BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048750
(344 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6Z358|C3H49_ORYSJ Zinc finger CCCH domain-containing protein 49 OS=Oryza sativa
subsp. japonica GN=Os07g0281000 PE=2 SV=1
Length = 486
Score = 577 bits (1488), Expect = e-164, Method: Compositional matrix adjust.
Identities = 279/346 (80%), Positives = 305/346 (88%), Gaps = 8/346 (2%)
Query: 4 KADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVR 63
+A+YDKECKIC RPFTVFRWRPGRDAR+KKTEICQTC KLKNVCQVCLLDLEYGLPVQVR
Sbjct: 37 RAEYDKECKICARPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVR 96
Query: 64 DTALSINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKARPSDTILKLQRTQPYYK 123
DTALS NSNDAIP+SDVNREYFAEEHDRRARAGIDY+SS GKAR +DTILKLQRT PYYK
Sbjct: 97 DTALSTNSNDAIPRSDVNREYFAEEHDRRARAGIDYDSSNGKARANDTILKLQRTAPYYK 156
Query: 124 RNRAHVCSFYVRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKLLNKAGEM 183
RNRAHVCSFYVRGECTRGAECPYRHEMP TGELSQQNIKDRYYGVNDPVALKLL+KAGEM
Sbjct: 157 RNRAHVCSFYVRGECTRGAECPYRHEMPETGELSQQNIKDRYYGVNDPVALKLLSKAGEM 216
Query: 184 PSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGA 243
PSL PP+DESI+TLY+GG+D+R+TEQDLRD FYAHGEIE+I+M Q+A AFVTYTTREGA
Sbjct: 217 PSLTPPDDESIRTLYIGGLDSRVTEQDLRDQFYAHGEIETIRMVLQRACAFVTYTTREGA 276
Query: 244 EKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSLISQQQ- 302
EKAAEEL+NKLVIKG+RLKLMWGKPQ +PE DE +Q +AH GMLPR++ISQQQ
Sbjct: 277 EKAAEELANKLVIKGVRLKLMWGKPQAPKPE---EDEAGRQGHVAHGGMLPRAVISQQQS 333
Query: 303 -NQYQQPGAQDQAAPTP---YFNIPPPPQQDRAYYPSMDPQRMGAL 344
+Q Q PG + Q P YFNIP PP +R YPSMDPQRMGAL
Sbjct: 334 GDQPQPPGMEGQQQPASASYYFNIPAPPAAERTLYPSMDPQRMGAL 379
>sp|Q5SNN4|C3H40_ORYSJ Zinc finger CCCH domain-containing protein 40 OS=Oryza sativa
subsp. japonica GN=Os06g0170500 PE=2 SV=1
Length = 482
Score = 577 bits (1488), Expect = e-164, Method: Compositional matrix adjust.
Identities = 281/346 (81%), Positives = 308/346 (89%), Gaps = 8/346 (2%)
Query: 4 KADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVR 63
+A+YDKECKIC RPFTVFRWRPGRDAR+KKTEICQTC KLKNVCQVCLLDLEYGLPVQVR
Sbjct: 37 RAEYDKECKICARPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVR 96
Query: 64 DTALSINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKARPSDTILKLQRTQPYYK 123
DTAL+INSNDAIP+SDVNREYFAEEHDR+ARAGIDY+SS+GKARP+DTILKLQRT PYYK
Sbjct: 97 DTALAINSNDAIPRSDVNREYFAEEHDRKARAGIDYDSSHGKARPNDTILKLQRTAPYYK 156
Query: 124 RNRAHVCSFYVRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKLLNKAGEM 183
RNRAHVCSFYVRGECTRGAECPYRHEMP TGELSQQNIKDRYYGVNDPVALKLL KAGEM
Sbjct: 157 RNRAHVCSFYVRGECTRGAECPYRHEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEM 216
Query: 184 PSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGA 243
PSL PP+DESI+TLY+GG++ RITEQDLRD FYAHGEIESI+M Q+A AFVTYTTREGA
Sbjct: 217 PSLTPPDDESIRTLYIGGLNNRITEQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGA 276
Query: 244 EKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSLISQQQ- 302
EKAAEEL+NKLVIKG+RLKLMWGKPQ +PE DE +Q +AH GMLPR++ISQQQ
Sbjct: 277 EKAAEELANKLVIKGIRLKLMWGKPQAPKPE---DDEAGRQGHVAHGGMLPRAVISQQQS 333
Query: 303 -NQYQQPGAQ-DQAAPTP--YFNIPPPPQQDRAYYPSMDPQRMGAL 344
+Q Q PG + Q AP+ YFNIP PP +R YPSMDPQRMGAL
Sbjct: 334 GDQPQPPGMEGQQQAPSGSYYFNIPAPPGAERTLYPSMDPQRMGAL 379
>sp|Q9LNV5|C3H4_ARATH Zinc finger CCCH domain-containing protein 4 OS=Arabidopsis
thaliana GN=At1g07360 PE=2 SV=1
Length = 481
Score = 546 bits (1408), Expect = e-155, Method: Compositional matrix adjust.
Identities = 260/342 (76%), Positives = 295/342 (86%), Gaps = 14/342 (4%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
TKA+YDKECKICTRPFTVFRWRPGRDAR+KKTEICQTC KLKNVCQVCLLDLEYGLPVQV
Sbjct: 36 TKANYDKECKICTRPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQV 95
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKARPSDTILKLQRTQPYY 122
RDTAL+I+++D+IPKSDVNREYFAEEHDR+ARAG+DYESS+GK RP+DTILKLQRT PYY
Sbjct: 96 RDTALNISTHDSIPKSDVNREYFAEEHDRKARAGLDYESSFGKMRPNDTILKLQRTTPYY 155
Query: 123 KRNRAHVCSFYVRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKLLNKAGE 182
KRNRAHVCSF++RGECTRGAECPYRHEMP TGELSQQNIKDRYYGVNDPVA+KLL KAGE
Sbjct: 156 KRNRAHVCSFFIRGECTRGAECPYRHEMPETGELSQQNIKDRYYGVNDPVAMKLLGKAGE 215
Query: 183 MPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREG 242
M +LE P+DESIKTLYVGG+++RI EQD+RD FYAHGEIESI++ KA AFVTYT+REG
Sbjct: 216 MGTLESPDDESIKTLYVGGLNSRILEQDIRDQFYAHGEIESIRILADKACAFVTYTSREG 275
Query: 243 AEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSLISQQQ 302
AEKAA+ELSN+LVI G RLKL WG+P+ + D QQ +AHSG+LPR++ISQQ
Sbjct: 276 AEKAAQELSNRLVINGQRLKLTWGRPKPDQ------DGANQQGGVAHSGLLPRAVISQQH 329
Query: 303 NQYQQPGAQDQAAPTPYFNIPPPPQQDRAYYPSMDPQRMGAL 344
N QP Q Y+ PPP QD+ YYPSMDPQRMGA+
Sbjct: 330 N---QPPPMQQ-----YYMHPPPANQDKPYYPSMDPQRMGAV 363
>sp|Q9ZW36|C3H25_ARATH Zinc finger CCCH domain-containing protein 25 OS=Arabidopsis
thaliana GN=At2g29580 PE=2 SV=1
Length = 483
Score = 529 bits (1362), Expect = e-149, Method: Compositional matrix adjust.
