BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048749
(536 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LIL5|PP233_ARATH Putative pentatricopeptide repeat-containing protein At3g15200
OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1
Length = 523
Score = 548 bits (1411), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/492 (54%), Positives = 352/492 (71%), Gaps = 13/492 (2%)
Query: 25 QLTTQFSKLQSCNSVTSHKTLIPIINLQARN----SEFLFLGRIETAQLVHSLANSDE-K 79
QL + S+ + +S+ + + P +N S F FLG +HSL D+
Sbjct: 12 QLQSALSR-RRISSLVDFRRVFPPETPNHKNNITLSRFHFLG----THFLHSLGAPDKFP 66
Query: 80 SEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAA 139
+ F + A++V NI+K S+ +I++ L++C + LT++L++ V+NR R DW+ A
Sbjct: 67 NRFNDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPA 126
Query: 140 YTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLN 196
Y + V ++ + S ++N ILDVLG+ RRF E QVFDEM VNEKTY +LLN
Sbjct: 127 YILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLN 186
Query: 197 RYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD 256
RYAAAH V+EA+GVF+RRKEFG DDL AF LL+WLCRYKHVE AET F S + EFG D
Sbjct: 187 RYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCD 246
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
IK MN+ILNGWCVLGNV+EAKRFWKDII SKC PD V+Y T +NALTKKGKLG A+ L++
Sbjct: 247 IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYR 306
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
AMW+ R PDV CN +IDALCFKKRIPEALEV RE+ +G PNV TYNSL+KHLCKI+
Sbjct: 307 AMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIR 366
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNV 436
R E V+E ++EME K GSC PN++TF+YLLK ++ ++V VLERM +N C+M++D YN+
Sbjct: 367 RTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNL 426
Query: 437 ILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKG 496
+ +LYV WD E+KVR W EME+ G+GPDQR+YT+ IHGL+ KG++ +ALSYF EM KG
Sbjct: 427 MFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Query: 497 MVPEPRTGILVN 508
MVPEPRT +L+N
Sbjct: 487 MVPEPRTEMLLN 498
>sp|Q9LFQ4|PP383_ARATH Pentatricopeptide repeat-containing protein At5g15010,
mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2
SV=2
Length = 572
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 239/412 (58%), Gaps = 9/412 (2%)
Query: 94 VQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS 153
+ ++K C S + E+ L +C++ +++L+V +++R R DWE A+TFF W ++ Y
Sbjct: 100 ISKLVKDCG-SDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYV 158
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAAHMVEEAIG 209
+++++ +LG+ R+F + DEM P LVN +T I++ +Y A H V +AI
Sbjct: 159 RSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAIN 218
Query: 210 VFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC- 268
F K F + FQ+LL LCRYK+V A K+++ +D K+ NI+LNGWC
Sbjct: 219 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCN 278
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
V+G+ EA+R W ++ + D V+Y++ ++ +K G L L+LF M ++ +PD
Sbjct: 279 VIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRK 338
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKN-RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
N ++ AL + EA +++ M+ +G PNV TYNSLIK LCK ++ E + DE
Sbjct: 339 VYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 398
Query: 388 MEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
M +K P T++ ++ L+ EEV +L +M + GC+ + +TY ++++ W
Sbjct: 399 MLEKG--LFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDF 456
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D V W+EM++K +GPD SY VMIHGL+ G++E+A Y+ EM+ KGM P
Sbjct: 457 DNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRP 508
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+++++ + +++++FD M PD K Y +++ A A V EA +
Sbjct: 305 YSSMISCYSKGGSLNKVLKLFDRMKKECIEPD---RKVYNAVVHALAKASFVSEARNLMK 361
Query: 213 R-RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWCV 269
+E G ++ + +L+ LC+ + E A+ F+ EK F I+T + + +
Sbjct: 362 TMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFP-TIRTYHAFMR---I 417
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
L E + K CEP TY + L + L L+ M EK PD+ +
Sbjct: 418 LRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSS 477
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+I L +I EA +EMK++G PN
Sbjct: 478 YIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 121/295 (41%), Gaps = 43/295 (14%)
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDI---KTMNIILNGWCVLG 271
K+ G + + + +++ L + + + A T + E +F + +T+ I++ +C +
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLID-EMRKFSPSLVNSQTLLIMIRKYCAVH 211
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP-DVVTC 330
+V +A + + K E + + ++AL + + A L K + P D +
Sbjct: 212 DVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSF 269
Query: 331 NCIIDALCFKKRIP-EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +++ C P EA V EM N G +V +Y+S+I
Sbjct: 270 NIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMI-------------------- 309
Query: 390 QKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDK 449
SC + N +LK + +RM++ + YN ++ +
Sbjct: 310 ----SCYSKGGSLNKVLK----------LFDRMKKECIEPDRKVYNAVVHALAKASFVSE 355
Query: 450 VRHTWEEMEK-KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
R+ + ME+ KG+ P+ +Y +I L + E+A F EM KG+ P RT
Sbjct: 356 ARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRT 410
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 219/419 (52%), Gaps = 12/419 (2%)
Query: 89 EIAINVQNILKTCSV-----STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFF 143
E + N + + + C V + +E L++ +L L+ DLIV V+ R+R + A+ FF
Sbjct: 123 ESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFF 182
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAA 201
W + ++ S +N+++ +L + R+F ++ V +EM L+ +T+ I + +AAA
Sbjct: 183 CWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAA 242
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
++A+G+F+ K++ + LL L R K + A+ F+ K F ++ T
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYT 302
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++LNGWC + N+ EA R W D+I +PD V + + L + K A++LF M K
Sbjct: 303 VLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSK 362
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P+V + +I C + + A+E +M + G P+ Y LI K+++TV
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
YE L EM++K P+ T+N L+K + K PE + +M +N + S T+N+I+
Sbjct: 423 YELLKEMQEKGHP--PDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIM 480
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
K Y + R WEEM KKG+ PD SYTV+I GL +G+ +A Y EM KGM
Sbjct: 481 KSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 127/278 (45%), Gaps = 12/278 (4%)
Query: 233 LCRYKHV-EVAETFF--ESEKNEFGYDIKTMNIILNGWCVLGNV--YEAKRFWKDIIKSK 287
L R++H + A FF +E+ F +D +T N +++ +L +E + + +K
Sbjct: 168 LERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMS---ILAKTRQFETMVSVLEEMGTK 224
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
T+ + A + A+ +F+ M + K V T NC++D+L K EA
Sbjct: 225 GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 284
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRM-ETVYEYLDEMEQK-NGSCLPNEITFNYL 405
+ ++K R PN+ TY L+ C+++ + E + D ++Q + + + L
Sbjct: 285 VLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGL 343
Query: 406 LKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L+S KK + + + M+ G + +Y ++++ + + +++M G+ PD
Sbjct: 344 LRSRKKSDAIK-LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
YT +I G + +L+ EM+ KG P+ +T
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKT 440
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 4/160 (2%)
Query: 176 IQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
I+ FD+M D + Y L+ + ++ + +E G D + L+
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 233 LCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
+ K E A + +NE I T N+I+ + + N + W+++IK PD
Sbjct: 448 MANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPD 507
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+Y + L +GK A R + M +KG K ++ N
Sbjct: 508 DNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 110/278 (39%), Gaps = 59/278 (21%)
Query: 284 IKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRI 343
++S+C+ D T + V + T ++ ++ ++ R + V +D I
Sbjct: 107 VESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLD--LSHDLI 164
Query: 344 PEALEVLREMKN------------RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
E LE R + +G + TYNS++ L K ++ ET+ L+EM K
Sbjct: 165 VEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTK 224
Query: 392 NGSCLPNEITFNYLLKSLKKPEE---VPWVLERMERNGCKMSTDTYNVILK--------- 439
L TF +K+ +E + E M++ K+ +T N +L
Sbjct: 225 G---LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGK 281
Query: 440 ---------------------LYVNWDCEDKVRH------TWEEMEKKGMGPDQRSYTVM 472
+ +N C +VR+ W +M +G+ PD ++ VM
Sbjct: 282 EAQVLFDKLKERFTPNMMTYTVLLNGWC--RVRNLIEAARIWNDMIDQGLKPDIVAHNVM 339
Query: 473 IHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVND 509
+ GL + DA+ FH M+ KG P R+ I++ D
Sbjct: 340 LEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 13/255 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P N +L+ L R+R+ + I++F M N ++Y I++ + +E AI
Sbjct: 331 PDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEY 390
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCV 269
FD + G D + + L+ K ++ V E E ++ D KT N ++
Sbjct: 391 FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN 450
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE----KGRKP 325
A R + +I+++ EP T+ N + K + + +A+WE KG P
Sbjct: 451 QKMPEHATRIYNKMIQNEIEPSIHTF----NMIMKSYFMARNYEMGRAVWEEMIKKGICP 506
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D + +I L + + EA L EM ++G + YN + + E ++E L
Sbjct: 507 DDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE-IFEEL 565
Query: 386 DEMEQKNGSCLPNEI 400
+ + +G EI
Sbjct: 566 AQRAKFSGKFAAAEI 580
>sp|Q9M8M3|PP136_ARATH Pentatricopeptide repeat-containing protein At1g80550,
mitochondrial OS=Arabidopsis thaliana GN=At1g80550 PE=2
SV=1
Length = 448
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 206/395 (52%), Gaps = 11/395 (2%)
Query: 125 IVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM-- 182
+ + Y DW+ A FF WV RE + + FN ++D+LG+ F + + M
Sbjct: 50 VCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIG 109
Query: 183 --PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV- 239
+ N T+ I+ RY AH+V+EAI +D+ +F L D ++F NL+ LC +KHV
Sbjct: 110 NTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFN-LRDETSFYNLVDALCEHKHVV 168
Query: 240 EVAETFFESEKNEFGYDI---KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
E E F G+ + K N+IL GW LG + K +WK + D +Y+
Sbjct: 169 EAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYS 228
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+++ + K GK A++L++ M + K DVV N +I A+ + + + V REM+ R
Sbjct: 229 IYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRER 288
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP 416
GC PNV T+N++IK LC+ RM Y LDEM ++ C P+ IT+ L L+KP E+
Sbjct: 289 GCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRG--CQPDSITYMCLFSRLEKPSEIL 346
Query: 417 WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGL 476
+ RM R+G + DTY ++++ + W V + W+ M++ G PD +Y +I L
Sbjct: 347 SLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDAL 406
Query: 477 YDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMN 511
KG L+ A Y EM +G+ P R ++ ++
Sbjct: 407 IQKGMLDMAREYEEEMIERGLSPRRRPELVEKSLD 441
>sp|Q3EAF8|PP294_ARATH Pentatricopeptide repeat-containing protein At3g62540,
mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2
SV=1
Length = 599
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 219/419 (52%), Gaps = 12/419 (2%)
Query: 89 EIAINVQNILKTCSV-----STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFF 143
E + N + + + C V + +E L++ +L L+ DLIV V+ R+R + A+ FF
Sbjct: 123 ESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFF 182
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAA 201
W + ++ S +N+++ +L + R+F ++ V +EM L+ +T+ I + +AAA
Sbjct: 183 CWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAA 242
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
++A+G+F+ K++ + LL L R K + A+ F+ K F ++ T
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYT 302
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++LNGWC + N+ EA R W D+I +PD V + + L + K A++LF M K
Sbjct: 303 VLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSK 362
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P+V + +I C + + A+E +M + G P+ Y LI K+++TV
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
YE L EM++K P+ T+N L+K + K PE + +M +N + S T+N+I+
Sbjct: 423 YELLKEMQEKGHP--PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 480
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
K Y + R W+EM KKG+ PD SYTV+I GL +G+ +A Y EM KGM
Sbjct: 481 KSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 6/229 (2%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ + A + A+ +F+ M + K V T NC++D+L K EA + ++
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN--GSCLPNEITFNYLLKSLKK 411
K R PN+ TY L+ C+++ + ++M + + + LL+S+KK
Sbjct: 291 KER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 349
Query: 412 PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
+ + + M+ G + +Y ++++ + + +++M G+ PD YT
Sbjct: 350 SDAIK-LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM-NIKLKERG 518
+I G + +L+ EM+ KG P+ +T L+ M N K+ E G
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 457
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 7/212 (3%)
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR 351
S TY + ++ L K + T + + + M KG + T + A K +A+ +
Sbjct: 195 SRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFE 253
Query: 352 EMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS--- 408
MK V T N L+ L + K + D+++++ PN +T+ LL
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER---FTPNMMTYTVLLNGWCR 310
Query: 409 LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRS 468
++ E + M +G K +NV+L+ + + + M+ KG P+ RS
Sbjct: 311 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 469 YTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
YT+MI + +E A+ YF +M G+ P+
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 4/160 (2%)
Query: 176 IQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
I+ FD+M D + Y L+ + ++ + +E G D + L+
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 233 LCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
+ K E + +NE I T N+I+ + V N + W ++IK PD
Sbjct: 448 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 507
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+Y + L +GK A R + M +KG K ++ N
Sbjct: 508 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 45/186 (24%)
Query: 364 TYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLE 420
TYNS++ L K ++ ET+ L+EM K L TF +K+ +E + E
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKG---LLTMETFTIAMKAFAAAKERKKAVGIFE 253
Query: 421 RMERNGCKMSTDTYNVILK------------------------------LYVNWDCEDKV 450
M++ K+ +T N +L + +N C +V
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWC--RV 311
Query: 451 RH------TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT- 503
R+ W +M G+ PD ++ VM+ GL + DA+ FH M+ KG P R+
Sbjct: 312 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 504 GILVND 509
I++ D
Sbjct: 372 TIMIRD 377
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 219/419 (52%), Gaps = 12/419 (2%)
Query: 89 EIAINVQNILKTCSV-----STKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFF 143
E + N + + + C V + +E L++ +L L+ DLIV V+ R+R + A+ FF
Sbjct: 122 ESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFF 181
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAA 201
W + ++ S +N+++ +L + R+F ++ V +EM L+ +T+ I + +AAA
Sbjct: 182 CWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAA 241
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
++A+G+F+ K++ + LL L R K + A+ F+ K F ++ T
Sbjct: 242 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYT 301
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++LNGWC + N+ EA R W D+I +PD V + + L + K A++LF M K
Sbjct: 302 VLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSK 361
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P+V + +I C + + A+E +M + G P+ Y LI K+++TV
Sbjct: 362 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 421
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
YE L EM++K P+ T+N L+K + K PE + +M +N + S T+N+I+
Sbjct: 422 YELLKEMQEKGHP--PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 479
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
K Y + R W+EM KKG+ PD SYTV+I GL +G+ +A Y EM KGM
Sbjct: 480 KSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 133/295 (45%), Gaps = 14/295 (4%)
Query: 233 LCRYKHV-EVAETFF--ESEKNEFGYDIKTMNIILNGWCVLGNV--YEAKRFWKDIIKSK 287
L R++H + A FF +E+ F +D +T N +++ +L +E + + +K
Sbjct: 167 LERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMS---ILAKTRQFETMVSVLEEMGTK 223
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
T+ + A + A+ +F+ M + K V T NC++D+L K EA
Sbjct: 224 GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 283
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN--GSCLPNEITFNYL 405
+ ++K R PN+ TY L+ C+++ + ++M + + + L
Sbjct: 284 VLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 342
Query: 406 LKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPD 465
L+S+KK + + + M+ G + +Y ++++ + + +++M G+ PD
Sbjct: 343 LRSMKKSDAIK-LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 401
Query: 466 QRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDM-NIKLKERG 518
YT +I G + +L+ EM+ KG P+ +T L+ M N K+ E G
Sbjct: 402 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 456
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 4/160 (2%)
Query: 176 IQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLW 232
I+ FD+M D + Y L+ + ++ + +E G D + L+
Sbjct: 387 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 446
Query: 233 LCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPD 291
+ K E + +NE I T N+I+ + V N + W ++IK PD
Sbjct: 447 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 506
Query: 292 SVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+Y + L +GK A R + M +KG K ++ N
Sbjct: 507 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 225/434 (51%), Gaps = 12/434 (2%)
Query: 88 DEIAINVQNILKTC--SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKW 145
DE A V+ I + S ++E ALN+ + L LI+ V++R Y FF W
Sbjct: 61 DEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLW 120
Query: 146 VSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAAA 201
+++ Y V +++ +L + R+F + + +EM P+L+ + + +L+ R+A+A
Sbjct: 121 ATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASA 180
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMN 261
+MV++A+ V D ++G D F LL LC+ V+ A FE + +F +++
Sbjct: 181 NMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFT 240
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+L GWC G + EAK + ++ EPD V + ++ GK+ A L M ++
Sbjct: 241 SLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKR 300
Query: 322 GRKPDVVTCNCIIDALC-FKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
G +P+V +I ALC +KR+ EA+ V EM+ GC ++ TY +LI CK ++
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVI 437
Y LD+M +K +P+++T+ ++ + +K EE ++E+M+R GC YNV+
Sbjct: 361 GYSVLDDMRKK--GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
++L + W EME G+ P ++ +MI+G +G L +A ++F EM +G+
Sbjct: 419 IRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Query: 498 VPEPRTGILVNDMN 511
P+ G L + +N
Sbjct: 479 FSAPQYGTLKSLLN 492
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 164/390 (42%), Gaps = 46/390 (11%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
+ P F ++L R + +E +V +M PD+V + LL+ YA A +
Sbjct: 232 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIV---VFTNLLSGYAHAGKMA 288
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRY--KHVEVAETFFESEKNEFGYDIKTMNII 263
+A + + ++ G +++ + L+ LCR + E F E E+ DI T +
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++G+C G + + D+ K P VTY + A KK + L L + M +G
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD++ N +I C + EA+ + EM+ G P V T+ +I +
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACN 468
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+ EM + P T LL +L + +++ +M+ D
Sbjct: 469 HFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKL------------EMAKDV---------- 506
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
W C + E + ++T+ IH LY KG +++A SY +M ++P+P T
Sbjct: 507 WSCISNKTSSCE--------LNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNT 558
Query: 504 -GILVNDMNIKLKER---GEQGKKVIKLTS 529
L+ +N KL R E +KV+K+ S
Sbjct: 559 YAKLMKGLN-KLYNRTIAAEITEKVVKMAS 587
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 199 bits (505), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 225/440 (51%), Gaps = 13/440 (2%)
Query: 88 DEIAINVQN---ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFK 144
DE A +V+ IL+ S ++E ALN+ + L LI V+NR Y FF
Sbjct: 77 DEFASDVEKSYRILRKFH-SRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFV 135
Query: 145 WVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM----PDLVNEKTYGILLNRYAA 200
W +++ Y V+ +++ +L + R+F + + +EM P L+ + + +L+ R+A+
Sbjct: 136 WAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFAS 195
Query: 201 AHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM 260
A MV++AI V D +FG D F LL LC++ V+ A FE + F +++
Sbjct: 196 ADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYF 255
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+L GWC +G + EAK + ++ EPD V Y ++ GK+ A L + M
Sbjct: 256 TSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRR 315
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+G +P+ +I ALC R+ EA++V EM+ C +V TY +L+ CK +++
Sbjct: 316 RGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDK 375
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMER-NGCKMSTD--TYNVI 437
Y LD+M +K +P+E+T+ +++ + +K E LE ME+ + D YNV+
Sbjct: 376 CYIVLDDMIKKG--LMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVV 433
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
