BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048754
(625 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|351727583|ref|NP_001235886.1| circadian clock-associated FKF1 [Glycine max]
gi|87138101|gb|ABD28287.1| circadian clock-associated FKF1 [Glycine max]
Length = 625
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/622 (86%), Positives = 565/622 (90%), Gaps = 9/622 (1%)
Query: 5 KDKEEEEEGEGVIQGSGKRQKCSFEGGGGGGGDDTE-LSLKPGLLFYPTTPTSFVVADAF 63
KDKE+ ++ +GKR KC ++ L LKPG FYPTTPTSFVV+DA
Sbjct: 10 KDKED-------VRNTGKRLKCMRNEEEEVYEEEESELPLKPGFFFYPTTPTSFVVSDAL 62
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
+PDFPIIYVNKVFEI TGYRADE LGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE
Sbjct: 63 EPDFPIIYVNKVFEISTGYRADEALGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 122
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKE 183
G+EFQGELLNF+KDGTPLVNRLRLAPI DDDGTVTH+IGIQ+FSEA IDLN VSYPVFKE
Sbjct: 123 GVEFQGELLNFRKDGTPLVNRLRLAPIHDDDGTVTHVIGIQLFSEANIDLNRVSYPVFKE 182
Query: 184 NCNQQYDQSAQYF-SGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRR 242
CNQ +D++ +Y G S SQHQ++CGILQLSDEVLAHNILSRLTPRDVASIGSVCRR
Sbjct: 183 TCNQDFDKTGKYNPKSGQSLYSQHQEMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRR 242
Query: 243 IRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKFTVRGAV 302
IRQLTKNEHVRKMVCQNAWG+EVTG LELMTKKLGWGRL RELTTLEAVCWRK TV GAV
Sbjct: 243 IRQLTKNEHVRKMVCQNAWGKEVTGTLELMTKKLGWGRLTRELTTLEAVCWRKLTVGGAV 302
Query: 303 EPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHT 362
EPSRCNFSACAAGNRLVLFGGEGV+MQPMDDTFVLNLDA NPEWRRVSVKSSPPGRWGHT
Sbjct: 303 EPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVSVKSSPPGRWGHT 362
Query: 363 LSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSK 422
LS LNGSWLVVFGGCGRQGLLNDVFVLDLDA+QPTW EV GG PPLPRSWHSSC IEGSK
Sbjct: 363 LSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAQQPTWREVCGGTPPLPRSWHSSCTIEGSK 422
Query: 423 LVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGL 482
LVVSGGCTDAGVLLSDTYLLDLTTD P WREIPTSW+PPSRLGHSLSVYGRTK+LMFGGL
Sbjct: 423 LVVSGGCTDAGVLLSDTYLLDLTTDNPTWREIPTSWAPPSRLGHSLSVYGRTKILMFGGL 482
Query: 483 AKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRI 542
AKSGHLRLRSGE+YTIDL DE+PQW+QLE +AFTG+ SQSAVVPPPRLDHVAVSMPCGRI
Sbjct: 483 AKSGHLRLRSGEAYTIDLEDEQPQWRQLEYSAFTGLASQSAVVPPPRLDHVAVSMPCGRI 542
Query: 543 IIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGH 602
IIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGH
Sbjct: 543 IIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGH 602
Query: 603 TGEEWVLNELHELCLASKQDSD 624
T EEW+LNELHELCLAS+QDSD
Sbjct: 603 TXEEWILNELHELCLASRQDSD 624
>gi|449449016|ref|XP_004142261.1| PREDICTED: adagio protein 3-like [Cucumis sativus]
Length = 629
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/633 (84%), Positives = 567/633 (89%), Gaps = 19/633 (3%)
Query: 3 SKKDKEEEEEGEGVIQGSGKRQKCS--------FEGGGGGGGDDTELSLKPGLLFYPTTP 54
+K D E E + SGKR KCS TEL LKPGL FYP P
Sbjct: 4 AKNDDEPE------LHSSGKRLKCSKHDDEQYHLGNEEEEEEQVTELPLKPGLFFYPMAP 57
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
TSFVV+DA +PDFPIIYVNKVFEIFTGYRADEVLG+NCRFLQYRDPRAQRRHPLVDPVVV
Sbjct: 58 TSFVVSDALEPDFPIIYVNKVFEIFTGYRADEVLGQNCRFLQYRDPRAQRRHPLVDPVVV 117
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLN 174
SEIRRCLEEG+EFQGELLNF+KDGTP+VNRLRLAPI DDDGTVTHIIGIQ+FSE KIDLN
Sbjct: 118 SEIRRCLEEGVEFQGELLNFRKDGTPMVNRLRLAPIHDDDGTVTHIIGIQVFSETKIDLN 177
Query: 175 HVSYPVFKENCNQQYD---QSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPR 231
+SYPVFKENC +YD +SA SP H++ICGILQLSDEVLAHNILSRLTPR
Sbjct: 178 RLSYPVFKENCAIKYDLSGKSAHLID--QSPFGHHKEICGILQLSDEVLAHNILSRLTPR 235
Query: 232 DVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAV 291
DVAS+GSVCRRIRQLTKNEH+RKMVCQNAWGREVTG LE MTKKLGWGRLARELTTLEAV
Sbjct: 236 DVASVGSVCRRIRQLTKNEHLRKMVCQNAWGREVTGTLEQMTKKLGWGRLARELTTLEAV 295
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
CWRK TV GAVEP RCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV
Sbjct: 296 CWRKMTVGGAVEPLRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 355
Query: 352 KSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
KSSPPGRWGHTLS LNGSWLVVFGGCG QGLLNDVFVLDLDA+QPTW E+SGGAPPLPRS
Sbjct: 356 KSSPPGRWGHTLSCLNGSWLVVFGGCGSQGLLNDVFVLDLDAQQPTWKEISGGAPPLPRS 415
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
WHSSC+IEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKP WREIPTS +PPSRLGHSLSVY
Sbjct: 416 WHSSCMIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPTWREIPTSGTPPSRLGHSLSVY 475
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLD 531
GRTK+LMFGGLAKSGHLRLRSGE+YTIDL +EEPQW+QLEC+AFTG+G QSAVVPPPRLD
Sbjct: 476 GRTKILMFGGLAKSGHLRLRSGEAYTIDLEEEEPQWRQLECSAFTGIGGQSAVVPPPRLD 535
Query: 532 HVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVV 591
HVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP+EEKPSWRILNVPGQPPKFAWGHSTCVV
Sbjct: 536 HVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPAEEKPSWRILNVPGQPPKFAWGHSTCVV 595
Query: 592 GGTRVLVLGGHTGEEWVLNELHELCLASKQDSD 624
GGTRVLVLGGHTGEEW+LNELHELCLAS+QDSD
Sbjct: 596 GGTRVLVLGGHTGEEWILNELHELCLASRQDSD 628
>gi|255584973|ref|XP_002533198.1| Adagio protein, putative [Ricinus communis]
gi|223526996|gb|EEF29190.1| Adagio protein, putative [Ricinus communis]
Length = 630
Score = 1089 bits (2817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/626 (84%), Positives = 570/626 (91%), Gaps = 10/626 (1%)
Query: 7 KEEEEEGEGVIQGSGKRQKCS---------FEGGGGGGGDDTELSLKPGLLFYPTTPTSF 57
KEEE + + + SGKR KC+ E ++ E L YP TPTS
Sbjct: 5 KEEENDDDEQLHSSGKRLKCATPEQPQEHEEEEEEEEEEEEEEEMEHIPFLMYPETPTSI 64
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
VV+DA +PDFPIIYVNKVFEIFTGYRADEVLG+NCRFLQ+RDPRAQRRHPLVDPVVVSE+
Sbjct: 65 VVSDALEPDFPIIYVNKVFEIFTGYRADEVLGQNCRFLQFRDPRAQRRHPLVDPVVVSEV 124
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVS 177
RRCLEEGIEFQGELLNF+KDGTPL+NRLRLA IRDDDG VTH+IGIQ+FSEAKIDLN VS
Sbjct: 125 RRCLEEGIEFQGELLNFRKDGTPLINRLRLAHIRDDDGIVTHVIGIQMFSEAKIDLNRVS 184
Query: 178 YPVFKENCNQQYDQSAQY-FSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASI 236
YPVFKE+CNQ+ QSA+Y G SP +QHQ+ICGIL+LSDEVLAHNILSRLTPRDVASI
Sbjct: 185 YPVFKESCNQKSYQSAKYPHLSGSSPFTQHQEICGILRLSDEVLAHNILSRLTPRDVASI 244
Query: 237 GSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKF 296
GSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAV WRK
Sbjct: 245 GSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVSWRKL 304
Query: 297 TVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPP 356
TV GAVEPSRCNFSACAAGNRLVLFGGEGV+MQPMDDTFVLNLDAANPEWRRVSVKSSPP
Sbjct: 305 TVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAANPEWRRVSVKSSPP 364
Query: 357 GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSC 416
GRWGHTLS LNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIE+SGGAPPLPRSWHSSC
Sbjct: 365 GRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEISGGAPPLPRSWHSSC 424
Query: 417 IIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKV 476
IEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKP+W+EIPTSW+PPSRLGHSLSVYGR+K+
Sbjct: 425 TIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPIWKEIPTSWAPPSRLGHSLSVYGRSKI 484
Query: 477 LMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVS 536
LMFGGLAKSGHLRLRSGE+YTIDL D+EPQW+QL+CNAFTGVGSQS+VVPPPRLDHVA++
Sbjct: 485 LMFGGLAKSGHLRLRSGEAYTIDLEDDEPQWRQLDCNAFTGVGSQSSVVPPPRLDHVALT 544
Query: 537 MPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRV 596
MPCGRIIIFGGS+AGLHSPSQLFLLDPSE KPSWR LNVPGQ PKFAWGHSTCVVGGTRV
Sbjct: 545 MPCGRIIIFGGSMAGLHSPSQLFLLDPSEAKPSWRTLNVPGQRPKFAWGHSTCVVGGTRV 604
Query: 597 LVLGGHTGEEWVLNELHELCLASKQD 622
LVLGGHTGEEW+LNELHELCLAS+QD
Sbjct: 605 LVLGGHTGEEWILNELHELCLASRQD 630
>gi|356524615|ref|XP_003530924.1| PREDICTED: adagio protein 3-like [Glycine max]
Length = 632
Score = 1078 bits (2787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/638 (83%), Positives = 564/638 (88%), Gaps = 21/638 (3%)
Query: 1 MTSKKDKEEEEEGEGVIQGSGKRQKCS-------------FEGGGGGGGDDTELSLKPGL 47
M K+KE+ +Q SGKR KC+ +D+EL LK GL
Sbjct: 1 MAMPKEKED-------VQNSGKRLKCTRNEEEEKEQYEQVEADEEEEEEEDSELPLKLGL 53
Query: 48 LFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP 107
FYPT PTSFVV+DA +PDFPIIYVNKVFEI TGYRADE LGRNCRFLQYRD RAQRRHP
Sbjct: 54 FFYPTIPTSFVVSDALEPDFPIIYVNKVFEIATGYRADEALGRNCRFLQYRDRRAQRRHP 113
Query: 108 LVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFS 167
LVDPVVVSEIRRCLEEG+EFQGELLNF+KDGTPLVNR+RL I DDDGTVTH+IGIQ+FS
Sbjct: 114 LVDPVVVSEIRRCLEEGVEFQGELLNFRKDGTPLVNRVRLTLIHDDDGTVTHVIGIQLFS 173
Query: 168 EAKIDLNHVSYPVFKENCNQQYDQSAQYF-SGGHSPLSQHQDICGILQLSDEVLAHNILS 226
EA IDLN VSYPVFKE CNQ +D++ +Y G S SQHQ++C ILQLSDEVLAHNILS
Sbjct: 174 EANIDLNRVSYPVFKETCNQDFDKNGKYTPKSGQSLYSQHQEMCSILQLSDEVLAHNILS 233
Query: 227 RLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELT 286
RLTPRDVASIGSVCRR+RQLTKNEHVRKMVCQNAWG+EVTG LELMTKK+GWGRL RELT
Sbjct: 234 RLTPRDVASIGSVCRRVRQLTKNEHVRKMVCQNAWGKEVTGTLELMTKKMGWGRLTRELT 293
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
TLEAVCWRK TV GAVEPSRCNFSACAAGNRLVLFGGEGV+MQPMDDTFVLNLDA NPEW
Sbjct: 294 TLEAVCWRKLTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEW 353
Query: 347 RRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
RRVSVKSSPPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVFVLDLDA+QPTW EV GG P
Sbjct: 354 RRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAQQPTWREVCGGTP 413
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGH 466
PLPRSWHSSC IEGSKLVVSGGCTD GVLLSDTYLLDLTTD P+WREIPTSW+PPSRLGH
Sbjct: 414 PLPRSWHSSCTIEGSKLVVSGGCTDTGVLLSDTYLLDLTTDNPIWREIPTSWAPPSRLGH 473
Query: 467 SLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVP 526
SLSVYGRTK+LMFGGLAKSGHLRLRSGE+YTIDL DE+PQW+QLE +AFTG+ SQSAVVP
Sbjct: 474 SLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEQPQWRQLEYSAFTGLASQSAVVP 533
Query: 527 PPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGH 586
PPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGH
Sbjct: 534 PPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGH 593
Query: 587 STCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDSD 624
STCVVGGTRVLVLGGHTGEEW+LNELHELCLAS+ DSD
Sbjct: 594 STCVVGGTRVLVLGGHTGEEWILNELHELCLASRHDSD 631
>gi|224108263|ref|XP_002314780.1| predicted protein [Populus trichocarpa]
gi|222863820|gb|EEF00951.1| predicted protein [Populus trichocarpa]
Length = 587
Score = 1075 bits (2781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/580 (88%), Positives = 543/580 (93%), Gaps = 1/580 (0%)
Query: 46 GLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRR 105
GL F+PTTP SFVV+DA + DFPIIYVNKVFEIFTGY A EVLGRNCRFLQYRDPRAQRR
Sbjct: 7 GLFFHPTTPVSFVVSDALELDFPIIYVNKVFEIFTGYHAHEVLGRNCRFLQYRDPRAQRR 66
Query: 106 HPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
HPLVDP VVSEIRRCLEEG+EFQGELLNF+KDGTPLVNRLRL PI DDDG +T +IGIQ+
Sbjct: 67 HPLVDPAVVSEIRRCLEEGMEFQGELLNFRKDGTPLVNRLRLVPIHDDDGIITQVIGIQV 126
Query: 166 FSEAKIDLNHVSYPVFKENCNQQYDQSAQYF-SGGHSPLSQHQDICGILQLSDEVLAHNI 224
FSEAKIDLNHVSYPV+KE CNQ+ D SA Y G SP +QHQ+ICGILQLSDEVLAHNI
Sbjct: 127 FSEAKIDLNHVSYPVYKETCNQRSDHSANYSPRHGQSPFTQHQEICGILQLSDEVLAHNI 186
Query: 225 LSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARE 284
LSRLTPRDVASIGSVCRRIRQLTKNE VRKMVCQNAWGREVTGALELMTKKLGWGRLARE
Sbjct: 187 LSRLTPRDVASIGSVCRRIRQLTKNEQVRKMVCQNAWGREVTGALELMTKKLGWGRLARE 246
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
LTTLEAVCWRK TV GAVEPSRCNFSACA GNRLVLFGGEGVNMQPMDDTFVLNLDAANP
Sbjct: 247 LTTLEAVCWRKVTVGGAVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 306
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
W+R+SVKSSPPGRWGHTLS LNGSWLV+FGGCGRQGLLNDVFV+DLDAKQPTW EVSGG
Sbjct: 307 VWQRISVKSSPPGRWGHTLSCLNGSWLVLFGGCGRQGLLNDVFVMDLDAKQPTWKEVSGG 366
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
PPLPRSWHSSC IEGSKLVVSGGCTDAGVLLSDTYLLDLT DKP+WREIP +W+PPSRL
Sbjct: 367 TPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDKPIWREIPATWAPPSRL 426
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
GHSLSVYGRTK+LMFGGLAKSGHLRLRSGE+YTIDL DEEP W+QLEC+A TG+GSQS+V
Sbjct: 427 GHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEEPHWRQLECSALTGIGSQSSV 486
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 584
VPPPRLDHVAVSMPCGR IIFGGSIAGLHSPSQLFLLDP+EEKPSWRILNVPGQPPK AW
Sbjct: 487 VPPPRLDHVAVSMPCGRNIIFGGSIAGLHSPSQLFLLDPAEEKPSWRILNVPGQPPKLAW 546
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDSD 624
GHSTCVVGGTRVLVLGGHTGEEW+LNELHELCLASKQDS+
Sbjct: 547 GHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASKQDSE 586
>gi|357521357|ref|XP_003630967.1| Flavin-binding kelch repeat F-box [Medicago truncatula]
gi|355524989|gb|AET05443.1| Flavin-binding kelch repeat F-box [Medicago truncatula]
Length = 635
Score = 1071 bits (2770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/631 (82%), Positives = 559/631 (88%), Gaps = 9/631 (1%)
Query: 3 SKKDKEEEEEGEGVIQGSGKRQKC------SFEGGGGGGGDDTELSLKPGLLFYPTTPTS 56
++ KE+EEE Q GKR KC E +++EL LKP L FYPTTPTS
Sbjct: 4 ARDKKEDEEEVHNQNQKVGKRLKCMNMMKNEQEENQVVDEEESELPLKPELFFYPTTPTS 63
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
FVV+DA + DFPIIYVNKVFEI TGYRA E LGRNCRFLQYRDPRAQRRHPLVDPVVVSE
Sbjct: 64 FVVSDALESDFPIIYVNKVFEISTGYRAHEALGRNCRFLQYRDPRAQRRHPLVDPVVVSE 123
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHV 176
IRRCLEEGIEFQGELLNF+KDGTPLVNRLRL PI DDDG VTHIIGIQIFSEA IDLN V
Sbjct: 124 IRRCLEEGIEFQGELLNFRKDGTPLVNRLRLTPIHDDDGVVTHIIGIQIFSEANIDLNRV 183
Query: 177 SYPVFKENCNQQYDQSAQYFSGGHSPL---SQHQDICGILQLSDEVLAHNILSRLTPRDV 233
SYPVF+E C Q +D++A+Y L + +++CGILQLSDEVLAHNILSRLTPRDV
Sbjct: 184 SYPVFRETCIQDFDKNAKYSPKSGKLLYTPQKREEMCGILQLSDEVLAHNILSRLTPRDV 243
Query: 234 ASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCW 293
ASIGSVCRRIRQLTKNEHVRKMVCQNAWG+EVTG LELMTKKLGWGRL RELTTLEAVCW
Sbjct: 244 ASIGSVCRRIRQLTKNEHVRKMVCQNAWGKEVTGTLELMTKKLGWGRLTRELTTLEAVCW 303
Query: 294 RKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKS 353
+K TV G VEPSRCNFSACAAGNRLVLFGGEGV+MQPMDDTFVLNLDA NPEW+RVSV S
Sbjct: 304 KKVTVGGGVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWQRVSVIS 363
Query: 354 SPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWH 413
SPPGRWGHTLS LN SWLVVFGGCGRQGLLNDVFVLDLDA+QPTW EV G APPLPRSWH
Sbjct: 364 SPPGRWGHTLSCLNSSWLVVFGGCGRQGLLNDVFVLDLDAQQPTWKEVFGEAPPLPRSWH 423
Query: 414 SSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGR 473
SSC IEGSKLVVSGGCTDAGVLLSDTYLLDLT D P WREIPTSW+PPSRLGHSLSVYGR
Sbjct: 424 SSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDNPTWREIPTSWTPPSRLGHSLSVYGR 483
Query: 474 TKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHV 533
TK+LMFGGLAKSGHLRLRSGE+YTIDL E+PQW+QLEC+AFTG+ +Q+AVVPPPRLDHV
Sbjct: 484 TKILMFGGLAKSGHLRLRSGEAYTIDLEAEQPQWRQLECSAFTGLSNQNAVVPPPRLDHV 543
Query: 534 AVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGG 593
AVSMPCGR+IIFGGSIAGLHSPSQLFLLDP+EEKP+WRILNVPG+PPKFAWGHSTCVVGG
Sbjct: 544 AVSMPCGRVIIFGGSIAGLHSPSQLFLLDPAEEKPTWRILNVPGEPPKFAWGHSTCVVGG 603
Query: 594 TRVLVLGGHTGEEWVLNELHELCLASKQDSD 624
TRVLVLGGHTGEEWVLNELHELCLAS+QDSD
Sbjct: 604 TRVLVLGGHTGEEWVLNELHELCLASRQDSD 634
>gi|224101897|ref|XP_002312465.1| predicted protein [Populus trichocarpa]
gi|222852285|gb|EEE89832.1| predicted protein [Populus trichocarpa]
Length = 639
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/580 (88%), Positives = 538/580 (92%), Gaps = 1/580 (0%)
Query: 46 GLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRR 105
GL FYPT PTSFVV+DA + DFPIIYVNKVF+ FTGY+A EVLG NCRFLQYRDP AQRR
Sbjct: 59 GLFFYPTNPTSFVVSDALELDFPIIYVNKVFQNFTGYQAHEVLGHNCRFLQYRDPHAQRR 118
Query: 106 HPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
HPLVDP VVSEIRRCLEEG+EFQGELLNF+KDGTPLVNRLRL PI DDDG +THII IQ+
Sbjct: 119 HPLVDPDVVSEIRRCLEEGVEFQGELLNFRKDGTPLVNRLRLVPIHDDDGAITHIIAIQV 178
Query: 166 FSEAKIDLNHVSYPVFKENCNQQYDQSAQY-FSGGHSPLSQHQDICGILQLSDEVLAHNI 224
FSEAKIDLNHVSYPVFKE CNQ DQSA Y G S + H +ICGILQLSDEVLAHNI
Sbjct: 179 FSEAKIDLNHVSYPVFKETCNQLSDQSANYSLPRGQSTFTGHPEICGILQLSDEVLAHNI 238
Query: 225 LSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARE 284
LSRLTPRDVASI SVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARE
Sbjct: 239 LSRLTPRDVASIASVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARE 298
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
LTTLEAV WRK TV GAVEPSRCNFSACA GNRLVLFGGEGVNMQPMDDTFVLNLDAANP
Sbjct: 299 LTTLEAVRWRKLTVGGAVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 358
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
EW+R+SVKSSPPGRWGHTLS LNGS LVVFGGCGRQGLLNDVFVLDLDAKQPTW EVSGG
Sbjct: 359 EWQRISVKSSPPGRWGHTLSCLNGSCLVVFGGCGRQGLLNDVFVLDLDAKQPTWKEVSGG 418
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
PPLPRSWHSSC IEGSKLVVSGGCTDAGVLLSDTY+LDLTTDKPMWREI TSW+PPSRL
Sbjct: 419 TPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYMLDLTTDKPMWREIRTSWAPPSRL 478
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
GHSLSVY RTK+LMFGGLA SGHLRLRSGE+YTIDL DEEPQW+QLEC+A TG+GSQS+
Sbjct: 479 GHSLSVYDRTKILMFGGLANSGHLRLRSGEAYTIDLEDEEPQWRQLECSALTGIGSQSSD 538
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 584
VPPPRLDHVAVSMPCGRI+IFGGSIAGLHSPSQLFLLDP+EEKPSWRILNVPGQPPKFAW
Sbjct: 539 VPPPRLDHVAVSMPCGRILIFGGSIAGLHSPSQLFLLDPAEEKPSWRILNVPGQPPKFAW 598
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDSD 624
GHSTCVVGGTRVLVLGGHTGEEW+LNELHELCLAS+QDS+
Sbjct: 599 GHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSE 638
>gi|375126879|gb|AFA35966.1| flavin-binding, kelch repeat, f-box 1/adagio3 [Nicotiana attenuata]
Length = 629
Score = 1058 bits (2736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/625 (83%), Positives = 551/625 (88%), Gaps = 19/625 (3%)
Query: 19 GSGKRQKCSFEGGGGGGGDDTE-----------------LSLKPGLLFYP-TTPTSFVVA 60
G GKR KCS D+ E S +P FYP TTP+S VV+
Sbjct: 4 GGGKRLKCSRNDNNNMDQDEEEEIFYDGYEVERENEQLPSSQQPVGFFYPSTTPSSIVVS 63
Query: 61 DAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRC 120
DA +PD PIIYVN VFEI TGYRADEVLGRNCRFLQ+RDPRAQRRHPLVDPVVVSEIRRC
Sbjct: 64 DALEPDLPIIYVNTVFEISTGYRADEVLGRNCRFLQFRDPRAQRRHPLVDPVVVSEIRRC 123
Query: 121 LEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPV 180
LEEG+EFQGELLNF+KDGTPLVNRLRLAPI DDGTVTH+IGIQ+FSEAKIDLN VSYPV
Sbjct: 124 LEEGVEFQGELLNFRKDGTPLVNRLRLAPIHGDDGTVTHVIGIQVFSEAKIDLNTVSYPV 183
Query: 181 FKENCNQQYDQSAQY-FSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSV 239
FKE C Q D+S++Y G QH++ICGILQLSDEVLAHNILSRLTPRDVASIGSV
Sbjct: 184 FKETCQPQCDKSSKYSIKSGDLLQCQHREICGILQLSDEVLAHNILSRLTPRDVASIGSV 243
Query: 240 CRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKFTVR 299
CRRIRQLTKNEHVRKMVCQNAWG +VTG LE MTK+L WGRLARELTTLEAVCW+K TV
Sbjct: 244 CRRIRQLTKNEHVRKMVCQNAWGADVTGVLEHMTKRLAWGRLARELTTLEAVCWKKLTVG 303
Query: 300 GAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRW 359
GAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRW
Sbjct: 304 GAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRW 363
Query: 360 GHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIE 419
GHTLS LNGSWLVVFGGCGR+GLLNDVFVLDLDAKQPTW EVSGG PPLPRSWHSSC +E
Sbjct: 364 GHTLSCLNGSWLVVFGGCGREGLLNDVFVLDLDAKQPTWKEVSGGTPPLPRSWHSSCTME 423
Query: 420 GSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMF 479
GSKLVVSGGCTDAGVLLSDTYLLDLT DKP WREIPT+W+PPSRLGHSLS YG+TK+LMF
Sbjct: 424 GSKLVVSGGCTDAGVLLSDTYLLDLTIDKPTWREIPTTWAPPSRLGHSLSAYGKTKILMF 483
Query: 480 GGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPC 539
GGLAKSGHLRLRSGESYTIDL DE PQW+QL+C AFTGVGSQ+AV+PPPRLDHVAV+MPC
Sbjct: 484 GGLAKSGHLRLRSGESYTIDLEDERPQWRQLDCGAFTGVGSQNAVIPPPRLDHVAVTMPC 543
Query: 540 GRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVL 599
GRIIIFGGSIAGLHSPSQLFLLDPSEEKP WR LNVPGQPPKFAWGHSTCVVGGTRVLVL
Sbjct: 544 GRIIIFGGSIAGLHSPSQLFLLDPSEEKPLWRTLNVPGQPPKFAWGHSTCVVGGTRVLVL 603
Query: 600 GGHTGEEWVLNELHELCLASKQDSD 624
GGHTGEEW+LNE++ELCLASKQDSD
Sbjct: 604 GGHTGEEWILNEVYELCLASKQDSD 628
>gi|225424384|ref|XP_002281284.1| PREDICTED: adagio protein 3-like [Vitis vinifera]
Length = 610
Score = 1053 bits (2723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/581 (88%), Positives = 535/581 (92%), Gaps = 7/581 (1%)
Query: 46 GLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRR 105
G FYPT P++FVV+D + DFPIIYVN VFE TGYRADEVLGRN DPRAQRR
Sbjct: 36 GSFFYPTVPSAFVVSDVLETDFPIIYVNSVFETSTGYRADEVLGRNW------DPRAQRR 89
Query: 106 HPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
HPLVDPVVVSEIRRCLEEGIEFQGELLNF+KDGTPLVN+LRLAPI DDDG VTHIIGIQ+
Sbjct: 90 HPLVDPVVVSEIRRCLEEGIEFQGELLNFRKDGTPLVNQLRLAPIHDDDGVVTHIIGIQV 149
Query: 166 FSEAKIDLNHVSYPVFKENCNQQYDQSAQYFS-GGHSPLSQHQDICGILQLSDEVLAHNI 224
FSEAKIDLNHVSYPVFKE DQS Y GG + +QHQ+ICG LQLSDEVLAHNI
Sbjct: 150 FSEAKIDLNHVSYPVFKETGYPHVDQSGNYSPVGGQAQHAQHQEICGFLQLSDEVLAHNI 209
Query: 225 LSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARE 284
LSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQN+WGREVTG LELMTKKLGWGRLARE
Sbjct: 210 LSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNSWGREVTGTLELMTKKLGWGRLARE 269
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
LTTLEAVCW+K TV GAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP
Sbjct: 270 LTTLEAVCWKKMTVGGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 329
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
EWR+VSVKSSPPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVFVLDLDAK PTW EV GG
Sbjct: 330 EWRQVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAKHPTWKEVFGG 389
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
PPLPRSWHSSC IEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSW+PPSRL
Sbjct: 390 TPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWAPPSRL 449
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
GHSLSVYGRTK+LMFGGLAKSGHLRLRSGE+YTIDL DE P W+QLEC+ FTG+GSQSAV
Sbjct: 450 GHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDERPHWRQLECSGFTGIGSQSAV 509
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 584
VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW
Sbjct: 510 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 569
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDSDQ 625
GHSTCVVGGTRVLVLGGHTGEEW+LNELHELCLAS+QDSDQ
Sbjct: 570 GHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSDQ 610
>gi|297841519|ref|XP_002888641.1| flavin-binding kelch domain F box protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334482|gb|EFH64900.1| flavin-binding kelch domain F box protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 1033 bits (2670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/626 (80%), Positives = 551/626 (88%), Gaps = 18/626 (2%)
Query: 1 MTSKKDKEEEEEGEGVIQGSGKRQKCSFEGGGGGGGDDTELSLKPGLLFYPTTPTSFVVA 60
+T K+ K + E EG I + Q +D +L L+ G+++YP TP SF+V+
Sbjct: 13 VTGKRKKRDRVEEEGDIYDGIENQDVV---------EDGKLPLEVGMVYYPVTPPSFIVS 63
Query: 61 DAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRC 120
DA +PDFP+IYVNKVFE+FTGY ADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRC
Sbjct: 64 DALEPDFPLIYVNKVFEVFTGYHADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRC 123
Query: 121 LEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPV 180
LEEGIEFQGELLNF+KDGTPLVNRLRLA IRDDDGTVTH+IGIQ+FSE IDL+ VSYPV
Sbjct: 124 LEEGIEFQGELLNFRKDGTPLVNRLRLALIRDDDGTVTHVIGIQVFSETTIDLDRVSYPV 183
Query: 181 FKENCNQQYDQSAQYFSGGHSPL--SQHQDICGILQLSDEVLAHNILSRLTPRDVASIGS 238
FK QQ DQ+++ G SP H+D CGILQ+SDEVLAHNILSRLTPRDVASIGS
Sbjct: 184 FKHK--QQLDQTSECLLPGGSPRFKEHHEDFCGILQMSDEVLAHNILSRLTPRDVASIGS 241
Query: 239 VCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKFTV 298
CRR+RQLTKNE VRKMVCQNAWG+E+TG LE+MTKKLGWGRLARELTTLEAVCWRKFTV
Sbjct: 242 ACRRLRQLTKNESVRKMVCQNAWGKEITGTLEIMTKKLGWGRLARELTTLEAVCWRKFTV 301
Query: 299 RGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGR 358
G V+PSRCNFSACA GNRLVLFGGEGVNMQP+DDTFVLNLDA PEW+RV V SSPPGR
Sbjct: 302 GGIVQPSRCNFSACAVGNRLVLFGGEGVNMQPLDDTFVLNLDAEYPEWQRVRVTSSPPGR 361
Query: 359 WGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCII 418
WGHTLS LNGSWLVVFGGCGRQGLLNDVFVLDLDAK PTW EV+GG PPLPRSWHSSC I
Sbjct: 362 WGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAKHPTWKEVAGGTPPLPRSWHSSCTI 421
Query: 419 EGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLM 478
EGSKLVVSGGCTDAGVLLSDT+LLDLTTDKP W+EIPTSW+PPSRLGHSLSV+GRTK+LM
Sbjct: 422 EGSKLVVSGGCTDAGVLLSDTFLLDLTTDKPTWKEIPTSWAPPSRLGHSLSVFGRTKILM 481
Query: 479 FGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMP 538
FGGLA SGHL+LRSGE+YTIDL DEEP+W++LEC++FTG AVVPPPRLDHVAVSMP
Sbjct: 482 FGGLANSGHLKLRSGEAYTIDLEDEEPRWRELECSSFTG-----AVVPPPRLDHVAVSMP 536
Query: 539 CGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLV 598
CGR+IIFGGSIAGLHSPSQLFL+DP+EEKPSWRILNVPG+PPK AWGHSTCVVGGTRVLV
Sbjct: 537 CGRVIIFGGSIAGLHSPSQLFLIDPAEEKPSWRILNVPGKPPKLAWGHSTCVVGGTRVLV 596
Query: 599 LGGHTGEEWVLNELHELCLASKQDSD 624
LGGHTGEEW+LNELHELCLAS+QDSD
Sbjct: 597 LGGHTGEEWILNELHELCLASRQDSD 622
>gi|18408929|ref|NP_564919.1| adagio protein 3 [Arabidopsis thaliana]
gi|75169796|sp|Q9C9W9.1|ADO3_ARATH RecName: Full=Adagio protein 3; AltName: Full=F-box only protein
2a; Short=FBX2a; AltName: Full=Flavin-binding kelch
repeat F-box protein 1
gi|12324066|gb|AAG51994.1|AC012563_4 unknown protein; 35653-33693 [Arabidopsis thaliana]
gi|18086374|gb|AAL57647.1| At1g68050/T23K23_10 [Arabidopsis thaliana]
gi|21360443|gb|AAM47337.1| At1g68050/T23K23_10 [Arabidopsis thaliana]
gi|332196620|gb|AEE34741.1| adagio protein 3 [Arabidopsis thaliana]
Length = 619
Score = 1027 bits (2656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/590 (83%), Positives = 537/590 (91%), Gaps = 9/590 (1%)
Query: 37 DDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ 96
+D +L L+ G+ +YP TP SF+V+DA +PDFP+IYVN+VFE+FTGYRADEVLGRNCRFLQ
Sbjct: 36 EDEKLPLEVGMFYYPMTPPSFIVSDALEPDFPLIYVNRVFEVFTGYRADEVLGRNCRFLQ 95
Query: 97 YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGT 156
YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNF+KDGTPLVNRLRLAPIRDDDGT
Sbjct: 96 YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIRDDDGT 155
Query: 157 VTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPL--SQHQDICGILQ 214
+TH+IGIQ+FSE IDL+ VSYPVFK QQ DQ+++ SP H+D CGILQ
Sbjct: 156 ITHVIGIQVFSETTIDLDRVSYPVFKHK--QQLDQTSECLFPSGSPRFKEHHEDFCGILQ 213
Query: 215 LSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTK 274
LSDEVLAHNILSRLTPRDVASIGS CRR+RQLTKNE VRKMVCQNAWG+E+TG LE+MTK
Sbjct: 214 LSDEVLAHNILSRLTPRDVASIGSACRRLRQLTKNESVRKMVCQNAWGKEITGTLEIMTK 273
Query: 275 KLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDT 334
KL WGRLARELTTLEAVCWRKFTV G V+PSRCNFSACA GNRLVLFGGEGVNMQP+DDT
Sbjct: 274 KLRWGRLARELTTLEAVCWRKFTVGGIVQPSRCNFSACAVGNRLVLFGGEGVNMQPLDDT 333
Query: 335 FVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAK 394
FVLNLDA PEW+RV V SSPPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVFVLDLDAK
Sbjct: 334 FVLNLDAECPEWQRVRVTSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAK 393
Query: 395 QPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI 454
PTW EV+GG PPLPRSWHSSC IEGSKLVVSGGCTDAGVLLSDT+LLDLTTDKP W+EI
Sbjct: 394 HPTWKEVAGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTFLLDLTTDKPTWKEI 453
Query: 455 PTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNA 514
PTSW+PPSRLGHSLSV+GRTK+LMFGGLA SGHL+LRSGE+YTIDL DEEP+W++LEC+A
Sbjct: 454 PTSWAPPSRLGHSLSVFGRTKILMFGGLANSGHLKLRSGEAYTIDLEDEEPRWRELECSA 513
Query: 515 FTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILN 574
F GV VVPPPRLDHVAVSMPCGR+IIFGGSIAGLHSPSQLFL+DP+EEKPSWRILN
Sbjct: 514 FPGV-----VVPPPRLDHVAVSMPCGRVIIFGGSIAGLHSPSQLFLIDPAEEKPSWRILN 568
Query: 575 VPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDSD 624
VPG+PPK AWGHSTCVVGGTRVLVLGGHTGEEW+LNELHELCLAS+QDSD
Sbjct: 569 VPGKPPKLAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSD 618
>gi|6960305|gb|AAF32298.2|AF216523_1 FKF1 [Arabidopsis thaliana]
gi|13487072|gb|AAK27435.1|AF252296_1 Adagio 3 [Arabidopsis thaliana]
Length = 619
Score = 1024 bits (2647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/590 (83%), Positives = 536/590 (90%), Gaps = 9/590 (1%)
Query: 37 DDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ 96
+D +L L+ G+ +YP TP SF+V+DA +PDFP+IYVN+VFE+FTGYRADEVLGRNCRFLQ
Sbjct: 36 EDEKLPLEVGMFYYPMTPPSFIVSDALEPDFPLIYVNRVFEVFTGYRADEVLGRNCRFLQ 95
Query: 97 YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGT 156
YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNF+KDGTPLVNRLRLAPIRDDDGT
Sbjct: 96 YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIRDDDGT 155
Query: 157 VTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPL--SQHQDICGILQ 214
+TH+IGIQ+FSE IDL+ VSYPVFK QQ DQ+++ SP H+D CGILQ
Sbjct: 156 ITHVIGIQVFSETTIDLDRVSYPVFKHK--QQLDQTSECLFPSGSPRFKEHHEDFCGILQ 213
Query: 215 LSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTK 274
LSDEVLAHNILSRLTPRDVASIGS CRR+RQLTKNE VRKMVCQNAWG+E+TG LE+MTK
Sbjct: 214 LSDEVLAHNILSRLTPRDVASIGSACRRLRQLTKNESVRKMVCQNAWGKEITGTLEIMTK 273
Query: 275 KLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDT 334
KL WGRLARELTTLEAVCWRKFTV G V+PSRCNFSACA GNRLVLFGGEGVNMQP+DDT
Sbjct: 274 KLRWGRLARELTTLEAVCWRKFTVGGIVQPSRCNFSACAVGNRLVLFGGEGVNMQPLDDT 333
Query: 335 FVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAK 394
FVLNLDA PEW+RV V SSPPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVFVLDLDAK
Sbjct: 334 FVLNLDAECPEWQRVRVTSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAK 393
Query: 395 QPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI 454
PTW EV+GG PPLPRSWHSSC IEGSKLVVSGGCTDAGVLLSDT+LLDLTTDKP W+EI
Sbjct: 394 HPTWKEVAGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTFLLDLTTDKPTWKEI 453
Query: 455 PTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNA 514
PTSW+PPSRLGHSLSV+GRTK+LMFGGLA GHL+LRSGE+YTIDL DEEP+W++LEC+A
Sbjct: 454 PTSWAPPSRLGHSLSVFGRTKILMFGGLANIGHLKLRSGEAYTIDLEDEEPRWRELECSA 513
Query: 515 FTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILN 574
F GV VVPPPRLDHVAVSMPCGR+IIFGGSIAGLHSPSQLFL+DP+EEKPSWRILN
Sbjct: 514 FPGV-----VVPPPRLDHVAVSMPCGRVIIFGGSIAGLHSPSQLFLIDPAEEKPSWRILN 568
Query: 575 VPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDSD 624
VPG+PPK AWGH+TCVVGGTRVLVLGGHTGEEW+LNELHELCLAS+QDSD
Sbjct: 569 VPGKPPKLAWGHNTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSD 618
>gi|309256355|gb|ADO61005.1| flavin-binding kelch repeat F-box 1 [Helianthus annuus]
Length = 580
Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/586 (83%), Positives = 523/586 (89%), Gaps = 9/586 (1%)
Query: 37 DDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ 96
DD L+ G P PTS VV+DA +PDFP+IYVNKVFE TGYRADEVLGRNCRFLQ
Sbjct: 2 DDDSSGLRLGDFLNPMIPTSIVVSDAMEPDFPVIYVNKVFEYVTGYRADEVLGRNCRFLQ 61
Query: 97 YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGT 156
YRDPRAQRRHPLVDPV VSEIR CL+EGI FQGELLNF+KDGTPLVNRLRL PI DDG
Sbjct: 62 YRDPRAQRRHPLVDPVCVSEIRTCLDEGIHFQGELLNFRKDGTPLVNRLRLTPIHGDDGV 121
Query: 157 VTHIIGIQIFSEAKIDLNHVSYPVFKENC-NQQYDQSAQYFSGGHSPLSQHQDICGILQL 215
+THIIGIQ+F+E KIDLN VSYPVFKE NQ + ++Y G ++CGILQL
Sbjct: 122 ITHIIGIQVFTETKIDLNSVSYPVFKETASNQPTARESEYTEG--------PEMCGILQL 173
Query: 216 SDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKK 275
SD+V+A NILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVT ALE MT K
Sbjct: 174 SDDVMAQNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTCALERMTNK 233
Query: 276 LGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTF 335
LGWGRLARELTTLEAVCW+K V GAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTF
Sbjct: 234 LGWGRLARELTTLEAVCWKKLRVGGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTF 293
Query: 336 VLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQ 395
VLNLDA NPEWR+V VKS+PPGRWGHTL+ LNGSWLVVFGGCG+QG+LNDVFVLDLDAKQ
Sbjct: 294 VLNLDAVNPEWRQVRVKSAPPGRWGHTLTCLNGSWLVVFGGCGKQGMLNDVFVLDLDAKQ 353
Query: 396 PTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP 455
PTWIEV GG PP PRSWHSSC IEGSKLVVSGGCT AGVLL+DT+LLDLT +KP+WREIP
Sbjct: 354 PTWIEVYGGGPPPPRSWHSSCTIEGSKLVVSGGCTAAGVLLNDTFLLDLTMEKPVWREIP 413
Query: 456 TSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAF 515
TSW PPSRLGHSLSVYGRTK+LMFGGLAKSGHLRLRS E+YTIDL DE+PQW+ LECNAF
Sbjct: 414 TSWVPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSSEAYTIDLVDEKPQWRVLECNAF 473
Query: 516 TGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNV 575
TGVG+QSAVVPPPRLDHVA+SMPCGR+IIFGGSIAGLHSPSQ+FLL PSEEKPSWRILNV
Sbjct: 474 TGVGTQSAVVPPPRLDHVAMSMPCGRVIIFGGSIAGLHSPSQVFLLVPSEEKPSWRILNV 533
Query: 576 PGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
PG+PPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS+Q
Sbjct: 534 PGEPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASRQ 579
>gi|309256357|gb|ADO61006.1| flavin-binding kelch repeat F-box 1 [Helianthus annuus]
Length = 580
Score = 996 bits (2575), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/586 (83%), Positives = 524/586 (89%), Gaps = 9/586 (1%)
Query: 37 DDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ 96
DD L+ G P PTS VV+DA +PDFP+IYVNKVFE TGYRADEVLGRNCRFLQ
Sbjct: 2 DDDSSGLRLGDFLNPMIPTSIVVSDAMEPDFPVIYVNKVFESVTGYRADEVLGRNCRFLQ 61
Query: 97 YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGT 156
YRDPRAQRRHPLVDPV VSEIR CL+EGI FQGELLNF+KDGTPLVNRLRL PI DDG
Sbjct: 62 YRDPRAQRRHPLVDPVCVSEIRTCLDEGIHFQGELLNFRKDGTPLVNRLRLTPIHGDDGV 121
Query: 157 VTHIIGIQIFSEAKIDLNHVSYPVFKENC-NQQYDQSAQYFSGGHSPLSQHQDICGILQL 215
+THIIGIQ+F+E KIDLN VSYPVFKE NQ + ++Y G ++CGILQL
Sbjct: 122 ITHIIGIQVFTETKIDLNSVSYPVFKETASNQPTXRESEYTEG--------XEMCGILQL 173
Query: 216 SDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKK 275
SD+V+A NILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVT ALE MT K
Sbjct: 174 SDDVMAQNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTCALERMTNK 233
Query: 276 LGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTF 335
LGWGRLARELTTLEAVCW+K V GAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTF
Sbjct: 234 LGWGRLARELTTLEAVCWKKLRVGGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTF 293
Query: 336 VLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQ 395
VLNLDA NPEWR+V VKS+PPGRWGHTL+ LNGSWLVVFGGCG+QG+LNDVFVLDLDAKQ
Sbjct: 294 VLNLDAVNPEWRQVRVKSAPPGRWGHTLTCLNGSWLVVFGGCGKQGMLNDVFVLDLDAKQ 353
Query: 396 PTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP 455
PTWIEV GG PP PRSWHSSC IEGSKLVVSGGCT AGVLL+DT+LLDLT +KP+WREIP
Sbjct: 354 PTWIEVXGGGPPPPRSWHSSCTIEGSKLVVSGGCTAAGVLLNDTFLLDLTMEKPVWREIP 413
Query: 456 TSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAF 515
TSW PPSRLGHSLSVYGRTK+LMFGGLAKSGHLRLRS E+YTIDL DE+PQW+ LECNAF
Sbjct: 414 TSWVPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSSEAYTIDLVDEKPQWRVLECNAF 473
Query: 516 TGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNV 575
TGVG+QSAVVPPPRLDHVA+SMPCGR+IIFGGSIAGLHSPSQ+FLLDPSEEKPSWRILNV
Sbjct: 474 TGVGTQSAVVPPPRLDHVAMSMPCGRVIIFGGSIAGLHSPSQVFLLDPSEEKPSWRILNV 533
Query: 576 PGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
PG+PPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS+Q
Sbjct: 534 PGEPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASRQ 579
>gi|327342166|gb|AEA50870.1| fkf1b [Populus tremula]
Length = 532
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/531 (90%), Positives = 503/531 (94%), Gaps = 1/531 (0%)
Query: 95 LQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDD 154
LQYRDP AQRRHPLVDPVVVSEIRRCLEEG+EFQGELLNF+KDGTPLVNRLRL PI DDD
Sbjct: 1 LQYRDPHAQRRHPLVDPVVVSEIRRCLEEGVEFQGELLNFRKDGTPLVNRLRLVPIHDDD 60
Query: 155 GTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQY-FSGGHSPLSQHQDICGIL 213
G +THIIGIQ+FSEAKIDLNHVSYPVFKE CNQ DQSA Y G S + H +ICGIL
Sbjct: 61 GAITHIIGIQVFSEAKIDLNHVSYPVFKETCNQLSDQSANYSLPRGQSTFTGHPEICGIL 120
Query: 214 QLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMT 273
QLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLT+NEHVRKMVCQNAWGREVTGALELMT
Sbjct: 121 QLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTENEHVRKMVCQNAWGREVTGALELMT 180
Query: 274 KKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDD 333
KKLGWGRLARELTTLEAVCWRKFTV GAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDD
Sbjct: 181 KKLGWGRLARELTTLEAVCWRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDD 240
Query: 334 TFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDA 393
TFVLNLDAANPEW+R+SVKSSPPGRWGHTLS LNGSWLVVFGGCGR+GLLNDVFVLDLDA
Sbjct: 241 TFVLNLDAANPEWQRLSVKSSPPGRWGHTLSCLNGSWLVVFGGCGREGLLNDVFVLDLDA 300
Query: 394 KQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWRE 453
KQPTW EV GG PPLPRSWHSSC IEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWRE
Sbjct: 301 KQPTWKEVFGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWRE 360
Query: 454 IPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECN 513
IPTSW+PPSRLGHSLSVY RTK+LMFGGLA SGHLRLRSGE+YTIDL DE+PQW+QLEC+
Sbjct: 361 IPTSWAPPSRLGHSLSVYDRTKILMFGGLANSGHLRLRSGEAYTIDLEDEKPQWRQLECS 420
Query: 514 AFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRIL 573
A TG+GSQS+ VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP+EEKPSWRIL
Sbjct: 421 ALTGIGSQSSDVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPAEEKPSWRIL 480
Query: 574 NVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDSD 624
NVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEW+LNELHELCLAS+QDS+
Sbjct: 481 NVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSE 531
>gi|449521429|ref|XP_004167732.1| PREDICTED: adagio protein 3-like [Cucumis sativus]
Length = 556
Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/535 (89%), Positives = 505/535 (94%), Gaps = 5/535 (0%)
Query: 93 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRD 152
RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEG+EFQGELLNF+KDGTP+VNRLRLAPI D
Sbjct: 23 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGVEFQGELLNFRKDGTPMVNRLRLAPIHD 82
Query: 153 DDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYD---QSAQYFSGGHSPLSQHQDI 209
DDGTVTHIIGIQ+FSE KIDLN +SYPVFKENC +YD +SA SP H++I
Sbjct: 83 DDGTVTHIIGIQVFSETKIDLNRLSYPVFKENCAIKYDLSGKSAHLID--QSPFGHHKEI 140
Query: 210 CGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGAL 269
CGILQLSDEVLAHNILSRLTPRDVAS+GSVCRRIRQLTKNEH+RKMVCQNAWGREVTG L
Sbjct: 141 CGILQLSDEVLAHNILSRLTPRDVASVGSVCRRIRQLTKNEHLRKMVCQNAWGREVTGTL 200
Query: 270 ELMTKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQ 329
E MTKKLGWGRLARELTTLEAVCWRK TV GAVEP RCNFSACAAGNRLVLFGGEGVNMQ
Sbjct: 201 EQMTKKLGWGRLARELTTLEAVCWRKMTVGGAVEPLRCNFSACAAGNRLVLFGGEGVNMQ 260
Query: 330 PMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVL 389
PMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLS LNGSWLVVFGGCG QGLLNDVFVL
Sbjct: 261 PMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGSQGLLNDVFVL 320
Query: 390 DLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKP 449
DLDA+QPTW E+SGGAPPLPRSWHSSC+IEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKP
Sbjct: 321 DLDAQQPTWKEISGGAPPLPRSWHSSCMIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKP 380
Query: 450 MWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQ 509
WREIPTS +PPSRLGHSLSVYGRTK+LMFGGLAKSGHLRLRSGE+YTIDL +EEPQW+Q
Sbjct: 381 TWREIPTSGTPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEEEEPQWRQ 440
Query: 510 LECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPS 569
LEC+AFTG+G QSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP+EEKPS
Sbjct: 441 LECSAFTGIGGQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPAEEKPS 500
Query: 570 WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDSD 624
WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEW+LNELHELCLAS+QDSD
Sbjct: 501 WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSD 555
>gi|327342164|gb|AEA50869.1| fkf1a [Populus tremula]
Length = 532
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/531 (89%), Positives = 500/531 (94%), Gaps = 1/531 (0%)
Query: 95 LQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDD 154
LQYRDPRAQRRHPLVDPVVVSEIRRCLEEG+EFQGELLNF+KDGTPLVNRLRL PI DDD
Sbjct: 1 LQYRDPRAQRRHPLVDPVVVSEIRRCLEEGMEFQGELLNFRKDGTPLVNRLRLVPIHDDD 60
Query: 155 GTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYF-SGGHSPLSQHQDICGIL 213
G +T +IGIQ+FSEAKIDLNHVSYPV+KE C Q+ D A Y G SP +QHQ+ICGIL
Sbjct: 61 GIITQVIGIQVFSEAKIDLNHVSYPVYKETCIQRSDHLANYSPRHGQSPFTQHQEICGIL 120
Query: 214 QLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMT 273
QLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNE VRKMVCQNAWGREVTGALELMT
Sbjct: 121 QLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEQVRKMVCQNAWGREVTGALELMT 180
Query: 274 KKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDD 333
KKLGWGRLARELTTLEAVCWRK TV GAVEPSRCNFSACA GNRLVLFGGEGVNMQPMDD
Sbjct: 181 KKLGWGRLARELTTLEAVCWRKVTVGGAVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDD 240
Query: 334 TFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDA 393
TFVLNLDAANPEW+R+SVKSSPPGRWGHTLS LNGSWLVVFGGCG+QGLLNDVFVLDLDA
Sbjct: 241 TFVLNLDAANPEWQRISVKSSPPGRWGHTLSCLNGSWLVVFGGCGKQGLLNDVFVLDLDA 300
Query: 394 KQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWRE 453
KQPTW EVSGG PPLPRSWHSSC IEGSKLVVSGGCTDAGVLLSDTYLLDLT DKP+WRE
Sbjct: 301 KQPTWKEVSGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDKPIWRE 360
Query: 454 IPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECN 513
I TSW+PPSRLGHSLSVYGRTK+LMFGGLAKSGHLRLRSGE+YTIDL DEEP W+QLEC+
Sbjct: 361 ILTSWAPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEEPHWRQLECS 420
Query: 514 AFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRIL 573
A TG+GSQS+ VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP+EEKPSWRIL
Sbjct: 421 ALTGIGSQSSAVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPAEEKPSWRIL 480
Query: 574 NVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDSD 624
NVPGQPPK AWGHSTCVVGGTRVLVLGGHTGEEW+LNELHELCLAS+QDS+
Sbjct: 481 NVPGQPPKLAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSE 531
>gi|34499885|gb|AAQ73528.1| FKF1 [Mesembryanthemum crystallinum]
Length = 634
Score = 978 bits (2528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/581 (80%), Positives = 514/581 (88%), Gaps = 9/581 (1%)
Query: 48 LFYPT---TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR 104
+YP P+S VV DA + D+PIIYVN FEIFTGYRA+E LGRNCRFLQY DP AQR
Sbjct: 58 FYYPQPVLAPSSIVVCDALEADYPIIYVNTSFEIFTGYRANEALGRNCRFLQYMDPHAQR 117
Query: 105 RHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
RHPLVDPV+VSE+RRCLEE ++F+GELLNFKKDGTPLVNRLRL PI DDGT+TH+IGIQ
Sbjct: 118 RHPLVDPVMVSEMRRCLEEAVQFEGELLNFKKDGTPLVNRLRLQPIHADDGTITHVIGIQ 177
Query: 165 IFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNI 224
IFSEAK++LNHVSYPV+KE C+ Q+D + P D CGILQLSDEVLAHNI
Sbjct: 178 IFSEAKVNLNHVSYPVYKEKCDHQFD-----CADDDHPTKDGGDFCGILQLSDEVLAHNI 232
Query: 225 LSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARE 284
LSRLTPRDVASIGSVCRRI QLTKNE VRKMVCQN WGREV G LELMTKKLGW RLARE
Sbjct: 233 LSRLTPRDVASIGSVCRRIYQLTKNELVRKMVCQNLWGREVIGNLELMTKKLGWVRLARE 292
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
LTTLEAV WRKFTV GAVEPSRCNFSACAAGNRLVLFGGEGV+MQPMDDTFVLNLDA +P
Sbjct: 293 LTTLEAVRWRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAEHP 352
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
EWRRVSVKSSPPGRWGHTLS LNGSWLVVFGGCG+QGLLNDVFV+DLDAKQPTW E+ GG
Sbjct: 353 EWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGKQGLLNDVFVIDLDAKQPTWTEIPGG 412
Query: 405 A-PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSR 463
+ PP+PRSWHSSC I+GSKLVVSGGC+D+GVLLSDT+LLDL T+ P WREIPTSW+PPSR
Sbjct: 413 STPPVPRSWHSSCTIDGSKLVVSGGCSDSGVLLSDTHLLDLMTNTPAWREIPTSWAPPSR 472
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSA 523
LGHSL+VYG+T + MFGGL KSG LRLRSGE+YTID+G++ P+W+QLEC A G G+Q
Sbjct: 473 LGHSLTVYGKTNIFMFGGLVKSGQLRLRSGEAYTIDIGNDNPRWRQLECGAHAGGGTQGG 532
Query: 524 VVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFA 583
VVPPPRLDHVAVSMPCGRIIIFGGSIAGLHS SQ+FL+DPSEEKPSWRI+NVPGQPPKFA
Sbjct: 533 VVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSSSQIFLIDPSEEKPSWRIINVPGQPPKFA 592
Query: 584 WGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDSD 624
WGHSTCVVGGTRVLVLGGHTGEEW+LNELHELCLASK DSD
Sbjct: 593 WGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASKHDSD 633
>gi|242071271|ref|XP_002450912.1| hypothetical protein SORBIDRAFT_05g021030 [Sorghum bicolor]
gi|241936755|gb|EES09900.1| hypothetical protein SORBIDRAFT_05g021030 [Sorghum bicolor]
Length = 619
Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/570 (77%), Positives = 491/570 (86%), Gaps = 6/570 (1%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
+ VVADA + DFP+IYVN FE TGYRA EVLGRNCRFLQ+RDPRAQRRHPLVDP+VV
Sbjct: 54 AAIVVADASEVDFPVIYVNAAFEAATGYRAHEVLGRNCRFLQFRDPRAQRRHPLVDPMVV 113
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLN 174
SEIRRCL EGIEFQGELLNF+KDG PL NRLRL P+ DDG VTH+IGIQ+FS+A IDL+
Sbjct: 114 SEIRRCLNEGIEFQGELLNFRKDGAPLYNRLRLIPMHGDDGYVTHVIGIQLFSDANIDLS 173
Query: 175 HVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVA 234
VSYPV+K+ N+ Q S H+P Q D C I QLSDEVLAHNILSRL+PRDVA
Sbjct: 174 SVSYPVYKQQSNRLSIQDLNSASHEHAPKIQSSDHCAIFQLSDEVLAHNILSRLSPRDVA 233
Query: 235 SIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWR 294
SIGSVC R+ +LTKN H+RKMVCQNAWGR+VT LE+ TK +GWGRLARELTTLEA WR
Sbjct: 234 SIGSVCTRMHELTKNNHLRKMVCQNAWGRDVTVRLEMSTKMVGWGRLARELTTLEAASWR 293
Query: 295 KFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSS 354
KFTV G VEPSRCNFSACA GNRLVLFGGEGVNMQPMDDTFVLNL+AA PEWRRV V +S
Sbjct: 294 KFTVGGRVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLEAARPEWRRVKVSAS 353
Query: 355 PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHS 414
PPGRWGHTLS LNGSWLVVFGGCG+QGLLNDVFVLDLDA+QPTW EV+ APPLPRSWHS
Sbjct: 354 PPGRWGHTLSWLNGSWLVVFGGCGQQGLLNDVFVLDLDAQQPTWREVASEAPPLPRSWHS 413
Query: 415 SCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRT 474
SC ++GSKLVVSGGCT++GVLLSDT+LLDLT +KP WREIPTSWSPPSRLGH++SVYG T
Sbjct: 414 SCTLDGSKLVVSGGCTESGVLLSDTFLLDLTKEKPAWREIPTSWSPPSRLGHTMSVYGTT 473
Query: 475 KVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVA 534
K+ MFGGLAKSG LRLRS ++Y+ID+ ++ PQW+QL F VG PPPRLDHVA
Sbjct: 474 KLFMFGGLAKSGSLRLRSSDAYSIDVSEDSPQWRQLATTGFPNVG------PPPRLDHVA 527
Query: 535 VSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGT 594
VS+PCGRIIIFGGSIAGLHSP+QLFL+DP+EEKP+WRILNVPGQPPKFAWGHSTCVVGGT
Sbjct: 528 VSLPCGRIIIFGGSIAGLHSPAQLFLIDPAEEKPTWRILNVPGQPPKFAWGHSTCVVGGT 587
Query: 595 RVLVLGGHTGEEWVLNELHELCLASKQDSD 624
RVLVLGGHTGEEW+LNELHELCLAS+ D D
Sbjct: 588 RVLVLGGHTGEEWILNELHELCLASRPDED 617
>gi|297611976|ref|NP_001068068.2| Os11g0547000 [Oryza sativa Japonica Group]
gi|110832734|sp|Q2R2W1.2|ADO3_ORYSJ RecName: Full=Adagio-like protein 3
gi|108864481|gb|ABA94231.2| Adagio 3, putative, expressed [Oryza sativa Japonica Group]
gi|255680164|dbj|BAF28431.2| Os11g0547000 [Oryza sativa Japonica Group]
Length = 630
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/570 (77%), Positives = 495/570 (86%), Gaps = 7/570 (1%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
VV+DA + DFP+IYVN FE TGYRADEVLGRNCRFLQ+RDPRAQRRHPLVDP+VVSE
Sbjct: 67 IVVSDAVEVDFPVIYVNAAFEAATGYRADEVLGRNCRFLQFRDPRAQRRHPLVDPMVVSE 126
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHV 176
IRRCL EGIEFQGELLNF+KDG PL NRLRL P+ DDG VTH+IGIQ+FSEA IDL++V
Sbjct: 127 IRRCLNEGIEFQGELLNFRKDGAPLYNRLRLIPMHGDDGFVTHVIGIQLFSEANIDLSNV 186
Query: 177 SYPVFKENCNQQYD-QSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVAS 235
SYPV+K+ N + + Q S H P Q + C ILQLSDEVLAHNILSRL+PRDVAS
Sbjct: 187 SYPVYKQQSNHRPNIQEINPASHEHIPKIQSSEYCCILQLSDEVLAHNILSRLSPRDVAS 246
Query: 236 IGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRK 295
IGSVC R+ +LTKN+H+RKMVCQNAWGR+VT LE+ TK LGWGRLARELTTLEA WRK
Sbjct: 247 IGSVCTRMHELTKNDHLRKMVCQNAWGRDVTVRLEMSTKMLGWGRLARELTTLEAASWRK 306
Query: 296 FTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSP 355
FTV G VEPSRCNFSACA GNRLVLFGGEGVNMQPMDDTFVLNL++A PEWRRV V +SP
Sbjct: 307 FTVGGRVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLESAKPEWRRVKVSASP 366
Query: 356 PGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSS 415
PGRWGHTLS LNGSWLVVFGGCG+QGLLNDVFVLDLDAKQPTW EV+ PPLPRSWHSS
Sbjct: 367 PGRWGHTLSWLNGSWLVVFGGCGQQGLLNDVFVLDLDAKQPTWREVASEGPPLPRSWHSS 426
Query: 416 CIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTK 475
C ++GSKLVVSGGCT++GVLLSDT+LLDLT +KP W+EIPTSWSPPSRLGH+LSV+G+TK
Sbjct: 427 CTLDGSKLVVSGGCTESGVLLSDTFLLDLTKEKPAWKEIPTSWSPPSRLGHTLSVFGKTK 486
Query: 476 VLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAV 535
+ MFGGLAKSG LRLRS ++YT+D G++ PQW+QL F +G PPPRLDHVAV
Sbjct: 487 LFMFGGLAKSGSLRLRSCDAYTMDAGEDSPQWRQLATTGFPSIG------PPPRLDHVAV 540
Query: 536 SMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTR 595
S+PCGRIIIFGGSIAGLHSPSQLFLLDP+EEKP+WRILNVPGQPPKFAWGHSTCVVGGTR
Sbjct: 541 SLPCGRIIIFGGSIAGLHSPSQLFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCVVGGTR 600
Query: 596 VLVLGGHTGEEWVLNELHELCLASKQDSDQ 625
VLVLGGHTGEEW+LNELHELCLAS+ D D+
Sbjct: 601 VLVLGGHTGEEWILNELHELCLASRPDEDE 630
>gi|226497550|ref|NP_001146157.1| uncharacterized protein LOC100279726 [Zea mays]
gi|224030419|gb|ACN34285.1| unknown [Zea mays]
gi|413925573|gb|AFW65505.1| hypothetical protein ZEAMMB73_076681 [Zea mays]
Length = 618
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/558 (77%), Positives = 485/558 (86%), Gaps = 7/558 (1%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
+PDFP+IYVN FE TGYRA EVLGRNCRFLQ+RDPRAQRRHPLVDP+VVSEIRRCL E
Sbjct: 58 EPDFPVIYVNAAFESATGYRAHEVLGRNCRFLQFRDPRAQRRHPLVDPMVVSEIRRCLNE 117
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKE 183
GIEF GELLNF+KDG PL NRL L P+ DDG VTH+IGIQ+FSEA IDL+ VSYPV+K+
Sbjct: 118 GIEFHGELLNFRKDGAPLYNRLSLIPMHGDDGYVTHVIGIQLFSEANIDLSSVSYPVYKQ 177
Query: 184 NCNQQYD-QSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRR 242
N + Q S H+P Q D CGILQLSDEVLAHNILSRL+PRDVASIGSVC R
Sbjct: 178 QTNNRPSIQDLNSASHEHAPKVQSADHCGILQLSDEVLAHNILSRLSPRDVASIGSVCTR 237
Query: 243 IRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKFTVRGAV 302
+ +LTKN+H+RKMVCQNAWGR+ T LE+ TK +GWGRLARELTTLEA WRKFTV G V
Sbjct: 238 MHELTKNDHLRKMVCQNAWGRDATVKLEMSTKMVGWGRLARELTTLEAASWRKFTVGGRV 297
Query: 303 EPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHT 362
EPSRCNFSACA GNRLVLFGGEGVNMQPMDDTFVLN++AA PEWRRV V +SPPGRWGHT
Sbjct: 298 EPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNMEAARPEWRRVKVSASPPGRWGHT 357
Query: 363 LSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSK 422
LS LNGSWLVVFGGCG+QGLLNDVFVLDLDA+QPTW EV+ PPLPRSWHSSC ++GSK
Sbjct: 358 LSWLNGSWLVVFGGCGQQGLLNDVFVLDLDAQQPTWREVASEGPPLPRSWHSSCTLDGSK 417
Query: 423 LVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGL 482
LVVSGGCT++GVLLSDT+LLDLT +KP WREIPTSWSPPSRLGH++SVYG TK+LMFGGL
Sbjct: 418 LVVSGGCTESGVLLSDTFLLDLTKEKPAWREIPTSWSPPSRLGHTMSVYGTTKLLMFGGL 477
Query: 483 AKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRI 542
AKSG LRLRS ++YT+D+G++ PQW+QL F VG PPPRLDHVAVS+PCGRI
Sbjct: 478 AKSGSLRLRSSDAYTMDVGEDSPQWRQLATTGFPNVG------PPPRLDHVAVSLPCGRI 531
Query: 543 IIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGH 602
IIFGGSIAGLHSP+QLFL+DP+EEKP+WRILNVPG+PPKFAWGHSTCVVGGTRVLVLGGH
Sbjct: 532 IIFGGSIAGLHSPAQLFLVDPAEEKPTWRILNVPGKPPKFAWGHSTCVVGGTRVLVLGGH 591
Query: 603 TGEEWVLNELHELCLASK 620
TGEEW+LNELHELCLAS+
Sbjct: 592 TGEEWILNELHELCLASR 609
>gi|414591530|tpg|DAA42101.1| TPA: hypothetical protein ZEAMMB73_730434 [Zea mays]
Length = 609
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/574 (76%), Positives = 491/574 (85%), Gaps = 6/574 (1%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P + +VADA + DFP+IYVN FE TGYRA EVLGRNCRFLQ+RDP AQRRHPLVDP
Sbjct: 40 TRPAAILVADAAEVDFPVIYVNAAFEAATGYRAHEVLGRNCRFLQFRDPHAQRRHPLVDP 99
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
+VVSEIRRCL EGIEFQGELLNF+KDG PL NRLRL P+ DDG VTH+IGIQ+FSEA I
Sbjct: 100 MVVSEIRRCLSEGIEFQGELLNFRKDGAPLHNRLRLVPMHGDDGYVTHVIGIQLFSEANI 159
Query: 172 DLNHVSYPVFKENCNQQYD-QSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTP 230
DL+ VSYPV+K+ + + Q H+P Q D CG+LQLSDEVLAHNILSRL+P
Sbjct: 160 DLSSVSYPVYKQKSSSRPSIQDLNSSPHEHAPKIQSADHCGMLQLSDEVLAHNILSRLSP 219
Query: 231 RDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEA 290
RDVASIGSVC R+ +LTKN+H+RKMVCQNAWGR+VT LE+ TK +GWGRLARELTTLEA
Sbjct: 220 RDVASIGSVCTRMHELTKNDHLRKMVCQNAWGRDVTVRLEMSTKMVGWGRLARELTTLEA 279
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVS 350
WRKFTV G VEPSRCNFSACA GNRLVLFGGEGVNMQPMDDTFVLNL+AA PEWRRV
Sbjct: 280 ASWRKFTVGGRVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLEAATPEWRRVK 339
Query: 351 VKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
V +SPPGRWGHTLS LNGSWLVVFGGCG+QGLLNDVFVLDLDA+QPTW EV+ PPLPR
Sbjct: 340 VSASPPGRWGHTLSWLNGSWLVVFGGCGQQGLLNDVFVLDLDAQQPTWREVASEGPPLPR 399
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSV 470
SWHSSC ++GSKLVVSGGC ++GVLLSDT+LLDLT +KP WREIPTSWSPPSRLGH+ SV
Sbjct: 400 SWHSSCTLDGSKLVVSGGCAESGVLLSDTFLLDLTKEKPAWREIPTSWSPPSRLGHTTSV 459
Query: 471 YGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRL 530
YG TK+ MFGGLAKSG LRLRS ++YT+D+ ++ PQW+QL TG + V PPPRL
Sbjct: 460 YGATKLFMFGGLAKSGSLRLRSSDAYTVDVSEDSPQWRQLATT--TGFPN---VSPPPRL 514
Query: 531 DHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCV 590
DHVAVS+PCGRIIIFGGSIAGLHSP+QLFL+DP+EEKP WRILNVPGQPPKFAWGHSTCV
Sbjct: 515 DHVAVSLPCGRIIIFGGSIAGLHSPAQLFLIDPAEEKPIWRILNVPGQPPKFAWGHSTCV 574
Query: 591 VGGTRVLVLGGHTGEEWVLNELHELCLASKQDSD 624
VGGTRVLVLGGHTGEEW+LNELHELCLAS+ D D
Sbjct: 575 VGGTRVLVLGGHTGEEWILNELHELCLASRPDED 608
>gi|125577458|gb|EAZ18680.1| hypothetical protein OsJ_34201 [Oryza sativa Japonica Group]
Length = 645
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/585 (75%), Positives = 494/585 (84%), Gaps = 22/585 (3%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRN---------------CRFLQYRDPR 101
VV+DA + DFP+IYVN FE TGYRADEVLGRN RFLQ+RDPR
Sbjct: 67 IVVSDAVEVDFPVIYVNAAFEAATGYRADEVLGRNWLSSGGKVYLLTRKTIRFLQFRDPR 126
Query: 102 AQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHII 161
AQRRHPLVDP+VVSEIRRCL EGIEFQGELLNF+KDG PL NRLRL P+ DDG VTH+I
Sbjct: 127 AQRRHPLVDPMVVSEIRRCLNEGIEFQGELLNFRKDGAPLYNRLRLIPMHGDDGFVTHVI 186
Query: 162 GIQIFSEAKIDLNHVSYPVFKENCNQQYD-QSAQYFSGGHSPLSQHQDICGILQLSDEVL 220
GIQ+FSEA IDL++VSYPV+K+ N + + Q S H P Q + C ILQLSDEVL
Sbjct: 187 GIQLFSEANIDLSNVSYPVYKQQSNHRPNIQEINPASHEHIPKIQSSEYCCILQLSDEVL 246
Query: 221 AHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGR 280
AHNILSRL+PRDVASIGSVC R+ +LTKN+H+RKMVCQNAWGR+VT LE+ TK LGWGR
Sbjct: 247 AHNILSRLSPRDVASIGSVCTRMHELTKNDHLRKMVCQNAWGRDVTVRLEMSTKMLGWGR 306
Query: 281 LARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLD 340
LARELTTLEA WRKFTV G VEPSRCNFSACA GNRLVLFGGEGVNMQPMDDTFVLNL+
Sbjct: 307 LARELTTLEAASWRKFTVGGRVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLE 366
Query: 341 AANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIE 400
+A PEWRRV V +SPPGRWGHTLS LNGSWLVVFGGCG+QGLLNDVFVLDLDAKQPTW E
Sbjct: 367 SAKPEWRRVKVSASPPGRWGHTLSWLNGSWLVVFGGCGQQGLLNDVFVLDLDAKQPTWRE 426
Query: 401 VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSP 460
V+ PPLPRSWHSSC ++GSKLVVSGGCT++GVLLSDT+LLDLT +KP W+EIPTSWSP
Sbjct: 427 VASEGPPLPRSWHSSCTLDGSKLVVSGGCTESGVLLSDTFLLDLTKEKPAWKEIPTSWSP 486
Query: 461 PSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGS 520
PSRLGH+LSV+G+TK+ MFGGLAKSG LRLRS ++YT+D G++ PQW+QL F +G
Sbjct: 487 PSRLGHTLSVFGKTKLFMFGGLAKSGSLRLRSCDAYTMDAGEDSPQWRQLATTGFPSIG- 545
Query: 521 QSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPP 580
PPPRLDHVAVS+PCGRIIIFGGSIAGLHSPSQLFLLDP+EEKP+WRILNVPGQPP
Sbjct: 546 -----PPPRLDHVAVSLPCGRIIIFGGSIAGLHSPSQLFLLDPAEEKPTWRILNVPGQPP 600
Query: 581 KFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDSDQ 625
KFAWGHSTCVVGGTRVLVLGGHTGEEW+LNELHELCLAS+ D D+
Sbjct: 601 KFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRPDEDE 645
>gi|357156504|ref|XP_003577479.1| PREDICTED: adagio-like protein 3-like [Brachypodium distachyon]
Length = 621
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/562 (75%), Positives = 485/562 (86%), Gaps = 9/562 (1%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
+PDFP+IYVN FE TGYRA EVLGRNCRFLQ+RDPRAQRRHPLVDP+VVSE+RRCL +
Sbjct: 67 EPDFPVIYVNAAFEAATGYRAHEVLGRNCRFLQFRDPRAQRRHPLVDPMVVSEMRRCLND 126
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKE 183
GIEF+GELLNF+KDG PL NRLRL P+ DDG++THII IQ+FS+A IDL+++SYPV+K+
Sbjct: 127 GIEFEGELLNFRKDGAPLNNRLRLIPMHGDDGSMTHIIAIQLFSDANIDLSNISYPVYKQ 186
Query: 184 NCNQQYD-QSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRR 242
N++ Q S H+ Q D CGI QLSDEVLAHNILSRL+PRDVASIGSVC R
Sbjct: 187 QSNRRPSIQDMNPASHEHTTKIQCSDYCGIFQLSDEVLAHNILSRLSPRDVASIGSVCTR 246
Query: 243 IRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKFTVRGAV 302
+ QLTKN+H+RKMVCQNAWGR+VT LE+ TK LGWGRLARELTTLEA WRKFTV G V
Sbjct: 247 MHQLTKNDHLRKMVCQNAWGRDVTVRLEMSTKMLGWGRLARELTTLEAASWRKFTVGGRV 306
Query: 303 EPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHT 362
EPSRCNFSACA GNRLVLFGGEGVNMQPMDDTFVLNLDAA PEWRRV V +SPPGRWGHT
Sbjct: 307 EPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLDAAKPEWRRVKVSASPPGRWGHT 366
Query: 363 LSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSK 422
L+ LNGSWLVVFGGCG+QGLLNDVFVLDLDA+QPTW EV+ PPLPRSWHSSC ++GSK
Sbjct: 367 LTWLNGSWLVVFGGCGQQGLLNDVFVLDLDAQQPTWREVTSDGPPLPRSWHSSCTLDGSK 426
Query: 423 LVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGL 482
L+VSGGC ++GVLLSDT+LLDL +KP W+EIPTSWS SRLGH++SVYG++K+ MFGG+
Sbjct: 427 LLVSGGCAESGVLLSDTFLLDLAKEKPAWKEIPTSWS--SRLGHTMSVYGKSKLFMFGGM 484