Identities = 253/355 (71%), Positives = 294/355 (82%), Gaps = 34/355 (9%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
TKA+YDKECKICTRPFTVFRWRPGRDAR+KKTE+CQTC KLKNVCQVCLLDLEYGLPVQV
Sbjct: 36 TKANYDKECKICTRPFTVFRWRPGRDARYKKTEVCQTCCKLKNVCQVCLLDLEYGLPVQV 95
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKARPSDTILKLQRTQPYY 122
RDTAL+I+++D+IPKSDVNRE+FAEEHDR+ RAG+DYESS+GK RP+DTI LQRT PYY
Sbjct: 96 RDTALNISTHDSIPKSDVNREFFAEEHDRKTRAGLDYESSFGKIRPNDTIRMLQRTTPYY 155
Query: 123 KRNRAHVCSFYVRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKLLNKAGE 182
KRNRAH+CSF++RGECTRG ECPYRHEMP TGELSQQNIKDRYYGVNDPVALKLL KAGE
Sbjct: 156 KRNRAHICSFFIRGECTRGDECPYRHEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGE 215
Query: 183 MPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREG 242
M +LE PED+SI+TLYVGG+++R+ EQD+RD FYAHGEIESI++ +KA AFVTYTTREG
Sbjct: 216 MGTLESPEDQSIRTLYVGGLNSRVLEQDIRDQFYAHGEIESIRILAEKACAFVTYTTREG 275
Query: 243 AEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSLISQQQ 302
AEKAAEELSN+LV+ G RLKL WG+PQ +P+ + S+ QQ ++AHSG+LPR++ISQQQ
Sbjct: 276 AEKAAEELSNRLVVNGQRLKLTWGRPQVPKPDQDGSN---QQGSVAHSGLLPRAVISQQQ 332
Query: 303 NQYQQPGAQDQAAPTPYFNIPPPPQQ-------------DRAYYPSMDPQRMGAL 344
NQ PPP Q DR +YPSMDPQRMGA+
Sbjct: 333 NQ------------------PPPMLQYYMHPPPPQPPHQDRPFYPSMDPQRMGAV 369
>sp|Q9FL40|C3H53_ARATH Zinc finger CCCH domain-containing protein 53 OS=Arabidopsis
thaliana GN=At5g07060 PE=2 SV=1
Length = 363
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/343 (57%), Positives = 238/343 (69%), Gaps = 59/343 (17%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
T+ADYDKECKIC+RPFT FRWRPGR+ARFKKTEICQTCSKLKNVCQVCLLDL +GLPVQV
Sbjct: 33 TRADYDKECKICSRPFTAFRWRPGRNARFKKTEICQTCSKLKNVCQVCLLDLGFGLPVQV 92
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKARPSDTILKLQRTQPYY 122
RD+AL+INS+ ++P S VNREYFA+EHD + RAG+DYESS+GK +P+DTILKLQR P Y
Sbjct: 93 RDSALNINSHYSVPMSHVNREYFADEHDPKTRAGLDYESSFGKMQPNDTILKLQRRTPSY 152
Query: 123 KRNRAHVCSFYVRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKLLNKAGE 182
++NR +CSFY G+C RGAEC +RHEMP TGELS QNI+DRYY VNDPVA+KLL KAGE
Sbjct: 153 EKNRPKICSFYTIGQCKRGAECSFRHEMPETGELSHQNIRDRYYSVNDPVAMKLLRKAGE 212
Query: 183 MPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREG 242
M +LEPPEDESIKTLYVGG+++RI EQD+ D+FYA+GE+ESI++
Sbjct: 213 MGTLEPPEDESIKTLYVGGLNSRIFEQDIHDHFYAYGEMESIRV---------------- 256
Query: 243 AEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSLISQQQ 302
AE+ GK +QQ +IAH+G++ + Q
Sbjct: 257 ---MAED----------------GKYDQS------GSNQQQQGSIAHTGLISQQQNQHSQ 291
Query: 303 NQ--YQQPGAQDQAAPTPYFNIPPPPQQDRAYYPSMDPQRMGA 343
Q Y QP PPP + ++YPSMD QRMGA
Sbjct: 292 MQQYYMQP---------------PPPNE-YSHYPSMDTQRMGA 318
>sp|Q6NZZ9|RBM22_DANRE Pre-mRNA-splicing factor RBM22 OS=Danio rerio GN=rbm22 PE=2 SV=1
Length = 425
Score = 334 bits (857), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 180/391 (46%), Positives = 229/391 (58%), Gaps = 60/391 (15%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
TK + KECKIC RPFTVFRW PG RFKKTE+CQTCSK+KNVCQ CLLDLEYGLP+QV
Sbjct: 37 TKEKFGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQV 96
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRA--RAGIDYESSYGKA-RPSDTILKLQRTQ 119
RDT LS+ D +P+SDVN+EY+ + +R G GKA SD +LKL RT
Sbjct: 97 RDTGLSVK--DEVPRSDVNKEYYTQNMEREIANSDGTRPVGLLGKAPSSSDMLLKLARTT 154
Query: 120 PYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLL 177
PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ QNIKDRYYG+NDPVA KLL
Sbjct: 155 PYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVANKLL 214
Query: 178 NKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTY 237
+A MP L+ P+D+SI TLY+GG+ +T+ +LR++FY GEI +I + ++ AF+ +
Sbjct: 215 MRASTMPRLDVPDDKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQF 274
Query: 238 TTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSL 297
TR+ AE AAE+ NKL+I G RL + WG+ Q R +GE + + SG+
Sbjct: 275 ATRQAAETAAEKSFNKLIINGRRLNVKWGRSQAARGKGE-------KDGVTESGIRLEP- 326
Query: 298 ISQQQNQYQQPGAQDQAAPTPYFNIPPPPQQ----------------------------- 328
+ P D+ A T YFN+ P P
Sbjct: 327 VPGLPGALPPPPVSDEDASTNYFNLAPTPSPAVMNLGLPPPPGVTMPPPPGFGPPMFHTM 386
Query: 329 ----------------DRAYYPSMDPQRMGA 343
+ +YPS DPQRMGA
Sbjct: 387 DPMAPPVPPPMALRPPGQVHYPSQDPQRMGA 417
>sp|Q5RAY5|RBM22_PONAB Pre-mRNA-splicing factor RBM22 OS=Pongo abelii GN=RBM22 PE=2 SV=1
Length = 420
Score = 333 bits (855), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 188/385 (48%), Positives = 231/385 (60%), Gaps = 53/385 (13%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
TK Y KECKIC RPFTVFRW PG RFKKTE+CQTCSKLKNVCQ CLLDLEYGLP+QV
Sbjct: 37 TKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQV 96
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRARA--GIDYESSYGKA-RPSDTILKLQRTQ 119
RD LS D +PKSDVN+EY+ + +R G GKA SD +LKL RT
Sbjct: 97 RDAGLSFK--DDMPKSDVNKEYYTQNMEREISNSDGTRPVGMLGKATSTSDMLLKLARTT 154
Query: 120 PYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLL 177
PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ QNIKDRYYG+NDPVA KLL
Sbjct: 155 PYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLL 214
Query: 178 NKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTY 237
+A MP L+PPED++I TLYVGG+ ITE DLR++FY GEI +I + ++ AF+ +
Sbjct: 215 KRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQF 274
Query: 238 TTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSL 297
TR+ AE AAE+ NKL++ G RL + WG+ Q R + + D SG+ +
Sbjct: 275 ATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKD------GTTDSGIKLEPV 328
Query: 298 ISQQQNQYQQPGAQDQAAPTPYFNIPP--------------------------------- 324
P A+++A+ YFN+PP
Sbjct: 329 PGLPGALPPPPAAEEEASAN-YFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPM 387
Query: 325 --PPQQDRA----YYPSMDPQRMGA 343
PP RA +YPS DPQRMGA
Sbjct: 388 GPPPPFMRAPGPIHYPSQDPQRMGA 412
>sp|Q8BHS3|RBM22_MOUSE Pre-mRNA-splicing factor RBM22 OS=Mus musculus GN=Rbm22 PE=2 SV=1
Length = 420
Score = 333 bits (854), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 188/385 (48%), Positives = 231/385 (60%), Gaps = 53/385 (13%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
TK Y KECKIC RPFTVFRW PG RFKKTE+CQTCSKLKNVCQ CLLDLEYGLP+QV
Sbjct: 37 TKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQV 96
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRARA--GIDYESSYGKA-RPSDTILKLQRTQ 119
RD LS D +PKSDVN+EY+ + +R G GKA SD +LKL RT
Sbjct: 97 RDAGLSFK--DDMPKSDVNKEYYTQNMEREISNSDGTRPVGMLGKATSTSDMLLKLARTT 154
Query: 120 PYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLL 177
PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ QNIKDRYYG+NDPVA KLL
Sbjct: 155 PYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLL 214
Query: 178 NKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTY 237
+A MP L+PPED++I TLYVGG+ ITE DLR++FY GEI +I + ++ AF+ +
Sbjct: 215 KRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQF 274
Query: 238 TTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSL 297
TR+ AE AAE+ NKL++ G RL + WG+ Q R + + D SG+ +