++L + W EME+ G+ P ++ +MI+GL +G L +A +F EM +G+
Sbjct: 434 IRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Query: 498 VPEPRTGILVNDMNIKLKER 517
+ G L +N LK++
Sbjct: 494 FSVSQYGTLKLLLNTVLKDK 513
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 135/322 (41%), Gaps = 35/322 (10%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V+ Y LL+ YA A + +A + + G + + + L+ LC+ +E A
Sbjct: 285 PDIVD---YTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEA 341
Query: 243 -ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
+ F E E+ E D+ T +++G+C G + + D+IK P +TY + A
Sbjct: 342 MKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA 401
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
KK L L + M + PD+ N +I C + EA+ + EM+ G P
Sbjct: 402 HEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPG 461
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER 421
V T+ +I L + ++ EM + + T LL ++ K +++
Sbjct: 462 VDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKL------ 515
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
+M+ D ++ I CE V S+T+ IH L+ KG
Sbjct: 516 ------EMAKDVWSCITS---KGACELNV----------------LSWTIWIHALFSKGY 550
Query: 482 LEDALSYFHEMRLKGMVPEPRT 503
++A SY EM +P+P T
Sbjct: 551 EKEACSYCIEMIEMDFMPQPDT 572
>sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protein At2g13420,
mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2
SV=1
Length = 509
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 212/410 (51%), Gaps = 18/410 (4%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E +L ++LT +LI + R R + + A +FF+++ S FN I+D+LGR
Sbjct: 58 MESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGR 117
Query: 169 ARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD--LSAF 226
R+F + Q+ EM D + +T+ IL+ R AA + +A+ FD F E L F
Sbjct: 118 VRQFDVVRQLIVEM-DQTSPETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRRFRLVEF 176
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
LL LC+Y + ++A F K EFG D K I++ GWC L + A++F ++I+S
Sbjct: 177 GFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIES 236
Query: 287 KCEPDSVTYATFVNALTKKGKLG----------TALRLFQAMWEKGRKPDVVTCNCIIDA 336
EP+ VTY +N + + L A ++F M ++G +PDV + + ++
Sbjct: 237 GIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSIVLHM 296
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
+ L+ ++ MK +G P + TY S++K LC R+E E L+ M + S
Sbjct: 297 YSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGIS-- 354
Query: 397 PNEITFNYLLKSLKKPEEVPWV--LERMERNG-CKMSTDTYNVILKLYVNWDCEDKVRHT 453
P+ T+N K K ++ L R +NG CK ST TYNV+L ++N + V+
Sbjct: 355 PSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEI 414
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
W++++ GPD SYT ++HGL K + ++A YF EM +G +P+ T
Sbjct: 415 WDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLT 464
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 16/214 (7%)
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+VFDEM PD+ ++ I+L+ Y+ AH E + K G + + +++
Sbjct: 273 KVFDEMRQRGIEPDVT---SFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVV 329
Query: 231 LWLCR----YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
LC + E+ ET ES + T N + + A ++ +
Sbjct: 330 KCLCSCGRLEEAEELLETMVESGISP---SSATYNCFFKEYKGRKDANGAMNLYRKMKNG 386
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
C+P + TY + GK+ T ++ + PD+ + ++ LC K++ EA
Sbjct: 387 LCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEA 446
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
EM RG LP T+ +L K L + +M T
Sbjct: 447 CGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRT 480
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 225/424 (53%), Gaps = 16/424 (3%)
Query: 89 EIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSR 148
++A +NI K S + ++ AL+Q L ++ +++ +V+NR+R Y FF+W +
Sbjct: 67 DVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEK 126
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM--PDLVNEKTYGILLNRYAAAHMVEE 206
+ Y ++ +++ + R++ + + + M ++N +T+ I++ +YA A V+E
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDE 186
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNG 266
AI F+ +++ +L AF LL LC+ K+V A+ FE+ ++ F D KT +I+L G
Sbjct: 187 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEG 246
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
W N+ +A+ ++++I + C PD VTY+ V+ L K G++ AL + ++M KP
Sbjct: 247 WGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPT 306
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+ ++ + R+ EA++ EM+ G +V +NSLI CK RM+ VY L
Sbjct: 307 TFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLK 366
Query: 387 EMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
EM+ K + PN + N +L+ L + +E V +M + C+ DTY +++K++
Sbjct: 367 EMKSKGVT--PNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMF-- 421
Query: 444 WDCEDKVRHT----WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
CE K T W+ M KKG+ P +++V+I+GL ++ + A EM G+ P
Sbjct: 422 --CEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRP 479
Query: 500 EPRT 503
T
Sbjct: 480 SGVT 483
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 119/238 (50%), Gaps = 6/238 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM-PDLVNEKT--YGILLNRYAAAHMVEEAIGV 210
P ++ ++D+L +A R E + + M P + T Y +L++ Y + +EEA+
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 329
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVE-VAETFFESEKNEFGYDIKTMNIILNGWCV 269
F + G D++ F +L+ C+ ++ V E + + K+ NIIL
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 389
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G EA ++ +IK CEPD+ TY + +K ++ TA ++++ M +KG P + T
Sbjct: 390 RGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 448
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I+ LC ++ +A +L EM G P+ T+ L + L K +R E V ++L+E
Sbjct: 449 FSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER-EDVLKFLNE 505
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ + + K+ A+ F M + P++V N ++ ALC K + +A EV M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP- 412
++R P+ TY+ L++ K + E EM + C P+ +T++ ++ L K
Sbjct: 230 RDRFT-PDSKTYSILLEGWGKEPNLPKAREVFREM--IDAGCHPDIVTYSIMVDILCKAG 286
Query: 413 --EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYT 470
+E ++ M+ + CK +T Y+V++ Y + ++ T+ EME+ GM D +
Sbjct: 287 RVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFN 346
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKK 523
+I R+++ EM+ KG+ P ++ NI L+ E+G+K
Sbjct: 347 SLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSC------NIILRHLIERGEK 393
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 220/455 (48%), Gaps = 21/455 (4%)
Query: 66 TAQLVHSLANSDEKSEFQRY-------PGDEIAINVQNILKTCSVSTKGEIEKALNQCEL 118
+ LV +L + + F+ + P ++ + +L + K ++E L
Sbjct: 6 VSSLVRALYQTPKSQSFRIFSTLLHDPPSPDLVNEISRVLSD-HRNPKDDLEHTLVAYSP 64
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
++ +L+ V+ R + A+ FF W R D++ ++ ++++LG +++F L
Sbjct: 65 RVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDF 124
Query: 179 FDEMPDL----VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC 234
E + ++ K + I+ Y+ A++ EA F+R EFG + LL LC
Sbjct: 125 LIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLC 184
Query: 235 RYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
KHV A+ FF K FG KT +I++ GW + + A++ + ++++ C D
Sbjct: 185 DKKHVNHAQEFFGKAKG-FGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDL 243
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLRE 352
+ Y ++AL K G + ++FQ M G KPD + I A C + A +VL
Sbjct: 244 LAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDR 303
Query: 353 MKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP 412
MK +PNV T+N +IK LCK ++++ Y LDEM QK + P+ T+N ++
Sbjct: 304 MKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGAN--PDTWTYNSIMAYHCDH 361
Query: 413 EEV---PWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSY 469
EV +L RM+R C TYN++LKL + D+ WE M ++ P +Y
Sbjct: 362 CEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATY 421
Query: 470 TVMIHGLY-DKGRLEDALSYFHEMRLKGMVPEPRT 503
TVMIHGL KG+LE+A YF M +G+ P T
Sbjct: 422 TVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTT 456
>sp|P0C8R0|PP416_ARATH Putative pentatricopeptide repeat-containing protein At5g43820
OS=Arabidopsis thaliana GN=At5g43820 PE=3 SV=1
Length = 546
Score = 185 bits (469), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 191/403 (47%), Gaps = 14/403 (3%)
Query: 106 KGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDV 165
K I+K+L+ + L+ D++ +V+NR EA TFF W RE + ++ IL
Sbjct: 101 KSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRA 160
Query: 166 LGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGE 219
LGR + F ++ V M PDL + I ++ + H V AI +F+ + FG
Sbjct: 161 LGRRKLFSFMMDVLKGMVCEGVNPDL---ECLTIAMDSFVRVHYVRRAIELFEESESFGV 217
Query: 220 LDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
+F LL LC HV A++ F ++K +D + NI+++GW LG V E ++
Sbjct: 218 KCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKV 277
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
K++++S PD ++Y+ + L + G++ ++ +F + KG PD N +I
Sbjct: 278 LKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFIS 337
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ E++ R M + C PN+ TY+ L+ L K +++ E +EM + LP
Sbjct: 338 ARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRG--VLPTT 395
Query: 400 ITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
LK L P + ++ + GC++S Y ++LK + + + W+E
Sbjct: 396 GLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDE 455
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
M++ G D Y ++ GL G LE+A+ E KG P
Sbjct: 456 MQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCP 498
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 8/241 (3%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGILLNRYAAAHMVE 205
E + P ++ +++ LGR R + +++FD + ++ + Y ++ + +A +
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNII-- 263
E++ + R + +L + L+ L + + V A FE E G + T ++
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFE-EMLSRGV-LPTTGLVTS 400
Query: 264 -LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
L C G + A ++ K+ C Y + L++ GK G L ++ M E G
Sbjct: 401 FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESG 460
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
DV I+D LC + A+ V+ E +G PN Y+ L L + E Y
Sbjct: 461 YPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAY 520
Query: 383 E 383
+
Sbjct: 521 K 521
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
A+ E G DV + + I+ AL +K ++VL+ M G P++ + ++
Sbjct: 141 AVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVH 200
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV--LERMERNGCKMSTDTY 434
+ E +E E C +FN LL+ L + V + ++ + +Y
Sbjct: 201 YVRRAIELFEESESFGVKCSTE--SFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSY 258
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N+++ + +++ +EM + G GPD SY+ +I GL GR+ D++ F ++
Sbjct: 259 NIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKH 318
Query: 495 KGMVPE 500
KG VP+
Sbjct: 319 KGNVPD 324
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 99/222 (44%), Gaps = 15/222 (6%)
Query: 102 SVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNA 161
SV I+ N + + + +I N I+ FD E+ + + + E + P ++
Sbjct: 309 SVEIFDNIKHKGNVPDANVYNAMICNFISARDFD-ESMRYYRRMLDEECE--PNLETYSK 365
Query: 162 ILDVLGRARRFVELIQVFDEMPDLVNEKTYGIL------LNRYAAAHMVEEAIGVFDRRK 215
++ L + R+ + +++F+EM T G++ L Y H A+ ++ + +
Sbjct: 366 LVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPH---AAMVIYQKSR 422
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G SA++ LL L R+ + ++ E E GY D++ I++G C++G++
Sbjct: 423 KAGCRISESAYKLLLKRLSRFGKCGMLLNVWD-EMQESGYPSDVEVYEYIVDGLCIIGHL 481
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
A ++ ++ P+ Y+ + L K A +LF
Sbjct: 482 ENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 211/416 (50%), Gaps = 5/416 (1%)
Query: 87 GDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWV 146
++ + + + I K + T ++E LN+ + L+ LI V+ + A + FKW
Sbjct: 59 ANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWA 118
Query: 147 SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLVNEKTYGILLNRYAAAHMV 204
+ + ++ +NA+++ LG+ ++F + + D+M L++++T+ ++ RYA A V
Sbjct: 119 ENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKV 178
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNII 263
+EAIG F + +EFG + S F +L L + ++V A+ F+ +K F DIK+ I+
Sbjct: 179 KEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTIL 238
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
L GW N+ +++ EPD V Y +NA K K A+R F M ++
Sbjct: 239 LEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNC 298
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
KP +I+ L +K++ +ALE K+ G TYN+L+ C +RME Y+
Sbjct: 299 KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYK 358
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVN 443
+DEM K PN T++ +L L + + E + C+ + TY ++++++ N
Sbjct: 359 TVDEMRLKGVG--PNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCN 416
Query: 444 WDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ D W+EM+ KG+ P ++ +I L + +L++A YF+EM G+ P
Sbjct: 417 KERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 7/243 (2%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGI---LLNRYAAAHMVEEAI 208
+ P + I++ +A+++ E I+ F+EM + + I L+N + + +A+
Sbjct: 263 FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 322
Query: 209 GVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGW 267
F+R K G + + L+ C + +E A +T E G + +T +IIL+
Sbjct: 323 EFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHL 382
Query: 268 CVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDV 327
+ EA ++ + CEP TY V K +L A++++ M KG P +
Sbjct: 383 IRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGM 439
Query: 328 VTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDE 387
+ +I ALC + ++ EA E EM + G P ++ L + L R + V + + +
Sbjct: 440 HMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVK 499
Query: 388 MEQ 390
M++
Sbjct: 500 MDR 502
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 237/484 (48%), Gaps = 30/484 (6%)
Query: 69 LVHSLANSDEKSEFQRYP---GDEIAINVQNILKTCSV-----STKGEIEKALNQCELTL 120
++ SLAN E +F R G+ + V++I K C ++ ++ K L++C++ +
Sbjct: 71 VIPSLANWVESQKFSRQQVSEGNVVKKPVEDIDKVCDFLNKKDTSHEDVVKELSKCDVVV 130
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
T+ L++ V+ R+ W AY FF W + + Y + +NA++DVLG+ R F + ++ +
Sbjct: 131 TESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVN 190
Query: 181 EM-----PDLVNEKTYGILLNRYAAAHMVEEAIGVF-DRRKEFGELDDLSAFQNLLLWLC 234
EM LV T ++ R A + +A+ F + K +G D A +L+ L
Sbjct: 191 EMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALV 250
Query: 235 RYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK-SKCEPDSV 293
+ +E A F + D +T NI+++G+C ++ R D++K ++ PD V
Sbjct: 251 KENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCK-ARKFDDARAMMDLMKVTEFTPDVV 309
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
TY +FV A K+G + + M E G P+VVT ++ +L K++ EAL V +M
Sbjct: 310 TYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKM 369
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---K 410
K GC+P+ Y+SLI L K R + E ++M N + + +N ++ +
Sbjct: 370 KEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM--TNQGVRRDVLVYNTMISAALHHS 427
Query: 411 KPEEVPWVLERMER---NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
+ E +L+RME C + +TY +LK+ + + M K + D
Sbjct: 428 RDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVS 487
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT-GILVNDMNIKLKERGEQGKKVIK 526
+Y ++I GL G++E+A +F E KGMVP T +LV+++ E+ + +K
Sbjct: 488 TYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDEL-----EKKNMAEAKLK 542
Query: 527 LTSL 530
+ SL
Sbjct: 543 IQSL 546
>sp|Q9FX35|PP117_ARATH Pentatricopeptide repeat-containing protein At1g73400,
mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2
SV=2
Length = 568
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 223/457 (48%), Gaps = 26/457 (5%)
Query: 59 LFLGRIETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCEL 118
L + RIE SL +E R G A+ + + +++ ++EKAL++ +
Sbjct: 64 LEITRIEKVSEDQSLVYCNEND--IRTKGSNHAVGILHEAIMANLNAYDDMEKALDESSV 121
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLG----RARRFVE 174
LT ++ ++ R +++ + A+ FF W + YS +N ++D+L + ++F
Sbjct: 122 DLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRI 181
Query: 175 LIQVFDEMPDLVNEKTYGI------LLNRYAAAHMVEEAIGVFDRRKEF--GELDDLSAF 226
+I + D M N KT + +L +Y ++ + F +RK +++AF
Sbjct: 182 VIDMLDYMKR--NNKTVVLVDVLLEILRKYCERYLTH--VQKFAKRKRIRVKTQPEINAF 237
Query: 227 QNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
LL LC+ V+ E ++ D T N++ GWC + + +A + +++I++
Sbjct: 238 NMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEA 297
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK---PDVVTCNCIIDALCFKKRI 343
+P++ TY ++ + G + A LF M KG P T +I AL +
Sbjct: 298 GHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKA 357
Query: 344 PEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFN 403
E E++ M + GCLP+V+TY +I+ +C ++++ Y++LDEM K P+ +T+N
Sbjct: 358 EECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP--PDIVTYN 415
Query: 404 YLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK 460
L+ L +K +E + RM + C S TYN+++ ++ D D +TW EM+K+
Sbjct: 416 CFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKR 475
Query: 461 GMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
D +Y MI+GL+D R ++A E+ KG+
Sbjct: 476 DCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 512
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 120/291 (41%), Gaps = 39/291 (13%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIGV 210
P +N FN + R R + +++ +EM + ++ TY ++ + A MV+EA +
Sbjct: 266 PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADL 325
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVL 270
FD G + L + + AE FE ++
Sbjct: 326 FDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFE---------------------LI 364
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G +I + C PD TY + + K+ A + M KG PD+VT
Sbjct: 365 GR----------MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTY 414
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
NC + LC ++ EAL++ M C P+V TYN LI ++ + + EM++
Sbjct: 415 NCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDK 474
Query: 391 KNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
++ C+ + T+ ++ L + +E ++LE + G K+ ++ L
Sbjct: 475 RD--CVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 190/369 (51%), Gaps = 9/369 (2%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGS-NVFNAILDVLGRARRFVELIQVFDEMPDL---V 186
R+ + FF W + DY S + +N ++D+ G+ R+F + D M +
Sbjct: 125 RHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEI 184
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
+ +T+ IL+ RY A + EA+ F+R +++G + D AF ++ L R + A++FF
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF 244
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+S K+ F D+ ++ GWC G + EA++ +K++ + EP+ TY+ ++AL + G
Sbjct: 245 DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCG 304
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
++ A +F M + G P+ +T N ++ R + L+V +MK GC P+ TYN
Sbjct: 305 QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERME 423
LI+ C+ + +E + L+ M +K C N TFN + + ++K +V + +M
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKK--CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMM 422
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
C+ +T TYN++++++V D V +EM+ K + P+ +Y +++ G
Sbjct: 423 EAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWN 482
Query: 484 DALSYFHEM 492
+A F EM
Sbjct: 483 NAYKLFKEM 491
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 16/296 (5%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM- 182
++++ ++R R EA +FF S + + P V+ ++ RA E +VF EM
Sbjct: 226 IVISNLSRKRRASEAQ-SFFD--SLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282
Query: 183 -----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
P N TY I+++ + A VF + G + F NL+ +
Sbjct: 283 LAGIEP---NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG 339
Query: 238 HVE-VAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
E V + + + +K D T N ++ C N+ A + +IK KCE ++ T+
Sbjct: 340 RTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFN 399
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
T + KK + A R++ M E +P+ VT N ++ K L++ +EM ++
Sbjct: 400 TIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDK 459
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL-PNEITFNYLLKSLKK 411
PNV TY L+ C + Y+ EM ++ CL P+ + +L L++
Sbjct: 460 EVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEK--CLTPSLSLYEMVLAQLRR 513
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 414 EVPW-VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472
++ W +++ M+ ++S +T+ ++++ YV + H + ME G PD+ +++++
Sbjct: 168 DLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIV 227
Query: 473 IHGLYDKGRLEDALSYFHEMR 493
I L K R +A S+F ++
Sbjct: 228 ISNLSRKRRASEAQSFFDSLK 248
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 12/151 (7%)
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI---TFNYLLKSLKKP---EEVPWV 418
YN +I K+++ + + +D M+ +N EI TF L++ + E
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNV-----EISIETFTILIRRYVRAGLASEAVHC 208
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
RME GC +++++ + + ++ + K PD YT ++ G
Sbjct: 209 FNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCR 267
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRTGILVND 509
G + +A F EM+L G+ P T +V D
Sbjct: 268 AGEISEAEKVFKEMKLAGIEPNVYTYSIVID 298
Score = 35.8 bits (81), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/183 (16%), Positives = 76/183 (41%), Gaps = 39/183 (21%)
Query: 345 EALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNY 404
EA+ M++ GC+P+ ++ +I +L + +R + D ++ + P+ I +
Sbjct: 204 EAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE---PDVIVYTN 260
Query: 405 LLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
L++ + E+ + ++EM+ G+ P
Sbjct: 261 LVRGWCRAGEI--------------------------------SEAEKVFKEMKLAGIEP 288
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKV 524