Query: 483 AKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRI 542
AKSG LRLRS ++YT+D+G++ PQW+QL F VG PPPRLDHV V++PCGRI
Sbjct: 485 AKSGSLRLRSSDAYTMDVGEKNPQWRQLATTGFPSVG------PPPRLDHVTVTLPCGRI 538
Query: 543 IIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGH 602
IIFGGSIAGLHSP++LFLLDP+EEKP+WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGH
Sbjct: 539 IIFGGSIAGLHSPAELFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGH 598
Query: 603 TGEEWVLNELHELCLASKQDSD 624
TGEEW+LNELHELCLAS+ D D
Sbjct: 599 TGEEWILNELHELCLASRPDED 620
>gi|326500766|dbj|BAJ95049.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 626
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/562 (73%), Positives = 472/562 (83%), Gaps = 9/562 (1%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
+PDFP+IYVN FE TGYRA EVLGRNCRFLQ+R+PRAQRRHPLVDP+VVSE+RRCL +
Sbjct: 72 EPDFPVIYVNAAFEAATGYRAHEVLGRNCRFLQFREPRAQRRHPLVDPMVVSEMRRCLSD 131
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKE 183
GIEFQGELLNF+K+G P+ NRLRL P+ DDG THII IQ+FS+A ID +++SYP++K
Sbjct: 132 GIEFQGELLNFRKNGAPVNNRLRLIPMHGDDGAFTHIIAIQLFSDANIDPSNISYPIYKP 191
Query: 184 NCNQQYD-QSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRR 242
+ + Q S SP Q + C I QLSDEVLAHNILSRL+PRDVAS+GSVC R
Sbjct: 192 QSSHRLSIQDMNRASHETSPKVQCSEYCAIFQLSDEVLAHNILSRLSPRDVASVGSVCTR 251
Query: 243 IRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKFTVRGAV 302
+ LTKN+ +RKMVCQNAWGR+VTG LE+ TK LGWGRLARELTTLEA WRKFTV G V
Sbjct: 252 MHLLTKNDLLRKMVCQNAWGRDVTGRLEMSTKMLGWGRLARELTTLEAASWRKFTVGGRV 311
Query: 303 EPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHT 362
EPSRCNFSACA GNRLVLFGGEGVNMQPM DTFVLNLDA PEW RV V +SPPGRWGHT
Sbjct: 312 EPSRCNFSACAVGNRLVLFGGEGVNMQPMSDTFVLNLDAPKPEWCRVKVSASPPGRWGHT 371
Query: 363 LSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSK 422
LS LNGSWLVVFGGCG+QGLLNDVFVLDLDA+ P W E++ PPLPRSWHSSC ++GSK
Sbjct: 372 LSWLNGSWLVVFGGCGQQGLLNDVFVLDLDAQTPAWREIASDGPPLPRSWHSSCTLDGSK 431
Query: 423 LVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGL 482
LVVSGGC ++GVLLSDT+LLDLT +KP W+EIPTSWS SRLGH+LSVYG+TK+ MFGGL
Sbjct: 432 LVVSGGCAESGVLLSDTFLLDLTKEKPAWKEIPTSWS--SRLGHTLSVYGKTKIFMFGGL 489
Query: 483 AKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRI 542
AKSG LRLRS ++Y +D+G+E PQW+QL F + PPPRLDHV VS+PCGRI
Sbjct: 490 AKSGSLRLRSSDAYIMDVGEENPQWRQLATTVF------PSGCPPPRLDHVTVSLPCGRI 543
Query: 543 IIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGH 602
IIFGGSIAGLHSP++LFLLDP+EEKP+WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGH
Sbjct: 544 IIFGGSIAGLHSPAELFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGH 603
Query: 603 TGEEWVLNELHELCLASKQDSD 624
+GEEW+LNELHELCLAS+ D D
Sbjct: 604 SGEEWILNELHELCLASRPDED 625
>gi|118767205|gb|ABL11478.1| FKF1 protein [Triticum aestivum]
Length = 626
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/560 (72%), Positives = 466/560 (83%), Gaps = 9/560 (1%)
Query: 66 DFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGI 125
D P+IYVN FE TGYRA EVLGRNCRFLQ+ DP AQRRHPLVDP+VVSE+RRCL +GI
Sbjct: 74 DXPVIYVNAAFEAATGYRAHEVLGRNCRFLQFWDPLAQRRHPLVDPMVVSEMRRCLSDGI 133
Query: 126 EFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENC 185
EFQGELLNF+K+G PL NRLRL P+ DDG THII IQ+FS+A ID +++SYPV+K
Sbjct: 134 EFQGELLNFRKNGAPLNNRLRLIPMHGDDGAFTHIIAIQLFSDANIDPSNISYPVYKPQS 193
Query: 186 NQQYD-QSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIR 244
+ + Q S H+P+ Q + C I LSDEVLA+NILSRL+PRDVAS+GSVC R+
Sbjct: 194 SHRLSFQDMNRTSHEHTPIVQCSEYCAIFNLSDEVLAYNILSRLSPRDVASVGSVCTRMH 253
Query: 245 QLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKFTVRGAVEP 304
LTKN+H+ KMVCQNAWGR+VTG LE+ TK LGWGRLARELTTL+A W+KFTV G VEP
Sbjct: 254 LLTKNDHLTKMVCQNAWGRDVTGRLEMSTKMLGWGRLARELTTLKAASWKKFTVGGRVEP 313
Query: 305 SRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLS 364
SRCNFSACA GNRLVLFGGEGVNMQPM DTFVLNL+A PEW RV V +SPPGRWGHTLS
Sbjct: 314 SRCNFSACAVGNRLVLFGGEGVNMQPMSDTFVLNLEAPKPEWCRVKVSASPPGRWGHTLS 373
Query: 365 SLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLV 424
LNGSWLVVFGGCG+QGLLNDVFVLDLDA+ P W E++ PPLPRS HSSC ++GSKLV
Sbjct: 374 WLNGSWLVVFGGCGQQGLLNDVFVLDLDAQTPAWREIASDGPPLPRSXHSSCTLDGSKLV 433
Query: 425 VSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAK 484
VSGGC ++GVLLSDT+LLDLT +KP W+EIPTSWS SRLGH+ SVYG+TK+ MFGGLAK
Sbjct: 434 VSGGCAESGVLLSDTFLLDLTKEKPTWKEIPTSWS--SRLGHTFSVYGKTKIFMFGGLAK 491
Query: 485 SGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIII 544
SG LRLRS ++Y +D G+E PQW+QL F VG PPPRLDHV VS+PCGRIII
Sbjct: 492 SGSLRLRSSDAYIMDFGEENPQWRQLATTGFPSVG------PPPRLDHVTVSLPCGRIII 545
Query: 545 FGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTG 604
FGGSIAGLHSP++LFLLDP+EEKP+WRILNVPGQPPKFAWGHSTCVVGGTR+LVLGGHTG
Sbjct: 546 FGGSIAGLHSPAELFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCVVGGTRILVLGGHTG 605
Query: 605 EEWVLNELHELCLASKQDSD 624
EEW+LNELHELCL+S+ D D
Sbjct: 606 EEWILNELHELCLSSRPDED 625
>gi|125534705|gb|EAY81253.1| hypothetical protein OsI_36431 [Oryza sativa Indica Group]
Length = 509
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/515 (77%), Positives = 448/515 (86%), Gaps = 7/515 (1%)
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
+VVSEIRRCL EGIEFQGELLNF+KDG PL NRLRL P+ DDG VTH+IGIQ+FSEA I
Sbjct: 1 MVVSEIRRCLNEGIEFQGELLNFRKDGAPLYNRLRLIPMHGDDGFVTHVIGIQLFSEANI 60
Query: 172 DLNHVSYPVFKENCNQQYD-QSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTP 230
DL++VSYPV+K+ N + + Q S H P Q + CGILQLSDEVLAHNILSRL+P
Sbjct: 61 DLSNVSYPVYKQQSNHRPNIQEINPASHEHIPKIQSSEYCGILQLSDEVLAHNILSRLSP 120
Query: 231 RDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEA 290
RDVASIGSVC R+ +LTKN+H+RKMVCQNAWGR+VT LE+ TK LGWGRLARELTTLEA
Sbjct: 121 RDVASIGSVCTRMHELTKNDHLRKMVCQNAWGRDVTVRLEMSTKMLGWGRLARELTTLEA 180
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVS 350
WRKFTV G VEPSRCNFSACA GNRLVLFGGEGVNMQPMDDTFVLNL++A PEWRRV
Sbjct: 181 ASWRKFTVGGRVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLESAKPEWRRVK 240
Query: 351 VKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
V +SPPGRWGHTLS LNGSWLVVFGGCG+QGLLNDVFVLDLDAKQPTW EV+ PPLPR
Sbjct: 241 VSASPPGRWGHTLSWLNGSWLVVFGGCGQQGLLNDVFVLDLDAKQPTWREVASEGPPLPR 300
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSV 470
SWHSSC ++GSKLVVSGGCT++GVLLSDT+LLDLT +KP W+EIPTSWSPPSRLGH+LSV
Sbjct: 301 SWHSSCTLDGSKLVVSGGCTESGVLLSDTFLLDLTKEKPAWKEIPTSWSPPSRLGHTLSV 360
Query: 471 YGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRL 530
+G+TK+ MFGGLAKSG LRLRS ++YT+D G++ PQW+QL F +G PPPRL
Sbjct: 361 FGKTKLFMFGGLAKSGSLRLRSCDAYTMDAGEDSPQWRQLATTGFPSIG------PPPRL 414
Query: 531 DHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCV 590
DHVAVS+PCGRIIIFGGSIAGLHSPSQLFLLDP+EEKP+WRILNVPGQPPKFAWGHSTCV
Sbjct: 415 DHVAVSLPCGRIIIFGGSIAGLHSPSQLFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCV 474
Query: 591 VGGTRVLVLGGHTGEEWVLNELHELCLASKQDSDQ 625
VGGTRVLVLGGHTGEEW+LNELHELCLAS+ D D+
Sbjct: 475 VGGTRVLVLGGHTGEEWILNELHELCLASRPDEDE 509
>gi|224142237|ref|XP_002324465.1| predicted protein [Populus trichocarpa]
gi|222865899|gb|EEF03030.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/576 (69%), Positives = 476/576 (82%), Gaps = 9/576 (1%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P FVV DA +PD P+IYVN VFE+ TGYRA+EVLGRNCRFLQ R P A+RRHPLVD
Sbjct: 38 TAPCGFVVTDALEPDHPLIYVNTVFEMVTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDS 97
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
VVSEIRRCLEEGIEFQGELLNF+KDG+PL+NRLRL PI +D T+TH+IGIQ F+EA I
Sbjct: 98 TVVSEIRRCLEEGIEFQGELLNFRKDGSPLMNRLRLTPIYGEDDTITHVIGIQFFTEANI 157
Query: 172 DLNHVSYPVFKENCNQQYDQSAQYFSGGHSPL-----SQHQDICGILQLSDEVLAHNILS 226
DL V KE+ ++ D+ FS + P+ + + ICGILQLSDEVL+ ILS
Sbjct: 158 DLGPVPGYSVKES-SKLADKFRSGFST-YRPIPVGDRNVSRGICGILQLSDEVLSLKILS 215
Query: 227 RLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARE 284
RLTPRD+ASIGSVCR++ +LTKNE + +MVCQNAWG E LE + K+LGWGRLARE
Sbjct: 216 RLTPRDIASIGSVCRQLYELTKNEDLWRMVCQNAWGSETASVLETVPGAKRLGWGRLARE 275
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
LTTLEA WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L++++P
Sbjct: 276 LTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSSSP 335
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
EW+ V V S PPGRWGHTLS +NGS LVVFGGCGRQGLLNDVF+LDLDAK PTW E+SG
Sbjct: 336 EWQHVHVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLNDVFILDLDAKPPTWREISGL 395
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP SW+PPSRL
Sbjct: 396 APPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPIWREIPVSWTPPSRL 455
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
GH+LSVYG K+LMFGGLAKSG LR RS + +T+DL +EEP W+ + + G G+ S +
Sbjct: 456 GHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMPGAGNPSGI 515
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 584
PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL+LLDP++EKP+WRILNVPG+PP+FAW
Sbjct: 516 APPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYLLDPTDEKPTWRILNVPGRPPRFAW 575
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
GHSTCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 576 GHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASS 611
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G +V++FGG G +++ +DL
Sbjct: 278 TLEAAAWRKLTVGGAVEPSRCNFSACAVG-NRVVLFGG---EGVNMQPMNDTFVLDLNSS 333
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ + ++ PP R H + +++FGG GL + +F+LD
Sbjct: 334 SPEWQHVHVSS----------PPPGRWGHTLSCVNGSHLVVFGGCGRQGLLN--DVFILD 381
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 382 LDAKPPTWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 439
>gi|108864482|gb|ABG22521.1| Adagio 3, putative, expressed [Oryza sativa Japonica Group]
Length = 509
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/515 (77%), Positives = 447/515 (86%), Gaps = 7/515 (1%)
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
+VVSEIRRCL EGIEFQGELLNF+KDG PL NRLRL P+ DDG VTH+IGIQ+FSEA I
Sbjct: 1 MVVSEIRRCLNEGIEFQGELLNFRKDGAPLYNRLRLIPMHGDDGFVTHVIGIQLFSEANI 60
Query: 172 DLNHVSYPVFKENCNQQYD-QSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTP 230
DL++VSYPV+K+ N + + Q S H P Q + C ILQLSDEVLAHNILSRL+P
Sbjct: 61 DLSNVSYPVYKQQSNHRPNIQEINPASHEHIPKIQSSEYCCILQLSDEVLAHNILSRLSP 120
Query: 231 RDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEA 290
RDVASIGSVC R+ +LTKN+H+RKMVCQNAWGR+VT LE+ TK LGWGRLARELTTLEA
Sbjct: 121 RDVASIGSVCTRMHELTKNDHLRKMVCQNAWGRDVTVRLEMSTKMLGWGRLARELTTLEA 180
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVS 350
WRKFTV G VEPSRCNFSACA GNRLVLFGGEGVNMQPMDDTFVLNL++A PEWRRV
Sbjct: 181 ASWRKFTVGGRVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLESAKPEWRRVK 240
Query: 351 VKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
V +SPPGRWGHTLS LNGSWLVVFGGCG+QGLLNDVFVLDLDAKQPTW EV+ PPLPR
Sbjct: 241 VSASPPGRWGHTLSWLNGSWLVVFGGCGQQGLLNDVFVLDLDAKQPTWREVASEGPPLPR 300
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSV 470
SWHSSC ++GSKLVVSGGCT++GVLLSDT+LLDLT +KP W+EIPTSWSPPSRLGH+LSV
Sbjct: 301 SWHSSCTLDGSKLVVSGGCTESGVLLSDTFLLDLTKEKPAWKEIPTSWSPPSRLGHTLSV 360
Query: 471 YGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRL 530
+G+TK+ MFGGLAKSG LRLRS ++YT+D G++ PQW+QL F +G PPPRL
Sbjct: 361 FGKTKLFMFGGLAKSGSLRLRSCDAYTMDAGEDSPQWRQLATTGFPSIG------PPPRL 414
Query: 531 DHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCV 590
DHVAVS+PCGRIIIFGGSIAGLHSPSQLFLLDP+EEKP+WRILNVPGQPPKFAWGHSTCV
Sbjct: 415 DHVAVSLPCGRIIIFGGSIAGLHSPSQLFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCV 474
Query: 591 VGGTRVLVLGGHTGEEWVLNELHELCLASKQDSDQ 625
VGGTRVLVLGGHTGEEW+LNELHELCLAS+ D D+
Sbjct: 475 VGGTRVLVLGGHTGEEWILNELHELCLASRPDEDE 509
>gi|34499883|gb|AAQ73527.1| ZEITLUPE [Mesembryanthemum crystallinum]
Length = 615
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/580 (68%), Positives = 475/580 (81%), Gaps = 6/580 (1%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P F V DA +PD PIIYVN VFE+ TGYRA+EVLGRNCRFLQ R P A+RRHPLVD
Sbjct: 35 TAPCGFTVTDALEPDHPIIYVNTVFEMVTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDS 94
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
VVV+EIRRCL++G+EFQGELLNF+KDG+PL+NRLRL PI DD T+THIIGIQ+ SEA +
Sbjct: 95 VVVAEIRRCLDDGVEFQGELLNFRKDGSPLMNRLRLTPIYGDDDTITHIIGIQLLSEANV 154
Query: 172 DLNHV-SYPVFKEN-CNQQYDQSAQYFSGGHS-PLSQHQDICGILQLSDEVLAHNILSRL 228
DL + S+PV + + QY F S S ++CG+LQ+SDEVLA I SRL
Sbjct: 155 DLGPLPSFPVKESTKSSDQYRSGLSLFPSFQSRERSICLEVCGLLQISDEVLALKIFSRL 214
Query: 229 TPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELT 286
TPRD+A++GSVCRR+ +LT+NE + +MVCQNAWG E T LE + K+LGWGRLARELT
Sbjct: 215 TPRDIAAVGSVCRRLYELTRNEDLWRMVCQNAWGTETTRVLETVPGAKRLGWGRLARELT 274
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
TLEA WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L+A+NPEW
Sbjct: 275 TLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNPEW 334
Query: 347 RRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
+ V V S PPGRWGHTLS +NGS LVVFGGCG QGLLNDVFVLDLDAKQPTW E+SG AP
Sbjct: 335 QHVKVSSPPPGRWGHTLSCMNGSNLVVFGGCGTQGLLNDVFVLDLDAKQPTWREISGLAP 394
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGH 466
PLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLD+ DKP+WREIP +WSPPSRLGH
Sbjct: 395 PLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDIAMDKPVWREIPVTWSPPSRLGH 454
Query: 467 SLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVP 526
+LSVYG K+LMFGGLAKSG LR RS + YT+DL +++P W+ + +A G G+ V P
Sbjct: 455 TLSVYGGRKILMFGGLAKSGPLRFRSSDVYTMDLSEDDPCWRCVTGSAMPGAGNPGGVAP 514
Query: 527 PPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGH 586
PPRLDHVAVS+P GRI++FGGS+AGLHS SQL+LLDP+EEKP+WRILNVPG+PP FAWGH
Sbjct: 515 PPRLDHVAVSLPGGRILVFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPGRPPSFAWGH 574
Query: 587 STCVVGGTRVLVLGGHTGEEWVLNELHELCLASK-QDSDQ 625
STCVVGGTR +VLGG TGE+W+L ++HEL LAS ++ DQ
Sbjct: 575 STCVVGGTRAIVLGGQTGEDWMLTDIHELSLASTVKEEDQ 614
>gi|255585018|ref|XP_002533219.1| hypothetical protein RCOM_0545900 [Ricinus communis]
gi|223526962|gb|EEF29159.1| hypothetical protein RCOM_0545900 [Ricinus communis]
Length = 613
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/579 (69%), Positives = 473/579 (81%), Gaps = 15/579 (2%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P FVV DA +PD PIIYVN VFE+ TGYRA+EVLGRNCRFLQ R P A+RRHPLVD
Sbjct: 38 TAPCGFVVTDALEPDHPIIYVNTVFEMVTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDS 97
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
VV+EIRRCLEEG+EFQGELLNF+KDG+PL+NRLRL PI DD T+TH+IGIQ FSEA I
Sbjct: 98 TVVAEIRRCLEEGVEFQGELLNFRKDGSPLMNRLRLTPIYGDDDTITHLIGIQFFSEANI 157
Query: 172 DLNHVSYPVFKENCNQQYDQSAQYFSGGHS-----PLSQH---QDICGILQLSDEVLAHN 223
DL V KE+ +S+ F G S P+ + +CGILQLSDEVL+
Sbjct: 158 DLGPVPSSSIKESA-----KSSDRFRSGFSTYRPVPVGDRNVCRGVCGILQLSDEVLSLK 212
Query: 224 ILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRL 281
ILSRLTPRD+AS+GSVCR++ +LTKNE + ++VCQNAWG E T LE + K+LGWGRL
Sbjct: 213 ILSRLTPRDIASVGSVCRQLYELTKNEDLWRIVCQNAWGSETTRVLETVPGAKRLGWGRL 272
Query: 282 ARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDA 341
ARELTTLEA WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L++
Sbjct: 273 ARELTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNS 332
Query: 342 ANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV 401
+NPEW+ V V S PPGRWGHTLS +NGS LVVFGGCGRQGLLNDVFVLDLDAK PTW E+
Sbjct: 333 SNPEWQHVQVSSPPPGRWGHTLSCVNGSNLVVFGGCGRQGLLNDVFVLDLDAKPPTWREI 392
Query: 402 SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPP 461
SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP +W+PP
Sbjct: 393 SGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVAWTPP 452
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
SRLGH+LSVYG K+LMFGGLAKSG LR RS + +T+DL ++EP W+ + + G G+
Sbjct: 453 SRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEDEPCWRCVTGSGMPGAGNP 512
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
V PPPRLDHVAV++P GRI+IFGGS+AGLHS SQL+LLDP++EKP+WRILNVPG+PP+
Sbjct: 513 GGVAPPPRLDHVAVNLPGGRILIFGGSVAGLHSASQLYLLDPTDEKPTWRILNVPGRPPR 572
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
FAWGHSTCVVGGTR +VLGG TGEEW+L ELHEL LAS
Sbjct: 573 FAWGHSTCVVGGTRAIVLGGQTGEEWMLRELHELSLASS 611
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G +V++FGG G +++ +DL
Sbjct: 278 TLEAAAWRKLTVGGAVEPSRCNFSACAVG-NRVVLFGG---EGVNMQPMNDTFVLDLNSS 333
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ + Q + PP R H + +++FGG GL + +F+LD
Sbjct: 334 NPEWQHV----------QVSSPPPGRWGHTLSCVNGSNLVVFGGCGRQGLLN--DVFVLD 381
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 382 LDAKPPTWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 439
>gi|219885993|gb|ACL53371.1| unknown [Zea mays]
gi|223942805|gb|ACN25486.1| unknown [Zea mays]
Length = 513
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/510 (77%), Positives = 442/510 (86%), Gaps = 7/510 (1%)
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
+VVSEIRRCL EGIEF GELLNF+KDG PL NRL L P+ DDG VTH+IGIQ+FSEA I
Sbjct: 1 MVVSEIRRCLNEGIEFHGELLNFRKDGAPLYNRLSLIPMHGDDGYVTHVIGIQLFSEANI 60
Query: 172 DLNHVSYPVFKENCNQQYD-QSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTP 230
DL+ VSYPV+K+ N + Q S H+P Q D CGILQLSDEVLAHNILSRL+P
Sbjct: 61 DLSSVSYPVYKQQTNNRPSIQDLNSASHEHAPKVQSADHCGILQLSDEVLAHNILSRLSP 120
Query: 231 RDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEA 290
RDVASIGSVC R+ +LTKN+H+RKMVCQNAWGR+ T LE+ TK +GWGRLARELTTLEA
Sbjct: 121 RDVASIGSVCTRMHELTKNDHLRKMVCQNAWGRDATVKLEMSTKMVGWGRLARELTTLEA 180
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVS 350
WRKFTV G VEPSRCNFSACA GNRLVLFGGEGVNMQPMDDTFVLN++AA PEWRRV
Sbjct: 181 ASWRKFTVGGRVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNMEAARPEWRRVK 240
Query: 351 VKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
V +SPPGRWGHTLS LNGSWLVVFGGCG+QGLLNDVFVLDLDA+QPTW EV+ PPLPR
Sbjct: 241 VSASPPGRWGHTLSWLNGSWLVVFGGCGQQGLLNDVFVLDLDAQQPTWREVASEGPPLPR 300
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSV 470
SWHSSC ++GSKLVVSGGCT++GVLLSDT+LLDLT +KP WREIPTSWSPPSRLGH++SV
Sbjct: 301 SWHSSCTLDGSKLVVSGGCTESGVLLSDTFLLDLTKEKPAWREIPTSWSPPSRLGHTMSV 360
Query: 471 YGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRL 530
YG TK+LMFGGLAKSG LRLRS ++YT+D+G++ PQW+QL F VG PPPRL
Sbjct: 361 YGTTKLLMFGGLAKSGSLRLRSSDAYTMDVGEDSPQWRQLATTGFPNVG------PPPRL 414
Query: 531 DHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCV 590
DHVAVS+PCGRIIIFGGSIAGLHSP+QLFL+DP+EEKP+WRILNVPG+PPKFAWGHSTCV
Sbjct: 415 DHVAVSLPCGRIIIFGGSIAGLHSPAQLFLVDPAEEKPTWRILNVPGKPPKFAWGHSTCV 474
Query: 591 VGGTRVLVLGGHTGEEWVLNELHELCLASK 620
VGGTRVLVLGGHTGEEW+LNELHELCLAS+
Sbjct: 475 VGGTRVLVLGGHTGEEWILNELHELCLASR 504
>gi|351727148|ref|NP_001235871.1| clock-associated PAS protein ZEITLUPE 2 [Glycine max]
gi|87138099|gb|ABD28286.1| clock-associated PAS protein ZEITLUPE 2 [Glycine max]
Length = 617
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/576 (69%), Positives = 469/576 (81%), Gaps = 9/576 (1%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P FVV DA +PD PIIYVN VFEI TGYRA++VLGRNCRFLQ R P A+RRHPLVD
Sbjct: 42 TAPCGFVVTDAHEPDNPIIYVNTVFEIVTGYRAEDVLGRNCRFLQCRGPFAKRRHPLVDS 101
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
VVSEIRRCLEEGIEFQGELLNF+KDG+PL+NRLRL PI DD T+TH+IGIQ F+EA I
Sbjct: 102 TVVSEIRRCLEEGIEFQGELLNFRKDGSPLMNRLRLTPIYGDDETITHVIGIQFFTEANI 161
Query: 172 DLNHVSYPVFKENCN-----QQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILS 226
DL V KE+ + S Q G +S+ +CGI QLSDEVL+ IL+
Sbjct: 162 DLGPVPGSTIKESAKSSDRFRSVLSSLQTLPVGGRNVSR--GVCGIFQLSDEVLSLKILA 219
Query: 227 RLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARE 284
+LTPRD+AS+ SVCRR+ +LTKNE + +MVCQNAWG E T LE + ++LGWGRLARE
Sbjct: 220 QLTPRDIASVSSVCRRLYELTKNEDLWRMVCQNAWGSETTHVLETVPGARRLGWGRLARE 279
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
LTTLEA WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L+++NP
Sbjct: 280 LTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSSNP 339
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
EW+ V V S PPGRWGHTLS +NGS LVVFGGCGRQGLLNDVFVLDLDAK PTW E+SG
Sbjct: 340 EWQHVQVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLNDVFVLDLDAKPPTWREISGL 399
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP +W+PPSRL
Sbjct: 400 APPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVAWTPPSRL 459
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
GH+LSVYG K+LMFGGLAKSG LR RS + +T+DL +EEP W+ + + G G+ +
Sbjct: 460 GHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMPGAGNPGGI 519
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 584
PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL++LDP++EKP+WRILNVPG PP+FAW
Sbjct: 520 APPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGCPPRFAW 579
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
GHSTCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 580 GHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASS 615
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G +V++FGG G +++ +DL
Sbjct: 282 TLEAAAWRKLTVGGAVEPSRCNFSACAVG-NRVVLFGG---EGVNMQPMNDTFVLDLNSS 337
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ + Q + PP R H + +++FGG GL + +F+LD
Sbjct: 338 NPEWQHV----------QVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLN--DVFVLD 385
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 386 LDAKPPTWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 443
>gi|351726710|ref|NP_001235856.1| PAS protein ZEITLUPE 1 [Glycine max]
gi|87138097|gb|ABD28285.1| PAS protein ZEITLUPE 1 [Glycine max]
Length = 617
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/576 (69%), Positives = 466/576 (80%), Gaps = 9/576 (1%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P FVV DA DPD PIIYVN VFEI TGY A++VLGRNCRFLQ R P A+RRHPLVD
Sbjct: 42 TAPCGFVVTDALDPDHPIIYVNTVFEIVTGYCAEDVLGRNCRFLQCRGPFAKRRHPLVDS 101
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
VVSEIRRCLEEGIEFQGELLNF+KDG+PL+NRLRL PI DD T+TH+IGIQ F+EA I
Sbjct: 102 TVVSEIRRCLEEGIEFQGELLNFRKDGSPLMNRLRLTPIYGDDETITHVIGIQFFTEANI 161
Query: 172 DLNHVSYPVFKENCN-----QQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILS 226
DL V KE+ + S Q G +S+ +CGI QLSDEVL+ IL+
Sbjct: 162 DLGPVPGSTIKESAKSSDRFRSVLSSLQTLPVGDRNVSR--GVCGIFQLSDEVLSLKILA 219
Query: 227 RLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARE 284
RLTPRD+AS+ SVCRR+ +LTKNE + +MVCQNAWG E T L+ + + LGWGRLARE
Sbjct: 220 RLTPRDIASVSSVCRRLYELTKNEDLWRMVCQNAWGSETTRVLKTVPGARGLGWGRLARE 279
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
LTTLEA WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L+++NP
Sbjct: 280 LTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSSNP 339
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
EW+ V V S PPGRWGHTLS +NGS LVVFGGCGRQGLLNDVFVLDLDAK PTW E+SG
Sbjct: 340 EWQHVHVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLNDVFVLDLDAKPPTWREISGL 399
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP +W+PPSRL
Sbjct: 400 APPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVAWTPPSRL 459
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
GH+LSVYG K+LMFGGLAKSG LR RS + +T+DL +EEP W+ + + G G+
Sbjct: 460 GHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMLGAGNPGGT 519
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 584
PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL++LDP++EKP+WRILNVPG PP+FAW
Sbjct: 520 APPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGCPPRFAW 579
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
GHSTCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 580 GHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASS 615
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G +V++FGG G +++ +DL
Sbjct: 282 TLEAAAWRKLTVGGAVEPSRCNFSACAVG-NRVVLFGG---EGVNMQPMNDTFVLDLNSS 337
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ + ++ PP R H + +++FGG GL + +F+LD
Sbjct: 338 NPEWQHVHVSS----------PPPGRWGHTLSCVNGSHLVVFGGCGRQGLLN--DVFVLD 385
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 386 LDAKPPTWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 443
>gi|225446020|ref|XP_002269105.1| PREDICTED: adagio protein 1 [Vitis vinifera]
Length = 611
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/574 (68%), Positives = 468/574 (81%), Gaps = 5/574 (0%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P FVV DA +PD PIIYVN +FE+ TGY+A+EVLGRNCRFLQYR P A+RRHPLVD
Sbjct: 36 TAPCGFVVTDALEPDHPIIYVNTMFEMVTGYQAEEVLGRNCRFLQYRGPFAKRRHPLVDS 95
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
VVSEIRRCLE+G+EF G+LLNF+KDG+PL+NRLRL PI DD T+TH+IGIQ F+EA I
Sbjct: 96 TVVSEIRRCLEDGVEFHGDLLNFRKDGSPLMNRLRLTPIYGDDETITHVIGIQFFTEANI 155
Query: 172 DLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH---QDICGILQLSDEVLAHNILSRL 228
DL + + KE+ + + S P + +CGI+QLSDEVL+ ILS L
Sbjct: 156 DLGPLPGSLAKESARSSGRFRSGFPSYPSVPAGNRNICRGVCGIMQLSDEVLSLKILSLL 215
Query: 229 TPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELT 286
TPRD+ASIGSVCRR ++TKNE + +MVCQNAWG E T LE + K+LGWGRLARELT
Sbjct: 216 TPRDIASIGSVCRRFYEITKNEDLWRMVCQNAWGSETTRVLETVPGAKQLGWGRLARELT 275
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
TLEA WRK TV GAVEPSRCNFSACA G+R+VLFGGEGVNMQPM+DTFVL+L+++NPEW
Sbjct: 276 TLEAAAWRKLTVGGAVEPSRCNFSACAVGSRVVLFGGEGVNMQPMNDTFVLDLNSSNPEW 335
Query: 347 RRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
+ V V S PPGRWGHTL+ +NGS LVVFGGCGRQGLLNDVFVLDLDAK P W E+SG AP
Sbjct: 336 QHVQVNSPPPGRWGHTLTCVNGSNLVVFGGCGRQGLLNDVFVLDLDAKPPAWREISGLAP 395
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGH 466
PLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP +WSPPSRLGH
Sbjct: 396 PLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPIWREIPVAWSPPSRLGH 455
Query: 467 SLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVP 526
+LSVYG K+LMFGGLAKSG LR RS + YT+DL ++ P W+ + + G G+ + + P
Sbjct: 456 TLSVYGGRKILMFGGLAKSGPLRFRSSDVYTMDLSEDNPCWRCVTGSGMPGAGNPAGIAP 515
Query: 527 PPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGH 586
PPRLDHVAVS+P GRI+IFGGS+AGLHS SQL+LLDP++EKP+WRILNVPG+PP+FAWGH
Sbjct: 516 PPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYLLDPTDEKPTWRILNVPGRPPRFAWGH 575
Query: 587 STCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
STCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 576 STCVVGGTRAIVLGGQTGEEWMLSELHELSLASS 609
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G ++V++FGG G +++ +DL
Sbjct: 276 TLEAAAWRKLTVGGAVEPSRCNFSACAVG-SRVVLFGG---EGVNMQPMNDTFVLDLNSS 331
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ ++ N+ PP R H + +++FGG GL + +F+LD
Sbjct: 332 NPEWQHVQVNS----------PPPGRWGHTLTCVNGSNLVVFGGCGRQGLLN--DVFVLD 379
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 380 LDAKPPAWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 437
>gi|111481711|gb|ABC25060.2| ZTL [Ipomoea nil]
Length = 622
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/575 (68%), Positives = 474/575 (82%), Gaps = 9/575 (1%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
TP FVV+DA +PD P+IYVN VFE+ TGYRA+EVLGRNCRFLQ R P A+RRHPLVD
Sbjct: 47 TPCGFVVSDALEPDNPVIYVNSVFEMVTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSA 106
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
VV+EIRRCL +G+EFQGELLNF+KDG+PL+NRLR+ PI DD T+THIIGIQ F+E +D
Sbjct: 107 VVAEIRRCLVQGLEFQGELLNFRKDGSPLMNRLRMTPIYGDDETITHIIGIQFFTEINLD 166
Query: 173 LNHVSYPVFKENC--NQQYDQSAQYF---SGGHSPLSQHQDICGILQLSDEVLAHNILSR 227
L + KE+ + +Y S F S G+ +++ +CGILQLSDEVL+ ILSR
Sbjct: 167 LGPLPGSSVKESIRSSDRYRSSLSSFGPFSDGNRNITR--GVCGILQLSDEVLSLKILSR 224
Query: 228 LTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLAREL 285
LTPRD+AS+GSVCR + +LTKNE + +MVCQNAWG E T LE + K+LGWGRLAREL
Sbjct: 225 LTPRDIASVGSVCRGLYELTKNEDLWRMVCQNAWGSETTRVLETVPGAKRLGWGRLAREL 284
Query: 286 TTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE 345
TTLE+ WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L+++NPE
Sbjct: 285 TTLESAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSSNPE 344
Query: 346 WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGA 405
W+ V V S PPGRWGHTLS +NGS LVVFGGCG QGLLNDVFVLDLDAKQPTW E+S A
Sbjct: 345 WKHVKVGSPPPGRWGHTLSCVNGSHLVVFGGCGTQGLLNDVFVLDLDAKQPTWREISSLA 404
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLG 465
PPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP +W+PPSRLG
Sbjct: 405 PPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVAWTPPSRLG 464
Query: 466 HSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVV 525
H+LSVYG K+LMFGGLAKSG LR RS + +T+DLG+E+P W+ + + G G+ +
Sbjct: 465 HTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLGEEQPCWRCVTGSGMPGAGNPGGIA 524
Query: 526 PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWG 585
PPPRLDHVAVS+P GRI++FGGS+AGLHS SQL++LDP+EEKP+WRILNVPG+PP+FAWG
Sbjct: 525 PPPRLDHVAVSLPGGRILVFGGSVAGLHSASQLYILDPTEEKPTWRILNVPGRPPRFAWG 584
Query: 586 HSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
HSTCVVGGTR +VLGG TGEEW+L+ELHEL LA+
Sbjct: 585 HSTCVVGGTRAIVLGGQTGEEWMLSELHELSLANS 619
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G +V++FGG G +++ +DL
Sbjct: 286 TLESAAWRKLTVGGAVEPSRCNFSACAVG-NRVVLFGG---EGVNMQPMNDTFVLDLNSS 341
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+WK ++ VGS PP R H + +++FGG GL + +F+LD
Sbjct: 342 NPEWKHVK------VGSP----PPGRWGHTLSCVNGSHLVVFGGCGTQGLLN--DVFVLD 389
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
++P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 390 LDAKQPTWREISSLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 447
>gi|147845845|emb|CAN82181.1| hypothetical protein VITISV_008337 [Vitis vinifera]
Length = 609
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/575 (68%), Positives = 471/575 (81%), Gaps = 13/575 (2%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P FVV DA +PD PIIYVN +FE+ TGY+A+EVLGRNCRFLQYR P A+RRHPLVD
Sbjct: 36 TAPCGFVVTDALEPDHPIIYVNTMFEMVTGYQAEEVLGRNCRFLQYRGPFAKRRHPLVDS 95
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
VVSEIRRCLE+G+EF G+LLNF+KDG+PL+NRLRL PI DD T+TH+IGIQ F+EA I
Sbjct: 96 TVVSEIRRCLEDGVEFHGDLLNFRKDGSPLMNRLRLTPIYGDDETITHVIGIQFFTEANI 155
Query: 172 DLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPR 231
DL + + KE SA+ +G + + +CGI+QLSDEVL+ ILS LTPR
Sbjct: 156 DLGPLPGSLAKE--------SARSSAGNRNIC---RGVCGIMQLSDEVLSLKILSLLTPR 204
Query: 232 DVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELTTLE 289
D+ASIGSVCRR ++TKNE + +MVCQNAWG E T LE + K+LGWGRLARELTTLE
Sbjct: 205 DIASIGSVCRRFYEITKNEDLWRMVCQNAWGSETTRVLETVPGAKQLGWGRLARELTTLE 264
Query: 290 AVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRV 349
A WRK TV GAVEPSRCNFSACA G+R+VLFGGEGVNMQPM+DTFVL+L+++NPEW+ V
Sbjct: 265 AAAWRKLTVGGAVEPSRCNFSACAVGSRVVLFGGEGVNMQPMNDTFVLDLNSSNPEWQHV 324
Query: 350 SVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLP 409
V S PPGRWGHTL+ +NGS LVVFGGCGRQGLLNDVFVLDLDAK P W E+SG APPLP
Sbjct: 325 QVNSPPPGRWGHTLTCVNGSNLVVFGGCGRQGLLNDVFVLDLDAKPPAWREISGLAPPLP 384
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLS 469
RSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP +WSPPSRLGH+LS
Sbjct: 385 RSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPIWREIPVAWSPPSRLGHTLS 444
Query: 470 VYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPR 529
VYG K+LMFGGLAKSG LR RS + YT+DL ++ P W+ + + G G+ + + PPPR
Sbjct: 445 VYGGRKILMFGGLAKSGPLRFRSSDVYTMDLSEDNPCWRCVTGSGMPGAGNPAGIAPPPR 504
Query: 530 LDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTC 589
LDHVAVS+P GRI+IFGGS+AGLHS SQL+LLDP++EKP+WRILNVPG+PP+FAWGHSTC
Sbjct: 505 LDHVAVSLPGGRILIFGGSVAGLHSASQLYLLDPTDEKPTWRILNVPGRPPRFAWGHSTC 564
Query: 590 VVGGTRVLVLGGHTGEEWVLNELHELCLASKQDSD 624
VVGGTR +VLGG TGEEW+L+ELHEL LA + + +
Sbjct: 565 VVGGTRAIVLGGQTGEEWMLSELHELSLAKEDEQE 599
>gi|449461199|ref|XP_004148329.1| PREDICTED: adagio protein 1-like [Cucumis sativus]
Length = 611
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/582 (68%), Positives = 467/582 (80%), Gaps = 15/582 (2%)
Query: 49 FYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPL 108
+ T P FVV D+ +PD PIIYVN VFE+ TGYRA+EVLGRNCRFLQ R P A+RRHPL
Sbjct: 33 LFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
VD VVSEIRRCLE+G EFQGELLNF+KDGTPL+N+LRL PI DD TVTH+IGIQ F+E
Sbjct: 93 VDSSVVSEIRRCLEDGTEFQGELLNFRKDGTPLMNKLRLTPIYGDDETVTHVIGIQFFTE 152
Query: 169 AKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPL--------SQHQDICGILQLSDEVL 220
A IDL V+ KE +S+ F G S + + +CGILQLSDEV+
Sbjct: 153 ADIDLGPVTSSTTKE-----LAKSSDKFCSGLSSFRFTSVGDRNICRGVCGILQLSDEVI 207
Query: 221 AHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGW 278
+ ILSRLTPRD+AS+GSVCRR +LTKNE + +MVCQNAWG E T LE + + LGW
Sbjct: 208 SLKILSRLTPRDIASVGSVCRRFYELTKNEDLWRMVCQNAWGSETTRVLETVPGARTLGW 267
Query: 279 GRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLN 338
GRLARELTTLEA WRK TV G+VEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+
Sbjct: 268 GRLARELTTLEASAWRKLTVGGSVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLD 327
Query: 339 LDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTW 398
L+++ PEW+ V V S PPGRWGHTLS +NGS LVVFGGCGRQGLLNDVF+LDLDA P W
Sbjct: 328 LNSSKPEWQHVQVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLNDVFLLDLDASPPAW 387
Query: 399 IEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSW 458
E+SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP +W
Sbjct: 388 REISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPIWREIPVTW 447
Query: 459 SPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGV 518
+PPSRLGH+LSVYG K+LMFGGLAKSG LR RS + +T+DL +EEP W+ + + G
Sbjct: 448 TPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVAGSGVPGA 507
Query: 519 GSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ 578
G+ V PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL+LLDP+EEKP+WRIL VPG+
Sbjct: 508 GNPGGVAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYLLDPTEEKPTWRILKVPGR 567
Query: 579 PPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
PP+FAWGHSTCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 568 PPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASS 609
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ S PSR S G +V++FGG G +++ +DL
Sbjct: 276 TLEASAWRKLTVGGSVEPSRCNFSACAVG-NRVVLFGG---EGVNMQPMNDTFVLDLNSS 331
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
+P+W+ + Q + PP R H + +++FGG GL + +FLLD
Sbjct: 332 KPEWQHV----------QVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLN--DVFLLD 379
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 380 LDASPPAWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 437
>gi|375126873|gb|AFA35963.1| zeitlupe [Nicotiana attenuata]
Length = 629
Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/574 (68%), Positives = 466/574 (81%), Gaps = 9/574 (1%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
P FVV DA +PD PIIYVN VFE+ TGYRA+EVLGRNCRFLQ R P A+RRHPLVD
Sbjct: 54 APCGFVVTDALEPDHPIIYVNSVFEMVTGYRAEEVLGRNCRFLQCRGPYAKRRHPLVDST 113
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
VV+EIRRC+++GIEFQGELLNF+KDG+PL+NRLR+ PI DD +THIIGIQ F E ID
Sbjct: 114 VVAEIRRCIDQGIEFQGELLNFRKDGSPLMNRLRMTPIYGDDEAITHIIGIQFFKEVNID 173
Query: 173 LNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQ-----HQDICGILQLSDEVLAHNILSR 227
L + + KE + S G P+S+ + C ILQLSDEVLA ILSR
Sbjct: 174 LGPLPGSLVKEPTRLLDKYRSSLSSSG--PISEGNRTISRGFCSILQLSDEVLALKILSR 231
Query: 228 LTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLAREL 285
LTPRD+AS+GSV RR+ +LTKNE + +MVCQNAWG E T LE + K+LGWGRLAREL
Sbjct: 232 LTPRDIASVGSVSRRLYELTKNEDLWRMVCQNAWGSETTRVLETVPGAKRLGWGRLAREL 291
Query: 286 TTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE 345
TTLEA WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L+++NPE
Sbjct: 292 TTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSSNPE 351
Query: 346 WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGA 405
W+ V V S PPGRWGHTLS +NGS LVVFGGCGRQGLLNDVFVLDLDAKQPTW E+S A
Sbjct: 352 WKYVKVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLNDVFVLDLDAKQPTWREISSLA 411
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLG 465
PPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP +W+PPSRLG
Sbjct: 412 PPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSIEKPVWREIPVTWTPPSRLG 471
Query: 466 HSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVV 525
H+LSVYG K+LMFGGLAKSG LR RS + +T+DL +EEP W+ + + G G+ V
Sbjct: 472 HTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMPGAGNPGGVA 531
Query: 526 PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWG 585
PPPRLDHVAVS+P GRI++FGGS+AGLHS SQL++LDP+EEKP+WRILNVPG+PP+FAWG
Sbjct: 532 PPPRLDHVAVSLPGGRILVFGGSVAGLHSASQLYILDPTEEKPTWRILNVPGRPPRFAWG 591
Query: 586 HSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
HSTC+VGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 592 HSTCIVGGTRAIVLGGQTGEEWMLSELHELSLAS 625
>gi|356556190|ref|XP_003546409.1| PREDICTED: adagio protein 1-like [Glycine max]
Length = 611
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/592 (67%), Positives = 475/592 (80%), Gaps = 11/592 (1%)
Query: 37 DDTELSLKPGLLFYP---TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCR 93
DD + ++ P L +P T P FVV DA DPD PIIYVN VFE+ TGYRA+EVLGRNCR
Sbjct: 21 DDDDDAVGP--LPFPVLQTAPCGFVVTDALDPDHPIIYVNAVFEMVTGYRAEEVLGRNCR 78
Query: 94 FLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDD 153
FLQ R P A+RRHPLVD VVSEIRRCL+EG+EFQGELLNF+KDG+PL+NRLRL PI D
Sbjct: 79 FLQCRGPFAKRRHPLVDSTVVSEIRRCLDEGVEFQGELLNFRKDGSPLMNRLRLTPIYGD 138
Query: 154 DGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH---QDIC 210
G +TH+IGIQ F+EA IDL + KE+ + S P+ + +C
Sbjct: 139 -GEITHVIGIQFFTEANIDLGPLPGSTIKESTKSSDRFHSVLSSLNPLPVGDRNVTRGVC 197
Query: 211 GILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALE 270
GILQLSDEVL+ IL+RLTPRD+AS+ SVCRR+ +LT+NE + +MVCQNAWG E T LE
Sbjct: 198 GILQLSDEVLSLKILARLTPRDIASVASVCRRLYELTENEDLWRMVCQNAWGSETTRVLE 257
Query: 271 LM--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNM 328
+ ++LGWGRLARELTTLEA WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNM
Sbjct: 258 TVPGARRLGWGRLARELTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNM 317
Query: 329 QPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFV 388
QPM+DTFVL+L+++NPEW+ V V S PPGRWGHTLS +NGS LVVFGGCG QGLLNDVFV
Sbjct: 318 QPMNDTFVLDLNSSNPEWQHVQVSSPPPGRWGHTLSCVNGSRLVVFGGCGTQGLLNDVFV 377
Query: 389 LDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDK 448
LDLDAK PTW E+SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +K
Sbjct: 378 LDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 437
Query: 449 PMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWK 508
P+WREIP +W+PPSRLGH+LSVYG K+LMFGGLAKSG LR RS + +T+DL +EEP W+
Sbjct: 438 PVWREIPVAWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWR 497
Query: 509 QLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKP 568
+ + G G+ + PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL++LDP++EKP
Sbjct: 498 CVTGSGMPGAGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKP 557
Query: 569 SWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
+WRILNVPG PP+FAWGHSTCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 558 TWRILNVPGCPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASS 609
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G +V++FGG G +++ +DL
Sbjct: 276 TLEAAAWRKLTVGGAVEPSRCNFSACAVG-NRVVLFGG---EGVNMQPMNDTFVLDLNSS 331
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ + Q + PP R H + R+++FGG GL + +F+LD
Sbjct: 332 NPEWQHV----------QVSSPPPGRWGHTLSCVNGSRLVVFGGCGTQGLLN--DVFVLD 379
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 380 LDAKPPTWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 437
>gi|449507050|ref|XP_004162920.1| PREDICTED: LOW QUALITY PROTEIN: adagio protein 1-like [Cucumis
sativus]
Length = 611
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/582 (68%), Positives = 466/582 (80%), Gaps = 15/582 (2%)
Query: 49 FYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPL 108
+ T P FVV D+ +PD PIIYVN VFE+ TGYRA+EVLGRNCRFLQ R P A+RRHPL
Sbjct: 33 LFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
VD VVSEIRRCLE+G EFQGELLNF+KDGTPL+N+LRL PI DD TVTH+IGIQ F+E
Sbjct: 93 VDSSVVSEIRRCLEDGTEFQGELLNFRKDGTPLMNKLRLTPIYGDDETVTHVIGIQFFTE 152
Query: 169 AKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPL--------SQHQDICGILQLSDEVL 220
A IDL V+ KE +S+ F G S + + +CGILQLSDEV+
Sbjct: 153 ADIDLGPVTSSTTKE-----LAKSSDKFCSGLSSFRFTSVGDRNICRGVCGILQLSDEVI 207
Query: 221 AHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGW 278
+ ILSRLTPRD+AS+GSVCRR +LTKNE + +MVCQNAWG E T LE + + LGW
Sbjct: 208 SLKILSRLTPRDIASVGSVCRRFYELTKNEDLWRMVCQNAWGSETTRVLETVPGARTLGW 267
Query: 279 GRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLN 338
GRLARELTTLEA WRK TV G+VEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+
Sbjct: 268 GRLARELTTLEASAWRKLTVGGSVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLD 327
Query: 339 LDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTW 398
L+++ PEW+ V V S PPGRWGHTLS +NGS LVVFGGCGRQGLLNDVF+LDLDA P W
Sbjct: 328 LNSSKPEWQHVQVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLNDVFLLDLDASPPAW 387
Query: 399 IEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSW 458
E+SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP +W
Sbjct: 388 REISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPIWREIPVTW 447
Query: 459 SPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGV 518
+PPSRLGH+LSVYG K+LMFGGLAKSG LR RS + +T+DL +EEP W+ + + G
Sbjct: 448 TPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVAGSGVPGA 507
Query: 519 GSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ 578
G+ V PPPRLDHVAVS+P GRI+ FGGS+AGLHS SQL+LLDP+EEKP+WRIL VPG+
Sbjct: 508 GNPGGVAPPPRLDHVAVSLPGGRILXFGGSVAGLHSASQLYLLDPTEEKPTWRILKVPGR 567
Query: 579 PPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
PP+FAWGHSTCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 568 PPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASS 609
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ S PSR S G +V++FGG G +++ +DL
Sbjct: 276 TLEASAWRKLTVGGSVEPSRCNFSACAVG-NRVVLFGG---EGVNMQPMNDTFVLDLNSS 331
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
+P+W+ + Q + PP R H + +++FGG GL + +FLLD
Sbjct: 332 KPEWQHV----------QVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLN--DVFLLD 379
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 380 LDASPPAWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 437
>gi|225429778|ref|XP_002282691.1| PREDICTED: adagio protein 1-like isoform 1 [Vitis vinifera]
Length = 613
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/574 (68%), Positives = 466/574 (81%), Gaps = 6/574 (1%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P FVV+DA +PDFPIIYVN FE+ TGYRA+E+LGRNCRFLQ R P A+RRH LVD
Sbjct: 37 TAPCGFVVSDALEPDFPIIYVNTGFELVTGYRAEEILGRNCRFLQCRGPFAKRRHQLVDS 96
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
VVSEIRRCLE G+EFQG+LLNF+KDG+PL+NRLRL PI DD T+TH+IGIQ F+EA +
Sbjct: 97 TVVSEIRRCLELGVEFQGDLLNFRKDGSPLMNRLRLTPIYGDDKTITHVIGIQFFTEANL 156
Query: 172 DLNHVSYPVFKENCNQQYDQSAQYFSGGHSP---LSQHQDICGILQLSDEVLAHNILSRL 228
DL + V KE+ S+ S P ++ ++C + QLSDEVL+H ILSRL
Sbjct: 157 DLGPLPGSVTKESYRSFDRFSSDLMSSRSIPSGSVNAGHEVCEMFQLSDEVLSHKILSRL 216
Query: 229 TPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELT 286
TPRD+AS+ SVC+R+ QLTKNE + ++VCQNAWG E T LE + K+LGW RLARELT
Sbjct: 217 TPRDIASVASVCKRLYQLTKNEDLWRLVCQNAWGCETTRVLETVPGAKRLGWVRLARELT 276
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
TLEA WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L+A NPEW
Sbjct: 277 TLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNATNPEW 336
Query: 347 RRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
+ V V S PPGRWGHTLS +N S LVVFGGCGRQGLLNDVFVLDLDAK PTW E+SG AP
Sbjct: 337 QHVKVSSPPPGRWGHTLSCVNDSLLVVFGGCGRQGLLNDVFVLDLDAKHPTWREISGLAP 396
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT-DKPMWREIPTSWSPPSRLG 465
PLPRSWHSSC ++G+KLVVSGGC D+GVLLSDT+LLDL T +KP+WREIP +W+PPSRLG
Sbjct: 397 PLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLDLATIEKPVWREIPVAWTPPSRLG 456
Query: 466 HSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVV 525
HSLSVYG K+LMFGGLAKSG LR RS + +T+DL +EEP W+ + + G G+ +
Sbjct: 457 HSLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMPGSGNPAGTA 516
Query: 526 PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWG 585
PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQ +LLDP++EKP+WRILNVPG+PP+FAWG
Sbjct: 517 PPPRLDHVAVSLPGGRILIFGGSVAGLHSASQSYLLDPTDEKPTWRILNVPGRPPRFAWG 576
Query: 586 HSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
HSTCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 577 HSTCVVGGTRAIVLGGQTGEEWMLSELHELSLAS 610
>gi|253317651|gb|ACT22762.1| FKF1 [Allium cepa]
Length = 623
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/577 (68%), Positives = 466/577 (80%), Gaps = 21/577 (3%)
Query: 49 FYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPL 108
F + SFVV+DA +PDFPIIYVN VFE TGYRADEV+GRNCRFLQ+RDP+AQRRHPL
Sbjct: 66 FELRSSASFVVSDAMEPDFPIIYVNSVFEDSTGYRADEVIGRNCRFLQFRDPQAQRRHPL 125
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
VDP VVSEIR CLE+GIEFQGELLNF+KDGTPL+NRL L PI DDG VTHII IQIF+
Sbjct: 126 VDPTVVSEIRNCLEKGIEFQGELLNFRKDGTPLLNRLCLMPI-SDDGIVTHIIAIQIFTS 184
Query: 169 AKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRL 228
A ID NH+SYPVF++ ++ S S + C ILQLSDEVLAHN+LSRL
Sbjct: 185 ANIDPNHLSYPVFEQPSAKKPIPSK----------SSTEYPCCILQLSDEVLAHNVLSRL 234
Query: 229 TPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTL 288
TPRDVASIGSVC R+ +LT+NEH+R+MVC+NAWG ++ LE ++ LGWGRL+RELTTL
Sbjct: 235 TPRDVASIGSVCTRLHELTRNEHLRRMVCENAWGTDMARKLEPSSRTLGWGRLSRELTTL 294
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
EAV W+KFTV G VEPSRCNF ACA G+RLVLFGGEG++M+PMDDTFVL+L++ PEW R
Sbjct: 295 EAVTWKKFTVGGRVEPSRCNFGACAVGSRLVLFGGEGIDMRPMDDTFVLDLESPCPEWHR 354
Query: 349 VSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPL 408
+ V SSPPGRWGHTL+S+NGS L VFGGCGR GLLNDVFVLDLD+ QPTW V + P+
Sbjct: 355 LDVPSSPPGRWGHTLTSMNGSRLAVFGGCGRSGLLNDVFVLDLDSNQPTWKRVEAASAPV 414
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSL 468
PRSWH +C ++GS LVVSGGCT++GVLLSDT+ +DL ++PMW EI W P RLGH++
Sbjct: 415 PRSWHGACAVDGSTLVVSGGCTESGVLLSDTHSIDLDDERPMWVEIRAGWEPSPRLGHTV 474
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEE-PQWKQLECNAFTGVGSQSAVVPP 527
SVYGR ++LMFGGLA SG +RLRS E+Y +DLG + P+W++L GV PP
Sbjct: 475 SVYGRGRMLMFGGLASSGKMRLRSNEAYMMDLGGPDGPRWREL------GVVMPG---PP 525
Query: 528 PRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHS 587
PRLDHVAVS+PCGR+I+FGGSIAGLHSP QLF+LDPSEEKP+WRILNVPG+PPKFAWGHS
Sbjct: 526 PRLDHVAVSLPCGRVIVFGGSIAGLHSPVQLFMLDPSEEKPTWRILNVPGKPPKFAWGHS 585
Query: 588 TCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDSD 624
TCVVGGTRV+VLGG TGEEW+LNELHELCL S D D
Sbjct: 586 TCVVGGTRVIVLGGQTGEEWILNELHELCLTSSPDGD 622
>gi|242096866|ref|XP_002438923.1| hypothetical protein SORBIDRAFT_10g028340 [Sorghum bicolor]
gi|241917146|gb|EER90290.1| hypothetical protein SORBIDRAFT_10g028340 [Sorghum bicolor]
Length = 631
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/583 (67%), Positives = 468/583 (80%), Gaps = 13/583 (2%)
Query: 48 LFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP 107
+ + P VV DA +PD PIIYVN+ FE TGYRA+EVLGRNCRFLQ R P A+RRHP
Sbjct: 52 MLRASGPCGLVVTDALEPDCPIIYVNRGFEEATGYRAEEVLGRNCRFLQCRGPFARRRHP 111
Query: 108 LVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFS 167
LVD VVSEIRRC++ GIEF+G+LLNF+KDGTPL+NRL L PI DD T+TH +GIQ F+
Sbjct: 112 LVDAAVVSEIRRCIDNGIEFRGDLLNFRKDGTPLMNRLHLTPIYGDDETITHYMGIQFFT 171
Query: 168 EAKIDLNHVSYPVFKENCNQQY---DQSAQYFSGGHSPLSQHQDIC----GILQLSDEVL 220
+A +DL + + KE D S + S G +H + C + QL+DEVL
Sbjct: 172 DANVDLGPLPCSMTKEPVRSTRFAPDNSFRPISTG----PEHSNFCREYSSLFQLTDEVL 227
Query: 221 AHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGW 278
+ILSRL+PRD+AS+ SVCRR+ LT+NE + +MVCQNAWG E T ALE + ++LGW
Sbjct: 228 CQSILSRLSPRDIASVSSVCRRLYHLTRNEDLWRMVCQNAWGSETTRALETVPAARRLGW 287
Query: 279 GRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLN 338
GRLARELTTLEAV WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+
Sbjct: 288 GRLARELTTLEAVAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLD 347
Query: 339 LDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTW 398
L+A+NPEWR ++V ++PPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVF+LDLDAKQPTW
Sbjct: 348 LNASNPEWRHINVSAAPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFMLDLDAKQPTW 407
Query: 399 IEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSW 458
E+ G APP+PRSWHSSC ++G+KLVVSGGC D+GVLLSDTYLLD+T D+P+WRE+P SW
Sbjct: 408 REIPGVAPPVPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMDRPVWREVPASW 467
Query: 459 SPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGV 518
PPSRLGHS+SVYG K+LMFGGLAKSG LRLRS + YT+DL +EEP W+ L + G
Sbjct: 468 KPPSRLGHSMSVYGGRKILMFGGLAKSGPLRLRSSDVYTMDLSEEEPCWRCLTGSGMPGA 527
Query: 519 GSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ 578
G+ + PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL+LLDP+E+KP+WRILNVPG+
Sbjct: 528 GNPAGAGPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYLLDPTEDKPTWRILNVPGR 587
Query: 579 PPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
PP+FAWGHSTCVVGGT+ +VLGG TGEEW+L E+HEL LAS
Sbjct: 588 PPRFAWGHSTCVVGGTKAIVLGGQTGEEWMLTEIHELSLASNS 630
>gi|224126117|ref|XP_002329665.1| f-box family protein [Populus trichocarpa]
gi|222870546|gb|EEF07677.1| f-box family protein [Populus trichocarpa]
Length = 614
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/579 (68%), Positives = 466/579 (80%), Gaps = 15/579 (2%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P FVV DA +PD P+IYVN VFE+ TGYRA+EVLGRNC FLQ R P A+RRHPLVD
Sbjct: 39 TAPCGFVVTDALEPDHPLIYVNTVFEMATGYRAEEVLGRNCCFLQCRGPFAKRRHPLVDS 98
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
VVSEIRRCL+EGIEFQGELLNF+KDG+PL+NRL+L PI DD T+TH+IGIQ F+E I
Sbjct: 99 TVVSEIRRCLDEGIEFQGELLNFRKDGSPLMNRLQLTPIYGDDDTITHVIGIQFFTETNI 158
Query: 172 DLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH--------QDICGILQLSDEVLAHN 223
DL V KE+ + A F G S + ICGILQLSDEVL
Sbjct: 159 DLGPVPGSFVKESA-----KLADRFRSGLSTYRPFPAGDRNVCRGICGILQLSDEVLYLK 213
Query: 224 ILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRL 281
+LSRLTPRD+ASIGSVCR++ LTKNE + +MVCQNAWG E LE + K+LGWGRL
Sbjct: 214 VLSRLTPRDIASIGSVCRQLYALTKNEDLWRMVCQNAWGSETASVLETVPGAKRLGWGRL 273
Query: 282 ARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDA 341
ARELTTLEA WRK TV GAVEPSRCNFSACA GNR+VLFGGEGV+MQPM+DTFVL+L++
Sbjct: 274 ARELTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVDMQPMNDTFVLDLNS 333
Query: 342 ANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV 401
++PEW+ V V S PPGRWGHTLS +NGS LVVFGGCGRQGLLNDVFVLDLDAK PTW E+
Sbjct: 334 SSPEWQHVQVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLNDVFVLDLDAKPPTWREI 393
Query: 402 SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPP 461
SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP +W+PP
Sbjct: 394 SGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPIWREIPVAWTPP 453
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
SRLGH+LSVYG K+LMFGGLAKSG LR RS + +++DL +EEP W+ + + G G+
Sbjct: 454 SRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFSMDLSEEEPCWRCVTGSGMPGAGNP 513
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
+ PPPRLDHVA+S+P GRI+IFGGS+AGLHS SQL+LLDP++EKP+WRILNVPG+PP+
Sbjct: 514 GGIAPPPRLDHVAMSLPGGRILIFGGSVAGLHSASQLYLLDPTDEKPTWRILNVPGRPPR 573
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
FAWGHSTCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 574 FAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASS 612
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G +V++FGG G +++ +DL
Sbjct: 279 TLEAAAWRKLTVGGAVEPSRCNFSACAVG-NRVVLFGG---EGVDMQPMNDTFVLDLNSS 334
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ + Q + PP R H + +++FGG GL + +F+LD
Sbjct: 335 SPEWQHV----------QVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLN--DVFVLD 382
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 383 LDAKPPTWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 440
>gi|356530294|ref|XP_003533717.1| PREDICTED: adagio protein 1-like [Glycine max]
Length = 614
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/595 (66%), Positives = 476/595 (80%), Gaps = 14/595 (2%)
Query: 37 DDTELSLKPGLLFYP---TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCR 93
DD + ++ P L +P T P FVV DA +PD PIIYVN VFE+ TGYRA+EVLGRNCR
Sbjct: 21 DDDDDAVGP--LPFPVLQTAPCGFVVTDAVEPDHPIIYVNAVFEMVTGYRAEEVLGRNCR 78
Query: 94 FLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDD 153
FLQ R P A+RRHPLVD VVSEIRRCL+EG+EFQGELLNF+KDG+PL+NRLRL PI +
Sbjct: 79 FLQCRGPFAKRRHPLVDSTVVSEIRRCLDEGVEFQGELLNFRKDGSPLMNRLRLTPIYGE 138
Query: 154 DGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH---QDIC 210
D +TH+IGIQ F+EA IDL + KE+ + S P+ + IC
Sbjct: 139 D-EITHVIGIQFFTEANIDLGPLPGSTIKESTKSSDRFHSVLSSLNPVPVGDRNVTRGIC 197
Query: 211 GILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALE 270
GI QLSDEVL+ IL+RLTPRD+AS+GSVCR + +LTKNE + +MVCQNAWG E T LE
Sbjct: 198 GIFQLSDEVLSLKILARLTPRDIASVGSVCRHLYELTKNEDLWRMVCQNAWGSETTRVLE 257
Query: 271 LM--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNM 328
+ ++LGWGRLARELTTLEA WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNM
Sbjct: 258 TVPGARRLGWGRLARELTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNM 317
Query: 329 QPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFV 388
QPM+DTFVL+L+++NPEW+ V V S PPGRWGHTLS +NGS LVVFGGCG QGLLNDVFV
Sbjct: 318 QPMNDTFVLDLNSSNPEWQHVQVSSPPPGRWGHTLSCVNGSRLVVFGGCGTQGLLNDVFV 377
Query: 389 LDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDK 448
LDLDAK PTW E+SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +K
Sbjct: 378 LDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 437
Query: 449 PMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWK 508
P+WREIP +W+PPSRLGH+LSVYG K+LMFGGLAKSG LR RS + +T+DL +EEP W+
Sbjct: 438 PVWREIPVAWTPPSRLGHTLSVYGGRKILMFGGLAKSGALRFRSSDVFTMDLSEEEPCWR 497
Query: 509 QLECNAFTGV---GSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSE 565
+ + G+ G+ + PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL++LDP++
Sbjct: 498 CVTGSGLPGLPGTGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTD 557
Query: 566 EKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
EKP+WRILNVPG+PP+FAWGHSTCVVGGTR +V+GG TGEEW+L+ELHEL LAS
Sbjct: 558 EKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVMGGQTGEEWMLSELHELSLASS 612
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G +V++FGG G +++ +DL
Sbjct: 276 TLEAAAWRKLTVGGAVEPSRCNFSACAVG-NRVVLFGG---EGVNMQPMNDTFVLDLNSS 331
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ + Q + PP R H + R+++FGG GL + +F+LD
Sbjct: 332 NPEWQHV----------QVSSPPPGRWGHTLSCVNGSRLVVFGGCGTQGLLN--DVFVLD 379
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 380 LDAKPPTWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 437
>gi|357449333|ref|XP_003594943.1| PAS protein ZEITLUPE [Medicago truncatula]
gi|355483991|gb|AES65194.1| PAS protein ZEITLUPE [Medicago truncatula]
Length = 612
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/574 (66%), Positives = 462/574 (80%), Gaps = 5/574 (0%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P FVV DA DPD PIIYVN VFE+ TGYRA+EVLGRNCRFLQ R P A+RRHPLVD
Sbjct: 37 TAPCGFVVTDALDPDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDS 96
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
V+SEIR+C++EG+EFQGELLNF+KDG+PL+NRLRL PI +D +TH+IGIQ+F+EA I
Sbjct: 97 SVISEIRKCIDEGVEFQGELLNFRKDGSPLMNRLRLTPIYGEDDEITHVIGIQLFTEANI 156
Query: 172 DLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH---QDICGILQLSDEVLAHNILSRL 228
DL + KE+ + S PL + ICGI QLSDEVL+ IL+RL
Sbjct: 157 DLGPLPGSTIKESLKSSGRFHSVLSSLQPPPLGDRNVSRGICGIFQLSDEVLSLKILARL 216
Query: 229 TPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELT 286
TPRD+AS+ SVC R+ ++T+NE + +MVCQNAWG E T LE + K+LGWGRLARELT
Sbjct: 217 TPRDIASVSSVCTRLYEVTRNEDLWRMVCQNAWGSETTRVLETVPGAKRLGWGRLARELT 276
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
TLEA WRK TV G VEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L++ NPEW
Sbjct: 277 TLEAAAWRKLTVGGGVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSNNPEW 336
Query: 347 RRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
+ V V S PPGRWGHTLS +NGS LVVFGGCG QGLLNDVFVLDLDA PTW E+SG AP
Sbjct: 337 QHVQVSSPPPGRWGHTLSCVNGSRLVVFGGCGTQGLLNDVFVLDLDATPPTWREISGLAP 396
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGH 466
PLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLD++ + P+WREIP +W+PPSRLGH
Sbjct: 397 PLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDMSMENPVWREIPVTWTPPSRLGH 456
Query: 467 SLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVP 526
+LSVYG K+LMFGGLAKSG LR RS + +T+DL ++EP W+ + + G G+ + P
Sbjct: 457 TLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEDEPCWRCVTGSGMPGAGNPEGIAP 516
Query: 527 PPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGH 586
PPRLDHVAVS+P GRI+IFGGS+AGLHS SQL++LDP++EKP+WRILNVPG+PP+FAWGH
Sbjct: 517 PPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGH 576
Query: 587 STCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
STCVVGGTR +VLGG TGEEW+L++LHEL LA+
Sbjct: 577 STCVVGGTRAIVLGGQTGEEWMLSDLHELSLANS 610
>gi|297793261|ref|XP_002864515.1| hypothetical protein ARALYDRAFT_918910 [Arabidopsis lyrata subsp.
lyrata]
gi|297310350|gb|EFH40774.1| hypothetical protein ARALYDRAFT_918910 [Arabidopsis lyrata subsp.
