K +E M K + P+Q +Y ++I ++ + R ED A EM +G +P
Sbjct: 395 KALCLFERMSKGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVMEMVERGYLP 449
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 22/286 (7%)
Query: 158 VFNAILDVLGRAR---RFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+FN++LD LG++R + L++ + PD+V TY L + + A A+ +
Sbjct: 165 LFNSLLDALGKSRHASKAASLVRALERRFPPDVV---TYNTLADGWCRAKDTSRALDLLR 221
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG------YDIKTMNIILNG 266
+ E G + + +L R ++ A FF K DI + I++G
Sbjct: 222 QMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHG 281
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
V G + +A++ + ++ K C P TY + + KKG + A+ +F M K P+
Sbjct: 282 LGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPN 341
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT +I LC +I A++++ MK GC P V TYN LI++ + +E +
Sbjct: 342 VVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFE 401
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVP----WVLERMERN 425
M K CLPN+ T+N ++ ++ K+ E++ V+E +ER
Sbjct: 402 RMS-KGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVMEMVERG 446
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 122/239 (51%), Gaps = 15/239 (6%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D + + ++AL K A L +A+ E+ PDVVT N + D C K AL++L
Sbjct: 162 DLPLFNSLLDALGKSRHASKAASLVRAL-ERRFPPDVVTYNTLADGWCRAKDTSRALDLL 220
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ---KNGSCLPNEITFNYLLK 407
R+M G P TTYN ++K + +++ + + +M++ K+ SC P+ +++ ++
Sbjct: 221 RQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIH 280
Query: 408 SLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYV-NWDCEDKVRHTWEEMEKKGMG 463
L + ++ + + M + GC S TYN ++++ + ED V +++M +K
Sbjct: 281 GLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAV-TVFDDMVRKDYM 339
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
P+ +YTV+I GL G+++ A+ M+ +G P +V N+ ++ E+G+
Sbjct: 340 PNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEP------VVQTYNVLIRYSFEEGE 392
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 187/427 (43%), Gaps = 83/427 (19%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----------PDLVNEKTYGILLNR 197
RE P FN+ + L + + +E ++F +M P+++ TY ++L
Sbjct: 244 REDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVI---TYKLMLMG 300
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR---------------------- 235
+ M+EEA + D K +L ++ LL L R
Sbjct: 301 FCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPD 360
Query: 236 -YKHVEVAETFFESE-------------KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
Y + V + ++ +N D T + +L+G+C G V+EA
Sbjct: 361 IYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLH 420
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
++I + C P++ T +++L K+G++ A L Q M EKG D VTCN II+ALC
Sbjct: 421 EMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNG 480
Query: 342 RIPEALEVLREMKNRG-----------------------CLPNVTTYNSLIKHLCKIKRM 378
++ +A+E++ M G C P++ TY+++I LCK R+
Sbjct: 481 QLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRL 540
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYN 435
+ + EM K P+ ++ + S + ++ VL+ ME+ GC + TYN
Sbjct: 541 DDAKKKFIEMMSK--GLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYN 598
Query: 436 VILKLYVNWDCEDKVRHTW---EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
L + ++++ + +EM +KG+ PD +Y M++ L + GR+ DA S EM
Sbjct: 599 ---SLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEM 655
Query: 493 RLKGMVP 499
KG+ P
Sbjct: 656 LQKGISP 662
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 161/355 (45%), Gaps = 13/355 (3%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
SP + FN ++ +L + + ++FD+MP NE T+GIL+ Y A + + +
Sbjct: 144 SPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLE 203
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWC 268
+ + + G L + + L+ C+ AE + + + ++T N ++ C
Sbjct: 204 LLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALC 263
Query: 269 VLGNVYEAKRFWKDIIKSK----CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G + EA R ++D+ + P+ +TY + K+G L A L M
Sbjct: 264 GSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANF 323
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
++ + N + L ++ EA VL+EM G P++ +YN ++ LCK M +
Sbjct: 324 INLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCK-NGMLSDARM 382
Query: 385 LDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
L + +NG LP+ +T++ LL S K E +L M N C +T T NV+L
Sbjct: 383 LMGLMIRNG-ILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSL 441
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ + ++M +KG G D + ++I+ L + G+L+ A+ + M G
Sbjct: 442 WKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHG 496
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 126/292 (43%), Gaps = 20/292 (6%)
Query: 225 AFQNLLLWLCRYKHVEVAETFFES------EKNEFGYDIKTMNIILNGWCVLGNVYEAKR 278
F L+ LC H+E A F+ E NEF T I++ G+C G +
Sbjct: 149 TFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEF-----TFGILVRGYCRAGLASKGLE 203
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
+ P++V Y T +++ K+GK A +L M E G P V T N I ALC
Sbjct: 204 LLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALC 263
Query: 339 FKKRIPEALEVLREMKNRGCL----PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+I EA + R+M+ L PNV TY ++ CK +E +D M K +
Sbjct: 264 GSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTM--KRNA 321
Query: 395 CLPNEITFNYLLKSLKKPEEV--PW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
N ++N L L + ++ W VL+ M G + +YN+++ R
Sbjct: 322 NFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDAR 381
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
M + G+ PD +Y+ ++HG KG++ +A + HEM P T
Sbjct: 382 MLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYT 433
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 160/366 (43%), Gaps = 26/366 (7%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYG-------ILLNRYAAAHMVE 205
SP + N +L L + R E + +M NEK YG I++N ++
Sbjct: 428 SPNTYTCNVLLHSLWKEGRISEAENLLQKM----NEKGYGVDTVTCNIIINALCNNGQLD 483
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILN 265
+AI + + G +A NL + + + +K D+ T + I++
Sbjct: 484 KAIEIVNGMWTHGS----AALGNL-----GNSFIGLVDDTISGKKCT--PDLVTYSTIIS 532
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G + +AK+ + +++ +PDS Y TF+++ ++GK+ +A ++ + M ++G
Sbjct: 533 GLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNK 592
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ T N +I L K +I E ++ EM+ +G P+V TYN ++ LC+ R+ L
Sbjct: 593 TLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVL 652
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME--RNGCKMSTDTYNVILKLYVN 443
DEM QK S PN +F L+K+ K + E E N C Y ++ +
Sbjct: 653 DEMLQKGIS--PNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLV 710
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + +E + Y +I L +LE A H + KG +P +
Sbjct: 711 GGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPAS 770
Query: 504 GILVND 509
+ V D
Sbjct: 771 FMPVID 776
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 144/356 (40%), Gaps = 67/356 (18%)
Query: 210 VFDRRKEFGELDDLSAF--------------QNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+ R K F ELDDL +NL+ L + A + F+S ++ F
Sbjct: 48 ILIRSKMFNELDDLHQLLLNSPSLESSDSSLENLVTVLAKSGFFNKAISHFKSLRSNFPE 107
Query: 256 ---DIKTMNIILNGWCVLGNVYE-AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
I N++L C+ N E +KD++ ++ P++ T+ + L G L A
Sbjct: 108 KQPSIYLYNVLLKS-CIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDA 166
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
LF M +G +P+ T ++ C + LE+L +M+ G LPN YN+LI
Sbjct: 167 RELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISS 226
Query: 372 LCKIKRMETVYEYLDEMEQKN-------------------------------------GS 394
CK + + +D+M + G
Sbjct: 227 FCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGL 286
Query: 395 CLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNV-ILKLYVNWDCEDKV 450
PN IT+ +L K EE +++ M+RN ++ ++YN+ +L L N K+
Sbjct: 287 PHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRN----GKL 342
Query: 451 RHTW---EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
W +EM G+ PD SY +++ GL G L DA M G++P+ T
Sbjct: 343 LEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVT 398
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 108/276 (39%), Gaps = 8/276 (2%)
Query: 117 ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI 176
+L +I + R D +A F + +S+ P S +++ + R +
Sbjct: 523 DLVTYSTIISGLCKAGRLD-DAKKKFIEMMSK--GLQPDSAIYDTFIHSFCREGKISSAF 579
Query: 177 QVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
QV +M KT Y L+ + + + E G+ D +E G D+ + ++L L
Sbjct: 580 QVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCL 639
Query: 234 CRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
C + A + E + +I + I++ +C + ++A +I + C
Sbjct: 640 CEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACD-FKASHEVFEIALNVCGHKE 698
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
Y N L GK+ A LF+ ++ +ID LC +++ A +VL
Sbjct: 699 ALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHR 758
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+ ++G + ++ +I K+ E + M
Sbjct: 759 LIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERM 794
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 199/450 (44%), Gaps = 38/450 (8%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS---PGSNVFNAIL- 163
E +K L +T L +I + E FFKWV R+ Y G +L
Sbjct: 55 EHDKTLKSLASHMTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLV 114
Query: 164 --DVLGRARR---------------FVELIQVFDEMPDL---VNEKTYGILLNRYAAAHM 203
D+ G A++ V+L+ D M +L ++ Y LL A +M
Sbjct: 115 SRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNM 174
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF-FESEKNEFGYDIKTMNI 262
A V+ R G + ++ ++ LC+ V+ AE F + + FG D
Sbjct: 175 GFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTS 234
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++ C ++ EA R ++ + K + C P+SVTY+ ++ L + G+L A +L Q M EK
Sbjct: 235 LVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 294
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G +P T +I A C +A+++L EM + C+PNV TY LI LC+ ++E
Sbjct: 295 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 354
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV------LERMERNGCKMSTDTYN 435
+M K+G C P ITFN L+ K WV L ME+ CK + TYN
Sbjct: 355 NGVFRKM-LKHGLC-PGIITFNALINGYCKE---GWVVSAFQLLSVMEKGNCKPNIRTYN 409
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+++ K + G+ PD+ +Y +++ G +G+L A + F+ M
Sbjct: 410 ELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSA 469
Query: 496 GMVPEPRTGILVNDMNIKLKERGEQGKKVI 525
G+ P+ T + D KL R EQ ++
Sbjct: 470 GLEPDGFTFTALIDGLCKLG-RLEQANGIL 498
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 182/426 (42%), Gaps = 44/426 (10%)
Query: 130 NRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD----- 184
N R D A+ F+ +S+E + P S ++ ++ L A R E Q+ EM +
Sbjct: 239 NCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP 298
Query: 185 ---------------------------------LVNEKTYGILLNRYAAAHMVEEAIGVF 211
+ N TY IL++R +EEA GVF
Sbjct: 299 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 358
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVL 270
+ + G + F L+ C+ V A EK +I+T N ++ G C +
Sbjct: 359 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 418
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
Y+A + ++ + PD VTY V+ K+G+L A +F +M G +PD T
Sbjct: 419 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 478
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+ID LC R+ +A +L M +G + T+ +LI CKI + + V + M +
Sbjct: 479 TALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE 538
Query: 391 KNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
CL TFN L +L K E +L +M + G S T+ ++++ +
Sbjct: 539 NR--CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 596
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
E M++ G P+ +YT++I+GL + GR+E+A + M G+ P T ++
Sbjct: 597 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 656
Query: 508 NDMNIK 513
++K
Sbjct: 657 VKAHVK 662
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 171/416 (41%), Gaps = 60/416 (14%)
Query: 128 VINRY-RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARR----FVELIQVFDE- 181
+IN Y + W + V +G+ P +N +++ L R + F+ L +V D
Sbjct: 376 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 435
Query: 182 -MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
+PD V TY IL++ + + A +F+ G D F L+ LC+ +E
Sbjct: 436 LLPDRV---TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLE 492
Query: 241 VAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
A S K D T +++G C +G + ++++++++C + T+ F+
Sbjct: 493 QANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFL 552
Query: 300 NALTKKGKLGTA-----------------------------------LRLFQAMWEKGRK 324
+AL K KL A L++ + M + G
Sbjct: 553 DALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS 612
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+V T II+ LC R+ EA +L M + G PN TY L+K K R++ ++
Sbjct: 613 PNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQI 672
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
+ M KNG C PN ++ LL +VL G + + T ++ + +
Sbjct: 673 VSTM-VKNG-CQPNSHIYSALLSG--------FVLSNTAI-GARALSSTGDLDAR---SL 718
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
E+ + KK P + Y ++ GL +GR+ +A +M G+ P+
Sbjct: 719 SSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD 774
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 164/350 (46%), Gaps = 13/350 (3%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAI 208
Y P + N ++ L + + D++ L +++ +YG L++ A+
Sbjct: 3 YHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAAL 62
Query: 209 GVFDRRKEFGELDDLSA--FQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
+ R G+L L+A + ++ +C+ KHV A + + E ++ T + +++
Sbjct: 63 DLLQRVD--GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ V+G + +A + II +PD T+ V+ K K+ +F M ++G P
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DVVT N ++D K + A + M G P++ +YN LI CKIK+++
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 240
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYV 442
+EM KN +PN +T+N L+ L K + + L+ +M G + TYN I+
Sbjct: 241 NEMHCKN--IIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALF 298
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
DK + + +G+ P +YT++I GL GRL+DA + F ++
Sbjct: 299 KTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 124/248 (50%), Gaps = 5/248 (2%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T+N ++ G C+ G +++A F ++ D V+Y T ++ L K G+ AL L Q +
Sbjct: 9 TLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRV 68
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
K + + V N +I +C K + +A ++ EM ++G PNV TY++LI + ++
Sbjct: 69 DGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKL 128
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN 435
+ + +++ +N P+ TFN L+ +K +E V M + G TYN
Sbjct: 129 KDAIDLFNKIILEN--IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYN 186
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++ Y + + + M + G+ PD RSY ++I+G +++ A++ F+EM K
Sbjct: 187 SLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCK 246
Query: 496 GMVPEPRT 503
++P T
Sbjct: 247 NIIPNVVT 254
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 37/189 (19%)
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P+ +T N +I LC K +I +A ++ G + +Y +LI LCK+
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61
Query: 382 YEYLDEMEQKNGSCLP-NEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
LD +++ +G + N + +N ++ + K + V D +++
Sbjct: 62 ---LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHV---------------NDAFDL---- 99
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ EM KG+ P+ +Y+ +I G + G+L+DA+ F+++ L+ + P+
Sbjct: 100 -------------YSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPD 146
Query: 501 PRT-GILVN 508
T ILV+
Sbjct: 147 GYTFNILVD 155
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 166/370 (44%), Gaps = 10/370 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
+ AY F + G P + ++D L +A+ VF +M D + TY
Sbjct: 220 DKAYNLFLEMMDRG-IQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNC 278
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNE 252
L++ Y + +E + + + G D + +LL +LC A F+S +
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKG 338
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
++ I+++G+ G + E ++++ PD + A KK + A+
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAM 398
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+F M ++G PDVV +IDALC R+ +A+ +M N G PN+ +NSL+ L
Sbjct: 399 HIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGL 458
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKM 429
C + + E E+ EM N P+ + FN +L +L +V +++ MER G +
Sbjct: 459 CTVDKWEKAKEFYFEM--LNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+Y ++ + D+ + + M G+ PD+ +Y ++HG GR++DA F
Sbjct: 517 GVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVF 576
Query: 490 HEMRLKGMVP 499
EM G+ P
Sbjct: 577 REMLRNGITP 586
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 145/322 (45%), Gaps = 10/322 (3%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCRYKHVEVA-- 242
VN LL A + EA+ + +R E G D+ ++ LL C K E A
Sbjct: 127 VNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALE 186
Query: 243 --ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+S+ ++ + I++NG+ G V +A + +++ +P+ VTY T ++
Sbjct: 187 LLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVID 246
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K + A +FQ M +KG KPD T NC+I + E + +L EM G P
Sbjct: 247 GLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKP 306
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPW 417
+ TY SL+ +LC R D M +K PN + L+ E+
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFLFDSMIRK--GIKPNVAIYGILIHGYATKGALSEMHD 364
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+L M NG +N+I Y D+ H + +M+++G+ PD +Y +I L
Sbjct: 365 LLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALC 424
Query: 478 DKGRLEDALSYFHEMRLKGMVP 499
GR++DA+ F++M +G+ P
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAP 446
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 162/382 (42%), Gaps = 20/382 (5%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E SP ++FN I + E + +F++M PD+VN YG L++
Sbjct: 371 ENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN---YGALIDALCKLG 427
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMN 261
V++A+ F++ G ++ F +L+ LC E A E +FE D+ N
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
IL C G V +A+R + + P ++Y T + G++ A + M
Sbjct: 488 TILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSV 547
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G KPD T N ++ C RI +A V REM G P V TY++++ L +R
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607
Query: 382 YE-YLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVI 437
E YL+ + N +N +L L K +E + + + ++ T+N++
Sbjct: 608 KELYLNMITSGKQW---NIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIM 664
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + H + + G+ PD +Y ++ L ++G LE+ F M G
Sbjct: 665 IGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGT 724
Query: 498 VPEPRTGILVNDMNIKLKERGE 519
P R ++N + +L RG+
Sbjct: 725 TPNSR---MLNALVRRLLHRGD 743
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 140/319 (43%), Gaps = 10/319 (3%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY IL+ + +E F + G + LL LC K + A
Sbjct: 96 TYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKR 155
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK---CEPDSVTYATFVNALTK 304
E G D+ + N +L G+C EA + S+ C P+ V+YA +N
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFT 215
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
+G++ A LF M ++G +P+VVT +ID LC + + A V ++M ++G P+ T
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLER 421
YN LI I + + V L+EM P+ T+ LL L + E ++ +
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLK--PDCYTYGSLLNYLCNNGRCREARFLFDS 333
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M R G K + Y +++ Y ++ M + G+ PD + ++ K
Sbjct: 334 MIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAM 393
Query: 482 LEDALSYFHEMRLKGMVPE 500
+++A+ F++M+ +G+ P+
Sbjct: 394 IDEAMHIFNKMKQQGLSPD 412
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 8/229 (3%)
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
K PD TY+ + + G+L F + + G + + + N ++ LC KR+ EA
Sbjct: 89 KVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEA 148
Query: 347 LEVL-REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG-SCLPNEITFNY 404
+++L + M GC P+V +YN+L+K C KR E E L M G SC PN +++
Sbjct: 149 MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAI 208
Query: 405 LLKSLKKPEEVP----WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
++ +V LE M+R G + + TY ++ D+ +++M K
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDR-GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
G+ PD +Y +IHG G+ ++ + EM G+ P+ T G L+N
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLN 316
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 3/210 (1%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL--LWLCRYKHVEVAET 244
+E TY LL+ Y A +++A GVF G + + +L L+ R + E E
Sbjct: 552 DEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTR-RFSEAKEL 610
Query: 245 FFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
+ + ++I NIILNG V EA + ++ + + + T+ + AL K
Sbjct: 611 YLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFK 670
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
G+ A+ LF + G PDV T I + L + + E ++ M+ G PN
Sbjct: 671 SGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRM 730
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
N+L++ L + YL ++++KN S
Sbjct: 731 LNALVRRLLHRGDITRAGAYLCKLDEKNFS 760
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 21/230 (9%)
Query: 299 VNALTKKGKLGT--ALRLFQAMWEKGRKPDVVTCNCIIDALC---FKKRIPEALEVLREM 353
+ + + G LG AL+LF + R V+ N ++ A+ ++ E++ +
Sbjct: 19 IGSRARSGSLGLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSL 78
Query: 354 KNR-------GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
NR P+ TY+ LI C++ R+E + + + N I N LL
Sbjct: 79 FNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRV--NNIVINQLL 136
Query: 407 KSL----KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK---VRHTWEEMEK 459
K L + E + +++RM GC +YN +LK + N ++ + H + +
Sbjct: 137 KGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQG 196
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
+ P+ SY ++I+G + +G+++ A + F EM +G+ P T V D
Sbjct: 197 RSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVID 246
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 89/241 (36%), Gaps = 42/241 (17%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK-----TYGI 193
AY F+ + R G +PG ++ IL L RRF E +++ M + + K Y I
Sbjct: 572 AYGVFREMLRNG-ITPGVVTYSTILHGLFTTRRFSEAKELYLNM--ITSGKQWNIWIYNI 628
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
+LN + + V+EA +F LC +F
Sbjct: 629 ILNGLSKNNCVDEAFKLFQS-------------------LC---------------SKDF 654
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
+I T NI++ G +A + I PD TY L ++G L
Sbjct: 655 QLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDD 714
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
LF AM + G P+ N ++ L + I A L ++ + +T LI L
Sbjct: 715 LFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLS 774
Query: 374 K 374
+
Sbjct: 775 R 775
>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 181/381 (47%), Gaps = 17/381 (4%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
T + IV++I + +A TF +W S+ +++ + + A++ L RRF + + D
Sbjct: 14 THERIVHLILDQKSAPQALQTF-EWASKLPNFTHSQSTYRALIHKLLTFRRFHTVQHLLD 72
Query: 181 EMPDLV----NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
EMP + +E + ++ A M+ + I V D +G+ L F ++L L +
Sbjct: 73 EMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDLVTRYGKNPSLKIFNSILDVLVK- 131
Query: 237 KHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ +++A F+ + G D T I++ G C+ + E + + I +P+ V
Sbjct: 132 EDIDLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVI 191
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y T ++AL GK+G A L + E P+ VT N +I C + +AL +L +
Sbjct: 192 YNTLLHALCNNGKVGRARSLMNEIKE----PNDVTFNVLICGYCKEDNFVQALVLLEKSF 247
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
+ G +P+V T +++ LC + R+ E L+ +E K G + + + N L+K K +
Sbjct: 248 SLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGG--VVDVVAHNTLIKGFCKFGK 305
Query: 415 VPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
V +L+ MER GC + DTYN ++ + + + +M+ G+ + ++
Sbjct: 306 VKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDT 365
Query: 472 MIHGLYDKGRLEDALSYFHEM 492
+I GL+ +GR ED M
Sbjct: 366 LIKGLFSRGRTEDGFKILELM 386
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 155/390 (39%), Gaps = 50/390 (12%)
Query: 154 PGSNVFNAILDVL------GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P ++N +L L GRAR + I+ N+ T+ +L+ Y +A
Sbjct: 187 PNVVIYNTLLHALCNNGKVGRARSLMNEIKE-------PNDVTFNVLICGYCKEDNFVQA 239
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNG 266
+ + ++ G + D+ ++ LC V A E +++ G D+ N ++ G
Sbjct: 240 LVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKG 299
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C G V K++ + C P++ TY ++ + G L +AL +F M G +
Sbjct: 300 FCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCN 359
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMK-NRG-CLPNVTTYNSLIKHLCKIKRMETVYEY 384
VT + +I L + R + ++L M+ RG C +++ YNS++ L + + E+
Sbjct: 360 FVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEF 419
Query: 385 LDEMEQ-------------------------------KNGSCLPNEITFNYLLKSLKKPE 413
L +ME N +P+ + ++ L+ +
Sbjct: 420 LMKMENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEG 479
Query: 414 EVPWVLERMERN---GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
V LE M G T+N ++ + + E+M +G PD SY+
Sbjct: 480 CVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYS 539
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+I L K + A S +M G+ P+
Sbjct: 540 PLIDALCRKKSFQKAASLLLQMVENGITPD 569
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 34/283 (12%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRY 198
+ K + R+G P ++ +NA++ + + +F++M KT GI N
Sbjct: 309 GHGLLKEMERKGCL-PNADTYNALISGFCESGMLESALDMFNDM------KTDGINCNFV 361
Query: 199 AAAHMVEEAIGVFDR-RKEFG----EL---------DDLSAFQNLLLWLCRYKHVEVAET 244
+++ G+F R R E G EL +S + ++L L R + A
Sbjct: 362 TFDTLIK---GLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALE 418
Query: 245 FFESEKNEFGYDI-KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
F +N F + +++ I+ G+C G + EAKR + + P ++ Y ++
Sbjct: 419 FLMKMENLFPRAVDRSLRIL--GFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFC 476
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
++G + AL L M G P T N +I C + AL++L +M RGC+P+
Sbjct: 477 QEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTG 536
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
+Y+ LI LC+ K + L +M + N IT +YL+
Sbjct: 537 SYSPLIDALCRKKSFQKAASLLLQMVE-------NGITPDYLI 572
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 141/369 (38%), Gaps = 52/369 (14%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVN-EKTYGILLNRYAAAHMVEE 206
P FN ++ + FV+ + + ++ +PD+V K IL N V E
Sbjct: 218 PNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCN----VGRVTE 273
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
A+ + +R + G + D+ A L+ C++ V++ E E+ + T N +++
Sbjct: 274 AVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALIS 333
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE-KG-- 322
G+C G + A + D+ + VT+ T + L +G+ ++ + M E +G
Sbjct: 334 GFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVC 393
Query: 323 ---------------RK-----------------PDVVTCNCIIDALCFKKRIPEALEVL 350
RK P V + I C + I EA V
Sbjct: 394 GGSISPYNSVLYGLYRKNMLNEALEFLMKMENLFPRAVDRSLRILGFCEEGAIQEAKRVY 453
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS-- 408
+M N G +P+ Y+ LI C+ + E ++EM P TFN L+
Sbjct: 454 DQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFL--GYFPVASTFNALISGFC 511
Query: 409 -LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
L K +LE M GC T +Y+ ++ K +M + G+ PD
Sbjct: 512 RLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGITPDYL 571
Query: 468 SYTVMIHGL 476
+ + H L
Sbjct: 572 IWNSLFHCL 580
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 11/228 (4%)
Query: 116 CELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS-NVFNAILDVLGRARRFVE 174
C D LI + +R R E + + + GS + +N++L L R E
Sbjct: 358 CNFVTFDTLIKGLFSRGR--TEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNE 415
Query: 175 LIQVFDEMPDLVN---EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
++ +M +L +++ IL + ++EA V+D+ G + + L+
Sbjct: 416 ALEFLMKMENLFPRAVDRSLRIL--GFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIH 473
Query: 232 WLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
C+ V A +E GY T N +++G+C LG A + +D++ C
Sbjct: 474 GFCQEGCVREALELM-NEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCV 532
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
PD+ +Y+ ++AL +K A L M E G PD + N + L
Sbjct: 533 PDTGSYSPLIDALCRKKSFQKAASLLLQMVENGITPDYLIWNSLFHCL 580
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 177/397 (44%), Gaps = 41/397 (10%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A F + R+G SP F ++ L ++ R + +FD MP + + TY ++
Sbjct: 272 ALVLFLMMKRDG-CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
Y+ + +A+ + + ++ G D + L+ LC K E E + K F
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTP 390
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
+ T ++NG+C+ +A R ++ SKC+ D + +N+L KK +L A L
Sbjct: 391 TVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL 450
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ G P+V+T IID C ++ ALEVL+ M+ GC PN TYNSL+ L K
Sbjct: 451 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKD 510
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTD 432
K++ L +M QK+G +PN IT+ LL+ + + E ME+NG K
Sbjct: 511 KKLHKAMALLTKM-QKDG-IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 568
Query: 433 TYNV------------------------ILKLYVN--WDCEDKVRHT------WEEMEKK 460
Y V + K+Y D K +T E M +
Sbjct: 569 AYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDE 628
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
G PD +Y+V++H L + RL +AL +M L+G+
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 160/389 (41%), Gaps = 30/389 (7%)
Query: 122 DDLIVNVINRYRF--------DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV 173
D +I NVI D++ A+ F+ + + G P + + + D L +A R
Sbjct: 526 DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG-LKPDEHAYAVLTDALCKAGRAE 584
Query: 174 ELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
E + + Y L++ ++ A + A + +R + G D + LL L
Sbjct: 585 EAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHAL 644
Query: 234 CRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
C+ K + A + I I+++ G AKR + ++ S +P +
Sbjct: 645 CKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSA 704
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
TY F+N+ K+G+L A L M +G PDVVT N +ID I A L+
Sbjct: 705 TTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKR 764
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
M C PN TY L+KHL K L + + S + N I
Sbjct: 765 MVGASCEPNYWTYCLLLKHLLKGN--------LAYVRSVDTSGMWNLIEL---------- 806
Query: 413 EEVPW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
++ W +LERM ++G + TY+ ++ + ++ + M KG+ P++ YT+
Sbjct: 807 -DITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+I D E ALS+ M G P+
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQ 894
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 8/226 (3%)
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
R + +++ PD+VTY T + + K+G L TA R F+ + E G +P+ TCN ++
Sbjct: 169 RVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGY 228
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM-ETVYEYLDEMEQKNGSCL 396
C + +A + M GC N +Y LI+ LC+ K + E + +L M +++G C
Sbjct: 229 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFL--MMKRDG-CS 285
Query: 397 PNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
PN F +L+ L K V + + M +NG S TYN ++ Y +
Sbjct: 286 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI 345
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
E MEK G PD +Y +I+GL D+ + E+A + +G P
Sbjct: 346 KELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTP 390
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 163/391 (41%), Gaps = 33/391 (8%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARR-------FVELIQVFDEMPDL------ 185
A FF+W++R + ++ A+L +L R R V ++ D D+
Sbjct: 73 ALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADA 132
Query: 186 -------------VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
++ K Y L A M E V+ + + G L D + ++
Sbjct: 133 IQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKS 192
Query: 233 LCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
C+ + A F E G + +T N ++ G+C G + +A + + C+
Sbjct: 193 YCKEGDLTTAHRCFRLLL-EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQR 251
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+ +Y + L + + AL LF M G P+V +I LC R+ +A +
Sbjct: 252 NEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL- 409
M G +P+V TYN++I K+ RM + + E+ +KNG C P++ T+N L+ L
Sbjct: 312 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALK-IKELMEKNG-CHPDDWTYNTLIYGLC 369
Query: 410 -KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
+K EE +L + G + T+ ++ Y + D +M D +
Sbjct: 370 DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +I+ L K RL++A +E+ G+VP
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVP 460
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 146/344 (42%), Gaps = 21/344 (6%)
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
R + +L+Q +PD V TY ++ Y + A F E G +
Sbjct: 168 GRVYSQLVQD-GLLPDTV---TYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNA 223
Query: 229 LLLWLCRYKHVEVAETFF------ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
L+L CR + A F ++NE+ Y I++ G C V EA +
Sbjct: 224 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSY-----TILIQGLCEAKCVREALVLFLM 278
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ + C P+ + ++ L K G++G A LF AM + G P V+T N +I R
Sbjct: 279 MKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGR 338
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ +AL++ M+ GC P+ TYN+LI LC ++ E E L+ ++ + P +TF
Sbjct: 339 MNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFT--PTVVTF 395
Query: 403 NYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
L+ E+ L +M + CK+ + ++ + D + + E+
Sbjct: 396 TNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISA 455
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G+ P+ +YT +I G G+++ AL M G P T
Sbjct: 456 NGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWT 499
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 143/284 (50%), Gaps = 12/284 (4%)
Query: 226 FQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ ++ C+ V+ A E E ++ D+ + ++ G C G + EA +K +
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM- 60
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK-----GRKPDVVTCNCIIDALCF 339
+C P+ +TY T VN L K ++ L LF M ++ G +PDV++ + +IDALC
Sbjct: 61 GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+R+ +A E + M+ GC PNV TY+SLI LCK+ R++ Y L M+ K +P
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLL--MQLKGEDMVPRA 178
Query: 400 ITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
+ +N ++ K KP E +L M+ G ++ +N +L D ++K +E
Sbjct: 179 MYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFER 238
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ K G P+ +Y V +HGL G++++A EM + P+
Sbjct: 239 LLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPD 282
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 150/321 (46%), Gaps = 10/321 (3%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y ++N + A V++A + D KE G D+ L+ LCR ++ A F+S
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK-----SKCEPDSVTYATFVNALTKK 305
E ++ T N ++NG C + E + D+ K CEPD ++Y+T ++AL K
Sbjct: 62 EECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKA 121
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
++ A F+ M G P+VVT + +ID LC R+ EA +L ++K +P Y
Sbjct: 122 QRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYY 181
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLERM 422
N+++ + + E L M++K N I FN +L +L K +E ER+
Sbjct: 182 NAVVNGFKRQGKPSECLELLLHMKEKGFGI--NIIDFNAMLHALWKNDEQEKACQFFERL 239
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
++G K + TYNV + D+ EM + + PD +Y+ +I G GR+
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
+ A F M + +P P T
Sbjct: 300 DKADDVFTRMMVHECIPHPVT 320
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 178/395 (45%), Gaps = 37/395 (9%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI-LLNR 197
AY+ + E D P + +NA+++ R + E +++ M EK +GI +++
Sbjct: 162 AYSLLMQLKGE-DMVPRAMYYNAVVNGFKRQGKPSECLELLLHM----KEKGFGINIIDF 216
Query: 198 YAAAHMV------EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEK 250
A H + E+A F+R + G+ ++ + + LC+ V+ A E +
Sbjct: 217 NAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVE 276
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
++ D+ T + I++G+C G + +A + ++ +C P VT+ T ++ ++ K
Sbjct: 277 SKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSRE 336
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A R+ + M G P + T N ++D +C + ALE+ +MK + P+ TY LI+
Sbjct: 337 AFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQ 396
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK------------------- 411
LC+ +R++ E+LD ME N +PN + L++ L K
Sbjct: 397 CLCRARRVDEAKEFLDVMEADN--VVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICK 454
Query: 412 ---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
P+E V+E+M G + TY +L+ D D +E+M +G P +
Sbjct: 455 AGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVT 514
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
YT++I +DA F M G P+ +T
Sbjct: 515 YTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQT 549
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 178/401 (44%), Gaps = 30/401 (7%)
Query: 117 ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI 176
++ L LI + + R D A FK + E SP +N +++ L +A R E +
Sbjct: 33 DVLLHSTLIQGLCRKGRIDE--ALEQFKSMGEE--CSPNVITYNTVVNGLCKANRIDEGL 88
Query: 177 QVFDEM-----------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
++FD+M PD++ +Y +++ A V++A F R + G ++
Sbjct: 89 ELFDDMEKRYEASHGCEPDVI---SYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVT 145
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGYDI--KTM--NIILNGWCVLGNVYEAKRFWK 281
+ +L+ LC+ V+ A + K E D+ + M N ++NG+ G E
Sbjct: 146 YSSLIDGLCKVDRVDEAYSLLMQLKGE---DMVPRAMYYNAVVNGFKRQGKPSECLELLL 202
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+ + + + + ++AL K + A + F+ + + G+KP+VVT N + LC
Sbjct: 203 HMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAG 262
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
++ EA +L EM P+V TY+S+I CK RM+ + M C+P+ +T
Sbjct: 263 KVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHE--CIPHPVT 320
Query: 402 FNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
F LL KK E V E M G TYNV++ D + + +M+
Sbjct: 321 FMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMK 380
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+K PD +Y +I L R+++A + M +VP
Sbjct: 381 RKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVP 421
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 13/226 (5%)
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y T +N K G++ A L M E+G K DV+ + +I LC K RI EALE + M
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK---NGSCLPNEITFNYLLKSLKK 411
C PNV TYN+++ LCK R++ E D+ME++ + C P+ I+++ ++ +L K
Sbjct: 62 EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120
Query: 412 PEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
+ V E RM GC + TY+ ++ D D+ +++ + M P
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKL 514
Y +++G +G+ + L M+ KG GI + D N L
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGF------GINIIDFNAML 220
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 94/246 (38%), Gaps = 39/246 (15%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P F +L ++ E +V ++M + + +TY +L++ A VE A+ +
Sbjct: 316 PHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEI 375
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNG---- 266
+ + K D + + L+ LCR + V+ A+ F + ++ N++ NG
Sbjct: 376 YHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDV--------MEADNVVPNGAICH 427
Query: 267 -----WCVLGNVYEAKRFWKDIIK-------------------SKCEPDSVTYATFVNAL 302
C G V EA ++++ PD TY + +L
Sbjct: 428 ALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSL 487
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
++ +A+ F+ M +G P +VT +I C +A + M G P
Sbjct: 488 CGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQA 547
Query: 363 TTYNSL 368
T +L
Sbjct: 548 QTMRTL 553
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 187/446 (41%), Gaps = 82/446 (18%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV------ 186
A+ FF + R P S+ FN +L L + + +L +++EM PDL
Sbjct: 75 AFHFFDLMMRSHPIPPISS-FNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133
Query: 187 --------------------------NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
N TY L+ H + EA +F R ++ G
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFE---SEKNEFGYDIK----TMNIILNGWCVLGNV 273
+ + L+ LC+ +V +A + ++ +++G + K T +II++G C +G
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EAK ++++ PD ++Y+T ++ GK + LF M ++G +PD+VT + +
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK-- 391
ID LC + ++ EA ++L M RG +PN+ TYNSLI C + + + E M K
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373
Query: 392 -----------NGSC--------------------LPNEITFNYLLKSL---KKPEEVPW 417
NG C PN T+ LLK L K +
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKK 433
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ M+ G ++ Y + L DC + + E++ + +Y+ +I GL
Sbjct: 434 LFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLC 493
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRT 503
G+LE A F ++ +G+ P+ T
Sbjct: 494 KAGKLETAWELFEKLSQEGLQPDVVT 519
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 173/367 (47%), Gaps = 15/367 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
PG ++ I+D L + R E ++F+EM PD++ +Y L++ + A +++
Sbjct: 235 PGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVI---SYSTLIHGFCCAGKWDQS 291
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNG 266
+FD + G D+ F L+ LC+ V A+ E + ++ T N +++G
Sbjct: 292 KHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDG 351
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C++G++ A+ + + EPD ++Y T +N K K+ A+ L+ M + G+ P+
Sbjct: 352 FCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPN 411
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V T ++ L K ++ +A ++ MK G N Y + LCK + E +
Sbjct: 412 VTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFN 471
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPE--EVPW-VLERMERNGCKMSTDTYNVILKLYVN 443
E++ N N ++ L+ L K E W + E++ + G + TYN+++ +
Sbjct: 472 ELKSYNFKL--NIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCK 529
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D +E+ME+ G PD +Y ++ G + +LE+ + H+M K + P +
Sbjct: 530 VGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAAS 589
Query: 504 GILVNDM 510
+V DM
Sbjct: 590 CTIVVDM 596
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 148/341 (43%), Gaps = 43/341 (12%)
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIIL 264
+A FD + +S+F LL L + H ++ + E D+ T++I+
Sbjct: 74 QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N C + V EA I++ P+ VTY T + L + ++ A RLF M + G
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRG------CLPNVTTYNSLIKHLCKIKRM 378
P+ VT +I LC + AL++ +EM N C P V TY+ +I LCK+ R
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253
Query: 379 ETVYEYLDEMEQK-------------NGSCL--------------------PNEITFNYL 405
+ E +EM+ + +G C P+ +TF+ L
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313
Query: 406 LKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ +L K E +LE M + G + TYN ++ + + R + M KG+
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
PD+ SYT +I+G ++++A++ ++EM G P T
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTT 414
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 114/244 (46%), Gaps = 13/244 (5%)
Query: 268 CVLGNV--YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C GN+ +A F+ +++S P ++ + L K L+ M G P
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T + + + LC R+ EAL + + RG +PNV TY +LIK LC R+
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERN---------GCKMSTDTYNV 436
M QK G C PN +T+ L+K L + V L+ + CK TY++
Sbjct: 185 LRM-QKLG-CTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSI 242
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
I+ ED+ + +EEM+ +GM PD SY+ +IHG G+ + + F EM +G
Sbjct: 243 IIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQG 302
Query: 497 MVPE 500
+ P+
Sbjct: 303 VQPD 306
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 129/266 (48%), Gaps = 8/266 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P +N+++D ++F MP +E +Y L+N Y V+EA+ +
Sbjct: 340 PNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNL 399
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWC 268
++ + G+ +++ + LL L + V A+ F K +G + I L+G C
Sbjct: 400 YNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKT-YGVSANSQIYGIFLDGLC 458
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
++EA + ++ + + Y+ ++ L K GKL TA LF+ + ++G +PDVV
Sbjct: 459 KNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVV 518
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N +I C ++ A + +M+ GC P++ YN+L+ C+ ++E V + L +M
Sbjct: 519 TYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKM 578
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEE 414
QK+ S PN + ++ L K E+
Sbjct: 579 VQKDVS--PNAASCTIVVDMLCKDEK 602
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 141/328 (42%), Gaps = 18/328 (5%)
Query: 64 IETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSV-----STKGEIEKALNQCEL 118
I + L+H + + + + + + VQ + T SV +G++ +A E+
Sbjct: 273 ISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEV 332
Query: 119 TLTDDLIVNVINRYRF--------DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRAR 170
+ ++ N+I D +A F + +G P + +++ +
Sbjct: 333 MIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKG-LEPDEISYTTLINGYCKTW 391
Query: 171 RFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
+ E + +++EM + N TYG LL V +A +F K +G + +
Sbjct: 392 KVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYG 451
Query: 228 NLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
L LC+ + E E F E + F +I+ + +++G C G + A ++ + +
Sbjct: 452 IFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQE 511
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
+PD VTY ++ K G++ A LF+ M E G PD++ N ++ C ++ E
Sbjct: 512 GLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEV 571
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+++L +M + PN + ++ LCK
Sbjct: 572 IKLLHKMVQKDVSPNAASCTIVVDMLCK 599
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 174/362 (48%), Gaps = 9/362 (2%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E + P N +++ L + + E + + D+M + N TYG +LN +
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIIL 264
A+ + + +E D + ++ LC++ ++ A F E E +I T NI++
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G+C G + + +D+IK K P+ VT++ +++ K+GKL A L + M +G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD +T +ID C + + +A +++ M ++GC PN+ T+N LI CK R++ E
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 385 LDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
+M + + + +T+N L++ L K + + M + TY ++L
Sbjct: 426 FRKMSLR--GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ +K +E++EK M D Y ++IHG+ + +++DA F + LKG+ P
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543
Query: 502 RT 503
+T
Sbjct: 544 KT 545
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 140/320 (43%), Gaps = 39/320 (12%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N T+ L+N V EA+ + DR E G DL
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI---------------------- 194
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
T+N ++NG C+ G EA +++ C+P++VTY +N + K G
Sbjct: 195 ------------TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ A+ L + M E+ K D V + IID LC + A + EM+ +G N+ TYN
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERME 423
LI C R + + L +M ++ + PN +TF+ L+ S K E + + M
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKIN--PNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G T TY ++ + + DK + M KG P+ R++ ++I+G R++
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 484 DALSYFHEMRLKGMVPEPRT 503
D L F +M L+G+V + T
Sbjct: 421 DGLELFRKMSLRGVVADTVT 440
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 138/279 (49%), Gaps = 16/279 (5%)
Query: 228 NLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
+L+L LC+ + E +++ T++I++N +C + A IIK
Sbjct: 105 DLVLALCK-----------QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 153
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
EP+++T++T +N L +G++ AL L M E G KPD++T N +++ LC + EA+
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
++ +M GC PN TY ++ +CK + E L +ME++N + + ++ ++
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL--DAVKYSIIID 271
Query: 408 SLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
L K + + ME G + TYN+++ + N D +M K+ + P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +++V+I +G+L +A EM +G+ P+ T
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 139/304 (45%), Gaps = 9/304 (2%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N T+ +L++ + + EA + G D + +L+ C+ H++ A
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 247 ESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
+ ++ G D I+T NI++NG+C + + ++ + D+VTY T + +
Sbjct: 392 DLMVSK-GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
GKL A LFQ M + P++VT ++D LC +ALE+ +++ ++
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--KKP-EEVPWVLER 421
YN +I +C +++ ++ + K P T+N ++ L K P E + +
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVK--PGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
ME +G TYN++++ ++ K EE+++ G D + ++I L D GR
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD-GR 627
Query: 482 LEDA 485
L+ +
Sbjct: 628 LKKS 631
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 156/344 (45%), Gaps = 22/344 (6%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM- 182
LI N R+D + A + R+ +P F+ ++D + + E ++ EM
Sbjct: 304 LIGGFCNAGRWD-DGAKLLRDMIKRK--INPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 183 -----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
PD + TY L++ + + +++A + D G ++ F L+ C+
Sbjct: 361 HRGIAPDTI---TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 238 HVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
++ E F + D T N ++ G+C LG + AK +++++ K P+ VTY
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
++ L G+ AL +F+ + + + D+ N II +C ++ +A ++ + +
Sbjct: 478 ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS-LKKPEEV 415
G P V TYN +I LCK + +ME+ + P+ T+N L+++ L +
Sbjct: 538 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA--PDGWTYNILIRAHLGDGDAT 595
Query: 416 PWV--LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
V +E ++R C S D + K+ ++ + +++ ++ +M
Sbjct: 596 KSVKLIEELKR--CGFSVDASTI--KMVIDMLSDGRLKKSFLDM 635
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 189/419 (45%), Gaps = 31/419 (7%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
E A+ F+ + G +P + ++D +A + FDEM + N TY
Sbjct: 305 EKAFLLFQEMKSVG-VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTA 363
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA----------- 242
LL+ Y A + +A +F+R + G + + L+ LC+ ++ A
Sbjct: 364 LLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTS 423
Query: 243 -----ETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
+ +FE + + ++ T +++G C V +A+ ++ + CEP+ + Y
Sbjct: 424 DNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYD 483
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
++ K GK+ A +F M + G P V T +IDA+ +R+ A++VL +M
Sbjct: 484 ALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVES 543
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP 416
C PNV TY ++I LC+I + + L ME+K C PN +T+ L+ L K +V
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKG--CSPNVVTYTALIDGLGKSGKVD 601
Query: 417 WVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
L+ +M GC + TY V++ D+ EM++ + Y ++
Sbjct: 602 LSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVV 661
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVP-EPRTGILVNDMNI--KLKERGEQGKKVIKLTS 529
G K +L E+ G VP P G+L+++ + +L+E E K++++L+S
Sbjct: 662 QGFSKK--FIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSS 718
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 17/324 (5%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
N TYG L++ AH V +A + D G + + L+ C+ ++ A E F
Sbjct: 443 NVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVF 502
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
K + + T +++ + A + +++S C P+ VTY ++ L +
Sbjct: 503 LRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRI 562
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G+ AL+L M EKG P+VVT +ID L ++ +L++ +M +GC PN TY
Sbjct: 563 GECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTY 622
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQK------NGSCLPNEITFNYLLKSLKKPEEVPWVL 419
LI H C ++ + L EM+Q G C + + SL +L
Sbjct: 623 RVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLG-------LL 675
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS---YTVMIHGL 476
E +E +G Y +++ + ++ +EM + + S YT +I L
Sbjct: 676 EELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQAL 735
Query: 477 YDKGRLEDALSYFHEMRLKGMVPE 500
+LE A + E+ KG+VPE
Sbjct: 736 CLASQLEKAFELYSEITRKGVVPE 759
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 130/319 (40%), Gaps = 19/319 (5%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY L+ A A ++ V E G D LC K ++ E
Sbjct: 42 TYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALC--KEGRWSDALVMIE 99
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ +F D +++G EA F + + C P+ VTY T + KK +LG
Sbjct: 100 REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLG 159
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
R+ M ++G P+ N ++ + C + P A ++L+ M + GC P YN I
Sbjct: 160 WCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFI 219
Query: 370 KHLCK---------IKRMETVYEYLDEMEQKNGSCLPNEI---TFNYLLKSLKKPEEVPW 417
+C + E VYE E SC+ N++ F L + K +
Sbjct: 220 GSICGGEELPSPDLLALAEKVYE-----EMLASSCVLNKVNTANFARCLCGMGKFDMAFQ 274
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+++ M G T TY+ ++ +K ++EM+ G+ PD +YT++I
Sbjct: 275 IIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFC 334
Query: 478 DKGRLEDALSYFHEMRLKG 496
G +E A S+F EMR G
Sbjct: 335 KAGLIEQARSWFDEMRSIG 353
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 126/295 (42%), Gaps = 21/295 (7%)
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
F D T + ++ C V +A ++++ PD TY +++ K G + A
Sbjct: 284 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQAR 343
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
F M G +VVT ++ A K++P+A ++ M + GC PN TY++L+ L
Sbjct: 344 SWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGL 403
Query: 373 CK---IKRMETVYEYLDEMEQKNG-----------SCLPNEITFNYLLKSLKKPEEV--- 415
CK I++ VY L G S PN +T+ L+ L K +V
Sbjct: 404 CKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDA 463
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
+L+ M NGC+ + Y+ ++ + D + + M K G P +YT +I
Sbjct: 464 QELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDA 523
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSL 530
++ RL+ A+ +M P T + D ++ E +K +KL S+
Sbjct: 524 MFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGE----CQKALKLLSM 574
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 21/243 (8%)
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A++ +++++ S C + V A F L GK A ++ + M KG PD T + +I
Sbjct: 237 AEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVIT 296
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
LC ++ +A + +EMK+ G P+V TY LI CK +E + DEM ++ C
Sbjct: 297 FLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEM--RSIGC 354
Query: 396 LPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLY-----VNWDCE 447
N +T+ LL + K +++P + RM GC +T TY+ ++ + CE
Sbjct: 355 SANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACE 414
Query: 448 ---------DKVRHT--WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
D V +E + P+ +Y +I GL ++ DA M G
Sbjct: 415 VYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNG 474
Query: 497 MVP 499
P
Sbjct: 475 CEP 477
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 154/385 (40%), Gaps = 74/385 (19%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + A++D L +A + V+ ++ D M P N Y L++ + ++
Sbjct: 441 APNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEP---NHIIYDALIDGFCKVGKIDN 497
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A VF R + G L + + +L+ + + + +++A + + ++ ++ T +++
Sbjct: 498 AQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMID 557
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C +G +A + + + C P+ VTY ++ L K GK+ +L+LF M KG P
Sbjct: 558 GLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAP 617
Query: 326 DVVTCNCIIDALC---------------------------------FKKRIPEALEVLRE 352
+ VT +I+ C F K+ +L +L E
Sbjct: 618 NYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEE 677
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
+++ G +P Y LI + K R+E E EM + + S IT
Sbjct: 678 LESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSL---NIT----------- 723
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
S D Y +++ +K + E+ +KG+ P+ + +
Sbjct: 724 -----------------SKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCL 766
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGM 497
I GL + +AL + + +G+
Sbjct: 767 IKGLIKVNKWNEALQLCYSICDEGV 791
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 21/255 (8%)
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C +G A + K ++ PD+ TY+ + L + K+ A LFQ M G PDV
Sbjct: 264 CGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDV 323
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T +ID+ C I +A EM++ GC NV TY +L+ K K++ + +
Sbjct: 324 YTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNR 383
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTY---------- 434
M + C PN IT++ L+ L K E+ E ++ + +D Y
Sbjct: 384 M--IDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIA 441
Query: 435 -NVIL-KLYVNWDCEDK----VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
NV+ ++ C+ + + M G P+ Y +I G G++++A
Sbjct: 442 PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501
Query: 489 FHEMRLKGMVPEPRT 503
F M G +P T
Sbjct: 502 FLRMSKCGYLPTVHT 516
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 121/309 (39%), Gaps = 51/309 (16%)
Query: 247 ESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
+ E +FGY T N ++ G + R K++ +S D T F AL K
Sbjct: 28 DPELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCK 87
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
+G+ AL + + + K D V C +I L EA+ L M+ C+PNV T
Sbjct: 88 EGRWSDALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVT 144
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLER 421
Y +L+ K K++ ++ M ++ C PN FN L+ S + P+ +L+R
Sbjct: 145 YRTLLTGFLKKKQLGWCKRIINMMMKEG--CNPNPSLFNSLVHSYCNARDYPYAYKLLKR 202
Query: 422 MERNGCKMSTDTYNVIL-------------------KLY---VNWDCE------------ 447
M GC YN+ + K+Y + C
Sbjct: 203 MADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARC 262
Query: 448 -------DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D + M KG PD +Y+ +I L + ++E A F EM+ G+ P+
Sbjct: 263 LCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPD 322
Query: 501 PRTGILVND 509
T ++ D
Sbjct: 323 VYTYTILID 331
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 123/296 (41%), Gaps = 51/296 (17%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F +S+ G Y P + + +++D + + RR ++V +M P++V TY
Sbjct: 498 AQEVFLRMSKCG-YLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVV---TYT 553
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
+++ ++A+ + +E G ++ + L+ L + V+++ + F +
Sbjct: 554 AMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTK 613
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEA--------KRFWKDIIKSKCE-------------- 289
+ T +++N C G + EA + +W ++ C
Sbjct: 614 GCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLG 673
Query: 290 -----------PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN---CIID 335
P + Y ++ +K G+L AL L + M E ++ + + +I
Sbjct: 674 LLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQ 733
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR----METVYEYLDE 387
ALC ++ +A E+ E+ +G +P ++ + LIK L K+ + ++ Y DE
Sbjct: 734 ALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDE 789
>gi|15240032|ref|NP_196258.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171850|sp|Q9FNG8.1|PP366_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial; Flags: Precursor
gi|9758420|dbj|BAB08962.1| unnamed protein product [Arabidopsis thaliana]
gi|332003627|gb|AED91010.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1030
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 183/418 (43%), Gaps = 48/418 (11%)
Query: 92 INVQNILKTCSVSTKGE-IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
++VQ I + S S E ++AL + + T +L+V V+ + A FF WV +
Sbjct: 613 MDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRN 672
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEA 207
Y S +N + V G + F ++ +F EM L+ + T+ I++ +Y + A
Sbjct: 673 GYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIA 732
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE---TFFESEKNEFGYDIKTMNIIL 264
I F K+ G + S F+ L+ LC K V E TF E ++ F D + + L
Sbjct: 733 IRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYL 792
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C +GN +AK + K P +V Y+ ++ AL + GKL AL + +
Sbjct: 793 GCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSL 851
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
D T I+ L + + +AL+ + MK G P V Y SLI + K K++E V E
Sbjct: 852 LDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLET 911
Query: 385 LDEMEQKNGSCLPNEITFNYLL---KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
+ME + SC P+ +T+ ++ SL K EE
Sbjct: 912 CQKMEGE--SCEPSVVTYTAMICGYMSLGKVEEA-------------------------- 943
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
W+ + ME++G PD ++Y+ I+ L + EDAL EM KG+ P
Sbjct: 944 --WN-------AFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP 992
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 164/397 (41%), Gaps = 43/397 (10%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E L + +++ NV+ R A FF WV ++ +S ++N +L + G
Sbjct: 142 MEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGE 201
Query: 169 ARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
AR + ++ EM +K T+ IL++ Y A + + + VF++ ++ G
Sbjct: 202 ARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSG------- 254
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
F D NI++ C+ G A F+K++++
Sbjct: 255 ---------------------------FELDATAYNIMIRSLCIAGRGDLALEFYKEMME 287
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
TY ++ + K K+ + M + ++ + C +I E
Sbjct: 288 KGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKE 347
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
ALE++RE+KN+ + + L+K LC+ RM E +D M+++ L + + +
Sbjct: 348 ALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRK---LDDSNVYGII 404
Query: 406 LKSLKKPEEVPWVLERME---RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ + +V LE+ E ++G TY I++ +K + + EM + G+
Sbjct: 405 ISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGI 464
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
PD + T ++ G + R+ +A F M KG+ P
Sbjct: 465 EPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKP 501
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 19/291 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGILL 195
A F+K + +G + G + +LD + ++ + + + D+M ++ +G LL
Sbjct: 278 ALEFYKEMMEKG-ITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLL 336
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+ + ++EA+ + K D F+ L+ LCR + A + K
Sbjct: 337 KSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD 396
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D II++G+ +V +A ++ I KS P TY + L K + LF
Sbjct: 397 DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLF 456
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M E G +PD V ++ + R+ EA +V M+ +G P +Y+ +K LC+
Sbjct: 457 NEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRS 516
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNG 426
R + + + ++M + K + + + WV+ ME+NG
Sbjct: 517 SRYDEIIKIFNQM---------------HASKIVIRDDIFSWVISSMEKNG 552
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 125/306 (40%), Gaps = 43/306 (14%)
Query: 236 YKHVEVAETFFE--SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+K +A FF +K+ F + + N +L+ N+ ++ K+ C+ D
Sbjct: 166 FKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIR 225
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ ++ K K+G L +F+ M + G + D N +I +LC R ALE +EM
Sbjct: 226 TWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEM 285
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC-LPNEITFNYLLKSLKKP 412
+G + TY L+ + K ++++ V D+M + C + F YLLKS
Sbjct: 286 MEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVR---ICEISEHDAFGYLLKSFCVS 342
Query: 413 EEVPWVLERME------------------RNGCKMS-------------------TDTYN 435
++ LE + + C+ + ++ Y
Sbjct: 343 GKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYG 402
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+I+ Y+ + K +E ++K G P +YT ++ L+ + E + F+EM
Sbjct: 403 IIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIEN 462
Query: 496 GMVPEP 501
G+ P+
Sbjct: 463 GIEPDS 468
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 43/250 (17%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK--RIPEALEVLR 351
T+A + + G A+R F+ M + G P T C+I LC KK + EA R
Sbjct: 715 TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFR 774
Query: 352 EMKNRGCLPN----------------------------------VTTYNSLIKHLCKIKR 377
EM G +P+ Y+ I+ LC+I +
Sbjct: 775 EMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGK 834
Query: 378 METVYEYLDEMEQKNGS-CLPNEITFNYLLKSLKKPEEVPWVLER---MERNGCKMSTDT 433
+E E L E+ G L ++ T+ ++ L + ++ L++ M+ G K
Sbjct: 835 LE---EALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHV 891
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y ++ + +KV T ++ME + P +YT MI G G++E+A + F M
Sbjct: 892 YTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNME 951
Query: 494 LKGMVPEPRT 503
+G P+ +T
Sbjct: 952 ERGTSPDFKT 961
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 199/450 (44%), Gaps = 38/450 (8%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS---PGSNVFNAIL- 163
E +K L +T L +I + E FFKWV R+ Y G +L
Sbjct: 32 EHDKTLKSLASHMTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLV 91
Query: 164 --DVLGRARR---------------FVELIQVFDEMPDL---VNEKTYGILLNRYAAAHM 203
D+ G A++ V+L+ D M +L ++ Y LL A +M
Sbjct: 92 SRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNM 151
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF-FESEKNEFGYDIKTMNI 262
A V+ R G + ++ ++ LC+ V+ AE F + + FG D
Sbjct: 152 GFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTS 211
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++ C ++ EA R ++ + K + C P+SVTY+ ++ L + G+L A +L Q M EK
Sbjct: 212 LVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 271
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G +P T +I A C +A+++L EM + C+PNV TY LI LC+ ++E
Sbjct: 272 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 331
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV------LERMERNGCKMSTDTYN 435
+M K+G C P ITFN L+ K WV L ME+ CK + TYN
Sbjct: 332 NGVFRKM-LKHGLC-PGIITFNALINGYCKE---GWVVSAFQLLSVMEKGNCKPNIRTYN 386
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+++ K + G+ PD+ +Y +++ G +G+L A + F+ M
Sbjct: 387 ELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSA 446
Query: 496 GMVPEPRTGILVNDMNIKLKERGEQGKKVI 525
G+ P+ T + D KL R EQ ++
Sbjct: 447 GLEPDGFTFTALIDGLCKLG-RLEQANGIL 475
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 177/416 (42%), Gaps = 44/416 (10%)
Query: 130 NRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD----- 184
N R D A+ F+ +S+E + P S ++ ++ L A R E Q+ EM +
Sbjct: 216 NCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP 275
Query: 185 ---------------------------------LVNEKTYGILLNRYAAAHMVEEAIGVF 211
+ N TY IL++R +EEA GVF
Sbjct: 276 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 335
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVL 270
+ + G + F L+ C+ V A EK +I+T N ++ G C +
Sbjct: 336 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 395
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
Y+A + ++ + PD VTY V+ K+G+L A +F +M G +PD T
Sbjct: 396 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 455
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+ID LC R+ +A +L M +G + T+ +LI CKI + + V + M +
Sbjct: 456 TALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE 515
Query: 391 KNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
CL TFN L +L K E +L +M + G S T+ ++++ +
Sbjct: 516 NR--CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 573
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
E M++ G P+ +YT++I+GL + GR+E+A + M G+ P T
Sbjct: 574 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 629
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 181/429 (42%), Gaps = 70/429 (16%)
Query: 128 VINRY-RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARR----FVELIQVFDE- 181
+IN Y + W + V +G+ P +N +++ L R + F+ L +V D
Sbjct: 353 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 412
Query: 182 -MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
+PD V TY IL++ + + A +F+ G D F L+ LC+ +E
Sbjct: 413 LLPDRV---TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLE 469
Query: 241 VAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
A S K D T +++G C +G + ++++++++C + T+ F+
Sbjct: 470 QANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFL 529
Query: 300 NALTKKGKLGTA-----------------------------------LRLFQAMWEKGRK 324
+AL K KL A L++ + M + G
Sbjct: 530 DALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS 589
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+V T II+ LC R+ EA +L M + G PN TY L+K K R++ ++
Sbjct: 590 PNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQI 649
Query: 385 LDEMEQKNGSCLPNEITFNYLL------------KSLKKPEEV-PWVLERMERNGCKMST 431
+ M KNG C PN ++ LL ++L ++ L E + +S+
Sbjct: 650 VSTM-VKNG-CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSS 707
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
+ ++ + D K+R +E++K G+ P + Y ++ GL +GR+ +A +
Sbjct: 708 HVFRLM-----DVDHALKIR---DEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQD 758
Query: 492 MRLKGMVPE 500
M G+ P+
Sbjct: 759 MVKHGLFPD 767
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 135/336 (40%), Gaps = 13/336 (3%)
Query: 159 FNAILDV---LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
F A++D +G+A+ L + E L T+ L+ + + EA + +
Sbjct: 490 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 549
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVY 274
++G + + L+ CR ++ E K ++ T II+NG C G V
Sbjct: 550 KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE 609
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA+ + P+ TYA V A K G+L A ++ M + G +P+ + ++
Sbjct: 610 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 669
Query: 335 DALCFKKRI--PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
AL ++ R N L H+ ++ ++ + DE+++
Sbjct: 670 SGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCG 729
Query: 393 GSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
+P E +N+L+ L K E + + M ++G + I++ Y D
Sbjct: 730 ---VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHG-LFPDKAISSIIEHYCKTCKYDN 785
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
+ + P SY +IHGL ++GR+++A
Sbjct: 786 CLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEA 821
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 161/363 (44%), Gaps = 23/363 (6%)
Query: 160 NAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
NA+L LGR R + ++ EM P +V T+GIL+N A ++EA+ VFDR
Sbjct: 285 NALLTWLGRGRDIKRMNELLAEMEKRKIRPSVV---TFGILVNHLCKARRIDEALQVFDR 341
Query: 214 RKEFGELD------DLSAFQNLLLWLCRYKHVEVAETFFESEK--NEFGYDIKTMNIILN 265
+ G + D+ F L+ LC+ E + E K N + T N +++
Sbjct: 342 LRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLID 401
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ GN A ++ + + +P+ +T T V+ L K G++ A+ F M KG K
Sbjct: 402 GFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKG 461
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ T +I A C I A++ EM + GC P+ Y SLI LC RM +
Sbjct: 462 NAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVV 521
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+++ S + +N L+ KK E V +L ME G K T TYN ++
Sbjct: 522 SKLKLAGFSL--DRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLG 579
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
E+M K+G+ P +Y +IH K +++ + F EM VP P
Sbjct: 580 KTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVP-PN 638
Query: 503 TGI 505
T I
Sbjct: 639 TVI 641
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 158/367 (43%), Gaps = 32/367 (8%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMP------DLVNEKTYGILLNRYAAAHMVEE 206
S + + +L VL ++ R + + V DEMP + E +G L+ R + E
Sbjct: 171 SKSPQLCHGLLRVLLKSGRAGDALHVLDEMPQANSGFSVTGEIVFGELV-RSGRSFPDGE 229
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
+G+ + E G D L+ LC + VA E + D + N +L
Sbjct: 230 VVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLT 289
Query: 266 GWCVLGNVYEAKR---FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
W LG + KR ++ K K P VT+ VN L K ++ AL++F + KG
Sbjct: 290 -W--LGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKG 346
Query: 323 R------KPDVVTCNCIIDALCFKKRIPEALEVLREMK----NRGCLPNVTTYNSLIKHL 372
+PDVV N +ID LC + + L +L EMK NR PN TYN LI
Sbjct: 347 GSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINR---PNTVTYNCLIDGF 403
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKM 429
K + +E +M ++ PN IT N L+ L K V +E M+ G K
Sbjct: 404 FKAGNFDRAHELFRQMNEEG--VQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKG 461
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ TY ++ + + ++ +EEM G PD Y +I GL GR+ DA
Sbjct: 462 NAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVV 521
Query: 490 HEMRLKG 496
+++L G
Sbjct: 522 SKLKLAG 528
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 138/321 (42%), Gaps = 43/321 (13%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV---NEKTY 191
+++ A+ F+ ++ EG P N ++D L + R ++ F+EM N TY
Sbjct: 408 NFDRAHELFRQMNEEG-VQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATY 466
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK- 250
L++ + + + A+ F+ G D + +L+ LC + A K
Sbjct: 467 TALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKL 526
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
F D N++++G+C + ++ ++ +PD++TY T ++ L K G T
Sbjct: 527 AGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFAT 586
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE------------------------- 345
A ++ + M ++G +P VVT II A C KK + E
Sbjct: 587 ASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILI 646
Query: 346 -----------ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
A+ ++ +MK + PN TTYN+++K + K + +E +D M ++ +
Sbjct: 647 DALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEE--A 704
Query: 395 CLPNEITFNYLLKSLKKPEEV 415
C P+ IT L + L E+
Sbjct: 705 CRPDYITMEVLTEWLSAVGEI 725
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 8/216 (3%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD V L K G A + + G D +CN ++ L + I E+
Sbjct: 244 PDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNEL 303
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS----CLPNEITFNYL 405
L EM+ R P+V T+ L+ HLCK +R++ + D + K GS P+ + FN L
Sbjct: 304 LAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTL 363
Query: 406 LKSL---KKPEEVPWVLERMER-NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
+ L K E+ +LE M+ N + +T TYN ++ + D+ + +M ++G
Sbjct: 364 IDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEG 423
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ P+ + ++ GL GR+ A+ +F+EM+ KG+
Sbjct: 424 VQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGL 459
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 177/397 (44%), Gaps = 41/397 (10%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A F + R+G SP F ++ L ++ R + +FD MP + + TY ++
Sbjct: 272 ALVLFLMMKRDG-CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
Y+ + +A+ + + ++ G D + L+ LC K E E + K F
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTP 390
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
+ T ++NG+C+ +A R ++ SKC+ D + +N+L KK +L A L
Sbjct: 391 TVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL 450
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ G P+V+T IID C ++ ALEVL+ M+ GC PN TYNSL+ L K
Sbjct: 451 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKD 510
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTD 432
K++ L +M QK+G +PN IT+ LL+ + + E ME+NG K
Sbjct: 511 KKLHKAMALLTKM-QKDG-IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 568
Query: 433 TYNV------------------------ILKLYVN--WDCEDKVRHT------WEEMEKK 460
Y V + K+Y D K +T E M +
Sbjct: 569 AYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDE 628
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
G PD +Y+V++H L + RL +AL +M L+G+
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 160/389 (41%), Gaps = 30/389 (7%)
Query: 122 DDLIVNVINRYRF--------DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV 173
D +I NVI D++ A+ F+ + + G P + + + D L +A R
Sbjct: 526 DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG-LKPDEHAYAVLTDALCKAGRAE 584
Query: 174 ELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
E + + Y L++ ++ A + A + +R + G D + LL L
Sbjct: 585 EAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHAL 644
Query: 234 CRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
C+ K + A + I I+++ G AKR + ++ S +P +
Sbjct: 645 CKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSA 704
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
TY F+N+ K+G+L A L M +G PDVVT N +ID I A L+
Sbjct: 705 TTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKR 764
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
M C PN TY L+KHL K L + + S + N I
Sbjct: 765 MVGASCEPNYWTYCLLLKHLLKGN--------LAYVRSVDTSGMWNLIEL---------- 806
Query: 413 EEVPW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
++ W +LERM ++G + TY+ ++ + ++ + M KG+ P++ YT+
Sbjct: 807 -DITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+I D E ALS+ M G P+
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQ 894
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 170/409 (41%), Gaps = 38/409 (9%)
Query: 126 VNVINRYRFDWEA-----AYTFFKWVSREGDYSPGSNVFNAILDVLGRARR-------FV 173
+V + +R D A A FF+W++R + ++ A+L +L R R V
Sbjct: 55 AHVADLFRADSTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVV 114
Query: 174 ELIQVFDEMPDL-------------------VNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
++ D D+ ++ K Y L A M E V+ +
Sbjct: 115 SMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQL 174
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGN 272
+ G L D + ++ C+ + A +F E G + +T N ++ G+C G
Sbjct: 175 VQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL-EGGLEPETFTCNALVLGYCRTGE 233
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+ +A + + C+ + +Y + L + AL LF M G P+V
Sbjct: 234 LRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTF 293
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+I LC R+ +A + M G +P+V TYN++I K+ RM + + E+ +KN
Sbjct: 294 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALK-IKELMEKN 352
Query: 393 GSCLPNEITFNYLLKSL--KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
G C P++ T+N L+ L +K EE +L + G + T+ ++ Y + D
Sbjct: 353 G-CHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDA 411
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+M D + + +I+ L K RL++A +E+ G+VP
Sbjct: 412 LRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVP 460
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 147/310 (47%), Gaps = 6/310 (1%)
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNE 252
+L+ +A A+ + R + G DL L+ C + + K
Sbjct: 65 ILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ D T+N ++ G C+ G V +A F ++ + + V+YAT +N + K G A+
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAI 184
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ + + + KPDVV N IIDA+C + + EA + EM +G +V TYN+LI
Sbjct: 185 KFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGF 244
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
C + +++ L+EM K + PN T+N L+ +L K +E VL M + K
Sbjct: 245 CIVGKLKEAIGLLNEMVLKTIN--PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TY+ ++ Y K +H + M G+ PD +YT++I+G +++AL+ F
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362
Query: 490 HEMRLKGMVP 499
EM K MVP
Sbjct: 363 KEMHQKNMVP 372
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 188/423 (44%), Gaps = 35/423 (8%)
Query: 85 YPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFK 144
YP D + +N ++K + KG+++KAL+ D L+ ++ + + T
Sbjct: 125 YPPDTVTLN--TLIK--GLCLKGQVKKALH-----FHDKLLAQ---GFQLNQVSYATLIN 172
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMV 204
V + GD A +F+ I PD+V Y +++ +V
Sbjct: 173 GVCKIGDTRA--------------AIKFLRKIDGRLTKPDVV---MYNTIIDAMCKYQLV 215
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
EA G+F G D+ + L+ C ++ A E ++ T NI+
Sbjct: 216 SEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNIL 275
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ C G V EAK ++K+ +PD +TY+T ++ ++ A +F AM G
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PDV T +I+ C K + EAL + +EM + +P + TY+SLI LCK R+ V++
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWD 395
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
+DEM + + IT++ L+ L K + + +M+ + + T+ ++L
Sbjct: 396 LIDEMRDRGQPA--DVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ ++++ KG + +Y VMI+G +G LE+AL+ +M G +P
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513
Query: 501 PRT 503
T
Sbjct: 514 AFT 516
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
NV +A + ++ + P + + +++ K TA+ L + KG +PD++T N
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I+ C +I VL ++ RG P+ T N+LIK LC +++ + D++ +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILKLYVNWDCED 448
N++++ L+ + K + L +++ K YN I+ +
Sbjct: 159 GFQL--NQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVS 216
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILV 507
+ + EM KG+ D +Y +I+G G+L++A+ +EM LK + P T ILV
Sbjct: 217 EAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Query: 508 NDM 510
+ +
Sbjct: 277 DAL 279
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 109/233 (46%), Gaps = 11/233 (4%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVN 187
++ + A F +S G +P + + +++ + + E + +F EM P +V
Sbjct: 318 YEVKKAQHVFNAMSLMG-VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV- 375
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
TY L++ + + + D ++ G+ D+ + +L+ LC+ H++ A F
Sbjct: 376 --TYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFN 433
Query: 248 SEKN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
K+ E +I T I+L+G C G + +A+ ++D++ + TY +N K+G
Sbjct: 434 KMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQG 493
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
L AL + M + G P+ T II AL K +A ++LR+M RG L
Sbjct: 494 LLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 164/346 (47%), Gaps = 10/346 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVF-D 212
P N +L L +A + + + +F + + T IL+N + ++++A+ +F +
Sbjct: 36 PNLRDINLLLASLCQAGKMDQAMAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHE 95
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGN 272
K F + + + + ++ C+ ++ A E E + D+ + + G+C
Sbjct: 96 MEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLE-ESSCCSSDVIAITSVARGFCKAQR 154
Query: 273 VYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
V EA + D+++ K +PD V + ++ K G++ A + + + G P+ VT
Sbjct: 155 VDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYT 214
Query: 332 CIIDALCFKKRIPEALEVLREMKNRG--CLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ID C + EAL++ + + +R PNV T+N+LI LCK R+E +E + +M+
Sbjct: 215 TLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMK 274
Query: 390 QKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
++ + T+ L+ L K EV V E M R GC S TY ++ +
Sbjct: 275 ARDLR--ADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGS 332
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ M KG+ PD +YTV++ GL++ G++ A +F ++
Sbjct: 333 LQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKI 378
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 160/359 (44%), Gaps = 14/359 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P F+ ++ L +A R E ++ +++M + + N + +LL A +++A+ +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN-EFGYDIKTMNIILNGWC 268
F + + L+ N C + ++ A E F E EKN + T I+ +C
Sbjct: 61 FRGIQCSPSVITLNILIN---GFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK-GRKPDV 327
+ + +A++ ++ S C D + + K ++ A +L M EK KPD+
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
V N II C R+ EA E+L + + GC+PN TY +LI CK + +
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNW 444
+ ++ PN +TFN L+ L K + + E +M+ + T TY ++
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+V +EEM ++G P +YT ++H G L+DA M KG+ P+ T
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTT 354
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 155/375 (41%), Gaps = 50/375 (13%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKT-YGILLNRYAAAHMVEEAI 208
SP N +++ + + +++F EM LV E T Y ++ Y +++A
Sbjct: 67 SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQAR 126
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNG 266
+ + D+ A ++ C+ + V+ A EK DI N+I++G
Sbjct: 127 QLLEESSCCS--SDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHG 184
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR--K 324
+C G V EA + ++ C P++VTY T ++ K G L AL+LF+ + + +
Sbjct: 185 FCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAE 244
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNR---------------------------- 356
P+VVT N +I LC R+ A E++++MK R
Sbjct: 245 PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304
Query: 357 -------GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
GC P+V TY +L+ CK ++ + + M K P+ T+ LL+ L
Sbjct: 305 FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIP--PDVTTYTVLLEGL 362
Query: 410 ---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K E++ R C Y+ +++ D+ + EM + + PD
Sbjct: 363 FENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDP 422
Query: 467 RSYTVMIHGLYDKGR 481
+ +++ L +GR
Sbjct: 423 ATCKLLVEMLCKRGR 437
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 4/210 (1%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DL-VNEKTYGI 193
EA F SR+ P FNA++ L +A R ++ +M DL + TY
Sbjct: 228 EALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTT 287
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNE 252
L++ E VF+ G + + L+ C+ ++ A+ S
Sbjct: 288 LMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKG 347
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D+ T ++L G G V A F++ I++ +C P +V Y+ V K + A+
Sbjct: 348 IPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAV 407
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ + M ++ PD TC +++ LC + R
Sbjct: 408 KYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 132 bits (333), Expect = 4e-28, Method: Composition-based stats.
Identities = 115/438 (26%), Positives = 196/438 (44%), Gaps = 32/438 (7%)
Query: 103 VSTKGEIEKALNQ------CELTLTD-DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPG 155
V GE+ K + + C +T T+ +V ++ + +A F++ +R+ P
Sbjct: 1126 VEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRK--CQPI 1183
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEM-------PDLVNEKTYGILLNRYAAAHMVEEAI 208
+ +N+++ +L ++ ++ Q+++EM PD V TY L++ + + AI
Sbjct: 1184 AQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTV---TYSALISAFCKLGRRDSAI 1240
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGW 267
+ + KE G + L+ ++ A + FE ++++ D+ T ++ G
Sbjct: 1241 QLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGL 1300
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
G + EA F+ ++ + C PD+V +N L K G+L A++LFQ M P V
Sbjct: 1301 GKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSV 1360
Query: 328 VTCNCIIDALC-FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VT N II AL K R E MK G P+ TY+ LI CK RME L+
Sbjct: 1361 VTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLE 1420
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVN 443
EM++K P + L+ +L K + E ++ N S Y V++K
Sbjct: 1421 EMDEKGFP--PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGK 1478
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D + ++EM K G PD +Y ++ GL G L++ALS M+ G +P+
Sbjct: 1479 AGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD--- 1535
Query: 504 GILVNDMNIKLKERGEQG 521
+N NI L + G
Sbjct: 1536 ---INSYNIILNGLAKTG 1550
Score = 124 bits (311), Expect = 1e-25, Method: Composition-based stats.
Identities = 105/439 (23%), Positives = 184/439 (41%), Gaps = 50/439 (11%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
+ EKAL L + D +V + + FF+W ++ +Y ++ + A++ L
Sbjct: 1066 DAEKALEVLMLRV-DHWLVREVMKTDVGVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLE 1124
Query: 168 RARRFVELIQVFDEMPD----LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
++ E+ ++ EM +V ++ A MV +AI +F + K
Sbjct: 1125 VVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIA 1184
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGY---DIKTMNIILNGWCVLGNVYEAKRFW 280
A+ ++++ L E + E G+ D T + +++ +C LG A +
Sbjct: 1185 QAYNSMIIMLMHEGQYEKVHQLYNEMSTE-GHCFPDTVTYSALISAFCKLGRRDSAIQLL 1243
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
++ + +P + Y + K AL LF+ M + +PDV T +I L
Sbjct: 1244 NEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKA 1303
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
RI EA EM+ GC P+ N++I L K R++ + EME C+P+ +
Sbjct: 1304 GRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLR--CIPSVV 1361
Query: 401 TFNYLLKSL----KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
T+N ++K+L + EVP ERM+ +G S+ TY++++ + + +K EE
Sbjct: 1362 TYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEE 1421
Query: 457 MEKKGMGP-----------------------------------DQRSYTVMIHGLYDKGR 481
M++KG P R Y VMI L GR
Sbjct: 1422 MDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGR 1481
Query: 482 LEDALSYFHEMRLKGMVPE 500
L+DA++ F EM G P+
Sbjct: 1482 LDDAINMFDEMNKLGCAPD 1500
Score = 97.8 bits (242), Expect = 1e-17, Method: Composition-based stats.
Identities = 86/321 (26%), Positives = 144/321 (44%), Gaps = 31/321 (9%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+ AY FF + REG P + N +++ LG+A R + +++F EM P +V T
Sbjct: 1307 DEAYHFFCEMQREG-CRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNT 1365
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
I+ + + E F+R KE G + L+ C+ +E A E E
Sbjct: 1366 --IIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLE-EM 1422
Query: 251 NEFGYDIKTMNIILNGWCVLGNVY-EAKRFWKDI-------IKSKCEPDSV-TYATFVNA 301
+E G+ +C L + +AKR+ D+ +K C S YA +
Sbjct: 1423 DEKGFPPCPA-----AYCSLIDALGKAKRY--DLACELFQELKENCGSSSARVYAVMIKH 1475
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K G+L A+ +F M + G PDV N ++ L + EAL +R M+ GC+P+
Sbjct: 1476 LGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD 1535
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWV 418
+ +YN ++ L K E L M+Q + P+ +++N +L +L EE +
Sbjct: 1536 INSYNIILNGLAKTGGPHRAMEMLSNMKQS--TVRPDVVSYNTVLGALSHAGMFEEASKL 1593
Query: 419 LERMERNGCKMSTDTYNVILK 439
++ M G + TY+ IL+
Sbjct: 1594 MKEMNTLGFEYDLITYSSILE 1614
Score = 87.8 bits (216), Expect = 1e-14, Method: Composition-based stats.
Identities = 59/229 (25%), Positives = 111/229 (48%), Gaps = 14/229 (6%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC----IIDALCFKKRIP 344
E D+ TY ++ L + G ++ Q M R P V ++ L K +
Sbjct: 1110 EHDTSTYMALIHCLEVVEQYGEMWKMIQEMV---RNPICVVTPTELSDVVRMLGNAKMVR 1166
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A+ + ++K R C P YNS+I L + E V++ +EM + G C P+ +T++
Sbjct: 1167 QAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTE-GHCFPDTVTYSA 1225
Query: 405 LLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ + L + + +L M+ G + +T Y +++ L+ ++ +EEM +
Sbjct: 1226 LISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQY 1285
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDM 510
PD +YT +I GL GR+++A +F EM+ +G P+ + +N+M
Sbjct: 1286 CRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDT---VFMNNM 1331
Score = 73.6 bits (179), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 42/242 (17%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRF---VELIQVFDEMPDLVNEKTYGILLNRYAAAHMVE 205
E + P + +++D LG+A+R+ EL Q E + + Y +++ A ++
Sbjct: 1424 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLD 1483
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILN 265
+AI +FD + G D+ A+ N +++
Sbjct: 1484 DAINMFDEMNKLGCAPDVYAY----------------------------------NALMS 1509
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G + EA + + + C PD +Y +N L K G A+ + M + +P
Sbjct: 1510 GLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRP 1569
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DVV+ N ++ AL EA ++++EM G ++ TY+S+++ + K+ +EY
Sbjct: 1570 DVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVD-----HEYT 1624
Query: 386 DE 387
D+
Sbjct: 1625 DQ 1626
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 181/405 (44%), Gaps = 19/405 (4%)
Query: 97 ILKTCSVSTKGEIEKALNQ--CELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR--EGDY 152
IL C + E EK L + + + D+++ + F T KW
Sbjct: 335 ILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKI 394
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + ++ G+ + +E +F EM PD E TY L++ Y A +
Sbjct: 395 SPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD---EVTYTTLIDVYCKAGEMVN 451
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A + + + G ++ + L+ LC++ ++ A E E K ++ N ++N
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVN 511
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C GN+ +A + K++ + +PD++TY T ++A + G + A +L Q M ++G +P
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
VVT N +++ C + + +L M +G +P+ TYN+L+K C M T +
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY 631
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PWVL-ERMERNGCKMSTDTYNVILKLYV 442
M +N P+ T+N L+K K + W L + M G + +YN ++K +
Sbjct: 632 KRM--RNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFY 689
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ R +EEM G+ D Y + Y++G +E L+
Sbjct: 690 KKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLN 734
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 155/339 (45%), Gaps = 9/339 (2%)
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
A R + + PD+V +Y +++ Y +++A+ + D + G + + +
Sbjct: 277 AHRLLMQMDFRSSTPDVV---SYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNS 333
Query: 229 LLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
++L LC+ K E + E + D +++G+ LG+V A +++ +++ K
Sbjct: 334 IILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK 393
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
PD +TY T + + GK+ LF M +G KPD VT +ID C + A
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+ EM G PN+ TY +LI LCK ++T E LDEM +K N +N ++
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL--NVCIYNSMVN 511
Query: 408 SLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
+ K E+ +++ ME G TY ++ Y DK +EM +G+ P
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ V+++G G LED M KG+VP+ T
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAIT 610
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 120/251 (47%), Gaps = 7/251 (2%)
Query: 252 EFG--YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
E+G ++ + NII+ C LG V EA R + PD V+Y+T ++ G+L
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL+L M KG KP+ T N II LC + EA +VLREM ++ +P+ Y +LI
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PW-VLERMERNG 426
K+ + T ++ DEM K S P+ IT+ L++ + +V P + M G
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKIS--PDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
K TY ++ +Y EM + GM P+ +Y +I GL G L+ A
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488
Query: 487 SYFHEMRLKGM 497
EMR KG+
Sbjct: 489 ELLDEMRKKGL 499
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 189/419 (45%), Gaps = 26/419 (6%)
Query: 116 CELTLTD-DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE 174
C +T T+ +V ++ + +A F++ +R+ P + +N+++ +L ++ +
Sbjct: 122 CVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKC--QPIAQAYNSMIIMLMHEGQYEK 179
Query: 175 LIQVFDEM-------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
+ Q+++EM PD V TY L++ + + AI + + KE G +
Sbjct: 180 VHQLYNEMSTEGHCFPDTV---TYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYT 236
Query: 228 NLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
L+ ++ A + FE ++++ D+ T ++ G G + EA F+ ++ +
Sbjct: 237 MLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQRE 296
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC-FKKRIPE 345
C PD+V +N L K G+L A++LFQ M P VVT N II AL K R E
Sbjct: 297 GCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASE 356
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
MK G P+ TY+ LI CK RME L+EM++K P + L
Sbjct: 357 VPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFP--PCPAAYCSL 414
Query: 406 LKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ +L K + E ++ N S Y V++K D + ++EM K G
Sbjct: 415 IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGC 474
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQG 521
PD +Y ++ GL G L++ALS M+ G +P+ +N NI L + G
Sbjct: 475 APDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD------INSYNIILNGLAKTG 527
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 196/470 (41%), Gaps = 63/470 (13%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
+ EKAL L + D +V + + FF+W ++ +Y ++ + A++ L
Sbjct: 43 DAEKALEVLMLRV-DHWLVREVMKTDVGVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLE 101
Query: 168 RARRFVELIQVFDEMPD----LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
++ E+ ++ EM +V ++ A MV +AI +F + K
Sbjct: 102 VVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIA 161
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGY---DIKTMNIILNGWCVLGNVYEAKRFW 280
A+ ++++ L E + E G+ D T + +++ +C LG A +
Sbjct: 162 QAYNSMIIMLMHEGQYEKVHQLYNEMSTE-GHCFPDTVTYSALISAFCKLGRRDSAIQLL 220
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
++ + +P + Y + K AL LF+ M + +PDV T +I L
Sbjct: 221 NEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKA 280
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
RI EA EM+ GC P+ N++I L K R++ + EME C+P+ +
Sbjct: 281 GRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLR--CIPSVV 338
Query: 401 TFNYLLKSL----KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
T+N ++K+L + EVP ERM+ +G S+ TY++++ + + +K EE
Sbjct: 339 TYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEE 398
Query: 457 MEKKGMGP-----------------------------------DQRSYTVMIHGLYDKGR 481
M++KG P R Y VMI L GR
Sbjct: 399 MDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGR 458
Query: 482 LEDALSYFHEMRLKGMVPE-----------PRTGILVNDMNI--KLKERG 518
L+DA++ F EM G P+ RTG+L ++ +++E G
Sbjct: 459 LDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHG 508
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 143/319 (44%), Gaps = 31/319 (9%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY FF + REG P + N +++ LG+A R + +++F EM P +V T
Sbjct: 286 AYHFFCEMQREG-CRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNT-- 342
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
I+ + + E F+R KE G + L+ C+ +E A E E +E
Sbjct: 343 IIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLE-EMDE 401
Query: 253 FGYDIKTMNIILNGWCVLGNVY-EAKRFWKDI-------IKSKCEPDSV-TYATFVNALT 303
G+ +C L + +AKR+ D+ +K C S YA + L
Sbjct: 402 KGFPPCP-----AAYCSLIDALGKAKRY--DLACELFQELKENCGSSSARVYAVMIKHLG 454
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K G+L A+ +F M + G PDV N ++ L + EAL +R M+ GC+P++
Sbjct: 455 KAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDIN 514
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLE 420
+YN ++ L K E L M+Q + P+ +++N +L +L EE +++
Sbjct: 515 SYNIILNGLAKTGGPHRAMEMLSNMKQ--STVRPDVVSYNTVLGALSHAGMFEEASKLMK 572
Query: 421 RMERNGCKMSTDTYNVILK 439
M G + TY+ IL+
Sbjct: 573 EMNTLGFEYDLITYSSILE 591
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 42/242 (17%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRF---VELIQVFDEMPDLVNEKTYGILLNRYAAAHMVE 205
E + P + +++D LG+A+R+ EL Q E + + Y +++ A ++
Sbjct: 401 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLD 460
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILN 265
+AI +FD + G D+ A+ N +++
Sbjct: 461 DAINMFDEMNKLGCAPDVYAY----------------------------------NALMS 486
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G + EA + + + C PD +Y +N L K G A+ + M + +P
Sbjct: 487 GLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRP 546
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DVV+ N ++ AL EA ++++EM G ++ TY+S+++ + K+ +EY
Sbjct: 547 DVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVD-----HEYT 601
Query: 386 DE 387
D+
Sbjct: 602 DQ 603
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 181/411 (44%), Gaps = 40/411 (9%)
Query: 117 ELTLTDDLIVNVINRYRFD--------WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
E L ++N +N F +E A+ K + R+G + P ++ + ++ L +
Sbjct: 406 EEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKG-FVPDTSTYTKVITFLCQ 464
Query: 169 ARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
A++ + +F EM PD+ TY IL++ + A ++E+A FD + G +
Sbjct: 465 AKKVEKSFLLFQEMKRAGVNPDVY---TYTILIDSFCKAGLIEQARSWFDEMRSVGCSPN 521
Query: 223 LSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWK 281
+ + LL + K + A F + Y + T + +++G C G + +A ++
Sbjct: 522 VVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYE 581
Query: 282 DIIKSK----------------CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+I + P+ VTY ++ L K K+ A L AM G +P
Sbjct: 582 KLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEP 641
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ + + +ID C +I A EV M G LP+V TY SLI + K R++ + L
Sbjct: 642 NQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 701
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYV 442
EM N SC PN +T+ ++ L K E+ +L ME GC + TY ++
Sbjct: 702 SEM--LNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLG 759
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
D +++M KG P+ +Y V+I+ G L++A EM+
Sbjct: 760 KTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMK 810
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 158/407 (38%), Gaps = 45/407 (11%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLG---RARRFVELIQVFDEMPDLVNEKTYGI 193
E FF W R+ YS ++A+ ++LG AR L++ E V + +
Sbjct: 115 ELCVRFFLWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNV 174
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV------------ 241
L+ R + +EA+ R K+FG + L+ L VE+
Sbjct: 175 LVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASG 234
Query: 242 ---------------------AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
A+ EK +F D +++G EA F
Sbjct: 235 FCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFL 294
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+ + C P+ VTY T ++ KK + G R+ M +G P+ N ++ C
Sbjct: 295 HRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNA 354
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK-----NGSC 395
A ++ M G P YN I +C + + E LD +E+ SC
Sbjct: 355 GDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNA-ELLDLVEKVYEEMLAASC 413
Query: 396 LPNEI---TFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
+ N++ F+ L + K E+ +L+ M R G T TY ++ +K
Sbjct: 414 VLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFL 473
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++EM++ G+ PD +YT++I G +E A S+F EMR G P
Sbjct: 474 LFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSP 520
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 164/375 (43%), Gaps = 34/375 (9%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM----------------------PDLVNEKTY 191
P + ++A++D L +A + +V++++ P++V TY
Sbjct: 555 PNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVV---TY 611
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEK 250
G L++ A V +A + D G + + L+ C+ ++ A E F K
Sbjct: 612 GALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTK 671
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ + T +++ G + A + +++ C P+ VTY ++ L+K G++
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEK 731
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
AL L M EKG P+VVT +ID L + +L++ ++M ++GC PN TY LI
Sbjct: 732 ALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLIN 791
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEIT-FNYLLKSL-KKPEEVPWVLERMERNGCK 428
H C ++ + LDEM+ + P + ++ ++ KK +LE ME +
Sbjct: 792 HCCAAGLLDEAHLLLDEMKHTH---WPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETV 848
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS---YTVMIHGLYDKGRLEDA 485
Y +++ + + +E+ + + S Y +I L ++E+A
Sbjct: 849 PIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEA 908
Query: 486 LSYFHEMRLKGMVPE 500
+ + EM KG+VP+
Sbjct: 909 FTLYTEMTRKGIVPD 923
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 146/366 (39%), Gaps = 35/366 (9%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
G +R + ++ P N + L++ Y A A +F+R G A
Sbjct: 322 FGWCKRIINMMMTEGCNP---NPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVA 378
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILN---------GWCVLGNVYEA 276
+ + +C + + AE EK ++ + +LN C +G +A
Sbjct: 379 YNIFIGSICGQEELPNAELLDLVEK--VYEEMLAASCVLNKVNTANFSRCLCGVGKFEKA 436
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
+ K++++ PD+ TY + L + K+ + LFQ M G PDV T +ID+
Sbjct: 437 FQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDS 496
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
C I +A EM++ GC PNV TY +L+ K K++ ++ M + +C
Sbjct: 497 FCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRM--VDAACY 554
Query: 397 PNEITFNYLLKSLKKPEEVPWVLERMER-----------------NGCKMSTD--TYNVI 437
PN +T++ L+ L K E+ E E+ + C ++ + TY +
Sbjct: 555 PNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGAL 614
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + M G P+Q Y +I G G++++A F M G
Sbjct: 615 IDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGY 674
Query: 498 VPEPRT 503
+P T
Sbjct: 675 LPSVHT 680
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 111/282 (39%), Gaps = 70/282 (24%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNA 161
+S GEIEKALN L E SP + A
Sbjct: 722 GLSKVGEIEKALNLLSLM----------------------------EEKGCSPNVVTYTA 753
Query: 162 ILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
++D LG+ + +++F +M N TY +L+N AA +++EA + D K
Sbjct: 754 LIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTH 813
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKR 278
W KH++ + +F I ++ ++
Sbjct: 814 -------------WP---KHLQGYHCAVQGFSKKF---IASLGLL--------------- 839
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN---CIID 335
+++ + P + Y +++ +K G+L TAL L + + E ++ + +I
Sbjct: 840 --EEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQ 897
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
ALC ++ EA + EM +G +P++ + SL+K L ++ +
Sbjct: 898 ALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNK 939
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 203/451 (45%), Gaps = 45/451 (9%)
Query: 86 PGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
P E+ + IL S K E L L +VN++ ++ + ++ FF W
Sbjct: 46 PFPELVSKISTILS----SPKWEHSSELCHLSPKLKPHHVVNILQTHK-NTDSVLRFFFW 100
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFV-----------------ELIQVFDEMPDLVNE 188
+SR + + F ++L+ L R R F E+ +V + ++ ++
Sbjct: 101 ISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSK 160
Query: 189 KTYG-------ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+G LL + MV+ A ++ + G L F ++ LC+ V+
Sbjct: 161 YDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQE 220
Query: 242 AETF------FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
A+ +++ N F Y ++IL G C N+ A + ++K C+P+SVTY
Sbjct: 221 AKLIMSHIFRYDAYPNAFTYT----SLIL-GHCRNHNLDLAFAMFDRMVKDGCDPNSVTY 275
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+T +N L +G+L A+ + + M +KG +P V T + +LC EA+E+L +MK
Sbjct: 276 STLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKK 335
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKP 412
RGC+PN+ T+ +LI L + + E +M +P +T+N L+ L +
Sbjct: 336 RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG--LVPTTVTYNALINQLCVEGRF 393
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
E + + M +G ST TYN I+K + K +++M K G P+ +Y +
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
I+G +G L +A+ M+ G+ P+ T
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWT 484
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 163/361 (45%), Gaps = 17/361 (4%)
Query: 154 PGSNVFNAILDVL---GR---ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P FN ++++L GR A+ + I +D P N TY L+ + H ++ A
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYP---NAFTYTSLILGHCRNHNLDLA 256
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIILN 265
+FDR + G + + L+ LC +E A E E + G + + T I L
Sbjct: 257 FAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLE-EMVQKGIEPTVYTYTIPLV 315
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G EA + K C P+ T+ ++ L++ GK A+ L+ M G P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
VT N +I+ LC + R A + + M + G LP+ TYN +IK C + ++
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
D+M + S PN IT+N L+ K +LE M+ NG K TY ++ +
Sbjct: 436 DKMLKAGSS--PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS 493
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ + M + G+ P+ +YT +I G ++ +++DAL+ F +M G +P +
Sbjct: 494 RGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553
Query: 503 T 503
T
Sbjct: 554 T 554
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 156/352 (44%), Gaps = 11/352 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P + +NA+++ L RF +F M L + +TY ++ + +++A+ +
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI 434
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCV 269
FD+ + G ++ + L+ C+ ++ A E K N D T +++G+
Sbjct: 435 FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + A + +++ P+ VTY ++ K+ AL LF M E G P T
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQT 554
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I I EA +M +G LPNV TY S I LC+ R ++ EME
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEME 614
Query: 390 QKNGSCLPNEITFNYLLKSL-----KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
++N PN T++ L+ L + E+ +L R+ GC+ + DTY ++K
Sbjct: 615 KRNY--FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGE 672
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ M+KKG+ P + Y ++ G ++E AL+ F+ M G
Sbjct: 673 GRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLG 724
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 145/355 (40%), Gaps = 44/355 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P F A++ L R +F I ++ +M P V TY L+N+ E A
Sbjct: 340 PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV---TYNALINQLCVEGRFETA 396
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNG 266
+F G L + ++ C ++ A F+ K ++ T N ++ G
Sbjct: 397 FTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYG 456
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C GN+ A R + + + +PD+ TY ++ ++ GKL A LF M E G P+
Sbjct: 457 YCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPN 516
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VT IID ++ +AL + +M G LP+ TYN +I K + +
Sbjct: 517 HVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG 576
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+M ++ LPN IT+ + L R R G
Sbjct: 577 KMVKQG--LLPNVITYTSFIDGLC----------RNGRTGLAF----------------- 607
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
K+ H EMEK+ P+ +Y+ +I+GL +GR EDA Y RL EP
Sbjct: 608 --KIFH---EMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEP 657
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/491 (21%), Positives = 204/491 (41%), Gaps = 70/491 (14%)
Query: 93 NVQNILKTCS-VSTKGEIEKALNQCELTLTDDLIVN------VINRYRFD--WEAAYTFF 143
N+Q S +S G+ E A+ L D L+ +IN+ + +E A+T F
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIF 400
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNR 197
KW+ G P + +N I+ + + +FD+M P+++ TY L+
Sbjct: 401 KWMLSHGSL-PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI---TYNTLIYG 456
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKN 251
Y + A+ + + K G D + L+ R +E A + F N
Sbjct: 457 YCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPN 516
Query: 252 EFGYDI------------------------------KTMNIILNGWCVLGNVYEAKRFWK 281
Y +T N++++G+ ++ EA+ F
Sbjct: 517 HVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG 576
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
++K P+ +TY +F++ L + G+ G A ++F M ++ P++ T + +I LC +
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636
Query: 342 RIPEA--LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
R +A +L + + GC PNV TY +L+K LC R + + M++K P+E
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQ--PSE 694
Query: 400 ITFNYLL----KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+ LL K+LK E + M+ G ++ Y ++ + ++ + ++
Sbjct: 695 EIYRALLIGECKNLKV-ESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQ 753
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVN------D 509
M +K D+ +TV++ GL +G + L H M + +T +++ D
Sbjct: 754 TMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALD 813
Query: 510 MNIKLKERGEQ 520
IK+ + +Q
Sbjct: 814 CAIKIPQISQQ 824
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 169/350 (48%), Gaps = 17/350 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI- 193
D A F+ SR+ + + ++ ++ LGRAR+F + + +M T G+
Sbjct: 112 DALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLF 171
Query: 194 --LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
++ Y M EAI F + EFG F LL+ L +K +E A + F+ + +
Sbjct: 172 VDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFK-KLH 230
Query: 252 EFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
EFG + +T NI++ C + A + + K C PD TY+ + L +K ++
Sbjct: 231 EFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVK 290
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
TAL + M KG PD +T N ++++LC K + EA +L +MK GC P+V YN++I
Sbjct: 291 TALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVI 350
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
C+ R + L +M + NG CLPN +++ L+ L K +E +E M NG
Sbjct: 351 TGFCREGRALDACQILRDMPE-NG-CLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNG 408
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWE---EMEKKGMGPDQRSYTVMI 473
Y++++ N E KV E M K+ + P + +++V++
Sbjct: 409 FIPHISIYHLLITGLCN---EGKVGEACEVLVMMTKQTLAPHESTWSVLL 455
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 13/267 (4%)
Query: 241 VAETFFE--SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
+A FE S + F + T + ++ C LG + K I + + + T F
Sbjct: 115 LAMEIFEVASRQPGFKHSYSTYHTLI---CKLGRARQFKTMEGLIQQMRKDGCPYTPGLF 171
Query: 299 VNALTKKGKLGT---ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
V+ + G++G A++ F M E G +P N ++ L K + AL + +++
Sbjct: 172 VDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHE 231
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
G PN TYN LI+ C ++ Y ++M ++ C+P+ T++ L++ L + +V
Sbjct: 232 FGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQG--CIPDVETYSILMQGLCRKSQV 289
Query: 416 P---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
VL+ M G TYN +L + +M+ G PD +Y +
Sbjct: 290 KTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTV 349
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVP 499
I G +GR DA +M G +P
Sbjct: 350 ITGFCREGRALDACQILRDMPENGCLP 376
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 402 FNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW---E 455
FN LL L K E + +++ G +T TYN++++ + + DK+ H +
Sbjct: 206 FNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCH---SDKLSHAYFLFN 262
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKL 514
+M K+G PD +Y++++ GL K +++ AL EM KG VP+ T L+N + K+
Sbjct: 263 KMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKM 322
Query: 515 KER 517
R
Sbjct: 323 NLR 325
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 177/397 (44%), Gaps = 41/397 (10%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A F + R+G SP F ++ L ++ R + +FD MP + + TY ++
Sbjct: 157 ALVLFLMMKRDG-CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 215
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
Y+ + +A+ + + ++ G D + L+ LC K E E + K F
Sbjct: 216 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTP 275
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
+ T ++NG+C+ +A R ++ SKC+ D + +N+L KK +L A L
Sbjct: 276 TVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL 335
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ G P+V+T IID C ++ ALEVL+ M+ GC PN TYNSL+ L K
Sbjct: 336 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKD 395
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTD 432
K++ L +M QK+G +PN IT+ LL+ + + E ME+NG K
Sbjct: 396 KKLHKAMALLTKM-QKDGI-IPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 453
Query: 433 TYNV------------------------ILKLYVN--WDCEDKVRHT------WEEMEKK 460
Y V + K+Y D K +T E M +
Sbjct: 454 AYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDE 513
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
G PD +Y+V++H L + RL +AL +M L+G+
Sbjct: 514 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 550
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 160/389 (41%), Gaps = 30/389 (7%)
Query: 122 DDLIVNVINRYRF--------DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV 173
D +I NVI D++ A+ F+ + + G P + + + D L +A R
Sbjct: 411 DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG-LKPDEHAYAVLTDALCKAGRAE 469
Query: 174 ELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
E + + Y L++ ++ A + A + +R + G D + LL L
Sbjct: 470 EAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHAL 529
Query: 234 CRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
C+ K + A + I I+++ G AKR + ++ S +P +
Sbjct: 530 CKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSA 589
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
TY F+N+ K+G+L A L M +G PDVVT N +ID I A L+
Sbjct: 590 TTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKR 649
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
M C PN TY L+KHL K L + + S + N I
Sbjct: 650 MVGASCEPNYWTYCLLLKHLLKGN--------LAYVRSVDTSGMWNLIEL---------- 691
Query: 413 EEVPW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
++ W +LERM ++G + TY+ ++ + ++ + M KG+ P++ YT+
Sbjct: 692 -DITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 750
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+I D E ALS+ M G P+
Sbjct: 751 LIKCCCDTKFFEKALSFVSIMSECGFQPQ 779
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 6/225 (2%)
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
R + +++ PD+VTY T + + K+G L TA R F+ + E G +P+ TCN ++
Sbjct: 54 RVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGY 113
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C + +A + M GC N +Y LI+ LC K + L M +++G C P
Sbjct: 114 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKAL-VLFLMMKRDG-CSP 171
Query: 398 NEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N F +L+ L K V + + M +NG S TYN ++ Y +
Sbjct: 172 NVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIK 231
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
E MEK G PD +Y +I+GL D+ + E+A + +G P
Sbjct: 232 ELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTP 275
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 12/243 (4%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D T N ++ +C G++ A R+++ +++ EP++ T V + G+L A LF
Sbjct: 67 DTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLF 126
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M G + + + +I LC K + +AL + MK GC PNV + LI LCK
Sbjct: 127 LMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKS 186
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLL---KSLKKPEEVPWVLERMERNGCKMSTD 432
R+ D M Q NG +P+ +T+N ++ L + + + E ME+NGC
Sbjct: 187 GRVGDARLLFDAMPQ-NGV-VPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDW 244
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEME---KKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TYN + + C+ K E + K+G P ++T +I+G + +DAL
Sbjct: 245 TYNTL----IYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMK 300
Query: 490 HEM 492
++M
Sbjct: 301 NKM 303
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 194/443 (43%), Gaps = 56/443 (12%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-------PDLVN 187
D +AA + R P + F A + L RR + + +FD+M PD+V
Sbjct: 68 DLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVV- 126
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRY-KHVEVAETF 245
Y L+ Y A + A+ +F R K+ G + +F L+++LC+ + + F
Sbjct: 127 --AYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVF 184
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA---- 301
E D+ N +++ C LG + +A+R + C D+ TY VNA
Sbjct: 185 QEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRA 244
Query: 302 -------------------------------LTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
+ G+L A +LF++ K PDV T
Sbjct: 245 GQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTY 304
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +I ALC K++ EAL + +E + G + +V TY+ L+ K R E M Q
Sbjct: 305 NLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNM-Q 362
Query: 391 KNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
K G C+P+ + +N L+ L K +E +LE M R G TYN+++ + +
Sbjct: 363 KAG-CMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRY 421
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GIL 506
+K + M+++ PD +Y +++GL R ++A F EM+ +P+ T G L
Sbjct: 422 EKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTL 481
Query: 507 VNDMNI--KLKERGEQGKKVIKL 527
++ + ++++ EQ +++K+
Sbjct: 482 IDTLAKAGRMEDALEQSARLVKM 504
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 159/327 (48%), Gaps = 8/327 (2%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESE 249
Y ++ + + EA +F+ + D+ + NLL+ LC+ K +E A T F E+E
Sbjct: 269 YNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTY-NLLIALCKSKQLEEALTLFQEAE 327
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ D+ T + +++ + G +A + ++ K+ C PD+V Y ++ L K+GK+
Sbjct: 328 QGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVD 387
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL L + M KG PD T N +ID L R +A MK R P+V TYN+L+
Sbjct: 388 EALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLL 447
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNG 426
L K++R + + DEM+ C+P+ TF L+ +L K + LE R+ + G
Sbjct: 448 NGLKKLRRTDEACDLFDEMQANK--CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMG 505
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
++ YN ++ + DK +++M + PD +YT+++ G +G A+
Sbjct: 506 HAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAM 565
Query: 487 SYFHEMRLKGMVPEPRT-GILVNDMNI 512
EM +G P T +L+ +++
Sbjct: 566 ELLQEMVREGHTPALATYNVLIRSLSM 592
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 161/366 (43%), Gaps = 43/366 (11%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFD--RRKEFGELDDLSAFQNLLLWLCRYKHVEVAE 243
++E T + + A ++ A+G+ D RR F + D + AF + WLC + VE A
Sbjct: 51 LSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTV-AFTAAMHWLCEVRRVEQAM 109
Query: 244 TFFES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK-SKCEPDSVTYATFVN 300
T F+ E + D+ N ++ G+C G+ A ++ + + C+P++V++ T V
Sbjct: 110 TLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVI 169
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K + AL +FQ M G K DV CN +I C + +A +L M C
Sbjct: 170 FLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACAR 229
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL------------------------ 396
+ TY L+ C+ +M V ++ E+ + +G L
Sbjct: 230 DAFTYGILVNAHCRAGQMHEVASFM-ELARHDGCALSAVNYNFIIQGFIRCGRLAEATQL 288
Query: 397 ----------PNEITFNYL--LKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
P+ T+N L L K+ EE + + E+ G + TY+ ++ +
Sbjct: 289 FESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKA 348
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTG 504
K + M+K G PD Y V+I L +G++++AL +M KG++P+ RT
Sbjct: 349 GRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTY 408
Query: 505 ILVNDM 510
+V D+
Sbjct: 409 NIVIDV 414
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 158/345 (45%), Gaps = 16/345 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
EA F +++E P +N +L L ++++ E + +F E +++ TY
Sbjct: 284 EATQLFESTMTKES--VPDVFTYN-LLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSY 340
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L++ + A +A+ VF ++ G + D + L+ L + V+ A E + N
Sbjct: 341 LMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLE-DMNRK 399
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G D +T NI+++ G +A F+ + + K PD VTY T +N L K + A
Sbjct: 400 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEA 459
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
LF M PD+ T +ID L R+ +ALE + G PN YN+LI
Sbjct: 460 CDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISG 519
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCK 428
C+ +++ YE +M + SC P+ IT+ L+ + +E M R G
Sbjct: 520 FCRSGQVDKGYELFQDMIE--CSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHT 577
Query: 429 MSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+ TYNV+++ L + ED ++EM KG PD ++Y+ +
Sbjct: 578 PALATYNVLIRSLSMAGQVEDAYT-LFKEMIAKGFNPDMQTYSAL 621
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 131/317 (41%), Gaps = 53/317 (16%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF------DEMPDLVNEK 189
E A T F+ + +G ++ ++D G+A R + ++VF MPD V
Sbjct: 316 LEEALTLFQE-AEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTV--- 371
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
Y +L++ V+EA+ + + G + D + ++ L E A +FF
Sbjct: 372 VYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMM 431
Query: 250 KN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
K + D+ T N +LNG L EA + ++ +KC PD T+ T ++ L K G++
Sbjct: 432 KRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRM 491
Query: 309 GTALRLFQAMWEKGRKP--------------------------DVVTCNCIIDA------ 336
AL + + G P D++ C+C D+
Sbjct: 492 EDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTIL 551
Query: 337 -LCFKKR--IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM----- 388
L F +R A+E+L+EM G P + TYN LI+ L ++E Y EM
Sbjct: 552 VLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGF 611
Query: 389 --EQKNGSCLPNEITFN 403
+ + S LPN T N
Sbjct: 612 NPDMQTYSALPNLSTPN 628
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 9/236 (3%)
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
+K ++K+ D+ T V + K G+ L + +KG VTC I A
Sbjct: 6 YKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGR 65
Query: 340 KKRIPEALEVLREMKNRG--CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
+ A+ +L +M+ RG C P+ + + + LC+++R+E D+M ++ C P
Sbjct: 66 AGDLDAAMGMLDDMR-RGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDM-RETCDCAP 123
Query: 398 NEITFNYLLKSLKKPEEVPWVLE---RMERNG-CKMSTDTYNVILKLYVNWDCEDKVRHT 453
+ + +N L+ K + L+ R+++ G CK + +++ ++
Sbjct: 124 DVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAV 183
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
++EM G+ D +IH G L A H M + T GILVN
Sbjct: 184 FQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVN 239
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 203/504 (40%), Gaps = 104/504 (20%)
Query: 92 INVQNILKTCSVSTKGEIEKALNQCELTLT----DDLIVNVINRYRFDWEAAYTFFKWVS 147
I V + K V E+ + +++ + L D ++V +++ R D EA +
Sbjct: 150 IVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRID-EALQVY----- 203
Query: 148 REGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMV 204
RE P N +L+ G+ + EL++ + +E +Y +L+ A V
Sbjct: 204 RENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRV 263
Query: 205 EEAIGVFDRRK------EFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKN----- 251
EEA+ +F R+ L + ++L LC+ ++ A FE +E+N
Sbjct: 264 EEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDS 323
Query: 252 -EFGYDIKTM----------------------------NIILNGWCVLGNVYEAKRFWKD 282
+G I + +++G C+ + +A+ + D
Sbjct: 324 WSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFAD 383
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ + C P VTY ++A K+G L A L + M E G PDVVT N ++D LC R
Sbjct: 384 MNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR 443
Query: 343 IPEALEVLREMKNRGCLPN----------------------------------------- 361
+ EAL + EM+ GC PN
Sbjct: 444 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGH 503
Query: 362 ---VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEV 415
V TY++LI LC I R++ L++M ++ C P +T N L+ L K +E
Sbjct: 504 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ--CKPTVVTQNTLIHGLCKAGRIKEA 561
Query: 416 PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
VL+ M +G TYN ++ + ++ R +M +G+ P+ +YT ++ G
Sbjct: 562 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 621
Query: 476 LYDKGRLEDALSYFHEMRLKGMVP 499
L RL +A F +M+ G P
Sbjct: 622 LCKANRLPEACGVFAQMKSSGCAP 645
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 186/426 (43%), Gaps = 35/426 (8%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
++ A F ++R G P +N ++D + E + +M PD+V
Sbjct: 374 FDDARELFADMNRRG-CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV--- 429
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA------- 242
TY +++ + VEEA+ +F+ + G + + ++L LC+ ++ A
Sbjct: 430 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLD 489
Query: 243 ETF-FESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
E F + G+ D+ T + +++G C + V +A+ +D++K +C+P VT T +
Sbjct: 490 EAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLI 549
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ L K G++ A + AM G+ PDVVT N ++ C + A E+L +M RG
Sbjct: 550 HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA 609
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
PNV TY +L+ LCK R+ +M K+ C PN T+ L+ +V L
Sbjct: 610 PNVVTYTALVSGLCKANRLPEACGVFAQM--KSSGCAPNLFTYTALILGFCSAGQVDGGL 667
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDK--------VRHTWEEMEKKGMGPDQRSYTV 471
+ C + + V L C+ +R E + + G + Y
Sbjct: 668 KLFGEMVCAGISPDHVVYGTLAAEL-CKSGRSARALEILREGRESLRSEAWGDE--VYRF 724
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEP-RTGILVNDMNIKLKERGEQGKKVIKLTSL 530
+ GL + G++E AL + +M G +P P R LV + K + GE + ++ L
Sbjct: 725 AVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL-CKSGQGGEARAVLEEIMDL 783
Query: 531 GLKGNA 536
G A
Sbjct: 784 AYGGKA 789
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 149/336 (44%), Gaps = 14/336 (4%)
Query: 177 QVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
Q+ + MP + N Y I++ A V++A+ + E + ++L+ L
Sbjct: 135 QLLEIMP-VANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDS 193
Query: 237 KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
++ A + + E + T+N++L G+C G V +A+ + + +C PD V+Y
Sbjct: 194 GRIDEALQVYRENRRE--PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYC 251
Query: 297 TFVNALTKKGKLGTALRLF------QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
T ++ L K G++ A+RLF + P + N +I LC RI EA+++
Sbjct: 252 TVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMF 311
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
+M R P+ +Y LI L K ++ ++ + P+ + + L+ L
Sbjct: 312 EKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVT--PSTVAYTSLIHGLC 369
Query: 411 KP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
++ + M R GC S TYNV++ ++ ++M + G PD
Sbjct: 370 MANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV 429
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+Y ++ GL R+E+AL F+EM G P R+
Sbjct: 430 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRS 465
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKC-EPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++ GWC +G +EA + + + +C P Y +++L+K+ + ++ Q M ++
Sbjct: 16 VIQGWCNVGRTFEAVKIFS--LMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDR 73
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP--------------------- 360
G PD T I+ LC ++ EA V+ EM++R P
Sbjct: 74 GCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERA 133
Query: 361 ----------NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP-NEITFNYLLKSL 409
N + YN ++ LCK R++ E M +K +P + + +L L
Sbjct: 134 FQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKR---IPLAAGSLDSVLVGL 190
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+ L+ N + T NV+L+ + + DK R M + PD+ SY
Sbjct: 191 MDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSY 250
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRL 494
++ GL GR+E+A+ F + L
Sbjct: 251 CTVLDGLCKAGRVEEAVRLFGDREL 275
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 189/410 (46%), Gaps = 49/410 (11%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV----------- 173
+VN+++ + + E+ FF WVSR + + F ++L+ L R R FV
Sbjct: 81 VVNLLDTHN-NTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIK 139
Query: 174 ---------ELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDR----RKEFGEL 220
+IQV E+ TY Y+ + ++ + +G FD R + E+
Sbjct: 140 SCRNEGEVKRVIQVLSEI-----NTTYDFGYTLYSFSTLLIQ-LGKFDMDGLGRDVYIEM 193
Query: 221 ------DDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY----DIKTMNIILNGWCVL 270
+L F ++ LC V+ AE + F Y D T ++ G C
Sbjct: 194 LNSGIRPNLFTFNAMIKILCNKGKVQEAELIM---GHIFHYGACPDTFTYTSLIIGHCKN 250
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
GN+ A + ++K C+P+SVTY+ +N L +G+L A+ + + M +KG +P V
Sbjct: 251 GNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAY 310
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
I +LC R EA+++L +MK RGC PNV TY +LI L + + E +M
Sbjct: 311 TIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLA 370
Query: 391 KNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+P +T++ L+ L + E + E M + +T+TYNVI+K + +
Sbjct: 371 D--GLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYI 428
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
K +++M K G P+ +Y ++IH + +G + +A+ M+ G+
Sbjct: 429 QKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGL 478
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 158/350 (45%), Gaps = 7/350 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P + ++A+++ L RF + +F+ M L N +TY +++ + + +++A +
Sbjct: 375 PTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAI 434
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCV 269
FD+ + G ++ + ++ + ++ A E K N D T +++G+
Sbjct: 435 FDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSR 494
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + A + ++++ P+ VTY +N K+ AL LF M E G P T
Sbjct: 495 GGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGT 554
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I RI EA +M +G LPNV TY S I LCK R ++ EM+
Sbjct: 555 YNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMK 614
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
+++ PN T++ L+ L + + ER+ +GC+ + DTY +++ +
Sbjct: 615 KRD--YFPNLCTYSSLIDGLCQEGQAEDA-ERLLDDGCEPNVDTYTTLVRGLCGKGRCYE 671
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
E M+KKG+ P + Y ++ G +E AL F M G P
Sbjct: 672 ADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQP 721
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 184/421 (43%), Gaps = 33/421 (7%)
Query: 93 NVQNILKTCS-VSTKGEIEKALNQCELTLTDDLIVN------VINRYRFD--WEAAYTFF 143
NVQ S +S G+ E A+ L D L+ +IN+ + +E A T F
Sbjct: 341 NVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIF 400
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNR 197
+W+ D P + +N I+ + +FD+M P+++ TY I+++
Sbjct: 401 EWMLSH-DSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVI---TYNIIIHI 456
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYD 256
Y + A+ + + K G D + NL+ R +E A + F E ++ +
Sbjct: 457 YFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPN 516
Query: 257 IKTMNIILNGWCVLGNVYEA-KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
+ T N I+NG+ + V +A FWK +++S P S TY ++ +K ++ A
Sbjct: 517 VVTYNAIINGYLTVAKVDDALALFWK-MVESGNVPSSGTYNMMISGFSKTNRISEAENFC 575
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M ++G P+V+T ID LC R A ++ EMK R PN+ TY+SLI LC+
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQE 635
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
+ E LD+ C PN T+ L++ L + E ++E M++ G + S +
Sbjct: 636 GQAEDAERLLDD------GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEE 689
Query: 433 TYNVILKLYV-NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
Y +L N + E ++ ++ M G P Y +I L + A F
Sbjct: 690 IYRALLVGQCKNLEVESALK-IFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQT 748
Query: 492 M 492
M
Sbjct: 749 M 749
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 159/362 (43%), Gaps = 19/362 (5%)
Query: 154 PGSNVFNAILDVL---GRARRFVELIQV----FDEMPDLVNEKTYGILLNRYAAAHMVEE 206
P FNA++ +L G+ + ELI + PD TY L+ + ++
Sbjct: 200 PNLFTFNAMIKILCNKGKVQE-AELIMGHIFHYGACPDTF---TYTSLIIGHCKNGNLDL 255
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIIL 264
A +FDR + G + + L+ LC +E A E E + G + + I +
Sbjct: 256 AFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLE-EMIDKGIEPTVHAYTIPI 314
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C G EA + + K C P+ TY ++ L++ GK A+ ++ M G
Sbjct: 315 VSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLV 374
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P VT + +I+ L + R AL + M + LPN TYN +IK C I ++
Sbjct: 375 PTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAI 434
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLY 441
D+M + S PN IT+N ++ K +LE M+ NG K+ T TY ++ +
Sbjct: 435 FDQMLKAGPS--PNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGF 492
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ + EM + G+ P+ +Y +I+G +++DAL+ F +M G VP
Sbjct: 493 SRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSS 552
Query: 502 RT 503
T
Sbjct: 553 GT 554
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 156/358 (43%), Gaps = 19/358 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
P + A++ L R +F I V+ +M P V TY L+N+ E
Sbjct: 339 GPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAV---TYSALINQLYVEGRFET 395
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILN 265
A+ +F+ L + + ++ C +++ A F+ K ++ T NII++
Sbjct: 396 ALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIH 455
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+ G + A R + + + + D+ TYA ++ ++ GKL A LF M E G P
Sbjct: 456 IYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISP 515
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+VVT N II+ ++ +AL + +M G +P+ TYN +I K R+ +
Sbjct: 516 NVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFC 575
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYV 442
+M ++ LPN IT+ + L K + M++ + TY+ + +
Sbjct: 576 GKMVKQ--GLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSL----I 629
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ C++ E + G P+ +YT ++ GL KGR +A M+ KG+ P
Sbjct: 630 DGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPS 687
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 149/352 (42%), Gaps = 41/352 (11%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETF 245
N TY L+N + +EEA+ + + + G + A+ ++ LC + E +
Sbjct: 271 NSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLL 330
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ +K G +++T +++G G A + ++ P +VTY+ +N L +
Sbjct: 331 GKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVE 390
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G+ TAL +F+ M P+ T N II C I +A + +M G PNV TY
Sbjct: 391 GRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITY 450
Query: 366 N-----------------------------------SLIKHLCKIKRMETVYEYLDEMEQ 390
N +LI + ++E + +EM +
Sbjct: 451 NIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVE 510
Query: 391 KNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
S PN +T+N ++ ++ K ++ + +M +G S+ TYN+++ + +
Sbjct: 511 HGIS--PNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRI 568
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + +M K+G+ P+ +YT I GL GR A FHEM+ + P
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFP 620
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 9/227 (3%)
Query: 294 TYATFVNALTKKGKL---GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
T +F L + GK G ++ M G +P++ T N +I LC K ++ EA ++
Sbjct: 166 TLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIM 225
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL- 409
+ + G P+ TY SLI CK ++ +E D M K+G C PN +T++ L+ L
Sbjct: 226 GHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRM-VKDG-CDPNSVTYSALINGLC 283
Query: 410 --KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+ EE +LE M G + + Y + + + + +M+K+G GP+ +
Sbjct: 284 SEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQ 343
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIK 513
+YT +I GL G+ E A+ +H+M G+VP T L+N + ++
Sbjct: 344 TYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVE 390
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 95/251 (37%), Gaps = 6/251 (2%)
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAA 201
W E P S +N ++ + R E +M L N TY ++
Sbjct: 541 WKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKN 600
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
A +F K+ +L + +L+ LC+ E AE + ++ T
Sbjct: 601 GRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEP---NVDTYT 657
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++ G C G YEA + + + K +P Y + K ++ +AL++F +M
Sbjct: 658 TLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTT 717
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G +P + +I ALC +A + + M + + + L+ L K +
Sbjct: 718 GFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLS 777
Query: 382 YEYLDEMEQKN 392
E L ME +N
Sbjct: 778 LELLHVMESRN 788
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 203/451 (45%), Gaps = 45/451 (9%)
Query: 86 PGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
P E+ + IL S K E L L +VN++ ++ + ++ FF W
Sbjct: 46 PFPELVSKISTILS----SPKWEHSSELCHLSPKLKPHHVVNILQTHK-NTDSVLRFFFW 100
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFV-----------------ELIQVFDEMPDLVNE 188
+SR + + F ++L+ L R R F E+ +V + ++ ++
Sbjct: 101 ISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSK 160
Query: 189 KTYG-------ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+G LL + MV+ A ++ + G L F ++ LC+ V+
Sbjct: 161 YDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQE 220
Query: 242 AETF------FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
A+ +++ N F Y ++IL G C N+ A + ++K C+P+SVTY
Sbjct: 221 AKLIMSHIFRYDAYPNAFTYT----SLIL-GHCRNHNLDLAFAMFDRMVKDGCDPNSVTY 275
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+T +N L +G+L A+ + + M +KG +P V T + +LC EA+E+L +MK
Sbjct: 276 STLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKK 335
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKP 412
RGC+PN+ T+ +LI L + + E +M +P +T+N L+ L +
Sbjct: 336 RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG--LVPTTVTYNALINQLCVEGRF 393
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
E + + M +G ST TYN I+K + K +++M K G P+ +Y +
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
I+G +G L +A+ M+ G+ P+ T
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWT 484
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 163/361 (45%), Gaps = 17/361 (4%)
Query: 154 PGSNVFNAILDVL---GR---ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P FN ++++L GR A+ + I +D P N TY L+ + H ++ A
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYP---NAFTYTSLILGHCRNHNLDLA 256
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIILN 265
+FDR + G + + L+ LC +E A E E + G + + T I L
Sbjct: 257 FAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLE-EMVQKGIEPTVYTYTIPLV 315
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G EA + K C P+ T+ ++ L++ GK A+ L+ M G P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
VT N +I+ LC + R A + + M + G LP+ TYN +IK C + ++
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
D+M + S PN IT+N L+ K +LE M+ NG K TY ++ +
Sbjct: 436 DKMLKAGSS--PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS 493
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ + M + G+ P+ +YT +I G ++ +++DAL+ F +M G +P +
Sbjct: 494 RGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553
Query: 503 T 503
T
Sbjct: 554 T 554
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 156/352 (44%), Gaps = 11/352 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P + +NA+++ L RF +F M L + +TY ++ + +++A+ +
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI 434
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCV 269
FD+ + G ++ + L+ C+ ++ A E K N D T +++G+
Sbjct: 435 FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + A + +++ P+ VTY ++ K+ AL LF M E G P T
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQT 554
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I I EA +M +G LPNV TY S I LC+ R ++ EME
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEME 614
Query: 390 QKNGSCLPNEITFNYLLKSL-----KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
++N PN T++ L+ L + E+ +L R+ GC+ + DTY ++K
Sbjct: 615 KRNY--FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGE 672
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ M+KKG+ P + Y ++ G ++E AL+ F+ M G
Sbjct: 673 GRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLG 724
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 145/355 (40%), Gaps = 44/355 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P F A++ L R +F I ++ +M P V TY L+N+ E A
Sbjct: 340 PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV---TYNALINQLCVEGRFETA 396
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNG 266
+F G L + ++ C ++ A F+ K ++ T N ++ G
Sbjct: 397 FTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYG 456
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C GN+ A R + + + +PD+ TY ++ ++ GKL A LF M E G P+
Sbjct: 457 YCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPN 516
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VT IID ++ +AL + +M G LP+ TYN +I K + +
Sbjct: 517 HVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG 576
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+M ++ LPN IT+ + L R R G
Sbjct: 577 KMVKQG--LLPNVITYTSFIDGLC----------RNGRTGLAF----------------- 607
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
K+ H EMEK+ P+ +Y+ +I+GL +GR EDA Y RL EP
Sbjct: 608 --KIFH---EMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEP 657
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/491 (21%), Positives = 205/491 (41%), Gaps = 70/491 (14%)
Query: 93 NVQNILKTCS-VSTKGEIEKALNQCELTLTDDLIVN------VINRYRFD--WEAAYTFF 143
N+Q S +S G+ E A+ L D L+ +IN+ + +E A+T F
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIF 400
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNR 197
KW+ G P + +N I+ + + +FD+M P+++ TY L+
Sbjct: 401 KWMLSHGSL-PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI---TYNTLIYG 456
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKN 251
Y + A+ + + K G D + L+ R +E A + F N
Sbjct: 457 YCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPN 516
Query: 252 EFGYDI------------------------------KTMNIILNGWCVLGNVYEAKRFWK 281
Y +T N++++G+ ++ EA+ F
Sbjct: 517 HVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG 576
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
++K P+ +TY +F++ L + G+ G A ++F M ++ P++ T + +I LC +
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636
Query: 342 RIPEA--LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
R +A +L + + GC PNV TY +L+K LC R + + M++K P+E
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQ--PSE 694
Query: 400 ITFNYLL----KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+ LL K+LK E + M+ G ++ Y ++ + ++ + ++
Sbjct: 695 EIYRALLIGECKNLKV-ESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQ 753
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVN------D 509
M +K D+ ++TV++ GL +G + L H M + +T +++ D
Sbjct: 754 TMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALD 813
Query: 510 MNIKLKERGEQ 520
IK+ + +Q
Sbjct: 814 CAIKIPQISQQ 824
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 163/351 (46%), Gaps = 9/351 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
PG VF+A+ VL F E +Q F +M ++ LL+++A +
Sbjct: 61 PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCV 269
F G + + ++ +C+ +E A FE K D T N +++G+
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+G + + F++++ CEPD +TY T +N K GKL L F+ M + G KP+VV+
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ ++DA C + + +AL+ +M+ G +PN TY SL+ CKI + + DEM
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS 300
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
Q N +T+ L+ L ++ +E + +M G + +Y ++ +V
Sbjct: 301 QVGVEW--NVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKN 358
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
D+ +EM+ +G+ PD Y I L ++E A +EM+ KG+
Sbjct: 359 MDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGI 409
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 44/287 (15%)
Query: 259 TMNIILNGWCVLGNVY----------EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
T N+ + G+ V ++ EA + + + + + P + + ++ + GK
Sbjct: 55 TRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKT 114
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
R F+ M G KP V T N +ID +C + I A + EMK RG +P+ TYNS+
Sbjct: 115 DGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSM 174
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
I K+ R++ + +EM K+ SC P+ IT+N L+ K ++P LE
Sbjct: 175 IDGYGKVGRLDDTVYFFEEM--KSMSCEPDVITYNTLINCFCKFGKLPKGLE-------- 224
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+ EM++ G+ P+ SY+ ++ + ++ AL +
Sbjct: 225 ------------------------FFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKF 260
Query: 489 FHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
+ +MR G+VP T + D K+ + + +++ +G++ N
Sbjct: 261 YVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWN 307
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 179/429 (41%), Gaps = 53/429 (12%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D EAA F+ + G P + +N+++D G+ R + + F+EM PD++
Sbjct: 148 DIEAASGLFEEMKFRG-LIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVI-- 204
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-- 246
TY L+N + + + + F K+ G ++ ++ L+ C+ ++ A F+
Sbjct: 205 -TYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVD 263
Query: 247 --------------------------------ESEKNEFG--YDIKTMNIILNGWCVLGN 272
E ++ G +++ T +++G C +
Sbjct: 264 MRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVER 323
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+ EA+ + ++ + P+ +Y ++ K + AL L M +G KPD++
Sbjct: 324 IKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGT 383
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
I +LC ++I A V+ EM+ +G N Y +L+ K + L+EM + +
Sbjct: 384 FIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELD 443
Query: 393 GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC-EDKVR 451
+TF L+ L K + V ++ R I ++ C ED+V
Sbjct: 444 IEV--TAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVE 501
Query: 452 HT---WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVN 508
+E+M +KG+ PD+ +YT +I G +G + AL+ +M G+ R G L
Sbjct: 502 AATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGARFGDLCQ 561
Query: 509 DMNIKLKER 517
+ IKL R
Sbjct: 562 N-TIKLSLR 569
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 173/378 (45%), Gaps = 22/378 (5%)
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVEL----IQVFDEMPDLVNEKTYGILL 195
+ + R D SP + + LD+ R R +L + +F +T+ IL
Sbjct: 88 HALLRLPERSRDLSPCT--VDLALDLAARLRHPRQLTSSILALFPRHGLAFTPRTFPILF 145
Query: 196 NRYAAAHMVEE-AIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
R+A +H + AI +F + G DL F +LL L + + A + + + F
Sbjct: 146 ERFAMSHRRPDLAIRLFLSLHRSHGIAQDLPLFNSLLDALVKSRRASKAASLVRALEQRF 205
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
D T N + +GWC + + A + +++S P TY + + G+L A
Sbjct: 206 PPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWD 265
Query: 314 LFQAMWEKGR-----KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
F M +G KPDVV+ ++ L ++ +A +V EM GC P+ TYN+L
Sbjct: 266 FFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNAL 325
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERN 425
I+ CK +E D+M +K +PN +T+ L++ L +V +L+RM+
Sbjct: 326 IQVTCKKGNLEDAVAVFDDMVRKG--YIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSE 383
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLED 484
GC+ + TYNV+++ + +K +E M K + P+Q +Y ++I ++ + R ED
Sbjct: 384 GCEPNVQTYNVLIRYSLEEGEIEKGLDLFETMSKGEECLPNQDTYNIIISAMFVRKRAED 443
Query: 485 ---ALSYFHEMRLKGMVP 499
A EM +G +P
Sbjct: 444 MAVAARMVVEMVDRGYLP 461
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 114/220 (51%), Gaps = 9/220 (4%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D + + ++AL K + A L +A+ E+ PD VT N + D C K AL++L
Sbjct: 174 DLPLFNSLLDALVKSRRASKAASLVRAL-EQRFPPDAVTYNTLADGWCRVKDTSRALDIL 232
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS---CLPNEITFNYLLK 407
R+M G P TYN ++K + +++ +++ +M+++ + C P+ +++ +L
Sbjct: 233 RQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLH 292
Query: 408 SLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVN-WDCEDKVRHTWEEMEKKGMG 463
L + ++ V + M GCK ST TYN ++++ + ED V +++M +KG
Sbjct: 293 GLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAV-AVFDDMVRKGYI 351
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
P+ +YTV+I GL G++ A+ M+ +G P +T
Sbjct: 352 PNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQT 391
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 24/261 (9%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-----------PDLVNEKTYGILLNR 197
E +P +N IL R+ + F +M PD+V +Y +L+
Sbjct: 237 ESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVV---SYTTVLHG 293
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-- 255
A +++A VFD G + + L+ C+ ++E A F+ + GY
Sbjct: 294 LGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRK-GYIP 352
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
++ T +++ G C G V A + + CEP+ TY + ++G++ L LF
Sbjct: 353 NVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLF 412
Query: 316 QAMWEKGRK--PDVVTCNCIIDALCFKKRIPE---ALEVLREMKNRGCLPNVTTYNSLIK 370
+ M KG + P+ T N II A+ +KR + A ++ EM +RG LP +N ++
Sbjct: 413 ETM-SKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRKFMFNRVLN 471
Query: 371 HLCKIKRMETVYEYLDEMEQK 391
L E E L M++K
Sbjct: 472 GLMLTGNQELSRELL-RMQEK 491
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LK 410
++ G ++ +NSL+ L K +R + +EQ+ P+ +T+N L +K
Sbjct: 167 RSHGIAQDLPLFNSLLDALVKSRRASKAASLVRALEQRFP---PDAVTYNTLADGWCRVK 223
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE---EMEKKGMG---- 463
+L +M +G + TYN+ILK + +++H W+ +M+++G
Sbjct: 224 DTSRALDILRQMVESGIAPTKATYNIILKGFFR---SGQLQHAWDFFLQMKRRGSNDENC 280
Query: 464 -PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
PD SYT ++HGL G+L+ A F EM ++G P T
Sbjct: 281 KPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTAT 321
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 180/408 (44%), Gaps = 44/408 (10%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D A + + R+G P + +N ++ + RA R + ++VFDEM + L N TY
Sbjct: 42 DLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITY 101
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE---S 248
+++ + +E + D+ G + + LL LCR + + S
Sbjct: 102 NTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMAS 161
Query: 249 EK---NEFGYDI------------------------------KTMNIILNGWCVLGNVYE 275
+K + F Y I T +I+LNG C G V
Sbjct: 162 QKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSI 221
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A+ + ++ + P V Y T +N + G+L A F M + KPD +T N +I+
Sbjct: 222 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 281
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
LC +RI A ++L EM++ G P V T+N+LI + ++E + L EM Q+NG
Sbjct: 282 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM-QENG-L 339
Query: 396 LPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
PN +++ ++ + K ++P +L+ M + YN I+ YV D+
Sbjct: 340 KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFI 399
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
E+M+ G+ P +Y ++I GL ++ ++ +A + + ++P+
Sbjct: 400 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 447
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 162/376 (43%), Gaps = 10/376 (2%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D EA + + G P + +N +L L RA R E + DEM + + TY
Sbjct: 113 DLEAGFRLRDQMVCHG-LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 171
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
IL + + + + +F + + G LL LC+ V +AE +S N
Sbjct: 172 SILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 231
Query: 252 EFGYDIKTM-NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ + N ++NG+C G + A + + +PD +TY +N L K ++
Sbjct: 232 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 291
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L M + G P V T N +IDA ++ + VL EM+ G PNV +Y S++
Sbjct: 292 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 351
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--KKPEEVPWVL-ERMERNGC 427
CK ++ LD+M K+ LPN +N ++ + P + ++L E+M+ NG
Sbjct: 352 AFCKNGKIPEAVAILDDMFHKD--VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 409
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
S TYN+++K N + + + PD SY +I +G ++ AL
Sbjct: 410 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 469
Query: 488 YFHEMRLKGMVPEPRT 503
M G+ RT
Sbjct: 470 LQQRMHKYGIKSTVRT 485
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 131/312 (41%), Gaps = 31/312 (9%)
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-------------EKNEFGYDIK 258
D R+ FG L A + W + A E+ N F Y
Sbjct: 10 DVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY--- 66
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
N+++ G G +A + ++ + P+ +TY T ++ K G L RL M
Sbjct: 67 --NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 124
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK---I 375
G KP+ +T N ++ LC R+ E +L EM ++ +P+ TY+ L L +
Sbjct: 125 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 184
Query: 376 KRMETVY-EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMST 431
K M +++ +YL KNG + + T + LL L K +V VL+ + G +
Sbjct: 185 KAMLSLFGKYL-----KNGVTI-GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 238
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
YN ++ Y + T+ +M+ + + PD +Y +I+GL R+ +A E
Sbjct: 239 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 298
Query: 492 MRLKGMVPEPRT 503
M+ G+ P T
Sbjct: 299 MQDNGVNPTVET 310
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 161/380 (42%), Gaps = 49/380 (12%)
Query: 91 AINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRY--RFDWEAAY-TFFKWVS 147
+I + + K VS E+ ++L L T + +IN Y + E A+ TF + S
Sbjct: 207 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 266
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-LVNE--KTYGILLNRYAAAHMV 204
R P +NA+++ L +A R + EM D VN +T+ L++ Y +
Sbjct: 267 RH--IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 324
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
E+ V +E G ++ ++ + I+
Sbjct: 325 EKCFIVLSEMQENGLKPNVVSYGS----------------------------------IV 350
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N +C G + EA D+ P++ Y ++A + G A L + M G
Sbjct: 351 NAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 410
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P +VT N +I LC + +I EA E++ + N +P+ +YN+LI C ++ +
Sbjct: 411 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID---KA 467
Query: 385 LDEMEQKNGSCLPNEI-TFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
LD ++ + + + + T++ L+ L + E+ ++ ++M +N S +N++++
Sbjct: 468 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 527
Query: 441 YVNWDCEDKVRHTWEEMEKK 460
Y + E K +EM +K
Sbjct: 528 YSKYGNEIKAEDLRKEMLQK 547
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 109/274 (39%), Gaps = 49/274 (17%)
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP-DVV 328
LG + +R + + + PD+ + V A G LG A+ + + M G P +
Sbjct: 5 LGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAF 64
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI------------------- 369
+ N +I + R +A+EV EM R LPN TYN++I
Sbjct: 65 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 124
Query: 370 ----------------KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
LC+ RM LDEM + +P+ T++ L L +
Sbjct: 125 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ--KMVPDGFTYSILFDGLSRNG 182
Query: 414 EVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE----MEKKGMGPDQ 466
+ +L + +NG + T +++L N C+D EE + G+ P +
Sbjct: 183 DSKAMLSLFGKYLKNGVTIGDYTCSILL----NGLCKDGKVSIAEEVLQSLVNAGLVPTR 238
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
Y +I+G G LE A S F +M+ + + P+
Sbjct: 239 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPD 272
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 9/323 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
P +V T G LLN + + +EA+ + D FG + ++ + ++ LC+ + + A
Sbjct: 147 PSIV---TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 243 -ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
E F+ EK D T N +++G G +A R +D++K K +P+ + + ++
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K+G L A L++ M + P+V T N +I+ C + +A + M ++GC P+
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---V 418
V TYN+LI CK KR+E + EM + + + T+N L+ + ++ V
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQ--GLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
RM G TYN++L N +K E+++K M D +Y ++I GL
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 479 KGRLEDALSYFHEMRLKGMVPEP 501
+L++A F + KG+ P+
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDA 464
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 130/303 (42%), Gaps = 6/303 (1%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNII 263
++A +F + + + F +L + + ++ + +N +D+ + I+
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ +C + A ++K P VT + +N + + A+ L +M G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P+VV N +I+ LC + + ALEV M+ +G + TYN+LI L R
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKL 440
L +M ++ PN I F L+ + K E + + M R + TYN ++
Sbjct: 241 LLRDMVKRKID--PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ C ++ ++ M KG PD +Y +I G R+ED + F EM +G+V +
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 501 PRT 503
T
Sbjct: 359 AFT 361
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 6/242 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGI 193
+AA V R+ D P F A++D + +E ++ EM + N TY
Sbjct: 237 DAARLLRDMVKRKID--PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNE 252
L+N + + +A +FD G D+ + L+ C+ K VE F E
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D T N +++G+C G + A++ + ++ PD VTY ++ L GK+ AL
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ + + + D++T N II LC ++ EA + R + +G P+ Y ++I L
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Query: 373 CK 374
C+
Sbjct: 475 CR 476
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 11/225 (4%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M + G +P +VT +++ C R EA+ ++ M G +PNV YN++I LCK +
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV-LERMERNGCKMSTDT--- 433
+ E ME+K + +T+N L+ L W R+ R+ K D
Sbjct: 200 LNNALEVFYCMEKK--GIRADAVTYNTLISGLSNSGR--WTDAARLLRDMVKRKIDPNVI 255
Query: 434 -YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ ++ +V + R+ ++EM ++ + P+ +Y +I+G G L DA F M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 493 RLKGMVPEPRTGILVNDMNIKLKERGEQGKKVI-KLTSLGLKGNA 536
KG P+ T + K K R E G K+ ++T GL G+A
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTYQGLVGDA 359
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 7/197 (3%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
K A LF M + P +V ++ + + + + +M+N G ++ ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERME 423
LI C+ R+ L +M + P+ +T LL + +E +++ M+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFR--PSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 424 RNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G + YN ++ L N D + + + MEKKG+ D +Y +I GL + GR
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNAL-EVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 483 EDALSYFHEMRLKGMVP 499
DA +M + + P
Sbjct: 236 TDAARLLRDMVKRKIDP 252
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 168/373 (45%), Gaps = 10/373 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP +N ++ + + F EM L N TY L++ Y ++EA G
Sbjct: 7 SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFG 66
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+ G +L ++ ++ LCR ++ A E E F D T N +LNG+C
Sbjct: 67 LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 126
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
GN ++A +++++ P VTY +N++ K L A+ F M +G +P+
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +ID + + EA +L EM G P+V TYN+ I C ++RME + EM
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWD 445
+K P+ ++++ ++ + E+ + M G TY+ +++
Sbjct: 247 VEK--GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 304
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-G 504
+ +EM G+ PD+ +YT +I+ +G L AL EM KG +P+ T
Sbjct: 305 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYS 364
Query: 505 ILVNDMNIKLKER 517
+L+N +N + + R
Sbjct: 365 VLINGLNKQARTR 377
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 169/379 (44%), Gaps = 30/379 (7%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
++P +N +L+ + F + + + EM P +V TY L+N A +
Sbjct: 111 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVV---TYTALINSMCKARNLN 167
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIIL 264
A+ FD+ + G + + L+ R + E E ++ F + T N +
Sbjct: 168 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 227
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G CVL + EA +++++ PD V+Y+T ++ +KG+L A ++ Q M EKG