Sbjct: 275 ATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKD------GTTDSGIKLEPV 328
Query: 298 ISQQQNQYQQPGAQDQAAPTPYFNIPP--------------------------------- 324
P A+++A+ YFN+PP
Sbjct: 329 PGLPGALPPPPAAEEEASAN-YFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPM 387
Query: 325 --PPQQDRA----YYPSMDPQRMGA 343
PP RA +YPS DPQRMGA
Sbjct: 388 GPPPPFMRAPGPIHYPSQDPQRMGA 412
>sp|Q4R4J1|RBM22_MACFA Pre-mRNA-splicing factor RBM22 OS=Macaca fascicularis GN=RBM22 PE=2
SV=1
Length = 420
Score = 333 bits (854), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 188/385 (48%), Positives = 231/385 (60%), Gaps = 53/385 (13%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
TK Y KECKIC RPFTVFRW PG RFKKTE+CQTCSKLKNVCQ CLLDLEYGLP+QV
Sbjct: 37 TKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQV 96
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRARA--GIDYESSYGKA-RPSDTILKLQRTQ 119
RD LS D +PKSDVN+EY+ + +R G GKA SD +LKL RT
Sbjct: 97 RDAGLSFK--DDMPKSDVNKEYYTQNMEREISNSDGTRPVGMLGKATSTSDMLLKLARTT 154
Query: 120 PYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLL 177
PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ QNIKDRYYG+NDPVA KLL
Sbjct: 155 PYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLL 214
Query: 178 NKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTY 237
+A MP L+PPED++I TLYVGG+ ITE DLR++FY GEI +I + ++ AF+ +
Sbjct: 215 KRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQF 274
Query: 238 TTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSL 297
TR+ AE AAE+ NKL++ G RL + WG+ Q R + + D SG+ +
Sbjct: 275 ATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKD------GTTDSGIKLEPV 328
Query: 298 ISQQQNQYQQPGAQDQAAPTPYFNIPP--------------------------------- 324
P A+++A+ YFN+PP
Sbjct: 329 PGLPGALPPPPAAEEEASAN-YFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPM 387
Query: 325 --PPQQDRA----YYPSMDPQRMGA 343
PP RA +YPS DPQRMGA
Sbjct: 388 GPPPPFMRAPGPIHYPSQDPQRMGA 412
>sp|Q9NW64|RBM22_HUMAN Pre-mRNA-splicing factor RBM22 OS=Homo sapiens GN=RBM22 PE=1 SV=1
Length = 420
Score = 333 bits (854), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 188/385 (48%), Positives = 231/385 (60%), Gaps = 53/385 (13%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
TK Y KECKIC RPFTVFRW PG RFKKTE+CQTCSKLKNVCQ CLLDLEYGLP+QV
Sbjct: 37 TKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQV 96
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRARA--GIDYESSYGKA-RPSDTILKLQRTQ 119
RD LS D +PKSDVN+EY+ + +R G GKA SD +LKL RT
Sbjct: 97 RDAGLSFK--DDMPKSDVNKEYYTQNMEREISNSDGTRPVGMLGKATSTSDMLLKLARTT 154
Query: 120 PYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLL 177
PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ QNIKDRYYG+NDPVA KLL
Sbjct: 155 PYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLL 214
Query: 178 NKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTY 237
+A MP L+PPED++I TLYVGG+ ITE DLR++FY GEI +I + ++ AF+ +
Sbjct: 215 KRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQF 274
Query: 238 TTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSL 297
TR+ AE AAE+ NKL++ G RL + WG+ Q R + + D SG+ +
Sbjct: 275 ATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKD------GTTDSGIKLEPV 328
Query: 298 ISQQQNQYQQPGAQDQAAPTPYFNIPP--------------------------------- 324
P A+++A+ YFN+PP
Sbjct: 329 PGLPGALPPPPAAEEEASAN-YFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPM 387
Query: 325 --PPQQDRA----YYPSMDPQRMGA 343
PP RA +YPS DPQRMGA
Sbjct: 388 GPPPPFMRAPGPIHYPSQDPQRMGA 412
>sp|Q4V7D7|RBM22_RAT Pre-mRNA-splicing factor RBM22 OS=Rattus norvegicus GN=Rbm22 PE=2
SV=1
Length = 420
Score = 333 bits (853), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/385 (48%), Positives = 231/385 (60%), Gaps = 53/385 (13%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
TK Y KECKIC RPFTVFRW PG RFKKTE+CQTCSKLKNVCQ CLLDLEYGLP+QV
Sbjct: 37 TKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQV 96
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRARA--GIDYESSYGKA-RPSDTILKLQRTQ 119
RD LS D +PKSDVN+EY+ + +R G GKA SD +LKL RT
Sbjct: 97 RDAGLSFK--DDMPKSDVNKEYYTQNMEREISNSDGTRPVGMLGKATSTSDMLLKLARTT 154
Query: 120 PYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLL 177
PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ QNIKDRYYG+NDPVA KLL
Sbjct: 155 PYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLL 214
Query: 178 NKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTY 237
+A MP L+PPED++I TLYVGG+ ITE DLR++FY GEI ++ + ++ AF+ +
Sbjct: 215 KRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTVTVVQRQQCAFIQF 274
Query: 238 TTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSL 297
TR+ AE AAE+ NKL++ G RL + WG+ Q R + + D SG+ +
Sbjct: 275 ATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKD------GTTDSGIKLEPV 328
Query: 298 ISQQQNQYQQPGAQDQAAPTPYFNIPP--------------------------------- 324
P A+++A+ YFN+PP
Sbjct: 329 PGLPGALPPPPAAEEEASAN-YFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHLFHPM 387
Query: 325 --PPQQDRA----YYPSMDPQRMGA 343
PP RA +YPS DPQRMGA
Sbjct: 388 GPPPPFMRAPGPIHYPSQDPQRMGA 412
>sp|Q5ZM16|RBM22_CHICK Pre-mRNA-splicing factor RBM22 OS=Gallus gallus GN=RBM22 PE=2 SV=1
Length = 420
Score = 332 bits (852), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/385 (48%), Positives = 234/385 (60%), Gaps = 53/385 (13%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
TK Y KECKIC RPFTVFRW PG RFKKTE+CQTCSKLKNVCQ CLLDLEYGLP+QV
Sbjct: 37 TKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQV 96
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRA--RAGIDYESSYGKA-RPSDTILKLQRTQ 119
RD LS+ D +PKSDVN+EY+ + +R G + GKA SD +LKL RT
Sbjct: 97 RDAGLSLK--DEMPKSDVNKEYYTQNMEREIANSDGTRPVGALGKATSTSDMLLKLARTT 154
Query: 120 PYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLL 177
PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ Q+IKDRYYG+NDPVA KLL
Sbjct: 155 PYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQDIKDRYYGINDPVADKLL 214
Query: 178 NKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTY 237
+A MP L+PP+D++I TLYVGG+ ITE DLR++FY GEI +I + ++ AF+ +
Sbjct: 215 KRASTMPRLDPPDDKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQF 274
Query: 238 TTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSL 297
TR+ AE AAE+ NKL++ G RL + WG+ Q R G+ D + SG+ +
Sbjct: 275 ATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAAR--GKEKD----KEGTTESGIKLEPV 328
Query: 298 ISQQQNQYQQPGAQDQAAPTPYFNIPP--------------------------------- 324
P A+++A+ YFN+PP
Sbjct: 329 PGLPGALPPPPAAEEEASAN-YFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHAM 387
Query: 325 --PPQQDRA----YYPSMDPQRMGA 343
PP RA +YPS DPQRMGA
Sbjct: 388 GPPPPFMRAPGPIHYPSQDPQRMGA 412
>sp|Q7ZXB5|RBM22_XENLA Pre-mRNA-splicing factor RBM22 OS=Xenopus laevis GN=rbm22 PE=2 SV=1
Length = 417
Score = 332 bits (851), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 180/383 (46%), Positives = 227/383 (59%), Gaps = 52/383 (13%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
TK Y KECKIC RPFTVFRW PG RFKKTE+CQTCSKLKNVCQ CLLDLEYGLP+QV