lyrata]
Length = 609
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/593 (66%), Positives = 469/593 (79%), Gaps = 15/593 (2%)
Query: 37 DDTELSLKPGLLFYP--------TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVL 88
DD E L PG P T P FVV DA +PD PIIYVN VFE+ TGYRA+EVL
Sbjct: 19 DDEEGGLFPGGGPIPFPVGNLLHTAPCGFVVTDAVEPDHPIIYVNTVFEMVTGYRAEEVL 78
Query: 89 GRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLA 148
G NCRFLQ R P A+RRHPLVD +VVSEIR+C++EGIEFQGELLNF+KDG+PL+NRLRL
Sbjct: 79 GGNCRFLQCRGPFAKRRHPLVDSMVVSEIRKCIDEGIEFQGELLNFRKDGSPLMNRLRLT 138
Query: 149 PIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQD 208
PI DD T+THIIGIQ F E IDL V KE + D + G +S+
Sbjct: 139 PIYGDDDTITHIIGIQFFIETDIDLGPVLGSSTKE---KSIDGIYSALAAGERNVSR--G 193
Query: 209 ICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGA 268
+CG+ QLSDEV++ ILSRLTPRDVAS+ SVCRR+ LTKNE + + VCQNAWG E T
Sbjct: 194 MCGLFQLSDEVVSMKILSRLTPRDVASVSSVCRRLYVLTKNEDLWRRVCQNAWGSETTRV 253
Query: 269 LELM--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGV 326
LE + K+LGWGRLARELTTLEA WRK TV G+VEPSRCNFSACA GNR+VLFGGEGV
Sbjct: 254 LETVPGAKRLGWGRLARELTTLEAAAWRKLTVGGSVEPSRCNFSACAVGNRVVLFGGEGV 313
Query: 327 NMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDV 386
NMQPM+DTFVL+L++ PEW+ V V S PPGRWGHTLS +NGS LVVFGGCG+QGLLNDV
Sbjct: 314 NMQPMNDTFVLDLNSDYPEWQHVKVSSPPPGRWGHTLSCVNGSNLVVFGGCGQQGLLNDV 373
Query: 387 FVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT 446
FVL+LDAK PTW E+SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+
Sbjct: 374 FVLNLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSI 433
Query: 447 DKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQ 506
+KP+WREIP +W+PPSRLGH+LSVYG K+LMFGGLAKSG LR RS + +T+DL +EEP
Sbjct: 434 EKPVWREIPAAWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPC 493
Query: 507 WKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEE 566
W+ L + G G+ V PPPRLDHVAV++P GRI+IFGGS+AGLHS SQL+LLDP+E+
Sbjct: 494 WRCLTGSGMPGAGNPGGVAPPPRLDHVAVNLPGGRILIFGGSVAGLHSASQLYLLDPTED 553
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
KP+WRILN+PG+PP+FAWGH TCVVGGTR +VLGG TG+EW+L+ELHEL LAS
Sbjct: 554 KPTWRILNIPGRPPRFAWGHGTCVVGGTRAIVLGGQTGQEWMLSELHELSLAS 606
>gi|302818365|ref|XP_002990856.1| hypothetical protein SELMODRAFT_185596 [Selaginella moellendorffii]
gi|300141417|gb|EFJ08129.1| hypothetical protein SELMODRAFT_185596 [Selaginella moellendorffii]
Length = 587
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/575 (67%), Positives = 460/575 (80%), Gaps = 9/575 (1%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P S VV DA D DFPIIYVN +FE TGY+A+EVLGRNCRFLQ+R P AQRRHPLVD
Sbjct: 4 PCSVVVTDALDVDFPIIYVNNIFEFITGYKAEEVLGRNCRFLQFRGPFAQRRHPLVDSAT 63
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
V+EIRRC+ EGIEF GELLNF+KDGTPL+N+L L PIR +DG +THIIGIQ FSE K+DL
Sbjct: 64 VTEIRRCVGEGIEFWGELLNFRKDGTPLMNKLCLKPIRGEDGRITHIIGIQSFSEVKLDL 123
Query: 174 NHVSYPVFKENCNQQY-------DQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILS 226
+ P+++ +Q + D Y S P +D CGIL+LSDEVL IL+
Sbjct: 124 GPLPPPLWRNQSSQHWLVRRHLLDDGYSYASSPVGPGQSSKDRCGILRLSDEVLVQKILA 183
Query: 227 RLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARE 284
+LTPRDV+S+ VCRR ++TKN + ++VC+NAWGRE T LE + + + WG+LARE
Sbjct: 184 QLTPRDVSSVALVCRRFNEMTKNTDLWRLVCRNAWGRETTAVLERVHNPRSIDWGKLARE 243
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
LTTLEA WRK V GAVEPSRCNFSACA GN++VLFGGEGVNMQPM+DTFVL+L AA P
Sbjct: 244 LTTLEAAAWRKLKVGGAVEPSRCNFSACAVGNKVVLFGGEGVNMQPMNDTFVLDLSAACP 303
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
EWR V V S+PPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVFVLDLDAKQP+W EV+G
Sbjct: 304 EWRHVDVGSAPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPSWREVAGV 363
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
PP+PRSWHSSC ++G++LVV GGC D+GVLLSDTY+LD++ +KPMWREIP +W+PPSRL
Sbjct: 364 GPPVPRSWHSSCTLDGTQLVVYGGCADSGVLLSDTYMLDISKEKPMWREIPVAWTPPSRL 423
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
GHSLS YG K+L+FGGLAKSG LR RS +++TIDLG+EEP WK + + G +
Sbjct: 424 GHSLSAYGGRKILLFGGLAKSGPLRFRSSDAFTIDLGEEEPTWKYVTGSTLPGGANIGGT 483
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 584
PPPRLDHVAV++P GRI+IFGGSIAGLHS SQ++LLDPSEEKP+WR+LNVPGQ PKFAW
Sbjct: 484 TPPPRLDHVAVTLPGGRILIFGGSIAGLHSASQIYLLDPSEEKPTWRMLNVPGQKPKFAW 543
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
GHSTC VGGTR +VLGGHTGE+W+LNELHEL L+S
Sbjct: 544 GHSTCFVGGTRAVVLGGHTGEDWILNELHELSLSS 578
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 23/185 (12%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPM----DDTFVLNLDAANP 344
E WR+ V PSR S A G R +L G P+ D F ++L P
Sbjct: 406 EKPMWREIPV-AWTPPSRLGHSLSAYGGRKILLFGGLAKSGPLRFRSSDAFTIDLGEEEP 464
Query: 345 EWRRVSVKS----------SPPGRWGHTLSSLNGSWLVVFGGCGRQGL--LNDVFVLDLD 392
W+ V+ + +PP R H +L G +++FGG GL + +++LD
Sbjct: 465 TWKYVTGSTLPGGANIGGTTPPPRLDHVAVTLPGGRILIFGG-SIAGLHSASQIYLLDPS 523
Query: 393 AKQPTW--IEVSGGAPPLPRSW-HSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKP 449
++PTW + V G P +W HS+C + G++ VV GG T +L++ + L L++
Sbjct: 524 EEKPTWRMLNVPGQKPKF--AWGHSTCFVGGTRAVVLGGHTGEDWILNELHELSLSSTSQ 581
Query: 450 MWREI 454
R +
Sbjct: 582 WIRRL 586
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G KV++FGG G +++ +DL
Sbjct: 246 TLEAAAWRKLKVGGAVEPSRCNFSACAVG-NKVVLFGG---EGVNMQPMNDTFVLDLSAA 301
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ ++ VGS PP R H + +++FGG GL + +F+LD
Sbjct: 302 CPEWRHVD------VGS----APPGRWGHTLSCLNGSWLVVFGGCGRQGLLN--DVFVLD 349
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
++PSWR + G P +W HS+C + GT+++V GG +L++ + L ++ ++
Sbjct: 350 LDAKQPSWREVAGVGPPVPRSW-HSSCTLDGTQLVVYGGCADSGVLLSDTYMLDISKEK 407
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 497 TIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPS 556
+ID G + LE A+ + AV P R + A ++ ++++FGG + +
Sbjct: 234 SIDWGKLARELTTLEAAAWRKLKVGGAV-EPSRCNFSACAVG-NKVVLFGGEGVNMQPMN 291
Query: 557 QLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELC 616
F+LD S P WR ++V PP WGH+ + G+ ++V GG G + +LN++ L
Sbjct: 292 DTFVLDLSAACPEWRHVDVGSAPPG-RWGHTLSCLNGSWLVVFGG-CGRQGLLNDVFVLD 349
Query: 617 LASKQDS 623
L +KQ S
Sbjct: 350 LDAKQPS 356
>gi|115469678|ref|NP_001058438.1| Os06g0694000 [Oryza sativa Japonica Group]
gi|75252826|sp|Q5Z8K3.1|ADO1_ORYSJ RecName: Full=Adagio-like protein 1
gi|53792840|dbj|BAD53873.1| putative ZEITLUPE [Oryza sativa Japonica Group]
gi|113596478|dbj|BAF20352.1| Os06g0694000 [Oryza sativa Japonica Group]
gi|125556594|gb|EAZ02200.1| hypothetical protein OsI_24295 [Oryza sativa Indica Group]
gi|125598344|gb|EAZ38124.1| hypothetical protein OsJ_22473 [Oryza sativa Japonica Group]
Length = 630
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/572 (67%), Positives = 461/572 (80%), Gaps = 5/572 (0%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P VV DA +PD PIIYVN FE TGYRA+EVLGRNCRFLQ R P AQRRHPLVD +V
Sbjct: 57 PCGLVVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAMV 116
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
VSEIR+C++ G EF+G+LLNF+KDG+PL+N+L L PI DD T+TH +GIQ F+ A +DL
Sbjct: 117 VSEIRKCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETITHYMGIQFFTNANVDL 176
Query: 174 NHVSYPVFKENCNQQYDQSAQYF---SGGHSPLSQHQDICGILQLSDEVLAHNILSRLTP 230
+ + KE +F S G + ++ + QL+DEVL +ILSRL+P
Sbjct: 177 GPLPGSLTKEPVRSTRFTPDNFFRPISTGPGQSNFCREYSSLFQLTDEVLCQSILSRLSP 236
Query: 231 RDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELTTL 288
RD+AS+ SVCRR+ LT+NE + +MVCQNAWG E T ALE + K+LGWGRLARELTTL
Sbjct: 237 RDIASVSSVCRRLYLLTRNEDLWRMVCQNAWGSETTRALETVPAAKRLGWGRLARELTTL 296
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
EAV WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L+A+NPEWR
Sbjct: 297 EAVAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNPEWRH 356
Query: 349 VSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPL 408
V+V S+PPGRWGHTLS LNGS LVVFGGCGRQGLLNDVF LDLDAKQPTW E+ G APP+
Sbjct: 357 VNVSSAPPGRWGHTLSCLNGSLLVVFGGCGRQGLLNDVFTLDLDAKQPTWREIPGVAPPV 416
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSL 468
PRSWHSSC ++G+KLVVSGGC D+GVLLSDTYLLD+T DKP+WRE+P SW+PPSRLGHS+
Sbjct: 417 PRSWHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMDKPVWREVPASWTPPSRLGHSM 476
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPP 528
SVYG K+LMFGGLAKSG LRLRS + +T+DL +EEP W+ L + G G+ + PPP
Sbjct: 477 SVYGGRKILMFGGLAKSGPLRLRSSDVFTMDLSEEEPCWRCLTGSGMPGAGNPAGAGPPP 536
Query: 529 RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHST 588
RLDHVAVS+P GR++IFGGS+AGLHS SQL+LLDP+EEKP+WRILNVPG+PP+FAWGHST
Sbjct: 537 RLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPGRPPRFAWGHST 596
Query: 589 CVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
CVVGGT+ +VLGG TGEEW+L E+HEL LAS
Sbjct: 597 CVVGGTKAIVLGGQTGEEWMLTEIHELSLASS 628
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 28/182 (15%)
Query: 441 LLDLTTDKPMWREI-PTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTID 499
L LT ++ +WR + +W S +L K L +G LA+ E T+
Sbjct: 249 LYLLTRNEDLWRMVCQNAWG--SETTRALETVPAAKRLGWGRLAR---------ELTTL- 296
Query: 500 LGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLF 559
E W++L + V P R + A ++ R+++FGG + + F
Sbjct: 297 ---EAVAWRKL---------TVGGAVEPSRCNFSACAVG-NRVVLFGGEGVNMQPMNDTF 343
Query: 560 LLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
+LD + P WR +NV PP WGH+ + G+ ++V GG G + +LN++ L L +
Sbjct: 344 VLDLNASNPEWRHVNVSSAPPG-RWGHTLSCLNGSLLVVFGG-CGRQGLLNDVFTLDLDA 401
Query: 620 KQ 621
KQ
Sbjct: 402 KQ 403
>gi|18423971|ref|NP_568855.1| adagio protein 1 [Arabidopsis thaliana]
gi|81170304|sp|Q94BT6.2|ADO1_ARATH RecName: Full=Adagio protein 1; AltName: Full=Clock-associated PAS
protein ZTL; AltName: Full=F-box only protein 2b;
Short=FBX2b; AltName: Full=Flavin-binding kelch repeat
F-box protein 1-like protein 2; Short=FKF1-like protein
2; AltName: Full=LOV kelch protein 1; AltName:
Full=Protein ZEITLUPE
gi|6942045|gb|AAF32300.1|AF216525_1 FKF1-like protein 2 [Arabidopsis thaliana]
gi|7839456|gb|AAF70288.1|AF254413_1 clock-associated PAS protein ZTL [Arabidopsis thaliana]
gi|13487068|gb|AAK27433.1|AF252294_1 Adagio 1 [Arabidopsis thaliana]
gi|9757930|dbj|BAB08473.1| FKF1-like protein 2 [Arabidopsis thaliana]
gi|11610573|dbj|BAB18914.1| LOV kelch protein 1 [Arabidopsis thaliana]
gi|31711710|gb|AAP68211.1| At5g57360/MSF19_2 [Arabidopsis thaliana]
gi|332009508|gb|AED96891.1| adagio protein 1 [Arabidopsis thaliana]
Length = 609
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/593 (66%), Positives = 471/593 (79%), Gaps = 15/593 (2%)
Query: 37 DDTELSLKPG--LLFYP------TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVL 88
DD E L PG + YP T P FVV DA +PD PIIYVN VFE+ TGYRA+EVL
Sbjct: 19 DDEEGGLFPGGGPIPYPVGNLLHTAPCGFVVTDAVEPDQPIIYVNTVFEMVTGYRAEEVL 78
Query: 89 GRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLA 148
G NCRFLQ R P A+RRHPLVD +VVSEIR+C++EGIEFQGELLNF+KDG+PL+NRLRL
Sbjct: 79 GGNCRFLQCRGPFAKRRHPLVDSMVVSEIRKCIDEGIEFQGELLNFRKDGSPLMNRLRLT 138
Query: 149 PIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQD 208
PI DD T+THIIGIQ F E IDL V KE + D + G +S+
Sbjct: 139 PIYGDDDTITHIIGIQFFIETDIDLGPVLGSSTKE---KSIDGIYSALAAGERNVSR--G 193
Query: 209 ICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGA 268
+CG+ QLSDEV++ ILSRLTPRDVAS+ SVCRR+ LTKNE + + VCQNAWG E T
Sbjct: 194 MCGLFQLSDEVVSMKILSRLTPRDVASVSSVCRRLYVLTKNEDLWRRVCQNAWGSETTRV 253
Query: 269 LELM--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGV 326
LE + K+LGWGRLARELTTLEA WRK +V G+VEPSRCNFSACA GNR+VLFGGEGV
Sbjct: 254 LETVPGAKRLGWGRLARELTTLEAAAWRKLSVGGSVEPSRCNFSACAVGNRVVLFGGEGV 313
Query: 327 NMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDV 386
NMQPM+DTFVL+L++ PEW+ V V S PPGRWGHTL+ +NGS LVVFGGCG+QGLLNDV
Sbjct: 314 NMQPMNDTFVLDLNSDYPEWQHVKVSSPPPGRWGHTLTCVNGSNLVVFGGCGQQGLLNDV 373
Query: 387 FVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT 446
FVL+LDAK PTW E+SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+
Sbjct: 374 FVLNLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSI 433
Query: 447 DKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQ 506
+KP+WREIP +W+PPSRLGH+LSVYG K+LMFGGLAKSG L+ RS + +T+DL +EEP
Sbjct: 434 EKPVWREIPAAWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLKFRSSDVFTMDLSEEEPC 493
Query: 507 WKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEE 566
W+ + + G G+ V PPPRLDHVAV++P GRI+IFGGS+AGLHS SQL+LLDP+E+
Sbjct: 494 WRCVTGSGMPGAGNPGGVAPPPRLDHVAVNLPGGRILIFGGSVAGLHSASQLYLLDPTED 553
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
KP+WRILN+PG+PP+FAWGH TCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 554 KPTWRILNIPGRPPRFAWGHGTCVVGGTRAIVLGGQTGEEWMLSELHELSLAS 606
>gi|312282719|dbj|BAJ34225.1| unnamed protein product [Thellungiella halophila]
Length = 609
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/570 (68%), Positives = 460/570 (80%), Gaps = 7/570 (1%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P FVV DA +PD PIIYVN VFE+ TGYRA+EVLG NCRFLQ R P A+RRHPLVD
Sbjct: 42 TAPCGFVVTDAVEPDQPIIYVNTVFEMVTGYRAEEVLGGNCRFLQCRGPFAKRRHPLVDS 101
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
+VVSEIR+C++EGIEFQGELLNF KDG+PL+NRLRL PI DD T+THIIGIQ F E I
Sbjct: 102 MVVSEIRKCIDEGIEFQGELLNFSKDGSPLMNRLRLTPIYGDDDTITHIIGIQFFIETDI 161
Query: 172 DLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPR 231
DL V KE + D + +S+ +CG+ QLSDEV++ ILSRLTPR
Sbjct: 162 DLGPVQGSSTKE---KSIDGIYSALAAAERNVSR--GMCGLFQLSDEVVSMKILSRLTPR 216
Query: 232 DVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELTTLE 289
DVAS+ SVCRR+ LTKNE + + VCQNAWG E T LE + K+LGWGRLARELTTLE
Sbjct: 217 DVASVSSVCRRLYVLTKNEDLWRRVCQNAWGSETTRVLETVPGAKRLGWGRLARELTTLE 276
Query: 290 AVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRV 349
A WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L++ PEW+ V
Sbjct: 277 AAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSDFPEWQHV 336
Query: 350 SVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLP 409
V S PPGRWGHTL+ +NGS LVVFGGCG+QGLLNDVFVL+LDAK P+W E+SG APPLP
Sbjct: 337 KVSSPPPGRWGHTLTCVNGSNLVVFGGCGQQGLLNDVFVLNLDAKPPSWREISGLAPPLP 396
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLS 469
RSWHSSC ++GSKL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP +W+PPSRLGH+LS
Sbjct: 397 RSWHSSCTLDGSKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPAAWTPPSRLGHTLS 456
Query: 470 VYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPR 529
VYG K+LMFGGLAKSG LR RS + +T+DL +EEP W+ + + G G+ V PPPR
Sbjct: 457 VYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMPGAGNPGGVAPPPR 516
Query: 530 LDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTC 589
LDHVAV++P GRI+IFGGS+AGLHS SQL+LLDP+EEKP+WRILN+PG+PP+FAWGH TC
Sbjct: 517 LDHVAVNLPGGRILIFGGSVAGLHSASQLYLLDPTEEKPTWRILNIPGRPPRFAWGHGTC 576
Query: 590 VVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
VVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 577 VVGGTRAIVLGGQTGEEWMLSELHELSLAS 606
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G +V++FGG G +++ +DL +
Sbjct: 274 TLEAAAWRKLTVGGAVEPSRCNFSACAVG-NRVVLFGG---EGVNMQPMNDTFVLDLNSD 329
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ ++ ++ PP R H + +++FGG GL + +F+L+
Sbjct: 330 FPEWQHVKVSS----------PPPGRWGHTLTCVNGSNLVVFGGCGQQGLLN--DVFVLN 377
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ PSWR ++ P +W HS+C + G++++V GG +L++ L L+ ++
Sbjct: 378 LDAKPPSWREISGLAPPLPRSW-HSSCTLDGSKLIVSGGCADSGVLLSDTFLLDLSMEK 435
>gi|302785129|ref|XP_002974336.1| hypothetical protein SELMODRAFT_174189 [Selaginella moellendorffii]
gi|300157934|gb|EFJ24558.1| hypothetical protein SELMODRAFT_174189 [Selaginella moellendorffii]
Length = 587
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/575 (67%), Positives = 458/575 (79%), Gaps = 9/575 (1%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P S VV DA D DFPIIYVN +FE TGY+A+EVLGRNCRFLQ+R P AQRRHPLVD
Sbjct: 4 PCSVVVTDALDVDFPIIYVNNIFEFITGYKAEEVLGRNCRFLQFRGPFAQRRHPLVDSAT 63
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
V+EIRRC+ EGIEF GELLNF+KDGTPL+N+L L PIR +DG +THIIGIQ FSE K+DL
Sbjct: 64 VTEIRRCMREGIEFWGELLNFRKDGTPLMNKLCLKPIRGEDGRITHIIGIQSFSEVKLDL 123
Query: 174 NHVSYPVFKENCNQQY-------DQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILS 226
+ P+++ +Q + D Y S P +D CGIL+LSDEVL IL+
Sbjct: 124 GPLPPPLWRNQSSQHWLVRRHLLDDGYSYASSPVGPGQSSKDRCGILRLSDEVLVQKILA 183
Query: 227 RLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARE 284
+LTPRDV+S+ VCRR ++TKN + ++VC+NAWG E T LE + + + WG LARE
Sbjct: 184 QLTPRDVSSVALVCRRFNEMTKNTDLWRLVCRNAWGLETTAVLERVHNPRSIDWGMLARE 243
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
LTTLEA WRK V GAVEPSRCNFSACA GN++VLFGGEGVNMQPM+DTFVL+L AA P
Sbjct: 244 LTTLEAAAWRKLKVGGAVEPSRCNFSACAVGNKVVLFGGEGVNMQPMNDTFVLDLSAACP 303
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
EWR V V S+PPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVFVLDLDAKQP+W EV+G
Sbjct: 304 EWRHVDVGSAPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPSWREVAGV 363
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
PP+PRSWHSSC ++G++LVV GGC D+GVLLSDTY+LD++ +KPMWREIP +W+PPSRL
Sbjct: 364 GPPVPRSWHSSCTLDGTQLVVYGGCADSGVLLSDTYMLDISKEKPMWREIPVAWTPPSRL 423
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
GHSLS YG K+L+FGGLAKSG LR RS +++TIDLG+EEP WK + + G +
Sbjct: 424 GHSLSAYGGRKILLFGGLAKSGPLRFRSSDAFTIDLGEEEPTWKYVTGSTLPGGANIGGT 483
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 584
PPPRLDHVAV++P GRI+IFGGSIAGLHS SQ++LLDPSEEKP+WR+LNVPGQ PKFAW
Sbjct: 484 TPPPRLDHVAVTLPGGRILIFGGSIAGLHSASQIYLLDPSEEKPTWRMLNVPGQKPKFAW 543
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
GHSTC VGGTR +VLGGHTGE+W+LNELHEL L+S
Sbjct: 544 GHSTCFVGGTRAVVLGGHTGEDWILNELHELSLSS 578
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 23/185 (12%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPM----DDTFVLNLDAANP 344
E WR+ V PSR S A G R +L G P+ D F ++L P
Sbjct: 406 EKPMWREIPV-AWTPPSRLGHSLSAYGGRKILLFGGLAKSGPLRFRSSDAFTIDLGEEEP 464
Query: 345 EWRRVSVKS----------SPPGRWGHTLSSLNGSWLVVFGGCGRQGL--LNDVFVLDLD 392
W+ V+ + +PP R H +L G +++FGG GL + +++LD
Sbjct: 465 TWKYVTGSTLPGGANIGGTTPPPRLDHVAVTLPGGRILIFGG-SIAGLHSASQIYLLDPS 523
Query: 393 AKQPTW--IEVSGGAPPLPRSW-HSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKP 449
++PTW + V G P +W HS+C + G++ VV GG T +L++ + L L++
Sbjct: 524 EEKPTWRMLNVPGQKPKF--AWGHSTCFVGGTRAVVLGGHTGEDWILNELHELSLSSTSQ 581
Query: 450 MWREI 454
R +
Sbjct: 582 WIRRL 586
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G KV++FGG G +++ +DL
Sbjct: 246 TLEAAAWRKLKVGGAVEPSRCNFSACAVG-NKVVLFGG---EGVNMQPMNDTFVLDLSAA 301
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ ++ VGS PP R H + +++FGG GL + +F+LD
Sbjct: 302 CPEWRHVD------VGS----APPGRWGHTLSCLNGSWLVVFGGCGRQGLLN--DVFVLD 349
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
++PSWR + G P +W HS+C + GT+++V GG +L++ + L ++ ++
Sbjct: 350 LDAKQPSWREVAGVGPPVPRSW-HSSCTLDGTQLVVYGGCADSGVLLSDTYMLDISKEK 407
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 497 TIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPS 556
+ID G + LE A+ + AV P R + A ++ ++++FGG + +
Sbjct: 234 SIDWGMLARELTTLEAAAWRKLKVGGAV-EPSRCNFSACAVG-NKVVLFGGEGVNMQPMN 291
Query: 557 QLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELC 616
F+LD S P WR ++V PP WGH+ + G+ ++V GG G + +LN++ L
Sbjct: 292 DTFVLDLSAACPEWRHVDVGSAPPG-RWGHTLSCLNGSWLVVFGG-CGRQGLLNDVFVLD 349
Query: 617 LASKQDS 623
L +KQ S
Sbjct: 350 LDAKQPS 356
>gi|413943267|gb|AFW75916.1| hypothetical protein ZEAMMB73_046661 [Zea mays]
Length = 630
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/583 (65%), Positives = 461/583 (79%), Gaps = 13/583 (2%)
Query: 48 LFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP 107
+ + P VV DA +PD PIIY N+ FE TGYRA+E LGRNCRFLQ R P A+RRHP
Sbjct: 51 MLRASGPCGLVVTDALEPDCPIIYANRGFEEATGYRAEEFLGRNCRFLQCRGPFARRRHP 110
Query: 108 LVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFS 167
LV+ VVSEI+RC+ IEF+G+LLNF+KDG+PL+NRL L PI DD T+TH +GIQ F+
Sbjct: 111 LVNAAVVSEIQRCINNSIEFRGDLLNFRKDGSPLMNRLHLTPIYGDDETITHYMGIQFFT 170
Query: 168 EAKIDLNHVSYPVFKENCNQQY---DQSAQYFSGGHSPLSQHQDIC----GILQLSDEVL 220
+A +DL + P+ KE D S + S G +H + C + QL+DEVL
Sbjct: 171 DANVDLGPLPCPMTKEPVRSTRFAPDNSFRPISAG----PEHSNFCREYSSLFQLTDEVL 226
Query: 221 AHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGW 278
+ILSRLTPRD+AS+ SVCR + LT+NE + +MVCQNAWG E T ALE + ++LGW
Sbjct: 227 CQSILSRLTPRDIASVSSVCRCLYHLTRNEDLWRMVCQNAWGSETTRALETVPAARRLGW 286
Query: 279 GRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLN 338
GRLARELTTLEAV WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+
Sbjct: 287 GRLARELTTLEAVAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLD 346
Query: 339 LDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTW 398
L+A+NPEWR ++V ++PPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVF+LDLDAKQPTW
Sbjct: 347 LNASNPEWRHINVSAAPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFMLDLDAKQPTW 406
Query: 399 IEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSW 458
E+ G APP+PRSWHSSC ++G+KLVVSGGC D+GVLLSDTYLLD+T D+P+WRE+P SW
Sbjct: 407 REIPGVAPPVPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMDRPVWREVPASW 466
Query: 459 SPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGV 518
PPSRLGHS+SVY K+LMFGGLAKSG LRLRS + YT+DL +EEP W+ L + G
Sbjct: 467 KPPSRLGHSMSVYDGRKILMFGGLAKSGPLRLRSSDVYTMDLSEEEPCWRCLTGSGMPGA 526
Query: 519 GSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ 578
G+ + PPPRLDHV VS+P GRI+IFGGS+AGLHS SQL+LLDP+EEKP+WRIL+VPG
Sbjct: 527 GNPAGAGPPPRLDHVGVSLPGGRILIFGGSVAGLHSASQLYLLDPTEEKPTWRILSVPGH 586
Query: 579 PPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
PP+FAWGHSTCVVGGT+ +VLGG TGEEW+L E+HEL LA+
Sbjct: 587 PPRFAWGHSTCVVGGTKAIVLGGQTGEEWMLTEIHELSLANNS 629
>gi|326495418|dbj|BAJ85805.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/573 (66%), Positives = 458/573 (79%), Gaps = 5/573 (0%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P VV DA +PD PIIYVN+ FE TGYRA+EVLGRNCRFLQ R P AQRRHPLVD V
Sbjct: 26 PYGLVVTDALEPDCPIIYVNRGFEDATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDDAV 85
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
VS I+RC++ G +F+G+LLNF+KDG PL+NRL L PI DD +TH +GIQ F+ A +DL
Sbjct: 86 VSGIQRCIDNGTQFRGDLLNFRKDGFPLMNRLHLTPIYGDDDIITHYMGIQFFTNANVDL 145
Query: 174 NHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH---QDICGILQLSDEVLAHNILSRLTP 230
V V +E +F + L Q ++ + QL+DEVL +ILSRL+P
Sbjct: 146 GPVPGSVTREPVRSTRFAPDNFFRPITTGLEQDNFCREYSSLFQLTDEVLCQSILSRLSP 205
Query: 231 RDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELTTL 288
RDVAS+ SVCRR+ LTKNE + +MVC+NAWG E T ALE + K+LGWGRLARELTTL
Sbjct: 206 RDVASVSSVCRRLYDLTKNEDLWRMVCRNAWGSETTQALETVPAAKRLGWGRLARELTTL 265
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
EAV WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L+A+NPEWR
Sbjct: 266 EAVAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNPEWRH 325
Query: 349 VSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPL 408
V+V S+PPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVF+LDLDAK PTW E+ G APP+
Sbjct: 326 VNVSSAPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFMLDLDAKHPTWREIPGVAPPV 385
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSL 468
PRSWHSSC ++G+KLVVSGGC D+GVLLSDT+LLD++ D+P+WRE+P SW+PPSRLGHS+
Sbjct: 386 PRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLDVSMDRPVWREVPASWTPPSRLGHSM 445
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPP 528
SVY K+LMFGGLAKSG LRLRS + +T+DL +EEP W+ L + G G+ + PPP
Sbjct: 446 SVYDGRKILMFGGLAKSGPLRLRSSDVFTMDLSEEEPCWRCLTGSGMPGAGNPAGAGPPP 505
Query: 529 RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHST 588
RLDHVAVS+P GR++IFGGS+AGLHS SQL+LLDP+EEKP+WRILNVPG+PP+FAWGHST
Sbjct: 506 RLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPGRPPRFAWGHST 565
Query: 589 CVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
CVVGGT+ +VLGG TGEEW+L E+HEL LAS
Sbjct: 566 CVVGGTKAIVLGGQTGEEWMLTEVHELSLASSN 598
>gi|326488147|dbj|BAJ89912.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527905|dbj|BAJ89004.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 650
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/573 (66%), Positives = 458/573 (79%), Gaps = 5/573 (0%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P VV DA +PD PIIYVN+ FE TGYRA+EVLGRNCRFLQ R P AQRRHPLVD V
Sbjct: 76 PYGLVVTDALEPDCPIIYVNRGFEDATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDDAV 135
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
VS I+RC++ G +F+G+LLNF+KDG PL+NRL L PI DD +TH +GIQ F+ A +DL
Sbjct: 136 VSGIQRCIDNGTQFRGDLLNFRKDGFPLMNRLHLTPIYGDDDIITHYMGIQFFTNANVDL 195
Query: 174 NHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH---QDICGILQLSDEVLAHNILSRLTP 230
V V +E +F + L Q ++ + QL+DEVL +ILSRL+P
Sbjct: 196 GPVPGSVTREPVRSTRFAPDNFFRPITTGLEQDNFCREYSSLFQLTDEVLCQSILSRLSP 255
Query: 231 RDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELTTL 288
RDVAS+ SVCRR+ LTKNE + +MVC+NAWG E T ALE + K+LGWGRLARELTTL
Sbjct: 256 RDVASVSSVCRRLYDLTKNEDLWRMVCRNAWGSETTQALETVPAAKRLGWGRLARELTTL 315
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
EAV WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L+A+NPEWR
Sbjct: 316 EAVAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNPEWRH 375
Query: 349 VSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPL 408
V+V S+PPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVF+LDLDAK PTW E+ G APP+
Sbjct: 376 VNVSSAPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFMLDLDAKHPTWREIPGVAPPV 435
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSL 468
PRSWHSSC ++G+KLVVSGGC D+GVLLSDT+LLD++ D+P+WRE+P SW+PPSRLGHS+
Sbjct: 436 PRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLDVSMDRPVWREVPASWTPPSRLGHSM 495
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPP 528
SVY K+LMFGGLAKSG LRLRS + +T+DL +EEP W+ L + G G+ + PPP
Sbjct: 496 SVYDGRKILMFGGLAKSGPLRLRSSDVFTMDLSEEEPCWRCLTGSGMPGAGNPAGAGPPP 555
Query: 529 RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHST 588
RLDHVAVS+P GR++IFGGS+AGLHS SQL+LLDP+EEKP+WRILNVPG+PP+FAWGHST
Sbjct: 556 RLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPGRPPRFAWGHST 615
Query: 589 CVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
CVVGGT+ +VLGG TGEEW+L E+HEL LAS
Sbjct: 616 CVVGGTKAIVLGGQTGEEWMLTEVHELSLASSN 648
>gi|149981048|gb|ABR53778.1| flavin-binding kelch repeat F-box 1 [Phaseolus vulgaris]
Length = 435
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/435 (88%), Positives = 403/435 (92%), Gaps = 1/435 (0%)
Query: 136 KDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQY 195
KDGTPLVNRLRLAPI DDDGTVTH+IGIQ+FSEA IDLN VSYPVFKE CNQ++D++ +Y
Sbjct: 1 KDGTPLVNRLRLAPIHDDDGTVTHVIGIQLFSEANIDLNRVSYPVFKETCNQEFDKNGEY 60
Query: 196 F-SGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRK 254
G SQ Q++CGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRK
Sbjct: 61 SPKSGQCLYSQQQEMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRK 120
Query: 255 MVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAA 314
MVCQNAWG+EVTG LELMTKKLGWGRL RELTTLEAVCWRK TV GAVEPSRCNFSACAA
Sbjct: 121 MVCQNAWGKEVTGTLELMTKKLGWGRLTRELTTLEAVCWRKMTVGGAVEPSRCNFSACAA 180
Query: 315 GNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVF 374
GNRLVLFGGEGV+MQPMDDTFVLNLDA NPEWRRV VKSSPPGRWGHTLS LNGSWLVVF
Sbjct: 181 GNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVIVKSSPPGRWGHTLSCLNGSWLVVF 240
Query: 375 GGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGV 434
GGCGRQGLLNDVFVLDLDA+QPTW EV GG PPLPRSWHSSC IEGSKLVVSGGCTDAGV
Sbjct: 241 GGCGRQGLLNDVFVLDLDAQQPTWREVCGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGV 300
Query: 435 LLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGE 494
LLSDTYLLDLT D P WREIPTSW+PPSRLGHSLSVYGRTK+LMFGGLAKSGHLRLRSGE
Sbjct: 301 LLSDTYLLDLTIDNPTWREIPTSWAPPSRLGHSLSVYGRTKLLMFGGLAKSGHLRLRSGE 360
Query: 495 SYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHS 554
+YTIDL DEEPQW+QLE +AFTG+ SQS VVPPPRLDHVAVSMPCGRIIIFGGSIAGLHS
Sbjct: 361 AYTIDLEDEEPQWRQLEYSAFTGLASQSGVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHS 420
Query: 555 PSQLFLLDPSEEKPS 569
PSQLFLLDPSEEKPS
Sbjct: 421 PSQLFLLDPSEEKPS 435
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 398 WIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS 457
W +++ G P + S G++LV+ GG + DT++L+L P WR +
Sbjct: 159 WRKMTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVIVK 218
Query: 458 WSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTG 517
SPP R GH+LS + +++FGG + G L + + +DL ++P W+++ C
Sbjct: 219 SSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLN----DVFVLDLDAQQPTWREV-CGG--- 270
Query: 518 VGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPG 577
P PR H + ++ ++++ GG S +LLD + + P+WR +
Sbjct: 271 ------TPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDNPTWREIPTSW 324
Query: 578 QPPKFAWGHSTCVVGGTRVLVLGG 601
PP GHS V G T++L+ GG
Sbjct: 325 APPS-RLGHSLSVYGRTKLLMFGG 347
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G ++++FGG G +++ ++L +
Sbjct: 153 TLEAVCWRKMTVGGAVEPSRCNFSACAAG-NRLVLFGG---EGVDMQPMDDTFVLNLDAK 208
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+++ + PP R H + +++FGG GL + +F+LD
Sbjct: 209 NPEWRRVIVKS----------SPPGRWGHTLSCLNGSWLVVFGGCGRQGLLN--DVFVLD 256
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLA 618
++P+WR + G PP HS+C + G++++V GG T +L++ + L L
Sbjct: 257 LDAQQPTWREV-CGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLT 311
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 523 AVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKF 582
V P R + A + R+++FGG + F+L+ + P WR + V PP
Sbjct: 166 GAVEPSRCNFSACAAG-NRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVIVKSSPPG- 223
Query: 583 AWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
WGH+ + G+ ++V GG G + +LN++ L L ++Q
Sbjct: 224 RWGHTLSCLNGSWLVVFGG-CGRQGLLNDVFVLDLDAQQ 261
>gi|149981052|gb|ABR53780.1| flavin-binding kelch repeat F-box 1 [Phaseolus vulgaris]
Length = 436
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/435 (88%), Positives = 403/435 (92%), Gaps = 1/435 (0%)
Query: 136 KDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQY 195
KDGTPLVNRLRLAPI DDDGTVTH+IGIQ+FSEA IDLN VSYPVFKE CNQ++D++ +Y
Sbjct: 1 KDGTPLVNRLRLAPIHDDDGTVTHVIGIQLFSEANIDLNRVSYPVFKETCNQEFDKNGEY 60
Query: 196 F-SGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRK 254
G SQ Q++CGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRK
Sbjct: 61 SPKSGQCLYSQQQEMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRK 120
Query: 255 MVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAA 314
MVCQNAWG+EVTG LELMTKKLGWGRL RELTTLEAVCWRK TV GAVEPSRCNFSACAA
Sbjct: 121 MVCQNAWGKEVTGTLELMTKKLGWGRLTRELTTLEAVCWRKMTVGGAVEPSRCNFSACAA 180
Query: 315 GNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVF 374
GNRLVLFGGEGV+MQPMDDTFVLNLDA NPEWRRV VKSSPPGRWGHTLS LNGSWLVVF
Sbjct: 181 GNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVIVKSSPPGRWGHTLSCLNGSWLVVF 240
Query: 375 GGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGV 434
GGCGRQGLLNDVFVLDLDA+QPTW EV GG PPLPRSWHSSC IEGSKLVVSGGCTDAGV
Sbjct: 241 GGCGRQGLLNDVFVLDLDAQQPTWREVCGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGV 300
Query: 435 LLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGE 494
LLSDTYLLDLT D P WREIPTSW+PPSRLGHSLSVYGRTK+LMFGGLAKSGHLRLRSGE
Sbjct: 301 LLSDTYLLDLTIDNPTWREIPTSWAPPSRLGHSLSVYGRTKLLMFGGLAKSGHLRLRSGE 360
Query: 495 SYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHS 554
+YTIDL DEEPQW+QLE +AFTG+ SQS VVPPPRLDHVAVSMPCGRIIIFGGSIAGLHS
Sbjct: 361 AYTIDLEDEEPQWRQLEYSAFTGLASQSGVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHS 420
Query: 555 PSQLFLLDPSEEKPS 569
PSQLFLLDPSEEKPS
Sbjct: 421 PSQLFLLDPSEEKPS 435
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 398 WIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS 457
W +++ G P + S G++LV+ GG + DT++L+L P WR +
Sbjct: 159 WRKMTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVIVK 218
Query: 458 WSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTG 517
SPP R GH+LS + +++FGG + G L + + +DL ++P W+++ C
Sbjct: 219 SSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLN----DVFVLDLDAQQPTWREV-CGG--- 270
Query: 518 VGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPG 577
P PR H + ++ ++++ GG S +LLD + + P+WR +
Sbjct: 271 ------TPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDNPTWREIPTSW 324
Query: 578 QPPKFAWGHSTCVVGGTRVLVLGG 601
PP GHS V G T++L+ GG
Sbjct: 325 APPS-RLGHSLSVYGRTKLLMFGG 347
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G ++++FGG G +++ ++L +
Sbjct: 153 TLEAVCWRKMTVGGAVEPSRCNFSACAAG-NRLVLFGG---EGVDMQPMDDTFVLNLDAK 208
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+++ + PP R H + +++FGG GL + +F+LD
Sbjct: 209 NPEWRRVIVKS----------SPPGRWGHTLSCLNGSWLVVFGGCGRQGLLN--DVFVLD 256
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLA 618
++P+WR + G PP HS+C + G++++V GG T +L++ + L L
Sbjct: 257 LDAQQPTWREV-CGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLT 311
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 523 AVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKF 582
V P R + A + R+++FGG + F+L+ + P WR + V PP
Sbjct: 166 GAVEPSRCNFSACAAG-NRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVIVKSSPPG- 223
Query: 583 AWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
WGH+ + G+ ++V GG G + +LN++ L L ++Q
Sbjct: 224 RWGHTLSCLNGSWLVVFGG-CGRQGLLNDVFVLDLDAQQ 261
>gi|14532556|gb|AAK64006.1| AT5g57360/MSF19_2 [Arabidopsis thaliana]
Length = 609
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/593 (66%), Positives = 468/593 (78%), Gaps = 15/593 (2%)
Query: 37 DDTELSLKPG--LLFYP------TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVL 88
DD E L PG + YP T P FVV DA +PD PIIYVN VFE+ TGYRA+EVL
Sbjct: 19 DDEEGGLFPGGGPIPYPVGNLLHTAPCGFVVTDAVEPDQPIIYVNTVFEMVTGYRAEEVL 78
Query: 89 GRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLA 148
G NCRFLQ R P A+RRHPLVD +VVSEIR+C++EGIEFQGELLNF+KDG+PL+NRLRL
Sbjct: 79 GGNCRFLQCRGPFAKRRHPLVDSMVVSEIRKCIDEGIEFQGELLNFRKDGSPLMNRLRLT 138
Query: 149 PIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQD 208
PI DD T+THIIGIQ F E IDL V KE + D + G +S+
Sbjct: 139 PIYGDDDTITHIIGIQFFIETDIDLGPVLGSSTKE---KSIDGIYSALAAGERNVSR--G 193
Query: 209 ICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGA 268
+CG+ QLSDEV++ ILSRLTPRDVAS+ SVCRR+ LTKNE + + VCQNAWG E T
Sbjct: 194 MCGLFQLSDEVVSMKILSRLTPRDVASVSSVCRRLYVLTKNEDLWRRVCQNAWGSETTRV 253
Query: 269 LELM--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGV 326
LE + K+LGWGRLARELTTLEA WRK +V G+VEPSRCNFSACA GNR+VLFGGEGV
Sbjct: 254 LETVPGAKRLGWGRLARELTTLEAAAWRKLSVGGSVEPSRCNFSACAVGNRVVLFGGEGV 313
Query: 327 NMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDV 386
NMQPM+DTFVL+L++ PEW+ V V S PPGRWGHTL+ +NGS LVVFGGCG+QGLLNDV
Sbjct: 314 NMQPMNDTFVLDLNSDYPEWQHVKVSSPPPGRWGHTLTCVNGSNLVVFGGCGQQGLLNDV 373
Query: 387 FVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT 446
FVL+LDAK PTW E+SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+
Sbjct: 374 FVLNLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSI 433
Query: 447 DKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQ 506
+KP+WREIP +W+PPSRLGH+LSVYG + L GGLAKSG L+ RS + +T+DL +EEP
Sbjct: 434 EKPVWREIPAAWTPPSRLGHTLSVYGGRRNLDVGGLAKSGPLKFRSSDVFTMDLSEEEPC 493
Query: 507 WKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEE 566
W+ + + G G+ V PPPRLDHVAV++P GRI+IFGGS+AGLHS SQL+LLDP+E+
Sbjct: 494 WRCVTGSGMPGAGNPGGVAPPPRLDHVAVNLPGGRILIFGGSVAGLHSASQLYLLDPTED 553
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
KP+WRILN+PG+PP+FAWGH TCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 554 KPTWRILNIPGRPPRFAWGHGTCVVGGTRAIVLGGQTGEEWMLSELHELSLAS 606
>gi|225429780|ref|XP_002282699.1| PREDICTED: adagio protein 1-like isoform 2 [Vitis vinifera]
Length = 603
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/574 (67%), Positives = 458/574 (79%), Gaps = 16/574 (2%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P FVV+DA +PDFPIIYVN FE+ TGYRA+E+LG P A+RRH LVD
Sbjct: 37 TAPCGFVVSDALEPDFPIIYVNTGFELVTGYRAEEILG----------PFAKRRHQLVDS 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
VVSEIRRCLE G+EFQG+LLNF+KDG+PL+NRLRL PI DD T+TH+IGIQ F+EA +
Sbjct: 87 TVVSEIRRCLELGVEFQGDLLNFRKDGSPLMNRLRLTPIYGDDKTITHVIGIQFFTEANL 146
Query: 172 DLNHVSYPVFKENCNQQYDQSAQYFSGGHSP---LSQHQDICGILQLSDEVLAHNILSRL 228
DL + V KE+ S+ S P ++ ++C + QLSDEVL+H ILSRL
Sbjct: 147 DLGPLPGSVTKESYRSFDRFSSDLMSSRSIPSGSVNAGHEVCEMFQLSDEVLSHKILSRL 206
Query: 229 TPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELT 286
TPRD+AS+ SVC+R+ QLTKNE + ++VCQNAWG E T LE + K+LGW RLARELT
Sbjct: 207 TPRDIASVASVCKRLYQLTKNEDLWRLVCQNAWGCETTRVLETVPGAKRLGWVRLARELT 266
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
TLEA WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L+A NPEW
Sbjct: 267 TLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNATNPEW 326
Query: 347 RRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
+ V V S PPGRWGHTLS +N S LVVFGGCGRQGLLNDVFVLDLDAK PTW E+SG AP
Sbjct: 327 QHVKVSSPPPGRWGHTLSCVNDSLLVVFGGCGRQGLLNDVFVLDLDAKHPTWREISGLAP 386
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT-DKPMWREIPTSWSPPSRLG 465
PLPRSWHSSC ++G+KLVVSGGC D+GVLLSDT+LLDL T +KP+WREIP +W+PPSRLG
Sbjct: 387 PLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLDLATIEKPVWREIPVAWTPPSRLG 446
Query: 466 HSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVV 525
HSLSVYG K+LMFGGLAKSG LR RS + +T+DL +EEP W+ + + G G+ +
Sbjct: 447 HSLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMPGSGNPAGTA 506
Query: 526 PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWG 585
PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQ +LLDP++EKP+WRILNVPG+PP+FAWG
Sbjct: 507 PPPRLDHVAVSLPGGRILIFGGSVAGLHSASQSYLLDPTDEKPTWRILNVPGRPPRFAWG 566
Query: 586 HSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
HSTCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 567 HSTCVVGGTRAIVLGGQTGEEWMLSELHELSLAS 600
>gi|253317653|gb|ACT22763.1| ZEITLUPE [Allium cepa]
Length = 612
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/580 (66%), Positives = 460/580 (79%), Gaps = 21/580 (3%)
Query: 52 TTPTSF--VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ P S+ VV DA + D PIIYVN+ FE TGYRA+EVLGRNCRFLQ R P AQRRHPLV
Sbjct: 38 SIPASYGLVVTDAIEIDNPIIYVNEGFEKGTGYRAEEVLGRNCRFLQCRGPFAQRRHPLV 97
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEA 169
D V SEIR+C+E G+ FQG++LNFKKDG+P++NRL+L+PI DD VTH +GIQ +EA
Sbjct: 98 DSAVTSEIRKCIESGLSFQGDILNFKKDGSPVMNRLQLSPIFGDDDEVTHYLGIQFVTEA 157
Query: 170 KIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSP----LSQHQDICGILQLSDEVLAHNIL 225
IDL S F GG SP + ++ C + QLSDEVL+H I+
Sbjct: 158 NIDLGLPSPSPFSIEER-----------GGASPRLLAFTSTREFCSMFQLSDEVLSHKII 206
Query: 226 SRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM----TKKLGWGRL 281
S+L+PRD+A++GS C+R+ QLTK+E + KMVCQNAW E T ALE M K+ GW RL
Sbjct: 207 SKLSPRDIAAVGSSCKRLYQLTKSEILWKMVCQNAWASETTPALETMPAAGAKRFGWRRL 266
Query: 282 ARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDA 341
ARELTTLE+V W+K TV GAVEPSRCNFSACA GNR+VLFGGEG+NMQPM+DTFVL+L+A
Sbjct: 267 ARELTTLESVTWKKVTVGGAVEPSRCNFSACAVGNRVVLFGGEGINMQPMNDTFVLDLNA 326
Query: 342 ANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV 401
+ PEWR + V S PPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVF+LDLDAK PTW EV
Sbjct: 327 SEPEWRHMKVNSPPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFILDLDAKHPTWREV 386
Query: 402 SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPP 461
SG APPLPRSWHSSC+++G+KLVVSGGC D+GVLLSDT+LLDLT D P+W E+ SW+PP
Sbjct: 387 SGLAPPLPRSWHSSCMLDGTKLVVSGGCADSGVLLSDTFLLDLTMDVPVWTEVNVSWTPP 446
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
SRLGHSLSVYG K+LMFGGLAKSG LRLRS + YT+DL + E W+ + ++ G G+
Sbjct: 447 SRLGHSLSVYGARKLLMFGGLAKSGPLRLRSSDVYTLDLSEGEQCWRYVTGSSMPGAGNP 506
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
+ + PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL+LLDP+EEKP+WR+LNVPG+PP+
Sbjct: 507 AGISPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYLLDPTEEKPTWRVLNVPGRPPR 566
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
FAWGHSTCVVGGTR +VLGG TGEEW+L+E++EL LAS Q
Sbjct: 567 FAWGHSTCVVGGTRAIVLGGQTGEEWMLSEIYELSLASSQ 606
>gi|238481578|ref|NP_001154783.1| adagio protein 1 [Arabidopsis thaliana]
gi|332009509|gb|AED96892.1| adagio protein 1 [Arabidopsis thaliana]
Length = 626
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/583 (66%), Positives = 462/583 (79%), Gaps = 15/583 (2%)
Query: 37 DDTELSLKPG--LLFYP------TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVL 88
DD E L PG + YP T P FVV DA +PD PIIYVN VFE+ TGYRA+EVL
Sbjct: 19 DDEEGGLFPGGGPIPYPVGNLLHTAPCGFVVTDAVEPDQPIIYVNTVFEMVTGYRAEEVL 78
Query: 89 GRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLA 148
G NCRFLQ R P A+RRHPLVD +VVSEIR+C++EGIEFQGELLNF+KDG+PL+NRLRL
Sbjct: 79 GGNCRFLQCRGPFAKRRHPLVDSMVVSEIRKCIDEGIEFQGELLNFRKDGSPLMNRLRLT 138
Query: 149 PIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQD 208
PI DD T+THIIGIQ F E IDL V KE + D + G +S+
Sbjct: 139 PIYGDDDTITHIIGIQFFIETDIDLGPVLGSSTKE---KSIDGIYSALAAGERNVSR--G 193
Query: 209 ICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGA 268
+CG+ QLSDEV++ ILSRLTPRDVAS+ SVCRR+ LTKNE + + VCQNAWG E T
Sbjct: 194 MCGLFQLSDEVVSMKILSRLTPRDVASVSSVCRRLYVLTKNEDLWRRVCQNAWGSETTRV 253
Query: 269 LELM--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGV 326
LE + K+LGWGRLARELTTLEA WRK +V G+VEPSRCNFSACA GNR+VLFGGEGV
Sbjct: 254 LETVPGAKRLGWGRLARELTTLEAAAWRKLSVGGSVEPSRCNFSACAVGNRVVLFGGEGV 313
Query: 327 NMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDV 386
NMQPM+DTFVL+L++ PEW+ V V S PPGRWGHTL+ +NGS LVVFGGCG+QGLLNDV
Sbjct: 314 NMQPMNDTFVLDLNSDYPEWQHVKVSSPPPGRWGHTLTCVNGSNLVVFGGCGQQGLLNDV 373
Query: 387 FVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT 446
FVL+LDAK PTW E+SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+
Sbjct: 374 FVLNLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSI 433
Query: 447 DKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQ 506
+KP+WREIP +W+PPSRLGH+LSVYG K+LMFGGLAKSG L+ RS + +T+DL +EEP
Sbjct: 434 EKPVWREIPAAWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLKFRSSDVFTMDLSEEEPC 493
Query: 507 WKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEE 566
W+ + + G G+ V PPPRLDHVAV++P GRI+IFGGS+AGLHS SQL+LLDP+E+
Sbjct: 494 WRCVTGSGMPGAGNPGGVAPPPRLDHVAVNLPGGRILIFGGSVAGLHSASQLYLLDPTED 553
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVL 609
KP+WRILN+PG+PP+FAWGH TCVVGGTR +VLGG TGEEW+L
Sbjct: 554 KPTWRILNIPGRPPRFAWGHGTCVVGGTRAIVLGGQTGEEWML 596
>gi|237688434|gb|ACR15149.1| disease-related F-box protein [Hordeum vulgare]
Length = 609
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/597 (65%), Positives = 465/597 (77%), Gaps = 21/597 (3%)
Query: 36 GDDTELSLKPG--LLFYP------TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEV 87
DD E L PG + YP T P FVV DA +PD PIIYVN VFE+ TGYRA+EV
Sbjct: 18 ADDEEGGLFPGGGPIPYPVGNLLHTAPCGFVVTDAVEPDQPIIYVNTVFEMVTGYRAEEV 77
Query: 88 LGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRL 147
LG NCRFLQ R P A+RRHPLVD +VVSEIR+C++EGIEFQGELLNF+KDG PL+NRL L
Sbjct: 78 LGGNCRFLQCRGPFAKRRHPLVDSMVVSEIRKCIDEGIEFQGELLNFRKDGFPLMNRLHL 137
Query: 148 APIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH- 206
PI DD +TH +GIQ F+ A +DL V V +E +F + L Q
Sbjct: 138 TPIYGDDDIITHYMGIQFFTNANVDLGPVPGSVTREPVXXXRFAPDNFFRPITTGLXQDX 197
Query: 207 --QDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGRE 264
++ + QL+DEVL +ILSRL+PRDVAS+ SVCRR+ LTKNE + +MVC+NAWG E
Sbjct: 198 FCREYSSLFQLTDEVLCXSILSRLSPRDVASVSSVCRRLYDLTKNEDLWRMVCRNAWGSE 257
Query: 265 VTGALELM--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFG 322
T ALE + K+LGWGRLARELTTLEAV WRK TV GAVEPSRCNFSACA GNR+VLFG
Sbjct: 258 TTRALETVPAAKRLGWGRLARELTTLEAVAWRKLTVGGAVEPSRCNFSACAVGNRVVLFG 317
Query: 323 GEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGL 382
GEGVNMQPM+DTFVL+L+A+NPEWR V+V S+PPGRWGHTLS LNGSWLVVFGGCGRQGL
Sbjct: 318 GEGVNMQPMNDTFVLDLNASNPEWRHVNVSSAPPGRWGHTLSCLNGSWLVVFGGCGRQGL 377
Query: 383 LNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLL 442
LNDVF+L LDAK PTW E+ G APP+PRSWHSSC ++G+KLVV VLLSDT+LL
Sbjct: 378 LNDVFMLXLDAKHPTWREIPGVAPPVPRSWHSSCTLDGNKLVV--------VLLSDTFLL 429
Query: 443 DLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD 502
DL+ +KP+WREIP +W+PPSRLGH+LSVYG K+LMFGGLAKSG L+ RS + +T+DL +
Sbjct: 430 DLSIEKPVWREIPAAWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLKFRSSDVFTMDLSE 489
Query: 503 EEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD 562
EEP W+ + + G G+ V PPPRLDHVAV++P GRI+IFGGS+AGLHS SQL+LLD
Sbjct: 490 EEPCWRCVTGSGMPGAGNPGGVAPPPRLDHVAVNLPGGRILIFGGSVAGLHSASQLYLLD 549
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
P+E+KP+WRILN+PG+PP+FAWGH TCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 550 PTEDKPTWRILNIPGRPPRFAWGHGTCVVGGTRAIVLGGQTGEEWMLSELHELSLAS 606
>gi|215769165|dbj|BAH01394.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 623
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/569 (65%), Positives = 456/569 (80%), Gaps = 8/569 (1%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
VV+DA +PDFPIIYVN+ FE TGYRA+EVLGRNCRFLQ R P A+RRHPLVD VV++
Sbjct: 56 LVVSDALEPDFPIIYVNRGFEDATGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDTTVVTD 115
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHV 176
IRRCLEEG FQG+LLNF+KDG+P + +L+L PI DD T+TH +G+Q F+++ +DL +
Sbjct: 116 IRRCLEEGTVFQGDLLNFRKDGSPFMAKLQLTPIYGDDETITHYMGMQFFNDSNVDLGPL 175
Query: 177 SYPVFKENCNQQY---DQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDV 233
S KE D + + G S+H D+ LSDEVL ILSRL+PRD+
Sbjct: 176 SVSTTKEIVRSTLITPDNTIRPSPMGKGFCSEHSDL---FLLSDEVLCQKILSRLSPRDI 232
Query: 234 ASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELTTLEAV 291
AS+ SVC+R+ LT+N+ + +MVCQNAWG E T LE + T+ L WGRLARELTTLEAV
Sbjct: 233 ASVNSVCKRLYHLTRNDDLWRMVCQNAWGSEATQVLETVAGTRSLAWGRLARELTTLEAV 292
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
WRK TV GAVEPSRCNFSACAAGNR+VLFGGEGVNMQPM+DTFVL+L+A+ PEWR ++V
Sbjct: 293 TWRKLTVGGAVEPSRCNFSACAAGNRVVLFGGEGVNMQPMNDTFVLDLNASKPEWRHINV 352
Query: 352 KSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
+S+PPGRWGHTLS LNGS LV+FGGCGRQGLLNDVF+LDLDA+QPTW E+ G APP+PRS
Sbjct: 353 RSAPPGRWGHTLSCLNGSRLVLFGGCGRQGLLNDVFMLDLDAQQPTWREIPGLAPPVPRS 412
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
WHSSC ++G+KLVVSGGC D+GVLLSDTYLLD+T ++P+WREIP SW+PP RLGHSLSVY
Sbjct: 413 WHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMERPVWREIPASWTPPCRLGHSLSVY 472
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLD 531
K+LMFGGLAKSG LRLRS + +T+DL + +P W+ + + G + + V PPPRLD
Sbjct: 473 DGRKILMFGGLAKSGPLRLRSNDVFTLDLSENKPCWRCITGSGMPGASNPAGVGPPPRLD 532
Query: 532 HVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVV 591
HVAVS+P GRI+IFGGS+AGLHS S+L+LLDP+EEKP+WRILNVPG+PP+FAWGHSTCVV
Sbjct: 533 HVAVSLPGGRILIFGGSVAGLHSASKLYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVV 592
Query: 592 GGTRVLVLGGHTGEEWVLNELHELCLASK 620
GGT+ +VLGG TGEEW L ELHEL L S
Sbjct: 593 GGTKAIVLGGQTGEEWTLTELHELSLVSS 621
>gi|75116089|sp|Q67UX0.1|ADO2_ORYSJ RecName: Full=Putative adagio-like protein 2
gi|51535968|dbj|BAD38049.1| putative ZEITLUPE [Oryza sativa Japonica Group]
Length = 635
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/566 (66%), Positives = 455/566 (80%), Gaps = 8/566 (1%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
VV+DA +PDFPIIYVN+ FE TGYRA+EVLGRNCRFLQ R P A+RRHPLVD VV++
Sbjct: 56 LVVSDALEPDFPIIYVNRGFEDATGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDTTVVTD 115
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHV 176
IRRCLEEG FQG+LLNF+KDG+P + +L+L PI DD T+TH +G+Q F+++ +DL +
Sbjct: 116 IRRCLEEGTVFQGDLLNFRKDGSPFMAKLQLTPIYGDDETITHYMGMQFFNDSNVDLGPL 175
Query: 177 SYPVFKENCNQQY---DQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDV 233
S KE D + + G S+H D+ LSDEVL ILSRL+PRD+
Sbjct: 176 SVSTTKEIVRSTLITPDNTIRPSPMGKGFCSEHSDL---FLLSDEVLCQKILSRLSPRDI 232
Query: 234 ASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELTTLEAV 291
AS+ SVC+R+ LT+N+ + +MVCQNAWG E T LE + T+ L WGRLARELTTLEAV
Sbjct: 233 ASVNSVCKRLYHLTRNDDLWRMVCQNAWGSEATQVLETVAGTRSLAWGRLARELTTLEAV 292
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
WRK TV GAVEPSRCNFSACAAGNR+VLFGGEGVNMQPM+DTFVL+L+A+ PEWR ++V
Sbjct: 293 TWRKLTVGGAVEPSRCNFSACAAGNRVVLFGGEGVNMQPMNDTFVLDLNASKPEWRHINV 352
Query: 352 KSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
+S+PPGRWGHTLS LNGS LV+FGGCGRQGLLNDVF+LDLDA+QPTW E+ G APP+PRS
Sbjct: 353 RSAPPGRWGHTLSCLNGSRLVLFGGCGRQGLLNDVFMLDLDAQQPTWREIPGLAPPVPRS 412
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
WHSSC ++G+KLVVSGGC D+GVLLSDTYLLD+T ++P+WREIP SW+PP RLGHSLSVY
Sbjct: 413 WHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMERPVWREIPASWTPPCRLGHSLSVY 472
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLD 531
K+LMFGGLAKSG LRLRS + +T+DL + +P W+ + + G + + V PPPRLD
Sbjct: 473 DGRKILMFGGLAKSGPLRLRSNDVFTLDLSENKPCWRCITGSGMPGASNPAGVGPPPRLD 532
Query: 532 HVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVV 591
HVAVS+P GRI+IFGGS+AGLHS S+L+LLDP+EEKP+WRILNVPG+PP+FAWGHSTCVV
Sbjct: 533 HVAVSLPGGRILIFGGSVAGLHSASKLYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVV 592
Query: 592 GGTRVLVLGGHTGEEWVLNELHELCL 617
GGT+ +VLGG TGEEW L ELHEL L
Sbjct: 593 GGTKAIVLGGQTGEEWTLTELHELSL 618
>gi|125538098|gb|EAY84493.1| hypothetical protein OsI_05869 [Oryza sativa Indica Group]
Length = 634
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/566 (66%), Positives = 455/566 (80%), Gaps = 8/566 (1%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
VV+DA +PDFPIIYVN+ FE TGYRA+EVLGRNCRFLQ R P A+RRHPLVD VV++
Sbjct: 55 LVVSDALEPDFPIIYVNRGFEDATGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDTTVVTD 114
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHV 176
IRRCLEEG FQG+LLNF+KDG+P + +L+L PI DD T+TH +G+Q F+++ +DL +
Sbjct: 115 IRRCLEEGTVFQGDLLNFRKDGSPFMAKLQLTPIYGDDETITHYMGMQFFNDSNVDLGPL 174
Query: 177 SYPVFKENCNQQY---DQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDV 233
S KE D + + G S+H D+ LSDEVL ILSRL+PRD+
Sbjct: 175 SVSTTKEIVRSTLITPDNTIRPSPMGKGFCSEHSDL---FLLSDEVLCQKILSRLSPRDI 231
Query: 234 ASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELTTLEAV 291
AS+ SVC+R+ LT+N+ + +MVCQNAWG E T LE + T+ L WGRLARELTTLEAV
Sbjct: 232 ASVNSVCKRLYHLTRNDDLWRMVCQNAWGSEATQVLETVAGTRSLAWGRLARELTTLEAV 291
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
WRK TV GAVEPSRCNFSACAAGNR+VLFGGEGVNMQPM+DTFVL+L+A+ PEWR ++V
Sbjct: 292 TWRKLTVGGAVEPSRCNFSACAAGNRVVLFGGEGVNMQPMNDTFVLDLNASKPEWRHINV 351
Query: 352 KSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
+S+PPGRWGHTLS LNGS LV+FGGCGRQGLLNDVF+LDLDA+QPTW E+ G APP+PRS
Sbjct: 352 RSAPPGRWGHTLSCLNGSRLVLFGGCGRQGLLNDVFMLDLDAQQPTWREIPGLAPPVPRS 411
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
WHSSC ++G+KLVVSGGC D+GVLLSDTYLLD+T ++P+WREIP SW+PP RLGHSLSVY
Sbjct: 412 WHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMERPVWREIPASWTPPCRLGHSLSVY 471
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLD 531
K+LMFGGLAKSG LRLRS + +T+DL + +P W+ + + G + + V PPPRLD
Sbjct: 472 DGRKILMFGGLAKSGPLRLRSNDVFTLDLSENKPCWRCITGSGMPGASNPAGVGPPPRLD 531
Query: 532 HVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVV 591
HVAVS+P GRI+IFGGS+AGLHS S+L+LLDP+EEKP+WRILNVPG+PP+FAWGHSTCVV
Sbjct: 532 HVAVSLPGGRILIFGGSVAGLHSASKLYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVV 591
Query: 592 GGTRVLVLGGHTGEEWVLNELHELCL 617
GGT+ +VLGG TGEEW L ELHEL L
Sbjct: 592 GGTKAIVLGGQTGEEWTLTELHELSL 617
>gi|357123540|ref|XP_003563468.1| PREDICTED: adagio-like protein 1-like [Brachypodium distachyon]
Length = 640
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/578 (65%), Positives = 455/578 (78%), Gaps = 15/578 (2%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P VV DA +PD PIIYVN+ FE TGYRA+EVLGRNCRFLQ R P AQRRHPLVD V
Sbjct: 67 PYGLVVTDALEPDCPIIYVNRGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAAV 126
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
VS I+RC++ G +F+G+LLNF+KDG PL+NRL L PI DD +TH +GIQ F+ A +DL
Sbjct: 127 VSGIQRCIDNGTQFRGDLLNFRKDGFPLMNRLHLTPIYGDDDIITHYMGIQFFTNANVDL 186
Query: 174 NHVSYPVFKENCNQQY---DQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNI-----L 225
+ + +E D S + S G + ++ + L+DEV L
Sbjct: 187 GPLPGSITREPVRSTRFAPDNSFRPISTGPGESNFCREYSSLFLLTDEV-----LCQSIL 241
Query: 226 SRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLAR 283
SRL+PRD+AS+ SVCRR+ LTKNE + +MVC+NAWG E T ALE + K+LGWGRLAR
Sbjct: 242 SRLSPRDIASVSSVCRRLYDLTKNEDLWRMVCRNAWGSETTRALETVPAAKRLGWGRLAR 301
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
ELTTLEAV WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L+A+N
Sbjct: 302 ELTTLEAVAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASN 361
Query: 344 PEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
PEWR ++V ++PPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVF+LDLDAK PTW E+ G
Sbjct: 362 PEWRHINVSAAPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFILDLDAKHPTWREIPG 421
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSR 463
APP+PRSWHSSC ++G+KLVVSGGC D+GVLLSDTYLLD++ D+P+WRE+P SW+PPSR
Sbjct: 422 VAPPVPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVSMDRPVWREVPASWAPPSR 481
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSA 523
LGHS+SVY K+LMFGGLAKSG LRLRS + +T+DL ++EP W+ L + G G+ +
Sbjct: 482 LGHSMSVYDGRKILMFGGLAKSGPLRLRSSDVFTMDLSEDEPCWRCLTGSGMPGAGNPAG 541
Query: 524 VVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFA 583
PPPRLDHVAVS+P GR++IFGGS+AGLHS SQL+LLDP+EEKP+WRILNVPG+PP+FA
Sbjct: 542 AGPPPRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPGRPPRFA 601
Query: 584 WGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
WGHSTCVVGGT+ +VLGG TGEEW+L E+HEL LAS
Sbjct: 602 WGHSTCVVGGTKAIVLGGQTGEEWMLTEVHELSLASNS 639
>gi|242060534|ref|XP_002451556.1| hypothetical protein SORBIDRAFT_04g003660 [Sorghum bicolor]
gi|241931387|gb|EES04532.1| hypothetical protein SORBIDRAFT_04g003660 [Sorghum bicolor]
Length = 612
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/569 (65%), Positives = 452/569 (79%), Gaps = 8/569 (1%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
VV+DA +PDFPIIYVN+ FE TGYRA+EVLGRNCRFLQ R P AQRRHPLVD VV+
Sbjct: 45 MVVSDALEPDFPIIYVNRGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAAVVTG 104
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHV 176
IRRCLEEG EFQG+LLNF+KDG+P + RL+L PI DD +TH +GIQ F+++ +DL
Sbjct: 105 IRRCLEEGTEFQGDLLNFRKDGSPYMARLQLTPIYGDDEMITHYMGIQFFNDSNVDLGPS 164
Query: 177 SYPVFKENCNQQY---DQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDV 233
V KE + + S G L +H + LSDEV+ ILS+L+PRD+
Sbjct: 165 PGSVTKELARSTWIAPGNTDSPTSVGKGNLWEHSSL---FLLSDEVICQKILSKLSPRDI 221
Query: 234 ASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELTTLEAV 291
AS+ SVC+R +T+NE + +MVCQNAWG E T ALE + ++ L WGRLARELTTLEAV
Sbjct: 222 ASVNSVCKRFYHMTRNEDLWRMVCQNAWGTEATRALETVAGSRSLAWGRLARELTTLEAV 281
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L A+ PEWR ++V
Sbjct: 282 AWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLSASKPEWRHINV 341
Query: 352 KSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
S+PPGRWGHTLS LNGS L++FGGCG QGLLNDVF+LDLDA+ PTW E+ G APP+PRS
Sbjct: 342 SSAPPGRWGHTLSCLNGSRLILFGGCGGQGLLNDVFILDLDAQHPTWREIPGLAPPVPRS 401
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
WHSSC ++G+KLVVSGGC D+GVLLSDTYLLD+T +KP+WREIP SWSPPSRLGHSLSVY
Sbjct: 402 WHSSCTVDGTKLVVSGGCADSGVLLSDTYLLDVTMEKPVWREIPASWSPPSRLGHSLSVY 461
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLD 531
K+LMFGGLAKSG LRLRS + +T+DL +++P W+ + + G G+ + V PPPRLD
Sbjct: 462 DGKKILMFGGLAKSGPLRLRSSDVFTLDLSEDKPCWRCITGSRMPGAGNPAGVGPPPRLD 521
Query: 532 HVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVV 591
HVAVS+P GR++IFGGS+AGLHS S+L+LLDP+EEKP+WR+LNVPG PP+FAWGHSTCVV
Sbjct: 522 HVAVSLPGGRVLIFGGSVAGLHSASKLYLLDPTEEKPTWRLLNVPGHPPRFAWGHSTCVV 581
Query: 592 GGTRVLVLGGHTGEEWVLNELHELCLASK 620
GGT+ +VLGG TGEEW+L E++EL LAS
Sbjct: 582 GGTKAIVLGGQTGEEWMLTEIYELSLASS 610
>gi|327342206|gb|AEA50890.1| ztla [Populus tremula]
Length = 535
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/535 (70%), Positives = 444/535 (82%), Gaps = 9/535 (1%)
Query: 93 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRD 152
RFLQ R P A+RRHPLVD VVSEIRRCLEEGIEFQGELLNF+KDG+PL+NRLRL PI
Sbjct: 1 RFLQCRGPFAKRRHPLVDSTVVSEIRRCLEEGIEFQGELLNFRKDGSPLMNRLRLTPIYG 60
Query: 153 DDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPL-----SQHQ 207
+D T+TH+IGIQ F+EA IDL V KE+ ++ D+ FS + P+ + +
Sbjct: 61 EDDTITHVIGIQFFTEANIDLGPVPGYSVKES-SKLADKFRSGFST-YRPIPVGDRNVSR 118
Query: 208 DICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTG 267
ICGILQLSDEVL+ ILSRLTPRD+ASIGSVCR++ +LTKNE + +MVCQNAWG E T
Sbjct: 119 GICGILQLSDEVLSLKILSRLTPRDIASIGSVCRQLYELTKNEDLWRMVCQNAWGSETTR 178
Query: 268 ALELM--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEG 325
ALE + K+LGWGRLARELTTLEA WRK TV G+VEPSRCNFSACA GNR+VLFGGEG
Sbjct: 179 ALETVPGAKRLGWGRLARELTTLEAATWRKLTVGGSVEPSRCNFSACAVGNRVVLFGGEG 238
Query: 326 VNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLND 385
VNMQPM+DTFVL+L+++NPEW+ V V S PPGRWGHTLS +NGS LVVFGGCGRQGLLND
Sbjct: 239 VNMQPMNDTFVLDLNSSNPEWQHVHVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLND 298
Query: 386 VFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLT 445
VF+LDLDAK PTW E+SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+
Sbjct: 299 VFILDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLS 358
Query: 446 TDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEP 505
+KP+WREIP SW+PPSRLGH+LSVYG K+LMFGGLAKSG LR RS + +T+DL +EEP
Sbjct: 359 MEKPIWREIPVSWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEP 418
Query: 506 QWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSE 565
W+ + + G G+ S + PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL+LLDP++
Sbjct: 419 CWRCVTGSGMPGAGNPSGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYLLDPTD 478
Query: 566 EKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
EKP+WRILNVPG+PP+FAWGHSTCVVGGTR +VLGG TGEEW+L+ELHEL L S
Sbjct: 479 EKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLGSS 533
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ S PSR S G +V++FGG G +++ +DL
Sbjct: 200 TLEAATWRKLTVGGSVEPSRCNFSACAVG-NRVVLFGG---EGVNMQPMNDTFVLDLNSS 255
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ + ++ PP R H + +++FGG GL + +F+LD
Sbjct: 256 NPEWQHVHVSS----------PPPGRWGHTLSCVNGSHLVVFGGCGRQGLLN--DVFILD 303
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 304 LDAKPPTWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 361
>gi|357148991|ref|XP_003574962.1| PREDICTED: putative adagio-like protein 2-like [Brachypodium
distachyon]
Length = 617
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/570 (64%), Positives = 451/570 (79%), Gaps = 9/570 (1%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
VV+DA +PDFPIIYVN+ FE TGY A+EVLGRNCRFLQ R P AQRRHPLVD +VV+E
Sbjct: 49 LVVSDALEPDFPIIYVNRGFEDATGYHAEEVLGRNCRFLQCRGPFAQRRHPLVDAIVVAE 108
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHV 176
I+RCLEEG EFQG+LLNF+KDG+P + L+L PI DD T+TH +GIQ F+++ +DL +
Sbjct: 109 IQRCLEEGTEFQGDLLNFRKDGSPFMTNLQLKPIYGDDETITHYMGIQFFNDSNVDLGPL 168
Query: 177 SYPVFKENCNQQY----DQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRD 232
+ K+ + + +G + S+H ++ QLSDEVL ILSRL+PRD
Sbjct: 169 PGSMTKDAVRSIWIAPDNTHRPSPTGKGNFCSEHSNL---FQLSDEVLCQKILSRLSPRD 225
Query: 233 VASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELTTLEA 290
+AS+ SVC+R+ +TKN+H+ +MVCQNAWG E T ALE + +K L WGR+ARE+TTLEA
Sbjct: 226 IASVNSVCKRLYHMTKNDHLWRMVCQNAWGSEATRALENVAGSKSLAWGRIAREMTTLEA 285
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVS 350
V WRK T+ G VEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTFVL+L A+ PEWR ++
Sbjct: 286 VAWRKLTIGGTVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLSASKPEWRHIN 345
Query: 351 VKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
V +PPGRWGHTLS L+GS LV+FGGCG QGLLNDVF+LDLDAK PTW E+ G APP+PR
Sbjct: 346 VGLAPPGRWGHTLSCLSGSLLVLFGGCGGQGLLNDVFILDLDAKHPTWREILGLAPPVPR 405
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSV 470
SWHSSC ++GSKLVVSGGC D+GVLLSDTYLLD+T ++P+WR IP W+PPSRLGHSLSV
Sbjct: 406 SWHSSCTLDGSKLVVSGGCADSGVLLSDTYLLDVTMERPVWRLIPAPWTPPSRLGHSLSV 465
Query: 471 YGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRL 530
Y K+LMFGGLAKSG LRLRSG+ +T+DL + P W+ + + G + + V PPPRL
Sbjct: 466 YDGRKILMFGGLAKSGPLRLRSGDVFTMDLSEAVPSWRCITGSGMPGACNPAGVGPPPRL 525
Query: 531 DHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCV 590
DHVAVS+P GRI+IFGGS+AGLHS SQL++LDP+EEKP+WRILNVPG+PP+FAWGHSTCV
Sbjct: 526 DHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTEEKPTWRILNVPGRPPRFAWGHSTCV 585
Query: 591 VGGTRVLVLGGHTGEEWVLNELHELCLASK 620
+ GT+ +VLGG TGEEW L E+HEL L S
Sbjct: 586 MEGTKAIVLGGQTGEEWTLTEIHELSLTSS 615
>gi|413935631|gb|AFW70182.1| hypothetical protein ZEAMMB73_900497 [Zea mays]
Length = 609
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/595 (62%), Positives = 459/595 (77%), Gaps = 13/595 (2%)
Query: 31 GGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGR 90
GGG G L+++ G+L VV+DA +PDFPIIYVN+ FE TGY A+EVLGR
Sbjct: 21 GGGDAGPGFSLAIE-GVL----GACGMVVSDALEPDFPIIYVNRGFESSTGYSAEEVLGR 75
Query: 91 NCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPI 150
NCRFLQ R P AQRRHPLVD VV+ IRRCL+EG EF G+LLNF+KD +P + RL+L PI
Sbjct: 76 NCRFLQCRGPFAQRRHPLVDAAVVTRIRRCLDEGTEFHGDLLNFRKDCSPYMARLQLTPI 135
Query: 151 RDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSG---GHSPLSQHQ 207
DD +TH +GIQ F+++ +DL S V KE + S G L +H
Sbjct: 136 YGDDEVITHYMGIQFFNDSNVDLGPSSGSVTKELARSTWIAPGNTDSPTPVGKGNLWEHS 195
Query: 208 DICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTG 267
+ LSDEV+ ILS+L+PRD+AS+ SVC+R+ +T+NE + +MVCQNAWG E T
Sbjct: 196 SL---FLLSDEVICQKILSKLSPRDIASVNSVCKRLHHMTRNEDLWRMVCQNAWGTEATR 252
Query: 268 ALELM--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEG 325
ALE + ++ L WGRLARELTTLEAV WRK TV GAVEPSRCNFSACA GNR+VLFGGEG
Sbjct: 253 ALETVAGSRSLAWGRLARELTTLEAVAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEG 312
Query: 326 VNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLND 385
VNMQPM+DTFVL+L A+ PEWR ++V ++PPGRWGHTLS LNGS L++FGGCG QGLLND
Sbjct: 313 VNMQPMNDTFVLDLSASKPEWRHINVSAAPPGRWGHTLSCLNGSRLILFGGCGGQGLLND 372
Query: 386 VFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLT 445
VF+LDLDA+ PTW E+ G APP+PRSWHSSC ++G+KLVVSGGC D+GVLLSDTYLLD+T
Sbjct: 373 VFILDLDAQHPTWREIPGLAPPVPRSWHSSCTVDGTKLVVSGGCADSGVLLSDTYLLDVT 432
Query: 446 TDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEP 505
++P+WREIP SWSPPSRLGHSLSVY K+LMFGGLAKSG LRLRS + +T+DL +++P
Sbjct: 433 MERPVWREIPASWSPPSRLGHSLSVYDGRKILMFGGLAKSGPLRLRSSDVFTLDLSEDKP 492
Query: 506 QWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSE 565
W+ + + G G+ + V PPPRLDHV VS+P GR++IFGGS+AGLHS S+L+LLDP+E
Sbjct: 493 CWRCITGSRMPGAGNPAGVGPPPRLDHVVVSLPGGRVLIFGGSVAGLHSASKLYLLDPTE 552
Query: 566 EKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
+KP+WR+LNVPG PP+FAWGHSTCVVGGT+ +VLGG TGEEW L E+HEL LAS
Sbjct: 553 DKPTWRLLNVPGHPPRFAWGHSTCVVGGTKAIVLGGQTGEEWTLTEIHELSLASS 607
>gi|148840392|gb|ABR14627.1| ZTL [Triticum aestivum]
Length = 618
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/569 (64%), Positives = 447/569 (78%), Gaps = 7/569 (1%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
VV+DA +PDFPIIYVN+ FE TGY A+EVLGRNCRFLQ R P AQRRHPLVD +VV+E
Sbjct: 50 LVVSDALEPDFPIIYVNRGFEDATGYHAEEVLGRNCRFLQCRGPFAQRRHPLVDAIVVTE 109
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHV 176
I+RCLEEG FQG+LLNF+KDG+P + L+L PI DD T+TH +GIQ F++ +DL +
Sbjct: 110 IQRCLEEGTGFQGDLLNFRKDGSPFMTSLQLKPIYGDDETITHYMGIQFFNDCNVDLGPL 169
Query: 177 SYPVFKENCNQQY---DQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDV 233
+ KE + D + + G + + QLSDEVL ILSRL+PRD+
Sbjct: 170 PGSMAKEVVRSIWITPDNTLRPSPTGKGNFCS--EYSHLFQLSDEVLCQKILSRLSPRDI 227
Query: 234 ASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELTTLEAV 291
AS+ SVC+R+ +TKN+H+ +MVCQNAWG + T ALE + TK L WGRLARELTTLEAV
Sbjct: 228 ASVNSVCKRLYHMTKNDHLWRMVCQNAWGNDATRALENVAGTKSLAWGRLARELTTLEAV 287
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
W+K T+ G+VEPSRCNFSACA GNR+VLFGGEGVN QPM+DTFVL+L A+ PEWR V+V
Sbjct: 288 TWKKLTIGGSVEPSRCNFSACAVGNRVVLFGGEGVNAQPMNDTFVLDLSASKPEWRHVNV 347
Query: 352 KSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
+PPGRWGHTLS LNGS LV+FGGCG QGLLNDVF+LDLDAK PTW E+ G PP+PRS
Sbjct: 348 GLAPPGRWGHTLSCLNGSLLVLFGGCGGQGLLNDVFILDLDAKHPTWREIFGLTPPVPRS 407
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
WHSSC ++GSKLVVSGGC D+GVLLSDT+LLD+T ++P+WREIP W+PPSRLGHSLSVY
Sbjct: 408 WHSSCTLDGSKLVVSGGCADSGVLLSDTHLLDVTMERPVWREIPAPWTPPSRLGHSLSVY 467
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLD 531
K+LMFGGLAKSG LRLRSG+ +T+DL D P W+ + + G + + V PPPRLD
Sbjct: 468 DGRKILMFGGLAKSGPLRLRSGDVFTMDLSDAVPSWRCITGSGMPGACNPAGVGPPPRLD 527
Query: 532 HVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVV 591
HVAVS+P GRI+IFGGS+AGLHS SQL+LLDP+EEKP+WRILNVPG+PP+FAWGHSTCV+
Sbjct: 528 HVAVSLPGGRIMIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVM 587
Query: 592 GGTRVLVLGGHTGEEWVLNELHELCLASK 620
G++ +VLGG TGEEW L E+HEL LAS
Sbjct: 588 EGSKAIVLGGQTGEEWTLTEIHELSLASS 616
>gi|326500618|dbj|BAJ94975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/569 (64%), Positives = 446/569 (78%), Gaps = 7/569 (1%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
VV+DA +PDFPIIYVN+ FE TGY A+EVLGRNCRFLQ R P AQRRHPLVD +VV+E
Sbjct: 48 LVVSDALEPDFPIIYVNRGFEDATGYHAEEVLGRNCRFLQCRGPFAQRRHPLVDAIVVTE 107
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHV 176
I+RCLEEG EFQG+LLNF+KDG+P + L+L PI DD T+TH +GIQ F++ ++L +
Sbjct: 108 IQRCLEEGTEFQGDLLNFRKDGSPFMTSLQLKPIYGDDETITHYMGIQFFNDCNVELGPL 167
Query: 177 SYPVFKENCNQQY---DQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDV 233
+ KE + D + + G + + QLSDEVL ILSRL+PRD+
Sbjct: 168 PGSMAKEAVRSLWIAPDNTLRPTPTGKGNFCS--EYSHLFQLSDEVLCQKILSRLSPRDI 225
Query: 234 ASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELTTLEAV 291
AS+ SVC+R+ +TKN+H+ +MVCQNAWG + T ALE + TK L WGRLARELTTLEAV
Sbjct: 226 ASVNSVCKRLYHMTKNDHLWRMVCQNAWGNDATRALENVAGTKSLAWGRLARELTTLEAV 285
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
W+K T+ G VEPSRCNFSACA GNR+VLFGGEGVN QPM+DTFVL+L A PEWR V+V
Sbjct: 286 TWKKLTIGGTVEPSRCNFSACAVGNRVVLFGGEGVNAQPMNDTFVLDLSATKPEWRHVNV 345
Query: 352 KSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
+PPGRWGHTLS L+GS LV+FGGCG QGLLNDVF+LDLDAK PTW E+ G PP+PRS
Sbjct: 346 GLAPPGRWGHTLSCLSGSLLVLFGGCGGQGLLNDVFILDLDAKHPTWREIFGLTPPVPRS 405
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
WHSSC ++GSKLVVSGGC D+GVLLSDT+LLD+T ++P+WREIP W+PPSRLGHSLSVY
Sbjct: 406 WHSSCTMDGSKLVVSGGCADSGVLLSDTHLLDVTMERPVWREIPAPWTPPSRLGHSLSVY 465
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLD 531
K+LMFGGLAKSG LRLRSG+ +T+DL D P W+ + + G + + V PPPRLD
Sbjct: 466 DGRKILMFGGLAKSGPLRLRSGDVFTMDLSDAVPSWRCITGSGMPGACNPAGVGPPPRLD 525
Query: 532 HVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVV 591
HVAVS+P GRI+IFGGS+AGLHS SQL+LLDP+EEKP+WRILNVPG+PP+FAWGHSTCV+
Sbjct: 526 HVAVSLPGGRIMIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVM 585
Query: 592 GGTRVLVLGGHTGEEWVLNELHELCLASK 620
G++ +VLGG TGEEW L E+HEL LAS
Sbjct: 586 EGSKAIVLGGQTGEEWTLTEIHELSLASS 614
>gi|339778637|gb|AEK06200.1| zeitlupe 2 [Populus balsamifera]
gi|339778639|gb|AEK06201.1| zeitlupe 2 [Populus balsamifera]
gi|339778641|gb|AEK06202.1| zeitlupe 2 [Populus balsamifera]
gi|339778643|gb|AEK06203.1| zeitlupe 2 [Populus balsamifera]
gi|339778645|gb|AEK06204.1| zeitlupe 2 [Populus balsamifera]
gi|339778647|gb|AEK06205.1| zeitlupe 2 [Populus balsamifera]
gi|339778649|gb|AEK06206.1| zeitlupe 2 [Populus balsamifera]
gi|339778651|gb|AEK06207.1| zeitlupe 2 [Populus balsamifera]
gi|339778653|gb|AEK06208.1| zeitlupe 2 [Populus balsamifera]
gi|339778655|gb|AEK06209.1| zeitlupe 2 [Populus balsamifera]
gi|339778657|gb|AEK06210.1| zeitlupe 2 [Populus balsamifera]
gi|339778659|gb|AEK06211.1| zeitlupe 2 [Populus balsamifera]
gi|339778661|gb|AEK06212.1| zeitlupe 2 [Populus balsamifera]
gi|339778663|gb|AEK06213.1| zeitlupe 2 [Populus balsamifera]
gi|339778665|gb|AEK06214.1| zeitlupe 2 [Populus balsamifera]
gi|339778667|gb|AEK06215.1| zeitlupe 2 [Populus balsamifera]
gi|339778669|gb|AEK06216.1| zeitlupe 2 [Populus balsamifera]
gi|339778671|gb|AEK06217.1| zeitlupe 2 [Populus balsamifera]
Length = 591
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/558 (66%), Positives = 437/558 (78%), Gaps = 15/558 (2%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P FVV DA +PD P+IYVN VFE+ TGYRA+EVLGRN PLVD
Sbjct: 39 TAPCGFVVTDALEPDHPLIYVNTVFEMATGYRAEEVLGRNXXXXXXXXXXXXXXXPLVDS 98
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
VVSEIRRCL+EGIEFQGELLNF+KDG+PL+NRL+L PI DD T+TH+IGIQ F+E I
Sbjct: 99 TVVSEIRRCLDEGIEFQGELLNFRKDGSPLMNRLQLTPIYGDDDTITHVIGIQFFTETNI 158
Query: 172 DLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH--------QDICGILQLSDEVLAHN 223
DL V KE+ + A F G S + ICGILQLSDEVL
Sbjct: 159 DLGPVPGSFVKESA-----KLADRFRSGLSTYRPFPAGDRNVCRGICGILQLSDEVLYLK 213
Query: 224 ILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRL 281
+LSRLTPRD+ASIGSVCR++ LTKNE + +MVCQNAWG E LE + K+LGWGRL
Sbjct: 214 VLSRLTPRDIASIGSVCRQLYALTKNEDLWRMVCQNAWGSETASVLETVPGAKRLGWGRL 273
Query: 282 ARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDA 341
ARELTTLEA WRK TV GAVEPSRCNFSACA GNR+VLFGGEGV+MQPM+DTFVL+L++
Sbjct: 274 ARELTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVDMQPMNDTFVLDLNS 333
Query: 342 ANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV 401
++PEW+ V V S PPGRWGHTLS +NGS LVVFGGCGRQGLLNDVFVLDLDAK PTW E+
Sbjct: 334 SSPEWQHVQVSSPPPGRWGHTLSCVNGSNLVVFGGCGRQGLLNDVFVLDLDAKPPTWREI 393
Query: 402 SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPP 461
SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP +W+PP
Sbjct: 394 SGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPIWREIPVAWTPP 453
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
SRLGH+LSVYG K+LMFGGLAKSG LR RS + +++DL +EEP W+ + + G G+
Sbjct: 454 SRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFSMDLSEEEPCWRCVTGSGMPGAGNP 513
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
+ PPPRLDHVA+S+P GRI+IFGGS+AGLHS SQL+LLDP++EKP+WRILNVPG+PP+
Sbjct: 514 GGIAPPPRLDHVAMSLPGGRILIFGGSVAGLHSASQLYLLDPTDEKPTWRILNVPGRPPR 573
Query: 582 FAWGHSTCVVGGTRVLVL 599
FAWGHSTCVVGGTR +VL
Sbjct: 574 FAWGHSTCVVGGTRAIVL 591
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS 462
GGA R S+C + G+++V+ GG ++DT++LDL + P W+ + S PP
Sbjct: 291 GGAVEPSRCNFSACAV-GNRVVLFGGEGVDMQPMNDTFVLDLNSSSPEWQHVQVSSPPPG 349
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQS 522
R GH+LS + +++FGG + G L + + +DL + P W+++ S
Sbjct: 350 RWGHTLSCVNGSNLVVFGGCGRQGLLN----DVFVLDLDAKPPTWREI-----------S 394
Query: 523 AVVPP-PRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
+ PP PR H + ++ ++I+ GG S FLLD S EKP WR + V PP
Sbjct: 395 GLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPIWREIPVAWTPPS 454
Query: 582 FAWGHSTCVVGGTRVLVLGG 601
GH+ V GG ++L+ GG
Sbjct: 455 -RLGHTLSVYGGRKILMFGG 473
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G +V++FGG G +++ +DL
Sbjct: 279 TLEAAAWRKLTVGGAVEPSRCNFSACAVG-NRVVLFGG---EGVDMQPMNDTFVLDLNSS 334
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ + Q + PP R H + +++FGG GL + +F+LD
Sbjct: 335 SPEWQHV----------QVSSPPPGRWGHTLSCVNGSNLVVFGGCGRQGLLN--DVFVLD 382
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 383 LDAKPPTWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 440
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 28/181 (15%)
Query: 441 LLDLTTDKPMWREI-PTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTID 499
L LT ++ +WR + +W S L K L +G LA+ E T+
Sbjct: 233 LYALTKNEDLWRMVCQNAWG--SETASVLETVPGAKRLGWGRLAR---------ELTTL- 280
Query: 500 LGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLF 559
E W++L + V P R + A ++ R+++FGG + + F
Sbjct: 281 ---EAAAWRKL---------TVGGAVEPSRCNFSACAV-GNRVVLFGGEGVDMQPMNDTF 327
Query: 560 LLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
+LD + P W+ + V PP WGH+ V G+ ++V GG G + +LN++ L L +
Sbjct: 328 VLDLNSSSPEWQHVQV-SSPPPGRWGHTLSCVNGSNLVVFGG-CGRQGLLNDVFVLDLDA 385
Query: 620 K 620
K
Sbjct: 386 K 386
>gi|339778635|gb|AEK06199.1| zeitlupe 2 [Populus balsamifera]
Length = 591
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/558 (66%), Positives = 437/558 (78%), Gaps = 15/558 (2%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P FVV DA +PD P+IYVN VFE+ TGYRA+EVLGRN PLVD
Sbjct: 39 TAPCGFVVTDALEPDHPLIYVNTVFEMATGYRAEEVLGRNXXXXXXXXXXXXXXXPLVDS 98
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
VVSEIRRCL+EGIEFQGELLNF+KDG+PL+NRL+L PI DD T+TH+IGIQ F+E I
Sbjct: 99 TVVSEIRRCLDEGIEFQGELLNFRKDGSPLMNRLQLTPIYGDDDTITHVIGIQFFTETNI 158
Query: 172 DLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH--------QDICGILQLSDEVLAHN 223
DL V KE+ + A F G S + ICGILQLSDEVL
Sbjct: 159 DLGPVPGSFVKESA-----KLADRFRSGLSTYRPFPAGDRNVCRGICGILQLSDEVLYLK 213
Query: 224 ILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRL 281
+LSRLTPRD+ASIGSVCR++ LTKNE + +MVCQNAWG E LE + K+LGWGRL
Sbjct: 214 VLSRLTPRDIASIGSVCRQLYALTKNEDLWRMVCQNAWGSETASVLETVPGAKRLGWGRL 273
Query: 282 ARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDA 341
ARELTTLEA WRK TV GAVEPSRCNFSACA GNR+VLFGGEGV+MQPM+DTFVL+L++
Sbjct: 274 ARELTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVDMQPMNDTFVLDLNS 333
Query: 342 ANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV 401
++PEW+ V V S PPGRWGHTLS +NGS LVVFGGCGRQGLLNDVFVLDLDAK PTW E+
Sbjct: 334 SSPEWQHVQVSSPPPGRWGHTLSCVNGSXLVVFGGCGRQGLLNDVFVLDLDAKPPTWREI 393
Query: 402 SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPP 461
SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP +W+PP
Sbjct: 394 SGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPIWREIPVAWTPP 453
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
SRLGH+LSVYG K+LMFGGLAKSG LR RS + +++DL +EEP W+ + + G G+
Sbjct: 454 SRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFSMDLSEEEPCWRCVTGSGMPGAGNP 513
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
+ PPPRLDHVA+S+P GRI+IFGGS+AGLHS SQL+LLDP++EKP+WRILNVPG+PP+
Sbjct: 514 GGIAPPPRLDHVAMSLPGGRILIFGGSVAGLHSASQLYLLDPTDEKPTWRILNVPGRPPR 573
Query: 582 FAWGHSTCVVGGTRVLVL 599
FAWGHSTCVVGGTR +VL
Sbjct: 574 FAWGHSTCVVGGTRAIVL 591
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS 462
GGA R S+C + G+++V+ GG ++DT++LDL + P W+ + S PP
Sbjct: 291 GGAVEPSRCNFSACAV-GNRVVLFGGEGVDMQPMNDTFVLDLNSSSPEWQHVQVSSPPPG 349
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQS 522
R GH+LS + +++FGG + G L + + +DL + P W+++ S
Sbjct: 350 RWGHTLSCVNGSXLVVFGGCGRQGLLN----DVFVLDLDAKPPTWREI-----------S 394
Query: 523 AVVPP-PRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
+ PP PR H + ++ ++I+ GG S FLLD S EKP WR + V PP
Sbjct: 395 GLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPIWREIPVAWTPPS 454
Query: 582 FAWGHSTCVVGGTRVLVLGG 601
GH+ V GG ++L+ GG
Sbjct: 455 -RLGHTLSVYGGRKILMFGG 473
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G +V++FGG G +++ +DL
Sbjct: 279 TLEAAAWRKLTVGGAVEPSRCNFSACAVG-NRVVLFGG---EGVDMQPMNDTFVLDLNSS 334
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ + Q + PP R H + +++FGG GL + +F+LD
Sbjct: 335 SPEWQHV----------QVSSPPPGRWGHTLSCVNGSXLVVFGGCGRQGLLN--DVFVLD 382
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 383 LDAKPPTWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 440
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 28/181 (15%)
Query: 441 LLDLTTDKPMWREI-PTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTID 499
L LT ++ +WR + +W S L K L +G LA+ E T+
Sbjct: 233 LYALTKNEDLWRMVCQNAWG--SETASVLETVPGAKRLGWGRLAR---------ELTTL- 280
Query: 500 LGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLF 559
E W++L + V P R + A ++ R+++FGG + + F
Sbjct: 281 ---EAAAWRKL---------TVGGAVEPSRCNFSACAV-GNRVVLFGGEGVDMQPMNDTF 327
Query: 560 LLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
+LD + P W+ + V PP WGH+ V G+ ++V GG G + +LN++ L L +
Sbjct: 328 VLDLNSSSPEWQHVQV-SSPPPGRWGHTLSCVNGSXLVVFGG-CGRQGLLNDVFVLDLDA 385
Query: 620 K 620
K
Sbjct: 386 K 386
>gi|297832606|ref|XP_002884185.1| hypothetical protein ARALYDRAFT_343571 [Arabidopsis lyrata subsp.