+ +Y+++I L G++ A F +M G P I N++ +++ + + +KV
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAP---NAITFNNL-MRVHVKAGRTEKV 344
Query: 525 IKL 527
+++
Sbjct: 345 LQV 347
>sp|Q9SAH2|PP137_ARATH Pentatricopeptide repeat-containing protein At1g80880,
mitochondrial OS=Arabidopsis thaliana GN=At1g80880 PE=2
SV=1
Length = 540
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 218/439 (49%), Gaps = 14/439 (3%)
Query: 97 ILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGS 156
I + + ++ + +L L D ++I R +W A+ FKW + G
Sbjct: 98 IRQVSELESEADAMASLEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEKRG--CDDQ 155
Query: 157 NVFNAILDVLGRARRFVELIQVFDEMPDLVNE--KTYGILLNRYAAAHMVEEAIGVFDRR 214
+ ++ VLG ++F + +M ++ + K ++++RYAAA+ +AI FD
Sbjct: 156 KSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDIM 215
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWC-VLGNV 273
+F AFQ LL LCR+ H+E AE F + K F D++ N+ILNGWC + +V
Sbjct: 216 DKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDV 275
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EAKR W+++ P+ +Y+ ++ +K G L +LRL+ M ++G P + N +
Sbjct: 276 TEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSL 335
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
+ L + EA+++++++ G P+ TYNS+I+ LC+ +++ L M +N
Sbjct: 336 VYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENL 395
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVIL-KLYVNWDCEDKVRH 452
S P TF+ L+++ E+ VL +M+ + + +T+ +IL KL+ E+ ++
Sbjct: 396 S--PTVDTFHAFLEAVNF-EKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALK- 451
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNI 512
W EM++ + + Y I GL G LE A + EM+ KG V P L+ + +
Sbjct: 452 IWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPMLQKLLEEQKV 511
Query: 513 KLKERGEQGKKVIKLTSLG 531
K G + K + L +G
Sbjct: 512 K----GVRKSKRMNLQKVG 526
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 206/438 (47%), Gaps = 14/438 (3%)
Query: 72 SLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINR 131
SL S + + P D AI ++ + +T + + L+ T +L+ +V+ R
Sbjct: 8 SLCTSAAGANLKPPPADSAAI--AKLILSSPNTTHQDDQFLLSTKTTPWTPNLVNSVLKR 65
Query: 132 YRFDWEAAYTFFKWV-SREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VN 187
A FF ++ + +Y ++ F+ +D+ R + + M L +
Sbjct: 66 LWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPS 125
Query: 188 EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
KT+ I+ RYA+A ++A+ +F E G DL++F +L LC+ K VE A F
Sbjct: 126 PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 185
Query: 248 SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
+ + F D T N+ILNGWC++ +A K++++ P+ TY T + + G+
Sbjct: 186 ALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A F M ++ + DVVT ++ I A V EM G LP+V TYN+
Sbjct: 246 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNA 305
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMER 424
+I+ LCK +E +EM ++ PN T+N L++ L E +++RME
Sbjct: 306 MIQVLCKKDNVENAVVMFEEMVRRGYE--PNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
GC+ + TYN++++ Y +K +E+M P+ +Y ++I G++ + R ED
Sbjct: 364 EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Query: 485 ---ALSYFHEMRLKGMVP 499
A EM +G +P
Sbjct: 424 MVVAGKLLLEMVERGFIP 441
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 10/256 (3%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E +P +N +L RA + + F EM ++ TY +++ + A ++
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNII 263
A VFD G L ++ + ++ LC+ +VE A FE E GY+ + T N++
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFE-EMVRRGYEPNVTTYNVL 341
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G G + + + CEP+ TY + ++ ++ AL LF+ M
Sbjct: 342 IRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDC 401
Query: 324 KPDVVTCNCIIDALCFKKRIPE---ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
P++ T N +I + +KR + A ++L EM RG +P T+N ++ L
Sbjct: 402 LPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAF 461
Query: 381 VYEYLDEMEQKNGSCL 396
E L ++ K+GS L
Sbjct: 462 AKEIL-RLQSKSGSRL 476
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 174/357 (48%), Gaps = 12/357 (3%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++ +A + V D M PD+V TY +L + +++A+ V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVV---TYNTILRSLCDSGKLKQAMEV 226
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
DR + D+ + L+ CR V A + ++ D+ T N+++NG C
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA +F D+ S C+P+ +T+ + ++ G+ A +L M KG P VVT
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
N +I+ LC K + A+++L +M GC PN +YN L+ CK K+M+ EYL+ M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 390 QKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC 446
+ C P+ +T+N +L +L K E+ +L ++ GC TYN ++
Sbjct: 407 SR--GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K +EM K + PD +Y+ ++ GL +G++++A+ +FHE G+ P T
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 171/365 (46%), Gaps = 51/365 (13%)
Query: 166 LGRARRFVELIQVFD---EMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDD 222
LG+ R+ +++++ + +PD++ TY ++++ Y A + A+ V DR
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVI---TYNVMISGYCKAGEINNALSVLDRM-------- 198
Query: 223 LSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKD 282
D+ T N IL C G + +A
Sbjct: 199 -----------------------------SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+++ C PD +TY + A + +G A++L M ++G PDVVT N +++ +C + R
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
+ EA++ L +M + GC PNV T+N +++ +C R + L +M +K S P+ +TF
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS--PSVVTF 347
Query: 403 NYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEK 459
N L+ L + + +LE+M ++GC+ ++ +YN +L + D+ E M
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 460 KGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGE 519
+G PD +Y M+ L G++EDA+ +++ KG P I N + L + G+
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP---VLITYNTVIDGLAKAGK 464
Query: 520 QGKKV 524
GK +
Sbjct: 465 TGKAI 469
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 178/391 (45%), Gaps = 50/391 (12%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
SP +N IL L + + + ++V D M PD++ TY IL+ V
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI---TYTILIEATCRDSGVGH 257
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
A+ + D ++ G D+ + L+ +C+ ++ A F + + ++ T NIIL
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
C G +A++ D+++ P VT+ +N L +KG LG A+ + + M + G +P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ ++ N ++ C +K++ A+E L M +RGC P++ TYN+++ LCK ++E E L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKK--------------------PEEVPW-------- 417
+++ K C P IT+N ++ L K P+ + +
Sbjct: 438 NQLSSK--GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 418 ----------VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQR 467
ER G + + T+N I+ D+ M +G P++
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 468 SYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
SYT++I GL +G ++AL +E+ KG++
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 5/261 (1%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYG 192
W A + R+G +SP FN +++ L R I + ++MP N +Y
Sbjct: 325 WMDAEKLLADMLRKG-FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 193 ILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKN 251
LL+ + ++ AI +R G D+ + +L LC+ VE A E +
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ T N +++G G +A + ++ +PD++TY++ V L+++GK+ A
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
++ F G +P+ VT N I+ LC ++ A++ L M NRGC PN T+Y LI+
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 372 LCKIKRMETVYEYLDEMEQKN 392
L + E L+E+ K
Sbjct: 564 LAYEGMAKEALELLNELCNKG 584
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 17/246 (6%)
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G + E +F ++++ PD + T + + GK A ++ + + G PDV+T
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
N +I C I AL VL M P+V TYN++++ LC +++ E LD M Q
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 391 KNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKLYVNWDCE 447
++ C P+ IT+ L+++ + V +L+ M GC TYNV+ VN C+
Sbjct: 233 RD--CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL----VNGICK 286
Query: 448 ----DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D+ +M G P+ ++ +++ + GR DA +M KG P T
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 504 -GILVN 508
IL+N
Sbjct: 347 FNILIN 352
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
+ + G+L + + M G PD++ C +I C + +A ++L ++ G +P+
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWV 418
V TYN +I CK + LD M S P+ +T+N +L+SL K ++ V
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM-----SVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDK-VRHTW---EEMEKKGMGPDQRSYTVMIH 474
L+RM + C TY ++++ C D V H +EM +G PD +Y V+++
Sbjct: 227 LDRMLQRDCYPDVITYTILIE----ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVP 499
G+ +GRL++A+ + ++M G P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQP 307
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 170/325 (52%), Gaps = 9/325 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD V T G L+N + + V +A+ + D+ E G D+ A+ ++ LC+ K V A
Sbjct: 153 PDRV---TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 243 ETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
FF E E+ ++ T ++NG C +A R D+IK K P+ +TY+ ++A
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K GK+ A LF+ M PD+VT + +I+ LC RI EA ++ M ++GCL +
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLE- 420
V +YN+LI CK KR+E + EM Q+ + N +T+N L++ + +V E
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRG--LVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 421 --RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
+M+ G TYN++L + +K +E+M+K+ M D +YT +I G+
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 479 KGRLEDALSYFHEMRLKGMVPEPRT 503
G++E+A S F + LKG+ P+ T
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVT 472
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 5/251 (1%)
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D+ T NI++N +C V A ++K EPD VT + VN ++ ++ A+ L
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M E G KPD+V N IID+LC KR+ +A + +E++ +G PNV TY +L+ LC
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTD 432
R L +M +K + PN IT++ LL + K E + E M R
Sbjct: 239 SRWSDAARLLSDMIKKKIT--PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TY+ ++ D D+ ++ M KG D SY +I+G R+ED + F EM
Sbjct: 297 TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 493 RLKGMVPEPRT 503
+G+V T
Sbjct: 357 SQRGLVSNTVT 367
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 16/289 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P ++A+LD + + +E ++F+EM PD+V TY L+N ++E
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV---TYSSLINGLCLHDRIDE 313
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
A +FD G L D+ ++ L+ C+ K VE F E + + T N ++
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ G+V +A+ F+ + PD TY + L G+L AL +F+ M ++
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+VT +I +C ++ EA + + +G P++ TY +++ LC + V
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 386 DEMEQ----KNGSCLPN-EITFNY-LLKSLKKPEEVPWVLERMERNGCK 428
+M+Q KN L + +IT + L+K + P +L+ ++ CK
Sbjct: 494 TKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCK 542
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + D++KS+ P V + ++A+ K K + L + M G + D+ T N +I
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C ++ AL +L +M G P+ T SL+ C+ R+ +D+M +
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 395 CLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTW 454
P+ + +N ++ SL K + V D ++ +
Sbjct: 188 --PDIVAYNAIIDSLCKTKRV---------------NDAFDF-----------------F 213
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+E+E+KG+ P+ +YT +++GL + R DA +M K + P T
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 342 RIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEI- 400
++ +A+++ +M P++ +N L+ + K+K+ + V +ME + N++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG---IRNDLY 121
Query: 401 TFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDC-----EDKVRHTWE 455
TFN ++ +V L + + K+ + V + VN C D V +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKM-LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV-D 179
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+M + G PD +Y +I L R+ DA +F E+ KG+ P T
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 180/353 (50%), Gaps = 20/353 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFD 212
+N +++ L R RFV + V +M PD+V T L+N + + V +AI +
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV---TVSSLINGFCQGNRVFDAIDLVS 163
Query: 213 RRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILNGWCVLG 271
+ +E G D+ + ++ C+ V + E F E++ D T N ++ G C G
Sbjct: 164 KMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 272 NVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCN 331
+A R +D++ P+ +T+ ++ K+GK A++L++ M + PDV T N
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 332 CIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQK 391
+I+ LC R+ EA ++L M +GCLP+V TYN+LI CK KR++ + EM Q+
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 392 NGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVIL-KLYVNWDCE 447
+ + IT+N +++ +P+ + RM+ + + TY+++L L +NW E
Sbjct: 344 --GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVE 398
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
K +E M+K + D +Y ++IHG+ G +EDA F + KG+ P+
Sbjct: 399 -KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 450
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 8/347 (2%)
Query: 163 LDVLGRARRFVELIQVFDEMPDLVN--EKTYGILLNRYAAAHMVEEAIGVFDRRKEFGEL 220
+ + +A +F+ L + P +V + +G + ++ +EE I +F + + L
Sbjct: 7 ISIASKANKFLNLCLLQKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPL 66
Query: 221 DDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRF 279
+ F +L + + K+ ++ + F E G+D+ + NI++N C A
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 280 WKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCF 339
++K EPD VT ++ +N + ++ A+ L M E G +PDVV N IID C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 340 KKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ +A+E+ M+ G + TYNSL+ LC R + +M ++ +PN
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD--IVPNV 244
Query: 400 ITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEE 456
ITF ++ K E + E M R TYN ++ D+ + +
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 457 MEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
M KG PD +Y +I+G R+++ F EM +G+V + T
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 13/231 (5%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
D P F A++DV + +F E +++++EM PD+ TY L+N V
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF---TYNSLINGLCMHGRV 295
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNII 263
+EA + D G L D+ + L+ C+ K V E + F E + D T N I
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+ G+ G A+ + + P+ TY+ + L ++ AL LF+ M +
Sbjct: 356 IQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+ D+ T N +I +C + +A ++ R + +G P+V +Y ++I C+
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 181/360 (50%), Gaps = 17/360 (4%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMV 204
+Y P + FN ++ L + E + + D M PDL TYG ++N +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF---TYGTVVNGLCKRGDI 236
Query: 205 EEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNI 262
+ A+ + ++ E G+++ D+ + ++ LC YK+V A F E + ++ T N
Sbjct: 237 DLALSLL-KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ C G +A R D+I+ K P+ VT++ ++A K+GKL A +L+ M ++
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
PD+ T + +I+ C R+ EA + M ++ C PNV TYN+LIK CK KR+E
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILK 439
E EM Q+ + N +T+N L++ L + + + ++M +G TY+++L
Sbjct: 416 ELFREMSQR--GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +K +E ++K M PD +Y +MI G+ G++ED F + LKG+ P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 174/392 (44%), Gaps = 61/392 (15%)
Query: 160 NAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDR 213
N +LD+ + + + +F EM P +V + LL+ A + + I + +R
Sbjct: 54 NVLLDL-----KLDDAVDLFGEMVQSRPLPSIVE---FNKLLSAIAKMNKFDLVISLGER 105
Query: 214 RKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWC--- 268
+ DL ++ L+ CR + +A + + GY DI T++ +LNG+C
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVL-GKMMKLGYEPDIVTLSSLLNGYCHGK 164
Query: 269 --------------------------------VLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
+ EA ++ C+PD TY
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKN 355
T VN L K+G + AL L + M EKG+ + DVV IIDALC K + +AL + EM N
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 356 RGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV 415
+G PNV TYNSLI+ LC R L +M ++ + PN +TF+ L+ + K ++
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN--PNVVTFSALIDAFVKEGKL 341
Query: 416 PWVLERMERNGCKMSTD----TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTV 471
E++ K S D TY+ ++ + D D+ +H +E M K P+ +Y
Sbjct: 342 VEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 472 MIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+I G R+E+ + F EM +G+V T
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 143/313 (45%), Gaps = 15/313 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + VE +++DEM PD+ TY L+N + ++E
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF---TYSSLINGFCMHDRLDE 378
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F+ ++ + L+ C+ K VE E F E + + T N ++
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G+ A++ +K ++ PD +TY+ ++ L K GKL AL +F+ + + +P
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T N +I+ +C ++ + ++ + +G PNV Y ++I C+ E
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 386 DEMEQKNGSCLPNEITFNYLLKS-LKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNW 444
EM K LPN T+N L+++ L+ ++ E C D + + +N
Sbjct: 559 REM--KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI--SMVINM 614
Query: 445 DCEDKVRHTWEEM 457
+ ++ ++ EM
Sbjct: 615 LHDGRLEKSYLEM 627
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 42/244 (17%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEK 189
R D EA + F +S+ D P +N ++ +A+R E +++F EM + N
Sbjct: 375 RLD-EAKHMFELMISK--DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY L+ A + A +F + G D+ + LL LC+Y +E A FE
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVY---------------------------------- 274
+K++ DI T NI++ G C G V
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 275 -EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA ++++ + P+S TY T + A + G + L + M G D T + +
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Query: 334 IDAL 337
I+ L
Sbjct: 612 INML 615
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 179/366 (48%), Gaps = 17/366 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P S FN ++ L R R E + + D M PDLV TYGI++N
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLV---TYGIVVNGLCKRG 235
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLL-WLCRYKHVEVAETFF-ESEKNEFGYDIKTM 260
++ A+ + ++ E G+++ N ++ LC YK+V A F E + ++ T
Sbjct: 236 DIDLALSLL-KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
N ++ C G +A R D+I+ K P+ VT++ ++A K+GKL A +L+ M +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+ PD+ T + +I+ C R+ EA + M ++ C PNV TYN+LIK CK KR++
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLERMERNGCKMSTDTYNVI 437
E EM Q+ + N +T+ L+ + E V ++M +G TY+++
Sbjct: 415 GMELFREMSQR--GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
L N + +E +++ M PD +Y +MI G+ G++ED F + LKG+
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 498 VPEPRT 503
P T
Sbjct: 533 KPNVVT 538
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 169/354 (47%), Gaps = 13/354 (3%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
F+ +L + + +F +I + ++M +L N TY IL+N + + A+ V +
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G D+ +LL C + A + + E GY D T N +++G
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLV-GQMVEMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA ++ C+PD VTY VN L K+G + AL L + M + +P VV N I
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
IDALC K + +AL + EM N+G PNV TYNSLI+ LC R L +M ++
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD----TYNVILKLYVNWDCEDK 449
+ PN +TF+ L+ + K ++ E++ K S D TY+ ++ + D D+
Sbjct: 323 N--PNVVTFSALIDAFVKEGKLVEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+H +E M K P+ +Y +I G R+++ + F EM +G+V T
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 5/211 (2%)
Query: 164 DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
D L A+ EL+ D P++V TY L+ + A V+E + +F + G + +
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVV---TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ L+ + + + A+ F+ ++ DI T +I+L+G C G V A ++
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ +SK EPD TY + + K GK+ LF ++ KG KP+VVT ++ C K
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIK-HL 372
EA + REMK G LP+ TYN+LI+ HL
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 125/263 (47%), Gaps = 12/263 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + VE +++DEM PD+ TY L+N + ++E
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF---TYSSLINGFCMHDRLDE 379
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILN 265
A +F+ ++ + L+ C+ K V E E F E + + T +++
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ A+ +K ++ PD +TY+ ++ L GK+ TAL +F+ + +P
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T N +I+ +C ++ + ++ + +G PNV TY +++ C+ E
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 386 DEMEQKNGSCLPNEITFNYLLKS 408
EM+++ LP+ T+N L+++
Sbjct: 560 REMKEEGP--LPDSGTYNTLIRA 580
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 13/236 (5%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + D++KS+ P V ++ ++A+ K K + L + M G ++ T + +I
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C + ++ AL VL +M G P++ T NSL+ C R+ + +M +
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE---- 447
P+ TFN L+ L + E +++RM GC+ TY ++ VN C+