Sbjct: 37 TKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQV 96
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRA--RAGIDYESSYGKA-RPSDTILKLQRTQ 119
RDT +S+ D +P+SDVN+EY+ + +R G + GKA SD +LKL RT
Sbjct: 97 RDTGVSLK--DEMPRSDVNKEYYTQNMEREIANSDGTRPVGALGKATSSSDMLLKLARTT 154
Query: 120 PYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLL 177
PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ QNIKDR+YG+NDPVA KLL
Sbjct: 155 PYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRFYGINDPVADKLL 214
Query: 178 NKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTY 237
+A MP L+PPED+SI TLYVGG+ I+E +LR++FY GEI +I + ++ AF+ +
Sbjct: 215 KRASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQF 274
Query: 238 TTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSL 297
TR+ AE AAE+ NKL++ G RL + WG+ Q R + R+ GM +
Sbjct: 275 ATRQSAETAAEKSFNKLIVNGRRLNVKWGRSQAAR------GKEREHDGSGDPGMKFEPV 328
Query: 298 ISQQQNQYQQPGAQDQAAPTPYFNIPPPPQQ----------------------------- 328
P ++ +A YFN+PP
Sbjct: 329 PGLPGALPPPPTEEESSAN--YFNLPPNGSAALVNISLPPPPGLSGPPPGFGPHMFPPMA 386
Query: 329 --------DRAYYPSMDPQRMGA 343
+YPS DPQRMGA
Sbjct: 387 PPPFLRAPGHIHYPSQDPQRMGA 409
>sp|Q3B7L8|RBM22_BOVIN Pre-mRNA-splicing factor RBM22 OS=Bos taurus GN=RBM22 PE=2 SV=1
Length = 420
Score = 332 bits (851), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 187/385 (48%), Positives = 230/385 (59%), Gaps = 53/385 (13%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
TK Y KECKIC RPFTVFRW PG RFKKTE+CQTCSKLKNVCQ CLLDLEYGLP+QV
Sbjct: 37 TKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQV 96
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRARA--GIDYESSYGKA-RPSDTILKLQRTQ 119
RD LS D +PKSDVN+EY+ + +R G GKA SD +LKL RT
Sbjct: 97 RDAGLSFK--DDMPKSDVNKEYYTQNMEREISNSDGTRPVGMLGKATSTSDMLLKLARTT 154
Query: 120 PYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLL 177
PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ QNIKDRYYG+NDPVA KLL
Sbjct: 155 PYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLL 214
Query: 178 NKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTY 237
+A MP L+PPED++I TLYVGG+ ITE DLR++FY GEI +I + ++ AF+ +
Sbjct: 215 KRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQF 274
Query: 238 TTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSL 297
TR+ AE AAE+ NK ++ G RL + WG+ Q R + + D SG+ +
Sbjct: 275 ATRQAAEVAAEKSFNKFIVNGRRLNVKWGRSQAARGKEKEKD------GTTDSGIKLEPV 328
Query: 298 ISQQQNQYQQPGAQDQAAPTPYFNIPP--------------------------------- 324
P A+++A+ YFN+PP
Sbjct: 329 PGLPGALPPPPAAEEEASAN-YFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPM 387
Query: 325 --PPQQDRA----YYPSMDPQRMGA 343
PP RA +YPS DPQRMGA
Sbjct: 388 GPPPPFMRAPGPIHYPSQDPQRMGA 412
>sp|Q6P616|RBM22_XENTR Pre-mRNA-splicing factor RBM22 OS=Xenopus tropicalis GN=rbm22 PE=2
SV=1
Length = 417
Score = 330 bits (847), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 180/383 (46%), Positives = 227/383 (59%), Gaps = 52/383 (13%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
TK Y KECKIC RPFTVFRW PG RFKKTE+CQTCSKLKNVCQ CLLDLEYGLP+QV
Sbjct: 37 TKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQV 96
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRA--RAGIDYESSYGKA-RPSDTILKLQRTQ 119
RD S+ D +P+SDVN+EY+ + +R G + GKA SD +LKL RT
Sbjct: 97 RDAGASLK--DEMPRSDVNKEYYTQNMEREIANSDGTRPVGALGKATSSSDMLLKLARTT 154
Query: 120 PYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLL 177
PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ QNIKDRYYG+NDPVA KLL
Sbjct: 155 PYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLL 214
Query: 178 NKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTY 237
+A MP L+PPED+SI TLYVGG+ I+E +LR++FY GEI +I + ++ AF+ +
Sbjct: 215 KRASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQF 274
Query: 238 TTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSL 297
TR+ AE AAE+ NKL++ G RL + WG+ Q R + R++ + GM +
Sbjct: 275 ATRQAAEMAAEKSFNKLIVNGRRLNVKWGRSQAAR------GKERERDGSSDPGMKLEPV 328
Query: 298 ISQQQNQYQQPGAQDQAAPTPYFNIPPPPQQ----------------------------- 328
P ++ +A YFN+PP
Sbjct: 329 PGLPGALPPPPTEEESSA--NYFNLPPNGSAALVNISLPPPPGLSGPPPGYGPHMFPPMA 386
Query: 329 --------DRAYYPSMDPQRMGA 343
+YPS DPQRMGA
Sbjct: 387 PPPFLRAPGHIHYPSQDPQRMGA 409
>sp|P0CR50|SLT11_CRYNJ Pre-mRNA-splicing factor SLT11 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SLT11 PE=3 SV=1
Length = 326
Score = 231 bits (589), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 125/284 (44%), Positives = 179/284 (63%), Gaps = 18/284 (6%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
K ++ ECK+C RPFTVFRW PG + R KKTEIC TC+K+K VCQ CLLDLE+GLP QV
Sbjct: 34 NKQEFGHECKVCNRPFTVFRWNPG-EGRMKKTEICTTCAKIKGVCQTCLLDLEFGLPTQV 92
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRARA---GIDYESSYGKARPSDTILKLQRTQ 119
RD AL+ + P SD+N++Y+ + + + G+ Y+S + + L RT
Sbjct: 93 RDAALARKAQ--APSSDINKQYYIQNLEAQMAESPDGLAYDSEVANRAGREMLKNLARTD 150
Query: 120 PYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGEL---SQQNIKDRYYGVNDPVALKL 176
PYYKRNR H+CSF+V+GEC RGAECP+RHEMP E SQQ++ DRYYG NDPVA K+
Sbjct: 151 PYYKRNRPHICSFFVKGECKRGAECPFRHEMPKENETQKPSQQSLVDRYYGRNDPVAKKI 210
Query: 177 LNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDN------FYAHGEIESIKMHPQK 230
L++ E L+ PED+SI TL G+ + + +R + F +++SI +
Sbjct: 211 LSQNAESKGLKAPEDKSITTLLFLGL-PQCNDSHVRASLVGACPFVKPSDVKSISIVEAS 269
Query: 231 AFAFVTYTTREGAEKAAEELSNK--LVIKGLRLKLMWGKPQTQR 272
AFV + R AE+AA+ L+ + + ++G + K++WG+ + Q+
Sbjct: 270 HCAFVNFNQRSMAERAADALAAQGGIEVEGKKAKIVWGRARPQK 313
>sp|P0CR51|SLT11_CRYNB Pre-mRNA-splicing factor SLT11 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SLT11 PE=3
SV=1
Length = 326
Score = 231 bits (589), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 125/284 (44%), Positives = 179/284 (63%), Gaps = 18/284 (6%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
K ++ ECK+C RPFTVFRW PG + R KKTEIC TC+K+K VCQ CLLDLE+GLP QV
Sbjct: 34 NKQEFGHECKVCNRPFTVFRWNPG-EGRMKKTEICTTCAKIKGVCQTCLLDLEFGLPTQV 92
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRARA---GIDYESSYGKARPSDTILKLQRTQ 119
RD AL+ + P SD+N++Y+ + + + G+ Y+S + + L RT
Sbjct: 93 RDAALARKAQ--APSSDINKQYYIQNLEAQMAESPDGLAYDSEVANRAGREMLKNLARTD 150
Query: 120 PYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGEL---SQQNIKDRYYGVNDPVALKL 176
PYYKRNR H+CSF+V+GEC RGAECP+RHEMP E SQQ++ DRYYG NDPVA K+
Sbjct: 151 PYYKRNRPHICSFFVKGECKRGAECPFRHEMPKENETQKPSQQSLVDRYYGRNDPVAKKI 210
Query: 177 LNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDN------FYAHGEIESIKMHPQK 230
L++ E L+ PED+SI TL G+ + + +R + F +++SI +
Sbjct: 211 LSQNAESKGLKAPEDKSITTLLFLGL-PQCNDSHVRASLVGACPFVKPSDVKSISIVEAS 269
Query: 231 AFAFVTYTTREGAEKAAEELSNK--LVIKGLRLKLMWGKPQTQR 272
AFV + R AE+AA+ L+ + + ++G + K++WG+ + Q+
Sbjct: 270 HCAFVNFNQRSMAERAADALAAQGGIEVEGKKAKIVWGRARPQK 313
>sp|Q8I4V2|RBM22_PLAF7 Pre-mRNA-splicing factor PFL2310w OS=Plasmodium falciparum (isolate
3D7) GN=PFL2310w PE=3 SV=1
Length = 357
Score = 204 bits (519), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 164/258 (63%), Gaps = 15/258 (5%)