Sbjct: 228 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 287
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD VT + +I LC +R+ EA ++ +EM + G P+ TY +LI C +
Sbjct: 288 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 347
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLY 441
DEM K LP+ +T++ L+ L K E +L ++ S TY+ +++
Sbjct: 348 HDEMIHK--GFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENC 405
Query: 442 VNWD-----------CEDKVRH----TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
N + C + H +E M ++ P + Y V+IHG G L A
Sbjct: 406 SNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAF 465
Query: 487 SYFHEMRLKGMVPEPRTGI 505
+ + EM G VP T I
Sbjct: 466 NLYKEMIHSGFVPHTVTVI 484
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 109/220 (49%), Gaps = 5/220 (2%)
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+I+S+ P+ TY + G+L L F M G P+VVT N +IDA C R
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
I EA +L+ M ++G PN+ +YN +I LC+ M+ +E L+EM K + P+E+T+
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFT--PDEVTY 118
Query: 403 NYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
N LL K L M RNG S TY ++ ++ +++M
Sbjct: 119 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+G+ P++R+YT +I G +G L +A +EM G P
Sbjct: 179 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSP 218
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 159/357 (44%), Gaps = 30/357 (8%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + A+++ + +AR ++ FD+M P NE+TY L++ ++ ++ E
Sbjct: 147 SPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP---NERTYTTLIDGFSRQGLLNE 203
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
A + + E G + + + C + +E A E + D+ + + I++
Sbjct: 204 AYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIIS 263
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C G + A + +++++ PD+VTY++ + L + +L A L Q M + G P
Sbjct: 264 GFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPP 323
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D T +I+A C + + +AL + EM ++G LP+ TY+ LI L K R L
Sbjct: 324 DEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL 383
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPE------------------EVPWVLERMERNGC 427
++ + +P+++T++ L+++ E E V E M
Sbjct: 384 FKLIYE--ESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNH 441
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
K YNVI+ + K + ++EM G P + +I L+ +G E+
Sbjct: 442 KPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE 498
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 125/332 (37%), Gaps = 64/332 (19%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY ++ G +SP +NA + R E + V EM PD+V +Y
Sbjct: 204 AYRILNEMTESG-FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVV---SYS 259
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKN 251
+++ + ++ A + E G D + +L+ LC + + E + E
Sbjct: 260 TIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDM 319
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK------- 304
D T ++N +CV G++ +A ++I PD+VTY+ +N L K
Sbjct: 320 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 379
Query: 305 -------------------------------------------KGKLGTALRLFQAMWEK 321
KG + A R+F++M E+
Sbjct: 380 KRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVER 439
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
KP N II C +P+A + +EM + G +P+ T +LIK L K E +
Sbjct: 440 NHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEM 499
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
E + + + SC NE +L + E
Sbjct: 500 SEVIGDTLR---SCRLNEAELAKVLVEINHKE 528
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 165/355 (46%), Gaps = 12/355 (3%)
Query: 159 FNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE---AIGVFD 212
FN +++ L G+ + ++I+ N TY L++ Y + + A +
Sbjct: 166 FNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILK 225
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLG 271
+ G + F L+ C+ K+V A + F E + ++ T N ++NG C G
Sbjct: 226 EMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNG 285
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
V EA ++ S +P+ +T+ +N K + A LF M ++G P+V T N
Sbjct: 286 KVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYN 345
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+IDA C + + +A + R M +G P+V+TYN LI LC+ +E + EM+ K
Sbjct: 346 ILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTK 405
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
+ + IT+N L+ SL E+ +L+ M R G K S TYN ++ Y
Sbjct: 406 H--LKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLR 463
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +MEK G + +Y V+I G K +LEDA +EM KG++P T
Sbjct: 464 AALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMT 518
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 146/310 (47%), Gaps = 6/310 (1%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
NE T+ IL++ + V A+ VF G ++ + +L+ LC V A
Sbjct: 235 NEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALR 294
Query: 247 ESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ N +I T N +LNG+C V +A + D+ K P+ TY ++A K
Sbjct: 295 DQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKD 354
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
+ A L++ M KG PDV T NC+I LC K + A ++ EM + ++ TY
Sbjct: 355 ENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITY 414
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERM 422
N LI LC M+ LDEM +K P+++T+N ++ K + L +M
Sbjct: 415 NILIDSLCNKGEMKKALRLLDEMCRK--GLKPSQLTYNTMIDGYCKEGNLRAALNLRSQM 472
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
E+ G + TYNV++K + D + EM +KG+ P++ +Y ++ + +KG +
Sbjct: 473 EKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532
Query: 483 EDALSYFHEM 492
D + +++
Sbjct: 533 PDIEGHLYKV 542
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 167/376 (44%), Gaps = 20/376 (5%)
Query: 143 FKWVSREGDYSPGSNVF--NAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGIL 194
F+ R DY +V N ++ L + ++ V+ EM P L+ ++ I+
Sbjct: 113 FEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLI---SFNIV 169
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY----KHVEVAETFFESEK 250
+N + +A + + K G ++ + L+ C+ K + E
Sbjct: 170 INGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRA 229
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ + T NI+++G+C NV A + + ++ + +P+ VTY + +N L GK+
Sbjct: 230 DGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNE 289
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L M KP+++T N +++ C K + +A E+ +M +G PNVTTYN LI
Sbjct: 290 ATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILID 349
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGC 427
CK + ME + M K G C P+ T+N L+ L + E ++ M+
Sbjct: 350 AYCKDENMEDAFALYRIMLGK-GVC-PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHL 407
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
K TYN+++ N K +EM +KG+ P Q +Y MI G +G L AL+
Sbjct: 408 KADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALN 467
Query: 488 YFHEMRLKGMVPEPRT 503
+M G + T
Sbjct: 468 LRSQMEKVGRLANVAT 483
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 143/289 (49%), Gaps = 13/289 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
AA F ++R+G P +N++++ L + E + D+M P+++ T
Sbjct: 253 SAAMKVFAEMNRQG-VKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNII---T 308
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
+ LLN + MV++A +FD + G +++ + L+ C+ +++E A +
Sbjct: 309 HNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIML 368
Query: 251 NE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ D+ T N ++ G C G++ A+ ++ + D +TY +++L KG++
Sbjct: 369 GKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMK 428
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
ALRL M KG KP +T N +ID C + + AL + +M+ G L NV TYN LI
Sbjct: 429 KALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLI 488
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV 418
K CK ++E L+EM +K +PN +T+ + + + + VP +
Sbjct: 489 KGFCKKDKLEDANGLLNEMLEK--GLIPNRMTYEIVTEEMMEKGFVPDI 535
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+S+ V A K + F+ + G K V +CN ++ L I + V
Sbjct: 92 NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVY 151
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS-- 408
+EM R P + ++N +I LCK+ ++ + +++M+ + S N IT+N L+
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVS--ANVITYNTLIDGYC 209
Query: 409 ----LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK----VRHTWEEMEKK 460
+ K + +L+ M +G + T+N+++ + C+DK + EM ++
Sbjct: 210 KMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGF----CKDKNVSAAMKVFAEMNRQ 265
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
G+ P+ +Y +I+GL + G++ +A + +M
Sbjct: 266 GVKPNVVTYNSLINGLCNNGKVNEATALRDQM 297
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 174/362 (48%), Gaps = 9/362 (2%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E + P N +++ L + + E + + D+M + N TYG +LN +
Sbjct: 284 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 343
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIIL 264
A+ + + +E D + ++ LC++ ++ A F E E +I T NI++
Sbjct: 344 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 403
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G+C G + + +D+IK K P+ VT++ +++ K+GKL A L + M +G
Sbjct: 404 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 463
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD +T +ID C + + +A +++ M ++GC PN+ T+N LI CK R++ E
Sbjct: 464 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 523
Query: 385 LDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
+M + + + +T+N L++ L K + + M + TY ++L
Sbjct: 524 FRKMSLR--GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 581
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ +K +E++EK M D Y ++IHG+ + +++DA F + LKG+ P
Sbjct: 582 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 641
Query: 502 RT 503
+T
Sbjct: 642 KT 643
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 140/320 (43%), Gaps = 39/320 (12%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N T+ L+N V EA+ + DR E G DL
Sbjct: 255 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI---------------------- 292
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
T+N ++NG C+ G EA +++ C+P++VTY +N + K G
Sbjct: 293 ------------TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 340
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ A+ L + M E+ K D V + IID LC + A + EM+ +G N+ TYN
Sbjct: 341 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 400
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERME 423
LI C R + + L +M ++ + PN +TF+ L+ S K E + + M
Sbjct: 401 ILIGGFCNAGRWDDGAKLLRDMIKRKIN--PNVVTFSVLIDSFVKEGKLREAEELHKEMI 458
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G T TY ++ + + DK + M KG P+ R++ ++I+G R++
Sbjct: 459 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 518
Query: 484 DALSYFHEMRLKGMVPEPRT 503
D L F +M L+G+V + T
Sbjct: 519 DGLELFRKMSLRGVVADTVT 538
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 146/304 (48%), Gaps = 6/304 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNI 262
++AI +F L + F L + + K ++ + E +++ T++I
Sbjct: 167 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 226
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++N +C + A IIK EP+++T++T +N L +G++ AL L M E G
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
KPD++T N +++ LC + EA+ ++ +M GC PN TY ++ +CK +
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILK 439
E L +ME++N + + ++ ++ L K + + ME G + TYN+++
Sbjct: 347 ELLRKMEERNIKL--DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 404
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ N D +M K+ + P+ +++V+I +G+L +A EM +G+ P
Sbjct: 405 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 464
Query: 500 EPRT 503
+ T
Sbjct: 465 DTIT 468
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 139/310 (44%), Gaps = 13/310 (4%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N T+ +L++ + + EA + G D + +L+ C+ H++ A
Sbjct: 430 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 489
Query: 247 ESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
+ ++ G D I+T NI++NG+C + + ++ + D+VTY T + +
Sbjct: 490 DLMVSK-GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 548
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
GKL A LFQ M + P++VT ++D LC +ALE+ +++ ++
Sbjct: 549 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 608
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--KKP-EEVPWVLER 421
YN +I +C +++ ++ + K P T+N ++ L K P E + +
Sbjct: 609 YNIIIHGMCNASKVDDAWDLFCSLPLK--GVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 666
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
ME +G TYN++++ ++ K EE+++ G D + ++I L D
Sbjct: 667 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD--- 723
Query: 482 LEDALSYFHE 491
D +YF +
Sbjct: 724 --DKANYFSK 731
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 147/327 (44%), Gaps = 18/327 (5%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM- 182
LI N R+D + A + R+ +P F+ ++D + + E ++ EM
Sbjct: 402 LIGGFCNAGRWD-DGAKLLRDMIKRK--INPNVVTFSVLIDSFVKEGKLREAEELHKEMI 458
Query: 183 -----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
PD + TY L++ + + +++A + D G ++ F L+ C+
Sbjct: 459 HRGIAPDTI---TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 515
Query: 238 HVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
++ E F + D T N ++ G+C LG + AK +++++ K P+ VTY
Sbjct: 516 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 575
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
++ L G+ AL +F+ + + + D+ N II +C ++ +A ++ + +
Sbjct: 576 ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 635
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS-LKKPEEV 415
G P V TYN +I LCK + +ME+ + P+ T+N L+++ L +
Sbjct: 636 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA--PDGWTYNILIRAHLGDGDAT 693
Query: 416 PWV--LERMERNGCKMSTDTYNVILKL 440
V +E ++R G + T +++ +
Sbjct: 694 KSVKLIEELKRCGFSVDASTIKMVIDM 720
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 103/259 (39%), Gaps = 39/259 (15%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
+P + + +++D + + Q+ D M N +T+ IL+N Y A+ +++ +
Sbjct: 463 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 522
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--------------------- 248
+F + G + D + L+ C + VA+ F+
Sbjct: 523 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 582
Query: 249 ---------------EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
EK++ DI NII++G C V +A + + +P
Sbjct: 583 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 642
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY + L KKG L A LF+ M E G PD T N +I A ++++++ E+
Sbjct: 643 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 702
Query: 354 KNRGCLPNVTTYNSLIKHL 372
K G + +T +I L
Sbjct: 703 KRCGFSVDASTIKMVIDML 721
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 189/438 (43%), Gaps = 62/438 (14%)
Query: 114 NQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV 173
++C L + + + NV NR R + A F + R G YSP +N ++ L R
Sbjct: 103 DRCTLNILLNCLCNV-NRLREGFAA----FAGILRRG-YSPNIVTYNTLIKGLCMEHRIS 156
Query: 174 ELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDR------RKEFGELD 221
E ++F M PD+V TYG L+ + A+ + R E
Sbjct: 157 EATRLFLRMQKLGCTPDVV---TYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKP 213
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFW 280
++ + ++ LC+ + A+ FE K + I + N +++G+C G E+KR
Sbjct: 214 NVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLL 273
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+++ +PD VT+ ++ L K+GK+ A +L M E G PD+VT N +I+ C
Sbjct: 274 DEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMV 333
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
+ A E+ M ++GC P+V +YN LI K ++E + +EM PN I
Sbjct: 334 GDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKR--PNVI 391
Query: 401 TFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC----------- 446
T++ LLK + K ++ + M+ +G ++ TY + L DC
Sbjct: 392 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 451
Query: 447 ---------------------EDKVRHTWEEMEK---KGMGPDQRSYTVMIHGLYDKGRL 482
K+ WE EK +G P+ +YT+MIHG +G++
Sbjct: 452 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 511
Query: 483 EDALSYFHEMRLKGMVPE 500
+ A +M G P+
Sbjct: 512 DKANVLIQKMEANGCTPD 529
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 178/377 (47%), Gaps = 18/377 (4%)
Query: 146 VSR-EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRY 198
+SR E + P +N I+D L + R E Q+F+EM P ++ +Y L++ +
Sbjct: 204 ISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSII---SYNSLIHGF 260
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDI 257
A EE+ + D + G D+ F L+ LC+ K +E + ++ D+
Sbjct: 261 CCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDL 320
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T N ++ G+C++G++ A+ + + CEPD ++Y +N +K K+ A++L+
Sbjct: 321 VTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE 380
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M G++P+V+T + ++ + ++ +A ++ MK G N TY + LCK
Sbjct: 381 MLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCK--- 437
Query: 378 METVYEYLDEMEQKNGSCLPNEI-TFNYLLKSLKKPE--EVPW-VLERMERNGCKMSTDT 433
+ ++E + + S EI N L+ L K E W + E++ G + + T
Sbjct: 438 NDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVT 497
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y +++ + DK ++ME G PD +Y ++ G Y+ +LE+ + H M
Sbjct: 498 YTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMA 557
Query: 494 LKGMVPEPRTGILVNDM 510
K + P+ T +V DM
Sbjct: 558 QKDVSPDAITCSIVVDM 574
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 7/252 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
+ + N +L+G + + + + + S D T +N L +L F
Sbjct: 68 SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAF 127
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ +G P++VT N +I LC + RI EA + M+ GC P+V TY +LIK LC
Sbjct: 128 AGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGT 187
Query: 376 KRMETVY----EYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCK 428
+ E L+++ + +C PN IT+N ++ L K +E + E M+ G
Sbjct: 188 GNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMI 247
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
S +YN ++ + ++ + +EM +G+ PD ++ V+I L +G++ +A
Sbjct: 248 PSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 307
Query: 489 FHEMRLKGMVPE 500
M G+VP+
Sbjct: 308 LGVMIESGIVPD 319
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 15/248 (6%)
Query: 268 CVLGNVY--EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C GNV A F+ +++S P ++ ++ L K L+ M G
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D T N +++ LC R+ E + RG PN+ TYN+LIK LC R+
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
Query: 386 DEMEQKNGSCLPNEITFNYLLK----------SLKKPEEVPWVLERMERNGCKMSTDTYN 435
M QK G C P+ +T+ L+K +LK +E+ + R E N CK + TYN
Sbjct: 163 LRM-QKLG-CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEIN-CKPNVITYN 219
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+I+ ED+ + +EEM+ +GM P SY +IHG G+ E++ EM +
Sbjct: 220 IIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQ 279
Query: 496 GMVPEPRT 503
G+ P+ T
Sbjct: 280 GLQPDMVT 287
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 127/243 (52%), Gaps = 6/243 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD++ +Y +L+N Y+ VEEA+ +++ G+ ++ + +LL + V+ A
Sbjct: 353 PDVI---SYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDA 409
Query: 243 ETFFESEK-NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ F K + + T I L+G C ++EA + + ++ S + + ++
Sbjct: 410 KKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDG 469
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K GKL TA LF+ + +G +P+VVT +I C + ++ +A ++++M+ GC P+
Sbjct: 470 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 529
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER 421
+ TYN+L++ + ++E V + L M QK+ S P+ IT + ++ L K E+ L
Sbjct: 530 IITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS--PDAITCSIVVDMLSKDEKYQECLHL 587
Query: 422 MER 424
+ R
Sbjct: 588 LPR 590
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 163/345 (47%), Gaps = 12/345 (3%)
Query: 166 LGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
+G R ++L++ ++ PD+V Y +++ +V+EA ++ G D
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVV---MYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPD 184
Query: 223 LSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ + L+ C + E E +I T N +++ C G V E+K
Sbjct: 185 VITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLA 244
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+ K +PD V Y+ ++ G++ A ++F M + G PDV + N II+ LC K
Sbjct: 245 VMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGK 304
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
R+ EA+ +LREM ++ +P+ TY+SLI LCK+ R+ T+ + EM + N +T
Sbjct: 305 RVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQP--ANLVT 362
Query: 402 FNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
+N LL L K + + + +M+ G + + TY ++ K + ++ +
Sbjct: 363 YNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLL 422
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
KG D +YTVMI GL +G ++AL+ +M G +P T
Sbjct: 423 VKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVT 467
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 152/318 (47%), Gaps = 8/318 (2%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
+G +L I + + + G + DL L+ C + + + +
Sbjct: 13 FGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVL-GKI 71
Query: 251 NEFGYDIKT--MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ GY T +N ++ G C+ G V ++ F ++ + D V+Y +N L K G+
Sbjct: 72 LKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGET 131
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A++L + + ++ +PDVV + IID LC K + EA ++ EM RG P+V TY +L
Sbjct: 132 RCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTL 191
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN 425
I C ++ + L+EM KN + PN T+N L+ +L K +E +L M +
Sbjct: 192 ICGFCLAGQLMEAFGLLNEMILKNIN--PNIYTYNTLIDTLCKEGKVKESKNLLAVMTKK 249
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G K Y++++ Y K + + M + G+ PD SY ++I+GL R+++A
Sbjct: 250 GVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEA 309
Query: 486 LSYFHEMRLKGMVPEPRT 503
++ EM K M+P+ T
Sbjct: 310 MNLLREMLHKNMIPDTVT 327
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 169/356 (47%), Gaps = 15/356 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +++ I+D L + + E ++ EM PD++ TY L+ + A + EA
Sbjct: 148 PDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI---TYTTLICGFCLAGQLMEA 204
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNG 266
G+ + ++ + L+ LC+ V+ ++ K D+ +I+++G
Sbjct: 205 FGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDG 264
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C++G V +AK+ + ++++ PD +Y +N L K ++ A+ L + M K PD
Sbjct: 265 YCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPD 324
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VT + +ID LC RI L++ +EM +RG N+ TYNSL+ LCK + ++
Sbjct: 325 TVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFM 384
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVN 443
+M+++ PN+ T+ L+ L K + + + + G + TY V++
Sbjct: 385 KMKERGIQ--PNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCK 442
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ +ME G P+ ++ ++I L +K + A HEM KG++P
Sbjct: 443 EGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 5/217 (2%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P + + + +L K T + L + M KG PD+VT + +I+ C ++ + V
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
L ++ G PN N+L+K LC ++ + D++ + +++++ LL L
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQM--DQVSYGILLNGL 125
Query: 410 KKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K E +L +E + Y+ I+ D+ + EM +G+ PD
Sbjct: 126 CKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDV 185
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+YT +I G G+L +A +EM LK + P T
Sbjct: 186 ITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYT 222
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 20/220 (9%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P +N I++ L + +R E + + EM PD V TY L++ +
Sbjct: 287 NPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTV---TYSSLIDGLCKLGRITT 343
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK------NEFGYDIKTM 260
+ + G+ +L + +LL LC+ ++++ A F K N++ Y
Sbjct: 344 ILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY----- 398
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+++G C G + + + ++ ++ D TY ++ L K+G AL + M +
Sbjct: 399 TALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMED 458
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
G P+ VT II +L K +A ++L EM +G LP
Sbjct: 459 NGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 161/369 (43%), Gaps = 24/369 (6%)
Query: 150 GDYSPGSNVFNAILD------VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHM 203
G P +N ++D +L A + ++ +PD E TY L+N
Sbjct: 315 GGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPD---EFTYCSLINGLCQNDE 371
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNI 262
++ A+ +F+ G + + L+ LC+ + + + E +N DI T N+
Sbjct: 372 IDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNL 431
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++NG C +G V +A D I PD T+ T ++ K+ K+ T +++ MW G
Sbjct: 432 VINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHG 491
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDV+T N +++ L + + +E M +GC+PN TYN L + LCK ++
Sbjct: 492 VTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEAL 551
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNG----CKMSTDTYNVIL 438
+ +DE+ K + P+ ++F ++ ++ + R G +T TYN++
Sbjct: 552 DLVDEILNKGIT--PDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIM- 608
Query: 439 KLYVNWDCEDKVRHTWE----EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+N E H E EM G PD +Y VMI G G + + EM
Sbjct: 609 ---INAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIE 665
Query: 495 KGMVPEPRT 503
KG +P T
Sbjct: 666 KGFIPSLTT 674
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 155/369 (42%), Gaps = 39/369 (10%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILL 195
AY F + R G + P + FN +L L G + L+ + N T+ I +
Sbjct: 200 AYELFNDMLRIGIF-PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFI 258
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FG 254
M+ A+ + D G D+ + L+ LC+ +V AE + N
Sbjct: 259 QGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLE 318
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D T N +++G+C +G + A++ + I PD TY + +N L + ++ AL L
Sbjct: 319 PDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALAL 378
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F A KG KP V+ N +I LC + I +AL+++ EM GC ++ TYN +I LCK
Sbjct: 379 FNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCK 438
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTY 434
+ + +++ K +P+ TFN L+ D Y
Sbjct: 439 MGCVSDANNLMNDAIAK--GYVPDVFTFNTLI-------------------------DGY 471
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
LK+ + +M G+ PD +Y +++GL + ED + F M
Sbjct: 472 CKQLKM-------ETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVE 524
Query: 495 KGMVPEPRT 503
KG VP T
Sbjct: 525 KGCVPNKIT 533
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 164/396 (41%), Gaps = 46/396 (11%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK----TYGILLNRYAAAHMVEE 206
D S V+ + GR + E + VF+ M D N + +Y ++N + ++
Sbjct: 71 DNSLLEGVYIGAMKSYGRKGKVQEAVDVFERM-DFYNCEPSVLSYNAIMNILVESGYFKQ 129
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYK-----------------------HVEVAE 243
A VF R K G + D+ F + CR K + V
Sbjct: 130 AHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVA 189
Query: 244 TFFESEKNEFGY-------------DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
F+E Y D+ T N +L+ C G V E++R ++K
Sbjct: 190 GFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCS 249
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+ T+ F+ L +KG L A+ + ++ +G PDVVT N +I LC + EA + L
Sbjct: 250 NLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYL 309
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
++ N G P+ TYN+LI CK+ ++ + L K +P+E T+ L+ L
Sbjct: 310 HKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICK--GFVPDEFTYCSLINGLC 367
Query: 411 KPEEVPWVLERMER---NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+ +E+ L G K + YN+++K + EM + G D
Sbjct: 368 QNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIW 427
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+Y ++I+GL G + DA + ++ KG VP+ T
Sbjct: 428 TYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFT 463
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P +N++L+ L +A + +L++ F+ M + + N+ TY IL A V EA+
Sbjct: 493 TPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALD 552
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDIKTMNIILNGW 267
+ D G D +F ++ ++ A F E+ + + T NI++N +
Sbjct: 553 LVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAF 612
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
+++ ++ + ++ C PD+ TY ++ G + + M EKG P +
Sbjct: 613 AEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSL 672
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
T +I+ LC + R+ EA++++ M + G +P V
Sbjct: 673 TTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 14/243 (5%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
Y P FN ++D + + IQ+ ++M PD++ TY +LN + A E
Sbjct: 457 YVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVI---TYNSVLNGLSKAVKNE 513
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIIL 264
+ + F+ E G + + + L LC+ V A + N+ D + I+
Sbjct: 514 DLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATII 573
Query: 265 NGWCVLGNVYEAKRFWKDIIKS-KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+G+ G++ A + ++ + + K + TY +NA +K L +LF M G
Sbjct: 574 SGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGC 633
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD T +ID C + L EM +G +P++TT+ +I LC R V+E
Sbjct: 634 APDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHR---VHE 690
Query: 384 YLD 386
+D
Sbjct: 691 AVD 693
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 194/410 (47%), Gaps = 49/410 (11%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV-- 186
++E A F W+ +EG + P ++ +++ L + + + +++FDEM PD+
Sbjct: 164 EFEKARGFLNWMWKEG-FKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCY 222
Query: 187 -------------------------------NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
N KT+ I+++ + V++ + ++DR K
Sbjct: 223 NILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMK 282
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWCVLGNV 273
+ DL + +L+ LC +V+ AE+ F E+ F D+ T N +L G+C G +
Sbjct: 283 QNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAF-IDVVTYNTMLGGFCRCGKI 341
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
E+ W+ I++ + + V+Y + L + GK+ A +++ M KG D T
Sbjct: 342 KESLELWR-IMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIF 400
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I LC + +AL V++E++++G +V Y S+I LCK +R+E + EM K+G
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEM-SKHG 459
Query: 394 SCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
L + + N L+ L + + ++ M +NGC + +YN+++ +
Sbjct: 460 VELNSHVC-NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEA 518
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+EM + G+ PD ++Y++++ GL ++E AL +H+ G+ P+
Sbjct: 519 SAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPD 568
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 172/407 (42%), Gaps = 55/407 (13%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRAR------RFVELIQV----FDEMPDLVN 187
AA+ F +R Y+ + V++ IL L AR R VELI+ DE L
Sbjct: 25 AAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSV 84
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKE-FGELDDLSAFQNLLLWLCRYKH-VEVAETF 245
KTYG M + A+ VF R +E FG + ++ LL K V+V F
Sbjct: 85 IKTYG-------KNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLF 137
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E +++T N+++ C +A+ F + K +PD +Y+T +N L K
Sbjct: 138 AYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKT 197
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL-REMKNRGCLPNVTT 364
GKL AL LF M E+ PDV N +ID +K A+++ + +++ PNV T
Sbjct: 198 GKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKT 257
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQK-------------NGSC---------------- 395
+N +I L K R++ + D M+Q +G C
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELV 317
Query: 396 ----LPNEITFNYLLKSLKKPEEVPWVLE--RMERNGCKMSTDTYNVILKLYVNWDCEDK 449
+ +T+N +L + ++ LE R+ ++ +YN+++K + D+
Sbjct: 318 ERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNILIKGLLENGKIDE 377
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
W M KG D +Y + IHGL G + AL E+ KG
Sbjct: 378 ATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKG 424
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 146/349 (41%), Gaps = 38/349 (10%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N ++ L + E ++ MP + TYGI ++ V +A+GV +
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVY 274
G D+ A+ +++ LC+ + +E A E K+ + N ++ G +
Sbjct: 422 SKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLS 481
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + + K+ C P V+Y + L + GK G A + M E G KPD+ T + ++
Sbjct: 482 DASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILL 541
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
LC ++I ALE+ + G P+V +N LI LC + +++ + ME +N
Sbjct: 542 GGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN-- 599
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
C N +T+N L++ K + ++ W
Sbjct: 600 CTANLVTYNTLMEGYFKVRD--------------------------------SNRATVIW 627
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
M K G+ PD SY ++ GL R+ A+ +F + R G+ P T
Sbjct: 628 GYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYT 676
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 5/238 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE---LIQVFDEMPDLVNEKTYGI 193
E A K +S+ G S+V NA++ L R R + L++ + L +Y I
Sbjct: 446 EEASNLVKEMSKHG-VELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNI 504
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNE 252
L+ A EA E G DL + LL LCR + +E+A E + + ++
Sbjct: 505 LICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSG 564
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D+ NI+++G C +G + +A ++ C + VTY T + K A
Sbjct: 565 LEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRAT 624
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
++ M++ G +PD+++ N I+ LC R+ A+E + +N G P V T+N L++
Sbjct: 625 VIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVR 682
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 112/266 (42%), Gaps = 26/266 (9%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF 217
+ +I+D L + RR E + EM +G+ LN +H+ IG R
Sbjct: 431 AYASIIDCLCKKRRLEEASNLVKEM------SKHGVELN----SHVCNALIGGLIRDSRL 480
Query: 218 -------------GELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
G L + ++ L+ LC A F E +N D+KT +I+
Sbjct: 481 SDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSIL 540
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L G C + A W ++S EPD + + ++ L GKL A+ + M +
Sbjct: 541 LGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
++VT N +++ + A + M G P++ +YN+++K LC R+ E
Sbjct: 601 TANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIE 660
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL 409
+ D + +N P T+N L++++
Sbjct: 661 FFD--DARNHGIFPTVYTWNILVRAV 684
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 10/195 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N ++ L A +F E EM PDL KTY ILL +E A
Sbjct: 497 PTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDL---KTYSILLGGLCRDRKIELA 553
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNG 266
+ ++ + + G D+ L+ LC ++ A T + E ++ T N ++ G
Sbjct: 554 LELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ + + A W + K +PD ++Y T + L ++ A+ F G P
Sbjct: 614 YFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPT 673
Query: 327 VVTCNCIIDALCFKK 341
V T N ++ A+ +K
Sbjct: 674 VYTWNILVRAVVNRK 688
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 163/354 (46%), Gaps = 9/354 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + I+ L + R E + +F EM + N TY +L+ ++A +
Sbjct: 307 PTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKI 366
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYK-HVEVAETFFESEKNEFGYDIKTMNIILNGWCV 269
+ E G + + + L+ C+ E E N + +T N ++ G+C
Sbjct: 367 LNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCR 426
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
N+++A +++ K +P+ VTY ++ K+G LG+A +L M E G PD T
Sbjct: 427 GKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWT 486
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ ID LC + + EA + +K +G N Y++LI CK+ ++ LD+M
Sbjct: 487 YSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKM- 545
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ C+PN IT+N L+ K +E +++ M + + + DTY +++ + D
Sbjct: 546 -LSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDE 604
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D+ +++M G PD YT IH GRL+DA +M KG++P+
Sbjct: 605 FDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPD 658
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 163/387 (42%), Gaps = 44/387 (11%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N +L +L R E+ V+ EM D + N T ++N Y V EA +
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE------KNEFGYD------------- 256
+ G D + +L+L CR K+V+ A F S +NE Y
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291
Query: 257 -----------------IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
++T +I+ C LG EA +K++ + C+P+ TY +
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+L + A ++ M EKG P VVT N +ID C K ALE+L M++ C
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW-- 417
PN TYN LI C+ K + L +M ++ PN +T+N L+ K ++
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQ--PNVVTYNILIHGQCKEGDLGSAY 469
Query: 418 -VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
+L M +G TY+V + ++ R +E +++KG+ ++ Y+ +I G
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGY 529
Query: 477 YDKGRLEDALSYFHEMRLKGMVPEPRT 503
G++ D +M G VP T
Sbjct: 530 CKVGKVSDGRFLLDKMLSAGCVPNSIT 556
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 167/383 (43%), Gaps = 16/383 (4%)
Query: 126 VNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL 185
++ + D + A FF W+ ++ + ++L++L +++ + M L
Sbjct: 80 ISALFALNLDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGY----LRIAENMRIL 135
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHV-EVAE 243
+ + T + A V E + +RR + + L + LL+ L R+ + E+
Sbjct: 136 MIKST-----DSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKS 190
Query: 244 TFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
+ E + +I T+N ++NG+C LGNV EA+ + I+++ D+ TY + +
Sbjct: 191 VYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYC 250
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
+ + A +F +M KG + V+ +I C +R+ EAL++ +M C P V
Sbjct: 251 RNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVR 310
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLE 420
TY +I LC++ R EM +K+ C PN T+ L+ SL + ++ +L
Sbjct: 311 TYTVIIFALCQLGRKTEALNMFKEMTEKH--CQPNVHTYTVLICSLCEDSNFDDAKKILN 368
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
M G S TYN ++ Y ME P+ R+Y +I G
Sbjct: 369 GMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGK 428
Query: 481 RLEDALSYFHEMRLKGMVPEPRT 503
+ A+S H+M + + P T
Sbjct: 429 NIHKAMSLLHKMLERKLQPNVVT 451
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 139/390 (35%), Gaps = 69/390 (17%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
LG A + + L+ +PD E TY + ++ +VEEA +F+ KE G +
Sbjct: 465 LGSAYKLLSLMNESGLVPD---EWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVI 521
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ C+ V + + + T N +++G+C N EA+ +I
Sbjct: 522 YSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMI 581
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K EP + TY ++ L K + A +F M G PDV I A C R+
Sbjct: 582 KRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLK 641
Query: 345 EA-----------------------------------LEVLREMKNRGCLPNVTTYNSLI 369
+A +L+ M GC P+ TY+ LI
Sbjct: 642 DAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLI 701
Query: 370 KHLCKIKRMETV-------------------------YEYLDEMEQKNG--SCLPNEITF 402
KHL K E YE+ ++ K C PN T+
Sbjct: 702 KHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTY 761
Query: 403 NYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
+ L K E + + M+ G + D YN +L + + M +
Sbjct: 762 GKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIE 821
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
P S +++ GLYD+G E A F
Sbjct: 822 NRHLPHLDSCKLLLCGLYDEGNDEKAKRVF 851
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 133/335 (39%), Gaps = 42/335 (12%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFD 180
LI N++ FD A+ F + G + P ++ A + GR + LI +
Sbjct: 595 LIDNLLKDDEFD--QAHDMFDQMLSTGSH-PDVFIYTAFIHAYCSHGRLKDAEVLICKMN 651
Query: 181 EMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
+ + Y + ++ Y ++ A G+ R E G + L+ L K E
Sbjct: 652 AKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKE 711
Query: 241 VAETFFES------EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
V+ + S N+F N W + + F K + + C P++ T
Sbjct: 712 VSSSSELSDLSSGVASNDFS----------NCWRRVDYEFTLDLFGK-MAEHGCAPNANT 760
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y F+ L K G L A RLF M EKG+ P+ N ++ C EA+ L M
Sbjct: 761 YGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMI 820
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY-------LLK 407
LP++ + CK+ + +Y+ ++ + K C + +NY L+
Sbjct: 821 ENRHLPHLDS--------CKL-LLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLID 871
Query: 408 SLKK---PEEVPWVLERMERNGCKMSTDTYNVILK 439
L K ++ + ME GC++ TY+++++
Sbjct: 872 GLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIE 906
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 11/181 (6%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK------NEFGYDIK 258
E + +F + E G + + + + LC+ +EVA F+ K NE Y
Sbjct: 740 EFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIY--- 796
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
N +L C LG EA R+ +I+++ P + + L +G A R+F +
Sbjct: 797 --NSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSF 854
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
+ D + +ID L K + ++ M+ +GC + TY+ LI+ I+ +
Sbjct: 855 LQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEI 914
Query: 379 E 379
+
Sbjct: 915 D 915
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 171/352 (48%), Gaps = 17/352 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N ++D L + +F +M PD+V TY L++ + +++E I +F+
Sbjct: 258 YNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIV---TYNSLIDGHGKLGLLDECICIFE 314
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLG 271
+ K+ D+ + L+ C+++ + A F E + N ++ T + ++ +C G
Sbjct: 315 QMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEG 374
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ EA +F+ D+ + P+ TY + ++A K G L AL+L + + + G K +VVT
Sbjct: 375 MLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYT 434
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
++D LC + R+ EA EV R M N G PN TY +L+ K K ME + L EM++K
Sbjct: 435 ALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 494
Query: 392 NGSCL-PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
C+ P+ + + +L L + EE ++ ++ +G + Y ++ Y
Sbjct: 495 ---CIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 551
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ EEM G+ + +Y +I GL G +++A+ +F M G+ P
Sbjct: 552 TEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQP 603
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 172/396 (43%), Gaps = 21/396 (5%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNE-KTYGI 193
D A FF+W + S + ++ +L AR + + V E+ L ++ +
Sbjct: 111 DARLALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSWDV 170
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
+A ++ GVFD F L +L + E +E F + K
Sbjct: 171 FDLLWATRNVCVPGFGVFDAL--FSALIELGMLE------------EASECFLKMRKFRV 216
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
++ N +L+ +G +++F+KD+ + + TY ++ L K+G L A
Sbjct: 217 FPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARS 276
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
LF M E G PD+VT N +ID + E + + +MK+ C P+V TYN+LI C
Sbjct: 277 LFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFC 336
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMS 430
K +RM +E+L EM K PN +T++ + + K +E M R +
Sbjct: 337 KFERMPKAFEFLHEM--KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN 394
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TY ++ + EE+ + G+ + +YT ++ GL ++GR+++A F
Sbjct: 395 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 454
Query: 491 EMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK 526
M G+ P T + IK KE E K ++K
Sbjct: 455 AMLNAGVAPNQETYTALVHGFIKAKEM-EYAKDILK 489
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 155/353 (43%), Gaps = 9/353 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
+P + +++D +A E +++ +E+ +N TY LL+ ++EA
Sbjct: 392 TPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEE 451
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWC 268
VF G + + L+ + K +E A+ + K + D+ IL G C
Sbjct: 452 VFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLC 511
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+ EAK +I +S ++V Y T ++A K G+ AL L + M + G V
Sbjct: 512 NESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEV 571
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +ID LC + EA+ M G PNV Y +L+ LCK E + DEM
Sbjct: 572 TYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEM 631
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWD 445
K +P++I + L+ K + L +RM G ++ Y ++ +
Sbjct: 632 LDKG--MMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSG 689
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
K R+ +EM KG+ PD+ Y +I Y G++++AL +EM +GM+
Sbjct: 690 QVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 182/449 (40%), Gaps = 92/449 (20%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D E A + F + +E ++P +N+++D G+ E I +F++M PD++
Sbjct: 270 DLEMARSLFTQM-KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVI-- 326
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY L+N + + +A K G ++ + + C+ ++ A FF
Sbjct: 327 -TYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVD 385
Query: 249 EK------NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
+ NEF Y +++ C GN+ EA + ++I+++ + + VTY ++ L
Sbjct: 386 MRRVALTPNEFTY-----TSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 440
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
++G++ A +F+AM G P+ T ++ K + A ++L+EMK + P++
Sbjct: 441 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 500
Query: 363 TTYNSLIKHLCKIKRME------------------TVYEYLDEMEQKNGSC--------- 395
Y +++ LC R+E +Y L + K+G
Sbjct: 501 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 560
Query: 396 ------LPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ E+T+ L+ L K +E RM G + + Y ++ +C
Sbjct: 561 MLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNC 620
Query: 447 EDKVRHTWEEMEKKGMGPDQ-----------------------------------RSYTV 471
+ + ++EM KGM PD+ +YT
Sbjct: 621 FEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTA 680
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+I GL G+++ A + EM KG++P+
Sbjct: 681 LIWGLSHSGQVQKARNLLDEMIGKGVLPD 709
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 137/335 (40%), Gaps = 37/335 (11%)
Query: 229 LLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI----- 283
+L+ LC + +A FFE K G+ + +C+L ++ RF+ D
Sbjct: 104 VLVELC--QDARLALRFFEWAKGRIGFQHTS-----EAYCILVHILFCARFYSDANAVLK 156
Query: 284 --------------------IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ C P + +AL + G L A F M +
Sbjct: 157 ELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRV 216
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P +CN ++ L R + + ++M G +V TYN +I +LCK +E
Sbjct: 217 FPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARS 276
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
+M++ + P+ +T+N L+ L +E + E+M+ C TYN ++
Sbjct: 277 LFTQMKEAGFT--PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINC 334
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ ++ K EM+ G+ P+ +Y+ I +G L++A+ +F +MR + P
Sbjct: 335 FCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN 394
Query: 501 PRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
T + D N K E K V ++ G+K N
Sbjct: 395 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLN 429
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 4/222 (1%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMV 204
+E + + ++ ++D ++ + E + + +EM DL E TY L++ + +V
Sbjct: 527 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLV 586
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNII 263
+EA+ F R E G +++ + L+ LC+ EVA+ F+ ++ D +
Sbjct: 587 QEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTAL 646
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++G GN+ EA +I+ E D Y + L+ G++ A L M KG
Sbjct: 647 IDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGV 706
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
PD V C+I ++ EALE+ EM RG + ++ +
Sbjct: 707 LPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDH 748
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 164/353 (46%), Gaps = 17/353 (4%)
Query: 157 NVFNAI---LDVLGRAR---RFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
N FN + L LGR R R V+ + MP +V TYG LL +EA +
Sbjct: 248 NTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVV---TYGFLLQGLCRTRQADEACAM 304
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
R E + + + L K E + D+ T +I+++G C L
Sbjct: 305 LGRLPEVNVVMLNTVIRG---CLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKL 361
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G A R ++ + C P+ VTY+T +++ + G A + M KG +
Sbjct: 362 GRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGY 421
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N II ALC ++ +A +++EMK++GC P++ TYN++I HLC ME + +
Sbjct: 422 NGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIE 481
Query: 391 KNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ + N IT+N L+ +L + +E + M +GC++ +YN ++K
Sbjct: 482 E--GVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNV 539
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D+ EEM KG+ P+ SY ++I+ L G++ DAL EM +G+ P+
Sbjct: 540 DRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPD 592
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 118/245 (48%), Gaps = 9/245 (3%)
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
++ N++L+ +A ++ +++ + P + T+ AL + G+ G AL L +
Sbjct: 143 RSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRG 202
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M G PD V +I AL + + EA +L EM GC +V T+N L+ LC + R
Sbjct: 203 MARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGR 262
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTY 434
+ +D M + C+P+ +T+ +LL+ L ++ +E +L R+ +++
Sbjct: 263 VREAARLVDRMMTQ--GCMPSVVTYGFLLQGLCRTRQADEACAMLGRLP----EVNVVML 316
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N +++ + + +E M KG PD +Y++++HGL GR A+ EM
Sbjct: 317 NTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEE 376
Query: 495 KGMVP 499
KG P
Sbjct: 377 KGCAP 381
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 32/274 (11%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T + C LG +A + + + C PD+V Y T ++AL +G + A L M
Sbjct: 179 TFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEM 238
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
G DV T N ++ LC R+ EA ++ M +GC+P+V TY L++ LC+ ++
Sbjct: 239 LLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQA 298
Query: 379 ETVYEYLDEMEQKN---------------------------GS--CLPNEITFNYLLKSL 409
+ L + + N GS C P+ T++ L+ L
Sbjct: 299 DEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGL 358
Query: 410 KKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K +L+ ME GC + TY+ +L + D R ++M KG +
Sbjct: 359 CKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNS 418
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ Y +I+ L G+L+ A EM+ +G P+
Sbjct: 419 QGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPD 452
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 148/349 (42%), Gaps = 10/349 (2%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L RA E++ PD+ TY IL++ A+ + D +E G ++
Sbjct: 329 LARATELYEMMGSKGCPPDV---HTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVT 385
Query: 226 FQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ LL CR + A + F + + N I+ C G + +A R +++
Sbjct: 386 YSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMK 445
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
C+PD TY T + L + A +F+ + E+G + +T N +I AL R
Sbjct: 446 SQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQ 505
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
E L + EM GC +V +YN LIK LCK ++ L+EM K PN ++N
Sbjct: 506 EGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIK--PNNFSYNM 563
Query: 405 LLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ L K +V LE M G TYN ++ + E++ +
Sbjct: 564 LINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN 623
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVND 509
+ PD +Y ++I L+DA + G+VP RT G++V +
Sbjct: 624 VHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQN 672
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 136/297 (45%), Gaps = 49/297 (16%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + ++ ++ L + RF +++ DEM P++V TY LL+ + M ++A
Sbjct: 346 PDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIV---TYSTLLHSFCRNGMWDDA 402
Query: 208 IGVFDR--RKEF-----------------GELD----------------DLSAFQNLLLW 232
+ D+ K F G+LD D+ + ++
Sbjct: 403 RAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYH 462
Query: 233 LCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
LC +E AE F + E+ I T N +++ G E R +++ C+
Sbjct: 463 LCNNDLMEEAEHIFRNLIEEGVVANGI-TYNTLIHALLRNGRWQEGLRLASEMLLHGCQL 521
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D ++Y + AL K+G + ++ L + M KG KP+ + N +I+ LC ++ +ALE+
Sbjct: 522 DVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELS 581
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+EM N+G P++ TYN+LI LCK+ L+++ +N P+ +T+N L+
Sbjct: 582 KEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVH--PDIVTYNILIS 636
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFES------EKNEFGYDIKTMNIILNGWCVLGNVYE 275
D+ ++ L+ LC+ +V+ + E + N F Y N+++N C G V +
Sbjct: 522 DVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSY-----NMLINELCKAGKVRD 576
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A K+++ PD VTY T +N L K G AL L + + + PD+VT N +I
Sbjct: 577 ALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 636
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
C + + +A +L + + G +PN T+ ++++ +
Sbjct: 637 WHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVR 675
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 178/393 (45%), Gaps = 51/393 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N +LD L + RF E+ +V++ M PD++ TYGIL++ + V+ A
Sbjct: 262 PNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVI---TYGILIHGLCRSGDVDGA 318
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
V+ + G + D + + +L+ C+ V+ A F++S +++T NI++ G
Sbjct: 319 ARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGL 378
Query: 268 CVLGNVYEAKRFWKDIIKS-KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
G V EA W + K C PD+VT+ T ++ L + G A +F+ G++ D
Sbjct: 379 FDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLD 438
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V + + +I+ LC R+ +A++V +M GC PN YN+LI C++ R
Sbjct: 439 VFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS 498
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILK---- 439
+M NG C P IT+N L+ L K E E V M NG TY +++
Sbjct: 499 KMAD-NG-CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFS 556
Query: 440 ---------------------------LYVNWDCE----DKVRHTWEEM-EKKGMGPDQR 467
+ ++ C D+ H + +M EKK P+
Sbjct: 557 DKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLV 616
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+Y ++ GLY+ G ++ A + + + G+ P+
Sbjct: 617 TYNTLMDGLYETGYIDKAATLWTSITEDGLEPD 649
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 166/350 (47%), Gaps = 6/350 (1%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDE--MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
+ ++N+++ +A R E + +D L N +TY I++ + MV+EAI ++D
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDL 393
Query: 214 -RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCVLG 271
K+ + D F L+ LC+ A T FE + + D+ + + ++NG C +G
Sbjct: 394 LEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVG 453
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ +A + ++ + K C+P+S Y ++ + + A+R++ M + G P V+T N
Sbjct: 454 RLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYN 513
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+ID LC ++ EA V REM G P++TTY SLI+ L K+++ ++ K
Sbjct: 514 TLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYK 573
Query: 392 N--GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
+ + I + L + K E + + E+ C + TYN ++ DK
Sbjct: 574 GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDK 633
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
W + + G+ PD SY I GL R+ + + E+ +G++P
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIP 683
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 161/376 (42%), Gaps = 16/376 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-------LVNEK 189
+AA F+ + +PG NA+LD RARRF + F + N +
Sbjct: 100 DAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQ 159
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
TY I+L A ++ A+ +FD + D + L+ L + ++ A + E
Sbjct: 160 TYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEM 219
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGK 307
++ D+ N +L G G + R W ++K P+ TY ++ L K G+
Sbjct: 220 PRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGR 279
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+++ M +PDV+T +I LC + A V E+ G + + YNS
Sbjct: 280 FKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNS 339
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMER 424
L+K C+ R++ +++ D + L N T+N ++K L V +E +E+
Sbjct: 340 LVKGFCQAGRVQEAWKFWD---SAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEK 396
Query: 425 N-GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+ C T T+ ++ +K +EE G D SY+ MI+GL + GRL
Sbjct: 397 DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLV 456
Query: 484 DALSYFHEMRLKGMVP 499
DA+ + +M G P
Sbjct: 457 DAVKVYEKMDKDGCKP 472
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 117/226 (51%), Gaps = 5/226 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P S+++NA++ + R + ++++ +M D TY L++ A +EA V
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSV 531
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCV 269
E G D++ + +L+ L K ++ A + ++ D+ NI+++G C
Sbjct: 532 AREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCS 591
Query: 270 LGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G V EA + D+ + K C P+ VTY T ++ L + G + A L+ ++ E G +PD++
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDII 651
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+ N I LC RI E +++L E+ +RG +P V T+N L++ + K
Sbjct: 652 SYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 12/222 (5%)
Query: 299 VNALTKKGKLGTALRLFQAMWE-KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN-- 355
++A ++ AL F+A+ G P + + N ++DA +R +A + +
Sbjct: 90 LSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGA 149
Query: 356 --RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
R PN+ TYN +++ LC ++ D + ++ + P+ IT++ L+ L K +
Sbjct: 150 FGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVA--PDRITYSTLMCGLAKQD 207
Query: 414 EVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSY 469
+ +L+ M R+ + YN +L +KV W+++ K G P+ +Y
Sbjct: 208 RLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
VM+ GL GR ++ + M + P+ T GIL++ +
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 149/325 (45%), Gaps = 9/325 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD + TYG ++ R +++A+ + G D + +L LC+ + VE A
Sbjct: 7 PDAL---TYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEA 63
Query: 243 ETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
FE K ++ T N ++NG C + A +K++ P V+Y T ++
Sbjct: 64 RLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDG 123
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
KK L A +F M P+VVT +ID L ++ A EVL M +G PN
Sbjct: 124 FCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPN 183
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V TY+ LI CK++R++ ++ L++M + + P +T+N LL SL K E+ +
Sbjct: 184 VATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIA--PTVVTYNILLNSLCRADKLEDAFKL 241
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
M + C + TYN +L+ + D + EM KG PD +Y + GL
Sbjct: 242 FRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTR 301
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRT 503
G++ +A +M+L P R+
Sbjct: 302 AGKVHEAQELMEKMKLTKRNPFGRS 326
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 123/257 (47%), Gaps = 6/257 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
EA F K V + +P +N +++ L +A R ++F EM + E +Y
Sbjct: 62 EARLLFEKMVKQR--INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNT 119
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNE 252
L++ + + A VFD+ + ++ + L+ L + V+ A + K
Sbjct: 120 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 179
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
++ T + +++G+C + V EA + + ++ P VTY +N+L + KL A
Sbjct: 180 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAF 239
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+LF+ M ++ P VVT N ++ ALC K++ A + EM +GC P+ TY++L L
Sbjct: 240 KLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGL 299
Query: 373 CKIKRMETVYEYLDEME 389
+ ++ E +++M+
Sbjct: 300 TRAGKVHEAQELMEKMK 316
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 40/246 (16%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD++TY V L K ++ AL + M +G KPD N ++ LC ++++ EA +
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+M + PNV TYN+LI LCK R+ET YE EM K +P E+++N L+
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKG--YVPTEVSYNTLIDGF 124
Query: 410 KKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K +++ V ++M R+ C P+
Sbjct: 125 CKKKDLVAAKDVFDKMVRSNCV-----------------------------------PNV 149
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK 526
+YT +I GL G+++ A M KG+ P T + D K++ E K + +
Sbjct: 150 VTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQ 209
Query: 527 LTSLGL 532
+ + G+
Sbjct: 210 MVTQGI 215
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 46/231 (19%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E AY FK ++ +G Y P +N ++D + + V VFD+M P++V T
Sbjct: 96 ETAYELFKEMAGKG-YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVV---T 151
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y L++ + + V+ A V D + G +++ + L+ C+ + V+ A E
Sbjct: 152 YTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMV 211
Query: 251 NE-FGYDIKTMNIILNGWCVLGNVYEA--------------------------------- 276
+ + T NI+LN C + +A
Sbjct: 212 TQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLD 271
Query: 277 --KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
R + ++I C PD++TY T LT+ GK+ A L + M R P
Sbjct: 272 GAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 153/323 (47%), Gaps = 9/323 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
P +V T G LLN + + +EA+ + D FG + ++ + ++ LC+ + + A
Sbjct: 672 PSIV---TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 728
Query: 243 -ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
E F+ EK D T N +++G G +A R +D++K K +P+ + + ++
Sbjct: 729 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 788
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K+G L A L++ M + P+V T N +I+ C + +A + M ++GC P+
Sbjct: 789 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 848
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V TYN+LI CK KR+E + EM + + + T+N L+ K V
Sbjct: 849 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQ--GLVGDAFTYNTLIHGYCQAGKLNVAQKV 906
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
RM G TYN++L N +K E+++K M D +Y ++I GL
Sbjct: 907 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 966
Query: 479 KGRLEDALSYFHEMRLKGMVPEP 501
+L++A F + KG+ P+
Sbjct: 967 TDKLKEAWCLFRSLTRKGVKPDA 989
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 167/386 (43%), Gaps = 48/386 (12%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIGVFDRRK 215
F ++ R R + V +M L E T+G LL+ + + + +A +
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVY 274
+ G ++ + L+ LC+ + +A E E EK G D+ T N +L G C G
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A R +D++K PD VT+ ++ K+G L A L++ M + P+ VT N II
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK--- 391
+ LC R+ +A + M ++GC PNV TYN+LI CK + ++ + M +
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 392 ----------NGSC--------------------LPNEITFNYLLKSLKKPEEVPWVL-- 419
+G C P+ IT LL L E+ L
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 420 -ERMERNGCKMSTDTYNVILKLYVNWDCE-DKVRHTWE---EMEKKGMGPDQRSYTVMIH 474
+ M + + YN++ ++ C+ DKV WE + +G+ PD R+YT+MI
Sbjct: 409 FDDMRESEKYIGIVAYNIM----IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPE 500
GL G +A M+ +G++ +
Sbjct: 465 GLCKNGPRREADELIRRMKEEGIICQ 490
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 134/334 (40%), Gaps = 39/334 (11%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKTMNI 262
E+A +F L + F LL + E +F + +G +D+ + I
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETV-IYFSQKMELYGISHDLYSFTI 111
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++ +C + A ++K EP VT+ + ++ ++G A L M + G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+P+VV N +ID LC + ALE+L EM+ +G +V TYN+L+ LC R
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 383 EYLDEM---------------------------------EQKNGSCLPNEITFNYLLKSL 409
L +M E S PN +T+N ++ L
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 410 ---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
+ + + M GC + TYN ++ + + D+ ++ M +G D
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+Y +IHG G+L AL F M + + P+
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 130/303 (42%), Gaps = 6/303 (1%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNII 263
++A +F + + + F +L + + ++ + +N +D+ + I+
Sbjct: 586 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 645
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ +C + A ++K P VT + +N + + A+ L +M G
Sbjct: 646 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 705
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P+VV N +I+ LC + + ALEV M+ +G + TYN+LI L R
Sbjct: 706 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 765
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKL 440
L +M ++ PN I F L+ + K E + + M R + TYN ++
Sbjct: 766 LLRDMVKRKID--PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ C ++ ++ M KG PD +Y +I G R+ED + F EM +G+V +
Sbjct: 824 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883
Query: 501 PRT 503
T
Sbjct: 884 AFT 886
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 6/242 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGI 193
+AA V R+ D P F A++D + +E ++ EM + N TY
Sbjct: 762 DAARLLRDMVKRKID--PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 819
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNE 252
L+N + + +A +FD G D+ + L+ C+ K VE F E
Sbjct: 820 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 879
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D T N +++G+C G + A++ + ++ PD VTY ++ L GK+ AL
Sbjct: 880 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 939
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ + + + D++T N II LC ++ EA + R + +G P+ Y ++I L
Sbjct: 940 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 999
Query: 373 CK 374
C+
Sbjct: 1000 CR 1001
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 4/250 (1%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIG 209
+P F A++DV + E +++ EM N TY ++N + +A
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWC 268
FD G ++ + L+ C+++ V+ F+ E F DI T N +++G+C
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+G + A + ++ + PD +T+ ++ L G++ +AL F M E + +V
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
N +I LC ++ +A E+ + G P+ TY +I LCK E + M
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Query: 389 EQKNGSCLPN 398
+++ C N
Sbjct: 483 KEEGIICQMN 492
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 11/225 (4%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M + G +P +VT +++ C R EA+ ++ M G +PNV YN++I LCK +
Sbjct: 665 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 724
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV-LERMERNGCKMSTDT--- 433
+ E ME+K + +T+N L+ L W R+ R+ K D
Sbjct: 725 LNNALEVFYCMEKK--GIRADAVTYNTLISGLSNSGR--WTDAARLLRDMVKRKIDPNVI 780
Query: 434 -YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ ++ +V + R+ ++EM ++ + P+ +Y +I+G G L DA F M
Sbjct: 781 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 840
Query: 493 RLKGMVPEPRTGILVNDMNIKLKERGEQGKKVI-KLTSLGLKGNA 536
KG P+ T + K K R E G K+ ++T GL G+A
Sbjct: 841 VSKGCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTYQGLVGDA 884
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 37/255 (14%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + +++ S+ P V + + A + T + Q M G D+ + +I
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
C R+ AL VL +M G P++ T+ SL+ C + R+ + + M +
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
PN + +N L+ L K E+ LE +
Sbjct: 174 --PNVVVYNTLIDGLCKNGELNIALELLN------------------------------- 200
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK- 513
EMEKKG+G D +Y ++ GL GR DA +M + + P+ T + D+ +K
Sbjct: 201 -EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ 259
Query: 514 --LKERGEQGKKVIK 526
L E E K++I+
Sbjct: 260 GNLDEAQELYKEMIQ 274
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 7/197 (3%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
K A LF M + P +V ++ + + + + +M+N G ++ ++
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERME 423
LI C+ R+ L +M + P+ +T LL + +E +++ M+
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFR--PSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 701
Query: 424 RNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G + YN ++ L N D + + + MEKKG+ D +Y +I GL + GR
Sbjct: 702 GFGFVPNVVIYNTVINGLCKNRDLNNAL-EVFYCMEKKGIRADAVTYNTLISGLSNSGRW 760
Query: 483 EDALSYFHEMRLKGMVP 499
DA +M + + P
Sbjct: 761 TDAARLLRDMVKRKIDP 777
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 180/408 (44%), Gaps = 44/408 (10%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D A + + R+G P + +N ++ + RA R + ++VFDEM + L N TY
Sbjct: 179 DLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITY 238
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE---S 248
+++ + +E + D+ G + + LL LCR + + S
Sbjct: 239 NTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMAS 298
Query: 249 EK---NEFGYDI------------------------------KTMNIILNGWCVLGNVYE 275
+K + F Y I T +I+LNG C G V
Sbjct: 299 QKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSI 358
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A+ + ++ + P V Y T +N + G+L A F M + KPD +T N +I+
Sbjct: 359 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 418
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
LC +RI A ++L EM++ G P V T+N+LI + ++E + L EM Q+NG
Sbjct: 419 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM-QENG-L 476
Query: 396 LPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
PN +++ ++ + K ++P +L+ M + YN I+ YV D+
Sbjct: 477 KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFI 536
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
E+M+ G+ P +Y ++I GL ++ ++ +A + + ++P+
Sbjct: 537 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 584
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 162/376 (43%), Gaps = 10/376 (2%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D EA + + G P + +N +L L RA R E + DEM + + TY
Sbjct: 250 DLEAGFRLRDQMVCHG-LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 308
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
IL + + + + +F + + G LL LC+ V +AE +S N
Sbjct: 309 SILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 368
Query: 252 EFGYDIKTM-NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ + N ++NG+C G + A + + +PD +TY +N L K ++
Sbjct: 369 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 428
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L M + G P V T N +IDA ++ + VL EM+ G PNV +Y S++
Sbjct: 429 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 488
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--KKPEEVPWVL-ERMERNGC 427
CK ++ LD+M K+ LPN +N ++ + P + ++L E+M+ NG
Sbjct: 489 AFCKNGKIPEAVAILDDMFHKD--VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 546
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
S TYN+++K N + + + PD SY +I +G ++ AL
Sbjct: 547 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 606
Query: 488 YFHEMRLKGMVPEPRT 503
M G+ RT
Sbjct: 607 LQQRMHKYGIKSTVRT 622
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 131/312 (41%), Gaps = 31/312 (9%)
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-------------EKNEFGYDIK 258
D R+ FG L A + W + A E+ N F Y
Sbjct: 147 DVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY--- 203
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
N+++ G G +A + ++ + P+ +TY T ++ K G L RL M
Sbjct: 204 --NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 261
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK---I 375
G KP+ +T N ++ LC R+ E +L EM ++ +P+ TY+ L L +
Sbjct: 262 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 321
Query: 376 KRMETVY-EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMST 431
K M +++ +YL KNG + + T + LL L K +V VL+ + G +
Sbjct: 322 KAMLSLFGKYL-----KNGVTI-GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 375
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
YN ++ Y + T+ +M+ + + PD +Y +I+GL R+ +A E
Sbjct: 376 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 435
Query: 492 MRLKGMVPEPRT 503
M+ G+ P T
Sbjct: 436 MQDNGVNPTVET 447
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 160/380 (42%), Gaps = 49/380 (12%)
Query: 91 AINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRY--RFDWEAAY-TFFKWVS 147
+I + + K VS E+ ++L L T + +IN Y + E A+ TF + S
Sbjct: 344 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 403
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-LVNE--KTYGILLNRYAAAHMV 204
R P +NA+++ L +A R + EM D VN +T+ L++ Y +
Sbjct: 404 RH--IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 461
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
E+ V E ++N ++ + I+
Sbjct: 462 EKCFIVLS----------------------------------EMQENGLKPNVVSYGSIV 487
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N +C G + EA D+ P++ Y ++A + G A L + M G
Sbjct: 488 NAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 547
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P +VT N +I LC + +I EA E++ + N +P+ +YN+LI C ++ +
Sbjct: 548 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID---KA 604
Query: 385 LDEMEQKNGSCLPNEI-TFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
LD ++ + + + + T++ L+ L + E+ ++ ++M +N S +N++++
Sbjct: 605 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 664
Query: 441 YVNWDCEDKVRHTWEEMEKK 460
Y + E K +EM +K
Sbjct: 665 YSKYGNEIKAEDLRKEMLQK 684
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 108/273 (39%), Gaps = 49/273 (17%)
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP-DVVT 329
G + +R + + + PD+ + V A G LG A+ + + M G P + +
Sbjct: 143 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 202
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI-------------------- 369
N +I + R +A+EV EM R LPN TYN++I
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262
Query: 370 ---------------KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
LC+ RM LDEM + +P+ T++ L L + +
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ--KMVPDGFTYSILFDGLSRNGD 320
Query: 415 VPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE----MEKKGMGPDQR 467
+L + +NG + T +++L N C+D EE + G+ P +
Sbjct: 321 SKAMLSLFGKYLKNGVTIGDYTCSILL----NGLCKDGKVSIAEEVLQSLVNAGLVPTRV 376
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
Y +I+G G LE A S F +M+ + + P+
Sbjct: 377 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPD 409
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 185/422 (43%), Gaps = 66/422 (15%)
Query: 152 YSPGSNVFNAILDVLG-----RARRFVELIQVFDEM-PDLV--NEKTYGILLNRYAAAHM 203
Y+P +NA+L L ARRF FD M D V N TY IL+
Sbjct: 119 YAPSVLAYNAVLLALSDASLPSARRF------FDSMLSDGVAPNVYTYNILVRALCGRGH 172
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMN 261
+EA+ V + G + + L+ CR V+ AE + + E G ++ T N
Sbjct: 173 RKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMR-EGGLKPNLVTFN 231
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++NG C G + +A++ + +++K PD V+Y T V K G AL +F M K
Sbjct: 232 SVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRK 291
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG------------------------ 357
G PDVVT +I +C + A+ ++REM+ RG
Sbjct: 292 GIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDA 351
Query: 358 -----------CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
P+V YN+LI C + RM+ E + EME K P+ +T++ +L
Sbjct: 352 LLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVK--PDVVTYSTIL 409
Query: 407 KSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDK----VRHTWEEMEK 459
+ K + ++M NG TY+ ++++ CE+K ++ M
Sbjct: 410 SAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVL----CEEKRLGDAHVLFKNMIS 465
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERG 518
G+ PD+ +YT +I G +G +E ALS EM G++P+ T +L+N ++ + +
Sbjct: 466 LGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKE 525
Query: 519 EQ 520
Q
Sbjct: 526 AQ 527
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 180/421 (42%), Gaps = 71/421 (16%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
REG P FN++++ + +A R + +VFDEM PD V +Y L+ Y
Sbjct: 219 REGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGV---SYNTLVGGYCKV 275
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA---------------ETFF 246
EA+ VF G + D+ F +L+ +C+ ++E A E F
Sbjct: 276 GCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITF 335
Query: 247 ESEKNEF---GY------------------DIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
+ + F G+ + N ++NG+C++G + EA+ +++
Sbjct: 336 TALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEA 395
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+PD VTY+T ++A K G +A +L Q M E G PD +T + +I LC +KR+ +
Sbjct: 396 KGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGD 455
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A + + M + G P+ TY SLI CK +E DEM + LP+ +T++ L
Sbjct: 456 AHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVK--AGVLPDVVTYSVL 513
Query: 406 LKSLKKP----------------EEVPW-----VLERMERNGCKMSTDTYNVILKLYVNW 444
+ L K E VP L R RN + +LK +
Sbjct: 514 INGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNA---ELKSVLALLKGFCMK 570
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTG 504
++ ++ + + D Y+V+IHG +G + ALS+ +M G P +
Sbjct: 571 GLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTST 630
Query: 505 I 505
I
Sbjct: 631 I 631
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 110/285 (38%), Gaps = 66/285 (23%)
Query: 148 REGDYSPGSNVFNAILD---VLGR---ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAA 201
R+ P +NA+++ ++GR AR V ++ PD+V TY +L+ Y
Sbjct: 359 RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVV---TYSTILSAYCKN 415
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK--- 258
A + + E G L D + +L+ LC K + A F KN ++
Sbjct: 416 GDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLF---KNMISLGLQPDE 472
Query: 259 -TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK------------- 304
T +++G C GNV A +++K+ PD VTY+ +N L+K
Sbjct: 473 VTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFK 532
Query: 305 -------------------------------------KGKLGTALRLFQAMWEKGRKPDV 327
KG + A +++Q++ ++ D
Sbjct: 533 LYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDG 592
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ +I C + + +AL ++M G PN T+ SLI+ L
Sbjct: 593 SVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGL 637
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 101/246 (41%), Gaps = 28/246 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+ FK + G P + +++D + + + DEM PD+V TY
Sbjct: 456 AHVLFKNMISLG-LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVV---TYS 511
Query: 193 ILLNRYAAAHMVEEAIGV---------------FDRRKEFGELDDLSAFQNLLLWLCRYK 237
+L+N + + +EA + +D +L + LL C
Sbjct: 512 VLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKG 571
Query: 238 HVEVAETFFES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
+ A+ ++S ++N + D +++++G C GNV +A F K +++ P+S +
Sbjct: 572 LMNEADKVYQSILDRN-WNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTST 630
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+ + L +KG + A ++ Q + D +ID + + L+VL M
Sbjct: 631 ISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMAR 690
Query: 356 RGCLPN 361
G LP+
Sbjct: 691 DGLLPS 696
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 172/361 (47%), Gaps = 15/361 (4%)
Query: 149 EGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVE 205
E + P + +L V+ G+ +EL++ +E ++ Y I+++ ++
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIIL 264
A +F+ + G D+ + L+ C + A+ + K + D+ + ++
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ + G + EA+ K++I+ PD+VTY + ++ K+ +L A + M KG
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P++ T N +I+ C I + LE+ R+M RG + + TYN+LI+ C++ ++E E
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
EM + P+ +++ LL L +PE+ + E++E++ ++ YN+I+
Sbjct: 445 FQEMVSRR--VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 442 VNWDCEDKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
N KV W+ + KG+ PD ++Y +MI GL KG L +A F +M G
Sbjct: 503 CN---ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 499 P 499
P
Sbjct: 560 P 560
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 12/285 (4%)
Query: 226 FQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
F L + R K + V + + E +++ T++I++N C + A II
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K EPD+VT++T +N L +G++ AL L M E G KP ++T N +++ LC ++
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+A+ ++ M G PN TY ++K +CK + E L +ME++ + + ++
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL--DAVKYSI 252
Query: 405 LLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYV---NWDCEDKVRHTWEEME 458
++ L K + + ME G K Y +++ + WD K+ +M
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL---LRDMI 309
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K+ + PD +++ +I +G+L +A EM +G+ P+ T
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 141/305 (46%), Gaps = 10/305 (3%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V + L++ + + EA + + G D + +L+ C+ ++ A
Sbjct: 315 PDVV---AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 243 ETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ ++ G +I+T NI++NG+C + + ++ + D+VTY T +
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+ GKL A LFQ M + +PD+V+ ++D LC +ALE+ +++ +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWV 418
+ YN +I +C +++ ++ + K P+ T+N ++ L K E +
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK--PDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+ME +G + TYN++++ ++ K EE+++ G D + +++ L D
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD 609
Query: 479 KGRLE 483
GRL+
Sbjct: 610 -GRLK 613
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 146/315 (46%), Gaps = 19/315 (6%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + E ++ EM PD V TY L++ + + +++
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV---TYTSLIDGFCKENQLDK 370
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A + D G ++ F L+ C+ ++ E F + D T N ++
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C LG + AK +++++ + PD V+Y ++ L G+ AL +F+ + + +
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ N II +C ++ +A ++ + +G P+V TYN +I LCK +
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+ME+ S PN T+N L+++ + ++E ++R C S D V K+ V
Sbjct: 551 RKMEEDGHS--PNGCTYNILIRAHLGEGDATKSAKLIEEIKR--CGFSVDASTV--KMVV 604
Query: 443 NWDCEDKVRHTWEEM 457
+ + +++ ++ +M
Sbjct: 605 DMLSDGRLKKSFLDM 619
>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 706
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 182/407 (44%), Gaps = 54/407 (13%)
Query: 153 SPGSNVFNAILDVL------GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
+P S +N +L L G A VE + D PD + T+G+L++ + + +V+
Sbjct: 187 APNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPD---DLTFGMLIHSFCQSGLVDR 243
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNG 266
A+G+ DR + G + ++ V+ A F + DI + N +L G
Sbjct: 244 AMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMPCK--PDIFSYNAVLKG 301
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +A ++++ C PD VT+ T ++ L KG + AL + M + GRKPD
Sbjct: 302 LCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPD 361
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
T + +I+A + + +ALE+LR M C PN Y S++K LC+ + E V + +
Sbjct: 362 NFTYSALINAFSEQGCVEDALELLRSMP---CSPNTVCYKSVLKGLCRDGQWEDVGQLIG 418
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER-----------------NG--- 426
EM + + C P+E+ F ++ L + V LE ++ NG
Sbjct: 419 EMVRND--CAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAE 476
Query: 427 ---------------CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
CK +T TYN +L + + +EM + P++ ++++
Sbjct: 477 YGRVDDSLKLFKSMTCKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSI 536
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERG 518
+I L KG +E A+ F +M++ G P I+ + +N L E+G
Sbjct: 537 LISSLCQKGLVECAIDVFEKMQMYGCTP---NVIIYSTLNNGLSEKG 580
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 136/330 (41%), Gaps = 18/330 (5%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
LG ++L+ E P +V +L+ + AA + +A GV R E + D
Sbjct: 74 LGDLDAALQLVGSMSEPPAVV---PCTLLIKKLCAAGRLADAEGVL-RASEAADAVD--- 126
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
L+ CR + AE S D+ T N ++ G+C G + +A+ +
Sbjct: 127 HNTLVAGYCRAGRLADAERMLRSLAASGAADVVTYNTLIAGYCRGGRLEDARLLVASMPP 186
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+ P+S Y T + L + G A L + M PD +T +I + C +
Sbjct: 187 A---PNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDR 243
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A+ +L M GC P YN +I ++ R++ M C P+ ++N +
Sbjct: 244 AMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCM-----PCKPDIFSYNAV 298
Query: 406 LKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
LK L + E+ ++ M R C T+N ++ + D ++M K G
Sbjct: 299 LKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGR 358
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
PD +Y+ +I+ ++G +EDAL M
Sbjct: 359 KPDNFTYSALINAFSEQGCVEDALELLRSM 388
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 171/409 (41%), Gaps = 53/409 (12%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYG 192
WE A + R+ D SP FN ++ L ++V D+MP + TY
Sbjct: 308 WEDAGELITEMVRK-DCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYS 366
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKN 251
L+N ++ VE+A+ + + + ++++L LCR E V + E +N
Sbjct: 367 ALINAFSEQGCVEDALELL---RSMPCSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRN 423
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ D +I++ C G V +++ C PD V Y + +N + G++ +
Sbjct: 424 DCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDS 483
Query: 312 LRLFQAM---------------------WEKGRK-----------PDVVTCNCIIDALCF 339
L+LF++M WE K P+ +T + +I +LC
Sbjct: 484 LKLFKSMTCKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQ 543
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
K + A++V +M+ GC PNV Y++L L + ++ + L+ M SC +
Sbjct: 544 KGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNNM-----SCKADT 598
Query: 400 ITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
I ++ LK L + E+ ++ M R C T+++I+ + +
Sbjct: 599 ICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDL 658
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
M K P+ Y+ +I+G + G LEDAL L+ M EP T +
Sbjct: 659 MLKYECTPNIVIYSSLINGFSEHGHLEDALKL-----LRSMPCEPDTSV 702
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 85/225 (37%), Gaps = 45/225 (20%)
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL------ 359
G L AL+L +M E P VV C +I LC R+ +A VLR + +
Sbjct: 75 GDLDAALQLVGSMSEP---PAVVPCTLLIKKLCAAGRLADAEGVLRASEAADAVDHNTLV 131
Query: 360 ------------------------PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
+V TYN+LI C+ R+E + M
Sbjct: 132 AGYCRAGRLADAERMLRSLAASGAADVVTYNTLIAGYCRGGRLEDARLLVASMPPA---- 187
Query: 396 LPNEITFNYLLKSLKKPEEVPW-----VLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
PN +N LLK L ++ W ++E M RN T+ +++ + D+
Sbjct: 188 -PNSYAYNTLLKGLCSAKQ--WGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRA 244
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+ M K G P Y +I + GR+++AL F M K
Sbjct: 245 MGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMPCK 289
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 9/321 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY IL++ AH E A+ F + G D+ +LL C K + A
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHR 172
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNALTKK 305
E G D+ + +I+L C G +A + + + + C PD V Y T ++ K+
Sbjct: 173 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKE 232
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G + A LF+ M ++G PD VT + ++ ALC + + +A LR+M N+G LPN TY
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTY 292
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
N+LI + + EM ++ S LP+ +TFN L+ SL K +E V + M
Sbjct: 293 NNLIYGYSSTGQWKEAVRVFKEMRRQ--SILPDVVTFNMLMGSLCKYGKIKEARDVFDTM 350
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G +YN++L Y C + ++ M G+ P ++ V+I + G L
Sbjct: 351 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGML 410
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
+ A+ F+EMR G+ P T
Sbjct: 411 DKAMIIFNEMRDHGVKPNVLT 431
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 171/429 (39%), Gaps = 53/429 (12%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N ++D + + +F EM PD V TY +++ A +++
Sbjct: 216 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFV---TYSSVVHALCKARAMDK 272
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILN 265
A + G L + + NL+ E F E + D+ T N+++
Sbjct: 273 AEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMG 332
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G + EA+ + + PD +Y +N KG L LF M G P
Sbjct: 333 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ T N +I A + +A+ + EM++ G PNV TY ++I LC+I +M+ E
Sbjct: 393 VICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKF 452
Query: 386 DEMEQKNGSCLPNEITFNYLLKS-------LKKPEEVPWVL-----------ERMERNGC 427
++M + + P++ ++ L++ LK E + ++ + N C
Sbjct: 453 NQMIDQGVA--PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLC 510
Query: 428 KM--------------------STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
K+ + Y++++ Y +K ++ M G+ P+
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDV 570
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKL 527
Y +++G GR+++ LS F EM KG+ P + IL N + L E G +K
Sbjct: 571 VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP---STILYNIIIDGLFEAGRTVPAKVKF 627
Query: 528 TSLGLKGNA 536
+ G A
Sbjct: 628 HEMTESGIA 636
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 164/376 (43%), Gaps = 21/376 (5%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
R+ P + ++ L R + + ++ F++M D G+ ++YA +++
Sbjct: 421 RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMID------QGVAPDKYAYHCLIQGF 474
Query: 208 I--GVFDRRKEF-------GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK 258
G + KE G D+ F +++ LC+ V A+ F+ N +
Sbjct: 475 CTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTA 534
Query: 259 TM-NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
+ +++++G+C++G + +A R + ++ + EP+ V Y T VN K G++ L LF+
Sbjct: 535 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFRE 594
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M +KG KP + N IID L R A EM G N TY+ +++ L K +
Sbjct: 595 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 654
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTY 434
+ E+ N + IT N ++ + ++ EE + + R+G TY
Sbjct: 655 FDEAIFLFKELRAMNVKI--DIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTY 712
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++++ + ++ + M+ G PD R ++ L K + A +Y ++
Sbjct: 713 SIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDE 772
Query: 495 KGMVPEPRTGILVNDM 510
+ E T +L+ D+
Sbjct: 773 RNFSLEHLTTMLLVDL 788
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 4/219 (1%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
P S TYA ++ T+ + AL F + G + D++ N ++ C KR EAL+
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALD 167
Query: 349 V-LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+ L GC+P+V +Y+ L+K LC + + L M + C P+ + +N ++
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVID 227
Query: 408 SLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
K +V + + M + G TY+ ++ DK +M KG+ P
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +Y +I+G G+ ++A+ F EMR + ++P+ T
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVT 326
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 107 GEIEKALNQCELTLT------DDLIVNVINRY----RFDWEAAYTFFKWVSREGDYSPGS 156
G++EKAL + ++ D + ++N Y R D + F+ + ++G P +
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRID--EGLSLFREMLQKG-IKPST 604
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
++N I+D L A R V F EM + +N+ TY I+L +EAI +F
Sbjct: 605 ILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE 664
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGN 272
+ D+ ++ + + + VE A+ F S ++ + T +I++ G
Sbjct: 665 LRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGL 724
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
V EA+ + + + CEPDS V L KK ++
Sbjct: 725 VEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 760
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 178/393 (45%), Gaps = 51/393 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N +LD L + RF E+ +V++ M PD++ TYGIL++ + V+ A
Sbjct: 262 PNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVI---TYGILIHGLCRSGDVDGA 318
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
V+ + G + D + + +L+ C+ V+ A F++S +++T NI++ G
Sbjct: 319 ARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGL 378
Query: 268 CVLGNVYEAKRFWKDIIKS-KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
G V EA W + K C PD+VT+ T ++ L + G A +F+ G++ D
Sbjct: 379 FDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLD 438
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V + + +I+ LC R+ +A++V +M GC PN YN+LI C++ R
Sbjct: 439 VFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS 498
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILK---- 439
+M NG C P IT+N L+ L K E E V M NG TY +++
Sbjct: 499 KMAD-NG-CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFS 556
Query: 440 ---------------------------LYVNWDCE----DKVRHTWEEM-EKKGMGPDQR 467
+ ++ C D+ H + +M EKK P+
Sbjct: 557 DKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLV 616
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+Y ++ GLY+ G ++ A + + + G+ P+
Sbjct: 617 TYNTLMDGLYETGYIDKAATLWTSITEDGLEPD 649
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 166/350 (47%), Gaps = 6/350 (1%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDE--MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
+ ++N+++ +A R E + +D L N +TY I++ + MV+EAI ++D
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDL 393
Query: 214 -RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCVLG 271
K+ + D F L+ LC+ A T FE + + D+ + + ++NG C +G
Sbjct: 394 LEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVG 453
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ +A + ++ + K C+P+S Y ++ + + A+R++ M + G P V+T N
Sbjct: 454 RLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYN 513
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+ID LC ++ EA V REM G P++TTY SLI+ L K+++ ++ K
Sbjct: 514 TLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYK 573
Query: 392 N--GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
+ + I + L + K E + + E+ C + TYN ++ DK
Sbjct: 574 GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDK 633
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
W + + G+ PD SY I GL R+ + + E+ +G++P
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIP 683
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 161/376 (42%), Gaps = 16/376 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-------LVNEK 189
+AA F+ + +PG NA+LD RARRF + F + N +
Sbjct: 100 DAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQ 159
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
TY I+L A ++ A+ +FD + D + L+ L + ++ A + E
Sbjct: 160 TYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEM 219
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGK 307
++ D+ N +L G G + R W ++K P+ TY ++ L K G+
Sbjct: 220 PRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGR 279
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+++ M +PDV+T +I LC + A V E+ G + + YNS
Sbjct: 280 FKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNS 339
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMER 424
L+K C+ R++ +++ D + L N T+N ++K L V +E +E+
Sbjct: 340 LVKGFCQAGRVQEAWKFWD---SAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEK 396
Query: 425 N-GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+ C T T+ ++ +K +EE G D SY+ MI+GL + GRL
Sbjct: 397 DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLV 456
Query: 484 DALSYFHEMRLKGMVP 499
DA+ + +M G P
Sbjct: 457 DAVKVYEKMDKDGCKP 472
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 117/226 (51%), Gaps = 5/226 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P S+++NA++ + R + ++++ +M D TY L++ A +EA V
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSV 531
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCV 269
E G D++ + +L+ L K ++ A + ++ D+ NI+++G C
Sbjct: 532 AREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCS 591
Query: 270 LGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G V EA + D+ + K C P+ VTY T ++ L + G + A L+ ++ E G +PD++
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDII 651
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+ N I LC RI E +++L E+ +RG +P V T+N L++ + K
Sbjct: 652 SYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 12/222 (5%)
Query: 299 VNALTKKGKLGTALRLFQAMWE-KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN-- 355
++A ++ AL F+A+ G P + + N ++DA +R +A + +
Sbjct: 90 LSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGA 149
Query: 356 --RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
R PN+ TYN +++ LC ++ D + ++ + P+ IT++ L+ L K +
Sbjct: 150 FGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVA--PDCITYSTLMCGLAKQD 207
Query: 414 EVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSY 469
+ +L+ M R+G + YN +L +KV W+++ K G P+ +Y
Sbjct: 208 RLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
VM+ GL GR ++ + M + P+ T GIL++ +
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 162/340 (47%), Gaps = 19/340 (5%)
Query: 172 FVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
V++ +FD M PD+ T+ +L+ YA M+++A+ +F+ ++ G D+
Sbjct: 379 LVDMTDLFDLMLGDGIAPDIY---TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT 435
Query: 226 FQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ ++ LCR ++ A E F + D + ++ G+C G++ +AK +I+
Sbjct: 436 YTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIM 495
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+ D V +++ +N L K G++ A +F G+ PD V + ++D C ++
Sbjct: 496 NNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKME 555
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+AL V M + G PNV Y +L+ CKI R++ EM QK P+ I +N
Sbjct: 556 KALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK--PSTILYNI 613
Query: 405 LLKSL-----KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
++ L P +V + M +G ++ TYN++L+ + C D+ ++E+
Sbjct: 614 IIDGLFVAGRTVPAKVKF--HEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRA 671
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ D + MI G++ R+E+A F + G+VP
Sbjct: 672 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 151/321 (47%), Gaps = 9/321 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY IL++ AH E A+ F + G D+ +LL C K + A
Sbjct: 117 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHR 176
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNALTKK 305
E G D+ + +I+L C G +A + + + + C PD V Y T ++ K+
Sbjct: 177 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKE 236
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G + A LF+ M ++G PD+VT + ++ ALC + + +A LR+M N+G LP+ TY
Sbjct: 237 GDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTY 296
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
N+LI + + EM + S LP+ +T N L+ SL K +E V + M
Sbjct: 297 NNLIYGYSSTGQWKEAVRVFKEMRRH--SILPDVVTLNMLMGSLCKYGKIKEARDVFDTM 354
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G +Y ++L Y C + ++ M G+ PD +++V+I + G L
Sbjct: 355 AMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGML 414
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
+ A+ F+EMR G+ P+ T
Sbjct: 415 DKAMIIFNEMRDHGVKPDVVT 435
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 160/370 (43%), Gaps = 22/370 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + ++D + + +F EM PDLV TY +++ A + +
Sbjct: 220 SPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLV---TYSSVVHALCKARAMGK 276
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILN 265
A + G L D + NL+ E F E ++ D+ T+N+++
Sbjct: 277 AEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMG 336
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G + EA+ + + PD +Y +N KG L LF M G P
Sbjct: 337 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAP 396
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T + +I A + +A+ + EM++ G P+V TY ++I LC+I +M+ E
Sbjct: 397 DIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKF 456
Query: 386 DEMEQKNGSCLPNEITFNYLLK------SLKKPEEVPWVLERMERNGCKMSTDTYNVILK 439
++M + + P++ ++ L++ SL K +E+ +LE M NG ++ ++ I+
Sbjct: 457 NQMIDQGVA--PDKYAYHCLIQGFCTHGSLLKAKEL--ILEIMN-NGMRLDIVFFSSIIN 511
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++ ++ G PD Y++++ G G++E AL F M G+ P
Sbjct: 512 NLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 571
Query: 500 EPRT-GILVN 508
G LVN
Sbjct: 572 NVVVYGTLVN 581
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 4/219 (1%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
P S TYA ++ T+ + AL F + G + D++ N ++ C KR EAL+
Sbjct: 112 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALD 171
Query: 349 V-LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+ L GC+P+V +Y+ L+K LC + + L M + C P+ + + ++
Sbjct: 172 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVID 231
Query: 408 SLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
K +V + + M + G TY+ ++ K +M KG+ P
Sbjct: 232 CFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLP 291
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D +Y +I+G G+ ++A+ F EMR ++P+ T
Sbjct: 292 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVT 330
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 12/214 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFD------EMPDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
F++I++ L + R ++ +FD + PD V Y +L++ Y +E+A+ VFD
Sbjct: 506 FSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAV---VYSMLMDGYCLVGKMEKALRVFD 562
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVL 270
G ++ + L+ C+ ++ + F E + G T+ NII++G V
Sbjct: 563 AMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFR-EMLQKGIKPSTILYNIIIDGLFVA 621
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G AK + ++ +S + TY + K A+ LF+ + K D++T
Sbjct: 622 GRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITL 681
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
N +I + +R+ EA ++ + G +P V T
Sbjct: 682 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 175/397 (44%), Gaps = 44/397 (11%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E Y P N +++ L R E + + D M NE TYG +LNR +
Sbjct: 167 EMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTA 226
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIIL 264
A+ +F + +E + + ++ LC+ +++ A + F E E D+ + I+
Sbjct: 227 LALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSII 286
Query: 265 NGWC-------------------VLGNVY----------------EAKRFWKDIIKSKCE 289
G C ++ NV EAK + +++
Sbjct: 287 GGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIA 346
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD++TY++ ++ K+ +LG A ++ M KG +P++VT + +I++ C KR+ + +
Sbjct: 347 PDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRL 406
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
E+ ++G + + TYN+L++ C+ ++ E EM + P+ +T+ LL L
Sbjct: 407 FCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVP--PSVVTYGILLDGL 464
Query: 410 KKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
E+ L E+M+++ + YN+I+ N D + + KG+ PD
Sbjct: 465 CDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDV 524
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+Y VMI GL KG L +A F +M+ G P T
Sbjct: 525 LTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCT 561
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 159/364 (43%), Gaps = 42/364 (11%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N T I++N + + A V R +FG + F L+ C V A
Sbjct: 103 NMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALV 162
Query: 247 ESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ + ++ ++ T+N ++NG C+ G V EA ++K CE + +TY +N + K
Sbjct: 163 DRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKS 222
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G AL LF+ M E+ K VV + +ID+LC + +AL + EM+ +G +V Y
Sbjct: 223 GNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAY 282
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK-------------- 411
+S+I LC R + + L EM +N +PN +TF+ L+ K
Sbjct: 283 SSIIGGLCNDGRWDDGAKMLREMIGRN--IIPNVVTFSALIDVFVKEGKLLEAKELYNEM 340
Query: 412 ------PEEVPW------------------VLERMERNGCKMSTDTYNVILKLYVNWDCE 447
P+ + + +L+ M GC+ + TY++++ Y
Sbjct: 341 VARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRV 400
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GIL 506
D + E+ KG+ D +Y ++ G G+L A F EM +G+ P T GIL
Sbjct: 401 DNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGIL 460
Query: 507 VNDM 510
++ +
Sbjct: 461 LDGL 464
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 144/304 (47%), Gaps = 6/304 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNI 262
V EAI +F+ + L L F L + R K ++ F E + N +++ TMNI
Sbjct: 50 VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++N +C + A +K EP+++T++T +N +G++ A+ L M E
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+P+VVT N +I+ LC K R+ EAL ++ M GC N TY ++ +CK
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
+ +ME++ S + + ++ ++ SL K ++ + ME G K Y+ I+
Sbjct: 230 DLFRKMEER--SIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIG 287
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
N D EM + + P+ +++ +I +G+L +A ++EM +G+ P
Sbjct: 288 GLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAP 347
Query: 500 EPRT 503
+ T
Sbjct: 348 DTIT 351
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 142/314 (45%), Gaps = 15/314 (4%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNA 161
++S E+E + ++ +I + N R+D + A + + R + P F+A
Sbjct: 263 ALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWD-DGAKMLREMIGR--NIIPNVVTFSA 319
Query: 162 ILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
++DV + + +E ++++EM PD + TY L++ + + + EA + D
Sbjct: 320 LIDVFVKEGKLLEAKELYNEMVARGIAPDTI---TYSSLIDGFCKENRLGEANQMLDLMV 376
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVY 274
G ++ + L+ C+ K V+ F E D T N ++ G+C G +
Sbjct: 377 SKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLN 436
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
AK +++++ P VTY ++ L G+L AL +F+ M + + N II
Sbjct: 437 VAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIII 496
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+C ++ +A + + +G P+V TYN +I LCK + +M K
Sbjct: 497 HGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKM--KEDG 554
Query: 395 CLPNEITFNYLLKS 408
C P++ T+N L+++
Sbjct: 555 CAPSDCTYNILIRA 568
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 112/279 (40%), Gaps = 47/279 (16%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
EA + + V+R +P + +++++D + R E Q+ D M P++V
Sbjct: 331 LEAKELYNEMVAR--GIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIV--- 385
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY IL+N Y A V+ + +F G + D + L+ C+ + VA+ F+
Sbjct: 386 TYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEM 445
Query: 249 -----------------------------------EKNEFGYDIKTMNIILNGWCVLGNV 273
+K+ I NII++G C V
Sbjct: 446 VSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKV 505
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+A + + +PD +TY + L KKG L A LF+ M E G P T N +
Sbjct: 506 DDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNIL 565
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
I A + ++E++ EMK RG + +T ++ L
Sbjct: 566 IRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVML 604
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 169/375 (45%), Gaps = 49/375 (13%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L +A R +E+++ + + PD+ +Y +++ ++ A+ ++ A VFDR + G D+
Sbjct: 113 LKKAMRVMEILETYGD-PDVY---SYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVT 168
Query: 226 FQNLLLWLCRYKHVEVA------------------------ETFFESEKNE--------- 252
+ ++ LC +E+A T E NE
Sbjct: 169 YNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELV 228
Query: 253 ---FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
D+ T N I+ G C G A F + + C PD V+Y + + K +
Sbjct: 229 SRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWE 288
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
RL + M G +P+VVT + +I + C + R+ EA+ VL MK +G P+ +Y+ LI
Sbjct: 289 DGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLI 348
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNG 426
CK R++ EYL++M CLP+ + +N +L +L K + V E+++ G
Sbjct: 349 SAFCKEGRLDLAIEYLEKMVSDG--CLPDIVNYNTILATLCKFGCADLALDVFEKLDEVG 406
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVR--HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
C + YN + W C +K++ EM +KG+ PD+ +Y +I L G +++
Sbjct: 407 CPPTVRAYNTMFSAL--WSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDE 464
Query: 485 ALSYFHEMRLKGMVP 499
A+ +M P
Sbjct: 465 AIGLLVDMEATRFQP 479
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 175/400 (43%), Gaps = 58/400 (14%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R +SP +N ++ L + +V DE+ P ++ TY IL+
Sbjct: 158 RSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVI---TYTILIEATILE 214
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTM 260
+ EA+ +FD G DL + ++ +C+ + A F D+ +
Sbjct: 215 GRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSY 274
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
NI+L + + +R KD++ S CEP+ VT++ +++ ++G++ A+ + + M E
Sbjct: 275 NILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKE 334
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME- 379
KG PD + + +I A C + R+ A+E L +M + GCLP++ YN+++ LCK +
Sbjct: 335 KGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADL 394
Query: 380 --TVYEYLDEM------------------------------EQKNGSCLPNEITFNYLLK 407
V+E LDE+ E P+EIT+N L+
Sbjct: 395 ALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLIS 454
Query: 408 SLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME------ 458
L + +E +L ME + + ++N++L K +E +E
Sbjct: 455 CLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMC------KAHRVFEGIELLITMV 508
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+KG P++ SY ++I G+ G +A+ + + G++
Sbjct: 509 EKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVI 548
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 6/240 (2%)
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+LN C G E+ F + ++ +PD V + L A+R+ + + G
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDV + N +I +I A +V M++RG P+V TYN +I LC ++E +
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK 439
E +DE+ K+G C P+ IT+ L+++ + E + + + G + TYN I++
Sbjct: 187 EVMDEL-LKDG-CKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIR 244
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
ED+ + +G PD SY +++ +K R ED +M L G P
Sbjct: 245 GICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEP 304
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 119/237 (50%), Gaps = 17/237 (7%)
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+N + GK +L +++ KG KPDVV C +I + + +A+ V+ ++ G
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEE 414
P+V +YN++I K ++++ + D M + S P+ +T+N ++ SL K E
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFS--PDVVTYNIMIGSLCSRGKLEL 184
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
V++ + ++GCK S TY ++++ + ++ ++E+ +G+ PD +Y +I
Sbjct: 185 AFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIR 244
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKL-----KERGEQGKKVIK 526
G+ +G + AL + + +G P+ V NI L K R E G++++K
Sbjct: 245 GICKEGMEDRALDFVRHLSARGCNPD------VVSYNILLRSFLNKSRWEDGERLMK 295
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 17/255 (6%)
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYA 199
V +E +P S ++ ++ + R I+ ++M PD+VN T L ++
Sbjct: 331 VMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFG 390
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLL--LWLCRYKHVEVAETFFESEKNEFGYDI 257
A + A+ VF++ E G + A+ + LW C K ++ E E + D
Sbjct: 391 CADL---ALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNK-IKALEMISEMIRKGIDPDE 446
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T N +++ C G V EA D+ ++ +P +++ + + K ++ + L
Sbjct: 447 ITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLIT 506
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M EKG P+ + +I+ + + EA+E+ + G + ++ K L K
Sbjct: 507 MVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGDSS-----KRLNKTFP 561
Query: 378 METVYEYLDEMEQKN 392
M VY+ L E KN
Sbjct: 562 MLDVYKGLSLSESKN 576
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 172/370 (46%), Gaps = 16/370 (4%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTY 191
+A+ F + + + G+ + FNA++ R + E I+VFD M PD +Y
Sbjct: 264 SAWNFLQMLCQRGN-PCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPD---THSY 319
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEK 250
IL++ V + G L ++ +LL LCR VE+A E F E+
Sbjct: 320 SILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEE 379
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
F +D +IILNG C N+ W D++ PD+ Y + + A + L
Sbjct: 380 QGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTD 439
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
AL +F+ M + G P+VVTC ++D ++ I EA L +++ G +PN+ Y +I
Sbjct: 440 ALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIIN 499
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGC 427
LCK+ + + V+ +M ++ +P+ + ++ ++ S K ++P + +M G
Sbjct: 500 GLCKVNKSDHVWGIFADMIKRGY--VPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGT 557
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
K + TY ++ + D +V ++ M +G+ PD+ YT +I + ++ AL
Sbjct: 558 KPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALE 617
Query: 488 YFHEMRLKGM 497
F M G+
Sbjct: 618 IFRGMGKLGL 627
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 166/367 (45%), Gaps = 31/367 (8%)
Query: 161 AILDVLGRARRFVELIQVFDEMPDLVNE--------KTYGILLNRYAAAHMVEEAIGVFD 212
+I+D G + R ++F+ P LV+ + Y ++ + M E+A+ +
Sbjct: 111 SIVDYCGSSGR-----ELFELAPMLVSSLGGSMTLLQVYATIIRIFVELSMFEDALLTYT 165
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF-GYDIKTMNIILNGWCVLG 271
K+ G L F LL L + A + F+ K+ ++ + +++++ +
Sbjct: 166 EAKKVGVELQLCNF--LLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGD 223
Query: 272 NVYEAKRF--WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+Y A+ F ++ +P++ TY T++ L++ ++ +A Q + ++G +
Sbjct: 224 RLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYC 283
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I C + ++ EA+EV MK G +P+ +Y+ L+ LCK + T Y+ L EM
Sbjct: 284 FNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEM- 342
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDC 446
+NG P ++++ LL L + +V E R+E G K Y++IL N C
Sbjct: 343 ARNGIA-PTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIIL----NGCC 397
Query: 447 E----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ + V W +M PD +YT +I+ L DAL F M G+ P
Sbjct: 398 QHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVV 457
Query: 503 TGILVND 509
T ++ D
Sbjct: 458 TCTILVD 464
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 140/341 (41%), Gaps = 43/341 (12%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEA 207
++ P + + +++ R R + + VF+ M D N T IL++ + M++EA
Sbjct: 416 NFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEA 475
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
+ ++FG + +L C Y+ +I+NG
Sbjct: 476 FLFLHKVRQFGIVPNL----------CMYR------------------------VIINGL 501
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C + + D+IK PD+V Y+ +++ K KL A RLF M ++G KP+V
Sbjct: 502 CKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNV 561
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T +I+ LC R+PE + + + M G P+ Y SLI CK M+ E
Sbjct: 562 FTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRG 621
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
M + S + + L+ K + ++E M G S TY ++ Y
Sbjct: 622 MGKLGLS--ADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKI 679
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
E K T+ M + G+ PD + ++ G D ED+
Sbjct: 680 GDERKANMTYNSMLQAGITPDAKLSCILGFG-NDADGFEDS 719
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 133/317 (41%), Gaps = 6/317 (1%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETF 245
N TYG L + V A + G + F ++ CR V E E F
Sbjct: 245 NAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVF 304
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+K D + +I+++G C G+V ++ ++ P V+Y++ ++ L +
Sbjct: 305 DAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRA 364
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK+ A LF+ + E+G K D + + I++ C I ++ +M + +P+ Y
Sbjct: 365 GKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNY 424
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERM 422
SLI C+ + + + M S PN +T L+ K +E L ++
Sbjct: 425 TSLIYAFCRHRNLTDALGVFELMLDSGVS--PNVVTCTILVDGFGKERMIDEAFLFLHKV 482
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+ G + Y VI+ + D V + +M K+G PD Y+++I +L
Sbjct: 483 RQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKL 542
Query: 483 EDALSYFHEMRLKGMVP 499
+A FH+M +G P
Sbjct: 543 PEAFRLFHKMLDEGTKP 559
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 161/387 (41%), Gaps = 13/387 (3%)
Query: 160 NAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAH--MVEEAIGVFDRR 214
N +L L + + +FD+M N +Y +L++ Y + EA +
Sbjct: 178 NFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEM 237
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKT--MNIILNGWCVLGN 272
+ G + + + L L R + V A F + G T N ++ G+C G
Sbjct: 238 EMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQR-GNPCNTYCFNAVIQGFCREGQ 296
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
V EA + + K PD+ +Y+ V+ L K+G + T L M G P +V+ +
Sbjct: 297 VQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSS 356
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
++ LC ++ A E+ R ++ +G + Y+ ++ C+ +E V + ++M N
Sbjct: 357 LLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHN 416
Query: 393 GSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
+P+ + L+ + + + V E M +G + T +++ + D+
Sbjct: 417 F--VPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDE 474
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
++ + G+ P+ Y V+I+GL + + F +M +G VP+ ++ D
Sbjct: 475 AFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIID 534
Query: 510 MNIKLKERGEQGKKVIKLTSLGLKGNA 536
+K + E + K+ G K N
Sbjct: 535 SFVKALKLPEAFRLFHKMLDEGTKPNV 561
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 197/436 (45%), Gaps = 30/436 (6%)
Query: 82 FQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYT 141
F G I+ V +++T + +E AL + L+ + IVN + R + E +
Sbjct: 29 FTTAQGAAISNEVLTVMETVN-----PMEDALEKLAPFLSSE-IVNDVMREQRRPELGFR 82
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRY 198
FF W +R + N ++D+L + F ++ +E+ + + T+ +L+ Y
Sbjct: 83 FFIWTTRRRSFRSWV-THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAY 141
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF--------ESEK 250
A + M E+A+ F + K+FG D+ + ++L HV V + F + K
Sbjct: 142 AKSGMAEKAVESFGKMKDFGCKPDVFTYNSIL-------HVMVQKEVFLLALAVYNQMLK 194
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ + T I+LNG C G +A + + ++ + P+++ Y ++ L + +
Sbjct: 195 LNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDD 254
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
RL M G PD +TCN ++D C +I EA +L+ + G + + Y+SLI
Sbjct: 255 VHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLID 314
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGC 427
L + KR + V E+ +M + P+ + + L++ + V + +L M + G
Sbjct: 315 GLFRAKRYDEVQEWCRKMFKAGIE--PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGL 372
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
T YN ++K + + DK R E+ K P +YT++I G+ G L++A
Sbjct: 373 SPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQ 432
Query: 488 YFHEMRLKGMVPEPRT 503
F++M G P T
Sbjct: 433 IFNQMENLGCSPSIMT 448
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 164/428 (38%), Gaps = 91/428 (21%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P +N+IL V+ + F+ + V+++M L N T+ ILLN ++A+ +
Sbjct: 164 PDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKM 223
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCV 269
FD + G + + +L LC+ K + + K + D T N +L+G+C
Sbjct: 224 FDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCK 283
Query: 270 LGNV-----------------------------YEAKRF-----W-KDIIKSKCEPDSVT 294
LG + + AKR+ W + + K+ EPD V
Sbjct: 284 LGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVL 343
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF-----KKR------- 342
Y + + G + AL + M ++G PD N +I C K R
Sbjct: 344 YTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEIS 403
Query: 343 -----------------------IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
+ EA ++ +M+N GC P++ T+N+LI LCK +E
Sbjct: 404 KNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELE 463
Query: 380 TVYEYLDEMEQKNGSCLPNEI---------TFNYLLKSLKKPEEVPWVLERMERNGCKMS 430
+ME L + T N + + + E+ VL++M +NGC S
Sbjct: 464 EARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHR-VDREEDAFRVLDQMVKNGCTPS 522
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG--PDQRSYTV-MIHGLYDKGRLEDALS 487
+ Y K + W C + K + P Q T+ + ++KG LE A+
Sbjct: 523 SAVY----KCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVR 578
Query: 488 YFHEMRLK 495
EM K
Sbjct: 579 CLLEMNFK 586
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 165/392 (42%), Gaps = 42/392 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+ A+ + +EG Y G +++++D L RA+R+ E+ + +M PD+V
Sbjct: 288 DEAFALLQLFEKEG-YVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVV---L 343
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF-FESE 249
Y IL+ + MV+ A+ + + + G D + L+ C ++ A + E
Sbjct: 344 YTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEIS 403
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
KN+ T I++ G C G + EA++ + + C P +T+ ++ L K G+L
Sbjct: 404 KNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELE 463
Query: 310 TALRLFQAMWEKGRKPDVVT-----CNCIIDALCFKKRIP---EALEVLREMKNRGCLPN 361
A LF M E G+ P + + ++D R+ +A VL +M GC P+
Sbjct: 464 EARHLFYKM-EIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPS 522
Query: 362 VTTYNSLIKHLCKIKRMETVY----EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW 417
Y L+ C+ ++ + +YL + + T + +K E
Sbjct: 523 SAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDE------TLKLAEEHFEKGE---- 572
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWD---CE----DKVRHTWEEMEKKGMGPDQRSYT 470
LE+ R +M+ N + Y W C+ ++ + +++ M + S
Sbjct: 573 -LEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCV 631
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
++I+GL G LE A+ F KG + PR
Sbjct: 632 MLINGLCKDGNLEMAVDIFLYTLEKGFMLMPR 663
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 139/362 (38%), Gaps = 63/362 (17%)
Query: 153 SPGSNVFNAIL------DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
SP + +NA++ +L +AR I D P TY IL+ +++E
Sbjct: 373 SPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFP---TSCTYTILICGMCRNGLLDE 429
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF---ESEKNEF-------GYD 256
A +F++ + G + F L+ LC+ +E A F E KN G D
Sbjct: 430 ARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGAD 489
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA----- 311
+ M+ NG+ + +A R ++K+ C P S Y + +KGKL A
Sbjct: 490 -RVMDTA-NGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWL 547
Query: 312 -------------LRLFQAMWEKGRKPDVVTC----------------NCIIDALCFKKR 342
L+L + +EKG V C + LC +R
Sbjct: 548 KYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARR 607
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
EAL++ +K N + LI LCK +E + +K +P
Sbjct: 608 SEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPR--IC 665
Query: 403 NYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
N LL+SL +++ L+ + R M++ Y+ L Y++ + + W+ E + +
Sbjct: 666 NQLLRSLILQDKMKHALDLLNR----MNSAGYD--LDEYLHHRIKSYLLSVWKAQEMENV 719
Query: 463 GP 464
P
Sbjct: 720 AP 721
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 195/438 (44%), Gaps = 38/438 (8%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS---PGSNVFNAIL---DVLGRARR-- 171
+T L +I + E FFKWV R+ Y G +L D+ G A++
Sbjct: 1 MTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAV 60
Query: 172 -------------FVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
V+L+ D M +L ++ Y LL A +M A V+ R
Sbjct: 61 VLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMV 120
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETF-FESEKNEFGYDIKTMNIILNGWCVLGNVY 274
G + ++ ++ LC+ V+ AE F + + FG D ++ C ++
Sbjct: 121 NEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLG 180
Query: 275 EAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA R ++ + K + C P+SVTY+ ++ L + G+L A +L Q M EKG +P T +
Sbjct: 181 EAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 240
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I A C +A+++L EM + C+PNV TY LI LC+ ++E +M K+G
Sbjct: 241 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM-LKHG 299
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWV------LERMERNGCKMSTDTYNVILKLYVNWDCE 447
C P ITFN L+ K WV L ME+ CK + TYN +++
Sbjct: 300 LC-PGIITFNALINGYCKE---GWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKS 355
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
K + G+ PD+ +Y +++ G +G+L A + F+ M G+ P+ T +
Sbjct: 356 YKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTAL 415
Query: 508 NDMNIKLKERGEQGKKVI 525
D KL R EQ ++
Sbjct: 416 IDGLCKLG-RLEQANGIL 432
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 175/412 (42%), Gaps = 44/412 (10%)
Query: 130 NRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD----- 184
N R D A+ F+ +S+E P S ++ ++ L A R E Q+ EM +
Sbjct: 173 NCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP 232
Query: 185 ---------------------------------LVNEKTYGILLNRYAAAHMVEEAIGVF 211
+ N TY IL++R +EEA GVF
Sbjct: 233 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 292
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVL 270
+ + G + F L+ C+ V A EK +I+T N ++ G C +
Sbjct: 293 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 352
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
Y+A + ++ + PD VTY V+ K+G+L A +F +M G +PD T
Sbjct: 353 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 412
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+ID LC R+ +A +L M +G + T+ +LI CKI + + V + M +
Sbjct: 413 TALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE 472
Query: 391 KNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
CL TFN L +L K E +L +M + G S T+ ++++ +
Sbjct: 473 NR--CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 530
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
E M++ G P+ +YT++I+GL + GR+E+A + M G+ P
Sbjct: 531 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSP 582
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 181/429 (42%), Gaps = 70/429 (16%)
Query: 128 VINRY-RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARR----FVELIQVFDE- 181
+IN Y + W + V +G+ P +N +++ L R + F+ L +V D
Sbjct: 310 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 369
Query: 182 -MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
+PD V TY IL++ + + A +F+ G D F L+ LC+ +E
Sbjct: 370 LLPDRV---TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLE 426
Query: 241 VAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
A S K D T +++G C +G + ++++++++C + T+ F+
Sbjct: 427 QANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFL 486
Query: 300 NALTKKGKLGTA-----------------------------------LRLFQAMWEKGRK 324
+AL K KL A L++ + M + G
Sbjct: 487 DALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS 546
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+V T II+ LC R+ EA +L M + G PN TY L+K K R++ ++
Sbjct: 547 PNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQI 606
Query: 385 LDEMEQKNGSCLPNEITFNYLL------------KSLKKPEEV-PWVLERMERNGCKMST 431
+ M KNG C PN ++ LL ++L ++ L E + +S+
Sbjct: 607 VSTM-VKNG-CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSS 664
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
+ ++ + D K+R +E++K G+ P + Y ++ GL +GR+ +A +
Sbjct: 665 HVFRLM-----DVDHALKIR---DEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQD 715
Query: 492 MRLKGMVPE 500
M G+ P+
Sbjct: 716 MVKHGLFPD 724
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 135/336 (40%), Gaps = 13/336 (3%)
Query: 159 FNAILDV---LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
F A++D +G+A+ L + E L T+ L+ + + EA + +
Sbjct: 447 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 506
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVY 274
++G + + L+ CR ++ E K ++ T II+NG C G V
Sbjct: 507 KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE 566
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA+ + P+ TYA V A K G+L A ++ M + G +P+ + ++
Sbjct: 567 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 626
Query: 335 DALCFKKRI--PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
AL ++ R N L H+ ++ ++ + DE+++
Sbjct: 627 SGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCG 686
Query: 393 GSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
+P E +N+L+ L K E + + M ++G + I++ Y D
Sbjct: 687 ---VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHG-LFPDKAISSIIEHYCKTCKYDN 742
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
+ + P SY +IHGL ++GR+++A
Sbjct: 743 CLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEA 778
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 159/345 (46%), Gaps = 12/345 (3%)
Query: 165 VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
L A + +Q F PD V TY LLN + M+ EA + R K+ G + +
Sbjct: 224 TLADALSTLSKMQGFGLSPDAV---TYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRA 280
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ L+ R ++ A E+ FG+ D+ T N++ G C G V EA + +
Sbjct: 281 TYNTLVSAYARLGWIKQATDVVEA-MTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDE 339
Query: 283 IIK-SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+ + PD VTY T V+A K + AL L + M EKG K +VT N I+ LC +
Sbjct: 340 MEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREG 399
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
++ EAL L M G P+V TYN+LI CK + + +DEM + + T
Sbjct: 400 QLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKM--DTFT 457
Query: 402 FNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
N LL +L K+ EE +L + G +Y ++ Y + W+EM
Sbjct: 458 LNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMI 517
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K+ + P +Y +I GL G+L +A+ +E+ G+VP+ T
Sbjct: 518 KRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTT 562
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 162/357 (45%), Gaps = 15/357 (4%)
Query: 150 GDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHM 203
G SP +N ++D + +R + + + +EM LV T+ I++
Sbjct: 344 GIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLV---THNIIVKGLCREGQ 400
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNI 262
+EEA+G + E G D+ + L+ C+ +V A E ++ D T+N
Sbjct: 401 LEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNT 460
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+L C EA+ + + PD V+Y T + A K+ K AL L+ M ++
Sbjct: 461 LLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRK 520
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P + T N +I L ++ EA++ L E+ G +P+ TTYN +I CK +E +
Sbjct: 521 LTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAF 580
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK 439
++ ++M + S P+ +T N L+ L + E+ + E G K+ TYN +++
Sbjct: 581 QFHNKMVEN--SFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQ 638
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ D + +ME +G+ PD +Y V++ L + GR +A H++ G
Sbjct: 639 ALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG 695
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 175/391 (44%), Gaps = 27/391 (6%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRF--------DWEAAYTFFKWVSREGDYSPGSN 157
+G++E+AL + E+ + L +VI + A+ + R G +
Sbjct: 398 EGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSG-LKMDTF 456
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
N +L L + +R+ E ++ P + +E +YG ++ Y + E A+ ++D
Sbjct: 457 TLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEM 516
Query: 215 KEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
+ +S + L+ L K E + E + D T NII++ +C G++
Sbjct: 517 IKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDL 576
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+A +F ++++ +PD VT T +N L G+L A++LF++ EKG+K DV+T N +
Sbjct: 577 EKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTL 636
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I ALC + AL +M+ RG P+V TYN L+ L + R + L ++ +
Sbjct: 637 IQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNES-- 694
Query: 394 SCLPNEITFNYLLKSLKKPEEV------PWVLERMERNGCKMSTD--TYNVILKLYVNWD 445
++ + S+K E P V +E G D +YN +K
Sbjct: 695 ----GKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGG 750
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
+ + +EM +KGM D +Y ++ GL
Sbjct: 751 QLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 182/407 (44%), Gaps = 14/407 (3%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
+T ++IV + R E A + ++ EG +P +N ++D +A + +
Sbjct: 386 VTHNIIVKGLCR-EGQLEEALGRLEMMTEEG-LTPDVITYNTLIDASCKAGNVAKAFVLM 443
Query: 180 DEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL-WLCR 235
DEM ++ T LL EEA + + G + D ++ ++ +
Sbjct: 444 DEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKE 503
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
YK + E K + I T N ++ G +G + EA ++++ PD TY
Sbjct: 504 YKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTY 563
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
++A K+G L A + M E KPDVVTCN +++ LC R+ +A+++
Sbjct: 564 NIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVE 623
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KP 412
+G +V TYN+LI+ LCK ++T + +ME + P+ T+N LL +L +
Sbjct: 624 KGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRG--LQPDVFTYNVLLSALSEAGRS 681
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG--MGPDQRSYT 470
E +L ++ +G K+ + +K V K ++E G G DQ SY
Sbjct: 682 VEAQKMLHKLNESG-KLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYN 740
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517
I L G+L++A + EM KGM + T I + + IK ++R
Sbjct: 741 KYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQKR 787
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 105/256 (41%), Gaps = 39/256 (15%)
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
+ +I + P+ T+ V+ KG L AL M G PD VT N +++A C
Sbjct: 197 FHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCR 256
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKH---------------------------- 371
K + EA +L MK G +P TYN+L+
Sbjct: 257 KGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWT 316
Query: 372 -------LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLER 421
LC+ +++ ++ DEMEQ G P+ +T+N L+ + ++ + +LE
Sbjct: 317 YNVLAAGLCQAGKVDEAFKLKDEMEQL-GIVSPDVVTYNTLVDACFKCQRSSDALNLLEE 375
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M G K S T+N+I+K ++ E M ++G+ PD +Y +I G
Sbjct: 376 MREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGN 435
Query: 482 LEDALSYFHEMRLKGM 497
+ A EM G+
Sbjct: 436 VAKAFVLMDEMVRSGL 451
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 42/269 (15%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
+P + +N ++ L + E I +E+ ++ ++ TY I+++ Y +E+A
Sbjct: 522 TPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQ 581
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGW 267
++ E D+ L+ LC Y +E A FES EK + D+ T N ++
Sbjct: 582 FHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGK-KVDVITYNTLIQAL 640
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR---- 323
C +V A RF+ D+ +PD TY ++AL++ G+ A ++ + E G+
Sbjct: 641 CKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGR 700
Query: 324 ---------------------KPDVVTC-----------NCIIDALCFKKRIPEALEVLR 351
K D+ + N I LC ++ EA VL
Sbjct: 701 FFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLD 760
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
EM +G + +TY +L++ L K ++ +T
Sbjct: 761 EMMQKGMSVDNSTYITLMEGLIKRQKRQT 789
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 189/416 (45%), Gaps = 62/416 (14%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
++A + + +++ G P S ++ ++ L R E +++ +EM PD+ +T
Sbjct: 217 DSACSLLRDMTKHG-CVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDV---QT 272
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA---FQNLLL-WLCRYKHVEVAETFF 246
+ +++ A + EA + DR L D +A Q L+ LCR V+ A
Sbjct: 273 FNDVIHGLCKAGRIHEAAKLHDRML----LRDFTADALIQGYLMHGLCRMGKVDEARAML 328
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF-WKDIIKSKCEPDSVTYATFVNALTKK 305
N + N ++NG+ V G EAK +K+++ + EPD+ T+ ++ L KK
Sbjct: 329 SKIPNP---NTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKK 385
Query: 306 GKLGTALRLFQAMWEKGRKPDVVT--------C--------------------------- 330
G L +AL M +KG +P+V+T C
Sbjct: 386 GYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGY 445
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
NC+I ALC +I +AL++ EM ++GC P++ T+NSLI LCK +ME +M
Sbjct: 446 NCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL 505
Query: 391 KNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ + N +T+N L+ + + E + ++ M GC + TYN ++K
Sbjct: 506 E--GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGAT 563
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+K E+M + + P S ++I+ G++ DAL + +M +G+ P+ T
Sbjct: 564 EKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVT 619
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 176/358 (49%), Gaps = 8/358 (2%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
D++ + + ++ L R + E + ++P+ N Y L+N Y + EEA +
Sbjct: 300 DFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN-PNTVLYNTLINGYVVSGRFEEAKDL 358
Query: 211 FDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWC 268
+ + D F ++ LC+ ++ A F E K F ++ T I+++G+C
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G+ EA + + ++V Y + AL K GK+ AL+++ M KG KPD+
Sbjct: 419 KQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIY 478
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T N +I LC ++ EAL + R+M G + N TYN+LI +++ ++ + + EM
Sbjct: 479 TFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM 538
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ C + IT+N L+K+L K E+ ++E+M S ++ N+++ +
Sbjct: 539 RFR--GCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTG 596
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +M ++G+ PD +Y +I+GL GR ++AL+ F+ ++ KG+ P+ T
Sbjct: 597 KVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVT 654
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 182/452 (40%), Gaps = 91/452 (20%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTY 191
D + F+ + Y +V+ ++D LG F + ++ +M D V +++
Sbjct: 72 LDVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESL 131
Query: 192 GILLNRY--------AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA- 242
IL+ RY A ++ + GV+ F ++ +L L +VA
Sbjct: 132 FILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTF------KSYNVVLEILVAGNCPKVAP 185
Query: 243 ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
F++ + T +++ +C++ V A +D+ K C P+S+ Y ++AL
Sbjct: 186 NVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHAL 245
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV------------- 349
++ ++ A++L + M+ G +PDV T N +I LC RI EA ++
Sbjct: 246 SENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADA 305
Query: 350 ------------------LREMKNRGCLPNVTTYNSLIK--------------------- 370
R M ++ PN YN+LI
Sbjct: 306 LIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVI 365
Query: 371 ---------------HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP--- 412
LCK + + E+LDEM +K PN IT+ L+ K
Sbjct: 366 AGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFE--PNVITYTILIDGFCKQGHF 423
Query: 413 EEVPWVLERMERNGCKMSTDTYNVIL-KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
EE V+ M G ++T YN ++ L + +D ++ + EM KG PD ++
Sbjct: 424 EEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQ-MYGEMSSKGCKPDIYTFNS 482
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+I+GL ++E+AL + +M L+G++ T
Sbjct: 483 LIYGLCKNDKMEEALGLYRDMLLEGVIANTVT 514
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 142/331 (42%), Gaps = 49/331 (14%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
L + LI + RF+ EA +K + G + P + FN ++D L + V ++
Sbjct: 337 VLYNTLINGYVVSGRFE-EAKDLLYKNMVIAG-FEPDAFTFNIMIDGLCKKGYLVSALEF 394
Query: 179 FDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
DEM P+++ TY IL++ + EEA V + G + + L+
Sbjct: 395 LDEMVKKGFEPNVI---TYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGA 451
Query: 233 LCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK---- 287
LC+ ++ A + + E DI T N ++ G C + EA ++D++
Sbjct: 452 LCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIAN 511
Query: 288 -------------------------------CEPDSVTYATFVNALTKKGKLGTALRLFQ 316
C D++TY + AL K G L L +
Sbjct: 512 TVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIE 571
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M+ + P + +CN +I++ C ++ +AL+ LR+M RG P++ TYNSLI LCK+
Sbjct: 572 QMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMG 631
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
R + + ++ K P+ +T+N L+
Sbjct: 632 RFQEALNLFNGLQAK--GIHPDAVTYNTLIS 660
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P FN+++ L + + E + ++ +M + N TY L++ + ++++A +
Sbjct: 475 PDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKL 534
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCV 269
+ G D + L+ LC+ E E E + I + NI++N +C
Sbjct: 535 VGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCR 594
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G V +A +F +D+I+ PD VTY + +N L K G+ AL LF + KG PD VT
Sbjct: 595 TGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVT 654
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
N +I C++ +A ++L + + G +PN T++ LI + K
Sbjct: 655 YNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 129/284 (45%), Gaps = 12/284 (4%)
Query: 258 KTMNIILNGWCVLGNVYE-AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
K+ N++L V GN + A + D++ P T+ + A ++ +A L +
Sbjct: 166 KSYNVVLE-ILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLR 224
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M + G P+ + +I AL R+ EA+++L EM GC P+V T+N +I LCK
Sbjct: 225 DMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAG 284
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDT 433
R+ + D M ++ + + + YL+ L K +E +L ++ +T
Sbjct: 285 RIHEAAKLHDRMLLRDFT--ADALIQGYLMHGLCRMGKVDEARAMLSKIPNP----NTVL 338
Query: 434 YNVILKLYV-NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
YN ++ YV + E+ ++ M G PD ++ +MI GL KG L AL + EM
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398
Query: 493 RLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
KG P T ++ D K E K V +++ GL N
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNT 442
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 170/365 (46%), Gaps = 10/365 (2%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTY 191
D AA +F + + G + G + A+++ L RA E +V EM D V+ TY
Sbjct: 370 DLAAARNWFDEMQKRGLAADGVT-YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEK 250
+L++ Y + EA V ++ + ++ + L LC+ V A E E
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+I T N ++NG C GN+ +A R D+ ++ +PD TY T + AL + +L
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L Q M +KG KP +VT N +++ C R+ +L M + PN TTYNSL+K
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGC 427
C K M++ E M + +PNE T+N L+K K +E + M G
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQE--VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+++ +YN +++L + R +E+M K+ + + Y I +++ LE L+
Sbjct: 667 RLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLA 726
Query: 488 YFHEM 492
E+
Sbjct: 727 LCDEL 731
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 153/333 (45%), Gaps = 14/333 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N +L L A R + Q+FDEM PD+V TYGI+++ Y +E AI +
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEMASPPDVV---TYGIMVHGYCTLSELETAIKLLSEMA 312
Query: 216 EFG-ELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNV 273
G EL+ + A+ +++ LC V A E + D +++G+C G++
Sbjct: 313 ARGLELNPV-AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
A+ ++ ++ K D VTY +N L + G+L A R+ Q M +KG D VT +
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
ID C ++ EA V +M + PNV TY +L LCK + E L EM K
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491
Query: 394 SCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
N T+N L+ L K E+ + M+ G K TY I+ D+
Sbjct: 492 EL--NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+EM KG+ P +Y V+++G GR+E
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 149/355 (41%), Gaps = 45/355 (12%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
R+ SP NA+L L E +Q+F E+P+ N +Y ILL A +++A
Sbjct: 218 RQYGISPSPESCNAVLCRLP----LDEAVQLFQELPE-KNTCSYNILLKALCTAGRIKDA 272
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILN 265
+FD E D+ + ++ C +E A SE G ++ + ++
Sbjct: 273 HQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLL-SEMAARGLELNPVAYTSVIA 328
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G V +A R +D++ D+ + T ++ +KG L A F M ++G
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D VT +I+ LC + EA VL+EM+++G + TY LI CK+ +M +
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
++M QK + PN +T+ L L K +V E +
Sbjct: 449 NKMVQKRVT--PNVVTYTALSDGLCKQGDVCAANELLH---------------------- 484
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
EM KG+ + +Y +I+GL G LE A+ +M G+ P+
Sbjct: 485 ----------EMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 130/304 (42%), Gaps = 43/304 (14%)
Query: 233 LCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LCR E + F E EKN Y NI+L C G + +A + + ++ PD
Sbjct: 233 LCRLPLDEAVQLFQELPEKNTCSY-----NILLKALCTAGRIKDAHQLFDEMASP---PD 284
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
VTY V+ +L TA++L M +G + + V +I LC + ++ +A+ V+
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVE 344
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+M G + + + +++ C+ + + DEM+++ + + +T+ L+ L +
Sbjct: 345 DMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA--DGVTYTALINGLCR 402
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
E L+ ER +EME KG+ D +YTV
Sbjct: 403 AGE----LKEAER----------------------------VLQEMEDKGLDVDAVTYTV 430
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLG 531
+I G G++ +A ++M K + P T ++D K + + + ++ S G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Query: 532 LKGN 535
L+ N
Sbjct: 491 LELN 494
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 176/373 (47%), Gaps = 40/373 (10%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N ++D L + +F +M PD+V TY L++ + +++E I +F+
Sbjct: 59 YNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIV---TYNSLIDGHGKLGLLDECICIFE 115
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLG 271
+ K+ D+ + L+ C+++ + A F E + N ++ T + ++ +C G
Sbjct: 116 QMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEG 175
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ EA +F+ D+ + P+ TY + ++A K G L AL+L + + + G K +VVT
Sbjct: 176 MLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYT 235
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
++D LC + R+ EA EV R M N G PN TY +L+ K K ME + L EM++K
Sbjct: 236 ALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 295
Query: 392 NGSCL-PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW--- 444
C+ P+ + + +L L + EE ++ ++ +G + Y ++ Y
Sbjct: 296 ---CIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 352
Query: 445 --------------------DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
+C + + ++EM KGM PD+ +YT +I G G L++
Sbjct: 353 TEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQE 412
Query: 485 ALSYFHEMRLKGM 497
AL+ M GM
Sbjct: 413 ALNLRDRMIEIGM 425
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 145/305 (47%), Gaps = 12/305 (3%)
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK---- 258
M+EEA F + ++F + LL L + +++ FF K+ IK
Sbjct: 1 MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFF---KDMGAAGIKRSVF 57
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T NI+++ C G++ A+ + + ++ PD VTY + ++ K G L + +F+ M
Sbjct: 58 TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 117
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
+ PDV+T N +I+ C +R+P+A E L EMK G PNV TY++ I CK +
Sbjct: 118 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 177
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME---RNGCKMSTDTYN 435
+ ++ +M + + PNE T+ L+ + K + L+ +E + G K++ TY
Sbjct: 178 QEAIKFFVDM--RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYT 235
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+L + + M G+ P+Q +YT ++HG +E A EM+ K
Sbjct: 236 ALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 295
Query: 496 GMVPE 500
+ P+
Sbjct: 296 CIKPD 300
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 135/290 (46%), Gaps = 6/290 (2%)
Query: 240 EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
E +E F + K ++ N +L+ +G +++F+KD+ + + TY +
Sbjct: 4 EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMI 63
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ L K+G L A LF M E G PD+VT N +ID + E + + +MK+ C
Sbjct: 64 DYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD 123
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVP 416
P+V TYN+LI CK +RM +E+L EM K PN +T++ + + K +E
Sbjct: 124 PDVITYNALINCFCKFERMPKAFEFLHEM--KANGLKPNVVTYSTFIDAFCKEGMLQEAI 181
Query: 417 WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
M R + TY ++ + EE+ + G+ + +YT ++ GL
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241
Query: 477 YDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK 526
++GR+++A F M G+ P T + IK KE E K ++K
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEM-EYAKDILK 290
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 175/432 (40%), Gaps = 74/432 (17%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D E A + F + +E ++P +N+++D G+ E I +F++M PD++
Sbjct: 71 DLEMARSLFTQM-KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVI-- 127
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY L+N + + +A K G ++ + + C+ ++ A FF
Sbjct: 128 -TYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVD 186
Query: 249 EK------NEFGY------------------------------DIKTMNIILNGWCVLGN 272
+ NEF Y ++ T +L+G C G
Sbjct: 187 MRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGR 246
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+ EA+ ++ ++ + P+ TY V+ K ++ A + + M EK KPD++
Sbjct: 247 MKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGT 306
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL-----------------------I 369
I+ LC + R+ EA ++ E+K G N Y +L +
Sbjct: 307 ILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLV 366
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNG 426
LCK E + DEM K +P++I + L+ K + L +RM G
Sbjct: 367 DGLCKNNCFEVAKKLFDEMLDK--GMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 424
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
++ Y ++ + K R+ +EM KG+ PD+ Y +I Y G++++AL
Sbjct: 425 MELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEAL 484
Query: 487 SYFHEMRLKGMV 498
+EM +GM+
Sbjct: 485 ELQNEMAKRGMI 496
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 5/214 (2%)
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P +CN ++ L R + + ++M G +V TYN +I +LCK +E
Sbjct: 19 PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSL 78
Query: 385 LDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
+M K P+ +T+N L+ L +E + E+M+ C TYN ++ +
Sbjct: 79 FTQM--KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCF 136
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
++ K EM+ G+ P+ +Y+ I +G L++A+ +F +MR + P
Sbjct: 137 CKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNE 196
Query: 502 RTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
T + D N K E K V ++ G+K N
Sbjct: 197 FTYTSLIDANCKAGNLAEALKLVEEILQAGIKLN 230
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 13/180 (7%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N Y L++ Y + EA+ + L +L+ LC+ EVA+ F
Sbjct: 335 NAVIYTTLMDAYFKSGQATEALTL------------LEEMLDLVDGLCKNNCFEVAKKLF 382
Query: 247 ESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ ++ D +++G GN+ EA +I+ E D Y + L+
Sbjct: 383 DEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHS 442
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G++ A L M KG PD V C+I ++ EALE+ EM RG + ++ +
Sbjct: 443 GQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDH 502
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 163/346 (47%), Gaps = 10/346 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVF-D 212
P N +L L +A + + +F + + T IL+N + ++++A+ +F +
Sbjct: 36 PNLRDINLLLASLCQAGTMDQAMAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHE 95
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGN 272
K F + + + + ++ C+ ++ A E E + D+ + + G+C
Sbjct: 96 MEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLE-ESSCCSSDVIAITSVARGFCKAQR 154
Query: 273 VYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
V EA + D+++ K +PD V + ++ K G++ A + + + G P+ VT
Sbjct: 155 VDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYT 214
Query: 332 CIIDALCFKKRIPEALEVLREMKNRG--CLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ID C + EAL++ + + +R PNV T+N+LI LCK R+E +E + +M+
Sbjct: 215 TLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMK 274
Query: 390 QKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
++ + T+ L+ L K EV V E M R GC S TY ++ +
Sbjct: 275 ARDLR--ADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGS 332
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ M KG+ PD +YTV++ GL++ G++ A +F ++
Sbjct: 333 LQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKI 378
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 160/359 (44%), Gaps = 14/359 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P F+ ++ L +A R E ++ +++M + + N + +LL A +++A+ +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN-EFGYDIKTMNIILNGWC 268
F + + L+ N C + ++ A E F E EKN + T I+ +C
Sbjct: 61 FRGIQCSPSVITLNILIN---GFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK-GRKPDV 327
+ + +A++ ++ S C D + + K ++ A +L M EK KPD+
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
V N II C R+ EA E+L + + GC+PN TY +LI CK + +
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNW 444
+ ++ PN +TFN L+ L K + + E +M+ + T TY ++
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+V +EEM ++G P +YT ++H G L+DA M KG+ P+ T
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTT 354
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 155/375 (41%), Gaps = 50/375 (13%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKT-YGILLNRYAAAHMVEEAI 208
SP N +++ + + +++F EM LV E T Y ++ Y +++A
Sbjct: 67 SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQAR 126
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNG 266
+ + D+ A ++ C+ + V+ A EK DI N+I++G
Sbjct: 127 QLLEESSCCS--SDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHG 184
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR--K 324
+C G V EA + ++ C P++VTY T ++ K G L AL+LF+ + + +
Sbjct: 185 FCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAE 244
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNR---------------------------- 356
P+VVT N +I LC R+ A E++++MK R
Sbjct: 245 PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304
Query: 357 -------GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
GC P+V TY +L+ CK ++ + + M K P+ T+ LL+ L
Sbjct: 305 FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIP--PDVTTYTVLLEGL 362
Query: 410 ---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K E++ R C Y+ +++ D+ + EM + + PD
Sbjct: 363 FENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDP 422
Query: 467 RSYTVMIHGLYDKGR 481
+ +++ L +GR
Sbjct: 423 ATCKLLVEMLCKRGR 437
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 4/210 (1%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DL-VNEKTYGI 193
EA F SR+ P FNA++ L +A R ++ +M DL + TY
Sbjct: 228 EALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTT 287
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNE 252
L++ E VF+ G + + L+ C+ ++ A+ S
Sbjct: 288 LMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKG 347
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D+ T ++L G G V A F++ I++ +C P +V Y+ V K + A+
Sbjct: 348 IPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAV 407
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ + M ++ PD TC +++ LC + R
Sbjct: 408 KYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 170/366 (46%), Gaps = 20/366 (5%)
Query: 152 YSPGSNVFNAILDVLGRARRFVEL----IQVFDEMPDLVNEKTYGILLNRYAAAHMVEE- 206
++ G + + LD+ R RR +L + +F +T+ IL R A + +
Sbjct: 88 HAVGPSTLDLALDLSARLRRPRQLTNSILGLFPRHRLAFTPRTFPILFERLAVSQRRPDL 147
Query: 207 AIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILN 265
A+ +F + DL F +LL L + +H A + + + F D+ T N + +
Sbjct: 148 AVRLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQRFTPDVVTYNTLAD 207
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR-- 323
GWC + + A + +++S P TY + + G+L A F M ++G
Sbjct: 208 GWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKD 267
Query: 324 ---KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KPDVV+ ++ L ++ +A +V EM GC P+V TYN+LI+ +CK +E
Sbjct: 268 ESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVED 327
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
D M K +PN +T+ L++ L K + +LERM+ GC+ TYNV+
Sbjct: 328 AVTVFDGMRVKG--YVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVL 385
Query: 438 LKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLED---ALSYFHEMR 493
++ +K +E+M K + P+Q +Y ++I ++ + R ED A EM
Sbjct: 386 IRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVEEMV 445
Query: 494 LKGMVP 499
+G +P
Sbjct: 446 DRGYLP 451
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 120/239 (50%), Gaps = 15/239 (6%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D + + ++AL+K G A L +A+ E+ PDVVT N + D C K AL+VL
Sbjct: 164 DLPLFNSLLDALSKSRHAGKAASLVRAL-EQRFTPDVVTYNTLADGWCRVKDTSRALDVL 222
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ---KNGSCLPNEITFNYLLK 407
R M G P TTYN ++K + ++ +++ +M++ K+ SC P+ +++ ++
Sbjct: 223 RLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVH 282
Query: 408 SLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYV-NWDCEDKVRHTWEEMEKKGMG 463
L + E+ V + M + GC S TYN ++++ + ED V ++ M KG
Sbjct: 283 GLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAV-TVFDGMRVKGYV 341
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
P+ +YTV+I GL G+++ L M+ G P +V N+ ++ E+G+
Sbjct: 342 PNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEP------IVQTYNVLIRYLFEEGE 394
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 32/264 (12%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-----------PDLVNEKTYGILLNR 197
E +P +N IL RA + F +M PD+V +Y +++
Sbjct: 227 ESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVV---SYTTMVHG 283
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-- 255
A +E+A VFD + G ++ + L+ +C+ +VE A T F+ + + GY
Sbjct: 284 LGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVK-GYVP 342
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
++ T +++ G C G + + + + CEP TY + L ++G++ L LF
Sbjct: 343 NVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLF 402
Query: 316 QAMWEKGRK--PDVVTCNCIIDALCFKKRIPE---ALEVLREMKNRGCLPNVTTYNSLIK 370
+ M KG + P+ T N II A+ +KR + A ++ EM +RG LP +N ++
Sbjct: 403 EKM-SKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVEEMVDRGYLPRRFMFNRVLN 461
Query: 371 HLC---------KIKRMETVYEYL 385
L K+ RM+ Y L
Sbjct: 462 GLMLTGNQELSRKLLRMQEKYRRL 485
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 163/355 (45%), Gaps = 14/355 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK-----TYGILLNRYAAAHMVEEAI 208
P +N +++ L + +F E +++ M NE+ TY L++ + ++ A
Sbjct: 228 PNIPSYNVMINGLCKCGKFDESFEIWHRMKK--NERGQDLYTYSTLIHGLCGSGNLDGAT 285
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
V+ E G D+ + +L R +E ++ + E + + NI++ G
Sbjct: 286 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLF 345
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP-DV 327
V EA W+ + + C DS+TY V+ L K G L AL + + E GR D
Sbjct: 346 ENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA-ENGRGDLDT 404
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I+ LC + R+ E VL +M GC PN N++I + ++E +
Sbjct: 405 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGN 464
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
M K C P +T+N L+ L K E E +++ M + G K + TY++++
Sbjct: 465 MVSK--GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQG 522
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D + W + +KG PD + + ++IHGL G++EDAL + EM+ + VP
Sbjct: 523 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVP 577
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 165/350 (47%), Gaps = 40/350 (11%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N ++ L + E I +++ +P+ + TYG+L++ + +A+ + + +
Sbjct: 337 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 396
Query: 216 EF-GELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
G+LD A+ +++ LCR + EVA + K+ + N ++NG+ +
Sbjct: 397 NGRGDLDTF-AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKL 455
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+A RF+ +++ C P VTY T +N L+K + A L + M +KG KP+++T + +
Sbjct: 456 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLL 515
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
++ LC K++ AL + + +G P+V +N +I LC ++E + EM+Q+N
Sbjct: 516 MNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRN- 574
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
C+PN +T N L++ K + ++
Sbjct: 575 -CVPNLVTHNTLMEGFYKVRDF--------------------------------ERASKI 601
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
W+ + + G+ PD SY + + GL R+ DA+ + ++ +G++P T
Sbjct: 602 WDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAIT 651
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 169/379 (44%), Gaps = 28/379 (7%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLN 196
+A + F V+R YS VF+ IL ++FD P LV
Sbjct: 24 HSALSIFDSVTRFPGYSHTPYVFHHILK------------RLFD--PKLVAHA------- 62
Query: 197 RYAAAHMVEEAIGVFDRRKE-FGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFG 254
YA M ++A+ +F R E FG + ++ +LL L + AE+FF E
Sbjct: 63 -YAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLS 121
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
+++T NI++ C +AK + PD +Y T +N+L K G + AL+L
Sbjct: 122 PNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKL 181
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL-REMKNRGCLPNVTTYNSLIKHLC 373
F M E+G PDV N +ID K I A E+ R +K PN+ +YN +I LC
Sbjct: 182 FDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLC 241
Query: 374 KIKRMETVYEYLDEMEQ-KNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD 432
K + + +E M++ + G L T + L + V + M NG
Sbjct: 242 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 301
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
YN +L Y+ ++ W+ MEK+G SY ++I GL++ ++++A+S + +
Sbjct: 302 VYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELL 360
Query: 493 RLKGMVPEPRT-GILVNDM 510
K + T G+LV+ +
Sbjct: 361 PEKDCCADSMTYGVLVHGL 379
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 166/377 (44%), Gaps = 53/377 (14%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
W+ A +FF + G SP +N ++ + R ++F + ++ + M PD+
Sbjct: 105 WDEAESFFLYFETMG-LSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVF--- 160
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
+YG L+N A + +A+ +FD E G D++ + L+ + + A +E
Sbjct: 161 SYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL 220
Query: 250 -KNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
K Y +I + N+++NG C G E+ W + K++ D TY+T ++ L G
Sbjct: 221 LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 280
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L A R+++ M E G PDVV N +++ RI E LE+ + M+ GC V +YN
Sbjct: 281 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNI 339
Query: 368 LIKHL---CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER 424
LI+ L K+ +++E L E + C + +T+ L+ L K
Sbjct: 340 LIRGLFENAKVDEAISIWELLPEKD-----CCADSMTYGVLVHGLCK------------- 381