Sbjct: 184 --PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV----VNGLCKRGDI 237
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
D ++ME+ + P Y +I L + + DAL+ F EM KG+ P T
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 158 bits (400), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 180/362 (49%), Gaps = 17/362 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + E + + D+M PDLV TYG ++N
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV---TYGTVVNGLCKRG 237
Query: 203 MVEEAIGVFDRRKEFGELD-DLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTM 260
++ A+ + ++ E G+++ D+ + ++ LC+YKH++ A F E + D+ T
Sbjct: 238 DIDLALSLL-KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 261 NIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE 320
+ +++ C G +A R D+I+ K P+ VT++ ++A K+GKL A +L+ M +
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
+ PD+ T + +I+ C R+ EA + M ++ C PNV TY++LIK CK KR+E
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
E EM Q+ + N +T+ L+ + + V ++M G + TYN++
Sbjct: 417 GMELFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
L K +E +++ M PD +Y +MI G+ G++ED F + LKG+
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 498 VP 499
P
Sbjct: 535 SP 536
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 156/349 (44%), Gaps = 41/349 (11%)
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
LL+ A + E I + ++ + G DL + + CR + +A ++ +
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL-AKMMKL 147
Query: 254 GY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
GY DI T++ +LNG+C + +A +++ +PD+ T+ T ++ L K A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
+ L M ++G +PD+VT +++ LC + I AL +L++M+ +V YN++I
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 372 LCKIKRMETVYEYLDEMEQKN-----------GSCL----------------------PN 398
LCK K M+ EM+ K SCL PN
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 399 EITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD----TYNVILKLYVNWDCEDKVRHTW 454
+TF+ L+ + K ++ E++ K S D TY+ ++ + D D+ +H +
Sbjct: 328 VVTFSALIDAFVKEGKLVEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 455 EEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
E M K P+ +Y+ +I G R+E+ + F EM +G+V T
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 125/263 (47%), Gaps = 12/263 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + VE +++DEM PD+ TY L+N + ++E
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF---TYSSLINGFCMHDRLDE 381
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F+ ++ + L+ C+ K VE E F E + + T +++
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ + A+ +K ++ P+ +TY ++ L K GKL A+ +F+ + +P
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T N +I+ +C ++ + E+ + +G PNV YN++I C+ E L
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 386 DEMEQKNGSCLPNEITFNYLLKS 408
+M++ LPN T+N L+++
Sbjct: 562 KKMKEDGP--LPNSGTYNTLIRA 582
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 4/226 (1%)
Query: 164 DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
D L A+ EL+ D P++V TY L+ + A VEE + +F + G + +
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVV---TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ L+ + + + A+ F+ + + +I T NI+L+G C G + +A ++
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ +S EPD TY + + K GK+ LF + KG P+V+ N +I C K
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
EA +L++MK G LPN TYN+LI+ + E E + EM
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 92/244 (37%), Gaps = 42/244 (17%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEK 189
R D EA + F +S+ D P ++ ++ +A+R E +++F EM + N
Sbjct: 378 RLD-EAKHMFELMISK--DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY L++ + A + A VF + G ++ + LL LC+ + A FE
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVY---------------------------------- 274
+++ DI T NI++ G C G V
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 275 -EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA K + + P+S TY T + A + G + L + M G D T +
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Query: 334 IDAL 337
+ L
Sbjct: 615 TNML 618
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 180/360 (50%), Gaps = 17/360 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
Y P + FN ++ L + E + + D M PDLV TYG+++N +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV---TYGVVVNGLCKRGDTD 238
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLL-WLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
A + ++ ++ G+L+ N ++ LC+YKH++ A F E E ++ T + +
Sbjct: 239 LAFNLLNKMEQ-GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ C G +A R D+I+ K PD T++ ++A K+GKL A +L+ M ++
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P +VT + +I+ C R+ EA ++ M ++ C P+V TYN+LIK CK KR+E E
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VLERMERNGCKMSTDTYNVILKL 440
EM Q+ + N +T+N L++ L + + + + M +G + TYN +L
Sbjct: 418 VFREMSQR--GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+K +E +++ M P +Y +MI G+ G++ED F + LKG+ P+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 181/411 (44%), Gaps = 23/411 (5%)
Query: 131 RYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKT 190
R F + +Y + + +SR G + A+ + ++R F +I+
Sbjct: 37 RRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIE------------- 83
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
+ LL+ A + + I + ++ + G + + L+ CR + +A +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL-GKM 142
Query: 251 NEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ GY+ I T++ +LNG+C + EA + + +P++VT+ T ++ L K
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
A+ L M KG +PD+VT +++ LC + A +L +M+ P V YN++
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN 425
I LCK K M+ EME K PN +T++ L+ L + + +L M
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETK--GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
T++ ++ +V + ++EM K+ + P +Y+ +I+G RL++A
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 486 LSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK-LTSLGLKGN 535
F M K P+ T + K K R E+G +V + ++ GL GN
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREMSQRGLVGN 430
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 125/263 (47%), Gaps = 12/263 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P F+A++D + + VE +++DEM P +V TY L+N + ++E
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV---TYSSLINGFCMHDRLDE 379
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F+ D+ + L+ C+YK VE E F E + + T NI++
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G+ A+ +K+++ P+ +TY T ++ L K GKL A+ +F+ + +P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ T N +I+ +C ++ + ++ + +G P+V YN++I C+ E
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 386 DEMEQKNGSCLPNEITFNYLLKS 408
EM K LPN +N L+++
Sbjct: 560 KEM--KEDGTLPNSGCYNTLIRA 580
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 83/223 (37%), Gaps = 39/223 (17%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P +N ++ + +R E ++VF EM + N TY IL+ A + A +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE----------------------- 247
F G ++ + LL LC+ +E A FE
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 248 SEKNEFGYD-------------IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVT 294
+ K E G+D + N +++G+C G+ EA +K++ + P+S
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 295 YATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
Y T + A + G + L + M G D T + + L
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 195/430 (45%), Gaps = 47/430 (10%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + E + + D+M PDLV TYG ++N
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV---TYGTVVNGLCKRG 237
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMN 261
++ A+ + ++ + ++ F ++ LC+Y+HVEVA + F E E ++ T N
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++N C G +A R ++++ K P+ VT+ ++A K+GKL A +L + M ++
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
PD +T N +I+ C R+ EA ++ + M ++ CLPN+ TYN+LI CK KR+E
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
E EM Q+ + N +T+ +++ + + V ++M N TY+++L
Sbjct: 418 VELFREMSQR--GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 439 KLYVNWDCED--------------------------------KVRHTWEEMEKKGMGPDQ 466
++ D KV W+ + PD
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDV 535
Query: 467 RSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIK 526
+Y MI GL K L++A F +M+ G +P T + N++ +R + + +
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKE 595
Query: 527 LTSLGLKGNA 536
+ S G G+A
Sbjct: 596 MRSSGFVGDA 605
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 154/350 (44%), Gaps = 43/350 (12%)
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEF 253
LL+ A + E I + ++ + G DL + + CR + +A ++ +
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL-AKMMKL 147
Query: 254 GY--DIKTMNIILNGWC-----------------------------------VLGNVYEA 276
GY DI T++ +LNG+C + EA
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 277 KRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDA 336
+++ C+PD VTY T VN L K+G + AL L M K +VV N IID+
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 337 LCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL 396
LC + + A+++ EM+ +G PNV TYNSLI LC R L M +K +
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN-- 325
Query: 397 PNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHT 453
PN +TFN L+ + K E + E M + T TYN+++ + + D+ +
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 454 WEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
++ M K P+ ++Y +I+G R+ED + F EM +G+V T
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 38/255 (14%)
Query: 119 TLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQV 178
T+T +L++N + EA F VS+ D P +N +++ + +R + +++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSK--DCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 179 FDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
F EM + N TY ++ + A + A VF + D+ + LL LC
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 236 YKHVEVAETFF------ESEKNEFGY---------------------------DIKTMNI 262
Y ++ A F E E N F Y D+ T N
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNT 540
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+++G C + EA ++ + + P+S TY T + A + + L + M G
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Query: 323 RKPDVVTCNCIIDAL 337
D T + + + L
Sbjct: 601 FVGDASTISLVTNML 615
>sp|Q9FZ19|PPR5_ARATH Putative pentatricopeptide repeat-containing protein At1g02420
OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2
Length = 491
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 211/446 (47%), Gaps = 22/446 (4%)
Query: 66 TAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVST-KGEIEKALNQCELTLTDDL 124
+ +HS+A SD K P +E + + + + + S + E++++L+ + L+ DL
Sbjct: 19 SVSFLHSVALSDAK-----VPVEEEGDDAETVFRMINGSNLQVELKESLSSSGIHLSKDL 73
Query: 125 IVNVINRYRFDWE---AAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDE 181
I V+ R RF F+++ S + S + +L +LGR R+F ++ ++ E
Sbjct: 74 IDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIE 133
Query: 182 MP----DLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEF-GELDDLSAFQNLLLWLCRY 236
L++ +T ++L R A V + + F + K + D + F LL LC+
Sbjct: 134 TKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQE 193
Query: 237 KHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
K + A + S K++F D++T NI+L+GW K +PD VTY
Sbjct: 194 KSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMKG---KGLKPDVVTYN 250
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
+ ++ K ++ A +L M E+ PDV+T +I L + +A EVL+EMK
Sbjct: 251 SLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEY 310
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV- 415
GC P+V YN+ I++ C +R+ + +DEM +K S PN T+N + L ++
Sbjct: 311 GCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLS--PNATTYNLFFRVLSLANDLG 368
Query: 416 -PWVLE-RMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMI 473
W L RM N C +T + ++K++ + D WE+M KG G V++
Sbjct: 369 RSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLL 428
Query: 474 HGLYDKGRLEDALSYFHEMRLKGMVP 499
L D ++E+A EM KG P
Sbjct: 429 DLLCDLAKVEEAEKCLLEMVEKGHRP 454
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 102/250 (40%), Gaps = 45/250 (18%)
Query: 258 KTMNIILNGWCVLGNVYE-AKRFWKDIIKSKCEPDSVTYATF---VNALTKKGKLGTALR 313
+TM ++L L +V + + FWK + PD A F + L ++ + A
Sbjct: 145 RTMQVVLGRVAKLCSVRQTVESFWK---FKRLVPDFFDTACFNALLRTLCQEKSMTDARN 201
Query: 314 LFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLC 373
++ ++ + +PD+ T N ++ K EA EMK +G P+V TYNSLI C
Sbjct: 202 VYHSLKHQF-QPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYC 257
Query: 374 KIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDT 433
K + +E Y+ +D+M ++ EE P V+ T
Sbjct: 258 KDREIEKAYKLIDKMREE---------------------EETPDVI-------------T 283
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y ++ DK R +EM++ G PD +Y I RL DA EM
Sbjct: 284 YTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMV 343
Query: 494 LKGMVPEPRT 503
KG+ P T
Sbjct: 344 KKGLSPNATT 353
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P +N+++DV + R + ++ D+M PD++ TY ++ ++A
Sbjct: 244 PDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVI---TYTTVIGGLGLIGQPDKA 300
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNG 266
V KE+G D++A+ + C + + A+ E K + T N+
Sbjct: 301 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 360
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+ ++ + + ++ ++C P++ + + + K+ A+RL++ M KG
Sbjct: 361 LSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSY 420
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
+ + ++D LC ++ EA + L EM +G P+ ++ +
Sbjct: 421 SLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 178/362 (49%), Gaps = 15/362 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + + E + + + M PDLV TYG ++N
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV---TYGAVINGLCKRG 219
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
+ A+ + ++ ++ D+ + ++ LC+Y+HV+ A F E + D+ T +
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ C G +A R D+++ K P+ VT+ + ++A K+GKL A +LF M ++
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
P++VT N +I+ C R+ EA ++ M ++ CLP+V TYN+LI CK K++
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEE---VPWVLERMERNGCKMSTDTYNVIL 438
E +M ++ + N +T+ L+ + + V ++M +G + TYN +L
Sbjct: 400 MELFRDMSRR--GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+K +E ++K M PD +Y +M G+ G++ED F + LKG+
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 499 PE 500
P+
Sbjct: 518 PD 519
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 161/376 (42%), Gaps = 52/376 (13%)
Query: 174 ELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
E + +F EM P +V + LL+ A + I ++ + G +L +
Sbjct: 48 EAVDLFGEMVKSRPFPSIVE---FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 228 NLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK- 285
++ LCR + A + K +G I T+N +LNG+C + EA +++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 286 ----------------------------------SKCEPDSVTYATFVNALTKKGKLGTA 311
C+PD VTY +N L K+G+ A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 312 LRLFQAMWEKGR-KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK 370
L L M EKG+ + DVV + +ID+LC + + +AL + EM N+G P+V TY+SLI
Sbjct: 225 LNLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 371 HLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGC 427
LC R L +M ++ + PN +TFN L+ + K E + + M +
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKIN--PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 428 KMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALS 487
+ TYN ++ + D D+ + + M K PD +Y +I+G ++ D +
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 488 YFHEMRLKGMVPEPRT 503
F +M +G+V T
Sbjct: 402 LFRDMSRRGLVGNTVT 417
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 140/295 (47%), Gaps = 15/295 (5%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P FN+++D + + +E ++FDEM P++V TY L+N + ++E
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV---TYNSLINGFCMHDRLDE 363
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILN 265
A +F L D+ + L+ C+ K V + E F + + + T +++
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ + A+ +K ++ P+ +TY T ++ L K GKL A+ +F+ + + +P
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ T N + + +C ++ + ++ + +G P+V YN++I CK E Y
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Query: 386 DEMEQKNGSCLPNEITFNYLLKS-LKKPEEVPWVLERMERNGCKMSTD--TYNVI 437
+M++ LP+ T+N L+++ L+ ++ E C+ + D TY ++
Sbjct: 544 IKMKEDGP--LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 116/244 (47%), Gaps = 13/244 (5%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVF------DEMPDLVNEKT 190
EA F + + R D P +N++++ R E Q+F D +PD+V T
Sbjct: 328 EAEKLFDEMIQRSID--PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV---T 382
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEK 250
Y L+N + A V + + +F G + + + L+ + + A+ F+
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 251 NEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
++ + +I T N +L+G C G + +A ++ + KSK EPD TY + K GK+
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
LF ++ KG KPDV+ N +I C K EA + +MK G LP+ TYN+LI
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 370 K-HL 372
+ HL
Sbjct: 563 RAHL 566
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 92/233 (39%), Gaps = 36/233 (15%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
KL A+ LF M + P +V + ++ A+ K+ + +M+ G N+ TYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQ-------------KNGSC------------------ 395
+I LC+ ++ L +M + NG C
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 396 --LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
P+ +TF L+ L K E ++ERM GC+ TY ++ D
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +MEK + D Y+ +I L ++DAL+ F EM KG+ P+ T
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 100/257 (38%), Gaps = 42/257 (16%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP--DLV-NEK 189
R D EA F VS+ D P +N +++ +A++ V+ +++F +M LV N
Sbjct: 360 RLD-EAQQIFTLMVSK--DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES- 248
TY L++ + A + A VF + G ++ + LL LC+ +E A FE
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRF---------------WKDIIKSKCE---- 289
+K++ DI T NI+ G C G V + + +I C+
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 290 ----------------PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
PDS TY T + A + G + L + M D T +
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Query: 334 IDALCFKKRIPEALEVL 350
D L + LEVL
Sbjct: 597 TDMLHDGRLDKGFLEVL 613
>sp|Q9M8W9|PP211_ARATH Pentatricopeptide repeat-containing protein At3g04130,
mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2
SV=2
Length = 508
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 195/457 (42%), Gaps = 79/457 (17%)
Query: 118 LTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ 177
+ L+D L+ +++R+R DW +A KW + S+ ++ +D+LG+A+++ + +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 178 VFDEM--PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR 235
+ M LV T ++ R+A A EEA+G+FDR EFG + + LL LC+
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 236 YKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFW--------------- 280
K VE A K+ + T NI ++GWC V EA W
Sbjct: 203 EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA--LWTIQEMKGHGFRPCVI 260
Query: 281 --KDIIKSKCE--------------------PDSVTYATFVNALTKKGKLGTALRLFQAM 318
II+ C+ P+S+TY T +++L + + ALR+ M
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLR-EMKNRGCLPNVTTYNSLIKHLCKIKR 377
G KPD + NC+I L R+ EA V R EM G N +TYNS+I C
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVI 437
+ E L EME N C P+ T+ LL+S K +V V +
Sbjct: 381 EDKAIELLKEMESSN-LCNPDVHTYQPLLRSCFKRGDVVEV----------------GKL 423
Query: 438 LKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
LK E + K + D+ +YT +I L E A F EM + +
Sbjct: 424 LK---------------EMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDI 468
Query: 498 VPEPRTGIL----VNDMNI-KLKERGEQGKKVIKLTS 529
P RT +L V N+ + ER E K +KLT+
Sbjct: 469 TPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLTA 505
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 165/337 (48%), Gaps = 11/337 (3%)
Query: 168 RARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQ 227
RA F+ + PDLV T+ LLN Y + +E+AI +FD+ G ++ +
Sbjct: 136 RASCFLGKMMKLGFEPDLV---TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT 192
Query: 228 NLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKS 286
L+ LC+ +H+ A E F + N ++ T N ++ G C +G +A +D++K
Sbjct: 193 TLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR 252
Query: 287 KCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEA 346
+ EP+ +T+ ++A K GKL A L+ M + PDV T +I+ LC + EA
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLL 406
++ M+ GC PN Y +LI CK KR+E + EM QK + N IT+ L+
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK--GVVANTITYTVLI 370
Query: 407 KS---LKKPEEVPWVLERMERNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGM 462
+ + +P+ V +M TYNV+L L N E K +E M K+ M
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE-KALMIFEYMRKREM 429
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ +YT++I G+ G++EDA F + KGM P
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 139/303 (45%), Gaps = 8/303 (2%)
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYD--IKTMNII 263
+A+ +F R L + F LL + + +V + FE + G + T NI+
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFE-QMQILGIPPLLCTCNIV 124
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ C+ A F ++K EPD VT+ + +N ++ A+ LF + G
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
KP+VVT +I LC + + A+E+ +M G PNV TYN+L+ LC+I R
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
L +M ++ PN ITF L+ + + K E + M + TY ++
Sbjct: 245 LLRDMMKRRIE--PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ D+ R + ME+ G P++ YT +IHG R+ED + F+EM KG+V
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 501 PRT 503
T
Sbjct: 363 TIT 365
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 163/372 (43%), Gaps = 19/372 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILL 195