lyrata]
gi|297330025|gb|EFH60444.1| hypothetical protein ARALYDRAFT_343571 [Arabidopsis lyrata subsp.
lyrata]
Length = 607
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/594 (62%), Positives = 462/594 (77%), Gaps = 15/594 (2%)
Query: 35 GGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRF 94
GGD+ + G L T P FVV+DA +PD PIIYVN VFEI TGYRA+EV+GRNCRF
Sbjct: 22 GGDNGAIPFPVGSL-PGTAPCGFVVSDALEPDNPIIYVNTVFEIVTGYRAEEVIGRNCRF 80
Query: 95 LQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDD 154
LQ R P A+RRHP VD +V+++R+CLE GIEFQGELLNF+KDG+PL+N+LRL PIR++D
Sbjct: 81 LQCRGPFAKRRHPNVDSTIVTKMRQCLENGIEFQGELLNFRKDGSPLMNKLRLVPIREED 140
Query: 155 GTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH---QDICG 211
+TH IG+ +F++AKIDL + ++ + ++ F+ P+ + + +CG
Sbjct: 141 -EITHFIGVLLFTDAKIDLAPS-----PDLSAKEIPRISRSFTSAL-PIGERNVSRGLCG 193
Query: 212 ILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALEL 271
I +LSDEV+A ILS+LTP D+AS+G VCRR+ +LTKN+ V +MVCQN WG E T ALE
Sbjct: 194 IFELSDEVIAIKILSQLTPGDIASVGCVCRRLNELTKNDDVWRMVCQNTWGTEATRALES 253
Query: 272 M--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQ 329
+ K++GW RLARE TT EA WRKF+V G VEPSRCNFSACA GNR+V+FGGEGVNMQ
Sbjct: 254 VPGAKRIGWVRLAREFTTHEATAWRKFSVGGTVEPSRCNFSACAVGNRIVIFGGEGVNMQ 313
Query: 330 PMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVL 389
PM+DTFVL+L +++PEW+ V V S PPGRWGHTLS +NGS LVVFGG G GLLNDVF+L
Sbjct: 314 PMNDTFVLDLGSSSPEWKSVLVSSPPPGRWGHTLSCVNGSRLVVFGGYGSHGLLNDVFLL 373
Query: 390 DLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKP 449
DLDA P+W EVSG APP+PRSWHSSC ++G+KL+VSGGC D+G LLSDT+LLDL+ D P
Sbjct: 374 DLDADPPSWREVSGLAPPIPRSWHSSCTLDGTKLIVSGGCADSGALLSDTFLLDLSMDIP 433
Query: 450 MWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQ 509
WREIP W+PPSRLGH+L+VYG K+LMFGGLAK+G LR RS + YT+DL ++EP W+
Sbjct: 434 TWREIPVPWTPPSRLGHTLTVYGDRKILMFGGLAKNGSLRFRSNDVYTMDLSEDEPSWRP 493
Query: 510 LECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPS 569
+ + G +A PPPRLDHVA+S+P GRI+IFGGS+AGL S SQL+LLDP+EEKP+
Sbjct: 494 VIGYGSSLPGGMAA--PPPRLDHVAISLPGGRILIFGGSVAGLDSASQLYLLDPTEEKPA 551
Query: 570 WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDS 623
WRILNV G PP+FAWGH+TCVVGGTR++VLGG TGEEW+LNE HEL LA+ +
Sbjct: 552 WRILNVHGGPPRFAWGHTTCVVGGTRLVVLGGQTGEEWMLNEAHELLLATSTTA 605
>gi|30680520|ref|NP_849983.1| LOV KELCH protein 2 [Arabidopsis thaliana]
gi|75162385|sp|Q8W420.1|ADO2_ARATH RecName: Full=Adagio protein 2; AltName: Full=F-box only protein
2c; Short=FBX2c; AltName: Full=Flavin-binding kelch
repeat F-box protein 1-like protein 1; Short=FKF1-like
protein 1; AltName: Full=LOV kelch protein 2
gi|18146958|dbj|BAB83169.1| LOV kelch protein 2 [Arabidopsis thaliana]
gi|20466486|gb|AAM20560.1| unknown protein [Arabidopsis thaliana]
gi|209414528|gb|ACI46504.1| At2g18915 [Arabidopsis thaliana]
gi|330251732|gb|AEC06826.1| LOV KELCH protein 2 [Arabidopsis thaliana]
Length = 611
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/591 (62%), Positives = 460/591 (77%), Gaps = 15/591 (2%)
Query: 35 GGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRF 94
GGD+ + G L T P FVV+DA +PD PIIYVN VFEI TGYRA+EV+GRNCRF
Sbjct: 26 GGDNGAIPFPVGSL-PGTAPCGFVVSDALEPDNPIIYVNTVFEIVTGYRAEEVIGRNCRF 84
Query: 95 LQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDD 154
LQ R P +RRHP+VD +V+++R+CLE GIEFQGELLNF+KDG+PL+N+LRL PIR++D
Sbjct: 85 LQCRGPFTKRRHPMVDSTIVAKMRQCLENGIEFQGELLNFRKDGSPLMNKLRLVPIREED 144
Query: 155 GTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH---QDICG 211
+TH IG+ +F++AKIDL + ++ + ++ F+ P+ + + +CG
Sbjct: 145 -EITHFIGVLLFTDAKIDLGPS-----PDLSAKEIPRISRSFTSAL-PIGERNVSRGLCG 197
Query: 212 ILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALEL 271
I +LSDEV+A ILS+LTP D+AS+G VCRR+ +LTKN+ V +MVCQN WG E T LE
Sbjct: 198 IFELSDEVIAIKILSQLTPGDIASVGCVCRRLNELTKNDDVWRMVCQNTWGTEATRVLES 257
Query: 272 M--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQ 329
+ K++GW RLARE TT EA WRKF+V G VEPSRCNFSACA GNR+V+FGGEGVNMQ
Sbjct: 258 VPGAKRIGWVRLAREFTTHEATAWRKFSVGGTVEPSRCNFSACAVGNRIVIFGGEGVNMQ 317
Query: 330 PMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVL 389
PM+DTFVL+L +++PEW+ V V S PPGRWGHTLS +NGS LVVFGG G GLLNDVF+L
Sbjct: 318 PMNDTFVLDLGSSSPEWKSVLVSSPPPGRWGHTLSCVNGSRLVVFGGYGSHGLLNDVFLL 377
Query: 390 DLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKP 449
DLDA P+W EVSG APP+PRSWHSSC ++G+KL+VSGGC D+G LLSDT+LLDL+ D P
Sbjct: 378 DLDADPPSWREVSGLAPPIPRSWHSSCTLDGTKLIVSGGCADSGALLSDTFLLDLSMDIP 437
Query: 450 MWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQ 509
WREIP W+PPSRLGH+L+VYG K+LMFGGLAK+G LR RS + YT+DL ++EP W+
Sbjct: 438 AWREIPVPWTPPSRLGHTLTVYGDRKILMFGGLAKNGTLRFRSNDVYTMDLSEDEPSWRP 497
Query: 510 LECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPS 569
+ + G +A PPPRLDHVA+S+P GRI+IFGGS+AGL S SQL+LLDP+EEKP+
Sbjct: 498 VIGYGSSLPGGMAA--PPPRLDHVAISLPGGRILIFGGSVAGLDSASQLYLLDPNEEKPA 555
Query: 570 WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
WRILNV G PP+FAWGH+TCVVGGTR++VLGG TGEEW+LNE HEL LA+
Sbjct: 556 WRILNVQGGPPRFAWGHTTCVVGGTRLVVLGGQTGEEWMLNEAHELLLATS 606
>gi|327342208|gb|AEA50891.1| ztlb [Populus tremula]
Length = 535
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/537 (68%), Positives = 430/537 (80%), Gaps = 15/537 (2%)
Query: 94 FLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDD 153
FLQ R P A+RRHPLVD VVSEIRRCL+EGIEFQGELLNF+KDG+PL+NRLRL PI D
Sbjct: 2 FLQCRGPFAKRRHPLVDSTVVSEIRRCLDEGIEFQGELLNFRKDGSPLMNRLRLTPIYGD 61
Query: 154 DGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH------- 206
D T+TH+IGIQ F+E IDL V KE+ + A F G S
Sbjct: 62 DDTITHVIGIQFFTETNIDLGPVPGSFVKESA-----KLADRFRSGLSTFRPFPAGDRNV 116
Query: 207 -QDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREV 265
+ CGILQLSDEVL +LSRLTPRD+ASI SVCRR+ LTKNE + MVCQNAWG E
Sbjct: 117 CRGTCGILQLSDEVLYLKVLSRLTPRDIASISSVCRRLYALTKNEDLWGMVCQNAWGSET 176
Query: 266 TGALELM--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGG 323
T LE + K+LGWG+LARELTTLEA WRK TV G VEPSRCNFSACA GNR+VLFGG
Sbjct: 177 TSVLETVPGAKRLGWGQLARELTTLEAAAWRKLTVGGGVEPSRCNFSACAVGNRVVLFGG 236
Query: 324 EGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL 383
EGV+MQPM+DTFVL+L++++PEW+ V V S PPGRWGHTLS +NGS LVVFGGCGRQGLL
Sbjct: 237 EGVDMQPMNDTFVLDLNSSSPEWQHVQVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLL 296
Query: 384 NDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLD 443
NDVFVLDLDAK PTW E+SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLD
Sbjct: 297 NDVFVLDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLD 356
Query: 444 LTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
L+ +KP+WREIP +W+PPSRLGH+LSVYG K+LMFGGLAKSG LR RS + +T+DL +E
Sbjct: 357 LSMEKPIWREIPVAWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEE 416
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP 563
EP W+ + + G G+ + PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL+LLDP
Sbjct: 417 EPCWRCVTGSGMPGAGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYLLDP 476
Query: 564 SEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
S+EKP+WRILNVPG+PP+FAWGHSTCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 477 SDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASS 533
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ PSR S G +V++FGG G +++ +DL
Sbjct: 200 TLEAAAWRKLTVGGGVEPSRCNFSACAVG-NRVVLFGG---EGVDMQPMNDTFVLDLNSS 255
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ + Q + PP R H + +++FGG GL + +F+LD
Sbjct: 256 SPEWQHV----------QVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLN--DVFVLD 303
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 304 LDAKPPTWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 361
>gi|124359373|gb|ABN05839.1| Speract/scavenger receptor; Cyclin-like F-box; Galactose oxidase,
central [Medicago truncatula]
Length = 568
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/533 (66%), Positives = 429/533 (80%), Gaps = 5/533 (0%)
Query: 93 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRD 152
RFLQ R P A+RRHPLVD V+SEIR+C++EG+EFQGELLNF+KDG+PL+NRLRL PI
Sbjct: 34 RFLQCRGPFAKRRHPLVDSSVISEIRKCIDEGVEFQGELLNFRKDGSPLMNRLRLTPIYG 93
Query: 153 DDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH---QDI 209
+D +TH+IGIQ+F+EA IDL + KE+ + S PL + I
Sbjct: 94 EDDEITHVIGIQLFTEANIDLGPLPGSTIKESLKSSGRFHSVLSSLQPPPLGDRNVSRGI 153
Query: 210 CGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGAL 269
CGI QLSDEVL+ IL+RLTPRD+AS+ SVC R+ ++T+NE + +MVCQNAWG E T L
Sbjct: 154 CGIFQLSDEVLSLKILARLTPRDIASVSSVCTRLYEVTRNEDLWRMVCQNAWGSETTRVL 213
Query: 270 ELM--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVN 327
E + K+LGWGRLARELTTLEA WRK TV G VEPSRCNFSACA GNR+VLFGGEGVN
Sbjct: 214 ETVPGAKRLGWGRLARELTTLEAAAWRKLTVGGGVEPSRCNFSACAVGNRVVLFGGEGVN 273
Query: 328 MQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVF 387
MQPM+DTFVL+L++ NPEW+ V V S PPGRWGHTLS +NGS LVVFGGCG QGLLNDVF
Sbjct: 274 MQPMNDTFVLDLNSNNPEWQHVQVSSPPPGRWGHTLSCVNGSRLVVFGGCGTQGLLNDVF 333
Query: 388 VLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD 447
VLDLDA PTW E+SG APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLD++ +
Sbjct: 334 VLDLDATPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDMSME 393
Query: 448 KPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW 507
P+WREIP +W+PPSRLGH+LSVYG K+LMFGGLAKSG LR RS + +T+DL ++EP W
Sbjct: 394 NPVWREIPVTWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEDEPCW 453
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEK 567
+ + + G G+ + PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL++LDP++EK
Sbjct: 454 RCVTGSGMPGAGNPEGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEK 513
Query: 568 PSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
P+WRILNVPG+PP+FAWGHSTCVVGGTR +VLGG TGEEW+L++LHEL LA+
Sbjct: 514 PTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSDLHELSLANS 566
>gi|13487070|gb|AAK27434.1|AF252295_1 Adagio 2 [Arabidopsis thaliana]
gi|20197042|gb|AAM14891.1| F-box protein LKP2/ADO2, AtFBX2c [Arabidopsis thaliana]
Length = 597
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/591 (60%), Positives = 452/591 (76%), Gaps = 25/591 (4%)
Query: 35 GGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRF 94
GGD+ + G L T P FVV+DA +PD PIIYVN VFEI TGYRA+EV+G
Sbjct: 22 GGDNGAIPFPVGSL-PGTAPCGFVVSDALEPDNPIIYVNTVFEIVTGYRAEEVIG----- 75
Query: 95 LQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDD 154
P +RRHP+VD +V+++R+CLE GIEFQGELLNF+KDG+PL+N+LRL PIR++D
Sbjct: 76 -----PFTKRRHPMVDSTIVAKMRQCLENGIEFQGELLNFRKDGSPLMNKLRLVPIREED 130
Query: 155 GTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH---QDICG 211
+TH IG+ +F++AKIDL + ++ + ++ F+ P+ + + +CG
Sbjct: 131 -EITHFIGVLLFTDAKIDLGPS-----PDLSAKEIPRISRSFTSAL-PIGERNVSRGLCG 183
Query: 212 ILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALEL 271
I +LSDEV+A ILS+LTP D+AS+G VCRR+ +LTKN+ V +MVCQN WG E T LE
Sbjct: 184 IFELSDEVIAIKILSQLTPGDIASVGCVCRRLNELTKNDDVWRMVCQNTWGTEATRVLES 243
Query: 272 M--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQ 329
+ K++GW RLARE TT EA WRKF+V G VEPSRCNFSACA GNR+V+FGGEGVNMQ
Sbjct: 244 VPGAKRIGWVRLAREFTTHEATAWRKFSVGGTVEPSRCNFSACAVGNRIVIFGGEGVNMQ 303
Query: 330 PMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVL 389
PM+DTFVL+L +++PEW+ V V S PPGRWGHTLS +NGS LVVFGG G GLLNDVF+L
Sbjct: 304 PMNDTFVLDLGSSSPEWKSVLVSSPPPGRWGHTLSCVNGSRLVVFGGYGSHGLLNDVFLL 363
Query: 390 DLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKP 449
DLDA P+W EVSG APP+PRSWHSSC ++G+KL+VSGGC D+G LLSDT+LLDL+ D P
Sbjct: 364 DLDADPPSWREVSGLAPPIPRSWHSSCTLDGTKLIVSGGCADSGALLSDTFLLDLSMDIP 423
Query: 450 MWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQ 509
WREIP W+PPSRLGH+L+VYG K+LMFGGLAK+G LR RS + YT+DL ++EP W+
Sbjct: 424 AWREIPVPWTPPSRLGHTLTVYGDRKILMFGGLAKNGTLRFRSNDVYTMDLSEDEPSWRP 483
Query: 510 LECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPS 569
+ + G +A PPPRLDHVA+S+P GRI+IFGGS+AGL S SQL+LLDP+EEKP+
Sbjct: 484 VIGYGSSLPGGMAA--PPPRLDHVAISLPGGRILIFGGSVAGLDSASQLYLLDPNEEKPA 541
Query: 570 WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
WRILNV G PP+FAWGH+TCVVGGTR++VLGG TGEEW+LNE HEL LA+
Sbjct: 542 WRILNVQGGPPRFAWGHTTCVVGGTRLVVLGGQTGEEWMLNEAHELLLATS 592
>gi|30680514|ref|NP_565444.2| LOV KELCH protein 2 [Arabidopsis thaliana]
gi|330251731|gb|AEC06825.1| LOV KELCH protein 2 [Arabidopsis thaliana]
Length = 601
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/591 (60%), Positives = 452/591 (76%), Gaps = 25/591 (4%)
Query: 35 GGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRF 94
GGD+ + G L T P FVV+DA +PD PIIYVN VFEI TGYRA+EV+G
Sbjct: 26 GGDNGAIPFPVGSL-PGTAPCGFVVSDALEPDNPIIYVNTVFEIVTGYRAEEVIG----- 79
Query: 95 LQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDD 154
P +RRHP+VD +V+++R+CLE GIEFQGELLNF+KDG+PL+N+LRL PIR++D
Sbjct: 80 -----PFTKRRHPMVDSTIVAKMRQCLENGIEFQGELLNFRKDGSPLMNKLRLVPIREED 134
Query: 155 GTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH---QDICG 211
+TH IG+ +F++AKIDL + ++ + ++ F+ P+ + + +CG
Sbjct: 135 -EITHFIGVLLFTDAKIDLGPS-----PDLSAKEIPRISRSFTSAL-PIGERNVSRGLCG 187
Query: 212 ILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALEL 271
I +LSDEV+A ILS+LTP D+AS+G VCRR+ +LTKN+ V +MVCQN WG E T LE
Sbjct: 188 IFELSDEVIAIKILSQLTPGDIASVGCVCRRLNELTKNDDVWRMVCQNTWGTEATRVLES 247
Query: 272 M--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQ 329
+ K++GW RLARE TT EA WRKF+V G VEPSRCNFSACA GNR+V+FGGEGVNMQ
Sbjct: 248 VPGAKRIGWVRLAREFTTHEATAWRKFSVGGTVEPSRCNFSACAVGNRIVIFGGEGVNMQ 307
Query: 330 PMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVL 389
PM+DTFVL+L +++PEW+ V V S PPGRWGHTLS +NGS LVVFGG G GLLNDVF+L
Sbjct: 308 PMNDTFVLDLGSSSPEWKSVLVSSPPPGRWGHTLSCVNGSRLVVFGGYGSHGLLNDVFLL 367
Query: 390 DLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKP 449
DLDA P+W EVSG APP+PRSWHSSC ++G+KL+VSGGC D+G LLSDT+LLDL+ D P
Sbjct: 368 DLDADPPSWREVSGLAPPIPRSWHSSCTLDGTKLIVSGGCADSGALLSDTFLLDLSMDIP 427
Query: 450 MWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQ 509
WREIP W+PPSRLGH+L+VYG K+LMFGGLAK+G LR RS + YT+DL ++EP W+
Sbjct: 428 AWREIPVPWTPPSRLGHTLTVYGDRKILMFGGLAKNGTLRFRSNDVYTMDLSEDEPSWRP 487
Query: 510 LECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPS 569
+ + G +A PPPRLDHVA+S+P GRI+IFGGS+AGL S SQL+LLDP+EEKP+
Sbjct: 488 VIGYGSSLPGGMAA--PPPRLDHVAISLPGGRILIFGGSVAGLDSASQLYLLDPNEEKPA 545
Query: 570 WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
WRILNV G PP+FAWGH+TCVVGGTR++VLGG TGEEW+LNE HEL LA+
Sbjct: 546 WRILNVQGGPPRFAWGHTTCVVGGTRLVVLGGQTGEEWMLNEAHELLLATS 596
>gi|297737625|emb|CBI26826.3| unnamed protein product [Vitis vinifera]
Length = 507
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/471 (76%), Positives = 378/471 (80%), Gaps = 57/471 (12%)
Query: 46 GLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRR 105
G FYPT P++FVV+D + DFPIIYVN VFE TGYRADEVLGRNCRFLQYRDPRAQRR
Sbjct: 36 GSFFYPTVPSAFVVSDVLETDFPIIYVNSVFETSTGYRADEVLGRNCRFLQYRDPRAQRR 95
Query: 106 HPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
HPLVDPVVVSEIRRCLEEGIEFQGELLNF+KDGTPLVN+LRLAPI DDDG VTHIIGIQ+
Sbjct: 96 HPLVDPVVVSEIRRCLEEGIEFQGELLNFRKDGTPLVNQLRLAPIHDDDGVVTHIIGIQV 155
Query: 166 FSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNIL 225
FSEAKIDLNHVSYPVFKE DQS Y
Sbjct: 156 FSEAKIDLNHVSYPVFKETGYPHVDQSGNY------------------------------ 185
Query: 226 SRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLAREL 285
+ NEHVRKMVCQN+WGREVTG LELMTKKLGWGRLAREL
Sbjct: 186 ---------------------SPNEHVRKMVCQNSWGREVTGTLELMTKKLGWGRLAREL 224
Query: 286 TTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE 345
TTLEAVCW+K TV GAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE
Sbjct: 225 TTLEAVCWKKMTVGGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE 284
Query: 346 WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGA 405
WR+VSVKSSPPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVFVLDLDAK PTW EV GG
Sbjct: 285 WRQVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAKHPTWKEVFGGT 344
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLG 465
PPLPRSWHSSC IEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSW+PPSRLG
Sbjct: 345 PPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWAPPSRLG 404
Query: 466 HSLSVYGRTKVLMFGGLAKSGHLRLRSG------ESYTIDLGDEEPQWKQL 510
HSLSVYGRTK+LMFGGLAKSGHLRLRS + + +D +E+P W+ L
Sbjct: 405 HSLSVYGRTKILMFGGLAKSGHLRLRSAGLHSPSQLFLLDPSEEKPSWRIL 455
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAG-NRLVLFGG---------EGVNMQPMDDTFV 336
T + WR+ A PSR S G ++++FGG + F+
Sbjct: 384 TTDKPMWREIPTSWA-PPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSAGLHSPSQLFL 442
Query: 337 LNLDAANPEWRRVSVKSSPPG-RWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLDAK 394
L+ P WR ++V PP WGH+ + G+ ++V GG G + +LN++ L L ++
Sbjct: 443 LDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASR 502
Query: 395 Q 395
Q
Sbjct: 503 Q 503
>gi|149981050|gb|ABR53779.1| flavin-binding kelch repeat F-box 1 [Phaseolus vulgaris]
Length = 359
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/357 (92%), Positives = 339/357 (94%)
Query: 213 LQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM 272
LQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWG+EVTG LELM
Sbjct: 1 LQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGKEVTGTLELM 60
Query: 273 TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMD 332
TKKLGWGRL RELTTLEAVCWRK TV GAVEPSRCNFSACAAGNRLVLFGGEGV+MQPMD
Sbjct: 61 TKKLGWGRLTRELTTLEAVCWRKMTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMD 120
Query: 333 DTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLD 392
DTFVLNLDA NPEWRRV VKSSPPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVFVLDLD
Sbjct: 121 DTFVLNLDAKNPEWRRVIVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLD 180
Query: 393 AKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWR 452
A+QPTW EV GG PPLPRSWHSSC IEGSKLVVSGGCTDAGVLLSDTYLLDLT D P WR
Sbjct: 181 AQQPTWREVCGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDNPTWR 240
Query: 453 EIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLEC 512
EIPTSW+PPSRLGHSLSVYGRTK+LMFGGLAKSGHLRLRSGE+YTIDL DEEPQW+QLE
Sbjct: 241 EIPTSWAPPSRLGHSLSVYGRTKLLMFGGLAKSGHLRLRSGEAYTIDLEDEEPQWRQLEY 300
Query: 513 NAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPS 569
+AFTG+ SQS VVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPS
Sbjct: 301 SAFTGLASQSGVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPS 357
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 398 WIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS 457
W +++ G P + S G++LV+ GG + DT++L+L P WR +
Sbjct: 81 WRKMTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVIVK 140
Query: 458 WSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTG 517
SPP R GH+LS + +++FGG + G L + + +DL ++P W+++ C
Sbjct: 141 SSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLN----DVFVLDLDAQQPTWREV-CGG--- 192
Query: 518 VGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPG 577
P PR H + ++ ++++ GG S +LLD + + P+WR +
Sbjct: 193 ------TPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDNPTWREIPTSW 246
Query: 578 QPPKFAWGHSTCVVGGTRVLVLGG 601
PP GHS V G T++L+ GG
Sbjct: 247 APPSRL-GHSLSVYGRTKLLMFGG 269
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G ++++FGG G +++ ++L +
Sbjct: 75 TLEAVCWRKMTVGGAVEPSRCNFSACAAG-NRLVLFGG---EGVDMQPMDDTFVLNLDAK 130
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+++ + PP R H + +++FGG GL + +F+LD
Sbjct: 131 NPEWRRVIVKS----------SPPGRWGHTLSCLNGSWLVVFGGCGRQGLLN--DVFVLD 178
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLA 618
++P+WR + G PP HS+C + G++++V GG T +L++ + L L
Sbjct: 179 LDAQQPTWREV-CGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLT 233
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 523 AVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKF 582
V P R + A + R+++FGG + F+L+ + P WR + V PP
Sbjct: 88 GAVEPSRCNFSACAAG-NRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVIVKSSPPG- 145
Query: 583 AWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
WGH+ + G+ ++V GG G + +LN++ L L ++Q
Sbjct: 146 RWGHTLSCLNGSWLVVFGG-CGRQGLLNDVFVLDLDAQQ 183
>gi|339778589|gb|AEK06176.1| zeitlupe 1 [Populus balsamifera]
gi|339778591|gb|AEK06177.1| zeitlupe 1 [Populus balsamifera]
gi|339778593|gb|AEK06178.1| zeitlupe 1 [Populus balsamifera]
gi|339778595|gb|AEK06179.1| zeitlupe 1 [Populus balsamifera]
gi|339778597|gb|AEK06180.1| zeitlupe 1 [Populus balsamifera]
gi|339778599|gb|AEK06181.1| zeitlupe 1 [Populus balsamifera]
gi|339778601|gb|AEK06182.1| zeitlupe 1 [Populus balsamifera]
gi|339778603|gb|AEK06183.1| zeitlupe 1 [Populus balsamifera]
gi|339778605|gb|AEK06184.1| zeitlupe 1 [Populus balsamifera]
gi|339778607|gb|AEK06185.1| zeitlupe 1 [Populus balsamifera]
gi|339778609|gb|AEK06186.1| zeitlupe 1 [Populus balsamifera]
gi|339778611|gb|AEK06187.1| zeitlupe 1 [Populus balsamifera]
gi|339778613|gb|AEK06188.1| zeitlupe 1 [Populus balsamifera]
gi|339778615|gb|AEK06189.1| zeitlupe 1 [Populus balsamifera]
gi|339778617|gb|AEK06190.1| zeitlupe 1 [Populus balsamifera]
gi|339778619|gb|AEK06191.1| zeitlupe 1 [Populus balsamifera]
gi|339778623|gb|AEK06193.1| zeitlupe 1 [Populus balsamifera]
gi|339778625|gb|AEK06194.1| zeitlupe 1 [Populus balsamifera]
gi|339778627|gb|AEK06195.1| zeitlupe 1 [Populus balsamifera]
gi|339778629|gb|AEK06196.1| zeitlupe 1 [Populus balsamifera]
gi|339778631|gb|AEK06197.1| zeitlupe 1 [Populus balsamifera]
gi|339778633|gb|AEK06198.1| zeitlupe 1 [Populus balsamifera]
Length = 470
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/472 (68%), Positives = 388/472 (82%), Gaps = 9/472 (1%)
Query: 142 VNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHS 201
+NRLRL PI +D T+TH+IGIQ F+EA IDL V KE+ ++ D+ FS +
Sbjct: 1 MNRLRLTPIYGEDDTITHVIGIQFFTEANIDLGPVPGYSVKES-SKLADKFRSGFST-YR 58
Query: 202 PL-----SQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMV 256
P+ + + ICGILQLSDEVL+ ILSRLTPRD+ASIGSVCR++ +LTKNE + +MV
Sbjct: 59 PIPVGDRNVSRGICGILQLSDEVLSLKILSRLTPRDIASIGSVCRQLYELTKNEDLWRMV 118
Query: 257 CQNAWGREVTGALELM--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAA 314
CQNAWG E T LE + K+LGWGRLARELTTLEA WRK TV G+VEPSRCNFSACA
Sbjct: 119 CQNAWGSETTRVLETVPGAKRLGWGRLARELTTLEAATWRKLTVGGSVEPSRCNFSACAV 178
Query: 315 GNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVF 374
GNR+VLFGGEGVNMQPM+DTFVL+L+++NPEW+ V V S PPGRWGHTLS +NGS LVVF
Sbjct: 179 GNRVVLFGGEGVNMQPMNDTFVLDLNSSNPEWQHVHVSSPPPGRWGHTLSCVNGSHLVVF 238
Query: 375 GGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGV 434
GGCGRQGLLNDVF+LDLDAK PTW E+SG APPLPRSWHSSC ++G+KL+VSGGC D+GV
Sbjct: 239 GGCGRQGLLNDVFILDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGV 298
Query: 435 LLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGE 494
LLSDT+LLDL+ +KP+WREIP SW+PPSRLGH+LSVYG K+LMFGGLAKSG LR RS +
Sbjct: 299 LLSDTFLLDLSMEKPIWREIPVSWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSD 358
Query: 495 SYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHS 554
+T+DL +EEP W+ + + G G+ S + PPPRLDHVAVS+P GRI+IFGGS+AGLHS
Sbjct: 359 VFTMDLSEEEPCWRCVTGSGMPGAGNPSGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHS 418
Query: 555 PSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEE 606
SQL+LLDP++EKP+WRILNVPG+PP+FAWGHSTCVVGGTR +VLGG TGEE
Sbjct: 419 ASQLYLLDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEE 470
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ S PSR S G +V++FGG G +++ +DL
Sbjct: 151 TLEAATWRKLTVGGSVEPSRCNFSACAVG-NRVVLFGG---EGVNMQPMNDTFVLDLNSS 206
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ + ++ PP R H + +++FGG GL + +F+LD
Sbjct: 207 NPEWQHVHVSS----------PPPGRWGHTLSCVNGSHLVVFGGCGRQGLLN--DVFILD 254
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 255 LDAKPPTWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 312
>gi|339778621|gb|AEK06192.1| zeitlupe 1 [Populus balsamifera]
Length = 470
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/472 (68%), Positives = 388/472 (82%), Gaps = 9/472 (1%)
Query: 142 VNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHS 201
+NRLRL PI +D T+TH+IGIQ F+EA IDL V KE+ ++ D+ FS +
Sbjct: 1 MNRLRLTPIYGEDDTITHVIGIQFFTEANIDLGPVPGYSVKES-SKLADKFRSGFST-YR 58
Query: 202 PL-----SQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMV 256
P+ + + ICGILQLSDEVL+ ILSRLTPRD+ASIGSVCR++ +LTKNE + +MV
Sbjct: 59 PIPVGDRNVSRGICGILQLSDEVLSLKILSRLTPRDIASIGSVCRQLYELTKNEDLWRMV 118
Query: 257 CQNAWGREVTGALELM--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAA 314
CQNAWG E T LE + K+LGWGRLARELTTLEA WRK TV G+VEPSRCNFSACA
Sbjct: 119 CQNAWGSETTRVLETVPGAKRLGWGRLARELTTLEAATWRKLTVGGSVEPSRCNFSACAV 178
Query: 315 GNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVF 374
GNR+VLFGGEGVNMQPM+DTFVL+L+++NPEW+ V V S PPGRWGHTLS +NGS LVVF
Sbjct: 179 GNRVVLFGGEGVNMQPMNDTFVLDLNSSNPEWQHVHVSSPPPGRWGHTLSCVNGSHLVVF 238
Query: 375 GGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGV 434
GGCGRQGLLNDVF+LDLDAK PTW E+SG APP+PRSWHSSC ++G+KL+VSGGC D+GV
Sbjct: 239 GGCGRQGLLNDVFILDLDAKPPTWREISGLAPPVPRSWHSSCTLDGTKLIVSGGCADSGV 298
Query: 435 LLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGE 494
LLSDT+LLDL+ +KP+WREIP SW+PPSRLGH+LSVYG K+LMFGGLAKSG LR RS +
Sbjct: 299 LLSDTFLLDLSMEKPIWREIPVSWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSD 358
Query: 495 SYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHS 554
+T+DL +EEP W+ + + G G+ S + PPPRLDHVAVS+P GRI+IFGGS+AGLHS
Sbjct: 359 VFTMDLSEEEPCWRCVTGSGMPGAGNPSGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHS 418
Query: 555 PSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEE 606
SQL+LLDP++EKP+WRILNVPG+PP+FAWGHSTCVVGGTR +VLGG TGEE
Sbjct: 419 ASQLYLLDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEE 470
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ S PSR S G +V++FGG G +++ +DL
Sbjct: 151 TLEAATWRKLTVGGSVEPSRCNFSACAVG-NRVVLFGG---EGVNMQPMNDTFVLDLNSS 206
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+ + ++ PP R H + +++FGG GL + +F+LD
Sbjct: 207 NPEWQHVHVSS----------PPPGRWGHTLSCVNGSHLVVFGGCGRQGLLN--DVFILD 254
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ P+WR ++ P +W HS+C + GT+++V GG +L++ L L+ ++
Sbjct: 255 LDAKPPTWREISGLAPPVPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 312
>gi|297598599|ref|NP_001045904.2| Os02g0150800 [Oryza sativa Japonica Group]
gi|255670607|dbj|BAF07818.2| Os02g0150800 [Oryza sativa Japonica Group]
Length = 483
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/482 (64%), Positives = 383/482 (79%), Gaps = 8/482 (1%)
Query: 144 RLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQY---DQSAQYFSGGH 200
+L+L PI DD T+TH +G+Q F+++ +DL +S KE D + + G
Sbjct: 3 KLQLTPIYGDDETITHYMGMQFFNDSNVDLGPLSVSTTKEIVRSTLITPDNTIRPSPMGK 62
Query: 201 SPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNA 260
S+H D+ LSDEVL ILSRL+PRD+AS+ SVC+R+ LT+N+ + +MVCQNA
Sbjct: 63 GFCSEHSDL---FLLSDEVLCQKILSRLSPRDIASVNSVCKRLYHLTRNDDLWRMVCQNA 119
Query: 261 WGREVTGALELM--TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRL 318
WG E T LE + T+ L WGRLARELTTLEAV WRK TV GAVEPSRCNFSACAAGNR+
Sbjct: 120 WGSEATQVLETVAGTRSLAWGRLARELTTLEAVTWRKLTVGGAVEPSRCNFSACAAGNRV 179
Query: 319 VLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCG 378
VLFGGEGVNMQPM+DTFVL+L+A+ PEWR ++V+S+PPGRWGHTLS LNGS LV+FGGCG
Sbjct: 180 VLFGGEGVNMQPMNDTFVLDLNASKPEWRHINVRSAPPGRWGHTLSCLNGSRLVLFGGCG 239
Query: 379 RQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSD 438
RQGLLNDVF+LDLDA+QPTW E+ G APP+PRSWHSSC ++G+KLVVSGGC D+GVLLSD
Sbjct: 240 RQGLLNDVFMLDLDAQQPTWREIPGLAPPVPRSWHSSCTLDGTKLVVSGGCADSGVLLSD 299
Query: 439 TYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTI 498
TYLLD+T ++P+WREIP SW+PP RLGHSLSVY K+LMFGGLAKSG LRLRS + +T+
Sbjct: 300 TYLLDVTMERPVWREIPASWTPPCRLGHSLSVYDGRKILMFGGLAKSGPLRLRSNDVFTL 359
Query: 499 DLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQL 558
DL + +P W+ + + G + + V PPPRLDHVAVS+P GRI+IFGGS+AGLHS S+L
Sbjct: 360 DLSENKPCWRCITGSGMPGASNPAGVGPPPRLDHVAVSLPGGRILIFGGSVAGLHSASKL 419
Query: 559 FLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLA 618
+LLDP+EEKP+WRILNVPG+PP+FAWGHSTCVVGGT+ +VLGG TGEEW L ELHEL L
Sbjct: 420 YLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVVGGTKAIVLGGQTGEEWTLTELHELSLV 479
Query: 619 SK 620
S
Sbjct: 480 SS 481
>gi|296081764|emb|CBI20769.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 330/584 (56%), Positives = 408/584 (69%), Gaps = 70/584 (11%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T P FVV+DA +PDFPIIYVN FE+ TGYRA+E+LGRNCRFLQ R P A+RRH LVD
Sbjct: 37 TAPCGFVVSDALEPDFPIIYVNTGFELVTGYRAEEILGRNCRFLQCRGPFAKRRHQLVDS 96
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
VVSEIRRCLE G+EFQG+LLNF+KDG+PL+NRLRL PI DD T+TH+IGIQ F+EA +
Sbjct: 97 TVVSEIRRCLELGVEFQGDLLNFRKDGSPLMNRLRLTPIYGDDKTITHVIGIQFFTEANL 156
Query: 172 DLNHVSYPVFKENCNQQYDQSAQYFSGGHSP---LSQHQDICGILQLSDEVLAHNILSRL 228
DL + V KE+ S+ S P ++ ++C + QLSDEVL+H ILSRL
Sbjct: 157 DLGPLPGSVTKESYRSFDRFSSDLMSSRSIPSGSVNAGHEVCEMFQLSDEVLSHKILSRL 216
Query: 229 TPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELT 286
TPRD+AS+ SVC+R+ QLTKNE + ++VCQNAWG E T LE + K+LGW RLARELT
Sbjct: 217 TPRDIASVASVCKRLYQLTKNEDLWRLVCQNAWGCETTRVLETVPGAKRLGWVRLARELT 276
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
T L+AA W
Sbjct: 277 T---------------------------------------------------LEAA--AW 283
Query: 347 RRVSVKSS-PPGRWGHTLSSLNGSWLVVFGGCG-RQGLLNDVFVLDLDA--------KQP 396
R+++V + P R + ++ G+ +V+FGG G +ND FVLDL+A K P
Sbjct: 284 RKLTVGGAVEPSRCNFSACAV-GNRVVLFGGEGVNMQPMNDTFVLDLNATNPEWQHVKHP 342
Query: 397 TWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT-DKPMWREIP 455
TW E+SG APPLPRSWHSSC ++G+KLVVSGGC D+GVLLSDT+LLDL T +KP+WREIP
Sbjct: 343 TWREISGLAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLDLATIEKPVWREIP 402
Query: 456 TSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAF 515
+W+PPSRLGHSLSVYG K+LMFGGLAKSG LR RS + +T+DL +EEP W+ + +
Sbjct: 403 VAWTPPSRLGHSLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGM 462
Query: 516 TGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNV 575
G G+ + PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQ +LLDP++EKP+WRILNV
Sbjct: 463 PGSGNPAGTAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQSYLLDPTDEKPTWRILNV 522
Query: 576 PGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
PG+PP+FAWGHSTCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 523 PGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLAS 566
>gi|413934698|gb|AFW69249.1| hypothetical protein ZEAMMB73_611049 [Zea mays]
Length = 408
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 293/406 (72%), Positives = 347/406 (85%), Gaps = 2/406 (0%)
Query: 218 EVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKK 275
+ A +ILSRL+PRD+AS+ SVCRR+ LT+NE + +MVCQNAWG E T ALE + ++
Sbjct: 2 KCFAKSILSRLSPRDIASVSSVCRRLYDLTRNEDLWRMVCQNAWGSETTRALETVPAARR 61
Query: 276 LGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTF 335
LGWGRLARELTTLEAV WRK TV GAVEPSRCNFSACA GNR+VLFGGEGVNMQPM+DTF
Sbjct: 62 LGWGRLARELTTLEAVAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTF 121
Query: 336 VLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQ 395
VL+L+A+NPEWR + V ++PPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVF+LDLDAKQ
Sbjct: 122 VLDLNASNPEWRHIDVSAAPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFMLDLDAKQ 181
Query: 396 PTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP 455
PTW E+ G APP+PRSWHSSC ++G+KLVVSGGC D+GVLLSDTYLLD+ D+P+WRE+P
Sbjct: 182 PTWREIPGVAPPVPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVAMDRPVWREVP 241
Query: 456 TSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAF 515
SW PPSRLGHS+SVYG K+LMFGGLAKSG LRLRS + YT+DL +EE W+ L +
Sbjct: 242 ASWKPPSRLGHSMSVYGGRKILMFGGLAKSGPLRLRSSDVYTMDLSEEEFCWRCLTGSGM 301
Query: 516 TGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNV 575
G G+ + PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL+LLDP+EEKP+WRILN+
Sbjct: 302 PGAGNPAGAGPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYLLDPTEEKPTWRILNI 361
Query: 576 PGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
PG+PP+FAWGHSTCVVGGT+ +VLGG TGEEW+L E+HEL L S+
Sbjct: 362 PGRPPRFAWGHSTCVVGGTKAIVLGGQTGEEWMLTEIHELSLVSRS 407
>gi|149981054|gb|ABR53781.1| flavin-binding kelch repeat F-box 1 [Phaseolus vulgaris]
Length = 318
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 289/318 (90%), Positives = 298/318 (93%)
Query: 213 LQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM 272
LQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWG+EVTG LELM
Sbjct: 1 LQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGKEVTGTLELM 60
Query: 273 TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMD 332
TKKLGWGRL RELTTLEAVCWRK TV GAVEPSRCNFSACAAGNRLVLFGGEGV+MQPMD
Sbjct: 61 TKKLGWGRLTRELTTLEAVCWRKMTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMD 120
Query: 333 DTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLD 392
DTFVLNLDA NPEWRRV VKSSPPGRWGHTLS LNGSWLVVFGGCGRQGLLNDVFVLDLD
Sbjct: 121 DTFVLNLDAKNPEWRRVIVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLD 180
Query: 393 AKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWR 452
A+QPTW EV GG PPLPRSWHSSC IEGSKLVVSGGCTDAGVLLSDTYLLDLT D P WR
Sbjct: 181 AQQPTWREVCGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDNPTWR 240
Query: 453 EIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLEC 512
EIPTSW+PPSRLGHSLSVYGRTK+LMFGGLAKSG L LRSGE+YTIDL DEEPQW+QLE
Sbjct: 241 EIPTSWAPPSRLGHSLSVYGRTKLLMFGGLAKSGXLXLRSGEAYTIDLEDEEPQWRQLEY 300
Query: 513 NAFTGVGSQSAVVPPPRL 530
+AFTG+ SQS VVPPPRL
Sbjct: 301 SAFTGLASQSGVVPPPRL 318
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 398 WIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS 457
W +++ G P + S G++LV+ GG + DT++L+L P WR +
Sbjct: 81 WRKMTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVIVK 140
Query: 458 WSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTG 517
SPP R GH+LS + +++FGG + G L + + +DL ++P W+++ C
Sbjct: 141 SSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLN----DVFVLDLDAQQPTWREV-CGG--- 192
Query: 518 VGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPG 577
P PR H + ++ ++++ GG S +LLD + + P+WR +
Sbjct: 193 ------TPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDNPTWREIPTSW 246
Query: 578 QPPKFAWGHSTCVVGGTRVLVLGG 601
PP GHS V G T++L+ GG
Sbjct: 247 APPSRL-GHSLSVYGRTKLLMFGG 269
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 445 TTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
T + WR++ + PSR S G ++++FGG G +++ ++L +
Sbjct: 75 TLEAVCWRKMTVGGAVEPSRCNFSACAAG-NRLVLFGG---EGVDMQPMDDTFVLNLDAK 130
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLD 562
P+W+++ + PP R H + +++FGG GL + +F+LD
Sbjct: 131 NPEWRRVIVKS----------SPPGRWGHTLSCLNGSWLVVFGGCGRQGLLN--DVFVLD 178
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLA 618
++P+WR + G PP HS+C + G++++V GG T +L++ + L L
Sbjct: 179 LDAQQPTWREV-CGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLT 233
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 524 VVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFA 583
V P R + A + R+++FGG + F+L+ + P WR + V PP
Sbjct: 89 AVEPSRCNFSACAAG-NRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVIVKSSPPG-R 146
Query: 584 WGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
WGH+ + G+ ++V GG G + +LN++ L L ++Q
Sbjct: 147 WGHTLSCLNGSWLVVFGG-CGRQGLLNDVFVLDLDAQQ 183
>gi|125580826|gb|EAZ21757.1| hypothetical protein OsJ_05393 [Oryza sativa Japonica Group]
Length = 591
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 309/576 (53%), Positives = 388/576 (67%), Gaps = 72/576 (12%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
VV+DA DPDFPIIYVN+ FE TGY A+EVLGRNCRFLQ R P A+RRHPLVD VV++
Sbjct: 56 LVVSDALDPDFPIIYVNRGFEEATGYHAEEVLGRNCRFLQCRGPFAKRRHPLVDTTVVTD 115
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHV 176
IRRCLEEG FQG+LLNF+KDG+P + +L+L PI DD T+TH +G+Q F+++ +DL +
Sbjct: 116 IRRCLEEGTVFQGDLLNFRKDGSPFMAKLQLTPIYGDDETITHYMGMQFFNDSNVDLGPL 175
Query: 177 SYPVFKENCNQQY---DQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDV 233
S KE D + + G S+H D+ LSDEVL ILSRL+PRD+
Sbjct: 176 SVSTTKEIVRSTLITPDNTIRPSPMGKGFCSEHSDL---FLLSDEVLCQKILSRLSPRDI 232
Query: 234 ASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELM--TKKLGWGRLARELTTLEAV 291
AS+ SVC+R+ LT+N+ + +MVCQNAWG E T LE + T+ L WGRLARELTTLEAV
Sbjct: 233 ASVNSVCKRLYHLTRNDDLWRMVCQNAWGSEATQVLETVAGTRSLAWGRLARELTTLEAV 292
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
WR+++V
Sbjct: 293 -----------------------------------------------------TWRKLTV 299
Query: 352 KSS-PPGRWGHTLSSLNGSWLVVFGGCG-RQGLLNDVFVLDLDA--------KQPTWIEV 401
+ P R + + G+ +V+FGG G +ND FVLDL+A QPTW E+
Sbjct: 300 GGAVEPSRCNFSACA-AGNRVVLFGGEGVNMQPMNDTFVLDLNASKPEWRHINQPTWREI 358
Query: 402 SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPP 461
G APP+PRSWHSSC ++G+KLVVSGGC D+GVLLSDTYLLD+T ++P+WREIP SW+PP
Sbjct: 359 PGLAPPVPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMERPVWREIPASWTPP 418
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
RLGHSLSVY K+LMFGGLAKSG LRLRS + +T+DL + +P W+ + + G +
Sbjct: 419 CRLGHSLSVYDGRKILMFGGLAKSGPLRLRSNDVFTLDLSENKPCWRCITGSGMPGASNP 478
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
+ V PPPRLDHVAVS+P GRI+IFGGS+AGLHS S+L+LLDP+EEKP+WRILNVPG+PP+
Sbjct: 479 AGVGPPPRLDHVAVSLPGGRILIFGGSVAGLHSASKLYLLDPTEEKPTWRILNVPGRPPR 538
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCL 617
FAWGHSTCVVGGT+ +VLGG TGEEW L ELHEL L
Sbjct: 539 FAWGHSTCVVGGTKAIVLGGQTGEEWTLTELHELSL 574
>gi|293338345|gb|ADE43413.1| putative ZTL [Picea likiangensis]
Length = 301
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/301 (77%), Positives = 264/301 (87%)
Query: 324 EGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL 383
EGVNMQPM+DTFVL+L AANPEWR V+V S PPGRWGHTLS LNGSWLVVFGGCGRQGLL
Sbjct: 1 EGVNMQPMNDTFVLDLSAANPEWRHVNVSSPPPGRWGHTLSCLNGSWLVVFGGCGRQGLL 60
Query: 384 NDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLD 443
NDVF+LDLDA+QPTW EV+G APPLPRSWHSSC ++G+KLVVSGGC D+GVLLSDT+LLD
Sbjct: 61 NDVFILDLDAQQPTWREVAGSAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLD 120
Query: 444 LTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
LT +KP+W+EIP SW+PPSRLGHSL+VYG K+LMFGGLAKSG LRLRS + YTIDL +E
Sbjct: 121 LTMEKPIWKEIPVSWTPPSRLGHSLTVYGGRKILMFGGLAKSGPLRLRSSDVYTIDLSEE 180
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP 563
EP+W+ L + G G+ PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL+LLDP
Sbjct: 181 EPKWRYLTGSGMPGAGNPGGKAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYLLDP 240
Query: 564 SEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDS 623
+EEKP+WRILNVPGQ P+FAWGHSTCVVGGTR LVLGGHTGEEW+LNELHEL LASK
Sbjct: 241 TEEKPTWRILNVPGQQPRFAWGHSTCVVGGTRALVLGGHTGEEWILNELHELSLASKHGL 300
Query: 624 D 624
D
Sbjct: 301 D 301
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
WR+ P + S G +LV+ GG + + DTF+L+L P W+ + V
Sbjct: 75 WREVAGSAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLDLTMEKPIWKEIPVS 134
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL----NDVFVLDLDAKQPTWIEVS------ 402
+PP R GH+L+ G +++FGG + G L +DV+ +DL ++P W ++
Sbjct: 135 WTPPSRLGHSLTVYGGRKILMFGGLAKSGPLRLRSSDVYTIDLSEEEPKWRYLTGSGMPG 194
Query: 403 ----GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWR--EIPT 456
GG P PR H + + G ++++ GG S YLLD T +KP WR +P
Sbjct: 195 AGNPGGKAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPG 254
Query: 457 SWSPPSRLGHSLSVYGRTKVLMFGG 481
P GHS V G T+ L+ GG
Sbjct: 255 Q-QPRFAWGHSTCVVGGTRALVLGG 278
>gi|410716266|gb|AFV78509.1| zeitlupe, partial [Pinus sylvestris]
gi|410716268|gb|AFV78510.1| zeitlupe, partial [Pinus sylvestris]
gi|410716270|gb|AFV78511.1| zeitlupe, partial [Pinus sylvestris]
gi|410716272|gb|AFV78512.1| zeitlupe, partial [Pinus sylvestris]
gi|410716274|gb|AFV78513.1| zeitlupe, partial [Pinus sylvestris]
gi|410716276|gb|AFV78514.1| zeitlupe, partial [Pinus sylvestris]
gi|410716278|gb|AFV78515.1| zeitlupe, partial [Pinus sylvestris]
gi|410716280|gb|AFV78516.1| zeitlupe, partial [Pinus sylvestris]
gi|410716284|gb|AFV78518.1| zeitlupe, partial [Pinus sylvestris]
gi|410716286|gb|AFV78519.1| zeitlupe, partial [Pinus sylvestris]
gi|410716288|gb|AFV78520.1| zeitlupe, partial [Pinus sylvestris]
gi|410716290|gb|AFV78521.1| zeitlupe, partial [Pinus sylvestris]
gi|410716292|gb|AFV78522.1| zeitlupe, partial [Pinus sylvestris]
gi|410716294|gb|AFV78523.1| zeitlupe, partial [Pinus sylvestris]
gi|410716296|gb|AFV78524.1| zeitlupe, partial [Pinus sylvestris]
gi|410716298|gb|AFV78525.1| zeitlupe, partial [Pinus sylvestris]
gi|410716300|gb|AFV78526.1| zeitlupe, partial [Pinus sylvestris]
gi|410716302|gb|AFV78527.1| zeitlupe, partial [Pinus sylvestris]
gi|410716304|gb|AFV78528.1| zeitlupe, partial [Pinus sylvestris]
gi|410716306|gb|AFV78529.1| zeitlupe, partial [Pinus sylvestris]
gi|410716308|gb|AFV78530.1| zeitlupe, partial [Pinus sylvestris]
gi|410716310|gb|AFV78531.1| zeitlupe, partial [Pinus sylvestris]
gi|410716312|gb|AFV78532.1| zeitlupe, partial [Pinus sylvestris]
gi|410716314|gb|AFV78533.1| zeitlupe, partial [Pinus sylvestris]
gi|410716316|gb|AFV78534.1| zeitlupe, partial [Pinus sylvestris]
gi|410716318|gb|AFV78535.1| zeitlupe, partial [Pinus sylvestris]
gi|410716320|gb|AFV78536.1| zeitlupe, partial [Pinus sylvestris]
gi|410716322|gb|AFV78537.1| zeitlupe, partial [Pinus sylvestris]
gi|410716324|gb|AFV78538.1| zeitlupe, partial [Pinus sylvestris]
gi|410716326|gb|AFV78539.1| zeitlupe, partial [Pinus sylvestris]
gi|410716328|gb|AFV78540.1| zeitlupe, partial [Pinus sylvestris]
gi|410716330|gb|AFV78541.1| zeitlupe, partial [Pinus sylvestris]
gi|410716332|gb|AFV78542.1| zeitlupe, partial [Pinus sylvestris]
gi|410716334|gb|AFV78543.1| zeitlupe, partial [Pinus sylvestris]
gi|410716336|gb|AFV78544.1| zeitlupe, partial [Pinus sylvestris]
gi|410716338|gb|AFV78545.1| zeitlupe, partial [Pinus sylvestris]
gi|410716340|gb|AFV78546.1| zeitlupe, partial [Pinus sylvestris]
gi|410716342|gb|AFV78547.1| zeitlupe, partial [Pinus sylvestris]
gi|410716344|gb|AFV78548.1| zeitlupe, partial [Pinus sylvestris]
gi|410716346|gb|AFV78549.1| zeitlupe, partial [Pinus sylvestris]
gi|410716348|gb|AFV78550.1| zeitlupe, partial [Pinus sylvestris]
gi|410716350|gb|AFV78551.1| zeitlupe, partial [Pinus sylvestris]
gi|410716352|gb|AFV78552.1| zeitlupe, partial [Pinus sylvestris]
gi|410716354|gb|AFV78553.1| zeitlupe, partial [Pinus sylvestris]
gi|410716356|gb|AFV78554.1| zeitlupe, partial [Pinus sylvestris]
gi|410716358|gb|AFV78555.1| zeitlupe, partial [Pinus sylvestris]
gi|410716360|gb|AFV78556.1| zeitlupe, partial [Pinus sylvestris]
gi|410716362|gb|AFV78557.1| zeitlupe, partial [Pinus sylvestris]
gi|410716364|gb|AFV78558.1| zeitlupe, partial [Pinus sylvestris]
gi|410716366|gb|AFV78559.1| zeitlupe, partial [Pinus sylvestris]
gi|410716368|gb|AFV78560.1| zeitlupe, partial [Pinus sylvestris]
gi|410716370|gb|AFV78561.1| zeitlupe, partial [Pinus sylvestris]
gi|410716372|gb|AFV78562.1| zeitlupe, partial [Pinus sylvestris]
gi|410716374|gb|AFV78563.1| zeitlupe, partial [Pinus sylvestris]
gi|410716376|gb|AFV78564.1| zeitlupe, partial [Pinus sylvestris]
gi|410716378|gb|AFV78565.1| zeitlupe, partial [Pinus sylvestris]
gi|410716380|gb|AFV78566.1| zeitlupe, partial [Pinus sylvestris]
gi|410716382|gb|AFV78567.1| zeitlupe, partial [Pinus sylvestris]
gi|410716384|gb|AFV78568.1| zeitlupe, partial [Pinus sylvestris]
gi|410716386|gb|AFV78569.1| zeitlupe, partial [Pinus sylvestris]
gi|410716388|gb|AFV78570.1| zeitlupe, partial [Pinus sylvestris]
gi|410716390|gb|AFV78571.1| zeitlupe, partial [Pinus sylvestris]
gi|410716392|gb|AFV78572.1| zeitlupe, partial [Pinus sylvestris]
gi|410716394|gb|AFV78573.1| zeitlupe, partial [Pinus sylvestris]
gi|410716396|gb|AFV78574.1| zeitlupe, partial [Pinus sylvestris]
gi|410716398|gb|AFV78575.1| zeitlupe, partial [Pinus sylvestris]
gi|410716400|gb|AFV78576.1| zeitlupe, partial [Pinus sylvestris]
gi|410716402|gb|AFV78577.1| zeitlupe, partial [Pinus sylvestris]
gi|410716404|gb|AFV78578.1| zeitlupe, partial [Pinus sylvestris]
gi|410716406|gb|AFV78579.1| zeitlupe, partial [Pinus sylvestris]
gi|410716408|gb|AFV78580.1| zeitlupe, partial [Pinus sylvestris]
gi|410716412|gb|AFV78582.1| zeitlupe, partial [Pinus sylvestris]
gi|410716416|gb|AFV78584.1| zeitlupe, partial [Pinus sylvestris]
gi|410716418|gb|AFV78585.1| zeitlupe, partial [Pinus sylvestris]
gi|410716420|gb|AFV78586.1| zeitlupe, partial [Pinus sylvestris]
gi|410716422|gb|AFV78587.1| zeitlupe, partial [Pinus sylvestris]
gi|410716424|gb|AFV78588.1| zeitlupe, partial [Pinus sylvestris]
gi|410716426|gb|AFV78589.1| zeitlupe, partial [Pinus sylvestris]
gi|410716428|gb|AFV78590.1| zeitlupe, partial [Pinus sylvestris]
gi|410716430|gb|AFV78591.1| zeitlupe, partial [Pinus sylvestris]
gi|410716432|gb|AFV78592.1| zeitlupe, partial [Pinus sylvestris]
gi|410716434|gb|AFV78593.1| zeitlupe, partial [Pinus sylvestris]
gi|410716436|gb|AFV78594.1| zeitlupe, partial [Pinus sylvestris]
gi|410716438|gb|AFV78595.1| zeitlupe, partial [Pinus sylvestris]
gi|410716440|gb|AFV78596.1| zeitlupe, partial [Pinus sylvestris]
gi|410716442|gb|AFV78597.1| zeitlupe, partial [Pinus sylvestris]
gi|410716444|gb|AFV78598.1| zeitlupe, partial [Pinus sylvestris]
gi|410716446|gb|AFV78599.1| zeitlupe, partial [Pinus sylvestris]
gi|410716448|gb|AFV78600.1| zeitlupe, partial [Pinus sylvestris]
gi|410716450|gb|AFV78601.1| zeitlupe, partial [Pinus sylvestris]
gi|410716452|gb|AFV78602.1| zeitlupe, partial [Pinus sylvestris]
gi|410716454|gb|AFV78603.1| zeitlupe, partial [Pinus sylvestris]
gi|410716456|gb|AFV78604.1| zeitlupe, partial [Pinus sylvestris]
gi|410716458|gb|AFV78605.1| zeitlupe, partial [Pinus sylvestris]
gi|410716460|gb|AFV78606.1| zeitlupe, partial [Pinus sylvestris]
gi|410716462|gb|AFV78607.1| zeitlupe, partial [Pinus sylvestris]
gi|410716464|gb|AFV78608.1| zeitlupe, partial [Pinus sylvestris]
gi|410716466|gb|AFV78609.1| zeitlupe, partial [Pinus sylvestris]
gi|410716468|gb|AFV78610.1| zeitlupe, partial [Pinus sylvestris]
gi|410716470|gb|AFV78611.1| zeitlupe, partial [Pinus sylvestris]
gi|410716472|gb|AFV78612.1| zeitlupe, partial [Pinus sylvestris]
gi|410716474|gb|AFV78613.1| zeitlupe, partial [Pinus sylvestris]
gi|410716476|gb|AFV78614.1| zeitlupe, partial [Pinus sylvestris]
gi|410716478|gb|AFV78615.1| zeitlupe, partial [Pinus sylvestris]
gi|410716480|gb|AFV78616.1| zeitlupe, partial [Pinus sylvestris]
gi|410716482|gb|AFV78617.1| zeitlupe, partial [Pinus sylvestris]
gi|410716486|gb|AFV78619.1| zeitlupe, partial [Pinus sylvestris]
gi|410716488|gb|AFV78620.1| zeitlupe, partial [Pinus sylvestris]
gi|410716490|gb|AFV78621.1| zeitlupe, partial [Pinus sylvestris]
gi|410716492|gb|AFV78622.1| zeitlupe, partial [Pinus sylvestris]
gi|410716494|gb|AFV78623.1| zeitlupe, partial [Pinus sylvestris]
gi|410716496|gb|AFV78624.1| zeitlupe, partial [Pinus sylvestris]
gi|410716498|gb|AFV78625.1| zeitlupe, partial [Pinus sylvestris]
gi|410716500|gb|AFV78626.1| zeitlupe, partial [Pinus sylvestris]
gi|410716502|gb|AFV78627.1| zeitlupe, partial [Pinus sylvestris]
gi|410718342|gb|AFV79547.1| zeitlupe, partial [Pinus pinaster]
Length = 302
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/299 (77%), Positives = 263/299 (87%)
Query: 323 GEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGL 382
GEGVNMQPM+DTFVL+L AANPEWR V V S PPGRWGHTLS LNGSWLVVFGGCGRQGL
Sbjct: 1 GEGVNMQPMNDTFVLDLSAANPEWRHVKVSSPPPGRWGHTLSCLNGSWLVVFGGCGRQGL 60
Query: 383 LNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLL 442
LNDVF+LDLDA+QPTW EVSG APPLPRSWHSSC ++G+KLVVSGGC D+GVLLSDT+LL
Sbjct: 61 LNDVFILDLDAQQPTWREVSGSAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLL 120
Query: 443 DLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD 502
DLT +KP+W+EIP SW+PPSRLGHSL+VYG K+LMFGGLAKSG LRLRS + YTIDL +
Sbjct: 121 DLTMEKPIWKEIPVSWTPPSRLGHSLTVYGGRKILMFGGLAKSGPLRLRSSDVYTIDLSE 180
Query: 503 EEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD 562
EEP+W+ L + G G+ PPPRLDHVAVS+P GR++IFGGS+AGLHS SQL+LLD
Sbjct: 181 EEPKWRYLTGSGMPGAGNPGGKAPPPRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLD 240
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
P+EEKP+WR+LNVPGQ P+FAWGHSTCVVGGTR LVLGGHTGEEW+LNELHEL LASK
Sbjct: 241 PTEEKPTWRMLNVPGQQPRFAWGHSTCVVGGTRALVLGGHTGEEWILNELHELSLASKH 299
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
WR+ + P + S G +LV+ GG + + DTF+L+L P W+ + V
Sbjct: 76 WREVSGSAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLDLTMEKPIWKEIPVS 135
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL----NDVFVLDLDAKQPTWIEVS------ 402
+PP R GH+L+ G +++FGG + G L +DV+ +DL ++P W ++
Sbjct: 136 WTPPSRLGHSLTVYGGRKILMFGGLAKSGPLRLRSSDVYTIDLSEEEPKWRYLTGSGMPG 195
Query: 403 ----GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSW 458
GG P PR H + + G ++++ GG S YLLD T +KP WR +
Sbjct: 196 AGNPGGKAPPPRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWRMLNVPG 255
Query: 459 SPPS-RLGHSLSVYGRTKVLMFGG 481
P GHS V G T+ L+ GG
Sbjct: 256 QQPRFAWGHSTCVVGGTRALVLGG 279
>gi|293338341|gb|ADE43411.1| putative ZTL [Picea likiangensis]
Length = 301
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/301 (77%), Positives = 264/301 (87%)
Query: 324 EGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL 383
EGVNMQPM+DTFVL+L AANPEWR V+V S PPGRWGHTLS LNGSWLVVFGGCGRQGLL
Sbjct: 1 EGVNMQPMNDTFVLDLSAANPEWRHVNVSSPPPGRWGHTLSCLNGSWLVVFGGCGRQGLL 60
Query: 384 NDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLD 443
NDVF+LDLDA+QPTW EV+G APPLPRSWHSSC ++G+KLVVSGGC D+GVLLSDT+LLD
Sbjct: 61 NDVFILDLDAQQPTWREVAGSAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLD 120