Query: 9 KECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALS 68
KECKIC FT FRW+PG ++R+K+T IC C+K+KNVCQ CL DL+Y LPVQVRD L
Sbjct: 45 KECKICKNVFTHFRWKPGENSRYKQTVICMKCAKVKNVCQTCLFDLQYNLPVQVRDKFLE 104
Query: 69 INSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKA-RPSDTILKLQRTQPYYKRNRA 127
++ +P+++ NR +F E+ + D S+Y K R + + KL+R PY+KRN A
Sbjct: 105 --NSIVLPENETNRNFFLEQMEN------DMSSTYDKMNRINMDLSKLKRRDPYFKRNMA 156
Query: 128 HVCSFYVRGECTRGAECPYRH-EMPVTGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSL 186
VCSF+ + C RG ECPY H E+ + LS QNIK+RY G ND +A K+L K E +
Sbjct: 157 RVCSFWRKNSCNRGDECPYLHKEIHLDKSLSNQNIKNRYTGENDILAEKILLKHNEKNN- 215
Query: 187 EPPEDESIKT-LYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEK 245
+D+++ + + G+ +++ ++++ F G+I+SIK+ P+ + F++Y+ + A+K
Sbjct: 216 ---DDKNMSNKICIQGISESVSQANIKECFKKFGDIKSIKVIPKDSKMFISYSNSQAAKK 272
Query: 246 AAEELSNKLVIKGLRLKL 263
A+++ + L++ G L +
Sbjct: 273 ASDKYKDGLLLNGCNLTV 290
>sp|Q4PGU6|SLT11_USTMA Pre-mRNA-splicing factor SLT11 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=SLT11 PE=3 SV=1
Length = 324
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 153/284 (53%), Gaps = 23/284 (8%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
TK K CK+CTRPFTVFRW PG +RFKKTEIC TC+K+KNVCQ C+LDL+YGLPVQV
Sbjct: 27 TKDPRGKSCKVCTRPFTVFRWNPGAGSRFKKTEICATCAKVKNVCQTCILDLQYGLPVQV 86
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKARPSDTILKLQRTQPYY 122
RD AL I S+ SD + YFA+ +++ A + S G+ + + K R + Y
Sbjct: 87 RDAALGIKSDAGPTSSDKAKAYFADTMEKQLEATVGSSSRAGQ----ELVRKAARREIDY 142
Query: 123 KRNRA----HVCSFYVRGECTRGAECPYRHEMPVTGELS----QQNIKDRYYGVNDP--- 171
KR+R +CS + RG C RG CP++H++P +L NI Y +
Sbjct: 143 KRDRPVQSQKLCSAFARGRCERGDSCPFKHQLPTDDQLPGLQPSSNINYPYSPTSSSPSK 202
Query: 172 -VALKLLNKAGEMPSLEPPEDESIKTLYVGGVD-ARITEQDLRDNFYAHG------EIES 223
K+L + L PP D S+++L++ + + E +R F +I+S
Sbjct: 203 QAVAKILTSSTSSVGLPPPSDASVRSLFISNLPPEHLEEPSIRQFFLDLAPPLQAQDIKS 262
Query: 224 IKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGK 267
I + AFV + TR+ AE AA K+ + ++LMWG+
Sbjct: 263 ITLVRASNCAFVNFATRDHAELAARRCEPKMRLGDKEIRLMWGR 306
>sp|Q4W9V0|SLT11_ASPFU Pre-mRNA-splicing factor slt11 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=slt11
PE=3 SV=1
Length = 383
Score = 172 bits (435), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 149/297 (50%), Gaps = 49/297 (16%)
Query: 4 KADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVR 63
K DY ECKICTRPFT+FRW+ R AR K+T IC TC++LKN CQ C+LDL +GLP+ VR
Sbjct: 38 KEDYGAECKICTRPFTIFRWKADRTARTKRTTICLTCARLKNCCQCCMLDLSFGLPIVVR 97
Query: 64 DTALSINSNDAIPKSDVNREYFAEEHDRRARAGID----YESSYGKARPSDTILKLQRTQ 119
D AL + + P+S +NREY+A+EH++ + G YE + KAR + + +L ++
Sbjct: 98 DAALKMVAPG--PESSINREYYAQEHEKEIQEGRGAVEAYEKTDEKAR--ELLRRLANSE 153
Query: 120 PYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKLLNK 179
PYY++ R + G P + ++ RY P+ +
Sbjct: 154 PYYRKPRQQL----------EGPSDDSTEAQPTDAPV----VQSRYGNGPGPIRTSESRR 199
Query: 180 AGEMPSLE---------------------------PPEDESIKTLYVGGVDARITEQDLR 212
+P PP D +I +L+V GV+ + E LR
Sbjct: 200 GTPLPGRGRGNMRGGRAGRPFPGTAQIPPSPEDYLPPADPNIMSLFVTGVEDDLPEHTLR 259
Query: 213 DNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQ 269
F G++ S+ + AF+ + TREGAE AA+ K VI+G L++ WGKP+
Sbjct: 260 TFFTQFGQLRSLICSHRAHCAFINFATREGAEAAAQHCKGKAVIQGCPLRVRWGKPK 316
>sp|Q7RUX3|SLT11_NEUCR Pre-mRNA-splicing factor slt-11 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=slt-11 PE=3 SV=2
Length = 385
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 170/354 (48%), Gaps = 29/354 (8%)
Query: 4 KADYDKECKICTRPFTVFRWRPGR-DARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
K DY ECK+CTRPFTVF W R AR K+T IC TC++LKN CQ C+LDL++GLP+ +
Sbjct: 37 KEDYGAECKLCTRPFTVFSWAADRAHARKKRTNICLTCARLKNACQCCILDLQFGLPIII 96
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDR---RARAGID-YESSYGKARPSDTILKLQRT 118
RD AL + + P+S++NREYFA+ ++R RAG++ YE + KAR + + +L ++
Sbjct: 97 RDKALELVAPG--PQSEINREYFAQNNERAIEEGRAGVEEYEKADEKAR--ELLRRLAQS 152
Query: 119 QPYYKRNRAHV--------CSFYVRGECTRG---AECPYRHEMPVTGELSQQNIKDRYYG 167
+P Y R V S G T G P+ S+
Sbjct: 153 KP-YFRKGREVDEEGNPVNGSSSGAGRATGGNPAVGAGVGGVGPIRTRDSRAAAAAGARP 211
Query: 168 VNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMH 227
PP D+SI +L+V G++ + E +RD F A G+I+S+ +
Sbjct: 212 GGGRRPNAAPAPPPGPKDWLPPADKSIMSLFVTGIEDDLPEFKIRDFFKAFGKIKSLVVS 271
Query: 228 PQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQ---TQRPEGESSDEVRQQ 284
AFV Y TRE AEKA+ E + VI G L++ W P+ T E + S+ +R
Sbjct: 272 HMSHAAFVNYETREAAEKASAECKGRAVIAGCPLRVRWSVPKALGTMNKE-QRSEMLRDG 330
Query: 285 AAIAHSGMLP--RSLISQQQNQYQQPGAQDQAAPTPYFNIPPPPQQDRAYYPSM 336
+ SG + I Q Q GAQ A I PP Y S+
Sbjct: 331 RSAFGSGQKTGGQKAIGGQNAQGGASGAQKDDASN--LTIAAPPGAADVQYASL 382
>sp|Q5AX35|SLT11_EMENI Pre-mRNA-splicing factor slt11 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=slt11
PE=3 SV=2
Length = 377
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 147/294 (50%), Gaps = 47/294 (15%)
Query: 4 KADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVR 63
K DY ECKICTRPFT+FRW+ R AR K+T IC TC++LKN CQ C+LDL +GLP+ VR
Sbjct: 37 KEDYGAECKICTRPFTIFRWKADRTARTKRTNICLTCARLKNCCQCCMLDLSFGLPIVVR 96
Query: 64 DTALSINSNDAIPKSDVNREYFAEEHDRRARAGI----DYESSYGKARPSDTILKLQRTQ 119
D AL + + P+S +NREY+A+ H++ G +YE + KAR + + +L ++
Sbjct: 97 DAALKMVAPG--PQSSINREYYAQGHEKEIEEGRGAVEEYEKTDEKAR--ELLRRLANSE 152
Query: 120 PYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKLLNK 179
PYY++ R E P + G ++ RY PV +
Sbjct: 153 PYYRKPRQ--------------LEAP-EEDGETQGPSDATVVRSRYGNGPGPVRTSESRR 197
Query: 180 AGEMPS------------------------LEPPEDESIKTLYVGGVDARITEQDLRDNF 215
+P + PP D +I +L+V GV+ + E LR F
Sbjct: 198 GTPLPGRGRGGVRGGRPFPGTAQLPPSQADILPPADPNITSLFVTGVEDDLPEHALRSFF 257
Query: 216 YAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQ 269
G++ S+ + AF+ Y RE AE AA+ K V++G L++ WGKP+
Sbjct: 258 VQFGQLRSLVCSHRAHCAFINYAARESAEAAAKHCQGKAVVQGCPLRVRWGKPK 311
>sp|O59800|SLT11_SCHPO Pre-mRNA-splicing factor cwf5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf5 PE=1 SV=1
Length = 354
Score = 142 bits (357), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 170/334 (50%), Gaps = 28/334 (8%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
TK +ECKIC++P T+FRW R + KT+IC C++ KN CQ C+LDL++GLP+ +
Sbjct: 36 TKEPLGQECKICSKPCTIFRWIKERGQKPGKTQICVGCARYKNCCQSCMLDLQFGLPIAL 95
Query: 63 RDTALSINSNDAIPKSDVNREYFAEEHDRRARAG-IDYESSYGKARPSDTILKLQRTQPY 121
RD AL + ++ P +D+NRE+FA+ R G Y+S A + + K+++ + +
Sbjct: 96 RDAALKL--VESGPTNDINREFFAQNQQRLLSNGETAYDSQEASAAARNLVKKVEKRELH 153
Query: 122 Y---KRNRAHVCSFYVRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKLLN 178
KR V S + E R ++ E P+ + I +N V+L +
Sbjct: 154 SRPPKRKLDDVESKQILKE-ARASDASLNAERPL---FPVKKI------INGNVSLSI-- 201
Query: 179 KAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYT 238
++EPP+D+ I +L++ GV+ + + +R +F +G ++S+ + AFV +
Sbjct: 202 ------NMEPPKDKKIASLFLIGVEDELADYKIRKHFEQYGPLKSVVCSHRAKCAFVNFK 255