W A++ ++ + R G ++ FN LD+ R L + D + LL
Sbjct: 44 WIRAFSSYRKILRNGLHNLQ---FNDALDLFTRMVHSRPLPSIID----------FTRLL 90
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFG 254
+ A + + I +F++ + G L ++ +C A F + K F
Sbjct: 91 SVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFE 150
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ T +LNG+C + +A + I+ +P+ VTY T + L K L A+ L
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M G +P+VVT N ++ LC R +A +LR+M R PNV T+ +LI K
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMST 431
+ ++ E + M Q S P+ T+ L+ L +E + MERNGC +
Sbjct: 271 VGKLMEAKELYNVMIQM--SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
Y ++ + + + EM +KG+ + +YTV+I G GR + A F++
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 492 MRLKGMVPEPRT 503
M + P+ RT
Sbjct: 389 MSSRRAPPDIRT 400
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 1/180 (0%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETF 245
NE Y L++ + + VE+ + +F + G + + + L+ C +VA E F
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
+ DI+T N++L+G C G V +A ++ + K + + + VTY + + K
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
GK+ A LF +++ KG KP+V+T +I C + I EA + ++MK G LPN + Y
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 12/256 (4%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P F A++D + + +E ++++ M PD+ TYG L+N +++EA
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF---TYGSLINGLCMYGLLDEA 312
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNG 266
+F + G + + L+ C+ K VE + F+E + + T +++ G
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 267 WCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPD 326
+C++G A+ + + + PD TY ++ L GK+ AL +F+ M ++ +
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Query: 327 VVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLD 386
+VT II +C ++ +A ++ + ++G PNV TY ++I C+ +
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Query: 387 EMEQKNGSCLPNEITF 402
+M K LPNE +
Sbjct: 493 KM--KEDGFLPNESVY 506
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 169/355 (47%), Gaps = 15/355 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
FN +L + + ++F +I + ++M L N TY IL+N + + A+ + +
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G + +LL C K + A + + E GY D T +++G +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVD-QMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA +++ C+P+ VTY VN L K+G + A L M + DVV N I
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
ID+LC + + +AL + +EM+ +G PNV TY+SLI LC R + L +M +K
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWV-LERMERNGCKMSTD----TYNVILKLYVNWDCED 448
+ PN +TFN L+ + K E +V E++ + K S D TYN ++ + D D
Sbjct: 252 N--PNLVTFNALIDAFVK--EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K + +E M K PD +Y +I G R+ED F EM +G+V + T
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 174/365 (47%), Gaps = 15/365 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + E + + D M P+LV TYG+++N
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV---TYGVVVNGLCKRG 164
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
++ A + ++ + D+ F ++ LC+Y+HV+ A F E E ++ T +
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ C G +A + D+I+ K P+ VT+ ++A K+GK A +L M ++
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
PD+ T N +I+ C R+ +A ++ M ++ C P++ TYN+LIK CK KR+E
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
E EM + + + +T+ L++ L + V ++M +G TY+++L
Sbjct: 345 TELFREMSHR--GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
N +K ++ M+K + D YT MI G+ G+++D F + LKG+
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Query: 499 PEPRT 503
P T
Sbjct: 463 PNVVT 467
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 126/267 (47%), Gaps = 12/267 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E +P FNA++D + +FVE ++ D+M PD+ TY L+N +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF---TYNSLINGFCMHD 304
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMN 261
+++A +F+ DL + L+ C+ K VE E F E D T
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++ G G+ A++ +K ++ PD +TY+ ++ L GKL AL +F M +
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
K D+ +I+ +C ++ + ++ + +G PNV TYN++I LC + ++
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKS 408
Y L +M++ LP+ T+N L+++
Sbjct: 485 YALLKKMKEDGP--LPDSGTYNTLIRA 509
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 13/228 (5%)
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
++KS+ P + ++A+ K K + L + M G ++ T N +I+ C + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITF 402
I AL +L +M G P++ T +SL+ C KR+ +D+M + P+ ITF
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR--PDTITF 118
Query: 403 NYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE----DKVRHTWE 455
L+ L K E +++RM + GC+ + TY V+ VN C+ D +
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV----VNGLCKRGDIDLAFNLLN 174
Query: 456 EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ME + D + +I L ++DAL+ F EM KG+ P T
Sbjct: 175 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 222
Score = 39.7 bits (91), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+VF +M PD++ TY ILL+ +E+A+ VFD ++ D+ + ++
Sbjct: 381 KVFKQMVSDGVPPDIM---TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 231 LWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
+C+ V+ F S ++ T N +++G C + EA K + +
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAM 318
PDS TY T + A + G + L + M
Sbjct: 498 PDSGTYNTLIRAHLRDGDKAASAELIREM 526
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 209/449 (46%), Gaps = 49/449 (10%)
Query: 123 DLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQ-VFDE 181
DL+V +R + A + G + PG +NA+LD R++R + + VF E
Sbjct: 138 DLVVKSYSRLSL-IDKALSIVHLAQAHG-FMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 182 MPDL---VNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKH 238
M + N TY IL+ + A ++ A+ +FD+ + G L ++ + L+ C+ +
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 239 VEVA----------------------------------ETFFESEKNEFGYDIK--TMNI 262
++ +F +E N GY + T N
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++ G+C GN ++A ++++ P +TY + ++++ K G + A+ M +G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
P+ T ++D K + EA VLREM + G P+V TYN+LI C +ME
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILK 439
L++M++K S P+ ++++ +L + +V L M G K T TY+ +++
Sbjct: 436 AVLEDMKEKGLS--PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
+ + +EEM + G+ PD+ +YT +I+ +G LE AL +EM KG++P
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 500 EPRT-GILVNDMNIKLKERGEQGKKVIKL 527
+ T +L+N +N + + R E + ++KL
Sbjct: 554 DVVTYSVLINGLNKQSRTR-EAKRLLLKL 581
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 164/354 (46%), Gaps = 44/354 (12%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK-HVEVAETFF-ES 248
+ +++ Y+ ++++A+ + + G + + ++ +L R K ++ AE F E
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+++ ++ T NI++ G+C GN+ A + + C P+ VTY T ++ K K+
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
+L ++M KG +P++++ N +I+ LC + R+ E VL EM RG + TYN+L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 369 IK-----------------------------------HLCKIKRMETVYEYLDEMEQKNG 393
IK +CK M E+LD+M + G
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR-G 375
Query: 394 SCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILKLY-VNWDCEDK 449
C PNE T+ L+ + E VL M NG S TYN ++ + V ED
Sbjct: 376 LC-PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ E+M++KG+ PD SY+ ++ G +++AL EM KG+ P+ T
Sbjct: 435 IA-VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 147/335 (43%), Gaps = 21/335 (6%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFES 248
TY L++ A + A+ D+ + G + + L+ + ++ E E
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
N F + T N ++NG CV G + +A +D+ + PD V+Y+T ++ + +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
ALR+ + M EKG KPD +T + +I C ++R EA ++ EM G P+ TY +L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERN 425
I C +E + +EM +K LP+ +T++ L+ L K E +L ++
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEK--GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVR---------------HTWEEMEKKGMGPDQRSYT 470
S TY+ +++ N + + V +E M K PD +Y
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYN 644
Query: 471 VMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGI 505
+MIHG G + A + + EM G + T I
Sbjct: 645 IMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 145/339 (42%), Gaps = 31/339 (9%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + ++D + E +V EM P +V TY L+N + +E+A
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV---TYNALINGHCVTGKMEDA 434
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
I V + KE G D+ ++ +L CR V+ A + E E G D T + ++
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV-KREMVEKGIKPDTITYSSLIQ 493
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+C EA ++++++ PD TY +NA +G L AL+L M EKG P
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
DVVT + +I+ L + R EA +L ++ +P+ TY++LI++ I E+
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI-------EFK 606
Query: 386 DEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWD 445
+ G C+ +T E V E M K YN+++ +
Sbjct: 607 SVVSLIKGFCMKGMMT------------EADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654
Query: 446 CEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
K ++EM K G + ++ L+ +G++ +
Sbjct: 655 DIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 116/270 (42%), Gaps = 27/270 (10%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + +++++ RR E +++EM PD E TY L+N Y +E+A
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD---EFTYTALINAYCMEGDLEKA 539
Query: 208 IGVFDRRKEFGELDDLSAF----------------QNLLLWLCRYKHVEVAETFFESEKN 251
+ + + E G L D+ + + LLL L + V T+ +N
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 252 EFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTA 311
+ K++ ++ G+C+ G + EA + ++ ++ +PD Y ++ + G + A
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKH 371
L++ M + G VT ++ AL + ++ E V+ + L L++
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEI 719
Query: 372 LCKIKRMETVYEYLDEMEQKNGSCLPNEIT 401
+ M+ V + L EM K+G LPN I+
Sbjct: 720 NHREGNMDVVLDVLAEM-AKDG-FLPNGIS 747
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 95/223 (42%), Gaps = 30/223 (13%)
Query: 319 WEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRM 378
W + + C CI + K ++ + ++L E L + Y SL+ K +
Sbjct: 71 WANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDD--EYASLV-----FKSL 123
Query: 379 ETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYN 435
+ Y+ C F+ ++KS L ++ ++ + +G +YN
Sbjct: 124 QETYDL----------CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYN 173
Query: 436 VILKLYV----NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
+L + N + V ++EM + + P+ +Y ++I G G ++ AL+ F +
Sbjct: 174 AVLDATIRSKRNISFAENV---FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 492 MRLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTSLGLKG 534
M KG +P T + D KL+ + + G K+++ S+ LKG
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLR-KIDDGFKLLR--SMALKG 270
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 160/323 (49%), Gaps = 14/323 (4%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PD+V T+ L+N + + +EEA+ + ++ E G D+ + ++ LC+ HV A
Sbjct: 140 PDIV---TFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 243 ETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVN 300
+ F+ +N +G D+ ++NG C G +A + + K K +PD +T+ ++
Sbjct: 197 LSLFDQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 301 ALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLP 360
A K+GK A L+ M P++ T +I+ C + + EA ++ M+ +GC P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 361 NVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPW 417
+V Y SLI CK K+++ + EM QK + N IT+ L++ + KP
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT--GNTITYTTLIQGFGQVGKPNVAQE 373
Query: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKK---GMGPDQRSYTVMIH 474
V M G + TYNV+L K +E+M+K+ G+ P+ +Y V++H
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 475 GLYDKGRLEDALSYFHEMRLKGM 497
GL G+LE AL F +MR + M
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREM 456
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 137/296 (46%), Gaps = 6/296 (2%)
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIIL 264
EA+ +F E L + F LL + + K +V + + +D+ T N+++
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
N +C Y A F ++K EPD VT+ + +N ++ A+ + M E G K
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PDVV IID+LC + AL + +M+N G P+V Y SL+ LC R
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKLY 441
L M ++ P+ ITFN L+ + K + + M R + TY ++ +
Sbjct: 235 LRGMTKRKIK--PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGM 497
C D+ R + ME KG PD +YT +I+G +++DA+ F+EM KG+
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 161/372 (43%), Gaps = 19/372 (5%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYGILL 195
W A+ ++ + R G +S FN LD+ F +++ +P +++ + LL
Sbjct: 33 WVRAFCNYREILRNGLHSLQ---FNEALDL------FTHMVES-RPLPSIID---FTKLL 79
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFG 254
N A + I + D + G DL L+ C+ +A +F + K F
Sbjct: 80 NVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFE 139
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
DI T ++NG+C+ + EA +++ +PD V Y T +++L K G + AL L
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
F M G +PDVV +++ LC R +A +LR M R P+V T+N+LI K
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 375 IKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMST 431
+ E +EM + S PN T+ L+ +E + ME GC
Sbjct: 260 EGKFLDAEELYNEMIRM--SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 432 DTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHE 491
Y ++ + D + EM +KG+ + +YT +I G G+ A F
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 492 MRLKGMVPEPRT 503
M +G+ P RT
Sbjct: 378 MVSRGVPPNIRT 389
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 149/320 (46%), Gaps = 15/320 (4%)
Query: 117 ELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELI 176
++ + L+ + N R W A + + +++ P FNA++D + +F++
Sbjct: 211 DVVMYTSLVNGLCNSGR--WRDADSLLRGMTKR-KIKPDVITFNALIDAFVKEGKFLDAE 267
Query: 177 QVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWL 233
++++EM + N TY L+N + V+EA +F + G D+ A+ +L+
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Query: 234 CRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
C+ K V+ A + F+E + + T ++ G+ +G A+ + ++ P+
Sbjct: 328 CKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Query: 293 VTYATFVNALTKKGKLGTALRLFQAMWEK---GRKPDVVTCNCIIDALCFKKRIPEALEV 349
TY ++ L GK+ AL +F+ M ++ G P++ T N ++ LC+ ++ +AL V
Sbjct: 388 RTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMV 447
Query: 350 LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL 409
+M+ R + TY +I+ +CK +++ + K PN +T+ ++ L
Sbjct: 448 FEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK--PNVVTYTTMISGL 505
Query: 410 KK---PEEVPWVLERMERNG 426
+ E + +M+ +G
Sbjct: 506 FREGLKHEAHVLFRKMKEDG 525
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 177/383 (46%), Gaps = 46/383 (12%)
Query: 160 NAILDVLGRARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIGVFDRRKE 216
N +L+ R + + +M L +E T+G LLN + V +A+ +FD+
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 217 FGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYE 275
G ++ + ++ LC+ K V+ A + EK+ G D+ T N +++G C G +
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 276 AKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIID 335
A R + K + PD T+ ++A K+G++ A ++ M + PD+VT + +I
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 336 ALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN--- 392
LC R+ EA E+ M ++GC P+V TY+ LI CK K++E + EM Q+
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 393 ----------GSCL--------------------PNEITFNYLLKSL---KKPEEVPWVL 419
G C PN IT+N LL L K E+ +L
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWE---EMEKKGMGPDQRSYTVMIHGL 476
M++NG TYN+I++ +V W+ + +G+ PD +YT M+ GL
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCK---AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Query: 477 YDKGRLEDALSYFHEMRLKGMVP 499
Y KG +A + F +M+ G++P
Sbjct: 477 YKKGLRREADALFRKMKEDGILP 499
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 141/299 (47%), Gaps = 6/299 (2%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+++++ +F + L ++ F LL + + K +V +E + +++ T NI
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
+LN +C + A F +IK EP VT+ + +N + ++ AL +F M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
KP+VV N IID LC K++ AL++L M+ G P+V TYNSLI LC R
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVILK 439
+ M ++ P+ TFN L+ + K E E M R TY++++
Sbjct: 242 RMVSCMTKR--EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ D+ + M KG PD +Y+++I+G ++E + F EM +G+V
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 13/271 (4%)
Query: 136 WEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEK 189
W A +++ Y P FNA++D + R E + ++EM PD+V
Sbjct: 237 WSDATRMVSCMTKREIY-PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV--- 292
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFES 248
TY +L+ ++EA +F G D+ + L+ C+ K VE + F E
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
+ + T I++ G+C G + A+ ++ ++ P+ +TY ++ L GK+
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
AL + M + G D+VT N II +C + +A ++ + +G +P++ TY ++
Sbjct: 413 EKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTM 472
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNE 399
+ L K K + + L +++G LPNE
Sbjct: 473 MLGLYK-KGLRREADALFRKMKEDGI-LPNE 501
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 36/222 (16%)
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+++ + P ++ ++A++K K + L++ M G ++ TCN +++ C +
Sbjct: 72 MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 343 IPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCL-PNEIT 401
+ AL L +M G P++ T+ SL+ C+ R VY+ L +Q G PN +
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR---VYDALYMFDQMVGMGYKPNVVI 188
Query: 402 FNYLLKSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
+N ++ L K ++V L+ + R MEK G
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNR--------------------------------MEKDG 216
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+GPD +Y +I GL GR DA M + + P+ T
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 171/358 (47%), Gaps = 20/358 (5%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEEA 207
P + FN ++ L + R E ++ + M PD + TYG L+N V+ A
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD---DITYGYLMNGLCKIGRVDAA 341
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILN 265
+F R + ++ F L+ + ++ A+ +G D+ T N ++
Sbjct: 342 KDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ G V A D+ C+P+ +Y V+ K GK+ A + M G KP
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
+ V NC+I A C + RIPEA+E+ REM +GC P+V T+NSLI LC++ ++ L
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 386 DEMEQKNGSCLPNEITFNYLLKS-LKKPE--EVPWVLERMERNGCKMSTDTYNVILKLYV 442
+M + + N +T+N L+ + L++ E E ++ M G + TYN ++K
Sbjct: 518 RDMISE--GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 443 NWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
DK R +E+M + G P S ++I+GL G +E+A+ + EM L+G P+
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 157/367 (42%), Gaps = 15/367 (4%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRY 198
F W + Y +V+ ++ LG F + ++ +M D + E + ++ Y
Sbjct: 97 LFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDY 156
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK--HVEVAETFFESEKNEFGYD 256
A + + + + N++L + H A F++ +
Sbjct: 157 DKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPT 216
Query: 257 IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQ 316
+ T +++ +C + + A +D+ K C P+SV Y T +++L+K ++ AL+L +
Sbjct: 217 LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 276
Query: 317 AMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIK 376
M+ G PD T N +I LC RI EA +++ M RG P+ TY L+ LCKI
Sbjct: 277 EMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIG 336
Query: 377 RMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN-GCKMSTD 432
R++ + + + P + FN L+ + ++ VL M + G
Sbjct: 337 RVDAAKDLFYRIPK------PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
TYN ++ Y +M KG P+ SYT+++ G G++++A + +EM
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 493 RLKGMVP 499
G+ P
Sbjct: 451 SADGLKP 457
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 6/262 (2%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEM-PDLVNEKTYGI--LLNRYAAAHMVEEAIGV 210
P + ++D + + E V +EM D + T G L++ + H + EA+ +
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCV 269
F G D+ F +L+ LC ++ A +E + T N ++N +
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
G + EA++ +++ D +TY + + L + G++ A LF+ M G P ++
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
CN +I+ LC + EA+E +EM RG P++ T+NSLI LC+ R+E +++
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 390 QKNGSCLPNEITFNYLLKSLKK 411
+ P+ +TFN L+ L K
Sbjct: 662 AE--GIPPDTVTFNTLMSWLCK 681
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 40/275 (14%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP------------- 183
+ AY +S +G P + FN ++ + R E +++F EMP
Sbjct: 441 DEAYNVLNEMSADG-LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 184 -------------------DLVNEK------TYGILLNRYAAAHMVEEAIGVFDRRKEFG 218
D+++E TY L+N + ++EA + + G
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 219 ELDDLSAFQNLLLWLCRYKHVEVAETFFESE-KNEFGYDIKTMNIILNGWCVLGNVYEAK 277
D + +L+ LCR V+ A + FE ++ + NI++NG C G V EA
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 278 RFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDAL 337
F K+++ PD VT+ + +N L + G++ L +F+ + +G PD VT N ++ L
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Query: 338 CFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
C + +A +L E G +PN T++ L++ +
Sbjct: 680 CKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 433 TYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