Query: 444 LTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
LT +KP+W+EIP SW+PPSRLGHSL+VYG K+LMFGGLAKSG LRLRS + YTIDL +E
Sbjct: 121 LTMEKPIWKEIPVSWTPPSRLGHSLTVYGGRKILMFGGLAKSGPLRLRSSDVYTIDLSEE 180
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP 563
EP+W+ L + G G+ PPPRLDHVAVS+P GR++IFGGS+AGLHS SQL+LLDP
Sbjct: 181 EPKWRYLTGSGMPGAGNPGGKAPPPRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDP 240
Query: 564 SEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDS 623
+EEKP+WRILNVPGQ P+FAWGHSTCVVGGTR LVLGGHTGEEW+LNELHEL LASK
Sbjct: 241 TEEKPTWRILNVPGQQPRFAWGHSTCVVGGTRTLVLGGHTGEEWILNELHELSLASKHGL 300
Query: 624 D 624
D
Sbjct: 301 D 301
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
WR+ P + S G +LV+ GG + + DTF+L+L P W+ + V
Sbjct: 75 WREVAGSAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLDLTMEKPIWKEIPVS 134
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL----NDVFVLDLDAKQPTWIEVS------ 402
+PP R GH+L+ G +++FGG + G L +DV+ +DL ++P W ++
Sbjct: 135 WTPPSRLGHSLTVYGGRKILMFGGLAKSGPLRLRSSDVYTIDLSEEEPKWRYLTGSGMPG 194
Query: 403 ----GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWR--EIPT 456
GG P PR H + + G ++++ GG S YLLD T +KP WR +P
Sbjct: 195 AGNPGGKAPPPRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPG 254
Query: 457 SWSPPSRLGHSLSVYGRTKVLMFGG 481
P GHS V G T+ L+ GG
Sbjct: 255 Q-QPRFAWGHSTCVVGGTRTLVLGG 278
>gi|293338327|gb|ADE43404.1| putative ZTL [Picea likiangensis]
gi|293338329|gb|ADE43405.1| putative ZTL [Picea likiangensis]
gi|293338331|gb|ADE43406.1| putative ZTL [Picea likiangensis]
gi|293338333|gb|ADE43407.1| putative ZTL [Picea likiangensis]
gi|293338335|gb|ADE43408.1| putative ZTL [Picea likiangensis]
gi|293338337|gb|ADE43409.1| putative ZTL [Picea likiangensis]
gi|293338339|gb|ADE43410.1| putative ZTL [Picea likiangensis]
gi|293338343|gb|ADE43412.1| putative ZTL [Picea likiangensis]
gi|293338347|gb|ADE43414.1| putative ZTL [Picea likiangensis]
gi|293338349|gb|ADE43415.1| putative ZTL [Picea likiangensis]
gi|293338351|gb|ADE43416.1| putative ZTL [Picea likiangensis]
gi|293338353|gb|ADE43417.1| putative ZTL [Picea likiangensis]
gi|293338355|gb|ADE43418.1| putative ZTL [Picea likiangensis]
gi|293338357|gb|ADE43419.1| putative ZTL [Picea likiangensis]
gi|293338359|gb|ADE43420.1| putative ZTL [Picea likiangensis]
gi|293338361|gb|ADE43421.1| putative ZTL [Picea likiangensis]
gi|293338363|gb|ADE43422.1| putative ZTL [Picea likiangensis]
gi|293338367|gb|ADE43424.1| putative ZTL [Picea likiangensis]
gi|293338369|gb|ADE43425.1| putative ZTL [Picea likiangensis]
gi|293338371|gb|ADE43426.1| putative ZTL [Picea likiangensis]
gi|293338373|gb|ADE43427.1| putative ZTL [Picea likiangensis]
Length = 301
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/301 (77%), Positives = 264/301 (87%)
Query: 324 EGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL 383
EGVNMQPM+DTFVL+L AANPEWR V+V S PPGRWGHTLS LNGSWLVVFGGCGRQGLL
Sbjct: 1 EGVNMQPMNDTFVLDLSAANPEWRHVNVSSPPPGRWGHTLSCLNGSWLVVFGGCGRQGLL 60
Query: 384 NDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLD 443
NDVF+LDLDA+QPTW EV+G APPLPRSWHSSC ++G+KLVVSGGC D+GVLLSDT+LLD
Sbjct: 61 NDVFILDLDAQQPTWREVAGSAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLD 120
Query: 444 LTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
LT +KP+W+EIP SW+PPSRLGHSL+VYG K+LMFGGLAKSG LRLRS + YTIDL +E
Sbjct: 121 LTMEKPIWKEIPVSWTPPSRLGHSLTVYGGRKILMFGGLAKSGPLRLRSSDVYTIDLSEE 180
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP 563
EP+W+ L + G G+ PPPRLDHVAVS+P GR++IFGGS+AGLHS SQL+LLDP
Sbjct: 181 EPKWRYLTGSGMPGAGNPGGKAPPPRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDP 240
Query: 564 SEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDS 623
+EEKP+WRILNVPGQ P+FAWGHSTCVVGGTR LVLGGHTGEEW+LNELHEL LASK
Sbjct: 241 TEEKPTWRILNVPGQQPRFAWGHSTCVVGGTRALVLGGHTGEEWILNELHELSLASKHGL 300
Query: 624 D 624
D
Sbjct: 301 D 301
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
WR+ P + S G +LV+ GG + + DTF+L+L P W+ + V
Sbjct: 75 WREVAGSAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLDLTMEKPIWKEIPVS 134
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL----NDVFVLDLDAKQPTWIEVS------ 402
+PP R GH+L+ G +++FGG + G L +DV+ +DL ++P W ++
Sbjct: 135 WTPPSRLGHSLTVYGGRKILMFGGLAKSGPLRLRSSDVYTIDLSEEEPKWRYLTGSGMPG 194
Query: 403 ----GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWR--EIPT 456
GG P PR H + + G ++++ GG S YLLD T +KP WR +P
Sbjct: 195 AGNPGGKAPPPRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPG 254
Query: 457 SWSPPSRLGHSLSVYGRTKVLMFGG 481
P GHS V G T+ L+ GG
Sbjct: 255 Q-QPRFAWGHSTCVVGGTRALVLGG 278
>gi|410716282|gb|AFV78517.1| zeitlupe, partial [Pinus sylvestris]
gi|410716410|gb|AFV78581.1| zeitlupe, partial [Pinus sylvestris]
gi|410716414|gb|AFV78583.1| zeitlupe, partial [Pinus sylvestris]
Length = 302
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/299 (77%), Positives = 262/299 (87%)
Query: 323 GEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGL 382
GEGVNMQPM+DTFVL+L AANPEWR V V S PPGRWGHTLS LNGSWLVVFGGCGRQGL
Sbjct: 1 GEGVNMQPMNDTFVLDLSAANPEWRHVKVSSPPPGRWGHTLSCLNGSWLVVFGGCGRQGL 60
Query: 383 LNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLL 442
LNDVF+LDLDA+QPTW EVSG APPLPRSWHSSC ++G+KLVVSGGC D+GVLLSDT+LL
Sbjct: 61 LNDVFILDLDAQQPTWREVSGSAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLL 120
Query: 443 DLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD 502
DLT + P+W+EIP SW+PPSRLGHSL+VYG K+LMFGGLAKSG LRLRS + YTIDL +
Sbjct: 121 DLTMENPIWKEIPVSWTPPSRLGHSLTVYGGRKILMFGGLAKSGPLRLRSSDVYTIDLSE 180
Query: 503 EEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD 562
EEP+W+ L + G G+ PPPRLDHVAVS+P GR++IFGGS+AGLHS SQL+LLD
Sbjct: 181 EEPKWRYLTGSGMPGAGNPGGKAPPPRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLD 240
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
P+EEKP+WR+LNVPGQ P+FAWGHSTCVVGGTR LVLGGHTGEEW+LNELHEL LASK
Sbjct: 241 PTEEKPTWRMLNVPGQQPRFAWGHSTCVVGGTRALVLGGHTGEEWILNELHELSLASKH 299
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
WR+ + P + S G +LV+ GG + + DTF+L+L NP W+ + V
Sbjct: 76 WREVSGSAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLDLTMENPIWKEIPVS 135
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL----NDVFVLDLDAKQPTWIEVS------ 402
+PP R GH+L+ G +++FGG + G L +DV+ +DL ++P W ++
Sbjct: 136 WTPPSRLGHSLTVYGGRKILMFGGLAKSGPLRLRSSDVYTIDLSEEEPKWRYLTGSGMPG 195
Query: 403 ----GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSW 458
GG P PR H + + G ++++ GG S YLLD T +KP WR +
Sbjct: 196 AGNPGGKAPPPRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWRMLNVPG 255
Query: 459 SPPS-RLGHSLSVYGRTKVLMFGG 481
P GHS V G T+ L+ GG
Sbjct: 256 QQPRFAWGHSTCVVGGTRALVLGG 279
>gi|410716484|gb|AFV78618.1| zeitlupe, partial [Pinus sylvestris]
Length = 302
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/299 (77%), Positives = 262/299 (87%)
Query: 323 GEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGL 382
GEGVNMQPM+DTFVL+L AANPEWR V V S PPGRWGHTLS LNGSWLVVFGGCGRQGL
Sbjct: 1 GEGVNMQPMNDTFVLDLSAANPEWRHVKVSSPPPGRWGHTLSCLNGSWLVVFGGCGRQGL 60
Query: 383 LNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLL 442
LNDVF+LDLDA+QPTW EVSG APPLPRSWHSSC ++G+KLVVSGGC D+GVLLSDT+LL
Sbjct: 61 LNDVFILDLDAQQPTWREVSGSAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLL 120
Query: 443 DLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD 502
DLT +KP+W+EIP SW+PPSRLGHSL+VYG K+LMFGGLAKSG LRLRS + YT DL +
Sbjct: 121 DLTMEKPIWKEIPVSWTPPSRLGHSLTVYGGRKILMFGGLAKSGPLRLRSSDVYTNDLSE 180
Query: 503 EEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD 562
EEP+W+ L + G G+ PPPRLDHVAVS+P GR++IFGGS+AGLHS SQL+LLD
Sbjct: 181 EEPKWRYLTGSGMPGAGNPGGKAPPPRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLD 240
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
P+EEKP+WR+LNVPGQ P+FAWGHSTCVVGGTR LVLGGHTGEEW+LNELHEL LASK
Sbjct: 241 PTEEKPTWRMLNVPGQQPRFAWGHSTCVVGGTRALVLGGHTGEEWILNELHELSLASKH 299
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
WR+ + P + S G +LV+ GG + + DTF+L+L P W+ + V
Sbjct: 76 WREVSGSAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLDLTMEKPIWKEIPVS 135
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL----NDVFVLDLDAKQPTWIEVS------ 402
+PP R GH+L+ G +++FGG + G L +DV+ DL ++P W ++
Sbjct: 136 WTPPSRLGHSLTVYGGRKILMFGGLAKSGPLRLRSSDVYTNDLSEEEPKWRYLTGSGMPG 195
Query: 403 ----GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSW 458
GG P PR H + + G ++++ GG S YLLD T +KP WR +
Sbjct: 196 AGNPGGKAPPPRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWRMLNVPG 255
Query: 459 SPPS-RLGHSLSVYGRTKVLMFGG 481
P GHS V G T+ L+ GG
Sbjct: 256 QQPRFAWGHSTCVVGGTRALVLGG 279
>gi|293338365|gb|ADE43423.1| putative ZTL [Picea likiangensis]
Length = 301
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/301 (76%), Positives = 261/301 (86%)
Query: 324 EGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL 383
EGVNMQP +DTFVL+L AANPEWR V+V S PPGRWGHTLS LNGSWLVVFGGCGRQGLL
Sbjct: 1 EGVNMQPXNDTFVLDLSAANPEWRHVNVSSPPPGRWGHTLSCLNGSWLVVFGGCGRQGLL 60
Query: 384 NDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLD 443
NDVF+LDLDA+QPTW EV+G APPLPRSWHSSC ++G+KLVVSGGC D+GVLLSDT+LLD
Sbjct: 61 NDVFILDLDAQQPTWREVAGSAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLD 120
Query: 444 LTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
LT +KP+W+EIP SW+PPSRLGHSL+VYG K+LMFGGLAKSG LRLRS + YTID +E
Sbjct: 121 LTMEKPIWKEIPVSWTPPSRLGHSLTVYGGRKILMFGGLAKSGPLRLRSSDVYTIDXSEE 180
Query: 504 EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP 563
EP+W+ L + G G+ PPPRLDHVAVS+P GR++IFGGS+AGLHS SQL+LLDP
Sbjct: 181 EPKWRYLTGSGMPGAGNPGGKAPPPRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDP 240
Query: 564 SEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDS 623
EEKP+WRILNVPGQ P+FAWGHSTCVVGGTR LVLGGHTGEEW+LNELHEL LASK
Sbjct: 241 XEEKPTWRILNVPGQQPRFAWGHSTCVVGGTRALVLGGHTGEEWILNELHELSLASKHGL 300
Query: 624 D 624
D
Sbjct: 301 D 301
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
WR+ P + S G +LV+ GG + + DTF+L+L P W+ + V
Sbjct: 75 WREVAGSAPPLPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTFLLDLTMEKPIWKEIPVS 134
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL----NDVFVLDLDAKQPTWIEVS------ 402
+PP R GH+L+ G +++FGG + G L +DV+ +D ++P W ++
Sbjct: 135 WTPPSRLGHSLTVYGGRKILMFGGLAKSGPLRLRSSDVYTIDXSEEEPKWRYLTGSGMPG 194
Query: 403 ----GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWR--EIPT 456
GG P PR H + + G ++++ GG S YLLD +KP WR +P
Sbjct: 195 AGNPGGKAPPPRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDPXEEKPTWRILNVPG 254
Query: 457 SWSPPSRLGHSLSVYGRTKVLMFGG 481
P GHS V G T+ L+ GG
Sbjct: 255 Q-QPRFAWGHSTCVVGGTRALVLGG 278
>gi|297735411|emb|CBI17851.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 165/246 (67%), Positives = 204/246 (82%), Gaps = 8/246 (3%)
Query: 383 LNDVFVLDLDA--------KQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGV 434
+ND FVLDL++ + P W E+SG APPLPRSWHSSC ++G+KL+VSGGC D+GV
Sbjct: 1 MNDTFVLDLNSSNPEWQHVQPPAWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGV 60
Query: 435 LLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGE 494
LLSDT+LLDL+ +KP+WREIP +WSPPSRLGH+LSVYG K+LMFGGLAKSG LR RS +
Sbjct: 61 LLSDTFLLDLSMEKPIWREIPVAWSPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSD 120
Query: 495 SYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHS 554
YT+DL ++ P W+ + + G G+ + + PPPRLDHVAVS+P GRI+IFGGS+AGLHS
Sbjct: 121 VYTMDLSEDNPCWRCVTGSGMPGAGNPAGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHS 180
Query: 555 PSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHE 614
SQL+LLDP++EKP+WRILNVPG+PP+FAWGHSTCVVGGTR +VLGG TGEEW+L+ELHE
Sbjct: 181 ASQLYLLDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHE 240
Query: 615 LCLASK 620
L LAS
Sbjct: 241 LSLASS 246
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 105/203 (51%), Gaps = 25/203 (12%)
Query: 331 MDDTFVLNLDAANPEW--------RRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG- 381
M+DTFVL+L+++NPEW R +S + P R H+ +L+G+ L+V GGC G
Sbjct: 1 MNDTFVLDLNSSNPEWQHVQPPAWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGV 60
Query: 382 LLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLL---SD 438
LL+D F+LDL ++P W E+ P R H+ + G K+++ GG +G L SD
Sbjct: 61 LLSDTFLLDLSMEKPIWREIPVAWSPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSD 120
Query: 439 TYLLDLTTDKPMWREI----------PTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHL 488
Y +DL+ D P WR + P +PP RL H ++L+FGG H
Sbjct: 121 VYTMDLSEDNPCWRCVTGSGMPGAGNPAGIAPPPRLDHVAVSLPGGRILIFGGSVAGLH- 179
Query: 489 RLRSGESYTIDLGDEEPQWKQLE 511
+ + Y +D DE+P W+ L
Sbjct: 180 --SASQLYLLDPTDEKPTWRILN 200
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 101/213 (47%), Gaps = 15/213 (7%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
E ++ WR+ + P + S G +L++ GG + + DTF+L+L
Sbjct: 15 EWQHVQPPAWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEK 74
Query: 344 PEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL----NDVFVLDLDAKQPTWI 399
P WR + V SPP R GHTLS G +++FGG + G L +DV+ +DL P W
Sbjct: 75 PIWREIPVAWSPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVYTMDLSEDNPCWR 134
Query: 400 EVSG----------GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKP 449
V+G G P PR H + + G ++++ GG S YLLD T +KP
Sbjct: 135 CVTGSGMPGAGNPAGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYLLDPTDEKP 194
Query: 450 MWREIPTSWSPPS-RLGHSLSVYGRTKVLMFGG 481
WR + PP GHS V G T+ ++ GG
Sbjct: 195 TWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGG 227
>gi|28193646|gb|AAO27296.1| F-box protein ZEITLUPE [Brassica rapa subsp. pekinensis]
Length = 157
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/156 (73%), Positives = 137/156 (87%)
Query: 344 PEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
PEW+ V V S PPGRWGHTL+ +NGS LVVFGGCG+QGLLNDVFVL+LDAK PTW E+SG
Sbjct: 2 PEWQHVKVSSPPPGRWGHTLTCVNGSNLVVFGGCGQQGLLNDVFVLNLDAKPPTWREISG 61
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSR 463
APPLPRSWHSSC ++G+KL+VSGGC D+GVLLSDT+LLDL+ +KP+WREIP +W+PPSR
Sbjct: 62 LAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSIEKPVWREIPAAWTPPSR 121
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTID 499
LGH+LSVYG K+LMFGGLAKSG L+ RS + +T+D
Sbjct: 122 LGHTLSVYGGRKILMFGGLAKSGPLKFRSSDVFTMD 157
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 311 ACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSW 370
C G+ LV+FGG G ++D FVLNLDA P WR +S + P R H+ +L+G+
Sbjct: 22 TCVNGSNLVVFGGCG-QQGLLNDVFVLNLDAKPPTWREISGLAPPLPRSWHSSCTLDGTK 80
Query: 371 LVVFGGCGRQG-LLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGC 429
L+V GGC G LL+D F+LDL ++P W E+ P R H+ + G K+++ GG
Sbjct: 81 LIVSGGCADSGVLLSDTFLLDLSIEKPVWREIPAAWTPPSRLGHTLSVYGGRKILMFGGL 140
Query: 430 TDAGVLL---SDTYLLD 443
+G L SD + +D
Sbjct: 141 AKSGPLKFRSSDVFTMD 157
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 449 PMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWK 508
P W+ + S PP R GH+L+ + +++FGG + G L + + ++L + P W+
Sbjct: 2 PEWQHVKVSSPPPGRWGHTLTCVNGSNLVVFGGCGQQGLLN----DVFVLNLDAKPPTWR 57
Query: 509 QLECNAFTGVGSQSAVVPP-PRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEK 567
++ S + PP PR H + ++ ++I+ GG S FLLD S EK
Sbjct: 58 EI-----------SGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSIEK 106
Query: 568 PSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 601
P WR + PP GH+ V GG ++L+ GG
Sbjct: 107 PVWREIPAAWTPPSRL-GHTLSVYGGRKILMFGG 139
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
WR+ + P + S G +L++ GG + + DTF+L+L P WR +
Sbjct: 56 WREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSIEKPVWREIPAA 115
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL----NDVFVLD 390
+PP R GHTLS G +++FGG + G L +DVF +D
Sbjct: 116 WTPPSRLGHTLSVYGGRKILMFGGLAKSGPLKFRSSDVFTMD 157
>gi|413926587|gb|AFW66519.1| hypothetical protein ZEAMMB73_803901 [Zea mays]
Length = 108
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 88/104 (84%)
Query: 517 GVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVP 576
G G+ + V P PRLDHVAVS+P GR++IFGGS+AGLHS S+L+LLDP+EEK +WR+LN P
Sbjct: 3 GAGNPAGVGPLPRLDHVAVSLPGGRVLIFGGSVAGLHSASKLYLLDPTEEKLTWRLLNAP 62
Query: 577 GQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
G PP+FAWGHSTCVVGGT+ +V+GG TGEEW L E+HEL LAS
Sbjct: 63 GHPPRFAWGHSTCVVGGTKAIVIGGGTGEEWTLTEIHELSLASS 106
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS- 462
G PLPR H + + G ++++ GG S YLLD T +K WR + PP
Sbjct: 9 GVGPLPRLDHVAVSLPGGRVLIFGGSVAGLHSASKLYLLDPTEEKLTWRLLNAPGHPPRF 68
Query: 463 RLGHSLSVYGRTKVLMFGG 481
GHS V G TK ++ GG
Sbjct: 69 AWGHSTCVVGGTKAIVIGG 87
>gi|361070003|gb|AEW09313.1| Pinus taeda anonymous locus UMN_3410_01 genomic sequence
gi|383153838|gb|AFG59048.1| Pinus taeda anonymous locus UMN_3410_01 genomic sequence
Length = 85
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/84 (86%), Positives = 75/84 (89%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
WRK TV GAVEPSRCNFSACA GNRLVLFGGEGVNMQPM+DTFVL+L AANPEWR V V
Sbjct: 2 WRKLTVGGAVEPSRCNFSACAVGNRLVLFGGEGVNMQPMNDTFVLDLSAANPEWRHVKVS 61
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGG 376
S PPGRWGHTLS LNGSWLVVFGG
Sbjct: 62 SPPPGRWGHTLSCLNGSWLVVFGG 85
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS 462
GGA R S+C + G++LV+ GG ++DT++LDL+ P WR + S PP
Sbjct: 8 GGAVEPSRCNFSACAV-GNRLVLFGGEGVNMQPMNDTFVLDLSAANPEWRHVKVSSPPPG 66
Query: 463 RLGHSLSVYGRTKVLMFGG 481
R GH+LS + +++FGG
Sbjct: 67 RWGHTLSCLNGSWLVVFGG 85
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 346 WRRVSVKSS-PPGRWGHTLSSLNGSWLVVFGGCG-RQGLLNDVFVLDLDAKQPTWIEVSG 403
WR+++V + P R + ++ G+ LV+FGG G +ND FVLDL A P W V
Sbjct: 2 WRKLTVGGAVEPSRCNFSACAV-GNRLVLFGGEGVNMQPMNDTFVLDLSAANPEWRHVKV 60
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGG 428
+PP R H+ + GS LVV GG
Sbjct: 61 SSPPPGRWGHTLSCLNGSWLVVFGG 85
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 584
V P R + A ++ R+++FGG + + F+LD S P WR + V PP W
Sbjct: 11 VEPSRCNFSACAVG-NRLVLFGGEGVNMQPMNDTFVLDLSAANPEWRHVKVSSPPPG-RW 68
Query: 585 GHSTCVVGGTRVLVLGG 601
GH+ + G+ ++V GG
Sbjct: 69 GHTLSCLNGSWLVVFGG 85
>gi|168028820|ref|XP_001766925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681904|gb|EDQ68327.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 463
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 205/446 (45%), Gaps = 54/446 (12%)
Query: 199 GHSPLSQHQDICGILQLS-DEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVC 257
GH+P CG+ LS D+++A IL L + + + G C+R R++ ++++ +C
Sbjct: 9 GHNPAPAG---CGLASLSLDQLVA--ILQFLPVQSLIAFGLTCKRFREIADSDNLWAYIC 63
Query: 258 QNAWGREVTGALELMTK-KLGWGRLARELTTLEAVCWRKFTVRGAVEPS-RCNFSACAAG 315
WGR K + GW + R++ L+A WRK +G V P+ R + S
Sbjct: 64 VREWGRRAVQTWPNHGKERGGWKMVYRQMLMLKAGSWRKVE-QGDVGPAPRASHSLYTVA 122
Query: 316 NRLVLFGGEGVNMQPMDDTFVLNLDAANPE---WRRVSVKSSPPGRWGHTLSSLNGSWLV 372
+ L ++GG + +DDT+V +L E W R++ SPPGR+G + + +N S +V
Sbjct: 123 DNLSVYGGGCQGGRHLDDTWVASLPTEISEGIVWHRIN-NGSPPGRFGQSCTVVNDS-IV 180
Query: 373 VFGGCGRQGL------LNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVS 426
+FGG QG+ +N + P W V P PR H+ C ++V+
Sbjct: 181 IFGGINDQGVRHCDTWINRGLGSGNLYESPAWELVDVVTSPPPRGAHAGCCGGDRRVVIF 240
Query: 427 GGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSG 486
GG G DT++LDL+ P W ++ TS SPP+R GH+++ G K+++FGG
Sbjct: 241 GGIGTEGNRFGDTWVLDLSESPPTWHDVITSASPPARSGHTMTWIGGRKMILFGGRG--- 297
Query: 487 HLRLRS-GESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIF 545
+R + + +D+ PQW +L + + P PR H A + RI+IF
Sbjct: 298 -IRFEVLNDVWLLDMEGAYPQWVELRPRELQPLHDR----PAPRAGHSATLIFGERILIF 352
Query: 546 GGSIAGLHSPSQLFLLDP---------------------SEEKPS---WRILNVPGQPPK 581
GG A ++LDP SE+K + W+ L GQ P
Sbjct: 353 GGEDARRSRKGDAWVLDPKAGVQVGCGSSCMPSYPQKPFSEDKLAPRFWKKLKQLGQLPS 412
Query: 582 FAWGHSTCVVG-GTRVLVLGGHTGEE 606
H C +G G +LV GG E
Sbjct: 413 RRSFHGACALGSGHSILVFGGMVDGE 438
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 127/301 (42%), Gaps = 39/301 (12%)
Query: 318 LVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGC 377
L+ FG + + D+ L EW R +V++ P G W +V+
Sbjct: 39 LIAFGLTCKRFREIADSDNLWAYICVREWGRRAVQTWP------NHGKERGGWKMVY--- 89
Query: 378 GRQGLLNDVFVLDLDAKQPTWIEV-SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLL 436
RQ L+ K +W +V G P PR+ HS + + V GGC G L
Sbjct: 90 -RQMLM---------LKAGSWRKVEQGDVGPAPRASHSLYTVADNLSVYGGGC-QGGRHL 138
Query: 437 SDTYLLDLTTDKP---MWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSG 493
DT++ L T+ +W I SPP R G S +V + +++FGG+ G +
Sbjct: 139 DDTWVASLPTEISEGIVWHRINNG-SPPGRFGQSCTVVNDS-IVIFGGINDQGVRHCDTW 196
Query: 494 ESYTIDLGD--EEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAG 551
+ + G+ E P W+ ++ PPPR H R++IFGG
Sbjct: 197 INRGLGSGNLYESPAWELVDV----------VTSPPPRGAHAGCCGGDRRVVIFGGIGTE 246
Query: 552 LHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNE 611
+ ++LD SE P+W + PP + GH+ +GG ++++ GG VLN+
Sbjct: 247 GNRFGDTWVLDLSESPPTWHDVITSASPPARS-GHTMTWIGGRKMILFGGRGIRFEVLND 305
Query: 612 L 612
+
Sbjct: 306 V 306
>gi|242080973|ref|XP_002445255.1| hypothetical protein SORBIDRAFT_07g006910 [Sorghum bicolor]
gi|241941605|gb|EES14750.1| hypothetical protein SORBIDRAFT_07g006910 [Sorghum bicolor]
Length = 476
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 209/443 (47%), Gaps = 56/443 (12%)
Query: 212 ILQLS-DEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGAL- 269
I QL D+VL +IL L P V S + CR R + + + +C+ WG T AL
Sbjct: 32 IAQLGYDQVL--SILRLLPPEAVLSFAATCRAFRAWASTDALWEALCRRDWGARATAALA 89
Query: 270 ELMTKKLG------WGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGG 323
E + G W R+ E+ L A+ R+ VRGA R + S LVLFGG
Sbjct: 90 ERRHDRHGGGLQAPWRRVYAEVARLGALSARRVPVRGASPRPRASHSLNLVAGWLVLFGG 149
Query: 324 EGVNMQPMDDTFVL-------NLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGG 376
+DDT+V N A W++++ +P GR+ H+ +L G LV+FGG
Sbjct: 150 GCEGGHHLDDTWVAYAGTGAGNRPPAILSWQQLA-SGTPGGRFSHS-CTLVGDTLVLFGG 207
Query: 377 CGRQG-LLNDVFVLDLDAKQP-----TW--IEVSGGAPPLPRSWHSSCIIEGSKLVVSGG 428
QG LND ++ + +++ +W +EV APP PR H++C ++ +V+ GG
Sbjct: 208 ITDQGQRLNDTWIGQIFSEEHRRMRISWRLLEVGPLAPP-PRGAHAACCVDEKFIVIHGG 266
Query: 429 CTDAGVLLSDTYLLDLTT--DKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKS 485
G L DT+LLDL+ W ++ +W PP R GHSL+ G T++++FGG
Sbjct: 267 VGLYGSRLGDTWLLDLSNGFQSASWHQVGNTWPLPPPRSGHSLTWIGGTRMVLFGGRGSE 326
Query: 486 GHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIF 545
+ + + D+ D+ P+WK+L+ + + +G +P PR+ H A+ G+++++
Sbjct: 327 FEVL---NDVWLFDISDQYPKWKELKYDLSSALGE----LPFPRVGHSAILALGGKVLVY 379
Query: 546 GGSIAGLHSPSQLFLLDP-----------SEEKPSWRILNVPGQPPKFAWGHSTCV-VGG 593
GG + + ++LD K W+ L + GQ P + H CV G
Sbjct: 380 GGEDSQMRRKDDFWILDTPALLQYESGSKKMTKKMWKKLRIDGQCPNYRSFHGACVDTSG 439
Query: 594 TRVLVLGG------HTGEEWVLN 610
V + GG H E W L
Sbjct: 440 CCVYIFGGMVDGLVHPAEAWGLR 462
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 37/227 (16%)
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT---DKP----MWREIPT 456
GA P PR+ HS ++ G ++ GGC + G L DT++ T ++P W+++ +
Sbjct: 126 GASPRPRASHSLNLVAGWLVLFGGGC-EGGHHLDDTWVAYAGTGAGNRPPAILSWQQLAS 184
Query: 457 SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQ-----WKQLE 511
+P R HS ++ G T VL FGG+ G R +++ + EE + W+ LE
Sbjct: 185 G-TPGGRFSHSCTLVGDTLVL-FGGITDQGQ---RLNDTWIGQIFSEEHRRMRISWRLLE 239
Query: 512 CNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSP--SQLFLLDPSE--EK 567
+ PPPR H A + I+I GG GL+ +LLD S +
Sbjct: 240 VGP---------LAPPPRGAHAACCVDEKFIVIHGG--VGLYGSRLGDTWLLDLSNGFQS 288
Query: 568 PSWRIL--NVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEL 612
SW + P PP+ GHS +GGTR+++ GG E VLN++
Sbjct: 289 ASWHQVGNTWPLPPPRS--GHSLTWIGGTRMVLFGGRGSEFEVLNDV 333
>gi|38175442|dbj|BAD01248.1| putative F-box protein [Oryza sativa Japonica Group]
gi|38175700|dbj|BAD01409.1| putative F-box protein [Oryza sativa Japonica Group]
Length = 448
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 197/418 (47%), Gaps = 44/418 (10%)
Query: 217 DEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALE----LM 272
D+VL +IL L V S + CR ++ + + +C+ WG T AL
Sbjct: 13 DQVL--SILHLLPAESVLSFAAACRAFHAWASSDALWEALCRRDWGARATAALAERRRRG 70
Query: 273 TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMD 332
+ W R+ E+ L A+ R+ V+GA R + S LVLFGG + +D
Sbjct: 71 GGGVPWRRIYAEVALLGALSARRVPVKGASPRPRASHSLNLVAGWLVLFGGGCEGGRHLD 130
Query: 333 DTFVL-------NLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG-LLN 384
DT+V N +A W+++ +P GR+GH+ S+ G LV+FGG QG LN
Sbjct: 131 DTWVAYVGNGAGNRSSAVFSWQQLD-SGTPSGRFGHS-CSIVGDALVLFGGINDQGQRLN 188
Query: 385 DVFVLDLDAKQPTWIEVS------GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSD 438
D ++ + ++ +++S G P PR H++C ++ +V+ GG +G L D
Sbjct: 189 DTWIGQIICEESRRMKISWRLLEVGPHAPYPRGAHAACCVDDKFIVIHGGIGQSGSRLGD 248
Query: 439 TYLLDLTTD--KPMWREIP-TSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGES 495
T+LLDL+ +W +I T P SR GH+L+ G +++++FGG + +
Sbjct: 249 TWLLDLSNGLRSGIWHQIEDTEPLPLSRSGHTLTWIGGSRMVLFGGRGSEFDVL---NDV 305
Query: 496 YTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSP 555
+ +D+ + P+WK+L+ + + +G +P PR+ H A + G+I+++GG +
Sbjct: 306 WLLDINERYPKWKELKYDLSSVLGE----MPFPRVGHSATLVLGGKILVYGGEDSQRRRK 361
Query: 556 SQLFLLD-----------PSEEKPSWRILNVPGQPPKFAWGHSTCV-VGGTRVLVLGG 601
+ LD K W+ L + GQ P + H CV G V + GG
Sbjct: 362 DDFWTLDLPALLQFESGSKKMTKRMWKKLRIDGQCPNYRSFHGACVDTSGCHVYIFGG 419
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLL-------DLTTDKPMWREIPT 456
GA P PR+ HS ++ G ++ GGC + G L DT++ + ++ W+++ +
Sbjct: 98 GASPRPRASHSLNLVAGWLVLFGGGC-EGGRHLDDTWVAYVGNGAGNRSSAVFSWQQLDS 156
Query: 457 SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQ-----WKQLE 511
+P R GHS S+ G VL FGG+ G R +++ + EE + W+ LE
Sbjct: 157 G-TPSGRFGHSCSIVGDALVL-FGGINDQGQ---RLNDTWIGQIICEESRRMKISWRLLE 211
Query: 512 CNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPS-- 569
VG + P PR H A + I+I GG +LLD S S
Sbjct: 212 ------VGPHA---PYPRGAHAACCVDDKFIVIHGGIGQSGSRLGDTWLLDLSNGLRSGI 262
Query: 570 WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEL 612
W + P GH+ +GG+R+++ GG E VLN++
Sbjct: 263 WHQIEDTEPLPLSRSGHTLTWIGGSRMVLFGGRGSEFDVLNDV 305
>gi|413917126|gb|AFW57058.1| hypothetical protein ZEAMMB73_592868 [Zea mays]
Length = 468
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 198/427 (46%), Gaps = 49/427 (11%)
Query: 212 ILQLS-DEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALE 270
I+QL D+VL ++L L P V S + CR R ++ + + +C WG T AL
Sbjct: 25 IVQLGYDQVL--SVLRLLPPEAVLSFAATCRVFRAWASSDALWEALCCRDWGSRATAALA 82
Query: 271 LMTKKLG------WGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGE 324
+ G W R+ E+ L A+ R+ RGA R + S LVLFGG
Sbjct: 83 ERRRDRGGGLQAPWRRVYAEVARLGALSARRVPARGASPRPRASHSLNLVAGWLVLFGGG 142
Query: 325 GVNMQPMDDTFVLNLDAANPE-------WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGC 377
+DDT+V + W++++ +P GR+ H+ L G LV+FGG
Sbjct: 143 CEGGHHLDDTWVAYAGSGAGNRPPPILSWQQLA-SGTPGGRFSHS-CLLVGDTLVLFGGI 200
Query: 378 GRQG-LLNDVFVLDLDAKQP-----TW--IEVSGGAPPLPRSWHSSCIIEGSKLVVSGGC 429
QG LND + + ++P +W +EV APP PR H++C ++ +V+ GG
Sbjct: 201 TDQGQRLNDTWTGQIICEEPRRPRISWRLLEVGRLAPP-PRGAHAACCVDDKFIVIHGGI 259
Query: 430 TDAGVLLSDTYLLDLTT--DKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSG 486
G L DT+LLDL+ W +I +W P R GHSL+ G T +++FGG
Sbjct: 260 GLYGSRLGDTWLLDLSNGLQSGSWHQIGNTWPLPQPRSGHSLTWIGSTCMVLFGGRGSEF 319
Query: 487 HLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFG 546
+ + + D+ D+ P+WK+L+ G+ S +P PR+ H A+ + G+++++G
Sbjct: 320 EVL---NDVWLFDISDQYPKWKELK----YGLSSALGELPFPRVGHSAILVLGGKVLVYG 372
Query: 547 GSIAGLHSPSQLFLLD-----------PSEEKPSWRILNVPGQPPKFAWGHSTCV-VGGT 594
G + ++LD + W+ L + GQ P + H CV G
Sbjct: 373 GEDSQRRRKDDFWILDTPALLQYESGSKKMTRKMWKKLRIDGQCPNYRSFHGACVDASGC 432
Query: 595 RVLVLGG 601
V + GG
Sbjct: 433 CVYIFGG 439
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 33/225 (14%)
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT---DKP----MWREIPT 456
GA P PR+ HS ++ G ++ GGC + G L DT++ + ++P W+++ +
Sbjct: 118 GASPRPRASHSLNLVAGWLVLFGGGC-EGGHHLDDTWVAYAGSGAGNRPPPILSWQQLAS 176
Query: 457 SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQ-----WKQLE 511
+P R HS + G T VL FGG+ G R +++T + EEP+ W+ LE
Sbjct: 177 G-TPGGRFSHSCLLVGDTLVL-FGGITDQGQ---RLNDTWTGQIICEEPRRPRISWRLLE 231
Query: 512 CNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSP--SQLFLLDPSE--EK 567
+ PPPR H A + I+I GG GL+ +LLD S +
Sbjct: 232 VGR---------LAPPPRGAHAACCVDDKFIVIHGG--IGLYGSRLGDTWLLDLSNGLQS 280
Query: 568 PSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEL 612
SW + P+ GHS +G T +++ GG E VLN++
Sbjct: 281 GSWHQIGNTWPLPQPRSGHSLTWIGSTCMVLFGGRGSEFEVLNDV 325
>gi|10177276|dbj|BAB10629.1| unnamed protein product [Arabidopsis thaliana]
Length = 95
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 72/77 (93%)
Query: 548 SIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEW 607
S+ GLHSPS LFL+DPS+EKPSWRILNVPG+PPK AWGHSTCVVGGTRVLVLGGH GEEW
Sbjct: 18 SVEGLHSPSLLFLIDPSKEKPSWRILNVPGKPPKLAWGHSTCVVGGTRVLVLGGHNGEEW 77
Query: 608 VLNELHELCLASKQDSD 624
+LNELHELCLAS QDSD
Sbjct: 78 ILNELHELCLASWQDSD 94
>gi|218200712|gb|EEC83139.1| hypothetical protein OsI_28324 [Oryza sativa Indica Group]
Length = 448
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 198/418 (47%), Gaps = 44/418 (10%)
Query: 217 DEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKK- 275
D+VL+ IL L V S + CR ++ + + +C+ WG AL ++
Sbjct: 13 DQVLS--ILHLLPAESVLSFAAACRAFHAWASSDALWEALCRRDWGARAAAALAERRRRG 70
Query: 276 ---LGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMD 332
+ W R+ E+ L A+ R+ V+GA R + S LVLFGG + +D
Sbjct: 71 GGGVPWRRIYAEVALLGALSARRVPVKGASPRPRASHSLNLVAGWLVLFGGGCEGGRHLD 130
Query: 333 DTFVL-------NLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG-LLN 384
DT+V N +A W+++ +P GR+GH+ S+ G LV+FGG QG LN
Sbjct: 131 DTWVAYVGNGAGNRSSAVFSWQQLD-SGTPSGRFGHS-CSIVGDALVLFGGINDQGQRLN 188
Query: 385 DVFVLDLDAKQPTWIEVS------GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSD 438
D ++ + ++ +++S G P PR H++C ++ +V+ GG +G L D
Sbjct: 189 DTWIGQIICEESRRMKISWRLLEVGPHAPYPRGAHAACCVDDKFIVIHGGIGQSGSRLGD 248
Query: 439 TYLLDLTTD--KPMWREIP-TSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGES 495
T+LLDL+ +W +I T P SR GH+L+ G +++++FGG + +
Sbjct: 249 TWLLDLSNGLRSGIWHQIEDTEPLPLSRSGHTLTWIGGSRMVLFGGRGSEFDVL---NDV 305
Query: 496 YTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSP 555
+ +D+ + P+WK+L+ + + +G +P PR+ H A + G+I+++GG +
Sbjct: 306 WLLDINERYPKWKELKYDLSSVLGE----MPFPRVGHSATLVLGGKILVYGGEDSQRRRK 361
Query: 556 SQLFLLD-----------PSEEKPSWRILNVPGQPPKFAWGHSTCV-VGGTRVLVLGG 601
+ LD K W+ L + GQ P + H CV G V + GG
Sbjct: 362 DDFWTLDLPALLQFESGSKKMTKRMWKKLRIDGQCPNYRSFHGACVDTSGCHVYIFGG 419
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLL-------DLTTDKPMWREIPT 456
GA P PR+ HS ++ G ++ GGC + G L DT++ + ++ W+++ +
Sbjct: 98 GASPRPRASHSLNLVAGWLVLFGGGC-EGGRHLDDTWVAYVGNGAGNRSSAVFSWQQLDS 156
Query: 457 SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQ-----WKQLE 511
+P R GHS S+ G VL FGG+ G R +++ + EE + W+ LE
Sbjct: 157 G-TPSGRFGHSCSIVGDALVL-FGGINDQGQ---RLNDTWIGQIICEESRRMKISWRLLE 211
Query: 512 CNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPS-- 569
VG + P PR H A + I+I GG +LLD S S
Sbjct: 212 ------VGPHA---PYPRGAHAACCVDDKFIVIHGGIGQSGSRLGDTWLLDLSNGLRSGI 262
Query: 570 WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEL 612
W + P GH+ +GG+R+++ GG E VLN++
Sbjct: 263 WHQIEDTEPLPLSRSGHTLTWIGGSRMVLFGGRGSEFDVLNDV 305
>gi|302756203|ref|XP_002961525.1| hypothetical protein SELMODRAFT_76604 [Selaginella moellendorffii]
gi|300170184|gb|EFJ36785.1| hypothetical protein SELMODRAFT_76604 [Selaginella moellendorffii]
Length = 440
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 184/414 (44%), Gaps = 41/414 (9%)
Query: 216 SDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGAL-ELMTK 274
SD++L +L L + + G C R L ++ + +C+ WG V A +
Sbjct: 17 SDQLLI--VLHFLPVSGIVAFGLTCHRFYDLVSSDSLWARICRREWGDAVVDAWPNSRLR 74
Query: 275 KLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDT 334
K W +L E+ AV W + R + S A ++ +FGG + DT
Sbjct: 75 KRSWKQLYAEMLFCGAVAWHHLEQPDPLPLGRASHSMINAYGKVFVFGGGCEGGTALGDT 134
Query: 335 FVLNLDA----ANPEWRRVSVKSSPPGRWGHTLSSL-NGSWLVVFGGCGRQGL-LNDVFV 388
++ L + W+ +++ PP R+GH+ L + LV+FGG G D ++
Sbjct: 135 WIAPLPSNTLLTGIHWQLPRIQN-PPARFGHSCVYLEDVGLLVLFGGISDTGTRYLDTWI 193
Query: 389 LDLD--AKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT 446
D A +W + PL R H+ C K+VV GG + G L DT++LDL+
Sbjct: 194 NDTTTTAAASSWHLLPVSHSPLARGAHACCYAGDKKVVVFGGIRNDGARLHDTWVLDLSQ 253
Query: 447 DKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQ 506
+ P WRE+ T SP +R GH+L+ ++++FGG + H + + + + + L D+ P
Sbjct: 254 EPPSWREVATQASPCARSGHTLTRIATNRMVLFGG--RGAHFEVLN-DVWLLSLQDQRPT 310
Query: 507 WKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP--- 563
W +L + + P PR H A + RI+IFGG A +++LDP
Sbjct: 311 WTELS-------RTITDEAPSPRAGHSASIIFGNRILIFGGEDARRTKKRDVWVLDPEAV 363
Query: 564 ------------SEE---KPSWRILNVPGQPPKFAWGHSTCVVG-GTRVLVLGG 601
SE+ + W+ L V GQ P H C +G G VLV GG
Sbjct: 364 AAAAPSSSSPTCSEKNYGRKFWKKLRVRGQSPSRTSFHGACSLGTGHAVLVFGG 417
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 19/220 (8%)
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPM----WREIPTSWSPPS 462
PL R+ HS G V GGC + G L DT++ L ++ + W ++P +PP+
Sbjct: 103 PLGRASHSMINAYGKVFVFGGGC-EGGTALGDTWIAPLPSNTLLTGIHW-QLPRIQNPPA 160
Query: 463 RLGHSLSVYGRTKVL-MFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
R GHS +L +FGG++ +G L + + T W L +
Sbjct: 161 RFGHSCVYLEDVGLLVLFGGISDTGTRYLDTWINDTTTTAAAS-SWHLLPVSH------- 212
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
P R H ++++FGG ++LD S+E PSWR + P
Sbjct: 213 ---SPLARGAHACCYAGDKKVVVFGGIRNDGARLHDTWVLDLSQEPPSWREVATQASPCA 269
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ GH+ + R+++ GG VLN++ L L ++
Sbjct: 270 RS-GHTLTRIATNRMVLFGGRGAHFEVLNDVWLLSLQDQR 308
>gi|297608189|ref|NP_001061298.2| Os08g0230300 [Oryza sativa Japonica Group]
gi|255678250|dbj|BAF23212.2| Os08g0230300 [Oryza sativa Japonica Group]
Length = 495
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 201/445 (45%), Gaps = 71/445 (15%)
Query: 217 DEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALE----LM 272
D+VL+ IL L V S + CR ++ + + +C+ WG T AL
Sbjct: 13 DQVLS--ILHLLPAESVLSFAAACRAFHAWASSDALWEALCRRDWGARATAALAERRRRG 70
Query: 273 TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGG--EG----- 325
+ W R+ E+ L A+ R+ V+GA R + S LVLFGG EG
Sbjct: 71 GGGVPWRRIYAEVALLGALSARRVPVKGASPRPRASHSLNLVAGWLVLFGGGCEGGKDAK 130
Query: 326 ------------------VNM--QPMDDTFVL-------NLDAANPEWRRVSVKSSPPGR 358
+M + +DDT+V N +A W+++ +P GR
Sbjct: 131 STYLLTLSSRAYSGLWHEFHMLGRHLDDTWVAYVGNGAGNRSSAVFSWQQLD-SGTPSGR 189
Query: 359 WGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLDLDAKQPTWIEVS------GGAPPLPRS 411
+GH+ S+ G LV+FGG QG LND ++ + ++ +++S G P PR
Sbjct: 190 FGHS-CSIVGDALVLFGGINDQGQRLNDTWIGQIICEESRRMKISWRLLEVGPHAPYPRG 248
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD--KPMWREIP-TSWSPPSRLGHSL 468
H++C ++ +V+ GG +G L DT+LLDL+ +W +I T P SR GH+L
Sbjct: 249 AHAACCVDDKFIVIHGGIGQSGSRLGDTWLLDLSNGLRSGIWHQIEDTEPLPLSRSGHTL 308
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPP 528
+ G +++++FGG + + + +D+ + P+WK+L+ + + +G +P P
Sbjct: 309 TWIGGSRMVLFGGRGSEFDVL---NDVWLLDINERYPKWKELKYDLSSVLGE----MPFP 361
Query: 529 RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD-----------PSEEKPSWRILNVPG 577
R+ H A + G+I+++GG + + LD K W+ L + G
Sbjct: 362 RVGHSATLVLGGKILVYGGEDSQRRRKDDFWTLDLPALLQFESGSKKMTKRMWKKLRIDG 421
Query: 578 QPPKFAWGHSTCV-VGGTRVLVLGG 601
Q P + H CV G V + GG
Sbjct: 422 QCPNYRSFHGACVDTSGCHVYIFGG 446
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 100/249 (40%), Gaps = 54/249 (21%)
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD--KPMWREIPT----- 456
GA P PR+ HS ++ G ++ GGC + G TYLL L++ +W E
Sbjct: 98 GASPRPRASHSLNLVAGWLVLFGGGC-EGGKDAKSTYLLTLSSRAYSGLWHEFHMLGRHL 156
Query: 457 --------------------SW------SPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRL 490
SW +P R GHS S+ G VL FGG+ G
Sbjct: 157 DDTWVAYVGNGAGNRSSAVFSWQQLDSGTPSGRFGHSCSIVGDALVL-FGGINDQGQ--- 212
Query: 491 RSGESYTIDLGDEEPQ-----WKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIF 545
R +++ + EE + W+ LE VG + P PR H A + I+I
Sbjct: 213 RLNDTWIGQIICEESRRMKISWRLLE------VGPHA---PYPRGAHAACCVDDKFIVIH 263
Query: 546 GGSIAGLHSPSQLFLLDPSEEKPS--WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHT 603
GG +LLD S S W + P GH+ +GG+R+++ GG
Sbjct: 264 GGIGQSGSRLGDTWLLDLSNGLRSGIWHQIEDTEPLPLSRSGHTLTWIGGSRMVLFGGRG 323
Query: 604 GEEWVLNEL 612
E VLN++
Sbjct: 324 SEFDVLNDV 332
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 20/140 (14%)
Query: 315 GNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSS------PPGRWGHTLSSLNG 368
G+R+VLFGG G ++D ++L+++ P+W+ + S P R GH+ + + G
Sbjct: 313 GSRMVLFGGRGSEFDVLNDVWLLDINERYPKWKELKYDLSSVLGEMPFPRVGHSATLVLG 372
Query: 369 SWLVVFGGCGRQGLLNDVF-VLDLDA-----------KQPTWIEVS-GGAPPLPRSWHSS 415
++V+GG Q D F LDL A + W ++ G P RS+H +
Sbjct: 373 GKILVYGGEDSQRRRKDDFWTLDLPALLQFESGSKKMTKRMWKKLRIDGQCPNYRSFHGA 432
Query: 416 CI-IEGSKLVVSGGCTDAGV 434
C+ G + + GG D V
Sbjct: 433 CVDTSGCHVYIFGGMVDGLV 452
>gi|224109986|ref|XP_002315377.1| predicted protein [Populus trichocarpa]
gi|222864417|gb|EEF01548.1| predicted protein [Populus trichocarpa]
Length = 469
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 208/428 (48%), Gaps = 49/428 (11%)
Query: 212 ILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALE- 270
I++L+ + L IL L + S C+R R LT ++ + + +C+ WG AL+
Sbjct: 19 IVKLAQDHL-FTILLLLPIDSLISFARTCKRFRSLTSSDTLWESICRREWGSTSVDALKS 77
Query: 271 -LMTK---KLGWGRLARELTTLEAVCWRKFT---VRGAVEPSRCNFSACAAGNRLVLFGG 323
+ TK +L W RL ++++ L++V K + + R + + LVLFGG
Sbjct: 78 SINTKNNQQLPWMRLYKQVSQLDSVSCHKLSDPDSELMLPTPRASHCLNFVSDCLVLFGG 137
Query: 324 EGVNMQPMDDTFVL---NLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQ 380
+ +DDT+V N +W++V+ P GR+GH + G +LV+FGG +
Sbjct: 138 GCEGGRDLDDTWVAYIGNDFQRMLKWQKVN-SGIPNGRFGHACIVI-GDYLVLFGGINDR 195
Query: 381 GLL-NDVFVLDLDAKQP-----TW--IEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDA 432
G+ ND +V + + +W ++V APP PR H++C I+ S +V+ GG
Sbjct: 196 GIRQNDTWVGKVVLSENLGITLSWRLLDVRSIAPP-PRGAHAACCIDKSTMVIHGGIGLY 254
Query: 433 GVLLSDTYLLDLTTD--KPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRL 490
G+ + DT++L+L+ + WRE+ T SPP+R GH+L+ T +++FGG SG+ L
Sbjct: 255 GLRMGDTWILELSENFCSGTWRELVTHPSPPARSGHTLTCIEGTGIVLFGGRG-SGYDVL 313
Query: 491 RSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIA 550
+ + + + + E +W Q+ N + A V PR+ H A + GR++I+GG +
Sbjct: 314 H--DVWLLQVSEVELKWIQILYN----LQDIPAGVSLPRVGHSATLILGGRLLIYGGEDS 367
Query: 551 GLHSPSQLFLLD----PSEEKPS------------WRILNVPGQPPKFAWGHSTCV-VGG 593
H ++LD PS + S W++L G P H C G
Sbjct: 368 QRHRKDDFWVLDVSKIPSNKAQSPLNSRGLQANNMWKMLKAKGYKPYRRSFHRACADHSG 427
Query: 594 TRVLVLGG 601
R+ V GG
Sbjct: 428 CRLYVFGG 435
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD---KPMWREIPTSWSPPSR 463
P PR+ H + ++ GGC + G L DT++ + D W+++ S P R
Sbjct: 117 PTPRASHCLNFVSDCLVLFGGGC-EGGRDLDDTWVAYIGNDFQRMLKWQKV-NSGIPNGR 174
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEP-----QWKQLECNAFTGV 518
GH+ V G VL FGG+ G +R +++ + E W+ L+ +
Sbjct: 175 FGHACIVIGDYLVL-FGGINDRG---IRQNDTWVGKVVLSENLGITLSWRLLDVRS---- 226
Query: 519 GSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEE--KPSWRILNV 575
+ PPPR H A + ++I GG + GL ++L+ SE +WR L
Sbjct: 227 -----IAPPPRGAHAACCIDKSTMVIHGGIGLYGLRM-GDTWILELSENFCSGTWRELVT 280
Query: 576 PGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEL 612
PP + GH+ + GT +++ GG VL+++
Sbjct: 281 HPSPPARS-GHTLTCIEGTGIVLFGGRGSGYDVLHDV 316
>gi|168027067|ref|XP_001766052.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682695|gb|EDQ69111.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 434
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 188/427 (44%), Gaps = 51/427 (11%)
Query: 217 DEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWG-REVTGALELMTKK 275
D++L IL L + + + G C+R +++ + + + +C WG R V + ++
Sbjct: 1 DQILV--ILQFLPVQSLIAFGLTCKRFKEIAEGDSLWAFICVREWGSRAVHSWPKHGKER 58
Query: 276 LGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTF 335
GW + R++ L+A WRK G R + S C L++FGG + +DDT+
Sbjct: 59 GGWKWVYRQMLMLKAGSWRKVEQGGVSPAPRASHSLCTVAGNLIVFGGGCQGGRHLDDTW 118
Query: 336 VLNLDAANPE---WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLN-DVFVLDL 391
V +L E W+R ++ SP GR+G + + +N + +V+FGG QG D ++
Sbjct: 119 VASLPTEISEGIVWQRSNL-GSPSGRFGQSCTVVNDA-IVLFGGINDQGARQCDTWIKSG 176
Query: 392 DAK-----QPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT 446
+ P W V P PR H+ C ++V+ GG DT++LDL
Sbjct: 177 LSSGNMHDSPVWELVDVVKSPPPRGAHAGCCGGDGRVVIFGGIGTELNRFCDTWVLDLAE 236
Query: 447 DKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRS-GESYTIDLGDEEP 505
+W E+ T SPP+R GH+++ G ++++FGG +R + + +++ P
Sbjct: 237 SPLIWHEVITPVSPPARSGHTMTWIGGRRMILFGGRG----IRFEVLNDVWLLNMEGTFP 292
Query: 506 QWKQLE-CNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPS 564
QW +L C P PR H A + GRI+IFGG A ++LDP
Sbjct: 293 QWVELRPCE------QPLHDRPTPRAGHSATPIFGGRILIFGGEDARRSRKGDAWVLDPR 346
Query: 565 ---------------------EEKPS---WRILNVPGQPPKFAWGHSTCVV-GGTRVLVL 599
EEK + W+ L GQ P H C + G +LV
Sbjct: 347 AGVQVGCESSCMSSYTQKPLIEEKMAPRFWKKLKQLGQLPSRRSFHGACALDSGHSILVF 406
Query: 600 GGHTGEE 606
GG E
Sbjct: 407 GGMVDGE 413
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 107/233 (45%), Gaps = 20/233 (8%)
Query: 386 VFVLDLDAKQPTWIEV-SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDL 444
V+ L K +W +V GG P PR+ HS C + G+ +V GGC G L DT++ L
Sbjct: 64 VYRQMLMLKAGSWRKVEQGGVSPAPRASHSLCTVAGNLIVFGGGC-QGGRHLDDTWVASL 122
Query: 445 TTDKP---MWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLG 501
T+ +W+ SP R G S +V +++FGG+ G + + + G
Sbjct: 123 PTEISEGIVWQRSNLG-SPSGRFGQSCTVV-NDAIVLFGGINDQGARQCDTWIKSGLSSG 180
Query: 502 D--EEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLF 559
+ + P W+ ++ PPPR H GR++IFGG L+ +
Sbjct: 181 NMHDSPVWELVDV----------VKSPPPRGAHAGCCGGDGRVVIFGGIGTELNRFCDTW 230
Query: 560 LLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEL 612
+LD +E W + P PP + GH+ +GG R+++ GG VLN++
Sbjct: 231 VLDLAESPLIWHEVITPVSPPARS-GHTMTWIGGRRMILFGGRGIRFEVLNDV 282
>gi|225443349|ref|XP_002264976.1| PREDICTED: F-box/kelch-repeat protein At1g51550 [Vitis vinifera]
gi|297735772|emb|CBI18459.3| unnamed protein product [Vitis vinifera]
Length = 473
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 188/418 (44%), Gaps = 48/418 (11%)
Query: 223 NILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMT------KKL 276
+IL L + S C R R LT +E + + +C+ WG AL+ ++L
Sbjct: 36 SILLLLPTDSIISFSMTCSRFRSLTFSESLWEAICRRDWGPTTVDALKFSAEATNCQQQL 95
Query: 277 GWGRLARELTTLEAVCWRKFT--VRGAVEPS-RCNFSACAAGNRLVLFGGEGVNMQPMDD 333
W RL +++ L++V + + G V P R + S + LVLFGG + +DD
Sbjct: 96 SWMRLYKQVCQLDSVSCHRLSGPDAGMVLPKPRASLSLNFVSDCLVLFGGGSEGGRHIDD 155
Query: 334 TFVL---NLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL-NDVFVL 389
T+V N W +++ P GR+GHT + G+ LV+FGG G+ ND +V
Sbjct: 156 TWVAYIGNDFRRMLRWEKIT-SGIPSGRFGHTCVVI-GNHLVLFGGINDDGIRHNDTWVG 213
Query: 390 DLDAKQPTWIEVS------GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLD 443
+ + VS G P PR H+ C I +++V+ GG G+ L DT++LD
Sbjct: 214 QVALNETLGFTVSWRLLDVGSVAPPPRGAHAGCCIGNNRMVIHGGIGLYGLRLGDTWMLD 273
Query: 444 LTTDKPM--WREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLG 501
L+ + W E+ T SPP+R GH+L+ G ++ ++FGG S ++ + + +
Sbjct: 274 LSENLCFGTWHEVVTHPSPPARSGHTLTCIGGSRTVLFGGRGLSYNVL---NDLWLFEFS 330
Query: 502 DEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLL 561
+ +W Q+ + + + PR+ H A + GR++I+GG + H ++L
Sbjct: 331 EVYSKWVQI----LYELKNVPGGISLPRVGHSATLILGGRVLIYGGEDSQRHRKDDFWVL 386
Query: 562 D--------PSEEKP---------SWRILNVPGQPPKFAWGHSTCVVGGTRVL-VLGG 601
D P P W+ LN G P+ H C R L V GG
Sbjct: 387 DTGAITSVNPINPIPLNSRGLLVNIWKRLNAEGYKPECRSFHGACTDRSGRFLFVFGG 444
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 402 SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD-KPMWR-EIPTSWS 459
+G P PR+ S + LV+ GG ++ G + DT++ + D + M R E TS
Sbjct: 120 AGMVLPKPRASLSLNFVSDC-LVLFGGGSEGGRHIDDTWVAYIGNDFRRMLRWEKITSGI 178
Query: 460 PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEP-----QWKQLECNA 514
P R GH+ V G VL FGG+ G +R +++ + E W+ L+
Sbjct: 179 PSGRFGHTCVVIGNHLVL-FGGINDDG---IRHNDTWVGQVALNETLGFTVSWRLLD--- 231
Query: 515 FTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEEK--PSWR 571
VGS V PPPR H + R++I GG + GL ++LD SE +W
Sbjct: 232 ---VGS---VAPPPRGAHAGCCIGNNRMVIHGGIGLYGLRL-GDTWMLDLSENLCFGTWH 284
Query: 572 ILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEL 612
+ PP + GH+ +GG+R ++ GG VLN+L
Sbjct: 285 EVVTHPSPPARS-GHTLTCIGGSRTVLFGGRGLSYNVLNDL 324
>gi|253317647|gb|ACT22760.1| F-box protein [Allium cepa]
Length = 437
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 203/417 (48%), Gaps = 44/417 (10%)
Query: 220 LAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGAL----ELMTKK 275
+ +IL L + S C+R+R L + + + VC WG + AL L+ K
Sbjct: 1 MIFSILQLLPYDSILSFSMTCKRLRFLATSNSLWEYVCIRDWGAQSIDALISTSTLLNKD 60
Query: 276 ---LGWGRLARELTTLEAV-CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPM 331
+ W R+ +E+ + + C R F+ G V +R + S LVLFGG + +
Sbjct: 61 RSCISWIRVYKEICGVGSFSCDRLFSEDGMVPMARASHSLNFVSGCLVLFGGGCEGGRHL 120
Query: 332 DDTFV-LNLDAANPEWRRVSVK----SSPPGRWGHTLSSLNGSWLVVFGGCGRQGL-LND 385
DDT++ L + N + RR+ K +SP GR+GHT ++++ S L++FGG G+ ND
Sbjct: 121 DDTWIALAKENQNNKRRRLIWKKMHANSPTGRFGHTCTTIDDSTLILFGGINDNGIRQND 180
Query: 386 VFVLDLDAK-QPT--W--IEVSGGAPPLPRSWHSSCI-IEGSKLVVSGGCTDAGVLLSDT 439
++V + + PT W ++ G P PR H++C+ LV+ GG + +G+ LSDT
Sbjct: 181 LWVGHVSPQPNPTISWHALQNVGPCSPPPRGAHAACLSTTHLTLVIHGGISLSGLRLSDT 240
Query: 440 YLLDLTTD--KPMWREIPT-SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESY 496
+LLDL+ W + P SPP+R GHSL+ G T+ ++ G SG+ L + +
Sbjct: 241 WLLDLSNGPYSTSWCQFPNLDPSPPARSGHSLTWIGGTRHMVLFGGRGSGYEVLN--DLW 298
Query: 497 TIDLGDEEPQWKQLEC-NAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSP 555
DL P+W +++ N+ T + + P PR+ H A M G+I+I+GG +
Sbjct: 299 VFDL--LGPKWTEIKYENSMTNMET-----PSPRVGHSANVMIGGKILIYGGEDSQRQRK 351
Query: 556 SQLFLLD----------PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVL-VLGG 601
L++LD + K W+ + V P + H +C R L V GG
Sbjct: 352 DDLWILDVNALLSRYHNKATLKLLWKRVKVKNWAPGYRSFHGSCTDKFGRCLYVFGG 408
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 26/222 (11%)
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD------KPMWREIPTS 457
G P+ R+ HS + G ++ GGC + G L DT++ + + +W+++ +
Sbjct: 89 GMVPMARASHSLNFVSGCLVLFGGGC-EGGRHLDDTWIALAKENQNNKRRRLIWKKMHAN 147
Query: 458 WSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWK-QLECNAFT 516
SP R GH+ + + +++FGG+ +G +R + + +G PQ + +A
Sbjct: 148 -SPTGRFGHTCTTIDDSTLILFGGINDNG---IRQNDLW---VGHVSPQPNPTISWHALQ 200
Query: 517 GVGSQSAVVPPPRLDHVA-VSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSE--EKPSW-R 571
VG S PPPR H A +S ++I GG S++GL S +LLD S SW +
Sbjct: 201 NVGPCS---PPPRGAHAACLSTTHLTLVIHGGISLSGLRL-SDTWLLDLSNGPYSTSWCQ 256
Query: 572 ILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEW-VLNEL 612
N+ PP + GHS +GGTR +VL G G + VLN+L
Sbjct: 257 FPNLDPSPPARS-GHSLTWIGGTRHMVLFGGRGSGYEVLNDL 297
>gi|147799808|emb|CAN68359.1| hypothetical protein VITISV_029196 [Vitis vinifera]
Length = 473
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 187/418 (44%), Gaps = 48/418 (11%)
Query: 223 NILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMT------KKL 276
+IL L + S C R R LT +E + + +C+ WG AL+ ++L
Sbjct: 36 SILLLLPTDSIISFSMTCSRFRSLTFSESLWEAICRRDWGPTTVDALKFSAEATNCQQQL 95
Query: 277 GWGRLARELTTLEAVCWRKFT--VRGAVEPS-RCNFSACAAGNRLVLFGGEGVNMQPMDD 333
W RL +++ L++V + + G V P R + S + LVLFGG + +DD
Sbjct: 96 SWMRLYKQVCQLDSVSCHRLSGPDAGMVLPKPRASHSLNFVSDCLVLFGGGSEGGRHIDD 155
Query: 334 TFVL---NLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL-NDVFVL 389
T+V N W +++ P GR+GHT + G+ LV+FGG G+ ND +V
Sbjct: 156 TWVAYIGNDFRRMLRWEKIT-SGIPSGRFGHTCVVI-GNHLVLFGGINDDGIRHNDTWVG 213
Query: 390 DLDAKQPTWIEVS------GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLD 443
+ + VS G P PR H+ C I +++V+ GG G+ L DT++LD
Sbjct: 214 QVAPNETLGFTVSWRLLDVGSVAPPPRGAHAGCCIGNNRMVIHGGIGLYGLRLGDTWMLD 273
Query: 444 LTTDKPM--WREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLG 501
L+ + W E+ T SPP+R GH+L+ G ++ ++FGG S ++ + + +
Sbjct: 274 LSENLCFGTWHEVVTHPSPPARSGHTLTCIGGSRTVLFGGRGLSYNVL---NDLWLFEFS 330
Query: 502 DEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLL 561
+ +W Q+ G S PR+ H A + GR++I+GG + H ++L
Sbjct: 331 EVYSKWVQILYELKNVPGGISL----PRVGHSATLILGGRVLIYGGEDSQRHRKDDFWVL 386
Query: 562 D--------PSEEKP---------SWRILNVPGQPPKFAWGHSTCVVGGTRVL-VLGG 601
D P P W+ LN G P+ H C R L V GG
Sbjct: 387 DTGAITSVNPINPIPLNSRGLLVNIWKRLNAEGYKPECRSFHGACTDRSGRFLFVFGG 444
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 402 SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD-KPMWR-EIPTSWS 459
+G P PR+ HS + LV+ GG ++ G + DT++ + D + M R E TS
Sbjct: 120 AGMVLPKPRASHSLNFVSDC-LVLFGGGSEGGRHIDDTWVAYIGNDFRRMLRWEKITSGI 178
Query: 460 PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEP-----QWKQLECNA 514
P R GH+ V G VL FGG+ G +R +++ + E W+ L+
Sbjct: 179 PSGRFGHTCVVIGNHLVL-FGGINDDG---IRHNDTWVGQVAPNETLGFTVSWRLLD--- 231
Query: 515 FTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEEK--PSWR 571
VGS V PPPR H + R++I GG + GL ++LD SE +W
Sbjct: 232 ---VGS---VAPPPRGAHAGCCIGNNRMVIHGGIGLYGLRL-GDTWMLDLSENLCFGTWH 284
Query: 572 ILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEL 612
+ PP + GH+ +GG+R ++ GG VLN+L
Sbjct: 285 EVVTHPSPPARS-GHTLTCIGGSRTVLFGGRGLSYNVLNDL 324
>gi|297852882|ref|XP_002894322.1| hypothetical protein ARALYDRAFT_474268 [Arabidopsis lyrata subsp.