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
NG Y+N K EE E D +Y+ MI+GL +GRL++
Sbjct: 382 NG--------------YLN-----KALSILEEAENGRGDLDTFAYSSMINGLCREGRLDE 422
Query: 485 ALSYFHEMRLKGMVPEP 501
+M G P P
Sbjct: 423 VAGVLDQMTKHGCKPNP 439
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 117/237 (49%), Gaps = 11/237 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P V NA+++ RA + + ++ F M P +V TY L+N + A EA
Sbjct: 437 PNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV---TYNTLINGLSKAERFSEA 493
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNG 266
+ + G ++ + L+ LC+ K +++A + ++ + F D+K NII++G
Sbjct: 494 YALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 553
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G V +A + + ++ + C P+ VT+ T + K A +++ + + G +PD
Sbjct: 554 LCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPD 613
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK-RMETVY 382
+++ N + LC RI +A+ L + +RG LP T+N L++ +K ME V+
Sbjct: 614 IISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVF 670
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 170/361 (47%), Gaps = 15/361 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N+ + L + R + +Q +M PD+V +Y L+ Y + +
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV---SYNTLIYGYCRLGNLMK 392
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILN 265
A +FD + + + LL LCR +EVA+ NE DI T I++N
Sbjct: 393 AFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C +G++ A+ F+ +++ E DS YAT + K G A L + M KG P
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP 512
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D++ N ++D LC + EA E+L++M + G +P+ TY S+I + R+ E
Sbjct: 513 DLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
EM K + P+ +T+ L+ + E M+ G + TYN ++
Sbjct: 573 YEMLSKGLT--PSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLC 630
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
D+ + + EM +KG+ P++ SYT++I+ + G ++ALS + +M +G+ P+
Sbjct: 631 KVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSC 690
Query: 503 T 503
T
Sbjct: 691 T 691
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 174/402 (43%), Gaps = 35/402 (8%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR-------------- 168
DL V V++ +R A F+W + + VF AIL++L +
Sbjct: 82 DLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERV 141
Query: 169 ----ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
R V+++ + + V+ K +L+ Y+ MVE+ + VFD+ + D+
Sbjct: 142 INANMHRIVDVL-IGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVK 200
Query: 225 AFQNLLLWL----CRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKR 278
+L L K VEV T EFG I T N +L+ +C G V +
Sbjct: 201 NCNRILRILRDKDLMSKAVEVYRTM-----GEFGIKPTIVTYNTLLDSYCKGGKVQQGLD 255
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
++ + C P+ VTY +N L+KKG+ A L M + G K T N +I
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 315
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
K + EAL + EM +G P V TYNS I LCK+ RM + L +M N LP+
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN--LLPD 373
Query: 399 EITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+++N L+ L + + + + + TYN +L + +
Sbjct: 374 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 433
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
EM +G+ PD +YT++++G G L A +F EM +G+
Sbjct: 434 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 9/354 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
+P +N +++ L + F + + EM V+ TY L+ Y M+ EA+
Sbjct: 266 APNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALS 325
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+ + G ++ + + + LC+ + A + + N D+ + N ++ G+C
Sbjct: 326 LQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYC 385
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
LGN+ +A + ++ P VTY T ++ L ++G+L A +L M +G PD+V
Sbjct: 386 RLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 445
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +++ C + A E EM + G + Y + I K+ + +EM
Sbjct: 446 TYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEM 505
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
K P+ I +N ++ L K EE +L++M +G TY I+ ++
Sbjct: 506 LAKGFP--PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENG 563
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
K R + EM KG+ P +YTV+IHG KGRLE A YF EM+ KG++P
Sbjct: 564 RLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILP 617
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 147/317 (46%), Gaps = 22/317 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N +LD L R Q+ EM PD+V TY IL+N + A
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV---TYTILVNGSCKMGSLSMA 463
Query: 208 IGVFDRRKEFG-ELDDLSAFQNLLLWLCRYKHVEVAETFFESEK---NEFGYDIKTMNII 263
FD G ELD + ++ L K + + F E+ F D+ N++
Sbjct: 464 QEFFDEMLHEGLELDSYAYATRIVGEL---KLGDTSRAFSLQEEMLAKGFPPDLIIYNVV 520
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++G C LGN+ EA + ++ PD VTY + ++A + G+L +F M KG
Sbjct: 521 VDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGL 580
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P VVT +I K R+ A EM+ +G LPNV TYNSLI LCK++RM+ Y
Sbjct: 581 TPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYN 640
Query: 384 YLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
+ EM +K PN+ ++ L+ ++ +E + ++M G + + T++ +LK
Sbjct: 641 FFAEMVEKG--IFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLK- 697
Query: 441 YVNWDCEDKVRHTWEEM 457
+ DC+ + E +
Sbjct: 698 QLGKDCKLQAVRQLESL 714
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 5/201 (2%)
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
+KK + L +F M + PDV CN I+ L K + +A+EV R M G P +
Sbjct: 175 SKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTI 234
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVL 419
TYN+L+ CK +++ + L EM+++ C PN++T+N L+ L K E+ ++
Sbjct: 235 VTYNTLLDSYCKGGKVQQGLDLLSEMQRRG--CAPNDVTYNVLINGLSKKGEFEQAKGLI 292
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
M + G K+S TYN ++ Y N + EEM KG P +Y I+GL
Sbjct: 293 GEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKL 352
Query: 480 GRLEDALSYFHEMRLKGMVPE 500
GR+ DA+ +M ++P+
Sbjct: 353 GRMSDAMQQLSDMLANNLLPD 373
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PDL+ Y ++++ +EEA + + G + D + +++ + H+E
Sbjct: 512 PDLI---IYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII-----HAHLENG 563
Query: 243 ------ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
E F+E + T ++++G G + A ++ ++ + P+ +TY
Sbjct: 564 RLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYN 623
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+ +N L K ++ A F M EKG P+ + +I+ C EAL + ++M +R
Sbjct: 624 SLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR 683
Query: 357 GCLPNVTTYNSLIKHL---CKIKRMETVYEYLDE 387
G P+ T+++L+K L CK++ + + LD
Sbjct: 684 GVQPDSCTHSALLKQLGKDCKLQAVRQLESLLDS 717
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 170/365 (46%), Gaps = 17/365 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP------DLVNEKTYGILLNRYAAA 201
R+ P +N ++ + + +Q+ +EM LV T+GIL++ + A
Sbjct: 169 RQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLV---TWGILIDAFCKA 225
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKT 259
++EA+G+ K G DL + +L+ C ++ + F+ E+ + I T
Sbjct: 226 GKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI-T 284
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N ++ G+C LG + EA ++ +++ P+ TY ++ L GK AL+L M
Sbjct: 285 YNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLML 344
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
+K +P+VVT N II+ LC + +ALE++ MK R P+ TYNSL+ LC ++
Sbjct: 345 QKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLD 404
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE----RMERNGCKMSTDTYN 435
+ L M + + P+ I+FN L+ L K + L+ +E+ G T N
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAG-DIVTTN 463
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++L + +K W+++ + P+ +YT MI G G L A +MRL
Sbjct: 464 ILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLS 523
Query: 496 GMVPE 500
+ P
Sbjct: 524 ELPPS 528
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 165/370 (44%), Gaps = 12/370 (3%)
Query: 141 TFFKWVSREGDYSPGSNVFNAILDV---LGRARRFVELIQVFDEMPDLVNEKTYGILLNR 197
F V GD SP + +N ++ LGR + E+ + E N TY L++
Sbjct: 268 ALFDEVLERGD-SPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDG 326
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYD 256
+EA+ + + + E ++ + ++ LC+ V A E +K D
Sbjct: 327 LCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPD 386
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNALTKKGKLGTALRL 314
T N +L G C G++ EA + ++K S +PD +++ ++ L K +L AL +
Sbjct: 387 NITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDI 446
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+ + EK D+VT N ++++ + +A+E+ +++ N +PN TY ++I CK
Sbjct: 447 YDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCK 506
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--KKPEEVPW-VLERMERNGCKMST 431
+ L +M + P+ +N LL SL K + W + E M+R+
Sbjct: 507 TGMLNVAKGLLCKM--RLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDV 564
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
++N+++ + M G+ PD +Y+ +I+ G L++A+S+F +
Sbjct: 565 ISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDK 624
Query: 492 MRLKGMVPEP 501
M G P+
Sbjct: 625 MIDSGFEPDA 634
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 126/281 (44%), Gaps = 14/281 (4%)
Query: 229 LLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
LL LCR A + E +N D+ + N ++ G+C + +A + ++ S
Sbjct: 148 LLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSG 207
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
C VT+ ++A K GK+ A+ L + M KG + D++ +I C +
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGK 267
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+ E+ RG P TYN+LI+ CK+ R++ E + M ++ PN T+ L+
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMER--GVRPNVYTYTGLID 325
Query: 408 SL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV----RHTWEEMEKK 460
L K +E +L M + + + TYN+I +N C+D + E M+K+
Sbjct: 326 GLCGVGKTKEALQLLNLMLQKDEEPNVVTYNII----INKLCKDSLVADALEIVELMKKR 381
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
PD +Y ++ GL KG L++A + M +P
Sbjct: 382 RTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 117/257 (45%), Gaps = 5/257 (1%)
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K F +++ NI+L G C +A +++ ++ PD V+Y T + + +L
Sbjct: 135 KRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELE 194
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL+L M G +VT +IDA C ++ EA+ +L+EMK++G ++ Y SLI
Sbjct: 195 KALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLI 254
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNG 426
+ C ++ DE+ ++ S P IT+N L++ L + +E + E M G
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDS--PCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ + TY ++ + M +K P+ +Y ++I+ L + DAL
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADAL 372
Query: 487 SYFHEMRLKGMVPEPRT 503
M+ + P+ T
Sbjct: 373 EIVELMKKRRTRPDNIT 389
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 166/395 (42%), Gaps = 54/395 (13%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVF---DEMPDLVNEKTYG 192
A F+++ G P + ++D L G+ + ++L+ + DE P++V TY
Sbjct: 301 ASEIFEFMMERG-VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVV---TYN 356
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEF-------------------GELD------------ 221
I++N+ +V +A+ + + K+ G+LD
Sbjct: 357 IIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKD 416
Query: 222 ------DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVY 274
D+ +F L+ LC+ + A ++ + G DI T NI+LN G+V
Sbjct: 417 SSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVN 476
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A WK I SK P+S TY T ++ K G L A L M P V NC++
Sbjct: 477 KAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLL 536
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+LC K + +A + EM+ P+V ++N +I K +++ L M S
Sbjct: 537 SSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLS 596
Query: 395 CLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
P+ T++ L+ K +E ++M +G + + +LK ++ DK+
Sbjct: 597 --PDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLT 654
Query: 452 HTWEEMEKKGMGPDQR-SYTVMIHGLYDKGRLEDA 485
+++ K + D+ + TVM + G ++ A
Sbjct: 655 EFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIA 689
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 170/365 (46%), Gaps = 10/365 (2%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTY 191
D AA +F + + G + G + A+++ L RA E +V EM D V+ TY
Sbjct: 370 DLAAARNWFDEMQKRGLAADGVT-YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEK 250
+L++ Y + EA V ++ + ++ + L LC+ V A E E
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+I T N ++NG C GN+ +A R D+ ++ +PD TY T + AL + +L
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L Q M +KG KP +VT N +++ C R+ +L M + PN TTYNSL+K
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGC 427
C K M++ E M + +PNE T+N L+K K +E + M G
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQE--VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+++ +YN +++L + R +E+M K+ + + Y I +++ LE L+
Sbjct: 667 RLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLA 726
Query: 488 YFHEM 492
E+
Sbjct: 727 LCDEL 731
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 155/352 (44%), Gaps = 12/352 (3%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N +L L A R + Q+FDEM PD+V TYGI+++ Y +E AI +
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEMASPPDVV---TYGIMVHGYCTLSELETAIKLLSEMA 312
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVY 274
G + A+ +++ LC V A E + D +++G+C G++
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
A+ ++ ++ K D VTY +N L + G+L A R+ Q M +KG D VT +I
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
D C ++ EA V +M + PNV TY +L LCK + E L EM K
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492
Query: 395 CLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
N T+N L+ L K E+ + M+ G K TY I+ D+
Sbjct: 493 L--NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+EM KG+ P +Y V+++G GR+E M K + P T
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTT 602
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 149/355 (41%), Gaps = 45/355 (12%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
R+ SP NA+L L E +Q+F E+P+ N +Y ILL A +++A
Sbjct: 218 RQYGISPSPESCNAVLCRLP----LDEAVQLFQELPE-KNTCSYNILLKALCTAGRIKDA 272
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILN 265
+FD E D+ + ++ C +E A SE G ++ + ++
Sbjct: 273 HQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLL-SEMAARGLELNPVAYTSVIA 328
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G V +A R +D++ D+ + T ++ +KG L A F M ++G
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D VT +I+ LC + EA VL+EM+++G + TY LI CK+ +M +
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
++M QK + PN +T+ L L K +V E +
Sbjct: 449 NKMVQKRVT--PNVVTYTALSDGLCKQGDVCAANELLH---------------------- 484
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
EM KG+ + +Y +I+GL G LE A+ +M G+ P+
Sbjct: 485 ----------EMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 130/304 (42%), Gaps = 43/304 (14%)
Query: 233 LCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LCR E + F E EKN Y NI+L C G + +A + + ++ PD
Sbjct: 233 LCRLPLDEAVQLFQELPEKNTCSY-----NILLKALCTAGRIKDAHQLFDEMASP---PD 284
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
VTY V+ +L TA++L M +G + + V +I LC + ++ +A+ V+
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVE 344
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+M G + + + +++ C+ + + DEM+++ + + +T+ L+ L +
Sbjct: 345 DMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA--DGVTYTALINGLCR 402
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
E L+ ER +EME KG+ D +YTV
Sbjct: 403 AGE----LKEAER----------------------------VLQEMEDKGLDVDAVTYTV 430
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLG 531
+I G G++ +A ++M K + P T ++D K + + + ++ S G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Query: 532 LKGN 535
L+ N
Sbjct: 491 LELN 494
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 5/253 (1%)
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
G DI T N ++ G C G + A+ ++ CEP+ +TY ++ K+G+L A
Sbjct: 11 GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 70
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+ M KG + V NC+I ALC +++ +AL + +M ++GC P++ T+NSLI LC
Sbjct: 71 VLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC 130
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMS 430
K+ + E +M + + N IT+N L+ + + +E ++ M GC +
Sbjct: 131 KVNKFEEALGLYQDMLLE--GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLD 188
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TYN ++K +K +E+M KG+ P+ S ++I+GL G ++ AL +
Sbjct: 189 DITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR 248
Query: 491 EMRLKGMVPEPRT 503
+M +G+ P+ T
Sbjct: 249 DMIHRGLTPDIVT 261
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 6/258 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + ++D + R E V DEM +N Y L++ V++A+ +
Sbjct: 47 PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNM 106
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
F G D+ F +L+ LC+ E A ++ E + T N +++ +
Sbjct: 107 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 166
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA + D++ C D +TY + AL + G + L LF+ M KG P+ ++
Sbjct: 167 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 226
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
CN +I+ LC I ALE LR+M +RG P++ TYNSLI LCK R + D++
Sbjct: 227 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL- 285
Query: 390 QKNGSCLPNEITFNYLLK 407
Q G C P+ IT+N L+
Sbjct: 286 QVEGIC-PDAITYNTLIS 302
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 110/234 (47%), Gaps = 6/234 (2%)
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+ ++ C PD TY T + L KKG L +A L M KG +P+V+T +ID C +
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
R+ EA VL EM +G N YN LI LCK ++++ +M K C P+
Sbjct: 63 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK--GCKPDIF 120
Query: 401 TFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
TFN L+ L K EE + + M G +T TYN ++ ++ + +M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP-RTGILVNDM 510
+G D +Y +I L G +E L+ F +M KG+ P IL+N +
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGL 234
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 145/336 (43%), Gaps = 38/336 (11%)
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
AR + +Q+ P+++ TY IL++R+ +EEA V D G + +
Sbjct: 33 ARELMNEMQIKGCEPNVI---TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 89
Query: 229 LLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
L+ LC+ + V+ A F + DI T N ++ G C + EA ++D++
Sbjct: 90 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 149
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
+++TY T ++A ++G + AL+L M +G D +T N +I ALC I + L
Sbjct: 150 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGL 209
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+ +M ++G PN + N LI LC+ ++ E+L +M + + P+ +T+N L+
Sbjct: 210 ALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT--PDIVTYNSLIN 267
Query: 408 SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
L K L + +++++ +G+ PD
Sbjct: 268 GLCKTGRAQEAL--------------------------------NLFDKLQVEGICPDAI 295
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+Y +I +G +DA G +P T
Sbjct: 296 TYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVT 331
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 5/186 (2%)
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+ ++M G PD+ T N +I LC K + A E++ EM+ +GC PNV TY LI C
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER---MERNGCKMS 430
K R+E LDEM K G L N + +N L+ +L K E+V L M GCK
Sbjct: 61 KEGRLEEARNVLDEMSGK-GLAL-NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPD 118
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
T+N ++ + ++ +++M +G+ + +Y +IH +G +++AL +
Sbjct: 119 IFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN 178
Query: 491 EMRLKG 496
+M +G
Sbjct: 179 DMLFRG 184
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 118/243 (48%), Gaps = 7/243 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGI 193
+ A F +S +G P FN+++ L + +F E + ++ +M + N TY
Sbjct: 101 QDALNMFGDMSSKG-CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 159
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFG-ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
L++ + ++EA+ + + G LDD++ + L+ LCR ++E FE ++
Sbjct: 160 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT-YNGLIKALCRAGNIEKGLALFEDMMSK 218
Query: 253 -FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ + NI++NG C GN+ A F +D+I PD VTY + +N L K G+ A
Sbjct: 219 GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEA 278
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L LF + +G PD +T N +I C + +A +L + G +PN T+ L+ +
Sbjct: 279 LNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSN 338
Query: 372 LCK 374
K
Sbjct: 339 FIK 341
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKL 514
E M G GPD +Y +I GL KG L A +EM++KG P T ++ D K
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK- 61
Query: 515 KERGEQGKKVI-KLTSLGLKGNA 536
+ R E+ + V+ +++ GL NA
Sbjct: 62 EGRLEEARNVLDEMSGKGLALNA 84
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 147/345 (42%), Gaps = 6/345 (1%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
+NA++ RA + ++ +P N TY ++ A + +A+ V D G
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
+ +L CR A E D+ N++LN C G+V EA
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 212
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+D+ CEPD V+Y + L + G L + M P++VT N +I L
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C EVL +M GC P++ Y ++I +CK +E +E L+ M P
Sbjct: 273 CRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK--P 330
Query: 398 NEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N + +N LLK L EE +L M C + T+N+++ + D+V
Sbjct: 331 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELL 390
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
E+M ++G PD +YT +I+G +G +++A+ M G P
Sbjct: 391 EQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 161/360 (44%), Gaps = 15/360 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P FN ++ L R F + +V +M PD+ + Y +++ +E A
Sbjct: 260 PNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI---RMYATIIDGICKEGHLEVA 316
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNG 266
+ +R +G ++ + LL LC + E E E + D T NI+++
Sbjct: 317 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 376
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C G V + +++ C PD +TY T +N K+G + A+ L ++M G KP+
Sbjct: 377 FCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 436
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
++ ++ LC +R +A +++ +M +GC N T+N+LI LCK +E E L
Sbjct: 437 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 496
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+M NG C P+ I+++ ++ L K +E +L M G +T Y+ I
Sbjct: 497 QM-LVNG-CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSR 554
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+KV ++ ++ + D Y +I L +G E A+ + M G VP T
Sbjct: 555 EGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNEST 614
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 115/277 (41%), Gaps = 45/277 (16%)
Query: 159 FNAILDVL---GRARRFVELIQVFDE---MPDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
FN ++D G R +EL++ E MPD++ TY ++N + +++EA+ +
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLERGCMPDVI---TYTTVINGFCKEGLIDEAVMLLK 426
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
G + ++ +L LC + V+ + + + + T N ++N C G
Sbjct: 427 SMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKG 486
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP------ 325
V +A K ++ + C PD ++Y+T ++ L K GK AL L M KG P
Sbjct: 487 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 546
Query: 326 -----------------------------DVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
D V N +I +LC + A+E L M +
Sbjct: 547 SIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 606
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
GC+PN +TY LI+ L ++ E L E+ K
Sbjct: 607 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGA 643
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 184/434 (42%), Gaps = 52/434 (11%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFD--------WEAAYTFFKWVSREGDYSPGSNVF 159
E+ KAL+ E TL D L+ + E AY + + R+ P +N F
Sbjct: 297 EVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM-RDHGLLPSTNEF 355
Query: 160 NAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF 217
N ++ L + + + + +F EM D + + TY IL++ + EA+ ++++ E
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNET 415
Query: 218 GELDDLSAFQNLLLWLCR-------------------YKHVEVAETFFESEKNEFGYDIK 258
G + + +LLL C +V T + N+ +D
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKA 475
Query: 259 -----------------TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
T N ++NG CV+G V E K P ++TY + +N
Sbjct: 476 YALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIING 535
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K G +G+A ++Q M KG P++VT ID C AL++L +++ +G P+
Sbjct: 536 FIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPD 595
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL---KSLKKPEEVPWV 418
+ YNSLI C+ M + L M K+G LPN +N + K+LK EE +
Sbjct: 596 IAAYNSLIFGFCQEGNMSHALQVLVLM-LKDG-LLPNISVYNSFITGYKNLKMMEEALRL 653
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
E+M + G + T TY ++ + + EM KG PD ++T + HGL
Sbjct: 654 YEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCR 713
Query: 479 KGRLEDALSYFHEM 492
G ++DA EM
Sbjct: 714 NGDIDDARKLLDEM 727
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 167/379 (44%), Gaps = 48/379 (12%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI-----LLNRYAAAH 202
++ + P FN+++DVL + R E + + DE+ L K + L++ Y
Sbjct: 239 QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDEL--LATGKKMSVVLATTLMHGYCLQR 296
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLW------------LCRYKHVEVAETFFESEK 250
V +A+ +F+ G + + L+ LCR ++ +
Sbjct: 297 EVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCR----QMRDHGLLPST 352
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE------PDSVTYATFVNALTK 304
NEF IK + LN + WKD + E PD+ TY ++ L +
Sbjct: 353 NEFNMVIKGL---LN-----------DKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQ 398
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
+ K+ AL L++ M E G KP +VT + ++ C + EA+++ EM +G PNV T
Sbjct: 399 RRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVT 458
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLER 421
Y +L+K + Y L EM+Q SC N+ T+N L+ L + EV +L+R
Sbjct: 459 YTTLMKGHINKAAFDKAYALLAEMKQNGVSC--NDYTYNTLINGLCVVGRVCEVGEMLKR 516
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
E G + TYN I+ ++ +++M KG+ P+ +YT I G
Sbjct: 517 FETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSC 576
Query: 482 LEDALSYFHEMRLKGMVPE 500
+ AL +++R KG+ P+
Sbjct: 577 CDLALKMLNDVRCKGLRPD 595
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 127/267 (47%), Gaps = 14/267 (5%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P + +N+I++ +A V+ +M P++V TY ++ Y +
Sbjct: 522 FVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIV---TYTSFIDGYCKTSCCD 578
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
A+ + + + G D++A+ +L+ C+ ++ A + K+ +I N +
Sbjct: 579 LALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFI 638
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G+ L + EA R ++ +IK + D+ TY T ++ +K G + AL+L+ M KG
Sbjct: 639 TGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNI 698
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD +T + LC I +A ++L EM PNV YN LI + +++ +
Sbjct: 699 PDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRL 758
Query: 385 LDEMEQKNGSCLPNEITFNYL--LKSL 409
DEM ++ +P++ T++ L +KSL
Sbjct: 759 HDEMLERK--IMPDDTTYDILVGMKSL 783
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 118/296 (39%), Gaps = 41/296 (13%)
Query: 240 EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
+ F E +E D + ++ + C L + A + + + P T+ + V
Sbjct: 195 DAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVV 254
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL--------- 350
+ L K G++ AL + + G+K VV ++ C ++ + +AL++
Sbjct: 255 DVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLV 314
Query: 351 --------------------------REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
R+M++ G LP+ +N +IK L K +
Sbjct: 315 PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL 374
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
EM S +P+ T+N L+ L +K E + E+M G K TY+ +L Y
Sbjct: 375 FKEMAD---SGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
C D+ + EM KG P+ +YT ++ G +K + A + EM+ G+
Sbjct: 432 CVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 156/360 (43%), Gaps = 24/360 (6%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
+F+ ++ + + + +++FDEMP +++ + + A+ V +
Sbjct: 179 MFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM 238
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL-----NGWCV 269
++ G + F +++ L + +E A K+E K M+++L +G+C+
Sbjct: 239 QDAGFVPWDFTFNSVVDVLVKGGRMEEALHI----KDELLATGKKMSVVLATTLMHGYCL 294
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
V +A +++ ++ P VTY + T++G A L + M + G P
Sbjct: 295 QREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNE 354
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC---KIKRMETVYEYLD 386
N +I L K +A+ + +EM + G +P+ TYN LI LC KI+ ++E ++
Sbjct: 355 FNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMN 413
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
E K P +T++ LL +E + M G + TY ++K ++N
Sbjct: 414 ETGVK-----PYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
DK EM++ G+ + +Y +I+GL GR+ + +G VP T
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMT 528
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 38/253 (15%)
Query: 284 IKSKCEP-DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
++ K P D+ + + A K+G A+RLF M +PD C+ I +LC +
Sbjct: 168 MRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK----------- 391
AL VLR+M++ G +P T+NS++ L K RME DE+
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287
Query: 392 --NGSCL--------------------PNEITFNYLLKSLKK---PEEVPWVLERMERNG 426
+G CL P ++T+ L++ + PE+ + +M +G
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHG 347
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
ST+ +N+++K +N ++EM G+ PD +Y ++IH L + ++ +AL
Sbjct: 348 LLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREAL 406
Query: 487 SYFHEMRLKGMVP 499
+ + +M G+ P
Sbjct: 407 NLWEKMNETGVKP 419
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 13/202 (6%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRI-PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M KGR D + ++ A CFK+ + +A+ + EM P+ + I LCK++
Sbjct: 168 MRGKGRPLDAWMFDVVMRA-CFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT 433
L +M+ + +P + TFN ++ L K EE + + + G KMS
Sbjct: 227 DANRALLVLRKMQ--DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVL 284
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
++ Y K +EE + G+ P +YTV+I G ++G E A +MR
Sbjct: 285 ATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMR 344
Query: 494 LKGMVPEPRTGILVNDMNIKLK 515
G++P N+ N+ +K
Sbjct: 345 DHGLLPS------TNEFNMVIK 360
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 191/475 (40%), Gaps = 92/475 (19%)
Query: 112 ALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARR 171
A C + L+ ++ R+ +AA +F + G +P + FN++L LGRA
Sbjct: 88 AARHCIPPPSASLLSKLLARFSSPADAA-SFLRDSLAAGAPAPDVSTFNSLLSALGRAGN 146
Query: 172 FVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGE------ 219
+ ++F M PD+V TYGILLNR A +V +A+ V DR G
Sbjct: 147 LRGMTELFTSMREASVKPDIV---TYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADI 203
Query: 220 ---------LDDLSAFQNLLLWL------------------------CRYKHVEVAETFF 246
L + Q+ ++++ CR +++A
Sbjct: 204 VILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIV 263
Query: 247 ES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP--DSVTYATFVNALT 303
E EK ++ TMN I+ G C +G V A F+++ + E ++VTY+T V+A
Sbjct: 264 ERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFL 323
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVV-----------------TCNC-------------- 332
+ A+ LF M ++G PD V CN
Sbjct: 324 HCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRK 383
Query: 333 ----IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+I C KKR+ EA ++ EMK G P+V TYN+L+ LCK V E L M
Sbjct: 384 AYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNM 443
Query: 389 EQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ C P+ +TF L+ K +E + M + +T YN ++
Sbjct: 444 --IDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSR 501
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D ++EM + + + +Y ++ GL DK E A +M+ + P+
Sbjct: 502 EVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPD 556
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 144/309 (46%), Gaps = 25/309 (8%)
Query: 138 AAYTFFK-----WVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV 186
AA FF+ W+ G+ S + +A L +++F EM PD V
Sbjct: 293 AALDFFREKRTTWLEARGNAVTYSTLVSAFL----HCNNVALAMELFHEMADQGYPPDAV 348
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
Y +++ A + +A + K+ G D A+ L+ CR K + A F
Sbjct: 349 ---MYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLF 405
Query: 247 ESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E K D+ T N +L+ C G+ ++I C+P VT+ T V+ K
Sbjct: 406 EEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKA 465
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK AL++F++M E +P+ V N +ID LC + + A+++ EM+ NVTTY
Sbjct: 466 GKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTY 525
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP----WVLER 421
N+L+K L E +E +D+M+++ C P+ +T + L++ L + E ++ +R
Sbjct: 526 NALLKGLQDKNMPEKAFELMDQMKEER--CTPDYVTMDVLMEWLPEIGETERLKCFMEQR 583
Query: 422 MERNGCKMS 430
E+ G K++
Sbjct: 584 DEKGGAKLT 592
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 158/321 (49%), Gaps = 8/321 (2%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETF 245
N+ +YG LLN AI + ++ ++ + ++ LC+ K V E + +
Sbjct: 114 NQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLY 173
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E + E ++ T N ++ +C+ G + A ++I PD T++ ++AL K+
Sbjct: 174 SEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKE 233
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK A ++F AM + G P+V + N +I+ LC KR+ EA+ +LREM ++ +P+ TY
Sbjct: 234 GK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTY 291
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERM 422
NSLI LCK R+ + ++EM + + +T+ LL +L K + + + +M
Sbjct: 292 NSLIDGLCKSGRITSALNLMNEMHHRGQP--ADVVTYTSLLDALCKNQNLDKATALFMKM 349
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+ G + + TY ++ + ++ + KG D +YTVMI GL +G
Sbjct: 350 KERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMF 409
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
++AL+ +M G +P T
Sbjct: 410 DEALAIKSKMEDNGCIPNAVT 430
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 137/285 (48%), Gaps = 18/285 (6%)
Query: 252 EFGYDIKTMN--IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ GY T+ ++ G C+ G V + F ++ + + V+Y T +N L K G+
Sbjct: 73 KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A++L + + ++ +P+VV + IID LC K + EA ++ EM R PNV TYN+LI
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI 192
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-KKPEEVPWVLERMERNGCK 428
C ++ + L EM KN + P+ TF+ L+ +L K+ + + M + G
Sbjct: 193 CAFCLAGQLMGAFSLLHEMILKNIN--PDVYTFSILIDALCKEGKNAKQIFHAMVQMGVN 250
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+ +YN+++ D+ + EM K M PD +Y +I GL GR+ AL+
Sbjct: 251 PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNL 310
Query: 489 FHEMRLKGMVPEPRT-----GILVNDMNI--------KLKERGEQ 520
+EM +G + T L + N+ K+KERG Q
Sbjct: 311 MNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 355
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 148/318 (46%), Gaps = 15/318 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +++AI+D L + + E ++ EM P+++ TY L+ + A + A
Sbjct: 148 PNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVI---TYNTLICAFCLAGQLMGA 204
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
+ D+ F L+ LC+ + + F + ++ + NI++NG
Sbjct: 205 FSLLHEMILKNINPDVYTFSILIDALCK-EGKNAKQIFHAMVQMGVNPNVYSYNIMINGL 263
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C V EA ++++ PD+VTY + ++ L K G++ +AL L M +G+ DV
Sbjct: 264 CKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADV 323
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT ++DALC + + +A + +MK RG P + TY +LI LCK R++ E
Sbjct: 324 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQH 383
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
+ K C + T+ ++ L K +E + +ME NGC + T+ +I++
Sbjct: 384 LLVK--GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEK 441
Query: 445 DCEDKVRHTWEEMEKKGM 462
D DK EM KG+
Sbjct: 442 DENDKAEKLLHEMIAKGL 459
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 126/251 (50%), Gaps = 7/251 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
++ T++I++N +C LG + + I+K P+++T+ T + L KG++ L
Sbjct: 44 NLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFH 103
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ + + + V+ +++ LC A+++LR +++R PNV Y+++I LCK
Sbjct: 104 DKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKD 163
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK-MSTDTY 434
K + Y+ EM+ + PN IT+N L+ + ++ + K ++ D Y
Sbjct: 164 KLVNEAYDLYSEMDAR--EIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVY 221
Query: 435 NVILKLYVNWDCED--KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ ++ C++ + + M + G+ P+ SY +MI+GL R+++A++ EM
Sbjct: 222 T--FSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREM 279
Query: 493 RLKGMVPEPRT 503
K MVP+ T
Sbjct: 280 LHKNMVPDTVT 290
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P +N +++ L + +R E + + EM PD V TY L++ + +
Sbjct: 250 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV---TYNSLIDGLCKSGRITS 306
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIIL 264
A+ + + G+ D+ + +LL LC+ ++++ A F K E G + T ++
Sbjct: 307 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK-ERGIQPTMYTYTALI 365
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G C G + A+ ++ ++ C D TY ++ L K+G AL + M + G
Sbjct: 366 DGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCI 425
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
P+ VT II +L K +A ++L EM +G L
Sbjct: 426 PNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 117/252 (46%), Gaps = 17/252 (6%)
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
+ + + +L K T + L + M KG + ++VT + +I+ C ++ + +L +
Sbjct: 11 IEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGK 70
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
+ G PN T+ +L+K LC ++ + + D++ + N++++ LL L K
Sbjct: 71 ILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQ--TNQVSYGTLLNGLCKT 128
Query: 413 EEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH----TWEEMEKKGMGPD 465
E +L +E + + Y+ I ++ C+DK+ + + EM+ + + P+
Sbjct: 129 GETRCAIKLLRMIEDRSTRPNVVMYSAI----IDGLCKDKLVNEAYDLYSEMDAREIFPN 184
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVI 525
+Y +I G+L A S HEM LK + P+ T ++ D L + G+ K++
Sbjct: 185 VITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILID---ALCKEGKNAKQIF 241
Query: 526 -KLTSLGLKGNA 536
+ +G+ N
Sbjct: 242 HAMVQMGVNPNV 253
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 169/361 (46%), Gaps = 15/361 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N+ + L + R + +Q +M PD+V +Y L+ Y + +
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV---SYNTLIYGYCRLGNLMK 392
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILN 265
A +FD + + + LL LCR +EVA+ NE DI T I++N
Sbjct: 393 AFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C +G++ A+ F+ +++ E DS YAT + K G A L + M KG P
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP 512
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D++ N ++D LC + EA E+L++M + G +P+ TY S+I + R+ E
Sbjct: 513 DLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
EM K P+ +T+ L+ + E M+ G + TYN ++
Sbjct: 573 YEMLSKG--LTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLC 630
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
D+ + + EM +KG+ P++ SYT++I+ + G ++ALS + +M +G+ P+
Sbjct: 631 KVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSC 690
Query: 503 T 503
T
Sbjct: 691 T 691
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 174/402 (43%), Gaps = 35/402 (8%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR-------------- 168
DL V V++ +R A F+W + + VF AIL++L +
Sbjct: 82 DLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERV 141
Query: 169 ----ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
R V+++ + + V+ K +L+ Y+ MVE+ + VFD+ + D+
Sbjct: 142 INANMHRIVDVL-IGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVK 200
Query: 225 AFQNLLLWL----CRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKR 278
+L L K VEV T EFG I T N +L+ +C G V +
Sbjct: 201 NCNRILRILRDKDLMSKAVEVYRTM-----GEFGIKPTIVTYNTLLDSYCKGGKVQQGLD 255
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
++ + C P+ VTY +N L+KKG+ A L M + G K T N +I
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 315
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
K + EAL + EM +G P V TYNS I LCK+ RM + L +M N LP+
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN--LLPD 373
Query: 399 EITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+++N L+ L + + + + + TYN +L + +
Sbjct: 374 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 433
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
EM +G+ PD +YT++++G G L A +F EM +G+
Sbjct: 434 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 9/354 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
+P +N +++ L + F + + EM V+ TY L+ Y M+ EA+
Sbjct: 266 APNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALS 325
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+ + G ++ + + + LC+ + A + + N D+ + N ++ G+C
Sbjct: 326 LQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYC 385
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
LGN+ +A + ++ P VTY T ++ L ++G+L A +L M +G PD+V
Sbjct: 386 RLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 445
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +++ C + A E EM + G + Y + I K+ + +EM
Sbjct: 446 TYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEM 505
Query: 389 EQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
K P+ I +N ++ L K EE +L++M +G TY I+ ++
Sbjct: 506 LAKGFP--PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENG 563
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
K R + EM KG+ P +YTV+IHG KGRLE A YF EM+ KG++P
Sbjct: 564 RLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILP 617
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 147/317 (46%), Gaps = 22/317 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N +LD L R Q+ EM PD+V TY IL+N + A
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV---TYTILVNGSCKMGSLSMA 463
Query: 208 IGVFDRRKEFG-ELDDLSAFQNLLLWLCRYKHVEVAETFFESEK---NEFGYDIKTMNII 263
FD G ELD + ++ L K + + F E+ F D+ N++
Sbjct: 464 QEFFDEMLHEGLELDSYAYATRIVGEL---KLGDTSRAFSLQEEMLAKGFPPDLIIYNVV 520
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++G C LGN+ EA + ++ PD VTY + ++A + G+L +F M KG
Sbjct: 521 VDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGL 580
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P VVT +I K R+ A EM+ +G LPNV TYNSLI LCK++RM+ Y
Sbjct: 581 TPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYN 640
Query: 384 YLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
+ EM +K PN+ ++ L+ ++ +E + ++M G + + T++ +LK
Sbjct: 641 FFAEMVEKG--IFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLK- 697
Query: 441 YVNWDCEDKVRHTWEEM 457
+ DC+ + H M
Sbjct: 698 QLGKDCKLQAVHGTSTM 714
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 5/201 (2%)
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
+KK + L +F M + PDV CN I+ L K + +A+EV R M G P +
Sbjct: 175 SKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTI 234
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVL 419
TYN+L+ CK +++ + L EM+++ C PN++T+N L+ L K E+ ++
Sbjct: 235 VTYNTLLDSYCKGGKVQQGLDLLSEMQRRG--CAPNDVTYNVLINGLSKKGEFEQAKGLI 292
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
M + G K+S TYN ++ Y N + EEM KG P +Y I+GL
Sbjct: 293 GEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKL 352
Query: 480 GRLEDALSYFHEMRLKGMVPE 500
GR+ DA+ +M ++P+
Sbjct: 353 GRMSDAMQQLSDMLANNLLPD 373
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 160/345 (46%), Gaps = 12/345 (3%)
Query: 165 VLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
L A + +Q F PD V TY LLN + M+ EA + R K G
Sbjct: 223 TLADALATLSTMQGFGLSPDAV---TYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQP 279
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ L+ R ++ A ES +G+ D++T N++ G C G V EA R +
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVES-MTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDE 338
Query: 283 IIK-SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+ + PD VTY T V+A K ALRL + M +KG KP +VT N ++ +LC +
Sbjct: 339 MERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEG 398
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
++ EAL L ++ G P+V TYN+LI CK + + +DEM K + T
Sbjct: 399 KLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKM--DTFT 456
Query: 402 FNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
N +L +L K+ E+ +L + G +Y ++ Y + W++M
Sbjct: 457 LNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMI 516
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ + P +Y +I GL RL++A+ +E KG+VP+ T
Sbjct: 517 ERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETT 561
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 186/448 (41%), Gaps = 55/448 (12%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVS--REGDYSPGSNVFNAILDVLGRARRFVELI 176
L D + N + F W + + + R+ P N ++ L + + E +
Sbjct: 345 ALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+++ PD++ TY L++ Y A V +A + D G D +L
Sbjct: 405 GKLEKIAEEGLAPDVI---TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVL 461
Query: 231 LWLCRYKHVEVAETFFESEK------NEFGY----------------------------- 255
LC+ K E AE S +E Y
Sbjct: 462 YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLI 521
Query: 256 -DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
I T N ++ G C + + EA + ++ PD TY ++A K+G L A R
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRF 581
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
M E KPDVVTCN +++ LC ++ +AL++ +G +V TYN+LI+ +CK
Sbjct: 582 HNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK 641
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMST 431
+ ++T + D+ME K P+ T+N +L +L + EE +L ++ +G K+S
Sbjct: 642 VGDVDTALHFFDDMEVKG--LQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG-KLSQ 698
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM--IHGLYDKGRLEDALSYF 489
+LK + + K E E D T M ++GL G+L++A +
Sbjct: 699 SFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVL 758
Query: 490 HEMRLKGMVPEPRTGILVNDMNIKLKER 517
EM KGM + T I + + IK ++R
Sbjct: 759 DEMMQKGMPVDCSTYITLMEGLIKRQKR 786
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 6/225 (2%)
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
++ +I+ + P+ T+ V+ KG L AL M G PD VT N +++A C
Sbjct: 196 FRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCR 255
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
K + EA +L MK G P TYN+L+ ++ ++ + ++ M P+
Sbjct: 256 KGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFE--PDL 313
Query: 400 ITFNYLLKSL---KKPEEVPWVLERMERNGCKMS-TDTYNVILKLYVNWDCEDKVRHTWE 455
T+N L L K +E + + MER G + TYN ++ W C E
Sbjct: 314 RTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLE 373
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
EM KG+ P ++ +++ L +G+LE+AL ++ +G+ P+
Sbjct: 374 EMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPD 418
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 12/217 (5%)
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+L +F+++ E P+ T N ++ C K + +AL L M+ G P+ TYN+L+
Sbjct: 191 ASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLL 250
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNG 426
C+ + L M K P + T+N L+ + + ++ V+E M G
Sbjct: 251 NAHCRKGMLGEARALLARM--KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG-PDQRSYTVMIHGLYDKGRLEDA 485
+ TYNV+ D+ +EME+ G PD +Y ++ + DA
Sbjct: 309 FEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDA 368
Query: 486 LSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
L EMR KG+ P LV NI +K ++GK
Sbjct: 369 LRLLEEMRDKGVKP-----TLVTH-NIVVKSLCKEGK 399
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 162/355 (45%), Gaps = 14/355 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK-----TYGILLNRYAAAHMVEEAI 208
P +N +++ L + +F E +++ M NE+ TY L++ + ++ A
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKK--NERGQDLYTYSTLIHGLCGSGNLDGAT 310
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
V+ E G D+ + +L R +E ++ + E + + NI++ G
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLF 370
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP-DV 327
V EA W+ + + C DS+TY V+ L K G L AL + + E GR D
Sbjct: 371 ENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA-ENGRGDLDT 429
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I+ LC + R+ E VL +M GC PN N++I + ++E +
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
M K C P +T+N L+ L K E E +++ M G K + TY++++
Sbjct: 490 MVSK--GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D + W + +KG PD + + ++IHGL G++EDAL + EM+ + VP
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 176/386 (45%), Gaps = 17/386 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILD------VLGRARRFVELIQVFD-EMPDLVNEK 189
+A + F V+R YS VF+ IL ++ R VELI+ + P E
Sbjct: 24 HSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCP----ED 79
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKE-FGELDDLSAFQNLLLWLCRYKHVEVAETFF-E 247
++ YA M ++A+ +F R E FG + ++ +LL L + AE+FF
Sbjct: 80 VALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLY 139
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E +++T NI++ C +AK + + PD +Y T +N+L K G
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGY 199
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL-REMKNRGCLPNVTTYN 366
+ AL+LF M E+G PDV N +ID K I A E+ R +K PN+ +YN
Sbjct: 200 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 259
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQ-KNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERN 425
+I LCK + + +E M++ + G L T + L + V + M N
Sbjct: 260 VMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN 319
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G YN +L Y+ ++ W+ MEK+G SY ++I GL++ ++++A
Sbjct: 320 GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEA 378
Query: 486 LSYFHEMRLKGMVPEPRT-GILVNDM 510
+S + + K + T G+LV+ +
Sbjct: 379 ISIWELLPEKDCCADSMTYGVLVHGL 404
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 165/379 (43%), Gaps = 53/379 (13%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
W+ A +FF + G SP +N ++ + R ++F + ++ + M PD+
Sbjct: 130 WDEAESFFLYFETMG-LSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVF--- 185
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
+YG L+N A + +A+ +FD E G D++ + L+ + + A +E
Sbjct: 186 SYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL 245
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ +I + N+++NG C G E+ W + K++ D TY+T ++ L G
Sbjct: 246 LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 305
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L A R+++ M E G PDVV N +++ RI E LE+ + M+ GC V +YN
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNI 364
Query: 368 LIKHL---CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER 424
LI+ L K+ +++E L E + C + +T+ L+ L K
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKD-----CCADSMTYGVLVHGLCK------------- 406
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
NG Y+N K EE E D +Y+ MI+GL +GRL++
Sbjct: 407 NG--------------YLN-----KALSILEEAENGRGDLDTFAYSSMINGLCREGRLDE 447
Query: 485 ALSYFHEMRLKGMVPEPRT 503
+M G P P
Sbjct: 448 VAGVLDQMTKHGCKPNPHV 466
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 132/258 (51%), Gaps = 8/258 (3%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N ++ L + E I +++ +P+ + TYG+L++ + +A+ + + +
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421
Query: 216 EF-GELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
G+LD A+ +++ LCR + EVA + K+ + N ++NG+ +
Sbjct: 422 NGRGDLDTF-AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKL 480
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+A RF+ +++ C P VTY T +N L+K + A L + M KG KP+++T + +
Sbjct: 481 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLL 540
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
++ LC K++ AL + + +G P+V +N +I LC ++E + EM+Q+
Sbjct: 541 MNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR-- 598
Query: 394 SCLPNEITFNYLLKSLKK 411
C+PN +T N L++ K
Sbjct: 599 KCVPNLVTHNTLMEGFYK 616
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 162/355 (45%), Gaps = 14/355 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK-----TYGILLNRYAAAHMVEEAI 208
P +N +++ L + +F E +++ M NE+ TY L++ + ++ A
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKK--NERGQDLYTYSTLIHGLCGSGNLDGAT 310
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
V+ E G D+ + +L R +E ++ + E + + NI++ G
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLF 370
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP-DV 327
V EA W+ + + C DS+TY V+ L K G L AL + + E GR D
Sbjct: 371 ENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA-ENGRGDLDT 429
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I+ LC + R+ E VL +M GC PN N++I + ++E +
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
M K C P +T+N L+ L K E E +++ M G K + TY++++
Sbjct: 490 MVSK--GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D + W + +KG PD + + ++IHGL G++EDAL + EM+ + VP
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 176/386 (45%), Gaps = 17/386 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILD------VLGRARRFVELIQVFD-EMPDLVNEK 189
+A + F V+R YS VF+ IL ++ R VELI+ + P E
Sbjct: 24 HSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCP----ED 79
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKE-FGELDDLSAFQNLLLWLCRYKHVEVAETFF-E 247
++ YA M ++A+ +F R E FG + ++ +LL L + AE+FF
Sbjct: 80 VALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLY 139
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E +++T NI++ C +AK + + PD +Y T +N+L K G
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGY 199
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL-REMKNRGCLPNVTTYN 366
+ AL+LF M E+G PDV N +ID K I A E+ R +K PN+ +YN
Sbjct: 200 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 259
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQ-KNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERN 425
+I LCK + + +E M++ + G L T + L + V + M N
Sbjct: 260 VMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN 319
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G YN +L Y+ ++ W+ MEK+G SY ++I GL++ ++++A
Sbjct: 320 GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEA 378
Query: 486 LSYFHEMRLKGMVPEPRT-GILVNDM 510
+S + + K + T G+LV+ +
Sbjct: 379 ISIWELLPEKDCCADSMTYGVLVHGL 404
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 165/361 (45%), Gaps = 8/361 (2%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMVEE 206
E SP V+N +L+ RA R E ++++ M +Y IL+ V+E
Sbjct: 318 ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDE 377
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG-YDIKTMNIILN 265
AI +++ E D + L+ LC+ ++ A + E +N G D + ++N
Sbjct: 378 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 437
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G + E + K C+P+ +N + KL ALR F M KG P
Sbjct: 438 GLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 497
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
VVT N +I+ L +R EA +++EM ++G PN+ TY+ L+ LC+ K+++
Sbjct: 498 TVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLW 557
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+ +K P+ N ++ L K E+ + M++ C + T+N +++ +
Sbjct: 558 CQALEKGFK--PDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFY 615
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
++ W+ + + G PD SY + + GL R+ DA+ + ++ +G++P
Sbjct: 616 KVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAI 675
Query: 503 T 503
T
Sbjct: 676 T 676
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 165/379 (43%), Gaps = 53/379 (13%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
W+ A +FF + G SP +N ++ + R ++F + ++ + M PD+
Sbjct: 130 WDEAESFFLYFETMG-LSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVF--- 185
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
+YG L+N A + +A+ +FD E G D++ + L+ + + A +E
Sbjct: 186 SYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL 245
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ +I + N+++NG C G E+ W + K++ D TY+T ++ L G
Sbjct: 246 LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 305
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L A R+++ M E G PDVV N +++ RI E LE+ + M+ GC V +YN
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNI 364
Query: 368 LIKHL---CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER 424
LI+ L K+ +++E L E + C + +T+ L+ L K
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKD-----CCADSMTYGVLVHGLCK------------- 406
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
NG Y+N K EE E D +Y+ MI+GL +GRL++
Sbjct: 407 NG--------------YLN-----KALSILEEAENGRGDLDTFAYSSMINGLCREGRLDE 447
Query: 485 ALSYFHEMRLKGMVPEPRT 503
+M G P P
Sbjct: 448 VAGVLDQMTKHGCKPNPHV 466
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 153/325 (47%), Gaps = 48/325 (14%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N ++ L + E I +++ +P+ + TYG+L++ + +A+ + + +
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421
Query: 216 EF-GELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
G+LD A+ +++ LCR + EVA + K+ + N ++NG+ +
Sbjct: 422 NGRGDLDTF-AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKL 480
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTK----------------KG----------- 306
+A RF+ +++ C P VTY T +N L+K KG
Sbjct: 481 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLL 540
Query: 307 --------KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
KL AL L+ EKG KPDV N II LC ++ +AL++ EMK R C
Sbjct: 541 MNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKC 600
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL----KKPEE 414
+PN+ T+N+L++ K++ E + D + Q P+ I++N LK L + +
Sbjct: 601 VPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQ--PDIISYNITLKGLCSCHRISDA 658
Query: 415 VPWVLERMERNGCKMSTDTYNVILK 439
V ++ + ++R G + T+N++++
Sbjct: 659 VGFLNDAVDR-GVLPTAITWNILVR 682
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A FF + +G + P +N +++ L +A RF E + EM P+++ T
Sbjct: 481 EDALRFFGNMVSKGCF-PTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMI---T 536
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESE 249
Y +L+N ++ A+ ++ + E G D+ ++ LC VE A + + E +
Sbjct: 537 YSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMK 596
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ + ++ T N ++ G+ + + A + W I++ +PD ++Y + L ++
Sbjct: 597 QRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRIS 656
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDAL 337
A+ ++G P +T N ++ A+
Sbjct: 657 DAVGFLNDAVDRGVLPTAITWNILVRAV 684
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 172/390 (44%), Gaps = 49/390 (12%)
Query: 150 GDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEE 206
G Y+P ++N I+ L RA R ++ +V ++M + + N TY ILLN ++ +
Sbjct: 82 GVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKL 141
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILN 265
A VF K G + + L+ L R + E E E D+ T I+
Sbjct: 142 AREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVG 201
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK- 324
G C + +A +F +++ + P+ VTY+ V+ + G+L +R F+ EK RK
Sbjct: 202 GLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFE--EEKARKG 259
Query: 325 -------------------------------------PDVVTCNCIIDALCFKKRIPEAL 347
PDVVT + +I+ + +L
Sbjct: 260 GSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASL 319
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
E+L +M+ G P+V TY++LI LCK ++ + + L+ ME PN +T+N ++
Sbjct: 320 ELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSP--PNVVTYNSVMD 377
Query: 408 SL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
L K +EV V E M ++ C TY++I+ D +E ++ GP
Sbjct: 378 GLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGP 437
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
D +Y+++I L G+LE+A +H M +
Sbjct: 438 DAAAYSMVITSLCRAGKLEEACGMYHGMEV 467
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 158/352 (44%), Gaps = 11/352 (3%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFD 212
S F + L R +F E++++F + + E TY ++++ A M +A+ +
Sbjct: 19 SQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV- 77
Query: 213 RRKEFGELDDLSAF--QNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
+E + + F ++ LCR V A E E ++ T I+LNG C
Sbjct: 78 --RELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCR 135
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
A+ ++++ ++ C+P+ +TY T + L++ G++ ALR+ DV+T
Sbjct: 136 SNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVIT 195
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
C I+ LC R+ +AL+ + EM+ G PN TY++L+ + ++ V + +E +
Sbjct: 196 CTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEK 255
Query: 390 QKNGSCLPNEITFNYLLKSLKKP--EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ G L YL K + +E + ++G TY++++ +
Sbjct: 256 ARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQF 315
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D E+M + G+ PD +Y+ +I+ L + + +DA M G P
Sbjct: 316 DASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPP 367
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 8/261 (3%)
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N I+ G C V +A + + +++ P+ TY +N L + K A +FQ M
Sbjct: 92 NGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKR 151
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G KP+ +T +I L I EAL V+ E ++ +V T +++ LCK R++
Sbjct: 152 NGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDD 211
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL----ERMERNGCKMSTDTYNV 436
++++EM Q PNE+T++ L+ ++ E+ V+ E R G + Y
Sbjct: 212 ALKFMEEMRQMG--VRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPG 269
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
L D+ R + EE+ + G+ PD +Y+++I+ G+ + +L +MR G
Sbjct: 270 YLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNG 329
Query: 497 MVPEPRTGILVNDMNIKLKER 517
+ P+ T +N+ KER
Sbjct: 330 VKPDVVT--YSTLINVLCKER 348
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 128/260 (49%), Gaps = 11/260 (4%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L RAR+ VE ++ +PD+V TY +L+N +A A + ++ + + + G D+
Sbjct: 280 LDRARKSVEELRQSGVVPDVV---TYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVT 336
Query: 226 FQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ LC+ + + A E E ++ T N +++G C G + E R ++ ++
Sbjct: 337 YSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMML 396
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
KS+C PD VTY+ +N L+K G L +A++LF+ + PD + +I +LC ++
Sbjct: 397 KSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLE 456
Query: 345 EALEVLREMKNRGCLPNVT-TYNSLIKHLCKIKRMETVYEYLDEMEQ------KNGSCLP 397
EA + M+ N+ L+ LC KR ++ ++ + K+G
Sbjct: 457 EACGMYHGMEVTVAGDNICRALAGLVAALCDAKRTDSARRIVEVARERGHRVTKSGDTDL 516
Query: 398 NEITFNYLLKSLKKPEEVPW 417
+I ++LL+S ++ + W
Sbjct: 517 AKIVEDHLLESKEEHADAEW 536
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 6/227 (2%)
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
AK + ++++ + DS + L ++ K +RLF + +G T ++D
Sbjct: 3 AKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
LC +ALE++RE+ P V YN +I LC+ R+ Y+ L++M ++ S
Sbjct: 63 GLCGAGMANQALELVRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEE--SI 119
Query: 396 LPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
+PN T+ LL L + + V + M+RNGCK + TY +++ D+
Sbjct: 120 VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALR 179
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
E + D + T ++ GL RL+DAL + EMR G+ P
Sbjct: 180 VMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRP 226
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 170/362 (46%), Gaps = 22/362 (6%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV-E 205
+P ++ + A++ RA RF + + VF M P LV TY ++L+ Y+ + +
Sbjct: 182 APDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALV---TYNVVLHVYSKMSVPWK 238
Query: 206 EAIGVFDRRKEFG-ELDDLSAFQNLLLWLCRYKHV--EVAETFFESEKNEFGYDIKTMNI 262
E + + D KE G ELD + N L+ CR + + E A+ F E + F D T N
Sbjct: 239 EVVVLVDSMKEDGIELDRYT--YNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNS 296
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+L+ + EA K + + C P VTY + ++A K G L AL L Q M +G
Sbjct: 297 LLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRG 356
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK-HLCKIKRMETV 381
KPDVVT +I L +I AL EM GC PN+ TYN+LIK H + K E +
Sbjct: 357 MKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMM 416
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVIL 438
+ D ++ +P+ +T+N LL + EV V + M++ G DTY ++
Sbjct: 417 IVFDD---LRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLI 473
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
Y D+ ++ M + G+ PD +Y ++ L GR A F EM +
Sbjct: 474 SSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCK 533
Query: 499 PE 500
P+
Sbjct: 534 PD 535
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 194/462 (41%), Gaps = 91/462 (19%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
T + +++ R EAA F + + + P FN++LDV G+ARR E I V
Sbjct: 258 TYNTLISCCRRRGLYREAAQMFDEM--KAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLK 315
Query: 181 EM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
+M P +V TY L++ Y ++EEA+ + + G D+ + L+ L
Sbjct: 316 KMENAGCTPSVV---TYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLD 372
Query: 235 RYKHVEVA-ETFFESEKN---------------------------------EFGY--DIK 258
R ++ A T+ E +N GY D+
Sbjct: 373 RIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVV 432
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N +L + G E +K++ K+ P+ TY + +++ ++ G A+ +++ M
Sbjct: 433 TWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRM 492
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC---KI 375
E G PD+ T N ++ AL R +A ++ EM++R C P+ +Y+SL+ K+
Sbjct: 493 IEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKL 552
Query: 376 KRMETVYE--YLDEMEQKN-------------GSCLPNEITFNYLL-------------- 406
+M+ + E Y +E N S E F L
Sbjct: 553 DKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAM 612
Query: 407 -------KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW-DCEDKVRHTWEEME 458
K +KK EEV L M+ N S TYN ++ +Y DCE K E++
Sbjct: 613 VSIYGKNKMVKKVEEV---LTLMKENSINHSAATYNSLMHMYSRLGDCE-KCEAILTEIK 668
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
GM PD+ SY +I+ KG++++A F EM+ G+ P+
Sbjct: 669 SSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPD 710
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 154/356 (43%), Gaps = 17/356 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
R Y P +N +L V G+ E+ VF EM + TY L++ Y+ +
Sbjct: 423 RSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 482
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNII 263
++A+ ++ R E G D+S + +L L R + V+ + F E E + D + + +
Sbjct: 483 DQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSL 542
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L+ + + + K +DI + EP + T V K L + FQ + +
Sbjct: 543 LHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRC 602
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
D+ N ++ K + + EVL MK + TYNSL+ ++ E
Sbjct: 603 SLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEA 662
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
L E+ K+ P+ ++N ++ + + +E + M+ +G K TYN+ +K
Sbjct: 663 ILTEI--KSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKS 720
Query: 441 YVN----WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
YV + D VR+ + +G P++R+Y ++ G GR+ +A S+ +
Sbjct: 721 YVANLMFEEAIDLVRY----LVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNL 772
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 167/383 (43%), Gaps = 28/383 (7%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+AA + + R G SP +NA++ + G +F E++ VFD++ PD+V T
Sbjct: 378 DAALATYSEMVRNG-CSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVV---T 433
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
+ LL + + E GVF K+ G + + + +L+ R + A ++
Sbjct: 434 WNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMI 493
Query: 251 NEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
Y DI T N +L+ G +A++ + ++ C+PD ++Y++ ++A KL
Sbjct: 494 EAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLD 553
Query: 310 TALRLFQAMWEKGRKPD------VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
L + ++ + +P +V N +++L E + +E++ R C ++
Sbjct: 554 KMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLS------ETEKAFQELRRRRCSLDIN 607
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL---KSLKKPEEVPWVLE 420
N+++ K K ++ V E L M K S + T+N L+ L E+ +L
Sbjct: 608 VLNAMVSIYGKNKMVKKVEEVLTLM--KENSINHSAATYNSLMHMYSRLGDCEKCEAILT 665
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
++ +G + +YN ++ Y + + EM+ G+ PD +Y + I
Sbjct: 666 EIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANL 725
Query: 481 RLEDALSYFHEMRLKGMVPEPRT 503
E+A+ + +G P RT
Sbjct: 726 MFEEAIDLVRYLVAQGCKPNERT 748
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 183/434 (42%), Gaps = 52/434 (11%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFD--------WEAAYTFFKWVSREGDYSPGSNVF 159
E+ KAL+ E TL D L+ + E AY + + R+ P +N F
Sbjct: 297 EVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM-RDHGLLPSTNEF 355
Query: 160 NAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF 217
N ++ L + + + + +F EM D + + TY IL++ + EA+ ++++ E
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNET 415
Query: 218 GELDDLSAFQNLLLWLCR-------------------YKHVEVAETFFESEKNEFGYDIK 258
G + + +LLL C +V T + N+ +D
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKA 475
Query: 259 -----------------TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
T N ++NG CV+G V E K P ++TY + +N
Sbjct: 476 YALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIING 535
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K G +G+A ++Q M KG P++VT ID C AL++L +++ +G P+
Sbjct: 536 FIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPD 595
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL---KSLKKPEEVPWV 418
+ YNSLI C+ M + L M K+G LPN +N + K+LK EE
Sbjct: 596 IAAYNSLIYGFCQEGNMSHALQVLVLM-LKDG-LLPNISVYNSFITGYKNLKMMEEALRF 653
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
E+M + G + T TY ++ + + EM KG PD ++T + HGL
Sbjct: 654 YEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCR 713
Query: 479 KGRLEDALSYFHEM 492
G ++DA EM
Sbjct: 714 NGDIDDARKLLDEM 727
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 167/379 (44%), Gaps = 48/379 (12%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI-----LLNRYAAAH 202
++ + P FN+++DVL + R E + + DE+ L K + L++ Y
Sbjct: 239 QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDEL--LATGKKMSVVLATTLMHGYCLQR 296
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLW------------LCRYKHVEVAETFFESEK 250
V +A+ +F+ G + + L+ LCR ++ +
Sbjct: 297 EVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCR----QMRDHGLLPST 352
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE------PDSVTYATFVNALTK 304
NEF IK + LN + WKD + E PD+ TY ++ L +
Sbjct: 353 NEFNMVIKGL---LN-----------DKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQ 398
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
+ K+ AL L++ M E G KP +VT + ++ C + EA+++ EM +G PNV T
Sbjct: 399 RRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVT 458
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLER 421
Y +L+K + Y L EM+Q SC N+ T+N L+ L + EV +L+R
Sbjct: 459 YTTLMKGHINKAAFDKAYALLAEMKQNGVSC--NDYTYNTLINGLCVVGRVCEVGEMLKR 516
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
E G + TYN I+ ++ +++M KG+ P+ +YT I G
Sbjct: 517 FETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSC 576
Query: 482 LEDALSYFHEMRLKGMVPE 500
+ AL +++R KG+ P+
Sbjct: 577 CDLALKMLNDVRCKGLRPD 595
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 128/267 (47%), Gaps = 14/267 (5%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P + +N+I++ +A V+ +M P++V TY ++ Y +
Sbjct: 522 FVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIV---TYTSFIDGYCKTSCCD 578
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
A+ + + + G D++A+ +L+ C+ ++ A + K+ +I N +
Sbjct: 579 LALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFI 638
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G+ L + EA RF++ +IK + D+ TY T ++ +K G + AL+L+ M KG
Sbjct: 639 TGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNI 698
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD +T + LC I +A ++L EM PNV YN LI + +++ +
Sbjct: 699 PDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRL 758
Query: 385 LDEMEQKNGSCLPNEITFNYL--LKSL 409
DEM ++ +P++ T++ L +KSL
Sbjct: 759 HDEMLERK--IMPDDTTYDILVGMKSL 783
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 118/296 (39%), Gaps = 41/296 (13%)
Query: 240 EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
+ F E +E D + ++ + C L + A + + + P T+ + V
Sbjct: 195 DAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVV 254
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL--------- 350
+ L K G++ AL + + G+K VV ++ C ++ + +AL++
Sbjct: 255 DVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLV 314
Query: 351 --------------------------REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
R+M++ G LP+ +N +IK L K +
Sbjct: 315 PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL 374
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
EM S +P+ T+N L+ L +K E + E+M G K TY+ +L Y
Sbjct: 375 FKEMAD---SGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
C D+ + EM KG P+ +YT ++ G +K + A + EM+ G+
Sbjct: 432 CVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 156/360 (43%), Gaps = 24/360 (6%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
+F+ ++ + + + +++FDEMP +++ + + A+ V +
Sbjct: 179 MFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM 238
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL-----NGWCV 269
++ G + F +++ L + +E A K+E K M+++L +G+C+
Sbjct: 239 QDAGFVPWDFTFNSVVDVLVKGGRMEEALHI----KDELLATGKKMSVVLATTLMHGYCL 294
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
V +A +++ ++ P VTY + T++G A L + M + G P
Sbjct: 295 QREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNE 354
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC---KIKRMETVYEYLD 386
N +I L K +A+ + +EM + G +P+ TYN LI LC KI+ ++E ++
Sbjct: 355 FNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMN 413
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
E K P +T++ LL +E + M G + TY ++K ++N
Sbjct: 414 ETGVK-----PYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
DK EM++ G+ + +Y +I+GL GR+ + +G VP T
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMT 528
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 38/253 (15%)
Query: 284 IKSKCEP-DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
++ K P D+ + + A K+G A+RLF M +PD C+ I +LC +
Sbjct: 168 MRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK----------- 391
AL VLR+M++ G +P T+NS++ L K RME DE+
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287
Query: 392 --NGSCL--------------------PNEITFNYLLKSLKK---PEEVPWVLERMERNG 426
+G CL P ++T+ L++ + PE+ + +M +G
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHG 347
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
ST+ +N+++K +N ++EM G+ PD +Y ++IH L + ++ +AL
Sbjct: 348 LLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREAL 406
Query: 487 SYFHEMRLKGMVP 499
+ + +M G+ P
Sbjct: 407 NLWEKMNETGVKP 419
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRI-PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M KG D + ++ A CFK+ + +A+ + EM P+ + I LCK++
Sbjct: 168 MRGKGHPLDAWMFDVVMRA-CFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT 433
L +M+ + +P + TFN ++ L K EE + + + G KMS
Sbjct: 227 DANRALLVLRKMQ--DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVL 284
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
++ Y K +EE + G+ P +YTV+I G ++G E A +MR
Sbjct: 285 ATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMR 344
Query: 494 LKGMVPEPRTGILVNDMNIKLK 515
G++P N+ N+ +K
Sbjct: 345 DHGLLPS------TNEFNMVIK 360
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 166/358 (46%), Gaps = 11/358 (3%)
Query: 148 REGDYSPGSNVF--NAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAH 202
R GDY + N +L L + R + V+ EM VN T+ +++N
Sbjct: 184 RAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVG 243
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
++A V + K +G + + ++ C+ + A+ E + T N
Sbjct: 244 KFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFN 303
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I+++G+C NV AK+ ++++ + +P+ VTY + +N L GKL AL L M
Sbjct: 304 ILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM 363
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G KP+VVT N +I+ C KK + EA E+L ++ RG PNV T+N+LI K RM+
Sbjct: 364 GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
+ L M G C PN T+N L+ + +E + + ME NG K TYN+++
Sbjct: 424 F-LLRSMMLDTGVC-PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
K +EM + G+ P +Y +I G + +G AL+ M KG
Sbjct: 482 DALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKG 539
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 168/354 (47%), Gaps = 17/354 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+SP +N I+D +A + + + EM P NE T+ IL++ + V
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHP---NEITFNILIDGFCRDENVT 316
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNII 263
A VF+ + G ++ + +L+ LC ++ A + + + G ++ T N +
Sbjct: 317 AAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEA-LGLQDKMSGMGLKPNVVTYNAL 375
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+NG+C + EA+ DI K P+ +T+ T ++A K G++ A L M + G
Sbjct: 376 INGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P+V T NC+I C + + EA ++ +EM+ G ++ TYN L+ LCK
Sbjct: 436 CPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVR 495
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKL 440
LDEM + + P+ +T+N L+ + L ME+ G + + TYNV++K
Sbjct: 496 LLDEMFEVGLN--PSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKG 553
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+ N ++ EM +KG+ P++ +Y ++ + +KG + D + + + +
Sbjct: 554 FCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLYNVSI 607
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 172/421 (40%), Gaps = 61/421 (14%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP------------------ 183
+FKW +E F +L +L A+ + ++ + D
Sbjct: 93 YFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLG 152
Query: 184 --DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG-ELDDLS---------------- 224
N +L+ Y ++ A+ FDR ++G L LS
Sbjct: 153 SWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGV 212
Query: 225 ------------------AFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILN 265
F ++ LC+ + A E K F + T N I++
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C G +++A K+++ + P+ +T+ ++ + + A ++F+ M +G +P
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+VVT N +I+ LC ++ EAL + +M G PNV TYN+LI CK K ++ E L
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
D++ ++ PN ITFN L+ + K ++ + M G + TYN ++ +
Sbjct: 393 DDIGKR--GLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFC 450
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ R +EME G+ D +Y +++ L KG A+ EM G+ P
Sbjct: 451 REGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHL 510
Query: 503 T 503
T
Sbjct: 511 T 511
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 137/284 (48%), Gaps = 9/284 (3%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGIL 194
AA F+ + R+G P +N++++ L + E + + D+M + N TY L
Sbjct: 317 AAKKVFEEMQRQG-LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNAL 375
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG 254
+N + M++EA + D + G ++ F L+ + ++ A S + G
Sbjct: 376 INGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA-FLLRSMMLDTG 434
Query: 255 Y--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
++ T N ++ G+C GNV EA++ K++ + + D VTY V+AL KKG+ A+
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
RL M+E G P +T N +ID + AL V M+ +G N+ TYN LIK
Sbjct: 495 RLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGF 554
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP 416
C ++E L+EM +K +PN T++ L + + +P
Sbjct: 555 CNKGKLEEANRLLNEMLEK--GLIPNRTTYDILRDEMMEKGFIP 596
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 167/410 (40%), Gaps = 52/410 (12%)
Query: 136 WEAAYTFFKWVSREG------------------------------DYSPGSNV----FNA 161
WE A +W S EG PGS + +
Sbjct: 126 WEWALALLRWASDEGAADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTT 185
Query: 162 ILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYA-AAHMVEEAIGVFDRR 214
+L L RA R+ +Q+F E+ P +V TY ++L+ Y + + +
Sbjct: 186 VLHALSRAGRYERALQLFAELRRQGVVPTIV---TYNVVLDVYGRMGRSWPRIVALLEEM 242
Query: 215 KEFG-ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD-IKTMNIILNGWCVLGN 272
+ G E DD +A ++ R ++ A FFE K + T N +L + GN
Sbjct: 243 RAAGVEPDDFTA-STVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGN 301
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
EA R K++ S C+PD+VTY + G A + M KG P+ T N
Sbjct: 302 YTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 361
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
++ A R+ EAL + MK G +PNV TYN + L K R + E L+EM +
Sbjct: 362 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 421
Query: 393 GSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
C PN +T+N +L K + V VL M+ G ++S DTYN ++ Y
Sbjct: 422 --CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTY 479
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++EM G P +Y +++ L +G A S +M G P
Sbjct: 480 AFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKP 529
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 6/224 (2%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI-PEALEV 349
D Y T ++AL++ G+ AL+LF + +G P +VT N ++D R P + +
Sbjct: 179 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVAL 238
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
L EM+ G P+ T +++I + ++ + ++++ + +P +T+N LL+
Sbjct: 239 LEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGH--VPCVVTYNALLQVF 296
Query: 410 KKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K E VL+ ME +GC+ TYN + Y ++ + M KG+ P+
Sbjct: 297 GKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNT 356
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDM 510
+Y ++ + GR+++AL+ F M+ G VP T L+ M
Sbjct: 357 FTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGM 400
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 163/394 (41%), Gaps = 56/394 (14%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + +N + RA F E + D M L N TY ++ YA V+EA+ +
Sbjct: 319 PDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALAL 378
Query: 211 FDRRKE-------------FGELDDLSAFQ---------------------NLLLWLCRY 236
FDR K+ FG L S F N +L +C
Sbjct: 379 FDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGK 438
Query: 237 KHVEVAETFFESEKNEFGYDIK--TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ +E T + G ++ T N +++ + G+ A + + ++I S P T
Sbjct: 439 RGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTT 498
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL--EVLRE 352
Y +N L+++G TA + M + G KP+ + + ++ C+ K A + +E
Sbjct: 499 YNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQ--CYAKGGNAAGIESIEKE 556
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
+ P+ +L+ K +R+E V + E++ + P+ + FN +L K
Sbjct: 557 VYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYK--PDLVIFNSMLAMYAKN 614
Query: 413 ---EEVPWVLERMERNGCKMSTDTYNVILKLYV----NWDCEDKVRHTWEEMEKKGMGPD 465
+ + + ++++G TYN ++ +Y +W+ E ++ +++ + PD
Sbjct: 615 GLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILK----QLKSSQVKPD 670
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
SY +I+G +G +++A EM GM P
Sbjct: 671 VVSYNTVINGFCKQGLIKEAQRILSEMIADGMAP 704
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 12/279 (4%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
T + ++NV++R + DW A + + + G + P ++ +L + + +
Sbjct: 498 TYNALLNVLSR-QGDWSTAQSIVSKMLKNG-FKPNDQSYSLLLQCYAKGGNAAGIESIEK 555
Query: 181 EM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
E+ P V +T I + VE+A F K G DL F ++L
Sbjct: 556 EVYVGTIFPSWVILRTLVIANFKCRRLEGVEKA---FQEVKAQGYKPDLVIFNSMLAMYA 612
Query: 235 RYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ A F+S K D+ T N +++ + +EA++ K + S+ +PD V
Sbjct: 613 KNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVV 672
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
+Y T +N K+G + A R+ M G P VVT + ++ + EA EV+ M
Sbjct: 673 SYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 732
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+ P TY ++ CK KR + E+L E+ +
Sbjct: 733 IHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTD 771
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 133/309 (43%), Gaps = 21/309 (6%)
Query: 112 ALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR-EGDYSPGSNVFNAILDVLGRAR 170
+ C + L+ D +I+ Y Y F + ++P +NA+L+VL R
Sbjct: 451 GMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQG 510
Query: 171 RFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF--GEL-D 221
+ + +M P N+++Y +LL YA A G+ KE G +
Sbjct: 511 DWSTAQSIVSKMLKNGFKP---NDQSYSLLLQCYAKGG---NAAGIESIEKEVYVGTIFP 564
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRF 279
+ L++ + + +E E F+ K + GY D+ N +L + G +A
Sbjct: 565 SWVILRTLVIANFKCRRLEGVEKAFQEVKAQ-GYKPDLVIFNSMLAMYAKNGLYSKATEM 623
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
+ I +S PD +TY + ++ K + A ++ + + KPDVV+ N +I+ C
Sbjct: 624 FDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCK 683
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ I EA +L EM G P V TY++L+ ++ E ++ M N P E
Sbjct: 684 QGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHN--LKPME 741
Query: 400 ITFNYLLKS 408
+T+ ++ S
Sbjct: 742 LTYRRVVDS 750
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 153/396 (38%), Gaps = 45/396 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV------ 186
A F + + G Y P N +N I +LG+ RF ++++ +EM P+ V
Sbjct: 375 ALALFDRMKKNG-YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML 433
Query: 187 --------------------------NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
+ TY L++ Y A ++D G
Sbjct: 434 AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFT 493
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
L+ + LL L R A++ KN F + ++ +++L + GN +
Sbjct: 494 PCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESI 553
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K++ P V T V A K +L + FQ + +G KPD+V N ++
Sbjct: 554 EKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAK 613
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+A E+ +K G P++ TYNSL+ K + L ++ K+ P+
Sbjct: 614 NGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQL--KSSQVKPDV 671
Query: 400 ITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
+++N ++ K +E +L M +G TY+ ++ Y + + ++ R
Sbjct: 672 VSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNY 731
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
M + P + +Y ++ R ++A + E+
Sbjct: 732 MIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI 767
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 191/423 (45%), Gaps = 50/423 (11%)
Query: 118 LTLTDDLIVNVINRYR---FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE 174
++ ++DL +NVIN YR +A F++ RE P ++N +LD + RF
Sbjct: 110 ISCSEDLFINVINTYRRVGLAEQALKMFYRI--REFGCQPTVKIYNHLLDAMLSENRFQM 167
Query: 175 LIQVFDEMP---DLVNEKTYGILLNRYAAAHMVEEA-------------------IGVFD 212
+ ++ M N TY ILL + V+ A V
Sbjct: 168 IEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVIS 227
Query: 213 RRKEFGELD-----------DLSAFQNLLLWLCR-YKHVEVAETFFESEKNEFGYDIKTM 260
+ G+++ ++S + L+ CR YK EV + + ++ T
Sbjct: 228 SMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITY 287
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+ +++ +GNV A W + C P+ T+ + + +G++ AL ++ M E
Sbjct: 288 STVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAE 347
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G +P+VV N +I LC ++ EA+ V +M+ GC PNV+TY +LI K +
Sbjct: 348 EGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVG 407
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE--EVPW-VLERMERNGCKMSTDTYNVI 437
E ++M NG C+PN + + ++ L + W ++E+M + C +T T+N
Sbjct: 408 ASEIWNKM-MTNG-CIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTF 465
Query: 438 LKLYVNWDCEDKVR---HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+K C +V + + +ME+ G P+ ++Y ++ GL + R+++AL EM
Sbjct: 466 IK---GLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEE 522
Query: 495 KGM 497
KGM
Sbjct: 523 KGM 525
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 149/324 (45%), Gaps = 12/324 (3%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N Y L+N + + V+E + + E G ++ + ++ L +VE+A +
Sbjct: 248 NVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVW 307
Query: 247 ESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
++ T ++ G+ + G V EA W + + EP+ V Y T ++ L
Sbjct: 308 AKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSH 367
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK+G A+ + M G P+V T +ID + A E+ +M GC+PNV Y
Sbjct: 368 GKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVY 427
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RM 422
S++ LC+ + +++M N C PN +TFN +K L V + +M
Sbjct: 428 TSMVNVLCRSSMFSQAWSLIEKMSTDN--CPPNTVTFNTFIKGLCCSGRVECAINLFCQM 485
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDK 479
E+ GC + TYN +L + E++++ E EME+KGM + +Y + G +
Sbjct: 486 EQYGCSPNIKTYNEVLDGLLK---ENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNV 542
Query: 480 GRLEDALSYFHEMRLKGMVPEPRT 503
G+ E+AL +M + G+ P+ T
Sbjct: 543 GKFEEALKLLGKMLVGGVKPDAIT 566
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 152/319 (47%), Gaps = 13/319 (4%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETF 245
N T+ L+ Y V EA+ +++R E G ++ A+ L+ LC + K E
Sbjct: 318 NVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVS 377
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ E+N ++ T +++G+ G++ A W ++ + C P+ V Y + VN L +
Sbjct: 378 SKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRS 437
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
A L + M P+ VT N I LC R+ A+ + +M+ GC PN+ TY
Sbjct: 438 SMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTY 497
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERM 422
N ++ L K R++ E + EME+K N +T+N + ++ K EE +L +M
Sbjct: 498 NEVLDGLLKENRIKEALELVTEMEEKGMEL--NLVTYNTIFGGFCNVGKFEEALKLLGKM 555
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG----PDQRSYTVMIHGLYD 478
G K TYN + Y + KV+ + ++K G P+ +YT ++ G+ +
Sbjct: 556 LVGGVKPDAITYNTLTYAYC---MQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICN 612
Query: 479 KGRLEDALSYFHEMRLKGM 497
+ +E+A+ Y +M +G+
Sbjct: 613 QIGVEEAVLYLDKMLNEGI 631
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 165/386 (42%), Gaps = 50/386 (12%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL----V 186
R D A +F+ ++ + + +++ LGR V+ +Q + L
Sbjct: 54 RTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECD-VDGVQYLLQQMKLEGISC 112
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
+E + ++N Y + E+A+ +F R +EFG + + +LL + ++ E +
Sbjct: 113 SEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIY 172
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ K + EP+ TY + AL K
Sbjct: 173 SNMK----------------------------------RDGKEPNVYTYNILLKALCKNN 198
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
++ A +L M KG +PDVV+ +I ++ ++ EA RE+ R PNV+ YN
Sbjct: 199 RVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA----RELSIR-FQPNVSVYN 253
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RME 423
+LI C+ +++ V+ L +M +K PN IT++ ++ SL V L +M
Sbjct: 254 ALINGFCREYKVKEVFLLLGQMVEKGID--PNVITYSTVISSLSGIGNVELALAVWAKMF 311
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
GC + T+ ++K Y + + W M ++G P+ +Y +IHGL G++
Sbjct: 312 VRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMG 371
Query: 484 DALSYFHEMRLKGMVPEPRT-GILVN 508
+A+S +M G P T G L++
Sbjct: 372 EAVSVSSKMERNGCSPNVSTYGALID 397
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 5/224 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P V+ ++++VL R+ F + + ++M N T+ + + VE AI +
Sbjct: 422 PNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINL 481
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCV 269
F + +++G ++ + +L L + + E E E E+ ++ T N I G+C
Sbjct: 482 FCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCN 541
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR-KPDVV 328
+G EA + ++ +PD++TY T A +GK+ TA++L + G+ P+V
Sbjct: 542 VGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVA 601
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
++ +C + + EA+ L +M N G N T+N+L++ L
Sbjct: 602 AYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 172/390 (44%), Gaps = 49/390 (12%)
Query: 150 GDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEE 206
G Y+P ++N I+ L RA R ++ +V ++M + + N TY ILLN ++ +
Sbjct: 82 GVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKL 141
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILN 265
A VF K G + + L+ L R + E E E D+ T I+
Sbjct: 142 AREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVG 201
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK- 324
G C + +A +F +++ + P+ VTY+ V+ + G+L +R F+ EK RK
Sbjct: 202 GLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFE--EEKARKG 259
Query: 325 -------------------------------------PDVVTCNCIIDALCFKKRIPEAL 347
PDVVT + +I+ + +L
Sbjct: 260 GSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASL 319
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
E+L +M+ G P+V TY++LI LCK ++ + + L+ ME PN +T+N ++
Sbjct: 320 ELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSP--PNVVTYNSVMD 377
Query: 408 SL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
L K +EV V E M ++ C TY++I+ D +E ++ GP
Sbjct: 378 GLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGP 437
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
D +Y+++I L G+LE+A +H M +
Sbjct: 438 DAAAYSMVITSLCRAGKLEEACGMYHGMEV 467
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 156/350 (44%), Gaps = 7/350 (2%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFD 212
S F + L R +F E++++F + + E TY ++++ A M +A+ +
Sbjct: 19 SQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV- 77
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLG 271
R L + ++ LCR V A E E ++ T I+LNG C
Sbjct: 78 RELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSN 137
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
A+ ++++ ++ C+P+ +TY T + L++ G++ ALR+ DV+TC
Sbjct: 138 KTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCT 197
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
I+ LC R+ +AL+ + EM+ G PN TY++L+ + ++ V + +E + +
Sbjct: 198 TIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKAR 257
Query: 392 NGSCLPNEITFNYLLKSLKKP--EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
G L YL K + +E + ++G TY++++ + D
Sbjct: 258 KGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDA 317
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
E+M + G+ PD +Y+ +I+ L + + +DA M G P
Sbjct: 318 SLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPP 367
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 8/261 (3%)
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N I+ G C V +A + + +++ P+ TY +N L + K A +FQ M
Sbjct: 92 NGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKR 151
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G KP+ +T +I L I EAL V+ E ++ +V T +++ LCK R++
Sbjct: 152 NGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDD 211
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL----ERMERNGCKMSTDTYNV 436
++++EM Q PNE+T++ L+ ++ E+ V+ E R G + Y
Sbjct: 212 ALKFMEEMRQMG--VRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPG 269
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
L D+ R + EE+ + G+ PD +Y+++I+ G+ + +L +MR G
Sbjct: 270 YLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNG 329
Query: 497 MVPEPRTGILVNDMNIKLKER 517
+ P+ T +N+ KER
Sbjct: 330 VKPDVVT--YSTLINVLCKER 348
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 128/260 (49%), Gaps = 11/260 (4%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L RAR+ VE ++ +PD+V TY +L+N +A A + ++ + + + G D+
Sbjct: 280 LDRARKSVEELRQSGVVPDVV---TYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVT 336
Query: 226 FQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ LC+ + + A E E ++ T N +++G C G + E R ++ ++
Sbjct: 337 YSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMML 396
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
KS+C PD VTY+ +N L+K G L +A++LF+ + PD + +I +LC ++
Sbjct: 397 KSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLE 456
Query: 345 EALEVLREMKNRGCLPNVT-TYNSLIKHLCKIKRMETVYEYLDEMEQ------KNGSCLP 397
EA + M+ N+ L+ LC +R ++ ++ + K+G
Sbjct: 457 EACGMYHGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEVASERGHRMTKSGDTDL 516
Query: 398 NEITFNYLLKSLKKPEEVPW 417
+I ++LL+S ++ + W
Sbjct: 517 VKIVEDHLLESKEEHADAEW 536
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 6/227 (2%)
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
AK + ++++ + DS + L ++ K +RLF + +G T ++D
Sbjct: 3 AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
LC +ALE++RE+ P + YN +I LC+ R+ Y+ L++M ++ S
Sbjct: 63 GLCGAGMANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEE--SI 119
Query: 396 LPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
+PN T+ LL L + + V + M+RNGCK + TY +++ D+
Sbjct: 120 VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALR 179
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
E + D + T ++ GL RL+DAL + EMR G+ P
Sbjct: 180 VMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRP 226
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 159/351 (45%), Gaps = 39/351 (11%)
Query: 158 VFNAILDVLGRARRFVELIQVFDE---MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
V N++L+ L + R + +++F+E + KT+ IL+ E+A+ +
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGM 232
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGN 272
FG L D+ + L+ C+ ++ A F+ K+ G D+ T +++G+C G
Sbjct: 233 SGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGK 292
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+ EA D+++ P +VT+ V+ K G++ TA + M G PDVVT
Sbjct: 293 MQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTS 352
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+ID C ++ + + EM RG PN TY+ LI LCK R+ E L ++ K+
Sbjct: 353 LIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKD 412
Query: 393 GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
+P +N ++ K +V + VI+
Sbjct: 413 --IIPQPFMYNPVIDGFCKAGKVNEAI----------------VIV-------------- 440
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
EEMEKK PD+ ++T++I G KGR+ +A+S FH+M G P+ T
Sbjct: 441 --EEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 46/293 (15%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT-------- 310
T N++ C G A + ++ + P+S V++ +KGKL
Sbjct: 105 TYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQS 164
Query: 311 -------------------------ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
A++LF+ D T N +I LC + +
Sbjct: 165 YEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A+E+L M GCLP++ TYN+LIK CK ++ E D+++ +G C P+ +T+ +
Sbjct: 225 AVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSG-CSPDVVTYTSM 283
Query: 406 LKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK-- 460
+ K +E +L+ M R G + T+NV++ Y + HT EE+ K
Sbjct: 284 ISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYA----KAGEMHTAEEIRGKMI 339
Query: 461 --GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
G PD ++T +I G G++ + EM +GM P T IL+N +
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINAL 392
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 186/442 (42%), Gaps = 80/442 (18%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
AY K ++++G + P V+N ++D A + I++ D M + TY L+
Sbjct: 338 AYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 396
Query: 196 NRYA-------AAHMVEEAIGV---------------------FDRRKEF-GE--LDDLS 224
Y A +++E + + FD F GE L ++S
Sbjct: 397 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 456
Query: 225 A----FQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
L+ LC++ KH + E +F+ F D +T N +L+G C G + EA R
Sbjct: 457 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 516
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K+I+ C D V+Y T ++ K KL A M ++G KPD T + +I L
Sbjct: 517 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 576
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
++ EA++ + K G LP+V TY+ +I CK +R E E+ DEM KN PN
Sbjct: 577 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ--PNT 634
Query: 400 ITFNYLLKS--------------------------------------LKKPEEVPWVLER 421
+ +N+L+++ + + EE + E
Sbjct: 635 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 694
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M G + + Y ++ Y KV EM K + P++ +YTVMI G G
Sbjct: 695 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 754
Query: 482 LEDALSYFHEMRLKGMVPEPRT 503
+ +A +EMR KG+VP+ T
Sbjct: 755 VTEASRLLNEMREKGIVPDSIT 776
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 124/269 (46%), Gaps = 9/269 (3%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T NI+L V N ++ D++ PD + T +NA K GK+ A++LF M
Sbjct: 217 TCNILLTSL-VRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 275
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
E G P+VVT N +ID L R EA +M RG P + TY+ L+K L + KR+
Sbjct: 276 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 335
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYN 435
Y L EM +K PN I +N L+ S + + +E M G +++ TYN
Sbjct: 336 GDAYFVLKEMTKKGFP--PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 393
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++K Y D +EM G +Q S+T +I L + AL + EM L+
Sbjct: 394 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 453
Query: 496 GMVPEPRTGILVNDMNIKLKERGEQGKKV 524
M P G L+ + L + G+ K +
Sbjct: 454 NMSP---GGGLLTTLISGLCKHGKHSKAL 479
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 149/343 (43%), Gaps = 9/343 (2%)
Query: 151 DYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
+ SPG + ++ L G+ + +EL F +V+ +T LL+ A ++EA
Sbjct: 454 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 513
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNG 266
+ G + D ++ L+ C K ++ A F E K D T +I++ G
Sbjct: 514 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 573
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ V EA +FW D ++ PD TY+ ++ K + F M K +P+
Sbjct: 574 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 633
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V N +I A C R+ ALE+ +MK++G PN TY SLIK + I R+E +
Sbjct: 634 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 693
Query: 387 EMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM + PN + L+ L + +V +L M + TY V++ Y
Sbjct: 694 EMRMEGLE--PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 751
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ EM +KG+ PD +Y I+G +G + +A
Sbjct: 752 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 794
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 173/389 (44%), Gaps = 19/389 (4%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
++ A+ F + + G P ++ ++ L RA+R + V EM P+++
Sbjct: 300 YDEAFMFKEKMVERG-MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI--- 355
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
Y L++ + A + +AI + D G S + L+ C+ + AE + E
Sbjct: 356 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK-E 414
Query: 250 KNEFGYDIK--TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
G+++ + ++ C A RF +++ P T ++ L K GK
Sbjct: 415 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 474
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
AL L+ KG D T N ++ LC ++ EA + +E+ RGC+ + +YN+
Sbjct: 475 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 534
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL---LKSLKKPEEVPWVLERMER 424
LI C K+++ + +LDEM ++ P+ T++ L L ++ K EE + +R
Sbjct: 535 LISGCCGKKKLDEAFMFLDEMVKRGLK--PDNYTYSILICGLFNMNKVEEAIQFWDDCKR 592
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
NG TY+V++ + ++ + ++EM K + P+ Y +I GRL
Sbjct: 593 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 652
Query: 485 ALSYFHEMRLKGMVPEPRT-GILVNDMNI 512
AL +M+ KG+ P T L+ M+I
Sbjct: 653 ALELREDMKHKGISPNSATYTSLIKGMSI 681
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 157/370 (42%), Gaps = 52/370 (14%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTY--GILLN 196
A F ++ +G + P N +L L RA F + + FD + V+ Y +N
Sbjct: 199 ALDVFPVLANKGMF-PSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAIN 257
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD 256
+ VEEA+ +F + +E G VA +
Sbjct: 258 AFCKGGKVEEAVKLFSKMEEAG----------------------VAP------------N 283
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ T N +++G + G EA F + +++ EP +TY+ V LT+ ++G A + +
Sbjct: 284 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK 343
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M +KG P+V+ N +ID+ + +A+E+ M ++G +TYN+LIK CK
Sbjct: 344 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 403
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFN----YLLKSLKKPEEVPWVLERMERNGCKMSTD 432
+ + L EM + N+ +F L L + +V E + RN MS
Sbjct: 404 QADNAERLLKEMLSIGFNV--NQGSFTSVICLLCSHLMFDSALRFVGEMLLRN---MSPG 458
Query: 433 TYNVILKLYVNWDCE----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+L ++ C+ K W + KG D R+ ++HGL + G+L++A
Sbjct: 459 --GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 516
Query: 489 FHEMRLKGMV 498
E+ +G V
Sbjct: 517 QKEILGRGCV 526
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 11/240 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKT 190
+ A+ F + + G P + ++ ++ L + E IQ +D+ +PD+ T
Sbjct: 546 DEAFMFLDEMVKRG-LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY---T 601
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y ++++ A EE FD + + +L+ CR + +A E K
Sbjct: 602 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 661
Query: 251 NE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
++ + T ++ G ++ V EAK ++++ EP+ Y ++ K G++
Sbjct: 662 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 721
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
L + M K P+ +T +I + EA +L EM+ +G +P+ TY I
Sbjct: 722 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 781
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 146/345 (42%), Gaps = 6/345 (1%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
+NA++ RA + ++ +P N TY ++ A + +A+ V D G
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 189
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
+ +L CR A E D+ N++LN C G+V EA
Sbjct: 190 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 249
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+D+ CEPD V+Y + L + G L + M P++VT N +I L
Sbjct: 250 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 309
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C EVL +M GC P++ Y ++I +CK +E +E L+ M P
Sbjct: 310 CRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK--P 367
Query: 398 NEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N + +N LLK L EE +L M C + T+N+++ + D+V
Sbjct: 368 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELL 427
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
E+M + G PD +YT +I+G +G +++A+ M G P
Sbjct: 428 EQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 472
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 161/360 (44%), Gaps = 15/360 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P FN ++ L R F + +V +M PD+ + Y +++ +E A
Sbjct: 297 PNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI---RMYATIIDGICKEGHLEVA 353
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNG 266
+ +R +G ++ + LL LC + E E E + D T NI+++
Sbjct: 354 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 413
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C G V + +++ C PD +TY T +N K+G + A+ L ++M G KP+
Sbjct: 414 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 473
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
++ ++ LC +R +A +++ +M +GC N T+N+LI LCK +E E L
Sbjct: 474 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 533
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+M NG C P+ I+++ ++ L K +E +L M G +T Y+ I
Sbjct: 534 QM-LVNG-CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSR 591
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+KV ++ ++ + D Y +I L +G E A+ + M G VP T
Sbjct: 592 EGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNEST 651
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 115/277 (41%), Gaps = 45/277 (16%)
Query: 159 FNAILDVL---GRARRFVELIQVFDE---MPDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
FN ++D G R +EL++ E MPD++ TY ++N + +++EA+ +
Sbjct: 407 FNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVI---TYTTVINGFCKEGLIDEAVMLLK 463
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
G + ++ +L LC + V+ + + + + T N ++N C G
Sbjct: 464 SMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKG 523
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP------ 325
V +A K ++ + C PD ++Y+T ++ L K GK AL L M KG P
Sbjct: 524 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 583
Query: 326 -----------------------------DVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
D V N +I +LC + A+E L M +
Sbjct: 584 SIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 643
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
GC+PN +TY LI+ L ++ E L E+ K
Sbjct: 644 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGA 680
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 174/375 (46%), Gaps = 16/375 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY+ V + G Y P + FN ++ L + E + + D M PD+V TY
Sbjct: 142 AYSVLGKVMKLG-YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV---TYN 197
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKN 251
++N + A+ + + +E D+ + ++ LCR ++ A + F E E
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N ++ G C G + KD++ + P+ +T+ ++ K+GKL A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L++ M +G P+++T N ++D C + R+ EA +L M C P++ T+ SLIK
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCK 428
C +KR++ + + ++ + N +T++ L++ + ++ + + M +G
Sbjct: 378 YCMVKRVDDGMKVFRNISKR--GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TY ++L + +K +E+++K M YT +I G+ G++EDA +
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 489 FHEMRLKGMVPEPRT 503
F + KG+ P T
Sbjct: 496 FCSLPCKGVKPNVMT 510
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 43/300 (14%)
Query: 252 EFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ GY D T N ++ G + G V EA ++++ C+PD VTY + VN + + G
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL L + M E+ K DV T + IID+LC I A+ + +EM+ +G +V TYNSL+
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK------------------ 411
+ LCK + L +M + +PN ITFN LL K
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSR--EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 412 --PEEVPW------------------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
P + + +L+ M RN C T+ ++K Y D
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
+ + K+G+ + +Y++++ G G+++ A F EM G++P+ T GIL++ +
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 12/246 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N ++D R E + D M PD+V T+ L+ Y V++
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV---TFTSLIKGYCMVKRVDD 386
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
+ VF + G + + + L+ C+ +++AE F+ E G D+ T I+L
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ-EMVSHGVLPDVMTYGILL 445
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G C G + +A ++D+ KSK + V Y T + + K GK+ A LF ++ KG K
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+V+T +I LC K + EA +LR+M+ G PN TYN+LI+ + + +
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 385 LDEMEQ 390
++EM+
Sbjct: 566 IEEMKS 571
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 8/257 (3%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A ++++I+S+ P V ++ F +A+ + + L + + G ++ T N +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C + A VL ++ G P+ TT+N+LIK L ++ +D M + NG
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-NG- 188
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
C P+ +T+N ++ + + + L+ +ME K TY+ I+ C D
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
++EME KG+ +Y ++ GL G+ D +M + +VP T ++ D+
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 512 I---KLKERGEQGKKVI 525
+ KL+E E K++I
Sbjct: 309 VKEGKLQEANELYKEMI 325
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 128/299 (42%), Gaps = 41/299 (13%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNII 263
++AI +F L L F + R K + F + E N ++I T+NI+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N +C +C Y+ LG ++L G
Sbjct: 130 INCFC------------------RCCKTCFAYSV----------LGKVMKL-------GY 154
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+PD T N +I L + ++ EA+ ++ M GC P+V TYNS++ +C+ +
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
L +ME++N + T++ ++ SL + + + + ME G K S TYN +++
Sbjct: 215 LLRKMEERNVK--ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ ++M + + P+ ++ V++ +G+L++A + EM +G+ P
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 4/224 (1%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP F +++ +R + ++VF + + N TY IL+ + + ++ A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWC 268
+F G L D+ + LL LC +E A FE +K++ I I+ G C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G V +A + + +P+ +TY ++ L KKG L A L + M E G P+
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
T N +I A + + +++ EMK+ G + ++ +I L
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 184/403 (45%), Gaps = 47/403 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A + ++R G P + ++ ++ L E + +EM + + T+ ++
Sbjct: 194 ALALLRGMARHG-CVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVV 252
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
V EA + DR G + + + LL LCR + + A
Sbjct: 253 RGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE---L 309
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
++ N ++ G G + EA ++ + C+PD+ TY+ ++ L K G++G+A+RL
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 369
Query: 316 QAMWEKGRKPDVVT--------C---------------------------NCIIDALCFK 340
+ M +KG P+VVT C N +I ALC
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
R+ EA+ +++EM+++GC P++ +YN++I HLC ++ME + + ++ + N I
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG--VVANGI 487
Query: 401 TFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T+N ++ +L + ++ + + M +GC + +YN ++K D+ EEM
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+KG+ P+ SY ++I L + R+ DAL +M +G+ P+
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPD 590
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 162/397 (40%), Gaps = 41/397 (10%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTY--GIL 194
A + R P +N +L VL RA + + ++ M D V T+ G+
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEF 253
+EA+ + G + D +Q ++ LC V A T E
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA----------------- 296
D+ T + ++ G C LG V EA R ++ C P +TY
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301
Query: 297 --------------TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
T + +GKL A L++ M KG +PD T + ++ LC R
Sbjct: 302 MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGR 361
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
I A+ +LREM+ +G PNV TY ++ CK + L+EM K + N +
Sbjct: 362 IGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTL--NSQGY 419
Query: 403 NYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
N ++ +L K +E +++ M GC +YN I+ N + ++ H +E + +
Sbjct: 420 NGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLE 479
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+G+ + +Y +IH L GR +DA+ EM L G
Sbjct: 480 EGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 120/274 (43%), Gaps = 32/274 (11%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T + C LG EA + + + C PD+V Y T ++AL +G + A L M
Sbjct: 177 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
G DV T + ++ +C R+ EA ++ M +GC+P V TY L++ LC++++
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296
Query: 379 ETVYEYLDEMEQKN--------GSCL---------------------PNEITFNYLLKSL 409
+ L + + N G CL P+ T++ L+ L
Sbjct: 297 DEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356
Query: 410 KKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K + +L ME+ G + TY ++L + D R EEM KG+ +
Sbjct: 357 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ Y MI+ L GR+++A+ EMR +G P+
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPD 450
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 119/224 (53%), Gaps = 5/224 (2%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
+N + Y ++ ++EA+G+ + G D+ ++ ++ LC + +E AE
Sbjct: 414 LNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 473
Query: 246 FES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
FE+ E+ I T N I++ G +A R K++I C D V+Y + A+
Sbjct: 474 FENLLEEGVVANGI-TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 532
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K G + +L L + M EKG KP+ V+ N +I LC ++R+ +ALE+ ++M N+G P++
Sbjct: 533 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIV 592
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
TYN+LI LCK+ M L+++ +N P+ IT+N L+
Sbjct: 593 TYNTLINGLCKMGWMHAALNLLEKLHNEN--VHPDIITYNILIS 634
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+ + P + T+ AL + G+ AL L + M G PD V +I ALC + +
Sbjct: 168 RDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVT 227
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA +L EM GC +V T++ +++ +C + R+ +D M K C+P +T+ +
Sbjct: 228 EAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG--CMPGVMTYGF 285
Query: 405 LLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
LL+ L ++ +E +L R+ +++ +N ++ + + +E M KG
Sbjct: 286 LLQGLCRVRQADEARAMLGRVP----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKG 341
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
PD +Y++++HGL GR+ A+ EM KG P
Sbjct: 342 CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAP 379
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNVYEAKRF 279
D+ ++ L+ +C+ +V+ + E E E G + NI+++ C V +A
Sbjct: 520 DVVSYNGLIKAMCKDGNVDRSLVLLE-EMAEKGIKPNNVSYNILISELCKERRVRDALEL 578
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K ++ PD VTY T +N L K G + AL L + + + PD++T N +I C
Sbjct: 579 SKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638
Query: 340 KKRIPEALEVL 350
+ + +A +L
Sbjct: 639 VRLLDDAAMLL 649
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 169/365 (46%), Gaps = 10/365 (2%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTY 191
D AA +F + + G + G + A+++ L RA E +V EM D V+ TY
Sbjct: 370 DLAAARNWFDEMQKRGLAADGVT-YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEK 250
+L++ Y + EA V ++ + ++ + L LC+ V A E E
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+I T N ++NG C GN+ +A R D+ ++ +PD TY T + AL + +L
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L Q M +KG KP +VT N +++ C R+ +L M + PN TTYNSL+K
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGC 427
C K M++ E M + +PNE T+N L+K K +E + M G
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQE--VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+++ +YN +++L + R +E+M K + + Y I +++ LE L+
Sbjct: 667 RLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLA 726
Query: 488 YFHEM 492
E+
Sbjct: 727 LCDEL 731
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 155/352 (44%), Gaps = 12/352 (3%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N +L L A R + Q+FDEM PD+V TYGI+++ Y +E AI +
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEMASPPDVV---TYGIMVHGYCTLSELETAIKLLSEMA 312
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVY 274
G + A+ +++ LC V A E + D +++G+C G++
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
A+ ++ ++ K D VTY +N L + G+L A R+ Q M +KG D VT +I
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
D C ++ EA V +M + PNV TY +L LCK + E L EM K
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492
Query: 395 CLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
N T+N L+ L K E+ + M+ G K TY I+ D+
Sbjct: 493 L--NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+EM KG+ P +Y V+++G GR+E M K + P T
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTT 602
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 149/355 (41%), Gaps = 45/355 (12%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
R+ SP NA+L L E +Q+F E+P+ N +Y ILL A +++A
Sbjct: 218 RQYGISPSPESCNAVLCRLP----LDEAVQLFQELPE-KNTCSYNILLKALCTAGRIKDA 272
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILN 265
+FD E D+ + ++ C +E A SE G ++ + ++
Sbjct: 273 HQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLL-SEMAARGLELNPVAYTSVIA 328
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G V +A R +D++ D+ + T ++ +KG L A F M ++G
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D VT +I+ LC + EA VL+EM+++G + TY LI CK+ +M +
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
++M QK + PN +T+ L L K +V E +
Sbjct: 449 NKMVQKRVT--PNVVTYTALSDGLCKQGDVCAANELLH---------------------- 484
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
EM KG+ + +Y +I+GL G LE A+ +M G+ P+
Sbjct: 485 ----------EMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 130/304 (42%), Gaps = 43/304 (14%)
Query: 233 LCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LCR E + F E EKN Y NI+L C G + +A + + ++ PD
Sbjct: 233 LCRLPLDEAVQLFQELPEKNTCSY-----NILLKALCTAGRIKDAHQLFDEMASP---PD 284
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
VTY V+ +L TA++L M +G + + V +I LC + ++ +A+ V+
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVE 344
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+M G + + + +++ C+ + + DEM+++ + + +T+ L+ L +
Sbjct: 345 DMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA--DGVTYTALINGLCR 402
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
E L+ ER +EME KG+ D +YTV
Sbjct: 403 AGE----LKEAER----------------------------VLQEMEDKGLDVDAVTYTV 430
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLG 531
+I G G++ +A ++M K + P T ++D K + + + ++ S G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Query: 532 LKGN 535
L+ N
Sbjct: 491 LELN 494
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 173/396 (43%), Gaps = 50/396 (12%)
Query: 149 EGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVE 205
E + P NA+++ L G+ V LI E NE TYG +L +
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIIL 264
A+ + + +E D + ++ LC+ ++ A F E E F DI ++
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G+C G + + +D+IK K PD V ++ ++ K+GKL A L + M ++G
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV---------------------- 362
PD VT +ID C + ++ +A +L M ++GC PN+
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 363 -------------TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
TYN+LI+ C++ ++E E EM + P+ +++ LL L
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR--VRPDIVSYKILLDGL 467
Query: 410 ---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE---EMEKKGMG 463
+PE+ + E++E++ ++ YN+I+ N KV W+ + KG+
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN---ASKVDDAWDLFCSLPLKGVK 524
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
PD ++Y +MI GL KG L +A F +M G P
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 142/306 (46%), Gaps = 12/306 (3%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNII 263
++A+ +F L F L + R K + V + + E +++ T++I+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N C + A IIK EPD+VT++T +N L +G++ AL L M E G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
KP ++T N +++ LC ++ +A+ ++ M G PN TY ++K +CK + E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKL 440
L +ME++ + + ++ ++ L K + + ME G K Y +++
Sbjct: 234 LLRKMEERKIKL--DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 441 YV---NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ WD K+ +M K+ + PD +++ +I +G+L +A EM +G+
Sbjct: 292 FCYAGRWDDGAKL---LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 498 VPEPRT 503
P+ T
Sbjct: 349 SPDTVT 354
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 172/401 (42%), Gaps = 43/401 (10%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + E ++ EM PD V TY L++ + + +++
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV---TYTSLIDGFCKENQLDK 370
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A + D G ++ F L+ C+ ++ E F + D T N ++
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C LG + AK +++++ + PD V+Y ++ L G+ AL +F+ + + +
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ N II +C ++ +A ++ + +G P+V TYN +I LCK +
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+ME+ S PN T+N L+++ + ++E ++R C S D + L
Sbjct: 551 RKMEEDGHS--PNGCTYNILIRAHLGEGDATKSAKLIEEIKR--CGFSVDASTLRFAL-- 604
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG--LYDKGRLEDALSYFHEMRLKGMVPE 500
T M K G PD ++T ++ L + + DA + F M+ G P
Sbjct: 605 ---------STLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPN 655
Query: 501 PRT------GILVNDMNIKLK-------ERGEQGKKVIKLT 528
T G+L +M ++ ERG Q V K T
Sbjct: 656 VVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKST 696
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 146/375 (38%), Gaps = 74/375 (19%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
SP + + +++D + + + + D M N +T+ IL+N Y A+++++ +
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--------------------- 248
+F + G + D + L+ C +EVA+ F+
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 249 ---------------EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
EK++ DI NII++G C V +A + + +PD
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII-------DALCFKKRIPE- 345
TY + L KKG L A LF+ M E G P+ T N +I DA K I E
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Query: 346 --------------ALEVLREMKNRGCLPNVTTYNSLIKHLC-----KIKRMETVYEYLD 386
AL L M G P+V T+ +L++ C + T+++ +
Sbjct: 589 KRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMK 648
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
M K PN +T+N ++K L +VP VL++M GC+ + T + +
Sbjct: 649 AMGYK-----PNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCK 703
Query: 444 WDCEDKVRHTWEEME 458
D +ME
Sbjct: 704 QDLHGSAILLLRKME 718
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 117/283 (41%), Gaps = 30/283 (10%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGIL 194
A F + VSR P + +LD L G + +E+ + ++ ++ Y I+
Sbjct: 441 AKELFQEMVSRR--VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEF 253
++ A V++A +F G D+ + ++ LC+ + A+ F E++
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDI----------------------IKSKCEPD 291
+ T NI++ G+ ++ + ++I +K+ EPD
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPD 618
Query: 292 SVTYATFVN--ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
T+ T + L + + A LF+ M G KP+VVT N +I L I + V
Sbjct: 619 VFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGV 678
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
L +M RGC PN T ++ I LCK + L +ME N
Sbjct: 679 LDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDN 721
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 174/375 (46%), Gaps = 16/375 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY+ V + G Y P + FN ++ L + E + + D M PD+V TY
Sbjct: 142 AYSVLGKVMKLG-YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV---TYN 197
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKN 251
++N + A+ + + +E D+ + ++ LCR ++ A + F E E
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N ++ G C G + KD++ + P+ +T+ ++ K+GKL A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L++ M +G P+++T N ++D C + R+ EA +L M C P++ T+ SLIK
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCK 428
C +KR++ + + ++ + N +T++ L++ + ++ + + M +G
Sbjct: 378 YCMVKRVDDGMKVFRNISKR--GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TY ++L + +K +E+++K M YT +I G+ G++EDA +
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 489 FHEMRLKGMVPEPRT 503
F + KG+ P T
Sbjct: 496 FCSLPCKGVKPNVMT 510
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 43/300 (14%)
Query: 252 EFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ GY D T N ++ G + G V EA ++++ C+PD VTY + VN + + G
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL L + M E+ K DV T + IID+LC I A+ + +EM+ +G +V TYNSL+
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK------------------ 411
+ LCK + L +M + +PN ITFN LL K
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSR--EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 412 --PEEVPW------------------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
P + + +L+ M RN C T+ ++K Y D
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
+ + K+G+ + +Y++++ G G+++ A F EM G++P+ T GIL++ +
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 130/269 (48%), Gaps = 14/269 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N ++D R E + D M PD+V T+ L+ Y V++
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV---TFTSLIKGYCMVKRVDD 386
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
+ VF + G + + + L+ C+ +++AE F+ E G D+ T I+L
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ-EMVSHGVLPDVMTYGILL 445
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G C G + +A ++D+ KSK + V Y T + + K GK+ A LF ++ KG K
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+V+T +I LC K + EA +LR+M+ G PN TYN+LI+ + + +
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 385 LDEMEQKNGSCLPNEI--TFNYLLKSLKK 411
++EM+ S + I + LL ++K+
Sbjct: 566 IEEMKSCGFSADASSIKMVIDMLLSAMKR 594
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 8/257 (3%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A ++++I+S+ P V ++ F +A+ + + L + + G ++ T N +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C + A VL ++ G P+ TT+N+LIK L ++ +D M + NG
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-NG- 188
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
C P+ +T+N ++ + + + L+ +ME K TY+ I+ C D
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
++EME KG+ +Y ++ GL G+ D +M + +VP T ++ D+
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 512 I---KLKERGEQGKKVI 525
+ KL+E E K++I
Sbjct: 309 VKEGKLQEANELYKEMI 325
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 128/299 (42%), Gaps = 41/299 (13%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNII 263
++AI +F L L F + R K + F + E N ++I T+NI+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N +C +C Y+ LG ++L G
Sbjct: 130 INCFC------------------RCCKTCFAYSV----------LGKVMKL-------GY 154
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+PD T N +I L + ++ EA+ ++ M GC P+V TYNS++ +C+ +
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
L +ME++N + T++ ++ SL + + + + ME G K S TYN +++
Sbjct: 215 LLRKMEERNVK--ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ ++M + + P+ ++ V++ +G+L++A + EM +G+ P
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 5/235 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP F +++ +R + ++VF + + N TY IL+ + + ++ A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWC 268
+F G L D+ + LL LC +E A FE +K++ I I+ G C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G V +A + + +P+ +TY ++ L KKG L A L + M E G P+
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH-LCKIKRMETVY 382
T N +I A + + +++ EMK+ G + ++ +I L +KR+ Y
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRY 599
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 186/442 (42%), Gaps = 80/442 (18%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
AY K ++++G + P V+N ++D A + I++ D M + TY L+
Sbjct: 349 AYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 196 NRYA-------AAHMVEEAIGV---------------------FDRRKEF-GE--LDDLS 224
Y A +++E + + FD F GE L ++S
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 225 A----FQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
L+ LC++ KH + E +F+ F D +T N +L+G C G + EA R
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K+I+ C D V+Y T ++ K KL A M ++G KPD T + +I L
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
++ EA++ + K G LP+V TY+ +I CK +R E E+ DEM KN PN
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ--PNT 645
Query: 400 ITFNYLLKS--------------------------------------LKKPEEVPWVLER 421
+ +N+L+++ + + EE + E
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M G + + Y ++ Y KV EM K + P++ +YTVMI G G
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 482 LEDALSYFHEMRLKGMVPEPRT 503
+ +A +EMR KG+VP+ T
Sbjct: 766 VTEASRLLNEMREKGIVPDSIT 787
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 124/269 (46%), Gaps = 9/269 (3%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T NI+L V N ++ D++ PD + T +NA K GK+ A++LF M
Sbjct: 228 TCNILLTSL-VRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
E G P+VVT N +ID L R EA +M RG P + TY+ L+K L + KR+
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYN 435
Y L EM +K PN I +N L+ S + + +E M G +++ TYN
Sbjct: 347 GDAYFVLKEMTKKGFP--PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++K Y D +EM G +Q S+T +I L + AL + EM L+
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 496 GMVPEPRTGILVNDMNIKLKERGEQGKKV 524
M P G L+ + L + G+ K +
Sbjct: 465 NMSP---GGGLLTTLISGLCKHGKHSKAL 490
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 149/343 (43%), Gaps = 9/343 (2%)
Query: 151 DYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
+ SPG + ++ L G+ + +EL F +V+ +T LL+ A ++EA
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNG 266
+ G + D ++ L+ C K ++ A F E K D T +I++ G
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ V EA +FW D ++ PD TY+ ++ K + F M K +P+
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V N +I A C R+ ALE+ +MK++G PN TY SLIK + I R+E +
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Query: 387 EMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM + PN + L+ L + +V +L M + TY V++ Y
Sbjct: 705 EMRMEGLE--PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ EM +KG+ PD +Y I+G +G + +A
Sbjct: 763 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 173/389 (44%), Gaps = 19/389 (4%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
++ A+ F + + G P ++ ++ L RA+R + V EM P+++
Sbjct: 311 YDEAFMFKEKMVERG-MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI--- 366
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
Y L++ + A + +AI + D G S + L+ C+ + AE + E
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK-E 425
Query: 250 KNEFGYDIK--TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
G+++ + ++ C A RF +++ P T ++ L K GK
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
AL L+ KG D T N ++ LC ++ EA + +E+ RGC+ + +YN+
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL---LKSLKKPEEVPWVLERMER 424
LI C K+++ + +LDEM ++ P+ T++ L L ++ K EE + +R
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLK--PDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
NG TY+V++ + ++ + ++EM K + P+ Y +I GRL
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 485 ALSYFHEMRLKGMVPEPRT-GILVNDMNI 512
AL +M+ KG+ P T L+ M+I
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSI 692
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 157/370 (42%), Gaps = 52/370 (14%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTY--GILLN 196
A F ++ +G + P N +L L RA F + + FD + V+ Y +N
Sbjct: 210 ALDVFPVLANKGMF-PSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAIN 268
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD 256
+ VEEA+ +F + +E G VA +
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAG----------------------VAP------------N 294
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ T N +++G + G EA F + +++ EP +TY+ V LT+ ++G A + +
Sbjct: 295 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK 354
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M +KG P+V+ N +ID+ + +A+E+ M ++G +TYN+LIK CK
Sbjct: 355 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFN----YLLKSLKKPEEVPWVLERMERNGCKMSTD 432
+ + L EM + N+ +F L L + +V E + RN MS
Sbjct: 415 QADNAERLLKEMLSIGFNV--NQGSFTSVICLLCSHLMFDSALRFVGEMLLRN---MSPG 469
Query: 433 TYNVILKLYVNWDCE----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+L ++ C+ K W + KG D R+ ++HGL + G+L++A
Sbjct: 470 --GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 489 FHEMRLKGMV 498
E+ +G V
Sbjct: 528 QKEILGRGCV 537
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 11/240 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKT 190
+ A+ F + + G P + ++ ++ L + E IQ +D+ +PD+ T
Sbjct: 557 DEAFMFLDEMVKRG-LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY---T 612
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y ++++ A EE FD + + +L+ CR + +A E K
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 251 NE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
++ + T ++ G ++ V EAK ++++ EP+ Y ++ K G++
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
L + M K P+ +T +I + EA +L EM+ +G +P+ TY I
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 167/410 (40%), Gaps = 52/410 (12%)
Query: 136 WEAAYTFFKWVSREG------------------------------DYSPGSNV----FNA 161
WE A +W S EG PGS + +
Sbjct: 126 WEWALALLRWASDEGAADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTT 185
Query: 162 ILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYA-AAHMVEEAIGVFDRR 214
+L L RA R+ +Q+F E+ P +V TY ++L+ Y + + +
Sbjct: 186 VLHALSRAGRYERALQLFAELRRQGVVPTIV---TYNVVLDVYGRMGRSWPRIVALLEEM 242
Query: 215 KEFG-ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD-IKTMNIILNGWCVLGN 272
+ G E DD +A ++ R ++ A FFE K + T N +L + GN
Sbjct: 243 RAAGVEPDDFTA-STVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGN 301
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
EA R K++ S C+PD+VTY + G A + M KG P+ T N
Sbjct: 302 YTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 361
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
++ A R+ EAL + MK G +PNV TYN + L K R + E L+EM +
Sbjct: 362 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 421
Query: 393 GSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
C PN +T+N +L K + V VL M+ G ++S DTYN ++ Y
Sbjct: 422 --CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTY 479
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++EM G P +Y +++ L +G A S +M G P
Sbjct: 480 AFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKP 529
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 6/224 (2%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI-PEALEV 349
D Y T ++AL++ G+ AL+LF + +G P +VT N ++D R P + +
Sbjct: 179 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVAL 238
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
L EM+ G P+ T +++I + ++ + ++++ + +P +T+N LL+
Sbjct: 239 LEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGH--VPCVVTYNALLQVF 296
Query: 410 KKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K E VL+ ME +GC+ TYN + Y ++ + M KG+ P+
Sbjct: 297 GKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNT 356
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDM 510
+Y ++ + GR+++AL+ F M+ G VP T L+ M
Sbjct: 357 FTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGM 400
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 163/394 (41%), Gaps = 56/394 (14%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + +N + RA F E + D M L N TY ++ YA V+EA+ +
Sbjct: 319 PDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALAL 378
Query: 211 FDRRKE-------------FGELDDLSAFQ---------------------NLLLWLCRY 236
FDR K+ FG L S F N +L +C
Sbjct: 379 FDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGK 438
Query: 237 KHVEVAETFFESEKNEFGYDIK--TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ +E T + G ++ T N +++ + G+ A + + ++I S P T
Sbjct: 439 RGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTT 498
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL--EVLRE 352
Y +N L+++G TA + M + G KP+ + + ++ C+ K A + +E
Sbjct: 499 YNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQ--CYAKGGNAAGIESIEKE 556
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
+ P+ +L+ K +R+E V + E++ + P+ + FN +L K
Sbjct: 557 VYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYK--PDLVIFNSMLAMYAKN 614
Query: 413 ---EEVPWVLERMERNGCKMSTDTYNVILKLYV----NWDCEDKVRHTWEEMEKKGMGPD 465
+ + + ++++G TYN ++ +Y +W+ E ++ +++ + PD
Sbjct: 615 GLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILK----QLKSSQVKPD 670
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
SY +I+G +G +++A EM GM P
Sbjct: 671 VVSYNTVINGFCKQGLIKEAQRILSEMIADGMAP 704
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 12/279 (4%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
T + ++NV++R + DW A + + + G + P ++ +L + + +
Sbjct: 498 TYNALLNVLSR-QGDWSTAQSIVSKMLKNG-FKPNDQSYSLLLQCYAKGGNAAGIESIEK 555
Query: 181 EM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
E+ P V +T I + VE+A F K G DL F ++L
Sbjct: 556 EVYVGTIFPSWVILRTLVIANFKCRRLEGVEKA---FQEVKAQGYKPDLVIFNSMLAMYA 612
Query: 235 RYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ A F+S K D+ T N +++ + +EA++ K + S+ +PD V
Sbjct: 613 KNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVV 672
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
+Y T +N K+G + A R+ M G P VVT + ++ + EA EV+ M
Sbjct: 673 SYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 732
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+ P TY ++ CK KR + E+L E+ +
Sbjct: 733 IHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTD 771
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 133/309 (43%), Gaps = 21/309 (6%)
Query: 112 ALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR-EGDYSPGSNVFNAILDVLGRAR 170
+ C + L+ D +I+ Y Y F + ++P +NA+L+VL R
Sbjct: 451 GMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQG 510
Query: 171 RFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF--GEL-D 221
+ + +M P N+++Y +LL YA A G+ KE G +
Sbjct: 511 DWSTAQSIVSKMLKNGFKP---NDQSYSLLLQCYAKGG---NAAGIESIEKEVYVGTIFP 564
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRF 279
+ L++ + + +E E F+ K + GY D+ N +L + G +A
Sbjct: 565 SWVILRTLVIANFKCRRLEGVEKAFQEVKAQ-GYKPDLVIFNSMLAMYAKNGLYSKATEM 623
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
+ I +S PD +TY + ++ K + A ++ + + KPDVV+ N +I+ C
Sbjct: 624 FDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCK 683
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ I EA +L EM G P V TY++L+ ++ E ++ M N P E
Sbjct: 684 QGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHN--LKPME 741
Query: 400 ITFNYLLKS 408
+T+ ++ S
Sbjct: 742 LTYRRVVDS 750
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 153/396 (38%), Gaps = 45/396 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV------ 186
A F + + G Y P N +N I +LG+ RF ++++ +EM P+ V
Sbjct: 375 ALALFDRMKKNG-YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML 433
Query: 187 --------------------------NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
+ TY L++ Y A ++D G
Sbjct: 434 AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFT 493
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
L+ + LL L R A++ KN F + ++ +++L + GN +
Sbjct: 494 PCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESI 553
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K++ P V T V A K +L + FQ + +G KPD+V N ++
Sbjct: 554 EKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAK 613
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+A E+ +K G P++ TYNSL+ K + L ++ K+ P+
Sbjct: 614 NGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQL--KSSQVKPDV 671
Query: 400 ITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
+++N ++ K +E +L M +G TY+ ++ Y + + ++ R
Sbjct: 672 VSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNY 731
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
M + P + +Y ++ R ++A + E+
Sbjct: 732 MIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI 767
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 173/363 (47%), Gaps = 13/363 (3%)
Query: 153 SPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEK-TYGILLNRYAAAHMVEEAI 208
SP + +N ++ GR + +E+++ E + +K TY +++ + VE+A
Sbjct: 144 SPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDAT 203
Query: 209 GVFDRRKEFGELDDLSAFQNLLLW-LCRYKHVEVAETF-FESEKNEFGYDIKTMNIILNG 266
VFD G+++ + N L+ C ++EVA + E + T N+ ++
Sbjct: 204 KVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHT 263
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ G EA +++ + PD+ TY +N K+GK A+++F+ M KG +
Sbjct: 264 LFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRAT 323
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT +I AL K + E + + RG P++ YN+LI C M+ +E +
Sbjct: 324 VVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMG 383
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY-V 442
EME+K P+++T+N L++ L + +E ++E M + G + +YN ++ Y +
Sbjct: 384 EMEKKR--ITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSM 441
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
D +D V+ +EM KG P +Y MI GL G+ DA EM G+ P+
Sbjct: 442 KGDIKDAVK-VRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDS 500
Query: 503 TGI 505
T I
Sbjct: 501 TYI 503
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 39/232 (16%)
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
+ DI + + + T+ + L GK AL L + M P+ VT N +I C
Sbjct: 103 LFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFC 158
Query: 339 FKKRIPEALEVLREMKNRGCL-PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
+ R+ +E++REM+ RG + P+ TY ++I CK+ ++E + DEM + G P
Sbjct: 159 ARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTE-GKVEP 217
Query: 398 NEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
N + +N L+ C + E +R+ E M
Sbjct: 218 NAVMYNALIGGY-----------------CD--------------QGNLEVALRYRGE-M 245
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
+G+ +Y + +H L+ +GR +A + EM KG+ P+ T IL+N
Sbjct: 246 VDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILIN 297
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 177/368 (48%), Gaps = 16/368 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+NA++ + R E +++ +EM PD+ +Y IL+N + +E + +
Sbjct: 263 YNALIQGFCQKGRPDEALKLLEEMKDEGISPDIY---SYSILVNAFCTEGDIESGMNLIQ 319
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLG 271
+ + L ++L+ L V FF E + +D+ + + +++G+
Sbjct: 320 EMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGH 379
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
NV A ++ K+ PD + Y + + +KG L AL+ F M + G +PD++TCN
Sbjct: 380 NVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCN 439
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
I+D C + + EAL + +MK++ LPN TY+ +I LCK + +E +E L M +
Sbjct: 440 HIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKD 499
Query: 392 NGSCLPNEITFNYLL----KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
N P+ I + ++ K K P + + +M + GCK T V++ ++
Sbjct: 500 N--IFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKM 557
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
K + ++EM ++G+ D+ ++T +I G G ++ A S + +M+ + P +T +
Sbjct: 558 SKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCL 617
Query: 508 NDMNIKLK 515
D KLK
Sbjct: 618 VDGFCKLK 625
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 39/295 (13%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD++ T ++++Y + EEA+ ++ K+ L + + ++ WLC+Y+ VE A
Sbjct: 433 PDII---TCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKA 489
Query: 243 -ETFFESEKNEFGYDIKTMNIILNGWC-VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
E K+ + I++G+ N +A + ++ + K C+PD+VT V+
Sbjct: 490 WEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVD 549
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
+K+GK+ AL LF+ M E+G D IID C + A + ++MK P
Sbjct: 550 MFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTP 609
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE 420
NV TY L+ CK+KR++ +D+M K S P+ T+ L+ ++ E +
Sbjct: 610 NVKTYTCLVDGFCKLKRLDMATMLIDDM--KRNSVTPDVKTYTALIAGYQRIENI----- 662
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
D+ ++EM+KKG PD +Y + G
Sbjct: 663 ---------------------------DRAYEVFDEMKKKGTLPDHIAYLTLGLG 690
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 139/316 (43%), Gaps = 7/316 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFES 248
+Y L++ + H V+ A + ++ G + D + +L+ CR + E + F+
Sbjct: 367 SYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTM 426
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
++ DI T N I++ +C G EA + + P+S TY+ +N L K +
Sbjct: 427 LQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAV 486
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP-EALEVLREMKNRGCLPNVTTYNS 367
A + M++ P V+ I+D + + P +A ++ R+M GC P+ T
Sbjct: 487 EKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTV 546
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PWVL-ERMER 424
L+ K +M EM ++ S +E F ++ + V W + ++M+R
Sbjct: 547 LVDMFSKRGKMSKALNLFKEMAEEGLS--RDEFAFTAIIDGYCRVGNVKRAWSMYKKMKR 604
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
N + TY ++ + D ++M++ + PD ++YT +I G ++
Sbjct: 605 NNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDR 664
Query: 485 ALSYFHEMRLKGMVPE 500
A F EM+ KG +P+
Sbjct: 665 AYEVFDEMKKKGTLPD 680
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 151/359 (42%), Gaps = 44/359 (12%)
Query: 160 NAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHM-----VEEAIGVF 211
N +L L + + +FD++ + N TY I++N Y +E+A +
Sbjct: 154 NFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLIL 213
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF-GYDIKTMNIILNGWCVL 270
+ +E GE + + + LCR +E A + ++ +I N ++ G+C
Sbjct: 214 EEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQK 273
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G EA + +++ PD +Y+ VNA +G + + + L Q M +KP +V C
Sbjct: 274 GRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCC 333
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
++ L K + + L E+ +G ++ +Y++LI K +++ + EM +
Sbjct: 334 TSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEM-R 392
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
KNG +P+ I + L++ Y C +
Sbjct: 393 KNG-LVPDYIIYISLIRE--------------------------------YCRKGCLKEA 419
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
+ M + G+ PD + ++ +G+ E+AL Y ++M+ + ++P T +++N
Sbjct: 420 LKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIIN 478
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 130/295 (44%), Gaps = 33/295 (11%)
Query: 229 LLLWLCRYKHVEVA-ETFFESEKNEFG--YDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
L++ L + + EVA + F N +G Y I I++ + + G EA+ DI+
Sbjct: 29 LVVELLKTLNWEVARQVKFSKSVNVYGFFYSINAFRTIVHVFALAGLQREAQYLLTDIVF 88
Query: 286 SKCEPD---SVTYATFVNALTKKGKLGTALRL-----------------FQAMWEKGRKP 325
E + S ++TF+++ G+ T L L F + G +
Sbjct: 89 YYKEENLNVSGLFSTFLDSPECVGRSATVLSLLIKVFASNKMLADAKDVFMQAKKIGVEL 148
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR-----MET 380
++ +CN ++ L ++ + ++KN G PNV TY +I CK + ME
Sbjct: 149 NISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQ 208
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PW-VLERMERNGCKMSTDTYNVI 437
L+EME+K + P +T+ + L + + W ++ + + ++ YN +
Sbjct: 209 ASLILEEMEEKGEN--PTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNAL 266
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
++ + D+ EEM+ +G+ PD SY+++++ +G +E ++ EM
Sbjct: 267 IQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEM 321
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 167/410 (40%), Gaps = 52/410 (12%)
Query: 136 WEAAYTFFKWVSREG------------------------------DYSPGSNV----FNA 161
WE A +W S EG PGS + +
Sbjct: 35 WEWALALLRWASDEGAADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTT 94
Query: 162 ILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYA-AAHMVEEAIGVFDRR 214
+L L RA R+ +Q+F E+ P +V TY ++L+ Y + + +
Sbjct: 95 VLHALSRAGRYERALQLFAELRRQGVVPTIV---TYNVVLDVYGRMGRSWPRIVALLEEM 151
Query: 215 KEFG-ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD-IKTMNIILNGWCVLGN 272
+ G E DD +A ++ R ++ A FFE K + T N +L + GN
Sbjct: 152 RAAGVEPDDFTA-STVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGN 210
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
EA R K++ S C+PD+VTY + G A + M KG P+ T N
Sbjct: 211 YTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 270
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
++ A R+ EAL + MK G +PNV TYN + L K R + E L+EM +
Sbjct: 271 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 330
Query: 393 GSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
C PN +T+N +L K + V VL M+ G ++S DTYN ++ Y
Sbjct: 331 --CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTY 388
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++EM G P +Y +++ L +G A S +M G P
Sbjct: 389 AFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKP 438
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 6/224 (2%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI-PEALEV 349
D Y T ++AL++ G+ AL+LF + +G P +VT N ++D R P + +
Sbjct: 88 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVAL 147
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
L EM+ G P+ T +++I + ++ + ++++ + +P +T+N LL+
Sbjct: 148 LEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGH--VPCVVTYNALLQVF 205
Query: 410 KKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K E VL+ ME +GC+ TYN + Y ++ + M KG+ P+
Sbjct: 206 GKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNT 265
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDM 510
+Y ++ + GR+++AL+ F M+ G VP T L+ M
Sbjct: 266 FTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGM 309
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 159/392 (40%), Gaps = 52/392 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + +N + RA F E + D M L N TY ++ YA V+EA+ +
Sbjct: 228 PDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALAL 287
Query: 211 FDRRKE-------------FGELDDLSAFQ---------------------NLLLWLCRY 236
FDR K+ FG L S F N +L +C
Sbjct: 288 FDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGK 347
Query: 237 KHVEVAETFFESEKNEFGYDIK--TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ +E T + G ++ T N +++ + G+ A + + ++I S P T
Sbjct: 348 RGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTT 407
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y +N L+++G TA + M + G KP+ + + ++ + +E+
Sbjct: 408 YNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVY 467
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP-- 412
P+ +L+ K +R+E V + E++ + P+ + FN +L K
Sbjct: 468 VGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYK--PDLVIFNSMLAMYAKNGL 525
Query: 413 -EEVPWVLERMERNGCKMSTDTYNVILKLYV----NWDCEDKVRHTWEEMEKKGMGPDQR 467
+ + + ++++G TYN ++ +Y +W+ E ++ +++ + PD
Sbjct: 526 YSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILK----QLKSSQVKPDVV 581
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
SY +I+G +G +++A EM GM P
Sbjct: 582 SYNTVINGFCKQGLIKEAQRILSEMIADGMAP 613
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 12/279 (4%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
T + ++NV++R + DW A + + + G + P ++ +L + + +
Sbjct: 407 TYNALLNVLSR-QGDWSTAQSIVSKMLKNG-FKPNDQSYSLLLQCYAKGGNAAGIESIEK 464
Query: 181 EM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
E+ P V +T I + VE+A F K G DL F ++L
Sbjct: 465 EVYVGTIFPSWVILRTLVIANFKCRRLEGVEKA---FQEVKAQGYKPDLVIFNSMLAMYA 521
Query: 235 RYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ A F+S K D+ T N +++ + +EA++ K + S+ +PD V
Sbjct: 522 KNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVV 581
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
+Y T +N K+G + A R+ M G P VVT + ++ + EA EV+ M
Sbjct: 582 SYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 641
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+ P TY ++ CK KR + E+L E+ +
Sbjct: 642 IHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTD 680
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 134/312 (42%), Gaps = 21/312 (6%)
Query: 112 ALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR-EGDYSPGSNVFNAILDVLGRAR 170
+ C + L+ D +I+ Y Y F + ++P +NA+L+VL R
Sbjct: 360 GMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQG 419
Query: 171 RFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF--GEL-D 221
+ + +M P N+++Y +LL YA A G+ KE G +
Sbjct: 420 DWSTAQSIVSKMLKNGFKP---NDQSYSLLLQCYAKGG---NAAGIESIEKEVYVGTIFP 473
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRF 279
+ L++ + + +E E F+ K + GY D+ N +L + G +A
Sbjct: 474 SWVILRTLVIANFKCRRLEGVEKAFQEVKAQ-GYKPDLVIFNSMLAMYAKNGLYSKATEM 532
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
+ I +S PD +TY + ++ K + A ++ + + KPDVV+ N +I+ C
Sbjct: 533 FDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCK 592
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ I EA +L EM G P V TY++L+ ++ E ++ M N P E
Sbjct: 593 QGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHN--LKPME 650
Query: 400 ITFNYLLKSLKK 411
+T+ ++ S K
Sbjct: 651 LTYRRVVDSYCK 662
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 153/396 (38%), Gaps = 45/396 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV------ 186
A F + + G Y P N +N I +LG+ RF ++++ +EM P+ V
Sbjct: 284 ALALFDRMKKNG-YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTML 342
Query: 187 --------------------------NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
+ TY L++ Y A ++D G
Sbjct: 343 AVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFT 402
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
L+ + LL L R A++ KN F + ++ +++L + GN +
Sbjct: 403 PCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESI 462
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K++ P V T V A K +L + FQ + +G KPD+V N ++
Sbjct: 463 EKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAK 522
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+A E+ +K G P++ TYNSL+ K + L ++ K+ P+
Sbjct: 523 NGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQL--KSSQVKPDV 580
Query: 400 ITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
+++N ++ K +E +L M +G TY+ ++ Y + + ++ R
Sbjct: 581 VSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNY 640
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
M + P + +Y ++ R ++A + E+
Sbjct: 641 MIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI 676
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 175/381 (45%), Gaps = 16/381 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKT 190
EAA + G + P +N ++ L R+ ++V D+ MP ++ T
Sbjct: 154 EAATQVLNRMKARG-FLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVI---T 209
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y IL+ + EA+ + + G L D+ + ++ +C+ VE A S
Sbjct: 210 YTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLT 269
Query: 251 NE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
++ D+ + NI+L + G E ++ ++ CEP+ VTY+ +++L + G++
Sbjct: 270 SKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRID 329
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+ + + M EK PD + + +I ALC + R+ A+ ++ M + GCLP++ YN+++
Sbjct: 330 EAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTIL 389
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
LCK E +++ + C PN ++N ++ +L ++ M G
Sbjct: 390 AALCKNGNANQALEIFNKL--RGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 447
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
TYN ++ ++ ++ME+ G P SY +++ GL R++DA+
Sbjct: 448 VDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 507
Query: 487 SYFHEMRLKGMVPEPRTGILV 507
F EM KG P T IL+
Sbjct: 508 GMFAEMIEKGCRPNETTYILL 528
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 162/371 (43%), Gaps = 45/371 (12%)
Query: 168 RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
+A R +E+++ E PD+ Y +++ + + +E A V +R K G L D+ +
Sbjct: 121 KASRVMEILESHTE-PDVF---AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYN 176
Query: 228 NLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
++ LC + + +A + + + T I++ V G + EA + ++++
Sbjct: 177 IMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLAR 236
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
PD TY + + K+G + A L ++ KG KPDV++ N ++ A + + E
Sbjct: 237 GLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEG 296
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK--------------- 391
+++ EM +RGC PN TY+ LI LC+ R++ L M +K
Sbjct: 297 EKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 356
Query: 392 ------------------NGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMS 430
+ CLP+ + +N +L +L K LE ++ GC +
Sbjct: 357 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 416
Query: 431 TDTYNVILKLYVNWDCEDKVRHTW--EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+YN ++ W C D+ R M KG+ PD+ +Y +I L G +E+A+
Sbjct: 417 VSSYNTMISAL--WSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGL 474
Query: 489 FHEMRLKGMVP 499
+M G P
Sbjct: 475 LDDMEQSGFRP 485
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 12/228 (5%)
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+N K GK +L + + KG PDV+ C +I K I +A V+ E+
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEE 414
P+V YN++I CK+ R+E + L+ M+ + LP+ +T+N ++ SL +K
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKAR--GFLPDIVTYNIMIGSLCNRRKLGL 190
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
VL+++ + C + TY ++++ + ++ EEM +G+ PD +Y +I
Sbjct: 191 ALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIR 250
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
G+ +G +E A + KG P+ V NI L+ QGK
Sbjct: 251 GMCKEGMVERAAELITSLTSKGCKPD------VISYNILLRAFLNQGK 292
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 171/388 (44%), Gaps = 13/388 (3%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP 183
L+V V+N R A FF+W R+ + + ILD+L R V +++
Sbjct: 49 LLVRVLNTVRHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVV 108
Query: 184 DLVNEKTYGILLNR------YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL-CRY 236
+ E +L YA M+E+ + VF + G L DL +L L R
Sbjct: 109 SVKMENGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRD 168
Query: 237 KHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
++VA E + + + T N +L+ +C G V EA + + K C P+ VTY
Sbjct: 169 SSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTY 228
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
VN L+ G+L A L Q M G + T + +I C K ++ EA + EM +
Sbjct: 229 NVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLS 288
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL---KSLKKP 412
RG +P + TYN+++ LCK R+ + LD M KN +P+ +++N L+ L
Sbjct: 289 RGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKN--LMPDLVSYNTLIYGYTRLGNI 346
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
E + + G S TYN ++ D +EM K G PD ++T++
Sbjct: 347 GEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTIL 406
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ G G L A F EM +G+ P+
Sbjct: 407 VRGFCKLGNLPMAKELFDEMLNRGLQPD 434
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 161/353 (45%), Gaps = 9/353 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P +N +++ L + + ++ EM L V+ TY L+ Y ++EA +
Sbjct: 223 PNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRL 282
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
+ G + L + ++ LC++ V A + N+ D+ + N ++ G+
Sbjct: 283 GEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTR 342
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
LGN+ EA + ++ P VTY T ++ L + G L A+RL M + G PDV T
Sbjct: 343 LGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFT 402
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
++ C +P A E+ EM NRG P+ Y + I K+ + +EM
Sbjct: 403 FTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEML 462
Query: 390 QKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ P+ IT+N + L K +E ++++M NG TY I+ ++
Sbjct: 463 ARGFP--PDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 520
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
K R + EM KG+ P +YTV+IH +GRL+ A+ +F EM KG+ P
Sbjct: 521 LRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHP 573
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 161/342 (47%), Gaps = 15/342 (4%)
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
AR+ ++++ + MPDLV +Y L+ Y + EA +F + G + + +
Sbjct: 314 ARKLLDVMVNKNLMPDLV---SYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNT 370
Query: 229 LLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
L+ LCR ++VA E K+ D+ T I++ G+C LGN+ AK + +++
Sbjct: 371 LIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRG 430
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
+PD Y T + K G A + + M +G PD++T N ID L + EA
Sbjct: 431 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 490
Query: 348 EVLREMKNRGCLPNVTTYNSLI-KHLCK--IKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
E++++M G +P+ TY S+I HL +++ V+ +E + P+ +T+
Sbjct: 491 ELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVF-----LEMLSKGIFPSVVTYTV 545
Query: 405 LLKSLKKPEEVPWVLER---MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ S + + M G + TYN ++ D+ + EM+ KG
Sbjct: 546 LIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKG 605
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ P++ +YT++I+ + G ++AL + +M + + P+ T
Sbjct: 606 ISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCT 647
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 16/262 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N ++D L R +++ DEM PD+ T+ IL+ + + A
Sbjct: 363 PSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVF---TFTILVRGFCKLGNLPMA 419
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK---NEFGYDIKTMNIIL 264
+FD G D A+ ++ K + ++ F E+ F D+ T N+ +
Sbjct: 420 KELFDEMLNRGLQPDRFAYITRIVG--ELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI 477
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G LGN+ EA K ++ + PD VTY + ++A G L A +F M KG
Sbjct: 478 DGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIF 537
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P VVT +I + + R+ A+ EM +G PNV TYN+LI LCK+++M+ Y++
Sbjct: 538 PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKF 597
Query: 385 LDEMEQKNGSCLPNEITFNYLL 406
EM+ K S PN+ T+ L+
Sbjct: 598 FTEMQAKGIS--PNKYTYTILI 617
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ES 248