Query: 239 TREGAEKAAEELSN-KLVIKGLRLKLMWGKPQT-QRPEGESSDEVRQQAAIAHSGMLPRS 296
TR AE AA + +VI+G RLK+ WGKP++ PEGE + + A + G +
Sbjct: 256 TRSSAEIAAAASPDGNVVIEGFRLKVQWGKPRSLGGPEGEVRNA--KLADLVMRGSSHGN 313
Query: 297 LISQQQNQYQQPGAQDQAAPTPYFNIPPPPQQDR 330
SQ+ + +P IP P Q R
Sbjct: 314 KTSQKSTIKNIENEDHENTKSPAVAIPIDPNQPR 347
>sp|Q6C3L4|SLT11_YARLI Pre-mRNA-splicing factor SLT11 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SLT11 PE=3 SV=1
Length = 356
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 168/353 (47%), Gaps = 62/353 (17%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGR----DARFK--KTEICQTCSKLKNVCQVCLLDLEY 56
TK Y ECK+CTRPFTVFRW+P R +R K KT +C TCS+ KN CQ C LDL Y
Sbjct: 35 TKEKYGAECKMCTRPFTVFRWQPERAQKGSSRGKPLKTNVCLTCSRQKNCCQSCSLDLTY 94
Query: 57 GLPVQVRDTALSIN-------SNDAIPKSDVNREYFAEEHDRRAR-----AGIDYESSYG 104
GLP+ +RD AL + + + + + +++ A+ ++ + + + + G
Sbjct: 95 GLPLAIRDAALKMEQEGGGGGLSLSSSSNTITKQFIAQNYEEQLKQDQRLLTDNSVTGTG 154
Query: 105 KARPSDTIL--KLQRTQPYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGELSQQNIK 162
KA+ + L +L PY K Y +G+ + R +T ++++ K
Sbjct: 155 KAQSAAKGLLKQLANAMPYRKE-------LYEKGQKDK-RPADSRDSKALTADVTKIASK 206
Query: 163 DRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIE 222
G PV P+D SIK+L+ GV+ + E +R +F G
Sbjct: 207 LPLTGSTTPV----------------PKDASIKSLFFMGVEDDLPEHVIRKHFTETGGTI 250
Query: 223 SIKMHPQKAF-AFVTYTTREGAEKAAEELS-NKLVIKGLRLKLMWGKPQTQRPEGESSDE 280
S+ +A +V + TR AEKAA +S +LV+ G RL++ WGKP R G SSDE
Sbjct: 251 SLLTVVHRAHCGYVVFETRAAAEKAAAAISGGRLVLNGCRLRVAWGKP---RNLGSSSDE 307
Query: 281 VRQQAAIAHSGMLPRSLISQQQNQYQQPGA-QDQAAPTPYFNIPPPPQQDRAY 332
Q + M+ + L S+ + + A +D+AA PPPP Q Y
Sbjct: 308 ---QWKLGQ--MIKKYLRSKGGSSNKDGAAGRDEAA-------PPPPGQGIKY 348
>sp|Q6BMD1|SLT11_DEBHA Pre-mRNA-splicing factor SLT11 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=SLT11 PE=3 SV=2
Length = 359
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 135/306 (44%), Gaps = 48/306 (15%)
Query: 10 ECKICTRPFTVFRWRPGRDA-RFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTAL- 67
ECK+CTRPFTVFRW P + KKT IC TC++ +N CQ C+LD+ YG+P+++RDTAL
Sbjct: 29 ECKVCTRPFTVFRWNPNNGTNKSKKTIICMTCARARNCCQSCMLDITYGIPLEIRDTALK 88
Query: 68 --SINSNDAIPKSDV--NREYFAEEHDRRARAGIDYESSYGKARPSDTILKLQRTQPYYK 123
+ I S+ NRE A D++ + ++ K+ + + ++ K
Sbjct: 89 MAGLEHASQIKSSNTSQNREVKAIMADKQEAKYNNEDNDVNKSNDRSEMARDILSKLSEK 148
Query: 124 RNRAHVCSFYVRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKLLNKAGEM 183
N G + P + +++N V + K+L K
Sbjct: 149 LN---------------GNTNALIKKAPKNSKTTKKN---EIINVKNADISKILGKLPLG 190
Query: 184 PSLEPPEDE-SIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREG 242
S+ PE + + ++ G I + + D G+I+S+ + + +V +TTR
Sbjct: 191 GSIVVPETTPELSSFFLFGFSDDIPQYIISDFCNKFGKIKSLSIVHRAKCGYVVFTTR-- 248
Query: 243 AEKAAEELSNKLVIKGLR----------------LKLMWGKPQTQRPEGESSDEVRQQAA 286
KAAE + ++ GL +++ WGK Q+P +++E + +
Sbjct: 249 --KAAESFATTIMENGLNKNTATPGLLILNNKYPVRVSWGK---QKPLVTTNEECHKLSL 303
Query: 287 IAHSGM 292
+ M
Sbjct: 304 VITKVM 309
>sp|Q5A5N5|SLT11_CANAL Pre-mRNA-splicing factor SLT11 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=SLT11 PE=3 SV=1
Length = 303
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 10 ECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSI 69
EC+ CTRP+T++RW G + KT IC TC++ ++ CQ CLLD+ YG+P +RDTAL +
Sbjct: 29 ECRQCTRPYTIYRW--GNRKQGNKTIICITCARARHCCQSCLLDITYGIPTDLRDTALEM 86
Query: 70 NSNDAIPKSD--VNREYFAEEHDR 91
+ + KS NRE A D+
Sbjct: 87 AGLEPLTKSANPTNREVKAIMADK 110
>sp|Q750K9|SLT11_ASHGO Pre-mRNA-splicing factor SLT11 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SLT11
PE=3 SV=1
Length = 331
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 3 TKADYDKECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 62
T+A ECKICT PFT++ ++P R KT +C+ C+ +NVCQ C+LDL + LPV +
Sbjct: 21 TRAARGAECKICTLPFTLYHFKPPGAPRVTKTLVCRRCAAQRNVCQCCMLDLAWKLPVAL 80
Query: 63 RDTALSI--NSNDAIPKS--DVNREYFA 86
RD +S+ S++ P++ ++ R + A
Sbjct: 81 RDELVSLVQGSDERTPEASNEMVRRFLA 108
>sp|P38241|SLT11_YEAST Pre-mRNA-splicing factor SLT11 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ECM2 PE=1 SV=1
Length = 364
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 2 QTKADYDKECKICTRPFTVFRWRPG-RDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPV 60
TK ECKICT PFT++ ++ R KT IC C+ +N+CQ C+LD + +P+
Sbjct: 25 MTKIPQGSECKICTLPFTLYHFKTSKRSNNIIKTLICVRCATQRNICQCCMLDSRWHIPI 84
Query: 61 QVRDTALSINSNDAI----PKSDVNREYFAEEHDRRARAGIDYESS 102
Q+RD +S+ + + + K+D+ + + + ++ + A I + S
Sbjct: 85 QLRDHLISLVNEENVMTEEAKNDMMKRFLSLKNVKLGGAQITSDPS 130
>sp|Q54PH5|CWC2_DICDI Pre-mRNA-splicing factor cwc2 OS=Dictyostelium discoideum GN=cwc2
PE=3 SV=1
Length = 528
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 127 AHVCSFYVRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVN-DPVALKLLNKAGEMPS 185
A+ C ++ RG+C GA+C H +P + + + +G +N G
Sbjct: 125 ANFCCYFARGKCINGADCTSLHRIPTPEDDKRLRLTHDIFGRERHKTDRDDMNGVGSFS- 183
Query: 186 LEPPEDESIKTLYVGGVDARIT---EQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREG 242
+TLY+GG+ ++ E +R NF G IE +++ ++ +FV Y TR
Sbjct: 184 ------RDNRTLYIGGIKTNVSGSLEDMVRKNFEEWGRIEYVRVITNRSISFVRYLTRSS 237
Query: 243 AEKAAEELSNKLVIKGLRLKLMWG 266
AE A E ++++ + G L + W
Sbjct: 238 AEFAKEAMTDQTLDNGELLNIRWA 261
>sp|Q59W50|CWC2_CANAL Pre-mRNA-splicing factor CWC2 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=CWC2 PE=3 SV=1
Length = 363
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 38/207 (18%)
Query: 113 LKLQRTQPYYKRNR-AHVCSFYVRGECTRGAECPYRHEMP-----------VTGELSQQN 160
+++ Q + K N+ H+C F+ RG C G++C Y H +P G N
Sbjct: 66 VRISTDQGFTKANKNTHICLFFSRGCCYLGSKCQYFHRLPKESDNFKPTQDCFGRDKTAN 125
Query: 161 IKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDAR-ITEQDLRDNFYAHG 219
+D GV LNK TLYVGG+ + TEQ L NF G
Sbjct: 126 YRDDMDGVGS------LNKVN-------------CTLYVGGIHIKPNTEQLLVKNFQEFG 166
Query: 220 EIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLR--LKLMWGKPQTQRPEGES 277
+E +++ K AFVT T A+ A E + ++ +++G L + W + + P +
Sbjct: 167 TVEKVRVLQGKGCAFVTMKTENQAQFAKEAMQSQSLVEGSNEVLYVRWAN-EDKNPAAQK 225
Query: 278 SDEVRQQAAIAHSGMLPRSLISQQQNQ 304
++ RQQ +A+ + + L+ Q+ N+
Sbjct: 226 QEKKRQQ-ELAYDTV--KQLLEQESNK 249
>sp|Q6FKZ2|SLT11_CANGA Pre-mRNA-splicing factor SLT11 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SLT11 PE=3 SV=1
Length = 364
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 11 CKICTRPFTVFRWRPG-RDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSI 69
CKICT P+T++ ++ R A KT IC+ C+ +NVCQ C+LD++ + +Q+RD +SI
Sbjct: 39 CKICTLPYTLYHFKKSHRSADIIKTLICKKCAIQRNVCQCCMLDMKLHISIQLRDKLMSI 98
Query: 70 NS 71
S
Sbjct: 99 VS 100
>sp|Q9SX79|RB47C_ARATH Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana
GN=RBP47C PE=2 SV=1
Length = 432
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 179 KAGEMP--SLEPPEDESIKT-LYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFV 235
+ G MP +L PE + + T ++VGG+D+ +T++DL+ F GEI S+K+ K FV
Sbjct: 285 QGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFV 344
Query: 236 TYTTREGAEKAAEELSNKLVIKGLRLKLMWGK-PQTQRP 273