lyrata]
gi|297340164|gb|EFH70581.1| hypothetical protein ARALYDRAFT_474268 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 192/405 (47%), Gaps = 45/405 (11%)
Query: 233 VASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLG--WGRLARELTTLEA 290
+ S C+R + L ++ + + +C+ WG AL+L + + G W + + + +++
Sbjct: 40 ILSFSMTCKRYKSLACSDSLWEALCEREWGPTSVDALKLSSLRDGFSWMLMFQRVYKMDS 99
Query: 291 VCWRKFTVRGAVEPS-------RCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
VC K + + R + S + LVLFGG + +DDT+ +D +N
Sbjct: 100 VCCHKISDPDDDDEESSSFPIPRASHSLNFVNDHLVLFGGGCQGGRHLDDTWTSYVDKSN 159
Query: 344 P---EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLDLDAKQP-TW 398
+W++V +P GR+GHT + G +L++FGG +G LND ++ + + W
Sbjct: 160 QSILKWKKVE-SGTPSGRFGHTCIVI-GEYLLLFGGINDRGERLNDTWIGQVFCHEGLAW 217
Query: 399 IEVSGGA----PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD--KPMWR 452
++ G+ P PR HS+C I K+VV GG GV L DT++L+L+ D W
Sbjct: 218 KLLNVGSLQRPCPPPRGAHSACCIAEKKMVVHGGIGLNGVRLGDTWILELSEDFTSGTWH 277
Query: 453 EIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE-EPQWKQLE 511
+ + SPP R GH+L+ +V++FGG + + + +D+ ++ E +W Q+
Sbjct: 278 MVESQQSPPPRSGHTLTCIRENQVVLFGGRGLGYDVL---DDVWILDIQEQCEEKWIQIF 334
Query: 512 CNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD-----PSEE 566
N F V +++ PR+ H A + GRI+I+GG + H ++LD S
Sbjct: 335 YN-FQDVPEHASL---PRVGHSATLVLGGRILIYGGEDSYRHRKDDFWVLDVKTIPSSGL 390
Query: 567 KPS---------WRILNVPGQPPKFAWGHSTCV-VGGTRVLVLGG 601
KP W+ L+ PK H CV G V V GG
Sbjct: 391 KPQGLSLNGSSVWKKLDRISYGPKSRSFHRACVDCSGRFVYVFGG 435
>gi|9759079|dbj|BAB09557.1| unnamed protein product [Arabidopsis thaliana]
Length = 84
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/63 (90%), Positives = 60/63 (95%)
Query: 562 DPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
DPS+EKPSWRILNVPG+PPK AWGHSTCVVGGTRVLVLGGH GEEW+LNELHELCLAS Q
Sbjct: 21 DPSKEKPSWRILNVPGKPPKLAWGHSTCVVGGTRVLVLGGHNGEEWILNELHELCLASWQ 80
Query: 622 DSD 624
DSD
Sbjct: 81 DSD 83
>gi|224100511|ref|XP_002311905.1| predicted protein [Populus trichocarpa]
gi|222851725|gb|EEE89272.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 203/430 (47%), Gaps = 52/430 (12%)
Query: 212 ILQLSDEVLAHNILSRLTPRD-VASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALE 270
I++L+D+ L +L L P D + S C+R R LT ++ + + +C+ WG A +
Sbjct: 24 IVKLADDHLFTIML--LLPVDSLISFAMTCKRFRSLTTSDTLWESICRREWGSTSVDAFK 81
Query: 271 LM-----TKKLGWGRLARELTTLEAVCWRKFTVRGA---VEPSRCNFSACAAGNRLVLFG 322
++L W RL ++++ L++ K + + R + S + LVLFG
Sbjct: 82 SSINTNNNQQLPWMRLYKQVSQLDSFSCHKLPDPDSDLMLPTPRASHSLNFVSDCLVLFG 141
Query: 323 GEGVNMQPMDDTFVLNLDAANP---EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGR 379
G + +DDT+V + +W++V+ P GR+GHT + + G LV+FGG
Sbjct: 142 GGREGGRDLDDTWVAYIGKDFQRMLKWQKVT-SGIPSGRFGHTCAVI-GENLVLFGGIND 199
Query: 380 QGLL-NDVFV------LDLDAKQPTW--IEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCT 430
+G+ ND +V +L +W ++VS APP PR H++C I+ +V+ GG
Sbjct: 200 RGMRQNDTWVGQVVLGENLGITTLSWRLLDVSSVAPP-PRGAHAACCIDKRTMVIHGGIG 258
Query: 431 DAGVLLSDTYLLDLTTD--KPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHL 488
G+ L DT++L+L+ + W E+ SPP R GH+L+ T ++FGG G+
Sbjct: 259 LYGLRLGDTWILELSENFCSGTWIELVAHPSPPPRSGHTLTCIEGTGTVLFGGRGL-GYD 317
Query: 489 RLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGS 548
L + + + +++ +W Q+ N + V PR+ H A + GR++I+GG
Sbjct: 318 VLH--DVWLLQASEDQLKWVQMLYN----LQDIPEGVSLPRVGHSATLILGGRLLIYGGE 371
Query: 549 IAGLHSPSQLFLLD----PSEEKPS------------WRILNVPGQPPKFAWGHSTCV-V 591
+ H ++LD PS ++ S WR L G P H C
Sbjct: 372 DSQRHRKGDFWVLDVSKIPSIKEQSTPLNSRGLQANMWRRLKAKGYKPNCRSFHRACADH 431
Query: 592 GGTRVLVLGG 601
G R+ V GG
Sbjct: 432 SGRRLYVFGG 441
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 130/299 (43%), Gaps = 49/299 (16%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFV------LNLDAANPEW 346
W+K T + R + G LVLFGG +DT+V NL W
Sbjct: 168 WQKVT--SGIPSGRFGHTCAVIGENLVLFGGINDRGMRQNDTWVGQVVLGENLGITTLSW 225
Query: 347 RRVSVKS-SPPGRWGHTLSSLNGSWLVVFGGCGRQGL-LNDVFVLDLDAK--QPTWIEVS 402
R + V S +PP R H ++ +V+ GG G GL L D ++L+L TWIE+
Sbjct: 226 RLLDVSSVAPPPRGAHAACCIDKRTMVIHGGIGLYGLRLGDTWILELSENFCSGTWIELV 285
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMW-------REIP 455
P PRS H+ IEG+ V+ GG +L D +LL + D+ W ++IP
Sbjct: 286 AHPSPPPRSGHTLTCIEGTGTVLFGGRGLGYDVLHDVWLLQASEDQLKWVQMLYNLQDIP 345
Query: 456 TSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDL--------------- 500
S P R+GHS ++ ++L++GG H R G+ + +D+
Sbjct: 346 EGVSLP-RVGHSATLILGGRLLIYGGEDSQRH---RKGDFWVLDVSKIPSIKEQSTPLNS 401
Query: 501 -GDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCG-RIIIFGGSIAGLHSPSQ 557
G + W++L+ + P R H A + G R+ +FGG + L P++
Sbjct: 402 RGLQANMWRRLKAKGYK---------PNCRSFHRACADHSGRRLYVFGGMVDSLLHPAE 451
>gi|302775742|ref|XP_002971288.1| hypothetical protein SELMODRAFT_171948 [Selaginella moellendorffii]
gi|300161270|gb|EFJ27886.1| hypothetical protein SELMODRAFT_171948 [Selaginella moellendorffii]
Length = 444
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 186/418 (44%), Gaps = 45/418 (10%)
Query: 216 SDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGAL-ELMTK 274
SD++L +L L + + G C R L ++ + +C+ WG V A +
Sbjct: 17 SDQLLI--VLHFLPVSGIVAFGLTCHRFYDLVSSDSLWARICRREWGEAVVDAWPNSRLR 74
Query: 275 KLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDT 334
K W +L E+ AV W + R + S AG ++ +FGG + DT
Sbjct: 75 KRSWKQLYAEMLFCGAVAWHHLEQPDPLPLGRASHSMINAGGKVFVFGGGCEGGIALGDT 134
Query: 335 FVLNLDA----ANPEWRRVSVKSSPPGRWGHTLSSL-NGSWLVVFGGCGRQGL-LNDVFV 388
++ L + W+ +++ PP R+GH+ L + LV+FGG G D ++
Sbjct: 135 WIAPLPSNTLLTGIHWQLPRIQN-PPARFGHSCVYLEDVGLLVLFGGISDTGTRYLDTWI 193
Query: 389 LDLDAKQ------PTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLL 442
D A +W + PL R H+ C K+VV GG + G L DT++L
Sbjct: 194 NDTTAAAAAAAAASSWHLLPVSHSPLARGAHACCYAGDKKVVVFGGIRNDGARLHDTWVL 253
Query: 443 DLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD 502
DL+ + P WRE+ T SP +R GH+L+ ++++FGG + H + + + + ++L D
Sbjct: 254 DLSQEPPSWREVATQASPCARSGHTLTRIATNQMVLFGG--RGAHFEVLN-DVWLLNLQD 310
Query: 503 EEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD 562
+ P W +L + + P PR H A + RI+IFGG A +++LD
Sbjct: 311 QRPTWTELS-------RTITDEAPSPRAGHSASIIFGNRILIFGGEDARRTKKRDVWVLD 363
Query: 563 P---------------SEE---KPSWRILNVPGQPPKFAWGHSTCVVG-GTRVLVLGG 601
P SE+ + W+ L V GQ P H C +G G VLV GG
Sbjct: 364 PEAVAAAAPSSSSPTCSEKNYGRKFWKKLRVRGQFPSRTSFHGACSLGTGHAVLVFGG 421
>gi|255555596|ref|XP_002518834.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223542007|gb|EEF43552.1| ubiquitin-protein ligase, putative [Ricinus communis]
Length = 462
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 189/420 (45%), Gaps = 41/420 (9%)
Query: 210 CGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGAL 269
C ++ ++ + L IL L + S G C+R LT ++ + + +C+ WG AL
Sbjct: 27 CPMINIAQDHL-FTILLLLPIDSILSFGMTCKRFTSLTSSDALWESICKRDWGPTSVDAL 85
Query: 270 ELMTKKLGWGRLARELTTLEAVCWRKFT---VRGAVEPSRCNFSACAAGNRLVLFGGEGV 326
+ + W RL ++++ L+ + K + + R + S + LVLFGG
Sbjct: 86 K--NQHFPWMRLYKQVSLLDTISCHKLSDPDTDSLLPSPRASHSLNFISDCLVLFGGGCE 143
Query: 327 NMQPMDDTFVLNLDAANP---EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGL- 382
+ +DDT+V + P +W++V P GR+GHT + G LV+FGG +G+
Sbjct: 144 GGRHLDDTWVAYIGNEFPRTFKWQKVD-SGVPSGRFGHTCVVI-GHLLVLFGGINDRGIR 201
Query: 383 LNDVFVLDLDAKQP-----TW--IEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVL 435
ND ++ L +W + V APP R H++C I+ K+V+ GG G+
Sbjct: 202 QNDTWIGQLIFSDNLCISLSWRLLSVQSLAPP-SRGAHAACCIDQRKMVIQGGIGLNGLR 260
Query: 436 LSDTYLLDLTTDKPM--WREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSG 493
L DT++L+L+ + W E+ SPP R GHSL+ G +++FGG +
Sbjct: 261 LGDTWVLELSENLCFGTWHELVIHPSPPPRSGHSLTCIGEPGLVLFGGRGLGYEVL---N 317
Query: 494 ESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLH 553
+ + + + D + +W Q+ + + V PR+ H A GR++I+GG + H
Sbjct: 318 DVWLLQMSDGQLKWVQM----LYELQNIPEGVSLPRVGHSATLTLGGRVLIYGGEDSYRH 373
Query: 554 SPSQLFLLDPSEEKPS-----------WRILNVPGQPPKFAWGHSTCVVGGTRVL-VLGG 601
++LD S + W+ L G P H C R L V GG
Sbjct: 374 RKDDFWMLDISSMISTQMLPTALRANMWKRLKAKGYKPNRRSFHRACGDHSGRYLYVFGG 433
>gi|21593470|gb|AAM65437.1| F-box protein ZEITLUPE/FKF/LKP/ADAGIO family [Arabidopsis thaliana]
Length = 478
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 192/405 (47%), Gaps = 45/405 (11%)
Query: 233 VASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLG--WGRLARELTTLEA 290
+ S C+R + L ++ + + +C+ WG AL+L + + G W + + + +++
Sbjct: 41 ILSFSMTCKRYKSLACSDSLWEALCEREWGPTSVDALKLSSLRDGFSWMLMFQRVYKMDS 100
Query: 291 VCWRKFTVRGAVEPS-------RCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
VC K + + R + S + LVLFGG + +DDT+ +D +N
Sbjct: 101 VCCHKISDPDDDDEESSSFPIPRASHSLNFVNDHLVLFGGGCQGGRHLDDTWTSYVDKSN 160
Query: 344 P---EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLDLDAKQP-TW 398
+W++V +P GR+GHT + G +L++FGG +G LND ++ + + +W
Sbjct: 161 QSILKWKKVK-SGTPSGRFGHTCIVI-GEYLLLFGGINDRGERLNDTWIGQVFCHEGLSW 218
Query: 399 IEVSGGA----PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD--KPMWR 452
++ G+ P PR HS+C I K+VV GG GV L DT++L+L+ D W
Sbjct: 219 KLLNVGSLQRPRPPPRGAHSACCIAEKKMVVHGGIGQNGVRLGDTWILELSEDFSSGTWH 278
Query: 453 EIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE-EPQWKQLE 511
+ + PP R GH+L+ +V++FGG G+ L + + +D+ + E +W Q+
Sbjct: 279 MVESPQLPPPRSGHTLTCIRENQVVLFGGRGL-GYDVL--DDVWILDIQEPCEEKWIQIF 335
Query: 512 CNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD-----PSEE 566
+ F V +++ PR+ H A + GRI+I+GG + H ++LD S
Sbjct: 336 YD-FQDVPEYASL---PRVGHSATLVLGGRILIYGGEDSYRHRKDDFWVLDVKTIPSSGL 391
Query: 567 KPS---------WRILNVPGQPPKFAWGHSTCVVGGTRVL-VLGG 601
KP W+ L+ PK H C R L V GG
Sbjct: 392 KPQGLSLNGSSVWKKLDRISYGPKSRSFHRACADCSGRFLYVFGG 436
>gi|357145258|ref|XP_003573580.1| PREDICTED: F-box/kelch-repeat protein At1g51550-like [Brachypodium
distachyon]
Length = 444
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 193/415 (46%), Gaps = 42/415 (10%)
Query: 217 DEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKL 276
D+VL+ IL RL V S + CR R ++ + + + + G AL +
Sbjct: 13 DQVLS--ILRRLPAEAVLSFAATCRAFRAWASSDVLWEALFRRDCGGRAAAALAERRRDR 70
Query: 277 GWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDD--- 333
W R+ ++ L A+ R+ V+G R + S LV+FGG + +DD
Sbjct: 71 PWRRVYADVARLGALSARRLRVKGVSPRPRASHSLNLVAGWLVVFGGGCEGGRHLDDIWA 130
Query: 334 TFVLNLDAANP-----EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGL-LNDVF 387
T+V N A N W++++ +P GR+GH+ L G LV+FGG +GL LND +
Sbjct: 131 TYVGN-GAGNRLSNILNWQQLA-SGTPSGRFGHS-CILVGDALVLFGGINDRGLRLNDTW 187
Query: 388 VLDLDAKQPTWIEVS------GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYL 441
+ + ++P + +S G P PR H++C ++ +V+ GG G L DT+L
Sbjct: 188 IGQIICEEPCRMRISWRLLEVGPLAPSPRGAHAACCVDDKFIVIHGGIGLNGSRLGDTWL 247
Query: 442 LDLT--TDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTI 498
LD++ WR++ + PS R GH+L+ G T++++FGG + + +
Sbjct: 248 LDISGGLQSGSWRQMGDTGPLPSPRSGHTLTWIGETRMVLFGGRGSEYDVL---NDVWLF 304
Query: 499 DLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQL 558
D+G P+WK+L+ + + +G +P PR+ H A + +I+++GG +
Sbjct: 305 DIGHHFPRWKELKYDLSSVLGE----LPFPRVGHSATHLLGSKILVYGGEDSQRRRMDDF 360
Query: 559 FLLD-----------PSEEKPSWRILNVPGQPPKFAWGHSTCV-VGGTRVLVLGG 601
++LD K W+ L + GQ P H CV RV V GG
Sbjct: 361 WILDVPALLQFESGSRKMAKRMWKKLRIDGQSPNCRSFHGACVDTSDCRVYVFGG 415
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 43/292 (14%)
Query: 347 RRVSVKS-SPPGRWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLD-------AKQPT 397
RR+ VK SP R H+L+ + G WLVVFGG C L+D++ + +
Sbjct: 88 RRLRVKGVSPRPRASHSLNLVAG-WLVVFGGGCEGGRHLDDIWATYVGNGAGNRLSNILN 146
Query: 398 WIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPM-----WR 452
W +++ G P R HS CI+ G LV+ GG D G+ L+DT++ + ++P WR
Sbjct: 147 WQQLASGTPS-GRFGHS-CILVGDALVLFGGINDRGLRLNDTWIGQIICEEPCRMRISWR 204
Query: 453 EIPTS-WSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDL--GDEEPQWKQ 509
+ +P R H+ +++ GG+ +G R G+++ +D+ G + W+Q
Sbjct: 205 LLEVGPLAPSPRGAHAACCVDDKFIVIHGGIGLNGS---RLGDTWLLDISGGLQSGSWRQ 261
Query: 510 LECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPS 569
+ + +P PR H + R+++FGG + + ++L D P
Sbjct: 262 M---------GDTGPLPSPRSGHTLTWIGETRMVLFGGRGSEYDVLNDVWLFDIGHHFPR 312
Query: 570 WRIL-----NVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEE------WVLN 610
W+ L +V G+ P GHS + G+++LV GG + W+L+
Sbjct: 313 WKELKYDLSSVLGELPFPRVGHSATHLLGSKILVYGGEDSQRRRMDDFWILD 364
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 97/223 (43%), Gaps = 29/223 (13%)
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLL-------DLTTDKPMWREIPT 456
G P PR+ HS ++ G +V GGC + G L D + + ++ W+++ +
Sbjct: 94 GVSPRPRASHSLNLVAGWLVVFGGGC-EGGRHLDDIWATYVGNGAGNRLSNILNWQQLAS 152
Query: 457 SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEP-----QWKQLE 511
+P R GHS + G VL FGG+ G LR +++ + EEP W+ LE
Sbjct: 153 G-TPSGRFGHSCILVGDALVL-FGGINDRG---LRLNDTWIGQIICEEPCRMRISWRLLE 207
Query: 512 CNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSE--EKPS 569
P PR H A + I+I GG +LLD S + S
Sbjct: 208 VGPLA---------PSPRGAHAACCVDDKFIVIHGGIGLNGSRLGDTWLLDISGGLQSGS 258
Query: 570 WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEL 612
WR + G P GH+ +G TR+++ GG E VLN++
Sbjct: 259 WRQMGDTGPLPSPRSGHTLTWIGETRMVLFGGRGSEYDVLNDV 301
>gi|51968990|dbj|BAD43187.1| unknown protein [Arabidopsis thaliana]
gi|51969154|dbj|BAD43269.1| unknown protein [Arabidopsis thaliana]
Length = 476
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 190/405 (46%), Gaps = 45/405 (11%)
Query: 233 VASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLG--WGRLARELTTLEA 290
+ S C+R + L ++ + + +C+ WG AL+L + + G W + + + +++
Sbjct: 39 ILSFSMTCKRYKSLACSDSLWEALCEREWGPTSVDALKLSSLRDGFSWMLMFQRVYKMDS 98
Query: 291 VCWRKFTVRGAVEPS-------RCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
VC K + + R + S + LVLFGG + +DDT+ +D +N
Sbjct: 99 VCCHKISDPDDDDEESSSFPIPRASHSLNFVNDHLVLFGGGCQGGRHLDDTWTSYVDKSN 158
Query: 344 P---EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLDLDAKQP-TW 398
+W++V +P GR+GHT + G +L++FGG +G LND ++ + + +W
Sbjct: 159 QSILKWKKVK-SGTPSGRFGHTCIVI-GEYLLLFGGINDRGERLNDTWIGQVFCHEGLSW 216
Query: 399 IEVSGGA----PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD--KPMWR 452
++ G+ P PR HS+C I K+VV GG GV L DT++L+L+ D W
Sbjct: 217 KLLNVGSLQRPRPPPRGAHSACCIAEKKMVVHGGIGLNGVRLGDTWILELSEDFSSGTWH 276
Query: 453 EIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE-EPQWKQLE 511
+ + PP R GH+L+ +V++FGG + + + +D+ + E +W Q+
Sbjct: 277 MVESPQLPPPRSGHTLTCIRENQVVLFGGRGLGYDVL---DDVWILDIQEPCEEKWIQIF 333
Query: 512 CNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD-----PSEE 566
+ F V +++ PR+ H A + GRI+I+GG + H ++LD S
Sbjct: 334 YD-FQDVPEYASL---PRVGHSATLVLGGRILIYGGEDSYRHRKDDFWVLDVKTIPSSGL 389
Query: 567 KPS---------WRILNVPGQPPKFAWGHSTCVVGGTRVL-VLGG 601
KP W+ L+ PK H C R L V GG
Sbjct: 390 KPQGLSLNGSSVWKKLDRISYGPKSRSFHRACADCSGRFLYVFGG 434
>gi|18403574|ref|NP_564592.1| F-box/kelch-repeat protein [Arabidopsis thaliana]
gi|75169531|sp|Q9C8K7.1|FBK21_ARATH RecName: Full=F-box/kelch-repeat protein At1g51550
gi|12325373|gb|AAG52632.1|AC024261_19 hypothetical protein; 21456-23101 [Arabidopsis thaliana]
gi|115646730|gb|ABJ17097.1| At1g51550 [Arabidopsis thaliana]
gi|332194561|gb|AEE32682.1| F-box/kelch-repeat protein [Arabidopsis thaliana]
Length = 478
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 190/405 (46%), Gaps = 45/405 (11%)
Query: 233 VASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLG--WGRLARELTTLEA 290
+ S C+R + L ++ + + +C+ WG AL+L + + G W + + + +++
Sbjct: 41 ILSFSMTCKRYKSLACSDSLWEALCEREWGPTSVDALKLSSLRDGFSWMLMFQRVYKMDS 100
Query: 291 VCWRKFTVRGAVEPS-------RCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
VC K + + R + S + LVLFGG + +DDT+ +D +N
Sbjct: 101 VCCHKISDPDDDDEESSSFPIPRASHSLNFVNDHLVLFGGGCQGGRHLDDTWTSYVDKSN 160
Query: 344 P---EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLDLDAKQP-TW 398
+W++V +P GR+GHT + G +L++FGG +G LND ++ + + +W
Sbjct: 161 QSILKWKKVK-SGTPSGRFGHTCIVI-GEYLLLFGGINDRGERLNDTWIGQVFCHEGLSW 218
Query: 399 IEVSGGA----PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD--KPMWR 452
++ G+ P PR HS+C I K+VV GG GV L DT++L+L+ D W
Sbjct: 219 KLLNVGSLQRPRPPPRGAHSACCIAEKKMVVHGGIGLNGVRLGDTWILELSEDFSSGTWH 278
Query: 453 EIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE-EPQWKQLE 511
+ + PP R GH+L+ +V++FGG + + + +D+ + E +W Q+
Sbjct: 279 MVESPQLPPPRSGHTLTCIRENQVVLFGGRGLGYDVL---DDVWILDIQEPCEEKWIQIF 335
Query: 512 CNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD-----PSEE 566
+ F V +++ PR+ H A + GRI+I+GG + H ++LD S
Sbjct: 336 YD-FQDVPEYASL---PRVGHSATLVLGGRILIYGGEDSYRHRKDDFWVLDVKTIPSSGL 391
Query: 567 KPS---------WRILNVPGQPPKFAWGHSTCVVGGTRVL-VLGG 601
KP W+ L+ PK H C R L V GG
Sbjct: 392 KPQGLSLNGSSVWKKLDRISYGPKSRSFHRACADCSGRFLYVFGG 436
>gi|356522260|ref|XP_003529765.1| PREDICTED: F-box/kelch-repeat protein At1g51550-like [Glycine max]
Length = 498
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 185/388 (47%), Gaps = 38/388 (9%)
Query: 197 SGGHSPLSQHQDICG--ILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRK 254
SG HS S CG I ++ + L IL L + S+ C+R R LT + + K
Sbjct: 9 SGNHSYSS-----CGSPISNMAQDYL-FTILLLLPIDAILSLSITCKRFRALTSSHTLWK 62
Query: 255 MVCQNAWGREVTGALELMT--KKLGWGRLARELTTLEAVCWRKFTVRGAVEPS-RCNFSA 311
+C+ G +L + W RL ++++ +++VC K V P+ R + S
Sbjct: 63 SLCKRDLGSTCVDSLSSNNQHRHFPWMRLYKQVSQMDSVCCHKLLVSDLDFPAARASHSL 122
Query: 312 CAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRV----SVKSS-PPGRWGHTLSSL 366
+ LVLFGG + +DDT+V + ++RR+ +V S P GR+GHT +
Sbjct: 123 NFVSDCLVLFGGGCEGGRHLDDTWVAYI---GNDFRRMLKWQTVHSGIPSGRFGHTCVEM 179
Query: 367 NGSWLVVFGGCGRQG------LLNDVFVLDLDAKQPTW--IEVSGGAPPLPRSWHSSCII 418
G +LV+FGG +G L V + + +W ++V APP R H++C I
Sbjct: 180 -GDYLVLFGGINDRGNRKNDTWLGHVMFNENNGVTFSWKMLDVGNVAPP-SRGAHAACCI 237
Query: 419 EGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPM--WREIPTSWSPPSRLGHSLSVYGRTKV 476
+ ++++ GG G+ L DT++L+++ W EI SPP R GH+L+ GR++
Sbjct: 238 DEKRMIIHGGIGLNGLRLGDTWVLEMSDSHCFGTWHEIVAHPSPPPRSGHTLTCIGRSRT 297
Query: 477 LMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVS 536
++FGG + + + +D +W Q+ + + S A V PR+ H A
Sbjct: 298 ILFGGRGLGYEVL---DDVWLLDTYQGYQRWVQIVYD----LQSIPAGVSLPRVGHTATL 350
Query: 537 MPCGRIIIFGGSIAGLHSPSQLFLLDPS 564
+ GR++I+GG + ++LD S
Sbjct: 351 VLGGRLLIYGGEDSYRQRKDDFWVLDIS 378
>gi|449460993|ref|XP_004148228.1| PREDICTED: phototropin-1-like [Cucumis sativus]
Length = 952
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 25 KCSFEGGGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRA 84
+ S EGG G LK L + T FVV+DA PD+PI+Y + F TGY +
Sbjct: 107 EMSEEGGRERGIPRVSEDLKDALSTFQQT---FVVSDATKPDYPIMYASAGFFKMTGYTS 163
Query: 85 DEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNR 144
EV+GRNCRFLQ D DP V++IR L+ G + G LLN+KKDGTP N
Sbjct: 164 KEVIGRNCRFLQGAD---------TDPEDVAKIREALQAGTSYCGRLLNYKKDGTPFWNL 214
Query: 145 LRLAPIRDDDGTVTHIIGIQI 165
L ++PI+DDDG V +IG+Q+
Sbjct: 215 LTISPIKDDDGKVLKLIGMQV 235
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 432 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDRTTVK 482
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ + +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 483 KIRDAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQL 532
>gi|222640134|gb|EEE68266.1| hypothetical protein OsJ_26492 [Oryza sativa Japonica Group]
Length = 450
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 189/432 (43%), Gaps = 70/432 (16%)
Query: 217 DEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGAL------- 269
D+VL+ IL L V S + CR ++ + + +C+ WG TG +
Sbjct: 13 DQVLS--ILHLLPAESVLSFAAACRAFHAWASSDALWEALCRRDWGARATGGVCPGPPPR 70
Query: 270 ---ELMTKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGV 326
+ + L GR AR A C R A PSR R
Sbjct: 71 RRRRAVAEDLRRGRPAR------ARCPR------AGSPSRAPRRGRGRRTRSTSSPAGSS 118
Query: 327 NM--------QPMDDTFVL-------NLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWL 371
+ + +DDT+V N +A W+++ +P GR+GH+ S+ G L
Sbjct: 119 SSAAAARELGRHLDDTWVAYVGNGAGNRSSAVFSWQQLD-SGTPSGRFGHS-CSIVGDAL 176
Query: 372 VVFGGCGRQG-LLNDVFVLDLDAKQPTWIEVS------GGAPPLPRSWHSSCIIEGSKLV 424
V+FGG QG LND ++ + ++ +++S G P PR H++C ++ +V
Sbjct: 177 VLFGGINDQGQRLNDTWIGQIICEESRRMKISWRLLEVGPHAPYPRGAHAACCVDDKFIV 236
Query: 425 VSGGCTDAGVLLSDTYLLDLTTD--KPMWREIP-TSWSPPSRLGHSLSVYGRTKVLMFGG 481
+ GG +G L DT+LLDL+ +W +I T P SR GH+L+ G +++++FGG
Sbjct: 237 IHGGIGQSGSRLGDTWLLDLSNGLRSGIWHQIEDTEPLPLSRSGHTLTWIGGSRMVLFGG 296
Query: 482 LAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGR 541
+ + + +D+ + P+WK+L+ + + +G +P PR+ H A + G+
Sbjct: 297 RGSEFDVL---NDVWLLDINERYPKWKELKYDLSSVLGE----MPFPRVGHSATLVLGGK 349
Query: 542 IIIFGGSIAGLHSPSQLFLLD-----------PSEEKPSWRILNVPGQPPKFAWGHSTCV 590
I+++GG + + LD K W+ L + GQ P + H CV
Sbjct: 350 ILVYGGEDSQRRRKDDFWTLDLPALLQFESGSKKMTKRMWKKLRIDGQCPNYRSFHGACV 409
Query: 591 -VGGTRVLVLGG 601
G V + GG
Sbjct: 410 DTSGCHVYIFGG 421
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 397 TWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPT 456
+W ++ G P R HS C I G LV+ GG D G L+DT++ + ++ R +
Sbjct: 152 SWQQLDSGTPS-GRFGHS-CSIVGDALVLFGGINDQGQRLNDTWIGQIICEES--RRMKI 207
Query: 457 SW--------SPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDL--GDEEPQ 506
SW +P R H+ +++ GG+ +SG R G+++ +DL G
Sbjct: 208 SWRLLEVGPHAPYPRGAHAACCVDDKFIVIHGGIGQSGS---RLGDTWLLDLSNGLRSGI 264
Query: 507 WKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEE 566
W Q+E + +P R H + R+++FGG + + ++LLD +E
Sbjct: 265 WHQIE---------DTEPLPLSRSGHTLTWIGGSRMVLFGGRGSEFDVLNDVWLLDINER 315
Query: 567 KPSWRIL-----NVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEE 606
P W+ L +V G+ P GHS +V G ++LV GG +
Sbjct: 316 YPKWKELKYDLSSVLGEMPFPRVGHSATLVLGGKILVYGGEDSQR 360
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 20/140 (14%)
Query: 315 GNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSS------PPGRWGHTLSSLNG 368
G+R+VLFGG G ++D ++L+++ P+W+ + S P R GH+ + + G
Sbjct: 288 GSRMVLFGGRGSEFDVLNDVWLLDINERYPKWKELKYDLSSVLGEMPFPRVGHSATLVLG 347
Query: 369 SWLVVFGGCGRQGLLNDVF-VLDLDA-----------KQPTWIEVS-GGAPPLPRSWHSS 415
++V+GG Q D F LDL A + W ++ G P RS+H +
Sbjct: 348 GKILVYGGEDSQRRRKDDFWTLDLPALLQFESGSKKMTKRMWKKLRIDGQCPNYRSFHGA 407
Query: 416 CI-IEGSKLVVSGGCTDAGV 434
C+ G + + GG D V
Sbjct: 408 CVDTSGCHVYIFGGMVDGLV 427
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 21/169 (12%)
Query: 451 WREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQ---- 506
W+++ + +P R GHS S+ G VL FGG+ G R +++ + EE +
Sbjct: 153 WQQLDSG-TPSGRFGHSCSIVGDALVL-FGGINDQGQ---RLNDTWIGQIICEESRRMKI 207
Query: 507 -WKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSE 565
W+ LE VG + P PR H A + I+I GG +LLD S
Sbjct: 208 SWRLLE------VGPHA---PYPRGAHAACCVDDKFIVIHGGIGQSGSRLGDTWLLDLSN 258
Query: 566 EKPS--WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEL 612
S W + P GH+ +GG+R+++ GG E VLN++
Sbjct: 259 GLRSGIWHQIEDTEPLPLSRSGHTLTWIGGSRMVLFGGRGSEFDVLNDV 307
>gi|356526302|ref|XP_003531757.1| PREDICTED: F-box/kelch-repeat protein At1g51550-like [Glycine max]
Length = 459
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 167/357 (46%), Gaps = 43/357 (12%)
Query: 228 LTPRD-VASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGAL-----ELMTKKLGWGRL 281
L P D + S+ C+R R L+ + + + +C+ +G +L W RL
Sbjct: 40 LLPIDAILSLSMTCKRFRALSSSHTLWRSLCKRDFGSTCVDSLLNSSNNNQHHHFPWMRL 99
Query: 282 ARELTTLEAVCWRKFTVRGAVEPS-RCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLD 340
++++ +++VC K V P+ R + S + LVLFGG + +DDT+V +
Sbjct: 100 YKQVSLMDSVCCHKLLVSDLDFPAARASHSLNFVSDCLVLFGGGCEGGRHLDDTWVAYI- 158
Query: 341 AANPEWRRV----SVKSS-PPGRWGHTLSSLNGSWLVVFGGCGRQG------LLNDVFVL 389
++RR+ +V S P GR+GHT + G LV+FGG +G L V
Sbjct: 159 --GNDFRRMLKWQTVHSGIPSGRFGHTCVEM-GDCLVLFGGIDDRGNRQNDTWLGHVMFS 215
Query: 390 DLDAKQPTW--IEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD 447
+ + +W + V APP PR H++C I+ ++++ GG G+ L DT
Sbjct: 216 ENNGVTFSWKMLAVGNVAPP-PRGAHAACSIDEKRMIIHGGIGLNGLRLGDT-------- 266
Query: 448 KPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW 507
W EI + SPP R GH+L+ GR++ ++FGG + + + +D +W
Sbjct: 267 ---WHEIVSHPSPPPRSGHTLTCIGRSRTILFGGRGLGYEVL---DDVWLLDTYQGYQKW 320
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPS 564
Q+ + + S V PR+ H A + GR++I+GG + H ++LD S
Sbjct: 321 VQIVYD----LQSIPDGVSLPRVGHTATLVLGGRLLIYGGENSYRHRKDDFWVLDIS 373
>gi|356542583|ref|XP_003539746.1| PREDICTED: phototropin-1-like [Glycine max]
Length = 977
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 71/110 (64%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI+Y + F TGY + EV+GRNCRF+Q D DP V+
Sbjct: 178 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFMQGAD---------TDPDDVA 228
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR L+ G + G LLN+KKDGTP N L +API+DDDG V IG+Q+
Sbjct: 229 KIREALQSGSTYCGRLLNYKKDGTPFWNLLTIAPIKDDDGRVLKFIGMQV 278
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V
Sbjct: 459 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVR 509
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ + +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 510 KIREAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQL 559
>gi|76800979|ref|YP_325987.1| bacterio-opsin activator [Natronomonas pharaonis DSM 2160]
gi|76556844|emb|CAI48418.1| receiver/sensor/bat box HTH-10 family transcription regulator Bat
(homolog to bacterioopsin activator) [Natronomonas
pharaonis DSM 2160]
Length = 681
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 70/112 (62%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
P VVAD + D P++Y+N+ FE TGY EVLGRNCRFLQ D +P
Sbjct: 155 APVGVVVADPHEEDEPLVYINEAFERLTGYERHEVLGRNCRFLQGED---------TNPE 205
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ IR+ +++ ELLN++KDG P N+L +APIRDDDG VTH++G Q
Sbjct: 206 AVATIRQAVDDRRPVSVELLNYRKDGEPFWNQLNIAPIRDDDGRVTHLVGFQ 257
>gi|334117232|ref|ZP_08491324.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Microcoleus vaginatus FGP-2]
gi|333462052|gb|EGK90657.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Microcoleus vaginatus FGP-2]
Length = 1024
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 80/150 (53%), Gaps = 11/150 (7%)
Query: 17 IQGSGKRQKCSFEGGGGGGGDDTELSLKPGLLFYPTTPTS--FVVADAFDPDFPIIYVNK 74
+ G + Q S G GG GD S L TS V+ADA PD PIIY N
Sbjct: 22 LMGDRENQSISNLGEVGGAGDRHTASEALWLCDRALAATSSGIVIADANAPDCPIIYCNP 81
Query: 75 VFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNF 134
FE TGY A E+LGRNCRFLQ P D V+ IR L +G E Q + N+
Sbjct: 82 AFERMTGYCASEILGRNCRFLQ---------GPDTDRTTVANIRDALRQGREIQTTIKNY 132
Query: 135 KKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+KDG+P ++L L+P+RDD +TH +GIQ
Sbjct: 133 RKDGSPFWSKLSLSPVRDDSANLTHFVGIQ 162
>gi|357454021|ref|XP_003597291.1| Phototropin [Medicago truncatula]
gi|355486339|gb|AES67542.1| Phototropin [Medicago truncatula]
Length = 1053
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 83/147 (56%), Gaps = 12/147 (8%)
Query: 19 GSGKRQKCSFEGGGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEI 78
SG+ S +GG G LK L + T FVV+DA PD+PI+Y + F
Sbjct: 124 NSGRVSGDSSDGGDPRGFPRVSEDLKDALSAFQQT---FVVSDATKPDYPIMYASAGFFN 180
Query: 79 FTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDG 138
TGY + EV+GRNCRFLQ D DP V++IR LE G + G LLN+KKDG
Sbjct: 181 MTGYTSKEVIGRNCRFLQGAD---------TDPQDVAKIREALEGGKSYCGRLLNYKKDG 231
Query: 139 TPLVNRLRLAPIRDDDGTVTHIIGIQI 165
TP N L ++PI+DDDG V +IG+ +
Sbjct: 232 TPFWNLLTISPIKDDDGNVLKLIGMLV 258
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V
Sbjct: 441 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVR 491
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ + G N L P+RD G V + IG+Q+
Sbjct: 492 KIREAIDNQTEVTVQLINYTRTGKKFWNLFHLQPMRDHKGEVQYFIGVQL 541
>gi|24899170|dbj|BAC23099.1| phototropin [Vicia faba]
Length = 970
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 86/158 (54%), Gaps = 16/158 (10%)
Query: 8 EEEEEGEGVIQGSGKRQKCSFEGGGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDF 67
E + ++ SG+ S +GG G LK L + T FVV+DA PD+
Sbjct: 120 ESKRNSNNTVRTSGE----SSDGGDPRGFPRVSDDLKDALSAFQQT---FVVSDATKPDY 172
Query: 68 PIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEF 127
PI+Y + F TGY + EV+GRNCRFLQ D DP V+ IR LE G F
Sbjct: 173 PILYASAGFFKMTGYTSKEVIGRNCRFLQGAD---------TDPNDVARIREALEGGKSF 223
Query: 128 QGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
G LLN+KKDGTP N L ++PI+DDDG V +IG+ +
Sbjct: 224 CGRLLNYKKDGTPFWNLLTISPIKDDDGNVLKLIGMLV 261
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LG+NCRFLQ ++ DP V
Sbjct: 443 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGKNCRFLQGQE---------TDPATVR 493
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 494 KIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDHKGEVQYFIGVQL 543
>gi|350551714|ref|ZP_08920927.1| PAS/PAC sensor hybrid histidine kinase [Thiorhodospira sibirica
ATCC 700588]
gi|349796852|gb|EGZ50635.1| PAS/PAC sensor hybrid histidine kinase [Thiorhodospira sibirica
ATCC 700588]
Length = 1042
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 71/111 (63%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P S +ADA DP+ P++Y+N+ FE TGYR +E+LG+NCRFLQ D +
Sbjct: 150 PDSIAIADASDPEMPLVYINQAFEQLTGYRREEILGKNCRFLQADD---------TEQTA 200
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ +R+ L EG + L N++KDGTP N+L + P+R++ GT+TH +GIQ
Sbjct: 201 LDVLRQALHEGKPSKTLLRNYRKDGTPFWNQLSITPVRNETGTITHFVGIQ 251
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+ V+ D I YVN+ F +GY A E+LG+N R LQ + +
Sbjct: 27 AHVLVSITDAAGTITYVNQRFCETSGYAAAEILGQNHRCLQSGQHAKE---------FYA 77
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNH 175
++ + G+ +QGEL N +DG L + + P R+ +TH I + D++H
Sbjct: 78 QLWADISSGVIWQGELCNRHRDGALLWLQTTIVPRRNAQQNITHYIAL------STDVSH 131
Query: 176 VSYPVFKENCNQQ 188
+ +C ++
Sbjct: 132 IRRSEATLSCQRR 144
>gi|12040650|gb|AAB41023.2| phototropin-like protein PsPK4 [Pisum sativum]
Length = 976
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 70/110 (63%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI+Y + F TGY + EV+GRNCRFLQ D DP V+
Sbjct: 166 TFVVSDATKPDYPILYASAGFFKMTGYTSKEVIGRNCRFLQGAD---------TDPDDVA 216
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR LE G F G LLN+KKDGTP N L ++PI+DDDG V +IG+ +
Sbjct: 217 RIREALEGGKSFCGRLLNYKKDGTPFWNLLTISPIKDDDGNVLKLIGMLV 266
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LG+NCRFLQ P DP V
Sbjct: 449 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGKNCRFLQ---------GPETDPATVR 499
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 500 KIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDHKGEVQYFIGVQL 549
>gi|302764126|ref|XP_002965484.1| hypothetical protein SELMODRAFT_230655 [Selaginella moellendorffii]
gi|300166298|gb|EFJ32904.1| hypothetical protein SELMODRAFT_230655 [Selaginella moellendorffii]
Length = 952
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 75/121 (61%), Gaps = 13/121 (10%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV DA DP+ PI+Y + F TGY A EV+GRNCRFLQ + DPV VS
Sbjct: 195 TFVVCDATDPELPILYASAGFFSMTGYTAKEVIGRNCRFLQGTE---------TDPVDVS 245
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI----FSEAKI 171
+IR LE+G F G LLN+KK+GTP N L +API+D+DG V IG+ + F+E
Sbjct: 246 KIRVALEQGKSFCGRLLNYKKNGTPFWNLLTIAPIKDEDGKVLKYIGMLVEVSQFTEGSK 305
Query: 172 D 172
D
Sbjct: 306 D 306
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LG+NCRFLQ P + V+
Sbjct: 435 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGKNCRFLQ---------GPDTNQETVT 485
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNH 175
IR + + +LLN+ K G P N L P+RD+ G + + IG+Q+ D
Sbjct: 486 RIRYAIRDQKSITVQLLNYTKRGKPFWNLFHLQPMRDNKGELQYFIGVQLDGSQHFDKVR 545
Query: 176 VSYPVFKENCNQQYDQSA 193
P E+ Q QSA
Sbjct: 546 KGLPDKVEHEGVQVIQSA 563
>gi|20338415|gb|AAM15725.1| phototropin 1 [Pisum sativum]
Length = 976
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 70/110 (63%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI+Y + F TGY + EV+GRNCRFLQ D DP V+
Sbjct: 166 TFVVSDATKPDYPILYASAGFFKMTGYTSKEVIGRNCRFLQGAD---------TDPDDVA 216
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR LE G F G LLN+KKDGTP N L ++PI+DDDG V +IG+ +
Sbjct: 217 RIREALEGGKSFCGRLLNYKKDGTPFWNLLTISPIKDDDGNVLKLIGMLV 266
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LG+NCRFLQ P DP V
Sbjct: 449 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGKNCRFLQ---------GPETDPATVR 499
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 500 KIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDHKGEVQYFIGVQL 549
>gi|356558407|ref|XP_003547498.1| PREDICTED: phototropin-1-like [Glycine max]
Length = 978
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 71/110 (64%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI+Y + F TGY + EV+GRNCRFLQ D DP V+
Sbjct: 166 TFVVSDATKPDYPILYASAGFFKMTGYTSKEVIGRNCRFLQGAD---------TDPEDVA 216
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR L+ G + G LLN+KKDGTP N L ++PI+D+DG V IG+Q+
Sbjct: 217 KIREALQSGKIYCGRLLNYKKDGTPFWNLLTISPIKDEDGKVLKFIGMQV 266
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V
Sbjct: 460 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVR 510
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 511 KIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQL 560
>gi|386335262|ref|YP_006031432.1| hypothetical protein RSPO_m00255 [Ralstonia solanacearum Po82]
gi|334197712|gb|AEG70896.1| conserved hypothetical protein [Ralstonia solanacearum Po82]
Length = 1234
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ P+ VADA PD P++YVN FE TGYRA+EVLGRNCRFL +P
Sbjct: 688 SVPSGISVADALQPDLPLVYVNPGFERMTGYRAEEVLGRNCRFLHSSEP---------GQ 738
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+R L + E + L NF+KDG P +N L+P+RD G VTH +GIQ
Sbjct: 739 PALNEVRTALRDASEIRVLLRNFRKDGHPFLNNFLLSPVRDSRGAVTHYVGIQ 791
>gi|83748362|ref|ZP_00945386.1| Hypothetical Protein RRSL_01709 [Ralstonia solanacearum UW551]
gi|83724984|gb|EAP72138.1| Hypothetical Protein RRSL_01709 [Ralstonia solanacearum UW551]
Length = 1234
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ P+ VADA PD P++YVN FE TGYRA+EVLGRNCRFL +P
Sbjct: 688 SVPSGISVADALQPDLPLVYVNPGFERMTGYRAEEVLGRNCRFLHSSEP---------GQ 738
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+R L + E + L NF+KDG P +N L+P+RD G VTH +GIQ
Sbjct: 739 PALNEVRTALRDASEIRVLLRNFRKDGHPFLNNFLLSPVRDSRGAVTHYVGIQ 791
>gi|421896285|ref|ZP_16326682.1| signal transduction protein eal-ggdef domains [Ralstonia
solanacearum MolK2]
gi|206587450|emb|CAQ18032.1| signal transduction protein eal-ggdef domains [Ralstonia
solanacearum MolK2]
Length = 1178
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ P+ VADA PD P++YVN FE TGYRA+EVLGRNCRFL +P
Sbjct: 632 SVPSGISVADALQPDLPLVYVNPGFERMTGYRAEEVLGRNCRFLHSSEP---------GQ 682
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+R L + E + L NF+KDG P +N L+P+RD G VTH +GIQ
Sbjct: 683 PALNEVRTALRDASEIRVLLRNFRKDGHPFLNNFLLSPVRDSRGAVTHYVGIQ 735
>gi|300696801|ref|YP_003747462.1| putative signal transduction eal-ggdef domains transmembrane
protein [Ralstonia solanacearum CFBP2957]
gi|299073525|emb|CBJ53045.1| putative signal transduction eal-ggdef domains transmembrane
protein [Ralstonia solanacearum CFBP2957]
Length = 1178
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ P+ VADA PD P++YVN FE TGYRA+EVLGRNCRFL +P
Sbjct: 632 SVPSGISVADALQPDLPLVYVNPGFERMTGYRAEEVLGRNCRFLHSSEP---------GQ 682
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+R L + E + L NF+KDG P +N L+P+RD G VTH +GIQ
Sbjct: 683 PALNEVRTALRDASEIRVLLRNFRKDGHPFLNNFLLSPVRDSRGAVTHYVGIQ 735
>gi|207738819|ref|YP_002257212.1| signal transduction protein eal-ggdef domains [Ralstonia
solanacearum IPO1609]
gi|206592187|emb|CAQ59093.1| signal transduction protein eal-ggdef domains [Ralstonia
solanacearum IPO1609]
Length = 1178
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ P+ VADA PD P++YVN FE TGYRA+EVLGRNCRFL +P
Sbjct: 632 SVPSGISVADALQPDLPLVYVNPGFERMTGYRAEEVLGRNCRFLHSSEP---------GQ 682
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+R L + E + L NF+KDG P +N L+P+RD G VTH +GIQ
Sbjct: 683 PALNEVRTALRDASEIRVLLRNFRKDGHPFLNNFLLSPVRDSRGAVTHYVGIQ 735
>gi|242082458|ref|XP_002441654.1| hypothetical protein SORBIDRAFT_08g000260 [Sorghum bicolor]
gi|241942347|gb|EES15492.1| hypothetical protein SORBIDRAFT_08g000260 [Sorghum bicolor]
Length = 913
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 72/110 (65%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI+Y + F TGY ++EV+GRNCRFLQ DPV +S
Sbjct: 128 TFVVSDATRPDYPILYASAGFFNMTGYSSNEVVGRNCRFLQGSG---------TDPVEIS 178
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR+ L G + G +LN+KKDGTP N L +API+D+DG V IG+Q+
Sbjct: 179 KIRQALAAGSNYCGRILNYKKDGTPFWNLLTVAPIKDEDGRVLKFIGMQV 228
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 404 NFVITDPRLPDNPIIFASDSFLRLTEYCREEILGRNCRFLQ---------GPETDRGTVK 454
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 455 KIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQL 504
>gi|375152312|gb|AFA36614.1| putative F-box protein, partial [Lolium perenne]
Length = 266
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 128/258 (49%), Gaps = 29/258 (11%)
Query: 354 SPPGRWGHTLSSLNGSWLVVFGGCGRQGL-LNDVFVLDLDAKQPTWIEVS------GGAP 406
+P GR+GH+ +L G LV+FGG +GL LND ++ + +++P + +S G
Sbjct: 10 TPNGRFGHS-CTLVGDALVMFGGINDRGLRLNDTWIGQIISEEPCKMRISWRLLEVGPIT 68
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD--KPMWREIP-TSWSPPSR 463
P PR H++C ++ +++ GG G L DT+LLDL+ WR++ T SP R
Sbjct: 69 PSPRGAHAACCLDDKFIMIHGGIGVHGSRLGDTWLLDLSDGLRSGSWRQMEDTGPSPSPR 128
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSA 523
GH+L+ G T +++FGG + + + D+GD PQWK+L+C+ + +G
Sbjct: 129 SGHTLTWIGETHLVLFGGRGSEYDVL---NDVWLFDIGDHLPQWKELKCDLSSILGE--- 182
Query: 524 VVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD-----------PSEEKPSWRI 572
+P PR+ H A + G+I+++GG + + LD K W+
Sbjct: 183 -LPSPRVGHSATLVLGGKILVYGGEDSQRRRMDDFWTLDLPALRQFQSGSRKMAKRMWKK 241
Query: 573 LNVPGQPPKFAWGHSTCV 590
L GQ P H CV
Sbjct: 242 LRTDGQSPHCRSFHGACV 259
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 21/226 (9%)
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP-----E 345
+CW++F R S G+ LV+FGG ++DT++ + + P
Sbjct: 1 LCWQQFP--SGTPNGRFGHSCTLVGDALVMFGGINDRGLRLNDTWIGQIISEEPCKMRIS 58
Query: 346 WRRVSVKS-SPPGRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLDLD--AKQPTWIEV 401
WR + V +P R H L+ ++++ GG G G L D ++LDL + +W ++
Sbjct: 59 WRLLEVGPITPSPRGAHAACCLDDKFIMIHGGIGVHGSRLGDTWLLDLSDGLRSGSWRQM 118
Query: 402 SGGAP-PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS- 459
P P PRS H+ I + LV+ GG +L+D +L D+ P W+E+ S
Sbjct: 119 EDTGPSPSPRSGHTLTWIGETHLVLFGGRGSEYDVLNDVWLFDIGDHLPQWKELKCDLSS 178
Query: 460 -----PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDL 500
P R+GHS ++ K+L++GG R R + +T+DL
Sbjct: 179 ILGELPSPRVGHSATLVLGGKILVYGGEDSQ---RRRMDDFWTLDL 221
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 29/220 (13%)
Query: 415 SCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSW--------SPPSRLGH 466
SC + G LV+ GG D G+ L+DT++ + +++P ++ SW +P R H
Sbjct: 18 SCTLVGDALVMFGGINDRGLRLNDTWIGQIISEEPC--KMRISWRLLEVGPITPSPRGAH 75
Query: 467 SLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD--EEPQWKQLECNAFTGVGSQSAV 524
+ +++ GG+ G R G+++ +DL D W+Q+E +
Sbjct: 76 AACCLDDKFIMIHGGIGVHGS---RLGDTWLLDLSDGLRSGSWRQME---------DTGP 123
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRIL-----NVPGQP 579
P PR H + +++FGG + + ++L D + P W+ L ++ G+
Sbjct: 124 SPSPRSGHTLTWIGETHLVLFGGRGSEYDVLNDVWLFDIGDHLPQWKELKCDLSSILGEL 183
Query: 580 PKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
P GHS +V G ++LV GG + +++ L L +
Sbjct: 184 PSPRVGHSATLVLGGKILVYGGEDSQRRRMDDFWTLDLPA 223
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 451 WREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEP----- 505
W++ P+ +P R GHS ++ G ++MFGG+ G LR +++ + EEP
Sbjct: 3 WQQFPSG-TPNGRFGHSCTLVG-DALVMFGGINDRG---LRLNDTWIGQIISEEPCKMRI 57
Query: 506 QWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSP--SQLFLLDP 563
W+ LE T P PR H A + I+I GG G+H +LLD
Sbjct: 58 SWRLLEVGPIT---------PSPRGAHAACCLDDKFIMIHGG--IGVHGSRLGDTWLLDL 106
Query: 564 SE--EKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEL 612
S+ SWR + G P GH+ +G T +++ GG E VLN++
Sbjct: 107 SDGLRSGSWRQMEDTGPSPSPRSGHTLTWIGETHLVLFGGRGSEYDVLNDV 157
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 20/173 (11%)
Query: 265 VTGALELMTKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAG-NRLVLFGG 323
+ G + + +LG L L + WR+ G R + G LVLFGG
Sbjct: 87 IHGGIGVHGSRLGDTWLLDLSDGLRSGSWRQMEDTGPSPSPRSGHTLTWIGETHLVLFGG 146
Query: 324 EGVNMQPMDDTFVLNLDAANPEWRRVSVKSS------PPGRWGHTLSSLNGSWLVVFGGC 377
G ++D ++ ++ P+W+ + S P R GH+ + + G ++V+GG
Sbjct: 147 RGSEYDVLNDVWLFDIGDHLPQWKELKCDLSSILGELPSPRVGHSATLVLGGKILVYGGE 206
Query: 378 GRQ-GLLNDVFVLDLDA-----------KQPTWIEV-SGGAPPLPRSWHSSCI 417
Q ++D + LDL A + W ++ + G P RS+H +C+
Sbjct: 207 DSQRRRMDDFWTLDLPALRQFQSGSRKMAKRMWKKLRTDGQSPHCRSFHGACV 259
>gi|60099454|dbj|BAD89966.1| phototropin [Phaseolus vulgaris]
Length = 976
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 85/165 (51%), Gaps = 21/165 (12%)
Query: 10 EEEGEGVIQGSGKRQKCSFEGGGGGGGDDTEL---------SLKPGLLFYPTTPTSFVVA 60
EE G V GS + S G D E L+ L + T FVV+
Sbjct: 127 EEPGVKVTGGSRRDSGNSVRSSGESSDDGREYRGGIPRVSEDLRDALSAFQQT---FVVS 183
Query: 61 DAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRC 120
DA PD+PI+Y + F TGY + EV+GRNCRF+Q D DP V++IR
Sbjct: 184 DATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFMQGAD---------TDPDDVAKIREA 234
Query: 121 LEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
L+ G + G LLN+KKDGTP N L +API+D DG V IG+Q+
Sbjct: 235 LQTGQTYCGRLLNYKKDGTPFWNLLTIAPIKDHDGRVLKFIGMQV 279
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 14 EGVIQGSGKRQKCSFEGGGGGGGDDTELSLKPGLLFYPT---TPTSFVVADAFDPDFPII 70
E VI+GS + E G G + GL T +FV+ D PD PII
Sbjct: 414 EAVIEGSSESSDEDGERSGSFDGKVQRKEKRKGLDLATTLERIEKNFVITDPRLPDNPII 473
Query: 71 YVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGE 130
+ + F T Y +E+LGRNCRFLQ P DP V +IR ++ + +
Sbjct: 474 FASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVRKIREAIDTQTDVTVQ 524
Query: 131 LLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 525 LINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQL 559
>gi|168067656|ref|XP_001785726.1| PHOTB2 phototropin B2 blue light photoreceptor [Physcomitrella
patens subsp. patens]
gi|50510317|dbj|BAD32625.1| phototropin [Physcomitrella patens]
gi|162662632|gb|EDQ49461.1| PHOTB2 phototropin B2 blue light photoreceptor [Physcomitrella
patens subsp. patens]
Length = 1171
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PDFPI+Y + F TGY EV+GRNCRFLQ P DP V+
Sbjct: 349 TFVVSDATQPDFPILYASAGFFNMTGYTPKEVIGRNCRFLQ---------GPGTDPEDVT 399
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR L+EG F G LLN+KKDG+ N L + PI+DDDG V IG+Q+
Sbjct: 400 RIRDALKEGRSFCGRLLNYKKDGSAFWNLLTITPIKDDDGKVLKFIGMQV 449
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D VV
Sbjct: 640 NFVITDPRLPDNPIIFASDEFLELTEYTREEILGRNCRFLQ---------GPDTDRAVVD 690
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + + +LLN+ K G P N L +RD +G + + IG+Q+
Sbjct: 691 QIRDAIAARRDITVQLLNYTKSGKPFWNLFHLQAMRDHNGELQYFIGVQL 740
>gi|357472521|ref|XP_003606545.1| Phototropin [Medicago truncatula]
gi|355507600|gb|AES88742.1| Phototropin [Medicago truncatula]
Length = 940
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI+Y + F TGY + EV+GRNCRF+Q D DP V+
Sbjct: 165 TFVVSDATKPDYPIMYASAGFFNMTGYTSKEVIGRNCRFMQGAD---------TDPNDVA 215
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR L G + G LLN+KKDGTP N L +API+D++G + +IG+Q+
Sbjct: 216 KIRESLAAGTTYCGRLLNYKKDGTPFWNLLTIAPIKDENGKILKLIGMQV 265
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V
Sbjct: 459 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVK 509
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR+ ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 510 KIRQAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQL 559
>gi|302802410|ref|XP_002982959.1| hypothetical protein SELMODRAFT_10296 [Selaginella moellendorffii]
gi|300149112|gb|EFJ15768.1| hypothetical protein SELMODRAFT_10296 [Selaginella moellendorffii]
Length = 824
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 74/121 (61%), Gaps = 13/121 (10%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV DA DP+ PI+Y + F TGY A EV+GRNCRFLQ + DP VS
Sbjct: 82 TFVVCDATDPELPILYASAGFFSMTGYTAKEVIGRNCRFLQGTE---------TDPADVS 132
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI----FSEAKI 171
+IR LE+G F G LLN+KK+GTP N L +API+D+DG V IG+ + F+E
Sbjct: 133 KIRVALEQGKSFCGRLLNYKKNGTPFWNLLTIAPIKDEDGKVLKYIGMLVEVSQFTEGSK 192
Query: 172 D 172
D
Sbjct: 193 D 193
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LG+NCRFLQ D + V+
Sbjct: 322 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGKNCRFLQGPDTNQE---------TVT 372
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNH 175
IR + + +LLN+ K G P N L P+RD+ G + + IG+Q+ D
Sbjct: 373 RIRYAIRDQRSITVQLLNYTKRGKPFWNLFHLQPMRDNKGELQYFIGVQLDGSQHFDKVR 432
Query: 176 VSYPVFKENCNQQYDQSA 193
P E+ Q QSA
Sbjct: 433 KGLPDKVEHEGVQVIQSA 450
>gi|428316459|ref|YP_007114341.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Oscillatoria nigro-viridis PCC 7112]
gi|428240139|gb|AFZ05925.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Oscillatoria nigro-viridis PCC 7112]
Length = 1003
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Query: 19 GSGKRQKCSFEGGGGGGGDDTELSLKPGLLFYPTTPTS--FVVADAFDPDFPIIYVNKVF 76
G + Q S G GG GD S L TS V+ADA PD PIIY N F
Sbjct: 2 GDRENQSISNLGEVGGVGDRHTASEALWLRDRALAATSCGIVIADANAPDCPIIYCNPAF 61
Query: 77 EIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKK 136
E TGY A E+LGRNCRFLQ P D V++IR L +G Q + N++K
Sbjct: 62 ERMTGYCASEILGRNCRFLQ---------GPDTDRTTVAKIREALRQGRAIQTPIKNYRK 112
Query: 137 DGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
DGTP +L L+P+RDD +TH +G+Q
Sbjct: 113 DGTPFWTKLSLSPVRDDKANLTHFVGVQ 140
>gi|356550222|ref|XP_003543487.1| PREDICTED: phototropin-1-like [Glycine max]
Length = 982
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 71/110 (64%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA D+PI+Y + F TGY++ EV+GRNCRFLQ D DP V+
Sbjct: 168 TFVVSDATKADYPILYASAGFFKMTGYKSKEVIGRNCRFLQGAD---------TDPEDVA 218
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR L+ G + G LLN+KKDGTP N L ++PI+D+DG V IG+Q+
Sbjct: 219 KIREALQAGKIYCGRLLNYKKDGTPFWNLLTISPIKDEDGKVLKFIGMQV 268
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V+
Sbjct: 460 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVN 510
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 511 KIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQL 560
>gi|302819840|ref|XP_002991589.1| hypothetical protein SELMODRAFT_186203 [Selaginella moellendorffii]
gi|300140622|gb|EFJ07343.1| hypothetical protein SELMODRAFT_186203 [Selaginella moellendorffii]
Length = 926
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 71/114 (62%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA D+PI+Y + F TGY + EV+GRNCRFLQ DP
Sbjct: 146 TFQQTFVVSDATKADYPILYASAGFYNMTGYTSKEVIGRNCRFLQGSG---------TDP 196
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+ VS+IR L EG F G LLN+KKDGTP N L +API+D++G + IG+Q+
Sbjct: 197 IDVSKIRDALREGESFCGRLLNYKKDGTPFWNLLTIAPIKDENGKILKYIGMQV 250
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ D V
Sbjct: 411 NFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGAG---------TDVETVK 461
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++E + +LLN+ K G P N L ++D+ G + + IG+Q+
Sbjct: 462 KIRDAIKEQRDITVQLLNYTKSGKPFWNLFHLQAMKDNQGELQYFIGVQL 511
>gi|344167377|emb|CCA79599.1| putative signal transduction eal-ggdef domains transmembrane
protein [blood disease bacterium R229]
Length = 1178
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ P+ VADA PD P++YVN FE TGYRA+EVLGRNCRFL +P
Sbjct: 632 SVPSGITVADALQPDLPLVYVNPGFERMTGYRAEEVLGRNCRFLHSSEP---------GQ 682
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+R L + E + L NF+KDG +N L+P+RD G VTH +GIQ
Sbjct: 683 PALNEVRAALRDASEIRVLLRNFRKDGHSFLNNFLLSPVRDSQGAVTHYVGIQ 735
>gi|302779868|ref|XP_002971709.1| hypothetical protein SELMODRAFT_172224 [Selaginella moellendorffii]
gi|300160841|gb|EFJ27458.1| hypothetical protein SELMODRAFT_172224 [Selaginella moellendorffii]
Length = 930
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 71/114 (62%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA D+PI+Y + F TGY + EV+GRNCRFLQ DP
Sbjct: 146 TFQQTFVVSDATKADYPILYASAGFYNMTGYTSKEVIGRNCRFLQGSG---------TDP 196
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+ VS+IR L EG F G LLN+KKDGTP N L +API+D++G + IG+Q+
Sbjct: 197 IDVSKIRDALREGQSFCGRLLNYKKDGTPFWNLLTIAPIKDENGKILKYIGMQV 250
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ D V
Sbjct: 411 NFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGAG---------TDVETVK 461
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E + +LLN+ K G P N L ++D+ G + + IG+Q+
Sbjct: 462 KIRDAIREQRDITVQLLNYTKSGKPFWNLFHLQAMKDNKGELQYFIGVQL 511
>gi|300693249|ref|YP_003749222.1| signal transduction eal-ggdef domains transmembrane protein
[Ralstonia solanacearum PSI07]
gi|299075286|emb|CBJ34576.1| putative signal transduction eal-ggdef domains transmembrane
protein [Ralstonia solanacearum PSI07]
Length = 1178
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ P+ VADA PD P++YVN FE TGYRA+EVLGRNCRFL +P
Sbjct: 632 SVPSGITVADALQPDLPLVYVNPGFERMTGYRAEEVLGRNCRFLHSSEP---------GQ 682
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+R L + E + L NF+KDG +N L+P+RD G VTH +GIQ
Sbjct: 683 PALNEVRAALRDASEIRVLLRNFRKDGHSFLNNFLLSPVRDSQGAVTHYVGIQ 735
>gi|344174907|emb|CCA87536.1| putative signal transduction eal-ggdef domains transmembrane
protein [Ralstonia syzygii R24]
Length = 1178
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ P+ VADA PD P++YVN FE TGYRA+EVLGRNCRFL +P
Sbjct: 632 SVPSGITVADALQPDLPLVYVNPGFERMTGYRAEEVLGRNCRFLHSSEP---------GQ 682
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+R L + E + L NF+KDG +N L+P+RD G VTH +GIQ
Sbjct: 683 PALNEVRAALRDASEIRVLLRNFRKDGHSFLNNFLLSPVRDSQGAVTHYVGIQ 735
>gi|162457815|ref|NP_001104886.1| blue-light receptor phototropin 1 [Zea mays]
gi|2687358|gb|AAB88817.1| nonphototropic hypocotyl 1 [Zea mays]
Length = 911
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 71/110 (64%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD PI+Y + F TGY ++EV+GRNCRFLQ DPV +S
Sbjct: 128 TFVVSDATRPDHPILYASAGFFNMTGYSSNEVVGRNCRFLQGSG---------TDPVEIS 178
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR+ L G + G +LN+KKDGTP N L +API+D+DG V IG+Q+
Sbjct: 179 KIRQALAAGSNYCGRILNYKKDGTPFWNLLTVAPIKDEDGRVLKFIGMQV 228
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 402 NFVITDPRLPDNPIIFASDSFLRLTEYCREEILGRNCRFLQ---------GPETDRGTVK 452
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 453 KIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 502
>gi|291295643|ref|YP_003507041.1| PAS/PAC sensor signal transduction histidine kinase [Meiothermus
ruber DSM 1279]
gi|290470602|gb|ADD28021.1| PAS/PAC sensor signal transduction histidine kinase [Meiothermus
ruber DSM 1279]
Length = 578
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 9/121 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T V+ DA PD+PI+Y N F TGY ++EVLGRNCRFLQ P +P
Sbjct: 12 TILAGVVITDAQLPDYPIVYCNPGFVQLTGYPSEEVLGRNCRFLQ---------GPATNP 62
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
V+ +RR + EG LLN++KDG P N LR+AP+RD +G +TH +GIQ AK+
Sbjct: 63 ETVARLRRAIHEGRPAHVLLLNYRKDGQPFWNDLRIAPVRDVEGRLTHFVGIQSDVSAKV 122
Query: 172 D 172
+
Sbjct: 123 E 123
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
DP I +N F+ TG++ +E LG++ LQ + P V SEIR+ L
Sbjct: 252 DPSGLIESLNNAFQAKTGWQEEEALGKDIFTLQA-----------IPPEVASEIRQTLGA 300
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G + G ++ G + ++P+RD G + ++ IQ
Sbjct: 301 GRVWSGSYQACRRTGEVYLAEATISPVRDLKGRIVKLVHIQ 341
>gi|225435157|ref|XP_002281752.1| PREDICTED: phototropin-1-like [Vitis vinifera]
Length = 1004
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 80/151 (52%), Gaps = 16/151 (10%)
Query: 19 GSGKRQKCSFEGGGGGGGDDT----ELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNK 74
G+ R GG G D LK L + T FVV+DA PD+PI+Y +
Sbjct: 171 GNSVRSSGEMSDEGGAGKDRAFPRVSEDLKDALSTFQQT---FVVSDATKPDYPILYASA 227
Query: 75 VFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNF 134
F TGY + EV+GRNCRFLQ DP V++IR L G + G LLN+
Sbjct: 228 GFFKMTGYTSKEVIGRNCRFLQGSG---------TDPEDVAKIREALHAGNSYCGRLLNY 278
Query: 135 KKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
KKDGTP N L ++PI+D++G V IG+Q+
Sbjct: 279 KKDGTPFWNLLTISPIKDENGNVLKFIGMQV 309
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V
Sbjct: 485 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVR 535
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNH 175
+IR ++ + +L+N+ K G N L P+RD G V + IG+Q+ ++ H
Sbjct: 536 KIREAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHVEPLH 595
Query: 176 VSYP 179
P
Sbjct: 596 NCIP 599
>gi|297746173|emb|CBI16229.3| unnamed protein product [Vitis vinifera]
Length = 958
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 80/151 (52%), Gaps = 16/151 (10%)
Query: 19 GSGKRQKCSFEGGGGGGGDDT----ELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNK 74
G+ R GG G D LK L + T FVV+DA PD+PI+Y +
Sbjct: 125 GNSVRSSGEMSDEGGAGKDRAFPRVSEDLKDALSTFQQT---FVVSDATKPDYPILYASA 181
Query: 75 VFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNF 134
F TGY + EV+GRNCRFLQ DP V++IR L G + G LLN+
Sbjct: 182 GFFKMTGYTSKEVIGRNCRFLQGSG---------TDPEDVAKIREALHAGNSYCGRLLNY 232
Query: 135 KKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
KKDGTP N L ++PI+D++G V IG+Q+
Sbjct: 233 KKDGTPFWNLLTISPIKDENGNVLKFIGMQV 263
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V
Sbjct: 439 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVR 489
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNH 175
+IR ++ + +L+N+ K G N L P+RD G V + IG+Q+ ++ H
Sbjct: 490 KIREAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHVEPLH 549
Query: 176 VSYP 179
P
Sbjct: 550 NCIP 553
>gi|410684156|ref|YP_006060163.1| putative signal transduction eal-ggdef domains transmembrane
protein [Ralstonia solanacearum CMR15]
gi|299068645|emb|CBJ39881.1| putative signal transduction eal-ggdef domains transmembrane
protein [Ralstonia solanacearum CMR15]
Length = 1178
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ P+ VADA PD P++YVN FE TGYRA+EVLGRNCRFL +P
Sbjct: 632 SVPSGITVADAQQPDLPLVYVNPGFERMTGYRAEEVLGRNCRFLHSSEP---------GQ 682
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+R L + E + L NF+KDG +N L+P+RD G VTH +GIQ
Sbjct: 683 PALNEVRAALRDASEIRVLLRNFRKDGHAFLNNFLLSPVRDSQGAVTHYVGIQ 735
>gi|17548475|ref|NP_521815.1| hypothetical protein RS03712 [Ralstonia solanacearum GMI1000]
gi|17430722|emb|CAD17405.1| probable signal transduction eal-ggdef domains transmembrane
protein [Ralstonia solanacearum GMI1000]
Length = 1178
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ P+ VADA PD P++YVN FE TGYRA+EVLGRNCRFL +P
Sbjct: 632 SVPSGITVADAQQPDLPLVYVNPGFERMTGYRAEEVLGRNCRFLHSSEP---------GQ 682
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+R L + E + L NF+KDG +N L+P+RD G VTH +GIQ
Sbjct: 683 PALNEVRAALRDASEIRVLLRNFRKDGHAFLNNFLLSPVRDSQGAVTHYVGIQ 735
>gi|401782496|dbj|BAM36551.1| phototropin 1 [Fragaria x ananassa]
Length = 1028
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 69/110 (62%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI+Y + F TGY + EV+GRNCRFLQ D DP V+
Sbjct: 219 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGAD---------TDPEDVA 269
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
++R L + + G LLN+KKDGTP N L +API+D+ G V IG+Q+
Sbjct: 270 QLREALAKNTSYCGRLLNYKKDGTPFWNLLTIAPIKDETGKVLKFIGMQV 319
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V
Sbjct: 509 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVK 559
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNH 175
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+ I+
Sbjct: 560 KIREAIDNQTEVTVQLINYTKSGKKFWNVFHLQPMRDQKGEVQYFIGVQLDGSQHIEPLQ 619
Query: 176 VSYP 179
S P
Sbjct: 620 NSIP 623
>gi|350535803|ref|NP_001234214.1| phototropin-1 [Solanum lycopersicum]
gi|151176133|gb|ABN42185.2| phototropin-1 [Solanum lycopersicum]
Length = 1018
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI+Y + F TGY + EV+GRNCRF+Q DP V+
Sbjct: 204 TFVVSDATKPDYPILYASAGFFKMTGYTSKEVIGRNCRFMQGSG---------TDPEDVA 254
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR L+ G + G LLN+KKDGTP N L +API+DD G V IG+Q+
Sbjct: 255 TIREALQSGSTYCGRLLNYKKDGTPFWNLLTIAPIKDDAGKVLKFIGMQV 304
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V
Sbjct: 499 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVK 549
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR+ ++ + +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 550 KIRQAIDNQTDVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQL 599
>gi|209547274|ref|YP_002279192.1| hypothetical protein Rleg2_5263 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538518|gb|ACI58452.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 345
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 65/116 (56%), Gaps = 9/116 (7%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ T VV DA PD PI+ NK F TGY ADEV+GRNCRFLQ P
Sbjct: 33 FERTRMPMVVTDARKPDLPIVLANKSFLDLTGYAADEVVGRNCRFLQ---------RPAT 83
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
P+ V+EIR + E + E+LN+KK G P NRL L+PI DDG + + G QI
Sbjct: 84 SPIAVAEIRASIAEERDVSVEILNYKKSGEPFWNRLHLSPIHGDDGRILYFFGSQI 139
>gi|46518266|dbj|BAD16729.1| phototropin 2 [Adiantum capillus-veneris]
gi|46518268|dbj|BAD16730.1| phototropin 2 [Adiantum capillus-veneris]
Length = 1019
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA PD+PI+Y + F TGY + EV+GRNCRFLQ D DP
Sbjct: 218 TFQQTFVVSDATRPDYPILYASAGFFKMTGYSSKEVIGRNCRFLQGAD---------TDP 268
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V IR L EG + G LLN+KKDGT N L +API+D++G V IG+Q+
Sbjct: 269 DDVERIRESLAEGKNYCGRLLNYKKDGTAFWNLLTIAPIKDEEGNVLKFIGMQV 322
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E++GRNCRFLQ +D D V
Sbjct: 493 NFVITDPRLPDNPIIFASDSFLELTEYTREEIIGRNCRFLQGQD---------TDQKTVQ 543
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E E +LLN+ K G N L P+RD G + + IG+Q+
Sbjct: 544 KIRDAIREQREITVQLLNYTKTGKRFWNLFHLQPMRDQKGELQYFIGVQL 593
>gi|443472907|ref|ZP_21062932.1| diguanylate cyclase/phosphodiesterase [Pseudomonas pseudoalcaligenes
KF707]
gi|442903470|gb|ELS28761.1| diguanylate cyclase/phosphodiesterase [Pseudomonas pseudoalcaligenes
KF707]
Length = 1895
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 65/107 (60%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
++ DA PD PIIYVN FE TGY A E LGRNCRFLQ P + ++EI
Sbjct: 1203 LICDASAPDLPIIYVNPAFERITGYSAGETLGRNCRFLQ---------GPDREQTGIAEI 1253
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
RR LEE E L NF+KDGTP N L +AP+ D+ G +TH IG+Q
Sbjct: 1254 RRALEEQREVHVVLRNFRKDGTPFWNDLYIAPVPDEHGRITHFIGVQ 1300
>gi|399911834|ref|ZP_10780148.1| response regulator receiver modulated PAS/PAC sensor-containing
diguanylate cyclase/phosphodiesterase [Halomonas sp.
KM-1]
Length = 830
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 9/106 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
V+ADA PD PI+YVN FE TGY DEV+GRNCRFLQ P DP + I
Sbjct: 148 VIADARAPDLPIVYVNAAFERITGYSRDEVMGRNCRFLQGDQP---------DPALGQRI 198
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
RR L+ +F L N++KDG+P N L ++P+RDD ++H IGI
Sbjct: 199 RRELDAQRDFHMTLCNYRKDGSPFWNDLHISPVRDDTQQISHYIGI 244
>gi|357167375|ref|XP_003581132.1| PREDICTED: phototropin-2-like [Brachypodium distachyon]
Length = 909
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD PIIY + F TGY A E++GRNCRFLQ + D VS
Sbjct: 117 TFVVSDATRPDCPIIYASAGFYTMTGYSAKEIIGRNCRFLQGAE---------TDQKEVS 167
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ G F G LLN++KDGTP N L + PIRDD G V IG+Q+
Sbjct: 168 KIRDAVKAGKSFCGRLLNYRKDGTPFWNLLTVTPIRDDQGKVIKFIGMQV 217
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ + D V
Sbjct: 394 NFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGAE---------TDQTTVD 444
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E E +L+N+ K G N L P+ D G + + IG+Q+
Sbjct: 445 KIRDAIREQKEVTVQLINYTKSGKKFWNLFHLQPMWDQKGELQYFIGVQL 494
>gi|424891967|ref|ZP_18315547.1| PAS domain S-box [Rhizobium leguminosarum bv. trifolii WSM2297]
gi|424893803|ref|ZP_18317383.1| PAS domain S-box [Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393183248|gb|EJC83285.1| PAS domain S-box [Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393185084|gb|EJC85121.1| PAS domain S-box [Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 345
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
Query: 48 LFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP 107
+ + T VV DA PD PI+ NK F TGY ADEVLGRNCRFLQ P
Sbjct: 31 IAFERTRMPMVVTDARRPDLPIVLANKSFLELTGYSADEVLGRNCRFLQ---------GP 81
Query: 108 LVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
P+ V+EIR + + E E+LN+KK+G P NRL L+PI DDG + + G QI
Sbjct: 82 ATSPIAVAEIRAGIADEREASVEILNYKKNGEPFWNRLHLSPIHGDDGRILYFFGSQI 139
>gi|255582071|ref|XP_002531832.1| serine/threonine protein kinase, putative [Ricinus communis]
gi|223528528|gb|EEF30552.1| serine/threonine protein kinase, putative [Ricinus communis]
Length = 1006
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 13/121 (10%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI+Y + F TGY + EV+GRNCRFLQ D DP V+
Sbjct: 208 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGAD---------TDPEDVA 258
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI----FSEAKI 171
+IR L+ + G LLN+KKDGTP N L ++PI+D+ G V IG+Q+ F+E
Sbjct: 259 KIREALQSENSYCGRLLNYKKDGTPFWNLLTISPIKDESGKVLKYIGMQVEVSKFTEGSK 318
Query: 172 D 172
D
Sbjct: 319 D 319
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V
Sbjct: 494 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVR 544
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ + +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 545 KIREAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQL 594
>gi|424917421|ref|ZP_18340785.1| PAS domain S-box [Rhizobium leguminosarum bv. trifolii WSM597]
gi|392853597|gb|EJB06118.1| PAS domain S-box [Rhizobium leguminosarum bv. trifolii WSM597]
Length = 345
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 65/116 (56%), Gaps = 9/116 (7%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ T VV DA PD PI+ NK F TGY ADEV+GRNCRFLQ P
Sbjct: 33 FERTRMPMVVTDARKPDLPIVLANKSFLDLTGYAADEVVGRNCRFLQ---------GPAT 83
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
P+ V+EIR + E + E+LN+KK G P NRL L+PI DDG + + G QI
Sbjct: 84 SPIAVAEIRASIAEERDVSVEILNYKKSGEPFWNRLHLSPIHGDDGRILYFFGSQI 139
>gi|24899168|dbj|BAC23098.1| phototropin [Vicia faba]
Length = 963
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI+Y + F TGY + EV+GRNCRF+Q D DP V+
Sbjct: 162 TFVVSDATKPDYPIMYASAGFFSMTGYTSKEVIGRNCRFMQGAD---------TDPNDVA 212
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR L G + G LLN+KKDGT N L +API+D+ G + +IG+Q+
Sbjct: 213 KIREALAAGTSYCGRLLNYKKDGTTFWNLLTIAPIKDEHGKILKLIGMQV 262
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V
Sbjct: 447 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVK 497
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 498 KIRYAIDNQTEVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQL 547
>gi|334116631|ref|ZP_08490723.1| PAS/PAC sensor signal transduction histidine kinase [Microcoleus
vaginatus FGP-2]
gi|333461451|gb|EGK90056.1| PAS/PAC sensor signal transduction histidine kinase [Microcoleus
vaginatus FGP-2]
Length = 1102
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 76/140 (54%), Gaps = 18/140 (12%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ S ++ADA PD PIIY N FE TGY A+EV+GRNCRFLQ P D
Sbjct: 17 ASSNSILIADASRPDIPIIYCNPAFEKLTGYSAEEVIGRNCRFLQ---------GPDTDQ 67
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
+ ++R L G E Q L N++KD TP N L ++PI D++G +TH IG+Q
Sbjct: 68 AELDKLRSSLRAGTEIQVVLKNYRKDKTPFWNELIVSPILDNEGKLTHFIGVQ------- 120
Query: 172 DLNHVSYPVFKENCNQQYDQ 191
N +S V E Q+ ++
Sbjct: 121 --NDISKRVAAETALQESEE 138
>gi|168027784|ref|XP_001766409.1| PHOTB1 phototropin B1 blue light photoreceptor [Physcomitrella
patens subsp. patens]
gi|50510315|dbj|BAD32624.1| phototropin [Physcomitrella patens]
gi|162682318|gb|EDQ68737.1| PHOTB1 phototropin B1 blue light photoreceptor [Physcomitrella
patens subsp. patens]
Length = 1133
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PDFPI+Y + F TGY EV+GRNCRFLQ D V+
Sbjct: 315 TFVVSDATQPDFPILYASAGFFNMTGYTPKEVIGRNCRFLQGAG---------TDNADVA 365
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR L+EG F G LLN+KKDG+ N L + PI+DDDG V IG+Q+
Sbjct: 366 RIREALKEGKSFCGRLLNYKKDGSAFWNLLTITPIKDDDGKVLKFIGMQV 415
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D VV
Sbjct: 606 NFVITDPRLPDNPIIFASDEFLELTEYTREEILGRNCRFLQ---------GPDTDLAVVD 656
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + + +LLN+ K G P N L +RD DG + + IG+Q+
Sbjct: 657 QIRDAIAARRDITVQLLNYTKSGKPFWNLFHLQAMRDHDGELQYFIGVQL 706
>gi|428316777|ref|YP_007114659.1| PAS/PAC sensor signal transduction histidine kinase [Oscillatoria
nigro-viridis PCC 7112]
gi|428240457|gb|AFZ06243.1| PAS/PAC sensor signal transduction histidine kinase [Oscillatoria
nigro-viridis PCC 7112]
Length = 1102
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ S ++ADA PD PIIY N FE TGY A+EV+GRNCRFLQ P D
Sbjct: 17 ASSNSILIADARQPDTPIIYCNPAFEKLTGYSAEEVIGRNCRFLQ---------GPDTDR 67
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ ++R L G E Q L N++KD TP N L ++PI D++G +TH IG+Q
Sbjct: 68 AELDKLRSSLRSGTEIQVVLKNYRKDKTPFWNELMVSPILDNEGKLTHFIGVQ 120
>gi|187926137|ref|YP_001892482.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
[Ralstonia pickettii 12J]
gi|241665625|ref|YP_002983984.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
[Ralstonia pickettii 12D]
gi|187727891|gb|ACD29055.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Ralstonia pickettii 12J]
gi|240867652|gb|ACS65312.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Ralstonia pickettii 12D]
Length = 1183
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ P+ VADA PDFPI+YVN FE TGYRA+E+LGRN RFL +P
Sbjct: 637 SVPSGITVADAQQPDFPIVYVNPGFERMTGYRAEEILGRNARFLHSSEP---------GQ 687
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+R L + E + L NF+KDG +N L+P+RD G VTH +GIQ
Sbjct: 688 PALNEVRTALRDESEIRVLLRNFRKDGHAFLNNFLLSPVRDAKGAVTHYVGIQ 740
>gi|359785259|ref|ZP_09288412.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Halomonas sp. GFAJ-1]
gi|359297374|gb|EHK61609.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Halomonas sp. GFAJ-1]
Length = 874
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 74/122 (60%), Gaps = 10/122 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
++ADA PD P++Y NK F TGY ++V+G NCRFLQ D DP VV+++
Sbjct: 328 LIADASLPDTPVVYANKAFTAITGYSQEDVIGHNCRFLQGPDS---------DPEVVAQL 378
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI-FSEAKIDLNHV 176
RR ++E E + N+++DGTP N L +AP+RD +G VTH +GIQ S+ K +
Sbjct: 379 RRGIKERREVHVTICNYRQDGTPFWNDLYIAPVRDQEGQVTHFVGIQHDISQQKASEARL 438
Query: 177 SY 178
SY
Sbjct: 439 SY 440
>gi|410478507|ref|YP_006766144.1| signal transduction protein [Leptospirillum ferriphilum ML-04]
gi|406773759|gb|AFS53184.1| putative signal transduction protein [Leptospirillum ferriphilum
ML-04]
Length = 1036
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 67/115 (58%), Gaps = 9/115 (7%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ ++ S + DA PDFP+I+ N F TGY E +G+NCRFLQ D + R
Sbjct: 355 FESSTVSLCICDALQPDFPVIFANDQFIRLTGYPRSETIGKNCRFLQGADREQESR---- 410
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+EIR+ +E G + L N++KDGTP +N L L PI D DGTVTH +GIQ
Sbjct: 411 -----TEIRQAIEAGKSVRTMLRNYRKDGTPFINELSLFPITDPDGTVTHYLGIQ 460
>gi|424866223|ref|ZP_18290064.1| Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Leptospirillum sp. Group II 'C75']
gi|387223020|gb|EIJ77392.1| Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Leptospirillum sp. Group II 'C75']
Length = 1036
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 67/115 (58%), Gaps = 9/115 (7%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ ++ S + DA PDFP+I+ N F TGY E +G+NCRFLQ D + R
Sbjct: 355 FESSTVSLCICDALQPDFPVIFANDQFIRLTGYPRSETIGKNCRFLQGADREQESR---- 410
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+EIR+ +E G + L N++KDGTP +N L L PI D DGTVTH +GIQ
Sbjct: 411 -----TEIRQAIEAGKSVRTMLRNYRKDGTPFINELSLFPITDPDGTVTHYLGIQ 460
>gi|194709097|pdb|2Z6D|A Chain A, Crystal Structure Of Lov1 Domain Of Phototropin2 From
Arabidopsis Thaliana
gi|194709098|pdb|2Z6D|B Chain B, Crystal Structure Of Lov1 Domain Of Phototropin2 From
Arabidopsis Thaliana
Length = 130
Score = 101 bits (252), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA P PI+Y + F TGY + E++GRNCRFLQ P D
Sbjct: 14 TLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQ---------GPDTDK 64
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V++IR C++ G + G LLN+KKDGTP N L + PI+DD G IG+Q+
Sbjct: 65 NEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQV 118
>gi|124515794|gb|EAY57303.1| Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Leptospirillum rubarum]
Length = 1036
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 67/115 (58%), Gaps = 9/115 (7%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ ++ S + DA PDFP+I+ N F TGY E +G+NCRFLQ D + R
Sbjct: 355 FESSTVSLCICDALQPDFPVIFANDQFIRLTGYPRSETIGKNCRFLQGADREQESR---- 410
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+EIR+ +E G + L N++KDGTP +N L L PI D DGTVTH +GIQ
Sbjct: 411 -----TEIRQAIEAGKSVRTMLRNYRKDGTPFINELSLFPITDPDGTVTHYLGIQ 460
>gi|242081217|ref|XP_002445377.1| hypothetical protein SORBIDRAFT_07g014860 [Sorghum bicolor]
gi|241941727|gb|EES14872.1| hypothetical protein SORBIDRAFT_07g014860 [Sorghum bicolor]
Length = 890
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD PIIY + F TGY A +V+GRNCRFLQ P D V+
Sbjct: 104 TFVVSDATRPDCPIIYASAGFYTMTGYAAKDVVGRNCRFLQ---------GPDTDMDEVA 154
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ G F G LLN++KDGTP N L + PIRDD+G V IG+Q+
Sbjct: 155 KIRDAVKTGRSFCGRLLNYRKDGTPFWNMLTVTPIRDDNGKVIKFIGMQV 204
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ + D V
Sbjct: 372 NFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGAE---------TDMSTVD 422
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 423 KIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 472
>gi|414870626|tpg|DAA49183.1| TPA: putative phototropin family protein kinase [Zea mays]
Length = 703
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD PIIY + F TGY EV GRNCRFLQ P D V+
Sbjct: 115 TFVVSDATRPDCPIIYASAGFYTMTGYTPKEVTGRNCRFLQ---------GPDTDMNEVA 165
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ G F G LLN++KDGTP N L + PIRDD+G V IG+Q+
Sbjct: 166 KIRDAVKTGRSFCGRLLNYRKDGTPFWNMLTVTPIRDDNGKVIKFIGMQV 215
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 389 NFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDMSTVD 439
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 440 KIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 489
>gi|352105826|ref|ZP_08960990.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Halomonas sp. HAL1]
gi|350598249|gb|EHA14372.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Halomonas sp. HAL1]
Length = 709
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 88/170 (51%), Gaps = 32/170 (18%)
Query: 37 DDTELSL-KPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFL 95
D++EL L K G+ +P V+ADA P P++YVN F TGY A+E LGRNCRFL
Sbjct: 148 DESELRLLKRGI---EASPNGVVMADATQPHLPLVYVNSAFTDITGYSAEEALGRNCRFL 204
Query: 96 QYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDG 155
Q D DP+ + EIRR + + + Q L N++ DGT N+L ++P+ ++ G
Sbjct: 205 QGEDS---------DPMAIEEIRRAIVQQQDVQVLLCNYRFDGTLFWNQLSISPVFNNSG 255
Query: 156 TVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQY-FSGGHSPLS 204
TH IGIQ ++ +Q +Q A+ + H PL+
Sbjct: 256 VCTHFIGIQ------------------QDITRQREQEARLAYQAAHDPLT 287
>gi|357161363|ref|XP_003579067.1| PREDICTED: phototropin-1A-like [Brachypodium distachyon]
Length = 921
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 76/134 (56%), Gaps = 12/134 (8%)
Query: 32 GGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRN 91
GGG L+ L + T FVV+DA P PI+Y + F TGY + EV+GRN
Sbjct: 113 GGGAIPRVSEELRAALSAFQQT---FVVSDATKPGHPIMYASAGFFNMTGYTSKEVVGRN 169
Query: 92 CRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR 151
CRFLQ DP +++IR+ L +G + G +LN+KKDGTP N L +API+
Sbjct: 170 CRFLQGSG---------TDPAEIAKIRQALADGSNYCGRVLNYKKDGTPFWNLLTIAPIK 220
Query: 152 DDDGTVTHIIGIQI 165
D+DG V IG+Q+
Sbjct: 221 DEDGRVLKFIGMQV 234
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 411 NFVITDPRLPDNPIIFASDSFLQLTEYCREEILGRNCRFLQ---------GPETDRATVR 461
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ + +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 462 KIRDAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 511
>gi|226531740|ref|NP_001147477.1| phototropin-1 [Zea mays]
gi|195611646|gb|ACG27653.1| phototropin-1 [Zea mays]
Length = 899
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD PIIY + F TGY EV GRNCRFLQ P D V+
Sbjct: 107 TFVVSDATRPDCPIIYASAGFYTMTGYTPKEVTGRNCRFLQ---------GPDTDMNEVA 157
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ G F G LLN++KDGTP N L + PIRDD+G V IG+Q+
Sbjct: 158 KIRDAVKTGRSFCGRLLNYRKDGTPFWNMLTVTPIRDDNGKVIKFIGMQV 207
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 383 NFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDMSTVD 433
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 434 KIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 483
>gi|390949606|ref|YP_006413365.1| PAS domain-containing protein [Thiocystis violascens DSM 198]
gi|390426175|gb|AFL73240.1| PAS domain S-box [Thiocystis violascens DSM 198]
Length = 515
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 36 GDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFL 95
DD+EL L+ + + VADA +PD P++Y N F TGY A E+LGRNCRFL
Sbjct: 8 ADDSEL-LRWKMRVMEAINSGVSVADAREPDLPLVYANPAFLAMTGYTAAEILGRNCRFL 66
Query: 96 QYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDG 155
Q D R P ++ IR L EG E L N++KDG+ N+L LAP+RD G
Sbjct: 67 QAHDT----RQPEIET-----IRAALREGRETSVLLRNYRKDGSLFWNQLTLAPVRDQCG 117
Query: 156 TVTHIIGIQ 164
+TH +GIQ
Sbjct: 118 QITHYVGIQ 126
>gi|20260484|gb|AAM13140.1| unknown protein [Arabidopsis thaliana]
gi|31711968|gb|AAP68340.1| At5g58140 [Arabidopsis thaliana]
Length = 549
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA P PI+Y + F TGY + E++GRNCRFLQ P D
Sbjct: 130 TLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQ---------GPDTDK 180
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V++IR C++ G + G LLN+KKDGTP N L + PI+DD G IG+Q+
Sbjct: 181 NEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQV 234
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 390 NFVISDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDQATVQ 440
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + + E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 441 KIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 490
>gi|414870627|tpg|DAA49184.1| TPA: putative phototropin family protein kinase [Zea mays]
Length = 905
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD PIIY + F TGY EV GRNCRFLQ P D V+
Sbjct: 115 TFVVSDATRPDCPIIYASAGFYTMTGYTPKEVTGRNCRFLQ---------GPDTDMNEVA 165
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ G F G LLN++KDGTP N L + PIRDD+G V IG+Q+
Sbjct: 166 KIRDAVKTGRSFCGRLLNYRKDGTPFWNMLTVTPIRDDNGKVIKFIGMQV 215
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 389 NFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDMSTVD 439
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 440 KIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 489
>gi|253750642|gb|ACT35017.1| phytochrome 3 [Coniogramme intermedia var. glabra]
Length = 1443
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 19/149 (12%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
TSFVV DA PD PII+ + F TGY A EV+G NCRFLQ P +P V+
Sbjct: 675 TSFVVVDALKPDLPIIFASTGFFNLTGYSAREVIGGNCRFLQ---------GPDTNPAVI 725
Query: 115 SEIRRCLE-EGI-EFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI------- 165
+ IR+ L +G F G LLN++KDG+ N L +API+DD GT+ ++G+Q+
Sbjct: 726 ASIRQALAPQGTGTFCGRLLNYRKDGSNFWNLLTIAPIKDDSGTIVKLVGVQLEVSKYTE 785
Query: 166 -FSEAKIDLNHVSYPVFKENCNQQYDQSA 193
+ E K+ N + + K + Q SA
Sbjct: 786 GYREDKLRPNRLPQSLIKYDVRHQDKVSA 814
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ D D PII+ + F T Y +EVLG NCRFLQ RD D V
Sbjct: 946 SFVITDPRLLDNPIIFASDQFLELTEYSREEVLGENCRFLQGRD---------TDRKAVQ 996
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR ++EG + +LLN+K+ G P N L ++D G + + IG+Q
Sbjct: 997 LIRDAVKEGRDMTVQLLNYKRSGKPFWNLFHLQAMKDKKGNLQYFIGVQ 1045
>gi|30697015|ref|NP_568874.2| phototropin 2 [Arabidopsis thaliana]
gi|332009618|gb|AED97001.1| phototropin 2 [Arabidopsis thaliana]
Length = 689
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA P PI+Y + F TGY + E++GRNCRFLQ P D
Sbjct: 130 TLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQ---------GPDTDK 180
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V++IR C++ G + G LLN+KKDGTP N L + PI+DD G IG+Q+
Sbjct: 181 NEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQV 234
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 390 NFVISDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDQATVQ 440
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + + E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 441 KIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 490
>gi|75337608|sp|Q9ST27.1|PHOT2_ORYSJ RecName: Full=Phototropin-2; AltName: Full=Non-phototropic
hypocotyl protein 1B; Short=OsNPH1B
gi|6006310|dbj|BAA84779.1| nonphototrophic hypocotyl 1b [Oryza sativa Japonica Group]
gi|38344593|emb|CAD40495.2| OSJNBa0079M09.13 [Oryza sativa Japonica Group]
gi|116308943|emb|CAH66070.1| OSIGBa0092O07.5 [Oryza sativa Indica Group]
Length = 907
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD PIIY ++ F TGY EV+GRNCRFLQ P D V+
Sbjct: 103 TFVVSDATRPDCPIIYASEGFFTMTGYSPREVVGRNCRFLQ---------GPDTDAAEVA 153
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ G F G LLN++KDG P N L + PIRDD+G V IG+Q+
Sbjct: 154 KIRDAVKHGRSFCGRLLNYRKDGAPFWNLLTVTPIRDDNGKVIKFIGMQV 203
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 389 NFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQGTVD 439
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 440 KIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 489
>gi|222628578|gb|EEE60710.1| hypothetical protein OsJ_14207 [Oryza sativa Japonica Group]
Length = 888
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD PIIY ++ F TGY EV+GRNCRFLQ P D V+
Sbjct: 103 TFVVSDATRPDCPIIYASEGFFTMTGYSPREVVGRNCRFLQ---------GPDTDAAEVA 153
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ G F G LLN++KDG P N L + PIRDD+G V IG+Q+
Sbjct: 154 KIRDAVKHGRSFCGRLLNYRKDGAPFWNLLTVTPIRDDNGKVIKFIGMQV 203
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 370 NFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQGTVD 420
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 421 KIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 470
>gi|145362057|ref|NP_851212.2| phototropin 2 [Arabidopsis thaliana]
gi|332009620|gb|AED97003.1| phototropin 2 [Arabidopsis thaliana]
Length = 898
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA P PI+Y + F TGY + E++GRNCRFLQ P D
Sbjct: 130 TLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQ---------GPDTDK 180
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V++IR C++ G + G LLN+KKDGTP N L + PI+DD G IG+Q+
Sbjct: 181 NEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQV 234
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 390 NFVISDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDQATVQ 440
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + + E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 441 KIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 490
>gi|218194566|gb|EEC76993.1| hypothetical protein OsI_15306 [Oryza sativa Indica Group]
Length = 1015
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD PIIY ++ F TGY EV+GRNCRFLQ P D V+
Sbjct: 103 TFVVSDATRPDCPIIYASEGFFTMTGYSPREVVGRNCRFLQ---------GPDTDAAEVA 153
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ G F G LLN++KDG P N L + PIRDD+G V IG+Q+
Sbjct: 154 KIRDAVKHGRSFCGRLLNYRKDGAPFWNLLTVTPIRDDNGKVIKFIGMQV 203
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 389 NFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQGTVD 439
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 440 KIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 489
>gi|404395725|ref|ZP_10987523.1| diguanylate cyclase (GGDEF) domain-containing protein [Ralstonia
sp. 5_2_56FAA]
gi|348613219|gb|EGY62814.1| diguanylate cyclase (GGDEF) domain-containing protein [Ralstonia
sp. 5_2_56FAA]
Length = 1183
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 66/113 (58%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ P+ VADA PD PI+YVN FE TGYRA+EVLGRN RFL +P
Sbjct: 637 SVPSGITVADAQQPDLPIVYVNPGFERMTGYRAEEVLGRNARFLHSSEP---------GQ 687
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+R L + E + L NF+KDG +N L+P+RD G VTH +GIQ
Sbjct: 688 PALNEVRTALRDESEIRVLLRNFRKDGHAFLNNFLLSPVRDAKGAVTHYVGIQ 740
>gi|125575911|gb|EAZ17133.1| hypothetical protein OsJ_32634 [Oryza sativa Japonica Group]
Length = 853
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 17/141 (12%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA P+ PI+Y + F TGY + EV+GRNCRFLQ DP +
Sbjct: 137 TFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPHEID 187
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI----FSEAKI 171
+IR+ L G + G +LN+KKDGTP N L +API+D+DG + IG+Q+ ++E K
Sbjct: 188 KIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVSKYTEGKK 247
Query: 172 DL----NHVSYPVFKENCNQQ 188
D N +S + K + Q+
Sbjct: 248 DTVVRPNGLSESLIKYDARQK 268
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 414 NFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQ---------GPETDRATVR 464
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 465 KIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 514
>gi|30697007|ref|NP_851210.1| phototropin 2 [Arabidopsis thaliana]
gi|30697010|ref|NP_851211.1| phototropin 2 [Arabidopsis thaliana]
gi|82593023|sp|P93025.2|PHOT2_ARATH RecName: Full=Phototropin-2; AltName: Full=Defective in chloroplast
avoidance protein 1; AltName: Full=Non-phototropic
hypocotyl 1-like protein 1; Short=AtKin7;
Short=NPH1-like protein 1
gi|5391442|gb|AAC27293.2| non phototropic hypocotyl 1-like [Arabidopsis thaliana]
gi|10176790|dbj|BAB09904.1| unnamed protein product [Arabidopsis thaliana]
gi|332009619|gb|AED97002.1| phototropin 2 [Arabidopsis thaliana]
gi|332009621|gb|AED97004.1| phototropin 2 [Arabidopsis thaliana]
Length = 915
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA P PI+Y + F TGY + E++GRNCRFLQ P D
Sbjct: 130 TLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQ---------GPDTDK 180
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V++IR C++ G + G LLN+KKDGTP N L + PI+DD G IG+Q+
Sbjct: 181 NEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQV 234
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 390 NFVISDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDQATVQ 440
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + + E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 441 KIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 490
>gi|7804485|dbj|BAA95669.1| phototropin [Adiantum capillus-veneris]
Length = 1092
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+AD PD PI+Y + F TGY + EV+GRNCRFLQ ++ DP +
Sbjct: 280 TFVIADGTKPDLPIMYASAGFFKMTGYTSSEVIGRNCRFLQGKE---------TDPEEID 330
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR C+ +G + G LLN+KKDG+ N L ++PI+D DG+V IG+Q+
Sbjct: 331 RIRECISKGSGYCGRLLNYKKDGSAFWNLLTISPIKDVDGSVLKYIGMQV 380
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P + V
Sbjct: 568 NFVITDPRLPDNPIIFASDNFLELTEYSREEILGRNCRFLQ---------GPDTNRETVK 618
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR ++ E +LLN+ K G N L P+RD G + + G+Q+
Sbjct: 619 LIRDAIDNEKEVTVQLLNYTKTGRTFWNLFHLQPMRDHKGELQYFTGVQL 668
>gi|115486852|ref|NP_001065232.1| Os12g0101800 [Oryza sativa Japonica Group]
gi|122248708|sp|Q2QYY8.2|PHT1A_ORYSJ RecName: Full=Phototropin-1A; AltName: Full=Non-phototropic
hypocotyl protein 1A; Short=OsNPH1a
gi|108862060|gb|ABA95572.2| Nonphototropic hypocotyl protein 1, putative, expressed [Oryza
sativa Japonica Group]
gi|113648420|dbj|BAF28932.1| Os12g0101800 [Oryza sativa Japonica Group]
Length = 921
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 17/141 (12%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA P+ PI+Y + F TGY + EV+GRNCRFLQ DP +
Sbjct: 137 TFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPHEID 187
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI----FSEAKI 171
+IR+ L G + G +LN+KKDGTP N L +API+D+DG + IG+Q+ ++E K
Sbjct: 188 KIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVSKYTEGKK 247
Query: 172 DL----NHVSYPVFKENCNQQ 188
D N +S + K + Q+
Sbjct: 248 DTVVRPNGLSESLIKYDARQK 268
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 414 NFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQ---------GPETDRATVR 464
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 465 KIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 514
>gi|119484845|ref|ZP_01619327.1| Multi-sensor Signal Transduction Histidine Kinase [Lyngbya sp. PCC
8106]
gi|119457663|gb|EAW38787.1| Multi-sensor Signal Transduction Histidine Kinase [Lyngbya sp. PCC
8106]
Length = 1211
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 94/194 (48%), Gaps = 26/194 (13%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
+P+ V++DA D PIIY N FE TGY + ++ GRNCRFLQ D DP
Sbjct: 355 SPSGIVISDAKAKDNPIIYCNPTFERITGYSSSDIQGRNCRFLQGND---------TDPQ 405
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI------F 166
+ IR L E + L N++KDGTP N L ++P+RD G VTH IGIQ
Sbjct: 406 AIETIRNSLREAKDCLVTLKNYRKDGTPFWNELAISPVRDTTGEVTHFIGIQTDISERKR 465
Query: 167 SEAKIDLNHVSYPVFKENCN---QQYDQSAQYFSGGHSPLSQHQDICGILQLS-DEVLAH 222
+E + + Y + EN +++ Y SP + +L+ +E++ H
Sbjct: 466 AEEALKTSEERYRLLAENATDLISRHNSEGIYLYA--SPACR-----KLLKYEPEELIGH 518
Query: 223 NILSRLTPRDVASI 236
+ P DVAS+
Sbjct: 519 SAYDFFHPEDVASV 532
>gi|6006312|dbj|BAA84780.1| nonphototrophic hypocotyl 1a [Oryza sativa Japonica Group]
Length = 921
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 17/141 (12%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA P+ PI+Y + F TGY + EV+GRNCRFLQ DP +
Sbjct: 137 TFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPHEID 187
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI----FSEAKI 171
+IR+ L G + G +LN+KKDGTP N L +API+D+DG + IG+Q+ ++E K
Sbjct: 188 KIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVSKYTEGKK 247
Query: 172 DL----NHVSYPVFKENCNQQ 188
D N +S + K + Q+
Sbjct: 248 DTVVRPNGLSESLIKYDARQK 268
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 414 NFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQ---------GPETDRATVR 464
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 465 KIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 514
>gi|309779069|ref|ZP_07673836.1| sensory box/GGDEF family protein [Ralstonia sp. 5_7_47FAA]
gi|308922134|gb|EFP67764.1| sensory box/GGDEF family protein [Ralstonia sp. 5_7_47FAA]
Length = 957
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 66/113 (58%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ P+ VADA PD PI+YVN FE TGYRA+EVLGRN RFL +P
Sbjct: 411 SVPSGITVADAQQPDLPIVYVNPGFERMTGYRAEEVLGRNARFLHSSEP---------GQ 461
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+R L + E + L NF+KDG +N L+P+RD G VTH +GIQ
Sbjct: 462 PALNEVRTALRDESEIRVLLRNFRKDGHAFLNNFLLSPVRDAKGAVTHYVGIQ 514
>gi|115483707|ref|NP_001065225.1| Os11g0102200 [Oryza sativa Japonica Group]
gi|122248863|sp|Q2RBR1.2|PHT1B_ORYSJ RecName: Full=Phototropin-1B
gi|108863901|gb|ABA91098.2| Nonphototropic hypocotyl protein 1, putative, expressed [Oryza
sativa Japonica Group]
gi|113644219|dbj|BAF27360.1| Os11g0102200 [Oryza sativa Japonica Group]
Length = 921
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 17/141 (12%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA P+ PI+Y + F TGY + EV+GRNCRFLQ DP +
Sbjct: 137 TFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPHEID 187
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI----FSEAKI 171
+IR+ L G + G +LN+KKDGTP N L +API+D+DG + IG+Q+ ++E K
Sbjct: 188 KIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVSKYTEGKK 247
Query: 172 DL----NHVSYPVFKENCNQQ 188
D N +S + K + Q+
Sbjct: 248 DTVVRPNGLSESLIKYDARQK 268
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 414 NFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQ---------GPETDRATVR 464
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 465 KIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 514
>gi|297793331|ref|XP_002864550.1| hypothetical protein ARALYDRAFT_495918 [Arabidopsis lyrata subsp.