TY +L++ YA ++ AI F E G ++ + L+ LC+ + ++ A FF E
Sbjct: 542 TYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEM 601
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ + T I++N C LG+ EA R +KD++ + +PDS T++ + L K K
Sbjct: 602 QAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYK 660
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 7/185 (3%)
Query: 157 NVFNAILDVLGRARRFVELIQ--VFDEM-PDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
NVF L LG + EL++ +++ + PD V TY +++ + A + +A VF
Sbjct: 474 NVFIDGLHKLGNLKEASELVKKMLYNGLVPDHV---TYTSIIHAHLMAGHLRKARAVFLE 530
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAET-FFESEKNEFGYDIKTMNIILNGWCVLGN 272
G + + L+ +++A FFE + ++ T N ++NG C +
Sbjct: 531 MLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRK 590
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+ +A +F+ ++ P+ TY +N G ALRL++ M ++ +PD T +
Sbjct: 591 MDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSA 650
Query: 333 IIDAL 337
++ L
Sbjct: 651 LLKHL 655
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 176/401 (43%), Gaps = 19/401 (4%)
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGI 193
++F + R G SP ++FN + + + E + +FD+M P +VN YG
Sbjct: 327 HSFLDLMVRNG-VSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVN---YGA 382
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE-TFFESEKNE 252
L++ V++A+ F++ G D+ F +L+ LC E AE FFE
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQG 442
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ NI++ C G V EA+R +++ PD ++Y T V+ G++ A
Sbjct: 443 IRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAA 502
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+L M G KPD T N ++ C +RI +A + REM +G P V TYN+++ L
Sbjct: 503 KLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGL 562
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKM 429
+I R E M C + T+ +L L + +E + + + ++
Sbjct: 563 FQIGRFCEAKELYLNMINNRRKC--DIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQL 620
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
T N+++ + ++ + + G+ PD +Y ++ L +G LE+ F
Sbjct: 621 DIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELF 680
Query: 490 HEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSL 530
M G P R ++N + L RG+ G+ + L+ L
Sbjct: 681 SAMEENGTAPNSR---MLNALVRWLLHRGDIGRAGVYLSKL 718
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 161/362 (44%), Gaps = 17/362 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVE 205
+G ++P + ++D L +A+ VF M D N TY L++ Y + +
Sbjct: 195 DGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWK 254
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIIL 264
E + + G D + LL +LC+ A F+S + + I+L
Sbjct: 255 EVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILL 314
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G+ G + E F ++++ PD + NA KK + A+ +F M ++
Sbjct: 315 HGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLS 374
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV--- 381
P VV +IDALC R+ +A+ +M N G P++ ++SL+ LC + + E
Sbjct: 375 PGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKL 434
Query: 382 -YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
+E LD+ + N + FN L+ +L + E +++ M R + +YN +
Sbjct: 435 FFEVLDQGIRLNAA------FFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTL 488
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + D+ + M G+ PD+ +Y ++HG R++DA S F EM +KG+
Sbjct: 489 VDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGL 548
Query: 498 VP 499
P
Sbjct: 549 TP 550
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 140/313 (44%), Gaps = 19/313 (6%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE---TFFESEKNEFGYDIK-- 258
+++A+ +FD + + F LL + R + +E + F E +
Sbjct: 32 LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91
Query: 259 --TMNIILNGWCVLGNVYEAKRFWKDIIKSKCE-PDSVTYATFVNALTKKGKLGTALR-L 314
T I++ +C +G + + I+K+ ++V + + L ++ A L
Sbjct: 92 SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDIL 151
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG---CLPNVTTYNSLIKH 371
+ M E G +V++ N ++ LC +KR EALE++ M + G PNV TY ++I
Sbjct: 152 LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDG 211
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCK 428
LCK + ++ M K PN T+ L+ S K +EV +L+ M +G +
Sbjct: 212 LCKAQMVDRAKGVFQHMIDK--GVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQ 269
Query: 429 MSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
Y V+L L N C + R+ ++ + +KG+ P Y +++HG +G L + S
Sbjct: 270 PDCVIYAVLLDYLCKNGRCTE-ARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHS 328
Query: 488 YFHEMRLKGMVPE 500
+ M G+ P+
Sbjct: 329 FLDLMVRNGVSPD 341
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 18/217 (8%)
Query: 303 TKKGKLGT--ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR---- 356
+ G LG AL+LF M R V T N ++ + + R A E++ + NR
Sbjct: 25 ARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVS-RARCSSASELVVSLFNRMIRE 83
Query: 357 ---GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---- 409
P+ TY LI C++ R++ + + K G L N + F LLK L
Sbjct: 84 CSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFG-LILKTGWSLNNTVIFGQLLKGLCDAK 142
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG---PDQ 466
+ E +L RM GC ++ +YN++LK N ++ M G G P+
Sbjct: 143 RVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNV 202
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+YT +I GL ++ A F M KG+ P T
Sbjct: 203 VTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHT 239
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 134/330 (40%), Gaps = 36/330 (10%)
Query: 67 AQLVHSLANSD--EKSE--FQRYPGDEIAINVQ--NILKTCSVSTKGEIEKALNQCELTL 120
+ LV+ L D EK+E F I +N NIL C++ +G + +A +L L
Sbjct: 416 SSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNIL-MCNLCREGRVMEAQRLIDLML 474
Query: 121 TDDLIVNVIN----------RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRAR 170
D+ +VI+ R D EAA VS P +N +L +AR
Sbjct: 475 RVDVRPDVISYNTLVDGHCLTGRID-EAAKLLDVMVSI--GLKPDEFTYNTLLHGYCKAR 531
Query: 171 RFVELIQVFDEM------PDLVNEKT--YGIL-LNRYAAAHMVEEAIGVFDRRKEFGELD 221
R + +F EM P +V T +G+ + R+ A E + + + R++
Sbjct: 532 RIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAK--ELYLNMINNRRKC---- 585
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D+ + +L LCR V+ A F+S + DI T+NI++ G +A +
Sbjct: 586 DIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLF 645
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
I PD TY L K+G L LF AM E G P+ N ++ L +
Sbjct: 646 ATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHR 705
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
I A L ++ + +T + LI
Sbjct: 706 GDIGRAGVYLSKLDEKNFSLEASTTSMLIS 735
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 170/366 (46%), Gaps = 20/366 (5%)
Query: 152 YSPGSNVFNAILDVLGRARRFVEL----IQVFDEMPDLVNEKTYGILLNRYAAAHMVEE- 206
++ G + + LD+ R RR +L + +F +T+ IL R A + +
Sbjct: 88 HAVGPSTLDLALDLSARLRRPRQLTNSILGLFPRHRLAFTPRTFPILFERLAVSQRRPDL 147
Query: 207 AIGVF-DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILN 265
A+ +F + DL F +LL L + +H A + + + F D+ T N + +
Sbjct: 148 AVRLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQRFTPDVVTYNTLAD 207
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR-- 323
GWC + + A + +++S P TY + + G+L A F M ++G
Sbjct: 208 GWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKD 267
Query: 324 ---KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KPDVV+ ++ L ++ +A +V EM GC P+V TYN+LI+ +CK +E
Sbjct: 268 ESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVED 327
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
D M K +PN +T+ L++ L K + +LERM+ GC+ TYNV+
Sbjct: 328 AVTVFDGMLVKG--YVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVL 385
Query: 438 LKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLED---ALSYFHEMR 493
++ +K +E+M K + P+Q +Y ++I ++ + R ED A EM
Sbjct: 386 IRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVDEMV 445
Query: 494 LKGMVP 499
+G +P
Sbjct: 446 DRGYLP 451
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 120/239 (50%), Gaps = 15/239 (6%)
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D + + ++AL+K G A L +A+ E+ PDVVT N + D C K AL+VL
Sbjct: 164 DLPLFNSLLDALSKSRHAGKAASLVRAL-EQRFTPDVVTYNTLADGWCRVKDTSRALDVL 222
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ---KNGSCLPNEITFNYLLK 407
R M G P TTYN ++K + ++ +++ +M++ K+ SC P+ +++ ++
Sbjct: 223 RLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVH 282
Query: 408 SLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYV-NWDCEDKVRHTWEEMEKKGMG 463
L + E+ V + M + GC S TYN ++++ + ED V ++ M KG
Sbjct: 283 GLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVT-VFDGMLVKGYV 341
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
P+ +YTV+I GL G+++ L M+ G P +V N+ ++ E+G+
Sbjct: 342 PNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEP------IVQTYNVLIRYLFEEGE 394
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 41/250 (16%)
Query: 130 NRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK 189
+ R W+ K S++ P + ++ LG A + + +VFDEM
Sbjct: 248 GQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMA------ 301
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
KE G ++ + L+ +C+ +VE A T F+
Sbjct: 302 -------------------------KE-GCAPSVATYNALIQVICKKGNVEDAVTVFDGM 335
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ GY ++ T +++ G C G + + + + CEP TY + L ++G+
Sbjct: 336 LVK-GYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGE 394
Query: 308 LGTALRLFQAMWEKGRK--PDVVTCNCIIDALCFKKRIPE---ALEVLREMKNRGCLPNV 362
+ L LF+ M KG + P+ T N II A+ +KR + A ++ EM +RG LP
Sbjct: 395 MEKGLDLFEKM-SKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVDEMVDRGYLPRR 453
Query: 363 TTYNSLIKHL 372
+N ++ L
Sbjct: 454 FMFNRVLNGL 463
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 182/430 (42%), Gaps = 60/430 (13%)
Query: 128 VINRYR---FDWEAAYTFFKWVSREGDYSPGS-NVFNAILDVLGRA------RRFVEL-I 176
++NR+R E A F + + P S + FN++L V+ RA R L +
Sbjct: 19 ILNRHRSGSLGREDALNLFDELLPQA--RPASVHAFNSVLTVVARADSSSSPRHSAALAV 76
Query: 177 QVFDEMPD------LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+F+ M N GIL+ + ++ A F + G L+
Sbjct: 77 SLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLI 136
Query: 231 LWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKS-- 286
LC K + A E GY D+ + N ++ G CV EA +
Sbjct: 137 KGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGG 196
Query: 287 -KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
C P+ V+Y+T ++ K+G++ A LF M +G PDVVT + +ID LC + + +
Sbjct: 197 YNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNK 256
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ--------------- 390
A +L+ M ++G +PN TYN +I+ C + ++E L +M
Sbjct: 257 AEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQ 316
Query: 391 ---KNGSCLPNEITFNYLLKSLKKPEEVPW------------------VLERMERNGCKM 429
K G C F+ +++ +KP + +L+ M R+G
Sbjct: 317 YYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPF 376
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+N+++ Y DK + EM + G+ PD SY+ +IH L GR+EDA+ +F
Sbjct: 377 EHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHF 436
Query: 490 HEMRLKGMVP 499
++M +G+ P
Sbjct: 437 NQMVSEGLSP 446
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 175/425 (41%), Gaps = 47/425 (11%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGI 193
E A K +S G P + ++ + R E VFD M N Y I
Sbjct: 290 EEAVRLLKKMSGSG-LQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHI 348
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNE 252
LL+ YA + + + D G + AF L+ ++ V+ A T F E +N
Sbjct: 349 LLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG 408
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D+ + + +++ C +G V +A + ++ P+ +++ + ++ L G+
Sbjct: 409 LRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVE 468
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L M +G PD + N I+D LC + R+ EA + + + G PNV +YN+LI
Sbjct: 469 ELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGY 528
Query: 373 CKIKRMETVYEYLDEMEQ------------------KNGS-----CLPNE---------- 399
C + +M+ + D M KNG L E
Sbjct: 529 CFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCA 588
Query: 400 ITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
IT N +L L + + E +M G ++ +TYN +L C D+ +E+
Sbjct: 589 ITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFED 648
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKE 516
+ K D ++ ++I+ L GR+++A S F M L+G VP T ++ +K
Sbjct: 649 LRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVIT------YSLMIKS 702
Query: 517 RGEQG 521
R E+G
Sbjct: 703 RIEEG 707
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 181/433 (41%), Gaps = 82/433 (18%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---------PDLVNEKTYGILLNRYA 199
E Y+P +NA++ L ++ E +++ M P++V +Y +++ +
Sbjct: 158 ELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVV---SYSTIIDGFF 214
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIK 258
V++A +FD G D+ + +L+ LC+ + + AE + ++ + +
Sbjct: 215 KEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTR 274
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T NI++ G+C LG + EA R K + S +PD VTY + K G+ A +F +M
Sbjct: 275 TYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSM 334
Query: 319 WEKGRKPDVVTCNCII---------------------DALCFKKR--------------I 343
KG+KP+ + ++ D + F+ R +
Sbjct: 335 VRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAV 394
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
+A+ EM+ G P+V +Y+++I LCKI R+E + ++M + S PN I+F
Sbjct: 395 DKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLS--PNIISFT 452
Query: 404 YLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
L+ L C + W KV EM +G+
Sbjct: 453 SLIHGL-----------------CSIG------------EWK---KVEELAFEMINRGIH 480
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKK 523
PD ++ L +GR+ +A +F + G+ P + + D + + E K+
Sbjct: 481 PDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQ 540
Query: 524 VIKLTSLGLKGNA 536
++ S+GL+ ++
Sbjct: 541 FDRMVSIGLRPDS 553
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 151/365 (41%), Gaps = 56/365 (15%)
Query: 193 ILLNRYAAAHMV-EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY------KH-----VE 240
I+LNR+ + + E+A+ +FD + AF ++L + R +H V
Sbjct: 18 IILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVS 77
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ T S N + + I++ +C +G + A + +K +VT +
Sbjct: 78 LFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIK 137
Query: 301 ALTKKGKLGTALRL-FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL--------- 350
L + A+ + F+ M E G PDV + N +I LC +K+ EALE+L
Sbjct: 138 GLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGY 197
Query: 351 -----------------------------REMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
EM +G P+V TY+SLI LCK + M
Sbjct: 198 NCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKA 257
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVIL 438
L M K +PN T+N +++ SL + EE +L++M +G + TY +++
Sbjct: 258 EAILQHMFDKG--VMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLI 315
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ Y + R ++ M +KG P+ Y +++HG KG L D M G+
Sbjct: 316 QYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIP 375
Query: 499 PEPRT 503
E R
Sbjct: 376 FEHRA 380
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 6/279 (2%)
Query: 233 LCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LC+ V A+ FF+ + ++ + N +++G+C +G + E+ + + ++ PD
Sbjct: 493 LCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPD 552
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
S TY +N K G++ AL L++ M+ K K +T N I+ L RI A E+
Sbjct: 553 SWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYM 612
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
+M +RG + TYN+++ LC+ ++ +++ K + TFN ++ +L K
Sbjct: 613 KMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFEL--DVWTFNIVINALLK 670
Query: 412 P---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
+E + M G TY++++K + ++ + MEK G D
Sbjct: 671 VGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHM 730
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
V+I L +KG + A +Y ++ K E T L+
Sbjct: 731 LNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALL 769
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 4/197 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM--PDL-VNEKTYGILLNRYAAAHMVEEAIGV 210
P S +NA+L+ + R + + ++ EM D+ T I+L+ A + A +
Sbjct: 551 PDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAAREL 610
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNIILNGWCV 269
+ + + G + + +L LC V+ A FE ++ EF D+ T NI++N
Sbjct: 611 YMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLK 670
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+G + EAK + ++ P +TY+ + + ++G L + LF +M + G D
Sbjct: 671 VGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHM 730
Query: 330 CNCIIDALCFKKRIPEA 346
N II L K + A
Sbjct: 731 LNVIIRRLLEKGDVRRA 747
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 186/442 (42%), Gaps = 80/442 (18%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
AY K ++++G + P V+N ++D A + I++ D M + TY L+
Sbjct: 362 AYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 420
Query: 196 NRYA-------AAHMVEEAIGV---------------------FDRRKEF-GE--LDDLS 224
Y A +++E + + FD F GE L ++S
Sbjct: 421 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 480
Query: 225 A----FQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
L+ LC++ KH + E +F+ F D +T N +L+G C G + EA R
Sbjct: 481 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 540
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K+I+ C D V+Y T ++ K KL A M ++G KPD T + +I L
Sbjct: 541 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 600
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
++ EA++ + K G LP+V TY+ +I CK +R E E+ DEM KN PN
Sbjct: 601 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ--PNT 658
Query: 400 ITFNYLLKS--------------------------------------LKKPEEVPWVLER 421
+ +N+L+++ + + EE + E
Sbjct: 659 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 718
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M G + + Y ++ Y KV EM K + P++ +YTVMI G G
Sbjct: 719 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 778
Query: 482 LEDALSYFHEMRLKGMVPEPRT 503
+ +A +EMR KG+VP+ T
Sbjct: 779 VTEASRLLNEMREKGIVPDSIT 800
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 124/269 (46%), Gaps = 9/269 (3%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T NI+L V N ++ D++ PD + T +NA K GK+ A++LF M
Sbjct: 241 TCNILLTSL-VRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 299
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
E G P+VVT N +ID L R EA +M RG P + TY+ L+K L + KR+
Sbjct: 300 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 359
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYN 435
Y L EM +K PN I +N L+ S + + +E M G +++ TYN
Sbjct: 360 GDAYFVLKEMTKKGFP--PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 417
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++K Y D +EM G +Q S+T +I L + AL + EM L+
Sbjct: 418 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 477
Query: 496 GMVPEPRTGILVNDMNIKLKERGEQGKKV 524
M P G L+ + L + G+ K +
Sbjct: 478 NMSP---GGGLLTTLISGLCKHGKHSKAL 503
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 149/343 (43%), Gaps = 9/343 (2%)
Query: 151 DYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
+ SPG + ++ L G+ + +EL F +V+ +T LL+ A ++EA
Sbjct: 478 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 537
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNG 266
+ G + D ++ L+ C K ++ A F E K D T +I++ G
Sbjct: 538 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 597
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ V EA +FW D ++ PD TY+ ++ K + F M K +P+
Sbjct: 598 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 657
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V N +I A C R+ ALE+ +MK++G PN TY SLIK + I R+E +
Sbjct: 658 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 717
Query: 387 EMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM + PN + L+ L + +V +L M + TY V++ Y
Sbjct: 718 EMRMEGLE--PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 775
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ EM +KG+ PD +Y I+G +G + +A
Sbjct: 776 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 818
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 173/389 (44%), Gaps = 19/389 (4%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
++ A+ F + + G P ++ ++ L RA+R + V EM P+++
Sbjct: 324 YDEAFMFKEKMVERG-MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI--- 379
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
Y L++ + A + +AI + D G S + L+ C+ + AE + E
Sbjct: 380 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK-E 438
Query: 250 KNEFGYDIK--TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
G+++ + ++ C A RF +++ P T ++ L K GK
Sbjct: 439 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 498
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
AL L+ KG D T N ++ LC ++ EA + +E+ RGC+ + +YN+
Sbjct: 499 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 558
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL---LKSLKKPEEVPWVLERMER 424
LI C K+++ + +LDEM ++ P+ T++ L L ++ K EE + +R
Sbjct: 559 LISGCCGKKKLDEAFMFLDEMVKRGLK--PDNYTYSILICGLFNMNKVEEAIQFWDDCKR 616
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
NG TY+V++ + ++ + ++EM K + P+ Y +I GRL
Sbjct: 617 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 676
Query: 485 ALSYFHEMRLKGMVPEPRT-GILVNDMNI 512
AL +M+ KG+ P T L+ M+I
Sbjct: 677 ALELREDMKHKGISPNSATYTSLIKGMSI 705
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 157/370 (42%), Gaps = 52/370 (14%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTY--GILLN 196
A F ++ +G + P N +L L RA F + + FD + V+ Y +N
Sbjct: 223 ALDVFPVLANKGMF-PSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAIN 281
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD 256
+ VEEA+ +F + +E G VA +
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAG----------------------VAP------------N 307
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ T N +++G + G EA F + +++ EP +TY+ V LT+ ++G A + +
Sbjct: 308 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK 367
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M +KG P+V+ N +ID+ + +A+E+ M ++G +TYN+LIK CK
Sbjct: 368 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 427
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFN----YLLKSLKKPEEVPWVLERMERNGCKMSTD 432
+ + L EM + N+ +F L L + +V E + RN MS
Sbjct: 428 QADNAERLLKEMLSIGFNV--NQGSFTSVICLLCSHLMFDSALRFVGEMLLRN---MSPG 482
Query: 433 TYNVILKLYVNWDCE----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+L ++ C+ K W + KG D R+ ++HGL + G+L++A
Sbjct: 483 --GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 540
Query: 489 FHEMRLKGMV 498
E+ +G V
Sbjct: 541 QKEILGRGCV 550
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 11/240 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKT 190
+ A+ F + + G P + ++ ++ L + E IQ +D+ +PD+ T
Sbjct: 570 DEAFMFLDEMVKRG-LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY---T 625
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y ++++ A EE FD + + +L+ CR + +A E K
Sbjct: 626 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 685
Query: 251 NE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
++ + T ++ G ++ V EAK ++++ EP+ Y ++ K G++
Sbjct: 686 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 745
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
L + M K P+ +T +I + EA +L EM+ +G +P+ TY I
Sbjct: 746 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 805
>gi|218196531|gb|EEC78958.1| hypothetical protein OsI_19424 [Oryza sativa Indica Group]
Length = 975
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 159/350 (45%), Gaps = 38/350 (10%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEA 207
D P S+ FN ++ L + ++ + + +M L + + L++ +EE
Sbjct: 435 DAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEG 494
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNG 266
G+F++ K+ G + +L +CR K+ + A + E + N IK ++
Sbjct: 495 YGIFNQMKDLGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQ 554
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G V EA +F +++ PD VTY+ +N + G++ AL LF+ + K PD
Sbjct: 555 LCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPD 614
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VV N +I+ ++ EA +++ EM +G P+V TYN +I CK R+E YLD
Sbjct: 615 VVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLD 674
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+M + E+ P V+ TY ++ + +
Sbjct: 675 KMVYE---------------------EKQPTVI-------------TYTSLIDGFCSAGR 700
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
D+ W EM +KG P+ +YT I+GL GR+E AL+YF EM KG
Sbjct: 701 PDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKG 750
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 164/359 (45%), Gaps = 28/359 (7%)
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
G+ VEL+ + + ++EKT +L++ + V++A+ +F + +G + DL+ +
Sbjct: 259 GKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMY 318
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
L+ LC+ K + A F+ K+ D++ + ++ +C G+ F + +
Sbjct: 319 SVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAE 378
Query: 286 SKCEPDSVT-YATFVNALTKKGKLGTALRLFQAMWEKGR-------------------KP 325
V Y + L G++ A +L ++M G+ KP
Sbjct: 379 YLKSGSVVPLYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKP 438
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ + N ++ LC K++ AL + ++M + GC + +N LI LC + R+E Y
Sbjct: 439 NSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIF 498
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG-CKMSTDTYNVILKLY 441
++M K+ P+E T+N L + K P+ +L M+ NG + ++ +L
Sbjct: 499 NQM--KDLGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQLC 556
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ + V+ + M + G PD +Y+ ++G+ + G ++DAL F ++ K +P+
Sbjct: 557 FSGRVTEAVQF-LDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPD 614
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 148/380 (38%), Gaps = 67/380 (17%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEA 207
+P S +N +LD L +A R + EM V++ T LL Y A ++A
Sbjct: 171 TPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPDDA 230
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
VF R E G +D+ HV + T+ + + W
Sbjct: 231 NDVFQRMSELGWVDE---------------HV-----------------LTTLMVAFSKW 258
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
G V A + T + V+ TK+G++ A+ +F M G D+
Sbjct: 259 ---GKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDL 315
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I+ LC +K I A+++ +EMK+ G P+V +I+ C+ + +++E
Sbjct: 316 AMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINE 375
Query: 388 MEQ--KNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC------------------ 427
+ K+GS +P +N +L+ L EV + + C
Sbjct: 376 NAEYLKSGSVVP---LYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHI 432
Query: 428 ----KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
K ++D++N+++ D ++M G + +IH L + RLE
Sbjct: 433 REDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLE 492
Query: 484 DALSYFHEMRLKGMVPEPRT 503
+ F++M+ G+ P T
Sbjct: 493 EGYGIFNQMKDLGLTPSEFT 512
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 9/231 (3%)
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK-GRKPDVVTCNCIIDA 336
R D I ++C + L G TA+R F A G P+ T NC++DA
Sbjct: 124 RLAADAISARCLMTPGALGFLLRCLGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDA 183
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTY--NSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
L R +A LREM R +V Y SL++ C R + + M +
Sbjct: 184 LAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPDDANDVFQRMSELG-- 241
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
+E L+ + K +V +E ME G ++S T +V++ + DK
Sbjct: 242 -WVDEHVLTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAM 300
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ +M G D Y+V+I GL + + A+ F EM+ G+ P+ R
Sbjct: 301 DMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVR 351
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 178/401 (44%), Gaps = 44/401 (10%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRY 198
+ + R+G P + +N ++ + RA R + ++VFDEM + L N TY +++ +
Sbjct: 1 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE---SEK---NE 252
+E + D+ G + + LL LCR + + S+K +
Sbjct: 61 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120
Query: 253 FGYDI------------------------------KTMNIILNGWCVLGNVYEAKRFWKD 282
F Y I T +I+LNG C G V A+ +
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
++ + P V Y T +N + G+L A F M + KPD +T N +I+ LC +R
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 240
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
I A ++L EM++ G P V T+N+LI + ++E + L EM Q+NG PN +++
Sbjct: 241 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM-QENG-LKPNVVSY 298
Query: 403 NYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
++ + K ++P +L+ M + YN I+ YV D+ E+M+
Sbjct: 299 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 358
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
G+ P +Y ++I GL ++ ++ +A + + ++P+
Sbjct: 359 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 399
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 162/376 (43%), Gaps = 10/376 (2%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D EA + + G P + +N +L L RA R E + DEM + + TY
Sbjct: 65 DLEAGFRLRDQMVCHG-LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 123
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
IL + + + + +F + + G LL LC+ V +AE +S N
Sbjct: 124 SILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 183
Query: 252 EFGYDIKTM-NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ + N ++NG+C G + A + + +PD +TY +N L K ++
Sbjct: 184 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 243
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L M + G P V T N +IDA ++ + VL EM+ G PNV +Y S++
Sbjct: 244 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 303
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--KKPEEVPWVL-ERMERNGC 427
CK ++ LD+M K+ LPN +N ++ + P + ++L E+M+ NG
Sbjct: 304 AFCKNGKIPEAVAILDDMFHKD--VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 361
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
S TYN+++K N + + + PD SY +I +G ++ AL
Sbjct: 362 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 421
Query: 488 YFHEMRLKGMVPEPRT 503
M G+ RT
Sbjct: 422 LQQRMHKYGIKSTVRT 437
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 160/380 (42%), Gaps = 49/380 (12%)
Query: 91 AINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRY--RFDWEAAY-TFFKWVS 147
+I + + K VS E+ ++L L T + +IN Y + E A+ TF + S
Sbjct: 159 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 218
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-LVNE--KTYGILLNRYAAAHMV 204
R P +NA+++ L +A R + EM D VN +T+ L++ Y +
Sbjct: 219 RH--IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 276
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
E+ V +E G ++ ++ + I+
Sbjct: 277 EKCFIVLSEMQENGLKPNVVSYGS----------------------------------IV 302
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N +C G + EA D+ P++ Y ++A + G A L + M G
Sbjct: 303 NAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 362
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P +VT N +I LC + +I EA E++ + N +P+ +YN+LI C ++
Sbjct: 363 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA--- 419
Query: 385 LDEMEQKNGSCLPNEI-TFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
LD ++ + + + + T++ L+ L + E+ ++ ++M +N S +N++++
Sbjct: 420 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 479
Query: 441 YVNWDCEDKVRHTWEEMEKK 460
Y + E K +EM +K
Sbjct: 480 YSKYGNEIKAEDLRKEMLQK 499
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 18/260 (6%)
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
N F Y N+++ G G +A + ++ + P+ +TY T ++ K G L
Sbjct: 14 NAFSY-----NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEA 68
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
RL M G KP+ +T N ++ LC R+ E +L EM ++ +P+ TY+ L
Sbjct: 69 GFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFD 128
Query: 371 HLCK---IKRMETVY-EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERME 423
L + K M +++ +YL KNG + + T + LL L K +V VL+ +
Sbjct: 129 GLSRNGDSKAMLSLFGKYL-----KNGVTI-GDYTCSILLNGLCKDGKVSIAEEVLQSLV 182
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G + YN ++ Y + T+ +M+ + + PD +Y +I+GL R+
Sbjct: 183 NAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERIT 242
Query: 484 DALSYFHEMRLKGMVPEPRT 503
+A EM+ G+ P T
Sbjct: 243 NAQDLLMEMQDNGVNPTVET 262
>gi|22325737|ref|NP_671862.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546776|sp|Q84VG6.2|PP160_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g17525, mitochondrial; Flags: Precursor
gi|330251547|gb|AEC06641.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 626
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 181/382 (47%), Gaps = 17/382 (4%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
+DD IV +I + A F+W S + + + A+ L RRF + Q+ D
Sbjct: 42 SDDHIVRLILDQK-SASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLD 100
Query: 181 EMPDLV----NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY 236
EMPD + ++ + ++ + A +++ I V D +FG L F ++L L +
Sbjct: 101 EMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK- 159
Query: 237 KHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ +++A FF + G D+ T I++ G + + + + + + S P++V
Sbjct: 160 EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVV 219
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y T ++AL K GK+G A L M ++P+ VT N +I A C ++++ +++ +L +
Sbjct: 220 YNTLLHALCKNGKVGRARSLMSEM----KEPNDVTFNILISAYCNEQKLIQSMVLLEKCF 275
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKK 411
+ G +P+V T +++ LC R+ E L+ +E K G + + N L+K +L K
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKV--DVVACNTLVKGYCALGK 333
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
MER G + +TYN+++ Y + D T+ +M+ + + ++
Sbjct: 334 MRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNT 393
Query: 472 MIHGLYDKGRLEDALSYFHEMR 493
+I GL GR +D L M+
Sbjct: 394 LIRGLSIGGRTDDGLKILEMMQ 415
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 168/402 (41%), Gaps = 56/402 (13%)
Query: 146 VSREGDYSPGSNVFNAILDVL------GRARRFVELIQVFDEMPDLVNEKTYGILLNRYA 199
+ + +P + V+N +L L GRAR + EM + N+ T+ IL++ Y
Sbjct: 207 IMKTSGVAPNAVVYNTLLHALCKNGKVGRAR------SLMSEMKE-PNDVTFNILISAYC 259
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG-YDIK 258
+ +++ + ++ G + D+ ++ LC V A E +++ G D+
Sbjct: 260 NEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVV 319
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
N ++ G+C LG + A+RF+ ++ + P+ TY + G L +AL F M
Sbjct: 320 ACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDM 379
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL--PNVTTYNSLIKHLCKIK 376
+ + T N +I L R + L++L M++ + + YN +I K
Sbjct: 380 KTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKEN 439
Query: 377 RMETVYEYLDEME-----------------QKNG--------------SCLPNEITFNYL 405
R E E+L +ME +K G +P+ I + L
Sbjct: 440 RWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCL 499
Query: 406 LKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW---EEMEK 459
+ K EE ++ M G + T+N ++ + + +DKV + E+M +
Sbjct: 500 IHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVI---IGFCKQDKVMNGIKFVEDMAE 556
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+G PD SY ++ L KG ++ A F M K +VP+P
Sbjct: 557 RGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDP 598
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 158/402 (39%), Gaps = 68/402 (16%)
Query: 154 PGSNVFNAILDVLGR-----ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAI 208
P VFN+ILDVL + AR F + + V TYGIL+ + + + +
Sbjct: 145 PSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDV--YTYGILMKGLSLTNRIGDGF 202
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
+ K G + + LL LC+ V A + K D+ T NI+++ +C
Sbjct: 203 KLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEP--NDV-TFNILISAYC 259
Query: 269 VLGNVYEAKRFWKDIIKSKC-----EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
E K ++ KC PD VT + L +G++ AL + + + KG
Sbjct: 260 -----NEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGG 314
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN----------------- 366
K DVV CN ++ C ++ A EM+ +G LPNV TYN
Sbjct: 315 KVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALD 374
Query: 367 ------------------SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+LI+ L R + + L+ M+ + +N ++
Sbjct: 375 TFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYG 434
Query: 409 LKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE----DKVRHTWEEMEKKG 461
K E+ L +ME+ + ++ +I CE D ++ +++M +G
Sbjct: 435 FYKENRWEDALEFLLKMEKLFPRAVDRSFKLISL------CEKGGMDDLKTAYDQMIGEG 488
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
P +IH G++E++L ++M +G +P T
Sbjct: 489 GVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSST 530
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L C G + + K + +I P + ++ ++ GK+ +L L M +G
Sbjct: 465 LISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGY 524
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P T N +I C + ++ ++ + +M RGC+P+ +YN L++ LC ++ +
Sbjct: 525 LPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWL 584
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
M +K S +P+ ++ L+ L + +
Sbjct: 585 LFSRMVEK--SIVPDPSMWSSLMFCLSQKTAI 614
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 174/375 (46%), Gaps = 16/375 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY+ V + G Y P + FN ++ L + E + + D M PD+V TY
Sbjct: 132 AYSVLGKVMKLG-YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV---TYN 187
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKN 251
++N + A+ + + +E D+ + ++ LCR ++ A + F E E
Sbjct: 188 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 247
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N ++ G C G + KD++ + P+ +T+ ++ K+GKL A
Sbjct: 248 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 307
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L++ M +G P+++T N ++D C + R+ EA +L M C P++ T+ SLIK
Sbjct: 308 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 367
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCK 428
C +KR++ + + ++ + N +T++ L++ + ++ + + M +G
Sbjct: 368 YCMVKRVDDGMKVFRNISKRG--LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 425
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TY ++L + +K +E+++K M YT +I G+ G++EDA +
Sbjct: 426 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 485
Query: 489 FHEMRLKGMVPEPRT 503
F + KG+ P T
Sbjct: 486 FCSLPCKGVKPNVMT 500
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 43/300 (14%)
Query: 252 EFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ GY D T N ++ G + G V EA ++++ C+PD VTY + VN + + G
Sbjct: 141 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 200
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL L + M E+ K DV T + IID+LC I A+ + +EM+ +G +V TYNSL+
Sbjct: 201 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 260
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK------------------ 411
+ LCK + L +M + +PN ITFN LL K
Sbjct: 261 RGLCKAGKWNDGALLLKDMVSRE--IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 318
Query: 412 --PEEVPW------------------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
P + + +L+ M RN C T+ ++K Y D
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 378
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
+ + K+G+ + +Y++++ G G+++ A F EM G++P+ T GIL++ +
Sbjct: 379 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 438
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 130/269 (48%), Gaps = 14/269 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N ++D R E + D M PD+V T+ L+ Y V++
Sbjct: 320 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV---TFTSLIKGYCMVKRVDD 376
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
+ VF + G + + + L+ C+ +++AE F+ E G D+ T I+L
Sbjct: 377 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ-EMVSHGVLPDVMTYGILL 435
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G C G + +A ++D+ KSK + V Y T + + K GK+ A LF ++ KG K
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 495
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+V+T +I LC K + EA +LR+M+ G PN TYN+LI+ + + +
Sbjct: 496 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 555
Query: 385 LDEMEQKNGSCLPNEI--TFNYLLKSLKK 411
++EM+ S + I + LL ++K+
Sbjct: 556 IEEMKSCGFSADASSIKMVIDMLLSAMKR 584
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 8/257 (3%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A ++++I+S+ P V ++ F +A+ + + L + + G ++ T N +I
Sbjct: 61 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 120
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C + A VL ++ G P+ TT+N+LIK L ++ +D M + NG
Sbjct: 121 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-NG- 178
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
C P+ +T+N ++ + + + L+ +ME K TY+ I+ C D
Sbjct: 179 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 238
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
++EME KG+ +Y ++ GL G+ D +M + +VP T ++ D+
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298
Query: 512 I---KLKERGEQGKKVI 525
+ KL+E E K++I
Sbjct: 299 VKEGKLQEANELYKEMI 315
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 128/299 (42%), Gaps = 41/299 (13%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNII 263
++AI +F L L F + R K + F + E N ++I T+NI+
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N +C +C Y+ LG ++L G
Sbjct: 120 INCFC------------------RCCKTCFAYSV----------LGKVMKL-------GY 144
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+PD T N +I L + ++ EA+ ++ M GC P+V TYNS++ +C+ +
Sbjct: 145 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 204
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
L +ME++N + T++ ++ SL + + + + ME G K S TYN +++
Sbjct: 205 LLRKMEERNVK--ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 262
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ ++M + + P+ ++ V++ +G+L++A + EM +G+ P
Sbjct: 263 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 321
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 5/235 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP F +++ +R + ++VF + + N TY IL+ + + ++ A
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 414
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWC 268
+F G L D+ + LL LC +E A FE +K++ I I+ G C
Sbjct: 415 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 474
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G V +A + + +P+ +TY ++ L KKG L A L + M E G P+
Sbjct: 475 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 534
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH-LCKIKRMETVY 382
T N +I A + + +++ EMK+ G + ++ +I L +KR+ Y
Sbjct: 535 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRY 589
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 39/94 (41%), Gaps = 22/94 (23%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M GRK VVT A E+ +EM RG PN TY+SLI CK R
Sbjct: 706 MRRPGRKMTVVT----------------AEELHKEMIQRGIAPNTITYSSLIDGFCKENR 749
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
++ + LD M K S YLL L +
Sbjct: 750 LDEANQMLDLMVTKGDS------DIRYLLAGLMR 777
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 184/403 (45%), Gaps = 47/403 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A + ++R G P + ++ ++ L E + +EM + + T+ ++
Sbjct: 178 ALALLRGMARHG-CVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVV 236
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
V EA + DR G + + + LL LCR + + A
Sbjct: 237 RGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE---L 293
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
++ N ++ G G + EA ++ + C+PD+ TY+ ++ L K G++G+A+RL
Sbjct: 294 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 353
Query: 316 QAMWEKGRKPDVVT--------C---------------------------NCIIDALCFK 340
+ M +KG P+VVT C N +I ALC
Sbjct: 354 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 413
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
R+ EA+ +++EM+++GC P++ +YN++I HLC ++ME + + ++ + N I
Sbjct: 414 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG--VVANGI 471
Query: 401 TFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T+N ++ +L + ++ + + M +GC + +YN ++K D+ EEM
Sbjct: 472 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 531
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+KG+ P+ SY ++I L + R+ DAL +M +G+ P+
Sbjct: 532 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPD 574
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 166 LGRARRFVELIQVF--DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
L RARRF ++ D +P T+G+ +EA+ + G + D
Sbjct: 137 LPRARRFALYRRMVHRDRVPP--TTFTFGVAARALCRLGRADEALALLRGMARHGCVPDA 194
Query: 224 SAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
+Q ++ LC V A T E D+ T + ++ G C LG V EA R
Sbjct: 195 VLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDR 254
Query: 283 IIKSKCEPDSVTYA-------------------------------TFVNALTKKGKLGTA 311
++ C P +TY T + +GKL A
Sbjct: 255 MMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEA 314
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L++ M KG +PD T + ++ LC RI A+ +LREM+ +G PNV TY ++
Sbjct: 315 TELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS 374
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCK 428
CK + L+EM K + N +N ++ +L K +E +++ M GC
Sbjct: 375 FCKNGMWDDTRALLEEMSAKGLTL--NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 432
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+YN I+ N + ++ H +E + ++G+ + +Y +IH L GR +DA+
Sbjct: 433 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 492
Query: 489 FHEMRLKG 496
EM L G
Sbjct: 493 AKEMILHG 500
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 120/274 (43%), Gaps = 32/274 (11%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T + C LG EA + + + C PD+V Y T ++AL +G + A L M
Sbjct: 161 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 220
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
G DV T + ++ +C R+ EA ++ M +GC+P V TY L++ LC++++
Sbjct: 221 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 280
Query: 379 ETVYEYLDEMEQKN--------GSCL---------------------PNEITFNYLLKSL 409
+ L + + N G CL P+ T++ L+ L
Sbjct: 281 DEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 340
Query: 410 KKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K + +L ME+ G + TY ++L + D R EEM KG+ +
Sbjct: 341 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 400
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ Y MI+ L GR+++A+ EMR +G P+
Sbjct: 401 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPD 434
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 119/224 (53%), Gaps = 5/224 (2%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
+N + Y ++ ++EA+G+ + G D+ ++ ++ LC + +E AE
Sbjct: 398 LNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 457
Query: 246 FES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
FE+ E+ I T N I++ G +A R K++I C D V+Y + A+
Sbjct: 458 FENLLEEGVVANGI-TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 516
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K G + +L L + M EKG KP+ V+ N +I LC ++R+ +ALE+ ++M N+G P++
Sbjct: 517 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIV 576
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
TYN+LI LCK+ M L+++ +N P+ IT+N L+
Sbjct: 577 TYNTLINGLCKMGWMHAALNLLEKLHNEN--VHPDIITYNILIS 618
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 12/235 (5%)
Query: 271 GNVYEAKRFW---KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
G + A+RF + + + + P + T+ AL + G+ AL L + M G PD
Sbjct: 135 GGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDA 194
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
V +I ALC + + EA +L EM GC +V T++ +++ +C + R+ +D
Sbjct: 195 VLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDR 254
Query: 388 MEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
M K C+P +T+ +LL+ L ++ +E +L R+ +++ +N ++ +
Sbjct: 255 MMTKG--CMPGVMTYGFLLQGLCRVRQADEARAMLGRVP----ELNVVLFNTVIGGCLAE 308
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +E M KG PD +Y++++HGL GR+ A+ EM KG P
Sbjct: 309 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAP 363
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNVYEAKRF 279
D+ ++ L+ +C+ +V+ + E E E G + NI+++ C V +A
Sbjct: 504 DVVSYNGLIKAMCKDGNVDRSLVLLE-EMAEKGIKPNNVSYNILISELCKERRVRDALEL 562
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K ++ PD VTY T +N L K G + AL L + + + PD++T N +I C
Sbjct: 563 SKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 622
Query: 340 KKRIPEALEVL 350
+ + +A +L
Sbjct: 623 VRLLDDAAMLL 633
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 162/367 (44%), Gaps = 17/367 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R D+SP + +N ++ L + ++V D++ P ++ TY IL+
Sbjct: 181 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVI---TYTILIEATMLE 237
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTM 260
V+EA+ + D G D+ + ++ +C+ V+ A E E D+ +
Sbjct: 238 GGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISY 297
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
NI+L G E ++ + KC+P+ VTY+ + L + GK+ A+ L + M E
Sbjct: 298 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 357
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KG PD + + +I A C + R+ A+E L M + GCLP++ YN+++ LCK + +
Sbjct: 358 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 417
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSL----KKPEEVPWVLERMERNGCKMSTDTYNV 436
E ++ + C PN ++N + +L K + +LE M NG TYN
Sbjct: 418 ALEIFGKLGEV--GCSPNSSSYNTMFSALWSSGDKIRALHMILE-MVSNGIDPDEITYNS 474
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ DK +M P +Y +++ G R+EDA+ M G
Sbjct: 475 MISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNG 534
Query: 497 MVPEPRT 503
P T
Sbjct: 535 CRPNETT 541
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 164/367 (44%), Gaps = 49/367 (13%)
Query: 168 RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
+A R +E+++ F + PD+ Y L+N + + +++A V DR + D +
Sbjct: 138 KAVRVMEILEKFGQ-PDVF---AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 193
Query: 228 NLLLWLCRYKHVEVA------------------------ETFFESEKNE----------- 252
++ LC +++A T E +E
Sbjct: 194 IMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSR 253
Query: 253 -FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
D+ T N I+ G C G V A +++ CEPD ++Y + AL +GK
Sbjct: 254 GLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEG 313
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+L M+ + P+VVT + +I LC +I EA+ +L+ MK +G P+ +Y+ LI
Sbjct: 314 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 373
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCK 428
C+ R++ E+L+ M + CLP+ + +N +L +L K + LE ++ GC
Sbjct: 374 FCREGRLDVAIEFLETM--ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 431
Query: 429 MSTDTYNVILKLYVNWDCEDKVR--HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
++ +YN + W DK+R H EM G+ PD+ +Y MI L +G ++ A
Sbjct: 432 PNSSSYNTMFSAL--WSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAF 489
Query: 487 SYFHEMR 493
+MR
Sbjct: 490 ELLVDMR 496
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 132/248 (53%), Gaps = 5/248 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ N ++NG+C + + +A R + PD+VTY + +L +GKL AL++
Sbjct: 153 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 212
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ +P V+T +I+A + + EAL++L EM +RG P++ TYN++I+ +CK
Sbjct: 213 DQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKE 272
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
++ +E + +E K C P+ I++N LL++L K EE ++ +M C +
Sbjct: 273 GMVDRAFEMIRNLELK--GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY++++ ++ + + M++KG+ PD SY +I +GRL+ A+ + M
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390
Query: 493 RLKGMVPE 500
G +P+
Sbjct: 391 ISDGCLPD 398
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 126/259 (48%), Gaps = 22/259 (8%)
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
GY D+ ++ G+ L NV +A R +I++ +PD Y +N K ++ A
Sbjct: 115 GYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDA 173
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
R+ M K PD VT N +I +LC + ++ AL+VL ++ + C P V TY LI+
Sbjct: 174 TRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEA 233
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCK 428
++ + LDEM + P+ T+N +++ + K V E +E GC+
Sbjct: 234 TMLEGGVDEALKLLDEMLSRGLK--PDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCE 291
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-------KGMGPDQRSYTVMIHGLYDKGR 481
+YN++L+ +N + WEE EK + P+ +Y+++I L G+
Sbjct: 292 PDVISYNILLRALLN-------QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 344
Query: 482 LEDALSYFHEMRLKGMVPE 500
+E+A++ M+ KG+ P+
Sbjct: 345 IEEAMNLLKLMKEKGLTPD 363
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 12/222 (5%)
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
+ G +L L + M KG PDV+ C +I + +P+A+ V+ ++ G P+V
Sbjct: 97 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVF 155
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLE 420
YN+LI CK+ R++ LD M K+ S P+ +T+N ++ SL K + VL+
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFS--PDTVTYNIMIGSLCSRGKLDLALKVLD 213
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
++ + C+ + TY ++++ + D+ +EM +G+ PD +Y +I G+ +G
Sbjct: 214 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 273
Query: 481 RLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
++ A + LKG P+ V NI L+ QGK
Sbjct: 274 MVDRAFEMIRNLELKGCEPD------VISYNILLRALLNQGK 309
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 6/242 (2%)
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ G+ M I + C GN E+ + +++ PD + +
Sbjct: 75 QQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLR 134
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ A+R+ + + EK +PDV N +I+ C RI +A VL M+++ P+ TYN
Sbjct: 135 NVPKAVRVME-ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 193
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERME 423
+I LC +++ + LD++ N C P IT+ L+++ +E +L+ M
Sbjct: 194 IMIGSLCSRGKLDLALKVLDQLLSDN--CQPTVITYTILIEATMLEGGVDEALKLLDEML 251
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G K TYN I++ D+ +E KG PD SY +++ L ++G+ E
Sbjct: 252 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWE 311
Query: 484 DA 485
+
Sbjct: 312 EG 313
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 37/234 (15%)
Query: 175 LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
+ ++F E D N TY IL+ +EEA+ + KE G D ++ L+ C
Sbjct: 317 MTKMFSEKCD-PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 375
Query: 235 RYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
R ++VA F E+ ++ DI N +L C G +A + + + C P+S
Sbjct: 376 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 435
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC--------------- 338
+Y T +AL G AL + M G PD +T N +I LC
Sbjct: 436 SYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDM 495
Query: 339 ------------------FKK--RIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
F K RI +A++VL M GC PN TTY LI+ +
Sbjct: 496 RSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 31/229 (13%)
Query: 107 GEIEKALNQCELT----LTDD------LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
G+IE+A+N +L LT D LI R D A F + + +G P
Sbjct: 343 GKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD--VAIEFLETMISDGCL-PDI 399
Query: 157 NVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILL-------NRYAAAHMVEE 206
+N +L L G+A + +E+ E+ N +Y + ++ A HM+ E
Sbjct: 400 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 459
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
+ G D + +++ LCR V+ A E + EF + T NI+L
Sbjct: 460 MV-------SNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLL 512
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
G+C + +A ++ + C P+ TY + + G A+ L
Sbjct: 513 GFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 561
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 163/350 (46%), Gaps = 7/350 (2%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+G R ++L++ D N + Y +++ +V EA G+F G D+
Sbjct: 425 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 484
Query: 226 FQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ C ++ A E D++T I+++ G V EAK ++
Sbjct: 485 YSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVML 544
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K+ +PD TY T +N ++ A +F AM G PDV T +I+ C K +
Sbjct: 545 KACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVD 604
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EAL + +EM + +P+ TY+SL+ LCK R+ V++ +DEM + + IT+N
Sbjct: 605 EALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPA--DVITYNS 662
Query: 405 LLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ L K ++ + +M+ G + +T T+ ++L + ++++ KG
Sbjct: 663 LIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 722
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
D Y VMI+G +G LE+AL+ +M G +P T I++N +
Sbjct: 723 YHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINAL 772
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 10/317 (3%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD--DLSAFQNLLLWLCRYKHVEVAE 243
+N+ +Y L+N AI + RK G L ++ + ++ LC+Y+ V A
Sbjct: 410 LNQVSYATLINGVCKIGDTRGAIKLL--RKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 467
Query: 244 TFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
F E D+ T + ++ G+C++G + EA +++ PD TY V+AL
Sbjct: 468 GLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDAL 527
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K+GK+ A + M + KPDV T N +++ + +A V M G P+V
Sbjct: 528 GKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDV 587
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV---L 419
TY LI CK K ++ EM QKN +P+ +T++ L+ L K + +V +
Sbjct: 588 HTYTILINGFCKSKMVDEALNLFKEMHQKN--MVPDTVTYSSLVDGLCKSGRISYVWDLI 645
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+ M G TYN ++ DK + +M+ +G+ P+ ++T+++ GL
Sbjct: 646 DEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKG 705
Query: 480 GRLEDALSYFHEMRLKG 496
GRL+DA F ++ KG
Sbjct: 706 GRLKDAQEVFQDLLTKG 722
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 177/379 (46%), Gaps = 15/379 (3%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-----PDLVNE 188
++ + A F +S G +P + +N +++ + +R + + +F EM P ++
Sbjct: 252 YEVKKAQHVFNAMSLMG-VTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQ- 309
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFE 247
+ +L+ +A A+ + R + G DL L+ C + +
Sbjct: 310 --FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAK 367
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
K + T+N ++ G C+ G V +A F ++ + + V+YAT +N + K G
Sbjct: 368 ILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGD 427
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
A++L + + + KP+V + IIDALC + + EA + EM +G +V TY++
Sbjct: 428 TRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYST 487
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMER 424
LI C + +++ L+EM K + P+ T+ L+ +L K +E VL M +
Sbjct: 488 LIYGFCIVGKLKEAIGLLNEMVLKTIN--PDVRTYTILVDALGKEGKVKEAKSVLAVMLK 545
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
K TYN ++ Y+ K +H + M G+ PD +YT++I+G +++
Sbjct: 546 ACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDE 605
Query: 485 ALSYFHEMRLKGMVPEPRT 503
AL+ F EM K MVP+ T
Sbjct: 606 ALNLFKEMHQKNMVPDTVT 624
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 125/251 (49%), Gaps = 7/251 (2%)
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
GY D T+N ++ G C+ G V EA F ++ + + V+YAT +N + + G A
Sbjct: 58 GYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAA 117
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++ + + + KP+V N IIDALC + + EA + EM +G NV TY++LI
Sbjct: 118 IKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYG 177
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
C + +++ L+ M K + PN T+N L+ +L K +E VL M + K
Sbjct: 178 FCIVGKLKEALGLLNVMVLKTIN--PNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVK 235
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+ TY+ ++ Y K +H + M G+ PD SY +MI+G R++ AL+
Sbjct: 236 SNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNL 295
Query: 489 FHEMRLKGMVP 499
F EM L P
Sbjct: 296 FKEMILSRFPP 306
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 162/348 (46%), Gaps = 17/348 (4%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
I++ + +Y+ EA Y F ++ +G S ++ ++ + E I + +EM
Sbjct: 453 IIDALCKYQLVSEA-YGLFSEMTVKG-ISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVL 510
Query: 183 ----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL-LWLCRYK 237
PD+ +TY IL++ V+EA V + D+ + L+ +L Y+
Sbjct: 511 KTINPDV---RTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYE 567
Query: 238 HVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
+ F D+ T I++NG+C V EA +K++ + PD+VTY++
Sbjct: 568 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSS 627
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
V+ L K G++ L M ++G+ DV+T N +ID LC + +A+ + +MK++G
Sbjct: 628 LVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQG 687
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC---LPNEITFNYLLKSLKKPEE 414
PN T+ L+ LCK R++ E ++ K + N + + + + L EE
Sbjct: 688 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLL--EE 745
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+L +ME NGC + T+++I+ D DK +M +G+
Sbjct: 746 ALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/489 (21%), Positives = 217/489 (44%), Gaps = 66/489 (13%)
Query: 85 YPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRF--------DW 136
YP D + +N ++K + KG++++AL+ + L +N ++ D
Sbjct: 59 YPPDTVTLN--TLIK--GLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDT 114
Query: 137 EAAYTFFKWVSREGDYS-PGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYG 192
AA F + + +G + P ++N I+D L + + E +F EM N TY
Sbjct: 115 RAAIKFLRKI--DGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYS 172
Query: 193 ILLNRYAAAHMVEEAIGVF-------------------DRRKEFGELDDLSAFQNLLLWL 233
L+ + ++EA+G+ D + G++ + + ++L
Sbjct: 173 TLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKA 232
Query: 234 CRYKHVEVAETF-------FESEKNEFGY----------DIKTMNIILNGWCVLGNVYEA 276
C +V T +E +K + + D+ + NI++NG+C + V +A
Sbjct: 233 CVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKA 292
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
+K++I S+ P + + +++ K TA+ L + KG +PD+ T N +I+
Sbjct: 293 LNLFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINC 351
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
C +I VL ++ RG P+ T N+LIK LC +++ + D++ +
Sbjct: 352 FCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL- 410
Query: 397 PNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
N++++ L+ + K + +L +++ K + + Y+ I+ + +
Sbjct: 411 -NQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGL 469
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
+ EM KG+ D +Y+ +I+G G+L++A+ +EM LK + P+ RT ++ D
Sbjct: 470 FSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVD---- 525
Query: 514 LKERGEQGK 522
G++GK
Sbjct: 526 --ALGKEGK 532
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 113/242 (46%), Gaps = 13/242 (5%)
Query: 127 NVINRYRFDWEA--AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
++N Y +E A F +S G +P + + +++ +++ E + +F EM
Sbjct: 557 TLMNGYLLVYEVKKAQHVFNAMSLMG-VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQ 615
Query: 183 ----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
PD V TY L++ + + + D ++ G+ D+ + +L+ LC+ H
Sbjct: 616 KNMVPDTV---TYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGH 672
Query: 239 VEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
++ A F K++ + T I+L+G C G + +A+ ++D++ D Y
Sbjct: 673 LDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNV 732
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+ K+G L AL + M E G P+ VT + II+AL K +A ++LR+M RG
Sbjct: 733 MIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARG 792
Query: 358 CL 359
L
Sbjct: 793 LL 794
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 36/287 (12%)
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK---NEFGYDIKTMNIILNGWCVLGN 272
FG ++ L+ C ++ E +K F D+ T ++NG C +GN
Sbjct: 89 SFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGN 148
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
A R +++ C+P+ Y T +++L K ++ A LF M KG PD+ T N
Sbjct: 149 TSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNS 208
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+I ALC +L EM + +P+V ++N+++ LCK ++ ++ +D+M Q+
Sbjct: 209 LIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR- 267
Query: 393 GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
G C+PN I++N L+ K + + DK +
Sbjct: 268 GGCMPNVISYNTLINGYCKIQRI--------------------------------DKAMY 295
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ EM ++ + PD +Y+ +IHGL RL+DA++ FHEM +P
Sbjct: 296 LFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 342
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 157/334 (47%), Gaps = 16/334 (4%)
Query: 174 ELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
E + +FD+M PD+V TYG L+N AI + + ++ A+
Sbjct: 116 EALHLFDKMIGEGFRPDVV---TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYN 172
Query: 228 NLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
++ LC+ + V E F E DI T N +++ C L +++ S
Sbjct: 173 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 232
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPE 345
K PD V++ T V+AL K+GK+ A + M ++G P+V++ N +I+ C +RI +
Sbjct: 233 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDK 292
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A+ + EM + +P+ TY++LI LC ++R++ EM S +PN +T+ L
Sbjct: 293 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA--CSQIPNLVTYRIL 350
Query: 406 LKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
L L K E +L+ +E + N+ + + R + + KG+
Sbjct: 351 LDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGL 410
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
PD +Y++MI+GL +G L++A F EM G
Sbjct: 411 QPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 444
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 172/377 (45%), Gaps = 31/377 (8%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHM--VEEAI 208
P + FN +L + + + L+ + +M N T IL+N + + + EA+
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKNEFGYDIKTMNI 262
+FD+ G D+ + L+ LC+ + A S + N F Y N
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY-----NT 173
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
I++ C V EA + +++ PD TY + ++AL + L M +
Sbjct: 174 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 233
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG-CLPNVTTYNSLIKHLCKIKRMETV 381
PDVV+ N ++DALC + ++ EA +V+ +M RG C+PNV +YN+LI CKI+R++
Sbjct: 234 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKA 293
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERM-ERNGCKMSTDTYNVILKL 440
EM ++ +P+ +T++ L+ L E + + E C + V ++
Sbjct: 294 MYLFGEMCRQ--ELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL--VTYRI 349
Query: 441 YVNWDCEDKVRHTWEEM------EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+++ C++ R+ E M E + PD + + I G+ G LE A F +
Sbjct: 350 LLDYLCKN--RYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 407
Query: 495 KGMVPEPRT-GILVNDM 510
KG+ P+ T I++N +
Sbjct: 408 KGLQPDVWTYSIMINGL 424
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 155/340 (45%), Gaps = 20/340 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE-- 205
P +N I+D L + R+ E +F EM PD+ TY L+ +A ++ E
Sbjct: 166 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIF---TYNSLI--HALCNLCEWK 220
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNII 263
+ + + + D+ +F ++ LC+ V A + G ++ + N +
Sbjct: 221 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTL 280
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+NG+C + + +A + ++ + + PD+VTY+T ++ L +L A+ LF M +
Sbjct: 281 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 340
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P++VT ++D LC + + EA+ +L+ ++ P++ N I +C+ +E +
Sbjct: 341 IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 400
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
+ K P+ T++ ++ L + +E + M+ NGC ++ YN I +
Sbjct: 401 LFSNLSSKGLQ--PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRG 458
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
++ + + +EM +G D + T+ + L D G
Sbjct: 459 FLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 498
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 159/385 (41%), Gaps = 18/385 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
EA + F K + EG + P + +++ L + I++ M N Y
Sbjct: 116 EALHLFDKMIG-EG-FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 173
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL---LLWLCRYKHVEVAETFFESEK 250
+++ V EA +F G D+ + +L L LC +KHV A E
Sbjct: 174 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHV--ATLLNEMVD 231
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII-KSKCEPDSVTYATFVNALTKKGKLG 309
++ D+ + N +++ C G V EA +I + C P+ ++Y T +N K ++
Sbjct: 232 SKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRID 291
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+ LF M + PD VT + +I LC +R+ +A+ + EM +PN+ TY L+
Sbjct: 292 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 351
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL-LKSLKKPEEVPW---VLERMERN 425
+LCK + + L +E GS L +I N + + + + E+ + +
Sbjct: 352 DYLCKNRYLAEAMALLKAIE---GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 408
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G + TY++++ D+ + EM++ G + Y + G A
Sbjct: 409 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 468
Query: 486 LSYFHEMRLKGMVPEPRTGILVNDM 510
+ EM +G + T L M
Sbjct: 469 IQLLQEMVARGFSADASTMTLFVKM 493
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 127/292 (43%), Gaps = 8/292 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD----LVNEKTYGILLNRYAAAHMVEEAIG 209
P FN ++D L + + E V D+M + N +Y L+N Y +++A+
Sbjct: 236 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMY 295
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWC 268
+F + D + L+ LC + ++ A F E ++ T I+L+ C
Sbjct: 296 LFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC 355
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+ EA K I S +PD ++ + + G+L A LF + KG +PDV
Sbjct: 356 KNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVW 415
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T + +I+ LC + + EA ++ REM GC N YN++ + + + L EM
Sbjct: 416 TYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 475
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
+ S + +T L + + + L+++ R+ CK + Y ++ L
Sbjct: 476 VARGFSADASTMT---LFVKMLSDDGLDQSLKQILRDFCKQKSWIYENVMVL 524
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 173/372 (46%), Gaps = 44/372 (11%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D + A + + +G +P + +N ++ L +A + +++FDEMP+ + N TY
Sbjct: 167 DLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITY 226
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
++ D + G+L+ S F+ LW +H
Sbjct: 227 NTMI----------------DGHIKKGDLE--SGFR---LWSQMLRH------------- 252
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
++ T N++L+G C G + E ++ K PD TY+ + ++ G T
Sbjct: 253 GLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTM 312
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L LF+ +KG K TC+ +++ LC +I +A EVL+ + N G L YN+LI
Sbjct: 313 LSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLING 372
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP----WVLERMERNGC 427
C+I +E + +M+ + P+ IT+N L+ L K E + V+E ME+NG
Sbjct: 373 YCQIGDLEGAFSIFQQMKSR--LIRPDHITYNALINGLGKVERITEAHDLVIE-MEKNGV 429
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
S +T+N ++ Y +K +M++KG+ P+ SY +++ G++ +A++
Sbjct: 430 NPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVA 489
Query: 488 YFHEMRLKGMVP 499
+M +K ++P
Sbjct: 490 ILDDMFIKDVLP 501
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 164/376 (43%), Gaps = 10/376 (2%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D E+ + + + R G P +N +L L RA R E V DEM + + TY
Sbjct: 238 DLESGFRLWSQMLRHG-LKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTY 296
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
IL + ++ + + +F+ + G LL LC+ + AE ++ N
Sbjct: 297 SILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVN 356
Query: 252 EFGYDIKTM-NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ N ++NG+C +G++ A ++ + PD +TY +N L K ++
Sbjct: 357 SGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITE 416
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L M + G P V T N +IDA ++ + +L +M+ +G PNV +Y S++
Sbjct: 417 AHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVN 476
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGC 427
CK ++ LD+M K+ LP +N ++ + ++ + E+M+ +G
Sbjct: 477 AFCKNGKILEAVAILDDMFIKD--VLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGV 534
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
S TYN+++K + + + G+ PD SY +I + + AL
Sbjct: 535 PPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALE 594
Query: 488 YFHEMRLKGMVPEPRT 503
EM G+ P PRT
Sbjct: 595 LEKEMWKCGIKPSPRT 610
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 12/257 (4%)
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
N F Y N+++ G G +A + + ++ + P+ +TY T ++ KKG L +
Sbjct: 187 NAFSY-----NVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLES 241
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
RL+ M G KP+V+T N ++ LC R+ E VL EM +R +P+ TY+ L
Sbjct: 242 GFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFD 301
Query: 371 HLCKIKRMETVYEYLDEMEQKNG--SCLPNEITFNYLLKS--LKKPEEVPWVLERMERNG 426
+ +T+ +E +K I N L K + K EE VL+ + +G
Sbjct: 302 GHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEE---VLQTLVNSG 358
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+T YN ++ Y + +++M+ + + PD +Y +I+GL R+ +A
Sbjct: 359 LLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAH 418
Query: 487 SYFHEMRLKGMVPEPRT 503
EM G+ P T
Sbjct: 419 DLVIEMEKNGVNPSVET 435
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 155/381 (40%), Gaps = 45/381 (11%)
Query: 91 AINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRY--RFDWEAAYTFFKWVSR 148
+I + + K +S E+ + L L T + +IN Y D E A++ F+ + +
Sbjct: 332 SILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM-K 390
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-PDLVNE--KTYGILLNRYAAAHMVE 205
P +NA+++ LG+ R E + EM + VN +T+ L++ Y A +E
Sbjct: 391 SRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLE 450
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILN 265
+ + +E G ++ ++ + I+N
Sbjct: 451 KCFIILSDMQEKGLKPNVVSYGS----------------------------------IVN 476
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+C G + EA D+ P + Y ++A + G A L + M G P
Sbjct: 477 AFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPP 536
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+VT N +I LC + +I EA E+L ++N G P+V +YN+LI C + E
Sbjct: 537 SIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELE 596
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
EM + P+ T+ L SL + E+ + ++M + YN+++ Y
Sbjct: 597 KEMWKCG--IKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYA 654
Query: 443 NWDCEDKVRHTWEEMEKKGMG 463
E KV +EM KG+
Sbjct: 655 KCGEESKVEALRKEMSDKGIA 675
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 14/253 (5%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDI-IKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D T N + V G++ EA + + P++ +Y + L K G A++L
Sbjct: 151 DTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKL 210
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M EK P+ +T N +ID K + + +M G PNV TYN L+ LC+
Sbjct: 211 FDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCR 270
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME---RNGCKMST 431
RM LDEM + +P+ T++ L + + +L E + G K+
Sbjct: 271 AGRMGETAAVLDEMASRK--MVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGA 328
Query: 432 DTYNVILKLYVNWDCED----KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
T +++L N C+D K + + G+ Y +I+G G LE A S
Sbjct: 329 YTCSILL----NGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFS 384
Query: 488 YFHEMRLKGMVPE 500
F +M+ + + P+
Sbjct: 385 IFQQMKSRLIRPD 397
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 165/361 (45%), Gaps = 15/361 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N+I+ L +A+ + ++V M PD + TY +++ + ++ +E
Sbjct: 120 SPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCM---TYNSIVHGFCSSGQPKE 176
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILN 265
AI + + G D+ + +L+ +LC+ A F+S K +I T +L
Sbjct: 177 AIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQ 236
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ G + E ++++ P+ ++ V A K+ K+ A+ +F M ++G P
Sbjct: 237 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNP 296
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ VT +I LC R+ +A+ +M + G P YNSLI LC + E E +
Sbjct: 297 NAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI 356
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLYV 442
EM + G CL N I FN ++ S K V + + M R G K TY+ ++ Y
Sbjct: 357 LEMLDR-GICL-NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 414
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
D+ M GM PD +Y+ +I+G R++DAL F EM G+ P+
Sbjct: 415 LAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDII 474
Query: 503 T 503
T
Sbjct: 475 T 475
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 148/301 (49%), Gaps = 9/301 (2%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG---YDIKTMN 261
E+A VFD G + D+ ++ LL LC + A ++ G D+ + +
Sbjct: 34 EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++NG+ G++ + + +++ + P+ VTY + + AL K + A+ + M +
Sbjct: 93 TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G PD +T N I+ C + EA+ L++M++ G P+V TYNSL+ +LCK R
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVIL 438
+ D M ++ P T+ LL+ E+ +L+ M RNG + +++++
Sbjct: 213 RKIFDSMTKRGLK--PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 270
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
Y + ++ + +M ++G+ P+ +Y +I L GR+EDA+ YF +M +G+
Sbjct: 271 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 330
Query: 499 P 499
P
Sbjct: 331 P 331
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 123/253 (48%), Gaps = 7/253 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNALTKKGKLGTALR 313
D+ + NI+LNG C EA + C PD V+Y+T +N K+G L
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYS 109
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+ M ++ P+VVT N II ALC + + +A+EVL M G +P+ TYNS++ C
Sbjct: 110 TYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 169
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMS 430
+ + +L +M ++ P+ +T+N L+ L K E + + M + G K
Sbjct: 170 SSGQPKEAIVFLKKM--RSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TY +L+ Y ++ + M + G+ P+ +++++ + ++E+A+ F
Sbjct: 228 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 287
Query: 491 EMRLKGMVPEPRT 503
+MR +G+ P T
Sbjct: 288 KMRQQGLNPNAVT 300
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 180/378 (47%), Gaps = 22/378 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P VF+ ++ + + E + VF +M P+ V TYG ++ + VE+A
Sbjct: 261 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAV---TYGAVIGILCKSGRVEDA 317
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILN 265
+ F++ + G + +L+ LC E AE E + G + T+ N I++
Sbjct: 318 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI-LEMLDRGICLNTIFFNSIID 376
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G V E+++ + +++ +PD +TY+T ++ GK+ A +L +M G KP
Sbjct: 377 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 436
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D VT + +I+ C R+ +AL + REM++ G P++ TYN +++ L + +R E
Sbjct: 437 DCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 496
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC----KMSTDTYNVILKLY 441
+ K+G L T+N +L L K + L RM +N C K+ T+N+++
Sbjct: 497 VGI-TKSGRQLELS-TYNIILHGLCKNKLTDDAL-RMFQNLCLMDLKLEARTFNIMIDAL 553
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ D+ + + G+ P+ +Y +M + +G LE+ F M G +
Sbjct: 554 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD- 612
Query: 502 RTGILVNDMNIKLKERGE 519
+G+L N + +L +RGE
Sbjct: 613 -SGML-NFIVRELLQRGE 628
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 174/407 (42%), Gaps = 16/407 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F K + +G P +N+++D L + R E ++FD M P++ TYG
Sbjct: 177 AIVFLKKMRSDG-VEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEIT---TYG 232
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
LL YA + E G+ D G + F L+ + + VE A F + +
Sbjct: 233 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ 292
Query: 253 -FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T ++ C G V +A +++ +I P ++ Y + ++ L K A
Sbjct: 293 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 352
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L M ++G + + N IID+ C + R+ E+ ++ M G P++ TY++LI
Sbjct: 353 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 412
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCK 428
C +M+ + L M P+ +T++ L+ + + ++ + ME +G
Sbjct: 413 YCLAGKMDEATKLLASMVSVGMK--PDCVTYSTLINGYCKISRMKDALVLFREMESSGVS 470
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TYN+IL+ + + + K G + +Y +++HGL +DAL
Sbjct: 471 PDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRM 530
Query: 489 FHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
F + L + E RT ++ D +K+ E + +S GL N
Sbjct: 531 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 577
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 37/195 (18%)
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG--CLPNVTTYNSL 368
A +F + +G PDV + N +++ LC + R EALE+L M + G C P+V +Y+++
Sbjct: 36 ARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
I K ++ Y +EM + S PN +T+N ++ +L K + V
Sbjct: 95 INGFFKEGDLDKTYSTYNEMLDQRIS--PNVVTYNSIIAALCKAQTV------------- 139
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
DK M K G+ PD +Y ++HG G+ ++A+ +
Sbjct: 140 -------------------DKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVF 180
Query: 489 FHEMRLKGMVPEPRT 503
+MR G+ P+ T
Sbjct: 181 LKKMRSDGVEPDVVT 195
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 113/260 (43%), Gaps = 11/260 (4%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILL 195
F + R G P ++ ++D A + E ++ M PD V TY L+
Sbjct: 390 LFDLMVRIG-VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV---TYSTLI 445
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFG 254
N Y +++A+ +F + G D+ + +L L + + A E + K+
Sbjct: 446 NGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQ 505
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T NIIL+G C +A R ++++ + ++ T+ ++AL K G+ A L
Sbjct: 506 LELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 565
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F A G P+ T + + + + + E ++ M++ GC + N +++ L +
Sbjct: 566 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 625
Query: 375 IKRMETVYEYLDEMEQKNGS 394
+ YL +++K+ S
Sbjct: 626 RGEITRAGTYLSMIDEKHFS 645
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 190/425 (44%), Gaps = 79/425 (18%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----------PDLVNEKTYGILLNR 197
R+ SP FNA + L + + +E ++F +M P+++ TY ++L
Sbjct: 153 RKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNII---TYNLMLGG 209
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD- 256
+ M+EEA +F++ K L + ++ LL L R + A+ + E + G +
Sbjct: 210 FCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLK-EMVDMGMEP 268
Query: 257 -IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN--------------- 300
+ + NI+++G C G +++A+ + + S PD+VTY T ++
Sbjct: 269 NVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVL 328
Query: 301 --------------------ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+L K+G++ A L Q M EKG D VTCN +ID LC
Sbjct: 329 REMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNN 388
Query: 341 KRIPEALEVLREMKNRG-----------------------CLPNVTTYNSLIKHLCKIKR 377
++ +A+E++ M G C+P++ +Y+++I LCK R
Sbjct: 389 GKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGR 448
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTY 434
+ + EM KN P+ ++ + S K ++ VL+ ME+ GC + TY
Sbjct: 449 VGEAKKKFIEMMGKN--LQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTY 506
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N ++ + + ++ +EM ++G+ PD Y ++ L + GR++DA S EM
Sbjct: 507 NSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQ 566
Query: 495 KGMVP 499
KG+ P
Sbjct: 567 KGISP 571
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 171/418 (40%), Gaps = 73/418 (17%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
SP + FN ++ +L + + ++FD+MP+ NE ++GIL+ Y A + +
Sbjct: 53 SPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLE 112
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWC 268
+ + G + + L+ C+ + AE E K+ D+ T N ++ C
Sbjct: 113 LLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALC 172
Query: 269 VLGNVYEAKRFWKDI----IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM------ 318
G V EA R ++D+ + +P+ +TY + K+G L A LF+ M
Sbjct: 173 SSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENL 232
Query: 319 --------W---------------------EKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
W + G +P+V + N ++D LC + +A +
Sbjct: 233 MNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARML 292
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+R M + G LP+ TY +L+ C ++ L EM + C PN T N LL SL
Sbjct: 293 MRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRD--GCSPNNYTCNILLYSL 350
Query: 410 KKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK----VRHTW-------- 454
K E +L++M G + T T N+++ N DK V W
Sbjct: 351 WKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALG 410
Query: 455 ------------EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ KK M PD SY+ +I GL GR+ +A F EM K + P+
Sbjct: 411 NLGNSYIGLVDDSDSRKKCM-PDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPD 467
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 139/284 (48%), Gaps = 13/284 (4%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ + + I++G C G V EAK+ + +++ +PDS Y F+++ K+GK+ +A R+
Sbjct: 432 DLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVL 491
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ M +KG + T N +I L K +I E ++ EM+ RG P+V+ YN+++ LC+
Sbjct: 492 KDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEG 551
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME--RNGCKMSTDT 433
R++ LDEM QK S PN +F+ L+K+ K + V E E N C
Sbjct: 552 GRVKDAPSVLDEMLQKGIS--PNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEAL 609
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y++ + K + +E + Y +I L +L+DA H++
Sbjct: 610 YSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLI 669
Query: 494 LKGMVPEPRTGILVNDMNIKLKERG------EQGKKVIKLTSLG 531
KG +P + + V D L +RG E +K++++ S G
Sbjct: 670 DKGYWFDPASFMPVID---GLGKRGNKHEADELAEKMMEMASEG 710
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 20/292 (6%)
Query: 225 AFQNLLLWLCRYKHVEVAETFFE------SEKNEFGYDIKTMNIILNGWCVLGNVYEAKR 278
F L+ LC ++ A F+ E NE+ + I++ G+C G +
Sbjct: 58 TFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSF-----GILVRGYCRAGFTSKGLE 112
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
++ + P+ V Y T +++ K+GK A +L M + G PDVVT N I ALC
Sbjct: 113 LLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALC 172
Query: 339 FKKRIPEALEVLREMKNRGCL----PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
++ EA + R+M+ L PN+ TYN ++ CK +E ++M+
Sbjct: 173 SSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSEN- 231
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
L N ++N L L K E VL+ M G + + +YN+++ R
Sbjct: 232 -LMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDAR 290
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
M G+ PD +YT ++HG G++ +A + EM G P T
Sbjct: 291 MLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYT 342
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 116/283 (40%), Gaps = 40/283 (14%)
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N++L G V KD++ S P++ T+ + L G L A LF M E
Sbjct: 25 NVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPE 84
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KG +P+ + ++ C + LE+L EM+ G PN YN+LI CK + +
Sbjct: 85 KGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDD 144
Query: 381 VYEYLDEMEQ------------------KNGSCL-------------------PNEITFN 403
+ +DEM + +G L PN IT+N
Sbjct: 145 AEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYN 204
Query: 404 YLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
+L K EE + E+M+ + M+ ++YN+ L V + + +EM
Sbjct: 205 LMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDM 264
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
GM P+ SY +++ GL G L DA M G++P+ T
Sbjct: 265 GMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVT 307
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 9/212 (4%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P Y + + TK+G++ L + M G P+ T N +I LC + +A E+
Sbjct: 19 PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+M +GC PN ++ L++ C+ E L EM + S PN++ +N L+ S
Sbjct: 79 FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFS--PNKVVYNTLISSF 136
Query: 410 ---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME-KKGMG-- 463
K ++ +++ M ++G T+N + + + + +M+ + +G
Sbjct: 137 CKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLP 196
Query: 464 -PDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
P+ +Y +M+ G +G LE+A + F +M++
Sbjct: 197 QPNIITYNLMLGGFCKEGMLEEARALFEKMKV 228
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 146/318 (45%), Gaps = 9/318 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY IL++ AH E A+ F + G D +LL C K + A
Sbjct: 79 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHR 138
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK--CEPDSVTYATFVNALTKK 305
E G D+ + NI+L C G +A + + + C PD V Y T ++ K+
Sbjct: 139 TPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKE 198
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G + A LF+ M ++G PD+VT N ++ ALC + + +A LR+M N+ LPN TY
Sbjct: 199 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 258
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
N+LI + + EM + S LP+ +T + L+ SL K +E V + M
Sbjct: 259 NNLIYGYSSTGQWKEAVRVFKEMRRH--SILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 316
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G +YN++L Y C + ++ M G+ PD ++ V I + G L
Sbjct: 317 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGML 376
Query: 483 EDALSYFHEMRLKGMVPE 500
+ A+ F+EMR G+ P+
Sbjct: 377 DKAMIIFNEMRDHGVKPD 394
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 5/243 (2%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D A FK + + G P +N+++ L +AR + +M + L N TY
Sbjct: 200 DVNKACDLFKEMVQRG-IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 258
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
L+ Y++ +EA+ VF + L D+ L+ LC+Y ++ A F++
Sbjct: 259 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM 318
Query: 252 EF-GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ D+ + NI+LNG+ G + + + ++ PD T+ + A G L
Sbjct: 319 KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDK 378
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A+ +F M + G KPDVVT +I ALC ++ +A+E +M ++G P+ YN LI+
Sbjct: 379 AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQ 438
Query: 371 HLC 373
C
Sbjct: 439 GFC 441
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 110/263 (41%), Gaps = 41/263 (15%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V Y +++ + V +A +F + G DL + +++ LC+ + ++ A
Sbjct: 183 PDVV---AYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKA 239
Query: 243 ETFFESEKNE-------------FGY-----------------------DIKTMNIILNG 266
E F N+ +GY D+ T+++++
Sbjct: 240 EAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGS 299
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G + EA+ + + PD +Y +N KG L LF M G PD
Sbjct: 300 LCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 359
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
T N I A + +A+ + EM++ G P+V TY ++I LC+I +M+ E +
Sbjct: 360 FYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN 419
Query: 387 EMEQKNGSCLPNEITFNYLLKSL 409
+M + + P++ +N L++
Sbjct: 420 QMIDQGVA--PDKYAYNCLIQGF 440
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 174/375 (46%), Gaps = 16/375 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY+ V + G Y P + FN +++ L + + + + D M PD+V TY
Sbjct: 142 AYSVLGKVMKLG-YEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMV---TYN 197
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKN 251
++N + A + + +E D+ + ++ LCR ++ A + F E E
Sbjct: 198 SIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N ++ G C G + KD++ + P+ +T+ ++ K+GKL A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L++ M +G P+++T N ++D C + R+ EA +L M C P++ T+ SLIK
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCK 428
C +KR++ + + ++ + N +T++ L++ + ++ + + M +G
Sbjct: 378 YCMVKRVDDGMKVFRNISKR--GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
TY ++L + +K +E+++K M YT +I G+ G++EDA +
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 489 FHEMRLKGMVPEPRT 503
F + KG+ P T
Sbjct: 496 FCSLPCKGVKPNVMT 510
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 138/300 (46%), Gaps = 43/300 (14%)
Query: 252 EFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ GY D T N ++NG C+ G V +A ++++ C+PD VTY + VN + + G
Sbjct: 151 KLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTS 210
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A + + M E+ K DV T + IID+LC I A+ + +EM+ +G +V TYNSL+
Sbjct: 211 LAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK------------------ 411
+ LCK + L +M + +PN ITFN LL K
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSR--EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 412 --PEEVPW------------------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
P + + +L+ M RN C T+ ++K Y D
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
+ + K+G+ + +Y++++ G G+++ A F EM G++P+ T GIL++ +
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 12/246 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N ++D R E + D M PD+V T+ L+ Y V++
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV---TFTSLIKGYCMVKRVDD 386
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
+ VF + G + + + L+ C+ +++AE F+ E G D+ T I+L
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ-EMVSHGVLPDVMTYGILL 445
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G C G + +A ++D+ KSK + V Y T + + K GK+ A LF ++ KG K
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+V+T +I LC K + EA +LR+M+ G PN TYN+LI+ + + +
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 385 LDEMEQ 390
++EM+
Sbjct: 566 IEEMKS 571
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 8/257 (3%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A ++++I+S+ P V ++ F +A+ + + L + + G ++ T N +I
Sbjct: 71 DAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C + A VL ++ G P+ TT+N+LI LC ++ +D M + NG
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVE-NG- 188
Query: 395 CLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
C P+ +T+N ++ + + + +L +ME K TY+ I+ C D
Sbjct: 189 CQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
++EME KG+ +Y ++ GL G+ D +M + +VP T ++ D+
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 512 I---KLKERGEQGKKVI 525
+ KL+E E K++I
Sbjct: 309 VKEGKLQEANELYKEMI 325
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 131/299 (43%), Gaps = 41/299 (13%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNII 263
++AI +F L L F + R K + F + E N ++I T+NI+
Sbjct: 70 DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N +C +C Y+ LG ++L G
Sbjct: 130 INCFC------------------RCCKTCFAYSV----------LGKVMKL-------GY 154
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+PD T N +I+ LC + ++ +A+ ++ M GC P++ TYNS++ +C+ ++
Sbjct: 155 EPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFD 214
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
L +ME++N + T++ ++ SL + + + + ME G K S TYN +++
Sbjct: 215 MLRKMEERNVK--ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ ++M + + P+ ++ V++ +G+L++A + EM +G+ P
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 4/224 (1%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP F +++ +R + ++VF + + N TY IL+ + + ++ A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWC 268
+F G L D+ + LL LC +E A FE +K++ I I+ G C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G V +A + + +P+ +TY ++ L KKG L A L + M E G P+
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
T N +I A + + +++ EMK+ G + ++ +I L
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 166/384 (43%), Gaps = 48/384 (12%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIGVFDRRK 215
F ++ R R + V +M L E T+G LL+ + + + +A +
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVY 274
+ G ++ + L+ LC+ + +A E E EK G D+ T N +L G C G
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A R +D++K PD VT+ ++ K+G L A L++ M + P+ VT N II
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK--- 391
+ LC R+ +A + M ++GC PNV TYN+LI CK + ++ + M +
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 392 ----------NGSC--------------------LPNEITFNYLLKSLKKPEEVPWVL-- 419
+G C P+ IT LL L E+ L
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 420 -ERMERNGCKMSTDTYNVILKLYVNWDCE-DKVRHTWE---EMEKKGMGPDQRSYTVMIH 474
+ M + + YN++ ++ C+ DKV WE + +G+ PD R+YT+MI
Sbjct: 409 FDDMRESEKYIGIVAYNIM----IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 475 GLYDKGRLEDALSYFHEMRLKGMV 498
GL G +A M+ +G++
Sbjct: 465 GLCKNGPRREADELIRRMKEEGII 488
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 135/337 (40%), Gaps = 39/337 (11%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKTMNI 262
E+A +F L + F LL + E +F + +G +D+ + I
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETV-IYFSQKMELYGISHDLYSFTI 111
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++ +C + A ++K EP VT+ + ++ ++G A L M + G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+P+VV N +ID LC + ALE+L EM+ +G +V TYN+L+ LC R
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 383 EYLDEM---------------------------------EQKNGSCLPNEITFNYLLKSL 409
L +M E S PN +T+N ++ L
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 410 ---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
+ + + M GC + TYN ++ + + D+ ++ M +G D
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+Y +IHG G+L AL F M + + P+ T
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 4/250 (1%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIG 209
+P F A++DV + E +++ EM N TY ++N + +A
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWC 268
FD G ++ + L+ C+++ V+ F+ E F DI T N +++G+C
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+G + A + ++ + PD +T+ ++ L G++ +AL F M E + +V
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
N +I LC ++ +A E+ + G P+ TY +I LCK E + M
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Query: 389 EQKNGSCLPN 398
+++ C N
Sbjct: 483 KEEGIICQMN 492
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 37/255 (14%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + +++ S+ P V + + A + T + Q M G D+ + +I
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
C R+ AL VL +M G P++ T+ SL+ C + R+ + + M +
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
PN + +N L+ L K E+ LE +
Sbjct: 174 --PNVVVYNTLIDGLCKNGELNIALELLN------------------------------- 200
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK- 513
EMEKKG+G D +Y ++ GL GR DA +M + + P+ T + D+ +K
Sbjct: 201 -EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ 259
Query: 514 --LKERGEQGKKVIK 526
L E E K++I+
Sbjct: 260 GNLDEAQELYKEMIQ 274
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 6/318 (1%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N TY +L+ Y+ + +EEA +FD + G D+ + +++ W C++ +++ A F
Sbjct: 261 NVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLF 320
Query: 247 -ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E + + T ++NG C G + A+ D+ + + V + T ++ KK
Sbjct: 321 DEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKK 380
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G + ALRL M +KG + D TCN I C R EA +L M+ RG PNV ++
Sbjct: 381 GMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSF 440
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
+ LI CK + ME+K + P+ +T+N ++ K EE ++ M
Sbjct: 441 SILIDIYCKEQNFAEARRLFKVMEKKGKA--PSVVTYNAFIERYCKKGKMEEAYKLINEM 498
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+ G T TY ++ D+ + EM + G+ + +YTV+I GL GR
Sbjct: 499 QERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRA 558
Query: 483 EDALSYFHEMRLKGMVPE 500
++A + EM +G+VP+
Sbjct: 559 DEAFKLYDEMNKEGIVPD 576
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 175/449 (38%), Gaps = 86/449 (19%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILD---VLGRARRFVELIQVFDEMPDLVNEKTY 191
D A F + R ++ NV I++ + R V I P +V EK
Sbjct: 67 DLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIV-EKFC 125
Query: 192 GILLNRYAAAHMVEEAIGVFD--RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
+L Y M + ++ VFD R+K F E+D+ S F+ LL L R ++E+ F
Sbjct: 126 DMLFRVYMDNRMFDSSLEVFDYARKKGF-EIDERSCFE-FLLALKRSGNMELCVEFLRQM 183
Query: 250 KNEFGYDIKTMN--IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA------ 301
+ G +I+ + +++G C G V AK +++ +P +TY T +N
Sbjct: 184 VDS-GIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKD 242
Query: 302 -----------------------------LTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
++ K+ A +LF M +KG +PDV
Sbjct: 243 VGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTS 302
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
II+ C + A + EM R +PN TY +LI CK M+ +++M+ K
Sbjct: 303 IINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKG 362
Query: 393 GSCLPNEITFNYLLKSLKKP--------------------------------------EE 414
N + FN L+ K EE
Sbjct: 363 VDV--NRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREE 420
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+L ME G + ++++++ +Y + R ++ MEKKG P +Y I
Sbjct: 421 AKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIE 480
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
KG++E+A +EM+ +G++P+ T
Sbjct: 481 RYCKKGKMEEAYKLINEMQERGLMPDTYT 509
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 133/313 (42%), Gaps = 38/313 (12%)
Query: 178 VFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
+FDEM + + N TYG L+N A ++ A + + + G + F L+ C
Sbjct: 319 LFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYC 378
Query: 235 RYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ ++ A ++ F D T NII +G+C EAKR + + P+ V
Sbjct: 379 KKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVV 438
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
+++ ++ K+ A RLF+ M +KG+ P VVT N I+ C K ++ EA +++ EM
Sbjct: 439 SFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEM 498
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
+ RG +P+ TY SLI ++ E +EM Q
Sbjct: 499 QERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQL---------------------- 536
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
G + TY VI+ D+ ++EM K+G+ PD Y+ +I
Sbjct: 537 ------------GLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 584
Query: 474 HGLYDKGRLEDAL 486
L+ G L L
Sbjct: 585 ASLHKVGPLVSGL 597
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 6/203 (2%)
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
++L +F +KG + D +C + AL + +E LR+M + G V ++ +++
Sbjct: 140 SSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVV 199
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNG 426
LCK + +DE+ K P+ IT+N LL +K V +L ME+N
Sbjct: 200 DGLCKKGEVVRAKALMDELVCKGFK--PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 257
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ TY ++++ Y ++ ++EM KKG+ PD YT +I+ G ++ A
Sbjct: 258 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 317
Query: 487 SYFHEMRLKGMVPEPRT-GILVN 508
F EM + +VP T G L+N
Sbjct: 318 VLFDEMTERRLVPNAYTYGALIN 340
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 195/414 (47%), Gaps = 24/414 (5%)
Query: 131 RYRFDWEAAYTFFKWV--SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-----P 183
R + A FF V S D P ++ +++D+L + F + DEM P
Sbjct: 109 RRGIPFPEALAFFNHVLPSLPTDSLP--ELYASMMDLLAKHHHFPLARHLLDEMRKRSIP 166
Query: 184 DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGE-LDDLSAFQNLLLWLCRYKHVEVA 242
++ + L+ RY A M EA +F +E+G + D + +LL L + + A
Sbjct: 167 --ISSQVILALIRRYVRAGMSSEASDLFRSMEEYGGGVPDPAVLASLLGALSKKRLASEA 224
Query: 243 ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
+ F+S K+ F D+ +++ WC G + +A++ + ++ ++ P+ TY ++A+
Sbjct: 225 QALFDSYKSVFTPDVVLYTTLVHAWCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAM 284
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
+ G++ A L M + G P+ T N I+ A R + L+V +M+ GC P++
Sbjct: 285 YRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDI 344
Query: 363 TTYNSLIKHLCKIKR--METVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPW 417
TYN L++ C + ++ + L +M K C P+ TFN +LK L +
Sbjct: 345 ITYNFLMETHCGKGQSNLDAAMKLLLKMIAKG--CTPDCHTFNPMLKLVVVLGNVDAAHK 402
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ ERM+ CK + TYN+++KL+ D V ++M+ +G+ P+ +Y +I
Sbjct: 403 LYERMQELQCKPNVITYNLLMKLFGKDKSMDMVLRIKKDMDAQGVEPNVNTYGALIETFC 462
Query: 478 DKGRLEDALSYFHEM-RLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSL 530
+G + A + EM +K + P+ V DM + L + Q +K +L L
Sbjct: 463 GRGNWKRAYATLREMLEVKSLKPKKP----VYDMVLVLLRKAGQLRKHEELVEL 512
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 151/317 (47%), Gaps = 8/317 (2%)
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
G L A + + ++ FG + L+ LCR H+ A + S+
Sbjct: 90 GKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVL-SKMF 148
Query: 252 EFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ G D T ++NG C G + EA + ++ P++VT+ V+ L KKG +
Sbjct: 149 KLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVS 208
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A +F+ M EKG +P++ T N +++ C + + +A +V M +GC P+V +Y+ LI
Sbjct: 209 EARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILI 268
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNG 426
CK +R++ L +M +K +PN +T+N L++ L E + ++M +G
Sbjct: 269 NGYCKSRRIDEAKALLTQMSEK--ELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSG 326
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ TY+++L ++ M+++ + PD Y ++I G++ G+LE A
Sbjct: 327 MLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAK 386
Query: 487 SYFHEMRLKGMVPEPRT 503
F ++ G+ P RT
Sbjct: 387 ELFSKLFANGIRPSVRT 403
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 159/346 (45%), Gaps = 17/346 (4%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
N +++ L R + V +M PD V T+ L+N ++EA+ +F
Sbjct: 123 TLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSV---TFTTLINGLCNEGRIKEAVELF 179
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCV 269
+ + + F L+ LC+ V A FE+ E G +I T N ++NG+C+
Sbjct: 180 NEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFET-MTEKGVEPNIYTYNALMNGYCL 238
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ +A + ++ ++ C P +Y+ +N K ++ A L M EK P+ VT
Sbjct: 239 RLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVT 298
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N ++ LC + EA E+ ++M + G LPN+ TY+ L+ LCK +E + L M+
Sbjct: 299 YNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQ 358
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
++ P+ + +N L++ + K E + ++ NG + S TYN+++K +
Sbjct: 359 ERKLE--PDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGL 416
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
D+ + +ME G PD SY V+I G A+ EM
Sbjct: 417 SDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEM 462
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 172/373 (46%), Gaps = 15/373 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV----NEKTYG 192
+A +F++ + + P L + + +++ ++ + ++M DL N+ T
Sbjct: 69 DAMASFYRMIHM--NPRPSFVELGKFLGSIAKKKQYSTVVSLCNQM-DLFGVAHNDYTLN 125
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKN 251
IL+N + A+ V + + G D F L+ LC + E E F E
Sbjct: 126 ILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGR 185
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ + T I+++ C G V EA+ ++ + + EP+ TY +N + ++ A
Sbjct: 186 DAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDA 245
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++F+ M KG P V + + +I+ C +RI EA +L +M + +PN TYN+L++
Sbjct: 246 SKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQG 305
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCK 428
LC + E +M + LPN T++ LL L K EE +L M+ +
Sbjct: 306 LCHASSLLEAQELFKKM--CSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLE 363
Query: 429 MSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
YN++++ +++ E + + ++ G+ P R+Y +MI GL +G ++A
Sbjct: 364 PDIVLYNILIQGMFIAGKLE-VAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYK 422
Query: 488 YFHEMRLKGMVPE 500
F +M G +P+
Sbjct: 423 LFRKMEDDGFLPD 435
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 140/295 (47%), Gaps = 14/295 (4%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
T+T ++V+V+ + EA F+ ++ +G P +NA+++ + +V
Sbjct: 191 TVTFTILVDVLCKKGMVSEAR-CVFETMTEKG-VEPNIYTYNALMNGYCLRLEMNDASKV 248
Query: 179 FDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
F+ M P + +Y IL+N Y + ++EA + + E + + + L+
Sbjct: 249 FEIMVGKGCAPSV---HSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQG 305
Query: 233 LCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LC + E E F + + +++T +I+L+G C G++ EA + + + K EPD
Sbjct: 306 LCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPD 365
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
V Y + + GKL A LF ++ G +P V T N +I L + EA ++ R
Sbjct: 366 IVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFR 425
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
+M++ G LP+ +YN +I+ + + T + +DEM + S + TF LL
Sbjct: 426 KMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSA--DSSTFKMLL 478
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 6/228 (2%)
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
F++ +I P V F+ ++ KK + T + L M G + T N +I++LC
Sbjct: 74 FYR-MIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLC 132
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
I A+ VL +M G P+ T+ +LI LC R++ E +EM ++ +PN
Sbjct: 133 RLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDA--MPN 190
Query: 399 EITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+TF L+ L K E V E M G + + TYN ++ Y + +E
Sbjct: 191 TVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFE 250
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
M KG P SY+++I+G R+++A + +M K ++P T
Sbjct: 251 IMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVT 298
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 397 PNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
P+ + L S+ K ++ V+ +M+ G + T N+++
Sbjct: 84 PSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSV 143
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDM 510
+M K G+ PD ++T +I+GL ++GR+++A+ F+EM + +P T ++ D+
Sbjct: 144 LSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDV 200
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 167/349 (47%), Gaps = 15/349 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R P + +++ + ++ + VE ++F+EM PD E TY L++ Y A
Sbjct: 374 RRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPD---EVTYTALIDGYCKA 430
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTM 260
++EA V ++ + G ++ + L LC+ ++VA E E + ++ T
Sbjct: 431 GEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTY 490
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N I+NG C +GN+ + + +++ + PD++TY T ++A K G++ A L + M
Sbjct: 491 NTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLN 550
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
K +P +VT N +++ C + + ++ M +G +PN TT+NSL+K C M
Sbjct: 551 KRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRA 610
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PWVLER-MERNGCKMSTDTYNVI 437
E M + +P+ T+N L+K K + W L + M G ++ TY+ +
Sbjct: 611 TTEIYKAMHDRG--VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDAL 668
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
++ + + R +EEM K G+ ++ Y + + Y++G E L
Sbjct: 669 IRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITL 717
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 140/304 (46%), Gaps = 6/304 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNI 262
+++ + + D K G D + N++L LC+ V AE + + D
Sbjct: 293 LDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTT 352
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++G+C LGNV A + + ++ + K PD VTY + ++ + K GK+ A +F M KG
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+PD VT +ID C + EA V +M +G PNV TY +L LCK ++
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVAN 472
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILK 439
E L EM +K PN T+N ++ L K E+ ++E M+ G T TY ++
Sbjct: 473 ELLHEMSRKGLQ--PNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMD 530
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
Y K M K + P ++ V+++G G LED M KG++P
Sbjct: 531 AYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMP 590
Query: 500 EPRT 503
T
Sbjct: 591 NATT 594
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 141/330 (42%), Gaps = 37/330 (11%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNI 262
V EA + +++G D + ++ C+ +V A F E + + DI T
Sbjct: 328 VVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTS 387
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++G C G + EA+ + +++ EPD VTY ++ K G++ A + M +KG
Sbjct: 388 VIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKG 447
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P+VVT + D LC I A E+L EM +G PNV TYN+++ LCKI +E
Sbjct: 448 LTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTV 507
Query: 383 EYLDEMEQK---------------------------------NGSCLPNEITFNYLLKSL 409
+ ++EM+ N P +TFN L+
Sbjct: 508 KLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGF 567
Query: 410 KKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
E+ ++E M G + T+N ++K Y + ++ M +G+ PD
Sbjct: 568 CMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDS 627
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+Y ++I G +++A EM KG
Sbjct: 628 NTYNILIKGHCKARNMKEAWFLHKEMVEKG 657
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 161/359 (44%), Gaps = 21/359 (5%)
Query: 176 IQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
++VF+E P+L N + I+L+ V EA + + + G D+ ++ ++
Sbjct: 227 VKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSG 286
Query: 233 LCRYKHVEVAETFFESEK------NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
CR ++ + K +E+ Y+ NIIL C G V EA++ + + K
Sbjct: 287 YCRIGELDKVLKLVDELKGKGLKPDEYIYN----NIIL-LLCKNGEVVEAEQLLRGMRKW 341
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
PD+V Y T ++ K G + A +LF M K PD+VT +I +C ++ EA
Sbjct: 342 GVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEA 401
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
E+ EM +G P+ TY +LI CK M+ + ++M QK + PN +T+ L
Sbjct: 402 REMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLT--PNVVTYTALA 459
Query: 407 KSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
L K E+ +L M R G + + TYN I+ ++ EEM+ G
Sbjct: 460 DGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFY 519
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIK-LKERGEQ 520
PD +YT ++ G + A M K + P T +L+N + + E GE+
Sbjct: 520 PDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGER 578
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 6/270 (2%)
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK-LGTALRLFQAMWEKGRKPDVVT 329
G V EA++ + +++ + F++ L+ + + A+++F+ E G + V+
Sbjct: 185 GFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVS 244
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
CN ++ LC ++ EA +L +M +RG P+V +Y ++ C+I ++ V + +DE++
Sbjct: 245 CNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELK 304
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
K P+E +N ++ L K EV +L M + G Y ++ +
Sbjct: 305 GKGLK--PDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGN 362
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGIL 506
++EM +K + PD +YT +IHG+ G++ +A F+EM +KG+ P+ T
Sbjct: 363 VSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTA 422
Query: 507 VNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
+ D K E E ++ GL N
Sbjct: 423 LIDGYCKAGEMKEAFSVHNQMVQKGLTPNV 452
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 108/272 (39%), Gaps = 26/272 (9%)
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRY- 198
+SR+G P +N I++ L + + +++ +EM PD + TY L++ Y
Sbjct: 478 MSRKG-LQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTI---TYTTLMDAYC 533
Query: 199 -----AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKN 251
A AH + + ++R + L F L+ C +E E E EK
Sbjct: 534 KMGEMAKAHELLRIM--LNKRLQ----PTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N ++ +C+ N+ +K + PDS TY + K + A
Sbjct: 588 IMP-NATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEA 646
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L + M EKG T + +I +K+ EA ++ EM+ G + Y+ +
Sbjct: 647 WFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDV 706
Query: 372 LCKIKRMETVYEYLDE-MEQKNGSCLPNEITF 402
+ E E DE M + +G+ I F
Sbjct: 707 NYEEGNWEITLELCDEFMTELSGTIFVVYICF 738
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 167/361 (46%), Gaps = 14/361 (3%)
Query: 151 DYSPG--SNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMV- 204
D +PG + + A++ RA RF + + VF M D + TY ++L+ Y+ +
Sbjct: 165 DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPW 224
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV--EVAETFFESEKNEFGYDIKTMNI 262
+E + + KE G D + N L+ CR + + E A+ F E + + F D T N
Sbjct: 225 KEVVELVASMKEHGVAPDRYTY-NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNS 283
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+L+ + EA +++ + C P VTY + +++ K G L A+ L Q M KG
Sbjct: 284 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 343
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
KPDVVT +I L +I A+ EM GC PN+ TYN+LIK + +
Sbjct: 344 IKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 403
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILK 439
DE+ ++ +P+ +T+N LL + EV V + M++ G DTY ++
Sbjct: 404 AVFDEL--RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 461
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
Y D ++ M + G+ PD +Y ++ L GR E A F EM + P
Sbjct: 462 SYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 521
Query: 500 E 500
+
Sbjct: 522 D 522
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 187/449 (41%), Gaps = 84/449 (18%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PD 184
R R ++ A F + G + P FN++LDV G+ARR E I+V EM P
Sbjct: 254 RRRALYKEAAQVFDEMKASG-FEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPS 312
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL----------- 233
+V TY L++ Y ++E+A+ + + G D+ + L+ L
Sbjct: 313 VV---TYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIV 369
Query: 234 --------------CRY-----------KHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
C Y K E+ F E F DI T N +L +
Sbjct: 370 EYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFG 429
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G E +K++ K+ P+ TY + +++ ++ G A+++++ M E G PDV
Sbjct: 430 QNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVS 489
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE- 387
T N ++ AL R +A ++ EM+ R C P+ +Y+SL+ KR++ + D+
Sbjct: 490 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDI 549
Query: 388 --------------------------------MEQKNGSCLPNEITFNYLLKSLKK---P 412
+E + C + N ++ K
Sbjct: 550 YSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMV 609
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNW-DCEDKVRHTWEEMEKKGMGPDQRSYTV 471
+V +L M+ + +S TYN ++ +Y DCE K + E++ G+ PD+ SY
Sbjct: 610 RKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE-KCENILTEIKSSGVRPDRYSYNT 668
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+I+ KG++++A F EM+ G+ P+
Sbjct: 669 VIYAYGRKGQMKEASRLFSEMKCSGLKPD 697
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 153/373 (41%), Gaps = 49/373 (13%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
+T +++++V ++ W+ + G +P +N ++ R + E QVF
Sbjct: 208 VTYNVVLHVYSKMAVPWKEVVELVASMKEHG-VAPDRYTYNTLISCCRRRALYKEAAQVF 266
Query: 180 DEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
DEM PD V T+ LL+ Y A
Sbjct: 267 DEMKASGFEPDKV---TFNSLLDVYGKAR------------------------------- 292
Query: 234 CRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+H E E E E+ + T N +++ + G + +A +++ +PD V
Sbjct: 293 ---RHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVV 349
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY T ++ L + GK+ A+ + M G KP++ T N +I + + PE + V E+
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEL 409
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP- 412
++ G +P++ T+N+L+ + V EM K +P T+ L+ S +
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM--KKAGYIPERDTYVSLISSYSRCG 467
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+ + +RM G TYN +L ++ + EME++ PD+ SY+
Sbjct: 468 LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYS 527
Query: 471 VMIHGLYDKGRLE 483
++H + RL+
Sbjct: 528 SLLHAYANAKRLD 540
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 123 DLIVNVINRYR----FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
D V++I+ Y FD A +K + G Y P + +NA+L L R R+ + ++
Sbjct: 454 DTYVSLISSYSRCGLFDL--AMQIYKRMMEAGIY-PDVSTYNAVLSALARGGRWEQAEKL 510
Query: 179 FDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD-------------------- 212
F EM PD E +Y LL+ YA A +++ + D
Sbjct: 511 FAEMEERDCKPD---EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLV 567
Query: 213 ---------RRKEFGELD------DLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYD 256
K F EL D++ ++ + + V E K +
Sbjct: 568 NSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLS 627
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
T N +++ + LG+ + + +I S PD +Y T + A +KG++ A RLF
Sbjct: 628 AATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFS 687
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M G KPDVVT N + + EA+E++R M +GC PN TYNS+++ C+
Sbjct: 688 EMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNG 747
Query: 377 RMETVYEYLDEMEQ 390
++ ++ + Q
Sbjct: 748 KLTDAKIFVSNLPQ 761
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 149/345 (43%), Gaps = 9/345 (2%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
R + P +N +L V G+ E+ VF EM + TY L++ Y+ +
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 469
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
+ A+ ++ R E G D+S + +L L R E AE F E E+ + D + + +
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L+ + + + K DI + EP + T V +K L A + F + +K
Sbjct: 530 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 589
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
D+ N ++ + + + ++L MK + TYNSL+ ++ E
Sbjct: 590 SLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCEN 649
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
L E+ K+ P+ ++N ++ + + +E + M+ +G K TYN+ +K
Sbjct: 650 ILTEI--KSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKS 707
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
YV+ ++ M +G P++R+Y ++ G G+L DA
Sbjct: 708 YVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 752
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 101/243 (41%), Gaps = 45/243 (18%)
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
AT + + + G+L A A+ + PD ++ A R +A+ V R M +
Sbjct: 145 ATAIRVMARAGRLAEA----SALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVD 200
Query: 356 RGCLPNVTTYNSLIKHLCKIK--------------------------------RMETVY- 382
G P + TYN ++ K+ R +Y
Sbjct: 201 SGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYK 260
Query: 383 ---EYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNV 436
+ DEM K P+++TFN LL ++ +E V++ MER GC S TYN
Sbjct: 261 EAAQVFDEM--KASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNS 318
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ YV ++ +EME KG+ PD +YT +I GL G+++ A+ + EM G
Sbjct: 319 LISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 378
Query: 497 MVP 499
P
Sbjct: 379 CKP 381
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 22/163 (13%)
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
RE+ G L + + I+ + + R+ LD P+ + L+ +
Sbjct: 130 RELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPG------PDAGAYTALVSAFS 183
Query: 411 KP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE-------MEKK 460
+ + V RM +G + + TYNV+L +Y K+ W+E M++
Sbjct: 184 RAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVY------SKMAVPWKEVVELVASMKEH 237
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G+ PD+ +Y +I + ++A F EM+ G P+ T
Sbjct: 238 GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVT 280
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 6/318 (1%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N TY +L+ Y+ + +EEA +FD + G D+ + +++ W C++ +++ A F
Sbjct: 257 NVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLF 316
Query: 247 -ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E + + T ++NG C G + A+ D+ + + V + T ++ KK
Sbjct: 317 DEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKK 376
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G + ALRL M +KG + D TCN I C R EA +L M+ RG PNV ++
Sbjct: 377 GMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSF 436
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
+ LI CK + ME+K + P+ +T+N ++ K EE ++ M
Sbjct: 437 SILIDIYCKEQNFAEARRLFKVMEKKGKA--PSVVTYNAFIERYCKKGKMEEAYKLINEM 494
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+ G T TY ++ D+ + EM + G+ + +YTV+I GL GR
Sbjct: 495 QERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRA 554
Query: 483 EDALSYFHEMRLKGMVPE 500
++A + EM +G+VP+
Sbjct: 555 DEAFKLYDEMNKEGIVPD 572
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 175/449 (38%), Gaps = 86/449 (19%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILD---VLGRARRFVELIQVFDEMPDLVNEKTY 191
D A F + R ++ NV I++ + R V I P +V EK
Sbjct: 63 DLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIV-EKFC 121
Query: 192 GILLNRYAAAHMVEEAIGVFD--RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
+L Y M + ++ VFD R+K F E+D+ S F+ LL L R ++E+ F
Sbjct: 122 DMLFRVYMDNRMFDSSLEVFDYARKKGF-EIDERSCFE-FLLALKRSGNMELCVEFLRQM 179
Query: 250 KNEFGYDIKTMN--IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA------ 301
+ G +I+ + +++G C G V AK +++ +P +TY T +N
Sbjct: 180 VDS-GIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKD 238
Query: 302 -----------------------------LTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
++ K+ A +LF M +KG +PDV
Sbjct: 239 VGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTS 298
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
II+ C + A + EM R +PN TY +LI CK M+ +++M+ K
Sbjct: 299 IINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKG 358
Query: 393 GSCLPNEITFNYLLKSLKKP--------------------------------------EE 414
N + FN L+ K EE
Sbjct: 359 VDV--NRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREE 416
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+L ME G + ++++++ +Y + R ++ MEKKG P +Y I
Sbjct: 417 AKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIE 476
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
KG++E+A +EM+ +G++P+ T
Sbjct: 477 RYCKKGKMEEAYKLINEMQERGLMPDTYT 505
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 133/313 (42%), Gaps = 38/313 (12%)
Query: 178 VFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
+FDEM + + N TYG L+N A ++ A + + + G + F L+ C
Sbjct: 315 LFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYC 374
Query: 235 RYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ ++ A ++ F D T NII +G+C EAKR + + P+ V
Sbjct: 375 KKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVV 434
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
+++ ++ K+ A RLF+ M +KG+ P VVT N I+ C K ++ EA +++ EM
Sbjct: 435 SFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEM 494
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
+ RG +P+ TY SLI ++ E +EM Q
Sbjct: 495 QERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQL---------------------- 532
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
G + TY VI+ D+ ++EM K+G+ PD Y+ +I
Sbjct: 533 ------------GLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 580
Query: 474 HGLYDKGRLEDAL 486
L+ G L L
Sbjct: 581 ASLHKVGPLVSGL 593
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 6/203 (2%)
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
++L +F +KG + D +C + AL + +E LR+M + G V ++ +++
Sbjct: 136 SSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVV 195
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNG 426
LCK + +DE+ K P+ IT+N LL +K V +L ME+N
Sbjct: 196 DGLCKKGEVVRAKALMDELVCKGFK--PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 253
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ TY ++++ Y ++ ++EM KKG+ PD YT +I+ G ++ A
Sbjct: 254 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 313
Query: 487 SYFHEMRLKGMVPEPRT-GILVN 508
F EM + +VP T G L+N
Sbjct: 314 VLFDEMTERRLVPNAYTYGALIN 336
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 208/497 (41%), Gaps = 68/497 (13%)
Query: 69 LVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELT-----LTDD 123
L S NS S + P + N+ N++ CS + AL E+ L
Sbjct: 44 LNQSQTNSISNSLYHLLPQTQNPNNIVNLI--CSNLKQHNSNLALLHTEVNALLPHLGAQ 101
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP 183
I V+ R + D A +FF WV + P + + ++ L +R F + ++ E+
Sbjct: 102 EISRVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELV 161
Query: 184 DLVNEK----------------------TYGILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
+LV + + +L+ Y V E + F R G +
Sbjct: 162 ELVKDDLPSEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVP 221
Query: 222 DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
+ LL L + + + E + E E+ ++ T NI+ + C G+ + +F
Sbjct: 222 TVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFL 281
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+ + + +PD VTY T +N+ +KG+L A L++ M+ +G PD+V+ +++ LC +
Sbjct: 282 EKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKE 341
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM------------ 388
R+ EA ++ M +RG P++ TYN+LI CK +M+ L +M
Sbjct: 342 GRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTC 401
Query: 389 ----------------------EQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERME 423
Q+ G + +I ++YL+ +L +P +LERM
Sbjct: 402 WVLVEGYGKEGKFLSALNLVVELQRFGVSISQDI-YSYLIVALCRENRPFAAKNLLERMS 460
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
++G K + YN ++K + DC + EM K + P+ +Y +I L R
Sbjct: 461 KDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSM 520
Query: 484 DALSYFHEMRLKGMVPE 500
+ S EM GM+P+
Sbjct: 521 EGESLVGEMVASGMLPD 537
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 129/350 (36%), Gaps = 53/350 (15%)
Query: 101 CSVSTKGEIEKALNQCELTLTDDLIVN---VINRY--RFDWEAAYTFFKWVSREGDYSPG 155
C G++ K L + E D IV +IN Y + + A+ +K + R G P
Sbjct: 269 CKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRG-VVPD 327
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE--- 206
+ A+++ L + R E Q+F M PD+V TY L++ Y ++E
Sbjct: 328 LVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIV---TYNTLIHGYCKEGKMQESRS 384
Query: 207 --------------------------------AIGVFDRRKEFGELDDLSAFQNLLLWLC 234
A+ + + FG + L++ LC
Sbjct: 385 LLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALC 444
Query: 235 RYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
R A+ E K+ +++ N ++ +C + EA +++ + +P+
Sbjct: 445 RENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLA 504
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY + L++ + L M G PD+ C + C + I +A +L
Sbjct: 505 TYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLSFF 564
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
+ + ++N+LI+ + E D M + LPN +T N
Sbjct: 565 AKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKM--GLLPNPLTCN 612
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 166/361 (45%), Gaps = 14/361 (3%)
Query: 151 DYSPG--SNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMV- 204
D +PG + + A++ RA RF + + VF M D + TY ++L+ Y+ +
Sbjct: 165 DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPW 224
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV--EVAETFFESEKNEFGYDIKTMNI 262
+E + + KE G D + N L+ CR + + E A+ F E + + F D T N
Sbjct: 225 KEVVELVASMKEHGVAPDRYTY-NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNS 283
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+L+ + EA +++ + C P VTY + +++ K G L A+ L Q M KG
Sbjct: 284 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 343
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
KPDVVT +I L +I A+ EM GC PN+ TYN+LIK + +
Sbjct: 344 MKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 403
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILK 439
DE ++ +P+ +T+N LL + EV V + M++ G DTY ++
Sbjct: 404 AVFDEF--RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 461
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
Y D ++ M + G+ PD +Y ++ L GR E A F EM + P
Sbjct: 462 SYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 521
Query: 500 E 500
+
Sbjct: 522 D 522
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 187/449 (41%), Gaps = 84/449 (18%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PD 184
R R ++ A F + G + P FN++LDV G+ARR E I+V EM P
Sbjct: 254 RRRALYKEAAQVFDEMKASG-FEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPS 312
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL----------- 233
+V TY L++ Y ++E+A+ + + G D+ + L+ L
Sbjct: 313 VV---TYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIV 369
Query: 234 --------------CRY-----------KHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
C Y K E+ F E F DI T N +L +
Sbjct: 370 EYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFG 429
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G E +K++ K+ P+ TY + +++ ++ G A+++++ M E G PDV
Sbjct: 430 QNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVS 489
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE- 387
T N ++ AL R +A ++ EM+ R C P+ +Y+SL+ KR++ + D+
Sbjct: 490 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDI 549
Query: 388 --------------------------------MEQKNGSCLPNEITFNYLLKSLKK---P 412
+E + C + N ++ K
Sbjct: 550 YSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMV 609
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNW-DCEDKVRHTWEEMEKKGMGPDQRSYTV 471
+V +L M+ + +S TYN ++ +Y DCE K + E++ G+ PD+ SY
Sbjct: 610 RKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE-KCENILTEIKSSGVRPDRYSYNT 668
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+I+ KG++++A F EM+ G+ P+
Sbjct: 669 VIYAYGRKGQMKEASRLFSEMKCSGLKPD 697
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 152/373 (40%), Gaps = 49/373 (13%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
+T +++++V ++ W+ + G +P +N ++ R + E QVF
Sbjct: 208 VTYNVVLHVYSKMAVPWKEVVELVASMKEHG-VAPDRYTYNTLISCCRRRALYKEAAQVF 266
Query: 180 DEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
DEM PD V T+ LL+ Y A
Sbjct: 267 DEMKASGFEPDKV---TFNSLLDVYGKAR------------------------------- 292
Query: 234 CRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+H E E E E+ + T N +++ + G + +A +++ +PD V
Sbjct: 293 ---RHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 349
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY T ++ L + GK+ A+ + M G KP++ T N +I + + PE + V E
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF 409
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP- 412
++ G +P++ T+N+L+ + V EM K +P T+ L+ S +
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM--KKAGYIPERDTYVSLISSYSRCG 467
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+ + +RM G TYN +L ++ + EME++ PD+ SY+
Sbjct: 468 LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYS 527
Query: 471 VMIHGLYDKGRLE 483
++H + RL+
Sbjct: 528 SLLHAYANAKRLD 540
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 123 DLIVNVINRYR----FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
D V++I+ Y FD A +K + G Y P + +NA+L L R R+ + ++
Sbjct: 454 DTYVSLISSYSRCGLFDL--AMQIYKRMMEAGIY-PDVSTYNAVLSALARGGRWEQAEKL 510
Query: 179 FDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD-------------------- 212
F EM PD E +Y LL+ YA A +++ + D
Sbjct: 511 FAEMEERDCKPD---EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLV 567
Query: 213 ---------RRKEFGELD------DLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYD 256
K F EL D++ ++ + + V E K +
Sbjct: 568 NSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLS 627
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
T N +++ + LG+ + + +I S PD +Y T + A +KG++ A RLF
Sbjct: 628 AATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFS 687
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M G KPDVVT N + + EA+E++R M +GC PN TYNS+++ C+
Sbjct: 688 EMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNG 747
Query: 377 RMETVYEYLDEMEQ 390
++ ++ + Q
Sbjct: 748 KLTDAKIFVSNLPQ 761
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 149/345 (43%), Gaps = 9/345 (2%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
R + P +N +L V G+ E+ VF EM + TY L++ Y+ +
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 469
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
+ A+ ++ R E G D+S + +L L R E AE F E E+ + D + + +
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L+ + + + K DI + EP + T V +K L A + F + +K
Sbjct: 530 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 589
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
D+ N ++ + + + ++L MK + TYNSL+ ++ E
Sbjct: 590 SLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCEN 649
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
L E+ K+ P+ ++N ++ + + +E + M+ +G K TYN+ +K
Sbjct: 650 ILTEI--KSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKS 707
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
YV+ ++ M +G P++R+Y ++ G G+L DA
Sbjct: 708 YVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 752
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 45/243 (18%)
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
AT + + + G+L A A+ + PD ++ A R +A+ V R M +
Sbjct: 145 ATAIRVMARAGRLAEA----SALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVD 200
Query: 356 RGCLPNVTTYNSLIKHLCKIK--------------------------------RMETVY- 382
G P + TYN ++ K+ R +Y
Sbjct: 201 SGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYK 260
Query: 383 ---EYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNV 436
+ DEM K P+++TFN LL ++ +E V++ MER GC S TYN
Sbjct: 261 EAAQVFDEM--KASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNS 318
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ YV ++ +EME KGM PD +YT +I GL G+++ A+ + EM G
Sbjct: 319 LISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 378
Query: 497 MVP 499
P
Sbjct: 379 CKP 381
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
RE+ G L + + I+ + + R+ LD P+ + L+ +
Sbjct: 130 RELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPG------PDAGAYTALVSAFS 183
Query: 411 KP---EEVPWVLERMERNGCKMSTDTYNVILKLY----VNWDCEDKVRHTWEEMEKKGMG 463
+ + V RM +G + + TYNV+L +Y V W +V M++ G+
Sbjct: 184 RAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWK---EVVELVASMKEHGVA 240
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
PD+ +Y +I + ++A F EM+ G P+ T
Sbjct: 241 PDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVT 280
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 161/325 (49%), Gaps = 9/325 (2%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+++++ L R+RRF + + + + NE + L+ Y AH+VE+ I +F +
Sbjct: 84 YSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYGKAHLVEKGIELFHQMP 143
Query: 216 EFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVY 274
F L +F LL L + +E F ++ + +F + + NI++ GW G
Sbjct: 144 SFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFRPNSVSYNIMIKGWIKKGGWE 203
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + ++++ +P VTY +F+ L +KG++ TAL LF+ M EKG P+ VT ++
Sbjct: 204 QACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYALLM 263
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ CF + EA +++ +M+ GC Y L+ HL K ++ + L+EM+++
Sbjct: 264 EGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLK 323
Query: 395 CLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
P+ +T+N L+ L K +V VL +M+ GC + TY +++ Y N D
Sbjct: 324 --PDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGDFDGAM 381
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGL 476
M G P +++ ++ GL
Sbjct: 382 KILNAMLMSGHYPHLKTFASLVVGL 406
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 12/289 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFD---EMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
FN +L+ L +F + ++F EM N +Y I++ + E+A +FD
Sbjct: 154 FNVLLNTLVDCDQFSKASEIFQQAYEMDFRPNSVSYNIMIKGWIKKGGWEQACNLFDEML 213
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDIKTMNIILNGWCVLGNV 273
E G + + + L LCR ++ A F+ +EK + T +++ GWC +G
Sbjct: 214 EKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKGHHPNAV-TYALLMEGWCFIGKY 272
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EAK+ D+ C+ V Y + L K G + L M ++ KPDVVT N +
Sbjct: 273 KEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNIL 332
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
++ LC + ++ +A +VL +M+ GC PN TY +I C + + L+ M
Sbjct: 333 VNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGH 392
Query: 394 SCLPNEITFNYLLKSLKKPEE----VPWVLERMERNGCKMSTDTYNVIL 438
P+ TF L+ L K E V +VLE ME+ + +T+ +++
Sbjct: 393 --YPHLKTFASLVVGLLKGENNDDYVCFVLEEMEKRQLRFDAETWRILI 439
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 134/302 (44%), Gaps = 6/302 (1%)
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI-IL 264
EA+ +F+ E G ++ +L+ L R + E ET +N +T+ + ++
Sbjct: 64 EALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALI 123
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ V + + + C ++ +N L + A +FQ +E +
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFR 183
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+ V+ N +I K +A + EM +G P+V TYNS + LC+ M+T
Sbjct: 184 PNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCL 243
Query: 385 LDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
M +K PN +T+ L++ + K +E ++ ME +GCK+ Y V++
Sbjct: 244 FKNMTEKGHH--PNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHL 301
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
D++ EM+K+ + PD +Y ++++ L +G++ DA +M++ G P
Sbjct: 302 GKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNA 361
Query: 502 RT 503
T
Sbjct: 362 AT 363
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 5/200 (2%)
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
AL LF+ EKG K + + +I L +R +L ++NR N T + +LI+
Sbjct: 65 ALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQ 124
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLERMERNGC 427
H K +E E +M N C +FN LL +L ++ + ++
Sbjct: 125 HYGKAHLVEKGIELFHQMPSFN--CFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDF 182
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ ++ +YN+++K ++ ++ + ++EM +KG+ P +Y + L KG ++ AL
Sbjct: 183 RPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALC 242
Query: 488 YFHEMRLKGMVPEPRTGILV 507
F M KG P T L+
Sbjct: 243 LFKNMTEKGHHPNAVTYALL 262
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 183/403 (45%), Gaps = 47/403 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A + ++R G P + ++ ++ L E + +EM + + T+ ++
Sbjct: 194 ALALLRGMARHG-CVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVV 252
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
V EA + DR G + + + LL LCR + + A
Sbjct: 253 RGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE---L 309
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
++ N ++ G G + EA ++ + C+PD+ TY+ ++ L K G++ +A+RL
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLL 369
Query: 316 QAMWEKGRKPDVVT--------C---------------------------NCIIDALCFK 340
+ M +KG P+VVT C N +I ALC
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
R+ EA+ +++EM+++GC P++ +YN++I HLC ++ME + + ++ + N I
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE--GVVANGI 487
Query: 401 TFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T+N ++ +L + ++ + + M +GC + +YN ++K D+ EEM
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+KG+ P+ SY ++I L + R+ DAL +M +G+ P+
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPD 590
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 161/399 (40%), Gaps = 45/399 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF------DEMPDLVNEKTYG 192
A + R P +N +L VL RA + + ++ D +P T+G
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPP--TTFTFG 179
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKN 251
+ EA+ + G + D +Q ++ LC V A T E
Sbjct: 180 VAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM 239
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA--------------- 296
D+ T + ++ G C LG V EA R ++ C P +TY
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA 299
Query: 297 ----------------TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
T + +GKL A L++ M KG +PD T + ++ LC
Sbjct: 300 RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKL 359
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
RI A+ +LREM+ +G PNV TY ++ CK + L+EM K + N
Sbjct: 360 GRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTL--NSQ 417
Query: 401 TFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
+N ++ +L K +E +++ M GC +YN I+ N + ++ H +E +
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++G+ + +Y +IH L GR +DA+ EM L G
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 120/274 (43%), Gaps = 32/274 (11%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T + C LG EA + + + C PD+V Y T ++AL +G + A L M
Sbjct: 177 TFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
G DV T + ++ +C R+ EA ++ M +GC+P V TY L++ LC++++
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296
Query: 379 ETVYEYLDEMEQKN--------GSCL---------------------PNEITFNYLLKSL 409
+ L + + N G CL P+ T++ L+ L
Sbjct: 297 DEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356
Query: 410 KKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K + +L ME+ G + TY ++L + D R EEM KG+ +
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ Y MI+ L GR+++A+ EMR +G P+
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPD 450
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 119/224 (53%), Gaps = 5/224 (2%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
+N + Y ++ ++EA+G+ + G D+ ++ ++ LC + +E AE
Sbjct: 414 LNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 473
Query: 246 FES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
FE+ E+ I T N I++ G +A R K++I C D V+Y + A+
Sbjct: 474 FENLLEEGVVANGI-TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 532
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K G + +L L + M EKG KP+ V+ N +I LC ++R+ +ALE+ ++M N+G P++
Sbjct: 533 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIV 592
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
TYN+LI LCK+ M L+++ +N P+ IT+N L+
Sbjct: 593 TYNTLINGLCKMGWMHAALNLLEKLHNENVH--PDIITYNILIS 634
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 9/226 (3%)
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
+ + P + T+ AL + G+ AL L + M G PD V +I ALC + +
Sbjct: 168 RDRVPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVT 227
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA +L EM GC +V T++ +++ +C + R+ +D M K C+P +T+ +
Sbjct: 228 EAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTK--GCMPGVMTYGF 285
Query: 405 LLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
LL+ L ++ +E +L R+ +++ +N ++ + + +E M KG
Sbjct: 286 LLQGLCRVRQADEARAMLGRVP----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKG 341
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
PD +Y++++HGL GR+ A+ EM KG P T +V
Sbjct: 342 CQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIV 387
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNVYEAKRF 279
D+ ++ L+ +C+ +V+ + E E E G + NI+++ C V +A
Sbjct: 520 DVVSYNGLIKAMCKDGNVDRSLVLLE-EMAEKGIKPNNVSYNILISELCKERRVRDALEL 578
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K ++ PD VTY T +N L K G + AL L + + + PD++T N +I C
Sbjct: 579 SKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638
Query: 340 KKRIPEALEVL 350
+ + +A +L
Sbjct: 639 VRLLDDAAMLL 649
>gi|297723955|ref|NP_001174341.1| Os05g0313900 [Oryza sativa Japonica Group]
gi|255676233|dbj|BAH93069.1| Os05g0313900 [Oryza sativa Japonica Group]
Length = 1070
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 161/355 (45%), Gaps = 48/355 (13%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEA 207
D P S+ FN ++ L + ++ + + +M L + + L++ +EE
Sbjct: 435 DAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEG 494
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNG 266
G+F++ K+ G + +L +CR K + A + E + N IK ++
Sbjct: 495 YGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQ 554
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G V EA +F +++ PD VTY+ +N + G++ AL LF+ + K PD
Sbjct: 555 LCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPD 614
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VV N +I+ ++ EA +++ EM +G P+V TYN +I CK R+E YLD
Sbjct: 615 VVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLD 674
Query: 387 EM--EQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
+M E+K P IT+ L+ S +P+E +KL
Sbjct: 675 KMVYEEKQ----PTVITYTSLIDGFCSAGRPDEA----------------------IKL- 707
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
W EM +KG P+ +YT I+GL GR+E AL+YF EM KG
Sbjct: 708 ------------WCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKG 750
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 164/359 (45%), Gaps = 28/359 (7%)
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
G+ VEL+ + + ++EKT +L++ + V++A+ +F + +G + DL+ +
Sbjct: 259 GKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMY 318
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
L+ LC+ K + A F+ K+ D++ + ++ +C G+ F + +
Sbjct: 319 SVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAE 378
Query: 286 SKCEPDSVT-YATFVNALTKKGKLGTALRLFQAMWEKGR-------------------KP 325
V Y + L G++ A +L ++M G+ KP
Sbjct: 379 YLKSGSVVPLYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKP 438
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ + N ++ LC K++ AL + ++M + GC + +N LI LC + R+E Y
Sbjct: 439 NSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIF 498
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG-CKMSTDTYNVILKLY 441
++M K+ P+E T+N L + K P+ +L M+ NG + ++ +L
Sbjct: 499 NQM--KDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLC 556
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ + V+ + M + G PD +Y+ ++G+ + G ++DAL F ++ K +P+
Sbjct: 557 FSGRVTEAVQFL-DGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPD 614
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 147/377 (38%), Gaps = 67/377 (17%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEA 207
+P S +N +LD L +A R + EM V++ T LL Y A ++A
Sbjct: 171 TPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPDDA 230
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
VF R E G +D+ HV + T+ + + W
Sbjct: 231 NDVFQRMSELGWVDE---------------HV-----------------LTTLMVAFSKW 258
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
G V A + T + V+ TK+G++ A+ +F M G D+
Sbjct: 259 ---GKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDL 315
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I+ LC +K I A+++ +EMK+ G P+V +I+ C+ + +++E
Sbjct: 316 AMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINE 375
Query: 388 MEQ--KNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC------------------ 427
+ K+GS +P +N +L+ L EV + + C
Sbjct: 376 NAEYLKSGSVVP---LYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHI 432
Query: 428 ----KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
K ++D++N+++ D ++M G + +IH L + RLE
Sbjct: 433 REDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLE 492
Query: 484 DALSYFHEMRLKGMVPE 500
+ F++M+ G+ P
Sbjct: 493 EGYGIFNQMKDLGLTPS 509
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 9/231 (3%)
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK-GRKPDVVTCNCIIDA 336
R D I ++C + L G TA+R F A G P+ T NC++DA
Sbjct: 124 RLAADAISARCLMTPGALGFLLRCLGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDA 183
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTY--NSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
L R +A LREM R +V Y SL++ C R + + M +
Sbjct: 184 LAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPDDANDVFQRMSELG-- 241
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
+E L+ + K +V +E ME G ++S T +V++ + DK
Sbjct: 242 -WVDEHVLTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAM 300
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ +M G D Y+V+I GL + + A+ F EM+ G+ P+ R
Sbjct: 301 DMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVR 351
>gi|222631078|gb|EEE63210.1| hypothetical protein OsJ_18020 [Oryza sativa Japonica Group]
Length = 975
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 158/350 (45%), Gaps = 38/350 (10%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEA 207
D P S+ FN ++ L + ++ + + +M L + + L++ +EE
Sbjct: 435 DAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEG 494
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNG 266
G+F++ K+ G + +L +CR K + A + E + N IK ++
Sbjct: 495 YGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQ 554
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G V EA +F +++ PD VTY+ +N + G++ AL LF+ + K PD
Sbjct: 555 LCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPD 614
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VV N +I+ ++ EA +++ EM +G P+V TYN +I CK R+E YLD
Sbjct: 615 VVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLD 674
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+M + E+ P V+ TY ++ + +
Sbjct: 675 KMVYE---------------------EKQPTVI-------------TYTSLIDGFCSAGR 700
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
D+ W EM +KG P+ +YT I+GL GR+E AL+YF EM KG
Sbjct: 701 PDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKG 750
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 164/359 (45%), Gaps = 28/359 (7%)
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
G+ VEL+ + + ++EKT +L++ + V++A+ +F + +G + DL+ +
Sbjct: 259 GKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMY 318
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
L+ LC+ K + A F+ K+ D++ + ++ +C G+ F + +
Sbjct: 319 SVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAE 378
Query: 286 SKCEPDSVT-YATFVNALTKKGKLGTALRLFQAMWEKGR-------------------KP 325
V Y + L G++ A +L ++M G+ KP
Sbjct: 379 YLKSGSVVPLYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKP 438
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ + N ++ LC K++ AL + ++M + GC + +N LI LC + R+E Y
Sbjct: 439 NSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIF 498
Query: 386 DEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG-CKMSTDTYNVILKLY 441
++M K+ P+E T+N L + K P+ +L M+ NG + ++ +L
Sbjct: 499 NQM--KDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLC 556
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ + V+ + M + G PD +Y+ ++G+ + G ++DAL F ++ K +P+
Sbjct: 557 FSGRVTEAVQF-LDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPD 614
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 148/380 (38%), Gaps = 67/380 (17%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEA 207
+P S +N +LD L +A R + EM V++ T LL Y A ++A
Sbjct: 171 TPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPDDA 230
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
VF R E G +D+ HV + T+ + + W
Sbjct: 231 NDVFQRMSELGWVDE---------------HV-----------------LTTLMVAFSKW 258
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
G V A + T + V+ TK+G++ A+ +F M G D+
Sbjct: 259 ---GKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDL 315
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I+ LC +K I A+++ +EMK+ G P+V +I+ C+ + +++E
Sbjct: 316 AMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINE 375
Query: 388 MEQ--KNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC------------------ 427
+ K+GS +P +N +L+ L EV + + C
Sbjct: 376 NAEYLKSGSVVP---LYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHI 432
Query: 428 ----KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
K ++D++N+++ D ++M G + +IH L + RLE
Sbjct: 433 REDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLE 492
Query: 484 DALSYFHEMRLKGMVPEPRT 503
+ F++M+ G+ P T
Sbjct: 493 EGYGIFNQMKDLGLTPSEFT 512
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 9/231 (3%)
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK-GRKPDVVTCNCIIDA 336
R D I ++C + L G TA+R F A G P+ T NC++DA
Sbjct: 124 RLAADAISARCLMTPGALGFLLRCLGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDA 183
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTY--NSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
L R +A LREM R +V Y SL++ C R + + M +
Sbjct: 184 LAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPDDANDVFQRMSELG-- 241
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
+E L+ + K +V +E ME G ++S T +V++ + DK
Sbjct: 242 -WVDEHVLTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAM 300
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ +M G D Y+V+I GL + + A+ F EM+ G+ P+ R
Sbjct: 301 DMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVR 351
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 158/341 (46%), Gaps = 6/341 (1%)
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
G R+ +E L++E TYG L+N + EA + + + ++ +
Sbjct: 162 GEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIY 221
Query: 227 QNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
++ LC+ V E + + + D+ T +++G+C LG E R D++
Sbjct: 222 NMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVD 281
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+ TY ++AL KKG LG A + M E+G++PD+VT N ++ C + E
Sbjct: 282 RNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVE 341
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A ++ G P+V +YN LI CK R++ ++M K + PN +T++ L
Sbjct: 342 ARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLA--PNIVTYSSL 399
Query: 406 LKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ L K + + E + G + TYN++L DK + M ++G+
Sbjct: 400 IDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGL 459
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
P+ SY ++I+G R+++A++ F EM + +VP+ T
Sbjct: 460 TPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVT 500
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 139/273 (50%), Gaps = 14/273 (5%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
+N TY IL++ M+ +A + + E G+ DL F L+ C Y V A
Sbjct: 286 LNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKL 345
Query: 246 FESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
F++ E G D+ + NI++ G+C + EA + + K P+ VTY++ ++ L
Sbjct: 346 FDTFA-ECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLC 404
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K G++ A LF A+ + G P+V+T N ++DALC + + +A+E+ M RG PNV+
Sbjct: 405 KSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVS 464
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PW-VLE 420
+YN LI CK KR++ +EM ++N +P+ +T+N L+ L K + W +
Sbjct: 465 SYNILINGYCKSKRIDEAMNLFEEMHRRN--LVPDSVTYNCLIDGLCKSGRISHAWELFN 522
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
M G + TYN++ +D K++H
Sbjct: 523 VMHDGGPPVDVITYNIL------FDAFSKIQHV 549
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 150/349 (42%), Gaps = 13/349 (3%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
F+AI D + R + + +P +V + ++L AI + + G
Sbjct: 56 FDAIDDAVALFTRLITM----HPLPSVVE---FNMILGSIVKMKHYPTAISLSKQMGLRG 108
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAK 277
+ L+ C H+ A + K + + T+ I+ G C+ G V +A
Sbjct: 109 ITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKAL 168
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
F ++ D VTY T +N L K G A L M + +P+VV N I+D L
Sbjct: 169 EFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGL 228
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
C + EA ++ ++ RG P+V TY LI C + + V L +M +N +
Sbjct: 229 CKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNL-- 286
Query: 398 NEITFNYLLKSLKKPEEVPWVLER---MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N T+N L+ +L K + + M G + T+N ++ Y ++ + R +
Sbjct: 287 NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLF 346
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + G+ PD SY ++I G R+++ALS F++M K + P T
Sbjct: 347 DTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVT 395
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 10/232 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P FN ++ VE ++FD PD+ +Y IL+ Y + ++EA
Sbjct: 321 PDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV---WSYNILIIGYCKNNRIDEA 377
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNG 266
+ +F++ ++ + +L+ LC+ + A E F ++ T NI+L+
Sbjct: 378 LSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDA 437
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C + V +A + + + P+ +Y +N K ++ A+ LF+ M + PD
Sbjct: 438 LCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPD 497
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
VT NC+ID LC RI A E+ M + G +V TYN L KI+ +
Sbjct: 498 SVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVN 187
R + WE F + +G SP +N +LD L + + + I++F+ M + N
Sbjct: 408 RISYAWE----LFSAI-HDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPN 462
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFF 246
+Y IL+N Y + ++EA+ +F+ + D + L+ LC+ + A E F
Sbjct: 463 VSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFN 522
Query: 247 ESEKNEFGYDIKTMNIILNGW 267
D+ T NI+ + +
Sbjct: 523 VMHDGGPPVDVITYNILFDAF 543
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 192/437 (43%), Gaps = 25/437 (5%)
Query: 82 FQRYPGDEIAINV--------QNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYR 133
QR P D + V +N ++ ++ K IE L C + ++ N++
Sbjct: 114 IQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANML---- 169
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKT 190
E A F + + G P +N ++ R + +++ EMP ++ +
Sbjct: 170 ---EKALRFLERMQLLG-IMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVS 225
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESE 249
Y ++ + E + V ++ ++ L D + L+ LC+++H + A F E++
Sbjct: 226 YYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQ 285
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K F D + I++ +C G + +AK ++ C PD VTY +N ++ G++G
Sbjct: 286 KRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVG 345
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A ++ Q M++ G KP+ V+ + LC K EA E+++ + + PN TY+ ++
Sbjct: 346 QARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVM 405
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
+ ++ + + EM K P + N LL+SL + +E +E G
Sbjct: 406 HGFRREGKLSDACDVVREMIGKGF--FPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMG 463
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
C ++ + ++ + D + ++M PD +YT +I L KGR+E+A
Sbjct: 464 CAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEAT 523
Query: 487 SYFHEMRLKGMVPEPRT 503
+M KG+ P P T
Sbjct: 524 ELTLKMLKKGIDPTPVT 540
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 170/375 (45%), Gaps = 11/375 (2%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT---Y 191
D A FF W R+ Y V+ +LDVL + + +V M ++T +
Sbjct: 62 DERVALDFFFWSDRQWRYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDF 121
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
++ Y+ A + A+ V ++ G +L + L +E A F E
Sbjct: 122 CCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLE-RMQ 180
Query: 252 EFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
G ++ T N ++ G+C L V +A ++ C PD V+Y T + L K ++
Sbjct: 181 LLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIR 240
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+ + + M + D VT N +I LC + EAL+ LRE + RG + Y++++
Sbjct: 241 EVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIV 300
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNG 426
CK RM+ E ++EM + C+P+ +T+ ++ + EV +L++M ++G
Sbjct: 301 DSYCKEGRMDQAKEIVNEMFTRG--CIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHG 358
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
CK +T +Y LK + R + E++ P+ +Y+V++HG +G+L DA
Sbjct: 359 CKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDAC 418
Query: 487 SYFHEMRLKGMVPEP 501
EM KG P P
Sbjct: 419 DVVREMIGKGFFPTP 433
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 164/350 (46%), Gaps = 9/350 (2%)
Query: 164 DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
++L +A RF+E +Q+ MP++V TY L+ Y H VE+A+ + G D
Sbjct: 167 NMLEKALRFLERMQLLGIMPNVV---TYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDK 223
Query: 224 SAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
++ ++ +LC+ + + EV + + E + D T N +++ C + EA +F ++
Sbjct: 224 VSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLRE 283
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
K + D V Y+ V++ K+G++ A + M+ +G PDVVT II+
Sbjct: 284 AQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGE 343
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ +A ++L++M GC PN +Y + +K LC+ E + E++ + PN IT+
Sbjct: 344 VGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWT--PNAITY 401
Query: 403 NYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
+ ++ + K + V+ M G + N++L+ D+ + EE
Sbjct: 402 SVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLN 461
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
G + ++T +IH + +E ALS +M L P+ T + D
Sbjct: 462 MGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIID 511
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 160/347 (46%), Gaps = 9/347 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP + ++ L + RR E++ V ++M D L ++ TY L++ +EA+
Sbjct: 220 SPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQ 279
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
++ G D + ++ C+ ++ A E E D+ T I+NG+
Sbjct: 280 FLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFS 339
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G V +A++ + + K C+P++V+Y F+ L +KG A + +A E+ P+ +
Sbjct: 340 QAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAI 399
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T + ++ + ++ +A +V+REM +G P N L++ LC+I R++ ++++E
Sbjct: 400 TYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEEC 459
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWD 445
N C N + F ++ + +++ +L+ M + TY I+
Sbjct: 460 --LNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKG 517