T+ V++K + + D +M K G P+ Y +IH L R+ +AL EM
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278
Query: 493 RLKGMVPEPRT 503
L G VP+ T
Sbjct: 279 FLMGCVPDAET 289
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 175/365 (47%), Gaps = 15/365 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + E + + D M P+LV TYG+++N
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV---TYGVVVNGLCKRG 239
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
+ A+ + ++ + D+ F ++ LC+Y+HV+ A F E E ++ T +
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ C G +A + D+I+ K P+ VT+ ++A K+GK A +L+ M ++
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
PD+ T N +++ C R+ +A ++ M ++ C P+V TYN+LIK CK KR+E
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
E EM + + + +T+ L++ L + V ++M +G TY+++L
Sbjct: 420 TELFREMSHR--GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
N +K ++ M+K + D YT MI G+ G+++D F + LKG+
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 499 PEPRT 503
P T
Sbjct: 538 PNVVT 542
Score = 145 bits (365), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 168/355 (47%), Gaps = 15/355 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
FN +L + + ++F +I + ++M L TY IL+N + + A+ + +
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G + +LL C K + A + + E GY D T +++G +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVD-QMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA +++ C+P+ VTY VN L K+G AL L M + DVV N I
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
ID+LC + + +AL + +EM+ +G PNV TY+SLI LC R + L +M +K
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWV-LERMERNGCKMSTD----TYNVILKLYVNWDCED 448
+ PN +TFN L+ + K E +V E++ + K S D TYN ++ + D D
Sbjct: 327 N--PNLVTFNALIDAFVK--EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
K + +E M K PD +Y +I G R+ED F EM +G+V + T
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 126/263 (47%), Gaps = 12/263 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P FNA++D + +FVE +++D+M PD+ TY L+N + +++
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF---TYNSLVNGFCMHDRLDK 383
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
A +F+ D+ + L+ C+ K VE E F E D T ++
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G G+ A++ +K ++ PD +TY+ ++ L GKL AL +F M + K
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYL 385
D+ +I+ +C ++ + ++ + +G PNV TYN++I LC + ++ Y L
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 386 DEMEQKNGSCLPNEITFNYLLKS 408
+M++ LPN T+N L+++
Sbjct: 564 KKMKEDGP--LPNSGTYNTLIRA 584
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 136/301 (45%), Gaps = 6/301 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+++AIG+F + L + F LL + + K +V + E ++ E + + T NI
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++N +C + A ++K EP VT ++ +N ++ A+ L M E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+PD +T +I L + EA+ ++ M RGC PN+ TY ++ LCK +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNGCKMSTDTYNVILK 439
L++ME + + FN ++ SL K V L + ME G + + TY+ ++
Sbjct: 246 NLLNKMEAAKIE--ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
++ +M +K + P+ ++ +I +G+ +A + +M + + P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 500 E 500
+
Sbjct: 364 D 364
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 91/233 (39%), Gaps = 36/233 (15%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
KL A+ LF M + P +V N ++ A+ K+ + + +M+ + + TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQ-------------KNGSC------------------ 395
LI C+ ++ L +M + NG C
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 396 --LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKV 450
P+ ITF L+ L K E +++RM + GC+ + TY V++ D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 451 RHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +ME + D + +I L ++DAL+ F EM KG+ P T
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 177 QVFDEM------PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLL 230
+VF +M PD++ TY ILL+ +E+A+ VFD ++ D+ + ++
Sbjct: 456 KVFKQMVSDGVPPDIM---TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 231 LWLCRYKHVEVAETFFES-EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
+C+ V+ F S ++ T N +++G C + EA K + +
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAM 318
P+S TY T + A + G + L + M
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREM 601
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 172/362 (47%), Gaps = 15/362 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + E + + D M P+LV TYG+++N
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV---TYGVVVNGLCKRG 239
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
++ A + ++ + ++ + ++ LC+Y+H + A F E E ++ T +
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ C +A R D+I+ K P+ VT+ ++A K+GKL A +L+ M ++
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
PD+ T + +I+ C R+ EA + M ++ C PNV TYN+LI CK KR++
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
E EM Q+ + N +T+ L+ + + V ++M +G + TYN +L
Sbjct: 420 VELFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+K +E +++ M P +Y +MI G+ G++ED F + LKG+
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 499 PE 500
P+
Sbjct: 538 PD 539
Score = 135 bits (339), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 168/354 (47%), Gaps = 13/354 (3%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
FN +L + + ++F +I + ++M L N TY IL+N + + A+ + +
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G + +LL C K + A + + E GY D T +++G +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVD-QMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
EA +++ C+P+ VTY VN L K+G + A L M + +VV + +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
ID+LC + +AL + EM+N+G PNV TY+SLI LC +R L +M ++
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 394 SCLPNEITFNYLLKSLKKPEEVPWVLERMERNGCKMSTD----TYNVILKLYVNWDCEDK 449
+ PN +TFN L+ + K ++ E++ K S D TY+ ++ + D D+
Sbjct: 327 N--PNVVTFNALIDAFVKEGKLVEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 450 VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+H +E M K P+ +Y +I+G R+++ + F EM +G+V T
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 140/301 (46%), Gaps = 6/301 (1%)
Query: 204 VEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES-EKNEFGYDIKTMNI 262
+++AIG+F + L + F LL + + K ++ + E ++ +++ T NI
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 263 ILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKG 322
++N +C + A ++K EP VT ++ +N ++ A+ L M E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 323 RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVY 382
+PD +T +I L + EA+ ++ M RGC PN+ TY ++ LCK ++ +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 383 EYLDEMEQKNGSCLPNEITFNYLLKSLKK---PEEVPWVLERMERNGCKMSTDTYNVILK 439
L++ME N + ++ ++ SL K ++ + ME G + + TY+ ++
Sbjct: 246 NLLNKMEA--AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 440 LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
N++ +M ++ + P+ ++ +I +G+L +A + EM + + P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 500 E 500
+
Sbjct: 364 D 364
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 109/229 (47%), Gaps = 10/229 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P FNA++D + + VE +++DEM PD+ TY L+N + ++E
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF---TYSSLINGFCMHDRLDE 383
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESEKNEFGYDIKTMNIILN 265
A +F+ ++ + L+ C+ K + E E F E + + T +++
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G+ + A+ +K ++ P+ +TY T ++ L K GKL A+ +F+ + +P
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCK 374
+ T N +I+ +C ++ + ++ + +G P+V YN++I C+
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Query: 164 DVLGRARRFVELIQVFDEMPDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDL 223
D L A+ EL+ D P++V TY L+N + A ++E + +F + G + +
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVV---TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 224 SAFQNLLLWLCRYKHVEVAETFFESEKNEFGY-DIKTMNIILNGWCVLGNVYEAKRFWKD 282
+ L+ + + + A+ F+ ++ + +I T N +L+G C G + +A ++
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 283 IIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKR 342
+ +SK EP TY + + K GK+ LF ++ KG KPDV+ N +I C K
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 343 IPEALEVLREMKNRGCLPNVTT 364
EA + R+M+ G LP+ T
Sbjct: 556 KEEADALFRKMREDGPLPDSGT 577
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 93/233 (39%), Gaps = 44/233 (18%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
KL A+ LF M + P + N ++ A+ K+ + + +M+ G N+ TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQ-------------KNGSC------------------ 395
LI C+ ++ L +M + NG C
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 396 --LPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE--- 447
P+ ITF L+ L K E +++RM + GC+ + TY V+ VN C+
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV----VNGLCKRGD 240
Query: 448 -DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D + +ME + + Y+ +I L +DAL+ F EM KG+ P
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
>sp|Q9LFM6|PP375_ARATH Pentatricopeptide repeat-containing protein At5g11310,
mitochondrial OS=Arabidopsis thaliana GN=At5g11310 PE=2
SV=1
Length = 602
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 215/457 (47%), Gaps = 28/457 (6%)
Query: 94 VQNILKTCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYS 153
+ N+L+ V +E AL++ + + +L+ + +R ++ FKW + ++
Sbjct: 73 ISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFT 132
Query: 154 PGSNVFNAILDVLGRARRF-VELIQVF-----DEMPDLVNEKTYGILLNRYAAAHMVEEA 207
++F+++++ L +AR F + VF DE +LV+ T+ +L+ RYA A MV++A
Sbjct: 133 LSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQA 192
Query: 208 IGVFDRRKEFGEL----DDLSAFQNLLLWLCRYKHVEVAETFFE----SEKNEFGYDIKT 259
I F+ + + + +L + LL LC+ HV A + E + + + ++
Sbjct: 193 IRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRI 252
Query: 260 MNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMW 319
NI+LNGW + +A++ W+++ +P VTY T + + ++ A+ + + M
Sbjct: 253 FNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMK 312
Query: 320 EKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRME 379
+ + + N IID L R+ EAL ++ P + TYNSL+K+ CK +
Sbjct: 313 MAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLP 372
Query: 380 TVYEYLDEMEQKNGSCLPNEITFNYLLKSLK---KPEEVPWVLERMERNGCKMSTDTYNV 436
+ L M + P T+N+ K K EE + ++ G TY++
Sbjct: 373 GASKILKMMMTRGVD--PTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHL 430
Query: 437 ILKLYVNWDCEDK----VRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
ILK+ CED +EM+ +G+ PD + T++IH L LE+A F
Sbjct: 431 ILKML----CEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNA 486
Query: 493 RLKGMVPEPRTGILVNDMNIKLKERGEQGKKVIKLTS 529
+G++P+ T ++ D ++ K + K++ L S
Sbjct: 487 VRRGIIPQYITFKMI-DNGLRSKGMSDMAKRLSSLMS 522
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 174/376 (46%), Gaps = 16/376 (4%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
D + AY+ + + G P +N+I+ L +A+ + ++V + M PD +
Sbjct: 211 DSDKAYSTYHEMLDRG-ILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM-- 267
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
TY +L+ Y ++ +EAIG + + G D+ + L+ +LC+ A F+S
Sbjct: 268 -TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 249 -EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGK 307
K +I T +L G+ G + E ++++ PD ++ + A K+GK
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 308 LGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNS 367
+ A+ +F M ++G P+ VT +I LC R+ +A+ +M + G P YNS
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEV---PWVLERMER 424
LI LC + E E + EM + G CL N I FN ++ S K V + E M R
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDR-GICL-NTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
G K + TYN ++ Y D+ M G+ P+ +Y+ +I+G R+ED
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 485 ALSYFHEMRLKGMVPE 500
AL F EM G+ P+
Sbjct: 565 ALVLFKEMESSGVSPD 580
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 151/358 (42%), Gaps = 44/358 (12%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
PDL TYGIL+ A ++ + G D AF LL LC K A
Sbjct: 85 PDLC---TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 243 ETFFESEKNEFGY--DIKTMNIILNGWCVLGNVYEAKRF---WKDIIKSKCEPDSVTYAT 297
E G ++ + NI+L G C EA D PD V+Y T
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 298 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 357
+N K+G A + M ++G PDVVT N II ALC + + +A+EVL M G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 358 CLPNVTTYNSLIKHLCK----------IKRMET--------VYEYLDEMEQKNGSCLPNE 399
+P+ TYNS++ C +K+M + Y L + KNG C+
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 400 ITFNYLLKSLKKPE------------------EVPWVLERMERNGCKMSTDTYNVILKLY 441
F+ + K KPE E+ +L+ M RNG +++++ Y
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D+ + +M ++G+ P+ +Y +I L GR+EDA+ YF +M +G+ P
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 109/249 (43%), Gaps = 5/249 (2%)
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALE- 348
PD TY + + G+L + +KG + D + ++ LC KR +A++
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 349 VLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM-EQKNGSCLPNEITFNYLLK 407
VLR M GC+PNV +YN L+K LC R + E L M + + G P+ +++ ++
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 408 SLKK---PEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
K ++ M G TYN I+ DK M K G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKERGEQGKKV 524
D +Y ++HG G+ ++A+ + +MR G+ P+ T L+ D K E K
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 525 IKLTSLGLK 533
+T GLK
Sbjct: 325 DSMTKRGLK 333
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 170/391 (43%), Gaps = 31/391 (7%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD--------LVNE 188
+A F K R+ +P + + A++ +L ++ R + + F++M D + N
Sbjct: 389 QAMLVFSKM--RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 189 KTYGIL-LNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE 247
+G+ N++ A E + + DR G + F +++ C+ V +E FE
Sbjct: 447 LIHGLCTCNKWERAE--ELILEMLDR----GICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 248 -SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ ++ T N ++NG+C+ G + EA + ++ +P++VTY+T +N K
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
++ AL LF+ M G PD++T N I+ L +R A E+ + G ++TYN
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPN----EITFNYLLKSLKKP---EEVPWVL 419
++ LCK K + D ++ CL + TFN ++ +L K +E +
Sbjct: 621 IILHGLCKNKLTD------DALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
NG + TY ++ + + +++ + ME G D ++ L +
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 734
Query: 480 GRLEDALSYFHEMRLKGMVPEPRTGILVNDM 510
G + A +Y + K E T L D+
Sbjct: 735 GEITRAGTYLSMIDEKHFSLEASTASLFIDL 765
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 182/429 (42%), Gaps = 82/429 (19%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGV 210
P + FN ++ L RA + I + ++MP + +EKT+ ++ Y ++ A+ +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 211 FDRRKEFG-----------------------------ELD-------DLSAFQNLLLWLC 234
++ EFG E+ D F L+ LC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 235 RYKHVEVAETFFESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDS 292
+ HV+ A + E GYD + T N +++G C LG V EA +I C P++
Sbjct: 307 KAGHVKHAIEIMDVMLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Query: 293 VTYATFVN----------------ALTKKGKLG-------------------TALRLFQA 317
VTY T ++ LT KG L A+ LF+
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M KG +PD T N +ID+LC K ++ EAL +L++M+ GC +V TYN+LI CK +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTY 434
E DEME S N +T+N L+ L ++ E+ ++++M G K TY
Sbjct: 486 TREAEEIFDEMEVHGVS--RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
N +L + K + M G PD +Y +I GL GR+E A +++
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 495 KGMVPEPRT 503
KG+ P
Sbjct: 604 KGINLTPHA 612
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 195/442 (44%), Gaps = 54/442 (12%)
Query: 100 TCSVSTKGEIEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVF 159
+ ++S AL+ ++ L D L R + D AA F S++ ++SP ++
Sbjct: 33 SSTISFASPHSAALSSTDVKLLDSL------RSQPDDSAALRLFNLASKKPNFSPEPALY 86
Query: 160 NAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGVFD-RRK 215
IL LGR+ F ++ ++ ++M + T+ IL+ YA + +E + V D
Sbjct: 87 EEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMID 146
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
EFG D + +L L +++ E ++ + +G D+ T N+++ C +
Sbjct: 147 EFGLKPDTHFYNRMLNLLVDGNSLKLVE-ISHAKMSVWGIKPDVSTFNVLIKALCRAHQL 205
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
A +D+ PD T+ T + ++G L ALR+ + M E G V+ N I
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265
Query: 334 IDALCFKKRIPEALEVLREMKNR------------------------------------G 357
+ C + R+ +AL ++EM N+ G
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325
Query: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EE 414
P+V TYNS+I LCK+ ++ E LD+M ++ C PN +T+N L+ +L K EE
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD--CSPNTVTYNTLISTLCKENQVEE 383
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+ + G T+N +++ +EEM KG PD+ +Y ++I
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 475 GLYDKGRLEDALSYFHEMRLKG 496
L KG+L++AL+ +M L G
Sbjct: 444 SLCSKGKLDEALNMLKQMELSG 465
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 164/397 (41%), Gaps = 82/397 (20%)
Query: 148 REGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAA 201
+EG Y P +N+++ L + E ++V D+M P+ V TY L++
Sbjct: 323 QEG-YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV---TYNTLISTLCKE 378
Query: 202 HMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES------EKNEFGY 255
+ VEEA + G L D+ F +L+ LC ++ VA FE E +EF Y
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 256 D------------------------------IKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
+ + T N +++G+C EA+ + ++
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
+SVTY T ++ L K ++ A +L M +G+KPD T N ++ C I +
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
A ++++ M + GC P++ TY +LI LCK R+E + L ++ K
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK-------------- 604
Query: 406 LKSLKKPEEVPWVLERMERNGCKMSTDTYN-VILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
G ++ YN VI L+ + + E +E+ P
Sbjct: 605 --------------------GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Query: 465 DQRSYTVMIHGLYD-KGRLEDALSYFHEMRLKGMVPE 500
D SY ++ GL + G + +A+ + E+ KG VPE
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 170/357 (47%), Gaps = 15/357 (4%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + E + + D M PDLV TYG ++N
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLV---TYGAVVNGLCKRG 232
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
+ A+ + ++ + ++ + ++ LC+Y+H + A F E E ++ T +
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++ C G +A R D+I+ K P+ VT++ ++A KKGKL A +L++ M ++
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
P++ T + +I+ C R+ EA ++L M + CLPNV TYN+LI CK KR++
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
E EM Q+ + N +T+ L+ + + V ++M G + TYN++L
Sbjct: 413 MELFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
K +E +++ M PD +Y +MI G+ G+ + YF LK
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVASALK 527
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 166/389 (42%), Gaps = 48/389 (12%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV----NEKTYGILLNRYAAAHMVEEAIGVFDRR 214
F+ +L + + +F +L+ F E +++ N TY IL+N + + A+ + +
Sbjct: 81 FSKLLSAIAKMNKF-DLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKM 139
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGN 272
+ G D+ +LL C + A + + E GY D T +++G +
Sbjct: 140 MKLGYEPDIVTLNSLLNGFCHGNRISDAVALVD-QMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 273 VYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNC 332
EA +++ C+PD VTY VN L K+G AL L M + +VV +
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
+ID+LC + +AL + EM+N+G PNV TY+SLI LC R L +M ++
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 393 GSCLPNEITFNYLLKS--------------------------------------LKKPEE 414
+ PN +TF+ L+ + L + E
Sbjct: 319 IN--PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 415 VPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIH 474
+LE M R C + TYN ++ + DK + EM ++G+ + +YT +IH
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 475 GLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
G + ++A F +M G+ P T
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILT 465
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 167/363 (46%), Gaps = 16/363 (4%)
Query: 152 YSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVE 205
Y P N++L+ R E + + D+M PD V T+ L++ +
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV---TFTTLVHGLFQHNKAS 197
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIIL 264
EA+ + +R G DL + ++ LC+ ++A + EK + D+ N I+
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
+G C ++ +A + + +PD TY ++ L G+ A RL M EK
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREM-KNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
PD+V N +IDA + ++ EA ++ EM K++ C P+V YN+LIK CK KR+E E
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKL 440
EM Q+ + N +T+ L+ + + V ++M +G TYN++L
Sbjct: 378 VFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
N + +E M+K+ M D +YT MI L G++ED F + LKG+ P
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 501 PRT 503
T
Sbjct: 496 VVT 498
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 185/404 (45%), Gaps = 26/404 (6%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAH 202
E Y P + F ++ L + + E + + + M PDLV TYG ++N
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV---TYGAVINGLCKRG 229
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMN 261
+ A+ + ++ ++ D+ + ++ LC+YKH++ A + F + E D+ T N
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWE- 320
+++ C G +A R D+++ PD V + ++A K+GKL A +L+ M +
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 321 KGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMET 380
K PDVV N +I C KR+ E +EV REM RG + N TY +LI + + +