lyrata]
gi|297310385|gb|EFH40809.1| hypothetical protein ARALYDRAFT_495918 [Arabidopsis lyrata subsp.
lyrata]
Length = 915
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA P PI+Y + F TGY + E++GRNCRFLQ P D
Sbjct: 130 TLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQ---------GPDTDK 180
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V++IR C++ G + G LLN+KKDGTP N L + PI+DD G IG+Q+
Sbjct: 181 NEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQV 234
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 388 NFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQATVQ 438
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + + E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 439 KIRDAIRDQTEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 488
>gi|218186235|gb|EEC68662.1| hypothetical protein OsI_37109 [Oryza sativa Indica Group]
Length = 921
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 17/141 (12%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA P+ PI+Y + F TGY + EV+GRNCRFLQ DP +
Sbjct: 137 TFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPHEID 187
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI----FSEAKI 171
+IR+ L G + G +LN+KKDGTP N L +API+D+DG + IG+Q+ ++E K
Sbjct: 188 KIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVSKYTEGKK 247
Query: 172 DL----NHVSYPVFKENCNQQ 188
D N +S + K + Q+
Sbjct: 248 DTVVRPNGLSESLIKYDARQK 268
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 414 NFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQ---------GPETDRATVR 464
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 465 KIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 514
>gi|108863902|gb|ABG22325.1| Nonphototropic hypocotyl protein 1, putative, expressed [Oryza
sativa Japonica Group]
Length = 875
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 17/141 (12%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA P+ PI+Y + F TGY + EV+GRNCRFLQ DP +
Sbjct: 137 TFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPHEID 187
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI----FSEAKI 171
+IR+ L G + G +LN+KKDGTP N L +API+D+DG + IG+Q+ ++E K
Sbjct: 188 KIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVSKYTEGKK 247
Query: 172 DL----NHVSYPVFKENCNQQ 188
D N +S + K + Q+
Sbjct: 248 DTVVRPNGLSESLIKYDARQK 268
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 414 NFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQ---------GPETDRATVR 464
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 465 KIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 514
>gi|108862062|gb|ABG21842.1| Nonphototropic hypocotyl protein 1, putative, expressed [Oryza
sativa Japonica Group]
gi|108862063|gb|ABG21843.1| Nonphototropic hypocotyl protein 1, putative, expressed [Oryza
sativa Japonica Group]
Length = 854
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 17/141 (12%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA P+ PI+Y + F TGY + EV+GRNCRFLQ DP +
Sbjct: 137 TFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPHEID 187
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI----FSEAKI 171
+IR+ L G + G +LN+KKDGTP N L +API+D+DG + IG+Q+ ++E K
Sbjct: 188 KIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVSKYTEGKK 247
Query: 172 DL----NHVSYPVFKENCNQQ 188
D N +S + K + Q+
Sbjct: 248 DTVVRPNGLSESLIKYDARQK 268
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 414 NFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQ---------GPETDRATVR 464
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 465 KIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 514
>gi|350537331|ref|NP_001234289.1| phototropin-2 [Solanum lycopersicum]
gi|154000865|gb|ABS57001.1| phototropin-2 [Solanum lycopersicum]
Length = 952
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 81/159 (50%), Gaps = 24/159 (15%)
Query: 19 GSGKRQKCSFEGGGGGGGDDTELS------------LKPGLLFYPTTPTSFVVADAFDPD 66
G+R K S E G +E S LK L T +FVV+DA PD
Sbjct: 112 ADGERSKNSLEKNSVGSTRTSEESNLGAEFPRVSQDLKDAL---ATLQQTFVVSDATKPD 168
Query: 67 FPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIE 126
PI+Y + F TGY + E++GRNCRFLQ +D D V++IR ++ G
Sbjct: 169 CPIVYASSGFFTMTGYSSKEIVGRNCRFLQGKD---------TDQNEVAKIRDAVKTGKS 219
Query: 127 FQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+ G LLN+KK+GTP N L + PI+DD G IG+Q+
Sbjct: 220 YCGRLLNYKKNGTPFWNLLTVTPIKDDSGKTIKFIGMQV 258
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T + +E+LGRNCRFLQ P D V
Sbjct: 433 NFVITDPRLPDNPIIFASDSFLELTEFTREEILGRNCRFLQ---------GPETDQATVQ 483
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 484 KIRDAIKEQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 533
>gi|34224025|gb|AAQ63177.1| phototropin-like protein [Pisum sativum]
Length = 468
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI+Y + F TGY + EV+GRNCR +Q D DP V+
Sbjct: 165 TFVVSDATKPDYPIMYASAGFFNMTGYTSKEVIGRNCRSMQGAD---------TDPNDVA 215
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + G + G LLN+KKDGT N L +API+D+ G + +IG+Q+
Sbjct: 216 KIREAVAAGTSYCGRLLNYKKDGTTFWNLLTIAPIKDEHGKILKLIGMQV 265
>gi|113911589|gb|ABI48276.1| phototropin-2 [Solanum lycopersicum]
Length = 952
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 81/159 (50%), Gaps = 24/159 (15%)
Query: 19 GSGKRQKCSFEGGGGGGGDDTELS------------LKPGLLFYPTTPTSFVVADAFDPD 66
G+R K S E G +E S LK L T +FVV+DA PD
Sbjct: 112 ADGERSKNSLEKNSVGSTRTSEESNLGAEFPRVSQDLKDALA---TLQQTFVVSDATKPD 168
Query: 67 FPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIE 126
PI+Y + F TGY + E++GRNCRFLQ +D D V++IR ++ G
Sbjct: 169 CPIVYASSGFFTMTGYSSKEIVGRNCRFLQGKD---------TDQNEVAKIRDAVKTGKS 219
Query: 127 FQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+ G LLN+KK+GTP N L + PI+DD G IG+Q+
Sbjct: 220 YCGRLLNYKKNGTPFWNLLTVTPIKDDSGKTIKFIGMQV 258
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T + +E+LGRNCRFLQ P D V
Sbjct: 433 NFVITDPRLPDNPIIFASDSFLELTEFTREEILGRNCRFLQ---------GPETDQATVQ 483
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 484 KIRDAIKEQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 533
>gi|359491361|ref|XP_002265482.2| PREDICTED: kelch domain-containing protein 3-like [Vitis vinifera]
Length = 589
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 128/268 (47%), Gaps = 26/268 (9%)
Query: 353 SSPPGRWGHTLSSLN-GSWLVVFGGCGRQGL-LNDVFVLDLDAKQPTWIE-VSGGAPPLP 409
S P RWGHT +++ G L +FGG G+ N V V D K TW E + G+PP P
Sbjct: 22 SGPGKRWGHTCNAIKGGKLLYIFGGYGKDNCQTNQVHVFDTVKK--TWNEPMIKGSPPTP 79
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLS 469
R H SC G L V GG TD L D ++LD +T + + P +R GH+ +
Sbjct: 80 RDSH-SCTTVGDNLFVFGG-TDGMNPLKDLHILDTSTHTWISPSV-RGEGPEAREGHTAA 136
Query: 470 VYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPR 529
+ G+ ++ +FGG KS + S E Y DL L F +Q++ PP
Sbjct: 137 LIGK-RLFIFGGCGKSSN---DSDEVYYNDL-------YILNTETFVWKRAQTSGTPPTA 185
Query: 530 LDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ--PPKFAWGHS 587
D S +II+ GG A + S + +LD + WR LN GQ PP+ GH+
Sbjct: 186 RDSHTCSSWKNKIIVIGGEDAYDYYLSDVHILDA--DTLVWRELNASGQMLPPRA--GHT 241
Query: 588 TCVVGGTRVLVLGGHTGEEWVLNELHEL 615
T V G + V GG T + + ++LH L
Sbjct: 242 T-VAFGKNLFVFGGFTDAQNLYDDLHML 268
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
W + ++G+ R + S G+ L +FGG M P+ D +L D + W SV
Sbjct: 66 TWNEPMIKGSPPTPRDSHSCTTVGDNLFVFGGTD-GMNPLKDLHIL--DTSTHTWISPSV 122
Query: 352 KSS-PPGRWGHTLSSLNGSWLVVFGGCGRQG------LLNDVFVLDLDAKQPTWIEV-SG 403
+ P R GHT ++L G L +FGGCG+ ND+++L+ + W +
Sbjct: 123 RGEGPEAREGHT-AALIGKRLFIFGGCGKSSNDSDEVYYNDLYILNTETF--VWKRAQTS 179
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSP-PS 462
G PP R H +C +K++V GG LSD ++LD D +WRE+ S P
Sbjct: 180 GTPPTARDSH-TCSSWKNKIIVIGGEDAYDYYLSDVHILD--ADTLVWRELNASGQMLPP 236
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHL 488
R GH+ +G+ + +FGG + +L
Sbjct: 237 RAGHTTVAFGKN-LFVFGGFTDAQNL 261
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE---WRR 348
W +VRG +R +A G RL +FGG G + D+ + +L N E W+R
Sbjct: 116 TWISPSVRGEGPEAREGHTAALIGKRLFIFGGCGKSSNDSDEVYYNDLYILNTETFVWKR 175
Query: 349 VSVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPP 407
+PP R HT SS +V+ G L+DV +LD D W E++
Sbjct: 176 AQTSGTPPTARDSHTCSSWKNKIIVIGGEDAYDYYLSDVHILDADTL--VWRELNASGQM 233
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS 462
LP + + G L V GG TDA L D ++LD D +W ++ + PS
Sbjct: 234 LPPRAGHTTVAFGKNLFVFGGFTDAQNLYDDLHMLD--ADTGLWTKVLATGDGPS 286
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 7/158 (4%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
E W++ G +R + + + N++++ GGE + D + LDA WR
Sbjct: 169 ETFVWKRAQTSGTPPTARDSHTCSSWKNKIIVIGGEDAYDYYLSDVHI--LDADTLVWRE 226
Query: 349 VSVKSSP-PGRWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
++ P R GHT + G L VFGG Q L +D+ +LD D T + +G P
Sbjct: 227 LNASGQMLPPRAGHTTVAF-GKNLFVFGGFTDAQNLYDDLHMLDADTGLWTKVLATGDGP 285
Query: 407 PLPRSWHSSCI--IEGSKLVVSGGCTDAGVLLSDTYLL 442
S + +G LV GGC L D Y L
Sbjct: 286 SARFSVAGDILDPQKGGVLVFVGGCNKTLEALDDMYYL 323
>gi|383619882|ref|ZP_09946288.1| PAS/PAC sensor protein [Halobiforma lacisalsi AJ5]
gi|448696567|ref|ZP_21697979.1| PAS/PAC sensor protein [Halobiforma lacisalsi AJ5]
gi|445783195|gb|EMA34030.1| PAS/PAC sensor protein [Halobiforma lacisalsi AJ5]
Length = 1462
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 40 ELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD 99
EL LK L Y P + D +PD PI+Y N+ FE TGY E LGRNCRFLQ +
Sbjct: 327 ELRLKTRTLEY--APIGVTITDPDEPDNPIVYANEEFERLTGYSPAEYLGRNCRFLQGEE 384
Query: 100 PRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTH 159
DP + E+R +E + EL N++ DGTP NR+ + P+ D+DG VTH
Sbjct: 385 ---------TDPERIGELREAVEAAEQTTVELRNYRADGTPFWNRVTVTPLEDEDGAVTH 435
Query: 160 IIGIQ 164
+G Q
Sbjct: 436 FVGFQ 440
>gi|297734075|emb|CBI15322.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 128/268 (47%), Gaps = 26/268 (9%)
Query: 353 SSPPGRWGHTLSSLN-GSWLVVFGGCGRQGL-LNDVFVLDLDAKQPTWIE-VSGGAPPLP 409
S P RWGHT +++ G L +FGG G+ N V V D K TW E + G+PP P
Sbjct: 22 SGPGKRWGHTCNAIKGGKLLYIFGGYGKDNCQTNQVHVFDTVKK--TWNEPMIKGSPPTP 79
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLS 469
R H SC G L V GG TD L D ++LD +T + + P +R GH+ +
Sbjct: 80 RDSH-SCTTVGDNLFVFGG-TDGMNPLKDLHILDTSTHTWISPSV-RGEGPEAREGHTAA 136
Query: 470 VYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPR 529
+ G+ ++ +FGG KS + S E Y DL L F +Q++ PP
Sbjct: 137 LIGK-RLFIFGGCGKSSN---DSDEVYYNDL-------YILNTETFVWKRAQTSGTPPTA 185
Query: 530 LDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ--PPKFAWGHS 587
D S +II+ GG A + S + +LD + WR LN GQ PP+ GH+
Sbjct: 186 RDSHTCSSWKNKIIVIGGEDAYDYYLSDVHILDA--DTLVWRELNASGQMLPPRA--GHT 241
Query: 588 TCVVGGTRVLVLGGHTGEEWVLNELHEL 615
T V G + V GG T + + ++LH L
Sbjct: 242 T-VAFGKNLFVFGGFTDAQNLYDDLHML 268
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W + ++G+ R + S G+ L +FGG M P+ D +L D + W SV+
Sbjct: 67 WNEPMIKGSPPTPRDSHSCTTVGDNLFVFGGTD-GMNPLKDLHIL--DTSTHTWISPSVR 123
Query: 353 SS-PPGRWGHTLSSLNGSWLVVFGGCGRQG------LLNDVFVLDLDAKQPTWIEV-SGG 404
P R GHT ++L G L +FGGCG+ ND+++L+ + W + G
Sbjct: 124 GEGPEAREGHT-AALIGKRLFIFGGCGKSSNDSDEVYYNDLYILNTETF--VWKRAQTSG 180
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSP-PSR 463
PP R H +C +K++V GG LSD ++LD D +WRE+ S P R
Sbjct: 181 TPPTARDSH-TCSSWKNKIIVIGGEDAYDYYLSDVHILD--ADTLVWRELNASGQMLPPR 237
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHL 488
GH+ +G+ + +FGG + +L
Sbjct: 238 AGHTTVAFGKN-LFVFGGFTDAQNL 261
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 78/174 (44%), Gaps = 8/174 (4%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE---WRRV 349
W +VRG +R +A G RL +FGG G + D+ + +L N E W+R
Sbjct: 117 WISPSVRGEGPEAREGHTAALIGKRLFIFGGCGKSSNDSDEVYYNDLYILNTETFVWKRA 176
Query: 350 SVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPL 408
+PP R HT SS +V+ G L+DV +LD D W E++ L
Sbjct: 177 QTSGTPPTARDSHTCSSWKNKIIVIGGEDAYDYYLSDVHILDADTL--VWRELNASGQML 234
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS 462
P + + G L V GG TDA L D ++LD D +W ++ + PS
Sbjct: 235 PPRAGHTTVAFGKNLFVFGGFTDAQNLYDDLHMLD--ADTGLWTKVLATGDGPS 286
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 7/158 (4%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
E W++ G +R + + + N++++ GGE + D + LDA WR
Sbjct: 169 ETFVWKRAQTSGTPPTARDSHTCSSWKNKIIVIGGEDAYDYYLSDVHI--LDADTLVWRE 226
Query: 349 VSVKSSP-PGRWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
++ P R GHT + G L VFGG Q L +D+ +LD D T + +G P
Sbjct: 227 LNASGQMLPPRAGHTTVAF-GKNLFVFGGFTDAQNLYDDLHMLDADTGLWTKVLATGDGP 285
Query: 407 PLPRSWHSSCI--IEGSKLVVSGGCTDAGVLLSDTYLL 442
S + +G LV GGC L D Y L
Sbjct: 286 SARFSVAGDILDPQKGGVLVFVGGCNKTLEALDDMYYL 323
>gi|328866160|gb|EGG14546.1| Kelch repeat-containing protein [Dictyostelium fasciculatum]
Length = 921
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 151/344 (43%), Gaps = 53/344 (15%)
Query: 285 LTTLEAVC-WRKFTVRGAVEPS-RCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAA 342
L +LE WR T + + EP RC + G+ + LFGG Q ++D +D
Sbjct: 353 LQSLEMTAMWR--TEQCSNEPYPRCAHTCDTVGDYMYLFGGWTDENQMLNDMHRFKVDTW 410
Query: 343 NPEWRRVSVKS----------------SPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDV 386
EW + K + R GHTL++ N LV+FGG +G LND+
Sbjct: 411 --EWEEIHYKQQEKEQDKEISGYTTTFTITARNGHTLTTYNRQ-LVLFGGGSFEGFLNDI 467
Query: 387 FVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT 446
+ D D K+ + G PP RS HS+ ++ G+KL V GG D L +D + DL
Sbjct: 468 TIYDTDTKRWMVPQSITGTPPSGRSKHSASLVNGNKLYVFGG-GDGVRLHNDLFCFDLVK 526
Query: 447 DKPMWREIP---TSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
+ EI T+ +P R GHS+ TK+++FGG SG RL +
Sbjct: 527 LEWSLVEIKGNGTAAAPSPRWGHSMVTLNSTKLIVFGG--HSGSKRLNDVHVF------- 577
Query: 504 EPQWKQLECNAFTGVGSQSAVV---PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFL 560
E N ++ + + + P PR H A SM +++FGG H +
Sbjct: 578 -----DTETNIWSIINQSNQEIIFNPQPRAGHSA-SMIGDFMVVFGGGDG--HILNDFVG 629
Query: 561 LDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTG 604
LD K WRI P PP HS+CV+ ++++ GG G
Sbjct: 630 LDTRTWKW-WRI--TP--PPGGRCAHSSCVIRN-KLVIFGGGNG 667
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 44/228 (19%)
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT-----------DKPMWREIP 455
P PR H+ C G + + GG TD +L+D + + T +K +EI
Sbjct: 371 PYPRCAHT-CDTVGDYMYLFGGWTDENQMLNDMHRFKVDTWEWEEIHYKQQEKEQDKEIS 429
Query: 456 ---TSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQ-WKQLE 511
T+++ +R GH+L+ Y R ++++FGG + G L I + D + + W
Sbjct: 430 GYTTTFTITARNGHTLTTYNR-QLVLFGGGSFEGFLN-------DITIYDTDTKRW---- 477
Query: 512 CNAFTGVGSQSAVVPPP--RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPS 569
+ QS PP R H A + ++ +FGG G+ + LF D K
Sbjct: 478 ------MVPQSITGTPPSGRSKHSASLVNGNKLYVFGGG-DGVRLHNDLFCFDLV--KLE 528
Query: 570 WRILNVPGQ----PPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELH 613
W ++ + G P WGHS + T+++V GGH+G + LN++H
Sbjct: 529 WSLVEIKGNGTAAAPSPRWGHSMVTLNSTKLIVFGGHSGSKR-LNDVH 575
>gi|393777809|ref|ZP_10366099.1| putative signal transduction eal-ggdef domain transmembrane protein
[Ralstonia sp. PBA]
gi|392715108|gb|EIZ02692.1| putative signal transduction eal-ggdef domain transmembrane protein
[Ralstonia sp. PBA]
Length = 688
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
VVADA D P++YVN FE TGYRADEVLGRNCRFL + ++E
Sbjct: 147 IVVADALQEDLPLVYVNPAFEAMTGYRADEVLGRNCRFLHSTES---------GQAALNE 197
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R L E E + L NF+KDG +N+ L+P+R+ +G VTH +GIQ
Sbjct: 198 VRAALREQRETRVLLRNFRKDGQLFLNQFLLSPVRNAEGKVTHYVGIQ 245
>gi|224102759|ref|XP_002312790.1| predicted protein [Populus trichocarpa]
gi|222849198|gb|EEE86745.1| predicted protein [Populus trichocarpa]
Length = 923
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 76/141 (53%), Gaps = 12/141 (8%)
Query: 25 KCSFEGGGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRA 84
+ S E G GG LK L T +FVV+DA PD PI+Y + F TGY +
Sbjct: 118 RTSEEDGAGGVFPRVSQELKDALA---TLQQTFVVSDATKPDCPIMYASGGFFTMTGYSS 174
Query: 85 DEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNR 144
E++GRNCRFLQ D D V++IR ++ G + G LLN+KK+GTP N
Sbjct: 175 KEIIGRNCRFLQGAD---------TDRNEVAKIRDAVKNGTSYCGRLLNYKKNGTPFWNL 225
Query: 145 LRLAPIRDDDGTVTHIIGIQI 165
L + PI+DD G IG+Q+
Sbjct: 226 LTVTPIKDDRGNAIKFIGMQV 246
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PI + + F T Y +E+LGRNCRFLQ P D VS
Sbjct: 408 NFVITDPRLPDNPITFASDGFLELTEYTREEILGRNCRFLQ---------GPETDQSTVS 458
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 459 KIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 508
>gi|225428366|ref|XP_002280118.1| PREDICTED: phototropin-2 [Vitis vinifera]
Length = 1001
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA PD PI++ + F TGY + EV+GRNCRFLQ P D
Sbjct: 195 TLQQTFVVSDATKPDCPIMFASSGFFSMTGYTSKEVIGRNCRFLQ---------GPDTDE 245
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V++IR ++ G + G LLN+KKDGTP N L + PI+DD G V IG+Q+
Sbjct: 246 NEVAKIRNSVKTGNSYCGRLLNYKKDGTPFWNLLTITPIKDDKGNVIKFIGMQV 299
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D VS
Sbjct: 482 NFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQGTVS 532
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + + E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 533 KIRDAIRQQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 582
>gi|297744446|emb|CBI37708.3| unnamed protein product [Vitis vinifera]
Length = 979
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA PD PI++ + F TGY + EV+GRNCRFLQ P D
Sbjct: 173 TLQQTFVVSDATKPDCPIMFASSGFFSMTGYTSKEVIGRNCRFLQ---------GPDTDE 223
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V++IR ++ G + G LLN+KKDGTP N L + PI+DD G V IG+Q+
Sbjct: 224 NEVAKIRNSVKTGNSYCGRLLNYKKDGTPFWNLLTITPIKDDKGNVIKFIGMQV 277
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D VS
Sbjct: 460 NFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQGTVS 510
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + + E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 511 KIRDAIRQQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 560
>gi|255073407|ref|XP_002500378.1| predicted protein [Micromonas sp. RCC299]
gi|226515641|gb|ACO61636.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 101
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+ VADA D PI++ N F + TGY +EVLGRNCRFLQ P D V
Sbjct: 2 ALCVADATAKDQPIVFANDNFFVQTGYPPEEVLGRNCRFLQ---------GPGTDRETVR 52
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R + +G EF G L+N+ K+GT LVN L ++P+RD+ G VTH IGIQ
Sbjct: 53 AMREAIAKGKEFHGRLMNYHKNGTSLVNSLVMSPLRDEKGVVTHFIGIQ 101
>gi|19570333|dbj|BAA36192.2| PHY3 [Adiantum capillus-veneris]
Length = 1465
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 10/112 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
SF+V DA PDFPIIY + F TGY + EV+G NCRFLQ P +P V
Sbjct: 675 NSFIVVDALKPDFPIIYASTGFFNLTGYTSREVIGGNCRFLQ---------GPDTNPADV 725
Query: 115 SEIRRCLEEGI-EFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+ IR L +G F G LLN++KDG+ N L +API+DD G++ +IG+Q+
Sbjct: 726 ASIREALAQGTGTFCGRLLNYRKDGSSFWNLLTIAPIKDDLGSIVKLIGVQL 777
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ D PD PII+ + F T Y +EVLG NCRFLQ R D V
Sbjct: 930 SFVITDPRLPDNPIIFASDRFLELTEYTREEVLGNNCRFLQGRG---------TDRKAVQ 980
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR ++E + ++LN+ K G N L +RD++G V + IG+Q
Sbjct: 981 LIRDAVKEQRDVTVQVLNYTKGGRAFWNLFHLQVMRDENGDVQYFIGVQ 1029
>gi|399911275|ref|ZP_10779589.1| PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase [Halomonas sp. KM-1]
Length = 1328
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ADA P+IYVN+ FE TGY DEVLGR+C FLQ + DP V+
Sbjct: 773 IVIADARAEGKPVIYVNEAFERITGYGRDEVLGRSCSFLQGSE---------TDPEAVAS 823
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ + L E E L N++KDGTP N L LAP+RD +GTVTH +GIQ
Sbjct: 824 MGKALAERREINVTLCNYRKDGTPFWNNLYLAPVRDGEGTVTHFVGIQ 871
>gi|323449579|gb|EGB05466.1| hypothetical protein AURANDRAFT_30856 [Aureococcus anophagefferens]
Length = 331
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 155/343 (45%), Gaps = 49/343 (14%)
Query: 298 VRGAVEPSRCNFSACAAGNRLVLFGGE----GVNMQPMDDTFVLNLDAANPEWRRVSVKS 353
+ G +R +A A N++V+FGG G N +DT+VL D N W +V
Sbjct: 9 IDGDRPSARGGHTATMAENQIVIFGGSCYTTGGNFAYYNDTYVL--DTENRLWHKVQCSG 66
Query: 354 -SPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS-GGAPPLPRS 411
+PP R+GH++ L GS + VFGG G G L D LDL + TW+ VS A P PR
Sbjct: 67 DAPPPRYGHSVE-LVGSRMFVFGGRGESGALRDTSFLDL--VEWTWVPVSVTSASPSPRF 123
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSLSV 470
+H+S ++ G K+V+ GG + D ++ + +D W + ++ PS R GH+L +
Sbjct: 124 FHASLLV-GRKIVIHGGWDGRTHCMGDLWVFN--SDTFTWVQPKSAGILPSPRYGHTLDL 180
Query: 471 YGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW----KQL--ECNAFTGVGSQSAV 524
++L +GG + L D P++ +QL E +T +
Sbjct: 181 LSDGRILCYGGC--------------NVSLKDPVPEYYNDLRQLDTETMIWTKPAIGGSC 226
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLH--------SPSQLFLLDPSEEKPS----WRI 572
P R H M G + G I GL + S FL S+ S W +
Sbjct: 227 PPSKRYGHATAHMDFGLALFGGWGIGGLQNMGCKQKGAGSFYFLKVTSDGTGSNTNEWIL 286
Query: 573 LNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHEL 615
+ P P +GH+ VGGT + + GG G++ ++L EL
Sbjct: 287 PHAPATLPMHKYGHTMTTVGGT-LYIFGGWNGKQ-ATSDLIEL 327
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 115/281 (40%), Gaps = 43/281 (15%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
E W K G P R S G+R+ +FGG G + D +F LD W
Sbjct: 55 ENRLWHKVQCSGDAPPPRYGHSVELVGSRMFVFGGRGESGALRDTSF---LDLVEWTWVP 111
Query: 349 VSVKSSPPGRWGHTLSSLNGSWLVVFGGC-GRQGLLNDVFVLDLDAKQPTWIE-VSGGAP 406
VSV S+ P S L G +V+ GG GR + D++V + D TW++ S G
Sbjct: 112 VSVTSASPSPRFFHASLLVGRKIVIHGGWDGRTHCMGDLWVFNSDTF--TWVQPKSAGIL 169
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTY------LLDLTTDKPMWRE--IPTSW 458
P PR H+ ++ +++ GGC V L D L L T+ +W + I S
Sbjct: 170 PSPRYGHTLDLLSDGRILCYGGCN---VSLKDPVPEYYNDLRQLDTETMIWTKPAIGGSC 226
Query: 459 SPPSRLGHS-------LSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDL-----GDEEPQ 506
P R GH+ L+++G + GGL G + +G Y + + G +
Sbjct: 227 PPSKRYGHATAHMDFGLALFGGWGI---GGLQNMGCKQKGAGSFYFLKVTSDGTGSNTNE 283
Query: 507 WKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG 547
W + A +P + H ++ G + IFGG
Sbjct: 284 WI---------LPHAPATLPMHKYGHTMTTV-GGTLYIFGG 314
>gi|206602037|gb|EDZ38519.1| Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Leptospirillum sp. Group II '5-way CG']
Length = 1035
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 66/115 (57%), Gaps = 9/115 (7%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ ++ S + DA PDFPII+ N +F TGY E +G+NCRFLQ D + R
Sbjct: 354 FESSTASLCICDALQPDFPIIFANDMFFRLTGYSRAETVGKNCRFLQGADREQKSR---- 409
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+EIR L+ G + + N++ DGTP +N L L PI D DGTVTH +GIQ
Sbjct: 410 -----TEIREALKAGKAIRTLIRNYRMDGTPFMNELSLFPITDPDGTVTHYLGIQ 459
>gi|448407059|ref|ZP_21573486.1| PAS sensor protein [Halosimplex carlsbadense 2-9-1]
gi|445676272|gb|ELZ28795.1| PAS sensor protein [Halosimplex carlsbadense 2-9-1]
Length = 1794
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 65/113 (57%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ P VAD +PD P++ VN FE TGY E LGRNCRFLQ D D
Sbjct: 108 SAPVGITVADVTEPDEPLVSVNDRFEALTGYEESECLGRNCRFLQGED---------TDE 158
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ +RR +++ E EL N++ DGT NR+R+AP+ +D+G VTH +G Q
Sbjct: 159 EAVARLRRAVDDEAETTVELRNYRADGTEFWNRVRVAPVENDEGEVTHYVGFQ 211
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 49 FYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPL 108
F T+P V A DPD + N E G+ A+ VLG +P +P
Sbjct: 857 FVETSPVGVV---ATDPDGRVTLWNDAMEEIFGWSAEAVLG---------EP-----YPA 899
Query: 109 V--DPVVVSEIRRCLEEGIEF-QGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIG-IQ 164
V D EIR+ + EG F Q E +KDG + L PIRDD+G VT ++G I+
Sbjct: 900 VPADREGDDEIRQRVLEGESFTQIERERVRKDGERIDISLSTTPIRDDEGAVTEVVGYIE 959
Query: 165 IFSEAK 170
+E K
Sbjct: 960 DITERK 965
>gi|255546656|ref|XP_002514387.1| serine/threonine protein kinase, putative [Ricinus communis]
gi|223546484|gb|EEF47983.1| serine/threonine protein kinase, putative [Ricinus communis]
Length = 984
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD PI+Y + F TGY + EV+GRNCRFLQ P D V
Sbjct: 189 TFVVSDATKPDCPIMYASSGFFTMTGYSSKEVIGRNCRFLQ---------GPETDEKEVE 239
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ G + G LLN+KKDGTP N L + PI+DD G IG+Q+
Sbjct: 240 KIRDAVKSGQSYCGRLLNYKKDGTPFWNLLTVTPIKDDRGNTIKFIGMQV 289
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D VS
Sbjct: 461 NFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDLATVS 511
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 512 KIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 561
>gi|149286422|gb|ABR23226.1| hisactophilin C49S mutant/hisactophilin/phototropin PHY3 fusion
protein [Expression vector
pNCO-HISACT-(C49S)-ASLOV1-syn]
Length = 245
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA P PI+Y + F TGY + EV+GRNCRFLQ DP ++
Sbjct: 138 TFVVSDASRPGHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPAEIA 188
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR+ L G + G +LN+KKDGT N L +API+D++G V IG+Q+
Sbjct: 189 KIRQALANGSNYCGRVLNYKKDGTAFWNLLTIAPIKDEEGRVLKFIGMQV 238
>gi|401782494|dbj|BAM36550.1| phototropin 2 [Fragaria x ananassa]
Length = 944
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA PD PI+Y + F TGY + EV+GRNCRFLQ P D
Sbjct: 150 TLQQTFVVSDATKPDCPIMYTSSGFFTMTGYSSKEVIGRNCRFLQ---------GPETDQ 200
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VS+IR ++ G + G L N+KKDGTP N L + PI+DD G IG+Q+
Sbjct: 201 NEVSKIRNAVKTGSSYCGRLYNYKKDGTPFWNLLTVTPIKDDTGKTIKFIGMQV 254
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 421 NFVISDPRIPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQATVQ 471
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 472 KIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQL 521
>gi|168025773|ref|XP_001765408.1| PHOTA3 phototropin photoreceptor [Physcomitrella patens subsp.
patens]
gi|162683461|gb|EDQ69871.1| PHOTA3 phototropin photoreceptor [Physcomitrella patens subsp.
patens]
Length = 1069
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI++ + F TGY +E++G+NCRFLQ P D V+
Sbjct: 264 TFVVSDATQPDYPIMFASACFLSMTGYSENEIIGQNCRFLQ---------GPQTDRTSVA 314
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR L++G F G LLN+KKDG+ N L L PIR D G V IG+Q+
Sbjct: 315 KIRDALKQGRNFCGRLLNYKKDGSTFWNLLNLTPIRGDHGRVIMYIGMQV 364
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 13/120 (10%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +EVLGRNCRFLQ P +P V
Sbjct: 531 NFVITDPRLPDNPIIFASDEFLDLTEYSREEVLGRNCRFLQ---------GPETNPETVK 581
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI----FSEAKI 171
+IR + +G + +LLN+ K G P N L +RD G + + IG+Q+ +SEA +
Sbjct: 582 QIRDSVADGKDITVQLLNYTKSGKPFWNLFHLQTVRDHQGELQYFIGLQLNGRDYSEAPL 641
>gi|129560444|dbj|BAF48778.1| LOV domain-containing protein [Marchantia polymorpha]
gi|129560446|dbj|BAF48779.1| LOV domain-containing protein [Marchantia polymorpha]
Length = 712
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV DA + ++PI+Y + F TGY A EV+GRNCRFLQ + D ++
Sbjct: 287 AFVVCDALNAEYPILYASAGFFSMTGYTAKEVVGRNCRFLQGQ---------YTDAHDIA 337
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR L EG + G+LLN+KKDG+P N L ++PIRDD G + IG+Q
Sbjct: 338 MIRGALREGNIYTGKLLNYKKDGSPFWNLLTISPIRDDGGRLIKYIGMQ 386
>gi|334121164|ref|ZP_08495238.1| PAS/PAC sensor signal transduction histidine kinase [Microcoleus
vaginatus FGP-2]
gi|333455450|gb|EGK84099.1| PAS/PAC sensor signal transduction histidine kinase [Microcoleus
vaginatus FGP-2]
Length = 1113
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +ADA PD PI+Y N FE TGY E++G+NCRFLQ P D
Sbjct: 37 ATSNGIAIADATRPDKPIVYCNGAFERITGYDRSEIIGQNCRFLQ---------GPDTDG 87
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI------ 165
V +IR L+E + + L N++KDGTP N L ++P+RD G VTH IG+Q
Sbjct: 88 AAVDQIRVALKEQHDCKVVLKNYRKDGTPFWNELTISPVRDSSGIVTHFIGVQADITDRK 147
Query: 166 FSEAKIDLNHVSYPVFKENCNQQYDQSA---QYFSGGHS 201
+E + Y EN + Q+A +Y S +
Sbjct: 148 QAEEALKQAEAKYRSIFENATEGIFQTAPDGRYLSANQA 186
>gi|224132474|ref|XP_002328288.1| predicted protein [Populus trichocarpa]
gi|222837803|gb|EEE76168.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 25 KCSFEGGGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRA 84
+ S E GG LK L T +FVV+DA PD+PI++ + F TGY +
Sbjct: 51 RTSEESEAGGTVPRVSQELKNAL---ATLQQTFVVSDATKPDYPIMFASSGFFTMTGYSS 107
Query: 85 DEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNR 144
EV+GRNCRFLQ D V++IR ++ G + G LLN+KK+GTP N
Sbjct: 108 KEVIGRNCRFLQ---------GAGTDQNEVAKIRDAVKNGTSYCGRLLNYKKNGTPFWNL 158
Query: 145 LRLAPIRDDDGTVTHIIGIQI 165
L + PI+DD G IG+Q+
Sbjct: 159 LTVTPIKDDRGNTIKFIGMQV 179
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D VS
Sbjct: 349 NFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQATVS 399
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
++R + E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 400 KVRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 449
>gi|356559155|ref|XP_003547866.1| PREDICTED: phototropin-2-like [Glycine max]
Length = 990
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA PD PI+Y + F TGY + E++GRNCRFLQ P D
Sbjct: 190 TLQQTFVVSDATKPDCPIMYASSGFFTMTGYSSKEIIGRNCRFLQ---------GPETDK 240
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V++IR G + G LLN+KKDGTP N L + PI+DD G IG+Q+
Sbjct: 241 NEVAKIRDATRNGRSYCGRLLNYKKDGTPFWNLLTITPIKDDHGNTIKFIGMQV 294
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++D PD PII+ + F T Y +E+LGRNCRFLQ P D VS
Sbjct: 468 NFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQATVS 518
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR + E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 519 RIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 568
>gi|6688928|emb|CAB65325.1| non-phototropic hypocotyl NPH1 [Oryza sativa Indica Group]
Length = 921
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA P+ PI+Y + F TGY + EV+GRNCRFLQ DP +
Sbjct: 137 TFVVSDATRPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPHEID 187
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR+ L G + G +LN+KKDGTP N L +API+D+DG + IG+Q+
Sbjct: 188 KIRQALANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQV 237
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D +V
Sbjct: 414 NFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQ---------GPETDRAIVR 464
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 465 KIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 514
>gi|449475890|ref|XP_004154580.1| PREDICTED: phototropin-2-like [Cucumis sativus]
Length = 629
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 78/149 (52%), Gaps = 14/149 (9%)
Query: 17 IQGSGKRQKCSFEGGGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVF 76
I GSG+ SF G LK L T FVV+DA PD PI+Y + F
Sbjct: 93 ISGSGR--TSSFSNETSGVFPRVSQELKDALASLEQT---FVVSDATKPDCPIVYASSGF 147
Query: 77 EIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKK 136
TGY ++EV+GRNCRFLQ + D V +IR ++ G + G LLN+KK
Sbjct: 148 FGMTGYASEEVIGRNCRFLQGSE---------TDQKEVDKIRYAVKNGKSYCGRLLNYKK 198
Query: 137 DGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+GTP N L + PI+DD+G IG+Q+
Sbjct: 199 NGTPFWNLLTVTPIKDDNGNTIKFIGMQV 227
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D VS
Sbjct: 399 NFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQETVS 449
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E E +L+N+ K G N L P+RD+ G + + IG+Q+
Sbjct: 450 KIRDAIREQREITVQLINYTKTGKKFWNLFHLQPMRDETGELQYFIGVQL 499
>gi|356526675|ref|XP_003531942.1| PREDICTED: phototropin-2-like [Glycine max]
Length = 996
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA PD PI+Y + F TGY + E++GRNCRFLQ P D
Sbjct: 195 TLQQTFVVSDATKPDCPIMYASSGFFTMTGYSSKEIIGRNCRFLQ---------GPETDK 245
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V++IR G + G LLN+KKDGTP N L + PI+DD G IG+Q+
Sbjct: 246 NEVAKIRDATRNGRSYCGRLLNYKKDGTPFWNLLTVTPIKDDHGNTIKFIGMQV 299
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++D PD PII+ + F T Y +E+LGRNCRFLQ P D VS
Sbjct: 474 NFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQATVS 524
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR + E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 525 RIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 574
>gi|448607640|ref|ZP_21659593.1| HTR-like protein [Haloferax sulfurifontis ATCC BAA-897]
gi|445737577|gb|ELZ89109.1| HTR-like protein [Haloferax sulfurifontis ATCC BAA-897]
Length = 640
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 38 DTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQY 97
+T LS++ + P V+ D D PI+Y N+ F TGYR +EV+GRNCRFLQ
Sbjct: 154 ETRLSVRERAM--DEAPVGIVLTDPHAADNPIVYANEQFADLTGYRIEEVMGRNCRFLQ- 210
Query: 98 RDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
+R D V+E+R +EE ELLN++KDGT NR+R+API DDDG V
Sbjct: 211 ----GER----TDEAAVAELRSAVEERRPVTTELLNYRKDGTEFWNRVRVAPIFDDDGAV 262
Query: 158 THIIGIQ 164
+G Q
Sbjct: 263 EFFVGFQ 269
>gi|162567476|ref|NP_419104.2| sensory box histidine kinase [Caulobacter crescentus CB15]
gi|221233226|ref|YP_002515662.1| photosensory histidine protein kinase LovK [Caulobacter crescentus
NA1000]
gi|160369950|gb|AAK22272.2| LOV histidine kinase LovK [Caulobacter crescentus CB15]
gi|220962398|gb|ACL93754.1| photosensory histidine protein kinase LovK [Caulobacter crescentus
NA1000]
Length = 368
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 70/135 (51%), Gaps = 15/135 (11%)
Query: 31 GGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGR 90
G G DD P T + +VADA PD PII+ N F TGY DEV+GR
Sbjct: 15 AAGHGVDD------PFAAAISATRMAMIVADATQPDIPIIFANDAFLRLTGYARDEVIGR 68
Query: 91 NCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPI 150
NCRFLQ P DP + +R L G + +LLN++KDG+P N L ++P+
Sbjct: 69 NCRFLQ---------GPDTDPKAIQAVRDALAAGEDVAVDLLNYRKDGSPFWNALNMSPV 119
Query: 151 RDDDGTVTHIIGIQI 165
R+D G + + G Q+
Sbjct: 120 RNDAGQLVYFFGSQV 134
>gi|326508020|dbj|BAJ86753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 75/134 (55%), Gaps = 12/134 (8%)
Query: 32 GGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRN 91
GGG L+ L + T FVV+DA P PI+Y + F TGY + EV+GRN
Sbjct: 112 AGGGIPRVSEELRAALSAFQQT---FVVSDASRPGHPIMYASAGFFNMTGYTSKEVVGRN 168
Query: 92 CRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR 151
CRFLQ DP +++IR+ L +G + G +LN+KKDGT N L +API+
Sbjct: 169 CRFLQGSG---------TDPAEIAKIRQALADGSNYCGRVLNYKKDGTAFWNLLTIAPIK 219
Query: 152 DDDGTVTHIIGIQI 165
D+DG V IG+Q+
Sbjct: 220 DEDGRVLKFIGMQV 233
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 410 NFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQ---------GPETDRATVR 460
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 461 KIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 510
>gi|312282323|dbj|BAJ34027.1| unnamed protein product [Thellungiella halophila]
Length = 997
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 74/136 (54%), Gaps = 12/136 (8%)
Query: 30 GGGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLG 89
GG GG LK L + T FVV+DA PD+PI+Y + F TGY + EV+G
Sbjct: 174 AGGRGGIPRVSEDLKDALSTFQQT---FVVSDATKPDYPIMYASAGFFNMTGYTSKEVVG 230
Query: 90 RNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAP 149
RNCRFLQ A +++IR L G + G LLN+KKDGT N L +AP
Sbjct: 231 RNCRFLQGSGTDADE---------LAKIRETLAAGNNYCGRLLNYKKDGTSFWNLLTIAP 281
Query: 150 IRDDDGTVTHIIGIQI 165
I+D+ G V IG+Q+
Sbjct: 282 IKDESGKVLKFIGMQV 297
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V
Sbjct: 475 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPTTVK 525
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 526 KIRAAIDNQTEVTVQLINYTKSGKKFWNIFHLQPMRDQKGEVQYFIGVQL 575
>gi|448605763|ref|ZP_21658389.1| bacterio-opsin activator [Haloferax sulfurifontis ATCC BAA-897]
gi|445741789|gb|ELZ93288.1| bacterio-opsin activator [Haloferax sulfurifontis ATCC BAA-897]
Length = 606
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 63/112 (56%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
P VAD PD P++YVN+ FE TGY AD LGRNCR+LQ P DP
Sbjct: 89 APVGITVADCSLPDRPLVYVNEAFETMTGYSADAALGRNCRYLQ---------GPNTDPA 139
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+RR +E ELLN++ +G NR+ +AP+ DG VTH +G Q
Sbjct: 140 RVAELRRAIEAEESASVELLNYRANGETFWNRVDVAPLSGPDGEVTHYVGFQ 191
>gi|292656157|ref|YP_003536054.1| HTR-like protein [Haloferax volcanii DS2]
gi|448290154|ref|ZP_21481308.1| HTR-like protein [Haloferax volcanii DS2]
gi|291370178|gb|ADE02405.1| HTR-like protein [Haloferax volcanii DS2]
gi|445580156|gb|ELY34544.1| HTR-like protein [Haloferax volcanii DS2]
Length = 652
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P V+ D D PI+YVN F TGY DEVLGRNCRFLQ D
Sbjct: 191 PIGIVLTDPSQTDNPIVYVNDEFTALTGYSRDEVLGRNCRFLQ---------GEATDEDA 241
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+R ++E ELLN++KDGT NR+R+AP+ DDDG + +G Q
Sbjct: 242 VAELRAAVDEREAVTTELLNYRKDGTEFWNRVRIAPLFDDDGVIDFFVGFQ 292
>gi|449444602|ref|XP_004140063.1| PREDICTED: phototropin-2-like [Cucumis sativus]
Length = 921
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 78/149 (52%), Gaps = 14/149 (9%)
Query: 17 IQGSGKRQKCSFEGGGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVF 76
I GSG+ SF G LK L T FVV+DA PD PI+Y + F
Sbjct: 93 ISGSGR--TSSFSNETSGVFPRVSQELKDALASLEQT---FVVSDATKPDCPIVYASSGF 147
Query: 77 EIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKK 136
TGY ++EV+GRNCRFLQ + D V +IR ++ G + G LLN+KK
Sbjct: 148 FGMTGYASEEVIGRNCRFLQGSE---------TDQKEVDKIRYAVKNGKSYCGRLLNYKK 198
Query: 137 DGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+GTP N L + PI+DD+G IG+Q+
Sbjct: 199 NGTPFWNLLTVTPIKDDNGNTIKFIGMQV 227
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D VS
Sbjct: 399 NFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQETVS 449
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + E E +L+N+ K G N L P+RD+ G + + IG+Q+
Sbjct: 450 KIRDAIREQREITVQLINYTKTGKKFWNLFHLQPMRDETGELQYFIGVQL 499
>gi|397620892|gb|EJK65981.1| hypothetical protein THAOC_13120 [Thalassiosira oceanica]
Length = 535
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 82/168 (48%), Gaps = 29/168 (17%)
Query: 10 EEEGEGVIQGSGKRQKCSFEGGGGGGG-------------DDTELSLKPGLLFYPTTPTS 56
E+E E ++ +Q + GGGG DD + S L T +
Sbjct: 349 EKEAEALL----NKQALADAASSGGGGLIANNKSDANRVLDDPDFSFIKALQ---TAQQN 401
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
FVV D PD PI+Y + F TGY D+VLGRNCRFLQ P DP V +
Sbjct: 402 FVVTDPSLPDNPIVYATQGFLNLTGYTLDQVLGRNCRFLQ---------GPETDPKAVEK 452
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR +EEG + LLN++ DGT N+ +A +RD G +T+ +G+Q
Sbjct: 453 IRNAIEEGSDMSVCLLNYRVDGTTFWNQFFIAALRDAGGNITNYVGVQ 500
>gi|75910072|ref|YP_324368.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
[Anabaena variabilis ATCC 29413]
gi|75703797|gb|ABA23473.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Anabaena variabilis ATCC 29413]
Length = 1021
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ DA PD PIIYVN+ FE TGY A EV+G+NCRFLQ + D + +SE
Sbjct: 215 IVLTDANQPDNPIIYVNQAFEAMTGYSAGEVIGQNCRFLQANE---------TDQLSLSE 265
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R L+E E + NF+KDGT N L +AP+ D G +TH IG+Q
Sbjct: 266 LRSALQEKKECHVVIKNFRKDGTEFWNELYIAPVFDSCGQLTHFIGVQ 313
>gi|254410683|ref|ZP_05024462.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
gi|196182889|gb|EDX77874.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
Length = 483
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 64/108 (59%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ADA PD P+IYVN FE TGY EVLG NCRFLQ +D P VD +
Sbjct: 159 IVIADARLPDMPLIYVNPAFEEITGYSDAEVLGYNCRFLQGKDT----SQPAVD-----Q 209
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R ++ G LLN++KDGTP N L ++PI DD +TH +GIQ
Sbjct: 210 LRAAIKAGENCTVTLLNYRKDGTPFWNELTISPIYDDHNNLTHFVGIQ 257
>gi|428201366|ref|YP_007079955.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
[Pleurocapsa sp. PCC 7327]
gi|427978798|gb|AFY76398.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
[Pleurocapsa sp. PCC 7327]
Length = 965
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 64/106 (60%), Gaps = 9/106 (8%)
Query: 59 VADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIR 118
+ADA PD+PI+Y N FE TGY E +GRN RFLQ D +P V++IR
Sbjct: 578 IADATQPDYPIVYCNPAFEKMTGYSHSEAIGRNYRFLQGAD---------TEPDAVAQIR 628
Query: 119 RCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R L E E L N++KDG+P N L ++P++++ G VTH IG+Q
Sbjct: 629 RALHEQRECHVVLKNYRKDGSPFWNELTISPVQNEQGEVTHFIGLQ 674
>gi|429221706|ref|YP_007174032.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Deinococcus peraridilitoris DSM 19664]
gi|429132569|gb|AFZ69583.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Deinococcus peraridilitoris DSM 19664]
Length = 297
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 9/110 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
T+ ++ D DFPI+Y N FE TGY A E+LGRNCRFLQ P D
Sbjct: 19 TNGLIVTQADGDFPILYCNPAFETLTGYPASEILGRNCRFLQ---------GPGTDAYTR 69
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+++R L G+ +LN+++DGTP N L LAPI D+ G VTH +G+Q
Sbjct: 70 TQMREALCAGLSLDVVILNYRRDGTPFWNALNLAPIHDEQGRVTHFVGVQ 119
>gi|300868645|ref|ZP_07113257.1| putative Diguanylate kinase [Oscillatoria sp. PCC 6506]
gi|300333339|emb|CBN58449.1| putative Diguanylate kinase [Oscillatoria sp. PCC 6506]
Length = 1140
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ADA PD PIIY N FE TGY E+ G+NCRFLQ P DP + E
Sbjct: 72 IVIADARLPDCPIIYCNPAFERITGYSQAEIEGKNCRFLQ---------GPDTDPAALEE 122
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R L EG + L N++KDGT N+L ++P+RD G +TH IG+Q
Sbjct: 123 LRNALREGRACEVVLKNYRKDGTHFWNKLAISPVRDKKGQLTHFIGVQ 170
>gi|85709182|ref|ZP_01040248.1| sensory box histidine kinase [Erythrobacter sp. NAP1]
gi|85690716|gb|EAQ30719.1| sensory box histidine kinase [Erythrobacter sp. NAP1]
Length = 358
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 67/111 (60%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P S V+A A D PI+Y+N+ F TGY A+ +GRNCRFLQ D DP
Sbjct: 18 PFSMVLASATLEDQPILYINERFTAVTGYSAEMTVGRNCRFLQGDD---------TDPRS 68
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V++IR+ LE+G + +L N+K DGT NRL ++PIR+D G + +GIQ
Sbjct: 69 VAKIRQALEDGEDITVDLANYKADGTKFTNRLLISPIRNDVGDIVSFLGIQ 119
>gi|448547506|ref|ZP_21626927.1| HTR-like protein [Haloferax sp. ATCC BAA-645]
gi|445715876|gb|ELZ67628.1| HTR-like protein [Haloferax sp. ATCC BAA-645]
Length = 731
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P V+ D D PI+YVN F TGY DEVLGRNCRFLQ D
Sbjct: 268 PIGIVLTDPSQTDNPIVYVNDEFTTLTGYSRDEVLGRNCRFLQ---------GEATDEDA 318
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+R ++E ELLN++KDGT NR+R+AP+ DDDG + +G Q
Sbjct: 319 VAELRAAVDEREAVTTELLNYRKDGTEFWNRVRIAPLFDDDGVIDFFVGFQ 369
>gi|449453764|ref|XP_004144626.1| PREDICTED: phototropin-2-like [Cucumis sativus]
Length = 943
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
++V++DA PD+PI++ + F TGY DEV+GRNCRFLQ P D V+
Sbjct: 195 TYVISDATKPDYPIMFASNRFLAMTGYTLDEVIGRNCRFLQ---------GPETDKNEVA 245
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + +G + G+LLN+KK+GTP N L + P++D G + IG+Q+
Sbjct: 246 KIRHAIRKGNSYCGKLLNYKKNGTPFWNLLTVGPVKDSHGRIIRFIGMQV 295
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
F + + PD PII+ + F T Y +EVLGRN FLQ P D VS+
Sbjct: 426 FFITNPRLPDNPIIFASHRFLDSTEYTLEEVLGRNFCFLQ---------GPETDQATVSK 476
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDD-DGTVTHIIGIQI 165
I +EE E +++N+ K G N L P+ D G + + IG+QI
Sbjct: 477 INDAIEEQREITLQIINYTKSGKKFSNLFHLQPMCDQMKGELQYFIGVQI 526
>gi|427732263|ref|YP_007078500.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Nostoc sp. PCC 7524]
gi|427368182|gb|AFY50903.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Nostoc sp. PCC 7524]
Length = 1019
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 66/108 (61%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ DA PD PIIYVN FE TGY EV+GRNCRFLQ AQ D + + E
Sbjct: 215 IVLTDATQPDNPIIYVNPAFESITGYFVQEVIGRNCRFLQ---GNAQ------DQLGIEE 265
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R+ L+E E L N++KDGTP N L +AP+ DD G +T+ IG+Q
Sbjct: 266 LRKALQEQRECHVILKNYRKDGTPFWNELYIAPVFDDSGRLTNFIGVQ 313
>gi|224055599|ref|XP_002298559.1| predicted protein [Populus trichocarpa]
gi|222845817|gb|EEE83364.1| predicted protein [Populus trichocarpa]
Length = 977
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI+Y + F TGY + EV+GRNCRFLQ DP V+
Sbjct: 177 TFVVSDATKPDYPILYASAGFFKMTGYTSKEVIGRNCRFLQGAG---------TDPEDVA 227
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR L + G LLN+KKDG+P N L +API+DD G V IG+ +
Sbjct: 228 KIREALRGEGTYCGRLLNYKKDGSPFWNLLTIAPIKDDSGKVLKFIGMLV 277
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V
Sbjct: 458 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVR 508
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNH 175
+IR ++ + +L+N+ K G N L P+RD G V + IG+Q+ ++
Sbjct: 509 KIREAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHVEPRT 568
Query: 176 VSYP 179
S P
Sbjct: 569 NSIP 572
>gi|448540589|ref|ZP_21623599.1| HTR-like protein [Haloferax sp. ATCC BAA-646]
gi|445709223|gb|ELZ61055.1| HTR-like protein [Haloferax sp. ATCC BAA-646]
Length = 817
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P V+ D D PI+YVN F TGY DEVLGRNCRFLQ D
Sbjct: 320 PIGIVLTDPSQTDNPIVYVNDEFTTLTGYSRDEVLGRNCRFLQ---------GEATDEDA 370
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+R ++E ELLN++KDGT NR+R+AP+ DDDG + +G Q
Sbjct: 371 VAELRAAVDEREAVTTELLNYRKDGTEFWNRVRIAPLFDDDGVIDFFVGFQ 421
>gi|449525938|ref|XP_004169973.1| PREDICTED: phototropin-2-like [Cucumis sativus]
Length = 876
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
++V++DA PD+PI++ + F TGY DEV+GRNCRFLQ P D V+
Sbjct: 128 TYVISDATKPDYPIMFASNRFLAMTGYTLDEVIGRNCRFLQ---------GPETDKNEVA 178
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + +G + G+LLN+KK+GTP N L + P++D G + IG+Q+
Sbjct: 179 KIRHAIRKGNSYCGKLLNYKKNGTPFWNLLTVGPVKDSHGRIIRFIGMQV 228
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
F + + PD PII+ + F T Y +EVLGRN FLQ P D VS+
Sbjct: 359 FFITNPRLPDNPIIFASHRFLDSTEYTLEEVLGRNFCFLQ---------GPETDQATVSK 409
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDD-DGTVTHIIGIQI 165
I +EE E +++N+ K G N L P+ D G + + IG+QI
Sbjct: 410 INDAIEEQREITLQIINYTKSGKKFSNLFHLQPMCDQMKGELQYFIGVQI 459
>gi|292654498|ref|YP_003534395.1| putative bacterio-opsin activator [Haloferax volcanii DS2]
gi|448293499|ref|ZP_21483605.1| bacterio-opsin activator [Haloferax volcanii DS2]
gi|291372918|gb|ADE05145.1| Putative bacterio-opsin activator [Haloferax volcanii DS2]
gi|445570553|gb|ELY25113.1| bacterio-opsin activator [Haloferax volcanii DS2]
Length = 658
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P VAD PD P++YVN+ FE TGY AD LGRNCR+LQ P DP
Sbjct: 143 PVGITVADCSLPDRPLVYVNEAFETMTGYSADAALGRNCRYLQ---------GPNTDPER 193
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+RR +E ELLN++ +G NR+ +AP+ DG VTH +G Q
Sbjct: 194 VAELRRAIEAEESASVELLNYRANGETFWNRVDVAPLSGSDGEVTHYVGFQ 244
>gi|81300525|ref|YP_400733.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
[Synechococcus elongatus PCC 7942]
gi|81169406|gb|ABB57746.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Synechococcus elongatus PCC 7942]
Length = 1238
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 19/163 (11%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+T S ++ADA PD PIIYVN FE TG+ A EV+GRN RFLQ + +
Sbjct: 688 STGNSIIIADAQQPDMPIIYVNPAFEKITGFSAAEVIGRNFRFLQGLETQQAE------- 740
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI-FSEAK 170
+ E+RR LEEG + L +++KDG+ N++ LAP+RD G +TH++ Q SE+K
Sbjct: 741 --LEEMRRALEEGTYCEVTLRSYRKDGSLFWNQISLAPVRDQKGHLTHMVASQTDVSESK 798
Query: 171 ----IDLNHVSYPVFKENCNQ-----QYDQSAQYFSGGHSPLS 204
+ L ++ N+ + DQ+A GG SP++
Sbjct: 799 AFEEMLLQQATHDALTGLPNRLLFLDRLDQAAARARGGGSPIA 841
>gi|60099456|dbj|BAD89967.1| phototropin [Phaseolus vulgaris]
Length = 987
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD PI+Y + F TGY + EV+GRNCRFLQ + D V+
Sbjct: 169 TFVVSDATKPDCPILYASAGFFKMTGYTSKEVIGRNCRFLQGAE---------TDCGDVA 219
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR LE G + G LLN+KKDGTP N L + PI+D+DG V IG+ +
Sbjct: 220 KIREALEAGKIYCGRLLNYKKDGTPFWNLLTITPIKDEDGKVLKFIGMLV 269
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V
Sbjct: 465 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVR 515
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 516 KIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQL 565
>gi|56752384|ref|YP_173085.1| hypothetical protein syc2375_d [Synechococcus elongatus PCC 6301]
gi|56687343|dbj|BAD80565.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 1238
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 19/163 (11%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+T S ++ADA PD PIIYVN FE TG+ A EV+GRN RFLQ + +
Sbjct: 688 STGNSIIIADAQQPDMPIIYVNPAFEKITGFSAAEVIGRNFRFLQGLETQQAE------- 740
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI-FSEAK 170
+ E+RR LEEG + L +++KDG+ N++ LAP+RD G +TH++ Q SE+K
Sbjct: 741 --LEEMRRALEEGTYCEVTLRSYRKDGSLFWNQISLAPVRDQKGHLTHMVASQTDVSESK 798
Query: 171 ----IDLNHVSYPVFKENCNQ-----QYDQSAQYFSGGHSPLS 204
+ L ++ N+ + DQ+A GG SP++
Sbjct: 799 AFEEMLLQQATHDALTGLPNRLLFLDRLDQAAARARGGGSPIA 841
>gi|448569956|ref|ZP_21639039.1| HTR-like protein [Haloferax lucentense DSM 14919]
gi|448599646|ref|ZP_21655449.1| HTR-like protein [Haloferax alexandrinus JCM 10717]
gi|445723760|gb|ELZ75397.1| HTR-like protein [Haloferax lucentense DSM 14919]
gi|445736319|gb|ELZ87863.1| HTR-like protein [Haloferax alexandrinus JCM 10717]
Length = 725
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P V+ D D PI+YVN F TGY DEVLGRNCRFLQ D
Sbjct: 268 PIGIVLTDPSQTDNPIVYVNDEFTALTGYSRDEVLGRNCRFLQ---------GEATDEDA 318
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+R ++E ELLN++KDGT NR+R+AP+ DDDG + +G Q
Sbjct: 319 VAELRAAVDEREAVTTELLNYRKDGTEFWNRVRIAPLFDDDGVIDFFVGFQ 369
>gi|322435708|ref|YP_004217920.1| PAS/PAC sensor signal transduction histidine kinase [Granulicella
tundricola MP5ACTX9]
gi|321163435|gb|ADW69140.1| PAS/PAC sensor signal transduction histidine kinase [Granulicella
tundricola MP5ACTX9]
Length = 507
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 9/116 (7%)
Query: 49 FYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPL 108
+ + + VA+A +PD P++YVN FE+ TGY +EV G+NCRFLQ + + P
Sbjct: 155 IFRSVTSGISVANAKEPDLPLVYVNPAFEVMTGYSLEEVQGKNCRFLQ----KGETEQP- 209
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++ IR L G E L N++KDGT N L L+PIR+ DG +TH +GIQ
Sbjct: 210 ----GLTLIREALAAGREVVAILRNYRKDGTVFWNELSLSPIRNRDGELTHFVGIQ 261
>gi|433420630|ref|ZP_20405566.1| HTR-like protein, partial [Haloferax sp. BAB2207]
gi|432199115|gb|ELK55325.1| HTR-like protein, partial [Haloferax sp. BAB2207]
Length = 646
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P V+ D D PI+YVN F TGY DEVLGRNCRFLQ D
Sbjct: 268 PIGIVLTDPSQTDNPIVYVNDEFTALTGYSRDEVLGRNCRFLQ---------GEATDEDA 318
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+R ++E ELLN++KDGT NR+R+AP+ DDDG + +G Q
Sbjct: 319 VAELRAAVDEREAVTTELLNYRKDGTEFWNRVRIAPLFDDDGVIDFFVGFQ 369
>gi|357517333|ref|XP_003628955.1| Phototropin [Medicago truncatula]
gi|355522977|gb|AET03431.1| Phototropin [Medicago truncatula]
Length = 941
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA PD PI+Y + F TGY + EV+GRNCRFLQ P D
Sbjct: 124 TLQQTFVVSDATKPDCPILYASSGFFSMTGYSSKEVIGRNCRFLQ---------GPETDQ 174
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V++IR + G + G LLN+KK+GTP N L + PI+DD G IG+Q+
Sbjct: 175 NEVAKIRDATKNGKSYCGRLLNYKKNGTPFWNLLTVTPIKDDRGNTIKFIGMQV 228
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++D PD PII+ + F T Y +E+LGRNCRFLQ P D V+
Sbjct: 412 NFVISDPRLPDCPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQATVN 462
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR +++ E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 463 RIRDAIKDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 512
>gi|448582617|ref|ZP_21646121.1| bacterio-opsin activator [Haloferax gibbonsii ATCC 33959]
gi|445732265|gb|ELZ83848.1| bacterio-opsin activator [Haloferax gibbonsii ATCC 33959]
Length = 658
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P VAD PD P++YVN+ FE TGY AD LGRNCR+LQ P DP
Sbjct: 143 PVGITVADCSLPDRPLVYVNEAFEAMTGYSADAALGRNCRYLQ---------GPNTDPER 193
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+RR +E ELLN++++G NR+ +AP+ DG VTH +G Q
Sbjct: 194 VAELRRAIEAEESASVELLNYRENGETFWNRVDVAPLSGPDGEVTHYVGFQ 244
>gi|229819115|ref|YP_002880641.1| PAS/PAC sensor protein [Beutenbergia cavernae DSM 12333]
gi|229565028|gb|ACQ78879.1| putative PAS/PAC sensor protein [Beutenbergia cavernae DSM 12333]
Length = 580
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 9/118 (7%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
S VV DA + D PI++VN+ F TGY D LGRNCRFLQ P DP V
Sbjct: 16 VSIVVTDAREDDEPIVWVNEAFTRTTGYARDAALGRNCRFLQ---------GPATDPAAV 66
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
+ + + LLN++ DGTP N + ++P+RDD G VTH +G+Q+ A+ D
Sbjct: 67 ARLGLAVRADEPVAAALLNYRPDGTPFWNDVSISPVRDDAGAVTHHVGVQVDVTARAD 124
>gi|448622505|ref|ZP_21669199.1| bacterio-opsin activator [Haloferax denitrificans ATCC 35960]
gi|445754587|gb|EMA05992.1| bacterio-opsin activator [Haloferax denitrificans ATCC 35960]
Length = 659
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 63/112 (56%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
P VAD PD P++YVN+ FE TGY AD LGRNCR+LQ P DP
Sbjct: 142 APVGITVADCSLPDRPLVYVNEAFETMTGYSADAALGRNCRYLQ---------GPNTDPE 192
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+RR +E ELLN++ +G NR+ +AP+ DG VTH +G Q
Sbjct: 193 RVAELRRAIEAEESASVELLNYRANGETFWNRVDVAPLSGPDGEVTHYVGFQ 244
>gi|428309474|ref|YP_007120451.1| PAS domain-containing protein [Microcoleus sp. PCC 7113]
gi|428251086|gb|AFZ17045.1| PAS domain S-box [Microcoleus sp. PCC 7113]
Length = 494
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ADA PD PI YVN FE TGY+A+EV+GRNCRFLQ +D D ++E
Sbjct: 170 IVIADARKPDMPITYVNPAFERLTGYQAEEVVGRNCRFLQGKD---------TDQPALNE 220
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R + EG + L N++K+GT N L ++PI D +G +TH +GIQ
Sbjct: 221 LREAIREGKGCKVILSNYRKNGTLFWNELSVSPIYDAEGNLTHFVGIQ 268
>gi|253750646|gb|ACT35019.1| phytochrome 3 [Pronephrium lakhimpurense]
Length = 1438
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 68/113 (60%), Gaps = 11/113 (9%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
TSFVV DA PD PII+ + F TGY + EV+G NCRFLQ P +P +
Sbjct: 671 TSFVVVDALKPDLPIIFASTGFFNLTGYTSREVIGGNCRFLQ---------GPETNPEDI 721
Query: 115 SEIRRCL--EEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+ IR L + G F G LLN++KDG+ N L +API+DD GT+ +IG+Q+
Sbjct: 722 ASIREALVPQGGGTFCGRLLNYRKDGSSFWNLLTIAPIKDDSGTIVKLIGVQL 774
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ D PD PII+ + F TGY +EVLG NCR LQ +D DP V
Sbjct: 940 SFVITDPRLPDNPIIFASDQFLELTGYSREEVLGENCRLLQGQD---------TDPKAVQ 990
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR +E G + LLN+ + G P N L +RD G + + IG+Q
Sbjct: 991 LIRDAVEGGRDVTVHLLNYTRSGRPFWNLFHLQAMRDKKGNLQYFIGVQ 1039
>gi|60099458|dbj|BAD89968.1| phototropin [Phaseolus vulgaris]
Length = 996
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA PD PI+Y + F TGY + E++GRNCRFLQ P D
Sbjct: 193 TLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEIIGRNCRFLQ---------GPDTDK 243
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +IR + G + G LLN+KK+GTP N L + PI+DD G IG+Q+
Sbjct: 244 NEVDKIRDAIRNGRSYCGRLLNYKKNGTPFWNLLTVTPIKDDKGNTIKFIGMQV 297
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++D PD PII+ + F T Y +E+LGRNCRFLQ P D VS
Sbjct: 474 NFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQATVS 524
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR + E E +L+N+ K G N L P+RD G + + IG+Q+
Sbjct: 525 RIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 574
>gi|129560442|dbj|BAF48777.1| LOV-domain containing protein [Marchantia polymorpha]
Length = 718
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 75/137 (54%), Gaps = 14/137 (10%)
Query: 33 GGGGDDTELSLKPGLL-----FYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEV 87
G G+ T S+ PG+ + +FVV DA +P++P++Y + F TGY A EV
Sbjct: 261 GSSGESTFSSIIPGVSRNVKEALTSFQLAFVVCDALNPEYPVLYASAGFFSMTGYTAKEV 320
Query: 88 LGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRL 147
+GRNCRFLQ + D + IR L F G+LLN+KKDG P N L +
Sbjct: 321 VGRNCRFLQGQ---------YTDAKDIEMIRDALVNRKSFSGKLLNYKKDGIPFWNLLTI 371
Query: 148 APIRDDDGTVTHIIGIQ 164
+PI+D++G + IG+Q
Sbjct: 372 SPIKDEEGRIIKYIGMQ 388
>gi|448560681|ref|ZP_21634129.1| bacterio-opsin activator [Haloferax prahovense DSM 18310]