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
++ +M KKG+ P +Y +IH GR+ED L+ +M
Sbjct: 518 RIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKM 564
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 119/245 (48%), Gaps = 5/245 (2%)
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
+ + + ++ GKL A+++ M + G +P+++ CN I L + +AL L M+
Sbjct: 121 FCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQ 180
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KK 411
G +PNV TYN LIK C + R+E E + EM K C P+++++ ++ L ++
Sbjct: 181 LLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKG--CSPDKVSYYTVMGFLCKNRR 238
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
EV V+E+ME TYN ++ + D+ E +K+G D+ Y+
Sbjct: 239 IREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSA 298
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLG 531
++ +GR++ A +EM +G +P+ T + + + E G+ K + ++ G
Sbjct: 299 IVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHG 358
Query: 532 LKGNA 536
K N
Sbjct: 359 CKPNT 363
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 165/398 (41%), Gaps = 53/398 (13%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+ A F + + G + ++AI+D + R + ++ +EM PD+V T
Sbjct: 275 DEALQFLREAQKRG-FQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVV---T 330
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y ++N ++ A V +A + + + G + ++ L LC+ + A ++ +
Sbjct: 331 YTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASE 390
Query: 251 ------NEFGYDIKT------------------------------MNIILNGWCVLGNVY 274
N Y + +N++L C +G V
Sbjct: 391 EQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVD 450
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EAK+F ++ + C ++V + T ++ ++ + AL L M+ + PD VT II
Sbjct: 451 EAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTII 510
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
DAL K RI EA E+ +M +G P TY ++I +I R+E + LD+M +
Sbjct: 511 DALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQEC 570
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
FN +++ L E +L ++ R ++ +T +V+++ Y+
Sbjct: 571 ----RTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAY 626
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
M + + PD + + L +G+ E+A + F
Sbjct: 627 KVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLF 664
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 169/420 (40%), Gaps = 50/420 (11%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP 183
L+ +++R A F + G P ++ FN +LD L +A + Q+F M
Sbjct: 105 LLYKILSRSPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMR 164
Query: 184 DL---VNEKTYGILLNRYAAAHMVEEAIGVFD--RRKEFGELDDLSAFQNLLLWLCRYKH 238
D N TYGIL+ A V +A+ V D E D+ N++ LC+
Sbjct: 165 DASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGR 224
Query: 239 VEVAETFFES--------------------------------------EKNEFGYDIKTM 260
++ A F E EK + T+
Sbjct: 225 LQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTL 284
Query: 261 NIILNGWCVLGNVYEAKRFWKD--IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
N I+ G C +G V A F+++ + + ++VTY+T V A +G A+ LF M
Sbjct: 285 NTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEM 344
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
++G PD + +I L R+ +A + MK G + YN LI C+ KR+
Sbjct: 345 VDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRL 404
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLERMERNGCKMSTDTYN 435
YE L EM K P+ T+N LL L K + V +L +M GC+ S T+
Sbjct: 405 NEAYELLGEM--KEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFG 462
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++ Y D+ + M++ G+ P+ Y +I L A+ F EMR K
Sbjct: 463 TLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREK 522
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 19/281 (6%)
Query: 138 AAYTFFK-----WVSREGDYSPGSNVFNAILDV--LGRARRFVELIQVFDEMPDLVNEK- 189
AA FF+ W G+ S + A L +G A +++F EM D N
Sbjct: 299 AALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVA------MELFHEMVDEGNSPD 352
Query: 190 --TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFF 246
Y +++ A +++A + K+ G D A+ L+ CR K + E E
Sbjct: 353 AIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLG 412
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
E ++ D+ T N +L+G C G+ +I C P VT+ T ++ K G
Sbjct: 413 EMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVG 472
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
++ ALR+F++M E G +P+ V N +ID LC + A+E+ EM+ + NVTT+N
Sbjct: 473 QIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFN 532
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+L+K L E +E +D M + G C P+ +T + L++
Sbjct: 533 ALLKGLRDKNMPEKAFELMDLM--REGRCTPDYVTIDILME 571
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 116/250 (46%), Gaps = 11/250 (4%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D N +L+ G++ + + + + P+ VTY V L K G++G AL +
Sbjct: 136 DTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVL 195
Query: 316 QAMW--EKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE-MKN-RGCLPNVTTYNSLIKH 371
M E PDVV N I+D LC R+ +A++ + E M++ GC PN TYN L
Sbjct: 196 DGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHA 255
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE--RMERN---G 426
C+ + E + +ME++ + PN +T N ++ L V LE R +R
Sbjct: 256 FCRAGNVGMACELVAKMEKERVT--PNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPE 313
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ + TY+ ++ +++ + + EM +G PD Y MI GL GRL+DA
Sbjct: 314 ARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAW 373
Query: 487 SYFHEMRLKG 496
S M+ G
Sbjct: 374 SMATSMKKAG 383
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 188/419 (44%), Gaps = 26/419 (6%)
Query: 116 CELTLTD-DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE 174
C +T T+ +V ++ + +A F++ +R+ P + +N+++ +L ++ +
Sbjct: 155 CVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQ--PTAQAYNSMIIMLMHEGQYGK 212
Query: 175 LIQVFDEM-------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
+ ++++EM PD + TY L++ + + A + + KE G +
Sbjct: 213 VHELYNEMSTEGHCFPDTM---TYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYT 269
Query: 228 NLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
L+ + V A + FE ++++ D+ T ++ G G + EA F+ ++ +
Sbjct: 270 MLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQRE 329
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC-FKKRIPE 345
C PD+V +N L K G+L A++LFQ M P VVT N II AL K R E
Sbjct: 330 GCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASE 389
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
MK G P+ TY+ LI CK RME L+EM++K P + L
Sbjct: 390 VPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFP--PCPAAYCSL 447
Query: 406 LKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ +L K + E ++ N S Y V++K D + ++EM K G
Sbjct: 448 IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGC 507
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQG 521
PD +Y ++ GL G L++ALS M+ G +P+ +N NI L + G
Sbjct: 508 APDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD------INSYNIILNGLAKTG 560
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 189/438 (43%), Gaps = 48/438 (10%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
+ EKAL L + D +V + + FF+W ++ +Y ++ + A++ L
Sbjct: 76 DAEKALEVLMLRV-DHWLVREVMKTDIGVNVKMQFFRWAAKRRNYEHDTSTYMALIRCLE 134
Query: 168 RARRFVELIQVFDEMPD----LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
++ E+ ++ EM +V ++ A MV +AI +F + K
Sbjct: 135 VVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTA 194
Query: 224 SAFQNLLLWLCRY-KHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
A+ ++++ L ++ +V E + E S + D T + +++ +C LG A +
Sbjct: 195 QAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLN 254
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
++ ++ +P + Y + K + AL LF+ M + +PDV T +I L
Sbjct: 255 EMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAG 314
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
RI EA EM+ GC P+ N++I L K R++ + EM C+P+ +T
Sbjct: 315 RIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLR--CIPSVVT 372
Query: 402 FNYLLKSL----KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
+N ++K+L + EVP ERM+ +G S+ TY++++ + + +K EEM
Sbjct: 373 YNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEM 432
Query: 458 EKKGMGP-----------------------------------DQRSYTVMIHGLYDKGRL 482
++KG P R Y VMI L GRL
Sbjct: 433 DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRL 492
Query: 483 EDALSYFHEMRLKGMVPE 500
+DA++ F EM G P+
Sbjct: 493 DDAINMFDEMNKLGCAPD 510
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 146/327 (44%), Gaps = 31/327 (9%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY FF + REG P + V N +++ LG+A R + +++F EM P +V T
Sbjct: 319 AYHFFYEMQREG-CRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNT-- 375
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
I+ + + E F+R KE G + L+ C+ +E A E E +E
Sbjct: 376 IIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLE-EMDE 434
Query: 253 FGYDIKTMNIILNGWCVLGNVY-EAKRFWKDI-------IKSKCEPDSV-TYATFVNALT 303
G+ +C L + +AKR+ D+ +K C S YA + L
Sbjct: 435 KGFPP-----CPAAYCSLIDALGKAKRY--DLACELFQELKENCGSSSARVYAVMIKHLG 487
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K G+L A+ +F M + G PDV N ++ L + EAL +R M+ GC+P++
Sbjct: 488 KAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDIN 547
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLE 420
+YN ++ L K E L M+Q + P+ +++N +L +L EE ++E
Sbjct: 548 SYNIILNGLAKTGGPHRAMEMLSNMKQS--TVRPDVVSYNTVLGALSHAGMFEEAAKLME 605
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCE 447
M G + TY+ IL+ D E
Sbjct: 606 EMNTLGFEYDLITYSSILEAIGKVDHE 632
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 124/253 (49%), Gaps = 8/253 (3%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
DI T N+++NG C +G V +A I PD T+ T ++ K+ K+ A+ +
Sbjct: 397 DIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGIL 456
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+MW G PDV+T N I++ LC + + +E + + +GCLPN+ TYN LI+ LCK
Sbjct: 457 DSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKA 516
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG--CKMS 430
+++ + L+E+ +N +P+ ++F ++ +E + RME+ C +
Sbjct: 517 RKVTEALDLLEEI--RNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICH-T 573
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TYN+++ + D + + EM KG PD +Y VMI G G + +
Sbjct: 574 VATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLL 633
Query: 491 EMRLKGMVPEPRT 503
+ G VP T
Sbjct: 634 KEIEIGFVPSLTT 646
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 208/479 (43%), Gaps = 71/479 (14%)
Query: 89 EIAINVQN-ILKTCSVST------KGEIEKALN--------QCELTL-TDDLIVNVINRY 132
E+ +NV N +L+ VS KG++++A++ CE ++ + + I+N++ Y
Sbjct: 65 EMRLNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEY 124
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEK 189
+ + A+ + + EG +P F + R +R + +++ + MP +N
Sbjct: 125 GY-FNQAHKVYLRMKHEG-IAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAV 182
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
Y +++ + + EA +F++ G ++ F L+ LC+ H++ E
Sbjct: 183 VYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKV 242
Query: 250 -KNEFGYDIKTMNIILNGWCVLG-------NVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
KN ++ T NI + G C G V EA+ + ++ EPD TY T +
Sbjct: 243 LKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYG 302
Query: 302 LTKKGKL-----------------------------------GTALRLFQAMWEKGRKPD 326
+K GK+ AL LF+ KG KP
Sbjct: 303 YSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPS 362
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+V N +I L + + +AL+++ +M G P++ TYN +I LCK+ + L+
Sbjct: 363 IVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLN 422
Query: 387 EMEQKNGSCLPNEITFNYLL----KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
K LP+ TFN L+ K LK + +L+ M +G TYN IL
Sbjct: 423 AAIAK--GYLPDIFTFNTLIDGYCKRLKMDNAI-GILDSMWSHGVTPDVITYNSILNGLC 479
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ V T++ + +KG P+ +Y ++I L ++ +AL E+R +G++P+P
Sbjct: 480 KAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDP 538
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 166/389 (42%), Gaps = 15/389 (3%)
Query: 126 VNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL 185
V + +Y+ D A + F V +E + + +++ LG F + +V EM
Sbjct: 10 VAAVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLN 69
Query: 186 VN----EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
V+ E Y + Y V+EA+ VF+R + + ++ ++ L Y +
Sbjct: 70 VDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQ 129
Query: 242 AETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A + K+E D+ T I + +C A R ++ CE ++V Y T ++
Sbjct: 130 AHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVIS 189
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
++ A LF M G P + T N ++ LC K + E ++L ++ G P
Sbjct: 190 GFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCP 249
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQK-----NGSCLPNEITFN---YLLKSLKKP 412
N+ T+N I+ LC+ +E + E E N P++ T+N Y + K
Sbjct: 250 NLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKI 309
Query: 413 EEVPWVLERMERNGCKMSTDTY-NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
++ +L+ + G TY ++I+ + + D D +EE KG+ P Y
Sbjct: 310 QDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDI-DHALALFEEALGKGLKPSIVLYNT 368
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+I GL +G + AL ++M +GM P+
Sbjct: 369 LIKGLSQQGLVLKALQLMNDMSKEGMSPD 397
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 106/222 (47%), Gaps = 7/222 (3%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P +N+IL+ L +A + ++++ F + + L N TY IL+ A V EA+
Sbjct: 465 TPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALD 524
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF--GYDIKTMNIILNGW 267
+ + + G + D +F ++ C ++ A F + ++ + + T NI++N +
Sbjct: 525 LLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAF 584
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
++ A++ + ++ C+PDS TY ++ K G + + E G P +
Sbjct: 585 SEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSL 644
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN--VTTYNS 367
T +I+ LC + R+ EA+ ++ M G +P VT +++
Sbjct: 645 TTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVTIFDA 686
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 11/236 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
Y P FN ++D + + I + D M PD++ TY +LN A E
Sbjct: 429 YLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVI---TYNSILNGLCKAAKPE 485
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIIL 264
+ + F E G L ++ + L+ LC+ + V A E +N D + ++
Sbjct: 486 DVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVI 545
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSV-TYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+G+C G++ EA + ++ + + +V TY +NA ++K + A +LF M +KG
Sbjct: 546 SGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGC 605
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
PD T +ID C + + L + G +P++TT+ +I LC R+
Sbjct: 606 DPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVH 661
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 143 FKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLN 196
FK + +G P +N +++ L +AR+ E + + +E+ PD V ++G +++
Sbjct: 491 FKMIMEKGCL-PNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPV---SFGTVIS 546
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK-HVEVAETFFESEKNEFGY 255
+ ++EA +F R ++ + A N+++ K +++A+ F E + G
Sbjct: 547 GFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFH-EMGDKGC 605
Query: 256 DIK--TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
D T ++++G+C +GNV F I+ P T+ +N L + ++ A+
Sbjct: 606 DPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVG 665
Query: 314 LFQAMWEKGRKPDVVTCNCIIDA 336
+ M G P+ V I DA
Sbjct: 666 IVHLMVRTGVVPEAVV--TIFDA 686
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 174/401 (43%), Gaps = 29/401 (7%)
Query: 118 LTLTDDLIVNVINRYR---FDWEAAYTFFKWVSREGDYS--PGSNVFNAILDVLGRARRF 172
++ +DL V VIN YR +A TF+ R G++ P ++N +LD L +F
Sbjct: 104 ISCNEDLFVIVINAYRRAGLAEQALKTFY----RIGEFGCKPSVKIYNHVLDALLSENKF 159
Query: 173 VELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL 229
+ +++ M +N TY +LL V+ A + G + D ++ +
Sbjct: 160 QMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTV 219
Query: 230 LLWLCRYKHVEVAETFFESEKNEFGYDIKTM----NIILNGWCVLGNVYEAKRFWKDIIK 285
+ +CR VE E E IK+ N ++NG+C + E + ++
Sbjct: 220 VSSMCRLGKVE--------EARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAV 271
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+PD +TY+T +N L++ G + AL + M+ +G P+V T ++ R+ E
Sbjct: 272 EGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCE 331
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
AL++ M G PN YN+LI LC +M +ME +NG PNE T++ L
Sbjct: 332 ALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKME-RNG-VFPNETTYSTL 389
Query: 406 LKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ K ++ E +M NGC + Y ++ + + H E M
Sbjct: 390 IDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNC 449
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
P+ ++ I GL G+ E A+ ++MR G P T
Sbjct: 450 PPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTT 490
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 174/405 (42%), Gaps = 46/405 (11%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLV------------------------- 186
V+NA+++ R + E+ ++F+EM PD++
Sbjct: 245 VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKM 304
Query: 187 -------NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KH 238
N T+ L+ Y + EA+ +++R + G + A+ L+ LC Y K
Sbjct: 305 FLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKM 364
Query: 239 VEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
VE + E+N + T + +++G+ G++ A W +I + C P+ V Y
Sbjct: 365 VEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCM 424
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
V+ L + AL L + M P+ +T N I LC + A++VL +M+ GC
Sbjct: 425 VDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGC 484
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV 418
PNVTTYN ++ L KR + + E+E+ N +T+N +L
Sbjct: 485 APNVTTYNEVLDGLFNAKRTREALQIVGEIEEM--EIKSNLVTYNTILSGFCHAGMFKGA 542
Query: 419 LE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG-PDQRSYTVMIH 474
L+ ++ G K + TYN ++ Y + + KKG G PD +YT ++
Sbjct: 543 LQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLW 602
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERG 518
G+ + +++A+ + +M +G+ P T LV + KL G
Sbjct: 603 GVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLG 647
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 6/168 (3%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMV 204
R+ +P +N +LD L A+R E +Q+ E+ ++ N TY +L+ + A M
Sbjct: 480 RQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMF 539
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDIKTMNI 262
+ A+ + + G D + ++ C+ V+ A + ++K E D+ T
Sbjct: 540 KGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTS 599
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL-TKKGKLG 309
+L G C V EA +I P+ T+ V L +K G LG
Sbjct: 600 LLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLG 647
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 185/423 (43%), Gaps = 28/423 (6%)
Query: 104 STKGEIEKALNQC--ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNA 161
ST +I+ ++N + ++ V+N + A FF+WV ++ ++ F A
Sbjct: 31 STNPQIDNSVNPHFHSAVTQPEFLLRVLNSVKHRPLTALRFFRWVEKQPNFHRSETAFVA 90
Query: 162 ILDVLGR----------ARRFVELI---QVFDEMPDL-------VNEKTYGILLNRYAAA 201
ILD+L + + +E+ V D + + V+ K +L+ +A
Sbjct: 91 ILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQVFAKK 150
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTM 260
++E+ + VF + G L D+ +L L V EV E + K + I T
Sbjct: 151 LILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTF 210
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N +++ C G V A + C+P+ V+Y VN L+ KG+ A L + M
Sbjct: 211 NTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSM 270
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G K T N +I C K+ EA ++ REM RG LP V TYN+++ LC++ R+
Sbjct: 271 LGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSD 330
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLL---KSLKKPEEVPWVLERMERNGCKMSTDTYNVI 437
YLD M N +P+ +++N L+ L E + + S TYN +
Sbjct: 331 ARRYLDVM--VNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTL 388
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ D + ++M K G+ PD ++T+++ G G L A F EM +G+
Sbjct: 389 IDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGL 448
Query: 498 VPE 500
P+
Sbjct: 449 KPD 451
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 161/356 (45%), Gaps = 15/356 (4%)
Query: 154 PGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N +++ L G R ELI+ + V+ TY L+ + M EEA
Sbjct: 240 PNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEA--- 296
Query: 211 FDRRKEF---GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
D R+E G L + + ++ LCR V A + + NE D+ + N ++ G
Sbjct: 297 NDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYG 356
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ LGN EA + ++ P VTY T ++ + G L A + M + G PD
Sbjct: 357 YSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPD 416
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT ++ C +P A E+ EM +RG P+ Y + I K+ + +
Sbjct: 417 VVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKE 476
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM+ + P+ IT+N L+ L K ++ ++++M G TY I+ ++
Sbjct: 477 EMKAEGFP--PDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLI 534
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
K + +M KKG+ P +YTV+IH +GRL+ A YF EM+ KG+ P
Sbjct: 535 SGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSP 590
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 177/363 (48%), Gaps = 21/363 (5%)
Query: 154 PGSNVFNAILDVLGR------ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P +N I+ L R ARR+++++ D MPDLV +Y L+ Y+ EA
Sbjct: 310 PTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLV---SYNTLIYGYSRLGNFAEA 366
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNG 266
+ +F + + + + L+ CR ++++A+ + K+ D+ T I++ G
Sbjct: 367 LLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRG 426
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C +GN+ AK + +++ +PD + Y T + K G A + + M +G PD
Sbjct: 427 FCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPD 486
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI-KHLCK--IKRMETVYE 383
++T N +I+ LC +A E++++M+ G +P+ TY S+I HL +++ E V+
Sbjct: 487 LITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFS 546
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILKL 440
+M +K P+ +T+ L+ S + + + M+ G + TYN ++
Sbjct: 547 ---DMLKK--GIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYG 601
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ D + + EME KG+ P++ +YT++I+ + +DAL + +M + + P+
Sbjct: 602 LCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPD 661
Query: 501 PRT 503
T
Sbjct: 662 SCT 664
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 4/219 (1%)
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIIL 264
+A G+ + K G DL + L+ LC+ + + A + + E D T I+
Sbjct: 470 KAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSII 529
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ + G + +A+ + D++K P VTY +++ +G+L A + F M +KG
Sbjct: 530 HAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVS 589
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+V+T N +I LC + + A + EM+++G PN TY LI ++ + +
Sbjct: 590 PNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKL 649
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME 423
+M + P+ T + L+K L K ++ VL R+E
Sbjct: 650 YKDMLDR--EIKPDSCTHSALMKHLSKDYKLLAVL-RLE 685
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+VF +M P +V TY +L++ YA ++ A FD ++ G ++ + L+
Sbjct: 543 EVFSDMLKKGIHPSVV---TYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALI 599
Query: 231 LWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
LC+ ++VA F E E + T I++N L +A + +KD++ + +
Sbjct: 600 YGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIK 659
Query: 290 PDSVTYATFVNALTKKGKLGTALRL 314
PDS T++ + L+K KL LRL
Sbjct: 660 PDSCTHSALMKHLSKDYKLLAVLRL 684
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 207/497 (41%), Gaps = 68/497 (13%)
Query: 69 LVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELT-----LTDD 123
L S NS S + P + N+ N++ CS + AL E+ L
Sbjct: 89 LNQSQTNSISNSLYHLLPQTQNPNNIVNLI--CSNLKQHNSNLALLHTEVNALLPHLGAQ 146
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP 183
I V+ R + D A +FF WV + P + + I+ L +R F + I+ E+
Sbjct: 147 EISRVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELV 206
Query: 184 DLVNEKTYG----------------------ILLNRYAAAHMVEEAIGVFDRRKEFGELD 221
+LV + G +L+ Y V E + F R G +
Sbjct: 207 ELVKDDLPGEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVP 266
Query: 222 DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
+ LL L + + + E + E E+ ++ T NI+ + C G+ + +F
Sbjct: 267 TVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFL 326
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+ + + +PD VTY T +N+ +KG+L A L++ M+ +G PD+V+ +++ LC +
Sbjct: 327 EKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKE 386
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM------------ 388
R+ EA ++ M +RG P++ TYN+LI CK +M+ L +M
Sbjct: 387 GRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTC 446
Query: 389 ----------------------EQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERME 423
Q+ G + +I ++YL+ +L +P +LERM
Sbjct: 447 WVLVEGYGKEGKFLSALNLVVELQRFGVSISQDI-YSYLIVALCRENRPFAAKNLLERMS 505
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
++G K + YN ++K + DC + EM K + P+ +Y +J L R
Sbjct: 506 QDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSM 565
Query: 484 DALSYFHEMRLKGMVPE 500
+ S EM G +P+
Sbjct: 566 EGESLVGEMVASGXLPD 582
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 134/362 (37%), Gaps = 53/362 (14%)
Query: 101 CSVSTKGEIEKALNQCELTLTDDLIVN---VINRY--RFDWEAAYTFFKWVSREGDYSPG 155
C G++ K L + E D IV +IN Y + + A+ +K + R G P
Sbjct: 314 CKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRG-VVPD 372
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE--- 206
+ A+++ L + R E Q+F M PD+V TY L++ Y ++E
Sbjct: 373 LVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIV---TYNTLIHGYCKEGKMQESRS 429
Query: 207 --------------------------------AIGVFDRRKEFGELDDLSAFQNLLLWLC 234
A+ + + FG + L++ LC
Sbjct: 430 LLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALC 489
Query: 235 RYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
R A+ E ++ +++ N ++ +C + EA +++ + +P+
Sbjct: 490 RENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLA 549
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY + L++ + L M G PD+ C + C + I +A +L
Sbjct: 550 TYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFX 609
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
+ + ++N+LI+ + E D M + LPN +T Y++ L K
Sbjct: 610 AKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKM--GLLPNPLTCKYVIDGLWKAR 667
Query: 414 EV 415
V
Sbjct: 668 RV 669
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 164/352 (46%), Gaps = 13/352 (3%)
Query: 159 FNAILDVLGR------ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N +L L R A F+ + + P V +Y L+ A +A+G+
Sbjct: 81 YNTVLAALCRQGGCLDAALFLLRVMAHETRPTAV---SYTTLMRALCAERRTGQAVGLLR 137
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLG 271
+ G D+ + L+ LC V+ A E E ++ ++ + +L G+C G
Sbjct: 138 DMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAG 197
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ ++++ EPD V Y +++L ++GK+ A ++ M E+G +P+VVT N
Sbjct: 198 RWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYN 257
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I+++C + + EA+ + M +G + TYN+LI L + M+ L+EM
Sbjct: 258 VLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHG 317
Query: 392 NGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
PN +TFN ++ L K + V + M NGC + T+N+++ +
Sbjct: 318 ETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVK 377
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
K +EM G+ PD +Y+++I+G +++ A S +MR G+ PE
Sbjct: 378 KAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPE 429
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 193/445 (43%), Gaps = 59/445 (13%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
+AA + ++ E P + + ++ L RR + + + +M PD+V
Sbjct: 95 LDAALFLLRVMAHE--TRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVV--- 149
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFES 248
TYG L+ A V++A+ + E G ++ + LL C+ E V++ F E
Sbjct: 150 TYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEM 209
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
D+ +++ C G V +A + +++ EP+ VTY +N++ K+G +
Sbjct: 210 SGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSV 269
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL--PNVTTYN 366
A+ L M EKG D VT N +I L + EA+ +L EM + + PNV T+N
Sbjct: 270 KEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFN 329
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER-- 424
S+I LCK RM ++ D M + +C N +TFN L+ L + +V +E M+
Sbjct: 330 SVIHGLCKTGRMRQAFQVRDMMAENGCAC--NLVTFNLLIGGLLRVHKVKKAMELMDEMA 387
Query: 425 -NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP------------------- 464
+G + + TY++++ + D+ +M + G+ P
Sbjct: 388 SSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMME 447
Query: 465 ---------------DQRSYTVMIHG---LYDKGRLEDALSYFHEMRLKGMVPEPRTGIL 506
D +Y+ MIHG L D+ E+ + M +G++P+ T +
Sbjct: 448 QARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEE---FLKHMLDEGLIPDSVTYSM 504
Query: 507 VNDMNIKLKERGEQGKKVIKLTSLG 531
+ +M + G + + ++T+ G
Sbjct: 505 LINMFANSGDLGAAERVLKQMTASG 529
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 5/240 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D + N +L C G +A F ++ + P +V+Y T + AL + + G A+ L
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ M G +PDVVT +I LC + +A+E+LREM G PNV Y+ L++ CK
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
R E V + +EM + P+ + + L+ SL K ++ V+++M G + +
Sbjct: 197 GRWECVSKVFEEMSGRGIE--PDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TYNV++ + M +KG+ D +Y +I GL +++A+ EM
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 159/375 (42%), Gaps = 52/375 (13%)
Query: 171 RFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+ VEL++ E N Y LL Y A E VF+ G D+ + L+
Sbjct: 166 KAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLI 225
Query: 231 LWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
LCR V+ A + + E G + + T N+++N C G+V EA ++++
Sbjct: 226 DSLCREGKVKKATQVMD-KMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGV 284
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAM--WEKGRKPDVVTCNCIIDALCFKKRIPEA 346
D+VTY T + L+ ++ A+ L + M E +P+VVT N +I LC R+ +A
Sbjct: 285 ALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQA 344
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
+V M GC N+ T+N LI L ++ +++ E +DEM P+ T++ L+
Sbjct: 345 FQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLE--PDSFTYSILI 402
Query: 407 KSLKK---PEEVPWVLERMERNG----------------------------------CKM 429
K + +L +M R+G CK+
Sbjct: 403 NGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKL 462
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEE----MEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
Y+ + ++ C + R + EE M +G+ PD +Y+++I+ + G L A
Sbjct: 463 DVVAYSTM----IHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAA 518
Query: 486 LSYFHEMRLKGMVPE 500
+M G VP+
Sbjct: 519 ERVLKQMTASGFVPD 533
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 158/372 (42%), Gaps = 19/372 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
WE F+ +S G P ++ ++D L R + + QV D+M P++V
Sbjct: 199 WECVSKVFEEMSGRG-IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV--- 254
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY +L+N V+EA+ + + E G D + L+ L ++ A E
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314
Query: 249 --EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ ++ T N +++G C G + +A + + ++ C + VT+ + L +
Sbjct: 315 IHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVH 374
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
K+ A+ L M G +PD T + +I+ C ++ A +L +M+ G P + Y
Sbjct: 375 KVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYI 434
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERME 423
L+ LC+ ME + DEM + +C + + ++ ++ L+ + L+ M
Sbjct: 435 PLLAALCEQGMMEQARNFFDEMHK---NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHML 491
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G + TY++++ ++ N ++M G PD + +I G KG E
Sbjct: 492 DEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTE 551
Query: 484 DALSYFHEMRLK 495
L EM K
Sbjct: 552 KVLELIREMTAK 563
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 7/261 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
EA + + E P FN+++ L + R + QV D M + N T+ +
Sbjct: 306 EAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNL 365
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L+ H V++A+ + D G D + L+ C+ V+ AE+ + +
Sbjct: 366 LIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRD- 424
Query: 254 GYDIKTMNII--LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G + + ++ I L C G + +A+ F+ ++ K+ C+ D V Y+T ++ + +A
Sbjct: 425 GIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN-CKLDVVAYSTMIHGACRLRDRKSA 483
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ M ++G PD VT + +I+ + A VL++M G +P+V ++SLIK
Sbjct: 484 EEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKG 543
Query: 372 LCKIKRMETVYEYLDEMEQKN 392
E V E + EM K+
Sbjct: 544 YGAKGDTEKVLELIREMTAKD 564
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 175/381 (45%), Gaps = 20/381 (5%)
Query: 129 INRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVL------GRARRFVELIQVFDEM 182
+NR + W F+ R Y+ FN +++VL +A+ F+ ++
Sbjct: 194 LNRTQMAWVLYAEMFRMNIRSSLYT-----FNIMINVLCKEGKLKKAKEFIGHMETLGVK 248
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
P++V TY +++ + + A +F K+ G D + + + LC+ +E A
Sbjct: 249 PNVV---TYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEA 305
Query: 243 ETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ + + T N +++G+C G++ +A + ++I VTY F++A
Sbjct: 306 SGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHA 365
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L +G++G A + + M EKG PD VT N +I+ C A +L EM +G P
Sbjct: 366 LFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPT 425
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER 421
+ TY SLI L K RM+ +++Q+ LP+ I FN L+ + +
Sbjct: 426 LVTYTSLIYVLGKRNRMKEADALFSKIQQE--GLLPDIIVFNALIDGHCANGNIDRAFQL 483
Query: 422 M-ERNGCKMSTD--TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+ E + K+ D TYN +++ Y ++ R +EM+++G+ PD SY +I G
Sbjct: 484 LKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSK 543
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
+G ++DA EM G P
Sbjct: 544 RGDMKDAFRVRDEMMTTGFDP 564
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 160/333 (48%), Gaps = 12/333 (3%)
Query: 178 VFDEMP---DLVNEKT---YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
+FDE+ D V+ KT + +L+ Y EA+ F KE G + ++ +L
Sbjct: 130 IFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLS 189
Query: 232 WLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
+ ++A + E + + T NI++N C G + +AK F + +P
Sbjct: 190 LFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKP 249
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+ VTY T ++ +GK A +FQ M +KG +PD T N I LC + R+ EA ++
Sbjct: 250 NVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLI 309
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL- 409
+M G +PN TYN+LI C ++ Y Y DEM K + + +T+N + +L
Sbjct: 310 CKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISK--GIMASLVTYNLFIHALF 367
Query: 410 --KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+ + +++ M G T+N+++ Y + +EM KG+ P
Sbjct: 368 MEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLV 427
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+YT +I+ L + R+++A + F +++ +G++P+
Sbjct: 428 TYTSLIYVLGKRNRMKEADALFSKIQQEGLLPD 460
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 162/359 (45%), Gaps = 12/359 (3%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEK 189
R ++ A F+ + +G P +N+ + L + R E + +M + + N
Sbjct: 264 RGKFQRARVIFQTMKDKG-LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAV 322
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY L++ Y +++A D G + L + + L + A+ + E
Sbjct: 323 TYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIK-E 381
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E G D T NI++NG+C G+ A +++ +P VTY + + L K+ +
Sbjct: 382 MREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNR 441
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A LF + ++G PD++ N +ID C I A ++L+EM N LP+ TYN+
Sbjct: 442 MKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNT 501
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMER 424
L++ C+ ++E + LDEM+++ P+ I++N L+ K ++ V + M
Sbjct: 502 LMQGYCREGKVEEARQLLDEMKRR--GIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMT 559
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G + TYN +++ + +EM KG+ PD +Y +I + LE
Sbjct: 560 TGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 120/270 (44%), Gaps = 35/270 (12%)
Query: 240 EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
E E F+ ++ F +I+T N +L+ + L A + ++ + T+ +
Sbjct: 164 EALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMI 223
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
N L K+GKL A M G KP+VVT N II C + + A + + MK++G
Sbjct: 224 NVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLE 283
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
P+ TYNS I LCK R+E + +M + G +PN +T
Sbjct: 284 PDCYTYNSFISGLCKEGRLEEASGLICKMLE--GGLVPNAVT------------------ 323
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
YN ++ Y N DK +EM KG+ +Y + IH L+ +
Sbjct: 324 --------------YNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFME 369
Query: 480 GRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
GR+ DA + EMR KGM+P+ T IL+N
Sbjct: 370 GRMGDADNMIKEMREKGMMPDAVTHNILIN 399
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 174/381 (45%), Gaps = 16/381 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKT 190
EAA + G + P +N ++ L R+ + V D+ MP ++ T
Sbjct: 164 EAATQVLNRMKARG-FLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVI---T 219
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y IL+ + EA+ + + G L D+ + ++ +C+ VE A S
Sbjct: 220 YTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLT 279
Query: 251 NE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
++ D+ + NI+L + G E ++ ++ CEP+ VTY+ +++L + G++
Sbjct: 280 SKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRID 339
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+ + + M EK PD + + +I ALC + R+ A+ ++ M + GCLP++ YN+++
Sbjct: 340 EAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTIL 399
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
LCK E +++ + C PN ++N ++ +L ++ M G
Sbjct: 400 AALCKNGNANQALEIFNKL--RGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 457
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
TYN ++ ++ ++ME+ G P SY +++ GL R++DA+
Sbjct: 458 IDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 517
Query: 487 SYFHEMRLKGMVPEPRTGILV 507
F EM KG P T IL+
Sbjct: 518 GMFAEMIEKGCRPNETTYILL 538
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 163/371 (43%), Gaps = 45/371 (12%)
Query: 168 RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
+A R +E+++ E PD+ Y +++ + + +E A V +R K G L D+ +
Sbjct: 131 KASRVMEILESHTE-PDVF---AYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYN 186
Query: 228 NLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
++ LC + + +A T + + + T I++ V G + EA + ++++
Sbjct: 187 IMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLAR 246
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
PD TY + + K+G + A L ++ KG +PDV++ N ++ A + + E
Sbjct: 247 GLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEG 306
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK--------------- 391
+++ EM +RGC PN TY+ LI LC+ R++ L M +K
Sbjct: 307 EKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 366
Query: 392 ------------------NGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMS 430
+ CLP+ + +N +L +L K LE ++ GC +
Sbjct: 367 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 426
Query: 431 TDTYNVILKLYVNWDCEDKVRHTW--EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+YN ++ W C D+ R M KG+ PD+ +Y +I L G +E+A+
Sbjct: 427 VSSYNTMISAL--WSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGL 484
Query: 489 FHEMRLKGMVP 499
+M G P
Sbjct: 485 LDDMEQSGFRP 495
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 12/228 (5%)
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+N K GK +L + + KG PDV+ C +I K I +A V+ E+
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 142
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEE 414
P+V YN++I CK+ ++E + L+ M+ + LP+ +T+N ++ SL +K
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKAR--GFLPDIVTYNIMIGSLCNRRKLGL 200
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
VL+++ + C + TY ++++ + ++ EEM +G+ PD +Y +I
Sbjct: 201 ALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIR 260
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
G+ +G +E A + KG P+ V NI L+ QGK
Sbjct: 261 GMCKEGMVERAAELITSLTSKGCEPD------VISYNILLRAFLNQGK 302
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 168/355 (47%), Gaps = 15/355 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P ++N I+D L + + E + EM PD++ TY L+ + A + A
Sbjct: 270 PDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVI---TYSTLICGFCLAGQLMGA 326
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
+ + D+ + L+ LC+ ++ A+ E ++ T + +++G
Sbjct: 327 FSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDG 386
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C++G V+ AK+ + +++++ P +Y +N L K + A+ L + M K P+
Sbjct: 387 YCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPN 446
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VT N +ID LC RI AL++++E+ +RG +V TY SL+ LCK + ++
Sbjct: 447 TVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFM 506
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVN 443
+M+++ PN+ T+ L+ L K + + + + GC + TYNV++
Sbjct: 507 KMKERGIQ--PNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCK 564
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D+ +ME G PD ++ ++I L++K + A HEM KG++
Sbjct: 565 EGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 161/345 (46%), Gaps = 12/345 (3%)
Query: 166 LGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
+G R ++L+++ ++ PD+V Y +++ +V EA + G D
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVV---MYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPD 306
Query: 223 LSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ + L+ C + A + E D+ T I+++ C G + EAK
Sbjct: 307 VITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLG 366
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
+ K +P+ VTY+T ++ G++ A ++F AM + P V + N +I+ LC K
Sbjct: 367 VMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGK 426
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ EA+ +LREM ++ +PN TYNSLI LCK R+ + + + E+ + + IT
Sbjct: 427 SVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQP--ADVIT 484
Query: 402 FNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
+ LL L K + + + +M+ G + + TY ++ + ++ +
Sbjct: 485 YTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHIL 544
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
KG D +Y VMI GL +G L++AL+ +M G +P+ T
Sbjct: 545 VKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVT 589
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 129/257 (50%), Gaps = 7/257 (2%)
Query: 252 EFGYDIKT--MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ GY T + ++ G C+ G V ++ F ++ + + V+Y T +N L K G+
Sbjct: 195 KLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETR 254
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A++L + + ++ +PDVV N IID LC K + EA + EM +RG P+V TY++LI
Sbjct: 255 CAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLI 314
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
C ++ + L+EM KN + P+ T+ L+ +L K +E +L M + G
Sbjct: 315 CGFCLAGQLMGAFSLLNEMTLKNIN--PDVYTYTILIDALCKEGKLKEAKNLLGVMTKEG 372
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
K + TY+ ++ Y + + M + + P SY +MI+GL +++A+
Sbjct: 373 VKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAM 432
Query: 487 SYFHEMRLKGMVPEPRT 503
+ EM K +VP T
Sbjct: 433 NLLREMLHKNVVPNTVT 449
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 13/271 (4%)
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
V++A + ++ + P + + + +L K TA+ L + M KG +PD+VT +
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+I+ C ++ + VL ++ G PN +L+K LC ++ + D++ +
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232
Query: 393 GSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
N++++ LL L K E +L +E + YN I ++ C+DK
Sbjct: 233 FQM--NQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTI----IDGLCKDK 286
Query: 450 VRHT----WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
+ + + EM +G+ PD +Y+ +I G G+L A S +EM LK + P+ T
Sbjct: 287 LVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYT 346
Query: 506 LVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
++ D K + E + +T G+K N
Sbjct: 347 ILIDALCKEGKLKEAKNLLGVMTKEGVKPNV 377
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVE 205
+ + +P +N +++ L + + E + + EM + N TY L++ + +
Sbjct: 405 QTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRIT 464
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK------NEFGYDIKT 259
A+ + G+ D+ + +LL LC+ ++++ A F K N++ Y
Sbjct: 465 SALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY---- 520
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
+++G C + A++ ++ I+ C D TY + L K+G L AL + M
Sbjct: 521 -TALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKME 579
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ G PD VT II +L K +A ++L EM +G L
Sbjct: 580 DNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 155/359 (43%), Gaps = 47/359 (13%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+ T+GIL++ A + + + G D AF LL LC K A
Sbjct: 11 PDIA---TFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDA 67
Query: 243 ETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKS--KCEPDSVTYATF 298
E G D+ + + +L G C EA + + C PD V+Y+T
Sbjct: 68 MNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTV 127
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
++ K+G +G A LF M + G P+VVTCN +ID LC + + +A VL++M +
Sbjct: 128 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 187
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--------- 409
+PN TTYNSLI + L EM + PN +T+N L+ L
Sbjct: 188 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQR--PNVVTYNMLIDCLCKSGFHAEA 245
Query: 410 -----------KKPEEVPW------------------VLERMERNGCKMSTDTYNVILKL 440
KP+ + V + M +NG + + T+++ +
Sbjct: 246 REIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYA 305
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
Y D+ T+ +M++ G PD +YT +I GL GRL+DA+S F +M G+ P
Sbjct: 306 YCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSP 364
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 163/385 (42%), Gaps = 31/385 (8%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D AYT F + G P N+++D L + + + V +M D + N TY
Sbjct: 136 DVGKAYTLFCKMLDHG-IPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTY 194
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK-HVEVAETFFESEK 250
L++ Y ++ EA+ + G+ ++ + L+ LC+ H E E F +
Sbjct: 195 NSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQ 254
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ D T +L+G+ GN+ E ++++ + T++ + A K G+L
Sbjct: 255 SGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDE 314
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A F M + G PD+VT +ID LC R+ +A+ +M + G PN+ T+ +LI
Sbjct: 315 ASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIH 374
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEIT-FNYLLKSL---KKPEEVPWVLERMERNG 426
+ E E EM + +P ++T F ++ L K E + + M R G
Sbjct: 375 GFSMYGKWEKAEELFYEMMDRG---IPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAG 431
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY--------- 477
K + +YN ++ Y +V ++M G+ P ++ ++ G+
Sbjct: 432 AKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVD 491
Query: 478 ----------DKGRLEDALSYFHEM 492
+ GR+ED L+ F EM
Sbjct: 492 TCKTLIDSCCEDGRIEDILTLFREM 516
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 4/217 (1%)
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
K PD T+ ++ G L + + G + D V ++ LC KKR +A
Sbjct: 8 KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDA 67
Query: 347 LE-VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
+ VLR M GC P+V +Y++L+K LC K+ E E + M + +C P+ ++++ +
Sbjct: 68 MNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTV 127
Query: 406 LKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ K +V + +M +G + T N ++ DK ++M + +
Sbjct: 128 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 187
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
P+ +Y +IHG G+ +A+ EM G P
Sbjct: 188 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRP 224
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEK 189
R D EA+ TF K ++ + P + ++D L + R + + F +M D N
Sbjct: 311 RLD-EASLTFIKM--QQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNII 367
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-S 248
T+ L++ ++ E+A +F + G D++ F ++ L + V A+ F+
Sbjct: 368 TFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLM 427
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ ++ + N +++G+ + G V E + D++ +P +VT+ T
Sbjct: 428 PRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNT----------- 476
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
L M G KPDV TC +ID+ C RI + L + REM +
Sbjct: 477 -----LLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKA 520
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 156/306 (50%), Gaps = 10/306 (3%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNI 262
+++A+ F+R + + F LL + R K E + F E E Y++ T++I
Sbjct: 21 LDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSI 80
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++N +C L +V + +K +PD V + T ++ + + GK A L + M G
Sbjct: 81 LINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVG 140
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDVVTCN ++ C + +I + ++ M ++G P+V +Y+ I CK+++++
Sbjct: 141 CVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAM 200
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD--TYNVI 437
E DEM + +PN +T+N L+K+L +P + + +M C +S D Y+ +
Sbjct: 201 ELFDEMSHRG--VVPNAVTYNTLIKALCQALRPRDAQVLFRKM--CACGLSPDILAYSTL 256
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
L + D++ ++EM+++ + PD YT++I+G+ +++DA + ++G+
Sbjct: 257 LDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGL 316
Query: 498 VPEPRT 503
P+ T
Sbjct: 317 KPDVHT 322
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 161/359 (44%), Gaps = 11/359 (3%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
FN +L + R +++ ++ +F EM N T IL+N + H V+ VF +
Sbjct: 43 FNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTL 102
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G D+ F L+ +CR E+A + E G D+ T N ++ G+C G +
Sbjct: 103 KRGFKPDVVIFTTLIDGVCRIGKTELAAGLLK-EMGLVGCVPDVVTCNSLMRGYCSQGKI 161
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+ ++ + ++ +PD +Y+ F+N K K+ A+ LF M +G P+ VT N +
Sbjct: 162 DKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTL 221
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I ALC R +A + R+M G P++ Y++L+ CK ++ + EM+++
Sbjct: 222 IKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLV 281
Query: 394 SCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
P+ + + ++ + +K ++ VL R+ G K TY ++ +
Sbjct: 282 K--PDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEA 339
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
+ +ME+ G P SY V++ G + HEM +G + T + D
Sbjct: 340 LRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFLKD 398
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
GN+ +A + ++ +P + + ++++ + K T + LF+ M +G K +V T
Sbjct: 18 FGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCT 77
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ +I+ CF + V + RG P+V + +LI +C+I + E L EM
Sbjct: 78 LSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMG 137
Query: 390 QKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
C+P+ +T N L++ S K ++V + M G K +Y++ + Y +
Sbjct: 138 LVG--CVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEK 195
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D+ ++EM +G+ P+ +Y +I L R DA F +M G+ P+
Sbjct: 196 IDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPD 249
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 11/200 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+ A F +S G P + +N ++ L +A R + +F +M PD++
Sbjct: 197 DEAMELFDEMSHRG-VVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDIL---A 252
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y LL+ + ++E + +F + DL + ++ +CR + V+ A+
Sbjct: 253 YSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLI 312
Query: 251 NE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
E D+ T +++G C G++ EA R ++ + + C P S +Y + +
Sbjct: 313 VEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTS 372
Query: 310 TALRLFQAMWEKGRKPDVVT 329
T ++L M ++G D VT
Sbjct: 373 TVVQLIHEMADRGFYADAVT 392
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 166/361 (45%), Gaps = 14/361 (3%)
Query: 151 DYSPG--SNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMV- 204
D +PG + + A++ RA RF + + VF M D + TY ++L+ Y+ +
Sbjct: 147 DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPW 206
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV--EVAETFFESEKNEFGYDIKTMNI 262
+E + + KE G D + N L+ CR + + E A+ F E + + F D T N
Sbjct: 207 KEVVELVASMKEHGVAPDRYTY-NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNS 265
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+L+ + EA +++ + C P VTY + +++ K G L A+ L Q M KG
Sbjct: 266 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 325
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
KPDVVT +I L +I A+ EM GC PN+ TYN+LIK + +
Sbjct: 326 MKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 385
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILK 439
DE ++ +P+ +T+N LL + EV V + M++ G DTY ++
Sbjct: 386 AVFDEF--RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 443
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
Y D ++ M + G+ PD +Y ++ L GR E A F EM + P
Sbjct: 444 SYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 503
Query: 500 E 500
+
Sbjct: 504 D 504
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 187/449 (41%), Gaps = 84/449 (18%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PD 184
R R ++ A F + G + P FN++LDV G+ARR E I+V EM P
Sbjct: 236 RRRALYKEAAQVFDEMKASG-FEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPS 294
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL----------- 233
+V TY L++ Y ++E+A+ + + G D+ + L+ L
Sbjct: 295 VV---TYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIV 351
Query: 234 --------------CRY-----------KHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
C Y K E+ F E F DI T N +L +
Sbjct: 352 EYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFG 411
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G E +K++ K+ P+ TY + +++ ++ G A+++++ M E G PDV
Sbjct: 412 QNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVS 471
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE- 387
T N ++ AL R +A ++ EM+ R C P+ +Y+SL+ KR++ + D+
Sbjct: 472 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDI 531
Query: 388 --------------------------------MEQKNGSCLPNEITFNYLLKSLKK---P 412
+E + C + N ++ K
Sbjct: 532 YSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMV 591
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNW-DCEDKVRHTWEEMEKKGMGPDQRSYTV 471
+V +L M+ + +S TYN ++ +Y DCE K + E++ G+ PD+ SY
Sbjct: 592 RKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE-KCENILTEIKSSGVRPDRYSYNT 650
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+I+ KG++++A F EM+ G+ P+
Sbjct: 651 VIYAYGRKGQMKEASRLFSEMKCSGLKPD 679
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 152/373 (40%), Gaps = 49/373 (13%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
+T +++++V ++ W+ + G +P +N ++ R + E QVF
Sbjct: 190 VTYNVVLHVYSKMAVPWKEVVELVASMKEHG-VAPDRYTYNTLISCCRRRALYKEAAQVF 248
Query: 180 DEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
DEM PD V T+ LL+ Y A
Sbjct: 249 DEMKASGFEPDKV---TFNSLLDVYGKAR------------------------------- 274
Query: 234 CRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+H E E E E+ + T N +++ + G + +A +++ +PD V
Sbjct: 275 ---RHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 331
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY T ++ L + GK+ A+ + M G KP++ T N +I + + PE + V E
Sbjct: 332 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF 391
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP- 412
++ G +P++ T+N+L+ + V EM K +P T+ L+ S +
Sbjct: 392 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM--KKAGYIPERDTYVSLISSYSRCG 449
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+ + +RM G TYN +L ++ + EME++ PD+ SY+
Sbjct: 450 LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYS 509
Query: 471 VMIHGLYDKGRLE 483
++H + RL+
Sbjct: 510 SLLHAYANAKRLD 522
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 123 DLIVNVINRYR----FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
D V++I+ Y FD A +K + G Y P + +NA+L L R R+ + ++
Sbjct: 436 DTYVSLISSYSRCGLFDL--AMQIYKRMMEAGIY-PDVSTYNAVLSALARGGRWEQAEKL 492
Query: 179 FDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD-------------------- 212
F EM PD E +Y LL+ YA A +++ + D
Sbjct: 493 FAEMEERDCKPD---EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLV 549
Query: 213 ---------RRKEFGELD------DLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYD 256
K F EL D++ ++ + + V E K +
Sbjct: 550 NSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLS 609
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
T N +++ + LG+ + + +I S PD +Y T + A +KG++ A RLF
Sbjct: 610 AATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFS 669
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M G KPDVVT N + + EA+E++R M +GC PN TYNS+++ C+
Sbjct: 670 EMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNG 729
Query: 377 RMETVYEYLDEMEQ 390
++ ++ + Q
Sbjct: 730 KLTDAKIFVSNLPQ 743
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 149/345 (43%), Gaps = 9/345 (2%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
R + P +N +L V G+ E+ VF EM + TY L++ Y+ +
Sbjct: 392 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 451
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
+ A+ ++ R E G D+S + +L L R E AE F E E+ + D + + +
Sbjct: 452 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 511
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L+ + + + K DI + EP + T V +K L A + F + +K
Sbjct: 512 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 571
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
D+ N ++ + + + ++L MK + TYNSL+ ++ E
Sbjct: 572 SLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCEN 631
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
L E+ K+ P+ ++N ++ + + +E + M+ +G K TYN+ +K
Sbjct: 632 ILTEI--KSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKS 689
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
YV+ ++ M +G P++R+Y ++ G G+L DA
Sbjct: 690 YVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 734
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 51/266 (19%)
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
AT + + + G+L A A+ + PD ++ A R +A+ V R M +
Sbjct: 127 ATAIRVMARAGRLAEA----SALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVD 182
Query: 356 RGCLPNVTTYNSLIKHLCKIK--------------------------------RMETVY- 382
G P + TYN ++ K+ R +Y
Sbjct: 183 SGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYK 242
Query: 383 ---EYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNV 436
+ DEM K P+++TFN LL ++ +E V++ MER GC S TYN
Sbjct: 243 EAAQVFDEM--KASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNS 300
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ YV ++ +EME KGM PD +YT +I GL G+++ A+ + EM G
Sbjct: 301 LISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 360
Query: 497 MVPEPRTGILVNDMNIKLKERGEQGK 522
P T N +K G +GK
Sbjct: 361 CKPNLCT------YNALIKMHGVRGK 380
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 22/163 (13%)
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
RE+ G L + + I+ + + R+ LD P+ + L+ +
Sbjct: 112 RELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPG------PDAGAYTALVSAFS 165
Query: 411 KP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE-------MEKK 460
+ + V RM +G + + TYNV+L +Y K+ W+E M++
Sbjct: 166 RAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVY------SKMAVPWKEVVELVASMKEH 219
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G+ PD+ +Y +I + ++A F EM+ G P+ T
Sbjct: 220 GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVT 262
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 176/393 (44%), Gaps = 48/393 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD----LVNEKTYGILLNRYAAAHMVEEAIG 209
P ++ ++ +L R+ R + +++FD+M D L + + + A +++ A+
Sbjct: 109 PSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVT 168
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGW 267
+ + +FG + A+ NLL L + A FES + + D + N+++ G
Sbjct: 169 LLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGV 228
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDS----------------------------------- 292
C +GN +A + + + C PD+
Sbjct: 229 CRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPN 288
Query: 293 -VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
VTY + ++ K G++ AL ++ M E G +P+ VT N +I+ + A+ + R
Sbjct: 289 VVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYR 348
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-- 409
++ R C P+V T++SLI C+ +++ EM Q + PN TF+ ++ SL
Sbjct: 349 QLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQ--PNVYTFSIIIHSLCK 406
Query: 410 --KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+ E + ++ E R T YN ++ + ++ +ME+KG PD+
Sbjct: 407 QNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKY 466
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+YT++I G KGR+ +A++ FH+M G P+
Sbjct: 467 TYTILIIGHCMKGRIPEAITLFHKMVETGCRPD 499
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 154/312 (49%), Gaps = 20/312 (6%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+A F W+ ++G YSP FN ++ + R F + +++ + M PD + T
Sbjct: 200 DAVALFESWI-QDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTI---T 255
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGE-LDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
+ IL++ A V + R + G + ++ + +++ C+ +E A + + ++
Sbjct: 256 HNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVY-ND 314
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E G + T N+++NG+ ++ A R ++ +I +C PD VT+++ ++ + G+
Sbjct: 315 MLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQ 374
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL-PNVTTYN 366
L A+R+++ M + +P+V T + II +LC + R EAL LRE+ R + P YN
Sbjct: 375 LDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYN 434
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERME 423
+I LCK ++E + +ME+K C P++ T+ L+ +P + +M
Sbjct: 435 PVIDILCKGGQVEEANLIVTDMEEKG--CHPDKYTYTILIIGHCMKGRIPEAITLFHKMV 492
Query: 424 RNGCKMSTDTYN 435
GC+ T N
Sbjct: 493 ETGCRPDKITVN 504
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 124/261 (47%), Gaps = 6/261 (2%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
T+T +++V+ + R + + + + R+G P + +++ +A R + + V
Sbjct: 253 TITHNILVDGLCRAK-QVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSV 311
Query: 179 FDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+++M + N TY +L+N Y A +E A+ ++ + D+ F +L+ CR
Sbjct: 312 YNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCR 371
Query: 236 YKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI-IKSKCEPDSV 293
++ A + E ++ ++ T +II++ C EA F +++ +++ P +
Sbjct: 372 CGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTF 431
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
Y ++ L K G++ A + M EKG PD T +I C K RIPEA+ + +M
Sbjct: 432 IYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKM 491
Query: 354 KNRGCLPNVTTYNSLIKHLCK 374
GC P+ T NS I + K
Sbjct: 492 VETGCRPDKITVNSFISCVLK 512
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 90/196 (45%), Gaps = 13/196 (6%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
T+T ++++N + D E+A ++ + P F++++D R + + +++
Sbjct: 324 TVTYNVLINGYGK-ALDMESAVRMYRQLILR-RCPPDVVTFSSLIDGYCRCGQLDDAMRI 381
Query: 179 FDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA----FQNLLL 231
+ EM N T+ I+++ + EA+G +E D++ + ++
Sbjct: 382 WKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFL---RELNMRADIAPQTFIYNPVID 438
Query: 232 WLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
LC+ VE A + E+ D T I++ G C+ G + EA + ++++ C P
Sbjct: 439 ILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRP 498
Query: 291 DSVTYATFVNALTKKG 306
D +T +F++ + K G
Sbjct: 499 DKITVNSFISCVLKAG 514
>gi|334183970|ref|NP_177858.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332197845|gb|AEE35966.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 402
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 176/382 (46%), Gaps = 30/382 (7%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI 193
D + A +F W+SR ++ + +++ +L E+P V + T I
Sbjct: 38 LDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCS-----------QEIPYEVPKIT--I 84
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLS--------AFQNLLLWLCRYKHVE-VAET 244
L+ + + + V +A+ V D + + D + NLL L R+ VE +
Sbjct: 85 LMIK--SCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRL 142
Query: 245 FFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
+ E ++ DI T N ++NG+C LG V EAK++ +I++ C+PD TY +F+ +
Sbjct: 143 YTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCR 202
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
+ ++ A ++F+ M + G + V+ +I L K+I EAL +L +MK+ C PNV T
Sbjct: 203 RKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRT 262
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLER 421
Y LI LC + +M + P++ + L++S +E +LE
Sbjct: 263 YTVLIDALCGSGQKSEAMNLFKQMSESGIK--PDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M NG + TYN ++K + + K +M ++ + PD +Y +I G G
Sbjct: 321 MLENGLMPNVITYNALIKGFCKKNVH-KAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGN 379
Query: 482 LEDALSYFHEMRLKGMVPEPRT 503
L+ A M G+VP RT
Sbjct: 380 LDSAYRLLSLMEESGLVPNQRT 401
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 25/217 (11%)
Query: 329 TCNCIIDAL-----CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
+CN + DAL C R ++ E+ ++ + YN+L+ L + +E +
Sbjct: 89 SCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPK-------CYNNLLSSLARFGLVEEMKR 141
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKS-------LKKPEEVPWVLERMERNGCKMSTDTYNV 436
EM + S P+ TFN L+ ++ + V W+++ GC TY
Sbjct: 142 LYTEMLEDLVS--PDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQA----GCDPDYFTYTS 195
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ + D ++EM + G ++ SYT +I+GL++ ++++ALS +M+
Sbjct: 196 FITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDN 255
Query: 497 MVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLK 533
P RT ++ D ++ E +++ G+K
Sbjct: 256 CCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIK 292
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 173/354 (48%), Gaps = 23/354 (6%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMV---------EEAIG 209
N +L+VL + +RF + +F +++++GI N + +V E A
Sbjct: 158 LNTLLNVLIQNQRFDLVHAMFKN-----SKESFGITPNIFTCNLLVKALCKKNDIESAYK 212
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWC 268
V D G + +L + +L +E A+ E + Y D T ++++G+C
Sbjct: 213 VLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYC 272
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
LG EA D+ K++ EP+ VTY + AL K+ K G A +F M E+ PD
Sbjct: 273 KLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSS 332
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
C +IDALC ++ EA + R+M C+P+ ++LI LCK R+ + DE
Sbjct: 333 LCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF 392
Query: 389 EQKNGSCLPNEITFNYLLKSL-KKPE--EVPWVLERMERNGCKMSTDTYNVILK-LYVNW 444
E+ GS +P+ +T+N L+ + +K E E + + M CK + TYNV+++ L N
Sbjct: 393 EK--GS-IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNG 449
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ ++ VR EEM + G P++ ++ ++ GL G+ EDA+ + G V
Sbjct: 450 NVKEGVR-VLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV 502
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 164/361 (45%), Gaps = 25/361 (6%)
Query: 150 GDYSPG----SNVFNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAA 200
G PG + +++IL L RAR F + + ++ P E + LL Y
Sbjct: 73 GKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGL 132
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIK 258
A E ++ +F R +FG + + LL L + + ++ F++ K FG +I
Sbjct: 133 AGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIF 192
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N+++ C ++ A + +I P+ VTY T + +G + +A R+ + M
Sbjct: 193 TCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 252
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
++G PD T ++D C R EA V+ +M+ PN TY +I+ LCK K+
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN 435
DEM ++ S +P+ ++ +L K +E + +M +N C N
Sbjct: 313 GEARNMFDEMLER--SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD----N 366
Query: 436 VILKLYVNWDCED----KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
+L ++W C++ + R ++E E KG P +Y +I G+ +KG L +A + +
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 492 M 492
M
Sbjct: 426 M 426
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 165/359 (45%), Gaps = 11/359 (3%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P + F++++D LG+ R + ++++M D + Y L+ + E+
Sbjct: 471 TPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHK 530
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGW 267
++ G DL+ + + + E F E N G+ D ++ +I+++G
Sbjct: 531 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFR-EINAHGFIPDARSYSILIHGL 589
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
G E + + + C D+ Y ++ K GK+ A +L + M KG P V
Sbjct: 590 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 649
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT +ID L R+ EA + E K+ G NV Y+SLI K+ R++ Y ++E
Sbjct: 650 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 709
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNW 444
+ QK + PN T+N LL +L K EE+ L + M+ C + TY++++
Sbjct: 710 LMQKGLT--PNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRV 767
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+K W+EM+K G+ P+ +YT MI GL G + +A F + G +P+ +
Sbjct: 768 RKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSAS 826
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 163/370 (44%), Gaps = 48/370 (12%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK-----TY 191
+ ++ FF + G P + +++ VL +A R E +++F+++ N K Y
Sbjct: 282 DMSWKFFHEMKSHG-LMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQ--NRKVPCAYAY 338
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
++ Y +A +EA G+ +R+K G + + A+ +L L + + VE A FE K
Sbjct: 339 NTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR 398
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ ++ T NI+++ C ++GKL A
Sbjct: 399 DAVPNVPTYNILIDMLC-----------------------------------REGKLNAA 423
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L + M G P+V+T N +ID LC +++ EA + M ++ C PN T++SLI
Sbjct: 424 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 483
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCK 428
L K R++ Y ++M + +P I + L++S K E+ + + M GC
Sbjct: 484 LGKCGRVDDAYSLYEKM--LDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCS 541
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
N + +K R + E+ G PD RSY+++IHGL G +
Sbjct: 542 PDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYEL 601
Query: 489 FHEMRLKGMV 498
F+ M+ +G V
Sbjct: 602 FYAMKEQGCV 611
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 181/455 (39%), Gaps = 81/455 (17%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM 182
+L++ V+ R + D A +F+W ++ + +N++L V+ R F L ++ +EM
Sbjct: 93 ELVIGVLKRLK-DANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHLERILEEM 151
Query: 183 P----------------------------DLVNE----------KTYGILLNRYAAAHMV 204
D++ Y IL+ +
Sbjct: 152 SLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREP 211
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
+ + +F + +E G ++ F L+ R V+ A + E + N DI N+
Sbjct: 212 DPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVC 271
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE--- 320
++ + G V + +F+ ++ PD VTY + + L K +L A+ LF+ + +
Sbjct: 272 IDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRK 331
Query: 321 --------------------------------KGRKPDVVTCNCIIDALCFKKRIPEALE 348
KG P V+ NCI+ L K+R+ EAL
Sbjct: 332 VPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALR 391
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ EMK R +PNV TYN LI LC+ ++ E D+ME+ PN +T N ++
Sbjct: 392 IFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMER--AGLFPNVLTVNIMIDR 448
Query: 409 L---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L +K EE + E M+ C + T++ ++ D +E+M G P
Sbjct: 449 LCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPG 508
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
YT +I + GR ED + EM G P+
Sbjct: 509 AIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 543
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 159/365 (43%), Gaps = 46/365 (12%)
Query: 153 SPGSNVFNAILDVLGRA------RRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
SP + N +D + +A R I +PD ++Y IL++ A + E
Sbjct: 541 SPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPD---ARSYSILIHGLVKAGLANE 597
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIIL 264
+F KE G + D A+ ++ C+ V A E K + G+ + T ++
Sbjct: 598 TYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVK-GHPPTVVTYGSVI 656
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G + + EA +++ + + + V Y++ ++ K G++ A + + + +KG
Sbjct: 657 DGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 716
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+V T NC++DAL + I EAL + MK+ C PN TY+ LI LC++++ + +
Sbjct: 717 PNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVF 776
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
EM QK G PN IT+ ++ L K + +E +G
Sbjct: 777 WQEM-QKLG-LKPNTITYTTMISGLAKAGNI------LEASG------------------ 810
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTG 504
+ + G PD SY MI GL + DA + F E RLKG +T
Sbjct: 811 --------LFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTC 862
Query: 505 ILVND 509
+++ D
Sbjct: 863 VVLLD 867
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 85/188 (45%), Gaps = 14/188 (7%)
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+L EM G P+ L+ + K +++ ++ + M + P + L+ +
Sbjct: 147 ILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFR--PAFSAYTILIGA 204
Query: 409 L---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L ++P+ + + +M+ G +++ + +++++ D +EM+ + D
Sbjct: 205 LSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDAD 264
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-----GILVN----DMNIKLKE 516
Y V I G+++ + +FHEM+ G++P+ T G+L D ++L E
Sbjct: 265 IVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFE 324
Query: 517 RGEQGKKV 524
+ EQ +KV
Sbjct: 325 QLEQNRKV 332
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 170/352 (48%), Gaps = 20/352 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV-EE 206
P ++ + A++ L RA RF + + VF M P LV TY ++L+ Y+ + +E
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALV---TYNVVLHVYSKIAVPWKE 230
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV--EVAETFFESEKNEFGYDIKTMNIIL 264
+ + D ++ G D + N L+ CR + + E A+ F E F D T+N +L
Sbjct: 231 VLALVDSMRKDGIPLDRYTY-NTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLL 289
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ + EA K++ + C P VTY + +++ K G L A +L + M KG +
Sbjct: 290 DVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIE 349
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK-HLCKIKRMETVYE 383
PDV+T ++ L +I A+ EM GC PN+ TYN+LIK H + K E +
Sbjct: 350 PDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIV 409
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKL 440
+ DE+ ++ +P+ +T+N LL + EV V + M+++G DTY ++
Sbjct: 410 F-DEI--RSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISS 466
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
Y D+ ++ M + G+ PD +Y ++ L GR E A F EM
Sbjct: 467 YSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEM 518
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 193/462 (41%), Gaps = 91/462 (19%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
T + +++ R EAA F + R + P N++LDV G+ARR+ E I V
Sbjct: 249 TYNTLISCCRRRALYKEAAKVFDEM--RAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLK 306
Query: 181 EM-----------------------------------------PDLVNEKTYGILLNRYA 199
EM PD++ TY L++
Sbjct: 307 EMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVI---TYTTLVSGLD 363
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLL-LWLCRYKHVEVAETFFESEKNEFGYDIK 258
A ++ AIG ++ G +L + L+ L R K E+ F E F D+
Sbjct: 364 RAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVV 423
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N +L + G E +K++ KS P+ TY + +++ ++ G A+ +++ M
Sbjct: 424 TWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRM 483
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC---KI 375
E G PD+ T N ++ AL R +A ++ EM+N P+ +Y+SL+ K+
Sbjct: 484 IEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKL 543
Query: 376 KRMETVYE--YLDEMEQKNG----------------------------SCLPNEITFNYL 405
+M+++ E Y + +E NG C + N +
Sbjct: 544 DKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAM 603
Query: 406 LK------SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW-DCEDKVRHTWEEME 458
+ +KK EE+ L M+ + +ST TYN ++ +Y DCE K + E++
Sbjct: 604 ISIYGKNGMVKKVEEI---LSLMKESSINLSTATYNSLMHMYSRLGDCE-KCENILTEIK 659
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
PD+ SY MI+ KG++++A F EM+ G+VP+
Sbjct: 660 SSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPD 701
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 138/322 (42%), Gaps = 42/322 (13%)
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
D SA+ L+ L R A F N + T N++L+ + + ++
Sbjct: 175 DASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLAL 234
Query: 281 KDIIKSKCEP-DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
D ++ P D TY T ++ ++ A ++F M G +PD VT N ++D
Sbjct: 235 VDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGK 294
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+R EA+ VL+EM+ GC P+V TYNSLI K +E + +EME K P+
Sbjct: 295 ARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKG--IEPDV 352
Query: 400 ITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLY--------------- 441
IT+ L+ L + ++ + M RNGCK + TYN ++KL+
Sbjct: 353 ITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDE 412
Query: 442 ----------VNWDC----------EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
V W+ + +V ++EM+K G P++ +Y +I G
Sbjct: 413 IRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGL 472
Query: 482 LEDALSYFHEMRLKGMVPEPRT 503
+ A+ + M G+ P+ T
Sbjct: 473 FDQAMEIYKRMIEAGIHPDIST 494
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 8/216 (3%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP--EA 346
+PD+ Y ++AL++ + A+ +F+ M G P +VT N ++ K +P E
Sbjct: 173 DPDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYS-KIAVPWKEV 231
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
L ++ M+ G + TYN+LI + + + DEM + P+++T N LL
Sbjct: 232 LALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEM--RAAGFEPDKVTLNSLL 289
Query: 407 KSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
K +E VL+ ME+ GC S TYN ++ YV ++ EEME KG+
Sbjct: 290 DVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIE 349
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
PD +YT ++ GL G+++ A+ ++EM G P
Sbjct: 350 PDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKP 385
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 133/311 (42%), Gaps = 46/311 (14%)
Query: 123 DLIVNVINRYR----FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
D V++I+ Y FD A +K + G + P + +NA+L L R R+ + ++
Sbjct: 458 DTYVSLISSYSRCGLFDQ--AMEIYKRMIEAGIH-PDISTYNAVLSALARGGRWEQAEKL 514
Query: 179 FDEMPDL---VNEKTYGILLNRYAAA---------------HMVEEAIGVF--------- 211
F EM +L +E +Y LL+ YA A +E G+
Sbjct: 515 FAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSK 574
Query: 212 -----DRRKEFGELD------DLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKT 259
D K F EL D++ ++ + V+ V E +++ T
Sbjct: 575 VNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTAT 634
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N +++ + LG+ + + +I S+ PD +Y T + A +KG++ A RLF M
Sbjct: 635 YNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMK 694
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
G PD+VT N + + EA++++R M GC PN TYN++++ C R+
Sbjct: 695 CSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIA 754
Query: 380 TVYEYLDEMEQ 390
++ + +
Sbjct: 755 DGKSFISNLPE 765
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 150/365 (41%), Gaps = 15/365 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEK-TYGILLNRYAAAHMV 204
R + P +N +L V G+ E+ VF EM V E+ TY L++ Y+ +
Sbjct: 414 RSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLF 473
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
++A+ ++ R E G D+S + +L L R E AE F E E + D + + +
Sbjct: 474 DQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSL 533
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L+ + + + K +DI + E + T V +K L + F + +
Sbjct: 534 LHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRC 593
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
D+ N +I + + E+L MK + TYNSL+ ++ E
Sbjct: 594 SLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCEN 653
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
L E+ K+ P+ ++N ++ + + +E + M+ +G TYN+ +K
Sbjct: 654 ILTEI--KSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKS 711
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
YV ++ M G P++R+Y ++ GR+ D S+ + PE
Sbjct: 712 YVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSFISNL------PE 765
Query: 501 PRTGI 505
GI
Sbjct: 766 LHPGI 770
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 148/321 (46%), Gaps = 9/321 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY IL++ AH E A+ F + G D +LL C K + A
Sbjct: 115 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHR 174
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNALTKK 305
E G D+ + NI+L C G +A + + + + C PD V Y T ++ K+
Sbjct: 175 TPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKE 234
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G + A LF+ M ++G PD+VT + ++ ALC + + +A LR+M N+G LP+ TY
Sbjct: 235 GDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTY 294
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
N+LI + + EM ++ S LP+ + N L+ SL K +E V + M
Sbjct: 295 NNLIYGYSSTGQWKEAVRVFKEMRRQ--SILPDVVALNTLMGSLCKYGKIKEARDVFDTM 352
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G +Y ++L Y C + ++ M G+ PD ++ V+I + G L
Sbjct: 353 AMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGML 412
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
+ A+ F+EMR G+ P T
Sbjct: 413 DKAMIIFNEMRDHGVKPHVVT 433
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 168/355 (47%), Gaps = 17/355 (4%)
Query: 157 NVFNAILDVLGRARR--FVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAI 208
+VF+ + + G A + V++ +FD M PD+ T+ +L+ YA M+++A+
Sbjct: 360 DVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY---TFNVLIKAYANCGMLDKAM 416
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGW 267
+F+ ++ G + + ++ LCR ++ A E F + D + ++ G+
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G++ +AK +I+ + D V + + +N L K G++ A +F G PD
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 536
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
V N ++D C ++ +AL V M + G PNV Y +L+ CKI R++ E
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596
Query: 388 MEQKNGSCLPNEITFNYLLKSL-KKPEEVPWVLE--RMERNGCKMSTDTYNVILKLYVNW 444
M QK P+ I +N ++ L + VP ++ M +G M+ TY+++L+
Sbjct: 597 MLQKGIK--PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKN 654
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
C D+ ++E+ + D + MI G++ R+E+A F + G+VP
Sbjct: 655 RCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 171/429 (39%), Gaps = 53/429 (12%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N ++D + + +F EM PDLV TY +++ A +++
Sbjct: 218 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLV---TYSSVVHALCKARAMDK 274
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILN 265
A + G L D + NL+ E F E + D+ +N ++
Sbjct: 275 AEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMG 334
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G + EA+ + + PD +Y +N KG L LF M G P
Sbjct: 335 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 394
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T N +I A + +A+ + EM++ G P+V TY ++I LC+I +M+ E
Sbjct: 395 DIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKF 454
Query: 386 DEMEQKNGSCLPNEITFNYLLKS-------LKKPEEVPWVLERMER-----------NGC 427
++M + +P++ ++ L++ LK E + ++ R N C
Sbjct: 455 NQMIDQ--GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 512
Query: 428 KMS--------------------TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
K+ YN+++ Y +K ++ M G+ P+
Sbjct: 513 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 572
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKL 527
Y +++G GR+++ LS F EM KG+ P + IL N + L E G +K
Sbjct: 573 GYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP---STILYNIIIDGLFEAGRTVPAKVKF 629
Query: 528 TSLGLKGNA 536
+ G A
Sbjct: 630 HEMTESGIA 638
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 164/376 (43%), Gaps = 21/376 (5%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
R+ P + ++ L R + + ++ F++M D G++ ++YA +++
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMID------QGVVPDKYAYHCLIQGF 476
Query: 208 I--GVFDRRKEF-------GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDI 257
G + KE G D+ F +++ LC+ V A+ F+ N D
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 536
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
N++++G+C++G + +A R + ++ + EP+ V Y T VN K G++ L LF+
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M +KG KP + N IID L R A EM G N TY+ +++ L K +
Sbjct: 597 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 656
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTY 434
+ E+ N + IT N ++ + ++ EE + + R+G TY
Sbjct: 657 FDEAIFLFKELRAMNVKI--DIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTY 714
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++++ + ++ + M+ G PD R ++ L K + A +Y ++
Sbjct: 715 SIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDE 774
Query: 495 KGMVPEPRTGILVNDM 510
+ E T +L+ D+
Sbjct: 775 RNFSLEHLTAMLLVDL 790
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 17/258 (6%)
Query: 107 GEIEKALNQCELTLTDDLIVNVI------NRY----RFDWEAAYTFFKWVSREGDYSPGS 156
G++EKAL + ++ + NV+ N Y R D + F+ + ++G P +
Sbjct: 550 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID--EGLSLFREMLQKG-IKPST 606
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
++N I+D L A R V F EM + +N+ TY I+L +EAI +F
Sbjct: 607 ILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE 666
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGN 272
+ D+ ++ + + + VE A+ F S ++ T +I++ G
Sbjct: 667 LRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGL 726
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
V EA+ + + + CEPDS V L KK ++ A + E+ + +T
Sbjct: 727 VEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAML 786
Query: 333 IIDALCFKKRIPEALEVL 350
++D K E + L
Sbjct: 787 LVDLFSSKGTCREQIRFL 804
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 156/323 (48%), Gaps = 14/323 (4%)
Query: 176 IQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+Q +E+P V TY L++ A EA + + G + D+ + L+ C+
Sbjct: 45 VQDAEEVPTAV---TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 101
Query: 236 YKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS-KCEPDSV 293
K + A FE F D+ T + +++G C G + EA + +IKS C P++V
Sbjct: 102 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 161
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY + ++ + GK+ A+ L + M E G PDVVT +++ C R+ +A ++L +M
Sbjct: 162 TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 221
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK-- 411
+G PNV T+ SL+ LC+ R+ L EM +K SC P T+N +L +
Sbjct: 222 TRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRK--SCSPTVYTYNTILDGYCRVN 279
Query: 412 --PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
E ++LE M+ C + ++N++++ + + EE ++ PD Y
Sbjct: 280 QLEEARKFMLEEMD---CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 336
Query: 470 TVMIHGLYDKGRLEDALSYFHEM 492
T +I L + ++++A + +M
Sbjct: 337 TTVIDVLCREKKVDEACRVYRKM 359
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 165/349 (47%), Gaps = 29/349 (8%)
Query: 144 KWVSREG--------DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
+W R G + P + +N+++ L +A R E + +EM PD+
Sbjct: 34 RWPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIF--- 90
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY L+ + + ++A+ VF++ G D+ + L+ LC+ ++ A F
Sbjct: 91 TYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 150
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ + T N +++G+C +G + EA + + ++ PD VTY T +N K +
Sbjct: 151 IKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLAR 210
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L A L M KG P+VVT ++D LC + R+ +A+ +L EM+ + C P V TYN+
Sbjct: 211 LDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNT 270
Query: 368 LIKHLCKIKRMETVYEY-LDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERME 423
++ C++ ++E ++ L+EM+ C PN ++FN +++ L K E ++E
Sbjct: 271 ILDGYCRVNQLEEARKFMLEEMD-----CPPNVVSFNIMIRGLCKVNRSSEAMELVEEAR 325
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM-EKKGMGPDQRSYTV 471
R C Y ++ + D+ + +M E+ G P+ +Y+
Sbjct: 326 RRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYST 374
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 4/213 (1%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P +VTY + ++ L K + A L + M G PD+ T +I C K+ +AL V
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS- 408
++ RG P+V TY+ LI LCK R++ + M K+GSC+PN +T+N L+
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM-IKSGSCMPNTVTYNSLISGF 170
Query: 409 --LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
+ K +E +LERM G TY ++ + D +M +KG+ P+
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++T ++ GL + RL DA+ EMR K P
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 263
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 112/238 (47%), Gaps = 13/238 (5%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F + + G P + +N+++ R + E + + + M PD+V TY
Sbjct: 143 AIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV---TYT 199
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKN 251
L+N + +++A + ++ G ++ F +L+ LCR + + E +
Sbjct: 200 TLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRK 259
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N IL+G+C + + EA++F + + C P+ V++ + L K + A
Sbjct: 260 SCSPTVYTYNTILDGYCRVNQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEA 317
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM-KNRGCLPNVTTYNSL 368
+ L + + PDVV +ID LC +K++ EA V R+M + GCLPN TY++
Sbjct: 318 MELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 164/348 (47%), Gaps = 7/348 (2%)
Query: 168 RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
+ARR VEL + N TYG++++ + + + +F G ++ +
Sbjct: 59 QARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYS 118
Query: 228 NLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
+L+ LCR + E F E ++ T N +++ C G EA R + ++
Sbjct: 119 SLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGE 178
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
PD VT+ T ++ L+KKGK+ A ++F+ M ++G P++VT N +++ LC ++ A
Sbjct: 179 GILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHA 238
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
+ + M RG +V +YN+LI C + E +M+ + + P+ T+ LL
Sbjct: 239 VRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELT--PSITTYTILL 296
Query: 407 KSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
K+L + + E M+ G S DTY V+L C ++ + ++
Sbjct: 297 KALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYK 356
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
P R Y+++I G++ R E A+ F E+ G+VP T I++N +
Sbjct: 357 PSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGL 404
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 166/346 (47%), Gaps = 18/346 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N+++ R + E + F +M PD+V T+ L++ + V+EA +F+
Sbjct: 152 YNSLIHASCRFGLWKEATRTFSQMVGEGILPDVV---TFTTLIDHLSKKGKVQEAYKIFE 208
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLG 271
+ GE ++ + +LL LC + ++ A FE + D+ + N ++NG+C G
Sbjct: 209 LMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSG 268
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
EA ++ + + P TY + AL + G++ TA LF M G+ P + T
Sbjct: 269 KTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYT 328
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
++D LC I EA++V R +K+ P++ Y+ LI + + +R E+ E DE+
Sbjct: 329 VLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTV 388
Query: 392 NGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
+PN +T+N ++ L K E + +ME +GC+ ++N I++ ++ +
Sbjct: 389 --GLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQ 446
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLY--DKGRLEDALSYFHEM 492
K + M +K P+ S T+M+ LY D E ++ HE+
Sbjct: 447 KAMEFLKRMREKNFSPND-SVTLMLVNLYAADAQSSELPNNFLHEL 491
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 164/345 (47%), Gaps = 9/345 (2%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+ ++D L + ++ +++F EM ++ N Y L+N + EA+ +FD
Sbjct: 82 YGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMV 141
Query: 216 EFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVY 274
G ++ + +L+ CR+ E TF + D+ T +++ G V
Sbjct: 142 SQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQ 201
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA + ++ +IK P+ VTY + +N L ++ A+RLF+ M E+G K DV++ N +I
Sbjct: 202 EAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLI 261
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C + EA+ + R+M+ P++TTY L+K L + R+ T E + M+ S
Sbjct: 262 NGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQS 321
Query: 395 CLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
P+ T+ LL L K EE V ++ K S Y++++ +
Sbjct: 322 --PSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAM 379
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++E+ G+ P+ +Y +MI+GL +G+L +A F +M G
Sbjct: 380 EIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESG 424
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 127/290 (43%), Gaps = 36/290 (12%)
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
K+ + ++ T++ ++ G C G V +A + + +S + D + Y +NAL K +
Sbjct: 2 KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+ L + M + + T +ID+LC + L++ REM N G PNV Y+SLI
Sbjct: 62 RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121
Query: 370 KHLCKIKRMETVYEYLDEMEQK-------------NGSC--------------------L 396
LC++ ++ DEM + + SC L
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181
Query: 397 PNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
P+ +TF L+ L K +E + E M + G + TYN +L D
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+E M ++G+ D SY +I+G G+ E+A++ F +M+ + + P T
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITT 291
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 13/227 (5%)
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+KS +P+ VT +T V + +GK+ AL LF M G + D++ +I+AL ++
Sbjct: 1 MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCK----IKRMETVYEYLDEMEQKNGSCLPNE 399
A+E+ R M + C N TY +I LCK IK ++ E ++ G C PN
Sbjct: 61 RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINM-----GIC-PNV 114
Query: 400 ITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
I ++ L+ L K E + + M G K + TYN ++ + + T+ +
Sbjct: 115 IVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQ 174
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
M +G+ PD ++T +I L KG++++A F M +G P T
Sbjct: 175 MVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVT 221
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 136/268 (50%), Gaps = 9/268 (3%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
+ AY F+ + ++G+ +P +N++L+ L + +++F+ M + ++ +Y
Sbjct: 201 QEAYKIFELMIKQGE-APNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNT 259
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFFES-EKN 251
L+N Y + EEA+ +F R+ ++ EL ++ + LL L + + A+ F + +
Sbjct: 260 LINGYCTSGKTEEAMTLF-RKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQIC 318
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T ++L+G C G + EA ++ + K +P Y+ + + + + +A
Sbjct: 319 GQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESA 378
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ +F + G P++VT N +I+ LC + ++ EA + +M+ GC + ++N +I+
Sbjct: 379 MEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRG 438
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ +++ E+L M +KN S PN+
Sbjct: 439 FLQENQVQKAMEFLKRMREKNFS--PND 464
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 193/424 (45%), Gaps = 26/424 (6%)
Query: 116 CELTLTD-DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVE 174
C +T T+ +V ++ + +A F++ +R+ P + +N+++ +L ++ +
Sbjct: 155 CVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQ--PTAQAYNSMIIMLMHEGQYEK 212
Query: 175 LIQVFDEM-------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
+ ++++EM PD + TY L++ + + AI + + K+ G +
Sbjct: 213 VHELYNEMSTEGHCFPDTM---TYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYT 269
Query: 228 NLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
L+ + V A + FE ++++ D+ T ++ G G + EA F+ ++ +
Sbjct: 270 MLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQRE 329
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC-FKKRIPE 345
C PD++ +N L K G+L A++LFQ M P VVT N II AL K R E
Sbjct: 330 GCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASE 389
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
MK G P+ TY+ LI CK RME L+EM++K P + L
Sbjct: 390 VPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFP--PCPAAYCSL 447
Query: 406 LKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ +L K + E ++ N S+ Y V++K D + ++EM K G
Sbjct: 448 IDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGC 507
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
PD +Y ++ GL G L++ALS M+ G +P+ +N NI L +Q
Sbjct: 508 APDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD------INSYNIILNGLQKQED 561
Query: 523 KVIK 526
+++
Sbjct: 562 LIVQ 565
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 184/439 (41%), Gaps = 50/439 (11%)
Query: 108 EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG 167
+ EKAL L + D +V I + FF+W ++ +Y ++ + A++ L
Sbjct: 76 DAEKALEVLMLRV-DHWLVREIMKTDIGVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLE 134
Query: 168 RARRFVELIQVFDEMPD----LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
++ E+ ++ EM +V ++ A MV +AI +F + K
Sbjct: 135 VVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTA 194
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGY---DIKTMNIILNGWCVLGNVYEAKRFW 280
A+ ++++ L E + E G+ D T + +++ +C LG A +
Sbjct: 195 QAYNSMIIMLMHEGQYEKVHELYNEMSTE-GHCFPDTMTYSALISAFCKLGRRDSAIQLL 253
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
++ + +P + Y V K + AL LF+ M + +PDV T +I L
Sbjct: 254 NEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKA 313
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
RI EA EM+ GC P+ N++I L K R++ + EM C+P+ +
Sbjct: 314 GRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEM--GTLRCIPSVV 371
Query: 401 TFNYLLKSL----KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
T+N ++K+L + EVP ERM+ +G S+ TY++++ + + +K EE
Sbjct: 372 TYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEE 431
Query: 457 MEKKGMGP-----------------------------------DQRSYTVMIHGLYDKGR 481
M++KG P R Y VMI L GR
Sbjct: 432 MDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGR 491
Query: 482 LEDALSYFHEMRLKGMVPE 500
L+DA++ F EM G P+
Sbjct: 492 LDDAINMFDEMNKLGCAPD 510
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 175/394 (44%), Gaps = 43/394 (10%)
Query: 151 DYSPGSNVFNAILDV---LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
+ +P ++A+LD LG+ ++Q ++ N T+ ++N YA M+ +A
Sbjct: 456 NLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 515
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM-NIILNG 266
+ V + + + + L+ + +VA+ F + K+ + + +I+LN
Sbjct: 516 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNN 575
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK----- 321
+G + EA+ D+ +PD V YA+ ++ K+G AL + Q M EK
Sbjct: 576 LKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFD 635
Query: 322 -----------------------------GRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
G PD +T N II+ C K + +AL++L E
Sbjct: 636 VVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNE 695
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
MK+ G +PN TYN LI LCK +E LDEM +P IT +L+K+ +
Sbjct: 696 MKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVM--EFVPTPITHKFLVKAYSRS 753
Query: 413 EEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
E+ +L E++ +G ++S YN ++ ++ K + +EM K+G+ D +Y
Sbjct: 754 EKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTY 813
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+I G +E AL + +M + G+ P T
Sbjct: 814 NALIRGYCTGSHVEKALKTYSQMFVDGIAPNITT 847
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 138/282 (48%), Gaps = 6/282 (2%)
Query: 223 LSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
L + L+ C++ VE + + ++ N D+ T + IL G+C G + EA ++
Sbjct: 321 LVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFR 380
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
++ + +P+ V+YAT +N+L K G++ A L M +G D+VTC ++D L
Sbjct: 381 EMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVG 440
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ EA EV + PN TY++L+ CK+ +ME L +ME+++ PN IT
Sbjct: 441 KTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVP--PNVIT 498
Query: 402 FNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME 458
F+ ++ K + VL M + +T Y +++ Y +D +EM+
Sbjct: 499 FSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMK 558
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ + + ++++ L GR+++A S +M KG+ P+
Sbjct: 559 SRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPD 600
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 185/444 (41%), Gaps = 56/444 (12%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
E +++ +K + G P ++IL R + E +F EM ++ N +Y
Sbjct: 338 EESHSLYKKMIMNG-IMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYAT 396
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNE 252
++N + V EA + + G D+ ++ L + + AE FE+ K
Sbjct: 397 IINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLN 456
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ T + +L+G+C LG + A+ + + K P+ +T+++ +N KKG L A+
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAV 516
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKK------------------------------- 341
+ + M ++ P+ + +ID FK
Sbjct: 517 DVLREMVQRNVMPNTIVYAILIDGY-FKAGEQDVADDFCKEMKSRRLEESNVIFDILLNN 575
Query: 342 -----RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
R+ EA ++ +M ++G P++ Y SLI K + EM++KN
Sbjct: 576 LKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRF- 634
Query: 397 PNEITFNYLLKSLKK--PEEVPWVLERMERNGCKMSTDTYNVILKLY-VNWDCEDKVRHT 453
+ + +N L+K L + + +V RM G TYN I+ Y + ED +
Sbjct: 635 -DVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDAL-DI 692
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
EM+ G+ P+ +Y ++I GL G +E A S EM + VP P T + +K
Sbjct: 693 LNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPIT----HKFLVK 748
Query: 514 LKERGEQGKKVI----KLTSLGLK 533
R E+ K++ KL + GL+
Sbjct: 749 AYSRSEKADKILQIHEKLVASGLE 772
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 142/333 (42%), Gaps = 25/333 (7%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-S 248
T IL+ Y +V+ A V + G D+ L+ C + A E S
Sbjct: 199 TCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENS 258
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKR-------FWKDIIKSK------------CE 289
+++ DI T N +L +C G++ A+ FWKD + K +
Sbjct: 259 WRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQ 318
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P VTY T + A K + + L++ M G PDVVTC+ I+ C ++ EA +
Sbjct: 319 PTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVL 378
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
REM G PN +Y ++I L K R+ + +M + S + +T ++ L
Sbjct: 379 FREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISF--DIVTCTTVMDGL 436
Query: 410 ---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K +E V E + + + TY+ +L Y + ++MEK+ + P+
Sbjct: 437 FKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNV 496
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+++ +I+G KG L A+ EM + ++P
Sbjct: 497 ITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 529
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 142/378 (37%), Gaps = 61/378 (16%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYG 192
RFD A K + R G Y P R +EL PD + TY
Sbjct: 633 RFDVVAYNALIKGLLRLGKYDPRY-----------VCSRMIEL----GLAPDCI---TYN 674
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
++N Y E+A+ + + K +G + +
Sbjct: 675 TIINTYCIKGKTEDALDILNEMKSYGIMPNAV---------------------------- 706
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
T NI++ G C G V +A+ +++ + P +T+ V A ++ K L
Sbjct: 707 ------TYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKIL 760
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
++ + + G + + N +I C +A VL EM RG ++ TYN+LI+
Sbjct: 761 QIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGY 820
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP-------EEVPWVLERMERN 425
C +E + +M + PN T+N LL L EE ++ M
Sbjct: 821 CTGSHVEKALKTYSQMFVDGIA--PNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNER 878
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G + TY++++ Y K EM KG P ++Y V+I G++ +A
Sbjct: 879 GLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEA 938
Query: 486 LSYFHEMRLKGMVPEPRT 503
+++ KG +P T
Sbjct: 939 RELLNDLLTKGRIPNSFT 956
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 156/357 (43%), Gaps = 24/357 (6%)
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
LL ++ A+ +V + ++ G + D+ + L+ LC+ +++A + + +
Sbjct: 100 LLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNN-DVV 158
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
D T N ++ G+C G V + +++K DS+T V + G + A
Sbjct: 159 DIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEW 218
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+ + + G DV+ N +ID C + +A E++ ++ TYN+L+K C
Sbjct: 219 VMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFC 278
Query: 374 K---IKRMETVYEYL-----DEMEQKNGSCL---------PNEITFNYLLKSLKK---PE 413
K + R E+++ + DE KN + P +T+ L+ + K E
Sbjct: 279 KTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVE 338
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
E + ++M NG T + IL + + + EM + G+ P+ SY +I
Sbjct: 339 ESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATII 398
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKL---KERGEQGKKVIKL 527
+ L+ GR+ +A + +M ++G+ + T V D K+ KE E + ++KL
Sbjct: 399 NSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKL 455
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 5/184 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
Y L+ + M +A V D + G DL + L+ C HVE A +T+ +
Sbjct: 777 VYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQM 836
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE----PDSVTYATFVNALTK 304
+ +I T N +L G G + E + ++ E P++ TY V+ +
Sbjct: 837 FVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGR 896
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
G + L M KG P + T N +I ++ EA E+L ++ +G +PN T
Sbjct: 897 VGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFT 956
Query: 365 YNSL 368
Y+ L
Sbjct: 957 YDIL 960
>gi|356564752|ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 544
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 167/370 (45%), Gaps = 40/370 (10%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
V+N L++L + R + I +F E+ ++ T+ IL+ A V+EA +
Sbjct: 180 VYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDEAFELLGDM 239
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE--KNEFGYDIKTMNIILNGWCVLGN 272
FG D+ + LL LCR V+ A E K EF ++ + +++G+C L
Sbjct: 240 GSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSK 299
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+ EA + ++++S +P+ T++ V+ K G + +AL + + + G P+V+T
Sbjct: 300 MDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFHGCAPNVITLTS 359
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+I+ C + L++ REM R N+ TY+ LI LCK R++ E +N
Sbjct: 360 LINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQ---------EARN 410
Query: 393 GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
LL+ LK+ + VP YN ++ Y D+
Sbjct: 411 ------------LLRILKQSDIVPLAF-------------VYNPVIDGYCKSGNIDEANA 445
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNI 512
EME+K PD+ ++T++I G KGR +A+ F++M G P+ T ++ +
Sbjct: 446 IVAEMEEK-CKPDKLTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPDDITIRTLSSCLL 504
Query: 513 KLKERGEQGK 522
K GE +
Sbjct: 505 KSGMPGEAAR 514
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 128/278 (46%), Gaps = 9/278 (3%)
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ LL LC+ A+ ++S +++ D + + +++ + + +K +
Sbjct: 111 YNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRFDVSKELLAEAQ 170
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
S + D + Y F+N L K +L A+ LF+ + D T N +I LC +
Sbjct: 171 CSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVD 230
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC--LPNEITF 402
EA E+L +M + GC P++ TYN L+ LC+I +++ + L+E+ K C PN +++
Sbjct: 231 EAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLK---CEFAPNVVSY 287
Query: 403 NYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
++ L K +E + M R+G K + T++ ++ +V +++
Sbjct: 288 TTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILF 347
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
G P+ + T +I+G G + L + EM + +
Sbjct: 348 HGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNI 385
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 8/259 (3%)
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
F E+ + T N++L C G AK + + PDS V++
Sbjct: 97 FTRERLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALA 156
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE-MKNRGCLPNVTT 364
+ + L G + DV+ N ++ L R+ +A+ + RE M++ CL + T
Sbjct: 157 DRFDVSKELLAEAQCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCL-DAFT 215
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER 424
+N LI+ LC ++ +E L +M + C P+ +T+N LL L + ++V + +E
Sbjct: 216 FNILIRGLCTAGDVDEAFELLGDM--GSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEE 273
Query: 425 N--GCKMSTD--TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
C+ + + +Y ++ Y D+ + EM + G P+ +++ ++ G G
Sbjct: 274 VCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAG 333
Query: 481 RLEDALSYFHEMRLKGMVP 499
+ AL ++ G P
Sbjct: 334 DMASALGMHKKILFHGCAP 352
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 61/135 (45%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
N TY +L++ ++ ++EA + K+ + + ++ C+ +++ A
Sbjct: 387 ANLYTYSVLISALCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAI 446
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ + D T I++ G C+ G EA + ++ S C PD +T T + L K
Sbjct: 447 VAEMEEKCKPDKLTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPDDITIRTLSSCLLKS 506
Query: 306 GKLGTALRLFQAMWE 320
G G A R+ + ++E
Sbjct: 507 GMPGEAARIKETLFE 521
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 164/350 (46%), Gaps = 11/350 (3%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAET 244
VN T+ IL+ + + EAIG+ + K+F D ++ +L LC+ + E +
Sbjct: 210 VNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDL 269
Query: 245 FFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
+ + N + T NI+++G+C LG + EA + + ++ PD TY + L K
Sbjct: 270 LLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCK 329
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK-KRIPEALEVLREMKNRGCLPNVT 363
GK+ A RL M PDVVT N +I+ CF + E++ +M+ +G PN
Sbjct: 330 DGKIDEAFRLKDEMENLKLLPDVVTYNTLING-CFDCSSSLKGFELIDKMEGKGVKPNAV 388
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLE 420
TYN ++K K +M+ L +ME+ S P+ +TFN L+ K E +++
Sbjct: 389 TYNVVVKWYVKEGKMDNAGNELRKMEESGFS--PDCVTFNTLINGYCKAGRLSEAFRMMD 446
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
M R G KM++ T N IL D K+G D+ SY +I G + G
Sbjct: 447 EMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDG 506
Query: 481 RLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSL 530
+ +A+ + EM+ K ++P + I N M L G+ + + KL L
Sbjct: 507 KSVEAMKLWDEMKEKEIIP---SIITYNTMIGGLCHSGKTDQSIDKLNEL 553
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 172/393 (43%), Gaps = 12/393 (3%)
Query: 120 LTDDLIVNVINRY--RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
LT + ++N + RY + + F V + G +N FN ++ + E I
Sbjct: 175 LTCNTLINALVRYPSKPSVYLSKAIFSDVIKLG-VKVNTNTFNILIYGCCIENKLSEAIG 233
Query: 178 VFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
+ +M D + +Y +L+ + EA + K G L + + F L+ C
Sbjct: 234 LIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYC 293
Query: 235 RYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ + E A+ +N D+ T N+++ G C G + EA R ++ K PD V
Sbjct: 294 KLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVV 353
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY T +N L M KG KP+ VT N ++ + ++ A LR+M
Sbjct: 354 TYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKM 413
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---K 410
+ G P+ T+N+LI CK R+ + +DEM +K N +T N +L +L +
Sbjct: 414 EESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKM--NSVTLNTILHTLCGER 471
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
K ++ +L + G + +Y ++ Y + W+EM++K + P +Y
Sbjct: 472 KLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYN 531
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
MI GL G+ + ++ +E+ G+VP+ T
Sbjct: 532 TMIGGLCHSGKTDQSIDKLNELLESGLVPDETT 564
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 138/305 (45%), Gaps = 44/305 (14%)
Query: 234 CRYKHVEVAETFFESEKNEFGYDIKTMNIILNG---WCVLGNVYEAKRFWKDIIKSKCEP 290
C H A+ F ++ ++ T N ++N + +VY +K + D+IK +
Sbjct: 152 CNRPH-HAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKV 210
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
++ T+ + + KL A+ L M + PD V+ N I+D LC K ++ EA ++L
Sbjct: 211 NTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLL 270
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
+MKN G LPN T+N L+ CK+ ++ + +D M Q N LP+ T+N L+ L
Sbjct: 271 LDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNN--VLPDVWTYNMLIGGLC 328
Query: 411 K--------------------PEEVPW------------------VLERMERNGCKMSTD 432
K P+ V + ++++ME G K +
Sbjct: 329 KDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAV 388
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TYNV++K YV D + +ME+ G PD ++ +I+G GRL +A EM
Sbjct: 389 TYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEM 448
Query: 493 RLKGM 497
KG+
Sbjct: 449 SRKGL 453
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 165/364 (45%), Gaps = 21/364 (5%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E +SP FN +++ +A R E ++ DEM +N T +L+ ++
Sbjct: 415 ESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLD 474
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLL-WLCRYKHVEVAETFFESEKNEFGYDIKTMNIIL 264
+A + + G D ++ L++ + K VE + + E ++ E I T N ++
Sbjct: 475 DAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMI 534
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G C G ++ ++++S PD TY T + ++G++ A + M +K K
Sbjct: 535 GGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFK 594
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD+ TCN ++ LC + + +AL++ ++G + TYN++I LCK R E ++
Sbjct: 595 PDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDL 654
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
L EME+K P+ T+N +L +L + +E + R+ G K+ T ++
Sbjct: 655 LAEMEEKKLG--PDCYTYNAILSALADAGRMKEAEEFMSRIVEQG-KLQDQTISL----- 706
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+K + + P+ +++ I+ L +G+ +DA+ E KG+
Sbjct: 707 ------NKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHK 760
Query: 502 RTGI 505
T I
Sbjct: 761 STYI 764
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 165/359 (45%), Gaps = 11/359 (3%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P + F++++D LG+ R + ++++M D + Y L+ + E+
Sbjct: 226 TPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHK 285
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGW 267
++ G DL+ + + + E F E N G+ D ++ +I+++G
Sbjct: 286 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFR-EINAHGFIPDARSYSILIHGL 344
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
G E + + + C D+ Y ++ K GK+ A +L + M KG P V
Sbjct: 345 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 404
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT +ID L R+ EA + E K+ G NV Y+SLI K+ R++ Y ++E
Sbjct: 405 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 464
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNW 444
+ QK + PN T+N LL +L K EE+ L + M+ C + TY++++
Sbjct: 465 LMQKGLT--PNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRV 522
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+K W+EM+K G+ P+ +YT MI GL G + +A F + G +P+ +
Sbjct: 523 RKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSAS 581
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 151/342 (44%), Gaps = 47/342 (13%)
Query: 165 VLGRARRFVELIQVFDEMPDLVNEK-----TYGILLNRYAAAHMVEEAIGVFDRRKEFGE 219
VL +A R E +++F+++ N K Y ++ Y +A +EA G+ +R+K G
Sbjct: 64 VLCKANRLDEAVELFEQLEQ--NRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 121
Query: 220 LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
+ + A+ +L L + + VE A FE K + ++ T NI+++ C
Sbjct: 122 IPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLC----------- 170
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
++GKL AL + M G P+V+T N +ID LC
Sbjct: 171 ------------------------REGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCK 206
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+++ EA + M ++ C PN T++SLI L K R++ Y ++M + +P
Sbjct: 207 AQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKM--LDCGHVPGA 264
Query: 400 ITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
I + L++S K E+ + + M GC N + +K R + E
Sbjct: 265 IVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFRE 324
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ G PD RSY+++IHGL G + F+ M+ +G V
Sbjct: 325 INAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCV 366
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 159/365 (43%), Gaps = 46/365 (12%)
Query: 153 SPGSNVFNAILDVLGRA------RRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
SP + N +D + +A R I +PD ++Y IL++ A + E
Sbjct: 296 SPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPD---ARSYSILIHGLVKAGLANE 352
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
+F KE G + D A+ ++ C+ V A E K + G+ + T ++
Sbjct: 353 TYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVK-GHPPTVVTYGSVI 411
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G + + EA +++ + + + V Y++ ++ K G++ A + + + +KG
Sbjct: 412 DGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 471
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+V T NC++DAL + I EAL + MK+ C PN TY+ LI LC++++ + +
Sbjct: 472 PNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVF 531
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
EM QK G PN IT+ ++ L K + +E +G
Sbjct: 532 WQEM-QKLG-LKPNTITYTTMISGLAKAGNI------LEASG------------------ 565
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTG 504
+ + G PD SY MI GL + DA + F E RLKG +T
Sbjct: 566 --------LFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTC 617
Query: 505 ILVND 509
+++ D
Sbjct: 618 VVLLD 622
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 173/390 (44%), Gaps = 9/390 (2%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP-DLV-NEKTYGI 193
++ AY + +G P +N IL LG+ RR E +++F+EM D V N TY I
Sbjct: 106 FDEAYGLLERQKAKGSI-PSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNI 164
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
L++ + A+ + D + G ++ ++ LC+ + +E A + FE ++
Sbjct: 165 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 224
Query: 254 GY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ T + +++G G V +A ++ ++ P ++ Y + + + K G+
Sbjct: 225 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 284
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
++++ M G PD+ N +D + + + RE+ G +P+ +Y+ LI L
Sbjct: 285 KIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGL 344
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKM 429
K YE M+++ C+ + +N ++ K +V +LE M+ G
Sbjct: 345 VKAGLANETYELFYAMKEQG--CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPP 402
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ TY ++ D D+ +EE + G+ + Y+ +I G GR+++A
Sbjct: 403 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIM 462
Query: 490 HEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
E+ KG+ P T + D +K +E E
Sbjct: 463 EELMQKGLTPNVYTWNCLLDALVKAEEINE 492
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 25/174 (14%)
Query: 336 ALCFKKR-IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
A C K R + EA ++++ M+ P + Y LI K+ M
Sbjct: 18 ANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIG---KVGLM---------------- 58
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+ F ++L + +E + E++E+N YN ++ Y + D+
Sbjct: 59 -----LLFPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLL 113
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVN 508
E + KG P +Y ++ L K R+E+AL F EM+ + P IL++
Sbjct: 114 ERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILID 167
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 181/422 (42%), Gaps = 73/422 (17%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP-------DLVNEKTYGILLNRYAA 200
RE P FN+ + L + + ++ ++F +M N TY ++L +
Sbjct: 244 REEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKT 259
++E+A +F+ +E +L L ++ L L R+ AET + ++ G I +
Sbjct: 304 VGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYS 363
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM- 318
NI+++G C LG + +AK + ++ PD+VTY ++ GK+ A L Q M
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 319 ------------------W----------------EKGRKPDVVTCNCIIDALCFKKRIP 344
W EKG D VTCN I+D LC +
Sbjct: 424 RNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELD 483
Query: 345 EALEVLREMKNRG-----------------------CLPNVTTYNSLIKHLCKIKRMETV 381
+A+E+++ M+ G CLP++ TY++L+ LCK R
Sbjct: 484 KAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYN-VI 437
EM + P+ + +N + K ++ VL+ ME+ GC S +TYN +I
Sbjct: 544 KTLFAEMMGE--KLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
L L + + + +EM +KG+ P+ +Y I L + G++EDA + EM K +
Sbjct: 602 LGLGIKNQIFE-IHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNI 660
Query: 498 VP 499
P
Sbjct: 661 AP 662
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 169/369 (45%), Gaps = 16/369 (4%)
Query: 142 FFKWVSRE---GDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
F W+ ++ SP + FN ++ L + ++FDEMP+ NE T+GIL+
Sbjct: 130 FVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILV 189
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FG 254
Y A + ++ + + + + FG L + + ++ CR + +E E + E
Sbjct: 190 RGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLV 249
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK----CEPDSVTYATFVNALTKKGKLGT 310
DI T N ++ C G V +A R + D+ + P+S+TY + K G L
Sbjct: 250 PDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLED 309
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A LF+++ E + + N + L + EA VL++M ++G P++ +YN L+
Sbjct: 310 AKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMD 369
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGC 427
LCK+ + + M++ S P+ +T+ LL S+ K + +L+ M RN C
Sbjct: 370 GLCKLGMLSDAKTIVGLMKRNGVS--PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ T N++L N + +M +KG G D + +++ GL G L+ A+
Sbjct: 428 LPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 488 YFHEMRLKG 496
MR+ G
Sbjct: 488 IVKGMRVHG 496
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 137/281 (48%), Gaps = 7/281 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ T + +LNG C G EAK + +++ K +PDS+ Y F++ K+GK+ +A R+
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVL 582
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ M +KG + T N +I L K +I E ++ EM+ +G PN+ TYN+ I++LC+
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEG 642
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER--NGCKMSTDT 433
++E LDEM QKN + PN +F YL+ + K + E E + C
Sbjct: 643 GKVEDATNLLDEMMQKNIA--PNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL 700
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y+++ + K E + +G Y ++ L K LE A H+M
Sbjct: 701 YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMI 760
Query: 494 LKGMVPEPRTGILVNDMNIKL---KERGEQGKKVIKLTSLG 531
KG +P + V D K+ KE +K++++ S+G
Sbjct: 761 DKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASVG 801
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 5/250 (2%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N+++ C V A+ + ++ + C+P+ T+ V K G L L +M
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSM 208
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
G P+ V N I+ + C + R ++ +++ +M+ G +P++ T+NS I LCK ++
Sbjct: 209 ESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Query: 379 ETVYEYLDEMEQKN--GSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT 433
+ME G PN IT+N +LK K E+ + E + N +S +
Sbjct: 269 LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQS 328
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
YN+ L+ V + ++M KG+GP SY +++ GL G L DA + M+
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388
Query: 494 LKGMVPEPRT 503
G+ P+ T
Sbjct: 389 RNGVSPDAVT 398
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 132/294 (44%), Gaps = 26/294 (8%)
Query: 226 FQNLLLWLCRYKHVEVAETFFES------EKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
F L+ LC V+ A F+ + NEF T I++ G+C G +
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEF-----TFGILVRGYCKAGLTDKGLEL 204
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
+ P+ V Y T V++ ++G+ + +L + M E+G PD+VT N I ALC
Sbjct: 205 LNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCK 264
Query: 340 KKRIPEALEVLREMKNRGCL----PNVTTYNSLIKHLCKIKRME---TVYEYLDEMEQKN 392
+ ++ +A + +M+ L PN TYN ++K CK+ +E T++E + E +
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD-- 322
Query: 393 GSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
L + ++N L+ L K E VL++M G S +YN+++
Sbjct: 323 ---LVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSD 379
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ M++ G+ PD +Y ++HG G+++ A S EM +P T
Sbjct: 380 AKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 7/222 (3%)
Query: 297 TFVNALTKKGKLGTALRLFQAMWEK--GRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
+ V+ K + A FQ + + KP + N ++++ ++R+ + ++M
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMV 139
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP-- 412
G P T+N LI+ LC ++ E DEM +K C PNE TF L++ K
Sbjct: 140 LCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEK--GCKPNEFTFGILVRGYCKAGL 197
Query: 413 -EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
++ +L ME G + YN I+ + D E+M ++G+ PD ++
Sbjct: 198 TDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNS 257
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIK 513
I L +G++ DA F +M L + PR + ++ +K
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLK 299
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 12/223 (5%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
+N+++ LG + E+ + DEM P++ TY + VE+A +
Sbjct: 596 TYNSLILGLGIKNQIFEIHGLMDEMREKGISPNIC---TYNTAIQYLCEGGKVEDATNLL 652
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
D + ++ +F+ L+ C+ ++A+ FE+ + G +++ N G
Sbjct: 653 DEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAG 712
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ +A + ++ E + Y V +L KK +L A + M +KG D
Sbjct: 713 QLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALM 772
Query: 332 CIIDAL---CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ID L KK E + EM + G + N N+ H
Sbjct: 773 PVIDGLGKMGNKKEANNFAEKMMEMASVGEVANKVDPNATDIH 815
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 175/364 (48%), Gaps = 24/364 (6%)
Query: 160 NAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGVFDRRKE 216
NA+L LG+AR F ++ + +M D+ + T +GIL+N +++A+ VF++ K
Sbjct: 156 NALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMK- 214
Query: 217 FGELDDLSAF--------QNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGW 267
GE ++ F L+ LC+ E A + ++ T N ++NG+
Sbjct: 215 -GEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGY 273
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C G + A + + ++ ++ EP+ +T T V+ + K ++ TA+ F+ M +KG K +
Sbjct: 274 CRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNN 333
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT I+A C + +A+E L EM GC P+ Y +LI L + R++ + +
Sbjct: 334 VTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSK 393
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVP----WVLERMERNGCKMSTDTYNVILKLYVN 443
+++ G CL + + +N L+ K ++ W L ME G K + TYN ++ Y +
Sbjct: 394 LKEA-GFCL-DRVCYNVLISEFCKKNKLDRAQEW-LNEMELAGVKPDSVTYNTLIS-YFS 449
Query: 444 WDCEDKVRHTWEE--MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
K+ H + + E++G+ P +Y +IH +++A+ F EM P
Sbjct: 450 KIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPP 509
Query: 502 RTGI 505
T I
Sbjct: 510 NTVI 513
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 167/371 (45%), Gaps = 33/371 (8%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDL---VNEKTYGILLNRYAAAHMVE- 205
++ +NV N I+++L ++ R + V DEM P+ N+KT GI+ N +E
Sbjct: 35 HAKNTNVRNEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEG 94
Query: 206 -----EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKT 259
E G+ + + D A L+ LCR + +A ++ G D
Sbjct: 95 RVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAP 154
Query: 260 MNIILNGWCVLGNVYEAKR---FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
N +L G LG E + + + +P +T+ +N L K ++ AL +F+
Sbjct: 155 CNALLTG---LGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFE 211
Query: 317 AMWEKGRK--------PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
M KG K PD + N +ID LC R EAL ++ +M++ C P T+N L
Sbjct: 212 KM--KGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCL 269
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERN 425
I C+ +E ++ +EME N PN IT N L+ + K + +E M++
Sbjct: 270 INGYCRSGEIEVAHKLFNEME--NAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQK 327
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G K + TY V + + N + +K +EM K G PD Y +I GL GRL+DA
Sbjct: 328 GLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDA 387
Query: 486 LSYFHEMRLKG 496
S +++ G
Sbjct: 388 SSVVSKLKEAG 398
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 180/404 (44%), Gaps = 16/404 (3%)
Query: 111 KALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGD----YSPGSNVFNAILDVL 166
K +N +T +++N + ++R +A F K + + +P + ++N ++D L
Sbjct: 179 KDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGL 238
Query: 167 GRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
+ R E + + +M T+ L+N Y + +E A +F+ + ++
Sbjct: 239 CKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNV 298
Query: 224 SAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
L+ +C++ + A FF +K G ++ T + +N +C + N+ +A F
Sbjct: 299 ITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNV-TYTVFINAFCNVNNMNKAMEFLD 357
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK 341
++ K C PD+V Y T + L + G+L A + + E G D V N +I C K
Sbjct: 358 EMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKN 417
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
++ A E L EM+ G P+ TYN+LI + KI + ++++ +M ++ G P T
Sbjct: 418 KLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLS-PTVFT 476
Query: 402 FNYLLKSL---KKPEEVPWVLERMERNGCKMSTDT--YNVILKLYVNWDCEDKVRHTWEE 456
+ L+ + +E + + M K+ +T YN+++ + ++
Sbjct: 477 YGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDD 536
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
M+ +G+ P+ +Y + L DK L+ A M + P+
Sbjct: 537 MKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPD 580
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 136/289 (47%), Gaps = 18/289 (6%)
Query: 138 AAYTFFKWVSREGDYSPGSNV-FNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
A FF+ + ++G G+NV + ++ + ++ DEM PD V
Sbjct: 316 TAVEFFRVMQQKG--LKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAV---V 370
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESE 249
Y L+ A A +++A V + KE G D + L+ C+ ++ A+ + E E
Sbjct: 371 YYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEME 430
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKL 308
D T N +++ + +GN A +F K + + + P TY ++A +
Sbjct: 431 LAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNI 490
Query: 309 GTALRLFQAMWEKGRK--PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
A+++F+ M K P+ V N +ID+LC + ++ AL +L +MK RG +PN TTYN
Sbjct: 491 DEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYN 550
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
S+ K L ++ ++ +D M ++ +C P+ IT L + L E+
Sbjct: 551 SIFKALRDKNWLDKAFKLMDRMVEQ--ACNPDYITMEILTEWLSAVGEI 597
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 137/323 (42%), Gaps = 24/323 (7%)
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDL-SAFQNLLLWLCRYKH-VEVAETFFESEKN 251
LL R MV+EA+ F + ++ + NLLL R + + V + E +
Sbjct: 12 LLRRLGRIGMVDEALAAFSTLDSHAKNTNVRNEIINLLLKSGRVDNAMNVLDEMLLPE-S 70
Query: 252 EFGYDIKTMNIILNGWCVL----GNVYE------AKRFWKDIIKSKCEPDSVTYATFVNA 301
EF + KT I+ N + G V E +F K I PD++ ++
Sbjct: 71 EFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIF----PDTIALTQLISK 126
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L + G A + + D CN ++ L + + ++R+MK+ P
Sbjct: 127 LCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPT 186
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEM----EQKNGSCLPNEITFNYLLKSLKK---PEE 414
V T+ LI HLCK +R++ E ++M E+ P+ I +N L+ L K EE
Sbjct: 187 VITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEE 246
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
++ +M + C +T T+N ++ Y + + EME + P+ + ++
Sbjct: 247 ALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVD 306
Query: 475 GLYDKGRLEDALSYFHEMRLKGM 497
G+ R+ A+ +F M+ KG+
Sbjct: 307 GMCKHNRISTAVEFFRVMQQKGL 329
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 19/223 (8%)
Query: 298 FVNALTKKGKLGTALRLFQAMW--EKGRKPDVVTCNCI------IDALCFKKRIPEALEV 349
+N L K G++ A+ + M E +P+ T + ID L + + E +
Sbjct: 45 IINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGL 104
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+ + P+ LI LC+ + LD + NG L + N LL L
Sbjct: 105 VSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNG--LKDAAPCNALLTGL 162
Query: 410 KKPEE---VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME------KK 460
K E + ++ +M+ + + T+ +++ + D +E+M+ K
Sbjct: 163 GKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKV 222
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ PD Y +I GL GR E+AL +MR P T
Sbjct: 223 FVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTAT 265
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 164/368 (44%), Gaps = 50/368 (13%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A ++F+ + + G P + ++ L +A ++ + Q+F+EM P+LV TY
Sbjct: 68 AASYFEQMVQSGCL-PDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV---TYA 123
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
++N Y A +++A+ + R K G S + L+ LC++ E A FE +
Sbjct: 124 TVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAGD 183
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D + Y +F++ L K GKL A
Sbjct: 184 V------------------------------------QDVIVYTSFISGLCKAGKLDEAK 207
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ M E G PD V+ N II +LC R+ EA E++ + R C+P V L+ L
Sbjct: 208 AVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGL 267
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKM 429
CK +R+E L+ M + G P+ +T++ ++ L K + + VL++M R GC
Sbjct: 268 CKSRRVEEACVILERMLEA-GDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVP 326
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TY I+ + D+ R ++ M ++G D +Y ++I G ++++A++
Sbjct: 327 DVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMI 386
Query: 490 HEMRLKGM 497
EM +G+
Sbjct: 387 EEMAGRGI 394
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 139/336 (41%), Gaps = 36/336 (10%)
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
K G + F +L+ LC A + F + + D +++ C + +
Sbjct: 6 KAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKL 65
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
A +++ +++S C PD VTY V++L K K ++F+ M KG P++VT +
Sbjct: 66 DLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATV 125
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY--------- 384
++ C RI +AL ++R +K G P+ + Y++LI LCK R E E
Sbjct: 126 VNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAGDVQ 185
Query: 385 -----------------LDEMEQKN-----GSCLPNEITFNYLLKSLKKPEEVPWVLERM 422
LDE + + C P+ +++N ++ SL K V E M
Sbjct: 186 DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELM 245
Query: 423 ER---NGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
++ C V++ L + E+ +E P +Y+ +I GL
Sbjct: 246 DQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCK 305
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKL 514
RL+DA +MR G VP+ T + D K+
Sbjct: 306 ADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKV 341
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 5/179 (2%)
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
L M G P +VT +I LC +AL++ +M + P+ Y +I HLC
Sbjct: 1 LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMS 430
KI +++ Y ++M Q CLP+++T+ L+ SL K E+ + E M G
Sbjct: 61 KINKLDLAASYFEQMVQSG--CLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 118
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TY ++ Y D+ ++ G P Y+ +I GL R E+A F
Sbjct: 119 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF 177
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 42/156 (26%)
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKI----KRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+L EMK G P + T+ SLI+ LC++ K ++ ++ +D M+ K P+ +
Sbjct: 1 LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMID-MKVK-----PDAFLYTV 54
Query: 405 LLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
++ L CK++ L L ++ +E+M + G P
Sbjct: 55 VIGHL-----------------CKINK------LDLAASY---------FEQMVQSGCLP 82
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D+ +YTV++H L+ + E F EM KG PE
Sbjct: 83 DKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 118
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 187/435 (42%), Gaps = 79/435 (18%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR-----ARRFVELIQ-VFDEMPDLVNE 188
D+ AY FK + + G PG V+N + + + ++L++ + EM DL
Sbjct: 364 DYSYAYKLFKKMIKCG-CQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDL--- 419
Query: 189 KTYGILLNRYAAAHMVEEAIGV--FDRRKEF-------GELDDLSAFQNLLLWLCRYKHV 239
G++LN+ ++ G FD+ + G + D S + ++ +LC V
Sbjct: 420 ---GVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKV 476
Query: 240 EVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
E A + FE ++N + T I+++ +C G + +A++++ +++ C P+ VTY
Sbjct: 477 EKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTAL 536
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVT-----------------C----------- 330
++A K ++ A LF+ M +G KP+VVT C
Sbjct: 537 IHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIE 596
Query: 331 -------------NC----------IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
NC ++D LC R+ EA E+L M GC PN Y++
Sbjct: 597 SSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDA 656
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMER 424
+I CKI +++ E +M ++ S PN T++ + L K + VL+ +M
Sbjct: 657 VIDGFCKIGKLQDAQEVFTKMSERGYS--PNLYTYSSFIDCLFKDNRLDLVLKVLSKMLE 714
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
N C + Y ++ D+ +ME+KG P+ +YT MI G G++E
Sbjct: 715 NSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQ 774
Query: 485 ALSYFHEMRLKGMVP 499
L F +M KG P
Sbjct: 775 CLELFRDMCSKGCAP 789
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 167/365 (45%), Gaps = 25/365 (6%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAI 208
+ P + ++ ++ L A + + +F+EM + + TY IL++ + A ++++A
Sbjct: 456 FVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQAR 515
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGW 267
FD G ++ + L+ + K + VA+ FE E ++ T +++G
Sbjct: 516 KWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGH 575
Query: 268 CVLGNVYEA----KRFWKDIIKS-----------KCE-PDSVTYATFVNALTKKGKLGTA 311
C G + +A R DI S CE P+ +TY V+ L K ++ A
Sbjct: 576 CKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEA 635
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L M G +P+ + + +ID C ++ +A EV +M RG PN+ TY+S I
Sbjct: 636 HELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDC 695
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
L K R++ V + L +M + SC PN + + ++ L K +E ++ +ME GC
Sbjct: 696 LFKDNRLDLVLKVLSKMLEN--SCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCN 753
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+ TY ++ + ++ + +M KG P+ +Y V+I+ G L++A
Sbjct: 754 PNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKL 813
Query: 489 FHEMR 493
EM+
Sbjct: 814 LDEMK 818
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 155/349 (44%), Gaps = 32/349 (9%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A++ F+ + R G P + ++D +A + + FDEM P++V T
Sbjct: 477 EKAFSLFEEMKRNG-IVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVV---T 532
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-------- 242
Y L++ Y A + A +F+ G ++ + L+ C+ +E A
Sbjct: 533 YTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMR 592
Query: 243 --------ETFFESEKNEF-GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ +F+ + N G ++ T +++G C V EA ++ CEP+ +
Sbjct: 593 GDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQI 652
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
Y ++ K GKL A +F M E+G P++ T + ID L R+ L+VL +M
Sbjct: 653 VYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKM 712
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
C PNV Y ++ LCKI + + Y+ + +ME+K C PN +T+ ++ K
Sbjct: 713 LENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEK--GCNPNVVTYTAMIDGFGKSG 770
Query: 414 EVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
++ LE M GC + TY V++ + D+ +EM++
Sbjct: 771 KIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQ 819
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 182/442 (41%), Gaps = 31/442 (7%)
Query: 87 GDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWV 146
GD+ + LKT E + Q L D L+V V+N + + E FF W
Sbjct: 74 GDDAISTISKALKT---GFNIETHQFFRQFRNQLNDSLVVEVMNNVK-NPELCVKFFLWA 129
Query: 147 SREGDYSPGSNVFNAILDVLG---RARRFVE---LIQVFDEMPDLVNEKTYGILLNRYAA 200
R+ YS VF+ +LD+LG A V L+++ D+ +L+ + L+ +
Sbjct: 130 GRQIGYSHTPQVFDKLLDLLGCNVNADDRVPLKFLMEIKDDDHELL-RRLLNFLVRKCCR 188
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF-FESEKNEFGYDIKT 259
A+ R K+FG + + L+ R ++ A E F D T
Sbjct: 189 NGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYT 248
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCE--PDSVTYATFVNALTKKGKLGTALRLFQA 317
++ C G EA D+I + PD+V Y V+ L + A+ +
Sbjct: 249 LSCFAYSLCKGGKCREA----FDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHR 304
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M P+VVT ++ K ++ +L M GC PN +NSLI CK +
Sbjct: 305 MRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRD 364
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW--VLERMERNGCKMSTDTYN 435
Y+ +M + C P + +N + S+ EE P +L+ +E+ +M D
Sbjct: 365 YSYAYKLFKKMIK--CGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEM-LDLGV 421
Query: 436 VILKLYVNWDCE--------DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
V+ K+ V+ D+ EM KG PD +Y+ +I L D ++E A S
Sbjct: 422 VLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFS 481
Query: 488 YFHEMRLKGMVPEPRTGILVND 509
F EM+ G+VP T ++ D
Sbjct: 482 LFEEMKRNGIVPSVYTYTILID 503
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 168/416 (40%), Gaps = 30/416 (7%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE-- 206
EG Y P +FN+++ ++R + ++F +M + Y ++ N + + E
Sbjct: 343 EGCY-PNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGY-LVYNIFIGSVCSNEEQ 400
Query: 207 -AIGVFDR-RKEFGELDDLSAF------QNLLLWLCRYKHVEVA-ETFFESEKNEFGYDI 257
+ + D K + E+ DL N LC + A + E F D
Sbjct: 401 PSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDD 460
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T + ++ C V +A ++++ ++ P TY +++ K G + A + F
Sbjct: 461 STYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDE 520
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M KG P+VVT +I A K++P A E+ M GC PNV TY +LI CK +
Sbjct: 521 MLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQ 580
Query: 378 METVYEYLDEME--------------QKNGSCLPNEITFNYLLKSLKKP---EEVPWVLE 420
+E + M N PN IT+ L+ L K +E +L+
Sbjct: 581 IEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLD 640
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
M +GC+ + Y+ ++ + + + +M ++G P+ +Y+ I L+
Sbjct: 641 TMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDN 700
Query: 481 RLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
RL+ L +M P + D K+ + E K ++K+ G N
Sbjct: 701 RLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNV 756
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 145/356 (40%), Gaps = 59/356 (16%)
Query: 107 GEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNV--FNAILD 164
G+IEKA + R R D E++ K+ + + G NV + A++D
Sbjct: 579 GQIEKA-------------CQIYARMRGDIESS-DMDKYFKLDHNNCEGPNVITYGALVD 624
Query: 165 VLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
L +A R E ++ D M P N+ Y +++ + +++A VF + E G
Sbjct: 625 GLCKANRVKEAHELLDTMLAHGCEP---NQIVYDAVIDGFCKIGKLQDAQEVFTKMSERG 681
Query: 219 ELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
+L + + + L + ++ V + + +N ++ +++G C +G EA
Sbjct: 682 YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAY 741
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+ + + C P+ VTY ++ K GK+ L LF+ M KG P+ +T +I+
Sbjct: 742 KLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHC 801
Query: 338 CFKKRIPEALEVLREMKNR------------------------GCL---------PNVTT 364
C + EA ++L EMK G L P +
Sbjct: 802 CSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPVDSL 861
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE 420
Y LI + K R+E + L+E+ + N+ + L+++L +V LE
Sbjct: 862 YRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALE 917
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 161/354 (45%), Gaps = 9/354 (2%)
Query: 153 SPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIG 209
SP +N +++ L G + ELIQ + V+ TY L+ Y +EEA
Sbjct: 234 SPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASR 293
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWC 268
+ + G + + + ++ LC++ V A + N+ D+ + N ++ G+
Sbjct: 294 LGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYT 353
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
LGN+ EA + ++ P VTY T ++ L + G L A+RL M + G PDV
Sbjct: 354 RLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVF 413
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T + C +P A E+ EM NRG P+ Y + I K+ + +EM
Sbjct: 414 TFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEM 473
Query: 389 EQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ P+ IT+N + L K +E ++++M NG TY I+ ++
Sbjct: 474 LARGFP--PDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAG 531
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
K R + EM KG+ P +YTV+IH +GRL+ A+ +F EM KG+ P
Sbjct: 532 HLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHP 585
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 174/401 (43%), Gaps = 27/401 (6%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR---------ARRFVE 174
L+V V+N R A FF+W R+ + ++ ILD+L R V
Sbjct: 49 LLVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVV 108
Query: 175 LIQVFDEMPDLVNEKTYG---------ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+++ + + D+V+ +LL Y ++E+ + VF + G L D+
Sbjct: 109 SVKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKN 168
Query: 226 FQNLLLWL-CRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKD 282
+L L R +++VA + E G + T N +L+ +C G V EA +
Sbjct: 169 CNRVLRLLRDRDNNIDVAREVYNVMV-ECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQ 227
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ C P+ VTY VN L+ G++ A L Q M G + V T + +I C K +
Sbjct: 228 MQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQ 287
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
I EA + EM +RG +P V TYN+++ LCK R+ + LD M KN +P+ +++
Sbjct: 288 IEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKN--LMPDLVSY 345
Query: 403 NYLL---KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
N L+ L E + + S TYN ++ D +EM K
Sbjct: 346 NTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIK 405
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
G PD ++T + G G L A F EM +G+ P+
Sbjct: 406 HGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPD 446
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 152/339 (44%), Gaps = 9/339 (2%)
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
AR+ ++++ + MPDLV +Y L+ Y + EA +F + + +
Sbjct: 326 ARKLLDVMVNKNLMPDLV---SYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNT 382
Query: 229 LLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
L+ LCR ++VA E K+ D+ T + G+C +GN+ AK + +++
Sbjct: 383 LIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRG 442
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
+PD Y T + K G A + + M +G PD++T N ID L + EA
Sbjct: 443 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 502
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
E++++M G +P+ TY S+I + EM K P+ +T+ L+
Sbjct: 503 ELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSK--GIFPSVVTYTVLIH 560
Query: 408 SLKKPEEVPWVLER---MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
S + + M G + TYN ++ D+ + + EM+ KG+ P
Sbjct: 561 SYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISP 620
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ +YT++I+ + G ++AL + +M + + P+ T
Sbjct: 621 NKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCT 659
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 141 TFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI---LLNR 197
TF + + G+ +F+ +L+ + RF + ++ E+ K +G+ +L R
Sbjct: 417 TFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 476
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDI 257
++ + + D + G L + S +L+ N D
Sbjct: 477 GFPPDLITYNVFI-DGLHKLGNLKEASELVKKMLY------------------NGLVPDH 517
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T I++ + G++ +A+ + +++ P VTY +++ +G+L A+ F
Sbjct: 518 VTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFE 577
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M EKG P+V+T N +I+ LC +++ +A EM+ +G PN TY LI C +
Sbjct: 578 MHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGH 637
Query: 378 -METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
E + Y D ++++ P+ T LLK L K
Sbjct: 638 WQEALRLYKDMLDRE---IQPDSCTHRSLLKHLNK 669
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 170/359 (47%), Gaps = 17/359 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P S F +++D LGR + + ++++M D N Y L+ + E+
Sbjct: 478 TPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHK 537
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWC 268
++ G DL N + + + +E FE K + D+++ +I+++G
Sbjct: 538 IYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLV 597
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G + + + ++ + D+ Y ++ K GK+ A +L + M KG +P VV
Sbjct: 598 KGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVV 657
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +ID L R+ EA + E K++ NV Y+SLI K+ R++ Y L+E+
Sbjct: 658 TYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEEL 717
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWD 445
QK + PN T+N LL +L K EE+ L + M+ C + TY+++ VN
Sbjct: 718 MQKGLT--PNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIM----VNGL 771
Query: 446 CE----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
C+ +K W+EM+K+G+ P+ +YT MI GL G + +A F + G +P+
Sbjct: 772 CKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPD 830
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 181/407 (44%), Gaps = 51/407 (12%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
+E Y ++F ++ V R R + + DEM DLV Y + ++ +
Sbjct: 229 QEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLV---LYNVCIDCFGKV 285
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTM 260
V+ A F K G + D F +++ LC+ + V E E F E + N+ +
Sbjct: 286 GKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAY 345
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N ++ G+ +G EA + + C P + Y + L +KGK+ ALR+ +AM +
Sbjct: 346 NTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-K 404
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
P++ + N +ID LC + AL+V MK G PN+ T N +I LCK +R++
Sbjct: 405 MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDE 464
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNG----------- 426
++ K C P+ +TF L+ L + +V + E+M +G
Sbjct: 465 ACSIFLGLDHK--VCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSL 522
Query: 427 ------CKMSTDTYNVI-----------LKLYVNW-DCE------DKVRHTWEEMEKKGM 462
C D + + L L N+ DC +K R +EE++ +G+
Sbjct: 523 IRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGL 582
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
PD RSY+++IHGL G +D F+EM+ +G+ + R +V D
Sbjct: 583 TPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVID 629
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 177/387 (45%), Gaps = 28/387 (7%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
AY ++ + G +P + V+ +++ + R + +++ EM PDL
Sbjct: 500 AYMLYEKMLDSGQ-TPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDL------- 551
Query: 193 ILLNRYA----AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFE 247
+LLN Y A +E+ +F+ K G D+ ++ L+ L + + + F+E
Sbjct: 552 MLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYE 611
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
++ D + NI+++G+C G V +A + +++ +P VTY + ++ L K +
Sbjct: 612 MKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDR 671
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
L A LF+ K +VV + +ID RI EA +L E+ +G PN T+N
Sbjct: 672 LDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNC 731
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE-----VPWVLERM 422
L+ L K + ++ M KN C PNE+T++ ++ L K + V W + M
Sbjct: 732 LLDALVKAEEIDEALVCFQNM--KNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFW--QEM 787
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
++ G K +T TY ++ + + +E + G PD Y MI GL + +
Sbjct: 788 QKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKA 847
Query: 483 EDALSYFHEMRLKGMVPEPRTGILVND 509
DA F E RLKG +T +++ D
Sbjct: 848 MDAYILFEETRLKGCRIYSKTCVVLLD 874
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 168/369 (45%), Gaps = 9/369 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGI 193
+ A+ FF + +G P F +++ VL +A R E +++F+E+ + Y
Sbjct: 289 DMAWKFFHELKSQG-LVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNT 347
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
++ Y + EA + +R+K G + + A+ +L L R VE A E+ K +
Sbjct: 348 MIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA 407
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
++ + NI+++ C G + A + + ++ P+ +T ++ L K +L A
Sbjct: 408 APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACS 467
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+F + K PD VT +ID L ++ +A + +M + G PN Y SLI++
Sbjct: 468 IFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFF 527
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMS 430
K R E ++ EM + C P+ + N + + K E+ + E ++ G
Sbjct: 528 KCGRKEDGHKIYKEMMHRG--CSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPD 585
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
+Y++++ V + EM+++G+ D R+Y ++I G G++ A
Sbjct: 586 VRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLE 645
Query: 491 EMRLKGMVP 499
EM+ KG+ P
Sbjct: 646 EMKTKGLQP 654
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 186/456 (40%), Gaps = 48/456 (10%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E ALN + +L+V VI R + D A +F+WV R+ +NA+L ++ R
Sbjct: 86 LEDALNTFDEMPQPELVVGVIRRLK-DVRVALHYFRWVERKTKQLHSPEAYNALLMLMAR 144
Query: 169 ARRFVELIQVFDEMP------------DLVNE--------------------------KT 190
R L Q+ +EM ++V
Sbjct: 145 TRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSA 204
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESE 249
Y L+ +AAH + + + + +E G + F L+ R V+ A + E +
Sbjct: 205 YTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMK 264
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
N F D+ N+ ++ + +G V A +F+ ++ PD VT+ + + L K ++
Sbjct: 265 SNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVD 324
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+ LF+ + P V N +I + EA +L K +GC+P+V YN ++
Sbjct: 325 EAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCIL 384
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNG 426
L + ++E L+ M+ PN ++N L+ L K E+ L + M+ G
Sbjct: 385 TCLGRKGKVEEALRILEAMKMDAA---PNLTSYNILIDMLCKAGELEAALKVQDSMKEAG 441
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ T N+++ D+ + ++ K PD ++ +I GL G++ DA
Sbjct: 442 LFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAY 501
Query: 487 SYFHEMRLKGMVPEP--RTGILVNDMNIKLKERGEQ 520
+ +M G P T ++ N KE G +
Sbjct: 502 MLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHK 537
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 175/395 (44%), Gaps = 44/395 (11%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEA 207
D +P +N ++D+L +A ++V D M + N T I+++R A ++EA
Sbjct: 406 DAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEA 465
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-----------------------ET 244
+F D F +L+ L R+ V A
Sbjct: 466 CSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRN 525
Query: 245 FFESEKNEFGYDI-KTMN--------IILNGW--CVL--GNVYEAKRFWKDIIKSKCEPD 291
FF+ + E G+ I K M ++LN + CV G + + + +++I PD
Sbjct: 526 FFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPD 585
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+Y+ ++ L K G +LF M E+G D N +ID C ++ +A ++L
Sbjct: 586 VRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLE 645
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
EMK +G P V TY S+I L KI R++ Y +E + K + N + ++ L+ K
Sbjct: 646 EMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK--AVDLNVVVYSSLIDGFGK 703
Query: 412 P---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
+E +LE + + G +T T+N +L V + D+ ++ M+ P++ +
Sbjct: 704 VGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVT 763
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
Y++M++GL + A ++ EM+ +G+ P T
Sbjct: 764 YSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTIT 798
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 174/387 (44%), Gaps = 9/387 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD--EMPDLVNEKTYGILLN 196
AY+ + R+G P +N IL LGR + E +++ + +M N +Y IL++
Sbjct: 361 AYSLLERQKRKG-CIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILID 419
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGY 255
A +E A+ V D KE G ++ ++ LC+ + + E F +
Sbjct: 420 MLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTP 479
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D T +++G G V +A ++ ++ S P++V Y + + K G+ +++
Sbjct: 480 DSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIY 539
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ M +G PD++ N +D + I + + E+K +G P+V +Y+ LI L K
Sbjct: 540 KEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKG 599
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTD 432
+ Y+ EM+++ G L +N ++ K +V +LE M+ G + +
Sbjct: 600 GFSKDTYKLFYEMKEQ-GLHLDTR-AYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVV 657
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY ++ D D+ +EE + K + + Y+ +I G GR+++A E+
Sbjct: 658 TYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEEL 717
Query: 493 RLKGMVPEPRTGILVNDMNIKLKERGE 519
KG+ P T + D +K +E E
Sbjct: 718 MQKGLTPNTYTWNCLLDALVKAEEIDE 744
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 184/386 (47%), Gaps = 19/386 (4%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVL-GRARRFVELIQVFDEM------PDLVNEKT 190
+A FF + +G +P +N ++ L GR R E + + +M P++V T
Sbjct: 173 SARRFFDSMLSDG-VAPNVYTYNILVRALCGRGHR-KEALSILRDMRGAGCGPNVV---T 227
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y L+ + A V+ A + +E G +L F +++ +C+ +E A F+
Sbjct: 228 YNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMV 287
Query: 251 NE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
E D + N ++ G+C G +EA + ++ + PD VT+ + ++ + K G L
Sbjct: 288 REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLE 347
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+ L + M E+G + + VT +ID C K + +AL +R MK P+V YN+LI
Sbjct: 348 RAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALI 407
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNG 426
C + RM+ E L EME K P+ +T++ ++ + K + E +M G
Sbjct: 408 NGYCMVGRMDEARELLHEMEAKGLK--PDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 465
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
TY+ ++++ ++ M K G+ PD+ +YT +I G +G +E AL
Sbjct: 466 VLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESAL 525
Query: 487 SYFHEMRLKGMVPEPRT-GILVNDMN 511
S +M G++P+ T +L+N ++
Sbjct: 526 SLHDKMVKAGVLPDVVTYSVLINGLS 551
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 6/211 (2%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P + Y + AL+ L +A R F +M G P+V T N ++ ALC + EAL +
Sbjct: 154 PSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
LR+M+ GC PNV TYN+L+ + ++ + M + G PN +TFN ++ +
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMRE--GGLKPNLVTFNSMVNGM 270
Query: 410 KKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K E+ V + M R G +YN ++ Y C + + EM +KG+ PD
Sbjct: 271 CKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 330
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
++T +IH + G LE A++ +MR +G+
Sbjct: 331 VTFTSLIHVMCKAGNLERAVTLVRQMRERGL 361
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 173/435 (39%), Gaps = 99/435 (22%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
REG P FN++++ + +A + + +VFDEM PD V +Y L+ Y A
Sbjct: 252 REGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGV---SYNTLVGGYCKA 308
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKNEFGY 255
EA+ VF + G + D+ F +L+ +C+ ++E A T + NE +
Sbjct: 309 GCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTF 368
Query: 256 ------------------------------DIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
+ N ++NG+C++G + EA+ ++
Sbjct: 369 TALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEA 428
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+PD VTY+T ++A K +A L Q M EKG PD +T + +I LC +KR+ +
Sbjct: 429 KGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSD 488
Query: 346 A-----------------------------------LEVLREMKNRGCLPNVTTYNSLIK 370
A L + +M G LP+V TY+ LI
Sbjct: 489 AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLIN 548
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMS 430
L K R + L ++ ++ +P ++ L+ +K E+ VL
Sbjct: 549 GLSKSARAMEAQQLLFKLYHEDP--IPANTKYDALMHCCRK-AELKSVL----------- 594
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
+LK + ++ ++ M + D Y+V+IHG G + ALS+
Sbjct: 595 -----ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHK 649
Query: 491 EMRLKGMVPEPRTGI 505
+M G P + I
Sbjct: 650 QMLQGGFAPNSTSTI 664
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 105/281 (37%), Gaps = 70/281 (24%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +NA+++ R E ++ EM PD+V TY +++ Y A
Sbjct: 398 PSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVV---TYSTIISAYCKNCDTHSA 454
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKNEFGYDIKTMN 261
+ + E G L D + +L+ LC K + A F++ + +EF Y
Sbjct: 455 FELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTY-----T 509
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK----------------- 304
+++G C GNV A ++K+ PD VTY+ +N L+K
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 569
Query: 305 ---------------------------------KGKLGTALRLFQAMWEKGRKPDVVTCN 331
KG + A +++Q+M ++ D +
Sbjct: 570 DPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYS 629
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+I C + +AL ++M G PN T+ SLI+ L
Sbjct: 630 VLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGL 670
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 100/246 (40%), Gaps = 28/246 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A+ FK + + G P + +++D + + + D+M PD+V TY
Sbjct: 489 AHVLFKNMIKLG-LQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVV---TYS 544
Query: 193 ILLNRYAAAHMVEEAIGV---------------FDRRKEFGELDDLSAFQNLLLWLCRYK 237
+L+N + + EA + +D +L + LL C
Sbjct: 545 VLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKG 604
Query: 238 HVEVAETFFES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
+ A+ ++S ++N + D +++++G C GNV +A F K +++ P+S +
Sbjct: 605 LMNEADKVYQSMLDRN-WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTST 663
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+ + L + G + A ++ Q + D +ID + + L+VL M
Sbjct: 664 ISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAK 723