+ R AE+A E+L N VI ++L WG+ P ++P
Sbjct: 345 QFVNRPNAEEALEKL-NGTVIGKQTVRLSWGRNPANKQP 382
>sp|F4I3B3|RB47A_ARATH Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana
GN=RBP47A PE=2 SV=1
Length = 445
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 169 NDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHP 228
N AL L G S+ E + T++VGG+DA +TE+DL F GE+ S+K+
Sbjct: 302 NGSQALTLAGGHGGNGSMSDGESNN-STIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPV 360
Query: 229 QKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDE 280
K FV + R+ AE+A L N VI ++L WG+ ++ +S ++
Sbjct: 361 GKGCGFVQFANRQSAEEAIGNL-NGTVIGKNTVRLSWGRSPNKQWRSDSGNQ 411
>sp|Q9SX80|R47CP_ARATH Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana
GN=RBP47C' PE=2 SV=1
Length = 434
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 179 KAGEMPS--LEPPEDESIKT-LYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFV 235
+ G MPS E ++I T ++VGG+D+ +T++DL+ F GEI S+K+ K FV
Sbjct: 287 QGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFV 346
Query: 236 TYTTREGAEKAAEELSNKLVIKGLRLKLMWGK-PQTQRP 273
+ R AE+A E+L N VI ++L WG+ P ++P
Sbjct: 347 QFVNRPNAEEALEKL-NGTVIGKQTVRLSWGRNPANKQP 384
>sp|Q6C007|CWC2_YARLI Pre-mRNA-splicing factor CWC2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CWC2 PE=3 SV=1
Length = 382
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 104/228 (45%), Gaps = 28/228 (12%)
Query: 95 AGIDYESSYGKARPSDTILKLQRTQPYYKRNR---AHVCSFYVRGECTRGAECPYRHEMP 151
+G D E + +D + R Y + ++ ++ C ++ RG CT+G +C + H +P
Sbjct: 91 SGGDKEDEKFNQKKADGRCSIARDSGYTRADKVPGSYFCLYFARGLCTQGHKCEFLHRLP 150
Query: 152 VTGELSQQNI----KDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGV----- 202
V ++ +DR++ D + G + + +TLYVG +
Sbjct: 151 VLTDMFSPTTDCFGRDRFFDYRDD-----MGGIGSISRVN-------RTLYVGRIHVSDA 198
Query: 203 -DARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRL 261
A ++ + +F G+++ I++ K AFVTY T A+ A E ++++ + G L
Sbjct: 199 AKAGALDEIVSRHFSEWGDVDRIRVLHDKGVAFVTYATEVNAQFAKEAMAHQSLDSGEVL 258
Query: 262 KLMWGKPQTQRPEGESSDEVR--QQAAIAHSGMLPRSLISQQQNQYQQ 307
+ W Q P ++ ++ R + AA A +LP+ + + + + ++
Sbjct: 259 NVRWAT-QDPDPLAQAREQRRLEENAAEAIKRLLPQEYVDELEGRAKK 305
>sp|Q4WU07|CWC2_ASPFU Pre-mRNA-splicing factor cwc2 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cwc2 PE=3
SV=1
Length = 414
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 95 AGIDYESSYGKARPSDTILKLQRTQPYYKRNR---AHVCSFYVRGECTRGAECPYRHEMP 151
+G D E Y + + + + Y + ++ ++ C F+ RG C +G EC Y H +P
Sbjct: 97 SGGDREDKYLSKHAAPSRCNIAKDSGYTRADKVPGSYFCLFFARGVCPKGHECEYLHRLP 156
Query: 152 VTGELSQQNI----KDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDAR-I 206
+L N+ +D++ D + G + S +TLYVG +
Sbjct: 157 TLHDLFNPNVDCFGRDKFSDYRDDM--------GGVGSFT----RQNRTLYVGRIHVTDD 204
Query: 207 TEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWG 266
E+ + +F G+I+ I++ + AFVTYT A+ A E ++++ + L + W
Sbjct: 205 IEEVVSRHFAEWGQIDRIRVLTSRGVAFVTYTNEANAQFAKEAMAHQSLDHNEILNVRWA 264
Query: 267 ----KPQTQRPEGESSDEVRQQAAIAHSGMLPRSLISQQQNQ 304
P Q+ E + +QAA A LP +++ + +
Sbjct: 265 TVDPNPLAQKREAR---RLEEQAAEAVRRALPAEFVAELEGR 303
>sp|Q51TF7|CWC2_MAGO7 Pre-mRNA-splicing factor CWC2 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=CWC2 PE=3 SV=2
Length = 394
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 27/218 (12%)
Query: 95 AGIDYESSYGKARPSDTILKLQRTQPYYKRNR---AHVCSFYVRGECTRGAECPYRHEMP 151
+G D E Y + + + Y K ++ ++ C F+ RG C +G +C Y H +P
Sbjct: 72 SGGDREDKYTSQTAAKGRCNVAKDSGYTKADQTTGSYFCLFFARGVCPKGQDCEYLHRLP 131
Query: 152 VTGELSQQNI----KDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDAR-I 206
+L N+ +DR+ D + G + S +T+YVG +
Sbjct: 132 TLHDLYSPNVDCFGRDRFSDYRDDM--------GGVGSFM----RQNRTVYVGRIHVTDD 179
Query: 207 TEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWG 266
E+ + +F G++E I++ Q+ AF+TYT A+ A E ++++ + L + W
Sbjct: 180 IEEVVARHFAEWGQVERIRVLNQRGVAFITYTNEANAQFAKEAMAHQSLDHNEILNVRWA 239
Query: 267 ----KPQTQRPEGESSDEVRQQAAIAHSGMLPRSLISQ 300
P Q E V +QAA A LP +++
Sbjct: 240 TADPNPMAQAREAR---RVEEQAAEAVRRALPAEFVAE 274
>sp|Q9LEB3|RBP47_NICPL Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia
GN=RBP47 PE=1 SV=1
Length = 428
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 191 DESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEEL 250
D S T++VGG+D+ +T+++LR +F GE+ S+K+ K FV ++ R A++A ++L
Sbjct: 291 DSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKL 350
Query: 251 SNKLVIKGLRLKLMWGKP 268
S ++ K ++L WG+
Sbjct: 351 SGAIIGK-QAVRLSWGRS 367
>sp|Q6BLU8|CWC2_DEBHA Pre-mRNA-splicing factor CWC2 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CWC2 PE=3 SV=2
Length = 339
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 23/165 (13%)
Query: 127 AHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNI--KDRYYGVNDPVALKLLNKAGE 182
A +C F+ RG C G +C Y H +P + + Q+ +D+ D +N G
Sbjct: 97 APLCLFFARGCCYLGKKCSYYHRLPSDTDYFIPTQDCFGRDKTSDYKDD-----MNGVGS 151
Query: 183 MPSLEPPEDESIKTLYVGGV--DARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTR 240
+S +TLY+GG+ D ++ E L +F G I+ I++ KA AFVT+ T
Sbjct: 152 F-------SKSNRTLYIGGLHMDDKM-ENTLTKHFQEFGSIDKIRVLHSKACAFVTFRTE 203
Query: 241 EGAEKAAEELSNKLVIKGLRLKLMWG----KPQTQRPEGESSDEV 281
A+ A E + N+ + L + W P+ QR E +EV
Sbjct: 204 NEAQFAKEAMQNQSLDGNEVLNIRWANEDPNPEAQRQEKRRLEEV 248
>sp|Q0WW84|RB47B_ARATH Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana
GN=RBP47B PE=2 SV=1
Length = 435
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 181 GEMPSLEPPEDESIK-TLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTT 239
G M + ES T++VGG+D + ++DLR F GE+ S+K+ K FV +
Sbjct: 306 GSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFAD 365
Query: 240 REGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDE 280
R+ AE A E L N VI ++L WG+ ++ G+S +
Sbjct: 366 RKSAEDAIESL-NGTVIGKNTVRLSWGRSPNKQWRGDSGQQ 405
>sp|Q6T412|CWC2_LEPMC Pre-mRNA-splicing factor CWC2 OS=Leptosphaeria maculans GN=CWC2
PE=3 SV=1
Length = 421
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 27/218 (12%)
Query: 95 AGIDYESSYGKARPSDTILKLQRTQPYYKRNR---AHVCSFYVRGECTRGAECPYRHEMP 151
+G D E Y + + R Y K ++ ++ C F+ RG C +G +C Y H +P
Sbjct: 94 SGGDREDKYLSQTAAQGRCNVARDSGYTKADKTPGSYFCLFFARGICPKGVDCEYLHRLP 153
Query: 152 VTGELSQQNI----KDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDAR-I 206
++ NI +D++ D + G + S + +TLY+G +
Sbjct: 154 TVTDIFPSNIDCFGRDKHSDYRDDM--------GGVGSFQ----RQNRTLYIGRIHVTDD 201
Query: 207 TEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWG 266
E+ + +F G+IE ++ + AFVTY ++ A E ++++ + L + W
Sbjct: 202 IEEIVARHFQEWGQIERTRVLTARGVAFVTYMNEANSQFAKEAMAHQSLDHNEILNVRWA 261
Query: 267 ----KPQTQRPEGESSDEVRQQAAIAHSGMLPRSLISQ 300
PQ + E + + +QAA A LP + +++
Sbjct: 262 TVDPNPQAAKRE---AHRIEEQAAEAIRKALPAAYVAE 296
>sp|Q5BB35|CWC2_EMENI Pre-mRNA-splicing factor cwc2 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cwc2
PE=3 SV=1
Length = 417
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 27/218 (12%)
Query: 95 AGIDYESSYGKARPSDTILKLQRTQPYYKRNR---AHVCSFYVRGECTRGAECPYRHEMP 151
+G D E Y + + + R Y + ++ ++ C F+ RG C +G EC Y H +P