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409
Query: 381 VYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
+M P+ +T+N LL L E V E M++ K+ TY +
Sbjct: 410 AQMVFKQMVSD--GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 438 LKLYVNWDCEDKVRHTWE---EMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++ KV W+ + KG+ P+ +YT M+ G KG E+A + F EM+
Sbjct: 468 IEALCK---AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 495 KGMVPEPRTGILVNDMNIKLKERGEQGKK--VIKLTSLGLKGNA 536
G P P +G + +L++ E + ++ S G G+A
Sbjct: 525 DG--PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDA 566
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 164/355 (46%), Gaps = 14/355 (3%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPDLV---NEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
F+ +L + + +F +I + ++M +L N TY I +N + + A+ + +
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY--DIKTMNIILNGWCVLGNV 273
+ G + +LL C + A + + E GY D T +++G
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVD-QMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR-KPDVVTCNC 332
EA + ++ C+PD VTY +N L K+G+ AL L M EKG+ + DVV N
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYNT 255
Query: 333 IIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKN 392
IID LC K + +A ++ +M+ +G P+V TYN LI LC R L +M +KN
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 393 GSCLPNEITFNYLLKSLKKP----EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCED 448
+ P+ + FN L+ + K E E ++ C YN ++K + + +
Sbjct: 316 IN--PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 449 KVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ + EM ++G+ + +YT +IHG + ++A F +M G+ P+ T
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 5/232 (2%)
Query: 275 EAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCII 334
+A + D++KS+ P V ++ ++A+ K K + L + M G ++ T + I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 335 DALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGS 394
+ C + ++ AL +L +M G P++ T NSL+ C R+ +D+M +
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 395 CLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVR 451
P+ +TF L+ L K E ++ERM GC+ TY ++ D
Sbjct: 178 --PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 452 HTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +MEK + D Y +I GL ++DA F++M KG+ P+ T
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 178/375 (47%), Gaps = 13/375 (3%)
Query: 133 RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEK 189
R D EA F K ++ + P + ++ L + R E + + EM + N
Sbjct: 303 RID-EAMDLFVKM--KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFE-S 248
TY +L++ + E+A + + E G + ++ + L+ C+ +E A E
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
E + + +T N ++ G+C NV++A +++ K PD VTY + ++ + G
Sbjct: 420 ESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSL 368
+A RL M ++G PD T +ID+LC KR+ EA ++ ++ +G PNV Y +L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 369 IKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERN 425
I CK +++ + L++M KN CLPN +TFN L+ L K +E + E+M +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKN--CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 426 GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDA 485
G + + T +++ + D +++M G PD +YT I +GRL DA
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 486 LSYFHEMRLKGMVPE 500
+MR G+ P+
Sbjct: 657 EDMMAKMRENGVSPD 671
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 160/352 (45%), Gaps = 18/352 (5%)
Query: 159 FNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRK 215
+N +L+ L R E+ QV+ EM + N TY ++N Y VEEA +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 216 EFGELDDLSAFQNLLLWLCRYKHVEVAETFFE------SEKNEFGYDIKTMNIILNGWCV 269
E G D + +L++ C+ K ++ A F +NE Y +++G CV
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAY-----THLIHGLCV 300
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVT 329
+ EA + + +C P TY + +L + AL L + M E G KP++ T
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 330 CNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEME 389
+ID+LC + + +A E+L +M +G +PNV TYN+LI CK +E + ++ ME
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 390 QKNGSCLPNEITFNYLLKSLKKP--EEVPWVLERMERNGCKMSTDTYNVILKLYVNWDCE 447
+ S PN T+N L+K K + VL +M TYN ++
Sbjct: 421 SRKLS--PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
D M +G+ PDQ +YT MI L R+E+A F + KG+ P
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 173/377 (45%), Gaps = 20/377 (5%)
Query: 134 FDWEAAYTFFKWVSREGDYSPGSNVFNAILDVL---GRARRFVELIQVFDEMPDLVNEKT 190
D + A F W+S+ Y + ++L +L G ++ + + D V +
Sbjct: 101 LDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDAL 160
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHV-EVAETFFESE 249
Y + L R D R E + + LL L R+ V E+ + + E
Sbjct: 161 YVLDLCRKMNK----------DERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEML 210
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
+++ +I T N ++NG+C LGNV EA ++ I+++ +PD TY + + ++ L
Sbjct: 211 EDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
+A ++F M KG + + V +I LC +RI EA+++ +MK+ C P V TY LI
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNG 426
K LC +R + EME+ PN T+ L+ SL K E+ +L +M G
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIK--PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ TYN ++ Y + E ME + + P+ R+Y +I G Y K + A+
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG-YCKSNVHKAM 447
Query: 487 SYFHEMRLKGMVPEPRT 503
++M + ++P+ T
Sbjct: 448 GVLNKMLERKVLPDVVT 464
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 168/373 (45%), Gaps = 12/373 (3%)
Query: 144 KWVSREGDYSPGSNVFNAILDVLGRARR--FVELIQVFDEMP---DLVNEKTYGILLNRY 198
++VS+ + + F ++G +R +VF+EMP NE Y L++
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 199 AAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLC-RYKHVEVAETFFESEKNEFGYDI 257
A ++EA+ +F + K+ + + L+ LC + E E E+ +I
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 258 KTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQA 317
T ++++ C +A+ +++ P+ +TY +N K+G + A+ + +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M + P+ T N +I C K + +A+ VL +M R LP+V TYNSLI C+
Sbjct: 419 MESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTY 434
++ Y L M + +P++ T+ ++ SL K+ EE + + +E+ G + Y
Sbjct: 478 FDSAYRLLSLMNDRG--LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 435 NVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRL 494
++ Y D+ E+M K P+ ++ +IHGL G+L++A +M
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 495 KGMVPEPRTGILV 507
G+ P T ++
Sbjct: 596 IGLQPTVSTDTIL 608
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 170/385 (44%), Gaps = 25/385 (6%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPD--LVNEK-TYGILLNRYAAAHMVEEAIGV 210
P +N+++D R+ F ++ M D LV ++ TY +++ + VEEA +
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES--EKNEFGYDIKTMNIILNGWC 268
FD ++ G ++ + L+ C+ V+ A E KN + T N +++G C
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL-TFNALIHGLC 578
Query: 269 VLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVV 328
G + EA + ++K +P T ++ L K G A FQ M G KPD
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638
Query: 329 TCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEM 388
T I C + R+ +A +++ +M+ G P++ TY+SLIK + + ++ L M
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Query: 389 EQKNGSCLPNEITFNYLLKSLKKPEEVPWVLER-MERNGCKMSTDTYNVILKLYVNWDCE 447
++ C P++ TF L+K L E+ + ++ E C MS N
Sbjct: 699 --RDTGCEPSQHTFLSLIKHLL---EMKYGKQKGSEPELCAMS------------NMMEF 741
Query: 448 DKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF-HEMRLKGMVPEPRTGIL 506
D V E+M + + P+ +SY +I G+ + G L A F H R +G+ P
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNA 801
Query: 507 VNDMNIKLKERGEQGKKVIKLTSLG 531
+ KLK+ E K V + +G
Sbjct: 802 LLSCCCKLKKHNEAAKVVDDMICVG 826
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 174/391 (44%), Gaps = 43/391 (10%)
Query: 135 DWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNE 188
++++AY ++ G P + +++D L +++R E +FD + P++V
Sbjct: 477 NFDSAYRLLSLMNDRG-LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV-- 533
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
Y L++ Y A V+EA + ++ L + F L+ LC ++ A T E
Sbjct: 534 -MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-TLLEE 591
Query: 249 EKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
+ + G + T I+++ G+ A ++ ++ S +PD+ TY TF+ ++G
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+L A + M E G PD+ T + +I + A +VL+ M++ GC P+ T+
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711
Query: 367 SLIKHL---------------CKIKRM---ETVYEYLDEMEQKNGSCLPNEITFNYLL-- 406
SLIKHL C + M +TV E L++M + S PN ++ L+
Sbjct: 712 SLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH--SVTPNAKSYEKLILG 769
Query: 407 ----KSLKKPEEVPWVLERMERN-GCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKG 461
+L+ E+V + M+RN G S +N +L ++ ++M G
Sbjct: 770 ICEVGNLRVAEKV---FDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826
Query: 462 MGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
P S V+I GLY KG E S F +
Sbjct: 827 HLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 132/350 (37%), Gaps = 69/350 (19%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDLVNEKTYG---ILLNRYAAAHMVEEAIGV 210
P S FNA++ L + E + ++M + + T IL++R + A
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILNGWCV 269
F + G D + + CR + AE + +N D+ T + ++ G+
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 270 LGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL--TKKGK----------------LGTA 311
LG A K + + CEP T+ + + L K GK T
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 312 LRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM-KNRGCLPNVTTYNSLIK 370
+ L + M E P+ + +I +C + A +V M +N G P+ +N+L+
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 371 HLCKIKRMETVYEYLDEM-----------------------EQKNGSCLPNEITFNYLLK 407
CK+K+ + +D+M E++ G+ + F LL+
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSV-----FQNLLQ 859
Query: 408 SLKKPEEVPW------------------VLERMERNGCKMSTDTYNVILK 439
+E+ W + ME+NGCK S+ TY+++++
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 176/376 (46%), Gaps = 22/376 (5%)
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEA 207
+ SP FN ++ L + R I+VF MP+ L + TY L++ ++EA
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCR----YKHVEVAETFF--ESEKNEFGYDIKTMN 261
+ + D + G + L+ LC+ + ++ + F NE Y N
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY-----N 296
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
+++G C+ G + +A + ++ SKC P+ VTY T +N L K+ + A+RL +M E+
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G + + +I L + + EA+ + R+M +GC PN+ Y+ L+ LC+ +
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERMERNGCKMSTDTYNVIL 438
E L+ M CLPN T++ L+K K EE V + M++ GC + Y+V++
Sbjct: 417 KEILNRMIA--SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ W +M G+ PD +Y+ +I GL G ++ AL +HEM +
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ--- 531
Query: 499 PEPRTGILVNDMNIKL 514
EP++ V NI L
Sbjct: 532 EEPKSQPDVVTYNILL 547
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 176/374 (47%), Gaps = 14/374 (3%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGILLNRY 198
FK + G + G + +++++ + F + ++ + ++ E+++ ++ Y
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAY 122
Query: 199 AAAHMVEEAIGVFDRR-KEFGELDDLSAFQNLLLWLCR----YKHVEVAETFFESEKN-E 252
AH+ ++A+ +F R EF + +F ++L + ++ +E + S N
Sbjct: 123 GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
+ + N+++ C L V A ++ + + KC PD TY T ++ L K+ ++ A+
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
L M +G P V N +ID LC K + +++ M +GC+PN TYN+LI L
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 373 CKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKM 429
C +++ L+ M + C+PN++T+ L+ L ++ + +L ME G +
Sbjct: 303 CLKGKLDKAVSLLERM--VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 430 STDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYF 489
+ Y+V++ ++ W +M +KG P+ Y+V++ GL +G+ +A
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 490 HEMRLKGMVPEPRT 503
+ M G +P T
Sbjct: 421 NRMIASGCLPNAYT 434
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 170/354 (48%), Gaps = 15/354 (4%)
Query: 159 FNAILDVLGRARRFVELIQVFD-------EMPDLVNEKTYGILLNRYAAAHMVEEAIGVF 211
FN++L+V+ + ++ +D M N ++ +++ V+ AI VF
Sbjct: 151 FNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVF 210
Query: 212 DRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTM-NIILNGWCVL 270
E L D + L+ LC+ + ++ A + ++E + N++++G C
Sbjct: 211 RGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKK 270
Query: 271 GNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTC 330
G++ + ++ C P+ VTY T ++ L KGKL A+ L + M P+ VT
Sbjct: 271 GDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTY 330
Query: 331 NCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQ 390
+I+ L ++R +A+ +L M+ RG N Y+ LI L K + E +M +
Sbjct: 331 GTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE 390
Query: 391 KNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILK-LYVNWDC 446
K C PN + ++ L+ L KP E +L RM +GC + TY+ ++K + C
Sbjct: 391 KG--CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLC 448
Query: 447 EDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
E+ V W+EM+K G ++ Y+V+I GL GR+++A+ + +M G+ P+
Sbjct: 449 EEAV-QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 151/340 (44%), Gaps = 71/340 (20%)
Query: 154 PGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVEEAIGV 210
P + +++ L + RR + +++ M + +N+ Y +L++ EEA+ +
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 211 FDRRKEFGELDDLSAFQNLLLWLCR-----------------------YKHVEVAETFFE 247
+ + E G ++ + L+ LCR Y + + + FF+
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 248 S------------------EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCE 289
+ +N+F Y +++++G C +G V EA W ++ +
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCY-----SVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499
Query: 290 PDSVTYATFVNALTKKGKLGTALRLFQAMW---EKGRKPDVVTCNCIIDALCFKKRIPEA 346
PD+V Y++ + L G + AL+L+ M E +PDVVT N ++D LC +K I A
Sbjct: 500 PDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRA 559
Query: 347 LEVLREMKNRGCLPNVTTYNSLIKHL------CKIKR--METVYEYLDEMEQKNGSC--- 395
+++L M +RGC P+V T N+ + L C R +E + L + ++ +G+C
Sbjct: 560 VDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIV 619
Query: 396 --------LPNEITFNYLLKSLKKPEEVPWVLERMERNGC 427
P T+ +++ + KP+++ +++ RN C
Sbjct: 620 EVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKCWRNLC 659
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 193/425 (45%), Gaps = 46/425 (10%)
Query: 121 TDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFD 180
T +++N R R A++ + + G Y P + +FN +L+ L R E +++ D
Sbjct: 125 TLSIMINCFCRCR-KLSYAFSTMGKIMKLG-YEPDTVIFNTLLNGLCLECRVSEALELVD 182
Query: 181 EM------PDLV--------------------------------NEKTYGILLNRYAAAH 202
M P L+ NE TYG +LN +
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242
Query: 203 MVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMN 261
A+ + + +E D + ++ LC+ ++ A F E E F DI T N
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 262 IILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEK 321
++ G+C G + + +D+IK K P+ VT++ +++ K+GKL A +L + M ++
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 322 GRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETV 381
G P+ +T N +ID C + R+ EA++++ M ++GC P++ T+N LI CK R++
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 382 YEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVIL 438
E EM + + N +T+N L++ K E + + M + +Y ++L
Sbjct: 423 LELFREMSLR--GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 439 KLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMV 498
+ +K + ++EK M D Y ++IHG+ + +++DA F + LKG+
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 499 PEPRT 503
+ R
Sbjct: 541 LDARA 545
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 139/303 (45%), Gaps = 6/303 (1%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNII 263
++A+ +F + L + F L + + K E+ + E + I T++I+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
+N +C + A I+K EPD+V + T +N L + ++ AL L M E G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
KP ++T N +++ LC ++ +A+ ++ M G PN TY ++ +CK + E
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVP---WVLERMERNGCKMSTDTYNVILKL 440
L +ME++N + + ++ ++ L K + + ME G K TYN ++
Sbjct: 250 LLRKMEERNIKL--DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ N D +M K+ + P+ +++V+I +G+L +A EM +G+ P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 501 PRT 503
T
Sbjct: 368 TIT 370
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 144/324 (44%), Gaps = 12/324 (3%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP 183
LI N R+D + A + R+ SP F+ ++D + + E Q+ EM
Sbjct: 304 LIGGFCNAGRWD-DGAKLLRDMIKRK--ISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 184 D---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVE 240
N TY L++ + + +EEAI + D G D+ F L+ C+ ++
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 241 VA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFV 299
E F E + T N ++ G+C G + AK+ +++++ + PD V+Y +
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 300 NALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCL 359
+ L G+L AL +F + + + D+ II +C ++ +A ++ + +G
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 360 PNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW-- 417
+ YN +I LC+ + +M ++ + P+E+T+N L+++ ++
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHA--PDELTYNILIRAHLGDDDATTAA 598
Query: 418 -VLERMERNGCKMSTDTYNVILKL 440
++E M+ +G T +++ +
Sbjct: 599 ELIEEMKSSGFPADVSTVKMVINM 622
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 45/262 (17%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + +N+++D + R E IQ+ D M PD++ T+ IL+N Y A+ +++
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM---TFNILINGYCKANRIDD 421
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIILN 265
+ +F G + + + L+ C+ +EVA+ F E DI + I+L+
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCE-----------------------------P------ 290
G C G + +A + I KSK E P
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 291 DSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
D+ Y ++ L +K L A LF+ M E+G PD +T N +I A A E++
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELI 601
Query: 351 REMKNRGCLPNVTTYNSLIKHL 372
EMK+ G +V+T +I L
Sbjct: 602 EEMKSSGFPADVSTVKMVINML 623
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 183/380 (48%), Gaps = 11/380 (2%)
Query: 128 VINRY--RFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD- 184
+IN Y + ++F + G + PGSN FN +L + + F + F+E
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNG-FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK 158
Query: 185 -LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA- 242
+++ ++GIL+ A +E++ + EFG ++ + L+ C+ +E A
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 243 ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNAL 302
+ FFE K + +T +++NG G + ++ + + P+ TY +N L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 303 TKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNV 362
K G+ A ++F M E+G ++VT N +I LC + ++ EA +V+ +MK+ G PN+
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 363 TTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---VL 419
TYN+LI C + ++ +++ + S P+ +T+N L+ + + ++
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS--PSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 420 ERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDK 479
+ ME G K S TY +++ + D +K ME+ G+ PD +Y+V+IHG K
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 480 GRLEDALSYFHEMRLKGMVP 499
G++ +A F M K P
Sbjct: 457 GQMNEASRLFKSMVEKNCEP 476
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 151/325 (46%), Gaps = 7/325 (2%)
Query: 189 KTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFES 248
+ Y +++N Y + + +I F+ + G + + F LL ++ +FF
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154
Query: 249 EKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKL 308
K++ D+ + I++ G C G + ++ ++ + P+ V Y T ++ KKG++
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 309 GTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIP-EALEVLREMKNRGCLPNVTTYNS 367
A LF M + G + T +I+ L FK + + E+ +M+ G PN+ TYN
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGL-FKNGVKKQGFEMYEKMQEDGVFPNLYTYNC 273
Query: 368 LIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMER 424
++ LCK R + ++ DEM ++ SC N +T+N L+ L K E V+++M+
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSC--NIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 425 NGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLED 484
+G + TYN ++ + K +++ +G+ P +Y +++ G KG
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 485 ALSYFHEMRLKGMVPEPRTGILVND 509
A EM +G+ P T ++ D
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILID 416
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 163/365 (44%), Gaps = 11/365 (3%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E +SP ++ ++D + + +F EM L NE+TY +L+N + +
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKK 250
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIIL 264
+ ++++ +E G +L + ++ LC+ + A + F E + +I T N ++
Sbjct: 251 QGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G C + EA + + P+ +TY T ++ GKLG AL L + + +G
Sbjct: 311 GGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
P +VT N ++ C K A ++++EM+ RG P+ TY LI + ME +
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Query: 385 LDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
ME+ +P+ T++ L+ + E + + M C+ + YN ++ Y
Sbjct: 431 RLSMEEL--GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGY 488
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ +EME+K + P+ SY MI L + + ++A +M G+ +P
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI--DP 546
Query: 502 RTGIL 506
T IL
Sbjct: 547 STSIL 551
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 159/347 (45%), Gaps = 18/347 (5%)