Query: 356 RGCLPN 361
G LP+
Sbjct: 724 DGLLPS 729
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 151/321 (47%), Gaps = 9/321 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY IL++ AH E A+ F + G ++ +LL C K + A
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHR 172
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNALTKK 305
E G D+ + +I+L C G +A + + + + C PD V Y+T ++ K+
Sbjct: 173 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKE 232
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G + A LF+ M ++G PD VT + ++ ALC + + +A LR+M N+G LPN TY
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTY 292
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
N+LI + + EM + S LP+ +T + L+ SL K +E V + M
Sbjct: 293 NNLIYGYSSTGQWKEAVRVFKEMRRH--SILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 350
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G + +Y ++L Y C + ++ M G+ PD ++ V+I + G L
Sbjct: 351 AMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGML 410
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
+ A+ F+EMR G+ P+ T
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVT 431
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 164/376 (43%), Gaps = 21/376 (5%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
R+ P + ++ L R + + ++ F++M D G+ ++YA +++
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID------QGVAPDKYAYHCLIQGF 474
Query: 208 I--GVFDRRKEF-------GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIK 258
G + KE G D+ F +++ LC+ V A+ F+ N +
Sbjct: 475 CTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTA 534
Query: 259 TM-NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
+ +++++G+C++G + +A R + ++ + EP+ V Y T VN K G++ L LF+
Sbjct: 535 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFRE 594
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M +KG KP + N IID L R A EM G N TYN +++ L K +
Sbjct: 595 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRC 654
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTY 434
+ E+ N N IT N ++ + ++ EE + + R+G TY
Sbjct: 655 FDEAIFLFKELRAMNVKI--NIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTY 712
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++++ + ++ + M+ G PD R ++ L K + A +Y ++
Sbjct: 713 SIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDE 772
Query: 495 KGMVPEPRTGILVNDM 510
+ E T +L+ D+
Sbjct: 773 RNFSLEHLTTMLLVDL 788
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 174/429 (40%), Gaps = 53/429 (12%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP ++ ++D + + +F EM PD V TY +++ A +++
Sbjct: 216 SPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFV---TYSSVVHALCKARAMDK 272
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILN 265
A + G L + + NL+ E F E ++ D+ T+++++
Sbjct: 273 AEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMG 332
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G + EA+ + + P+ +Y +N KG L LF M G P
Sbjct: 333 SLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T N +I A + +A+ + EM++ G P+V TY ++I LC+I +M+ E
Sbjct: 393 DIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452
Query: 386 DEMEQKNGSCLPNEITFNYLLKS-------LKKPEEVPWVL-----------ERMERNGC 427
++M + + P++ ++ L++ LK E + ++ + N C
Sbjct: 453 NQMIDQGVA--PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 510
Query: 428 KM--------------------STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
K+ + Y++++ Y +K ++ M G+ P+
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDV 570
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKL 527
Y +++G GR+++ LS F EM KG+ P + IL N + L E G +K
Sbjct: 571 VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP---STILYNIIIDGLFEAGRTVPAKVKF 627
Query: 528 TSLGLKGNA 536
+ G A
Sbjct: 628 HEMTESGIA 636
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 107 GEIEKALNQCELTLT------DDLIVNVINRY----RFDWEAAYTFFKWVSREGDYSPGS 156
G++EKAL + ++ D + ++N Y R D + F+ + ++G P +
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRID--EGLSLFREMLQKG-IKPST 604
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
++N I+D L A R V F EM + +N+ TY I+L +EAI +F
Sbjct: 605 ILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKE 664
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGN 272
+ ++ ++ + + + VE A+ F S ++ + T +I++ G
Sbjct: 665 LRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGL 724
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
V EA+ + + + CEPDS V L KK ++
Sbjct: 725 VEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 760
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 207/468 (44%), Gaps = 45/468 (9%)
Query: 59 LFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCEL 118
L LG I Q +HSLA+ + S+++ + +++ ++LK S G EKAL E
Sbjct: 122 LILGSI-IEQPLHSLASFFDSSKYEL-----LQVDLISLLKALDYS--GNWEKALLLFEW 173
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAI------LDV------- 165
++ + I N + D A + + RE ++ S +F+ I LDV
Sbjct: 174 SVLNLGIAN----EKIDRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTIL 229
Query: 166 --LGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYA-AAHMVEEAIGVFDRRKE 216
R ++ I++F+ M P LV TY ++L+ Y ++ + + D +
Sbjct: 230 HAYSRTGKYHRAIEIFERMNESGLSPSLV---TYNVMLDVYGKMGRSWDKILELLDEMRS 286
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNVY 274
G D +L R ++ A FF K+E GY T+ N +L+ + G
Sbjct: 287 RGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSE-GYKPGTVTYNALLHVFGKAGIFS 345
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA ++ ++ C PD+VTY V A + G + AM KG P+ VT II
Sbjct: 346 EALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTII 405
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+A I +ALE+ +M GC+PNV TYN+++ L K E + + L M K
Sbjct: 406 NAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHM--KLNG 463
Query: 395 CLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
C PN IT+N +L K + V V M+ G + DT+N ++ Y +
Sbjct: 464 CSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAA 523
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
EEM K G P +Y +++ L +G + A S +MR KG P
Sbjct: 524 KMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRP 571
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 152/382 (39%), Gaps = 46/382 (12%)
Query: 132 YRFDWEAAYTFFKWVSRE---GDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DL 185
Y +WE A F+W + + ++ +LGR + ++FD +P +
Sbjct: 160 YSGNWEKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTVASKLFDVIPLDDYV 219
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
++ + Y +L+ Y+ AI +F+R E G
Sbjct: 220 LDVRAYTTILHAYSRTGKYHRAIEIFERMNESG--------------------------- 252
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTK 304
+ T N++L+ + +G ++ D ++S+ + D T +T ++A +
Sbjct: 253 -------LSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGR 305
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
+G + A F + +G KP VT N ++ EAL VL EM+ C P+ T
Sbjct: 306 EGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVT 365
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---R 421
YN ++ + E +D M K +PN +T+ ++ + + ++ LE +
Sbjct: 366 YNEVVAAYVRAGFHEEGAVVIDAMASK--GIMPNAVTYTTIINAYGRVGDIDKALEMFDQ 423
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M GC + TYN +L + +++ M+ G P+ ++ M+ KG
Sbjct: 424 MMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGM 483
Query: 482 LEDALSYFHEMRLKGMVPEPRT 503
+ F EM+ G P+ T
Sbjct: 484 HKYVNQVFREMKNCGFEPDRDT 505
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 174/447 (38%), Gaps = 94/447 (21%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV---- 186
+ A FF + EG Y PG+ +NA+L V G+A F E + V EM PD V
Sbjct: 310 DEAREFFSGLKSEG-YKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNE 368
Query: 187 ----------------------------NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
N TY ++N Y +++A+ +FD+ E G
Sbjct: 369 VVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELG 428
Query: 219 ELDDLSAFQNLLLWLCRYK-HVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
+ +++ + +L L + E+ + + N + T N +L G
Sbjct: 429 CVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVN 488
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+ ++++ EPD T+ T ++A + G A ++ + M + G P + T N +++AL
Sbjct: 489 QVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNAL 548
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK---IKRMETVYEYLDEMEQKNGS 394
+ A V+ +M+N+G P+ T+Y+ ++ K +K +E + E +G
Sbjct: 549 ARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMI-----EKSIYDGD 603
Query: 395 CLPN--------------------EITFNYLLKSLKKPEEV------------------P 416
P+ E F L K KP+ V
Sbjct: 604 IFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAH 663
Query: 417 WVLERMERNGCKMSTDTYNVILKLYVN----WDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+L + G + T+N ++ +Y W E+ +R ++ G PD SY +
Sbjct: 664 EMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRM----LQTSGGKPDLVSYNTV 719
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVP 499
I G KG +++ + EM G+ P
Sbjct: 720 IKGFCRKGLMQEGIRILSEMTSIGVGP 746
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 121/257 (47%), Gaps = 10/257 (3%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAI 208
+SP N +NA+L+ L R + V +M + +E +Y ++++ YA V+ I
Sbjct: 534 FSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVK-GI 592
Query: 209 GVFDRRKEFGEL-DDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNG 266
+ ++ G++ + L+L + + + E F++ +K+ + D+ N +L+
Sbjct: 593 EMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSI 652
Query: 267 WCVLGNVYE-AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
+ N+Y+ A + I + +PD VT+ + ++ + G A + + + G KP
Sbjct: 653 FAK-NNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKP 711
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+V+ N +I C K + E + +L EM + G P + TYN+ I + + +
Sbjct: 712 DLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVI 771
Query: 386 DEMEQKNGSCLPNEITF 402
M N C PNE+T+
Sbjct: 772 SYMIVHN--CRPNELTY 786
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 62/134 (46%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ T N +++ + G+ ++A+ + + S +PD V+Y T + +KG + +R+
Sbjct: 677 DLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRIL 736
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M G P + T N I + E +V+ M C PN TY + CK
Sbjct: 737 SEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKA 796
Query: 376 KRMETVYEYLDEME 389
+R + +++ +++
Sbjct: 797 RRYDEAIDFVSKIK 810
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 4/186 (2%)
Query: 171 RFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
R + +Q PDLV + +L+ +A +M + A + + G DL +L+
Sbjct: 629 RAFQALQKHGYKPDLVLCNS---MLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLM 685
Query: 231 LWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
R AE + G D+ + N ++ G+C G + E R ++
Sbjct: 686 DMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVG 745
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P TY TF++ +G + M +P+ +T + D C +R EA++
Sbjct: 746 PCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDF 805
Query: 350 LREMKN 355
+ ++K+
Sbjct: 806 VSKIKD 811
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 193/438 (44%), Gaps = 34/438 (7%)
Query: 81 EFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEA-A 139
E + PG + +V + ++ KGE+EKA +++R R +A A
Sbjct: 256 EMEARPGGCLPSDVTYNVVINGLARKGELEKA-------------AQLVDRMRMSKKASA 302
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYA 199
+TF ++ G ++ GS L + V P +V TY +++
Sbjct: 303 FTFNPLIT--GYFARGSVEKAGALQLEMENEGIV---------PTVV---TYNTIIHGMF 348
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIK 258
+ VE A F + G L DL + +L+ C+ +++ A F + ++ +
Sbjct: 349 RSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVL 408
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T NI+L+G+C LG++ EA+RF +++++ C+PD TY +N K L F M
Sbjct: 409 TYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEM 468
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
KG +PD N I A EA ++ M +RG + TYN + LCK +
Sbjct: 469 LSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNL 528
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYN 435
+ Y M+ + P+ IT+ L+ + + E + + M +G S TY
Sbjct: 529 KDAYVLW--MKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYT 586
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
V + Y +++M ++G+ P++ +Y V+IH L GR A +FHEM +
Sbjct: 587 VFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLER 646
Query: 496 GMVPEPRTGILVNDMNIK 513
G+ P T L+ D N K
Sbjct: 647 GLSPNKYTYTLLIDGNCK 664
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 157/359 (43%), Gaps = 12/359 (3%)
Query: 154 PGSNVFNAILDVL---GRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEEAI 208
P +N +LD GR + +L++ + P L ++ TY +++N A +E+A
Sbjct: 229 PSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAA 288
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF-FESEKNEFGYDIKTMNIILNGW 267
+ DR + + + F L+ VE A E E + T N I++G
Sbjct: 289 QLVDRMRMSKKASAFT-FNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGM 347
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
GNV A+ + ++ PD +TY + +N K G L AL LF + G P V
Sbjct: 348 FRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSV 407
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+T N ++D C + EA +EM +GC P+V+TY L+ K++ + V E+ DE
Sbjct: 408 LTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDE 467
Query: 388 MEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
M K P+ +N + + L E + E M G T TYN+ L
Sbjct: 468 MLSKG--LQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKS 525
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
W +M G+ PD +YT +IH ++GRL +A F M + G+ P T
Sbjct: 526 GNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVT 584
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 161/395 (40%), Gaps = 64/395 (16%)
Query: 118 LTLTDDLIV--NVINRY--RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR----- 168
+ L DLI ++IN Y + + A F + R G +P +N +LD R
Sbjct: 366 MGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAG-LAPSVLTYNILLDGYCRLGDLE 424
Query: 169 -ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
ARRF + + PD+ TY IL+N + FD G D A+
Sbjct: 425 EARRFKQEMVEQGCQPDV---STYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYN 481
Query: 228 N-----LLLWLCRYKHVEVAETFFESE---KNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
L+L +E F +E D T NI L+G C GN+ +A
Sbjct: 482 TRISAELILG-------STSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVL 534
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
W ++ +PD +TY ++A ++G+L A +F M G P VT I A C
Sbjct: 535 WMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCR 594
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ + A ++M G PN TYN LI LC++ R Y++ EM ++ S PN+
Sbjct: 595 RGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLS--PNK 652
Query: 400 ITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
T+ L+ CK NW E+ +R + EM +
Sbjct: 653 YTYTLLID-----------------GNCKEG------------NW--EEAIR-LYSEMHQ 680
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
G+ PD ++ + G +D+G+ + A+ Y + L
Sbjct: 681 HGIHPDHCTHNALFKG-FDEGQSKHAIQYMENVVL 714
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L F+ M G P + CN ++ AL + R + V EM G P++ TYN+L+
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCK 428
+ R++ + L EME + G CLP+++T+N ++ L + E+ +++RM R K
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKK 299
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
S T+N ++ Y +K EME +G+ P +Y +IHG++ G +E A
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359
Query: 489 FHEMRLKGMVPE 500
F EMR G++P+
Sbjct: 360 FVEMRAMGLLPD 371
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 41/283 (14%)
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
IK N++L + + + ++++ EP VTY T +++ ++G++ A +L +
Sbjct: 196 IKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLR 255
Query: 317 AMWEK--GRKPDVVTCNCIIDALCFKKRIPEALEVLR----------------------- 351
M + G P VT N +I+ L K + +A +++
Sbjct: 256 EMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFAR 315
Query: 352 -----------EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
EM+N G +P V TYN++I + + +E EM LP+ I
Sbjct: 316 GSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMG--LLPDLI 373
Query: 401 TFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T+N L+ K +E W+ ++R G S TYN++L Y ++ R +EM
Sbjct: 374 TYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEM 433
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++G PD +YT++++G L +F EM KG+ P+
Sbjct: 434 VEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPD 476
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 175/372 (47%), Gaps = 9/372 (2%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILL 195
A FK + RE P ++ +++ L G ++ +L+++ ++ N Y I++
Sbjct: 161 AVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVI 220
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFG 254
+ + M++ A + + K+ D+ + L+ LC+ E T F E
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIY 280
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T N +++G C G V +A+ + +I+ +PD +TY ++ +G++ A +
Sbjct: 281 PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREI 340
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F +M K +P++++ N +I+ +K+I EA++V RE+ +G P++ T N L+ L +
Sbjct: 341 FDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFE 400
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMST 431
+ R ++ + DEM + +P+ T LL K EE ++ER +
Sbjct: 401 LGRTKSAQNFFDEM--LSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNI 458
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
Y ++ DK T+E++ G+ PD +YT MI G +G L++A +
Sbjct: 459 QIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRK 518
Query: 492 MRLKGMVPEPRT 503
M G + + RT
Sbjct: 519 MEDNGCLADNRT 530
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 125/266 (46%), Gaps = 13/266 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A +++ +G P +N I+D G + ++FD M P+++ +
Sbjct: 300 EDAEEIMRYMIEKG-VDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNII---S 355
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y IL+N YA ++EA+ V + G + LL L + A+ FF+ E
Sbjct: 356 YNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD-EM 414
Query: 251 NEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
G+ D+ T +L G+ G V EA + + + + + + Y ++ L K GKL
Sbjct: 415 LSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKL 474
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A F+ + G PDV+T +I C + + EA ++LR+M++ GCL + TYN +
Sbjct: 475 DKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVI 534
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGS 394
++ + ++ + +L+E+ K+ S
Sbjct: 535 VRGFLRSNKVSEMKAFLEEIAGKSFS 560
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 98/239 (41%), Gaps = 20/239 (8%)
Query: 295 YATFVNALTKKGKLGT------------ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
Y+T +++ KG G A LF+ M P VV+ + ++ AL K
Sbjct: 28 YSTNTRSISVKGNFGVSNEFENVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKH 87
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP-NEIT 401
+ + RE+ + + ++ C + R + + L + K G +P N++
Sbjct: 88 YSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVL-AIHFKKG--IPFNQVI 144
Query: 402 FNYLLKSL---KKPEEVPWVLERMER-NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
FN LL+ L K ++ + +++ R N C+ + Y ++ K M
Sbjct: 145 FNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLM 204
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKE 516
E+ P+ Y+++I G L+ A S +EM+ K + P+ T + D KL +
Sbjct: 205 EQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ 263
>gi|42567170|ref|NP_194410.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659854|gb|AEE85254.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 369
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 174/335 (51%), Gaps = 12/335 (3%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V + L+N + ++ +++A+ V + ++ G D+ L+ LC+ + V A
Sbjct: 11 PDIVTASS---LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 243 ETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ K+ ++ T + ++ G C G + +A+R ++ K P+ +T++ ++A
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K+GKL +++ M + P+V T + +I LC R+ EA+++L M ++GC PN
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---V 418
V TY++L K R++ + LD+M Q+ + N ++ N L+K + ++ V
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAA--NTVSCNTLIKGYFQAGKIDLALGV 245
Query: 419 LERMERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
M NG + +YN++L L+ N + E K +E M+K D +YT+MIHG+
Sbjct: 246 FGYMTSNGLIPNIRSYNIVLAGLFANGEVE-KALSRFEHMQKTRNDLDIITYTIMIHGMC 304
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMN 511
+++A F++++ K + P+ + I++ ++N
Sbjct: 305 KACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELN 339
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 17/255 (6%)
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
++K EPD VT ++ VN + A+ + M + G K DVV +ID LC +
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ ALEVL+ MK+RG PNV TY+SLI LCK R+ L EM+ K + PN ITF
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKIN--PNVITF 121
Query: 403 NYLLKSLKKPEEVPWVLERMERNGCKMSTD----TYNVILKLYVNWDCEDKVRHTWEEME 458
+ L+ + K ++ V + + + +MS D TY+ ++ + D+ + M
Sbjct: 122 SALIDAYAKRGKLSKV-DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDM--NIKLKE 516
KG P+ +Y+ + +G + R++D + +M P+ G+ N + N +K
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM--------PQRGVAANTVSCNTLIKG 232
Query: 517 RGEQGKKVIKLTSLG 531
+ GK + L G
Sbjct: 233 YFQAGKIDLALGVFG 247
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
+P ++ + + ++ R + I++ D+MP N + L+ Y A ++ A+G
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALG 244
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWC 268
VF G + ++ ++ +L L VE A + FE +K DI T I+++G C
Sbjct: 245 VFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMC 304
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
V EA + + + EPD Y + L + G
Sbjct: 305 KACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 126/255 (49%), Gaps = 13/255 (5%)
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
GY D+ T I+NG C +G A +K + ++ C+PD VTY+T +++L K ++ A
Sbjct: 5 GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L +F M KG P++ T N +I LC R EA +L EM + +PN+ T++ LI
Sbjct: 65 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124
Query: 372 LCK---IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERN 425
CK + V + + EM + PN +T++ L+ EV + + M
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVE-----PNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
GCK +YN+++ Y + + + EM +G+ PD SY +I GL GRL +A
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239
Query: 486 LSYFHEMRLKGMVPE 500
F M G +P+
Sbjct: 240 HDLFKNMLTNGNLPD 254
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 159/328 (48%), Gaps = 15/328 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
Y P + + I++ L + V +F +M PD+V TY +++ V
Sbjct: 6 YQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVV---TYSTIIDSLCKDRRVN 62
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIIL 264
EA+ +F K G ++ + +L+ LC + E + E +I T ++++
Sbjct: 63 EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI 122
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N +C GNV+EA+ K + + EP+ VTY++ +N + + ++ A +LF M KG K
Sbjct: 123 NIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCK 182
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDV + N +I+ C KRI EA ++ EM ++G P++ +YN+LI LC++ R+ ++
Sbjct: 183 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL 242
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLY 441
M NG+ LP+ T++ LL K + + M+ K + YN+++
Sbjct: 243 FKNM-LTNGN-LPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
+ R + E+ +G+ P+ + +
Sbjct: 301 CKSRNLKEARKLFSELFVQGLQPNMKHW 328
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 36/219 (16%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M +G +PDV T II+ LC A + ++M GC P+V TY+++I LCK +R
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 378 METVYEYLDEMEQKN-------------GSC--------------------LPNEITFNY 404
+ + M+ K G C +PN +TF+
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 405 LLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ K E VL+ M G + + TY+ ++ Y + R ++ M KG
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
PD SY ++I+G R+ +A F+EM +G+ P+
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPD 219
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 185/386 (47%), Gaps = 29/386 (7%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMV---------EEAIG 209
N +L+VL + +RF + +F +++++GI N + +V E A
Sbjct: 156 LNTLLNVLIQNQRFDLVHAMFKN-----SKESFGITPNIFTCNLLVKALCKKNDIESAYK 210
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWC 268
V D G + +L + +L +E A+ E + Y D T ++++G+C
Sbjct: 211 VLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYC 270
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
LG EA D+ K++ EP+ VTY + AL K+ K G A +F M ++ PD
Sbjct: 271 KLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSS 330
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
C +IDALC ++ EA + R+M C+P+ ++LI LCK R+ + DE
Sbjct: 331 LCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEF 390
Query: 389 EQKNGSCLPNEITFNYLLKSL-KKPE--EVPWVLERMERNGCKMSTDTYNVILK-LYVNW 444
++ GS +P+ +T+N L+ + +K E E + + M CK + TYNV+++ L N
Sbjct: 391 DK--GS-IPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNG 447
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTG 504
+ ++ VR EEM + G P++ ++ ++ GL G+ EDA+ + G V +
Sbjct: 448 NVKEGVR-VLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNGKVDKESWE 506
Query: 505 ILVNDMNIKLKERGEQGKKVIKLTSL 530
+ +N K GE K V+ L L
Sbjct: 507 LFLN------KFVGELDKGVLALKEL 526
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 164/361 (45%), Gaps = 25/361 (6%)
Query: 150 GDYSPG----SNVFNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAA 200
G PG + +++IL L RAR F + + ++ P E + LL Y
Sbjct: 71 GKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGL 130
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIK 258
A E ++ +F R +FG + + LL L + + ++ F++ K FG +I
Sbjct: 131 AGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIF 190
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N+++ C ++ A + +I P+ VTY T + +G + +A R+ + M
Sbjct: 191 TCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 250
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
++G PD +T ++D C R EA V+ +M+ PN TY +I+ LCK K+
Sbjct: 251 LDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 310
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN 435
DEM + S +P+ ++ +L K +E + +M +N C N
Sbjct: 311 GEARNMFDEMLDR--SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD----N 364
Query: 436 VILKLYVNWDCED----KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
+L ++W C++ + R ++E + KG P +Y +I G+ +KG L +A + +
Sbjct: 365 ALLSTLIHWLCKEGRVSEARKLFDEFD-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 423
Query: 492 M 492
M
Sbjct: 424 M 424
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 148/309 (47%), Gaps = 7/309 (2%)
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILN 265
I +F + + G DL L+ C H+ A + F + K + + T+N ++
Sbjct: 80 VISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIK 139
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G + A F ++ + D V+Y T +N L K G+ RL + + KP
Sbjct: 140 GLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKP 199
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+V II LC K + +A ++ EM +G PNV TY +LI C + ++ + L
Sbjct: 200 DLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLL 259
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+EM+ KN + P+ TFN L+ +L K +E + E M+ + TY ++
Sbjct: 260 NEMKLKNIN--PDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLC 317
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
++ ++M+++G+ P+ SYT+++ L GRLE+A +F + +KG R
Sbjct: 318 KNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVR 377
Query: 503 T-GILVNDM 510
T +++N +
Sbjct: 378 TYNVMINGL 386
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 158/360 (43%), Gaps = 15/360 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +FN IL L + +R+ +I +F + PDL T IL+N + + A
Sbjct: 59 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLC---TLSILINCFCHLTHITFA 115
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
VF + G + L+ LC ++ A F + + F D + ++NG
Sbjct: 116 FSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLING 175
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G R + + +PD V Y T ++ L K LG A L+ M KG P+
Sbjct: 176 LCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPN 235
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V T +I C + EA +L EMK + P+V T+N LI L K +++ +
Sbjct: 236 VFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFE 295
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM+ KN PN +T+ L+ L K E + ++M+ G + + +Y ++L
Sbjct: 296 EMKHKN--MFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCK 353
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + ++ + KG + R+Y VMI+GL G D + +M KG +P T
Sbjct: 354 GGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAIT 413
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 151/331 (45%), Gaps = 10/331 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILL 195
A++ F + + G Y P + N ++ L G +R + +++ +YG L+
Sbjct: 115 AFSVFANILKRG-YHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLI 173
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFG 254
N A + + + + DL + ++ LC+ K + + + + E
Sbjct: 174 NGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGIS 233
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
++ T +++G+C++GN+ EA ++ PD T+ ++AL K+GK+ A+ L
Sbjct: 234 PNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSL 293
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F+ M K P++VT +ID LC + A+ + ++MK +G PNV +Y L+ LCK
Sbjct: 294 FEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCK 353
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMST 431
R+E ++ + K N T+N ++ L K V++ +ME GC +
Sbjct: 354 GGRLENAKQFFQHLLVKGYHL--NVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNA 411
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
T+ I+ + D DK EM +G+
Sbjct: 412 ITFKTIICALLEKDENDKAEKFLREMIARGL 442
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 136/298 (45%), Gaps = 6/298 (2%)
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK-HVEVAETFFESEKNEFGYDIKTMNIIL 264
+A+ F+R F N+L L + K + V F + E N D+ T++I++
Sbjct: 44 DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N +C L ++ A + +I+K P+++T T + L G++ AL + +G +
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
D V+ +I+ LC +LR+++ P++ Y ++I LCK K + +
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223
Query: 385 LDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
EM K S PN T+ L+ + +E +L M+ T+N+++
Sbjct: 224 YSEMIVKGIS--PNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDAL 281
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ +EEM+ K M P+ +YT +I GL LE A++ +M+ +G+ P
Sbjct: 282 AKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQP 339
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 19/240 (7%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P + + +++L K + T + LF+ G PD+ T + +I+ C I A V
Sbjct: 59 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+ RG PN T N+LIK LC ++ + D++ + +++++ L+ L
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQL--DQVSYGTLINGL 176
Query: 410 KKPEE---VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR----HTWEEMEKKGM 462
K E V +L ++E + K Y I ++ C++K+ + EM KG+
Sbjct: 177 CKAGETKAVARLLRKLEGHSVKPDLVMYTTI----IHCLCKNKLLGDACDLYSEMIVKGI 232
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
P+ +YT +IHG G L++A S +EM+LK + P+ V NI + ++GK
Sbjct: 233 SPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPD------VYTFNILIDALAKEGK 286
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 193/426 (45%), Gaps = 70/426 (16%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV-------ELIQ-------------V 178
A F VSR D + +++AI+ VL A+ + +LIQ V
Sbjct: 53 ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSV 112
Query: 179 FDEMPDLVNEK----TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ--NLLL- 231
F+ + L + K +G+L+ ++ +VEEA+ V+ + +D L A Q N++L
Sbjct: 113 FNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYK------MDVLPAMQACNMVLD 166
Query: 232 -WLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
+ + + + + + + ++ T +++G C G+ +A R + ++I+ K P
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP 226
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
V Y + L + ++ A +F+ M G P++ T N ++D C + +ALE+
Sbjct: 227 TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ-------------KNGSC-- 395
+EM G LPNV T+ LI LCK M + ++L +M +G C
Sbjct: 287 QEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKA 346
Query: 396 ------------------LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTY 434
LP+ T++ L+K L + EE +L+ M++ G + TY
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N ++ Y +K +M +KG+ P+ +++ +I G G++E A+ + EM +
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466
Query: 495 KGMVPE 500
KG++P+
Sbjct: 467 KGLLPD 472
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 193/465 (41%), Gaps = 75/465 (16%)
Query: 103 VSTKGEIEKALNQCELTLTDDLIVNVINRYRFD--WEAAYTFFKWVSREGDYSPGSNVFN 160
V K ++ A+ C + L ++ + RFD W+ + V+R SP +
Sbjct: 148 VYYKMDVLPAMQACNMVLD-----GLVKKGRFDTMWK---VYGDMVARGA--SPNVVTYG 197
Query: 161 AILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
++D R F++ ++FDEM P +V Y IL+ + EA +F
Sbjct: 198 TLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV---IYTILIRGLCGESRISEAESMFRTM 254
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-------------------------- 248
+ G L +L + ++ C+ HV+ A ++
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314
Query: 249 --------EKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
+ FG +I N +++G+C GN+ EA +I K + PD TY+
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
+ L ++ A L Q M +KG P+ VT N +ID C + + +A+EV +M +G
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEV 415
PN+ T+++LI CK +ME EM K LP+ + + L+ K +E
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG--LLPDVVAYTALIDGHFKDGNTKEA 492
Query: 416 PWVLERMERNGCKMSTDTYNVI-------------LKLYVNWDCEDKVRHTWEEMEKKGM 462
+ + M+ G + T + + +KL++ D E+++
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLC 552
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
P+ YT +I GL GR+ A +F +MR G+ P+ T I++
Sbjct: 553 SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVI 597
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 28/257 (10%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
E A + + ++G + P + +N ++D + + I+V +M P+++
Sbjct: 384 MEEADGLLQEMKKKG-FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNII--- 439
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF-FES 248
T+ L++ Y A +E A+G++ G L D+ A+ L+ +K E F
Sbjct: 440 TFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG--HFKDGNTKEAFRLHK 497
Query: 249 EKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFW-------------KDIIKSKCEPDSV 293
E E G ++ T++ +++G C G + +A + + ++ +S C P+ V
Sbjct: 498 EMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHV 557
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
Y + L G++ A + F M G +PDV TC II + + + + ++
Sbjct: 558 MYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADI 617
Query: 354 KNRGCLPNVTTYNSLIK 370
G +PN + Y L K
Sbjct: 618 LKMGIIPNSSVYRVLAK 634
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 166/336 (49%), Gaps = 16/336 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILD---VLGRARRFVELIQ--VFDEM-PDLVNEKT 190
+ AY + + +G SP ++ ++ ++G+ R ++L+ V + + PD+ T
Sbjct: 215 DEAYDLYTEMVGKG-ISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDI---YT 270
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE-TFFESE 249
Y IL++ V+EA V + D+ + L+ C V A+ F+
Sbjct: 271 YTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMT 330
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ D+ +I++NG C + V EA +++I + PD+VTY + ++ L K G++
Sbjct: 331 QMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRIS 390
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
LF M ++G+ PDV+T N +IDALC + A+ + +MK++ PNV T+ L+
Sbjct: 391 YVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILL 450
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
LCK+ R++ E+ ++ K G CL N T+ ++ L K +E + RME NG
Sbjct: 451 DGLCKVGRLKNALEFFQDLLTK-GYCL-NVRTYTVMINGLCKEGLLDEALALQSRMEDNG 508
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
C T+ ++++ + + D DK EM +G+
Sbjct: 509 CISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 156/326 (47%), Gaps = 7/326 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
+YGIL+N AI + R + + ++ + ++ LC+ V+ A + + E
Sbjct: 165 SYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEM 224
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
D+ T +I+++G+C++G + A +++ PD TY V+AL K+GK+
Sbjct: 225 VGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKV 284
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A + M + DVV + ++D C + A V M G P+V Y+ +
Sbjct: 285 KEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIM 344
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV---LERMERN 425
I LCKIKR++ +E+ QKN +P+ +T+ L+ L K + +V + M
Sbjct: 345 INGLCKIKRVDEALNLFEEIHQKN--MVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDR 402
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G TYN ++ D+ + +M+ + + P+ ++T+++ GL GRL++A
Sbjct: 403 GQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNA 462
Query: 486 LSYFHEMRLKGMVPEPRT-GILVNDM 510
L +F ++ KG RT +++N +
Sbjct: 463 LEFFQDLLTKGYCLNVRTYTVMINGL 488
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 159/355 (44%), Gaps = 15/355 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +++ I+D L + E ++ EM PD+V TY IL++ + + A
Sbjct: 196 PNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVV---TYSILVSGFCIVGQLNRA 252
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNG 266
I + + D+ + L+ LC+ V+ AE K D+ + +++G
Sbjct: 253 IDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDG 312
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C++ V AKR + + + PD Y+ +N L K ++ AL LF+ + +K PD
Sbjct: 313 YCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPD 372
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VT +ID LC RI ++ EM +RG P+V TYN+LI LCK ++ +
Sbjct: 373 TVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFN 432
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERME---RNGCKMSTDTYNVILKLYVN 443
+M K+ + PN TF LL L K + LE + G ++ TY V++
Sbjct: 433 KM--KDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCK 490
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D+ ME G D ++ +MI +DK + A EM +G++
Sbjct: 491 EGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 158/342 (46%), Gaps = 6/342 (1%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
+G R + L++ + N Y ++++R +V+EA ++ G D+
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235
Query: 226 FQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ C + A + E DI T I+++ C G V EA+ ++
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
K+ D V Y+T ++ ++ A R+F M + G PDV + +I+ LC KR+
Sbjct: 296 KACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVD 355
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EAL + E+ + +P+ TY SLI LCK R+ V++ DEM + P+ IT+N
Sbjct: 356 EALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQP--PDVITYNN 413
Query: 405 LLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ +L K + + +M+ + + T+ ++L ++++ KG
Sbjct: 414 LIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKG 473
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ R+YTVMI+GL +G L++AL+ M G + + T
Sbjct: 474 YCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVT 515
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 149/342 (43%), Gaps = 41/342 (11%)
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKT 259
H ++A+ F+ F +L+ L K A + + + E +E D T
Sbjct: 36 THNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFT 95
Query: 260 MNIILN-----------------------------------GWCVLGNVYEAKRFWKDII 284
+NII+N G C+ G V EA RF ++
Sbjct: 96 LNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVL 155
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
++Y +N + K G+ A+RL + + +P+VV + IID LC +
Sbjct: 156 AQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVD 215
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA ++ EM +G P+V TY+ L+ C + ++ + L+EM +N + P+ T+
Sbjct: 216 EAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENIN--PDIYTYTI 273
Query: 405 LLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+ +L K +E VL M + + Y+ ++ Y + + + + M + G
Sbjct: 274 LVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMG 333
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ PD Y++MI+GL R+++AL+ F E+ K MVP+ T
Sbjct: 334 VTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVT 375
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 10/214 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + ++ +++ L + +R E + +F+E+ PD V TY L++ + +
Sbjct: 335 TPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTV---TYTSLIDCLCKSGRISY 391
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILN 265
+FD + G+ D+ + NL+ LC+ H++ A F K++ ++ T I+L+
Sbjct: 392 VWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLD 451
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C +G + A F++D++ + TY +N L K+G L AL L M + G
Sbjct: 452 GLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCIS 511
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
D VT +I A K +A +++REM RG L
Sbjct: 512 DAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 215/485 (44%), Gaps = 65/485 (13%)
Query: 66 TAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLI 125
T +L+HSLAN+ S+ + + + ++ S I A++ C+ + +I
Sbjct: 104 TFKLLHSLANAKRYSKIRSF--------LDGFVRNGSDHQVHSIFHAISMCDNVCVNSII 155
Query: 126 VNVI-------NRYRFDWEA----AYTFFKWVS--------------REGDY-------- 152
+++ +R+ +EA Y +K + R D
Sbjct: 156 ADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMI 215
Query: 153 ----SPGSNVFNAILDVL------GRARRFVELIQVFDEMPDLVNEKTYGILLNRY---A 199
P FN +++ L +AR +E ++V+ P++V +Y L++ Y
Sbjct: 216 RRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVV---SYNTLIDGYCKLG 272
Query: 200 AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIK 258
+ +A V E +L+ F L+ + ++ + + F E + ++
Sbjct: 273 GNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVI 332
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N ++NG C G + EA ++ + +P+ +TY + +N K G + AL +F ++
Sbjct: 333 TYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSV 392
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
+G +P N +IDA C +I + + EM+ G +P+V TYN LI LC+ +
Sbjct: 393 KGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYN 435
E + D++ K LP+ +TF+ L++ S + + +L+ M + G K TYN
Sbjct: 453 EAAKKLFDQLTNKG---LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 436 VILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+++K Y + +MEK + + + SY V++ G KG+LEDA +EM
Sbjct: 510 IMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Query: 495 KGMVP 499
KG+VP
Sbjct: 570 KGLVP 574
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 170/383 (44%), Gaps = 29/383 (7%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD------------------EMP 183
++ W+ + D S + +L L A+R+ ++ D M
Sbjct: 87 YYTWLVKNRDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMC 146
Query: 184 D--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG-ELDDLSAFQNLLLWLCRYKHVE 240
D VN +L+ YA E F R +G +L +S ++ L + + +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSAD 206
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
V + E + + ++ T N+++N C G + +A+ +D+ P+ V+Y T ++
Sbjct: 207 VEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLID 266
Query: 301 ALTK---KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
K GK+ A + + M E P++ T N +ID +P +L+V +EM ++
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQD 326
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EE 414
+PNV TYNSLI LC ++ D+M + PN IT++ L+ K +E
Sbjct: 327 VIPNVITYNSLINGLCNGGKINEAIGMRDKMV--SAGVQPNLITYHSLINGFCKNGMMKE 384
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+ + ++ G + +T YN+++ Y D EEME++G+ PD +Y +I
Sbjct: 385 ALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Query: 475 GLYDKGRLEDALSYFHEMRLKGM 497
GL G +E A F ++ KG+
Sbjct: 445 GLCRNGNIEAAKKLFDQLTNKGL 467
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
AL K+ + L++ M + +P+V T N +I+ALC ++ +A +V+ +MK G P
Sbjct: 197 ALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSP 256
Query: 361 NVTTYNSLIKHLCKIKRMETVYE---YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW 417
NV +YN+LI CK+ +Y+ L EM + S PN TFN L+ K + +P
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVS--PNLTTFNILIDGFWKDDNLPG 314
Query: 418 ---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
V + M + TYN ++ N ++ ++M G+ P+ +Y +I+
Sbjct: 315 SLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLIN 374
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKL 514
G G +++AL F ++ +G P R ++ D KL
Sbjct: 375 GFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKL 414
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 106/272 (38%), Gaps = 80/272 (29%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
D P +N++++ L + E I + D+M P+L+ TY L+N + M+
Sbjct: 326 DVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLI---TYHSLINGFCKNGMM 382
Query: 205 EEAIGVFDRRK-------------------EFGELDD----------------LSAFQNL 229
+EA+ +FD K + G++DD + + L
Sbjct: 383 KEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 230 LLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
+ LCR ++E A+ F+ N+ D+ T +I++ G+C G +A K++ K +
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLK 502
Query: 290 PDSVTY---------------AT---------------------FVNALTKKGKLGTALR 313
P +TY AT + ++KGKL A
Sbjct: 503 PRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
L M EKG P+ +T + + + K +P+
Sbjct: 563 LLNEMLEKGLVPNRITYEIVKEEMVDKGFVPD 594
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 158/358 (44%), Gaps = 9/358 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP F +++D LG+ R + ++++ M D + N Y L+ + E+
Sbjct: 337 SPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHK 396
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWC 268
++ G DL + + + E FE K F D ++ +I+++
Sbjct: 397 MYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLV 456
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G E + + C D+ Y T ++ K GK+ A +L + M G P VV
Sbjct: 457 KAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVV 516
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T ++D L R+ EA + E K+ G N Y+SLI K+ R++ Y ++EM
Sbjct: 517 TYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEM 576
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWD 445
QK + PN T+N LL L K EE+ L + M+ C + TY +++
Sbjct: 577 MQKGLT--PNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVR 634
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+K W+EM+K+G+ P+ +YT MI GL G + A S F R G +P+ +
Sbjct: 635 KFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSAS 692
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 176/424 (41%), Gaps = 55/424 (12%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVI-------NRYRFDW-EAAYTFFKWVSREGDYS 153
+ +G ++ A E L D I NV+ N ++ D E + +K + R G S
Sbjct: 349 GLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSG-CS 407
Query: 154 PGSNVFNAILDVLGRA------RRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P + N +D + +A R E I+ +PD ++Y IL++ A E
Sbjct: 408 PDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPD---TRSYSILIHSLVKAGFARET 464
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
++ K+ G + D A+ ++ C+ V A E E G+ + T +++
Sbjct: 465 YELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLE-EMKTMGHHPTVVTYGSVVD 523
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G + + EA +++ + E + V Y++ ++ K G++ A + + M +KG P
Sbjct: 524 GLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTP 583
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+V T NC++D L + I EAL + MK+ C PN TY LI LCK+++ + +
Sbjct: 584 NVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFW 643
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
EM QK G PN IT+ ++ L K V
Sbjct: 644 QEM-QKQG-LKPNTITYTAMISGLAKSGNVA----------------------------- 672
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
+ +E G PD SY MI GL R DA F E RLKG +T +
Sbjct: 673 ---QASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCV 729
Query: 506 LVND 509
+ D
Sbjct: 730 ALLD 733
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 163/369 (44%), Gaps = 9/369 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+ A+ FF + G P + +++ VL +A R E +++F++M + Y
Sbjct: 148 DMAWKFFHEMKANG-LVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNT 206
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
++ Y +A +EA + +R++ G + + A+ +L L + + A FE K +
Sbjct: 207 MIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDA 266
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
++ T NII+ C GNV A + + ++ P+ T ++ L K KL A
Sbjct: 267 MPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACS 326
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+F+ M K PD T +ID L + R+ +A + M + +PNV Y SLI++
Sbjct: 327 IFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFF 386
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMS 430
K R E ++ EM + C P+ + N + + K E + E ++ G
Sbjct: 387 KCDRKEDGHKMYKEMMRS--GCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPD 444
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
T +Y++++ V + + M+ +G D R+Y +I G G++ A
Sbjct: 445 TRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLE 504
Query: 491 EMRLKGMVP 499
EM+ G P
Sbjct: 505 EMKTMGHHP 513
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 163/401 (40%), Gaps = 51/401 (12%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
+E Y ++ ++ V R R + + DEM D+V Y + ++ +
Sbjct: 88 QELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIV---LYNVCIDCFGKV 144
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTM 260
V+ A F K G + D + +++ LC+ + E E F + E+N
Sbjct: 145 GKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAY 204
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N ++ G+ G EA + C P V Y + L KKGK ALR+F+ M +
Sbjct: 205 NTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-K 263
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+ P++ T N II LC + A +V MK G PNV T N +I LCK ++++
Sbjct: 264 RDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDE 323
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKK----------------PEEVPWVL----- 419
+ M+ K C P+ TF L+ L K +++P V+
Sbjct: 324 ACSIFEGMDYK--VCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSL 381
Query: 420 -----------------ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ M R+GC N + +K R +EE++ +G
Sbjct: 382 IRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGF 441
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
PD RSY+++IH L G + ++ M+ +G V + R
Sbjct: 442 LPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRA 482
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 204/450 (45%), Gaps = 44/450 (9%)
Query: 81 EFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTD--------DLIVNVINRY 132
E QR G ++ N + TC + KG+ +KAL E D ++I+ ++ +
Sbjct: 225 ERQRAKGCIPSVVAYNCILTC-LGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKA 283
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV---NEK 189
+ EAA+ + +E P N ++D L +A++ E +F+ M V +
Sbjct: 284 G-NVEAAFKV-RDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGA 341
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
T+ L++ V++A +++R + ++ ++ + +L+ FF+ +
Sbjct: 342 TFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLI------------RNFFKCD 389
Query: 250 KNEFGY-------------DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
+ E G+ D+ +N ++ G + + +++I PD+ +Y+
Sbjct: 390 RKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYS 449
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+++L K G L+ AM ++G D N +ID C ++ +A ++L EMK
Sbjct: 450 ILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTM 509
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---E 413
G P V TY S++ L KI R++ Y +E + NG L N++ ++ L+ K +
Sbjct: 510 GHHPTVVTYGSVVDGLAKIDRLDEAYMLFEE-AKSNGIEL-NQVIYSSLIDGFGKVGRVD 567
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
E V+E M + G + T+N +L V + ++ ++ M+ P+Q +Y ++I
Sbjct: 568 EAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILI 627
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+GL + A ++ EM+ +G+ P T
Sbjct: 628 NGLCKVRKFNKAFVFWQEMQKQGLKPNTIT 657
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 165/372 (44%), Gaps = 8/372 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGVF 211
P +N IL LG+ + + +++F+EM + N TY I++ A VE A V
Sbjct: 234 PSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVR 293
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF-GYDIKTMNIILNGWCVL 270
D KE G ++ ++ LC+ + ++ A + FE + D T +++G
Sbjct: 294 DAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQ 353
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G V +A R ++ ++ + P+ V Y + + K + ++++ M G PD++
Sbjct: 354 GRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLL 413
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +D + + + E+K RG LP+ +Y+ LI L K YE M
Sbjct: 414 NTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAM-- 471
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
K+ C+ + +N ++ K +V +LE M+ G + TY ++ D
Sbjct: 472 KDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRL 531
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
D+ +EE + G+ +Q Y+ +I G GR+++A EM KG+ P T +
Sbjct: 532 DEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCL 591
Query: 508 NDMNIKLKERGE 519
D +K +E E
Sbjct: 592 LDGLVKAEEINE 603
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 150/336 (44%), Gaps = 13/336 (3%)
Query: 174 ELIQVFDEMPDLVNEK------TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
+LI+ FD + + + K Y L+ + + + +F++ +E G ++
Sbjct: 41 KLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLT 100
Query: 228 NLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
L+ R V+ A + E + N F DI N+ ++ + +G V A +F+ ++ +
Sbjct: 101 TLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKAN 160
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
PD VTY + + L K +L A+ +F+ M + + P N +I + EA
Sbjct: 161 GLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEA 220
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
+L + +GC+P+V YN ++ L K + + +EM++ +PN T+N ++
Sbjct: 221 YSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKR---DAMPNLPTYNIII 277
Query: 407 KSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
L K V V + M+ G + T N+++ D+ +E M+ K
Sbjct: 278 GMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCS 337
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
PD ++ +I GL +GR++DA + M +P
Sbjct: 338 PDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIP 373
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 171/359 (47%), Gaps = 14/359 (3%)
Query: 128 VINRY--RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD- 184
VIN Y R +EAA FK + ++ + P +N+ + L + RR E V ++ +
Sbjct: 258 VINGYCLRGKFEAASKIFKTM-KDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLES 316
Query: 185 --LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
+ N TY L++ +++A D G + + + L+ L K +E A
Sbjct: 317 GLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEA 376
Query: 243 ETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
E + E E G D+ T NI +NG+C GN +A + ++++ P TY + ++
Sbjct: 377 EDMIK-EMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLID 435
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
K+ ++ A F+ ++G PD++ N +ID C I A ++L+EM N +P
Sbjct: 436 VFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVP 495
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE 420
+ T+N+L++ C+ +++E + LDEM+++ P+ I++N L+ K ++ LE
Sbjct: 496 DEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIK--PDHISYNTLISGYSKRGDMKDALE 553
Query: 421 ---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
M G + TYN +++ Y D EM+ KG+ PD +Y +I +
Sbjct: 554 VFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 178/396 (44%), Gaps = 13/396 (3%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
+T ++++N++ R W+ A F + G P +N +++ +F ++F
Sbjct: 218 VTFNIMINILCR-EGKWKKAKDFIGHMEVYG-VKPNVVTYNTVINGYCLRGKFEAASKIF 275
Query: 180 DEMPDLVNEK----TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
M D N K TY ++R +EEA GV + E G + + + L+ C
Sbjct: 276 KTMKD-KNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCN 334
Query: 236 YKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
++ A + + N + T N++++ + + EA+ K++ + EPD VT
Sbjct: 335 KGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVT 394
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y +N + G AL LF M EK +P V T +ID + R+ EA E ++
Sbjct: 395 YNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSI 454
Query: 355 NRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KK 411
G LP++ +N+LI C ++ ++ L EM+ N +P+E+TFN L++ +K
Sbjct: 455 KEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMD--NAKVVPDEVTFNTLMQGYCRERK 512
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
EE +L+ M+ G K +YN ++ Y ++EM G P +Y
Sbjct: 513 VEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNA 572
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
+I G G + A EM+ KG+ P+ T + V
Sbjct: 573 LIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYV 608
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 123/247 (49%), Gaps = 5/247 (2%)
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
I T NI++N C G +AK F + +P+ VTY T +N +GK A ++F+
Sbjct: 217 IVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFK 276
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M +K KPD T N I LC ++RI EA VL ++ G +PN TYN+LI C
Sbjct: 277 TMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKG 336
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDT 433
++ + Y DEM N + + T+N L+ +L K+ EE +++ M G + T
Sbjct: 337 DLDKAFAYRDEM--MNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVT 394
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
YN+ + Y K ++EM +K + P +YT +I + R+ +A F +
Sbjct: 395 YNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSI 454
Query: 494 LKGMVPE 500
+GM+P+
Sbjct: 455 KEGMLPD 461
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 167/375 (44%), Gaps = 25/375 (6%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--------------PDLVNEKTYGIL 194
E D P F +++ + + RR + ++V ++M PD+V Y L
Sbjct: 333 EMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVV---IYNTL 389
Query: 195 LNRYAAAHMVEEAIGVFDR-RKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNE 252
++ +E +G+ +R R + G D + L+ C+ +E E F E K
Sbjct: 390 IDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEG 449
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
++ T+N ++ G C G V A F+ + + + D+VTY +NA A+
Sbjct: 450 VAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAM 509
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
LF M + G PD + +I R+ +A VL E+K G P+ YN+LI
Sbjct: 510 ELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGF 569
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKM 429
C+ + V+E L EME+ P+ IT+N L+ K ++ + V+ +M + G
Sbjct: 570 CRTNKFHRVFEMLKEMEE--AGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVP 627
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKG-MGPDQRSYTVMIHGLYDKGRLEDALSY 488
+ TY ++ Y ++ +++M+ + P+ Y ++I+ L +++ A+S
Sbjct: 628 TVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSL 687
Query: 489 FHEMRLKGMVPEPRT 503
+M++ G+ P T
Sbjct: 688 MEDMKIWGVTPNTTT 702
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 144/306 (47%), Gaps = 20/306 (6%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTY 191
+A FF R G + + A+++ F + +++F+EM PD + Y
Sbjct: 472 SAVNFFVEAQRRG-MKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAI---VY 527
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEK 250
L++ ++ A + +A V K+ G D + L+ CR K V E E E+
Sbjct: 528 YTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEE 587
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
D T N ++ G++ A++ + +IK+ P TY +NA G
Sbjct: 588 AGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNE 647
Query: 311 ALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A+ +F+ M + P+ V N +I++LC ++ A+ ++ +MK G PN TTYN++
Sbjct: 648 AMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIF 707
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER--NGC 427
K L K +E V+E++D M + +C P+ IT L + L E+ ER+++ GC
Sbjct: 708 KGLRDEKDLEKVFEFMDRMIEH--ACNPDYITMEILTEWLSAVGEI----ERLKKFVAGC 761
Query: 428 KMSTDT 433
++S+ T
Sbjct: 762 EVSSST 767
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 12/233 (5%)
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
+ ++IK +S + + L ++G L + M E +P+VVT +I+ +C
Sbjct: 292 LFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMC 351
Query: 339 FKKRIPEALEVLREM---KNRGCL-----PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+R+ +ALEVL +M K G + P+V YN+LI LCK+ R + ++ M
Sbjct: 352 KFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRS 411
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ G C P+ IT+N L+ K E+ + + M + G + T N ++
Sbjct: 412 QKG-CAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRV 470
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ + E +++GM D +YT +I+ + E A+ F+EM G P+
Sbjct: 471 SSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPD 523
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 176/374 (47%), Gaps = 14/374 (3%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRY 198
FK + G + G + +++++ F + ++ + ++ E+++ ++ Y
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAY 122
Query: 199 AAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCR----YKHVEVAETFFESEKN-E 252
AH+ E+A+ +F R EF + +F ++L + ++ +E + S N
Sbjct: 123 GKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ + N+++ C LG V A ++ + + KC PD TY T ++ L K+ ++ A+
Sbjct: 183 ISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L M +G P V N +ID LC K + +++ M +GC PN TYN+LI L
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGL 302
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
C +++ L+ M + C+PN++T+ L+ L ++ + +L ME G ++
Sbjct: 303 CLKGKLDKAVSLLERM--VSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRL 360
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ Y+V++ ++ W++M +KG P+ Y+ +I GL +G+ +A
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEIL 420
Query: 490 HEMRLKGMVPEPRT 503
+ M G +P T
Sbjct: 421 NGMISSGCLPNVYT 434
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 169/404 (41%), Gaps = 78/404 (19%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEA 207
+ SP FN ++ L + I+VF MP+ L + TY L++ ++EA
Sbjct: 182 NISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE--KNEFGYDIKTMNIILN 265
+ + D + G + L+ LC+ + ++ K F ++ T N +++
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEV-TYNTLIH 300
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK-------------------- 305
G C+ G + +A + ++ SKC P+ VTY T +N L K+
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRL 360
Query: 306 ---------------GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
GK A+ L++ M EKG +P++V + +ID LC + + EA E+L
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEIL 420
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
M + GCLPNV TY+SL+K K E + EM++ C NE ++ L+ L
Sbjct: 421 NGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETG--CSRNEFCYSVLIDGLC 478
Query: 411 KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
V V E M W +M G+ PD +Y+
Sbjct: 479 G---VGRVKEAM-----------------------------MVWSKMLTIGIKPDTVAYS 506
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKL 514
MI GL G ++ AL +HEM + EP++ V NI L
Sbjct: 507 SMIKGLCGIGSMDAALKLYHEMLCQ---EEPKSQPDVVTYNILL 547
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 20/309 (6%)
Query: 241 VAETFFES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
++E F+S + F T++ ++ + LG+ ++ I + E + +F
Sbjct: 59 ISEQMFKSAPKMGSFKLGDSTLSSMIENYANLGDFASVEKLLSRI---RLENRVIIERSF 115
Query: 299 VNALTKKGKLGT---ALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALE----VL 350
+ GK A+ LF M ++ R K V + N +++ + + LE V+
Sbjct: 116 IVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVV 175
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
N PN ++N +IK LCK+ ++ E M +K CLP+ T+ L+ L
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKK--CLPDGYTYCTLMDGLC 233
Query: 411 KPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
K E E +L+ M+ GC S YNV++ +V + M KG P++
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEV 293
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVIK 526
+Y +IHGL KG+L+ A+S M +P T G L+N + +K + + + +I
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGL-VKQRRAMDGARLLIS 352
Query: 527 LTSLGLKGN 535
+ G + N
Sbjct: 353 MEERGYRLN 361
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 212/489 (43%), Gaps = 65/489 (13%)
Query: 66 TAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLI 125
T +++H LANS + S+ + + D++ V+N T S + C L D++
Sbjct: 81 TGKVLHLLANSKKYSKVRSFL-DKL---VKNEKHTVSSVFHSLLLGGDRPCANALITDML 136
Query: 126 VNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--- 182
V + + +A F+ V G + N N +L L + E+ V+ EM
Sbjct: 137 V-LAYVTNLEIHSACEVFRRVQDYG-FKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKR 194
Query: 183 ---PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY--- 236
P+L T+ I +N A + +A V + K +G ++ + L+ C+
Sbjct: 195 RIQPNLT---TFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSA 251
Query: 237 -KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
K E N+ + T N +++G+C NV AK ++++ + +P+ VTY
Sbjct: 252 GKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTY 311
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE--- 352
+ +N L+ GKL A+ L+ M G KP++VT N +I+ C KK I EA ++ +
Sbjct: 312 NSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAE 371
Query: 353 --------------------------------MKNRGCLPNVTTYNSLIKHLCKIKRMET 380
M + G PNV+TYN LI LC+ + +
Sbjct: 372 QDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRA 431
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVI 437
+ L+EME N + +T+N L+ K P + +L M G K + TYN +
Sbjct: 432 AKKLLNEME--NYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTL 489
Query: 438 LKLYV---NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+ Y N KVR +MEK+G + +Y V+I G G+LEDA +EM
Sbjct: 490 MDGYCMEGNLKAALKVR---TQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLE 546
Query: 495 KGMVPEPRT 503
KG+ P T
Sbjct: 547 KGLNPNRTT 555
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 153/348 (43%), Gaps = 48/348 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P FN ++D + + F+EM P++V TY L+N + ++EA
Sbjct: 271 PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIV---TYNSLINGLSNNGKLDEA 327
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
I ++D+ G +I T N ++NG+
Sbjct: 328 IALWDKMVGLG----------------------------------LKPNIVTFNALINGF 353
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C + EA++ + DI + P+++T+ T ++A K G + L +M ++G P+V
Sbjct: 354 CKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNV 413
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
T NC+I LC + + A ++L EM+N +V TYN LI CK + L E
Sbjct: 414 STYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGE 473
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNW 444
M N PN +T+N L+ + L+ +ME+ G + + TYNV++K +
Sbjct: 474 M--LNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKT 531
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ EM +KG+ P++ +Y V+ + +KG + D + + +
Sbjct: 532 GKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIEGHLYNI 579
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 130/272 (47%), Gaps = 7/272 (2%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGIL 194
AA F+ + R+G P +N++++ L + E I ++D+M L N T+ L
Sbjct: 291 AAKNAFEEMQRQG-LKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNAL 349
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG 254
+N + M++EA +FD E + + F ++ C+ +E S +E
Sbjct: 350 INGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGI 409
Query: 255 Y-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
+ ++ T N ++ G C NV AK+ ++ + + D VTY + K G+ A +
Sbjct: 410 FPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEK 469
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
L M G KP+ VT N ++D C + + AL+V +M+ G NV TYN LIK C
Sbjct: 470 LLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFC 529
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
K ++E L+EM +K + PN T++ +
Sbjct: 530 KTGKLEDANRLLNEMLEKGLN--PNRTTYDVV 559
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 128/248 (51%), Gaps = 5/248 (2%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N ++NG C+ G + EA F +I D V+Y T +N L K G+ AL++ + +
Sbjct: 131 TFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKI 190
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
K DVV N II++LC K + +A ++ EM + P+V T+NSLI C + ++
Sbjct: 191 EGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQL 250
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYN 435
+ + EM KN + P+ TF+ L+ +L K + +L M + G TY+
Sbjct: 251 KEAFGLFHEMVLKNIN--PDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYS 308
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++ Y + +K +H + M + G+ P SY +MI+GL +++ALS F EM K
Sbjct: 309 SLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCK 368
Query: 496 GMVPEPRT 503
G+ P+ T
Sbjct: 369 GIAPDTVT 376
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 187/410 (45%), Gaps = 51/410 (12%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A++ F + + G Y P + FN +++ + + E + D + L +++ +Y L+
Sbjct: 113 AFSIFAKILKLG-YHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLI 171
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGEL--DDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNE 252
N A+ + +K G+L D+ + ++ LC+ K V A + + E
Sbjct: 172 NGLCKIGETRAALQML--KKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKR 229
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D+ T N ++ G+CV+G + EA + +++ PD T++ V+AL K G + A
Sbjct: 230 ISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAK 289
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFK-------------------------------- 340
+ M ++G PDVVT + ++D C
Sbjct: 290 NMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGL 349
Query: 341 ---KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
K + EAL + +EM +G P+ TYNSLI LCK+ R+ ++ +DEM NG +P
Sbjct: 350 GKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEM-HNNG--IP 406
Query: 398 NEI-TFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
+I T+N L+ L K + ++++++ G + S TYN+++ +
Sbjct: 407 ADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDV 466
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++++ KG + +Y +MI+GL +G +A +M G++P+ T
Sbjct: 467 FQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVT 516
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 170/355 (47%), Gaps = 23/355 (6%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
++N I++ L + + + Q++ EM PD+V T+ L+ + ++EA G+F
Sbjct: 201 MYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVV---TFNSLILGFCVVGQLKEAFGLF 257
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVL 270
D+ F L+ LC+ ++ A+ K D+ T + +++G+C++
Sbjct: 258 HEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLV 317
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
V +AK + + + P + +Y +N L K + AL LF+ M KG PD VT
Sbjct: 318 NEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTY 377
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +ID LC RI A +++ EM N G ++ TYNSLI LCK ++ + ++
Sbjct: 378 NSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKI-- 435
Query: 391 KNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
K+ P+ T+N L+ L K + V + + G ++ TYN++ +N C+
Sbjct: 436 KDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIM----INGLCK 491
Query: 448 DKVRHTWE----EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ + + E +ME G+ PD +Y +I L+ K E A EM ++G++
Sbjct: 492 EGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 35/222 (15%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P VT+ VN G++ A +F + + G P +T N +I+ +C ++ EAL
Sbjct: 92 PTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHF 151
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+ G + +Y +LI LCKI + L ++E K + + + +N ++ SL
Sbjct: 152 HDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVN--TDVVMYNIIINSL 209
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
K + V +D Y + + EM K + PD ++
Sbjct: 210 CKDKAV---------------SDAYQL-----------------YSEMITKRISPDVVTF 237
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM 510
+I G G+L++A FHEM LK + P+ T ILV+ +
Sbjct: 238 NSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDAL 279
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 173/375 (46%), Gaps = 16/375 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F ++ +G +P +N +L+ V++ +FD M PD T+
Sbjct: 346 ARDVFDTMAMKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY---TFN 401
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
+L+ YA M+++A+ +F+ ++ G D+ ++ ++ LCR ++ A E F +
Sbjct: 402 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 461
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
D N ++ G+C G++ +AK +I+ + D V +++ +N L K G++ A
Sbjct: 462 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 521
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+F G PD V N ++D C ++ +AL V M + G PNV Y +L+
Sbjct: 522 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 581
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL-KKPEEVPWVLE--RMERNGCK 428
CKI R++ EM Q+ P+ I ++ ++ L + VP ++ M +G
Sbjct: 582 YCKIGRIDEGLSLFREMLQRGIK--PSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIA 639
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
M TYN++L+ C D+ ++E+ + + + MI G++ R+E+A
Sbjct: 640 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 699
Query: 489 FHEMRLKGMVPEPRT 503
F + +VP T
Sbjct: 700 FASISRSRLVPSVVT 714
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 150/321 (46%), Gaps = 9/321 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY IL++ AH E A+ F + G ++ +LL C K + A
Sbjct: 116 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHR 175
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNALTKK 305
E G D+ + +I+L C G +A + + + + C P+ V Y T ++ K+
Sbjct: 176 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKE 235
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G + A LF+ M ++G PD+VT N ++ ALC + + +A LR+M N+ LPN TY
Sbjct: 236 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 295
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
N+LI + + EM + S LP+ +T + L+ SL K +E V + M
Sbjct: 296 NNLIYGYSSTGQWKEAVRVFKEMRRH--SILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 353
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G +YN++L Y C + ++ M G+ PD ++ V+I + G L
Sbjct: 354 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 413
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
+ A+ F+EMR G+ P+ T
Sbjct: 414 DKAMIIFNEMRDHGVKPDVVT 434
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 159/393 (40%), Gaps = 50/393 (12%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N ++D + + +F EM PDLV TY +++ A +++
Sbjct: 219 SPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLV---TYNSVVHALCKARAMDK 275
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILN 265
A + L + + NL+ E F E ++ D+ T+++++
Sbjct: 276 AEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMG 335
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G + EA+ + + PD +Y +N KG L LF M G P
Sbjct: 336 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 395
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D T N +I A + +A+ + EM++ G P+V TY ++I LC+I +M+ E
Sbjct: 396 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 455
Query: 386 DEMEQKNGSCLPNEITFNYLLKS-------LKKPEEVPWVL-----------ERMERNGC 427
++M + + P++ +N L++ LK E + ++ + N C
Sbjct: 456 NQMIDQGVA--PDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 513
Query: 428 KMS--------------------TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
K+ YN+++ Y +K ++ M G+ P+
Sbjct: 514 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 573
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
Y +++G GR+++ LS F EM +G+ P
Sbjct: 574 GYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPS 606
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 14/265 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
F++I++ L + R ++ +FD PD V Y +L++ Y +E+A+ VFD
Sbjct: 505 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV---VYNMLMDGYCLVGKMEKALRVFD 561
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVL 270
G ++ + L+ C+ ++ + F E + G T+ +II++G
Sbjct: 562 AMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR-EMLQRGIKPSTILYSIIIDGLFEA 620
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G AK + ++ +S D TY + L K A+ LF+ + K +++T
Sbjct: 621 GRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 680
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +ID + +R+ EA ++ + +P+V TY+ +I +L K +E + M+
Sbjct: 681 NTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ- 739
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEV 415
N C PN N++++ L K E+
Sbjct: 740 -NAGCEPNSRLLNHVVRELLKKNEI 763
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 10/248 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + V+N ++D + + ++VFD M P++V YG L+N Y ++E
Sbjct: 535 PDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG---YGTLVNGYCKIGRIDEG 591
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNG 266
+ +F + G + ++ L + V F E ++ DI T NI+L G
Sbjct: 592 LSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRG 651
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
EA +K++ + + +T T ++ + + ++ A LF ++ P
Sbjct: 652 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPS 711
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT + +I L + + EA ++ M+N GC PN N +++ L K + YL
Sbjct: 712 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLS 771
Query: 387 EMEQKNGS 394
+++++N S
Sbjct: 772 KIDERNFS 779
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 108/258 (41%), Gaps = 17/258 (6%)
Query: 107 GEIEKALNQCELTLTDDLIVNVI------NRY----RFDWEAAYTFFKWVSREGDYSPGS 156
G++EKAL + ++ + NV+ N Y R D + F+ + + G P +
Sbjct: 551 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID--EGLSLFREMLQRG-IKPST 607
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
+++ I+D L A R V F EM + ++ TY I+L +EAI +F
Sbjct: 608 ILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 667
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGN 272
+ ++ ++ + + + VE A+ F S ++ + T +I++ G
Sbjct: 668 LRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGL 727
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
V EA+ + + + CEP+S V L KK ++ A + E+ + +T
Sbjct: 728 VEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAML 787
Query: 333 IIDALCFKKRIPEALEVL 350
++D K E + L
Sbjct: 788 LVDLFSSKGTCREQIRFL 805
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 185/439 (42%), Gaps = 70/439 (15%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
LT L+ + R R D +AA F+ P +L +L RARRF + +
Sbjct: 68 LTPALLQAALRRVRLDPDAALHLFRLAPSR----PSLVSHAQLLHILARARRFHDARALL 123
Query: 180 DEMPD----------------LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
+P + ++ +LL +A A + A+ VFD + G L
Sbjct: 124 SSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSL 183
Query: 224 SAFQNLLLWL-----------------------------------CRYKHVEVAETFFES 248
+ LL L CR V A F E
Sbjct: 184 RSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVE- 242
Query: 249 EKNEFGYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
E G ++ + + +++ +C +G +A+R + + + P+ VTY V K G
Sbjct: 243 EMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDG 302
Query: 307 KLGTALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
++ A R+ + M E G D V +I+ C + R+ +A V EM++ G N+ Y
Sbjct: 303 RMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVY 362
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK------SLKKPEEVPWVL 419
N++I LCK+ RME V + L EME P++ ++N L+ S++K E +
Sbjct: 363 NTMINGLCKLGRMEEVQKVLQEMEDVGMR--PDKYSYNTLIDGYCREGSMRKAFE---MC 417
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
M RNG +T TYN +LK + + D W M K+G+ P++ S + ++ GL+
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477
Query: 480 GRLEDALSYFHEMRLKGMV 498
G+ E AL+ + E +G+
Sbjct: 478 GKTEQALNLWKETLARGLA 496
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 153/367 (41%), Gaps = 38/367 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
E A K + GD + +++ + R + +V +EM D VN Y
Sbjct: 305 EEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNT 364
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNE 252
++N +EE V ++ G D ++ L+ CR + A E +N
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
T N +L G+C L + +A R W ++K P+ ++ +T ++ L K GK AL
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L++ +G +V+T N +I+ LC R+ EA E+L MK C P+ TY +L
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD 432
CK+ ++ T +++ME + P+ FN +
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFA--PSVEMFNSFI-------------------------- 576
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
T + I K W KV EM +G+ P+ +Y +I G +G L +A + + EM
Sbjct: 577 TGHFIAK---QW---HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEM 630
Query: 493 RLKGMVP 499
GM P
Sbjct: 631 VNNGMNP 637
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 6/202 (2%)
Query: 229 LLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
++ LC+ + A++ FES +N+ F D T + +++G G++ EA ++ +
Sbjct: 706 IIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAG 765
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
P+ +TY + + L K GKL A+ LF + KG P+ +T N +ID C + + EA
Sbjct: 766 LTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAF 825
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
++ ++M G P V TY+ LI LC ME + LD+M + N PN IT+ L+
Sbjct: 826 KLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVD--PNYITYCTLIH 883
Query: 408 SLKKP---EEVPWVLERMERNG 426
K EE+ + + M G
Sbjct: 884 GYIKSGNMEEISKLYDEMHIRG 905
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 102/207 (49%), Gaps = 5/207 (2%)
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N+I+ G C G + +AK ++ + + PD+ TY++ ++ G + A L M
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS 763
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G P+++T N +I LC ++ A+ + +++++G PN TYN+LI CK +
Sbjct: 764 AGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTE 823
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVI 437
++ +M ++ P IT++ L+ L EE +L++M N + TY +
Sbjct: 824 AFKLKQKMVEE--GIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTL 881
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGP 464
+ Y+ +++ ++EM +G+ P
Sbjct: 882 IHGYIKSGNMEEISKLYDEMHIRGLLP 908
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 162/380 (42%), Gaps = 33/380 (8%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
++P +FN+ + A+++ ++ + EM P+LV TYG L+ + +
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLV---TYGALIAGWCKEGNLH 621
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILN 265
EA ++ G + + F L C YK +V E +K +NI +
Sbjct: 622 EACNLYFEMVNNGM--NPNVFICSALMSCFYKEGKVDEANLVLQK--------LVNIDMI 671
Query: 266 GWCVLGNVYEAK--RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
C + + K I +V + + L K G++ A LF+++ K
Sbjct: 672 PGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRF 731
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD T + +I I EA + M + G PN+ TYNSLI LCK ++
Sbjct: 732 LPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVN 791
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
++++ K S PN IT+N L+ K E + ++M G + + TY++++
Sbjct: 792 LFNKLQSKGIS--PNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYG 849
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++ ++M + + P+ +Y +IHG G +E+ + EM ++G++P
Sbjct: 850 LCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 909
Query: 501 PRTG-------ILVNDMNIK 513
G ++VN+ N K
Sbjct: 910 NWIGNWKRSDPVVVNNWNRK 929
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 170/437 (38%), Gaps = 76/437 (17%)
Query: 154 PGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++D G R+ E+ ++ TY LL + + H +++A+ +
Sbjct: 392 PDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRL 451
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCV 269
+ + G + + LL L + E A + E+ ++ T N ++NG C
Sbjct: 452 WFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCK 511
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM----------- 318
+G + EA+ + + +C PDS+TY T + K G+LGTA L M
Sbjct: 512 IGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEM 571
Query: 319 -------------WEK-----------GRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
W K G P++VT +I C + + EA + EM
Sbjct: 572 FNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV 631
Query: 355 NRGCLPNVTTYNSLIKHL------------------------CKIKRMET-----VYEYL 385
N G PNV ++L+ C I +E V + +
Sbjct: 632 NNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTI 691
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ + + + N I F L KS + + + E + TY+ ++
Sbjct: 692 ADGNPHSANVMWNVIIFG-LCKS-GRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASG 749
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
D+ + M G+ P+ +Y +I+GL G+L A++ F++++ KG+ P GI
Sbjct: 750 SIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISP---NGI 806
Query: 506 LVNDMNIKLKERGEQGK 522
N + + E ++GK
Sbjct: 807 TYNTL---IDEYCKEGK 820
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 133/301 (44%), Gaps = 6/301 (1%)
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMN 261
++E+A +FD G + A+ +L+ CR K+V E E +K T
Sbjct: 362 VMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYG 421
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++ G C G++ A K++I S C P+ V Y T + + + G A+R+ + M E+
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G PD+ N +I L KR+ EA L EM G PN TY + I + +
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVIL 438
+Y+ EM + LPN++ L+ K E E M G TY V++
Sbjct: 542 DKYVKEMRE--CGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D D + EM KG+ PD SY V+I+G G ++ A S F EM +G+
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 499 P 499
P
Sbjct: 660 P 660
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 161/367 (43%), Gaps = 22/367 (5%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
+E +P +N+++ L +A+R E EM + N TYG ++ Y A
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNI 262
A +E G L + L+ C+ + V A + + S ++ G D KT +
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILG-DAKTYTV 597
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++NG V +A+ ++++ PD +Y +N +K G + A +F M E+G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P+V+ N ++ C I +A E+L EM +G PN TY ++I CK + +
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERN--GCKMSTDTYNVILKL 440
DEM+ K +P+ + L+ + +V + N GC ST +N +
Sbjct: 718 RLFDEMKLK--GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL--- 772
Query: 441 YVNW-------DCEDKVRHTWEEMEKKGMG-PDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+NW + + +V + + G P+ +Y +MI L +G LE A FH+M
Sbjct: 773 -INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 493 RLKGMVP 499
+ ++P
Sbjct: 832 QNANLMP 838
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
DI N ++ G + EA+ F +++++ +P++ TY F++ + + +A +
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ M E G P+ V C +I+ C K+++ EA R M ++G L + TY L+ L K
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTD 432
+++ E EM K + P+ ++ L+ K ++ + + M G +
Sbjct: 606 DKVDDAEEIFREMRGKGIA--PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
YN++L + +K + +EM KG+ P+ +Y +I G G L +A F EM
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 493 RLKGMVPE 500
+LKG+VP+
Sbjct: 724 KLKGLVPD 731
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 158/364 (43%), Gaps = 14/364 (3%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
RE P + +++ + + +E + M D L + KTY +L+N V
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNII 263
++A +F + G D+ ++ L+ + +++ A + F+ E ++ N++
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L G+C G + +AK ++ P++VTY T ++ K G L A RLF M KG
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD ++D C + A+ + K +GC + +N+LI + K + E E
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTE 787
Query: 384 YLDEMEQKNGS----CLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNV 436
L+ + +GS PN++T+N ++ L K E + +M+ + TY
Sbjct: 788 VLNRL--MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+L Y ++ ++E G+ PD Y+V+I+ +G AL +M K
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Query: 497 MVPE 500
V +
Sbjct: 906 AVDD 909
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 164/392 (41%), Gaps = 21/392 (5%)
Query: 122 DDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE 181
+ LI+ + R D EA + V E P + + A + A F + E
Sbjct: 491 NSLIIGLSKAKRMD-EARSFLVEMV--ENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 182 MPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
M + L N+ L+N Y V EA + + G L D + L+ L +
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 239 VEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
V+ AE F E D+ + +++NG+ LGN+ +A + ++++ P+ + Y
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+ + G++ A L M KG P+ VT IID C + EA + EMK +G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEE 414
+P+ Y +L+ C++ +E K G C + FN L+ K E
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGT--NKKG-CASSTAPFNALINWVFKFGKTEL 784
Query: 415 VPWVLERM-----ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
VL R+ +R G K + TYN+++ + + + +M+ + P +Y
Sbjct: 785 KTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 470 TVMIHGLYDK-GRLEDALSYFHEMRLKGMVPE 500
T +++G YDK GR + F E G+ P+
Sbjct: 844 TSLLNG-YDKMGRRAEMFPVFDEAIAAGIEPD 874
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 6/278 (2%)
Query: 226 FQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII 284
+ L+ LC+ K +E A++ E + D T +++++G N AK +++
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 285 KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP 344
Y + ++K+G + A LF M G P +I+ C +K +
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
+ E+L EMK R + + TY +++K +C ++ Y + EM C PN + +
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS--GCRPNVVIYTT 457
Query: 405 LLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L+K+ + + VL+ M+ G YN ++ D+ R EM + G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ P+ +Y I G + A Y EMR G++P
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 145/351 (41%), Gaps = 58/351 (16%)
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
++F EM PD+ +YG+L+N ++ +++A +FD E G ++ + LL
Sbjct: 613 EIFREMRGKGIAPDVF---SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 231 LWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
CR +E A E E + T I++G+C G++ EA R + ++
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 290 PDSVTYATFVN----------ALT-----KKG----------------KLG-TAL----- 312
PDS Y T V+ A+T KKG K G T L
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789
Query: 313 -RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
RL +++ KP+ VT N +ID LC + + A E+ +M+N +P V TY SL+
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER------- 424
K+ R ++ D E P+ I ++ ++ + K L +++
Sbjct: 850 YDKMGRRAEMFPVFD--EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907
Query: 425 -NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+GCK+S T +L + + E M + PD + +I+
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 151/374 (40%), Gaps = 64/374 (17%)
Query: 191 YGILLNRYAAAHMVEEAIGVF-------------------DRRKEFGELD---------- 221
+GIL + Y A +EEA+ VF D + LD
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213
Query: 222 ------DLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEF---------GYDIK------- 258
D+ + L++ CR +V++ + F++EK EF +K
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK-EFRTATLNVDGALKLKESMICKG 272
Query: 259 ------TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
T +++++G C + + +AK ++ D+ TY+ ++ L K A
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L M G +C I + + + +A + M G +P Y SLI+
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKM 429
C+ K + YE L EM+++N P T+ ++K + ++ +++ M +GC+
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ Y ++K ++ +EM+++G+ PD Y +I GL R+++A S+
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 490 HEMRLKGMVPEPRT 503
EM G+ P T
Sbjct: 511 VEMVENGLKPNAFT 524
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 118/308 (38%), Gaps = 47/308 (15%)
Query: 223 LSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
L +F L L LC + E A + E +I W V W
Sbjct: 97 LDSFSFLALDLCNFGSFEKALSVVE-------------RMIERNWPV-------AEVWSS 136
Query: 283 IIKSKCE-----PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
I++ E D V + + KG + A+ +F + P + C ++DAL
Sbjct: 137 IVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDAL 196
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK------ 391
R+ +V + M R + +V TY+ LI C+ ++ + L + E++
Sbjct: 197 LRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL 256
Query: 392 --NGS-----------CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN 435
+G+ +P + T++ L+ L K+ E+ +L M+ G + TY+
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+++ + D + EM G+ Y I + +G +E A + F M
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 496 GMVPEPRT 503
G++P+ +
Sbjct: 377 GLIPQAQA 384
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 185/439 (42%), Gaps = 70/439 (15%)
Query: 120 LTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF 179
LT L+ + R R D +AA F+ P +L +L RARRF + +
Sbjct: 68 LTPALLQAALRRVRLDPDAALHLFRLAPSR----PSLVSHAQLLHILARARRFHDARALL 123
Query: 180 DEMPD----------------LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
+P + ++ +LL +A A + A+ VFD + G L
Sbjct: 124 SSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSL 183
Query: 224 SAFQNLLLWL-----------------------------------CRYKHVEVAETFFES 248
+ LL L CR V A F E
Sbjct: 184 RSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVE- 242
Query: 249 EKNEFGYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
E G ++ + + +++ +C +G +A+R + + + P+ VTY V K G
Sbjct: 243 EMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDG 302
Query: 307 KLGTALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
++ A R+ + M E G D V +I+ C + R+ +A V EM++ G N+ Y
Sbjct: 303 RMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVY 362
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK------SLKKPEEVPWVL 419
N++I LCK+ RME V + L EME P++ ++N L+ S++K E +
Sbjct: 363 NTMINGLCKLGRMEEVQKVLQEMEDVGMR--PDKYSYNTLIDGYCREGSMRKAFE---MC 417
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
M RNG +T TYN +LK + + D W M K+G+ P++ S + ++ GL+
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477
Query: 480 GRLEDALSYFHEMRLKGMV 498
G+ E AL+ + E +G+
Sbjct: 478 GKTEQALNLWKETLARGLA 496
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 153/367 (41%), Gaps = 38/367 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
E A K + GD + +++ + R + +V +EM D VN Y
Sbjct: 305 EEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNT 364
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNE 252
++N +EE V ++ G D ++ L+ CR + A E +N
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
T N +L G+C L + +A R W ++K P+ ++ +T ++ L K GK AL
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L++ +G +V+T N +I+ LC R+ EA E+L MK C P+ TY +L
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD 432
CK+ ++ T +++ME + P+ FN +
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFA--PSVEMFNSFI-------------------------- 576
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
T + I K W KV EM +G+ P+ +Y +I G +G L +A + + EM
Sbjct: 577 TGHFIAK---QW---HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEM 630
Query: 493 RLKGMVP 499
GM P
Sbjct: 631 VNNGMNP 637
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/467 (20%), Positives = 179/467 (38%), Gaps = 94/467 (20%)
Query: 107 GEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVL 166
G+ E+ALN + TL L NVI FN +++ L
Sbjct: 478 GKTEQALNLWKETLARGLAKNVI----------------------------TFNTVINGL 509
Query: 167 GRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
+ R E ++ D M +L + TY L + Y + A + ++ + G +
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569
Query: 224 SAFQNLLL--WLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
F + + ++ + H +V + E ++ T ++ GWC GN++EA +
Sbjct: 570 EMFNSFITGHFIAKQWH-KVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYF 628
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV-------------- 327
+++ + P+ + ++ K+GK+ A + Q + P
Sbjct: 629 EMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVV 688
Query: 328 ------------VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
V N II LC RI +A + ++N+ LP+ TY+SLI
Sbjct: 689 DTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAAS 748
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTD 432
++ + D M + PN IT+N L+ L K ++ + +++ G +
Sbjct: 749 GSIDEAFSLRDVM--LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGI 806
Query: 433 TYNVILKLYVNWDCEDKVRHTW-------------------EEMEKKGMGPDQRSYTVMI 473
TYN ++ Y E K + ++M + + P+ +Y +I
Sbjct: 807 TYNTLIDEYCK---EGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLI 863
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPEPRTG-------ILVNDMNIK 513
HG G +E+ + EM ++G++P G ++VN+ N K
Sbjct: 864 HGYIKSGNMEEISKLYDEMHIRGLLPTNWIGNWKRSDPVVVNNWNRK 910
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 6/253 (2%)
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+F + + +++L G + A + + K C P + +N L + G G A
Sbjct: 143 DFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMA 202
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++ M G PD T + A C R+ +A+E + EM+ G N+ Y++++
Sbjct: 203 AMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDC 262
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCK 428
C + E L+ +++K S PN +T+ L+K K EE V++ M+ G
Sbjct: 263 YCGMGWTEDARRILESLQRKGLS--PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320
Query: 429 MSTD-TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ + Y +++ Y D EM G+ + Y MI+GL GR+E+
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380
Query: 488 YFHEMRLKGMVPE 500
EM GM P+
Sbjct: 381 VLQEMEDVGMRPD 393
>gi|147832566|emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
Length = 457
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 160/319 (50%), Gaps = 9/319 (2%)
Query: 182 MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+PD+V TY LL+ Y+ ++ A V R KE G D+ + +L+ + +
Sbjct: 39 LPDVV---TYNTLLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSR 95
Query: 242 AETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ FE + D+ + N +++ + LG EA R ++DII + P S T+ +N
Sbjct: 96 SLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMIN 155
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L G G AL L++ + +G P++VT N +I+ LC +++ A +LRE+ G +P
Sbjct: 156 GLCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNVP 215
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPW 417
+ TY +++K + ++ E +E EM+ K + + ++ ++ +L K EE
Sbjct: 216 DAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYA--FDAFSYCAVIAALTKTGRLEEAND 273
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
++E+M R+ + +YN ++ LY + +E+E+ G+ D+ ++T++I GL
Sbjct: 274 IMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLC 333
Query: 478 DKGRLEDALSYFHEMRLKG 496
G +E AL + M G
Sbjct: 334 KAGNVEGALRHLKNMTKMG 352
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 13/249 (5%)
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
+ K +NI + C +G + +A+ D I+ PD VTY T ++A ++ + A +
Sbjct: 5 FSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSV 64
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
M E G PDV+T N +I A + + +L++ EM G P+V +YNSL+ K
Sbjct: 65 IHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFK 124
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMST 431
+ + + ++ N LP+ TFN ++ L + L ++R G
Sbjct: 125 LGKPDEANRVFQDIILTN--LLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPEL 182
Query: 432 DTYNVILKLYVNWDCEDK----VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
TYN++ +N C+ + R E+ + G PD +YT ++ + + E
Sbjct: 183 VTYNIL----INGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFE 238
Query: 488 YFHEMRLKG 496
F EM+ KG
Sbjct: 239 IFSEMKSKG 247
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 116/246 (47%), Gaps = 15/246 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A + ++++ R+G + P +N +++ L ++R+ ++ E+ PD + TY
Sbjct: 166 ALSLYRYLQRQG-FVPELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAI---TYT 221
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKN 251
++ + E+ +F K G D ++ ++ L + +E A E ++
Sbjct: 222 TVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARS 281
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ DI + N ++N +C G + + +I + E D T+ ++ L K G + A
Sbjct: 282 DIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGA 341
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
LR + M + G +V NC+ID LC ++ A+++ M+ + + TY+S++ +
Sbjct: 342 LRHLKNMTKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFASME----VKDSFTYSSMVHN 397
Query: 372 LCKIKR 377
LCK +R
Sbjct: 398 LCKARR 403
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 10/246 (4%)
Query: 154 PGSNVFNAILDVL------GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P S+ FN +++ L G A +Q +P+LV TY IL+N + + A
Sbjct: 145 PSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELV---TYNILINGLCKSRKLNAA 201
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNG 266
+ E G + D + ++ R + E E F E + + +D + ++
Sbjct: 202 RRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAA 261
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
G + EA + + +S + D V+Y T +N + GKL +L + E G + D
Sbjct: 262 LTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECD 321
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
T +ID LC + AL L+ M G + N +I LCK+ +++ +
Sbjct: 322 EYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFA 381
Query: 387 EMEQKN 392
ME K+
Sbjct: 382 SMEVKD 387
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N I +LC ++ +A V+ + G LP+V TYN+L+ + ++ Y + M++
Sbjct: 11 NICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKE 70
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCE 447
S P+ IT+N L+ + K + L E M R G + +YN ++ +
Sbjct: 71 AGIS--PDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKP 128
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GIL 506
D+ ++++ + P ++ +MI+GL + G ALS + ++ +G VPE T IL
Sbjct: 129 DEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNIL 188
Query: 507 VNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
+N + K R + I L LG GN
Sbjct: 189 INGL---CKSRKLNAARRI-LRELGESGN 213
>gi|224100125|ref|XP_002334407.1| predicted protein [Populus trichocarpa]
gi|222872045|gb|EEF09176.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 192/412 (46%), Gaps = 27/412 (6%)
Query: 111 KALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRAR 170
++L+ + L++ L++ ++ R D FFKW S Y + ++ + L R+
Sbjct: 20 RSLDPDSIPLSESLVLQILRRNSLDSSKKMEFFKWCSVRHIYKHSVSTYSQMFSTLCRSG 79
Query: 171 RFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
E+ + + M + +V +T+ +LL+ + + + A+ + D +E G + +
Sbjct: 80 YLEEVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGKFDSALDILDHMEELGSNPNPHMYD 139
Query: 228 NLLLWLCRYKHVEVA--------ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
++++ L + V +A E +E+N G + ++ N V E K
Sbjct: 140 SIIVALAKKNQVGLALSIMFKLLEASDGNEENAVGVSLPG-SVACNALLVALRNGEMKVE 198
Query: 280 WKDII-----KSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK-----PDVVT 329
+K + K E ++ Y ++A G L T+LRLF+ M EK PD+ T
Sbjct: 199 FKTVFAKLRGKVGFELNTWGYNICIHAFGCWGDLTTSLRLFKEMKEKSLASGSLDPDLCT 258
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I LC ++ +A+ V E+K G P+ TY LI+ CK +ME + EM
Sbjct: 259 YNSLIHVLCLAGKVKDAVIVYEELKVSGHEPDAFTYRILIQGCCKSYQMEDSTKIFSEM- 317
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
Q NG LP+ + +N LL + +K E + E+M ++G + S TYN+++
Sbjct: 318 QYNGF-LPDTVVYNSLLDGMFKARKVMEACQLFEKMVQDGVRASCWTYNILIDGLCKNGR 376
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ + + ++KKG D +Y++++ L KG LEDAL EM +G V
Sbjct: 377 AEAGYNLFCGLKKKGQFVDAVTYSIVVLLLCRKGHLEDALHLVEEMEERGFV 428
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 7/232 (3%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR-YKHVEV 241
PDL TY L++ A V++A+ V++ K G D ++ L+ C+ Y+ +
Sbjct: 254 PDLC---TYNSLIHVLCLAGKVKDAVIVYEELKVSGHEPDAFTYRILIQGCCKSYQMEDS 310
Query: 242 AETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ F E + N F D N +L+G V EA + ++ +++ TY ++
Sbjct: 311 TKIFSEMQYNGFLPDTVVYNSLLDGMFKARKVMEACQLFEKMVQDGVRASCWTYNILIDG 370
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
L K G+ LF + +KG+ D VT + ++ LC K + +AL ++ EM+ RG + +
Sbjct: 371 LCKNGRAEAGYNLFCGLKKKGQFVDAVTYSIVVLLLCRKGHLEDALHLVEEMEERGFVVD 430
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK-SLKKP 412
+ T SL+ K R + + + N LPN + + ++ SLK P
Sbjct: 431 LITITSLLIAFHKQGRWDCTERLMKHIRDVN--LLPNVLKWRADMEASLKNP 480
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 17/227 (7%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY+ + L + G L L +M G T ++DA + AL++L M
Sbjct: 67 TYSQMFSTLCRSGYLEEVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGKFDSALDILDHM 126
Query: 354 KNRGCLPNVTTYNSLIKHLCK-------IKRMETVYEYLDEMEQKN-GSCLPNEITFNYL 405
+ G PN Y+S+I L K + M + E D E+ G LP + N L
Sbjct: 127 EELGSNPNPHMYDSIIVALAKKNQVGLALSIMFKLLEASDGNEENAVGVSLPGSVACNAL 186
Query: 406 LKSLKKPE---EVPWVLERME-RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
L +L+ E E V ++ + G +++T YN+ + + W ++EM++K
Sbjct: 187 LVALRNGEMKVEFKTVFAKLRGKVGFELNTWGYNICIHAFGCWGDLTTSLRLFKEMKEKS 246
Query: 462 MG-----PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ PD +Y +IH L G+++DA+ + E+++ G P+ T
Sbjct: 247 LASGSLDPDLCTYNSLIHVLCLAGKVKDAVIVYEELKVSGHEPDAFT 293
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 180/398 (45%), Gaps = 15/398 (3%)
Query: 113 LNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRF 172
LN C T ++ ++ F E+A + ++ +G +SP ++V ++ A +F
Sbjct: 131 LNLCHSFRTYSFLLRSLSEMGFH-ESAKAVYDCMNIDG-HSPDASVLGFLVSSATDAGKF 188
Query: 173 VELIQVFDEMP-DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
D + LV Y LLN+ + V+EA+ F + D +F L+
Sbjct: 189 NIARTWVDGVEFSLV---VYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIR 245
Query: 232 WLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDII-KSKC 288
LCR V+ A F +E FG D+ T N ++NG+C + V K+++ K+
Sbjct: 246 GLCRIGKVDKAFELF-NEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDL 304
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
PD VTY + ++ K GK+ A LF M G KP+ T N +I+ + A
Sbjct: 305 SPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAEN 364
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ EM GC P++ T+ SLI C+ ++E + E+ +N S PNE TF L +
Sbjct: 365 MYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLS--PNEYTFAILTNA 422
Query: 409 LKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L K E L ++ YN ++ + D+ EME+K PD
Sbjct: 423 LCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPD 482
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +YT++I G KGRL +A+S F+ M G P+ T
Sbjct: 483 KITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSIT 520
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 9/241 (3%)
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+ R W D + E V Y +N L + ++ A+ F+ D + N +
Sbjct: 188 FNIARTWVDGV----EFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNIL 243
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I LC ++ +A E+ EM+ GC P+V TYN+LI C++ ++ ++ L E+ KN
Sbjct: 244 IRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKN- 302
Query: 394 SCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
P+ +T+ ++ L K E+ + M +G K + T+N+++ +
Sbjct: 303 DLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSA 362
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVND 509
+ +EEM G PD ++T +I G G++E +L +HE+ + + P T IL N
Sbjct: 363 ENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNA 422
Query: 510 M 510
+
Sbjct: 423 L 423
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 125/341 (36%), Gaps = 39/341 (11%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
+ K + + D SP + +I+ + + + +F+ M N T+ IL+
Sbjct: 291 GHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILI 350
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFG 254
N + + A +++ G D+ F +L+ CR VE + + + E
Sbjct: 351 NGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLS 410
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
+ T I+ N C ++EA+ F +D+ Y ++ K G + A +
Sbjct: 411 PNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVI 470
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
M EK KPD +T +I C K R+ EA+ + M GC P+ T SLI L K
Sbjct: 471 LAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLK 530
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK------PEEVPWV---------- 418
Y + + FN LKSLK+ ++P
Sbjct: 531 AGMPNEAYRIMQIASED----------FNLGLKSLKRNVPLRTNTDIPVAFMSTVDGLTN 580
Query: 419 ----LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
L M C YN++L Y K H WE
Sbjct: 581 HFPGLASMPLATCNEGQSLYNILLDKYC-----IKAAHPWE 616
>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
Length = 514
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 174/335 (51%), Gaps = 12/335 (3%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V + L+N + ++ +++A+ V + ++ G D+ L+ LC+ + V A
Sbjct: 156 PDIVTASS---LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 212
Query: 243 ETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ K+ ++ T + ++ G C G + +A+R ++ K P+ +T++ ++A
Sbjct: 213 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 272
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K+GKL +++ M + P+V T + +I LC R+ EA+++L M ++GC PN
Sbjct: 273 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 332
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---V 418
V TY++L K R++ + LD+M Q+ + N ++ N L+K + ++ V
Sbjct: 333 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAA--NTVSCNTLIKGYFQAGKIDLALGV 390
Query: 419 LERMERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
M NG + +YN++L L+ N + E K +E M+K D +YT+MIHG+
Sbjct: 391 FGYMTSNGLIPNIRSYNIVLAGLFANGEVE-KALSRFEHMQKTRNDLDIITYTIMIHGMC 449
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMN 511
+++A F++++ K + P+ + I++ ++N
Sbjct: 450 KACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELN 484
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 139/290 (47%), Gaps = 17/290 (5%)
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+E E D+ T NI++N +C A + ++K EPD VT ++ VN
Sbjct: 114 AEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNS 173
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A+ + M + G K DVV +ID LC + + ALEVL+ MK+RG PNV TY+S
Sbjct: 174 IKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 233
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC 427
LI LCK R+ L EM+ K + PN ITF+ L+ + K ++ V + + +
Sbjct: 234 LITGLCKSGRLADAERRLHEMDSKKIN--PNVITFSALIDAYAKRGKLSKV-DSVYKMMI 290
Query: 428 KMSTD----TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+MS D TY+ ++ + D+ + M KG P+ +Y+ + +G + R++
Sbjct: 291 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 350
Query: 484 DALSYFHEMRLKGMVPEPRTGILVNDM--NIKLKERGEQGKKVIKLTSLG 531
D + +M P+ G+ N + N +K + GK + L G
Sbjct: 351 DGIKLLDDM--------PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 392
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 36/242 (14%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
++ T + ++ G C+ V EA + +I C P+ VTY+T N K ++ ++L
Sbjct: 297 NVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLL 356
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M ++G + V+CN +I +I AL V M + G +PN+ +YN ++ L
Sbjct: 357 DDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFAN 416
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYN 435
+E + M++ + IT+ ++ + K C M + Y+
Sbjct: 417 GEVEKALSRFEHMQKTRNDL--DIITYTIMIHGMCK--------------AC-MVKEAYD 459
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG-RLE-DALSYFHEMR 493
+ KL + K + PD ++YT+MI L G R E DAL+ F++
Sbjct: 460 LFYKL-----------------KFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKH 502
Query: 494 LK 495
++
Sbjct: 503 VR 504
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 165/367 (44%), Gaps = 49/367 (13%)
Query: 168 RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
+A R +E+++ F + PD+ Y L+N + + +++A V DR + D +
Sbjct: 142 KAVRVMEILEKFGQ-PDVF---AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 197
Query: 228 NLLLWLCRYKHVEVA------------------------ETFFESEKNE----------- 252
++ LC +++A T E +E
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 253 -FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
D+ T N I+ G C G V A +++ CEPD ++Y + AL +GK
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+L M+ + P+VVT + +I LC +I EA+ +L+ MK +G P+ +Y+ LI
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCK 428
C+ R++ E+L+ M + CLP+ + +N +L +L K + LE ++ GC
Sbjct: 378 FCREGRLDVAIEFLETM--ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 429 MSTDTYNVILKLYVNWDCEDKVR--HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
++ +YN + W DK+R H EM G+ PD+ +Y MI L +G +++A
Sbjct: 436 PNSSSYNTMFSAL--WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 487 SYFHEMR 493
+MR
Sbjct: 494 ELLVDMR 500
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 163/367 (44%), Gaps = 17/367 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R D+SP + +N ++ L + ++V +++ P ++ TY IL+
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI---TYTILIEATMLE 241
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTM 260
V+EA+ + D G D+ + ++ +C+ V+ A E E D+ +
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
NI+L G E ++ + KC+P+ VTY+ + L + GK+ A+ L + M E
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KG PD + + +I A C + R+ A+E L M + GCLP++ YN+++ LCK + +
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSL----KKPEEVPWVLERMERNGCKMSTDTYNV 436
E ++ + C PN ++N + +L K + +LE M NG TYN
Sbjct: 422 ALEIFGKLGEV--GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS-NGIDPDEITYNS 478
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ D+ +M P +Y +++ G R+EDA++ M G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 497 MVPEPRT 503
P T
Sbjct: 539 CRPNETT 545
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 132/248 (53%), Gaps = 5/248 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ N ++NG+C + + +A R + PD+VTY + +L +GKL AL++
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ +P V+T +I+A + + EAL+++ EM +RG P++ TYN++I+ +CK
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
++ +E + +E K C P+ I++N LL++L K EE ++ +M C +
Sbjct: 277 GMVDRAFEMVRNLELK--GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY++++ ++ + + M++KG+ PD SY +I +GRL+ A+ + M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 493 RLKGMVPE 500
G +P+
Sbjct: 395 ISDGCLPD 402
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 126/259 (48%), Gaps = 22/259 (8%)
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
GY D+ ++ G+ L N+ +A R +I++ +PD Y +N K ++ A
Sbjct: 119 GYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDA 177
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
R+ M K PD VT N +I +LC + ++ AL+VL ++ + C P V TY LI+
Sbjct: 178 TRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEA 237
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCK 428
++ + +DEM + P+ T+N +++ + K V E +E GC+
Sbjct: 238 TMLEGGVDEALKLMDEMLSRGLK--PDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCE 295
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-------KGMGPDQRSYTVMIHGLYDKGR 481
+YN++L+ +N + WEE EK + P+ +Y+++I L G+
Sbjct: 296 PDVISYNILLRALLN-------QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348
Query: 482 LEDALSYFHEMRLKGMVPE 500
+E+A++ M+ KG+ P+
Sbjct: 349 IEEAMNLLKLMKEKGLTPD 367
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 12/222 (5%)
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
+ G +L L + M KG PDV+ C +I + IP+A+ V+ ++ G P+V
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLE 420
YN+LI CK+ R++ LD M K+ S P+ +T+N ++ SL K + VL
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFS--PDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
++ + C+ + TY ++++ + D+ +EM +G+ PD +Y +I G+ +G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 481 RLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
++ A + LKG P+ V NI L+ QGK
Sbjct: 278 MVDRAFEMVRNLELKGCEPD------VISYNILLRALLNQGK 313
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 36/266 (13%)
Query: 175 LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
+ ++F E D N TY IL+ +EEA+ + KE G D ++ L+ C
Sbjct: 321 MTKMFSEKCD-PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 235 RYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
R ++VA F E+ ++ DI N +L C G +A + + + C P+S
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
+Y T +AL G AL + M G PD +T N +I LC + + EA E+L +M
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
++ P+V TYN ++ CK R+E
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAIN------------------------------ 529
Query: 414 EVPWVLERMERNGCKMSTDTYNVILK 439
VLE M NGC+ + TY V+++
Sbjct: 530 ----VLESMVGNGCRPNETTYTVLIE 551
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 6/242 (2%)
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ G+ M I + C GN E+ + +++ PD + +
Sbjct: 79 QQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLR 138
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ A+R+ + + EK +PDV N +I+ C RI +A VL M+++ P+ TYN
Sbjct: 139 NIPKAVRVME-ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 197
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERME 423
+I LC +++ + L+++ N C P IT+ L+++ +E +++ M
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDN--CQPTVITYTILIEATMLEGGVDEALKLMDEML 255
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G K TYN I++ D+ +E KG PD SY +++ L ++G+ E
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
Query: 484 DA 485
+
Sbjct: 316 EG 317
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 31/229 (13%)
Query: 107 GEIEKALNQCELT----LTDD------LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
G+IE+A+N +L LT D LI R D A F + + +G P
Sbjct: 347 GKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD--VAIEFLETMISDGCL-PDI 403
Query: 157 NVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILL-------NRYAAAHMVEE 206
+N +L L G+A + +E+ E+ N +Y + ++ A HM+ E
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
+ G D + +++ LCR V+ A E + EF + T NI+L
Sbjct: 464 MM-------SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
G+C + +A + ++ + C P+ TY + + G A+ L
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 173/364 (47%), Gaps = 19/364 (5%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMP------DLVNEKTYGILLNRYAAAHMVE 205
+ P FN L++L R R +++F MP D+V +Y I+++ A +
Sbjct: 115 FVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVV---SYTIIIDALCNAKRFD 171
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
EA V+ R + G D A L++ LC V++A E K + N ++
Sbjct: 172 EAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALI 231
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G+C +G V +A + + ++ C PD VTY +N ++G + A+RL + M G +
Sbjct: 232 DGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVE 291
Query: 325 PDVVTCNCIIDALCFKKRIPEA-LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD+ + N ++ C + A L ++ M+ +G + +V +YN++I CK +R YE
Sbjct: 292 PDLYSYNELLKGFCKANMVDRAHLMMVERMQTKG-MCDVVSYNTVITAFCKARRTRKGYE 350
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+EM K P+ +TFN L+ + + E V++++ KM + V+
Sbjct: 351 LFEEMCGK--GIRPDMVTFNILIDAFLR-EGSTHVVKKLLDEMTKMRVLPDCIFYTAVVD 407
Query: 444 WDCE----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
C+ D + +M + G+ PD SY +++G R+ DA+ F EM+ KG+ P
Sbjct: 408 HLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYP 467
Query: 500 EPRT 503
+ T
Sbjct: 468 DEVT 471
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 144/316 (45%), Gaps = 19/316 (6%)
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG 254
+++ A ++ +AI +FD+ E + + L R+ + +A ++ G
Sbjct: 17 ISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRG 76
Query: 255 YDIK--TMNIILNGWCVLGN---VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ + T + ++ C N + D+ PD + T++N L ++ +L
Sbjct: 77 FSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLE 136
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
TAL LF +M KGR PDVV+ IIDALC KR EA +V R + ++G P+ +L+
Sbjct: 137 TALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALV 196
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER---MERNG 426
LC R++ YE + + + G N + +N L+ + V ++ M R G
Sbjct: 197 VGLCSGGRVDLAYELVVGVIK--GGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTG 254
Query: 427 CKMSTDTYNVILKLYVNWDCE----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
C TYN++L N+ CE D+ E ME+ G+ PD SY ++ G +
Sbjct: 255 CVPDLVTYNILL----NYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMV 310
Query: 483 EDA-LSYFHEMRLKGM 497
+ A L M+ KGM
Sbjct: 311 DRAHLMMVERMQTKGM 326
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM- 182
L+V + + R D AY V + G S V+NA++D R R + +++ M
Sbjct: 195 LVVGLCSGGRVDL--AYELVVGVIK-GGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMS 251
Query: 183 -----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
PDLV TY ILLN MV+EA+ + + + G DL ++ LL C+
Sbjct: 252 RTGCVPDLV---TYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKAN 308
Query: 238 HVE-----------------------VAETFFESEKNEFGY-------------DIKTMN 261
V+ V F ++ + GY D+ T N
Sbjct: 309 MVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFN 368
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I+++ + G+ + K+ ++ K + PD + Y V+ L K GK+ A +F+ M E
Sbjct: 369 ILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVEN 428
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G PDV++ N +++ C R+ +A+ + EM+++G P+ TY ++ L + K++
Sbjct: 429 GVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLA 488
Query: 382 YEYLDEMEQKN 392
D+M ++
Sbjct: 489 CRVWDQMMERG 499
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 192/449 (42%), Gaps = 77/449 (17%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TY 191
D++ ++ + ++ P +N +++ L + RF E +++++ M EK TY
Sbjct: 236 DYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTY 295
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
L++ A ++ A+ V+ E + D +L CR ++ + +
Sbjct: 296 SSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGK 355
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
E + + NI++ G G V EA W+ + K C P+S TY ++ L K G+L A
Sbjct: 356 ENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKA 415
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL--------------------- 350
L++F+ + K D + ++D LC + R+ EA+ ++
Sbjct: 416 LKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLING 475
Query: 351 --------------REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK----- 391
REM+ +GC P + +YN+LIK LCK +R Y ++ EM +K
Sbjct: 476 FVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPD 535
Query: 392 --------NGSCL--------------------PNEITFNYLLK---SLKKPEEVPWVLE 420
+G C P+ +N L+ S+ K E+ +
Sbjct: 536 MITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYS 595
Query: 421 RMERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
M+R+ C + T N +++ LY D E K W+ + K G+ PD SY + I GL
Sbjct: 596 HMKRSTCVPNLVTRNTLMEGLYKVRDYE-KASEIWDCILKDGLHPDIISYNITIKGLCSC 654
Query: 480 GRLEDALSYFHEMRLKGMVPEPRT-GILV 507
R+ DA+ + ++ +G++P T ILV
Sbjct: 655 SRISDAIEFLNDALNRGILPTAVTWNILV 683
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 170/376 (45%), Gaps = 18/376 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
+W+ A +F ++ D SP +N ++ + + ++ + I + D M PD+
Sbjct: 131 EWDRAESFSRYF-ESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVF-- 187
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
+YG L+N + A+ VFD G + D++ + L+ ++ + + +E
Sbjct: 188 -SYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWER 246
Query: 249 EKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ ++ T NI++NG C G E+ W+ + K++ E D TY++ ++ L + G
Sbjct: 247 LVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAG 306
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ A+R+++ + E D VT N +++ C +I E+ E+ M C V +YN
Sbjct: 307 NIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSYN 365
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERME 423
LIK L + ++E + + +K C P T+ L+ L K + L + E
Sbjct: 366 ILIKGLFENGKVEEAISIWELLCKK--GCRPESTTYGVLIHGLCKNGRLNKALKIFKEAE 423
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
K+ Y+ ++ D+ +M+K+G D +I+G +LE
Sbjct: 424 DGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLE 483
Query: 484 DALSYFHEMRLKGMVP 499
DA+++F EM KG P
Sbjct: 484 DAINFFREMECKGCSP 499
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 137/311 (44%), Gaps = 42/311 (13%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGI 193
E A + ++ + ++G P S + ++ L + R + +++F E P ++ Y
Sbjct: 378 EEAISIWELLCKKG-CRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSS 436
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNE 252
+++ ++EAI + ++ + G D L+ R +E A FF E E
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG 496
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
I + N ++ G C EA F K++++ + +PD +T + ++ L ++ K+ AL
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMAL 556
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL---- 368
L+Q +KG KPD+ N ++ LC ++ +AL++ MK C+PN+ T N+L
Sbjct: 557 NLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGL 616
Query: 369 -------------------------------IKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
IK LC R+ E+L+ + N LP
Sbjct: 617 YKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLN--DALNRGILP 674
Query: 398 NEITFNYLLKS 408
+T+N L+++
Sbjct: 675 TAVTWNILVRA 685
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 131/305 (42%), Gaps = 41/305 (13%)
Query: 246 FESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
F++ ++ FG +++ N +LN + L A+ F + P+ TY +
Sbjct: 103 FQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISC 162
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
KK ++ A+ L MW + KPDV + +I+ + + AL+V EM RG + +VT
Sbjct: 163 KKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVT 222
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLE 420
YN LI K + E + + K+ S PN +T+N ++ L K +E + E
Sbjct: 223 CYNMLIDGFFKHGDYDKGKEIWERL-VKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWE 281
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ-------------- 466
RM +N + TY+ ++ D ++E+ + + D
Sbjct: 282 RMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAG 341
Query: 467 --------------------RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GI 505
SY ++I GL++ G++E+A+S + + KG PE T G+
Sbjct: 342 KIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGV 401
Query: 506 LVNDM 510
L++ +
Sbjct: 402 LIHGL 406
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 154/350 (44%), Gaps = 9/350 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
P +N ++D L +ARR I+ F+ MP+ + TY LL V +A +F
Sbjct: 68 PDVFTYNVVIDTLCKARRISRAIEFFETMPE-PDVVTYNTLLGGLCKNGRVAQACSLFGS 126
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGN 272
+ G + L+ C+ E A + + + + I+NG C
Sbjct: 127 MEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRK 186
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
V +A + ++++ + C+PD VTY T ++ L K +L A L M E G +PD +T
Sbjct: 187 VDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTA 246
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+I+ LC RI EA + + M +GC P++ T+ L+ LC ++++ + +
Sbjct: 247 LIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVV----RNY 302
Query: 393 GSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
+C I + + + L + + +L++M R G + TY K +W +
Sbjct: 303 PACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMR 362
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ M ++G+ PD +Y V++ G RL+ A M G+ P
Sbjct: 363 AYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPP 412
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 165/383 (43%), Gaps = 50/383 (13%)
Query: 160 NAILDVLGRARRFVELIQVF------DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
NA+LD+L RARR +++ VF D P N +Y L+ +++A
Sbjct: 4 NALLDLLERARRSEQIVVVFRRIFSQDCKP---NALSYCYLVKALCRTGKIDKACSTIAE 60
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
+ D+ + ++ LC+ + + A FFE+ D+ T N +L G C G V
Sbjct: 61 MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEP---DVVTYNTLLGGLCKNGRV 117
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+A + + + P VTY T ++ K + TA L Q M + P V + I
Sbjct: 118 AQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSI 177
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I+ LC +++ +A ++ EMK GC P+ TYN+LI LC +R+ + L M + NG
Sbjct: 178 INGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVE-NG 236
Query: 394 SCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI------------- 437
P++ITF L++ L + +E + + M + GC T+ V+
Sbjct: 237 F-QPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPA 295
Query: 438 LKLYVNWD-CE-------------------DKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
L + N+ C D+ ++M ++G+ P+ +YT GL
Sbjct: 296 LSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLG 355
Query: 478 DKGRLEDALSYFHEMRLKGMVPE 500
D A F M +G+ P+
Sbjct: 356 DWKEGMRAYREFRRMLEQGIEPD 378
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 18/263 (6%)
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ C G + +A ++ + K PD TY ++ L K ++ A+ F+ M E
Sbjct: 41 LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE-- 98
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PDVVT N ++ LC R+ +A + M+ G P+ TY +LI CK+ + ET Y
Sbjct: 99 --PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 156
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK 439
L M + C P ++ ++ L +K ++ + E M+ GCK TYN +
Sbjct: 157 GLLQLMASRK--CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTL-- 212
Query: 440 LYVNWDCEDKVRHTWEE----MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++ C + H ++ M + G PD+ ++T +I GL R+++A F M +
Sbjct: 213 --IHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQ 270
Query: 496 GMVPEPRT-GILVNDMNIKLKER 517
G P+ T +LV+ + I K R
Sbjct: 271 GCAPDLVTHTVLVSKLCILRKLR 293
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 130/314 (41%), Gaps = 46/314 (14%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
+E AY + ++ SP + +I++ L + R+ + Q+F+EM PD V
Sbjct: 152 FETAYGLLQLMASR-KCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV--- 207
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY L++ + EA + E G D F L+ LC ++ A F+
Sbjct: 208 TYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGM 267
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVY---------------------------------E 275
K D+ T ++++ C+L +
Sbjct: 268 AKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDR 327
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A R + + + P+ VTY F L + A R F+ M E+G +PD+V N ++D
Sbjct: 328 AARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVD 387
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
C R+ A +++R M G PN+ TYN+L+ H C+ ++E + E L M +
Sbjct: 388 GFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQ- 446
Query: 396 LPNEITFNYLLKSL 409
P+ T++ L+ L
Sbjct: 447 -PDVATWSTLVAGL 459
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+F+ ++ + KP+ ++ ++ ALC +I +A + EM +P+V TYN +I LC
Sbjct: 22 VFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLC 81
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMS 430
K +R+ E+ + M + P+ +T+N LL L K V + ME G S
Sbjct: 82 KARRISRAIEFFETMPE------PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPS 135
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
TY ++ ++ + + M + P SY +I+GL +++ A F
Sbjct: 136 DVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFE 195
Query: 491 EMRLKGMVPEPRT-GILVNDMNIK 513
EM+L G P+ T L++ + +K
Sbjct: 196 EMKLAGCKPDRVTYNTLIHGLCVK 219
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 108/248 (43%), Gaps = 18/248 (7%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E + P F A+++ L R E +F M PDLV T+ +L+++
Sbjct: 234 ENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLV---THTVLVSKLCILR 290
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMN 261
+ A+ V E L + + L R + + A + + ++ T
Sbjct: 291 KLRPALSVVRNYPACPEAVIL--YTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYT 348
Query: 262 IILNGWCVLGNVYEAKRFWKD---IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
G LG+ E R +++ +++ EPD V Y V+ K +L A ++ + M
Sbjct: 349 AFFKG---LGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYM 405
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
+ G P++VT N ++ C K ++ E+L M +RG P+V T+++L+ L + +
Sbjct: 406 DQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQA 465
Query: 379 ETVYEYLD 386
+ Y +L+
Sbjct: 466 DAAYSFLN 473
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 154/346 (44%), Gaps = 12/346 (3%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
E A+ ++ +G P +NAI++ L + R+ + EM ++ + TY
Sbjct: 18 EEAFEIMNSMADKG-LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 76
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
LL EA +F G + DL +F +L+ R +H++ A +F K +F
Sbjct: 77 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMK-KF 135
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G D ++++G+C GN+ EA + ++++ C D + Y T +N L K+ L A
Sbjct: 136 GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDA 195
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+LF M E+G PD T +I C + +AL + M R P++ YN+LI
Sbjct: 196 DKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDG 255
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCK 428
CK+ ME E D M + PN IT+ L+ S+ E + + M G K
Sbjct: 256 FCKVGEMEKASELWDGMISR--KIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIK 313
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+ T N ++K Y K M KG+ PD SY +I+
Sbjct: 314 PTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 136/314 (43%), Gaps = 6/314 (1%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFES 248
TY L+ Y ++EEA + + + G L + ++ LC+ ++ E
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
D T N +L C N EAK + ++++ PD V++++ + ++ L
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL F+ M + G PD V ++ C + EAL++ EM +GC+ +V YN++
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERN 425
+ LCK K + + DEM ++ LP+ TF L+ + + L M +
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGA--LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
K YN ++ + +K W+ M + + P+ +Y ++I+ G + +A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300
Query: 486 LSYFHEMRLKGMVP 499
+ M KG+ P
Sbjct: 301 FRLWDVMIEKGIKP 314
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 112/249 (44%), Gaps = 13/249 (5%)
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAM 318
T N ++ +C G + EA + +P TY +N L KKG+ A + M
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
G PD T N ++ C + EA E+ EM +G +P++ +++SL+ + + +
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYN 435
+ Y +M K +P+ + + L+ + E + + M GC + YN
Sbjct: 123 DQALVYFRDM--KKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 436 VILKLYVNWDCEDKV----RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
IL N C++K+ ++EM ++G PD ++T +IHG G + ALS F
Sbjct: 181 TIL----NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGT 236
Query: 492 MRLKGMVPE 500
M + + P+
Sbjct: 237 MTQRNIKPD 245
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+VT N +I A C + + EA E++ M ++G P++ TYN++I LCK R L
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 387 EMEQKNGSCLPNEITFNYLL-KSLKKP--EEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM N P+ T+N LL +S ++ E + M R G +++ ++ ++
Sbjct: 61 EM--LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSR 118
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D+ + +M+K G+ PD YTV++HG G + +AL EM +G V
Sbjct: 119 NRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCV 173
>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 457
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 159/319 (49%), Gaps = 10/319 (3%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD++ TY L++ Y ++ A + +R KE G D+ ++ +L R ++ +
Sbjct: 40 PDII---TYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKS 96
Query: 243 -ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII-KSKCEPDSVTYATFVN 300
+ F E ++ D+ + NI+++ + LG EA ++DI + + P +Y +N
Sbjct: 97 LDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMIN 156
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K G + AL LF+ + +G P+V+T N +I+ LC +R+ +A VL E + G P
Sbjct: 157 GLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEP 216
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPW 417
N TY +++K + R+E E L EM +K + + + ++ +L K EE
Sbjct: 217 NAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFT--FDGFAYCTVVAALVKTGRIEEADE 274
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
+ E+M NG +YN ++ L+ D+ +E+EK+GM DQ ++T++IHGL
Sbjct: 275 IAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLC 334
Query: 478 DKGRLEDALSYFHEMRLKG 496
G E A + M G
Sbjct: 335 KDGNFEGAEKHLDYMNTLG 353
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 173/379 (45%), Gaps = 25/379 (6%)
Query: 113 LNQCELTLTDDLIV--NVINRY-RF-DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
++ +L L D+I +I+ Y RF +AAY + +E +P +N++ R
Sbjct: 31 IDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRM-KEAGINPDVVSYNSLSSGAVR 89
Query: 169 ARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL-D 221
+ + +FDEM PD+ +Y IL++ Y EEA GVF E GE+
Sbjct: 90 KCLLQKSLDLFDEMLQSGIRPDV---WSYNILMHCYFRLGKPEEANGVFRDIFERGEIYP 146
Query: 222 DLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW 280
++++ ++ LC+ +V A F + + F ++ T N ++NG C + +A+R
Sbjct: 147 SMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVL 206
Query: 281 KDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFK 340
+ EP+++TY T + + G+L L + M KG D ++ AL
Sbjct: 207 NEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKT 266
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
RI EA E+ +M + G +P++ +YN++I C+ R + +DE+E++ C ++
Sbjct: 267 GRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKC--DQY 324
Query: 401 TFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
T ++ L K E L+ M G + +N IL DK ++ M
Sbjct: 325 THTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSM 384
Query: 458 EKKGMGPDQRSYTVMIHGL 476
E K D +YT ++H L
Sbjct: 385 EVK----DSFTYTSLLHNL 399
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 134/325 (41%), Gaps = 43/325 (13%)
Query: 224 SAFQNLLL-WLCRYKHVEVAET-FFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ F N+ + +C+ + AET + K DI T N +++G+C + A
Sbjct: 7 TKFMNITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILN 66
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV-------------- 327
+ ++ PD V+Y + + +K L +L LF M + G +PDV
Sbjct: 67 RMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLG 126
Query: 328 ----------------------VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
+ N +I+ LC + AL + R ++ RG +P V TY
Sbjct: 127 KPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTY 186
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
N++I LCK +R+ L+E PN IT+ ++K + E+ +L M
Sbjct: 187 NAMINGLCKARRLADARRVLNEFCDFGFE--PNAITYTTVMKCCFRCGRLEQGLEILSEM 244
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
R G Y ++ V ++ E+M G+ PD SY MI+ +GR
Sbjct: 245 RRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRF 304
Query: 483 EDALSYFHEMRLKGMVPEPRTGILV 507
++AL E+ +GM + T ++
Sbjct: 305 DEALRLVDEIEKQGMKCDQYTHTII 329
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 9/251 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILL 195
A F+ + R G + P +NA+++ L +ARR + +V +E D N TY ++
Sbjct: 167 ALMLFRNLRRRG-FVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVM 225
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFG 254
+E+ + + + G D A+ ++ L + +E A+ E N
Sbjct: 226 KCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLV 285
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ + N ++N +C G EA R +I K + D T+ ++ L K G A +
Sbjct: 286 PDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKH 345
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
M G ++V N I+D L I +A++V M+ + + TY SL+ +LC+
Sbjct: 346 LDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSME----VKDSFTYTSLLHNLCR 401
Query: 375 IKRMETVYEYL 385
K+ + L
Sbjct: 402 AKKFRIASKLL 412
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 147/308 (47%), Gaps = 8/308 (2%)
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGW 267
G+F R E G ++ + + LC+ +V+ A E + ++ T +++G
Sbjct: 237 GLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGL 296
Query: 268 CVLGNVYEAKRFWKDIIKSKC-EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +G A R + ++KS +P+ TY + K+GKL A L M E+G P+
Sbjct: 297 CKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPN 356
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
T +ID C A E++ +MK G LPN+ TYN++I CK +++ Y+ L
Sbjct: 357 TNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVL- 415
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVN 443
M G C P+++T+ L+ K + + L+ +M N C DTY I+ +Y
Sbjct: 416 RMATSQGLC-PDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQ 474
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ + +++ G+ P +++YT MI G G+ AL F M G +P+P T
Sbjct: 475 QRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPIT 534
Query: 504 -GILVNDM 510
G L++ +
Sbjct: 535 YGALISGL 542
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 169/391 (43%), Gaps = 27/391 (6%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM- 182
L++ RF+ A W REG +S S ++ R RF ++ +F M
Sbjct: 187 LVLGCCQEGRFEEADALLAAMW--REG-FSLDSATCTVVVRAFCRQGRFRDVPGLFGRMV 243
Query: 183 -----PDLVNEKTY--GILLNRYA--AAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
P++VN + G+ Y A H++EE +G G ++ +L+ L
Sbjct: 244 EMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGK-------GLKPNVYTHTSLIDGL 296
Query: 234 CRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
C+ E A F + + + ++ T +++ G+C G + A+ +++ P+
Sbjct: 297 CKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPN 356
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+ TY T ++ + G A L M +G P++ T N II C K +I +A +VLR
Sbjct: 357 TNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLR 416
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---S 408
++G P+ TY LI CK + + ++M + SC P+ T+ ++
Sbjct: 417 MATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAEN--SCHPDIDTYTTIIAMYCQ 474
Query: 409 LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
++ E+ + ++ G + TY ++ Y +E M + G PD +
Sbjct: 475 QRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPIT 534
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
Y +I GL + RLE+A + F M K MVP
Sbjct: 535 YGALISGLCKESRLEEARALFETMLDKHMVP 565
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 111/251 (44%), Gaps = 4/251 (1%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D ++ ++ G C G EA + + DS T V A ++G+ LF
Sbjct: 180 DARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLF 239
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M E G P+VV +D LC + + +A VL EM +G PNV T+ SLI LCKI
Sbjct: 240 GRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKI 299
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTD 432
E + ++ K+ S PN T+ ++ K ++ +L RM G +T+
Sbjct: 300 GWTERAFRLFLKL-VKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 358
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY ++ + D+ +M+ +G P+ +Y +I G KG+++ A
Sbjct: 359 TYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMA 418
Query: 493 RLKGMVPEPRT 503
+G+ P+ T
Sbjct: 419 TSQGLCPDKVT 429
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 131/299 (43%), Gaps = 16/299 (5%)
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTM 260
H A FD G D +F+ L+L C+ E A+ + E F D T
Sbjct: 163 HHFAHARQAFD---GMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATC 219
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+++ +C G + + +++ P+ V Y +V+ L K+G + A + + M
Sbjct: 220 TVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVG 279
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEV-LREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
KG KP+V T +ID LC A + L+ +K+ PNV TY +I CK ++
Sbjct: 280 KGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLA 339
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNV 436
L M ++ + PN T+ L+ + E +M+ G + TYN
Sbjct: 340 RAEMLLGRMVEQGLA--PNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNA 397
Query: 437 ILKLYVNWDCEDKVRHTWEEME---KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
I+ + + K++ ++ + +G+ PD+ +YT++I +G + AL F++M
Sbjct: 398 IIGGFCK---KGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQM 453
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 14/251 (5%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD+ ++ V ++G+ A L AMW +G D TC ++ A C + R + +
Sbjct: 179 PDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGL 238
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
M G PNV Y + + LCK ++ + L+EM K PN T L+ L
Sbjct: 239 FGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLK--PNVYTHTSLIDGL 296
Query: 410 KKPEEVPWV-------LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
K + W L+ ++ + K + TY V++ Y + M ++G+
Sbjct: 297 CK---IGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGL 353
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
P+ +YT +I G G + A ++M+L+G +P T + K K + +Q
Sbjct: 354 APNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCK-KGKIQQAY 412
Query: 523 KVIKL-TSLGL 532
KV+++ TS GL
Sbjct: 413 KVLRMATSQGL 423
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 107/248 (43%), Gaps = 4/248 (1%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVE 205
E +P +N + ++D R F ++ ++M L N TY ++ + ++
Sbjct: 350 EQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQ 409
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
+A V G D + L+ C+ H+ A + F + +N DI T I+
Sbjct: 410 QAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTII 469
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+C + ++++ + + P TY + + + GK +AL++F+ M + G
Sbjct: 470 AMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCL 529
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD +T +I LC + R+ EA + M ++ +P T +L C+ + +
Sbjct: 530 PDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSF 589
Query: 385 LDEMEQKN 392
LD ++++
Sbjct: 590 LDGLDKRQ 597
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 162/355 (45%), Gaps = 9/355 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
+P F +++D LG+ R + +++++M D N Y L+ + E+
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWC 268
++ DL + + + E FE K+ F D ++ +I+++G
Sbjct: 504 IYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLI 563
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G E + + + C D+ Y ++ K GK+ A +L + M KG +P VV
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +ID L R+ EA + E K++ NV Y+SLI K+ R++ Y L+E+
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWD 445
QK + PN T+N LL +L K EE+ L + M+ C + TY +++
Sbjct: 684 MQKGLT--PNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+K W+EM+K+GM P SYT MI GL G + +A + F + G VP+
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 207/460 (45%), Gaps = 31/460 (6%)
Query: 61 LGRIETAQLVHSLANSDEKSEFQ-RYPGD-EIAINVQNILKTCSVSTKGEIEKALNQCEL 118
R + + + SL+++ E E + G+ +I ++ N+L+T + E AL+
Sbjct: 4 FARTKFCKHLSSLSDNGENHEKPYTFEGNRQIVNDICNVLETGAWGPSAE--NALSALNF 61
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
+ ++ V+ R + D A +F+W R + +N++L V+ R R F L Q+
Sbjct: 62 KPQPEFVIGVLRRLK-DVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQI 120
Query: 179 FDEMPDLVNEKTYGILLN-------RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLL 231
EM + +G +N A+ + E V ++F SA+ L+
Sbjct: 121 LGEM----SVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIG 176
Query: 232 WLCRYKHVEVAETFFESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
H ++ T F+ + E GY+ + ++ G+ G V A ++ S +
Sbjct: 177 AFSAVNHSDMMLTLFQ-QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLD 235
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
D V Y +++ K GK+ A + F + G KPD VT +I LC R+ EA+E+
Sbjct: 236 ADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEM 295
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
++ +P YN++I + + Y L E ++ GS +P+ I +N +L L
Sbjct: 296 FEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL-ERQRAKGS-IPSVIAYNCILTCL 353
Query: 410 K---KPEEVPWVLERMERNGCKMSTDTYNVILKLYV---NWDCEDKVRHTWEEMEKKGMG 463
+ K +E V E M+++ + TYN+++ + DC ++R + M+K G+
Sbjct: 354 RKMGKVDEALRVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDCAFELR---DSMQKAGLF 409
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
P+ R+ +M+ L +L++A + F +M K P+ T
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEIT 449
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 178/414 (42%), Gaps = 52/414 (12%)
Query: 141 TFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGIL 194
T F+ + G Y P ++F ++ + R + + DEM D+V Y +
Sbjct: 189 TLFQQMQELG-YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV---LYNVC 244
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEF 253
++ + V+ A F + G D + +++ LC+ ++ A FE EKN
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
N ++ G+ G EA + P + Y + L K GK+ ALR
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALR 364
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+F+ M +K P++ T N +ID LC ++ A E+ M+ G PNV T N ++ LC
Sbjct: 365 VFEEM-KKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMS 430
K ++++ ++M+ K C P+EITF L+ L K V + E+M + C+ +
Sbjct: 424 KSQKLDEACAIFEQMDYK--VCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTN 481
Query: 431 TDTYNVILKLY----------------VNWDCE-------------------DKVRHTWE 455
+ Y ++K + VN +C +K R +E
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
E++ + PD RSY+++IHGL G + F+ M+ +G V + R +V D
Sbjct: 542 EIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 595
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 129/275 (46%), Gaps = 9/275 (3%)
Query: 240 EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
E E F+ ++ D + NI+++G+C G V +A + +++ EP VTY + +
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ L K +L A LF+ K + +VV + +ID RI EA +L E+ +G
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE----- 414
PNV T+NSL+ L K + + M K C PN++T+ L+ L K +
Sbjct: 690 PNVYTWNSLLDALVKAEEINEALVCFQSM--KELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
V W + M++ G K ST +Y ++ + ++ + G PD Y MI
Sbjct: 748 VFW--QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIE 805
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
GL + R DA S F E R +G+ +T +++ D
Sbjct: 806 GLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLD 840
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 160/355 (45%), Gaps = 23/355 (6%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGIL 194
D + T+ + + G+ G +F I ++RRFV PD ++Y IL
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEI-----KSRRFV---------PD---ARSYSIL 558
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-F 253
++ A E +F KE G + D A+ ++ C+ V A E K + F
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
+ T +++G + + EA +++ + E + V Y++ ++ K G++ A
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+ + + +KG P+V T N ++DAL + I EAL + MK C PN TY LI LC
Sbjct: 679 ILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMS 430
K+++ + + EM QK G P+ I++ ++ L K E + +R + NG
Sbjct: 739 KVRKFNKAFVFWQEM-QKQGM-KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
+ YN +++ N + +EE ++G+ ++ V++ L+ LE A
Sbjct: 797 SACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQA 851
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 165/369 (44%), Gaps = 9/369 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+ A+ FF + G P + +++ VL +A R E +++F+ + + Y
Sbjct: 255 DMAWKFFHEIEANG-LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
++ Y +A +EA + +R++ G + + A+ +L L + V+ A FE K +
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA 373
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
++ T NI+++ C G + A + K+ P+ T V+ L K KL A
Sbjct: 374 APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+F+ M K PD +T +ID L R+ +A ++ +M + C N Y SLIK+
Sbjct: 434 IFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMS 430
R E ++ +M +N C P+ N + + K PE+ + E ++
Sbjct: 494 NHGRKEDGHKIYKDMVNQN--CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPD 551
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
+Y++++ + ++ + M+++G D R+Y ++I G G++ A
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 491 EMRLKGMVP 499
EM+ KG P
Sbjct: 612 EMKTKGFEP 620
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 139/306 (45%), Gaps = 13/306 (4%)
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKT-MNIILNGWC 268
++RR E + ++ +LLL + R ++ + + E FG + T + ++L+ C
Sbjct: 88 YERRTELPHCPE--SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLS--C 143
Query: 269 VLGN-VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
V N + E +++ K K P Y T + A + L LFQ M E G +P V
Sbjct: 144 VKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+I + R+ AL +L EMK+ ++ YN I K+ +++ +++ E
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
+E NG P+E+T+ ++ L K +E + E +E+N T YN ++ Y +
Sbjct: 264 IEA-NG-LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSA 321
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTG 504
D+ E KG P +Y ++ L G++++AL F EM+ K P T
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTY 380
Query: 505 ILVNDM 510
++ DM
Sbjct: 381 NILIDM 386
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 181/398 (45%), Gaps = 41/398 (10%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVF--NAILDVLGRARRFVELI 176
L D+ V++R R D E FF WVSR G YS N F +++L +L R+R F E+
Sbjct: 57 VLASDVAHLVLDRIR-DVELGLKFFDWVSR-GQYSGPINGFAYSSLLKLLARSRVFSEME 114
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD-RRKEFGELDDLSAFQNL 229
V + M P + I++ Y+ + +VE+A+ ++ K + D+ A +L
Sbjct: 115 VVLENMRVEEMSP---TREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSL 171
Query: 230 LLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
L L + +E+A F I++ G C G + E ++ +D C
Sbjct: 172 LNMLVKLGRIEIARKF--------------TCIMVKGLCKEGKLEEGRKLIEDRWGQGCI 217
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P+ + Y T ++ KKG + A LF + KG P V T II+ C K +
Sbjct: 218 PNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRL 277
Query: 350 LREMKNRGCLPNVTTYNSLI----KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
L EM +RG NV YN++I KH +K +ET+ ++ C P+ +T+N L
Sbjct: 278 LMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIE------CGCKPDIVTYNTL 331
Query: 406 LKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ K E +LE+ G + +Y ++ Y D+ + EM ++G
Sbjct: 332 ISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGH 391
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
PD +Y ++HGL G ++ AL+ +M +G+ P+
Sbjct: 392 KPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPD 429
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 14/253 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKTYGILLNRYAAAHMVEEA 207
P +N ++ R + E Q+ ++ MP N+ +Y L++ Y + A
Sbjct: 323 PDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMP---NKFSYTPLIHAYCKQGGYDRA 379
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILN 265
E G DL + L+ L V+VA T E E+ F D NI+++
Sbjct: 380 SNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFP-DAGIYNILMS 438
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C + AK +++ PD+ YAT V+ + G L A +LF+ EKG P
Sbjct: 439 GLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNP 498
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+V N +I C + +A+ + MK R P+ TY+++I K ++ +
Sbjct: 499 GIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMF 558
Query: 386 DEMEQKNGSCLPN 398
EM + C PN
Sbjct: 559 REMVKMK--CKPN 569
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 4/181 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PDLV TYG L++ A V+ A+ + ++ E G D + L+ LC+ + A
Sbjct: 393 PDLV---TYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAA 449
Query: 243 ETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ E D +++G+ GN+ EA++ ++ I+ P V Y +
Sbjct: 450 KLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKG 509
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K G + A+ M ++ PD T + +ID + + A ++ REM C PN
Sbjct: 510 YCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPN 569
Query: 362 V 362
V
Sbjct: 570 V 570
>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 766
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 165/374 (44%), Gaps = 43/374 (11%)
Query: 159 FNAILDVLGR---ARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
FNA+L LGR R L+ DEM PD+V T GIL+N + V+EA+ VF+
Sbjct: 297 FNALLSCLGRNMNIGRMNALVLKMDEMKIRPDVV---TLGILINTLCKSRRVDEALQVFE 353
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGN 272
+ +C + + N D N +++G C +G
Sbjct: 354 Q-------------------MCGKR---------TDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 273 VYEAKRFWKDI-IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ EA+ + ++ +C P++VTY ++ + GKL TA + M E G KPDVVT N
Sbjct: 386 LKEAEELLVRMKMEERCVPNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTVN 445
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
I+ +C + A+ +M+ G NV TY +LI C + +E + D+M +
Sbjct: 446 TIVGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLE- 504
Query: 392 NGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
C P+ + L+ L ++ + V+E++ G + YN+++ L+ + + +
Sbjct: 505 -AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAE 563
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVN 508
KV +MEK+GM PD +Y +I E +MR + P T V
Sbjct: 564 KVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMREDELDPTVATYGAVI 623
Query: 509 DMNIKLKERGEQGK 522
+ + E GE K
Sbjct: 624 EAYCSVGELGEALK 637
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 175/387 (45%), Gaps = 15/387 (3%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGD----YSPGSNVFNAILDVLGRARRFVE 174
+T +++N + + R EA F + + D S FN ++D L + R E
Sbjct: 329 VVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Query: 175 ----LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
L+++ E + N TY L++ Y A +E A V R KE G D+ ++
Sbjct: 389 AEELLVRMKMEERCVPNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTVNTIV 448
Query: 231 LWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
+CR+ + +A FF + EK ++ T +++ C L N+ +A ++ ++++ C
Sbjct: 449 GGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCS 508
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD+ Y ++ L + + A+R+ + + E G D++ N +I C K + E+
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEM 568
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
L +M+ G P+ TYN+LI K K E+V +++M + P T+ ++++
Sbjct: 569 LTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMREDELD--PTVATYGAVIEAY 626
Query: 410 KKPEEVPWVLERMERNGCKM----STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
E+ L+ + G + +T YN+++ + + EEM+ K + P+
Sbjct: 627 CSVGELGEALKLFKDMGLRSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEM 492
+Y + L +K + E L EM
Sbjct: 687 VETYNALFKCLKEKNQAETLLKLMDEM 713
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 154/361 (42%), Gaps = 24/361 (6%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEM-------PDLVNEKTYGILLNRYAAAHMV--EE 206
S V N ++DVL R + +V DEM P N T I+L+ ++ E+
Sbjct: 185 SQVRNVVIDVLLRNGLVDDAFKVLDEMLQKESVFPP--NRITADIVLHEVWKGRLLTEEK 242
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
IG+ R G + + LC+ A + + KN+ + N +L+
Sbjct: 243 IIGLISRFSSHGVSPNSVWLTRFISSLCKNARTNAAWDILSDLMKNKAPLEAPPFNALLS 302
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR-- 323
N+ + + K PD VT +N L K ++ AL++F+ M K
Sbjct: 303 CLGRNMNIGRMNALVLKMDEMKIRPDVVTLGILINTLCKSRRVDEALQVFEQMCGKRTDD 362
Query: 324 ----KPDVVTCNCIIDALCFKKRIPEALEVLREMK-NRGCLPNVTTYNSLIKHLCKIKRM 378
K D + N +ID LC R+ EA E+L MK C+PN TYN LI C+ ++
Sbjct: 363 GNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKMEERCVPNTVTYNCLIDGYCRAGKL 422
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYN 435
ET E + M K P+ +T N ++ + + + + ME+ G K + TY
Sbjct: 423 ETAKEVVSRM--KEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYM 480
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++ + +K H +++M + G PD + Y +I GL R DA+ ++R
Sbjct: 481 TLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREG 540
Query: 496 G 496
G
Sbjct: 541 G 541
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 119/245 (48%), Gaps = 13/245 (5%)
Query: 179 FDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
FD+M PD K Y L++ +AI V ++ +E G DL A+ L+
Sbjct: 499 FDKMLEAGCSPD---AKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGL 555
Query: 233 LCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
C + E V E + EK D T N +++ + + +R + + + + +P
Sbjct: 556 FCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMREDELDPT 615
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVL 350
TY + A G+LG AL+LF+ M + + P+ V N +I+A +AL +
Sbjct: 616 VATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNILINAFSKLGNFGQALSLK 675
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
EMK + PNV TYN+L K L + + ET+ + +DEM ++ SC PN+IT L++ L
Sbjct: 676 EEMKMKMVRPNVETYNALFKCLKEKNQAETLLKLMDEMVEQ--SCEPNQITMEILMERLS 733
Query: 411 KPEEV 415
+E+
Sbjct: 734 GSDEL 738
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 5/229 (2%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVE 205
E SP + ++ A++ L + RR + I+V +++ + ++ Y +L+ + + E
Sbjct: 504 EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAE 563
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIIL 264
+ + ++ G D + L+ + ++K E E E ++E + T ++
Sbjct: 564 KVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMREDELDPTVATYGAVI 623
Query: 265 NGWCVLGNVYEAKRFWKDI-IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+C +G + EA + +KD+ ++SK P++V Y +NA +K G G AL L + M K
Sbjct: 624 EAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+P+V T N + L K + L+++ EM + C PN T L++ L
Sbjct: 684 RPNVETYNALFKCLKEKNQAETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 12/218 (5%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P+SV F+++L K + A + + + + N ++ L I +
Sbjct: 257 PNSVWLTRFISSLCKNARTNAAWDILSDLMKNKAPLEAPPFNALLSCLGRNMNIGRMNAL 316
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK---NGSCL-PNEITFNYL 405
+ +M P+V T LI LCK +R++ + ++M K +G+ + + I FN L
Sbjct: 317 VLKMDEMKIRPDVVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKADSIHFNTL 376
Query: 406 LKS------LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
+ LK+ EE+ ++ ER C +T TYN ++ Y + + M++
Sbjct: 377 IDGLCKVGRLKEAEELLVRMKMEER--CVPNTVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
G+ PD + ++ G+ L A+ +F +M +G+
Sbjct: 435 DGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDMEKEGV 472
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 171/369 (46%), Gaps = 15/369 (4%)
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRF------VELIQVFDEMPDLVNEKTYGILLNRY 198
WVSRE SP S +IL+ L R RRF +L+ +PD+ Y +L
Sbjct: 153 WVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDV---HIYFVLFQCC 209
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDI 257
+ + + D G ++ + +L LCR +E AE FE +K+ ++
Sbjct: 210 FKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNL 269
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T + +++G+C GNV +A +K+I+ ++ P+ V + T V+ K +L TA LF
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M + G P++ NC+I C + EA+ +L EM++ P+V TY LI LC +
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTY 434
+ +M KN P+ T+N L+ K + L+ M +G + + T+
Sbjct: 390 VAEANRLFQKM--KNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITF 447
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+ ++ Y N + EM KG+ PD +YT +I + + +++AL + +M
Sbjct: 448 STLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE 507
Query: 495 KGMVPEPRT 503
G+ P T
Sbjct: 508 AGIHPNDHT 516
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 178/405 (43%), Gaps = 24/405 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVEL---IQVFDEMPDLVNEKT 190
E A F+ + + G P ++A++D G R+ L I V + +P++V
Sbjct: 251 EEAEKMFELMKKHG-VLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV---V 306
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESE 249
+G L++ + A + A +F +FG +L + L+ C+ + +E E E
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
D+ T I++NG C+ V EA R ++ + + P S TY + ++ K+ +
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
AL L M G +P+++T + +ID C + I A+ + EM +G +P+V TY +LI
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Query: 370 -KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
H + E + Y D +E PN+ TF L+ K + ++ + N +
Sbjct: 487 DAHFKEANMKEALRLYSDMLE---AGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Query: 429 MSTDTYNVILKLYVNWDCED----KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
S + V + C++ + + +M G+ PD SY M+ G + R+ D
Sbjct: 544 RSCWNH-VGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITD 602
Query: 485 ALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTS 529
+ +M G++P +LVN + + + K LT+
Sbjct: 603 TMMLQCDMIKTGILP----NLLVNQLLARFYQANGYVKSACFLTN 643
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 175/417 (41%), Gaps = 30/417 (7%)
Query: 111 KALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRAR 170
++L+ +D L +++ R R A +FF ++ Y P S ++ +L +L AR
Sbjct: 56 QSLHNLTFKYSDHLTDSLLRRLRLHPSACLSFFHLATQNSHYRPHSLSYSILLHILTHAR 115
Query: 171 RFVELIQVFDEMPDLV---NEKTYGI--------------------LLNRYAAAHMVEEA 207
F E V ++ DL N + Y + L+ +A M + A
Sbjct: 116 LFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVYKEFGFCSGVFDMLMKAFAERGMTKHA 175
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNG 266
+ VFD G + L + LL L + VA F+ D+ +I++N
Sbjct: 176 LYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNA 235
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +G V A + ++K EP+ VTY VN +G R+ + M E+G +
Sbjct: 236 HCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRN 295
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCL-PNVTTYNSLIKHLCKIKRMETVYEYL 385
VVTC ++ C K ++ EA ++LRE++ L + Y L+ C++ RME
Sbjct: 296 VVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIR 355
Query: 386 DEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
DEM + N + N L+K L + E V M K +YN +L Y
Sbjct: 356 DEMLRVGLKV--NMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYC 413
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
K EEM G+ P +Y +I GL D G +DAL +H M +G+ P
Sbjct: 414 REGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTP 470
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 169/435 (38%), Gaps = 66/435 (15%)
Query: 71 HSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVIN 130
H+L DE S R PG L++CS ++K + + + D ++ I
Sbjct: 174 HALYVFDEMSRIGRVPG----------LRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGI- 222
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT 190
D S V NA V GR +E+++ + N T
Sbjct: 223 ------------------VPDVYMCSIVVNAHCQV-GRVDVAMEVLEKMVKEGLEPNVVT 263