Sbjct: 102 SGGDREDKYLSKTAAPSRCNIARDSGYTRADKVRGSYFCLFFARGICPKGHECEYLHRLP 161
Query: 152 VTGELSQQNI----KDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDAR-I 206
+L N+ +D++ D + G + S +TLYVG +
Sbjct: 162 TLHDLFNPNVDCFGRDKHSDYRDDM--------GGVGSFM----RQNRTLYVGRIHVTDD 209
Query: 207 TEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWG 266
E+ + +F G+I+ ++ + AFVTYT A+ A E ++++ + L + W
Sbjct: 210 IEEVVARHFAEWGQIDRTRVLTSRGVAFVTYTNEANAQFAKEAMAHQSLDHNEILNVRWA 269
Query: 267 ----KPQTQRPEGESSDEVRQQAAIAHSGMLPRSLISQ 300
P Q+ E + +QAA A LP +++
Sbjct: 270 TVDPNPLAQKREAR---RLEEQAAEAVRRALPAEFVAE 304
>sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1
Length = 386
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 21/160 (13%)
Query: 196 TLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLV 255
T+Y GGV + +TEQ +R F G+I I++ P K ++FV +++ E A A + N
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSV-NGTT 273
Query: 256 IKGLRLKLMWGK-----------------PQTQRPEGESSDEVRQQAAIAHSGMLPRSLI 298
I+G +K WGK P T G+ +Q +G +
Sbjct: 274 IEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQWYGNAQQIGQYVPNGWQVPAYG 333
Query: 299 SQQQNQYQQPGAQDQ-AAP--TPYFNIPPPPQQDRAYYPS 335
Q QQ Q Q +AP P +++PPP Q+ + PS
Sbjct: 334 VYGQPWSQQGFNQTQSSAPWMGPNYSVPPPQGQNGSMLPS 373
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 190 EDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKA----FAFVTYTTREGAEK 245
EDE KTLYVG + +TE + F G ++ KM A + FV + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 246 AAEELSNKLVIKGLRLKLMWG-KPQTQRPEGESSDEVRQQAAIAH 289
A ++ + ++ G +K+ W P +Q+ + SS V Q + H
Sbjct: 62 ALAAMNGRKIM-GKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDH 105
>sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1
Length = 392
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Query: 196 TLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLV 255
T+Y GG+ + +T+Q +R F G+I I++ P+K ++FV ++T E A A + N
Sbjct: 223 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSV-NGTT 281
Query: 256 IKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSLISQQQNQYQQPGAQDQAA 315
I+G +K WGK ES D + + +S S + QY Q A
Sbjct: 282 IEGHVVKCYWGK--------ESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQV 333
Query: 316 PTPY 319
P PY
Sbjct: 334 P-PY 336
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1
Length = 375
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Query: 196 TLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLV 255
T+Y GG+ + +T+Q +R F G+I I++ P+K ++FV ++T E A A + N
Sbjct: 206 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSV-NGTT 264
Query: 256 IKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSLISQQQNQYQQPGAQDQAA 315
I+G +K WGK ES D + + +S S + QY Q A
Sbjct: 265 IEGHVVKCYWGK--------ESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQV 316
Query: 316 PTPY 319
P PY
Sbjct: 317 P-PY 319
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/106 (18%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 184 PSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKM------HPQKAFAFVTY 237
PS + + + ++VG + IT +D++ F G+I ++ K + FV++
Sbjct: 86 PSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 145
Query: 238 TTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQ 283
+ AE A + + + G +++ W + P+ + +Q
Sbjct: 146 YNKLDAENAIVHMGGQW-LGGRQIRTNWATRKPPAPKSTQENNTKQ 190
>sp|Q9SAB3|RB45B_ARATH Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana
GN=RBP45B PE=1 SV=1
Length = 405
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 190 EDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEE 249
D + T++VGG+DA +T+ L++ F +GEI +K+ K FV ++ + AE+A
Sbjct: 256 NDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRM 315
Query: 250 LSNKLVIKGLRLKLMWGKPQTQRPEGESS 278
L N + + G ++L WG+ + + G+ S
Sbjct: 316 L-NGVQLGGTTVRLSWGRSPSNKQSGDPS 343
Score = 35.0 bits (79), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 179 KAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQK------AF 232
+A PS++P + I+TL++G + + E L F GE+ S K+ K +
Sbjct: 46 QAAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGY 105
Query: 233 AFVTYTTREGAEKAAEELSN 252
F+ + + AE+ + +N
Sbjct: 106 GFIEFASHAAAERVLQTFNN 125
>sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1 SV=3
Length = 386
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 196 TLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLV 255
T+Y GGV + +TEQ +R F G+I I++ P K ++FV + + E A A + N
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSV-NGTT 273
Query: 256 IKGLRLKLMWGK 267
I+G +K WGK
Sbjct: 274 IEGHVVKCYWGK 285
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 190 EDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKA----FAFVTYTTREGAEK 245
EDE KTLYVG + +TE + F G ++ KM A + FV + A
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAA 61
Query: 246 AAEELSNKLVIKGLRLKLMWG-KPQTQRPEGESSDEVRQQAAIAH 289
A ++ + ++ G +K+ W P +Q+ + SS V Q + H
Sbjct: 62 ALAAMNGRKIM-GKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDH 105
>sp|Q6CJI0|SLT11_KLULA Pre-mRNA-splicing factor SLT11 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=SLT11 PE=3 SV=1
Length = 302
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 9 KECKICTRPFTVFRWRPGRDARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTA-- 66
+ECK CT PF + + T C C+ +CQVCL D E+G+P+ +R++
Sbjct: 31 RECKFCTFPFDSYSYTINHTTF--HTICCPKCATKNLICQVCLNDFEHGIPMHLRNSMKQ 88
Query: 67 -LSINSNDAIPKSDVNREYFAEEHDRRARAGID 98
L+ N++ IPK+D+ + + + A ID
Sbjct: 89 LLNENADSVIPKNDMMKRFIGLSSKQVAPLNID 121
>sp|Q9FPJ8|RB45A_ARATH Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana
GN=RBP45A PE=2 SV=1
Length = 387
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 190 EDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEE 249
D + T++VGG+DA +T+ +L+ F GE+ +K+ P K FV Y + AE A
Sbjct: 255 NDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSV 314
Query: 250 LSNKLVIKGLRLKLMWGK 267
L N + G ++L WG+
Sbjct: 315 L-NGTQLGGQSIRLSWGR 331
>sp|Q9LEB4|RBP45_NICPL Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia
GN=RBP45 PE=1 SV=1
Length = 409
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 191 DESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEEL 250
D + T++VGG+D + E+ LR F +GE+ +K+ K FV + TR AE+A L
Sbjct: 278 DPNNTTIFVGGLDPTVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSL 337
Query: 251 SNKLVIKGLRLKLMWGK 267
N + G ++L WG+
Sbjct: 338 -NGTQLGGQSIRLSWGR 353
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,725,536
Number of Sequences: 539616
Number of extensions: 5539936
Number of successful extensions: 19797
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 514
Number of HSP's that attempted gapping in prelim test: 18667
Number of HSP's gapped (non-prelim): 1345
length of query: 344
length of database: 191,569,459
effective HSP length: 118
effective length of query: 226
effective length of database: 127,894,771
effective search space: 28904218246
effective search space used: 28904218246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)