Query: 106 KGEIEKA------LNQCELTLTDDLIVNVINRYRFDW--EAAYTFFKWVSREGDYSPGSN 157
KGEIEKA + + L + +IN + + + ++ + +G + P
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF-PNLY 269
Query: 158 VFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRR 214
+N +++ L + R + QVFDEM + N TY L+ + EA V D+
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 215 KEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FGYDIKTMNIILNGWCVLGNV 273
K G +L + L+ C + A + K+ + T NI+++G+C G+
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 274 YEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCI 333
A + K++ + +P VTY ++ + + A++L +M E G PDV T + +
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 334 IDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNG 393
I C K ++ EA + + M + C PN YN++I CK + L EME+K
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Query: 394 SCLPNEITFNYLLKSL---KKPEEVPWVLERMERNGCKMSTDTYNVI 437
+ PN ++ Y+++ L +K +E ++E+M +G ST ++I
Sbjct: 510 A--PNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 156/317 (49%), Gaps = 6/317 (1%)
Query: 191 YGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR-YKHVEVAETFFESE 249
Y I+++ ++A+ +F+ + G D+ + +L+ LC K + A+ E
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 250 KNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLG 309
D+ T + +++ + G + EAK + ++I PD++TY + ++ K+ L
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 310 TALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLI 369
A ++F M KG +PD+VT + +I++ C KR+ + + + RE+ ++G +PN TYN+L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 370 KHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVL---ERMERNG 426
C+ ++ E EM + P+ +T+ LL L E+ L E+M+++
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVP--PSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 427 CKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDAL 486
+ YN+I+ N D + + KG+ PD +Y VMI GL KG L +A
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 487 SYFHEMRLKGMVPEPRT 503
F +M+ G P+ T
Sbjct: 546 MLFRKMKEDGCTPDDFT 562
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 150/321 (46%), Gaps = 12/321 (3%)
Query: 190 TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCR----YKHVEVAETF 245
T I++N Y + A V R + G D F L+ C + V + +
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 246 FESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKK 305
E ++ D+ T++ ++NG C+ G V EA +++ +PD VTY +N L K
Sbjct: 167 VEMKQRP---DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 306 GKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTY 365
G AL LF+ M E+ K VV + +ID+LC +AL + EM+ +G +V TY
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 366 NSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERM 422
+SLI LC + + + L EM +N +P+ +TF+ L+ K E + M
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRN--IIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 423 ERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G T TYN ++ + +C + ++ M KG PD +Y+++I+ R+
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 483 EDALSYFHEMRLKGMVPEPRT 503
+D + F E+ KG++P T
Sbjct: 402 DDGMRLFREISSKGLIPNTIT 422
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 12/245 (4%)
Query: 153 SPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILLNRYAAAHMVEE 206
+P + +N+++D + E Q+FD M PD+V TY IL+N Y A V++
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV---TYSILINSYCKAKRVDD 403
Query: 207 AIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA-ETFFESEKNEFGYDIKTMNIILN 265
+ +F G + + + L+L C+ + A E F E + T I+L+
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 266 GWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKP 325
G C G + +A ++ + KS+ Y ++ + K+ A LF ++ +KG KP
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 326 DVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIK-HLCKIKRMETVYEY 384
DVVT N +I LC K + EA + R+MK GC P+ TYN LI+ HL + +V E
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV-EL 582
Query: 385 LDEME 389
++EM+
Sbjct: 583 IEEMK 587
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 11/241 (4%)
Query: 279 FWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALC 338
F K + + E D T +N +K KL A + W+ G +PD +T + +++ C
Sbjct: 92 FCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFC 151
Query: 339 FKKRIPEALEV---LREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC 395
+ R+ EA+ + + EMK R P++ T ++LI LC R+ +D M +
Sbjct: 152 LEGRVSEAVALVDRMVEMKQR---PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQ- 207
Query: 396 LPNEITFNYLLKSLKKPEEVPWVLE---RMERNGCKMSTDTYNVILKLYVNWDCEDKVRH 452
P+E+T+ +L L K L+ +ME K S Y++++ D
Sbjct: 208 -PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266
Query: 453 TWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNI 512
+ EME KG+ D +Y+ +I GL + G+ +D EM + ++P+ T + D+ +
Sbjct: 267 LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 326
Query: 513 K 513
K
Sbjct: 327 K 327
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 99/216 (45%), Gaps = 11/216 (5%)
Query: 142 FFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM------PDLVNEKTYGILL 195
F+ +S +G P + +N ++ ++ + ++F EM P +V TYGILL
Sbjct: 407 LFREISSKG-LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV---TYGILL 462
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNE-FG 254
+ + +A+ +F++ ++ + + ++ +C V+ A + F S ++
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Query: 255 YDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRL 314
D+ T N+++ G C G++ EA ++ + + C PD TY + A L +++ L
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 582
Query: 315 FQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVL 350
+ M G D T +ID L ++ L++L
Sbjct: 583 IEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 174/362 (48%), Gaps = 9/362 (2%)
Query: 149 EGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMPDL---VNEKTYGILLNRYAAAHMVE 205
E + P N +++ L + + E + + D+M + N TYG +LN +
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 206 EAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNEFGYDIKTMNIIL 264
A+ + + +E D + ++ LC++ ++ A F E E +I T NI++
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
G+C G + + +D+IK K P+ VT++ +++ K+GKL A L + M +G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
PD +T +ID C + + +A +++ M ++GC PN+ T+N LI CK R++ E
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 385 LDEMEQKNGSCLPNEITFNYLLKS---LKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
+M + + + +T+N L++ L K + + M + TY ++L
Sbjct: 426 FRKMSLR--GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEP 501
+ +K +E++EK M D Y ++IHG+ + +++DA F + LKG+ P
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543
Query: 502 RT 503
+T
Sbjct: 544 KT 545
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 140/320 (43%), Gaps = 39/320 (12%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N T+ L+N V EA+ + DR E G DL
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI---------------------- 194
Query: 247 ESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKG 306
T+N ++NG C+ G EA +++ C+P++VTY +N + K G
Sbjct: 195 ------------TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
+ A+ L + M E+ K D V + IID LC + A + EM+ +G N+ TYN
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKP---EEVPWVLERME 423
LI C R + + L +M ++ + PN +TF+ L+ S K E + + M
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKIN--PNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 424 RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLE 483
G T TY ++ + + DK + M KG P+ R++ ++I+G R++
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 484 DALSYFHEMRLKGMVPEPRT 503
D L F +M L+G+V + T
Sbjct: 421 DGLELFRKMSLRGVVADTVT 440
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 138/279 (49%), Gaps = 16/279 (5%)
Query: 228 NLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSK 287
+L+L LC+ + E +++ T++I++N +C + A IIK
Sbjct: 105 DLVLALCK-----------QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 153
Query: 288 CEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEAL 347
EP+++T++T +N L +G++ AL L M E G KPD++T N +++ LC + EA+
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 348 EVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLK 407
++ +M GC PN TY ++ +CK + E L +ME++N + + ++ ++
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL--DAVKYSIIID 271
Query: 408 SLKKPEEVP---WVLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGP 464
L K + + ME G + TYN+++ + N D +M K+ + P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 465 DQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPEPRT 503
+ +++V+I +G+L +A EM +G+ P+ T
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 139/304 (45%), Gaps = 9/304 (2%)
Query: 187 NEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF 246
N T+ +L++ + + EA + G D + +L+ C+ H++ A
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 247 ESEKNEFGYD--IKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTK 304
+ ++ G D I+T NI++NG+C + + ++ + D+VTY T + +
Sbjct: 392 DLMVSK-GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 305 KGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTT 364
GKL A LFQ M + P++VT ++D LC +ALE+ +++ ++
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 365 YNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL--KKP-EEVPWVLER 421
YN +I +C +++ ++ + K P T+N ++ L K P E + +
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVK--PGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 422 MERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGR 481
ME +G TYN++++ ++ K EE+++ G D + ++I L D GR
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD-GR 627
Query: 482 LEDA 485
L+ +
Sbjct: 628 LKKS 631
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 156/344 (45%), Gaps = 22/344 (6%)
Query: 124 LIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM- 182
LI N R+D + A + R+ +P F+ ++D + + E ++ EM
Sbjct: 304 LIGGFCNAGRWD-DGAKLLRDMIKRK--INPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 183 -----PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 237
PD + TY L++ + + +++A + D G ++ F L+ C+
Sbjct: 361 HRGIAPDTI---TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 238 HVEVA-ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYA 296
++ E F + D T N ++ G+C LG + AK +++++ K P+ VTY
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 297 TFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNR 356
++ L G+ AL +F+ + + + D+ N II +C ++ +A ++ + +
Sbjct: 478 ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 357 GCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKS-LKKPEEV 415
G P V TYN +I LCK + +ME+ + P+ T+N L+++ L +
Sbjct: 538 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA--PDGWTYNILIRAHLGDGDAT 595
Query: 416 PWV--LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEM 457
V +E ++R C S D + K+ ++ + +++ ++ +M
Sbjct: 596 KSVKLIEELKR--CGFSVDASTI--KMVIDMLSDGRLKKSFLDM 635
>sp|Q9FNG8|PP366_ARATH Putative pentatricopeptide repeat-containing protein At5g06400,
mitochondrial OS=Arabidopsis thaliana GN=At5g06400 PE=3
SV=1
Length = 1030
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 183/418 (43%), Gaps = 48/418 (11%)
Query: 92 INVQNILKTCSVSTKGE-IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREG 150
++VQ I + S S E ++AL + + T +L+V V+ + A FF WV +
Sbjct: 613 MDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRN 672
Query: 151 DYSPGSNVFNAILDVLGRARRFVELIQVFDEMPD---LVNEKTYGILLNRYAAAHMVEEA 207
Y S +N + V G + F ++ +F EM L+ + T+ I++ +Y + A
Sbjct: 673 GYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIA 732
Query: 208 IGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAE---TFFESEKNEFGYDIKTMNIIL 264
I F K+ G + S F+ L+ LC K V E TF E ++ F D + + L
Sbjct: 733 IRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYL 792
Query: 265 NGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRK 324
C +GN +AK + K P +V Y+ ++ AL + GKL AL + +
Sbjct: 793 GCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSL 851
Query: 325 PDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEY 384
D T I+ L + + +AL+ + MK G P V Y SLI + K K++E V E
Sbjct: 852 LDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLET 911
Query: 385 LDEMEQKNGSCLPNEITFNYLL---KSLKKPEEVPWVLERMERNGCKMSTDTYNVILKLY 441
+ME + SC P+ +T+ ++ SL K EE
Sbjct: 912 CQKMEGE--SCEPSVVTYTAMICGYMSLGKVEEA-------------------------- 943
Query: 442 VNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
W+ + ME++G PD ++Y+ I+ L + EDAL EM KG+ P
Sbjct: 944 --WN-------AFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP 992
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 164/397 (41%), Gaps = 43/397 (10%)
Query: 109 IEKALNQCELTLTDDLIVNVINRYRFDWEAAYTFFKWVSREGDYSPGSNVFNAILDVLGR 168
+E L + +++ NV+ R A FF WV ++ +S ++N +L + G
Sbjct: 142 MEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGE 201
Query: 169 ARRFVELIQVFDEMPDLVNEK---TYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSA 225
AR + ++ EM +K T+ IL++ Y A + + + VF++ ++ G
Sbjct: 202 ARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSG------- 254
Query: 226 FQNLLLWLCRYKHVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIK 285
F D NI++ C+ G A F+K++++
Sbjct: 255 ---------------------------FELDATAYNIMIRSLCIAGRGDLALEFYKEMME 287
Query: 286 SKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPE 345
TY ++ + K K+ + M + ++ + C +I E
Sbjct: 288 KGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKE 347
Query: 346 ALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYL 405
ALE++RE+KN+ + + L+K LC+ RM E +D M+++ L + + +
Sbjct: 348 ALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRK---LDDSNVYGII 404
Query: 406 LKSLKKPEEVPWVLERME---RNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGM 462
+ + +V LE+ E ++G TY I++ +K + + EM + G+
Sbjct: 405 ISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGI 464
Query: 463 GPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVP 499
PD + T ++ G + R+ +A F M KG+ P
Sbjct: 465 EPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKP 501
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 19/291 (6%)
Query: 139 AYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEMP---DLVNEKTYGILL 195
A F+K + +G + G + +LD + ++ + + + D+M ++ +G LL
Sbjct: 278 ALEFYKEMMEKG-ITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLL 336
Query: 196 NRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKNEFGY 255
+ + ++EA+ + K D F+ L+ LCR + A + K
Sbjct: 337 KSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD 396
Query: 256 DIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLF 315
D II++G+ +V +A ++ I KS P TY + L K + LF
Sbjct: 397 DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLF 456
Query: 316 QAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKI 375
M E G +PD V ++ + R+ EA +V M+ +G P +Y+ +K LC+
Sbjct: 457 NEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRS 516
Query: 376 KRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWVLERMERNG 426
R + + + ++M + K + + + WV+ ME+NG
Sbjct: 517 SRYDEIIKIFNQM---------------HASKIVIRDDIFSWVISSMEKNG 552
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 125/306 (40%), Gaps = 43/306 (14%)
Query: 236 YKHVEVAETFFE--SEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSV 293
+K +A FF +K+ F + + N +L+ N+ ++ K+ C+ D
Sbjct: 166 FKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIR 225
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREM 353
T+ ++ K K+G L +F+ M + G + D N +I +LC R ALE +EM
Sbjct: 226 TWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEM 285
Query: 354 KNRGCLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSC-LPNEITFNYLLKSLKKP 412
+G + TY L+ + K ++++ V D+M + C + F YLLKS
Sbjct: 286 MEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVR---ICEISEHDAFGYLLKSFCVS 342
Query: 413 EEVPWVLERME------------------RNGCKMS-------------------TDTYN 435
++ LE + + C+ + ++ Y
Sbjct: 343 GKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYG 402
Query: 436 VILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLK 495
+I+ Y+ + K +E ++K G P +YT ++ L+ + E + F+EM
Sbjct: 403 IIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIEN 462
Query: 496 GMVPEP 501
G+ P+
Sbjct: 463 GIEPDS 468
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 43/250 (17%)
Query: 294 TYATFVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKK--RIPEALEVLR 351
T+A + + G A+R F+ M + G P T C+I LC KK + EA R
Sbjct: 715 TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFR 774
Query: 352 EMKNRGCLPN----------------------------------VTTYNSLIKHLCKIKR 377
EM G +P+ Y+ I+ LC+I +
Sbjct: 775 EMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGK 834
Query: 378 METVYEYLDEMEQKNGS-CLPNEITFNYLLKSLKKPEEVPWVLER---MERNGCKMSTDT 433
+E E L E+ G L ++ T+ ++ L + ++ L++ M+ G K
Sbjct: 835 LE---EALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHV 891
Query: 434 YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMR 493
Y ++ + +KV T ++ME + P +YT MI G G++E+A + F M
Sbjct: 892 YTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNME 951
Query: 494 LKGMVPEPRT 503
+G P+ +T
Sbjct: 952 ERGTSPDFKT 961
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 9/323 (2%)
Query: 183 PDLVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVA 242
P +V T G LLN + + +EA+ + D FG + ++ + ++ LC+ + + A
Sbjct: 147 PSIV---TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 243 -ETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNA 301
E F+ EK D T N +++G G +A R +D++K K +P+ + + ++
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 302 LTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPN 361
K+G L A L++ M + P+V T N +I+ C + +A + M ++GC P+
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 362 VTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW---V 418
V TYN+LI CK KR+E + EM + + + T+N L+ + ++ V
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQ--GLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 419 LERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYD 478
RM G TYN++L N +K E+++K M D +Y ++I GL
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 479 KGRLEDALSYFHEMRLKGMVPEP 501
+L++A F + KG+ P+
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDA 464
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 130/303 (42%), Gaps = 6/303 (1%)
Query: 205 EEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFFESEKN-EFGYDIKTMNII 263
++A +F + + + F +L + + ++ + +N +D+ + I+
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 264 LNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTALRLFQAMWEKGR 323
++ +C + A ++K P VT + +N + + A+ L +M G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 324 KPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKRMETVYE 383
P+VV N +I+ LC + + ALEV M+ +G + TYN+LI L R
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 384 YLDEMEQKNGSCLPNEITFNYLLKSLKKPE---EVPWVLERMERNGCKMSTDTYNVILKL 440
L +M ++ PN I F L+ + K E + + M R + TYN ++
Sbjct: 241 LLRDMVKRKID--PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 441 YVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEMRLKGMVPE 500
+ C ++ ++ M KG PD +Y +I G R+ED + F EM +G+V +
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 501 PRT 503
T
Sbjct: 359 AFT 361
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 6/242 (2%)
Query: 137 EAAYTFFKWVSREGDYSPGSNVFNAILDVLGRARRFVELIQVFDEM---PDLVNEKTYGI 193
+AA V R+ D P F A++D + +E ++ EM + N TY
Sbjct: 237 DAARLLRDMVKRKID--PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 194 LLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYKHVEVAETFF-ESEKNE 252
L+N + + +A +FD G D+ + L+ C+ K VE F E
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 253 FGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYATFVNALTKKGKLGTAL 312
D T N +++G+C G + A++ + ++ PD VTY ++ L GK+ AL
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 313 RLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHL 372
+ + + + D++T N II LC ++ EA + R + +G P+ Y ++I L
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Query: 373 CK 374
C+
Sbjct: 475 CR 476
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 11/225 (4%)
Query: 318 MWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYNSLIKHLCKIKR 377
M + G +P +VT +++ C R EA+ ++ M G +PNV YN++I LCK +
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 378 METVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPWV-LERMERNGCKMSTDT--- 433
+ E ME+K + +T+N L+ L W R+ R+ K D
Sbjct: 200 LNNALEVFYCMEKK--GIRADAVTYNTLISGLSNSGR--WTDAARLLRDMVKRKIDPNVI 255
Query: 434 -YNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRLEDALSYFHEM 492
+ ++ +V + R+ ++EM ++ + P+ +Y +I+G G L DA F M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 493 RLKGMVPEPRTGILVNDMNIKLKERGEQGKKVI-KLTSLGLKGNA 536
KG P+ T + K K R E G K+ ++T GL G+A
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTYQGLVGDA 359
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 7/197 (3%)
Query: 307 KLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRGCLPNVTTYN 366
K A LF M + P +V ++ + + + + +M+N G ++ ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 367 SLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSL---KKPEEVPWVLERME 423
LI C+ R+ L +M + P+ +T LL + +E +++ M+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFR--PSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 424 RNGCKMSTDTYNVILK-LYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLYDKGRL 482
G + YN ++ L N D + + + MEKKG+ D +Y +I GL + GR
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNAL-EVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 483 EDALSYFHEMRLKGMVP 499
DA +M + + P
Sbjct: 236 TDAARLLRDMVKRKIDP 252
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,465,445
Number of Sequences: 539616
Number of extensions: 8596058
Number of successful extensions: 29589
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 22130
Number of HSP's gapped (non-prelim): 2724
length of query: 536
length of database: 191,569,459
effective HSP length: 122
effective length of query: 414
effective length of database: 125,736,307
effective search space: 52054831098
effective search space used: 52054831098
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)