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESE 249
Y L+N Y E V E G ++ L+ C+ ++ AE E E
Sbjct: 264 YNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVE 323
Query: 250 KNEF-GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
++E D + ++++G+C +G + +A R ++++ + + V T + K G++
Sbjct: 324 EDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQV 383
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A R+F M + KPD + N ++D C + ++ +A + EM G P V TYN++
Sbjct: 384 CEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTV 443
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
IK L + + M ++ + PNEI+ C
Sbjct: 444 IKGLVDVGSYDDALHLWHLMVERGVT--PNEISC------------------------CT 477
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
M L + D+ W+E+ +G ++ MI GL G+L +A +
Sbjct: 478 M--------LDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAV 529
Query: 489 FHEMRLKGMVPEPRT 503
F M+ G+ P+ T
Sbjct: 530 FDRMKELGLSPDEIT 544
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 120/277 (43%), Gaps = 40/277 (14%)
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N +++G C +G + EA + + + PD +TY T + K G + A ++ M
Sbjct: 511 NTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMER 570
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+ + N +ID L +++ + ++L EM+ RG PNV TY +LI C ++++
Sbjct: 571 QAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDK 630
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERM-------ERNGCK-- 428
+ EM ++ + PN + + ++ SL + + E +L++M N C
Sbjct: 631 AFHLYFEMIERGFT--PNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDK 688
Query: 429 ----------------------MSTDTYNVILKLYVNWDCE----DKVRHTWEEMEKKGM 462
++ + N++ + ++ C+ D+ R + +G
Sbjct: 689 LVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGF 748
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
PD +Y +IH G +++A EM KG++P
Sbjct: 749 LPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIP 785
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 137/303 (45%), Gaps = 8/303 (2%)
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
EA VFDR KE G D ++ L C+ +V+ A + E+ I+ N ++
Sbjct: 525 EAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLI 584
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G + + + ++ P+ VTY T ++ + KL A L+ M E+G
Sbjct: 585 DGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFT 644
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP-NVTTYNSLIKHLCKIKRMETVYE 383
P+VV C+ I+ +L RI EA +L +M + L + + L+K+ ++ + + +
Sbjct: 645 PNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEA-QKIAD 703
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
LD+ + N L N I +N + L K +E VL + G TY ++
Sbjct: 704 SLDKSDICNS--LSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHA 761
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D+ +EM +KG+ P+ Y +I+GL G ++ A F+++ KG+VP
Sbjct: 762 CSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPN 821
Query: 501 PRT 503
T
Sbjct: 822 AVT 824
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+G+ A WK+I+ +V + T ++ L K GKL A +F M E G PD +T
Sbjct: 485 MGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEIT 544
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ D C + EA ++ M+ + ++ YNSLI L KI+++ V + L EM+
Sbjct: 545 YRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQ 604
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
+ S PN +T+ L+ W E+ KL DK
Sbjct: 605 TRGLS--PNVVTYGTLISG--------WCDEQ-----------------KL-------DK 630
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
H + EM ++G P+ + ++ LY R+ +A +M
Sbjct: 631 AFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKM 673
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%)
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
NI ++G C G + EA+ ++ PD+ TY T ++A + G + A +L M E
Sbjct: 721 NIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLE 780
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KG P++ N +I+ LC I A + ++ +G +PN TYN LI C+I ++
Sbjct: 781 KGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDK 840
Query: 381 VYEYLDEMEQKNGS 394
++M ++ S
Sbjct: 841 ASRLREKMTEEGIS 854
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 124/274 (45%), Gaps = 18/274 (6%)
Query: 143 FKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLN 196
K V S ++N+++D L + R+ ++ + EM P++V TYG L++
Sbjct: 564 IKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVV---TYGTLIS 620
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD 256
+ +++A ++ E G ++ ++ L R + A + +D
Sbjct: 621 GWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILD---KMLDFD 677
Query: 257 IKTMNIILNGWCVLGNV-YEAKRFWKDIIKSK-CEP--DSVTYATFVNALTKKGKLGTAL 312
I ++ + V ++ EA++ + KS C +++ Y ++ L K GKL A
Sbjct: 678 ILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEAR 737
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ + +G PD T +I A + EA ++ EM +G +PN+T YN+LI L
Sbjct: 738 SVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGL 797
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
CK+ ++ ++ QK +PN +T+N L+
Sbjct: 798 CKLGNIDRAQRLFYKLYQK--GLVPNAVTYNILI 829
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 6/225 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLN 196
+A + +F+ + R ++P V + I+ L R R E + D+M D + +
Sbjct: 630 KAFHLYFEMIER--GFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSD 687
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLS---AFQNLLLWLCRYKHVEVAETFFESEKNE- 252
+ + EA + D + + LS + + LC+ ++ A + +
Sbjct: 688 KLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRG 747
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
F D T +++ V GNV EA + ++++ P+ Y +N L K G + A
Sbjct: 748 FLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQ 807
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
RLF +++KG P+ VT N +I C + +A + +M G
Sbjct: 808 RLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEG 852
>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
Length = 439
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 174/335 (51%), Gaps = 12/335 (3%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V + L+N + ++ +++A+ V + ++ G D+ L+ LC+ + V A
Sbjct: 81 PDIVTASS---LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 137
Query: 243 ETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ K+ ++ T + ++ G C G + +A+R ++ K P+ +T++ ++A
Sbjct: 138 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 197
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K+GKL +++ M + P+V T + +I LC R+ EA+++L M ++GC PN
Sbjct: 198 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 257
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---V 418
V TY++L K R++ + LD+M Q+ + N ++ N L+K + ++ V
Sbjct: 258 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAA--NTVSCNTLIKGYFQAGKIDLALGV 315
Query: 419 LERMERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
M NG + +YN++L L+ N + E K +E M+K D +YT+MIHG+
Sbjct: 316 FGYMTSNGLIPNIRSYNIVLAGLFANGEVE-KALSRFEHMQKTRNDLDIITYTIMIHGMC 374
Query: 478 DKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMN 511
+++A F++++ K + P+ + I++ ++N
Sbjct: 375 KACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELN 409
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 139/290 (47%), Gaps = 17/290 (5%)
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+E E D+ T NI++N +C A + ++K EPD VT ++ VN
Sbjct: 39 AEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNS 98
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A+ + M + G K DVV +ID LC + + ALEVL+ MK+RG PNV TY+S
Sbjct: 99 IKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 158
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGC 427
LI LCK R+ L EM+ K + PN ITF+ L+ + K ++ V + + +
Sbjct: 159 LITGLCKSGRLADAERRLHEMDSKKIN--PNVITFSALIDAYAKRGKLSKV-DSVYKMMI 215
Query: 428 KMSTD----TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+MS D TY+ ++ + D+ + M KG P+ +Y+ + +G + R++
Sbjct: 216 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 275
Query: 484 DALSYFHEMRLKGMVPEPRTGILVNDM--NIKLKERGEQGKKVIKLTSLG 531
D + +M P+ G+ N + N +K + GK + L G
Sbjct: 276 DGIKLLDDM--------PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 317
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 36/242 (14%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
++ T + ++ G C+ V EA + +I C P+ VTY+T N K ++ ++L
Sbjct: 222 NVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLL 281
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M ++G + V+CN +I +I AL V M + G +PN+ +YN ++ L
Sbjct: 282 DDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFAN 341
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYN 435
+E + M++ + IT+ ++ + K C M + Y+
Sbjct: 342 GEVEKALSRFEHMQKTRNDL--DIITYTIMIHGMCK--------------AC-MVKEAYD 384
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG-RLE-DALSYFHEMR 493
+ KL + K + PD ++YT+MI L G R E DAL+ F++
Sbjct: 385 LFYKL-----------------KFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKH 427
Query: 494 LK 495
++
Sbjct: 428 VR 429
>gi|242050034|ref|XP_002462761.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
gi|241926138|gb|EER99282.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
Length = 535
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 185/402 (46%), Gaps = 16/402 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A FF+ ++ +++ +++D+L + F + DEM + ++ + L+
Sbjct: 118 AAAFFRHIAASLPADSLPDLYASMIDLLAKHHHFSLARHLLDEMRERAVPISSRLIFALI 177
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGE-LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG 254
RY A M EA +F R +E+G + + +LL L + + A+ F+S + F
Sbjct: 178 RRYVRAEMPSEAADLFRRMEEYGSGAPEPATLASLLAALSKKRLASEAQALFDSCRTVFT 237
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ +++ WC G + EA+R + ++ +S P+ TY ++A+ + G++ A L
Sbjct: 238 PDVVLYTAVVHAWCRAGQLDEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQEL 297
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
M + G P+ T N I+ A R + L+V +M C P++ TYN LI+ C
Sbjct: 298 LCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMHQLRCEPDIITYNFLIETHCG 357
Query: 375 IKR--METVYEYLDEMEQKNGSCLPNEITFN---YLLKSLKKPEEVPWVLERMERNGCKM 429
+ ++ + LD+M K C+P+ TFN LL L + E+M CK
Sbjct: 358 KGQGNLDAALKVLDKMIAKK--CVPDCHTFNPMFRLLVVLGNIGAAHKLYEKMRELQCKP 415
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ TYN +LKL+ D V + M+ +G+ P+ +Y +I +G + A +
Sbjct: 416 NVVTYNCLLKLFNKEKSMDMVLRMKKNMDVEGIEPNMHTYAALIEAFCGRGNWKRAHATL 475
Query: 490 HEM-RLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSL 530
EM K P + V DM + L + Q KK +L L
Sbjct: 476 KEMIEEKSFKPSKQ----VRDMVLVLLRKAGQLKKHEELVEL 513
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 205/484 (42%), Gaps = 59/484 (12%)
Query: 88 DEIAI-NVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWV 146
DE+A +V ++LKT + ++ ++ + ++ VI+ R D + FF WV
Sbjct: 38 DEVAAHDVASLLKTPNWEKNSSLKSLVSH----MNPNVASQVISLQRSDNDICVRFFMWV 93
Query: 147 SR--------------------EGDYSPGSNVFNAILDVLGRA-RRFVELIQVFDEMPDL 185
+ G Y V A++ R + ++L+ FDE+ ++
Sbjct: 94 CKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREV 153
Query: 186 ----VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+N Y LL A + A + R + G + + ++ ++ LC+ + E
Sbjct: 154 FGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEA 213
Query: 242 AETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS-KCEPDSVTYATFV 299
AE F K F D +L G+C N+ +A + + + K C P+SV+Y+ +
Sbjct: 214 AEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILI 273
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ L + G+L A L M EKG +P T +I ALC + I +A + EM RGC
Sbjct: 274 HGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCK 333
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC--------LPNEITFNYLLKS-LK 410
PNV TY LI LC+ + +E+ NG C P+ IT+N L+ K
Sbjct: 334 PNVHTYTVLIDGLCRDGK----------IEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 411 KPEEVPW--VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
VP +L ME+ CK + T+N +++ K H + M G+ PD S
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLT 528
Y V+I GL +G + A M + P+ T + + K QGK +
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK------QGKADVASA 497
Query: 529 SLGL 532
LGL
Sbjct: 498 FLGL 501
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 181/426 (42%), Gaps = 49/426 (11%)
Query: 130 NRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARR-FVELIQVFDEMPDL--- 185
+ Y FD K + G Y V A++ R + ++L+ FDE+ ++
Sbjct: 97 SSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGF 156
Query: 186 -VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
+N Y LL A + A + R + G + + ++ ++ LC+ + E AE
Sbjct: 157 RLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEM 216
Query: 245 FFESEKNEFGYDIKT--------------------------------------MNIILNG 266
F S+ + G+ + + +I+++G
Sbjct: 217 FM-SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHG 275
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C +G + EA + + C+P + TY + AL +G + A LF M +G KP+
Sbjct: 276 LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPN 335
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
V T +ID LC +I EA V R+M P+V TYN+LI CK R+ +E L
Sbjct: 336 VHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLT 395
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
ME++ +C PN TFN L++ L KP + +L+RM NG +YNV++
Sbjct: 396 VMEKR--ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ M + PD ++T +I+ +G+ + A ++ M KG+ + T
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVT 513
Query: 504 GILVND 509
G + D
Sbjct: 514 GTTLID 519
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 176/433 (40%), Gaps = 75/433 (17%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A F +S+E +P S ++ ++ L R E + D+M + + +TY +L+
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE---------VAETFF 246
++++A +FD G ++ + L+ LCR +E V + F
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
Query: 247 ES---------------------------EKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
S EK +++T N ++ G C +G Y+A
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K ++ + PD V+Y ++ L ++G + TA +L +M +PD +T II+A C
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR-------MET------------ 380
+ + A L M +G + T +LI +CK+ + +ET
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 381 -------------VYEYLDEMEQKNG-SCLPNEITFNYLLKSLKKPEEVPW---VLERME 423
V E L + + N +P+ +T+ L+ L + ++ +LE M+
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
+GC + Y +I+ + ++ M+ G+ P+ +YTVM+ G + G+L+
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668
Query: 484 DALSYFHEMRLKG 496
AL M +G
Sbjct: 669 RALETVRAMVERG 681
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 150/393 (38%), Gaps = 61/393 (15%)
Query: 137 EAAYTFFKWVSREG---DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI 193
+ A F + R+G D G+ + + + V G+ R + +++ +M L + +
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKV-GKTRDALFILETLVKMRILTTPHSLNV 551
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
+L+ + V+E + + + + G + + + L+ L R
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS----------------- 594
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
G++ + R + + S C P+ Y +N L + G++ A +
Sbjct: 595 -----------------GDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK 637
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH-- 371
L AM + G P+ VT ++ ++ ALE +R M RG N Y+SL++
Sbjct: 638 LLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV 697
Query: 372 -------------LCKIKRMETVYEYLDEM---EQKNGSCLPNEITF--NYLLKSLKKPE 413
+ I ET E ++E+ ++ G C+ F L K + E
Sbjct: 698 LSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDE 757
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
V +ER ++I++ Y + K + K G P +S+ ++I
Sbjct: 758 SNDLVQNVLERG--VFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVI 815
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPEPRTGIL 506
GL +G E A E+ V E ++G+L
Sbjct: 816 QGLKKEGDAERARELVMELLTSNGVVE-KSGVL 847
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 176/368 (47%), Gaps = 19/368 (5%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDE------MPDLVNEKTYGILLNRYAAA 201
R D P F++++ + R+ + + F+ +PD V Y IL+ Y
Sbjct: 357 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV---IYTILIQGYCRK 413
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKT 259
M+ EA+ + + + G D+ + +L LC+ K + A+ F +E E G D T
Sbjct: 414 GMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF-NEMTERGLFPDSYT 472
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
+ I+++G C LGN+ A +K + + + + D VTY T ++ K G + TA ++ M
Sbjct: 473 LTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 532
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
K P ++ + +++ALC K + EA V EM ++ P V NS+IK C+
Sbjct: 533 SKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNAS 592
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTD--TY 434
+L++M + +P+ I++N L+ K E + ++++ME + D TY
Sbjct: 593 DGEIFLEKMISE--GFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTY 650
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N IL + + + +M ++G+ PD+ +YT +I+G + L +A + EM
Sbjct: 651 NSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQ 710
Query: 495 KGMVPEPR 502
+G P+ +
Sbjct: 711 RGFSPDDK 718
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 157/340 (46%), Gaps = 8/340 (2%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
+ + A +F V +E P + ++ ++ R E + + +EM ++ TY
Sbjct: 380 NLDKALMYFNSV-KEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTY 438
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
+L+ M+ EA +F+ E G D L+ C+ +++ A F+ K
Sbjct: 439 NTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKE 498
Query: 252 E-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ D+ T N +L+G+ +G++ AK W D++ + P ++++ VNAL KG L
Sbjct: 499 KRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSE 558
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A R++ M K KP V+ CN +I C + L +M + G +P+ +YN+LI
Sbjct: 559 AFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIY 618
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGC 427
K + M + + +ME+K G +P+ T+N +L + +E VL +M G
Sbjct: 619 GFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGV 678
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
TY ++ +V+ D + +EM ++G PD +
Sbjct: 679 NPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDK 718
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 150/332 (45%), Gaps = 6/332 (1%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
N+ + +L+ + A + EA F + G + A L+ L R VE+A +
Sbjct: 154 NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E ++ G ++ T+NI++N C G + + F ++ + PD VTY T ++A + +
Sbjct: 214 QEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQ 273
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G + A L AM KG P V T N +I+ LC + A EV EM G P+ TTY
Sbjct: 274 GLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 333
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERM 422
SL+ CK +M ++ +P+ + F+ ++ + + L +
Sbjct: 334 RSLLMEACKKGDAVETENIFSDMRSRD--VVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 391
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+ G Y ++++ Y + + EM ++G D +Y ++HGL + L
Sbjct: 392 KEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 451
Query: 483 EDALSYFHEMRLKGMVPEPRTGILVNDMNIKL 514
+A F+EM +G+ P+ T ++ D + KL
Sbjct: 452 GEADKLFNEMTERGLFPDSYTLTILIDGHCKL 483
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 180/415 (43%), Gaps = 55/415 (13%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A+ + +G +SPG +N +++ L + ++ +VF EM PD T
Sbjct: 277 EEAFELMHAMPSKG-FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD---STT 332
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y LL E +F + + DL F +++ R +++ A +F S K
Sbjct: 333 YRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 392
Query: 251 NEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
E G D I++ G+C G + EA ++++ C D VTY T ++ L K+ L
Sbjct: 393 -EAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 451
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
G A +LF M E+G PD T +ID C + A+E+ ++MK + +V TYN+L
Sbjct: 452 GEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTL 511
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV------------- 415
+ K+ ++T E +M K LP I+F+ L+ +L +
Sbjct: 512 LDGFGKVGDIDTAKEIWADMVSKE--ILPTPISFSILVNALCSKGHLSEAFRVWDEMISK 569
Query: 416 ---PWV----------------------LERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
P V LE+M G +YN ++ +V + K
Sbjct: 570 SIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKA 629
Query: 451 RHTWEEMEKK--GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ME+K G+ PD +Y ++HG + ++++A + +M +G+ P+ T
Sbjct: 630 FGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRST 684
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 178/423 (42%), Gaps = 88/423 (20%)
Query: 133 RFDW-EAAYTFFKWVSREGDYSPGSNVF--NAILDVL---GRARR---FVELIQVFDEMP 183
R W E A+ ++ +SR G G NV+ N +++ L G+ + F+ +Q P
Sbjct: 202 RIGWVELAWRIYQEISRSG---VGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYP 258
Query: 184 DLVNEKTYGILLNRYAAAHMVEEAI----------------------------GVFDRRK 215
D+V TY L++ Y++ ++EEA G ++R K
Sbjct: 259 DIV---TYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAK 315
Query: 216 E-FGEL------DDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
E F E+ D + +++LL+ C+ VE F + + D+ + +++ +
Sbjct: 316 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLF 375
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
GN+ +A ++ + ++ PD+V Y + +KG + A+ L M ++G DV
Sbjct: 376 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDV 435
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT N I+ LC +K + EA ++ EM RG P+ T LI CK+ ++ E +
Sbjct: 436 VTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKK 495
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
M++K K+ TYN +L +
Sbjct: 496 MKEKR----------------------------------IKLDVVTYNTLLDGFGKVGDI 521
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
D + W +M K + P S++++++ L KG L +A + EM K + P T ++
Sbjct: 522 DTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKP---TVMIC 578
Query: 508 NDM 510
N M
Sbjct: 579 NSM 581
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 5/218 (2%)
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
S C + + + + KL A F + KG + CN +I +L +
Sbjct: 149 SNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVEL 208
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A + +E+ G NV T N ++ LCK +ME V +L E+++K P+ +T+N L
Sbjct: 209 AWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEK--GVYPDIVTYNTL 266
Query: 406 LKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ + EE ++ M G TYN ++ ++ + + EM + G+
Sbjct: 267 ISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 326
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
PD +Y ++ KG + + F +MR + +VP+
Sbjct: 327 SPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPD 364
>gi|225454807|ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Vitis vinifera]
Length = 457
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 160/319 (50%), Gaps = 9/319 (2%)
Query: 182 MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+PD+V TY LL+ Y+ ++ A V R KE G D+ + +L+ + +
Sbjct: 39 LPDVV---TYNTLLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSR 95
Query: 242 AETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ FE + D+ + N +++ + LG EA R ++DII + P S T+ +N
Sbjct: 96 SLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMIN 155
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L G G AL L++ + +G P++VT N +I+ LC +++ A +LRE+ G +P
Sbjct: 156 GLCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRELGESGNVP 215
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPW 417
+ TY +++K + ++ E +E EM+ K + + ++ ++ +L K EE
Sbjct: 216 DAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYA--FDAFSYCAVIAALTKTGRLEEAND 273
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
++E+M R+ + +YN ++ LY + +E+E+ G+ D+ ++T++I GL
Sbjct: 274 IMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLC 333
Query: 478 DKGRLEDALSYFHEMRLKG 496
G +E AL + M G
Sbjct: 334 KAGNVEGALRHLKNMTKMG 352
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 13/249 (5%)
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
+ K +NI + C +G + +A+ D I+ PD VTY T ++A ++ + A +
Sbjct: 5 FSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSV 64
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
M E G PDV+T N +I A + + +L++ EM G P+V +YNSL+ K
Sbjct: 65 IHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFK 124
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMST 431
+ + + ++ N LP+ TFN ++ L + L ++R G
Sbjct: 125 LGKPDEANRVFQDIILTN--LLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPEL 182
Query: 432 DTYNVILKLYVNWDCEDK----VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
TYN++ +N C+ + R E+ + G PD +YT ++ + + E
Sbjct: 183 VTYNIL----INGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFE 238
Query: 488 YFHEMRLKG 496
F EM+ KG
Sbjct: 239 IFSEMKSKG 247
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 116/246 (47%), Gaps = 15/246 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A + ++++ R+G + P +N +++ L ++R+ ++ E+ PD + TY
Sbjct: 166 ALSLYRYLQRQG-FVPELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAI---TYT 221
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKN 251
++ + E+ +F K G D ++ ++ L + +E A E ++
Sbjct: 222 TVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARS 281
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ DI + N ++N +C G + + +I + E D T+ ++ L K G + A
Sbjct: 282 DIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGA 341
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
LR + M + G +V NC+ID LC ++ A+++ M+ + + TY+S++ +
Sbjct: 342 LRHLKNMTKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFASME----VKDSFTYSSMVHN 397
Query: 372 LCKIKR 377
LCK +R
Sbjct: 398 LCKARR 403
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 10/246 (4%)
Query: 154 PGSNVFNAILDVL------GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P S+ FN +++ L G A +Q +P+LV TY IL+N + + A
Sbjct: 145 PSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELV---TYNILINGLCKSRKLNAA 201
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNG 266
+ E G + D + ++ R + E E F E + + +D + ++
Sbjct: 202 RRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAA 261
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
G + EA + + +S + D V+Y T +N + GKL +L + E G + D
Sbjct: 262 LTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECD 321
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
T +ID LC + AL L+ M G + N +I LCK+ +++ +
Sbjct: 322 EYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFA 381
Query: 387 EMEQKN 392
ME K+
Sbjct: 382 SMEVKD 387
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N I +LC ++ +A V+ + G LP+V TYN+L+ + ++ Y + M++
Sbjct: 11 NICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKE 70
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCE 447
S P+ IT+N L+ + K + L E M R G + +YN ++ +
Sbjct: 71 AGIS--PDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKP 128
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GIL 506
D+ ++++ + P ++ +MI+GL + G ALS + ++ +G VPE T IL
Sbjct: 129 DEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNIL 188
Query: 507 VNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
+N + K R + I L LG GN
Sbjct: 189 INGL---CKSRKLNAARRI-LRELGESGN 213
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 21/238 (8%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP------DLVNEK 189
+E + F + +G Y+ + + A++ L + R E + ++M D+V
Sbjct: 233 FEQGFEIFSEMKSKG-YAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIV--- 288
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
+Y ++N Y +E + D +E G D L+ LC+ +VE A ++
Sbjct: 289 SYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNM 348
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI-IKSKCEPDSVTYATFVNALTKKGK 307
K F + N +++G C +G + A + + + +K DS TY++ V+ L K +
Sbjct: 349 TKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFASMEVK-----DSFTYSSMVHNLCKARR 403
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
A RL A G K +ID LC+ EA R +K++ L + Y
Sbjct: 404 YRHASRLLLACLRGGMKILRANQRSVIDGLCYSGYTSEA----RRLKSKIRLARILHY 457
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 185/435 (42%), Gaps = 79/435 (18%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR-----ARRFVELIQ-VFDEMPDLVNE 188
D+ AY FK + + G PG ++N + + +EL + + EM DL
Sbjct: 357 DYSYAYKLFKKMIKCG-CQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDL--- 412
Query: 189 KTYGILLNRYAAAHMVEEAIGV--FDRRKEF-------GELDDLSAFQNLLLWLCRYKHV 239
G++LN+ ++ G FD+ E G + D S + ++ +LC V
Sbjct: 413 ---GVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKV 469
Query: 240 EVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
E A FE +KN + T I+++ +C G + +A+ ++ ++++ C P+ VTY +
Sbjct: 470 EKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSL 529
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVV------------------------------ 328
++A K K+ A +LF+ M +G KP+VV
Sbjct: 530 IHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIE 589
Query: 329 ---------------------TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
T ++D LC R+ EA E+L M GC PN Y++
Sbjct: 590 SSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDA 649
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMER 424
LI CK ++E E +M ++ G C PN T++ L+ SL K+ + V VL +M
Sbjct: 650 LIDGFCKTGKLENAQEVFVKMSER-GYC-PNLYTYSSLINSLFKEKRLDLVLKVLSKMLE 707
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
N C + Y ++ ++ +ME+ G P+ +YT MI G G++E
Sbjct: 708 NSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQ 767
Query: 485 ALSYFHEMRLKGMVP 499
L + +M KG P
Sbjct: 768 CLELYRDMCSKGCAP 782
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 183/423 (43%), Gaps = 50/423 (11%)
Query: 92 INVQNILKTCSVSTKGEIEKALNQ-CELT----LTDDLIVNVINRYRFDW---EAAYTFF 143
+NV N + + G+ +KA CE+ + DD + + + D E A+ F
Sbjct: 419 VNVSNFARC--LCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLF 476
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNR 197
+ + + G P + ++D +A + FDEM P++V TY L++
Sbjct: 477 EEMKKNG-IVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVV---TYTSLIHA 532
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA--------------- 242
Y A V +A +F+ G ++ + L+ C+ ++ A
Sbjct: 533 YLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSD 592
Query: 243 -ETFFESEKNEFGYDIKTMNII-----LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
+ +F+ + N D +T NII ++G C V EA + + CEP+ + Y
Sbjct: 593 IDMYFKLDDN----DCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYD 648
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
++ K GKL A +F M E+G P++ T + +I++L +KR+ L+VL +M
Sbjct: 649 ALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLEN 708
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP 416
C PNV Y +I LCK+ + E Y + +ME+ C PN IT+ ++ K ++
Sbjct: 709 SCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEV--GCYPNVITYTAMIDGFGKIGKIE 766
Query: 417 WVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
LE M GC + TY V++ + D+ +EM++ SY +I
Sbjct: 767 QCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKII 826
Query: 474 HGL 476
G
Sbjct: 827 EGF 829
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 25/365 (6%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAI 208
+ P + ++ ++ L A + + +F+EM + + TY IL++ + A ++++A
Sbjct: 449 FVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQAR 508
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGW 267
FD ++ + +L+ + + V A FE E ++ T +++G
Sbjct: 509 NWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGH 568
Query: 268 CVLGNVYEA----KRFWKDIIKSK-----------CE-PDSVTYATFVNALTKKGKLGTA 311
C G + +A R DI S CE P+ +TY V+ L K ++ A
Sbjct: 569 CKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEA 628
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L M G +P+ + + +ID C ++ A EV +M RG PN+ TY+SLI
Sbjct: 629 HELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINS 688
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
L K KR++ V + L +M + SC PN + + ++ L K EE ++ +ME GC
Sbjct: 689 LFKEKRLDLVLKVLSKMLEN--SCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCY 746
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
+ TY ++ + ++ + +M KG P+ +Y V+I+ G L++A
Sbjct: 747 PNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRL 806
Query: 489 FHEMR 493
EM+
Sbjct: 807 LDEMK 811
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 184/438 (42%), Gaps = 32/438 (7%)
Query: 91 AINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
A+++ N ++T E + L Q L++ L+V V+N + E FF W SR+
Sbjct: 72 ALSISNAIRT---GFGAETQNFLRQFRGRLSEPLVVEVMNLVKHP-EFCVEFFLWASRQI 127
Query: 151 DYSPGSNVFNAILDVLG--------RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAH 202
YS V+NA++++L + +F L+Q+ D+ +L+ K L+ +
Sbjct: 128 GYSHTPVVYNALIELLCCNAVNNDRVSHKF--LMQIRDDDRELL-RKLLNFLIQKCCRNG 184
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMN 261
M A+ R K+FG + + L+ R ++ A N F D T+
Sbjct: 185 MWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLG 244
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
C G +A + K + PD+V Y V+ L + A+ + M
Sbjct: 245 CFAYSLCKAGRCGDALSLLE---KEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSI 301
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
P+VVT ++ K ++ +L M GC PN +NSL+ CK +
Sbjct: 302 SCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYA 361
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW--VLERMERNGCKMSTDTYNVILK 439
Y+ +M + C P + +N + S+ EE+P +LE E+ +M D V+ K
Sbjct: 362 YKLFKKMIK--CGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEM-LDLGVVLNK 418
Query: 440 LYVNWDCE--------DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
+ V+ DK EM KG PD +Y+ +I L D ++E A F E
Sbjct: 419 VNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEE 478
Query: 492 MRLKGMVPEPRTGILVND 509
M+ G+VP T ++ D
Sbjct: 479 MKKNGIVPSVYTYTILID 496
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 160/410 (39%), Gaps = 44/410 (10%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEA 207
++ P + +N ++ L A F E + + D M + N TY ILL+ +
Sbjct: 267 EFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRC 326
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE------SEKNEFGYDIKTMN 261
+ G + F +L+ C+ + A F+ + Y+I +
Sbjct: 327 KRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGS 386
Query: 262 IILNGWCVLGNVYE-AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
I N ++ E A++ + +++ + V + F L GK A + M
Sbjct: 387 ICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMS 446
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KG PD T + +I LC ++ +A + EMK G +P+V TY LI CK ++
Sbjct: 447 KGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQ 506
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVI 437
+ DEM + N C PN +T+ L+ + K +V + E M G K + TY +
Sbjct: 507 ARNWFDEMLRDN--CTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTAL 564
Query: 438 LKLYVNWDCEDKVRHTWEEME----------------KKGMGPDQRSYTVMIHGLYDKGR 481
+ + DK + M+ P+ +Y ++ GL R
Sbjct: 565 IDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANR 624
Query: 482 LEDALSYFHEMRLKGMVPEP-----------RTGILVN--DMNIKLKERG 518
+E+A M + G P +TG L N ++ +K+ ERG
Sbjct: 625 VEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERG 674
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 146/374 (39%), Gaps = 75/374 (20%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + A++D L +A R E ++ D M P N+ Y L++ + +E
Sbjct: 606 TPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEP---NQIVYDALIDGFCKTGKLEN 662
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILN 265
A VF + E G +L + +L+ L + K ++ V + + +N ++ +++
Sbjct: 663 AQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMID 722
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C +G EA R + + C P+ +TY ++ K GK+ L L++ M KG P
Sbjct: 723 GLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAP 782
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMK------------------NR------GCL-- 359
+ +T +I+ C + EA +L EMK NR G L
Sbjct: 783 NFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDE 842
Query: 360 -------PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
P + Y LI + K R+E L+E+ + N+ + L++SL
Sbjct: 843 LSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHA 902
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+V DK + M K + P+ ++ +
Sbjct: 903 SKV--------------------------------DKAFELYASMINKNVVPELSTFVHL 930
Query: 473 IHGLYDKGRLEDAL 486
I GL G+ ++AL
Sbjct: 931 IKGLTRVGKWQEAL 944
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 147/319 (46%), Gaps = 15/319 (4%)
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
LLN VE+A+ +FD F +D F L+ LC E A + F
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELL-GVMSGF 235
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK-SKCEPDSVTYATFVNALTKKGKLGT 310
G DI T N ++ G+C + +A +KD+ S C PD VTY + ++ K GK+
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A L M G P VT N ++D + A E+ +M + GC P+V T+ SLI
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMS 430
C++ ++ + +EM + PN T++ L+ +L + L+ E G S
Sbjct: 356 GYCRVGQVSQGFRLWEEMNAR--GMFPNAFTYSILINALCNENRL---LKARELLGQLAS 410
Query: 431 TDT------YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
D YN ++ + ++ EEMEKK PD+ ++T++I G KGR+ +
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 485 ALSYFHEMRLKGMVPEPRT 503
A+S FH+M G P+ T
Sbjct: 471 AVSIFHKMVAIGCSPDKIT 489
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 192/426 (45%), Gaps = 70/426 (16%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFV-------ELIQ-------------V 178
A F VSR D + +++AI+ VL A+ + +LIQ V
Sbjct: 53 ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSV 112
Query: 179 FDEMPDLVNEK----TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ--NLLL- 231
F+ + L + K +G+L+ ++ +VEEA+ V+ + +D L A Q N++L
Sbjct: 113 FNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYK------MDVLPAMQACNMVLD 166
Query: 232 -WLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
+ + + + + + + ++ T +++G C G+ +A R + ++I+ K P
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP 226
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
V Y + L + ++ A +F+ M G P++ T N ++D C + +ALE+
Sbjct: 227 TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ-------------KNGSC-- 395
EM G LPNV T+ LI LCK M + ++L +M +G C
Sbjct: 287 XEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKA 346
Query: 396 ------------------LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTY 434
LP+ T++ L+K L + EE +L+ M++ G + TY
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N ++ Y +K +M +KG+ P+ +++ +I G G++E A+ + EM +
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466
Query: 495 KGMVPE 500
KG++P+
Sbjct: 467 KGLLPD 472
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 193/465 (41%), Gaps = 75/465 (16%)
Query: 103 VSTKGEIEKALNQCELTLTDDLIVNVINRYRFD--WEAAYTFFKWVSREGDYSPGSNVFN 160
V K ++ A+ C + L ++ + RFD W+ + V+R SP +
Sbjct: 148 VYYKMDVLPAMQACNMVLD-----GLVKKGRFDTMWK---VYGDMVARGA--SPNVVTYG 197
Query: 161 AILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
++D R F++ ++FDEM P +V Y IL+ + EA +F
Sbjct: 198 TLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV---IYTILIRGLCGESRISEAESMFRTM 254
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVE---------------------------------- 240
+ G L +L + ++ C+ HV+
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEM 314
Query: 241 VAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
V+ F + FG +I N +++G+C GN+ EA +I K + PD TY+
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
+ L ++ A L Q M +KG P+ VT N +ID C + + +A+EV +M +G
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEV 415
PN+ T+++LI CK +ME EM K LP+ + + L+ K +E
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG--LLPDVVAYTALIDGHFKDGNTKEA 492
Query: 416 PWVLERMERNGCKMSTDTYNVI-------------LKLYVNWDCEDKVRHTWEEMEKKGM 462
+ + M+ G + T + + +KL++ D E+++
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLC 552
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILV 507
P+ YT +I GL GR+ A +F +MR G+ P+ T I++
Sbjct: 553 SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVI 597
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 28/256 (10%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A + + ++G + P + +N ++D + + I+V +M P+++ T
Sbjct: 385 EEADGLLQEMKKKG-FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNII---T 440
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF-FESE 249
+ L++ Y A +E A+G++ G L D+ A+ L+ +K E F E
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG--HFKDGNTKEAFRLHKE 498
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFW-------------KDIIKSKCEPDSVT 294
E G ++ T++ +++G C G + +A + + ++ +S C P+ V
Sbjct: 499 MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVM 558
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y + L G++ A + F M G +PDV TC II + + + + ++
Sbjct: 559 YTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADIL 618
Query: 355 NRGCLPNVTTYNSLIK 370
G +PN + Y L K
Sbjct: 619 KMGIIPNSSVYRVLAK 634
>gi|302758538|ref|XP_002962692.1| hypothetical protein SELMODRAFT_62267 [Selaginella moellendorffii]
gi|300169553|gb|EFJ36155.1| hypothetical protein SELMODRAFT_62267 [Selaginella moellendorffii]
Length = 495
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 182/385 (47%), Gaps = 11/385 (2%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGS--NVFNAILDVLGRARRFVELIQVFD-E 181
IV + +Y + EA F + + R+ GS + N G+ + ++L + + E
Sbjct: 59 IVCGLAKYGYFDEAVELFEEMIRRKVAPPLGSCIGILNGYCQDGGKMEQAIQLFRKMEGE 118
Query: 182 MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
N Y +LL VEE +F KE G +L + +L LC+ V+
Sbjct: 119 YGCPPNTYAYNVLLTGLKKKDRVEEMREMFLEMKEKGCEPNLVTYCTYILGLCKAGRVDD 178
Query: 242 AETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A E + D +I++N +C +G +YE ++ ++++ K +PD V +++ V+
Sbjct: 179 AMVVKKEMIQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPDVVCFSSLVD 238
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC-L 359
L K G+ G A RLF+ M E+G KPD V + I+D+ + + +ALE++ E +R L
Sbjct: 239 CLDKAGRYGDAYRLFRRMMEQGCKPDAVIASVILDSFTKRGEVAQALELVNEFVDRDLPL 298
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL 419
P+ + N L+K + ++E L M + P + ++ LL+ L + + L
Sbjct: 299 PSAGSINQLVKRIVVGDKVEDGVRLLKTMASRGSR--PLQCSYATLLRELCRRKNAVEAL 356
Query: 420 ERM-ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM---EKKGMGPDQRSYTVMIHG 475
E + E ++ + ++++ D+ R +EEM +++ + P +Y +++
Sbjct: 357 ELVKEMRAAGYTSVDLSCVIEMLCKMKMVDEARGLYEEMKSSQQQELLPSVSTYNILLER 416
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPE 500
L +GRL DA F EM G +P+
Sbjct: 417 LCGEGRLGDAKDLFQEMIESGRIPD 441
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 151/358 (42%), Gaps = 49/358 (13%)
Query: 182 MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-E 240
+P+L TY +L+ H V+EA +F G S++ ++ L +Y + E
Sbjct: 15 VPELA---TYLMLIEGLGRDHRVKEAFDLFQEIHARGFTAKASSYSYIVCGLAKYGYFDE 71
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGN---------------------------- 272
E F E + + + + ILNG+C G
Sbjct: 72 AVELFEEMIRRKVAPPLGSCIGILNGYCQDGGKMEQAIQLFRKMEGEYGCPPNTYAYNVL 131
Query: 273 ---------VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
V E + + ++ + CEP+ VTY T++ L K G++ A+ + + M +K
Sbjct: 132 LTGLKKKDRVEEMREMFLEMKEKGCEPNLVTYCTYILGLCKAGRVDDAMVVKKEMIQKSC 191
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD V + +I+A C +I E ++L EM + P+V ++SL+ L K R Y
Sbjct: 192 SPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPDVVCFSSLVDCLDKAGRYGDAYR 251
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER----MERNGCKMSTDTYNVILK 439
M ++ C P+ + + +L S K EV LE ++R+ S + N ++K
Sbjct: 252 LFRRMMEQG--CKPDAVIASVILDSFTKRGEVAQALELVNEFVDRDLPLPSAGSINQLVK 309
Query: 440 LYVNWD-CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
V D ED VR + M +G P Q SY ++ L + +AL EMR G
Sbjct: 310 RIVVGDKVEDGVR-LLKTMASRGSRPLQCSYATLLRELCRRKNAVEALELVKEMRAAG 366
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 11/244 (4%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD----LVNEKTYGIL 194
AY F+ + +G P + + + ILD + + +++ +E D L + + L
Sbjct: 249 AYRLFRRMMEQG-CKPDAVIASVILDSFTKRGEVAQALELVNEFVDRDLPLPSAGSINQL 307
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEF 253
+ R VE+ + + G ++ LL LCR K+ VE E E
Sbjct: 308 VKRIVVGDKVEDGVRLLKTMASRGSRPLQCSYATLLRELCRRKNAVEALELV--KEMRAA 365
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE---PDSVTYATFVNALTKKGKLGT 310
GY ++ ++ C + V EA+ ++++ S+ + P TY + L +G+LG
Sbjct: 366 GYTSVDLSCVIEMLCKMKMVDEARGLYEEMKSSQQQELLPSVSTYNILLERLCGEGRLGD 425
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A LFQ M E GR PDV + +++ALC +I + E+ +++ + G +P+ +++
Sbjct: 426 AKDLFQEMIESGRIPDVNSYEILVEALCKAGKIFQGHELFKQLISLGFIPSSEMCATIVD 485
Query: 371 HLCK 374
LCK
Sbjct: 486 GLCK 489
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 5/230 (2%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A +++ K P+ TY + L + ++ A LFQ + +G + + I+
Sbjct: 1 DAIGVLREMQKRNVVPELATYLMLIEGLGRDHRVKEAFDLFQEIHARGFTAKASSYSYIV 60
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI-KRMETVYEYLDEMEQKNG 393
L EA+E+ EM R P + + ++ C+ +ME + +ME + G
Sbjct: 61 CGLAKYGYFDEAVELFEEMIRRKVAPPLGSCIGILNGYCQDGGKMEQAIQLFRKMEGEYG 120
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
C PN +N LL LKK + V + E M+ GC+ + TY + D
Sbjct: 121 -CPPNTYAYNVLLTGLKKKDRVEEMREMFLEMKEKGCEPNLVTYCTYILGLCKAGRVDDA 179
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+EM +K PD Y+++I+ G++ + EM K + P+
Sbjct: 180 MVVKKEMIQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPD 229
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 147/356 (41%), Gaps = 38/356 (10%)
Query: 152 YSPGSNVFNAILDV---LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAI 208
Y+P ++ +++ G + +LI+V N YG ++ + EA
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGW 267
F G L D + L+ C+ + A FF E + D+ T I++G+
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C +G++ EA + + ++ EPDSVT+ +N K G + A R+ M + G P+V
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT +ID LC + + A E+L EM G PN+ TYNS++ LCK +E + + E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
E G T TY ++ Y
Sbjct: 517 FEAA----------------------------------GLNADTVTYTTLMDAYCKSGEM 542
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
DK + +EM KG+ P ++ V+++G G LED + M KG+ P T
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 201/486 (41%), Gaps = 56/486 (11%)
Query: 82 FQRYPGDEIAINVQN----ILKTCSVSTKGEIEKALNQCELT-LTDDLIV--NVINRY-R 133
F+ +P + NV + I C + E L EL T D+I V+N Y R
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 134 F-DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV 186
F + + + + + R+G P S ++ +I+ +L R + E + F EM PD V
Sbjct: 294 FGELDKVWKLIEVMKRKG-LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETF 245
Y L++ + + A F D+ + ++ C+ VE + F
Sbjct: 353 ---VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E D T ++NG+C G++ +A R +I++ C P+ VTY T ++ L K+
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G L +A L MW+ G +P++ T N I++ LC I EA++++ E + G + TY
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQK-------------NGSCL---------------- 396
+L+ CK M+ E L EM K NG CL
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 397 ----PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
PN TFN L+K + + + M G TY ++K + +
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
++EM+ KG +Y+V+I G + + +A F +MR +G+ + +D
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Query: 510 MNIKLK 515
K K
Sbjct: 710 TKYKGK 715
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 110/524 (20%), Positives = 197/524 (37%), Gaps = 71/524 (13%)
Query: 37 NSVTSHKTLIPIINLQARNSEFLFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQN 96
+++S + I + +LQ+R F + L + D + E + N
Sbjct: 13 GTLSSFRNFIQLFSLQSRGLSF--------STLTDTRPFPDYSPKKASVRDTEFVHQITN 64
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
++K + + ++L E D ++ V+ + + D+ FF W D + S
Sbjct: 65 VIK---LRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLES 121
Query: 157 NVFNAILDVLGRARRFVE-LIQVFDEMPDL---------------------VNEKTYGIL 194
L V + + + LI F E P L + + + +
Sbjct: 122 LCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVF 181
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFG---ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
++ EA VF++ +G +D + + L C YK F E +
Sbjct: 182 FQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC-YKTATAIIVFREFPEV 240
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+++ + NI+++ C LG + EA + PD ++Y+T VN + G+L
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+L + M KG KP+ II LC ++ EA E EM +G LP+ Y +LI
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMST 431
CK + ++ EM + +IT P VL
Sbjct: 361 FCKRGDIRAASKFFYEMHSR-------DIT--------------PDVL------------ 387
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TY I+ + + + EM KG+ PD ++T +I+G G ++DA +
Sbjct: 388 -TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 492 MRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
M G P T + D K + + + ++ +GL+ N
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 4/239 (1%)
Query: 154 PGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N+I++ L G V+L+ F+ + TY L++ Y + +++A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCV 269
G + F L+ C + +E E + T N ++ +C+
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
N+ A +KD+ PD TY V K + A LFQ M KG V T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+ +I +K+ EA EV +M+ G + ++ K KR +T+ + +DE+
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 170/356 (47%), Gaps = 7/356 (1%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
RE P + N IL L R R + ++F+++P N T+ I+++ + EA
Sbjct: 149 RELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-PNVFTFNIVIDFLCKEGELAEA 207
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNG 266
+F R KE G L D+ F +L+ + + EV + E ++ D+ T N ++N
Sbjct: 208 RSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINC 267
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C G + A ++ + + + VT++TFV+A K+G + A++LF M +G +
Sbjct: 268 FCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALN 327
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
T C+ID C R+ +A+ +L EM +G NV TY L+ LCK +++ + L
Sbjct: 328 EFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLR 387
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
ME+ NE+ + L+ K E+ +L M+ G ++ Y +++ N
Sbjct: 388 MMEK--AGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCN 445
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ + +M++ G+ P+ YT M+ + G++ +A++ ++ G P
Sbjct: 446 VHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP 501
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 144/311 (46%), Gaps = 16/311 (5%)
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
LL+ A ++++A+ R +E + ++LL L R + + FE
Sbjct: 128 LLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAP- 186
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
++ T NI+++ C G + EA+ + + + C PD VT+ + ++ K G+L +
Sbjct: 187 --NVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
L + M G K DVVT N +I+ C R+ A MK G + NV T+++ + C
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMS 430
K + + +M + G L NE T+ L+ K ++ +L+ M R G ++
Sbjct: 305 KEGLVREAMKLFAQMRVR-GMAL-NEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN 362
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEE----MEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
TY V+ V+ C+++ E+ MEK G+ ++ YT +IHG + E AL
Sbjct: 363 VVTYTVL----VDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKAL 418
Query: 487 SYFHEMRLKGM 497
EM+ KG+
Sbjct: 419 GLLSEMKNKGL 429
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 142/385 (36%), Gaps = 68/385 (17%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P FN+++D G+ E+ Q+ +EM D+V TY L+N + +E A
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVV---TYNALINCFCKFGRMETA 277
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK------NEFGY------ 255
G F K G + ++ F + C+ V A F + NEF Y
Sbjct: 278 YGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDG 337
Query: 256 ------------------------DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
++ T ++++G C V EA+ + + K+ +
Sbjct: 338 TCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRAN 397
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+ Y T ++ AL L M KG + D+ +I LC ++ EA +L
Sbjct: 398 ELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLT 457
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKR----METVYEYLDEMEQKNGSCLPNEIT-FNYLL 406
+M G PN Y +++ K + + + + LD Q N CL + FN ++
Sbjct: 458 KMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMV 517
Query: 407 KSLKKPEEVPWVL------------------ERMERNGCKMSTDTYNVILKLYVNWDCED 448
++V + +M +G ++ Y + + N +
Sbjct: 518 HKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMP 577
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMI 473
+ R + EM G+ PD+ Y +I
Sbjct: 578 EAREVFSEMIGHGIAPDRAVYNCLI 602
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 28/247 (11%)
Query: 159 FNAILDVLGRARRFVE---LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+ ++D L + R+ E ++++ ++ NE Y L++ + E+A+G+ K
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNV 273
G D+S + L+ LC ++ A++ ++ +E G + + +++ G V
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLL-TKMDESGLEPNYIIYTTMMDACFKSGKV 484
Query: 274 YEAKRFWKDIIKSKCEP----------------------DSVTYATFVNALTKKGKLGTA 311
EA + I+ S +P D V Y ++ K+G L A
Sbjct: 485 PEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 544
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L M + G + D+ C I C +PEA EV EM G P+ YN LI
Sbjct: 545 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQ 604
Query: 372 LCKIKRM 378
+ +I+ +
Sbjct: 605 IPEIREL 611
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 217/485 (44%), Gaps = 65/485 (13%)
Query: 66 TAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLI 125
T +L+HSLAN+ S+ + + + ++ S I A++ C+ + +I
Sbjct: 104 TFKLLHSLANAKRYSKIRSF--------LDGFVRNGSDHQVHSIFHAISMCDNVCVNSII 155
Query: 126 VNVI-----NRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
+++ N RF E + FK G Y + ++ L + R ++ V+
Sbjct: 156 ADMLVLAYANNSRF--ELGFEAFKRSGYYG-YKLSALSCKPLMIALLKENRSADVEYVYK 212
Query: 181 EM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
EM P++ T+ +++N + +A V + K +G ++ ++ L+ C
Sbjct: 213 EMIRRKIQPNVF---TFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 235 RY----KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEP 290
+ K + E +N+ ++ T NI+++G+ N+ + + +K+++ +P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+ ++Y + +N L GK+ A+ + M G +P+++T N +I+ C + EAL++
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN-------------GSC-- 395
+K +G +P YN LI CK+ +++ + +EME++ G C
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 396 -----------------LPNEITFNYLLKSLKKPEE---VPWVLERMERNGCKMSTDTYN 435
LP+ +TF+ L++ + E +L+ M + G K TYN
Sbjct: 450 GNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 436 VILKLYVNWDCEDKVRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+++K Y + +MEK + + + SY V++ G KG+LEDA +EM
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Query: 495 KGMVP 499
KG+VP
Sbjct: 570 KGLVP 574
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 170/391 (43%), Gaps = 29/391 (7%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD------------- 180
D + ++ W+ + D S + +L L A+R+ ++ D
Sbjct: 79 LDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHS 138
Query: 181 -----EMPD--LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG-ELDDLSAFQNLLLW 232
M D VN +L+ YA E F R +G +L LS ++
Sbjct: 139 IFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIAL 198
Query: 233 LCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
L + +V + E + + ++ T N+++N C G + +A+ +D+ C P+
Sbjct: 199 LKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNV 258
Query: 293 VTYATFVNALTK---KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
V+Y T ++ K GK+ A + + M E P++ T N +ID +P +++V
Sbjct: 259 VSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKV 318
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+EM ++ PNV +YNSLI LC ++ D+M + PN IT+N L+
Sbjct: 319 FKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV--SAGVQPNLITYNALINGF 376
Query: 410 KKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
K + + L+ ++ G +T YN+++ Y D EEME++G+ PD
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+Y +I GL G +E A F ++ KG+
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 105/272 (38%), Gaps = 80/272 (29%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
D P +N++++ L + E I + D+M P+L+ TY L+N + M+
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI---TYNALINGFCKNDML 382
Query: 205 EEAIGVFDRRK-------------------EFGELDD----------------LSAFQNL 229
+EA+ +F K + G++DD + + L
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 230 LLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
+ LCR ++E A+ F+ ++ D+ T +I++ G+C G +A K++ K +
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 290 PDSVTY---------------AT---------------------FVNALTKKGKLGTALR 313
P +TY AT + ++KGKL A
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
L M EKG P+ +T + + + + +P+
Sbjct: 563 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 182/444 (40%), Gaps = 82/444 (18%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A+ +S +G P +NAI++ L + +++ V DEM PD T
Sbjct: 306 EEAFELMDSMSGKG-LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD---TAT 361
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y ILL + +A +FD G + DL +F L+ L + ++ A +F K
Sbjct: 362 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 421
Query: 251 N----------------------------------EFG--YDIKTMNIILNGWCVLGNVY 274
N E G D+ T N ILNG C +
Sbjct: 422 NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLS 481
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA + ++ + PD T+ T +N +K G + A+ LF+ M ++ KPDVVT N +I
Sbjct: 482 EADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLI 541
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN-- 392
D C + + E+ +M +R PN +Y LI C + + + DEM +K
Sbjct: 542 DGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE 601
Query: 393 -----------GSC--------------------LPNEITFNYLLKSLKKPEEVP---WV 418
G C +P+ IT+N L+ K E + +
Sbjct: 602 ATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFAL 661
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+ +ME +G TYNVIL + + +M ++G+ PD+ +YT +I+G
Sbjct: 662 VNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVT 721
Query: 479 KGRLEDALSYFHEMRLKGMVPEPR 502
+ L++A EM +G VP+ +
Sbjct: 722 QNNLKEAFRVHDEMLQRGFVPDDK 745
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 171/408 (41%), Gaps = 69/408 (16%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------------PDLV--------NEKTYGILLNRY 198
F+A++ +L R+RR + V M LV N + +L+ Y
Sbjct: 135 FSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTY 194
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDI 257
A + E F K G ++A +LL L + V++A E + E ++ ++
Sbjct: 195 VQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNV 254
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T+NI++N C + K F D+ + PD VTY T +NA ++G L A L +
Sbjct: 255 YTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS 314
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M KG KP V T N II+ LC + A VL EM G P+ TYN L+ C+
Sbjct: 315 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 374
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK--------------------PEEVPW 417
M DEM + +P+ ++F+ L+ L K P+ V +
Sbjct: 375 MMDAERIFDEMPSQ--GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 432
Query: 418 VL------------------ERMERNGCKMSTDTYNVILKLYVNWDCEDKV----RHTWE 455
+ + M GC + TYN IL N C++K+ +
Sbjct: 433 TILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTIL----NGLCKEKMLSEADELFT 488
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
EM ++G+ PD ++T +I+G G + A++ F M + + P+ T
Sbjct: 489 EMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 536
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 7/240 (2%)
Query: 128 VINRYRFD--WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD- 184
+IN Y D A T F+ + + + P +N ++D + ++ +++++M
Sbjct: 505 LINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 563
Query: 185 --LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
N +YGIL+N Y V EA ++D E G + ++ CR + A
Sbjct: 564 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 623
Query: 243 ETFFESEK-NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ F + D T N ++NG+ N+ A + S PD +TY +N
Sbjct: 624 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 683
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+++G++ A + M E+G PD T +I+ + + EA V EM RG +P+
Sbjct: 684 FSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 34/206 (16%)
Query: 326 DVVTCNC------------IIDALCFKKRIPEALEV-LREMKNRG--------------- 357
D +T NC +I L +R+P+A V LR ++ G
Sbjct: 119 DSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYG 178
Query: 358 -CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE--E 414
C N ++ L++ + +++ E ++ K G C+ N LL L K +
Sbjct: 179 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK-GLCVSIN-ACNSLLGGLVKVGWVD 236
Query: 415 VPW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
+ W + + + R+G +++ T N+++ + + +ME+KG+ PD +Y +I
Sbjct: 237 LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 296
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +G LE+A M KG+ P
Sbjct: 297 NAYCRQGLLEEAFELMDSMSGKGLKP 322
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 147/356 (41%), Gaps = 38/356 (10%)
Query: 152 YSPGSNVFNAILDV---LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAI 208
Y+P ++ +++ G + +LI+V N YG ++ + EA
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 779
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGW 267
F G L D + L+ C+ + A FF E + D+ T I++G+
Sbjct: 780 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 839
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C +G++ EA + + ++ EPDSVT+ +N K G + A R+ M + G P+V
Sbjct: 840 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 899
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
VT +ID LC + + A E+L EM G PN+ TYNS++ LCK +E + + E
Sbjct: 900 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 959
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
E G T TY ++ Y
Sbjct: 960 FEAA----------------------------------GLNADTVTYTTLMDAYCKSGEM 985
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
DK + +EM KG+ P ++ V+++G G LED + M KG+ P T
Sbjct: 986 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 1041
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 201/486 (41%), Gaps = 56/486 (11%)
Query: 82 FQRYPGDEIAINVQN----ILKTCSVSTKGEIEKALNQCELT-LTDDLIV--NVINRY-R 133
F+ +P + NV + I C + E L EL T D+I V+N Y R
Sbjct: 677 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 736
Query: 134 F-DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV 186
F + + + + + R+G P S ++ +I+ +L R + E + F EM PD V
Sbjct: 737 FGELDKVWKLIEVMKRKG-LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETF 245
Y L++ + + A F D+ + ++ C+ VE + F
Sbjct: 796 ---VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E D T ++NG+C G++ +A R +I++ C P+ VTY T ++ L K+
Sbjct: 853 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G L +A L MW+ G +P++ T N I++ LC I EA++++ E + G + TY
Sbjct: 913 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 972
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQK-------------NGSCL---------------- 396
+L+ CK M+ E L EM K NG CL
Sbjct: 973 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 1032
Query: 397 ----PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
PN TFN L+K + + + M G TY ++K + +
Sbjct: 1033 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 1092
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
++EM+ KG +Y+V+I G + + +A F +MR +G+ + +D
Sbjct: 1093 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 1152
Query: 510 MNIKLK 515
K K
Sbjct: 1153 TKYKGK 1158
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 109/510 (21%), Positives = 190/510 (37%), Gaps = 64/510 (12%)
Query: 56 SEFLFLGRIETAQLVHSLANSD--EKSEFQRYPGDEIAIN----VQNILKTCSVSTKGEI 109
SEFLF R Q L+ S + F Y + ++ V I + +
Sbjct: 458 SEFLFRDREREKQKSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPL 517
Query: 110 EKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRA 169
++L E D ++ V+ + + D+ FF W D + S L V +
Sbjct: 518 RRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKD 577
Query: 170 RRFVE-LIQVFDEMPDL---------------------VNEKTYGILLNRYAAAHMVEEA 207
+ + LI F E P L + + + + ++ EA
Sbjct: 578 LKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREA 637
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCR--YKHVEVAETFFESEKNEFGYDIKTMNIILN 265
VF++ +G + + + L L + YK F E + +++ + NI+++
Sbjct: 638 RRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIH 697
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C LG + EA + PD ++Y+T VN + G+L +L + M KG KP
Sbjct: 698 FVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP 757
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ II LC ++ EA E EM +G LP+ Y +LI CK + ++
Sbjct: 758 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 817
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
EM + +IT + L TY I+ +
Sbjct: 818 YEMHSR-------DITPDVL---------------------------TYTAIISGFCQIG 843
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
+ + EM KG+ PD ++T +I+G G ++DA + M G P T
Sbjct: 844 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 903
Query: 506 LVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
+ D K + + + ++ +GL+ N
Sbjct: 904 TLIDGLCKEGDLDSANELLHEMWKIGLQPN 933
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 4/239 (1%)
Query: 154 PGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N+I++ L G V+L+ F+ + TY L++ Y + +++A +
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 991
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCV 269
G + F L+ C + +E E + T N ++ +C+
Sbjct: 992 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 1051
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
N+ A +KD+ PD TY V K + A LFQ M KG V T
Sbjct: 1052 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 1111
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
+ +I +K+ EA EV +M+ G + ++ K KR +T+ + +DE+
Sbjct: 1112 YSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 1170
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 167/354 (47%), Gaps = 17/354 (4%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
VF A+++ + R + ++ +EM D VN Y I++N Y + EA +
Sbjct: 351 VFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEM 410
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNV 273
G D ++ +L+ C+ + A ET+ +N F T N +L G+C LG++
Sbjct: 411 TGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSI 470
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+A R W ++K P+ ++ +T ++ K GK AL L++ +G + T N +
Sbjct: 471 DDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTV 530
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I+ LC +R+PEA E++ +MK C P++ TY +L CKI M+ L+E+E N
Sbjct: 531 INGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELE--NL 588
Query: 394 SCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
P FN L+ K+ +V +L M G +T Y ++ W C++
Sbjct: 589 GFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALI---AGW-CKEGD 644
Query: 451 RHT----WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
HT + EM +KG+ P+ + ++ Y KG+ ++A + M+P+
Sbjct: 645 LHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPD 698
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 162/362 (44%), Gaps = 14/362 (3%)
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAH 202
V +E +S S F+ +L L A + +QVFDEM L ++ ++ +LNR A
Sbjct: 165 VYKEFSFSAAS--FDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTG 222
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM-- 260
+ + VF++ + G L D + C+ K V A F E E + G ++ +
Sbjct: 223 DLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVE-EMTKMGVEVNLVAY 281
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+ ++NG+C +G +A+R + P+ VTY V + + A + Q + +
Sbjct: 282 HAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRK 341
Query: 321 -KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
K D +I+ C R+ +A +L EM + N+ YN +I CK+ RM
Sbjct: 342 NKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMV 401
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNV 436
+ L EM P+ ++N L+ K + E M RNG +T TYN
Sbjct: 402 EAHNILHEM--TGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNA 459
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+LK + + D W M KKG+ P++ S + ++ G + G+ E AL+ + E +G
Sbjct: 460 LLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARG 519
Query: 497 MV 498
+
Sbjct: 520 LA 521
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 152/374 (40%), Gaps = 13/374 (3%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTY 191
D A F+ + R G P + + + V ++ +EM + VN Y
Sbjct: 223 DLGATVAVFEQMQRAGAL-PDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAY 281
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEK 250
++N Y +A + D G ++ + L+ C K++E AE E K
Sbjct: 282 HAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRK 341
Query: 251 N-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
N + D ++NG+C +G + +A R +++ S+ + + Y +N K G++
Sbjct: 342 NKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMV 401
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A + M G +PD + N ++D C K + +A E M G TYN+L+
Sbjct: 402 EAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALL 461
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL----ERMERN 425
K C + ++ M +K + PNEI+ + LL K + L E + R
Sbjct: 462 KGFCSLGSIDDALRLWFLMLKKGIA--PNEISCSTLLDGFFKSGKTEKALNLWKETLAR- 518
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G +T T+N ++ + + ++M++ PD +Y + G G ++ A
Sbjct: 519 GLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRA 578
Query: 486 LSYFHEMRLKGMVP 499
+E+ G P
Sbjct: 579 SRILNELENLGFAP 592
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 229 LLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
++ LC+ +E A+ K++ F D T + +++G G V A ++
Sbjct: 731 VIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVG 790
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
P+ VTY + + L K G+L A+ LF+ +W KG P+ +T N +ID C I EA
Sbjct: 791 LTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAF 850
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
++ + M G P V TY+ LI LC ME + LD+M + N PN +T+ L++
Sbjct: 851 KLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVD--PNYVTYWTLIQ 908
Query: 408 SLKKPEEV 415
+ E V
Sbjct: 909 GYVRCESV 916
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 159/373 (42%), Gaps = 41/373 (10%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIG 209
+ FN +++ L + R E ++ D+M PD++ TY L + Y ++ A
Sbjct: 524 TTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDII---TYRTLFSGYCKIGDMDRASR 580
Query: 210 VFDRRKEFGELDDLSAFQNLLLW-LCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
+ + + G + F +L+ +H +V + FE + ++ GWC
Sbjct: 581 ILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWC 640
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV- 327
G+++ A + ++I+ P+ ++ V+ +KGK A + Q + PD+
Sbjct: 641 KEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDIS 700
Query: 328 -------------------------VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
+ N +I LC RI +A +L ++K++G + +
Sbjct: 701 APRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADN 760
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVL 419
TY+SLI ++ ++ D M + PN +T+N L+ L K E+ +
Sbjct: 761 FTYSSLIHGCSASGFVDVAFDLRDTMLSVGLT--PNIVTYNSLIYGLCKSGELSRAVSLF 818
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+++ G + TYN ++ + + + M ++G+ P +Y+++I+GL +
Sbjct: 819 KKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQ 878
Query: 480 GRLEDALSYFHEM 492
G +E+A+ +M
Sbjct: 879 GYMEEAIKLLDQM 891
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 8/254 (3%)
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
EF + + +++L G + A + + ++ C + + +N L + G LG
Sbjct: 168 EFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGAT 227
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ +F+ M G PD T + A C K + ALE + EM G N+ Y++++
Sbjct: 228 VAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNG 287
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
C++ + LD + + S PN +T+ L+K K EE V++ + +N +
Sbjct: 288 YCEVGQTNDARRMLDSLPGRGFS--PNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNK-Q 344
Query: 429 MSTD--TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ D + ++ Y + EM + + Y +MI+G GR+ +A
Sbjct: 345 LVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAH 404
Query: 487 SYFHEMRLKGMVPE 500
+ HEM G+ P+
Sbjct: 405 NILHEMTGVGVRPD 418
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 5/191 (2%)
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
NI++ G C LG + +AK D+ D+ TY++ ++ + G + A L M
Sbjct: 729 NIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLS 788
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G P++VT N +I LC + A+ + +++ +G PN TYN+LI CK +
Sbjct: 789 VGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITE 848
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVI 437
++ M ++ P T++ L+ L EE +L++M N + TY +
Sbjct: 849 AFKLKQRMIEEG--IHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTL 906
Query: 438 LKLYVNWDCED 448
++ YV + D
Sbjct: 907 IQGYVRCESVD 917
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 131/323 (40%), Gaps = 19/323 (5%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N T+ ++N + EA + D+ K++ D+ ++ L C+ ++ A
Sbjct: 523 NTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRIL 582
Query: 247 -ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E E F I+ N ++ G + + ++ P++V Y + K+
Sbjct: 583 NELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKE 642
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G L TA L+ M EKG P++ C+ ++ K + EA VL+ + +P+++
Sbjct: 643 GDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISA- 701
Query: 366 NSLIKHLCKIKRMET--VYEYLDEMEQKN---GSCLPNEITFNYLLKSLKKPEEVPWVLE 420
R+E V ++D + N + N + F L L + E+ +L
Sbjct: 702 ----------PRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFG--LCKLGRIEDAKNLLA 749
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
++ G TY+ ++ D + M G+ P+ +Y +I+GL G
Sbjct: 750 DLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSG 809
Query: 481 RLEDALSYFHEMRLKGMVPEPRT 503
L A+S F ++ KG+ P T
Sbjct: 810 ELSRAVSLFKKLWTKGISPNAIT 832
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
+I T N ++ G C G + A +K + P+++TY T ++ K G + A +L
Sbjct: 794 NIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLK 853
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
Q M E+G P V T + +I+ LC + + EA+++L +M PN TY +LI+ +
Sbjct: 854 QRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRC 913
Query: 376 KRMETVYEYLDE 387
+ ++ LD+
Sbjct: 914 ESVDVPIMPLDQ 925
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 174/405 (42%), Gaps = 68/405 (16%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHM---- 203
P +NAI+ RA R QV D M PD+V TY IL+ + M
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIV---TYNILIGSLCSRGMLDSA 180
Query: 204 -------------------------------VEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
++EA+ + D E D+ + +++
Sbjct: 181 LEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRG 240
Query: 233 LCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
+CR +V+ A S ++ + D+ T NI+L G G D++ CE +
Sbjct: 241 MCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEAN 300
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
VTY+ ++++ + GK+ + L + M +KG KPD + +I ALC + R+ A+EVL
Sbjct: 301 VVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLD 360
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRME---TVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
M + GC+P++ YN+++ LCK KR + +++E L E+ C PN ++N + +
Sbjct: 361 VMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEV-----GCSPNASSYNSMFSA 415
Query: 409 L----KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK-VRHTWE-----EME 458
L K + +LE +++ G TYN ++ C D V E EME
Sbjct: 416 LWSTGHKVRALGMILEMLDK-GVDPDGITYNSLISCL----CRDGMVDEAIELLVDMEME 470
Query: 459 KKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
P SY +++ GL R+ DA+ M KG P T
Sbjct: 471 SSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETT 515
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 147/314 (46%), Gaps = 7/314 (2%)
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE- 252
L++ + +++AI V + G DL A+ ++ CR ++ A + KN+
Sbjct: 98 LIHGLFTSKTIDKAIQVMHILENHGH-PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKG 156
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
F DI T NI++ C G + A F ++K C+P VTY + A +G + A+
Sbjct: 157 FSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAM 216
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+L M E +PD+ T N II +C + + A +++ + ++G P+V TYN L++ L
Sbjct: 217 KLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGL 276
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
+ E YE + +M + C N +T++ L+ S+ K EE +L+ M++ G K
Sbjct: 277 LNQGKWEAGYELMSDMVAR--GCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKP 334
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
Y+ ++ D + M G PD +Y ++ L + R ++ALS F
Sbjct: 335 DGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIF 394
Query: 490 HEMRLKGMVPEPRT 503
++ G P +
Sbjct: 395 EKLGEVGCSPNASS 408
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 141/309 (45%), Gaps = 5/309 (1%)
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG 254
L+R A E++ G D+ L+ L K ++ A +N
Sbjct: 64 LSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH 123
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ N I+ G+C + A + + PD VTY + +L +G L +AL
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+ ++ KP VVT +I+A + I EA+++L EM P++ TYNS+I+ +C+
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMST 431
++ ++ + + K + P+ IT+N LL+ L K E ++ M GC+ +
Sbjct: 244 EGYVDRAFQIISSISSKGYA--PDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANV 301
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TY+V++ ++ ++M+KKG+ PD Y +I L +GR++ A+
Sbjct: 302 VTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDV 361
Query: 492 MRLKGMVPE 500
M G VP+
Sbjct: 362 MISDGCVPD 370
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 16/249 (6%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E K + ++G P ++ ++ L + R I+V D M PD+VN
Sbjct: 318 EEGVGLLKDMKKKG-LKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVN--- 373
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL--LWLCRYKHVEVAETFFES 248
Y +L +EA+ +F++ E G + S++ ++ LW +K V E
Sbjct: 374 YNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHK-VRALGMILEM 432
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDII--KSKCEPDSVTYATFVNALTKKG 306
D T N +++ C G V EA D+ S+C+P V+Y + L K
Sbjct: 433 LDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVS 492
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
++ A+ + AM +KG +P+ T +I+ + F + +A ++ + N + ++
Sbjct: 493 RVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISE-HSFE 551
Query: 367 SLIKHLCKI 375
L K CK+
Sbjct: 552 RLYKTFCKL 560
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 156/317 (49%), Gaps = 10/317 (3%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL--DDLSAFQNLLLWLCRYKHVEVAE 243
+N TYGIL+N A+ V R+ G+L ++ + ++ LC+ K V A
Sbjct: 156 LNHVTYGILINGLCKMGQTRAALQVL--RQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAY 213
Query: 244 TFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
+ E + T + ++ G+C++G +A R + +++ PD+ T+ V+AL
Sbjct: 214 GLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDAL 273
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K+GK+ A + M ++G +P VVT N ++D C + +A VL + PN
Sbjct: 274 CKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNS 333
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VL 419
+YN +I CKIK ++ EM + P+++T+N L+ L K +P+ ++
Sbjct: 334 RSYNIMINGFCKIKMVDEALCLFHEMCCR--GIAPHKVTYNSLIDGLCKAGRIPYAWELV 391
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+ M N TYN ++ ++ DK +++++ G+ P+ +Y ++I GL
Sbjct: 392 DEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKG 451
Query: 480 GRLEDALSYFHEMRLKG 496
G+L++A F ++ +KG
Sbjct: 452 GQLKNAQDVFQDLLIKG 468
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 151/327 (46%), Gaps = 28/327 (8%)
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK--HVEVAETFFESEKNEFGYDIKTM 260
+V+ A+ F+R ++ + + F +L +L + K + V + E D+ T+
Sbjct: 46 VVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTL 105
Query: 261 NIILN---------------------GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
+I++N G C+ G V EA F ++ + VTY +
Sbjct: 106 SILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILI 165
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
N L K G+ AL++ + + K +VV + IID LC K + +A + EM +
Sbjct: 166 NGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIP 225
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVP 416
P V T++SLI C + + + + +EM KN + P+ TFN L+ +L K +E
Sbjct: 226 PTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNIN--PDAYTFNILVDALCKEGKIKEAK 283
Query: 417 WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
V+ M + G + + TYN ++ Y + K +H + + + P+ RSY +MI+G
Sbjct: 284 NVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGF 343
Query: 477 YDKGRLEDALSYFHEMRLKGMVPEPRT 503
+++AL FHEM +G+ P T
Sbjct: 344 CKIKMVDEALCLFHEMCCRGIAPHKVT 370
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 163/353 (46%), Gaps = 19/353 (5%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
+++ I+D L + + + ++ EM P +V T+ L+ + ++A +F
Sbjct: 195 MYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVV---TFSSLIYGFCIVGKFKDAFRLF 251
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIILNGWCV 269
+ D F L+ LC+ ++ A+ E G + + T N +++G+C+
Sbjct: 252 NEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKE-GVEPTVVTYNTLMDGYCL 310
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ V +AK I + + P+S +Y +N K + AL LF M +G P VT
Sbjct: 311 VNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVT 370
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLP-NVTTYNSLIKHLCKIKRMETVYEYLDEM 388
N +ID LC RIP A E++ EM N C+P ++ TYNSLI CK + ++ + ++
Sbjct: 371 YNSLIDGLCKAGRIPYAWELVDEMHNN-CIPADIVTYNSLIDVFCKNQHVDKAIALVKKI 429
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWD 445
K PN T+N L+ L K ++ V + + G ++ TYN+++
Sbjct: 430 --KEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEG 487
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
D+ +ME G+ PD +Y +I L+ K E A EM +KG+V
Sbjct: 488 LFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVV 540
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 18/274 (6%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
+ +P + FN ++D L + + E V M P +V TY L++ Y + V
Sbjct: 258 NINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVV---TYNTLMDGYCLVNEV 314
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
+A V + ++ ++ C+ K V+ A F E T N +
Sbjct: 315 GKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSL 374
Query: 264 LNGWCVLGNVYEAKRFWK--DIIKSKCEP-DSVTYATFVNALTKKGKLGTALRLFQAMWE 320
++G C G + A W+ D + + C P D VTY + ++ K + A+ L + + E
Sbjct: 375 IDGLCKAGRIPYA---WELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKE 431
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G +P++ T N +ID LC ++ A +V +++ +G N TYN +I LCK +
Sbjct: 432 HGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDE 491
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE 414
L +ME NG +P+ +T+ ++++L +E
Sbjct: 492 AEVLLSKMED-NG-IIPDAVTYETIIQALFHKDE 523
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 12/215 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P S +N +++ + + E + +F EM P V TY L++ A +
Sbjct: 330 APNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKV---TYNSLIDGLCKAGRIPY 386
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
A + D D+ + +L+ C+ +HV+ A + K E G ++ T NI++
Sbjct: 387 AWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIK-EHGIQPNMCTYNILI 445
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G C G + A+ ++D++ ++ TY +N L K+G A L M + G
Sbjct: 446 DGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGII 505
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
PD VT II AL K +A ++LREM +G +
Sbjct: 506 PDAVTYETIIQALFHKDENEKAQKLLREMVIKGVV 540
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 181/415 (43%), Gaps = 43/415 (10%)
Query: 127 NVINRYRF--DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP- 183
+IN Y D AA + G +P S + + + RA +VF MP
Sbjct: 77 TLINAYCLAGDIPAAKQHLTSLLHAG-LAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPL 135
Query: 184 --DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
L TY LL+ A MV EA+ VF + D + ++ LC E
Sbjct: 136 RGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEE 195
Query: 242 AETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
AE E N F +I N +++G+C G + A + ++ + ++C P+ TY ++
Sbjct: 196 AEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIH 255
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K GK+ A+ LF M E G +P+VVT +I C + + A +L M+ G +P
Sbjct: 256 GLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVP 315
Query: 361 NVTTYNSLIKHLCK------------------IKRMETVYEYL-------------DEME 389
N T++ LI LCK +K E VY L DE+
Sbjct: 316 NDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELM 375
Query: 390 QKNGS--CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
QK S +P+ +++ L+ L KK + +LE M G + S TY +I+ V
Sbjct: 376 QKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVRE 435
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + +++M G+ PD +YTV + ++GR+EDA S +M +G+ P
Sbjct: 436 VGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 167/423 (39%), Gaps = 52/423 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
P N +L L R R F ++ + MP N +TY L+N Y A + A
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESLASRMPAR-NLRTYTTLINAYCLAGDIPAAKQHLTS 97
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF------ESEKNEFGYDIKTMNIILNGW 267
G D A+ + +L CR + A F + F Y +L+G
Sbjct: 98 LLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTY-----TALLHGL 152
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
G V EA + + C PD+ YAT V+ L + G+ A L + G +P++
Sbjct: 153 LGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNI 212
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
V N +ID C + AL+V M C PNV TY LI LCK ++E
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272
Query: 388 MEQKN-------------GSC--------------------LPNEITFNYLLKSL---KK 411
M + G C +PN+ TF+ L+ +L +K
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
EE L + + G K++ Y ++ D ++M +G PD SY+
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVI--KLTS 529
+I GL + +L A +M KG+ P T ++ D + +E G +G K I K+ +
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV--REVGSEGPKKIFDKMIA 450
Query: 530 LGL 532
G+
Sbjct: 451 TGI 453
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 160/342 (46%), Gaps = 9/342 (2%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAI 208
+ P V+NA++D A ++VF+ M N +TY L++ + VE A+
Sbjct: 208 FEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGW 267
+F R E G ++ + L+ C H++ A E N + T +++++
Sbjct: 268 VLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDAL 327
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C V EA+ F ++K + + V Y + ++ L K GK+ A L Q M +G PD
Sbjct: 328 CKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA 387
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ + +ID LC +K++ +A +L +M +G + TY +I L + E + D+
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK 447
Query: 388 MEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
M + P+ +T+ ++S + E+ ++ +M G + TYN +++ Y N
Sbjct: 448 MIATGIN--PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANL 505
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ T+E M KG P++ SYTV++ + K ++++
Sbjct: 506 GLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV 547
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 120/283 (42%), Gaps = 8/283 (2%)
Query: 220 LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
L L LL+ L R++ E+ +++T ++N +C+ G++ AK+
Sbjct: 38 LPPLRCLNTLLMALARHRMFPDMESLASRMPAR---NLRTYTTLINAYCLAGDIPAAKQH 94
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
++ + PDS Y +FV + G L A R+F M +G T ++ L
Sbjct: 95 LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ EA+ V M+ C P+ Y +++ LC+ R T + E + PN
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGR--TEEAEVLLEEAMSNGFEPNI 212
Query: 400 ITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
+ +N L+ E+ V E M+ N C + TY ++ ++ +
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
M + G+ P+ +YT +I G ++G L+ A H M G+VP
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVP 315
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 141/336 (41%), Gaps = 41/336 (12%)
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
A R + L++ +P N+ T+ +L++ VEEA + G + + +
Sbjct: 301 AFRLLHLMETNGLVP---NDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS 357
Query: 229 LLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
L+ LC+ ++ A+ + +E F D + + +++G C + +A +D+++
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
+ VTY ++ L ++ ++F M G PD+VT + + C + R+ +A
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
++ +M +RG PN+ TYN+LI+ + + + TF ++
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS-----------------TFEVMVG 520
Query: 408 SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP--- 464
KP E D+Y V+L+L V D W+ + K +
Sbjct: 521 KGWKPNE-----------------DSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNY 563
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
D+ + ++I+GL KG + + S M+ G P
Sbjct: 564 DEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS 599
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 164/362 (45%), Gaps = 12/362 (3%)
Query: 149 EGDY---SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAH 202
E DY +P F +++D LG+ R + +V+++M D N Y L+ +
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMN 261
E+ ++ DL + + + E FE K F D ++ +
Sbjct: 497 RKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYS 556
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I+++G G E + + + C D+ Y ++ K GK+ A +L + M K
Sbjct: 557 ILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK 616
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G +P VVT +ID L R+ EA + E K++ NV Y+SLI K+ R++
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVIL 438
Y L+E+ QK + PN T+N LL +L K EE+ L + M+ C + TY +++
Sbjct: 677 YLILEELMQKGLT--PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+K W+EM+K+GM P SYT MI GL G + +A + F + G V
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 499 PE 500
P+
Sbjct: 795 PD 796
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 185/427 (43%), Gaps = 25/427 (5%)
Query: 93 NVQNILKTCSVSTKG----EIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR 148
N Q + C+V G E L+ + ++ V+ R + D A +F+W R
Sbjct: 32 NRQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLK-DVNRAIEYFRWYER 90
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNR-------YAAA 201
+ +N++L V+ R R F L Q+ EM + +G +N A
Sbjct: 91 RTELPHCPESYNSLLLVMARCRNFDALDQILGEM----SVAGFGPSVNTCIEMVLGCVKA 146
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKT 259
+ + E V ++F SA+ L+ H ++ T F+ + E GY+ +
Sbjct: 147 NKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQ-QMQELGYEPTVHL 205
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
++ G+ G V A ++ S + D V Y +++ K GK+ A + F +
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
G KPD VT +I LC R+ EA+E+ ++ +P YN++I + +
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNV 436
Y L E ++ GS +P+ I +N +L L+ K +E V E M+++ + TYN+
Sbjct: 326 EAYSLL-ERQRAKGS-IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNI 382
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ + D + M+K G+ P+ R+ +M+ L +L++A + F EM K
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 497 MVPEPRT 503
P+ T
Sbjct: 443 CTPDEIT 449
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 160/355 (45%), Gaps = 23/355 (6%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGIL 194
D + T+ + + G+ G +F I +ARRFV PD ++Y IL
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEI-----KARRFV---------PD---ARSYSIL 558
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-F 253
++ A E +F KE G + D A+ ++ C+ V A E K + F
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
+ T +++G + + EA +++ + E + V Y++ ++ K G++ A
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+ + + +KG P++ T N ++DAL + I EAL + MK C PN TY LI LC
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMS 430
K+++ + + EM QK G P+ I++ ++ L K E + +R + NG
Sbjct: 739 KVRKFNKAFVFWQEM-QKQGM-KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
+ YN +++ N + +EE ++G+ ++ V++ L+ LE A
Sbjct: 797 SACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 165/369 (44%), Gaps = 9/369 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
+ A+ FF + G P + +++ VL +A R E +++F+ + + Y
Sbjct: 255 DMAWKFFHEIEANG-LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
++ Y +A +EA + +R++ G + + A+ +L L + V+ A FE K +
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA 373
Query: 254 GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
++ T NI+++ C G + A + K+ P+ T V+ L K KL A
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
+F+ M K PD +T +ID L R+ +A +V +M + C N Y SLIK+
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMS 430
R E ++ +M +N C P+ N + + K PE+ + E ++
Sbjct: 494 NHGRKEDGHKIYKDMINQN--CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFH 490
+Y++++ + ++ + M+++G D R+Y ++I G G++ A
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 491 EMRLKGMVP 499
EM+ KG P
Sbjct: 612 EMKTKGFEP 620
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 181/415 (43%), Gaps = 43/415 (10%)
Query: 127 NVINRYRF--DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP- 183
+IN Y D AA + G +P S + + + RA +VF MP
Sbjct: 77 TLINAYCLAGDIPAAKQHLTSLLHAG-LAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPL 135
Query: 184 --DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVE 240
L TY LL+ A MV EA+ VF + D + ++ LC + E
Sbjct: 136 RGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEE 195
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
E+ N F +I N +++G+C G + A + ++ + ++C P+ TY ++
Sbjct: 196 AEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIH 255
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K GK+ A+ LF M E G +P+VVT +I C + + A +L M+ G +P
Sbjct: 256 GLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVP 315
Query: 361 NVTTYNSLIKHLCK------------------IKRMETVYEYL-------------DEME 389
N T++ LI LCK +K E VY L DE+
Sbjct: 316 NDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELM 375
Query: 390 QKNGS--CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
QK S +P+ +++ L+ L KK + +LE M G + S TY +I+ V
Sbjct: 376 QKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVRE 435
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + +++M G+ PD +YTV + ++GR+EDA S +M +G+ P
Sbjct: 436 VGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 167/423 (39%), Gaps = 52/423 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
P N +L L R R F ++ + MP N +TY L+N Y A + A
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESLASRMPAR-NLRTYTTLINAYCLAGDIPAAKQHLTS 97
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF------ESEKNEFGYDIKTMNIILNGW 267
G D A+ + +L CR + A F + F Y +L+G
Sbjct: 98 LLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTY-----TALLHGL 152
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
G V EA + + C PD+ YAT V+ L + G+ A L + G +P++
Sbjct: 153 LGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNI 212
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
V N +ID C + AL+V M C PNV TY LI LCK ++E
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272
Query: 388 MEQKN-------------GSC--------------------LPNEITFNYLLKSL---KK 411
M + G C +PN+ TF+ L+ +L +K
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
EE L + + G K++ Y ++ D ++M +G PD SY+
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVI--KLTS 529
+I GL + +L A +M KG+ P T ++ D + +E G +G K I K+ +
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV--REVGSEGPKKIFDKMIA 450
Query: 530 LGL 532
G+
Sbjct: 451 TGI 453
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 160/342 (46%), Gaps = 9/342 (2%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAI 208
+ P V+NA++D A ++VF+ M N +TY L++ + VE A+
Sbjct: 208 FEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGW 267
+F R E G ++ + L+ C H++ A E N + T +++++
Sbjct: 268 VLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDAL 327
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C V EA+ F ++K + + V Y + ++ L K GK+ A L Q M +G PD
Sbjct: 328 CKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA 387
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ + +ID LC +K++ +A +L +M +G + TY +I L + E + D+
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK 447
Query: 388 MEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
M + P+ +T+ ++S + E+ ++ +M G + TYN +++ Y N
Sbjct: 448 MIATGIN--PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANL 505
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ T+E M KG P++ SYTV++ + K ++++
Sbjct: 506 GLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV 547
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 120/285 (42%), Gaps = 8/285 (2%)
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
L L LL+ L R++ E+ +++T ++N +C+ G++ AK
Sbjct: 36 APLPPLRCLNTLLMALARHRMFPDMESLASRMPAR---NLRTYTTLINAYCLAGDIPAAK 92
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+ ++ + PDS Y +FV + G L A R+F M +G T ++ L
Sbjct: 93 QHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGL 152
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
+ EA+ V M+ C P+ Y +++ LC+ R T + E + P
Sbjct: 153 LGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGR--TEEAEVLLEEAMSNGFEP 210
Query: 398 NEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N + +N L+ E+ V E M+ N C + TY ++ ++ +
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLF 270
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
M + G+ P+ +YT +I G ++G L+ A H M G+VP
Sbjct: 271 SRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVP 315
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 152/348 (43%), Gaps = 21/348 (6%)
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
A R + L++ +P N+ T+ +L++ VEEA + G + + +
Sbjct: 301 AFRLLHLMETNGLVP---NDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS 357
Query: 229 LLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
L+ LC+ ++ A+ + +E F D + + +++G C + +A +D+++
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
+ VTY ++ L ++ ++F M G PD+VT + + C + R+ +A
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
++ +M +RG PN+ TYN+LI+ + + + + M K PNE ++ LL+
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWK--PNEDSYTVLLR 535
Query: 408 SLKKP---------------EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
+ K +++ +LE + ++ D Y+ ++ D ++ +H
Sbjct: 536 LVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKH 595
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ M+ + P + YT +I L DAL+ M G +P
Sbjct: 596 FFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPH 643
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 154/405 (38%), Gaps = 64/405 (15%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLV------NEKTYGILLNRYAAAHMVEEA 207
P F+ ++D L + R VE Q+F + LV NE Y L++ ++ A
Sbjct: 315 PNDWTFSVLIDALCK-REKVEEAQLF--LGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAA 371
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILN 265
+ + G + D ++ +L+ LCR K + A E EK + T II++
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPV-TYTIIID 430
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
K+ + +I + PD VTY FV + ++G++ A + M ++G P
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL----------------- 368
++VT N +I + +A M +G PN +Y L
Sbjct: 491 NLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIW 550
Query: 369 ------------------------------IKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
I+ LC++ R+E + M +N + P+
Sbjct: 551 KIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFF--MGMQNANLTPS 608
Query: 399 EITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
E + ++ LK + +L+ M ++G ++Y +I+ + +
Sbjct: 609 EDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFG 668
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++ K D+ + ++I+GL KG + + S M+ G P
Sbjct: 669 DLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS 713
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 118/285 (41%), Gaps = 30/285 (10%)
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
++FD+M PD+V TY + + Y +E+A + + + G +L + L+
Sbjct: 443 KIFDKMIATGINPDIV---TYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499
Query: 231 LWLCRYKHVEVAETFFES------EKNEFGYDIKTMNII--------LNGWCVLGNVYEA 276
V A + FE + NE Y + ++ ++ W + ++ +
Sbjct: 500 RGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIW-KIADMKDL 558
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
+ +DI + + + Y+ F+ L + +L A F M P IID
Sbjct: 559 QVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDC 618
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
C K + +AL +L M G LP++ +Y +I LC+ T E ++ K +
Sbjct: 619 CCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNY- 677
Query: 397 PNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
+EI + L+ L + E +L M+ +G + S +T N ++
Sbjct: 678 -DEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS-NTINAMI 720
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/524 (23%), Positives = 212/524 (40%), Gaps = 100/524 (19%)
Query: 79 KSEFQRYPGDEIAINVQNILKTC---------SVSTKGEIEKALNQCELTLTDDLIVNVI 129
K E +R P + I NIL C S+ST G++ K Q ++ + L+ +
Sbjct: 131 KMEIRRIP---LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC 187
Query: 130 NRYRFDWEAAYTFFKWVSREGDY---------SPGSNVFNAILDVLGRARRFVELIQVFD 180
R A F ++ G +P FN +++ L R +E + +
Sbjct: 188 LEDRI--SEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 245
Query: 181 EMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
+M ++ TYG ++N + A+ + + +E D+ + ++ LC+
Sbjct: 246 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 305
Query: 238 HVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
H A+ F SE E G ++ T N +++G+C G +A+R +D+I+ + PD +T+
Sbjct: 306 HHSDAQYLF-SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 364
Query: 296 ATFVNALTKKGKLGTALRL-------------------------------FQAMWEKGRK 324
++A K+GKL A +L + M++
Sbjct: 365 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 424
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDVVT N IID C KR+ E +++LRE+ RG + N TTYN+LI C++ + +
Sbjct: 425 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 484
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER-------------------- 424
EM +G C P+ IT N LL + E++ LE E
Sbjct: 485 FQEM-ISHGVC-PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 542
Query: 425 ------------------NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQ 466
+G + TYNV++ + + +M+ G PD
Sbjct: 543 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 602
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDM 510
+Y +I G G ++ ++ EMR G + T +V D+
Sbjct: 603 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADL 646
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 169/426 (39%), Gaps = 59/426 (13%)
Query: 130 NRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-----PD 184
+ Y + A FF ++ R + + N ++ V R R I ++ +M P
Sbjct: 81 SHYFKSLDDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIP- 138
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
+N ++ IL+ + H + ++ F + + G D+ F LL LC + A
Sbjct: 139 -LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA 197
Query: 245 FFE---------SEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
F + E G + T N ++NG C+ G V EA ++ D V
Sbjct: 198 LFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 257
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY T VN + K G +AL L M E KPDVV + IID LC +A + EM
Sbjct: 258 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 317
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK-- 411
+G PNV TYN +I C R L +M ++ + P+ +TFN L+ + K
Sbjct: 318 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN--PDVLTFNALISASVKEG 375
Query: 412 ------------------PEEVPWVLERMERNGCK--------------MSTD--TYNVI 437
P+ V + M CK S D T+N I
Sbjct: 376 KLFEAEKLCDEMLHRCIFPDTVTY--NSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTI 433
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ +Y D+ E+ ++G+ + +Y +IHG + L A F EM G+
Sbjct: 434 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 493
Query: 498 VPEPRT 503
P+ T
Sbjct: 494 CPDTIT 499
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 84/224 (37%), Gaps = 39/224 (17%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP FN I+DV RA+R E +Q+ E+ + N TY L++ + + A
Sbjct: 424 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 483
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKNEFGY-------- 255
+F G D LL C + +E A FE + + Y
Sbjct: 484 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 543
Query: 256 ----------------------DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
D++T N++++G+C + +A + + + EPD+
Sbjct: 544 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 603
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
TY T + K G++ ++ L M G D T + D +
Sbjct: 604 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLI 647
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 25/205 (12%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
L A+ F M V CN +I R A+ + R+M+ R N+ ++N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNG 426
LIK C ++ ++ + P+ +TFN LL L + + E + G
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQ--PDVVTFNTLLHGLCLEDRIS---EALALFG 200
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ T + +++M + G+ P ++ +I+GL +GR+ +A
Sbjct: 201 YMVETGSL-------------------FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 241
Query: 487 SYFHEMRLKGMVPEPRT-GILVNDM 510
+ ++M KG+ + T G +VN M
Sbjct: 242 ALVNKMVGKGLHIDVVTYGTIVNGM 266
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 170/393 (43%), Gaps = 46/393 (11%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMP------DLVNEKTYGILLNRYAAAHMVEE 206
SP + +N +L R ++ ++FDEMP DLV ++ L+ + +++
Sbjct: 460 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLV---SFSALIGLLSKNGCLDQ 516
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILN 265
A+ F K G D + L+ CR + E + E + D+ T N ILN
Sbjct: 517 ALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILN 576
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C + EA + ++ + PD T+ T +N K G + A+ LF+ M ++ KP
Sbjct: 577 GLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKP 636
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DVVT N +ID C + + E+ +M +R PN +Y LI C + + +
Sbjct: 637 DVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLW 696
Query: 386 DEMEQKN-------------GSC--------------------LPNEITFNYLLKSLKKP 412
DEM +K G C +P+ IT+N L+ K
Sbjct: 697 DEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKE 756
Query: 413 EEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
E + ++ +ME +G TYNVIL + + +M ++G+ PD+ +Y
Sbjct: 757 ENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTY 816
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
T +I+G + L++A EM +G VP+ +
Sbjct: 817 TSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 849
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 171/408 (41%), Gaps = 69/408 (16%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------------PDLV--------NEKTYGILLNRY 198
F+A++ +L R+RR + V M LV N + +L+ Y
Sbjct: 239 FSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTY 298
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDI 257
A + E F K G ++A +LL L + V++A E + E ++ ++
Sbjct: 299 VQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNV 358
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T+NI++N C + K F D+ + PD VTY T +NA ++G L A L +
Sbjct: 359 YTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS 418
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M KG KP V T N II+ LC + A VL EM G P+ TYN L+ C+
Sbjct: 419 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 478
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK--------------------PEEVPW 417
M DEM + +P+ ++F+ L+ L K P+ V +
Sbjct: 479 MMDAERIFDEMPSQ--GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 536
Query: 418 VL------------------ERMERNGCKMSTDTYNVILKLYVNWDCEDKV----RHTWE 455
+ + M GC + TYN IL N C++K+ +
Sbjct: 537 TILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTIL----NGLCKEKMLSEADELFT 592
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
EM ++G+ PD ++T +I+G G + A++ F M + + P+ T
Sbjct: 593 EMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVT 640
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 7/240 (2%)
Query: 128 VINRYRFD--WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD- 184
+IN Y D A T F+ + + + P +N ++D + ++ +++++M
Sbjct: 609 LINGYXKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 667
Query: 185 --LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
N +YGIL+N Y V EA ++D E G + ++ CR + A
Sbjct: 668 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 727
Query: 243 ETFFESEK-NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ F + D T N ++NG+ N+ A + S PD +TY +N
Sbjct: 728 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 787
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+++G++ A + M E+G PD T +I+ + + EA V EM RG +P+
Sbjct: 788 FSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 34/206 (16%)
Query: 326 DVVTCNC------------IIDALCFKKRIPEALEV-LREMKNRG--------------- 357
D +T NC +I L +R+P+A V LR ++ G
Sbjct: 223 DSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYG 282
Query: 358 -CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE--E 414
C N ++ L++ + +++ E ++ K G C+ N LL L K +
Sbjct: 283 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK-GLCVSINAC-NSLLGGLVKVGWVD 340
Query: 415 VPW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
+ W + + + R+G +++ T N+++ + + +ME+KG+ PD +Y +I
Sbjct: 341 LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 400
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +G LE+A M KG+ P
Sbjct: 401 NAYCRQGLLEEAFELMDSMSGKGLKP 426
>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 192/429 (44%), Gaps = 50/429 (11%)
Query: 113 LNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR----EGDYSPGSNVFNAILDVLGR 168
LNQ L +L++ VI + + A FF W S +YS + AI+D+L
Sbjct: 51 LNQFSPHLDSNLVIEVIKEQQPNPYQALFFFNWASNLNPNPNNYSHNHRCYVAIIDLLLS 110
Query: 169 ARRFV---ELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
F L++ DL+ K L+ Y + + AI F + KE + L +
Sbjct: 111 HSLFPIAKNLLEKHGTFSDLLVSK----LIRAYGYSGDTKSAIFWFHKVKEIQQGKCLFS 166
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEF--------------GY---------------- 255
+ +L L + + VA++FF+ N+ G+
Sbjct: 167 WNAILGVLVKVNQINVAKSFFDQIVNDAVVKPDASTYTTMIRGFCKVGMIDNARKVFDEM 226
Query: 256 ----DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKLGT 310
++ T N ++NG+C G++ A+ F +++SK C PD+VTY+T ++ KKG+L
Sbjct: 227 ICEPNLITCNTLINGYCKKGDMENARIFLCRMMESKDCLPDTVTYSTLIDGYCKKGELNE 286
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A + M +G P++ T N II LC + + EA +L +M+ G NV T+ S++K
Sbjct: 287 ARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEARRLLTKMRLNGVKENVATHLSILK 346
Query: 371 HLCKIKRMETVYEYLDEMEQKNG--SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCK 428
L + E Y EM +K +E+ K ++KP+E +L+ M+ G
Sbjct: 347 GLSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCK-MRKPDEAISLLKEMQAKGIS 405
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY-DKGRLEDALS 487
S ++N +L++ V DK ++++ G P+ SY+ +I GL GR+++
Sbjct: 406 RSVGSFNAVLRILVEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRSHGRMQEVAG 465
Query: 488 YFHEMRLKG 496
+M G
Sbjct: 466 LVDDMLQDG 474
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 20/231 (8%)
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
N+ E + D++ SK + A G +A+ F + E + + + N
Sbjct: 119 NLLEKHGTFSDLLVSK----------LIRAYGYSGDTKSAIFWFHKVKEIQQGKCLFSWN 168
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCL-PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
I+ L +I A ++ N + P+ +TY ++I+ CK+ ++ + DEM
Sbjct: 169 AILGVLVKVNQINVAKSFFDQIVNDAVVKPDASTYTTMIRGFCKVGMIDNARKVFDEM-- 226
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVP----WVLERMERNGCKMSTDTYNVILKLYVNWDC 446
C PN IT N L+ K ++ ++ ME C T TY+ ++ Y
Sbjct: 227 ---ICEPNLITCNTLINGYCKKGDMENARIFLCRMMESKDCLPDTVTYSTLIDGYCKKGE 283
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
++ R + M +G P+ +Y +I+GL +G +++A +MRL G+
Sbjct: 284 LNEARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEARRLLTKMRLNGV 334
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 92/214 (42%), Gaps = 5/214 (2%)
Query: 161 AILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF 217
+IL L A + E I F EM ++ K + +++ Y +EAI + +
Sbjct: 343 SILKGLSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCKMRKPDEAISLLKEMQAK 402
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWC-VLGNVYE 275
G + +F +L L ++ A + KN ++ + + ++ G C G + E
Sbjct: 403 GISRSVGSFNAVLRILVEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRSHGRMQE 462
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
D+++ E D+ Y+ V + G A+R F K ++ + + ++
Sbjct: 463 VAGLVDDMLQDGFEMDATLYSCLVGGFCEAGNEEMAMRAFYDSINKNYVINLQSFSFFVN 522
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+C K ++ EA ++ ++M R L +V +Y ++
Sbjct: 523 LMCGKGKVIEAEQIFKDMCRRCSLVDVDSYQRVL 556
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY--KHVEVAETFFESEKNEFGYDIKTMN 261
+++A+ + + K G L +L ++ ++ LCR + EVA + ++ F D +
Sbjct: 424 LDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRSHGRMQEVAGLVDDMLQDGFEMDATLYS 483
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++ G+C GN A R + D I + +++ FVN + KGK+ A ++F+ M +
Sbjct: 484 CLVGGFCEAGNEEMAMRAFYDSINKNYVINLQSFSFFVNLMCGKGKVIEAEQIFKDMCRR 543
Query: 322 GRKPDVVTCNCIID 335
DV + ++D
Sbjct: 544 CSLVDVDSYQRVLD 557
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 163/371 (43%), Gaps = 43/371 (11%)
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
LV+ + LLN ++ A+ + D E D+ AF ++ LCR K ++ A +
Sbjct: 6 LVDTRVCTALLNGLCKTGQLDRAMLLLD---EMPCSPDMVAFTVVINGLCREKRLDEAFS 62
Query: 245 FFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
E + + D T N+ ++G C V +A + K + + KC P +VTY V+ L
Sbjct: 63 VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 122
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K G+L A+ + + M EKG P + T +ID L R+ EA + +M GC P+
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 182
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEM----------------------------------- 388
Y +LI L KI +++ YL++M
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242
Query: 389 -EQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
++ + S TFN L+ +L K E E +++M C + TY ++ ++
Sbjct: 243 FDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTG 504
D+ +E ++G PD +YT +I GL GR+E+ FHEMR +G P+ T
Sbjct: 303 GRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 362
Query: 505 ILVNDMNIKLK 515
+ D +K K
Sbjct: 363 AALIDGFMKAK 373
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 160/349 (45%), Gaps = 43/349 (12%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
FN ++ L +A R E I +M P L TY L++ + ++EA+
Sbjct: 257 FNPLVAALCKAERTEEAIAFVKKMSERRCFPTLF---TYTSLVDGFLKLGRLDEALLQLK 313
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLG 271
E G + D + +++ LC+ VE E F E + D T +++G+
Sbjct: 314 EAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAK 373
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+ +A R ++ +++S +VTY ++ L K G++ A F AM E+G VVT +
Sbjct: 374 MIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYS 433
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
++D C + + A+E+ R M +RGC PN+ +YN +I+ LC+ ++ Y Y +++ Q+
Sbjct: 434 ALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQR 493
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
P+ TFN L L +R++ G D V
Sbjct: 494 R--LCPDVYTFNSFLHGL---------CQRLDTVG---------------------DGV- 520
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+E M +G P+ SY++++ G+ G LE L FHEM +G+ P+
Sbjct: 521 ELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPD 569
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 159/364 (43%), Gaps = 18/364 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + ++D L +A R E ++F +M PD Y L++ A ++E
Sbjct: 143 SPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF---VYTALISGLAKIGKLDE 199
Query: 207 AIGVFDRRKEFG---ELDDLSAFQNLLL-WLCRYKHVEVAETFFESEKNEFGYDIKTMNI 262
A+ ++ E G ++ NL++ LC ++E A +F+ + T N
Sbjct: 200 ALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNP 259
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ C EA F K + + +C P TY + V+ K G+L AL + E+G
Sbjct: 260 LVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERG 319
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PD VT IID LC R+ E E EM+NRG P+ TY +LI K K + +
Sbjct: 320 FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAH 379
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILK 439
+M Q + + +T+N +L L K V ME GC + TY+ ++
Sbjct: 380 RVYRQMLQSGT--VVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMD 437
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + + M +G P+ SY ++I GL G+L A YF ++ + + P
Sbjct: 438 GFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCP 497
Query: 500 EPRT 503
+ T
Sbjct: 498 DVYT 501
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 143/293 (48%), Gaps = 21/293 (7%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMV 204
R Y P + + A++D +A+ + +V+ +M +V+ TY I+L+ A V
Sbjct: 351 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 410
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE------SEKNEFGYDIK 258
EA F +E G + + + L+ C +V A F E N Y
Sbjct: 411 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSY--- 467
Query: 259 TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK-GKLGTALRLFQA 317
NII+ G C G + +A +++ +++ + PD T+ +F++ L ++ +G + LF++
Sbjct: 468 --NIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFES 525
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M +G P++ + + ++D +C + LE+ EM +RG P+V +N+LI+ LC R
Sbjct: 526 MVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGR 585
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGC 427
++ E E+E+++ P+ ++ LL +L ++ EE + M+ GC
Sbjct: 586 VDEALEVFRELERRSA---PDAWSYWSLLDALSRCERMEEARLLSFHMKLQGC 635
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 39/241 (16%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N ILD L +A R E F M + + TY L++ + + V A+ +F R
Sbjct: 397 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 456
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCV-LGNV 273
+ G +L ++ ++ LCR + A +FE + D+ T N L+G C L V
Sbjct: 457 DRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTV 516
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+ ++ ++ P+ +Y+ ++ + + G L L +F M +G PDVV N +
Sbjct: 517 GDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTL 576
Query: 334 IDALCFKKRIPEALEVLRE----------------------------------MKNRGCL 359
I LC R+ EALEV RE MK +GC
Sbjct: 577 IRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCA 636
Query: 360 P 360
P
Sbjct: 637 P 637
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 163/367 (44%), Gaps = 17/367 (4%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
R D+SP + +N ++ L + ++V +++ P ++ TY IL+
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI---TYTILIEATMLE 241
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTM 260
V+EA+ + D G D+ + ++ +C+ V+ A E E D+ +
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISY 301
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
NI+L G E ++ + KC+P+ VTY+ + L + GK+ A+ L + M E
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KG PD + + +I A C + R+ A+E L M + GCLP++ YN+++ LCK + +
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSL----KKPEEVPWVLERMERNGCKMSTDTYNV 436
E ++ + C PN ++N + +L K + +LE M NG TYN
Sbjct: 422 ALEIFGKLGEV--GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS-NGIDPDEITYNS 478
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ D+ +M P +Y +++ G R+EDA++ M G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 497 MVPEPRT 503
P T
Sbjct: 539 CRPNETT 545
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 164/367 (44%), Gaps = 49/367 (13%)
Query: 168 RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
+A R +E+++ F + PD+ Y L+N + + +++A V DR + D +
Sbjct: 142 KAVRVMEILEKFGQ-PDVF---AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 197
Query: 228 NLLLWLCRYKHVEVA------------------------ETFFESEKNE----------- 252
++ LC +++A T E +E
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 253 -FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
D+ T N I+ G C G V A +++ EPD ++Y + AL +GK
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEG 317
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+L M+ + P+VVT + +I LC +I EA+ +L+ MK +G P+ +Y+ LI
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCK 428
C+ R++ E+L+ M + CLP+ + +N +L +L K + LE ++ GC
Sbjct: 378 FCREGRLDVAIEFLETM--ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 429 MSTDTYNVILKLYVNWDCEDKVR--HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
++ +YN + W DK+R H EM G+ PD+ +Y MI L +G +++A
Sbjct: 436 PNSSSYNTMFSAL--WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 487 SYFHEMR 493
+MR
Sbjct: 494 ELLVDMR 500
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 131/248 (52%), Gaps = 5/248 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ N ++NG+C + + +A R + PD+VTY + +L +GKL AL++
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ +P V+T +I+A + + EAL+++ EM +RG P++ TYN++I+ +CK
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
++ +E + +E K P+ I++N LL++L K EE ++ +M C +
Sbjct: 277 GMVDRAFEMVRNLELKGSE--PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY++++ ++ + + M++KG+ PD SY +I +GRL+ A+ + M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 493 RLKGMVPE 500
G +P+
Sbjct: 395 ISDGCLPD 402
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 12/222 (5%)
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
+ G +L L + M KG PDV+ C +I + IP+A+ V+ ++ G P+V
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLE 420
YN+LI CK+ R++ LD M K+ S P+ +T+N ++ SL K + VL
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFS--PDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 421 RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
++ + C+ + TY ++++ + D+ +EM +G+ PD +Y +I G+ +G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 481 RLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
++ A + LKG P+ V NI L+ QGK
Sbjct: 278 MVDRAFEMVRNLELKGSEPD------VISYNILLRALLNQGK 313
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 125/259 (48%), Gaps = 22/259 (8%)
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
GY D+ ++ G+ L N+ +A R +I++ +PD Y +N K ++ A
Sbjct: 119 GYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDA 177
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
R+ M K PD VT N +I +LC + ++ AL+VL ++ + C P V TY LI+
Sbjct: 178 TRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEA 237
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCK 428
++ + +DEM + P+ T+N +++ + K V E +E G +
Sbjct: 238 TMLEGGVDEALKLMDEMLSRGLK--PDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSE 295
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEK-------KGMGPDQRSYTVMIHGLYDKGR 481
+YN++L+ +N + WEE EK + P+ +Y+++I L G+
Sbjct: 296 PDVISYNILLRALLN-------QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348
Query: 482 LEDALSYFHEMRLKGMVPE 500
+E+A++ M+ KG+ P+
Sbjct: 349 IEEAMNLLKLMKEKGLTPD 367
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 36/266 (13%)
Query: 175 LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
+ ++F E D N TY IL+ +EEA+ + KE G D ++ L+ C
Sbjct: 321 MTKMFSEKCD-PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 235 RYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
R ++VA F E+ ++ DI N +L C G +A + + + C P+S
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
+Y T +AL G AL + M G PD +T N +I LC + + EA E+L +M
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
++ P+V TYN ++ CK R+E
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAIN------------------------------ 529
Query: 414 EVPWVLERMERNGCKMSTDTYNVILK 439
VLE M NGC+ + TY V+++
Sbjct: 530 ----VLESMVGNGCRPNETTYTVLIE 551
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 6/242 (2%)
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ G+ M I + C GN E+ + +++ PD + +
Sbjct: 79 QQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLR 138
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ A+R+ + + EK +PDV N +I+ C RI +A VL M+++ P+ TYN
Sbjct: 139 NIPKAVRVME-ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 197
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERME 423
+I LC +++ + L+++ N C P IT+ L+++ +E +++ M
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDN--CQPTVITYTILIEATMLEGGVDEALKLMDEML 255
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G K TYN I++ D+ +E KG PD SY +++ L ++G+ E
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWE 315
Query: 484 DA 485
+
Sbjct: 316 EG 317
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 31/229 (13%)
Query: 107 GEIEKALNQCELT----LTDD------LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
G+IE+A+N +L LT D LI R D A F + + +G P
Sbjct: 347 GKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD--VAIEFLETMISDGCL-PDI 403
Query: 157 NVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILL-------NRYAAAHMVEE 206
+N +L L G+A + +E+ E+ N +Y + ++ A HM+ E
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
+ G D + +++ LCR V+ A E + EF + T NI+L
Sbjct: 464 MM-------SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
G+C + +A + ++ + C P+ TY + + G A+ L
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 172/387 (44%), Gaps = 27/387 (6%)
Query: 139 AYTFFKWV------SREGDY------------SPGSNVFNAILDVLGRARRFVELIQVFD 180
AYTFF V R D +P +++ IL+ R+ F ++V +
Sbjct: 111 AYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLE 170
Query: 181 EMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
M ++ ++LN V+EA+G+ + FG D+ ++ +L LC K
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230
Query: 238 H-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
+V E E + + +I T N ++ C G + + C PD YA
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
T ++ + K+G L A + M G KP+VV N ++ LC +R EA E+L EM +
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---E 413
C + T+N L+ C+ ++ V E L++M C+P+ IT+ ++ K +
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH--GCMPDVITYTTVINGFCKEGLID 408
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
E +L+ M GCK +T +Y ++LK + +M ++G P+ ++ +I
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ L KG +E A+ +M + G P+
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPD 495
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 165/365 (45%), Gaps = 19/365 (5%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
D +P FN ++ L R F + +V +M PD+ + Y +++ +
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI---RMYATIIDGICKEGHL 302
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLC---RYKHVEVAETFFESEKNEFGYDIKTMN 261
E A + +R +G ++ + +L LC R+K E E E + + D T N
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE--ELLSEMFQKDCPLDDVTFN 360
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I+++ +C G V + ++ C PD +TY T +N K+G + A+ L ++M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G KP+ V+ ++ LC R +A E++ +M +GC PN T+N+LI LCK +E
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
E L +M NG C P+ I+++ ++ L K EE +L M G +T Y+ I
Sbjct: 481 IELLKQM-LVNG-CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+KV ++ ++ + D Y +I L + + A+ +F M G +
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM 598
Query: 499 PEPRT 503
P T
Sbjct: 599 PNEST 603
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 156/367 (42%), Gaps = 29/367 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM--------PDLVNEKTYGILLNRYAAAHMVE 205
P + F ++ L R + ++V DEM P + Y ++L +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPM-----YHVILEAACRSGGFR 163
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE------TFFESEKNEFGYDIKT 259
++ V + G D +L +C V+ A FF E DI +
Sbjct: 164 NSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEA-----DIVS 218
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N +L G C+ + + ++++ C P+ VT+ T + L + G + M
Sbjct: 219 YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS 278
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
E G PD+ IID +C + + A E+L M + G PNV YN+++K LC +R +
Sbjct: 279 EHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWK 338
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNV 436
E L EM QK+ C +++TFN L+ + + V +LE+M +GC TY
Sbjct: 339 EAEELLSEMFQKD--CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ + D+ + M G P+ SYT+++ GL GR DA +M +G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 497 MVPEPRT 503
P P T
Sbjct: 457 CPPNPVT 463
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 151/318 (47%), Gaps = 15/318 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEAI 208
P +N +L L A R+ E ++ EM P +++ T+ IL++ + +V+ I
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP--LDDVTFNILVDFFCQNGLVDRVI 376
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN--IILNG 266
+ ++ G + D+ + ++ C+ ++ A +S + G T++ I+L G
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS-MSSCGCKPNTVSYTIVLKG 435
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G +A+ +I+ C P+ VT+ T +N L KKG + A+ L + M G PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+++ + +ID L + EALE+L M N+G PN Y+S+ L + R+ V + D
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVN 443
+ K+ + + + +N ++ SL K E ++ M NGC + TY +++K +
Sbjct: 556 NI--KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 444 WDCEDKVRHTWEEMEKKG 461
+ + E+ +G
Sbjct: 614 EGLAKEAQELLSELCSRG 631
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 178/417 (42%), Gaps = 73/417 (17%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM----------PDLVNEKTYGILLNRYAAAH 202
+P FNA + L +A R ++ ++F +M PD V T+ ++L+ + A
Sbjct: 239 APNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQV---TFDVMLSGFCDAG 295
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMN 261
V+EA + D + G L + ++ L L R V E E E + T N
Sbjct: 296 FVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYN 355
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
II++G C G ++A+R I PD VTY + ++A KG + A R+ M +K
Sbjct: 356 IIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQK 415
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P+ T N ++ +L R EA +L M +G + N +I LC+ R++
Sbjct: 416 GCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVA 475
Query: 382 YEYLDEM-EQKNGS--------------------CLPNEITFNYLLKSLKK--------- 411
+ +D M E+ +G+ CLP++IT++ L+ +L K
Sbjct: 476 MDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKK 535
Query: 412 -----------PEEVPW------------------VLERMERNGCKMSTDTYNVILKLYV 442
P+ V + VL ME+ GC ST TYN++++ +
Sbjct: 536 KLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFE 595
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+++ EM++KG+ P+ +Y +I +G + A+ EM +VP
Sbjct: 596 EKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVP 652
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 127/296 (42%), Gaps = 29/296 (9%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMV 204
R G SP + ++L ++ DEM N TY +LL A
Sbjct: 378 RSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRT 437
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA----ETFFESEKNEFGY----- 255
EA + +R E G D + ++ LCR ++VA + +E G
Sbjct: 438 TEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSF 497
Query: 256 ---------------DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
D T +I+++ C G EAK+ ++I PDSV Y TF++
Sbjct: 498 LSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIH 557
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
K GK A+++ + M +KG P T N +I K + E ++++ EMK +G P
Sbjct: 558 GYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISP 617
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP 416
NV TYNSLIK C+ + LDEM Q +PN +F+ L+K+ K + P
Sbjct: 618 NVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNE--LVPNITSFDLLIKAYCKITDFP 671
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 32/254 (12%)
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK---------------GR 323
+KD++ S +PD T + AL G++ A R+F AM + GR
Sbjct: 132 LYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAMPARNEFSFGILARGYCRAGR 191
Query: 324 KPD------------VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
D +V CN ++ C + + EA ++ M+ +G PNV T+N+ I
Sbjct: 192 SIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISA 251
Query: 372 LCKIKRMETVYEYLDEMEQ--KNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNG 426
LCK R+ Y +M++ ++G P+++TF+ +L +E +++ M G
Sbjct: 252 LCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGG 311
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
++YN L V + + EM +G+ P+ +Y +++ GL +G+ DA
Sbjct: 312 FLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDAR 371
Query: 487 SYFHEMRLKGMVPE 500
+ +R M P+
Sbjct: 372 RVENFIRSGVMSPD 385
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 11/219 (5%)
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+ S P + Y + A ++ +L L++ + G +PDV T N ++ ALC R+
Sbjct: 102 LTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRM 161
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
A V M R N ++ L + C+ R + LD M N + N +
Sbjct: 162 ELAQRVFDAMPAR----NEFSFGILARGYCRAGRSIDALKVLDGMPSMN-LVVCNTVVAG 216
Query: 404 YLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME---KK 460
+ + L EE ++ERM G + T+N + +++M+ +
Sbjct: 217 FCKEGLV--EEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQH 274
Query: 461 GMG-PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
G+ PDQ ++ VM+ G D G +++A MR G +
Sbjct: 275 GLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFL 313
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 165/363 (45%), Gaps = 16/363 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAI 208
+ P N+I++ L +AR + +M D N+ TY +++ Y+ EEA
Sbjct: 147 FVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEAT 206
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNGW 267
+F G + D+ ++ + + LC++ + E AE F+ +I T I+L+G+
Sbjct: 207 KMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGY 266
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
G + F+ + + + + ++A K+G + A+ + M +G PDV
Sbjct: 267 ATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDV 326
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK----IKRMETVYE 383
T + +I ALC R+ +A++ +M G PN Y+SLI+ C +K E VYE
Sbjct: 327 FTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYE 386
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMERNGCKMSTDTYNVILKL 440
++ NG PN FN ++ S+ K V + + ++ G + +N ++
Sbjct: 387 MMN-----NGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDG 441
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
Y K + M G+GPD +Y +++G + GR++D L+ F EM K + P
Sbjct: 442 YCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPT 501
Query: 501 PRT 503
T
Sbjct: 502 TVT 504
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 147/318 (46%), Gaps = 9/318 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TYG+++N A E + F R G D +A +L LC K + A
Sbjct: 10 TYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRR 69
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK--CEPDSVTYATFVNALTKK 305
E G D + I+L C +A + + K + C PD VTY T ++ K+
Sbjct: 70 MTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKE 129
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK+G A L+ M ++G PDVVT N II+ALC + + A +LR+M + G PN TY
Sbjct: 130 GKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTY 189
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERM 422
S+I + R E + EM + +P+ +++N + SL K +E + M
Sbjct: 190 TSMIHGYSTLGRWEEATKMFREMTGR--GLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSM 247
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G + + TY ++L Y C + + M+ G+ + +T++I +G +
Sbjct: 248 AAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMM 307
Query: 483 EDALSYFHEMRLKGMVPE 500
++A+ EM+ +G+ P+
Sbjct: 308 DEAMLILSEMQGQGLSPD 325
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 158/373 (42%), Gaps = 44/373 (11%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAA-AHMVEEAI 208
SP ++ ++ L R R + + F++M N Y L+ + +V+
Sbjct: 323 SPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKE 382
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG--YDIKTMNIILNG 266
V++ +++ F +++ +C+ V A F+ K + G DI N +++G
Sbjct: 383 LVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVK-DIGERSDIIMFNTLIDG 441
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C++G + +A +I + PD+ TY T VN K G++ L LF+ M +K KP
Sbjct: 442 YCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPT 501
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VT N I+D L R A ++L EM G ++ TYN ++K LC+
Sbjct: 502 TVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCR------------ 549
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
N T +E + +++ K + T N ++
Sbjct: 550 -----------NNCT-----------DEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQR 587
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGIL 506
++ + + + G+ P+ +Y +MI L +G +E+A + F M G P R L
Sbjct: 588 REEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSR---L 644
Query: 507 VNDMNIKLKERGE 519
+ND L E+GE
Sbjct: 645 LNDTIRTLLEKGE 657
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 92/247 (37%), Gaps = 68/247 (27%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
P TY +N + + L F + G K D N ++ LC KR +A++V
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 350 L-REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
L R M GC+P+ +Y ++K LC R + + L M ++ G C P+ +T+N ++
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125
Query: 409 LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD--- 465
K ++ K + + EM ++G PD
Sbjct: 126 FFKEGKI--------------------------------GKACNLYHEMMQQGFVPDVVT 153
Query: 466 --------------------------------QRSYTVMIHGLYDKGRLEDALSYFHEMR 493
+ +YT MIHG GR E+A F EM
Sbjct: 154 HNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMT 213
Query: 494 LKGMVPE 500
+G++P+
Sbjct: 214 GRGLIPD 220
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 4/159 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P + +N ILD L RA R V ++ EM V+ TY I+L + +EAI +
Sbjct: 500 PTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVM 559
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCV 269
F + +++ ++ + + E A+ F + + + T I++
Sbjct: 560 FQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLK 619
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
G+V EA + + KS C P S + L +KG++
Sbjct: 620 EGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEI 658
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 178/403 (44%), Gaps = 41/403 (10%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTY 191
D A F + + G SP + +N +++ L +AR + + +M D L + TY
Sbjct: 231 DVNKACDLFNEMVQRG-ISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTY 289
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN 251
L+ Y++ +EA+ V + G L D+ +L+ LC++ ++ A F+S
Sbjct: 290 NSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAM 349
Query: 252 EF-GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
+ DI + I+LNG+ G + + + ++ PDS + + A K G L
Sbjct: 350 KGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDR 409
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
A +F M E+G +PDVVT + +I ALC ++ +A+E +M ++G P+++TY+ LI+
Sbjct: 410 ATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQ 469
Query: 371 HLCK----IKRMETVYEYLDEMEQKNGSCL-----------------------------P 397
C +K + V + +++ + + C P
Sbjct: 470 GFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHP 529
Query: 398 NEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N + +N L+ + K E V + M G + + Y ++ Y D+ +
Sbjct: 530 NVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLF 589
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
E+ KG+ P Y +++HGL+ GR A FHEM G+
Sbjct: 590 REILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGI 632
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 146/321 (45%), Gaps = 9/321 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TYGIL++ AH + + F + + G D NLL LC K A
Sbjct: 110 TYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHR 169
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNALTKK 305
G D+ + I+L C +A + + + + C P++V Y T ++ K+
Sbjct: 170 MPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKE 229
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G + A LF M ++G PD+ T NC+++ALC + + +A +LR+M ++G LP+ TY
Sbjct: 230 GDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTY 289
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
NSLI + + +M + LP+ +T N L+ SL K ++ V + M
Sbjct: 290 NSLIYGYSSTGQWKEAVRVSKKMTSQG--ILPDVVTLNSLMASLCKHGKIKDARDVFDSM 347
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G K +Y ++L Y C + + M G+ PD + V+I G L
Sbjct: 348 AMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGML 407
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
+ A F+EMR +G+ P+ T
Sbjct: 408 DRATIIFNEMREQGVEPDVVT 428
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 151/358 (42%), Gaps = 44/358 (12%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P S++FN ++ + +F+EM PD+V TY ++ +++
Sbjct: 388 APDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVV---TYSTVIAALCRIGKMDD 444
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILN 265
A+ F++ + G +S + L+ C + + A+ N+ DI N I+N
Sbjct: 445 AVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIIN 504
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C LG V +A+ + I P+ + Y T ++ GK+ ALR+F M G +P
Sbjct: 505 NLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQP 564
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+VV +++ C RI E L + RE+ ++G P+ T YN ++ L + R
Sbjct: 565 NVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRT------- 617
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+P ++ F+ M +G M TY+++L
Sbjct: 618 ----------VPAKVKFH-----------------EMTESGIAMDRYTYSIVLGGLFKNS 650
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
C D+ ++E+ + D + +MI G++ R+E+A F + G+VP T
Sbjct: 651 CSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVT 708
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 7/250 (2%)
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
P TY ++ T+ + L F + + G D + + ++ LC KR EAL+
Sbjct: 105 SPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALD 164
Query: 349 V-LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+ L M + GC+P+V +Y ++K LC ++ E L M + CLPN + +N ++
Sbjct: 165 ILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVID 224
Query: 408 SLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
K +V + M + G TYN ++ DK +M KG+ P
Sbjct: 225 GFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLP 284
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKV 524
D +Y +I+G G+ ++A+ +M +G++P+ T +N + L + G+
Sbjct: 285 DNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVT---LNSLMASLCKHGKIKDAR 341
Query: 525 IKLTSLGLKG 534
S+ +KG
Sbjct: 342 DVFDSMAMKG 351
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 141/309 (45%), Gaps = 6/309 (1%)
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
L N Y +++ + V +A +F+ + G DLS + ++ LC+ + ++ AE
Sbjct: 213 LPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEA 272
Query: 245 FFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALT 303
++ D T N ++ G+ G EA R K + PD VT + + +L
Sbjct: 273 ILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLC 332
Query: 304 KKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVT 363
K GK+ A +F +M KG+K D+ + +++ K + + E+ M + G P+
Sbjct: 333 KHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSH 392
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER-- 421
+N LIK K ++ +EM ++ P+ +T++ ++ +L + ++ +E+
Sbjct: 393 IFNVLIKAYAKCGMLDRATIIFNEMREQGVE--PDVVTYSTVIAALCRIGKMDDAVEKFN 450
Query: 422 -MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
M G S TY+ +++ + K + +M KGM PD + +I+ L G
Sbjct: 451 QMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLG 510
Query: 481 RLEDALSYF 489
R+ DA + F
Sbjct: 511 RVMDAQNIF 519
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 134/307 (43%), Gaps = 11/307 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P FN I++ L + R ++ +FD + N Y L++ Y +E A+ V
Sbjct: 494 PDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRV 553
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM-NIILNGWCV 269
FD G ++ + L+ C+ ++ + F ++ T+ NIIL+G
Sbjct: 554 FDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQ 613
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G AK + ++ +S D TY+ + L K A+ LF+ + K D+ T
Sbjct: 614 AGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITT 673
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I + +R+ EA ++ + G +P+V TY+ ++ +L K +E + ME
Sbjct: 674 LNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSME 733
Query: 390 QKNGSC-LPNEITFNYLLKSLKKPEEVPWV---LERMERNGCKMSTDTYNVILKLYVN-W 444
N C PN N++++ L + E+ L +++ + T +++ L+ +
Sbjct: 734 --NAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSKG 791
Query: 445 DCEDKVR 451
C + +R
Sbjct: 792 TCREHIR 798
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 139/267 (52%), Gaps = 8/267 (2%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
DI T N++LNG C G V +A F +++ EP++V+Y + L + A +L
Sbjct: 15 DIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLM 74
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ M KG P+VVT N +I LC + + A+EVL ++ GC PN +YN L+ CK
Sbjct: 75 EEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQ 134
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTD 432
K+M+ +++ M + C P+ +++N LL +L + EV +L +++ GC
Sbjct: 135 KKMDKAMAFVELMVSR--GCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLI 192
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+YN ++ + +EM KG+ PD +YT + GL + ++E+A+ F ++
Sbjct: 193 SYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKV 252
Query: 493 RLKGMVPEPRTGILVNDMNIKLKERGE 519
+ G+ P T +L N + + L +R E
Sbjct: 253 QDMGIRP---TVVLYNAILLGLCKRRE 276
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 163/337 (48%), Gaps = 23/337 (6%)
Query: 176 IQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNL 229
+++ DEM PD++ TY ++LN V++A+ + +G + ++ +
Sbjct: 1 MKLLDEMRDKGCAPDII---TYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIV 57
Query: 230 LLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
L L + E AE E ++ ++ T N++++ C G V A + I K C
Sbjct: 58 LKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGC 117
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
P+S++Y ++A K+ K+ A+ + M +G PD+V+ N ++ ALC + A++
Sbjct: 118 TPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAID 177
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+L ++K +GC P + +YN++I L K + + E LDEM K P+ IT+ +
Sbjct: 178 LLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQ--PDIITYTTIASG 235
Query: 409 L---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT----WEEMEKKG 461
L K EE +++ G + + YN IL C+ + H + M G
Sbjct: 236 LCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILL----GLCKRRETHNAIDLFSYMISNG 291
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
P++ +YT+++ GL +G +++A ++ +G+V
Sbjct: 292 CMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVV 328
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 5/216 (2%)
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
C PD +TY +N + ++G++ A+ + + G +P+ V+ N ++ L +R +A
Sbjct: 12 CAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAE 71
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
+++ EM ++GC PNV T+N LI LC+ +E E L+++ + C PN +++N LL
Sbjct: 72 KLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKY--GCTPNSLSYNPLLH 129
Query: 408 SL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
+ KK ++ +E M GC +YN +L D +++ KG P
Sbjct: 130 AFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSP 189
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
SY +I GL G+ ++AL EM KG+ P+
Sbjct: 190 VLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPD 225
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 128/263 (48%), Gaps = 12/263 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +N +L L A R+ + ++ +EM P++V T+ +L++ +VE A
Sbjct: 49 PNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV---TFNMLISFLCRRGLVEPA 105
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNG 266
+ V ++ ++G + ++ LL C+ K ++ A F E + Y DI + N +L
Sbjct: 106 MEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTA 165
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G V A + C P ++Y T ++ LTK GK AL L M KG +PD
Sbjct: 166 LCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPD 225
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
++T I LC + +I EA+ ++++ G P V YN+++ LCK + +
Sbjct: 226 IITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFS 285
Query: 387 EMEQKNGSCLPNEITFNYLLKSL 409
M NG C+PNE T+ L++ L
Sbjct: 286 YM-ISNG-CMPNESTYTILVEGL 306
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 5/191 (2%)
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++L M +KG PD++T N +++ +C + R+ +A+E L + + G PN +YN ++K
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCK 428
L +R E + ++EM K C PN +TFN L+ L + E VLE++ + GC
Sbjct: 61 LFTAERWEDAEKLMEEMAHK--GCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCT 118
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
++ +YN +L + DK E M +G PD SY ++ L G ++ A+
Sbjct: 119 PNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDL 178
Query: 489 FHEMRLKGMVP 499
H+++ KG P
Sbjct: 179 LHQLKGKGCSP 189
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 39/351 (11%)
Query: 158 VFNAILDVLGRARRFVELIQVFDE---MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
V N++L+ L + R + +++FDE + KT+ IL+ E+A+ +
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE--FGYDIKTMNIILNGWCVLGN 272
FG D+ + L+ C+ + A F+ K+ D+ T +++G+C G
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+ EA D+++ P +VT+ V+ K G++ TA + M G PDVVT
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+ID C ++ + + EM RG PN TY+ LI LC R+ E L ++ K+
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 393 GSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
+P +N ++ K +V + NVI+
Sbjct: 413 --IIPQPFMYNPVIDGFCKAGKV----------------NEANVIV-------------- 440
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
EEMEKK PD+ ++T++I G KGR+ +A+S FH+M G P+ T
Sbjct: 441 --EEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 159/351 (45%), Gaps = 24/351 (6%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV-EEAIGV 210
+ +++ R+ E + VF +M P L+ TY ++LN Y M + +G+
Sbjct: 202 AYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLI---TYNVILNVYGKMGMPWNKMVGL 258
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHV--EVAETFFESEKNEFGYDIKTMNIILNGWC 268
DR K G D + N L+ CR ++ E A E + F D T N +L+ +
Sbjct: 259 VDRMKSAGIAPDSYTY-NTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYG 317
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
EA +++ + C P VTY + ++A + G L AL L M EKG KPDV
Sbjct: 318 KSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVF 377
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK---HLCKIKRMETVYEYL 385
T ++ + A+++ EM+N GC PN+ T+N+LIK + K M V+E
Sbjct: 378 TYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFE-- 435
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYV 442
+ K C P+ +T+N LL + EV V + M+R G DT+N ++ Y
Sbjct: 436 ---DIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYS 492
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
D+ ++ M + G+ PD SY ++ L G + + EM+
Sbjct: 493 RCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMK 543
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 185/446 (41%), Gaps = 88/446 (19%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
+E A K + G +SP +NA+LDV G++RR E ++V EM P +V
Sbjct: 287 YEEAAGVLKEMKLAG-FSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIV--- 342
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY L++ YA ++E+A+ + ++ E G D+ + LL + + A FE
Sbjct: 343 TYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEM 402
Query: 250 KNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT-------------- 294
+NE +I T N ++ G E + ++DI +C PD VT
Sbjct: 403 RNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMD 462
Query: 295 ---------------------YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+ T +++ ++ G A+ +++ M E G PD+ + N +
Sbjct: 463 SEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAV 522
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL---------IKHLCKIKR------- 377
+ AL ++ +VL EMK+ C PN TY SL I+ +C +
Sbjct: 523 LAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGII 582
Query: 378 --------------------METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP- 416
MET +L E+ Q+ S P+ T N ++ + + V
Sbjct: 583 EPRAVLLKTLVLVNSKCDLLMETERAFL-ELRQRGFS--PDITTLNAMVSIYGRRQMVAK 639
Query: 417 --WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+L+ M+R G S TYN ++ +Y ++ E+ KG+ PD SY +I+
Sbjct: 640 ANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIY 699
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPE 500
GR+ DA EMR G P+
Sbjct: 700 AYCRNGRMRDASRVLSEMRESGPAPD 725
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 161/370 (43%), Gaps = 22/370 (5%)
Query: 154 PGSNVFNA---ILDVLG------------RARRFVELIQVFDEMPDLVNEKTYGILLNRY 198
PG + F+ LDVLG A R E ++ E L+N ++++
Sbjct: 116 PGESDFSVESLSLDVLGIVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISIL 175
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL-LWLCRYKHVEVAETFFESEKNEFGYDI 257
V A + + G D+ A+ +++ + ++ E F + E+ +
Sbjct: 176 GKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTL 235
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGKLGTALRLFQ 316
T N+ILN + +G + D +KS PDS TY T ++ + A + +
Sbjct: 236 ITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLK 295
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M G PD VT N ++D +R EA+EVL+EM+ GC P++ TYNSLI +
Sbjct: 296 EMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDG 355
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDT 433
+E E ++M +K P+ T+ LL +K + + E M GCK + T
Sbjct: 356 LLEDALELKNQMVEKG--IKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICT 413
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
+N ++K++ N ++ +E+++ PD ++ ++ G + F EM+
Sbjct: 414 FNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMK 473
Query: 494 LKGMVPEPRT 503
G VPE T
Sbjct: 474 RAGFVPERDT 483
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 147/335 (43%), Gaps = 32/335 (9%)
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
+ E+ G D E LD L + L YK + A FE +N K
Sbjct: 110 ELFEQQPGESDFSVESLSLDVLGIVKGLGF----YKKCDTALRVFEWVRNR-----KESE 160
Query: 262 IILNGWCVL---------GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
++LNG + G V A ++ K + D Y + + A T G+ A+
Sbjct: 161 LLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAV 220
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP--EALEVLREMKNRGCLPNVTTYNSLIK 370
+F+ M E G KP ++T N I++ K +P + + ++ MK+ G P+ TYN+LI
Sbjct: 221 MVFKKMEEVGCKPTLITYNVILNVYG-KMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLIS 279
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGC 427
+ E L EM+ S P+++T+N LL ++ +E VL+ ME NGC
Sbjct: 280 CCRRGNLYEEAAGVLKEMKLAGFS--PDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGC 337
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
S TYN ++ Y + +M +KG+ PD +YT ++ G G+ + A+
Sbjct: 338 PPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQ 397
Query: 488 YFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
F EMR +G P + N +K G +GK
Sbjct: 398 IFEEMRNEGCKPN------ICTFNALIKMHGNRGK 426
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 153/391 (39%), Gaps = 90/391 (23%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
+AA F+ + EG P FNA++ + G +F E+++VF+++ PD+V T
Sbjct: 393 KAAVQIFEEMRNEG-CKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIV---T 448
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE- 249
+ LL+ + M E GVF K G + + F L+ R + A ++
Sbjct: 449 WNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRML 508
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL------- 302
+ D+ + N +L G ++++ ++ +C+P+ +TY + ++A
Sbjct: 509 EAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIE 568
Query: 303 ----------------------------TKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+K L R F + ++G PD+ T N ++
Sbjct: 569 RMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMV 628
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL-------------------------- 368
++ + +A E+L MK G P++TTYNSL
Sbjct: 629 SIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIR 688
Query: 369 ---------IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVP 416
I C+ RM L EM + + P+ IT+N + S E
Sbjct: 689 PDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPA--PDIITYNTFIASYAADSMFVEAI 746
Query: 417 WVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
V+ M ++GCK + TYN I V+W C+
Sbjct: 747 DVVCYMIKHGCKPNQSTYNSI----VDWYCK 773
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 117/281 (41%), Gaps = 39/281 (13%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVE 205
E +P + +NA+L L R + + +V EM D NE TY LL+ YA +E
Sbjct: 509 EAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIE 568
Query: 206 EAI--------GVFDRR---------------------KEFGEL------DDLSAFQNLL 230
G+ + R + F EL D++ ++
Sbjct: 569 RMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMV 628
Query: 231 LWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
R + V A + ++ F + T N ++ + N ++ ++I+
Sbjct: 629 SIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIR 688
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD ++Y T + A + G++ A R+ M E G PD++T N I + EA++V
Sbjct: 689 PDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDV 748
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+ M GC PN +TYNS++ CK+ R + +++ + +
Sbjct: 749 VCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRK 789
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 186/448 (41%), Gaps = 79/448 (17%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGI 193
EA F + V E +P FN +++ L R +E + ++M ++ TYG
Sbjct: 209 EAVALFDQMV--EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
++N + A+ + + +E D+ + ++ LC+ H A+ F SE E
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF-SEMLEK 325
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G ++ T N +++G+C G +A+R +D+I+ + PD +T+ ++A K+GKL A
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 312 LRL-------------------------------FQAMWEKGRKPDVVTCNCIIDALCFK 340
+L + M++ PDVVT N IID C
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRA 445
Query: 341 KRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI 400
KR+ E +++LRE+ RG + N TTYN+LI C++ + + EM +G C P+ I
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM-ISHGVC-PDTI 503
Query: 401 TFNYLLKSLKKPEEVPWVLERMER------------------------------------ 424
T N LL + E++ LE E
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 425 --NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+G + TYNV++ + + +M+ G PD +Y +I G G +
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Query: 483 EDALSYFHEMRLKGMVPEPRTGILVNDM 510
+ ++ EMR G + T +V D+
Sbjct: 624 DKSIELISEMRSNGFSGDAFTIKMVADL 651
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 156/364 (42%), Gaps = 57/364 (15%)
Query: 183 PDLV--NEKTYGILL-NRYAAA-----HMVE----EAIGVFDRRKEFGELDDLSAFQNLL 230
PD+V N +G+ L +R + A +MVE EA+ +FD+ E G + F L+
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 231 LWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
LC V E A + D+ T I+NG C +G+ A + ++ +
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
PD V Y+ ++ L K G A LF M EKG P+V T NC+ID C R +A +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 350 LR-----------------------------------EMKNRGCLPNVTTYNSLIKHLCK 374
LR EM +R P+ TYNS+I CK
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMST 431
R + D M P+ +TFN ++ K+ +E +L + R G +T
Sbjct: 414 HNRFDDAKHMFDLMAS------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
TYN ++ + D + + ++EM G+ PD + ++++G + +LE+AL F
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 492 MRLK 495
+++
Sbjct: 528 IQMS 531
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 169/431 (39%), Gaps = 64/431 (14%)
Query: 130 NRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-----PD 184
+ Y + A FF ++ R + + N ++ V R R I ++ +M P
Sbjct: 81 SHYFKSLDDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIP- 138
Query: 185 LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAET 244
+N ++ IL+ + H + ++ F + + G D+ F LL LC + A
Sbjct: 139 -LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA 197
Query: 245 FFE--------------SEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKC 288
F + E G + T N ++NG C+ G V EA ++
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 289 EPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE 348
D VTY T VN + K G +AL L M E KPDVV + IID LC +A
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
+ EM +G PNV TYN +I C R L +M ++ + P+ +TFN L+ +
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN--PDVLTFNALISA 375
Query: 409 LKK--------------------PEEVPWVLERMERNGCK--------------MSTD-- 432
K P+ V + M CK S D
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTY--NSMIYGFCKHNRFDDAKHMFDLMASPDVV 433
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
T+N I+ +Y D+ E+ ++G+ + +Y +IHG + L A F EM
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 493 RLKGMVPEPRT 503
G+ P+ T
Sbjct: 494 ISHGVCPDTIT 504
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 84/224 (37%), Gaps = 39/224 (17%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
SP FN I+DV RA+R E +Q+ E+ + N TY L++ + + A
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKNEFGY-------- 255
+F G D LL C + +E A FE + + Y
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 256 ----------------------DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
D++T N++++G+C + +A + + + EPD+
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
TY T + K G++ ++ L M G D T + D +
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLI 652
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 20/205 (9%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
L A+ F M V CN +I R A+ + R+M+ R N+ ++N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNG 426
LIK C ++ ++ + P+ +TFN LL L + + E + G
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQ--PDVVTFNTLLHGLCLEDRIS---EALALFG 200
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ T + +++M + G+ P ++ +I+GL +GR+ +A
Sbjct: 201 YMVETGFLEAVA--------------LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 487 SYFHEMRLKGMVPEPRT-GILVNDM 510
+ ++M KG+ + T G +VN M
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGM 271
>gi|259490098|ref|NP_001159276.1| uncharacterized protein LOC100304366 [Zea mays]
gi|223943161|gb|ACN25664.1| unknown [Zea mays]
gi|414590092|tpg|DAA40663.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
gi|414590093|tpg|DAA40664.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
Length = 535
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 185/402 (46%), Gaps = 16/402 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILL 195
A FF VS +++ +++ +L + R F + DEM + ++ + L
Sbjct: 118 AVAFFHHVSPSLPADSLPDLYASMIVLLAKHRHFGLARHLLDEMRERAVPISRQLILALT 177
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGE-LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG 254
RY A M EA +F R +E+G D + +LL L + + A+ F+S + F
Sbjct: 178 RRYVRAEMPSEAADLFRRMEEYGAGAPDPATLASLLAALSKKRLASEAQALFDSCRTVFT 237
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ +++ WC G + EA+R + ++ +S P+ TY ++A+ + G++ A L
Sbjct: 238 PDVVLYTAVVHAWCRAGRLDEAERVFTEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQEL 297
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
M + G P+ T N I+ + R + L+V +M+ C P+V TYN LI+ C
Sbjct: 298 LCQMIDSGCPPNTTTFNAIMRSHVKAGRSEQVLQVHNQMQQLRCEPDVITYNFLIETHCG 357
Query: 375 IKR--METVYEYLDEMEQKNGSCLPNEITFN---YLLKSLKKPEEVPWVLERMERNGCKM 429
+ ++ + LD+M K C+P+ TFN LL L + E+M CK
Sbjct: 358 KGQGNLDAALKVLDKMTAKK--CVPDCHTFNPMFRLLLVLGNIGAAHKLYEKMRELQCKP 415
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ TYN +L+L+ D V ++M+ +G+ P+ +Y +I +G + A +
Sbjct: 416 NVVTYNCLLRLFNKEKSMDMVLRMKKDMDAEGIEPNMHTYAALIEAFCGRGNWKRAHTTL 475
Query: 490 HEM-RLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSL 530
EM K P + V DM + L + Q KK +L L
Sbjct: 476 KEMIEEKSFKPSKQ----VRDMVLVLLRKAGQLKKHEELVEL 513
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 147/323 (45%), Gaps = 41/323 (12%)
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
E G + + NL+ LC+ + AE++ + ++ + NII++G+C N+ +
Sbjct: 3 EAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEK 62
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A F +++ + P Y++ V + K G + A+ +F M KG +PD+V N ++
Sbjct: 63 ALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLS 122
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYN----------------------------- 366
L ++I EA E+ R M +RGC P+V TYN
Sbjct: 123 GLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSP 182
Query: 367 ------SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPW 417
+LI HLCK R++ YE ++M + G C E ++ L L++ E
Sbjct: 183 TFVTYTTLIDHLCKFTRLQQAYEVFEKMAE--GPCACTEPAYSVLFNKLQRAGKLVEASR 240
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCED-KVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
V M R M+ +TY++++ D + + EM K + PD +Y+++I+GL
Sbjct: 241 VYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGL 300
Query: 477 YDKGRLEDALSYFHEMRLKGMVP 499
R +A F EMR +G+ P
Sbjct: 301 CKARRPGEAKEMFQEMRGRGISP 323
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 163/364 (44%), Gaps = 19/364 (5%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEKTYGILLNRYAAAHMVEE 206
E P + ++N ++ L +A E MP N +Y I+++ Y A +E+
Sbjct: 3 EAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEK 62
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A+ +E G A+ +++ C+ +V A + F E DI N++L+
Sbjct: 63 ALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLS 122
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G ++EA+ ++ + C+PD VTY T + L K KL A+ L + M ++ P
Sbjct: 123 GLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSP 182
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
VT +ID LC R+ +A EV +M C Y+ L L + ++
Sbjct: 183 TFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVY 242
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKK-----PEEVPWVLERMERNGCKMSTDTYNVILKL 440
+M +KN C+ + T++ ++ L K E V E M G K++ D Y +
Sbjct: 243 SDMCRKN-VCMTDN-TYSLVVLGLSKMDGGNVEAAKLVTEMM---GKKIAPDFY--AYSI 295
Query: 441 YVNWDCEDK----VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+N C+ + + ++EM +G+ P +Y ++ GL +L+DA+ + M +G
Sbjct: 296 LINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQG 355
Query: 497 MVPE 500
+P+
Sbjct: 356 RLPD 359
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 155/366 (42%), Gaps = 10/366 (2%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMV 204
++ D SP + ++D L + R + +VF++M P E Y +L N+ A +
Sbjct: 176 KQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKL 235
Query: 205 EEAIGVFDR--RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI 262
EA V+ RK D+ + L L +VE A+ E + D +I
Sbjct: 236 VEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSI 295
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++NG C EAK ++++ P VTY T + L KL A+ L M ++G
Sbjct: 296 LINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQG 355
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
R PD + N +I C EA + ++M G + N TYN +I K + + +
Sbjct: 356 RLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAW 415
Query: 383 EYLDEMEQ-KNGSC-LPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVI 437
M+ KN PN T+ L+ SL K ++V +L M G S + V+
Sbjct: 416 MLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVL 475
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
L D ++EM + S +++ G+ +G +++A + +M G+
Sbjct: 476 LSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGI 535
Query: 498 VPEPRT 503
VP+ T
Sbjct: 536 VPDKFT 541
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 6/215 (2%)
Query: 180 DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV 239
D++P N TY IL++ VEEA + ++ G + L ++ LL L R +
Sbjct: 427 DKVP-APNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRL 485
Query: 240 EVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATF 298
+ A E + E + + + NI+L+G G+V EAK F K + + PD TY
Sbjct: 486 DDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKL 545
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
V L +GK A +L + + G++P+ ++ ALC + A E + + G
Sbjct: 546 VVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGV 605
Query: 359 LPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
+ +N+L+ C +++ +YLD +EQ+ G
Sbjct: 606 EVTLGMHNTLVTSCCLARKL----DYLDMIEQREG 636
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
M G PN YN+LI LCK + YL M Q C PN +++N ++ K
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH---CAPNVVSYNIIIDGYCKA 57
Query: 413 ---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
E+ L ME G + Y+ I++ + K + EM KG PD ++
Sbjct: 58 RNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNF 117
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
V++ GL+ ++ +A F M +G P+
Sbjct: 118 NVLLSGLWRARKIHEARELFRSMNSRGCKPD 148
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 187/423 (44%), Gaps = 35/423 (8%)
Query: 85 YPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFK 144
YP D + +N ++K + KG+++KAL+ D L+ ++ + + T
Sbjct: 125 YPPDTVTLN--TLIK--GLCLKGQVKKALH-----FHDKLLAQ---GFQLNQVSYATLIN 172
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMV 204
V + GD R ++L++ D N + Y +++ +V
Sbjct: 173 GVCKIGD-----------------TRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV 215
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAETFFESEKNEFGYDIKTMNII 263
EA G+F G D+ + L+ C K E E ++ T NI+
Sbjct: 216 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ C G V EAK ++K+ +PD +TY+T ++ ++ A +F AM G
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PDV T +I+ C K + EAL + +EM + +P + TY+SLI LCK R+ V++
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWD 395
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKL 440
+DEM + + IT++ L+ L K + + +M+ + + T+ ++L
Sbjct: 396 LIDEMRDRGQPA--DVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ ++++ KG + +Y VMI+G +G LE+AL+ +M G +P
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513
Query: 501 PRT 503
T
Sbjct: 514 AFT 516
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 146/310 (47%), Gaps = 6/310 (1%)
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNE 252
+L+ +A A+ + R + G DL L+ C + + K
Sbjct: 65 ILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ D T+N ++ G C+ G V +A F ++ + + V+YAT +N + K G A+
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 184
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+L + + + KP+V + IIDALC + + EA + EM +G +V TY++LI
Sbjct: 185 KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 244
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
C +++ L+EM K + PN T+N L+ +L K +E VL M + K
Sbjct: 245 CIEGKLKEAIGLLNEMVLKTIN--PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
TY+ ++ Y K +H + M G+ PD +YT++I+G +++AL+ F
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362
Query: 490 HEMRLKGMVP 499
EM K MVP
Sbjct: 363 KEMHQKNMVP 372
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 118/243 (48%), Gaps = 6/243 (2%)
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
NV +A + ++ + P + + +++ K TA+ L + KG +PD++T N
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I+ C +I VL ++ RG P+ T N+LIK LC +++ + D++ +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 392 NGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCED 448
N++++ L+ + K + +L +++ K + + Y+ I+ +
Sbjct: 159 GFQL--NQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS 216
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILV 507
+ + EM KG+ D +Y+ +I+G +G+L++A+ +EM LK + P T ILV
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Query: 508 NDM 510
+ +
Sbjct: 277 DAL 279
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 109/233 (46%), Gaps = 11/233 (4%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVN 187
++ + A F +S G +P + + +++ + + E + +F EM P +V
Sbjct: 318 YEVKKAQHVFNAMSLMG-VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV- 375
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
TY L++ + + + D ++ G+ D+ + +L+ LC+ H++ A F
Sbjct: 376 --TYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFN 433
Query: 248 SEKN-EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
K+ E +I T I+L+G C G + +A+ ++D++ + TY +N K+G
Sbjct: 434 KMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQG 493
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
L AL + M + G P+ T II AL K +A ++LR+M RG L
Sbjct: 494 LLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 172/387 (44%), Gaps = 27/387 (6%)
Query: 139 AYTFFKWV------SREGDY------------SPGSNVFNAILDVLGRARRFVELIQVFD 180
AYTFF V R D +P +++ IL+ R+ F ++V +
Sbjct: 111 AYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLE 170
Query: 181 EMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
M ++ ++LN V+EA+G+ + FG D+ ++ +L LC K
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230
Query: 238 H-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
+V E E + + +I T N ++ C G + + C PD YA
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
T ++ + K+G L A + M G KP+VV N ++ LC +R EA E+L EM +
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---E 413
C + T+N L+ C+ ++ V E L++M C+P+ IT+ ++ K +
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG--CMPDVITYTTVINGFCKEGLID 408
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
E +L+ M GCK +T +Y ++LK + +M ++G P+ ++ +I
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ L KG +E A+ +M + G P+
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPD 495
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 165/365 (45%), Gaps = 19/365 (5%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
D +P FN ++ L R F + +V +M PD+ + Y +++ +
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI---RMYATIIDGICKEGHL 302
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLC---RYKHVEVAETFFESEKNEFGYDIKTMN 261
E A + +R +G ++ + +L LC R+K E E E + + D T N
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE--ELLSEMFQKDCPLDDVTFN 360
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I+++ +C G V + ++ C PD +TY T +N K+G + A+ L ++M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G KP+ V+ ++ LC R +A E++ +M +GC PN T+N+LI LCK +E
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
E L +M NG C P+ I+++ ++ L K EE +L M G +T Y+ I
Sbjct: 481 IELLKQM-LVNG-CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+KV ++ ++ + D Y +I L + + A+ +F M G +
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM 598
Query: 499 PEPRT 503
P T
Sbjct: 599 PNEST 603
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 156/367 (42%), Gaps = 29/367 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM--------PDLVNEKTYGILLNRYAAAHMVE 205
P + F ++ L R + ++V DEM P + Y ++L +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPM-----YHVILEAACRSGGFR 163
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE------TFFESEKNEFGYDIKT 259
++ V + G D +L +C V+ A FF E DI +
Sbjct: 164 NSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEA-----DIVS 218
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N +L G C+ + + ++++ C P+ VT+ T + L + G + M
Sbjct: 219 YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS 278
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
E G PD+ IID +C + + A E+L M + G PNV YN+++K LC +R +
Sbjct: 279 EHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWK 338
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNV 436
E L EM QK+ C +++TFN L+ + + V +LE+M +GC TY
Sbjct: 339 EAEELLSEMFQKD--CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ + D+ + M G P+ SYT+++ GL GR DA +M +G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 497 MVPEPRT 503
P P T
Sbjct: 457 CPPNPVT 463
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 151/318 (47%), Gaps = 15/318 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEAI 208
P +N +L L A R+ E ++ EM P +++ T+ IL++ + +V+ I
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP--LDDVTFNILVDFFCQNGLVDRVI 376
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN--IILNG 266
+ ++ G + D+ + ++ C+ ++ A +S + G T++ I+L G
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS-MSSCGCKPNTVSYTIVLKG 435
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G +A+ +I+ C P+ VT+ T +N L KKG + A+ L + M G PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+++ + +ID L + EALE+L M N+G PN Y+S+ L + R+ V + D
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVN 443
+ K+ + + + +N ++ SL K E ++ M NGC + TY +++K +
Sbjct: 556 NI--KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 444 WDCEDKVRHTWEEMEKKG 461
+ + E+ +G
Sbjct: 614 EGLAKEAQELLSELCSRG 631
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 172/387 (44%), Gaps = 27/387 (6%)
Query: 139 AYTFFKWV------SREGDY------------SPGSNVFNAILDVLGRARRFVELIQVFD 180
AYTFF V R D +P +++ IL+ R+ F ++V +
Sbjct: 111 AYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLE 170
Query: 181 EMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
M ++ ++LN V+EA+G+ + FG D+ ++ +L LC K
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230
Query: 238 H-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
+V E E + + +I T N ++ C G + + C PD YA
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
T ++ + K+G L A + M G KP+VV N ++ LC +R EA E+L EM +
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---E 413
C + T+N L+ C+ ++ V E L++M C+P+ IT+ ++ K +
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG--CMPDVITYTTVINGFCKEGLID 408
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
E +L+ M GCK +T +Y ++LK + +M ++G P+ ++ +I
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ L KG +E A+ +M + G P+
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPD 495
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 165/365 (45%), Gaps = 19/365 (5%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
D +P FN ++ L R F + +V +M PD+ + Y +++ +
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI---RMYATIIDGICKEGHL 302
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLC---RYKHVEVAETFFESEKNEFGYDIKTMN 261
E A + +R +G ++ + +L LC R+K E E E + + D T N
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE--ELLSEMFQKDCPLDDVTFN 360
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I+++ +C G V + ++ C PD +TY T +N K+G + A+ L ++M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G KP+ V+ ++ LC R +A E++ +M +GC PN T+N+LI LCK +E
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
E L +M NG C P+ I+++ ++ L K EE +L M G +T Y+ I
Sbjct: 481 IELLKQM-LVNG-CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+KV ++ ++ + D Y +I L + + A+ +F M G +
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM 598
Query: 499 PEPRT 503
P T
Sbjct: 599 PNEST 603
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 156/367 (42%), Gaps = 29/367 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM--------PDLVNEKTYGILLNRYAAAHMVE 205
P + F ++ L R + ++V DEM P + Y ++L +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPM-----YHVILEAACRSGGFR 163
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE------TFFESEKNEFGYDIKT 259
++ V + G D +L +C V+ A FF E DI +
Sbjct: 164 NSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEA-----DIVS 218
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N +L G C+ + + ++++ C P+ VT+ T + L + G + M
Sbjct: 219 YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS 278
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
E G PD+ IID +C + + A E+L M + G PNV YN+++K LC +R +
Sbjct: 279 EHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWK 338
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNV 436
E L EM QK+ C +++TFN L+ + + V +LE+M +GC TY
Sbjct: 339 EAEELLSEMFQKD--CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ + D+ + M G P+ SYT+++ GL GR DA +M +G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 497 MVPEPRT 503
P P T
Sbjct: 457 CPPNPVT 463
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 151/318 (47%), Gaps = 15/318 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEAI 208
P +N +L L A R+ E ++ EM P +++ T+ IL++ + +V+ I
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP--LDDVTFNILVDFFCQNGLVDRVI 376
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN--IILNG 266
+ ++ G + D+ + ++ C+ ++ A +S + G T++ I+L G
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS-MSSCGCKPNTVSYTIVLKG 435
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G +A+ +I+ C P+ VT+ T +N L KKG + A+ L + M G PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+++ + +ID L + EALE+L M N+G PN Y+S+ L + R+ V + D
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVN 443
+ K+ + + + +N ++ SL K E ++ M NGC + TY +++K +
Sbjct: 556 NI--KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 444 WDCEDKVRHTWEEMEKKG 461
+ + E+ +G
Sbjct: 614 EGLAKEAQELLSELCSRG 631
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 185/435 (42%), Gaps = 80/435 (18%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV-- 186
++E A F W+ +EG + P ++ +++ L +A + + +++FDEM PD+
Sbjct: 164 EFEKARGFLDWMWKEG-FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCY 222
Query: 187 -------------------------------NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
N KT+ I+++ + V++ + +++R K
Sbjct: 223 NILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMK 282
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVY 274
+ DL + +L+ LC +V+ AE+ F E ++ + D+ T N +L G+C G +
Sbjct: 283 QNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIK 342
Query: 275 EAKRFWKD--------------IIKSKCE--------------------PDSVTYATFVN 300
E+ W+ +IK E D TY F++
Sbjct: 343 ESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIH 402
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L G + AL + Q + G DV IID LC KKR+ EA +++EM G
Sbjct: 403 GLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVEL 462
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPW 417
N N+LI L + R+ +L EM KNG C P +++N L+ L K E
Sbjct: 463 NSHVCNALIGGLIRDSRLGEASFFLREM-GKNG-CRPTVVSYNILICGLCKAGKFGEASA 520
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 477
++ M NG K TY+++L D W + + G+ D + ++IHGL
Sbjct: 521 FVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLC 580
Query: 478 DKGRLEDALSYFHEM 492
G+L+DA++ M
Sbjct: 581 SVGKLDDAMTVMANM 595
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 176/407 (43%), Gaps = 55/407 (13%)
Query: 138 AAYTFFKWVSREGDYSPGSNVFNAILDVLGRAR------RFVELIQV----FDEMPDLVN 187
AA+ F +R Y+ + V++ IL L R R VELI+ DE L
Sbjct: 25 AAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSV 84
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKE-FGELDDLSAFQNLLLWLCRYKH-VEVAETF 245
KTYG M ++A+ VF R +E FG + ++ LL K V+V F
Sbjct: 85 IKTYG-------KNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLF 137
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E +++T N+++ C +A+ F + K +PD +Y+T +N L K
Sbjct: 138 AYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKA 197
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL-REMKNRGCLPNVTT 364
GKL AL LF M E+G PDV N +ID +K A+E+ R +++ PNV T
Sbjct: 198 GKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKT 257
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQK-------------NGSC----------LPNE-- 399
+N +I L K R++ + + M+Q +G C + NE
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD 317
Query: 400 --------ITFNYLLKSLKKPEEVPWVLE--RMERNGCKMSTDTYNVILKLYVNWDCEDK 449
+T+N +L + ++ LE R+ + ++ +YN+++K + D+
Sbjct: 318 ERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDE 377
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
W M KG D+ +Y + IHGL G + AL E+ G
Sbjct: 378 ATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 149/330 (45%), Gaps = 50/330 (15%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N ++ L + E ++ MP ++ TYGI ++ V +A+GV +
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAE-------------------------------- 243
G D+ A+ +++ LC+ K +E A
Sbjct: 422 SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 244 --TFF--ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
+FF E KN + + NI++ G C G EA F K+++++ +PD TY+ +
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
L + K+ AL L+ + G + DV+ N +I LC ++ +A+ V+ M++R C
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 360 PNVTTYNSLIKHLCKI---KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP 416
N+ TYN+L++ K+ R ++ Y+ +M + P+ I++N ++K L V
Sbjct: 602 ANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ-----PDIISYNTIMKGLCMCRGVS 656
Query: 417 WVLERME---RNGCKMSTDTYNVILKLYVN 443
+ +E + +G + T+N++++ VN
Sbjct: 657 YAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 178/392 (45%), Gaps = 21/392 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P S F+ +++ L + + +F +M PDL+ Y L++ ++ ++E+
Sbjct: 322 PNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLL---LYNNLIDGLCTSNRLQES 378
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF-GYD--IKTMNIIL 264
G+ +E G + ++F N ++ C + +++ +K G+ IK ++
Sbjct: 379 CGLLQEMEESGI--EPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLV 436
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C G EA +F D+ + +PD V Y+ ++ L K ++ AL+LFQ + +G
Sbjct: 437 KELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYC 496
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDV+ N +I LC +RI EA +L EM+ +G +P+ TYN+LI LCK +E +
Sbjct: 497 PDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLF 556
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
L M +K PN IT++ L+ L +P++ + M R GC S+ Y +
Sbjct: 557 LSMMIEKERE--PNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGL 614
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE- 500
N ++ EME++ M PD Y +++ A EM KG P+
Sbjct: 615 SNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDL 674
Query: 501 -PRTGILVNDMNIKLKERGEQGKKVIKLTSLG 531
+ I V + +K E + L + G
Sbjct: 675 HDKNHISVRNAILKFSEDARTSSSIKNLLAKG 706
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 165/394 (41%), Gaps = 63/394 (15%)
Query: 167 GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAF 226
G+ + ELI+ +E +N+KT+ L+ + V++A+ +FD+ K+ G D+S +
Sbjct: 149 GKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLY 208
Query: 227 QNLLLWLCRYKHVEVA--------------------------------ETFFESEKNEFG 254
++ LC K V+ A FFE +
Sbjct: 209 DVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMD 268
Query: 255 YDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKC----------------EPDSVTYA 296
T+ N +LN G+V++A + I C P+S T++
Sbjct: 269 PKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFS 328
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+N L K G L A+ LF+ M G KPD++ N +ID LC R+ E+ +L+EM+
Sbjct: 329 IVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEES 388
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME-------QKNGSCLPNEITFNYLLKSL 409
G P T N + LC+ + L +M K+ + L E L K
Sbjct: 389 GIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKE-----LCKHG 443
Query: 410 KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
K+ E ++++ M G + Y+ L + D+ ++++ +G PD +Y
Sbjct: 444 KEVEACKFLVD-MAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAY 502
Query: 470 TVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++I GL R+ +A + HEM KG+VP T
Sbjct: 503 NILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVT 536
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 145/375 (38%), Gaps = 31/375 (8%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL----VNEKTYGILLNRYAAAHMVEEAI 208
SPG+ F ++ LG A VE +FD++ + N +Y LL + + ++
Sbjct: 29 SPGALGF--LIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLE 86
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC 268
+ G D +L C + A F + D +I++ +
Sbjct: 87 MRLKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWVDEYVFSILVLAFS 146
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G V +A + + + + T+ + + K+ ++ AL LF M + G PD+
Sbjct: 147 KWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDIS 206
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE- 387
+ II LC K + +AL + EMK P+V LI K + + +E + E
Sbjct: 207 LYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHED 266
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGC----------------K 428
M+ K + L +N +L SL V +L+ + C
Sbjct: 267 MDPKASTLL-----YNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVP 321
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
++ T+++++ + D + +M + G PD Y +I GL RL+++
Sbjct: 322 PNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGL 381
Query: 489 FHEMRLKGMVPEPRT 503
EM G+ P T
Sbjct: 382 LQEMEESGIEPTSFT 396
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 103/230 (44%), Gaps = 11/230 (4%)
Query: 282 DIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR-KPDVVTCNCIIDALCFK 340
D++ S+C + L G + A LF + + G P+ + C+++ L K
Sbjct: 20 DVVNSRCLMSPGALGFLIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLS-K 78
Query: 341 KRIPEALEV-LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ LE+ L+EM + G + T +++ C + + + +E+ + +E
Sbjct: 79 SICIDLLEMRLKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWV---DE 135
Query: 400 ITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
F+ L+ + K ++ ++E ME +++ T+ ++ +V DK H +++
Sbjct: 136 YVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDK 195
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGIL 506
M+K G PD Y V+I GL ++ AL + EM KG +P I+
Sbjct: 196 MKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEM--KGFKIQPDVKIV 243
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 178/392 (45%), Gaps = 26/392 (6%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM 182
+L+V ++ R A +S E +YS + IL R ++ I +F++M
Sbjct: 178 ELMVRILGR-ESQHSVALRLLDEISVE-EYSLDVRAWTTILHAYSRIGKYERAITMFEKM 235
Query: 183 ------PDLVNEKTYGILLNRYA-AAHMVEEAIGVFDRRKEFG-ELDDLSAFQNLLLWLC 234
P LV TY ++L+ Y + +G+ D + G E D+ + ++
Sbjct: 236 RKTGLSPTLV---TYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTC-STVISACG 291
Query: 235 RYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
R ++ A FF K+E GY T N +L + G EA K++ K+ C PD
Sbjct: 292 REGLLDEARKFFARLKSE-GYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDL 350
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
VTY V A + G M KG P+ +T +I+A + +AL R+
Sbjct: 351 VTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQ 410
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL-----K 407
MK GC+PNV TYN+++ L K R+E + + L +M ++ C PN +T+N +L K
Sbjct: 411 MKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM--RSNGCAPNSVTWNTMLAMCGNK 468
Query: 408 SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+ K V V M+ G + + DT+N ++ Y + V +EEM K G P
Sbjct: 469 GMHK--YVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVT 526
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+Y +++ L +G E A S +M+ KG P
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKP 558
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 176/358 (49%), Gaps = 22/358 (6%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR-ARRFVELIQVFDEMPD---LVNEKTY 191
+E A T F+ + + G SP +N +LDV G+ R + +++ + DEM +E T
Sbjct: 225 YERAITMFEKMRKTG-LSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTC 283
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK-HVEVAETFFESEK 250
+++ +++EA F R K G + + +LL + + E E EK
Sbjct: 284 STVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEK 343
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
N D+ T N ++ + G E F +I+ P+++TY T +NA K GK
Sbjct: 344 NNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDK 403
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
AL F+ M E G P+V T N I+ L K R+ E +++L +M++ GC PN T+N+++
Sbjct: 404 ALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLA 463
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCL--PNEITFNYLLKSLKKPE---EVPWVLERMERN 425
+C K M ++Y++ + ++ SC PN TFN L+ + + +V + E M +
Sbjct: 464 -MCGNKGM---HKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKA 519
Query: 426 GCKMSTDTYNVILKLYV---NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
G TYN +L +W+ + V +M+ KG P++ SY++M++ Y KG
Sbjct: 520 GFTPCVTTYNALLNALARRGDWEAAESV---ILDMKSKGFKPNETSYSLMLN-CYAKG 573
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 6/256 (2%)
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK-LGT 310
E+ D++ IL+ + +G A ++ + K+ P VTY ++ K G+
Sbjct: 204 EYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNK 263
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
L L M G + D TC+ +I A + + EA + +K+ G + TYNSL++
Sbjct: 264 ILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQ 323
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGC 427
K L EME+ N C P+ +T+N L+ + + EE ++ M R G
Sbjct: 324 VFGKAGIYSEALSILKEMEKNN--CPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGI 381
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ TY ++ Y EDK + +M++ G P+ +Y ++ L K RLE+ +
Sbjct: 382 MPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMID 441
Query: 488 YFHEMRLKGMVPEPRT 503
+MR G P T
Sbjct: 442 MLCDMRSNGCAPNSVT 457
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 176/444 (39%), Gaps = 88/444 (19%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV---- 186
+ A FF + EG Y G+ +N++L V G+A + E + + EM PDLV
Sbjct: 297 DEARKFFARLKSEG-YVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNE 355
Query: 187 ----------------------------NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
N TY ++N Y A ++A+ F + KE G
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESG 415
Query: 219 ELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
+ ++ + +L L + +E + + + N + T N +L G
Sbjct: 416 CVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVN 475
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
R ++++ EP+ T+ + A + G +++++ M + G P V T N +++AL
Sbjct: 476 RVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNAL 535
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
+ A V+ +MK++G PN T+Y+ ++ K + E ++E E NG P
Sbjct: 536 ARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGI-EKIEE-EIYNGHIFP 593
Query: 398 N--------------------EITFNYLLKSLKKPEEVPW------------------VL 419
+ E F K KP+ V + +L
Sbjct: 594 SWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEML 653
Query: 420 ERMERNGCKMSTDTYNVILKLYVN----WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
+ +G + TYN ++ +Y W E+ ++ ++K G PD SY +I G
Sbjct: 654 RLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKG----IQKSGGKPDLVSYNTVIKG 709
Query: 476 LYDKGRLEDALSYFHEMRLKGMVP 499
+G +++A+ EM + G+ P
Sbjct: 710 FCRQGLMQEAIRTLSEMTISGIRP 733
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 18/295 (6%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
I+ C T + ++N + R R DWEAA + + +G + P ++ +L+ +
Sbjct: 517 IKAGFTPC--VTTYNALLNALAR-RGDWEAAESVILDMKSKG-FKPNETSYSLMLNCYAK 572
Query: 169 AR--RFVELIQVFDEMPDLVNEKTYG--ILLNRYAAAHMVEEAIGVFDRR-KEF---GEL 220
R +E I+ ++ N + ILL A+ A+ +R +EF G
Sbjct: 573 GGNGRGIEKIE-----EEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYK 627
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
DL F ++L + K + A ++ D+ T N +++ + G ++ +
Sbjct: 628 PDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEI 687
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K I KS +PD V+Y T + ++G + A+R M G +P +VT N +
Sbjct: 688 LKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSG 747
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
K E EV+ M C PN TY ++ CK K+ + +++ + + + S
Sbjct: 748 KGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEMDKS 802
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 10/182 (5%)
Query: 152 YSPGSNVFNAILDVLG------RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVE 205
Y P +FN++L + RA + LI+ PDLV TY L++ YA
Sbjct: 626 YKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLV---TYNSLMDMYARGGECW 682
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIIL 264
+ + ++ G DL ++ ++ CR + E T E + I T N +
Sbjct: 683 KGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFV 742
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G+ G E + +I+ C P+ +TY V+ K K A+ + E +
Sbjct: 743 AGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEMDKS 802
Query: 325 PD 326
D
Sbjct: 803 FD 804
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 168/364 (46%), Gaps = 22/364 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMVEEAIGVF 211
P ++N++L A R E + +D M + N +Y I+L MV++A ++
Sbjct: 333 PDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLW 392
Query: 212 DRRKEFGELD-DLSAFQNLLLWLCRY----KHVEVAETFFESEK--NEFGYDIKTMNIIL 264
+ ++ L D+ F ++ LC K +++ E S K +EF Y + ++
Sbjct: 393 ELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSY-----SSMI 447
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G C G + +A + ++ I +P+S Y +N + K A+R++ M E
Sbjct: 448 SGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCS 507
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P +T N +I LC ++ EA REM +GC+ +V TY SLI+ LC+ K+++
Sbjct: 508 PTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALAL 567
Query: 385 LDEMEQKNGSCLPNEITFNYLLK----SLKKPEEVPWVLERM-ERNGCKMSTDTYNVILK 439
+++ K L ++ + +L S K +E +L M E+N C + TYN ++
Sbjct: 568 WNQILDKG---LQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMD 624
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ C DK W + + G+ PD SY I GL R + + +EM G++P
Sbjct: 625 GFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIP 684
Query: 500 EPRT 503
T
Sbjct: 685 TAIT 688
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 162/377 (42%), Gaps = 18/377 (4%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD-------LVNEK 189
+AA F+ + +PG NA+LD RARRF + F + N +
Sbjct: 101 DAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQ 160
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ES 248
TY I+L ++ A+ +FD + G D + L+ + ++ A E
Sbjct: 161 TYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEM 220
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK-CEPDSVTYATFVNALTKKGK 307
E D N +L G G +A R W+ +++ P+ TY ++ L K G
Sbjct: 221 PSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGM 280
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
A +++ M +PD++T +I LC + A V EM G +P+V YNS
Sbjct: 281 FKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNS 340
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMER 424
L+K C R+ +++ D M S + N ++N +LK L ++ + E +E+
Sbjct: 341 LLKGFCHAGRVGEAWKFWDSMSV---SGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEK 397
Query: 425 NGCKMSTD--TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+ +S D T++ ++ +K EE G D+ SY+ MI GL GRL
Sbjct: 398 DD-SLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRL 456
Query: 483 EDALSYFHEMRLKGMVP 499
+DA+ + ++ + P
Sbjct: 457 DDAVKLYEKISMDSFKP 473
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 175/412 (42%), Gaps = 51/412 (12%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
++E A ++ + R+ SP +N +LD L + F E V++ M PD++
Sbjct: 244 EFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMI-- 301
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TYG +++ + V+ A V+ + G + D+ + +LL C V A F++S
Sbjct: 302 -TYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDS 360
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS-KCEPDSVTYATFVNALTKKGK 307
++ + NI+L G G V +A W+ + K PD VT++T ++ L +KG
Sbjct: 361 MSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGF 420
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+L++ + G++ D + + +I LC R+ +A+++ ++ PN YN+
Sbjct: 421 ANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNA 480
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMER 424
LI C+ + +M + + C P IT+N L+ L K E E M
Sbjct: 481 LINGFCQASKFSDAIRVYSQMAEND--CSPTTITYNTLIHGLCKAEKYLEASRFTREMLE 538
Query: 425 NGCKMSTDTYNVILK-------------------------------LYVNWDCE----DK 449
GC + +TY +++ + ++ C D+
Sbjct: 539 KGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDE 598
Query: 450 VRHTWEEM-EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
EM EK P+ +Y ++ G Y+ G + A S + + G+VP+
Sbjct: 599 ASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPD 650
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 10/221 (4%)
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK--GRK--PDVVTCNCIIDALCFKKRI 343
C P ++ ++A + + A F ++ GR+ P++ T N ++ +LC + +
Sbjct: 116 CNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDL 175
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
A+ + ++ RG P+ TY++L+ K R++ LDEM P+ + +N
Sbjct: 176 DRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQ--PDAVCYN 233
Query: 404 YLLKSLKKP---EEVPWVLERMERN-GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
LL + E+ V E++ R+ G + TYNV+L + WE M
Sbjct: 234 ALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVA 293
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
PD +Y MIHGL ++ A + EM G+VP+
Sbjct: 294 NNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPD 334
>gi|224138618|ref|XP_002322859.1| predicted protein [Populus trichocarpa]
gi|222867489|gb|EEF04620.1| predicted protein [Populus trichocarpa]
Length = 502
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 195/435 (44%), Gaps = 35/435 (8%)
Query: 83 QRYPGDEIAINVQNILKTCSV------STKGEIEKALNQCELTLTDDLIVNVINRYRFDW 136
Q YP +N ++L+ C+V S+ ++ L+ + LT + + V N++ W
Sbjct: 26 QTYPSSPSPVNEDHLLRVCTVLFQQQDSSDFKLRNKLSSIDFNLTHEFFLQVCNKFPASW 85
Query: 137 EAAYTFFKWVSRE--GDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYG 192
+ FF++ + ++ S N +LD+ GR+R L EM LVN+KT+
Sbjct: 86 RPVHRFFQYTQQMPCSRFTHTSVSLNKMLDIFGRSRNLDLLWGAVQEMAKRGLVNDKTFI 145
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE 252
I+L A+A +++ F E G + ++ LC+ K VE A+ K+
Sbjct: 146 IVLKALASARELKKCAEFFHFMNEHGCEYRVERLNKVVENLCKGKLVEEAKFVVLKLKDW 205
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D T ++ G+C +G + EA + W ++ EP+ + + L K+ + AL
Sbjct: 206 IRPDGVTYGWLVKGFCDVGELIEASKIWNLMVDESIEPEIEVFEKMMETLFKRNEYDEAL 265
Query: 313 RLFQAMWEKGRKPDVV--TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
++FQ M R D+ T +ID +C K ++ +A V EM+ RG + +T SL+
Sbjct: 266 KVFQTM-RVNRMDDLALSTYRLVIDWMCRKGKVVQAQMVFDEMRQRGIQADNSTLGSLVY 324
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGC 427
L R ++ ++ +E+ + S ++ L+K L ++ E V M GC
Sbjct: 325 GLLTRGRHAEAHKVVERIEKTDIS------VYHGLIKGLVRSRRASEATQVFREMINRGC 378
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ + TY ++L+ ++ + +KG P ++ + GL G+ +A
Sbjct: 379 EPTMHTYIMLLQGHLG------------KRGRKGPDPLVNFESIFVGGLIKAGKSLEATK 426
Query: 488 YFHEMRLKGMVPEPR 502
Y E +KG + PR
Sbjct: 427 YV-ERTMKGSLEVPR 440
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 182/444 (40%), Gaps = 82/444 (18%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A+ +S +G P +NAI++ L + +++ V DEM PD T
Sbjct: 149 EEAFELMDSMSGKG-LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD---TAT 204
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y ILL + +A +FD G + DL +F L+ L + ++ A +F K
Sbjct: 205 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 264
Query: 251 N----------------------------------EFG--YDIKTMNIILNGWCVLGNVY 274
N E G D+ T N ILNG C +
Sbjct: 265 NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLS 324
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
EA + ++ + PD T+ T +N +K G + A+ LF+ M ++ KPDVVT N +I
Sbjct: 325 EADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLI 384
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN-- 392
D C + + E+ +M +R PN +Y LI C + + + DEM +K
Sbjct: 385 DGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE 444
Query: 393 -----------GSC--------------------LPNEITFNYLLKSLKKPEEVP---WV 418
G C +P+ IT+N L+ K E + +
Sbjct: 445 ATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFAL 504
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+ +ME +G TYNVIL + + +M ++G+ PD+ +YT +I+G
Sbjct: 505 VNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVT 564
Query: 479 KGRLEDALSYFHEMRLKGMVPEPR 502
+ L++A EM +G VP+ +
Sbjct: 565 QNNLKEAFRVHDEMLQRGFVPDDK 588
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 155/360 (43%), Gaps = 49/360 (13%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
N + +L+ Y A + E F K G ++A +LL L + V++A E +
Sbjct: 26 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E ++ ++ T+NI++N C + K F D+ + PD VTY T +NA ++
Sbjct: 86 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G L A L +M KG KP V T N II+ LC + A VL EM G P+ TY
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK-------------- 411
N L+ C+ M DEM + +P+ ++F+ L+ L K
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQ--GVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 263
Query: 412 ------PEEVPWVL------------------ERMERNGCKMSTDTYNVILKLYVNWDCE 447
P+ V + + + M GC + TYN IL N C+
Sbjct: 264 KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTIL----NGLCK 319
Query: 448 DKV----RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+K+ + EM ++G+ PD ++T +I+G G + A++ F M + + P+ T
Sbjct: 320 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 379
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 5/218 (2%)
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
C + + + V + KL F+ + KG + CN ++ L +
Sbjct: 21 GNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDL 80
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A E+ +E+ G NV T N +I LCK +++E +L +ME+K P+ +T+N L
Sbjct: 81 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK--GVFPDVVTYNTL 138
Query: 406 LKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ + + EE +++ M G K TYN I+ + + +EM K GM
Sbjct: 139 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 198
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
PD +Y +++ + DA F EM +G+VP+
Sbjct: 199 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 236
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 7/240 (2%)
Query: 128 VINRYRFD--WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD- 184
+IN Y D A T F+ + + + P +N ++D + ++ +++++M
Sbjct: 348 LINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 406
Query: 185 --LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
N +YGIL+N Y V EA ++D E G + ++ CR + A
Sbjct: 407 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 466
Query: 243 ETFFESEK-NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ F + D T N ++NG+ N+ A + S PD +TY +N
Sbjct: 467 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 526
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+++G++ A + M E+G PD T +I+ + + EA V EM RG +P+
Sbjct: 527 FSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 184/409 (44%), Gaps = 28/409 (6%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARR----FVELIQVFD 180
+++ + ++ WEA VSR+G S S VF AIL+ G R F LI +
Sbjct: 25 MIHFLCTHQMLWEAKSLIQVVVSRKGKGS-ASAVFAAILETKGTQRSDIYVFSGLITAYL 83
Query: 181 E---MPD------LVNEKTYGILLN--RYAAAHMVEEAI-----GVFDRRKEFGELDDLS 224
E + D L E + + + R H+++ G + E G L
Sbjct: 84 ESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLY 143
Query: 225 AFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
F L+ C+ + VA++ F++ K + + N ++NG+ LG++ E R +
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+ S +PD TY+ +N L K+ K+ A LF M KG P+ V +ID C R+
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRV 263
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
A+E+ ++M ++ LP++ TYN+LI LCK ++ V+ +DEM K P++IT+
Sbjct: 264 DLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLK--PDKITYT 321
Query: 404 YLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
L+ K ++ E +M + ++ Y ++ EM
Sbjct: 322 TLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNV 381
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVN 508
G+ PD R+YT++I+ KG + EM+ G VP T +L+N
Sbjct: 382 GLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 172/387 (44%), Gaps = 27/387 (6%)
Query: 139 AYTFFKWV------SREGDY------------SPGSNVFNAILDVLGRARRFVELIQVFD 180
AYTFF V R D +P +++ IL+ R+ F ++V +
Sbjct: 111 AYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLE 170
Query: 181 EMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
M ++ ++LN V+EA+G+ + FG D+ ++ +L LC K
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230
Query: 238 H-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
+V E E + + +I T N ++ C G + + C PD YA
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
T ++ + K+G L A + M G KP+VV N ++ LC +R EA E+L EM +
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---E 413
C + T+N L+ C+ ++ V E L++M C+P+ IT+ ++ K +
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG--CMPDVITYTTVINGFCKEGLID 408
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
E +L+ M GCK +T +Y ++LK + +M ++G P+ ++ +I
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ L KG +E A+ +M + G P+
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPD 495
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 165/365 (45%), Gaps = 19/365 (5%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
D +P FN ++ L R F + +V +M PD+ + Y +++ +
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI---RMYATIIDGICKEGHL 302
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLC---RYKHVEVAETFFESEKNEFGYDIKTMN 261
E A + +R +G ++ + +L LC R+K E E E + + D T N
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE--ELLSEMFQKDCPLDDVTFN 360
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
I+++ +C G V + ++ C PD +TY T +N K+G + A+ L ++M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G KP+ V+ ++ LC R +A E++ +M +GC PN T+N+LI LCK +E
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
E L +M NG C P+ I+++ ++ L K EE +L M G +T Y+ I
Sbjct: 481 IELLKQM-LVNG-CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+KV ++ ++ + D Y +I L + + A+ +F M G +
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM 598
Query: 499 PEPRT 503
P T
Sbjct: 599 PNEST 603
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 156/367 (42%), Gaps = 29/367 (7%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM--------PDLVNEKTYGILLNRYAAAHMVE 205
P + F ++ L R + ++V DEM P + Y ++L +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPM-----YHVILEAACRSGGFR 163
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE------TFFESEKNEFGYDIKT 259
++ V + G D +L +C V+ A FF E DI +
Sbjct: 164 NSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEA-----DIVS 218
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
N +L G C+ + + ++++ C P+ VT+ T + L + G + M
Sbjct: 219 YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS 278
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
E G PD+ IID +C + + A E+L M + G PNV YN+++K LC +R +
Sbjct: 279 EHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWK 338
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNV 436
E L EM QK+ C +++TFN L+ + + V +LE+M +GC TY
Sbjct: 339 EAEELLSEMFQKD--CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
++ + D+ + M G P+ SYT+++ GL GR DA +M +G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 497 MVPEPRT 503
P P T
Sbjct: 457 CPPNPVT 463
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 151/318 (47%), Gaps = 15/318 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM-----PDLVNEKTYGILLNRYAAAHMVEEAI 208
P +N +L L A R+ E ++ EM P +++ T+ IL++ + +V+ I
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP--LDDVTFNILVDFFCQNGLVDRVI 376
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN--IILNG 266
+ ++ G + D+ + ++ C+ ++ A +S + G T++ I+L G
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS-MSSCGCKPNTVSYTIVLKG 435
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
C G +A+ +I+ C P+ VT+ T +N L KKG + A+ L + M G PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+++ + +ID L + EALE+L M N+G PN Y+S+ L + R+ V + D
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVN 443
+ K+ + + + +N ++ SL K E ++ M NGC + TY +++K +
Sbjct: 556 NI--KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 444 WDCEDKVRHTWEEMEKKG 461
+ + E+ +G
Sbjct: 614 EGLAKEAQELLSELCSRG 631
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 201/432 (46%), Gaps = 51/432 (11%)
Query: 123 DLIVNV-INRYR-FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
DL+++V ++R + A F++++ +G + P +L L +A + VF+
Sbjct: 178 DLLIHVYCTQFRNVGFRNAIGVFRFLANKGVF-PTVKTCTFLLSSLVKANELEKSYWVFE 236
Query: 181 EMPDLVNEKTY--GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
M V+ Y +N + VE+AI +F ++ G ++ + NL+ LC++ +
Sbjct: 237 TMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGN 296
Query: 239 VEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
++ A F E K+ + T ++++NG L EA K+ ++ P+ V Y T
Sbjct: 297 LDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNT 356
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
++ K G LG ALR+ M KG P+ VT N II C ++ +A +L EM +RG
Sbjct: 357 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 416
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN-------------GSCL-------- 396
N + ++I LC R E+ +L EM +N G C
Sbjct: 417 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 476
Query: 397 ------------PNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLY 441
N +T N L+ L K +E +L++M G + TYN +
Sbjct: 477 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL---- 532
Query: 442 VNWDC-EDKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
++ C E KV ++ EM K+G+ PD +Y ++IHG+ G+L++A++ ++E + + +
Sbjct: 533 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 592
Query: 498 VPEPRT-GILVN 508
VP T G++++
Sbjct: 593 VPNVYTYGVMID 604
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 144/312 (46%), Gaps = 37/312 (11%)
Query: 229 LLLWLCR-YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
L+ LC+ KH + E +F + FG ++ T N +++G C GN+ EA R K +++
Sbjct: 462 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 521
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
D +TY T ++ K+GK+ +L M ++G +PD T N +I +C ++ EA+
Sbjct: 522 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 581
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRME------------------TVYEYLDEME 389
+ E K+R +PNV TY +I CK ++E VY L
Sbjct: 582 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 641
Query: 390 QKNGSCL---------------PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMST 431
+NG+ + P T++ L+ + + E+ +++ M + G +
Sbjct: 642 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 701
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
Y ++ Y DKV + +EM + P++ +YTVMI G G ++ A HE
Sbjct: 702 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 761
Query: 492 MRLKGMVPEPRT 503
M KG+VP+ T
Sbjct: 762 MVGKGIVPDTVT 773
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 158/334 (47%), Gaps = 19/334 (5%)
Query: 155 GSNVF--NAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIG 209
G+N+ NA++ L + E +++ +M + ++++ TY L++ VEE
Sbjct: 488 GANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFK 547
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWC 268
+ + G D + L+ +CR ++ A + E + + ++ T ++++G+C
Sbjct: 548 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 607
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+ E ++ + +++ E +SV Y T + A + G A +L M KG P
Sbjct: 608 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 667
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T + +I +C R+ +A ++ EM+ G LPNV Y +LI CK+ +M+ V L EM
Sbjct: 668 TYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 727
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWD 445
+ PN+IT+ ++ K ++ +L M G T TYNV+ N
Sbjct: 728 SSYD--IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVL----TNGF 781
Query: 446 C-EDKVRHTW---EEMEKKGMGPDQRSYTVMIHG 475
C E K+ + + M ++G+ D+ +YT ++HG
Sbjct: 782 CKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 10/318 (3%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
N T L++ ++EA+ + + E G + D + L+ C+ VE E F
Sbjct: 489 ANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE--EGF 546
Query: 246 ---FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
E K D T N++++G C +G + EA W + P+ TY ++
Sbjct: 547 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 606
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K K+ +LF + + + + V N +I A C EA ++ +M+++G P
Sbjct: 607 CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTT 666
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVL 419
TY+SLI +C I RME +DEM ++ LPN + + L+ L + ++V VL
Sbjct: 667 ATYSSLIHGMCNIGRMEDAKCLIDEMRKE--GLLPNVVCYTALIGGYCKLGQMDKVVNVL 724
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+ M + TY V++ Y EM KG+ PD +Y V+ +G +
Sbjct: 725 QEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 784
Query: 480 GRLEDALSYFHEMRLKGM 497
G++E+ M +G+
Sbjct: 785 GKIEEGFKICDYMSQEGL 802
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 164/381 (43%), Gaps = 40/381 (10%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
++ +++ L + +F E V E + NE Y L++ Y + +A+ +
Sbjct: 319 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 378
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVY 274
G + +++ C+ +E AE E + F + I++ C+
Sbjct: 379 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 438
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
A RF ++++ P+ T V L K+GK A+ L+ + EKG ++VT N +I
Sbjct: 439 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 498
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK--- 391
LC + EA+ +L++M RG + + TYN+LI CK ++E ++ EM ++
Sbjct: 499 HGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 558
Query: 392 ----------NGSC--------------------LPNEITFNYLLKS---LKKPEEVPWV 418
+G C +PN T+ ++ K EE +
Sbjct: 559 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 618
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+ ++++ YN +++ Y + ++M KG+ P +Y+ +IHG+ +
Sbjct: 619 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN 678
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
GR+EDA EMR +G++P
Sbjct: 679 IGRMEDAKCLIDEMRKEGLLP 699
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 125/268 (46%), Gaps = 10/268 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMP--DLV-NEKTYGILLNRYAAAHMVEEAIGV 210
P + +N ++ + R + E + +++E DLV N TYG++++ Y A +EE +
Sbjct: 559 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 618
Query: 211 F-DRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWC 268
F + + EL+ + + L+ CR + VE + + T + +++G C
Sbjct: 619 FTELLTQNLELNSV-VYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMC 677
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+G + +AK ++ K P+ V Y + K G++ + + Q M P+ +
Sbjct: 678 NIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI 737
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +ID + A ++L EM +G +P+ TYN L CK ++E ++ D M
Sbjct: 738 TYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYM 797
Query: 389 EQKNGSCLP-NEITFNYLLKSLKKPEEV 415
Q+ LP +EIT+ L+ ++P +
Sbjct: 798 SQEG---LPLDEITYTTLVHGWQQPSAL 822
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 176/367 (47%), Gaps = 9/367 (2%)
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT---YGILLNRYAAAHMVEEAIGVFD 212
S +NA++ R E ++ ++M T Y IL++ VE+A+ + +
Sbjct: 323 SYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIE 382
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLG 271
+ L + +L LC+ E++ + F + E + +D+ + N ++NG+ +
Sbjct: 383 EMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQR 442
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
++ A + ++ + P+S T+ ++ K+ +L AL +F M + G + ++ TCN
Sbjct: 443 DMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCN 502
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+ D + EAL+++ E+++ G +PN TYN +IK LCK ++ E +E L M +
Sbjct: 503 IMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKN 562
Query: 392 NGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
N P I +N L+ K P + + +M + G S TY +++ ++ N
Sbjct: 563 N--VFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQ 620
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVN 508
+ + ++EM KKG+ PD+ +T +I G G ++ A + + EM G P T +
Sbjct: 621 EAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLI 680
Query: 509 DMNIKLK 515
D K+K
Sbjct: 681 DGYFKIK 687
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 173/400 (43%), Gaps = 53/400 (13%)
Query: 151 DYSPGSNVFNAILDV-------LGRARRFVELIQVFDEM------PDLVNEKTYGILLNR 197
D P NVF + + G+ V+ +V +EM P +V TYG ++
Sbjct: 241 DSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVV---TYGAYIHG 297
Query: 198 YAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYD 256
A VE A+ + + + + + ++ CR + A E ++
Sbjct: 298 LCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPT 357
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ +I+++G C G V +A +++++S +P VTY++ + L K G +L +F
Sbjct: 358 AYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFH 417
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
+ +G K DV++ N +I+ ++ + A +++ EM+ G +PN T+N LI CK +
Sbjct: 418 NLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQ 477
Query: 377 RMETVYEYLDEM---------------------------------EQKNGSCLPNEITFN 403
R++ E M E ++ +PN T+N
Sbjct: 478 RLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYN 537
Query: 404 YLLKSLKKPE--EVPW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
++K L K + E W VL M +N YN ++ Y K + +M K
Sbjct: 538 IVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKV 597
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
G+ P +YT++I+ ++ ++++A F EM KG+VP+
Sbjct: 598 GIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPD 637
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 133/323 (41%), Gaps = 38/323 (11%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P S FN ++ + +R + ++VF M + +N T I+ + + EA+ +
Sbjct: 461 PNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKL 520
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCV 269
+ ++ G + + + ++ WLC+ + E A E KN N +++G+
Sbjct: 521 INEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAK 580
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
N +A + ++K P VTY +N + + K+ A LF+ M +KG PD +
Sbjct: 581 QSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEII 640
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
CII C + A + EM G PNV TY LI KIKRM
Sbjct: 641 FTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRM----------- 689
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
++ ++ +M+R+ TY ++ Y + D+
Sbjct: 690 -----------------------DKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDR 726
Query: 450 VRHTWEEMEKKGMGPDQRSYTVM 472
VR + EM++ G+ P+ +Y +
Sbjct: 727 VREMFNEMKENGVFPNYTAYATL 749
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 194/486 (39%), Gaps = 55/486 (11%)
Query: 48 IINLQARN--------SEFLFLGRIETAQLVHSLANSDEKSEFQ-RYPGDEIAINVQNIL 98
I+NLQ RN S ++L + + L+ S+ S E+ + Y G + +
Sbjct: 5 IVNLQKRNRGINRFCLSSTIYLLK---SSLLRSIIISRERYRLEAHYSGVSALLLEDQVY 61
Query: 99 KTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYR-FDWEAAY--TFFKWVSREGDYSPG 155
V+ EKA L V+ ++ +W+ A FFK VS G +S
Sbjct: 62 DYIPVTDSNRFEKARKPNSCPRKRGLFPFVLTVFKTLNWKLATHTNFFKAVSFHG-FSHS 120
Query: 156 SNVFNAILDVLGRARRFVELIQVFDEMPDLVN---------EKTYGILLNRYAAAHMVEE 206
F I+ VL A +E +Q+F + D+++ + + LL+ AHM
Sbjct: 121 IYAFKIIIHVLASAGLQME-VQIF--LRDIISYYKEVNLDVSELFSTLLDSPQDAHMGGS 177
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNG 266
I K F E N+L V+ A+ F ++ + +I + N +LN
Sbjct: 178 IIVANVLIKVFAE-------NNML--------VDAADVFVQARRFGLELNILSCNFLLNC 222
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA------MWE 320
+ + ++++ S P+ TY +N KG G + + +A M
Sbjct: 223 FAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYC-KGSFGKNIDIVKATEVLEEMEM 281
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G P VVT I LC + AL ++R+++ R N YN++I C+ +
Sbjct: 282 NGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHE 341
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVI 437
+E L++M S P +++ L+ L K +V L E M ++ K S TY+ +
Sbjct: 342 AFELLEDMRSHGIS--PTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSL 399
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
+ + + +G D SY +I+G + + A HEMR+ G
Sbjct: 400 FDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGS 459
Query: 498 VPEPRT 503
VP T
Sbjct: 460 VPNSFT 465
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 133/314 (42%), Gaps = 6/314 (1%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
+Y L+N + + A + + G + + F L+ C+ + ++ A E F
Sbjct: 430 SYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIM 489
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
K +I T NI+ + + G+ +EA + ++ P+S TY + L K+ K
Sbjct: 490 LKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKT 549
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A + M + P + N +ID + +AL + +M G P++ TY L
Sbjct: 550 EKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTML 609
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV--PWVL-ERMERN 425
I +M+ Y EM +K +P+EI F ++ K ++ W L E M +
Sbjct: 610 INMFSNRSKMQEAYYLFKEMIKK--GLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQW 667
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G + TY ++ Y DK + +M++ + PD +YT +I G G +
Sbjct: 668 GKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRV 727
Query: 486 LSYFHEMRLKGMVP 499
F+EM+ G+ P
Sbjct: 728 REMFNEMKENGVFP 741
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 180/406 (44%), Gaps = 32/406 (7%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD 184
I V+ R + D +A TFF WV + P + + IL VL ++ F + ++ E+
Sbjct: 99 ISRVLLRCQSDSVSALTFFNWVKNDLGLKPSTLNYCLILHVLAWSKEFEQAMKFLTELIL 158
Query: 185 LVNEK--------------------TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
LV + + +LL Y A M++E F + E G + +
Sbjct: 159 LVKDTDEDVFQCLFLCCQDCNWDPIIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVI 218
Query: 225 AFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
A LL L + H+ + + E + + T NI+ + +C G++ + F + +
Sbjct: 219 ACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKM 278
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+ EPD VTY T +N +G+L A L++ M+ + PD+V+ +++ LC + R+
Sbjct: 279 EEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRV 338
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
EA ++L M +RG P+V +YN+LI CK +M L EM NG P+ T
Sbjct: 339 REAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEM-IGNG-IFPDSFTCR 396
Query: 404 YLLKSLKKPEEVPWVLE------RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
L++ +K W++ +E+ G +S D Y+ ++ D + E M
Sbjct: 397 VLIQGYRKE---GWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERM 453
Query: 458 EKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++G P Y +I L + DALS E+ + + P T
Sbjct: 454 SQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLT 499
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 144/372 (38%), Gaps = 58/372 (15%)
Query: 154 PGSNVFNAILDV------LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEA 207
P S FN + + + + F+E ++ PD+V TY L+N Y + +A
Sbjct: 250 PNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIV---TYNTLINGYCGRGRLSDA 306
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNG 266
++ L DL ++ L+ LC+ V A + D+ + N ++ G
Sbjct: 307 FYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICG 366
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL------------ 314
+C G + E+K ++I + PDS T + K+G L +AL L
Sbjct: 367 YCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSIS 426
Query: 315 -----------------------FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+ M ++G P V N +I++LC + +AL +
Sbjct: 427 PDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKA 486
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN---EITFNYLLKS 408
E+ PN+ TY +LI+ LC++ R + ++EM P + Y +
Sbjct: 487 EIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREK 546
Query: 409 LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED----KVRHTWEEMEKKGMGP 464
E VL E +++Y+ ++++ CED K E M K G P
Sbjct: 547 DAGKAESLLVLFAKEFQ--IFDSESYSTLVRIV----CEDGDVAKFMELQERMLKVGFAP 600
Query: 465 DQRSYTVMIHGL 476
+ + MI GL
Sbjct: 601 NSLTCKYMIDGL 612
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 95/224 (42%), Gaps = 5/224 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
T +L+ Y + A+ + ++FG + L+ LC A+T E
Sbjct: 394 TCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLE-R 452
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
++ GY ++ N ++ C V +A +I+ P+ +TY + L + G+
Sbjct: 453 MSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGR 512
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
A +L + M G +PD C +I C +K +A +L + + +Y++
Sbjct: 513 SIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYST 572
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
L++ +C+ + E + M + + PN +T Y++ L+K
Sbjct: 573 LVRIVCEDGDVAKFMELQERMLKVGFA--PNSLTCKYMIDGLRK 614
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 150/321 (46%), Gaps = 9/321 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY IL++ AH E A+ F + G ++ +LL C K + A
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHR 172
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNALTKK 305
E G D+ + +I+L C G +A + + + + C P+ V Y T ++ K+
Sbjct: 173 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKE 232
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G + A LF+ M ++G PD+VT N ++ ALC + + +A LR+M N+ LPN TY
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 292
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
N+LI + + EM + S LP+ +T + L+ SL K +E V + M
Sbjct: 293 NNLIYGYSSTGQWKEAVRVFKEMRRH--SILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 350
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G +YN++L Y C + ++ M G+ PD ++ V+I + G L
Sbjct: 351 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 410
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
+ A+ F+EMR G+ P+ T
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVT 431
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 173/410 (42%), Gaps = 53/410 (12%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F ++ +G +P +N +L+ V++ +FD M PD T+
Sbjct: 343 ARDVFDTMAMKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY---TFN 398
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA---------- 242
+L+ YA M+++A+ +F+ ++ G D+ ++ ++ LCR ++ A
Sbjct: 399 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 458
Query: 243 --------------------------ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEA 276
E E N DI + I+N C LG V +A
Sbjct: 459 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 518
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
+ + + PD+V Y+ ++ GK+ ALR+F AM G +P+VV +++
Sbjct: 519 QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 578
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
C RI E L + REM RG P+ Y+ +I L + R EM + S +
Sbjct: 579 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTE---SGI 635
Query: 397 PNEI-TFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
+I T+N +L+ L K +E ++ + + K++ T N ++ ++ +
Sbjct: 636 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 695
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ + + + P +Y++MI L +G +E+A F M+ G P R
Sbjct: 696 LFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 745
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 154/360 (42%), Gaps = 21/360 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N ++D + + +F EM PDLV TY +++ A +++
Sbjct: 216 SPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLV---TYNSVVHALCKARAMDK 272
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILN 265
A + L + + NL+ E F E ++ D+ T+++++
Sbjct: 273 AEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMG 332
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G + EA+ + + PD +Y +N KG L LF M G P
Sbjct: 333 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D T N +I A + +A+ + EM++ G P+V TY ++I LC+I +M+ E
Sbjct: 393 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452
Query: 386 DEMEQKNGSCLPNEITFNYLLK------SLKKPEEVPWVLERMERNGCKMSTDTYNVILK 439
++M + + P++ +N L++ SL K +E ++ + NG + ++ I+
Sbjct: 453 NQMIDQGVA--PDKYAYNCLIQGFCTHGSLLKAKE---LISEIMNNGMHLDIVFFSSIIN 507
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++ ++ G+ PD Y++++ G G++E AL F M G+ P
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 111/248 (44%), Gaps = 10/248 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + V++ ++D + + ++VFD M P++V Y L+N Y ++E
Sbjct: 532 PDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV---VYCTLVNGYCKIGRIDEG 588
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNG 266
+ +F + G + ++ L + + V F E ++ DI T NI+L G
Sbjct: 589 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRG 648
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
EA +K++ + + +T T ++ + + ++ A LF ++ P
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPS 708
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT + +I L + + EA ++ M+N GC PN N +++ L K + YL
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLS 768
Query: 387 EMEQKNGS 394
+++++N S
Sbjct: 769 KIDERNFS 776
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 107 GEIEKALNQCELTLTDDLIVNVI------NRY----RFDWEAAYTFFKWVSREGDYSPGS 156
G++EKAL + ++ + NV+ N Y R D + F+ + + G P +
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRID--EGLSLFREMLQRG-IKPST 604
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
+++ I+D L +A R V F EM + ++ TY I+L +EAI +F
Sbjct: 605 ILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 664
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGN 272
+ ++ ++ + + + VE A+ F S ++ + T +I++ G
Sbjct: 665 LRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGL 724
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
V EA+ + + + CEP+S V L KK ++
Sbjct: 725 VEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEI 760
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 148/346 (42%), Gaps = 40/346 (11%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N TYGIL+ A ++ + G D AF LL LC K A
Sbjct: 90 NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149
Query: 247 ESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNAL 302
+ G ++ + NI+L G C EA + + C PD V+Y T +N
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K+G L A + M ++G P+VVT + II ALC + + +A+EVL M G +PN
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 363 TTYNSLIKHLCK----------IKRMET--------VYEYLDEMEQKNGSCLPNEITFNY 404
TYNS++ C +K+M + Y L + KNG C F+
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 405 LLKSLKKPE------------------EVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ K KPE E+ +L+ M RNG + +++++ Y
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
D+ + +M ++G+ PD +Y +I L GR+EDA+ YF +M
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 4/248 (1%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE- 348
P+ TY + + G+L + +KG + D + ++ LC KR +A++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS 408
VLR M GC+PNV +YN L+K LC R + E L M G C P+ +++ ++
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 409 LKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
K ++ M G + TY+ I+ DK M K G+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVI 525
R+Y ++HG G+ ++A+ + +M G+ P+ T + D K E K
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 526 KLTSLGLK 533
+T GLK
Sbjct: 329 SMTKRGLK 336
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 7/265 (2%)
Query: 127 NVINRY--RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD 184
VIN + D + AY + + G P +++I+ L +A+ + ++V M
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRG-ILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK 262
Query: 185 ---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+ N +TY +++ Y ++ +EAIG + G D+ + +L+ +LC+
Sbjct: 263 NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322
Query: 242 AETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A F+S K +I T +L G+ G + E ++++ P+ ++ +
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A K+GK+ A+ +F M ++G PD VT +I LC R+ +A+ +M + P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYL 385
YNSLI LC + + +Y
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKDYF 467
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 167/369 (45%), Gaps = 15/369 (4%)
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRF------VELIQVFDEMPDLVNEKTYGILLNRY 198
WVSRE SP S AIL+ L R RRF +L+ +PD+ Y +L
Sbjct: 187 WVSREMRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDV---HIYSVLFQCC 243
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDI 257
+ + D G ++ + + LCR +E AE FE K + ++
Sbjct: 244 FKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNL 303
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T + +++G+C GN+ +A +K+I+ ++ P+ V + T V+ K +L A LF
Sbjct: 304 YTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVH 363
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M + G P++ NC+I C + EA+ +L EM++ P+V TY LI LC +R
Sbjct: 364 MVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEER 423
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTY 434
+ M KN P+ +T+N L+ K + L+ M +G + + T+
Sbjct: 424 LAEANRLFQRM--KNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITF 481
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
+ ++ Y + EM KG+ PD +YT +I + + +++AL + +M
Sbjct: 482 STLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLE 541
Query: 495 KGMVPEPRT 503
G+ P T
Sbjct: 542 AGIHPNDHT 550
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 19/337 (5%)
Query: 176 IQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
I V + +P++V +G L++ + A + A +F +FG +L + L+ C+
Sbjct: 329 ILVAELLPNVV---VFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCK 385
Query: 236 YKH-VEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ +E E E D+ T I++NG C + EA R ++ + + P SVT
Sbjct: 386 SGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVT 445
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMK 354
Y + ++ K+ + AL L M G +P+++T + +ID C + I A+ + EM
Sbjct: 446 YNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMT 505
Query: 355 NRGCLPNVTTYNSLI-KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
+G +P+V TY +LI H + E + Y D +E PN+ TF L+ K
Sbjct: 506 IKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLE---AGIHPNDHTFACLVDGFWKEG 562
Query: 414 EVPWVLE-RMERNGCKMSTDTYNVILKLYVNWDCED----------KVRHTWEEMEKKGM 462
+ ++ +E N YV + C + + +M+ G+
Sbjct: 563 RLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGV 622
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
PD SY M+ + R+ D + +M G++P
Sbjct: 623 TPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILP 659
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 181/415 (43%), Gaps = 43/415 (10%)
Query: 127 NVINRYRF--DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP- 183
+IN Y D AA + G +P S + + + RA +VF MP
Sbjct: 77 TLINAYCLAGDIPAAKQHLTSLLHAG-LAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPL 135
Query: 184 --DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVE 240
L TY LL+ A MV EA+ VF + D + ++ LC + E
Sbjct: 136 RGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEE 195
Query: 241 VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
E+ N F +I N +++G+C G + A + ++ + ++C P+ TY ++
Sbjct: 196 AEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIH 255
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K GK+ A+ LF M E G +P+VVT +I C + + A +L M+ G +P
Sbjct: 256 GLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVP 315
Query: 361 NVTTYNSLIKHLCK------------------IKRMETVYEYL-------------DEME 389
N T++ LI LCK +K E VY L DE+
Sbjct: 316 NDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELM 375
Query: 390 QKNGS--CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
QK S +P+ +++ L+ L KK + +LE M G + S TY +I+ V
Sbjct: 376 QKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVRE 435
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + +++M G+ PD +YTV + ++GR+EDA S +M +G+ P
Sbjct: 436 VGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 167/423 (39%), Gaps = 52/423 (12%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
P N +L L R R F ++ + MP N +TY L+N Y A + A
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESLASRMPAR-NLRTYTTLINAYCLAGDIPAAKQHLTS 97
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF------ESEKNEFGYDIKTMNIILNGW 267
G D A+ + +L CR + A F + F Y +L+G
Sbjct: 98 LLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTY-----TALLHGL 152
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
G V EA + + C PD+ YAT V+ L + G+ A L + G +P++
Sbjct: 153 LGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNI 212
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
V N +ID C + AL+V M C PNV TY LI LCK ++E
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272
Query: 388 MEQKN-------------GSC--------------------LPNEITFNYLLKSL---KK 411
M + G C +PN+ TF+ L+ +L +K
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
EE L + + G K++ Y ++ D ++M +G PD SY+
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVI--KLTS 529
+I GL + +L A +M KG+ P T ++ D + +E G +G K I K+ +
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV--REVGSEGPKKIFDKMIA 450
Query: 530 LGL 532
G+
Sbjct: 451 TGI 453
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 160/342 (46%), Gaps = 9/342 (2%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAI 208
+ P V+NA++D A ++VF+ M N +TY L++ + VE A+
Sbjct: 208 FEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGW 267
+F R E G ++ + L+ C H++ A E N + T +++++
Sbjct: 268 VLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDAL 327
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
C V EA+ F ++K + + V Y + ++ L K GK+ A L Q M +G PD
Sbjct: 328 CKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA 387
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ + +ID LC +K++ +A +L +M +G + TY +I L + E + D+
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK 447
Query: 388 MEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
M + P+ +T+ ++S + E+ ++ +M G + TYN +++ Y N
Sbjct: 448 MIATGIN--PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANL 505
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ T+E M KG P++ SYTV++ + K ++++
Sbjct: 506 GLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV 547
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 120/285 (42%), Gaps = 8/285 (2%)
Query: 218 GELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
L L LL+ L R++ E+ +++T ++N +C+ G++ AK
Sbjct: 36 APLPPLRCLNTLLMALARHRMFPDMESLASRMPAR---NLRTYTTLINAYCLAGDIPAAK 92
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
+ ++ + PDS Y +FV + G L A R+F M +G T ++ L
Sbjct: 93 QHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGL 152
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
+ EA+ V M+ C P+ Y +++ LC+ R T + E + P
Sbjct: 153 LGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGR--TEEAEVLLEEAMSNGFEP 210
Query: 398 NEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
N + +N L+ E+ V E M+ N C + TY ++ ++ +
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLF 270
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
M + G+ P+ +YT +I G ++G L+ A H M G+VP
Sbjct: 271 SRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVP 315
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 144/326 (44%), Gaps = 21/326 (6%)
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQN 228
A R + L++ +P N+ T+ +L++ VEEA + G + + +
Sbjct: 301 AFRLLHLMETNGLVP---NDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS 357
Query: 229 LLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
L+ LC+ ++ A+ + +E F D + + +++G C + +A +D+++
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
+ VTY ++ L ++ ++F M G PD+VT + + C + R+ +A
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
++ +M +RG PN+ TYN+LI+ + + + + M K PNE ++ LL+
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWK--PNEDSYTVLLR 535
Query: 408 SLKKP---------------EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
+ K +++ +LE + ++ D Y+ ++ D ++ +H
Sbjct: 536 LVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKH 595
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYD 478
+ M+ + P + YT +I D
Sbjct: 596 FFMGMQNANLTPSEDVYTSIIDCCAD 621
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 167/364 (45%), Gaps = 24/364 (6%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYA-AAHM 203
+YS + IL R ++ I +F++M P LV TY ++L+ Y
Sbjct: 204 EYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLV---TYNVMLDVYGKMGRS 260
Query: 204 VEEAIGVFDRRKEFG-ELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM-- 260
+ +G+ D + G E D+ + ++ R ++ A FF K+E GY T
Sbjct: 261 WNKILGLLDEMRSNGLEFDEFTC-STVISACGREGLLDEARKFFARLKSE-GYVAGTFTY 318
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N +L + G EA K++ K+ C PD VTY V A + G M
Sbjct: 319 NSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIR 378
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
KG P+ +T +I+A + +AL R+MK GC+PNV TYN+++ L K R+E
Sbjct: 379 KGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEE 438
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLL-----KSLKKPEEVPWVLERMERNGCKMSTDTYN 435
+ + L +M ++ C PN +T+N +L K + K V V M+ G + + DT+N
Sbjct: 439 MIDMLCDM--RSNGCAPNSVTWNTMLAMCGNKGMHK--YVNRVFREMKSCGFEPNRDTFN 494
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++ Y + V +EEM K G P +Y +++ L +G E A S +M+ K
Sbjct: 495 ALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSK 554
Query: 496 GMVP 499
G P
Sbjct: 555 GFKP 558
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 176/358 (49%), Gaps = 22/358 (6%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR-ARRFVELIQVFDEMPD---LVNEKTY 191
+E A T F+ + + G SP +N +LDV G+ R + +++ + DEM +E T
Sbjct: 225 YERAITMFEKMRKTG-LSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTC 283
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK-HVEVAETFFESEK 250
+++ +++EA F R K G + + +LL + + E E EK
Sbjct: 284 STVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEK 343
Query: 251 NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGT 310
N D+ T N ++ + G E F +I+ P+++TY T +NA K GK
Sbjct: 344 NNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDK 403
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
AL F+ M E G P+V T N I+ L K R+ E +++L +M++ GC PN T+N+++
Sbjct: 404 ALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLA 463
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCL--PNEITFNYLLKSLKKPE---EVPWVLERMERN 425
+C K M ++Y++ + ++ SC PN TFN L+ + + +V + E M +
Sbjct: 464 -MCGNKGM---HKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKA 519
Query: 426 GCKMSTDTYNVILKLYV---NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKG 480
G TYN +L +W+ + V +M+ KG P++ SY++M++ Y KG
Sbjct: 520 GFTPCVTTYNALLNALARRGDWEAAESV---ILDMKSKGFKPNETSYSLMLN-CYAKG 573
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 6/256 (2%)
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK-LGT 310
E+ D++ IL+ + +G A ++ + K+ P VTY ++ K G+
Sbjct: 204 EYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNK 263
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
L L M G + D TC+ +I A + + EA + +K+ G + TYNSL++
Sbjct: 264 ILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQ 323
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGC 427
K L EME+ N C P+ +T+N L+ + + EE ++ M R G
Sbjct: 324 VFGKAGIYSEALSILKEMEKNN--CPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGI 381
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ TY ++ Y EDK + +M++ G P+ +Y ++ L K RLE+ +
Sbjct: 382 MPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMID 441
Query: 488 YFHEMRLKGMVPEPRT 503
+MR G P T
Sbjct: 442 MLCDMRSNGCAPNSVT 457
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 176/444 (39%), Gaps = 88/444 (19%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV---- 186
+ A FF + EG Y G+ +N++L V G+A + E + + EM PDLV
Sbjct: 297 DEARKFFARLKSEG-YVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNE 355
Query: 187 ----------------------------NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
N TY ++N Y A ++A+ F + KE G
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESG 415
Query: 219 ELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAK 277
+ ++ + +L L + +E + + + N + T N +L G
Sbjct: 416 CVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVN 475
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
R ++++ EP+ T+ + A + G +++++ M + G P V T N +++AL
Sbjct: 476 RVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNAL 535
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLP 397
+ A V+ +MK++G PN T+Y+ ++ K + E ++E E NG P
Sbjct: 536 ARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGI-EKIEE-EIYNGHIFP 593
Query: 398 N--------------------EITFNYLLKSLKKPEEVPW------------------VL 419
+ E F K KP+ V + +L
Sbjct: 594 SWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEML 653
Query: 420 ERMERNGCKMSTDTYNVILKLYVN----WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHG 475
+ +G + TYN ++ +Y W E+ ++ ++K G PD SY +I G
Sbjct: 654 RLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKG----IQKSGGKPDLVSYNTVIKG 709
Query: 476 LYDKGRLEDALSYFHEMRLKGMVP 499
+G +++A+ EM + G+ P
Sbjct: 710 FCRQGLMQEAIRTLSEMTISGIRP 733
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 18/295 (6%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
I+ C T + ++N + R R DWEAA + + +G + P ++ +L+ +
Sbjct: 517 IKAGFTPC--VTTYNALLNALAR-RGDWEAAESVILDMKSKG-FKPNETSYSLMLNCYAK 572
Query: 169 AR--RFVELIQVFDEMPDLVNEKTYG--ILLNRYAAAHMVEEAIGVFDRR-KEF---GEL 220
R +E I+ ++ N + ILL A+ A+ +R +EF G
Sbjct: 573 GGNGRGIEKIE-----EEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYK 627
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFE-SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
DL F ++L + K + A ++ D+ T N +++ + G ++ +
Sbjct: 628 PDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEI 687
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K I KS +PD V+Y T + ++G + A+R M G +P +VT N +
Sbjct: 688 LKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSG 747
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
K E EV+ M C PN TY ++ CK K+ + +++ + + + S
Sbjct: 748 KGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEMDKS 802
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 37/238 (15%)
Query: 299 VNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGC 358
V L ++ + ALRL + + DV I+ A + A+ + +M+ G
Sbjct: 181 VRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGL 240
Query: 359 LPNVTTYNSLIKHLCKIKRM-ETVYEYLDEMEQ--------------------------- 390
P + TYN ++ K+ R + LDEM
Sbjct: 241 SPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEAR 300
Query: 391 ------KNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLY 441
K+ + T+N LL+ K E +L+ ME+N C TYN ++ Y
Sbjct: 301 KFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAY 360
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
V ++ + M +KG+ P+ +YT +I+ G+ + ALS+F +M+ G VP
Sbjct: 361 VRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVP 418
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 10/182 (5%)
Query: 152 YSPGSNVFNAILDVLG------RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVE 205
Y P +FN++L + RA + LI+ PDLV TY L++ YA
Sbjct: 626 YKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLV---TYNSLMDMYARGGECW 682
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIIL 264
+ + ++ G DL ++ ++ CR + E T E + I T N +
Sbjct: 683 KGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFV 742
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G+ G E + +I+ C P+ +TY V+ K K A+ + E +
Sbjct: 743 AGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEMDKS 802
Query: 325 PD 326
D
Sbjct: 803 FD 804
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 175/364 (48%), Gaps = 13/364 (3%)
Query: 137 EAAYTFFKWVSREG-DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTY--GI 193
+ A FF + +G + P N+FN++L L R+ F + F+E+ + V Y GI
Sbjct: 110 DKALIFFNEMVDKGLVFRP--NIFNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGI 167
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
++ ++++ + ++ G ++ + L+ C+ +E A FF+ + E
Sbjct: 168 MIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFD-KMGEM 226
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
G + T +++NG G + ++ + + P+ TY +N +GK+ A
Sbjct: 227 GLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRA 286
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
LF M E+G + +VVT N +I +C ++R+ EA +++ +MK PN+ TYN+LI
Sbjct: 287 FDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGG 346
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCK 428
C + ++ LD+++ S P+ +T+N L++ K + V + ME G
Sbjct: 347 FCDVGNLDKASSLLDQLKSNGLS--PSLVTYNILIEGYSKAGNWKGVADLAREMEGRGIS 404
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSY 488
S T V++ YV +K + MEK G+ PD Y V+IHGL KG ++++
Sbjct: 405 PSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKL 464
Query: 489 FHEM 492
F M
Sbjct: 465 FRSM 468
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 167/373 (44%), Gaps = 41/373 (10%)
Query: 180 DEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV 239
++ P + Y ++N + + ++++A+ F+ + G + + F +LL L R
Sbjct: 85 NQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCF 144
Query: 240 EVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
E A FF K +D+ + I++ G C GN+ ++ + + P+ V Y T +
Sbjct: 145 EKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLI 204
Query: 300 -----------------------------------NALTKKGKLGTALRLFQAMWEKGRK 324
N L KKG LF+ M G
Sbjct: 205 DGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLF 264
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P++ T NC+++ C + +I A ++ EM+ RG NV TYN+LI +C+ +R+ +
Sbjct: 265 PNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKL 324
Query: 385 LDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
+D+M K + PN IT+N L+ + ++ +L++++ NG S TYN++++ Y
Sbjct: 325 VDQM--KKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGY 382
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
V EME +G+ P + + TV+I +E A + M G+VP+
Sbjct: 383 SKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDV 442
Query: 502 RT-GILVNDMNIK 513
G+L++ + +K
Sbjct: 443 YVYGVLIHGLCMK 455
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 156/368 (42%), Gaps = 25/368 (6%)
Query: 153 SPGSNVFNAILDV------LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEE 206
SP ++ ++D + RAR F + + EM + N+ T+ +L+N + ++
Sbjct: 194 SPNVVIYTTLIDGCCKNGDIERARLFFDKM---GEMGLVANQYTFTVLINGLFKKGLKKD 250
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIIL 264
+F++ K G +L + L+ C + A F+ E E G ++ T N ++
Sbjct: 251 GFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFD-EMRERGVEANVVTYNTLI 309
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G C V+EA++ + K+ P+ +TY T + G L A L + G
Sbjct: 310 GGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLS 369
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P +VT N +I+ ++ REM+ RG P+ T LI +++ ME ++
Sbjct: 370 PSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQI 429
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
ME+ +P+ + L+ L +E + M + S YN ++ Y
Sbjct: 430 YSSMEKF--GLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGY 487
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA---LSYFHEMRLKGMV 498
D + EME KG+ P+ SY+ +I L G+ E+A L E++LK
Sbjct: 488 CKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLK--- 544
Query: 499 PEPRTGIL 506
P IL
Sbjct: 545 --PSASIL 550
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 115/292 (39%), Gaps = 41/292 (14%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N TY L+N Y + A +FD +E G ++ + L+ +CR + V AE
Sbjct: 266 NLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLV 325
Query: 247 ES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ +K ++ T N ++ G+C +GN+ +A + + P VTY + +K
Sbjct: 326 DQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKA 385
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDA----------------------------- 336
G L + M +G P VTC +IDA
Sbjct: 386 GNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVY 445
Query: 337 ------LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
LC K + E+ ++ R M P+ YN++I CK L EME
Sbjct: 446 GVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEA 505
Query: 391 KNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
K +PN +++ ++ L K EE +L++M K S N+I K
Sbjct: 506 K--GLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISK 555
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 16/233 (6%)
Query: 148 REGDYSPGSNVFNAIL----DV--LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAA 201
++ SP +N ++ DV L +A ++ ++ P LV TY IL+ Y+ A
Sbjct: 329 KKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLV---TYNILIEGYSKA 385
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGY--DI 257
+ GV D +E + + + Y ++ E F+ S +FG D+
Sbjct: 386 GNWK---GVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDV 442
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
++++G C+ GN+ E+ + ++ + + EP V Y T ++ K+ ALRL +
Sbjct: 443 YVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLRE 502
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
M KG P+V + + II LC + EA +L +M P+ + N + K
Sbjct: 503 MEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISK 555
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
T +L++ Y +E+A ++ ++FG + D+ + L+ LC +++ + F S
Sbjct: 409 TCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSM 468
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
E + D+ N +++G+C N Y A R +++ P+ +Y++ + L K GK
Sbjct: 469 GEMHVEPSDV-IYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGK 527
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
A L M E KP N I A
Sbjct: 528 WEEAEVLLDKMIELQLKPSASILNMISKA 556
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 177/393 (45%), Gaps = 25/393 (6%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPG----SNVFNAILDVLGRARRFVELIQVFDEMPD-- 184
R D A F S E YS G F ++ L A F ++ + M +
Sbjct: 23 RAERDLRKAKIIFDSASAE--YSNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEK 80
Query: 185 -LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE 243
+ E+ + + Y HM +AI VF + +FG ++ ++ L ++VA
Sbjct: 81 CRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAM 140
Query: 244 TFFESEKNEFGY--DIKTMNIILNGWCV-LGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+F++ + E G + ++N+++ C G + A ++++ K C+PDS TY T +N
Sbjct: 141 SFYKYMR-EMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLIN 199
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
L K GK A LF+ M KG P VVT +C++ LC + EA+ + +MK + P
Sbjct: 200 GLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEP 259
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPW 417
NV TY+SL+ LCK E L+ M +K PN +T++ L+ L K E
Sbjct: 260 NVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHK--PNMVTYSTLINGLCKEGKLAEAVE 317
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV------ 471
L+RM+ G K Y I+ + N + +EM + P++ ++++
Sbjct: 318 TLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNN 377
Query: 472 -MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ GL G L + + MR +G+ + T
Sbjct: 378 MVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGT 410
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 166/358 (46%), Gaps = 17/358 (4%)
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
+F +I GR ++ I+VF +M D +K+Y + + ++ A+ +
Sbjct: 87 IFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYM 146
Query: 215 KEFGELDDLSAFQNLLLWLCRYKH-VEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGN 272
+E G + + L+ LC+ ++ A E F E K D T ++NG C LG
Sbjct: 147 REMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGK 206
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
+EAK +K++ C P VTY+ ++ L + G + A+ LF M +K +P+V T +
Sbjct: 207 TFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSS 266
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
++D LC EA+E+L M + PN+ TY++LI LCK ++ E LD M+ +
Sbjct: 267 LMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQG 326
Query: 393 GSCLPNEITFNYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKL---YVNWDC 446
P+ + ++ +++K +E L+ M + T+++ +KL V C
Sbjct: 327 LK--PDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLC 384
Query: 447 E----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
++ + M +G+ D ++ ++ KG L A F EM L G VP+
Sbjct: 385 TNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPD 442
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/423 (20%), Positives = 170/423 (40%), Gaps = 66/423 (15%)
Query: 23 HSQLTTQFSKLQSCNSV-TSHKTLIPIINLQARNSEFLFLGRIETAQLVHSLANS----D 77
H+ SKL S N + + L + + R +E +FL VH ++
Sbjct: 50 HTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFH 109
Query: 78 EKSEFQRYPGDEIAINV------QNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINR 131
+ ++F P D+ I+V +N LK K E + Q ++L ++++ + +
Sbjct: 110 KMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSL--NVLIKALCK 167
Query: 132 YRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDL 185
+AA+ F+ + + G P S + +++ L + + E ++F EM P +
Sbjct: 168 NSGTIDAAFEIFREMPKRG-CDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSV 226
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC----------- 234
V TY L++ A V+EA+G+FD+ K+ ++ + +L+ LC
Sbjct: 227 V---TYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMEL 283
Query: 235 -----RYKH--------------------VEVAETFFESEKNEFGYDIKTMNIILNGWCV 269
R +H E ET + D I+NG+C
Sbjct: 284 LEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCN 343
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYA-------TFVNALTKKGKLGTALRLFQAMWEKG 322
+ EA + +++ + P+ VT++ V L G L + +L+ M +G
Sbjct: 344 IRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRG 403
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
D T + ++ C K + +A + EM GC+P+ +++++ +++ +
Sbjct: 404 ISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAF 463
Query: 383 EYL 385
E +
Sbjct: 464 ESI 466
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 44/406 (10%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYG 192
+ + AY + + + D SP N+++ +AR E ++FDE + N TY
Sbjct: 379 NMDKAYEIYNQM-KNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYN 437
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA---------- 242
LL+ + EA ++++ G + ++ N++L C+ ++ A
Sbjct: 438 SLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEK 497
Query: 243 -------------ETFFESEKNEFGYDIK-------------TMNIILNGWCVLGNVYEA 276
+ +F+ E+ + + T NII+NG C G E+
Sbjct: 498 GLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSES 557
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
+ K +++ P +TY ++ K+G + +AL ++ M + G P+V T +I+
Sbjct: 558 QDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLING 617
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
C + AL+V+ EMKN+G +VT Y +LI C+ M + L E+++ S
Sbjct: 618 FCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLS-- 675
Query: 397 PNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
PN++ ++ ++ +K + + L +RM G Y ++ +
Sbjct: 676 PNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASEL 735
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ EM KG+ PD +Y+V+IHGL +KG+LE+A +M K M P
Sbjct: 736 YAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTP 781
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 184/433 (42%), Gaps = 53/433 (12%)
Query: 127 NVINRYRFD-WEAAYTFFKW----VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE 181
N++NR+ D W + SR D+ S VFN +L+ + +R + + F+
Sbjct: 120 NLLNRFASDDWGPVPSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNS 179
Query: 182 M--PDLVNEKT-YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
+ D+V T I L+ +M+ EA V+++ G D + ++ R
Sbjct: 180 LIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGK 239
Query: 239 VEVAETFFESEKNE-FGYDIKTMNIIL---------------------NGW--------- 267
+E AE +F KN+ D + +I++ GW
Sbjct: 240 LEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTR 299
Query: 268 ----CV-LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
C+ G + EA + +++ + V T + K+G L +AL LF M E G
Sbjct: 300 VIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENG 359
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P+ VT II+ C + +A E+ +MKN+ P V NSLI+ K + E
Sbjct: 360 ICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEAS 419
Query: 383 EYLDEMEQKNGSC-LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
+ DE +C + N T+N LL L K E + E+M R G + S +YN ++
Sbjct: 420 KLFDEAV----ACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMI 475
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ D + EM +KG+ P+ +Y+V++ G + KG E A + MR + +
Sbjct: 476 LGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIA 535
Query: 499 PEPRT-GILVNDM 510
P T I++N +
Sbjct: 536 PSDFTCNIIINGL 548
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 162/403 (40%), Gaps = 67/403 (16%)
Query: 141 TFFKWVSREGDYSPGSNVFNAILD-------------VLGRARR---------FVELIQV 178
+ W+ +EG S +++ ++ +LG ++ FVE+++
Sbjct: 438 SLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEK 497
Query: 179 FDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ-NLLL-WLCRY 236
+ P+L+ TY +L++ Y E A G++DR + GE S F N+++ LC+
Sbjct: 498 GLK-PNLI---TYSVLMDGYFKKGDTEYAFGLYDRMR--GENIAPSDFTCNIIINGLCKA 551
Query: 237 KHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTY 295
++ + E F T N I++G+ G+V A + ++ K P+ TY
Sbjct: 552 GRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTY 611
Query: 296 ATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
+N K + AL++ M KG + DV +ID C K + A ++L E++
Sbjct: 612 TNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQE 671
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC-------------------- 395
G PN Y+S+I K++ ME M + C
Sbjct: 672 VGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLF 731
Query: 396 -------------LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK 439
+P+ IT++ L+ L + E +LE M+R + YN ++
Sbjct: 732 ASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLIT 791
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
+ + EM KG+ PD +Y ++++G G L
Sbjct: 792 GHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 175/399 (43%), Gaps = 35/399 (8%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A+ F+ + G +P + ++D +A + +F+EM P +V T
Sbjct: 305 EKAFLLFQEMKMVG-VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVV---T 360
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-------- 242
Y L++ Y A V +A +F R + G + + L+ LC+ ++ A
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 420
Query: 243 --------ETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ +F E ++ ++ T +++G C V A ++ S CEP+ +
Sbjct: 421 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 480
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
Y ++ K GK+ +A +F M + G P V T +ID + R+ A++VL +M
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
C PNV TY ++I LC+I E + L ME+K C PN +T+ L+ L K
Sbjct: 541 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG--CSPNVVTYTALIDGLGKAG 598
Query: 414 EVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
++ L+ +M R GC + TY V++ DK R EM++ + Y
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYR 658
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVP-EPRTGILVN 508
I G + K + +L EM G VP P G+L++
Sbjct: 659 CAIQG-FSKSFIA-SLGILEEMESYGTVPIAPVYGMLID 695
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 160/368 (43%), Gaps = 34/368 (9%)
Query: 171 RFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
+F + Q+ EM PD TY ++ A VE+A +F K G D+
Sbjct: 268 KFDKAFQLIKEMMRKGFVPD---TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKD 282
+ L+ C+ +E A+ FE E G + T +++ + V +A +
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFE-EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 383
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK----------------PD 326
++ + C P+ VTY V+ L K G + A ++ + P+
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT ++D LC ++ A E+L M + GC PN Y++LI CK ++++ E
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVN 443
+M K G LP+ T+ L+ + K + VL +M ++ C + TY ++
Sbjct: 504 QM-TKCGY-LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+K ME+KG P+ +YT +I GL G+++ +L F +M KG P T
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621
Query: 504 -GILVNDM 510
+L+N +
Sbjct: 622 YRVLINHL 629
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 139/330 (42%), Gaps = 30/330 (9%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
N TYG L++ AH V+ A + D G + + L+ C+ ++ A E F
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ K + + T +++ G + A + ++K C P+ VTY ++ L +
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G+ AL+L M EKG P+VVT +ID L +I +L++ +M +GC PN TY
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQ-------KNGSCLPNEITFNYLLKSLKKPEEVPWV 418
LI HLC ++ L EM+Q + C + ++ + SL +
Sbjct: 623 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSF-IASLG-------I 674
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME--------KKGMGPDQRSYT 470
LE ME G Y +++ DC K ME + D Y
Sbjct: 675 LEEMESYGTVPIAPVYGMLI------DCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYA 728
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+I L ++E+A + EM +G VPE
Sbjct: 729 SLIQALCLASQVEEAFRLYSEMTRRGFVPE 758
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 168/430 (39%), Gaps = 81/430 (18%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVN--EKTYG 192
D+ AY ++ G PG V+N + + + PDL++ EK YG
Sbjct: 192 DYAYAYKLLNRMTTCG-CPPGYVVYNIFIGSICGQEKLPS--------PDLLDLAEKIYG 242
Query: 193 ------ILLNRYAAAHMVEEAIGVFDRRKEF---------GELDDLSAFQNLLLWLCRYK 237
+LN+ A+ GV K F G + D S + ++ +LC
Sbjct: 243 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 302
Query: 238 HVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
VE A F+ ++K + + PD TY
Sbjct: 303 KVEKAFLLFQ--------EMKMVGV--------------------------TPDVYTYTI 328
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+++ K G + A LF+ M G P VVT +I A K++P+A ++ M + G
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC--------------LPNEITFN 403
C PN TY +L+ LCK + +E ++ + S PN +T+
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448
Query: 404 YLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
L+ L K +V +L+ M +GC+ + Y+ ++ + D + + +M K
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 508
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQ 520
G P +YT +I ++ GRL+ A+ +M P T + D ++ E
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE---- 564
Query: 521 GKKVIKLTSL 530
+K +KL SL
Sbjct: 565 SEKALKLLSL 574
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 147/354 (41%), Gaps = 11/354 (3%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY L+ ++A V+ V E G D LC K A+ E
Sbjct: 42 TYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALC--KEGRWADALDMIE 99
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ +F D +++G EA F + + C P+ VTY T ++ KK +LG
Sbjct: 100 REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLG 159
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
R+ M +G P+ N ++ + C +K A ++L M GC P YN I
Sbjct: 160 WCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFI 219
Query: 370 KHLCKIKRMETVYEYLDEMEQKNG-----SCLPNEI---TFNYLLKSLKKPEEVPWVLER 421
+C +++ + + LD E+ G +C+ N++ F L + K ++ +++
Sbjct: 220 GSICGQEKLPSP-DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 278
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M R G T TY+ ++ + +K ++EM+ G+ PD +YT++I G
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338
Query: 482 LEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
+E A F EMR G P T + +K K+ + ++ G + N
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 108/296 (36%), Gaps = 78/296 (26%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR------- 342
P VTY V L+ G++ R+ + M E G D T C ALC + R
Sbjct: 38 PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDM 97
Query: 343 -------------------------IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
EA+ L M+ C+PNV TY +L+ K K+
Sbjct: 98 IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 157
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTY 434
+ ++ M + C PN FN L+ S ++ + +L RM GC Y
Sbjct: 158 LGWCKRIINMMMTEG--CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 215
Query: 435 NVIL-------------------KLY---VNWDCE-------------------DKVRHT 453
N+ + K+Y + +C DK
Sbjct: 216 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 275
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
+EM +KG PD +Y+ +I L ++E A F EM++ G+ P+ T ++ D
Sbjct: 276 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 99/236 (41%), Gaps = 18/236 (7%)
Query: 153 SPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIG 209
+P + A++D L G + + ++L+ + +E N TY L++ A ++ ++
Sbjct: 546 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLD 605
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF------GYDIKTMNII 263
+F + G + ++ L+ LC ++ A K + GY
Sbjct: 606 LFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFS 665
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE--K 321
+ LG + E + + P + Y ++ +K G+L A+ L + M E
Sbjct: 666 KSFIASLGILEEMESYGT-------VPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPS 718
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
K D +I ALC ++ EA + EM RG +P ++ + LIK L ++K+
Sbjct: 719 SVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKK 774
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + A++D LG+A + + +F +M P+ V TY +L+N AA ++++
Sbjct: 581 SPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV---TYRVLINHLCAAGLLDK 637
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE---VAETFFESEKNEFGY--DIKTMN 261
A R GE+ + L + C + +A E +G
Sbjct: 638 A------RLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYG 691
Query: 262 IILNGWCVLGNVYEAKRFWKDI--IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
++++ + G + A K++ + S + D+ YA+ + AL ++ A RL+ M
Sbjct: 692 MLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 751
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEV 349
+G P++ C+I L K+ EAL++
Sbjct: 752 RRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 150/321 (46%), Gaps = 9/321 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY IL++ AH E A+ F + G ++ +LL C K + A
Sbjct: 126 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHR 185
Query: 250 KNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIK--SKCEPDSVTYATFVNALTKK 305
E G D+ + +I+L C G +A + + + + C P+ V Y T ++ K+
Sbjct: 186 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKE 245
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G + A LF+ M ++G PD+VT N ++ ALC + + +A LR+M N+ LPN TY
Sbjct: 246 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 305
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERM 422
N+LI + + EM + S LP+ +T + L+ SL K +E V + M
Sbjct: 306 NNLIYGYSSTGQWKEAVRVFKEMRRH--SILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 363
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G +YN++L Y C + ++ M G+ PD ++ V+I + G L
Sbjct: 364 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 423
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
+ A+ F+EMR G+ P+ T
Sbjct: 424 DKAMIIFNEMRDHGVKPDVVT 444
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 172/409 (42%), Gaps = 51/409 (12%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYG 192
A F ++ +G +P +N +L+ V++ +FD M PD T+
Sbjct: 356 ARDVFDTMAMKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY---TFN 411
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA---------- 242
+L+ YA M+++A+ +F+ ++ G D+ ++ ++ LCR ++ A
Sbjct: 412 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 471
Query: 243 --------------------------ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEA 276
E E N DI + I+N C LG V +A
Sbjct: 472 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 531
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
+ + + PD+V Y+ ++ GK+ ALR+F AM G +P+VV +++
Sbjct: 532 QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 591
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
C RI E L + REM RG P+ Y+ +I L + R TV + E
Sbjct: 592 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR--TVPAKMKFHEMTESGIA 649
Query: 397 PNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
+ T+N +L+ L K +E ++ + + K++ T N ++ ++ +
Sbjct: 650 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 709
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
+ + + + P+ +Y++MI L +G +E+A F M+ G P R
Sbjct: 710 FASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 758
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 154/360 (42%), Gaps = 21/360 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N ++D + + +F EM PDLV TY +++ A +++
Sbjct: 229 SPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLV---TYNSVVHALCKARAMDK 285
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILN 265
A + L + + NL+ E F E ++ D+ T+++++
Sbjct: 286 AEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMG 345
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G + EA+ + + PD +Y +N KG L LF M G P
Sbjct: 346 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 405
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D T N +I A + +A+ + EM++ G P+V TY ++I LC+I +M+ E
Sbjct: 406 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 465
Query: 386 DEMEQKNGSCLPNEITFNYLLK------SLKKPEEVPWVLERMERNGCKMSTDTYNVILK 439
++M + + P++ +N L++ SL K +E ++ + NG + ++ I+
Sbjct: 466 NQMIDQGVA--PDKYAYNCLIQGFCTHGSLLKAKE---LISEIMNNGMHLDIVFFSSIIN 520
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++ ++ G+ PD Y++++ G G++E AL F M G+ P
Sbjct: 521 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 580
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 112/248 (45%), Gaps = 10/248 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + V++ ++D + + ++VFD M P++V Y L+N Y ++E
Sbjct: 545 PDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV---VYCTLVNGYCKIGRIDEG 601
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMNIILNG 266
+ +F + G + ++ L + + V F E ++ DI T NI+L G
Sbjct: 602 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRG 661
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
EA +K++ + + +T T ++ + + ++ A LF ++ P+
Sbjct: 662 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPN 721
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT + +I L + + EA ++ M+N GC PN N +++ L K + YL
Sbjct: 722 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLS 781
Query: 387 EMEQKNGS 394
+++++N S
Sbjct: 782 KIDERNFS 789
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 110/258 (42%), Gaps = 17/258 (6%)
Query: 107 GEIEKALNQCELTLTDDLIVNVI------NRY----RFDWEAAYTFFKWVSREGDYSPGS 156
G++EKAL + ++ + NV+ N Y R D + F+ + + G P +
Sbjct: 561 GKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRID--EGLSLFREMLQRG-IKPST 617
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
+++ I+D L +A R V F EM + ++ TY I+L +EAI +F
Sbjct: 618 ILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 677
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGN 272
+ ++ ++ + + + VE A+ F S ++ ++ T +I++ G
Sbjct: 678 LRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGL 737
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
V EA+ + + + CEP+S V L KK ++ A + E+ + +T
Sbjct: 738 VEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAML 797
Query: 333 IIDALCFKKRIPEALEVL 350
++D K E + L
Sbjct: 798 LVDLFSSKGTCREQIRFL 815
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 174/389 (44%), Gaps = 18/389 (4%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR------ARRFVELIQV 178
+V + R + D A FF W R+ YS V+ +LDVL + ARR + L+
Sbjct: 169 LVCAVLRSQADERVALNFFYWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTR 228
Query: 179 FD-EMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
E P + +G ++ Y+ A + A+ V ++ G LS + L +
Sbjct: 229 RGIECP----PEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGG 284
Query: 238 HVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
+E A F E + DI T N ++ G+C L + +A + C PD V+Y
Sbjct: 285 KLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYY 344
Query: 297 TFVNALTKKGKLGTALRLFQAM-WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
T + L K+ K+ L + M W PD VT N +I L +AL L+E ++
Sbjct: 345 TVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQD 404
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKP 412
+G + Y++++ C+ RM+ + +M + C P+ +T+ ++ L +
Sbjct: 405 KGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRG--CNPDVVTYTAIVDGFCRLGRI 462
Query: 413 EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
+E +L++M ++GCK +T +Y +L + + R E+ P+ +Y +
Sbjct: 463 DEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAV 522
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+HGL +G+L +A EM KG P P
Sbjct: 523 MHGLRREGKLSEACDLTREMVEKGFFPTP 551
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 172/373 (46%), Gaps = 12/373 (3%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L +A +F+E +QV PD+V TY L+ Y + +E+A+ + G D +
Sbjct: 286 LEKALKFLERMQVTGIKPDIV---TYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVS 342
Query: 226 FQNLLLWLCRYKHVEVAETFFESE--KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
+ ++ +LC+ K +E + E + D T N +++ G+ +A F K+
Sbjct: 343 YYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEA 402
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
D V Y+ V++ +KG++ A L M+ +G PDVVT I+D C RI
Sbjct: 403 QDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRI 462
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
EA ++L++M GC PN +Y +L+ LC + E ++ E+ + PN IT+
Sbjct: 463 DEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWT--PNAITYG 520
Query: 404 YLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK----VRHTWEEMEK 459
++ L++ ++ + + R + V + L + C+++ + EE
Sbjct: 521 AVMHGLRREGKLSEACD-LTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLN 579
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
KG + ++T +IHG G +E ALS +M L G P+ T + D K E
Sbjct: 580 KGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDE 639
Query: 520 QGKKVIKLTSLGL 532
+ ++K+ S GL
Sbjct: 640 AAELIVKMLSKGL 652
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 149/343 (43%), Gaps = 46/343 (13%)
Query: 182 MPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+PD V TY L++ + ++A+ ++ G D + ++ C+ ++
Sbjct: 373 IPDQV---TYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDE 429
Query: 242 AETF-FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
A++ + D+ T I++G+C LG + EAK+ + + K C+P++V+Y +N
Sbjct: 430 AKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLN 489
Query: 301 ALT-----------------------------------KKGKLGTALRLFQAMWEKGRKP 325
L ++GKL A L + M EKG P
Sbjct: 490 GLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFP 549
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
V N +I +LC +++ EA + L E N+GC NV + ++I C+I ME L
Sbjct: 550 TPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVL 609
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
D+M P+ +T+ L +L K +E ++ +M G + TY ++ Y
Sbjct: 610 DDMYLSGKH--PDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYS 667
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
W D + + E+M K+ P + Y +I L D G LE+A
Sbjct: 668 QWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEEA 708
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 8/253 (3%)
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
+C P++ Y + ++ GKL ALR+ M + G +P + CN I L ++ +A
Sbjct: 232 ECPPEAFGYVMV--SYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKA 289
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
L+ L M+ G P++ TYNSLIK C + R+E E + + K C P+++++ ++
Sbjct: 290 LKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKG--CPPDKVSYYTVM 347
Query: 407 KSL---KKPEEVPWVLERMERNGCKMSTD-TYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
L KK EEV ++E+M N + TYN ++ + D +E + KG
Sbjct: 348 GFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGF 407
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGK 522
D+ Y+ ++H KGR+++A S +M +G P+ T + D +L E K
Sbjct: 408 HIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKK 467
Query: 523 KVIKLTSLGLKGN 535
+ ++ G K N
Sbjct: 468 ILQQMYKHGCKPN 480
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 8/240 (3%)
Query: 154 PGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P + + A+L+ L G++ E+I V +E N TYG +++ + EA +
Sbjct: 479 PNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDL 538
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI--ILNGWC 268
E G L+ LC+ + V A+ + E N+ G I +N +++G+C
Sbjct: 539 TREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNK-GCAINVVNFTTVIHGFC 597
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+G++ A D+ S PD+VTY +AL KKG+L A L M KG P V
Sbjct: 598 QIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPV 657
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +I R+ + L +L +M R P T YN +I+ LC +E + L ++
Sbjct: 658 TYRSVIHRYSQWGRVDDMLNLLEKMLKRQ--PFRTVYNQVIEKLCDFGNLEEAEKLLGKV 715
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 175/415 (42%), Gaps = 43/415 (10%)
Query: 127 NVINRYRF--DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP- 183
+IN Y D A+ + R G ++P S+ + + + RA ++F MP
Sbjct: 77 TLINAYCLAGDLPASKRHLSSLLRAG-FAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPL 135
Query: 184 --DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEV 241
+ TY LL+ A MV EA+ VF + G D + ++ LC
Sbjct: 136 RGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTRE 195
Query: 242 AETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
AET E F ++ N +++G+C +G++ A ++ + + C P+ TY ++
Sbjct: 196 AETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELIS 255
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
K KL A+ LF M + G P+VVT +I C ++ A +L+ M+N G +P
Sbjct: 256 GFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVP 315
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQK-------------NGSC------------ 395
N T + LI LCK +R+ L + QK +G C
Sbjct: 316 NEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLM 375
Query: 396 --------LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
+P+ T++ L+ L K+ E VL+ M G + S TY +I+ V
Sbjct: 376 QTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVRE 435
Query: 445 DCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D + ++M G+ PD +YT+ + +GR+EDA M G+ P
Sbjct: 436 VGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCP 490
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 164/421 (38%), Gaps = 56/421 (13%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
NA L L R R ++ MP N +TY L+N Y A + + G
Sbjct: 44 LNAFLMALARHRMLADMESFASRMPAR-NLRTYTTLINAYCLAGDLPASKRHLSSLLRAG 102
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFF------ESEKNEFGYDIKTMNIILNGWCVLGN 272
D A+ + ++ CR + A F + F Y +L+G C G
Sbjct: 103 FAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTY-----TALLHGLCGAGM 157
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
V EA + + C PD YAT V+ L G+ A L +G +P+VV N
Sbjct: 158 VREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNA 217
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME------------- 379
+ID C + A++V M GC PNV TY LI CK ++++
Sbjct: 218 LIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAG 277
Query: 380 ----------------------TVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---E 414
Y L ME N +PNE T + L+ +L K E E
Sbjct: 278 LVPNVVTYTALIQGQCSDGQLDCAYRLLQSME--NSGLVPNEWTCSVLIDALCKHERVGE 335
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+L + + G K++ Y ++ + + +G PD +Y+ +I
Sbjct: 336 AQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLID 395
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVI--KLTSLGL 532
GL + L +A+ +M KG+ P P T ++ D + +E G G K I K+ + G+
Sbjct: 396 GLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV--REVGADGSKKILDKMIAAGI 453
Query: 533 K 533
K
Sbjct: 454 K 454
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 139/316 (43%), Gaps = 11/316 (3%)
Query: 223 LSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
L+AF L+ L R++ + E+F +++T ++N +C+ G++ +KR
Sbjct: 44 LNAF---LMALARHRMLADMESFASRMPAR---NLRTYTTLINAYCLAGDLPASKRHLSS 97
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
++++ PDS Y +FV + G L A RLF M +G T ++ LC
Sbjct: 98 LLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGM 157
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ EA+ V M+ GC P+ Y +++ LC R L + + PN + +
Sbjct: 158 VREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFE--PNVVVY 215
Query: 403 NYLLK---SLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
N L+ ++ E V ERM+ NGC + TY ++ + D+ + M
Sbjct: 216 NALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVD 275
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
G+ P+ +YT +I G G+L+ A M G+VP T ++ D K + GE
Sbjct: 276 AGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGE 335
Query: 520 QGKKVIKLTSLGLKGN 535
+ L G+K N
Sbjct: 336 AQLLLGSLIQKGIKVN 351
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 160/349 (45%), Gaps = 12/349 (3%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL----VNEKTYGIL 194
A T EG + P V+NA++D + VF+ M D+ N +TY L
Sbjct: 196 AETLLSDAMAEG-FEPNVVVYNALIDGYCNVGDLELAVDVFERM-DVNGCSPNVRTYTEL 253
Query: 195 LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFG 254
++ + + ++ A+ +F R + G + ++ + L+ C ++ A +S +N
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313
Query: 255 YDIK-TMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALR 313
+ T +++++ C V EA+ +I+ + + + Y + ++ L K G+ A R
Sbjct: 314 VPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADR 373
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
L Q + +G PD T + +ID LC +K + EA+ VL +M +G P+ TY +I L
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV 433
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMS 430
+ + + LD+M P+ T+ ++S + E+ ++ M +G +
Sbjct: 434 REVGADGSKKILDKMIAAGIK--PDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPN 491
Query: 431 TDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
TYN ++ Y N + T++ M G P++ SYTV++ L K
Sbjct: 492 LVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKK 540
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 144/346 (41%), Gaps = 22/346 (6%)
Query: 175 LIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
L+Q + + NE T +L++ V EA + + G + + +L+ LC
Sbjct: 304 LLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLC 363
Query: 235 RYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ A+ ++ ++ F D T + +++G C + EA D+++ +P V
Sbjct: 364 KAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPV 423
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY ++ L ++ + ++ M G KPDV T + + C + R+ +A ++ M
Sbjct: 424 TYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHM 483
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
+ G PN+ TYN+LI + + M NG C PNE ++ LL+ L K E
Sbjct: 484 VDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHM-VANG-CKPNEESYTVLLRLLIKKE 541
Query: 414 E---VP------W----------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
+P W +LE M + D YN L D D+ +
Sbjct: 542 SSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILL 601
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
EM+ + P + YT +I L +AL++ M G +P+
Sbjct: 602 IEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQ 647
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 70/367 (19%), Positives = 130/367 (35%), Gaps = 82/367 (22%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
I+K + E+ T LI + RF AA + + +G + P ++ +++++D L R
Sbjct: 344 IQKGIKVNEIVYTS-LIDGLCKAGRF--AAADRLMQTLVSQG-FVPDAHTYSSLIDGLCR 399
Query: 169 ARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
+ E + V D+M P V TY I+++ + + + D+ G D
Sbjct: 400 QKELSEAMLVLDDMMEKGVQPSPV---TYTIIIDELVREVGADGSKKILDKMIAAGIKPD 456
Query: 223 LSAFQNLLLWLCRYKHVEVAE-TFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWK 281
+ + + C +E AE + ++ T N ++ G+ LG +A +K
Sbjct: 457 VFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFK 516
Query: 282 DIIKSKCEPDSVTYAT-------------------------------------------- 297
++ + C+P+ +Y
Sbjct: 517 HMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPS 576
Query: 298 -------FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
F+ +L + +L A L M P II C K + EAL +
Sbjct: 577 EIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFV 636
Query: 351 REMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLK 410
M G +P + +Y +I LC+ ++T + +M K +NY
Sbjct: 637 DSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKE---------YNY------ 681
Query: 411 KPEEVPW 417
EE+ W
Sbjct: 682 --EEIAW 686
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 167/368 (45%), Gaps = 10/368 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL-VNEKTYGI--LLNRYAAAHMVEEAIGV 210
PG VF+A+ VL E IQ F +M V KT LL+++A +
Sbjct: 23 PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK-NEFGYDIKTMNIILNGWCV 269
F G + + ++ +C+ VE A FE K D T N +++G+
Sbjct: 83 FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+G + + F++++ CEPD +TY +N K GKL L F+ M G KP+VV+
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ ++DA C + + +A++ +M+ G +PN TY SLI CKI + + +EM
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML 262
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK-LYVNWD 445
Q N +T+ L+ L + P E +L+ M K++ T+ V++ L N
Sbjct: 263 QVGVEW--NVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKL 320
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
+ + G+ + YT MI GL ++E A + F +M KG+VP+
Sbjct: 321 VSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYT 380
Query: 506 LVNDMNIK 513
+ D N K
Sbjct: 381 SLMDGNFK 388
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 160/365 (43%), Gaps = 21/365 (5%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TY 191
D EAA F+ + G P + +N+++D G+ R + + F+EM D+ E TY
Sbjct: 110 DVEAARGLFEEMKFRG-LIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 168
Query: 192 GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK- 250
L+N + + + + F K G ++ ++ L+ C+ ++ A F+ +
Sbjct: 169 NALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 228
Query: 251 -----NEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
NE+ Y +++ +C +GN+ +A R ++++ E + VTY ++ L
Sbjct: 229 VGLVPNEYTY-----TSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGW 283
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR-GCLPNVTT 364
L L M E K VVT +ID LC K + +A++ + N G N
Sbjct: 284 ENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAI 343
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ER 421
Y ++I LCK ++E ++M QK +P+ + L+ K V L ++
Sbjct: 344 YTAMIDGLCKGNQVEAATTLFEQMAQK--GLVPDRTAYTSLMDGNFKQGNVLEALALRDK 401
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M G K+ Y ++ + + K R EEM +G+ PD+ ++ Y+ G
Sbjct: 402 MVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 461
Query: 482 LEDAL 486
+ +A+
Sbjct: 462 INEAV 466
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 34/266 (12%)
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
LG V EA + + + + + P + + ++ K GK R F+ M G KP V T
Sbjct: 38 LGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFT 97
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +ID +C + + A + EMK RG +P+ TYNS+I K+ R++ + +EM
Sbjct: 98 YNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEM- 156
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
K+ C P+ IT+N L+ K ++P LE
Sbjct: 157 -KDMCCEPDVITYNALINCFCKFGKLPKGLE----------------------------- 186
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
+ EM++ G+ P+ SY+ ++ +G ++ A+ ++ +MR G+VP T + D
Sbjct: 187 ---FFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 243
Query: 510 MNIKLKERGEQGKKVIKLTSLGLKGN 535
K+ + + ++ +G++ N
Sbjct: 244 AYCKIGNLSDAFRLANEMLQVGVEWN 269
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 135/312 (43%), Gaps = 16/312 (5%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRY 198
FF+ + R G P ++ ++D + + I+ + +M + NE TY L++ Y
Sbjct: 187 FFREMKRNG-LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAY 245
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDI 257
+ +A + + + G ++ + L+ LC +++ E E + + +
Sbjct: 246 CKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTV 305
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKS-KCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
T ++++G C V +A ++ I + ++ Y ++ L K ++ A LF+
Sbjct: 306 VTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFE 365
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M +KG PD ++D + + EAL + +M G ++ Y SL+ L
Sbjct: 366 QMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCN 425
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKM-----ST 431
+++ +L+EM + P+E+ + LKK E+ + E +E M ++
Sbjct: 426 QLQKARSFLEEMIGE--GIHPDEV---LCISVLKKHYELGCINEAVELQSYLMKHQLLTS 480
Query: 432 DTYNVILKLYVN 443
D N + +Y++
Sbjct: 481 DNDNALPNIYLD 492
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 158/326 (48%), Gaps = 11/326 (3%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+++++ L R+RRF + + + + NE + L+ Y AH+VE+ I +F +
Sbjct: 84 YSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYGKAHLVEKGIELFHQMP 143
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM--NIILNGWCVLGNV 273
F L +F LL L A F+ + E G+ ++ NI++ GW G
Sbjct: 144 SFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQ-QAYEMGFRPNSVSYNIMIKGWIKKGGW 202
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
+A + ++++ +P VTY + + L +KG++ TAL LF+ M EKG P+ VT +
Sbjct: 203 EQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYALL 262
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
++ CF + EA +++ +M+ GC Y L+ HL K ++ + L+EM+++
Sbjct: 263 MEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRL 322
Query: 394 SCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
P+ +T+N L+ L K +V VL +M+ GC + TY +++ Y N D
Sbjct: 323 K--PDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGDFDGA 380
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGL 476
M G P +++ ++ GL
Sbjct: 381 MKILNAMLMSGHYPHLKTFASLVVGL 406
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 12/289 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFD---EMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
FN +L+ L +F + ++F EM N +Y I++ + E+A +FD
Sbjct: 154 FNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEML 213
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFE--SEKNEFGYDIKTMNIILNGWCVLGNV 273
E G + + + L LCR ++ A F+ +EK + T +++ GWC +G
Sbjct: 214 EKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKGHHPNAV-TYALLMEGWCFIGKY 272
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EAK+ D+ C+ V Y + L K G + L M ++ KPDVVT N +
Sbjct: 273 KEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNIL 332
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
++ LC + ++ +A +VL +M+ GC PN TY +I C + + L+ M
Sbjct: 333 VNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGH 392
Query: 394 SCLPNEITFNYLLKSLKKPEE----VPWVLERMERNGCKMSTDTYNVIL 438
P+ TF L+ L K E V +VLE ME+ + +T+ +++
Sbjct: 393 --YPHLKTFASLVVGLLKGENNDDYVCFVLEEMEKRQLRFDAETWRILI 439
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 135/302 (44%), Gaps = 6/302 (1%)
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNI-IL 264
EA+ +F+ E G ++ +L+ L R + E ET +N +T+ + ++
Sbjct: 64 EALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALI 123
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+ V + + + C ++ +N L + A +FQ +E G +
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFR 183
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P+ V+ N +I K +A + EM +G P+V TYNS + LC+ M+T
Sbjct: 184 PNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCL 243
Query: 385 LDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
M +K PN +T+ L++ + K +E ++ ME +GCK+ Y V++
Sbjct: 244 FKNMTEKGHH--PNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHL 301
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
D++ EM+K+ + PD +Y ++++ L +G++ DA +M++ G P
Sbjct: 302 GKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNA 361
Query: 502 RT 503
T
Sbjct: 362 AT 363
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 5/200 (2%)
Query: 311 ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
AL LF+ EKG K + + +I L +R +L ++NR N T + +LI+
Sbjct: 65 ALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQ 124
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLERMERNGC 427
H K +E E +M N C +FN LL +L ++ + ++ G
Sbjct: 125 HYGKAHLVEKGIELFHQMPSFN--CFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGF 182
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ ++ +YN+++K ++ ++ + ++EM +KG+ P +Y + L KG ++ AL
Sbjct: 183 RPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALC 242
Query: 488 YFHEMRLKGMVPEPRTGILV 507
F M KG P T L+
Sbjct: 243 LFKNMTEKGHHPNAVTYALL 262
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 167/382 (43%), Gaps = 21/382 (5%)
Query: 141 TFFKWVSREGDYSPG----SNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
T + S +YS G N F A++ L +F + + M V E +
Sbjct: 31 TLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLT 90
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNE 252
+ Y H +AI VF + ++F ++ + L HV+ A F+ E +
Sbjct: 91 ICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKG 150
Query: 253 FGYDIKTMNIILNGWCVLGNVYE-AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ ++NI++ C E A R ++++ C+PDS TY T +N L K GK+ A
Sbjct: 151 IPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQA 210
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L M EKG P VV+ +I LC + EA+E+L EM G PNV TY+SL+
Sbjct: 211 KELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDG 270
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCK 428
LCK E L+ M ++ LPN +T++ L+ L K E +L+RM G K
Sbjct: 271 LCKSGHSSQAMELLEVMVRRR--LLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLK 328
Query: 429 MSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT-------VMIHGLYDKGR 481
Y I+ + + +EM G+ P++ S+T +++ GL +
Sbjct: 329 PDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVD 388
Query: 482 LEDALSYFHEMRLKGMVPEPRT 503
A + MR +G+ E T
Sbjct: 389 PTRAFQLYLSMRTRGISVEIGT 410
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 159/386 (41%), Gaps = 48/386 (12%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMV 204
++ D +VF I GR R ++ I+VF +M D +K+Y + + + V
Sbjct: 77 KQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHV 136
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGY-DIKTMNI 262
+ AIG + +E G + + L+ LC+ + VE A F N D T
Sbjct: 137 KRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGT 196
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++NG C LG + +AK ++ + P V+Y + ++ L + L A+ L + M G
Sbjct: 197 LINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIING 256
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+P+V T + ++D LC +A+E+L M R LPN+ TY++LI LCK +
Sbjct: 257 IEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAV 316
Query: 383 EYLDEM---------------------------------EQKNGSCLPNEITFNYLLKSL 409
E LD M E G PN ++ + +K
Sbjct: 317 EILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMH 376
Query: 410 K----------KPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
P + M G + T++ ++K + +K EEM
Sbjct: 377 NMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMIL 436
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDA 485
G PD+ + V++ GL+D+ ++ +
Sbjct: 437 DGCIPDEGMWNVLMCGLWDRKKVRET 462
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 106/258 (41%), Gaps = 18/258 (6%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E SP + +++ L ++ E I++ +EM P++ TY L++ +
Sbjct: 219 EKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVF---TYSSLMDGLCKSG 275
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRY-KHVEVAETFFESEKNEFGYDIKTMN 261
+A+ + + L ++ + L+ LC+ KH E E D
Sbjct: 276 HSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYG 335
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA-------TFVNALTKKGKLGTALRL 314
I++G C N EA F ++ P+ ++ V L A +L
Sbjct: 336 RIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQL 395
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+ +M +G ++ T +C++ C + + +A +L EM GC+P+ +N L+ L
Sbjct: 396 YLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWD 455
Query: 375 IKRMETVYEYL-DEMEQK 391
K++ E L E++QK
Sbjct: 456 RKKVRETTELLVAELKQK 473
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 200/433 (46%), Gaps = 53/433 (12%)
Query: 123 DLIVNV-INRYR-FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
DL+++V ++R + A F++++ +G + P +L L +A + VF+
Sbjct: 245 DLLIHVYCTQFRNVGFRNAIGVFRFLANKGVF-PTVKTCTFLLSSLVKANELEKSYWVFE 303
Query: 181 EMPDLVNEKTY--GILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
M V+ Y +N + VE+AI +F ++ G ++ + NL+ LC++ +
Sbjct: 304 TMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGN 363
Query: 239 VEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
++ A F E K+ + T ++++NG L EA K+ ++ P+ V Y T
Sbjct: 364 LDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNT 423
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
++ K G LG ALR+ M KG P+ VT N II C ++ +A +L EM +RG
Sbjct: 424 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 483
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN-------------GSCL-------- 396
N + ++I LC R E+ +L EM +N G C
Sbjct: 484 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 543
Query: 397 ------------PNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLY 441
N +T N L+ L K +E +L++M G + TYN ++
Sbjct: 544 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS-- 601
Query: 442 VNWDC--EDKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
C E KV ++ EM K+G+ PD +Y ++IHG+ G+L++A++ ++E + +
Sbjct: 602 ---GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRD 658
Query: 497 MVPEPRT-GILVN 508
+VP T G++++
Sbjct: 659 LVPNVYTYGVMID 671
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 142/308 (46%), Gaps = 37/308 (12%)
Query: 233 LCR-YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
LC+ KH + E +F + FG ++ T N +++G C GN+ EA R K +++ D
Sbjct: 533 LCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLD 592
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
+TY T ++ K+GK+ +L M ++G +PD T N +I +C ++ EA+ +
Sbjct: 593 KITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWN 652
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRME------------------TVYEYLDEMEQKNG 393
E K+R +PNV TY +I CK ++E VY L +NG
Sbjct: 653 ECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNG 712
Query: 394 SCL---------------PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYN 435
+ + P T++ L+ + + E+ +++ M + G + Y
Sbjct: 713 NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYT 772
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
++ Y DKV + +EM + P++ +YTVMI G G ++ A HEM K
Sbjct: 773 ALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 832
Query: 496 GMVPEPRT 503
G+VP+ T
Sbjct: 833 GIVPDTVT 840
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 164/381 (43%), Gaps = 40/381 (10%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
++ +++ L + +F E V E + NE Y L++ Y + +A+ +
Sbjct: 386 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 445
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVY 274
G + +++ C+ +E AE E + F + I++ C+
Sbjct: 446 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 505
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
A RF ++++ P+ T V L K+GK A+ L+ + EKG ++VT N +I
Sbjct: 506 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 565
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK--- 391
LC + EA+ +L++M RG + + TYN+LI CK ++E ++ EM ++
Sbjct: 566 HGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 625
Query: 392 ----------NGSC--------------------LPNEITFNYLLKS---LKKPEEVPWV 418
+G C +PN T+ ++ K EE +
Sbjct: 626 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 685
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+ ++++ YN +++ Y + ++M KG+ P +Y+ +IHG+ +
Sbjct: 686 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN 745
Query: 479 KGRLEDALSYFHEMRLKGMVP 499
GR+EDA EMR +G++P
Sbjct: 746 IGRMEDAKCLIDEMRKEGLLP 766
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 136/306 (44%), Gaps = 10/306 (3%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
N T L++ ++EA+ + + E G + D + L+ C+ VE E F
Sbjct: 556 ANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE--EGF 613
Query: 246 ---FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
E K D T N++++G C +G + EA W + P+ TY ++
Sbjct: 614 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 673
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K K+ +LF + + + + V N +I A C EA ++ +M+++G P
Sbjct: 674 CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTT 733
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVL 419
TY+SLI +C I RME +DEM ++ LPN + + L+ L + ++V VL
Sbjct: 734 ATYSSLIHGMCNIGRMEDAKCLIDEMRKE--GLLPNVVCYTALIGGYCKLGQMDKVVNVL 791
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+ M + TY V++ Y EM KG+ PD +Y V+ +G +
Sbjct: 792 QEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 851
Query: 480 GRLEDA 485
G++E+
Sbjct: 852 GKIEEG 857
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 106/231 (45%), Gaps = 6/231 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMP--DLV-NEKTYGILLNRYAAAHMVEEAIGV 210
P + +N ++ + R + E + +++E DLV N TYG++++ Y A +EE +
Sbjct: 626 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 685
Query: 211 F-DRRKEFGELDDLSAFQNLLLWLCRYKH-VEVAETFFESEKNEFGYDIKTMNIILNGWC 268
F + + EL+ + + L+ CR + VE + + T + +++G C
Sbjct: 686 FTELLTQNLELNSV-VYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMC 744
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
+G + +AK ++ K P+ V Y + K G++ + + Q M P+ +
Sbjct: 745 NIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI 804
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
T +ID + A ++L EM +G +P+ TYN L CK ++E
Sbjct: 805 TYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 855
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 100/232 (43%), Gaps = 6/232 (2%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
T T +L+++ + R EA + + SR D P + ++D +A + E ++
Sbjct: 628 TFTYNLLIHGMCRIGKLDEAVNLWNECKSR--DLVPNVYTYGVMIDGYCKADKIEEGEKL 685
Query: 179 FDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
F E+ +N Y L+ Y EA + D + G + + +L+ +C
Sbjct: 686 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN 745
Query: 236 YKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+E A+ + + E ++ ++ G+C LG + + +++ P+ +T
Sbjct: 746 IGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKIT 805
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
Y ++ +K G + TA +L M KG PD VT N + + C + +I E
Sbjct: 806 YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 174/402 (43%), Gaps = 35/402 (8%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR-------------- 168
DL V V++ +R A F+W + + VF AIL++L +
Sbjct: 388 DLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERV 447
Query: 169 ----ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
R V+++ + + V+ K +L+ Y+ MVE+ + VFD+ + D+
Sbjct: 448 INANMHRIVDVL-IGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVK 506
Query: 225 AFQNLLLWL----CRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKR 278
+L L K VEV T EFG I T N +L+ +C G V +
Sbjct: 507 NCNRILRILRDKDLMSKAVEVYRTM-----GEFGIKPTIVTYNTLLDSYCKGGKVQQGLD 561
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
++ + C P+ VTY +N L+KKG+ A L M + G K T N +I
Sbjct: 562 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 621
Query: 339 FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN 398
K + EAL + EM +G P V TYNS I LCK+ RM + L +M N LP+
Sbjct: 622 NKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN--LLPD 679
Query: 399 EITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE 455
+++N L+ L + + + + + TYN +L + +
Sbjct: 680 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 739
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
EM +G+ PD +YT++++G G L A +F EM +G+
Sbjct: 740 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 781
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 5/201 (2%)
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
+KK + L +F M + PDV CN I+ L K + +A+EV R M G P +
Sbjct: 481 SKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTI 540
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVL 419
TYN+L+ CK +++ + L EM+++ C PN++T+N L+ L K E+ ++
Sbjct: 541 VTYNTLLDSYCKGGKVQQGLDLLSEMQRRG--CAPNDVTYNVLINGLSKKGEFEQAKGLI 598
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
M + G K+S TYN ++ Y N + EEM KG P +Y I+GL
Sbjct: 599 GEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKL 658
Query: 480 GRLEDALSYFHEMRLKGMVPE 500
GR+ DA+ +M ++P+
Sbjct: 659 GRMSDAMQQLSDMLANNLLPD 679
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 10/207 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N+ + L + R + +Q +M PD+V +Y L+ Y + +
Sbjct: 642 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV---SYNTLIYGYCRLGNLMK 698
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILN 265
A +FD + + + LL LCR +EVA+ NE DI T I++N
Sbjct: 699 AFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 758
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C +G++ A+ F+ +++ E DS YAT + K G A L + M KG P
Sbjct: 759 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP 818
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLRE 352
D++ N ++D LC + EA E+L++
Sbjct: 819 DLIIYNVVVDGLCKLGNLEEASELLQK 845
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 122/278 (43%), Gaps = 6/278 (2%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIG 209
+P +N +++ L + F + + EM V+ TY L+ Y ++ EA+
Sbjct: 572 APNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALS 631
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWC 268
+ + G ++ + + + LC+ + A + + N D+ + N ++ G+C
Sbjct: 632 LQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYC 691
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
LGN+ +A + ++ P VTY T ++ L ++G+L A +L M +G PD+V
Sbjct: 692 RLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 751
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T +++ C + A E EM + G + Y + I K+ + +EM
Sbjct: 752 TYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEM 811
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNG 426
K P+ I +N ++ L K + E ++++G
Sbjct: 812 LAKGFP--PDLIIYNVVVDGLCKLGNLEEASELLQKDG 847
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 197/455 (43%), Gaps = 67/455 (14%)
Query: 126 VNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL 185
V+ + D A F W+S+ ++ + + ++L ++ + + ++P
Sbjct: 71 VSSLFSLNLDPHTALQFSYWISQTPNFKHNVDSYASLLTLIDHHK-------IVSDVPK- 122
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELD----DLSAFQNLLLWLCRYKHVEV 241
I+++ + +A+ V D ++ + D L + LL L R+ V+
Sbjct: 123 -------IIVSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDE 175
Query: 242 AETFFESEKNEF-GYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ EF DI T N+++N +C +G V EAK+F +I++ PD T +F+
Sbjct: 176 MNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFIL 235
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
+ + +A R+F+ M + V+ N +I LC RI EA+ + MK+ C P
Sbjct: 236 GYCRSKDVDSAFRVFEEMPNRNE----VSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYP 291
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN---------------YL 405
NV TY +LIK LC+ K + LDEM ++N +P+ IT+N Y
Sbjct: 292 NVYTYTALIKGLCR-KNVHKAMGLLDEMLERN--LVPDLITYNSLIAGQCRAGHLDSAYR 348
Query: 406 LKSLKKP-----------------------EEVPWVLERMERNGCKMSTDTYNVILKLYV 442
L SL K EE + + + G + Y+V++ Y
Sbjct: 349 LLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYC 408
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPR 502
D+ +E+M K P+ ++ +IHGL G L++ALS F +M G+ P
Sbjct: 409 KVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVY 468
Query: 503 T-GILVNDMNIKLKERGEQGKKVIKLTSLGLKGNA 536
T IL+ M +K + + K + K+ S G K A
Sbjct: 469 TFNILIGRM-LKQGDFDDAHKCLQKMMSSGEKPVA 502
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 179/379 (47%), Gaps = 16/379 (4%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG--RARRFVELIQV 178
T +L++NV + F EA K + + SP + F + +LG R++ +V
Sbjct: 194 TFNLMINVYCKMGFVKEAKQFMCKMI--QAGLSP--DYFTSTSFILGYCRSKDVDSAFRV 249
Query: 179 FDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
F+EMP+ NE +Y L++ A ++EA+ +F R K+ ++ + L+ LCR K+
Sbjct: 250 FEEMPNR-NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KN 307
Query: 239 VEVAETFFES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
V A + E+N D+ T N ++ G C G++ A R + + PD TY
Sbjct: 308 VHKAMGLLDEMLERN-LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYG 366
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
F++ L K ++ A RLF ++ E+G +V+ + +ID C ++ EA + +M ++
Sbjct: 367 CFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSK 426
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---E 413
C PN T+N+LI LC ++ D+M + P TFN L+ + K +
Sbjct: 427 NCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLK--PTVYTFNILIGRMLKQGDFD 484
Query: 414 EVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
+ L++M +G K TYN +++Y + + +M+++G+ PD +YT +I
Sbjct: 485 DAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLI 544
Query: 474 HGLYDKGRLEDALSYFHEM 492
G A M
Sbjct: 545 KAYGKLGLTYSAFDVLKSM 563
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 164/368 (44%), Gaps = 11/368 (2%)
Query: 166 LGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
L A R + L++ +PD ++TYG ++ ++ VEEA +FD E G ++
Sbjct: 343 LDSAYRLLSLMKERGLVPD---QRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIM 399
Query: 226 FQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDI 283
+ L+ C+ V+ A FE KN + T N +++G C GN+ EA + +
Sbjct: 400 YSVLIDGYCKVGKVDEAGCLFEKMLSKN-CSPNAYTFNALIHGLCSAGNLKEALSLFDQM 458
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
+K +P T+ + + K+G A + Q M G KP T N I+ C ++
Sbjct: 459 VKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKV 518
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
EA +++ +MK G P+ TY SLIK K+ + ++ L M + C P+ TF
Sbjct: 519 QEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSM--FDADCEPSHHTFL 576
Query: 404 YLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMG 463
L+K L +V+E+ G + ++ +V D V +EEMEK G
Sbjct: 577 SLIKQLFDKR---YVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCT 633
Query: 464 PDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKK 523
PD + Y +I G+ L AL +M+ +G+ P V KL++ GE
Sbjct: 634 PDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANI 693
Query: 524 VIKLTSLG 531
V + G
Sbjct: 694 VEDMICSG 701
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 110/527 (20%), Positives = 204/527 (38%), Gaps = 102/527 (19%)
Query: 68 QLVHSLANS---DEK-SEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDD 123
QL+H L + DE S F R D NV + + KA+ + L +
Sbjct: 263 QLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGLLDEMLERN 322
Query: 124 LIVNVINRYRF--------DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVEL 175
L+ ++I ++AY + G P + +D L ++ R E
Sbjct: 323 LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERG-LVPDQRTYGCFIDFLCKSNRVEEA 381
Query: 176 IQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
++FD + + N Y +L++ Y V+EA +F++ + F L+
Sbjct: 382 RRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHG 441
Query: 233 LCRYKHVEVAETFFES------EKNEFGYDI----------------------------- 257
LC +++ A + F+ + + ++I
Sbjct: 442 LCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPV 501
Query: 258 -KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+T N + +C G V EA+ + + PD TY + + A K G +A + +
Sbjct: 502 ARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLK 561
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKR-------------------IPEA----------- 346
+M++ +P T +I L F KR +P +
Sbjct: 562 SMFDADCEPSHHTFLSLIKQL-FDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIV 620
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
+E+ EM+ GC P+ Y LI +CK++ + + LD+M+++ S P+E+ FN ++
Sbjct: 621 IELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGIS--PSEMVFNAVI 678
Query: 407 KS---LKKPEEVPWVLERMERNG-------CKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
L+K E ++E M +G CK +I LY + E + +++
Sbjct: 679 SCCCKLQKYGEAANIVEDMICSGHSPQLEHCK------TLICGLYEEGETE-RGNSVFKK 731
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ G D+ ++ ++I G+ +G +E+ F EM G PRT
Sbjct: 732 LRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRT 778
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 140/370 (37%), Gaps = 71/370 (19%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGI 193
EA F K +S+ + SP + FNA++ L A E + +FD+M + T+ I
Sbjct: 415 EAGCLFEKMLSK--NCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNI 472
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE- 252
L+ R ++A + GE + + C V+ AE K E
Sbjct: 473 LIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEG 532
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL-------TKK 305
D T ++ + LG Y A K + + CEP T+ + + L K
Sbjct: 533 VPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKS 592
Query: 306 GKLGT----------------------ALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
G+ G + LF+ M + G PD +I +C + +
Sbjct: 593 GETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENL 652
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM--------------- 388
AL++L +M+ G P+ +N++I CK+++ +++M
Sbjct: 653 GIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTL 712
Query: 389 --------EQKNGSCL----------PNEITFNYLLKSLKKP---EEVPWVLERMERNGC 427
E + G+ + +EI + L+ + K EE + E ME+NGC
Sbjct: 713 ICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGC 772
Query: 428 KMSTDTYNVI 437
S TY+++
Sbjct: 773 NFSPRTYSIL 782
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 175/399 (43%), Gaps = 35/399 (8%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKT 190
E A+ F+ + G +P + ++D +A + +F+EM P +V T
Sbjct: 305 EKAFLLFQEMKMVG-VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVV---T 360
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-------- 242
Y L++ Y A V +A +F R + G + + L+ LC+ ++ A
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 420
Query: 243 --------ETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+ +F E ++ ++ T +++G C V A ++ S CEP+ +
Sbjct: 421 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 480
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
Y ++ K GK+ +A +F M + G P V T +ID + R+ A++VL +M
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE 413
C PNV TY ++I LC+I E + L ME+K C PN +T+ L+ L K
Sbjct: 541 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG--CSPNVVTYTALIDGLGKAG 598
Query: 414 EVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
++ L+ +M R GC + TY V++ DK R EM++ + Y
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYR 658
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVP-EPRTGILVN 508
I G + K + +L EM G VP P G+L++
Sbjct: 659 CAIQG-FSKSFIA-SLGILEEMESYGTVPIAPVYGMLID 695
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 160/368 (43%), Gaps = 34/368 (9%)
Query: 171 RFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLS 224
+F + Q+ EM PD TY ++ A VE+A +F K G D+
Sbjct: 268 KFDKAFQLIKEMMRKGFVPD---TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324
Query: 225 AFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKD 282
+ L+ C+ +E A+ FE E G + T +++ + V +A +
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFE-EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 383
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK----------------PD 326
++ + C P+ VTY V+ L K G + A ++ + P+
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
VVT ++D LC ++ A E+L M + GC PN Y++LI CK ++++ E
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 387 EMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVN 443
+M K G LP+ T+ L+ + K + VL +M ++ C + TY ++
Sbjct: 504 QM-TKCGY-LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+K ME+KG P+ +YT +I GL G+++ +L F +M KG P T
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621
Query: 504 -GILVNDM 510
+L+N +
Sbjct: 622 YRVLINHL 629
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 137/325 (42%), Gaps = 20/325 (6%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
N TYG L++ AH V+ A + D G + + L+ C+ ++ A E F
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ K + + T +++ G + A + ++K C P+ VTY ++ L +
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G+ AL+L M EKG P+VVT +ID L +I +L++ +M +GC PN TY
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEIT-FNYLLKSLKKPEEVPW-VLERME 423
LI HLC ++ L EM+Q P + + ++ K +LE ME
Sbjct: 623 RVLINHLCAAGLLDKARLLLGEMKQTY---WPKYLQGYRCAIQGFSKSFIASLGILEEME 679
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEME--------KKGMGPDQRSYTVMIHG 475
G Y +++ DC K ME + D Y +I
Sbjct: 680 SYGTVPIAPVYGMLI------DCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQA 733
Query: 476 LYDKGRLEDALSYFHEMRLKGMVPE 500
L ++E+A + EM +G VPE
Sbjct: 734 LCLASQVEEAFRLYSEMTRRGFVPE 758
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 168/430 (39%), Gaps = 81/430 (18%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVN--EKTYG 192
D+ AY ++ G PG V+N + + + PDL++ EK YG
Sbjct: 192 DYAYAYKLLNRMTTCG-CPPGYVVYNIFIGSICGQEKLPS--------PDLLDLAEKIYG 242
Query: 193 ------ILLNRYAAAHMVEEAIGVFDRRKEF---------GELDDLSAFQNLLLWLCRYK 237
+LN+ A+ GV K F G + D S + ++ +LC
Sbjct: 243 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 302
Query: 238 HVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 297
VE A F+ ++K + + PD TY
Sbjct: 303 KVEKAFLLFQ--------EMKMVGV--------------------------TPDVYTYTI 328
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+++ K G + A LF+ M G P VVT +I A K++P+A ++ M + G
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC--------------LPNEITFN 403
C PN TY +L+ LCK + +E ++ + S PN +T+
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448
Query: 404 YLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
L+ L K +V +L+ M +GC+ + Y+ ++ + D + + +M K
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 508
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQ 520
G P +YT +I ++ GRL+ A+ +M P T + D ++ E
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGES--- 565
Query: 521 GKKVIKLTSL 530
+K +KL SL
Sbjct: 566 -EKALKLLSL 574
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 147/354 (41%), Gaps = 11/354 (3%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY L+ ++A V+ V E G D LC K A+ E
Sbjct: 42 TYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALC--KEGRWADALDMIE 99
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+ +F D +++G EA F + + C P+ VTY T ++ KK +LG
Sbjct: 100 REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLG 159
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
R+ M +G P+ N ++ + C +K A ++L M GC P YN I
Sbjct: 160 WCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFI 219
Query: 370 KHLCKIKRMETVYEYLDEMEQKNG-----SCLPNEI---TFNYLLKSLKKPEEVPWVLER 421
+C +++ + + LD E+ G +C+ N++ F L + K ++ +++
Sbjct: 220 GSICGQEKLPSP-DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 278
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
M R G T TY+ ++ + +K ++EM+ G+ PD +YT++I G
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338
Query: 482 LEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKGN 535
+E A F EMR G P T + +K K+ + ++ G + N
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 108/296 (36%), Gaps = 78/296 (26%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR------- 342
P VTY V L+ G++ R+ + M E G D T C ALC + R
Sbjct: 38 PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDM 97
Query: 343 -------------------------IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
EA+ L M+ C+PNV TY +L+ K K+
Sbjct: 98 IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 157
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTY 434
+ ++ M + C PN FN L+ S ++ + +L RM GC Y
Sbjct: 158 LGWCKRIINMMMTEG--CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 215
Query: 435 NVIL-------------------KLY---VNWDCE-------------------DKVRHT 453
N+ + K+Y + +C DK
Sbjct: 216 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 275
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
+EM +KG PD +Y+ +I L ++E A F EM++ G+ P+ T ++ D
Sbjct: 276 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 99/236 (41%), Gaps = 18/236 (7%)
Query: 153 SPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIG 209
+P + A++D L G + + ++L+ + +E N TY L++ A ++ ++
Sbjct: 546 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLD 605
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF------GYDIKTMNII 263
+F + G + ++ L+ LC ++ A K + GY
Sbjct: 606 LFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFS 665
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE--K 321
+ LG + E + + P + Y ++ +K G+L A+ L + M E
Sbjct: 666 KSFIASLGILEEMESYGT-------VPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPS 718
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
K D +I ALC ++ EA + EM RG +P ++ + LIK L ++K+
Sbjct: 719 SVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKK 774
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 22/218 (10%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP + A++D LG+A + + +F +M P+ V TY +L+N AA ++++
Sbjct: 581 SPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV---TYRVLINHLCAAGLLDK 637
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE---VAETFFESEKNEFGYD--IKTMN 261
A R GE+ + L + C + +A E +G
Sbjct: 638 A------RLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYG 691
Query: 262 IILNGWCVLGNVYEAKRFWKDI--IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
++++ + G + A K++ + S + D+ YA+ + AL ++ A RL+ M
Sbjct: 692 MLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 751
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+G P++ C+I L K+ EAL++ + + G
Sbjct: 752 RRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 789
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 157/324 (48%), Gaps = 9/324 (2%)
Query: 186 VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETF 245
V+ Y LLN ++V+EA+ +F E + D+ +F L+ LCR ++ A F
Sbjct: 177 VSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEF 236
Query: 246 FESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWK-DIIKSKCEPDSVTYATFVNAL 302
F++ N FG DI + N ++NG+C + + + K D++ PD +TY + ++
Sbjct: 237 FQNMGN-FGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGY 295
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K G + A LF M G KP+ T N +ID + A+ + +M GCLP+V
Sbjct: 296 CKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVL 419
T+ SLI C+ + + +EM+ +N S PN T+ L+ +L K E L
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS--PNVYTYAVLINALCKENRIREARNFL 413
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
++ + YN ++ + D+ EM++K PD+ ++T++I G K
Sbjct: 414 RHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMK 473
Query: 480 GRLEDALSYFHEMRLKGMVPEPRT 503
GR+ +A+S F++M VP+ T
Sbjct: 474 GRMVEAISTFYKMIEINCVPDEIT 497
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 148/318 (46%), Gaps = 9/318 (2%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESE 249
TY +L+ + + A VFD + G L D S + L+ R ++ A+ F +E
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFL-NE 169
Query: 250 KNEFGYDIKTM--NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ +G + N +LN V EA +++ ++ PD ++ + L + G+
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE-MKNRGCLPNVTTYN 366
+ A FQ M G PD+V+ N +I+ C I + ++L+E M +G P+V TY
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 289
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERME 423
S+I CK+ M+ E DEM PN+ TFN L+ K + + E+M
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIK--PNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
GC T+ ++ Y ++ WEEM+ + + P+ +Y V+I+ L + R+
Sbjct: 348 LLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIR 407
Query: 484 DALSYFHEMRLKGMVPEP 501
+A ++ ++ +VP+P
Sbjct: 408 EARNFLRHLKSSEVVPKP 425
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 117/275 (42%), Gaps = 8/275 (2%)
Query: 235 RYKHVEVAETFFESEKNEFG--YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
R+ + FFE + + T ++++ C +G AK + + PDS
Sbjct: 85 RFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDS 144
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
V++ + GKL +A + G K N +++ L + + EA+ + RE
Sbjct: 145 SILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFRE 204
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
+P+V ++N LI+ LC+I ++ +E+ M N C P+ +++N L+ +
Sbjct: 205 HLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM--GNFGCFPDIVSYNTLINGFCRV 262
Query: 413 EEVP----WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
E+ + E M G TY I+ Y ++EM G+ P+ +
Sbjct: 263 NEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFT 322
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ V+I G G + A+ + +M L G +P+ T
Sbjct: 323 FNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVT 357
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ T +++G+C G V + + W+++ P+ TYA +NAL K+ ++ A
Sbjct: 354 DVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFL 413
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
+ + P N +ID C ++ EA ++ EM+ + C P+ T+ LI C
Sbjct: 414 RHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMK 473
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK 411
RM +M + N C+P+EIT N L+ L K
Sbjct: 474 GRMVEAISTFYKMIEIN--CVPDEITINSLISCLLK 507
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 84/226 (37%), Gaps = 40/226 (17%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLV-- 186
D +AA F + G P FN ++D G+ + ++++M PD+V
Sbjct: 300 DMKAASELFDEMVSSG-IKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTF 358
Query: 187 ------------------------------NEKTYGILLNRYAAAHMVEEAIGVFDRRKE 216
N TY +L+N + + EA K
Sbjct: 359 TSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKS 418
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
+ + ++ C+ V+ A E ++ + D T I++ G C+ G + E
Sbjct: 419 SEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVE 478
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
A + +I+ C PD +T + ++ L K G A ++ QA +K
Sbjct: 479 AISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,325,636,027
Number of Sequences: 23463169
Number of extensions: 350223062
Number of successful extensions: 975418
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5536
Number of HSP's successfully gapped in prelim test: 4767
Number of HSP's that attempted gapping in prelim test: 829332
Number of HSP's gapped (non-prelim): 61168
length of query: 536
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 388
effective length of database: 8,886,646,355
effective search space: 3448018785740
effective search space used: 3448018785740
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)