gi|445722331|gb|ELZ73994.1| bacterio-opsin activator [Haloferax prahovense DSM 18310]
Length = 658
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P VAD PD P++YVN+ FE TGY AD LGRNCR+LQ P DP
Sbjct: 143 PVGITVADCSLPDRPLVYVNEAFEAMTGYSADAALGRNCRYLQ---------GPNTDPER 193
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+RR +E ELLN++ +G NR+ +AP+ DG VTH +G Q
Sbjct: 194 VAELRRAIEAEESASVELLNYRANGETFWNRVDVAPLSGPDGEVTHYVGFQ 244
>gi|428311102|ref|YP_007122079.1| PAS domain-containing protein [Microcoleus sp. PCC 7113]
gi|428252714|gb|AFZ18673.1| PAS domain S-box [Microcoleus sp. PCC 7113]
Length = 929
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 65/112 (58%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T V++DA D PIIY N F TGY +EV+GRNCRFLQ D DP+
Sbjct: 37 TSCGIVISDARCFDNPIIYCNPAFLKITGYSQEEVIGRNCRFLQGHD---------TDPI 87
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V +IR+ + G E + L N++KDGT N L ++P+RD G VTH IG+Q
Sbjct: 88 AVEQIRQSIRTGQEVRVVLKNYRKDGTLFWNDLTISPVRDSSGKVTHFIGVQ 139
>gi|449440856|ref|XP_004138200.1| PREDICTED: uncharacterized protein LOC101209027 [Cucumis sativus]
Length = 597
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 128/272 (47%), Gaps = 38/272 (13%)
Query: 355 PPGRWGHTLSSL-NGSWLVVFGGCGRQGL-LNDVFVLDLDAKQPTWIE-VSGGAPPLPRS 411
P RWGHT +++ +G +L VFGG G+ N V V D AKQ TW + V G+PP PR
Sbjct: 24 PGKRWGHTCNAIKDGRYLYVFGGYGKDNCQTNQVHVFDT-AKQ-TWSQPVIKGSPPTPRD 81
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDK---PMWREIPTSWSPPSRLGHSL 468
H +C G L V GG TD L D Y+LD + P R P +R GHS
Sbjct: 82 SH-TCTTIGDNLFVFGG-TDGMSPLKDLYILDTSMHTWICPSLR----GNGPEAREGHSA 135
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTID---LGDEEPQWKQLECNAFTGVGSQSAVV 525
++ G+ ++ +FGG KS + E Y D L E WKQ +
Sbjct: 136 TLVGK-RLFIFGGCGKSTS---NNDEVYYNDLYILNTETFVWKQ---------ATTMGTP 182
Query: 526 PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ--PPKFA 583
P PR H S ++I+ GG A + S + +LD + W LN GQ PP+
Sbjct: 183 PSPRDSHTCSSWK-NKVIVIGGEDAHDYYLSDVHILD--TDTLVWTELNTSGQLLPPRA- 238
Query: 584 WGHSTCVVGGTRVLVLGGHTGEEWVLNELHEL 615
GH+T G + + V GG T + + N+LH L
Sbjct: 239 -GHTTIAFGRS-LFVFGGFTDAQNLYNDLHML 268
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 23/208 (11%)
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
W + ++G+ R + + G+ L +FGG M P+ D ++L D + W S+
Sbjct: 66 TWSQPVIKGSPPTPRDSHTCTTIGDNLFVFGGTD-GMSPLKDLYIL--DTSMHTWICPSL 122
Query: 352 KSS-PPGRWGHTLSSLNGSWLVVFGGCGR------QGLLNDVFVLDLDA---KQPTWIEV 401
+ + P R GH+ ++L G L +FGGCG+ + ND+++L+ + KQ T +
Sbjct: 123 RGNGPEAREGHS-ATLVGKRLFIFGGCGKSTSNNDEVYYNDLYILNTETFVWKQATTM-- 179
Query: 402 SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-P 460
G PP PR H +C +K++V GG LSD ++LD TD +W E+ TS
Sbjct: 180 --GTPPSPRDSH-TCSSWKNKVIVIGGEDAHDYYLSDVHILD--TDTLVWTELNTSGQLL 234
Query: 461 PSRLGHSLSVYGRTKVLMFGGLAKSGHL 488
P R GH+ +GR+ + +FGG + +L
Sbjct: 235 PPRAGHTTIAFGRS-LFVFGGFTDAQNL 261
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE---WRR 348
W ++RG +R SA G RL +FGG G + D+ + +L N E W++
Sbjct: 116 TWICPSLRGNGPEAREGHSATLVGKRLFIFGGCGKSTSNNDEVYYNDLYILNTETFVWKQ 175
Query: 349 VSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPP 407
+ +PP R HT SS +V+ G L+DV +LD D T + SG P
Sbjct: 176 ATTMGTPPSPRDSHTCSSWKNKVIVIGGEDAHDYYLSDVHILDTDTLVWTELNTSGQLLP 235
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSR---- 463
PR+ H++ I G L V GG TDA L +D ++LD+ + +W +I T PS
Sbjct: 236 -PRAGHTT-IAFGRSLFVFGGFTDAQNLYNDLHMLDI--ENGVWTKITTMGDGPSARFSV 291
Query: 464 LGHSLSVYGRTKVLMFGGLAK 484
G L Y + + GG K
Sbjct: 292 AGDCLDPYKVGTLALLGGCNK 312
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 122/268 (45%), Gaps = 42/268 (15%)
Query: 307 CNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPG-RWGHTLSS 365
CN A G L +FGG G + + V D A W + +K SPP R HT ++
Sbjct: 32 CN--AIKDGRYLYVFGGYGKDNCQTNQVHVF--DTAKQTWSQPVIKGSPPTPRDSHTCTT 87
Query: 366 LNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLV 424
+ G L VFGG L D+++LD TWI S G P R HS+ ++ G +L
Sbjct: 88 I-GDNLFVFGGTDGMSPLKDLYILDTSMH--TWICPSLRGNGPEAREGHSATLV-GKRLF 143
Query: 425 VSGGC-----TDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVLM 478
+ GGC + V +D Y+L+ T+ +W++ T +PPS R H+ S + + KV++
Sbjct: 144 IFGGCGKSTSNNDEVYYNDLYILN--TETFVWKQATTMGTPPSPRDSHTCSSW-KNKVIV 200
Query: 479 FGGLAKSGHLRLRSGESYTID---LGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAV 535
GG + H + Y D L + W +L S + PPR H +
Sbjct: 201 IGG--EDAH------DYYLSDVHILDTDTLVWTELNT---------SGQLLPPRAGHTTI 243
Query: 536 SMPCGR-IIIFGGSIAGLHSPSQLFLLD 562
+ GR + +FGG + + L +LD
Sbjct: 244 AF--GRSLFVFGGFTDAQNLYNDLHMLD 269
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
E W++ T G R + + + N++++ GGE + + D +L+ D
Sbjct: 169 ETFVWKQATTMGTPPSPRDSHTCSSWKNKVIVIGGEDAHDYYLSDVHILDTDTLVWTELN 228
Query: 349 VSVKSSPPGRWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLDAKQPTWIEVSGGAPP 407
S + PP R GHT + G L VFGG Q L ND+ +LD++ T I G P
Sbjct: 229 TSGQLLPP-RAGHTTIAF-GRSLFVFGGFTDAQNLYNDLHMLDIENGVWTKITTMGDGPS 286
Query: 408 LPRSWHSSCI--IEGSKLVVSGGCTDAGVLLSDTYLL 442
S C+ + L + GGC L D Y L
Sbjct: 287 ARFSVAGDCLDPYKVGTLALLGGCNKGLEALGDMYYL 323
>gi|168044289|ref|XP_001774614.1| PHOTA2 phototropin A2 blue light photoreceptor [Physcomitrella
patens subsp. patens]
gi|50510313|dbj|BAD32623.1| phototropin [Physcomitrella patens]
gi|162674034|gb|EDQ60548.1| PHOTA2 phototropin A2 blue light photoreceptor [Physcomitrella
patens subsp. patens]
Length = 1095
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI+Y + F TGY EV+G NCRFLQ P DP+ V
Sbjct: 285 TFVVSDATKPDYPIMYASAGFFSMTGYSPKEVIGYNCRFLQ---------GPDTDPMEVE 335
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR+ + G F G LLN++KDGT N L + PI+D++ V IG+Q+
Sbjct: 336 KIRQAVRTGKPFCGRLLNYRKDGTQFWNLLTITPIKDENDKVIKFIGMQV 385
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +EVLGRNCRFLQ +D D V
Sbjct: 568 NFVITDPRLPDNPIIFASDEFLELTEYTREEVLGRNCRFLQGQD---------TDQNTVQ 618
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++E + +LLN+ K G P N L +RD G + + IG+Q+
Sbjct: 619 QIRDAIKENRDITVQLLNYTKSGKPFWNLFHLQAMRDQRGELQYFIGVQL 668
>gi|428311734|ref|YP_007122711.1| PAS domain-containing protein [Microcoleus sp. PCC 7113]
gi|428253346|gb|AFZ19305.1| PAS domain S-box [Microcoleus sp. PCC 7113]
Length = 483
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 107/227 (47%), Gaps = 35/227 (15%)
Query: 21 GKRQKCSFEGGGGGGGDDTEL--SLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEI 78
G Q + GG G T L S+K + V+AD P P+IYVN FE
Sbjct: 121 GIAQDVTESNWGGSGAYRTRLQESVKLRDQAIAASRVGIVIADTRLPGMPLIYVNPAFEQ 180
Query: 79 FTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDG 138
TGY A EVLG NCRFLQ ++ V+++R ++ G LLN++KDG
Sbjct: 181 ITGYSAAEVLGYNCRFLQGKE---------TSQPAVAQLRAAIKAGEHCAVTLLNYRKDG 231
Query: 139 TPLVNRLRLAPIRDDDGTVTHIIGIQ------IFSEA----------KIDLNHVSYPV-- 180
TP N L ++PI D+D +TH +GIQ I +E ++ LN + P+
Sbjct: 232 TPFWNELTISPIYDEDKKLTHFVGIQSDISDRIKAEQALRLEQQKSERLLLNILPKPIAD 291
Query: 181 ----FKENCNQQYDQSAQYFSG--GHSPLSQHQDICGILQLSDEVLA 221
F+ + QQ+ ++ F+ G +PL+ +L L +++ +
Sbjct: 292 QLKQFEGSLAQQFTEATILFADIVGFTPLAAQMSPLELLNLLNQIFS 338
>gi|428318054|ref|YP_007115936.1| PAS/PAC sensor signal transduction histidine kinase [Oscillatoria
nigro-viridis PCC 7112]
gi|428241734|gb|AFZ07520.1| PAS/PAC sensor signal transduction histidine kinase [Oscillatoria
nigro-viridis PCC 7112]
Length = 1113
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T +ADA PD PI+Y N FE TGY E++G+NCRFLQ P D
Sbjct: 38 TSNGIAIADATRPDKPIVYCNGAFERITGYDRSEIIGKNCRFLQ---------GPDTDGA 88
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ------IF 166
V IR L+E + + L N++KDGT N L ++P+RD G VTH IG+Q
Sbjct: 89 AVDRIRAALKEQHDCKVVLKNYRKDGTAFWNELTISPVRDSSGIVTHFIGVQSDITDRFQ 148
Query: 167 SEAKIDLNHVSYPVFKENCNQQYDQSA---QYFSGGHS 201
+E + Y EN + Q+A +Y S +
Sbjct: 149 AEEALKQAEAKYRSIFENATEGIFQTAPDGRYLSANQA 186
>gi|424875649|ref|ZP_18299311.1| PAS domain S-box [Rhizobium leguminosarum bv. viciae WSM1455]
gi|393171350|gb|EJC71397.1| PAS domain S-box [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 345
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Query: 48 LFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP 107
+ + T VV D PD PI+ NK F TGY A EVLGRNCRFLQ P
Sbjct: 31 IAFERTRMPMVVTDGRKPDLPIVLANKAFLELTGYAAQEVLGRNCRFLQ---------GP 81
Query: 108 LVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
P+ V+EIR + E E+LN+KK G NRL L+P+ DDG + + G QI
Sbjct: 82 ATSPIAVAEIRAAIAGEREVSVEILNYKKSGEQFWNRLHLSPVHGDDGKILYFFGSQI 139
>gi|412985223|emb|CCO20248.1| phototropin [Bathycoccus prasinos]
Length = 888
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 14 EGVIQGSGKRQKCSFEGGGGGGGDDTELSLKPGLLFYPT---TPTSFVVADAFDPDFPII 70
E V+ +G + SF+ D L+ + G+ T SFV+ D PD PI+
Sbjct: 222 EAVLSATGLKSSKSFDD------DQQALTSRSGMDMASTLERIQESFVITDPSLPDHPIV 275
Query: 71 YVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGE 130
+ + F FTGY +E+LGRNCRFLQ +D D V IR ++ G E
Sbjct: 276 FASDGFLSFTGYTREEILGRNCRFLQGKD---------TDQNSVKAIRDAIDAGSEVTVR 326
Query: 131 LLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
LLN+ K+G P N LAP+RDD+G V G+Q+
Sbjct: 327 LLNYTKNGRPFWNMFTLAPVRDDEGKVRFFAGVQV 361
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+F V DA PD PI+Y + F TGY ++E++ NCRFLQ +D DP V
Sbjct: 78 TFTVCDATAPDCPIVYASDSFLQMTGYPSEEIIHHNCRFLQGKD---------TDPESVK 128
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNH 175
++R ++ G LLN++KDGTP N L +AP++ DGTV IG+Q+ K + N
Sbjct: 129 KLRDAVKAGERVSVRLLNYRKDGTPFWNYLTIAPVKLADGTVVKYIGVQVDVTDKTEGN- 187
Query: 176 VSYPVFKEN 184
V+ V K+N
Sbjct: 188 VAPSVLKDN 196
>gi|194709095|pdb|2Z6C|A Chain A, Crystal Structure Of Lov1 Domain Of Phototropin1 From
Arabidopsis Thaliana
gi|194709096|pdb|2Z6C|B Chain B, Crystal Structure Of Lov1 Domain Of Phototropin1 From
Arabidopsis Thaliana
Length = 129
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +FVV+DA PD+PI+Y + F TGY + EV+GRNCRFLQ A
Sbjct: 15 TFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSGTDADE------- 67
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+++IR L G + G +LN+KKDGT N L +API+D+ G V IG+Q+
Sbjct: 68 --LAKIRETLAAGNNYCGRILNYKKDGTSFWNLLTIAPIKDESGKVLKFIGMQV 119
>gi|197311343|gb|ACH61904.1| putative blue light receptor protein [bacterium enrichment culture
clone pWThLOV]
Length = 1204
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V D PD P++YVN FE TGY DEVLGRNCRFLQ P D + +
Sbjct: 444 ITVVDVLAPDHPVVYVNPAFERLTGYGRDEVLGRNCRFLQ---------GPETDQPALGQ 494
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R L G L N++KDG+ +N L +AP+ D G VTH IG+Q
Sbjct: 495 VREALRHGRSTTVVLHNYRKDGSRFINELHIAPVHDSHGRVTHFIGVQ 542
>gi|66827335|ref|XP_647022.1| RING zinc finger-containing protein [Dictyostelium discoideum AX4]
gi|161789048|sp|Q7M3S9.2|RNGB_DICDI RecName: Full=RING finger protein B; Short=Protein rngB
gi|60475083|gb|EAL73019.1| RING zinc finger-containing protein [Dictyostelium discoideum AX4]
Length = 943
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 347 RRVSVKSSPPGRWGHTLSSL-NGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGA 405
+RVS+ SP RWGHT ++L NGS +VFGG + ND+ ++ + IE G A
Sbjct: 6 KRVSLIGSPEPRWGHTGTTLPNGSGFIVFGGNSNRAF-NDIQYYNIFNNSWSKIEAVGNA 64
Query: 406 PPLPRSWHSSCIIEG-------SKLVVSGGCTDAGVLLSDTYLLDLTTDKP-MWREIPTS 457
P R HS+ + + S ++ G SD +L + +++ +W+++ T
Sbjct: 65 PS-ERYGHSAVLYQSQSRPYSDSYQIIFFGGRATSKPFSDINILYVNSNRSFIWKQVTTK 123
Query: 458 WSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD-EEPQWKQLECNAFT 516
S R GH+ VY R +++FGG H +S ++ L E +W+Q C
Sbjct: 124 -SIEGRAGHTAVVY-RQNLVVFGG-----HNNHKSKYYNSVLLFSLESNEWRQQVC---- 172
Query: 517 GVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVP 576
V+P R H + ++ IFGG G + ++ LD E W+ +
Sbjct: 173 -----GGVIPSARATHSTFQVNNNKMFIFGG-YDGKKYYNDIYYLDL--ETWIWKKVEAK 224
Query: 577 GQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHEL 615
G PPK GHS ++ ++++ GG + LN++H L
Sbjct: 225 GTPPKPRSGHSATMIQNNKLMIFGGCGSDSNFLNDIHIL 263
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 19/221 (8%)
Query: 290 AVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR- 348
+ W++ T + ++E R +A LV+FGG + ++ +L + EWR+
Sbjct: 114 SFIWKQVTTK-SIE-GRAGHTAVVYRQNLVVFGGHNNHKSKYYNSVLL-FSLESNEWRQQ 170
Query: 349 VSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWI---EVSGGA 405
V P R H+ +N + + +FGG + ND++ LDL+ TWI + G
Sbjct: 171 VCGGVIPSARATHSTFQVNNNKMFIFGGYDGKKYYNDIYYLDLE----TWIWKKVEAKGT 226
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS---PPS 462
PP PRS HS+ +I+ +KL++ GGC L+D ++L + E P+ P +
Sbjct: 227 PPKPRSGHSATMIQNNKLMIFGGCGSDSNFLNDIHILHIEGANEYRWEQPSYLGLEIPQA 286
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
R H+ + G +V ++ G SG+L G+ +T++ D+
Sbjct: 287 RFRHTTNFIG-GRVYIYAGTG-SGNLM---GDLHTLEFLDD 322
>gi|168021149|ref|XP_001763104.1| PHOTA4 phototropin blue light photoreceptor [Physcomitrella patens
subsp. patens]
gi|162685587|gb|EDQ71981.1| PHOTA4 phototropin blue light photoreceptor [Physcomitrella patens
subsp. patens]
Length = 868
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV DA PDFPI+Y + F TGY E++GR+CRFLQ P D ++
Sbjct: 41 TFVVCDAVQPDFPILYASAGFFTMTGYTPKEIIGRSCRFLQ---------GPETDKADIA 91
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR L++G F G LLN+KKD + N L + PI+DD G V IG+Q+
Sbjct: 92 SIREALQQGKNFCGRLLNYKKDRSAFWNLLTMTPIKDDAGKVLKYIGMQV 141
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P +FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 331 PKNFVITDPRLPDNPIIFASDEFLELTEYSREEILGRNCRFLQ---------GPDTDRAV 381
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +IR + + +LLN+ K G P N L +RD +G + + IG+Q+
Sbjct: 382 VDQIRDAIAARRDITVQLLNYTKSGKPFWNLFHLQSMRDHNGELQYFIGVQL 433
>gi|119488887|ref|ZP_01621849.1| hybrid sensory kinase [Lyngbya sp. PCC 8106]
gi|119455048|gb|EAW36190.1| hybrid sensory kinase [Lyngbya sp. PCC 8106]
Length = 1261
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 15/119 (12%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ADA D P+ YVN FE TGY ADEV+G NCRFLQ D +D + E
Sbjct: 352 IVIADAQLTDKPLTYVNSGFERTTGYSADEVIGENCRFLQGED---------IDQPNLIE 402
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ------IFSEA 169
+R + EG E + + N++KDGTP N+L ++P+ D++G +TH IGIQ IF+E
Sbjct: 403 MRNSIAEGRETKIIVRNYRKDGTPFWNKLSISPVHDEEGNLTHFIGIQEDISDRIFAEV 461
>gi|433774135|ref|YP_007304602.1| PAS domain S-box [Mesorhizobium australicum WSM2073]
gi|433666150|gb|AGB45226.1| PAS domain S-box [Mesorhizobium australicum WSM2073]
Length = 367
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 9/116 (7%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ T V+ DA D PI+ N+ F TG+ +DEVLGRNCRFLQ
Sbjct: 50 FERTRMPIVITDARQADNPIVLANRAFLDLTGFTSDEVLGRNCRFLQGEG---------T 100
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
P V+EIR +E E E+LNF+KDG+P N+L L+PI+DD+G + + QI
Sbjct: 101 SPTAVAEIRAAIERQREANVEILNFRKDGSPFWNQLHLSPIKDDEGGLLYYFASQI 156
>gi|209963693|ref|YP_002296608.1| multi-sensor hybrid histidine kinase [Rhodospirillum centenum SW]
gi|209957159|gb|ACI97795.1| multi-sensor hybrid histidine kinase, putative [Rhodospirillum
centenum SW]
Length = 368
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P S VADA PD P+IYVN++F+ TGY EV+GRNCRFL P D
Sbjct: 15 PISIAVADARRPDTPLIYVNRIFQTLTGYDRAEVMGRNCRFLH---------GPGTDDAA 65
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V + + G LLN++KDG+ +N L LAPI D+ GT++ IG+Q
Sbjct: 66 VGVLHEAIRTGSRADVRLLNYRKDGSTFLNHLVLAPIHDETGTLSAYIGLQ 116
>gi|255088732|ref|XP_002506288.1| blue light receptor [Micromonas sp. RCC299]
gi|226521560|gb|ACO67546.1| blue light receptor [Micromonas sp. RCC299]
Length = 870
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+AD PD PI++ + F FTGY +E+LGRNCRFLQ P D V+
Sbjct: 241 SFVIADPSLPDCPIVFASDGFLDFTGYTREEILGRNCRFLQ---------GPRTDRSAVA 291
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
EIR+ ++EG E LLN+ K G P N +AP+RD+ G V G+Q+
Sbjct: 292 EIRKAIDEGSECTVRLLNYTKQGKPFWNMFTMAPVRDEQGNVRFFAGVQV 341
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+F V D PD PI+Y + F TGY A+EVL RNCRFLQ + V
Sbjct: 62 TFTVCDPTLPDCPIVYASDGFLKMTGYPAEEVLNRNCRFLQGEETNMDD---------VR 112
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+I +++G LLN++KDG N L +AP++ DGTV IG+Q+
Sbjct: 113 KISEAVKKGERITVRLLNYRKDGQKFWNLLTVAPVKLPDGTVAKFIGVQV 162
>gi|116255520|ref|YP_771353.1| hypothetical protein pRL110320 [Rhizobium leguminosarum bv. viciae
3841]
gi|115260168|emb|CAK03271.1| putative regulator [Rhizobium leguminosarum bv. viciae 3841]
Length = 345
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Query: 48 LFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP 107
+ + T VV D PD PI+ NK F TGY A EVLGRNCRFLQ P
Sbjct: 31 IAFERTRMPMVVTDGRKPDLPIVLANKAFLELTGYPAQEVLGRNCRFLQ---------GP 81
Query: 108 LVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
P+ V+EIR + E E+LN+KK G NRL L+P+ DDG + + G QI
Sbjct: 82 ATSPIAVAEIRAAIAGEREVSVEILNYKKSGEQFWNRLHLSPVHGDDGKILYFFGSQI 139
>gi|452206149|ref|YP_007486271.1| receiver/sensor/bat box HTH-10 family transcription regulator Bat
(homolog to bacterioopsin activator) [Natronomonas
moolapensis 8.8.11]
gi|452082249|emb|CCQ35503.1| receiver/sensor/bat box HTH-10 family transcription regulator Bat
(homolog to bacterioopsin activator) [Natronomonas
moolapensis 8.8.11]
Length = 673
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 70/128 (54%), Gaps = 10/128 (7%)
Query: 37 DDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ 96
D T +LK L P +AD +PD P+IYVN+ FE TGY ++LGRNCRFLQ
Sbjct: 133 DPTAANLKLAELAMDEAPVGITIADPHEPDEPLIYVNEAFERLTGYDTYDILGRNCRFLQ 192
Query: 97 YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGT 156
DP V +R+ ++ E+LN++K+G P N+L +AP+ DDG
Sbjct: 193 GEG---------TDPETVDRLRQAVDNERSISVEILNYRKNGEPFWNQLSVAPVH-DDGE 242
Query: 157 VTHIIGIQ 164
+TH +G Q
Sbjct: 243 LTHYLGFQ 250
>gi|2754825|gb|AAC05084.1| NPH1-2 [Avena sativa]
Length = 927
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA P PI+Y + F TGY + EV+GRNCRFLQ DP ++
Sbjct: 140 TFVVSDASRPGHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPAEIA 190
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR+ L +G + G +LN+KKDGT N L +API+D++G V IG+Q+
Sbjct: 191 KIRQALADGSNYCGRVLNYKKDGTAFWNLLTIAPIKDEEGRVLKFIGMQV 240
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 417 NFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQ---------GPETDRATVR 467
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 468 KIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 517
>gi|66813414|ref|XP_640886.1| hypothetical protein DDB_G0281209 [Dictyostelium discoideum AX4]
gi|60468901|gb|EAL66901.1| hypothetical protein DDB_G0281209 [Dictyostelium discoideum AX4]
Length = 496
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 160/369 (43%), Gaps = 67/369 (18%)
Query: 281 LARELTTLEAVCWRKF---TVRGAVEPSRCNF--SACAAGNRLVLFGGEGVNMQPMDDTF 335
+ ++ + WR+ ++G +P C + + A G + +FGG N ++D
Sbjct: 158 ILKDSSNYSFYNWRQIGEDDLQGDGKPPSCRYAHTMTAIGTNIYIFGG--YNGIYLND-- 213
Query: 336 VLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQ 395
V D N +W + P + S + G L ++ G + +LND++ LD+D+ +
Sbjct: 214 VHCFDTINKKWNLIQTTGPTPIKRAFHSSWVYGKKLYIYAGFNGKLILNDLYSLDIDSME 273
Query: 396 PTW-IEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI 454
W +EV+GG P PR H++ +I G+ + + GG D+ LSD ++L+L + WR I
Sbjct: 274 --WKLEVTGGVQPKPRFEHTTSLI-GNSIYLFGGANDSN-WLSDIHILNL--EDKQWRSI 327
Query: 455 PTSWS--------------------------PPSRLGHSLSVYGRTKVLMFGGLAKSGHL 488
T PP R HS S G + +FGG G L
Sbjct: 328 ATPIININENSNNNSNNNSNNNNNNNNSLSPPPKRCAHS-SCVGGNSIFIFGGY--DGGL 384
Query: 489 RLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGS 548
RL S + + +W L + +G R H + SM G +I FGG
Sbjct: 385 RLNS----IYEFDTIKKRWYNLHNHNSKKMG---------RAAH-SCSMINGSMISFGG- 429
Query: 549 IAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWV 608
G + L L + +K WR V GQPP HS+CV+ ++ + GG GE
Sbjct: 430 FEGTKRLNDLSLFN--TQKKEWRPTVVFGQPPSIRSYHSSCVI-DNKMYIFGGF-GE--- 482
Query: 609 LNELHELCL 617
LN L++L +
Sbjct: 483 LNRLNDLFI 491
>gi|170077969|ref|YP_001734607.1| sensory box/GGDEF family protein [Synechococcus sp. PCC 7002]
gi|169885638|gb|ACA99351.1| sensory box/GGDEF family protein [Synechococcus sp. PCC 7002]
Length = 780
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
V+ DA + + PIIYVN+ FE TGY ADE+LGRNC FLQ RD RR P ++E+
Sbjct: 374 VITDAREENNPIIYVNQGFEKITGYTADEILGRNCNFLQGRD----RRQP-----PLTEL 424
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R + +G E L N++K+G P N L + P+RD G +TH IGIQ
Sbjct: 425 RAAILKGQECNVTLRNYRKNGEPFWNALHIFPVRDPAGYLTHFIGIQ 471
>gi|226498304|ref|NP_001147852.1| kelch motif family protein [Zea mays]
gi|195614132|gb|ACG28896.1| kelch motif family protein [Zea mays]
Length = 620
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 147/332 (44%), Gaps = 29/332 (8%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W V G P R SAC + +FGG + D VL L+ W V+
Sbjct: 9 WLYPKVVGFNPPERWGHSACFFEGFVYVFGGCCGGLHFGD---VLKLNVETMAWSLVATT 65
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSW 412
PG ++L G ++VFGG +ND+ VLDL + T + G PP PR
Sbjct: 66 GQCPGTRDSHGAALVGHRMLVFGGTNGGRKVNDLHVLDLRTGEWTRPQCKGAPPPSPRES 125
Query: 413 HSSCIIEGSKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
H+ ++ G +LVV GG + G L D ++LD+ T E+ +P R HS
Sbjct: 126 HTVTVVGGDRLVVFGGSGEGEGNYLCDVHVLDVPTMTWSSPEVRGGHAPAPRDSHSAVAV 185
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESY--TIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPR 529
GR ++ +FGG G+ Y +D+ D + + + F G+ V R
Sbjct: 186 GR-RLFVFGG---------DCGDRYHGDVDVLDVD----TMAWSMFPVKGASPGV----R 227
Query: 530 LDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTC 589
H A+S+ ++ I GG + H S +++LD + SW L V GQ P+ + H T
Sbjct: 228 AGHAAMSV-GSKVYIIGG-VGDKHYYSDVWVLDVTNR--SWSQLEVCGQRPQGRFSH-TA 282
Query: 590 VVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
V T + + GG +E LNEL L L S+
Sbjct: 283 VAMNTDIAIYGGCGEDERPLNELLILQLGSEH 314
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 124/290 (42%), Gaps = 29/290 (10%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
+E + W G +R + A G+R+++FGG + ++D VL+L EW
Sbjct: 53 NVETMAWSLVATTGQCPGTRDSHGAALVGHRMLVFGGTNGGRK-VNDLHVLDLRTG--EW 109
Query: 347 RRVSVKSSPP--GRWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQPTWIEVS 402
R K +PP R HT++ + G LVVFGG G L DV VLD+ + EV
Sbjct: 110 TRPQCKGAPPPSPRESHTVTVVGGDRLVVFGGSGEGEGNYLCDVHVLDVPTMTWSSPEVR 169
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS-WSPP 461
GG P PR HS+ + V G C D D +LD+ D W P SP
Sbjct: 170 GGHAPAPRDSHSAVAVGRRLFVFGGDCGDR--YHGDVDVLDV--DTMAWSMFPVKGASPG 225
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
R GH+ G +KV + GG+ + + + +D+ + W QLE
Sbjct: 226 VRAGHAAMSVG-SKVYIIGGVGDKHYY----SDVWVLDVTNRS--WSQLEV--------- 269
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
P R H AV+M I I+GG ++L +L E P+ R
Sbjct: 270 CGQRPQGRFSHTAVAMNT-DIAIYGGCGEDERPLNELLILQLGSEHPNGR 318
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++ + W F V+GA R +A + G+++ + GG G + D +V LD N
Sbjct: 205 DVLDVDTMAWSMFPVKGASPGVRAGHAAMSVGSKVYIIGGVG-DKHYYSDVWV--LDVTN 261
Query: 344 PEWRRVSV-KSSPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ V P GR+ HT ++N + + ++GGCG + LN++ +L L ++ P
Sbjct: 262 RSWSQLEVCGQRPQGRFSHTAVAMN-TDIAIYGGCGEDERPLNELLILQLGSEHPN 316
>gi|223948795|gb|ACN28481.1| unknown [Zea mays]
gi|414877199|tpg|DAA54330.1| TPA: kelch motif family protein [Zea mays]
Length = 620
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 147/332 (44%), Gaps = 29/332 (8%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W V G P R SAC + +FGG + D VL L+ W V+
Sbjct: 9 WLYPKVVGFNPPERWGHSACFFEGFVYVFGGCCGGLHFGD---VLKLNVETMAWSLVATT 65
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSW 412
PG ++L G ++VFGG +ND+ VLDL + T + G PP PR
Sbjct: 66 GQCPGTRDSHGAALVGHRMLVFGGTNGGRKVNDLHVLDLRTGEWTRPQCKGAPPPSPRES 125
Query: 413 HSSCIIEGSKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
H+ ++ G +LVV GG + G L D ++LD+ T E+ +P R HS
Sbjct: 126 HTVTVVGGDRLVVFGGSGEGEGNYLCDVHVLDVPTMTWSSPEVRGGHAPAPRDSHSAVAV 185
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESY--TIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPR 529
GR ++ +FGG G+ Y +D+ D + + + F G+ V R
Sbjct: 186 GR-RLFVFGG---------DCGDRYHGDVDVLDVD----TMAWSMFPVKGASPGV----R 227
Query: 530 LDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTC 589
H A+S+ ++ I GG + H S +++LD + SW L V GQ P+ + H T
Sbjct: 228 AGHAAMSV-GSKVYIIGG-VGDKHYYSDVWVLDVTNR--SWSQLEVCGQRPQGRFSH-TA 282
Query: 590 VVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
V T + + GG +E LNEL L L S+
Sbjct: 283 VAMNTDIAIYGGCGEDERPLNELLILQLGSEH 314
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 124/290 (42%), Gaps = 29/290 (10%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
+E + W G +R + A G+R+++FGG + ++D VL+L EW
Sbjct: 53 NVETMAWSLVATTGQCPGTRDSHGAALVGHRMLVFGGTNGGRK-VNDLHVLDLRTG--EW 109
Query: 347 RRVSVKSSPP--GRWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQPTWIEVS 402
R K +PP R HT++ + G LVVFGG G L DV VLD+ + EV
Sbjct: 110 TRPQCKGAPPPSPRESHTVTVVGGDRLVVFGGSGEGEGNYLCDVHVLDVPTMTWSSPEVR 169
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS-WSPP 461
GG P PR HS+ + V G C D D +LD+ D W P SP
Sbjct: 170 GGHAPAPRDSHSAVAVGRRLFVFGGDCGDR--YHGDVDVLDV--DTMAWSMFPVKGASPG 225
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
R GH+ G +KV + GG+ + + + +D+ + W QLE
Sbjct: 226 VRAGHAAMSVG-SKVYIIGGVGDKHYY----SDVWVLDVTNRS--WSQLEV--------- 269
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
P R H AV+M I I+GG ++L +L E P+ R
Sbjct: 270 CGQRPQGRFSHTAVAMNT-DIAIYGGCGEDERPLNELLILQLGSEHPNGR 318
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++ + W F V+GA R +A + G+++ + GG G + D +V LD N
Sbjct: 205 DVLDVDTMAWSMFPVKGASPGVRAGHAAMSVGSKVYIIGGVG-DKHYYSDVWV--LDVTN 261
Query: 344 PEWRRVSV-KSSPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ V P GR+ HT ++N + + ++GGCG + LN++ +L L ++ P
Sbjct: 262 RSWSQLEVCGQRPQGRFSHTAVAMN-TDIAIYGGCGEDERPLNELLILQLGSEHPN 316
>gi|168043568|ref|XP_001774256.1| PHOTA1 phototropin A1 blue light photoreceptor [Physcomitrella
patens subsp. patens]
gi|50510311|dbj|BAD32622.1| phototropin [Physcomitrella patens]
gi|162674383|gb|EDQ60892.1| PHOTA1 phototropin A1 blue light photoreceptor [Physcomitrella
patens subsp. patens]
Length = 1070
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD PI+Y + F +GY A E++G NCRFLQ P DP V
Sbjct: 251 TFVVSDATKPDCPIVYASAGFFTMSGYSAKEIIGHNCRFLQ---------GPDTDPADVE 301
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ G F G LLN++KDG+ N L + PI+D++ V IG+Q+
Sbjct: 302 KIRHAVKNGKNFCGRLLNYRKDGSTFWNLLTITPIKDENDKVVKFIGMQV 351
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 531 NFVITDPRLPDNPIIFASDEFLELTEYTREEILGRNCRFLQ---------GPDTDQNTVQ 581
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++E + +LLN+ K G P N L +RD G + + IG+Q+
Sbjct: 582 KIRDAIKENRDITVQLLNYTKSGKPFWNLFHLQAMRDHKGELQYFIGVQM 631
>gi|300869179|ref|ZP_07113775.1| Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(S) [Oscillatoria sp. PCC 6506]
gi|300332828|emb|CBN58973.1| Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(S) [Oscillatoria sp. PCC 6506]
Length = 1041
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 15/142 (10%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
++ ++ DA D P IYVN FE TGY+ DE+LG+NCR LQ RA R P
Sbjct: 49 SSSNGIIITDATQSDNPTIYVNPSFERMTGYQRDEILGKNCRILQ----RADRNQP---- 100
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI------ 165
+ E+R L EG E Q L N++KDGTP N L ++P+ + +TH +GIQ
Sbjct: 101 -ALKEVRTALNEGKECQVVLKNYRKDGTPFWNELSISPVYNTRRHLTHFVGIQTDITDRK 159
Query: 166 FSEAKIDLNHVSYPVFKENCNQ 187
SE ++ L + F N Q
Sbjct: 160 RSEEELFLKSQTLATFSANLKQ 181
>gi|242052729|ref|XP_002455510.1| hypothetical protein SORBIDRAFT_03g012440 [Sorghum bicolor]
gi|241927485|gb|EES00630.1| hypothetical protein SORBIDRAFT_03g012440 [Sorghum bicolor]
Length = 613
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 149/331 (45%), Gaps = 30/331 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W V G P R SAC + +FGG + D VL L+ W ++
Sbjct: 9 WLYPKVVGFNPPERWGHSACFFEGVVYVFGGCCGGLHFSD---VLTLNVETMAWSSLATT 65
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSW 412
PG ++L G ++VFGG +ND+ VLDL ++ T + G APP PR
Sbjct: 66 GQRPGTRDSHGAALVGHRMLVFGGTNGGKKVNDLHVLDLRTREWTRPQCKG-APPSPRES 124
Query: 413 HSSCIIEGSKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSLSV 470
H+ ++ G +LVV GG + G LSD ++LD+ T M P +PP+ R HS
Sbjct: 125 HTVTVVGGDRLVVFGGSGEGEGNYLSDVHVLDVPT---MTWSTPEVKAPPAPRDSHSAVA 181
Query: 471 YGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRL 530
G +++ +FGG + GE +D+ + W + + P R
Sbjct: 182 VG-SRLFVFGGDCGDRY----HGEVDVLDV--DTMTWSRFPVKGAS---------PGVRA 225
Query: 531 DHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCV 590
H A+S+ ++ I GG + S +++LD + SW L V GQ P+ + H T V
Sbjct: 226 GHAAMSV-GSKVYIIGG-VGDKQYYSDVWVLDVTNR--SWSQLEVCGQQPQGRFSH-TAV 280
Query: 591 VGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
V T + V GG +E LNEL L L S+
Sbjct: 281 VMNTDIAVYGGCGEDERPLNELLILQLGSEH 311
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 130/290 (44%), Gaps = 32/290 (11%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
+E + W G +R + A G+R+++FGG + ++D VL+L EW
Sbjct: 53 NVETMAWSSLATTGQRPGTRDSHGAALVGHRMLVFGGTNGGKK-VNDLHVLDLRTR--EW 109
Query: 347 RRVSVKSSPPG-RWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQPTWIEVSG 403
R K +PP R HT++ + G LVVFGG G L+DV VLD+ TW
Sbjct: 110 TRPQCKGAPPSPRESHTVTVVGGDRLVVFGGSGEGEGNYLSDVHVLDVPTM--TWSTPEV 167
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGG-CTDAGVLLSDTYLLDLTTDKPMWREIPTS-WSPP 461
APP PR HS+ + GS+L V GG C D + +LD+ D W P SP
Sbjct: 168 KAPPAPRDSHSAVAV-GSRLFVFGGDCGDR--YHGEVDVLDV--DTMTWSRFPVKGASPG 222
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
R GH+ G +KV + GG+ + + + +D+ + W QLE G Q
Sbjct: 223 VRAGHAAMSVG-SKVYIIGGVGDKQYY----SDVWVLDVTNRS--WSQLEV-----CGQQ 270
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
P R H AV M I ++GG ++L +L E P+ R
Sbjct: 271 ----PQGRFSHTAVVMNTD-IAVYGGCGEDERPLNELLILQLGSEHPNGR 315
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++ + W +F V+GA R +A + G+++ + GG G + Q D +V LD N
Sbjct: 202 DVLDVDTMTWSRFPVKGASPGVRAGHAAMSVGSKVYIIGGVG-DKQYYSDVWV--LDVTN 258
Query: 344 PEWRRVSV-KSSPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ V P GR+ HT +N + + V+GGCG + LN++ +L L ++ P
Sbjct: 259 RSWSQLEVCGQQPQGRFSHTAVVMN-TDIAVYGGCGEDERPLNELLILQLGSEHPN 313
>gi|374852440|dbj|BAL55373.1| signal transduction protein [uncultured gamma proteobacterium]
Length = 747
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ ++ DA PD PIIY N F TGY +E+LG+N RFLQ P D
Sbjct: 386 ASSVGILITDALKPDNPIIYANPAFLRITGYSLEELLGKNPRFLQ---------GPETDS 436
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++EIR L+EG + L N++KDGTP N L ++P+RD++G +TH +G+Q
Sbjct: 437 EAIAEIRAALKEGRDCHLTLKNYRKDGTPFWNELLISPVRDENGKLTHFVGVQ 489
>gi|428319417|ref|YP_007117299.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Oscillatoria nigro-viridis PCC 7112]
gi|428243097|gb|AFZ08883.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Oscillatoria nigro-viridis PCC 7112]
Length = 1344
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 75/146 (51%), Gaps = 15/146 (10%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+ DA D PIIYVN FE TGYR DE++G+NCRFLQ D D +
Sbjct: 356 IAITDATVADNPIIYVNPSFERITGYRRDELMGKNCRFLQDTD---------TDSPAAKQ 406
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI------FSEAK 170
+R +EEG E Q L NF+KDGTP + L +AP+ + +TH IG+Q SE +
Sbjct: 407 LRIAIEEGRESQVILRNFRKDGTPFWHELSIAPVYNSRRHLTHFIGVQTDITDRQRSEEE 466
Query: 171 IDLNHVSYPVFKENCNQQYDQSAQYF 196
+ LN + F N + + ++
Sbjct: 467 LFLNSQALAAFSANLKHLHRITTYHY 492
>gi|218186238|gb|EEC68665.1| hypothetical protein OsI_37115 [Oryza sativa Indica Group]
Length = 458
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA P+ PI+Y + F TGY + EV+GRNCRFLQ DP +
Sbjct: 137 TFVVSDATRPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPHEID 187
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
+IR+ L G + G +LN+KKDGTP N L +API+D+DG + IG
Sbjct: 188 KIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGF 235
>gi|303279629|ref|XP_003059107.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458943|gb|EEH56239.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 122
Score = 94.4 bits (233), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 9/115 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+ V D + D PI+Y N F TGY EV+GRNCRFLQ A+ V
Sbjct: 2 ALCVCDMKEADAPIVYANDNFFTQTGYGPAEVIGRNCRFLQGDGTSAE---------TVR 52
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAK 170
E+R+ L G EF G +LN+ K+GT LVN L ++P+RD G VTH IGIQ + A+
Sbjct: 53 EMRKKLASGEEFVGMVLNYHKNGTTLVNSLVMSPLRDAKGVVTHYIGIQRLAAAE 107
>gi|62320280|dbj|BAD94575.1| nonphototropic hypocotyl 1 [Arabidopsis thaliana]
Length = 731
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 12/135 (8%)
Query: 31 GGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGR 90
GG G LK L + T FVV+DA PD+PI+Y + F TGY + EV+GR
Sbjct: 176 GGRSGIPRVSEDLKDALSTFQQT---FVVSDATKPDYPIMYASAGFFNMTGYTSKEVVGR 232
Query: 91 NCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPI 150
NCRFLQ D +++IR L G + G +LN+KKDGT N L +API
Sbjct: 233 NCRFLQGSG---------TDADELAKIRETLAAGNNYCGRILNYKKDGTSFWNLLTIAPI 283
Query: 151 RDDDGTVTHIIGIQI 165
+D+ G V IG+Q+
Sbjct: 284 KDESGKVLKFIGMQV 298
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 476 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDLTTVK 526
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 527 KIRNAIDNQTEVTVQLINYTKSGKKFWNIFHLQPMRDQKGEVQYFIGVQL 576
>gi|380484857|emb|CCF39732.1| vivid PAS protein VVD [Colletotrichum higginsianum]
Length = 196
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 70/118 (59%), Gaps = 6/118 (5%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR----DPRAQRRHPLVD 110
+ ++ D PD PI+Y ++ F I TGY E+LG+NCRFLQ ++ R+H VD
Sbjct: 80 VALLLCDLEQPDTPIVYASEHFSILTGYSNKEILGKNCRFLQAPGGKVSQKSARKH--VD 137
Query: 111 PVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
VV ++R+ +E E Q E+LNFKKDGTP VN L + P+R + + +G Q+ E
Sbjct: 138 KNVVKDMRKAVEANDEVQLEVLNFKKDGTPFVNLLTMIPVRWESQHFRYSVGFQVERE 195
>gi|302817778|ref|XP_002990564.1| hypothetical protein SELMODRAFT_131904 [Selaginella moellendorffii]
gi|300141732|gb|EFJ08441.1| hypothetical protein SELMODRAFT_131904 [Selaginella moellendorffii]
Length = 455
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 347 RRVS--VKSSPPG-RWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPTWIE-V 401
RR S ++ PPG +WGHT +++ + + +FGG GR + NDV V D+ + TW + V
Sbjct: 6 RRSSDQLQQQPPGCKWGHTCNAVR-NLIYIFGGYGRDECQTNDVHVFDIGIRTYTWSKPV 64
Query: 402 SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD---KP-MWREIPTS 457
GA P PR HSS + GSKL V GG TD L D ++LD T+ KP ++ ++P
Sbjct: 65 MKGAHPSPRDSHSSTAV-GSKLYVFGG-TDGTSPLDDLFVLDTATNTWGKPDVFGDVPAP 122
Query: 458 WSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFT- 516
R GHS S+ G + +FGG KS S E Y DL L N F
Sbjct: 123 -----REGHSASLIG-DNLFVFGGCGKSSD---PSEEEYYNDL-------HVLNTNTFVW 166
Query: 517 GVGSQSAVVPPPRLDHVAVSMP-CGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNV 575
S + V P PR H S C ++ GG G + + +LD E +WR +
Sbjct: 167 KKMSTTGVSPIPRDSHTCSSYKNC--FVVMGGEDGGNAYLNDVHILD--TETMAWREVKT 222
Query: 576 PGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
G GH+T + G ++V GG + + + N++H L L +
Sbjct: 223 TGAELMPRAGHTT-ISHGKYLVVFGGFSDDRKLFNDVHTLDLTT 265
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 145/341 (42%), Gaps = 54/341 (15%)
Query: 261 WGREVTGALELMTKKLGWGRLARELTT-------LEAVCWRKFTVRGAVEPSRCNFSACA 313
WG L+ G+GR + + W K ++GA R + S+ A
Sbjct: 21 WGHTCNAVRNLIYIFGGYGRDECQTNDVHVFDIGIRTYTWSKPVMKGAHPSPRDSHSSTA 80
Query: 314 AGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPG-RWGHTLSSLNGSWLV 372
G++L +FGG P+DD FV LD A W + V P R GH+ +SL G L
Sbjct: 81 VGSKLYVFGGTD-GTSPLDDLFV--LDTATNTWGKPDVFGDVPAPREGHS-ASLIGDNLF 136
Query: 373 VFGGCGR------QGLLNDVFVLDLDAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLVV 425
VFGGCG+ + ND+ VL+ + W ++S G P+PR H +C + VV
Sbjct: 137 VFGGCGKSSDPSEEEYYNDLHVLNTNTF--VWKKMSTTGVSPIPRDSH-TCSSYKNCFVV 193
Query: 426 SGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSP-PSRLGHSLSVYGRTKVLMFGGLAK 484
GG L+D ++LD T+ WRE+ T+ + R GH+ +G+ +++FGG +
Sbjct: 194 MGGEDGGNAYLNDVHILD--TETMAWREVKTTGAELMPRAGHTTISHGKY-LVVFGGFSD 250
Query: 485 SGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIII 544
R + +T+DL + S P PR S+ R I+
Sbjct: 251 D---RKLFNDVHTLDL-----------TTGVWATSNPSGPGPSPRFSLAGDSVDAERGIL 296
Query: 545 F--GGSIAGLHSPSQLFLL------------DPSEEKPSWR 571
F GG L + ++ L DPSE K S R
Sbjct: 297 FFYGGCNEELEALDDMYFLDTGWLLLLLTEKDPSEPKLSMR 337
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 132/313 (42%), Gaps = 26/313 (8%)
Query: 307 CNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSL 366
CN A N + +FGG G + +D V ++ W + +K + P S+
Sbjct: 25 CN----AVRNLIYIFGGYGRDECQTNDVHVFDIGIRTYTWSKPVMKGAHPSPRDSHSSTA 80
Query: 367 NGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVS 426
GS L VFGG L+D+FVLD +V G P PR HS+ +I G L V
Sbjct: 81 VGSKLYVFGGTDGTSPLDDLFVLDTATNTWGKPDVFGDV-PAPREGHSASLI-GDNLFVF 138
Query: 427 GGCTDAGVLLSDTYLLD---LTTDKPMWREIPTSW-SPPSRLGHSLSVYGRTKVLMFGGL 482
GGC + + Y D L T+ +W+++ T+ SP R H+ S Y V+M G
Sbjct: 139 GGCGKSSDPSEEEYYNDLHVLNTNTFVWKKMSTTGVSPIPRDSHTCSSYKNCFVVMGGED 198
Query: 483 AKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRI 542
+ +L + + +D E W++++ G++ PR H +S +
Sbjct: 199 GGNAYLN----DVHILDT--ETMAWREVKT-----TGAELM----PRAGHTTISH-GKYL 242
Query: 543 IIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGH 602
++FGG + + LD + + + PG P+F+ + + GG
Sbjct: 243 VVFGGFSDDRKLFNDVHTLDLTTGVWATSNPSGPGPSPRFSLAGDSVDAERGILFFYGGC 302
Query: 603 TGEEWVLNELHEL 615
E L++++ L
Sbjct: 303 NEELEALDDMYFL 315
>gi|58582770|ref|YP_201786.1| sensor histidine kinase [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 428
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D PD PI++ N+ F TGY A+EV+G NCRFLQ P DP
Sbjct: 36 TTRMPMTVTDPHLPDNPIVFANRAFLEMTGYSAEEVIGNNCRFLQ---------GPETDP 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+S++R+ +E EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 87 ASISDVRQSIETRSEFATEVLNYRKDGSSFWNALFVSPVFDDHGNLVYFFGSQL 140
>gi|27807565|dbj|BAC55267.1| phytochrome 3 [Onoclea sensibilis]
Length = 692
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 11/113 (9%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
TSFVV DA D PIIY + F TGY + EV+G NCRFLQ P +P V+
Sbjct: 235 TSFVVVDALKLDLPIIYASTGFFNLTGYTSREVIGGNCRFLQ---------GPETNPAVI 285
Query: 115 SEIRRCL-EEGI-EFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR L +G F G LLN++KDG+ N L +API+DD GT+ ++IG+Q+
Sbjct: 286 DSIREALVPQGTGTFCGRLLNYRKDGSSFWNLLTIAPIKDDSGTIVNLIGVQL 338
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ D P PII+ + F T Y +EVLG NCRFLQ RD D V
Sbjct: 505 SFVITDPRLPGNPIIFASDQFLELTEYSREEVLGENCRFLQGRD---------TDRKAVQ 555
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNH 175
IR +EEG + +LLN+ K G P N L +RD G + + IG+Q ++ + H
Sbjct: 556 LIRDAVEEGRDVTVQLLNYTKGGRPFWNLFHLQAMRDKKGNLQYFIGVQQETDTPDRVEH 615
Query: 176 VSYPVFKENCNQQYDQSAQ 194
V + Q D +A+
Sbjct: 616 EKAKVVRATA-QNVDVAAR 633
>gi|2754823|gb|AAC05083.1| NPH1-1 [Avena sativa]
Length = 923
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA P PI+Y + F TGY + EV+GRNCRFLQ DP ++
Sbjct: 137 TFVVSDASRPGHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPAEIA 187
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR+ L G + G +LN+KKDGT N L +API+D++G V IG+Q+
Sbjct: 188 KIRQALANGSNYCGRVLNYKKDGTAFWNLLTIAPIKDEEGRVLKFIGMQV 237
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 414 NFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQ---------GPETDRATVR 464
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 465 KIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 514
>gi|297815732|ref|XP_002875749.1| hypothetical protein ARALYDRAFT_484960 [Arabidopsis lyrata subsp.
lyrata]
gi|297321587|gb|EFH52008.1| hypothetical protein ARALYDRAFT_484960 [Arabidopsis lyrata subsp.
lyrata]
Length = 994
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV+DA PD+PI+Y + F TGY + EV+GRNCRFLQ A ++
Sbjct: 198 TFVVSDATKPDYPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSGTDADE---------LA 248
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR L G + G LLN+KKDGT N L +API+D+ G V IG+Q+
Sbjct: 249 KIRETLAAGNNYCGRLLNYKKDGTSFWNLLTIAPIKDESGKVLKFIGMQV 298
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 476 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDLTTVK 526
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 527 KIRNAIDNQTEVTVQLINYTKSGKKFWNIFHLQPMRDQKGEVQYFIGVQL 576
>gi|281205228|gb|EFA79421.1| RING zinc finger-containing protein [Polysphondylium pallidum
PN500]
Length = 498
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 122/274 (44%), Gaps = 31/274 (11%)
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
EW+R+ V SP RWGH SL+ +VFGG G + ND+ + + + + IE G
Sbjct: 4 EWKRLGVGGSPEARWGHVTVSLSNGAFLVFGGNGNK-TFNDLTLYNSGSNSWSKIEPQGN 62
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMW-REIPTSWSPPSR 463
PP PR HS+ G ++++ GG ++ T L D+ W + SP R
Sbjct: 63 -PPAPRYGHSATPF-GQQILIYGGRANSKPFSDVTVLQHQGGDRFKWLKSQHQHKSPEGR 120
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSA 523
GH+ Y ++++FGG S + S ++ ID G+ W Q C+
Sbjct: 121 AGHTAIAY-NNQLIVFGGHNSSRNKYYNSVLTFNIDTGN----WDQPTCD---------G 166
Query: 524 VVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFA 583
VPP R H + + +FGG G + L LD L G PK
Sbjct: 167 AVPPARGSHSTFQV-GNHMYVFGG-FDGKKYYNDLHCLD----------LECKGNSPKPR 214
Query: 584 WGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCL 617
GHS+ ++ G R+++ GG + LN++H L L
Sbjct: 215 SGHSSTLM-GDRLVIFGGCGSDSNFLNDVHLLSL 247
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPM-DDTFVLNLDAANPEWRRVSV 351
W K + R +A A N+L++FGG + + N+D N W + +
Sbjct: 107 WLKSQHQHKSPEGRAGHTAIAYNNQLIVFGGHNSSRNKYYNSVLTFNIDTGN--WDQPTC 164
Query: 352 KSS-PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
+ PP R H+ + G+ + VFGG + ND+ LDL+ K G P PR
Sbjct: 165 DGAVPPARGSHSTFQV-GNHMYVFGGFDGKKYYNDLHCLDLECK---------GNSPKPR 214
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWRE--IPTSWSPPSRLGHSL 468
S HSS ++ G +LV+ GGC L+D +LL L D W + + +P R H+
Sbjct: 215 SGHSSTLM-GDRLVIFGGCGSDSNFLNDVHLLSL--DDMRWEQPVMAGMENPHPRFRHTA 271
Query: 469 SVYGRTKVLMFGGLAKSGHLRL 490
+ G+ KV ++ G + +L
Sbjct: 272 NSMGQNKVFIYAGTGSASEDQL 293
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 116/280 (41%), Gaps = 46/280 (16%)
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP-EWRRVS 350
W K +G R SA G +++++GG N +P D VL + +W +
Sbjct: 53 SWSKIEPQGNPPAPRYGHSATPFGQQILIYGGR-ANSKPFSDVTVLQHQGGDRFKWLKSQ 111
Query: 351 VK-SSPPGRWGHTLSSLNGSWLVVFGG--CGRQGLLNDVFVLDLDA---KQPTWIEVSGG 404
+ SP GR GHT + N L+VFGG R N V ++D QPT G
Sbjct: 112 HQHKSPEGRAGHTAIAYNNQ-LIVFGGHNSSRNKYYNSVLTFNIDTGNWDQPT----CDG 166
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
A P R HS+ + G+ + V GG D +D + LDL SP R
Sbjct: 167 AVPPARGSHSTFQV-GNHMYVFGGF-DGKKYYNDLHCLDLECKGN---------SPKPRS 215
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQWKQLECNAFTGVGSQ 521
GHS ++ G ++++FGG + + + + L D E+P +E
Sbjct: 216 GHSSTLMG-DRLVIFGGCGSDSNFL---NDVHLLSLDDMRWEQPVMAGMEN--------- 262
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLL 561
P PR H A SM ++ I+ G+ G S QL +
Sbjct: 263 ----PHPRFRHTANSMGQNKVFIYAGT--GSASEDQLLTM 296
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 45/317 (14%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W++ V G+ E + + + ++FGG G + +D + N + + W ++ +
Sbjct: 5 WKRLGVGGSPEARWGHVTVSLSNGAFLVFGGNG--NKTFNDLTLYN--SGSNSWSKIEPQ 60
Query: 353 SSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLD-AKQPTWIEVSG-GAPPLP 409
+PP R+GH+ + G ++++GG +DV VL + W++ P
Sbjct: 61 GNPPAPRYGHSATPF-GQQILIYGGRANSKPFSDVTVLQHQGGDRFKWLKSQHQHKSPEG 119
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPT--SWSPPSRLGHS 467
R+ H++ I ++L+V GG + ++ +L D W + PT PP+R HS
Sbjct: 120 RAGHTA-IAYNNQLIVFGGHNSSRNKYYNS-VLTFNIDTGNWDQ-PTCDGAVPPARGSHS 176
Query: 468 LSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPP 527
G + +FGG G+ Y DL LEC + P
Sbjct: 177 TFQVG-NHMYVFGGF---------DGKKYYNDL-----HCLDLECKGNS---------PK 212
Query: 528 PRLDHVAVSMPCGRIIIFG--GSIAGLHSPSQLFLLDPSE-EKPSWRILNVPGQPPKFAW 584
PR H + M R++IFG GS + + L LD E+P + P P+F
Sbjct: 213 PRSGHSSTLM-GDRLVIFGGCGSDSNFLNDVHLLSLDDMRWEQPVMAGMENPH--PRFR- 268
Query: 585 GHSTCVVGGTRVLVLGG 601
H+ +G +V + G
Sbjct: 269 -HTANSMGQNKVFIYAG 284
>gi|222422849|dbj|BAH19411.1| AT3G45780 [Arabidopsis thaliana]
Length = 826
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 12/135 (8%)
Query: 31 GGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGR 90
GG G LK L + T FVV+DA PD+PI+Y + F TGY + EV+GR
Sbjct: 176 GGRSGIPRVSEDLKDALSTFQQT---FVVSDATKPDYPIMYASAGFFNMTGYTSKEVVGR 232
Query: 91 NCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPI 150
NCRFLQ A +++IR L G + G +LN+KKDGT N L +API
Sbjct: 233 NCRFLQGSGTDADE---------LAKIRETLAAGNNYCGRILNYKKDGTSFWNLLTIAPI 283
Query: 151 RDDDGTVTHIIGIQI 165
+D+ G V IG+Q+
Sbjct: 284 KDESGKVLKFIGMQV 298
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 476 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDLTTVK 526
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 527 KIRNAIDNQTEVTVQLINYTKSGKKFWNIFHLQPMRDQKGEVQYFIGVQL 576
>gi|289661717|ref|ZP_06483298.1| histidine kinase [Xanthomonas campestris pv. vasculorum NCPPB 702]
Length = 541
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D PD PI++ N+ F TGY ADEV+G NCRFLQ P DP
Sbjct: 36 TTRMPMTVTDPHLPDNPIVFANRAFLEMTGYSADEVIGNNCRFLQ---------GPETDP 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+S++R +E EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 87 ASISDVRESIEARSEFATEVLNYRKDGSSFWNALFVSPVFDDKGNLVYFFGSQL 140
>gi|390991282|ref|ZP_10261551.1| blue-light-activated protein [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372554009|emb|CCF68526.1| blue-light-activated protein [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 540
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D PD PI++ N+ F TGY ADEV+G NCRFLQ P DP
Sbjct: 36 TTRMPMTVTDPHLPDNPIVFANRAFLEMTGYAADEVIGNNCRFLQ---------GPETDP 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+S++R +E EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 87 ASISDVRESIESRREFATEVLNYRKDGSSFWNALFISPVFDDKGNLVYFFGSQL 140
>gi|15231245|ref|NP_190164.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana]
gi|79314333|ref|NP_001030814.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana]
gi|25090817|sp|O48963.1|PHOT1_ARATH RecName: Full=Phototropin-1; AltName: Full=Non-phototropic
hypocotyl protein 1; AltName: Full=Root phototropism
protein 1
gi|13430612|gb|AAK25928.1|AF360218_1 putative nonphototropic hypocotyl 1 protein [Arabidopsis thaliana]
gi|2832241|gb|AAC01753.1| nonphototropic hypocotyl 1 [Arabidopsis thaliana]
gi|7019644|emb|CAB75791.1| nonphototropic hypocotyl 1 [Arabidopsis thaliana]
gi|14532876|gb|AAK64120.1| putative nonphototropic hypocotyl 1 protein [Arabidopsis thaliana]
gi|332644551|gb|AEE78072.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana]
gi|332644552|gb|AEE78073.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana]
Length = 996
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 12/135 (8%)
Query: 31 GGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGR 90
GG G LK L + T FVV+DA PD+PI+Y + F TGY + EV+GR
Sbjct: 176 GGRSGIPRVSEDLKDALSTFQQT---FVVSDATKPDYPIMYASAGFFNMTGYTSKEVVGR 232
Query: 91 NCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPI 150
NCRFLQ A +++IR L G + G +LN+KKDGT N L +API
Sbjct: 233 NCRFLQGSGTDADE---------LAKIRETLAAGNNYCGRILNYKKDGTSFWNLLTIAPI 283
Query: 151 RDDDGTVTHIIGIQI 165
+D+ G V IG+Q+
Sbjct: 284 KDESGKVLKFIGMQV 298
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 476 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDLTTVK 526
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 527 KIRNAIDNQTEVTVQLINYTKSGKKFWNIFHLQPMRDQKGEVQYFIGVQL 576
>gi|21243288|ref|NP_642870.1| histidine kinase [Xanthomonas axonopodis pv. citri str. 306]
gi|21108826|gb|AAM37406.1| sensor histidine kinase [Xanthomonas axonopodis pv. citri str. 306]
Length = 540
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D PD PI++ N+ F TGY ADEV+G NCRFLQ P DP
Sbjct: 36 TTRMPMTVTDPHLPDNPIVFANRAFLEMTGYAADEVIGNNCRFLQ---------GPETDP 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+S++R +E EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 87 ASISDVRESIESRREFATEVLNYRKDGSSFWNALFISPVFDDKGNLVYFFGSQL 140
>gi|302837812|ref|XP_002950465.1| phototropin [Volvox carteri f. nagariensis]
gi|300264470|gb|EFJ48666.1| phototropin [Volvox carteri f. nagariensis]
Length = 744
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 9/117 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVVADA PD P++Y ++ F TGY DEVLG NCRFLQ DP V
Sbjct: 21 TFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEG---------TDPKEVQ 71
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
+IR +++G LLN++KDGTP N L + PI+ DG V+ +G+Q+ +K +
Sbjct: 72 KIREAIKKGEACSVRLLNYRKDGTPFWNLLTVTPIKTPDGKVSKFVGVQVDVTSKTE 128
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++D PD PI++ + F TGY ++VLGRNCRFLQ P D V
Sbjct: 215 NFVISDPTLPDCPIVFASDAFLELTGYSREDVLGRNCRFLQ---------GPGTDSATVD 265
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR + G E +LN+ K G P N +AP+RD DG+V +G+Q+
Sbjct: 266 QIREAIRTGTEITVRILNYTKQGRPFWNMFTMAPMRDQDGSVRFFVGVQV 315
>gi|335424979|ref|ZP_08553972.1| hypothetical protein SSPSH_19791 [Salinisphaera shabanensis E1L3A]
gi|334887110|gb|EGM25449.1| hypothetical protein SSPSH_19791 [Salinisphaera shabanensis E1L3A]
Length = 333
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
+ADA D P+I+VN FE TGY DEVLGRNCRFLQ + +DP +E+
Sbjct: 19 AIADARAEDLPLIFVNPAFERMTGYSHDEVLGRNCRFLQ---------NGRIDPESRAEM 69
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R L +G F + N++KD TP N L ++PI + G VTH IG Q
Sbjct: 70 RAALRKGQGFSKVVTNYRKDDTPFWNELSISPIHTERGAVTHFIGFQ 116
>gi|156039633|ref|XP_001586924.1| hypothetical protein SS1G_11953 [Sclerotinia sclerotiorum 1980]
gi|154697690|gb|EDN97428.1| hypothetical protein SS1G_11953 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 941
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 78/140 (55%), Gaps = 6/140 (4%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ--RRHPLVDPVV 113
+FVV D +PD PIIYV+ VFE TGY EVLGRNCRFLQ + + Q R +
Sbjct: 326 AFVVCDLREPDCPIIYVSDVFENLTGYSRHEVLGRNCRFLQSPEGKIQAGERRLDTENDK 385
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPI--RDDDGTVTHIIGIQIFSEAKI 171
V E+++ ++ E Q ++N++K G P +N L + PI DDD T++ ++G Q+ +
Sbjct: 386 VYELKKAIDTRTETQQAIINYRKGGQPFMNLLTMIPIPASDDDPTLSLVVGFQV--DVVA 443
Query: 172 DLNHVSYPVFKENCNQQYDQ 191
+ N V+ N Y Q
Sbjct: 444 NPNSVNEKTTAGNYTMNYKQ 463
>gi|418517131|ref|ZP_13083298.1| histidine kinase [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
gi|418520507|ref|ZP_13086556.1| histidine kinase [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410703888|gb|EKQ62376.1| histidine kinase [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410706188|gb|EKQ64651.1| histidine kinase [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
Length = 540
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D PD PI++ N+ F TGY ADEV+G NCRFLQ P DP
Sbjct: 36 TTRMPMTVTDPHLPDNPIVFANRAFLEMTGYAADEVIGNNCRFLQ---------GPETDP 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+S++R +E EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 87 ASISDVRESIESRREFATEVLNYRKDGSSFWNALFISPVFDDKGNLVYFFGSQL 140
>gi|294626164|ref|ZP_06704770.1| sensor histidine kinase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294667549|ref|ZP_06732764.1| sensor histidine kinase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292599516|gb|EFF43647.1| sensor histidine kinase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292602669|gb|EFF46105.1| sensor histidine kinase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 540
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D PD PI++ N+ F TGY ADEV+G NCRFLQ P DP
Sbjct: 36 TTRMPMTVTDPHLPDNPIVFANRAFLEMTGYAADEVIGNNCRFLQ---------GPDTDP 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+S++R +E EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 87 ASISDVRESIESRSEFATEVLNYRKDGSSFWNALFISPVFDDKGNLVYFFGSQL 140
>gi|254409941|ref|ZP_05023721.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
gi|196182977|gb|EDX77961.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
Length = 776
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V++DA PD PI+Y N FE TGY EV+GRNCRFLQ D +P VV +
Sbjct: 41 IVLSDAGKPDMPIVYCNPAFERITGYSRQEVVGRNCRFLQGVD---------TNPQVVEQ 91
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR+ L E + L N++KDGTP N L ++PIRD V + IG+Q
Sbjct: 92 IRQALRTEQEVKVVLKNYRKDGTPFWNELAISPIRDAKERVIYFIGVQ 139
>gi|336260111|ref|XP_003344852.1| vivid protein [Sordaria macrospora k-hell]
gi|380089049|emb|CCC12993.1| putative vivid protein [Sordaria macrospora k-hell]
Length = 185
Score = 93.6 bits (231), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/120 (38%), Positives = 69/120 (57%), Gaps = 6/120 (5%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPL 108
T + ++ D D PI+Y + F TGY + EVLGRNCRFLQ D P++ R++
Sbjct: 68 TSCALIMCDLKQKDQPIVYASDAFLYMTGYNSAEVLGRNCRFLQSPDGMVKPKSTRKY-- 125
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
VDP + +R+ +++ E Q E++NFKK+G VN L + P+RD+ G +G Q E
Sbjct: 126 VDPTTIKRMRKAIDKNAEVQVEVVNFKKNGQRFVNLLTMIPVRDETGEYRFSMGFQCEKE 185
>gi|346725425|ref|YP_004852094.1| histidine kinase [Xanthomonas axonopodis pv. citrumelo F1]
gi|346650172|gb|AEO42796.1| histidine kinase [Xanthomonas axonopodis pv. citrumelo F1]
Length = 540
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D PD PI++ N+ F TGY ADEV+G NCRFLQ P DP
Sbjct: 36 TTRMPMTVTDPHLPDNPIVFANRAFLEMTGYAADEVIGNNCRFLQ---------GPETDP 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+S++R +E EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 87 ASISDVRASIESRSEFATEVLNYRKDGSSFWNALFISPVFDDKGNLVYFFGSQL 140
>gi|75907252|ref|YP_321548.1| multi-sensor hybrid histidine kinase [Anabaena variabilis ATCC
29413]
gi|75700977|gb|ABA20653.1| multi-sensor hybrid histidine kinase [Anabaena variabilis ATCC
29413]
Length = 1820
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V++DA P++P+IYVN FE TGY+A E++GRNCRFLQ D P ++ E
Sbjct: 454 IVISDAKLPNYPVIYVNSAFEQITGYKATEIVGRNCRFLQGNDT----TQPAIE-----E 504
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R L+ G + L N++KDG+ N+L ++PI +D+G ++H IGIQ
Sbjct: 505 LRSALKAGKNCKVILRNYRKDGSLFWNQLSVSPIYNDNGQLSHFIGIQ 552
>gi|325925085|ref|ZP_08186505.1| PAS domain S-box [Xanthomonas perforans 91-118]
gi|325544501|gb|EGD15864.1| PAS domain S-box [Xanthomonas perforans 91-118]
Length = 540
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D PD PI++ N+ F TGY ADEV+G NCRFLQ P DP
Sbjct: 36 TTRMPMTVTDPHLPDNPIVFANRAFLEMTGYAADEVIGNNCRFLQ---------GPETDP 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+S++R +E EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 87 ASISDVRASIESRSEFATEVLNYRKDGSSFWNALFISPVFDDKGNLVYFFGSQL 140
>gi|284163953|ref|YP_003402232.1| PAS/PAC sensor protein [Haloterrigena turkmenica DSM 5511]
gi|284013608|gb|ADB59559.1| putative PAS/PAC sensor protein [Haloterrigena turkmenica DSM 5511]
Length = 644
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++YVN ++ TGY DEV+GRNCRFLQ D + V
Sbjct: 147 PVGITISDPDLEDNPLVYVNDAYQEITGYGYDEVVGRNCRFLQGEDSQ---------EVA 197
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+ ++E EL N++KDGT N + +AP+RD+DGTVTH +G Q
Sbjct: 198 IAEMAAAIDEERPVTVELKNYRKDGTEFWNEVTIAPVRDEDGTVTHYVGFQ 248
>gi|425778616|gb|EKV16734.1| GATA transcription factor LreA [Penicillium digitatum PHI26]
gi|425784178|gb|EKV21971.1| GATA transcription factor LreA [Penicillium digitatum Pd1]
Length = 869
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD--PRAQRRHPLVDPVV 113
+FV+ D D PI+YV++ FE TGY DE++GRNCRFLQ D +A + VD
Sbjct: 259 AFVMCDILIEDHPIVYVSEAFERLTGYTRDEIVGRNCRFLQTPDGKIKAGAKRSFVDGQT 318
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
V +R ++ E Q ++N++K G P +N + + PI+ D + +G QI K D
Sbjct: 319 VYRLRSTIDHRSEIQASIINYRKGGQPFMNLITMIPIQWDSDVYRYYVGFQIDLVEKPDA 378
Query: 174 NHVSYPVFKENCNQQYDQSAQYF 196
P + N Q DQ QY
Sbjct: 379 VRGRNPDGNYSINYQRDQLPQYM 401
>gi|289668671|ref|ZP_06489746.1| histidine kinase [Xanthomonas campestris pv. musacearum NCPPB 4381]
Length = 541
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D PD PI++ N+ F TGY ADEV+G NCRFLQ P DP
Sbjct: 36 TTRMPMTVTDPHLPDNPIVFANRAFLEMTGYSADEVIGNNCRFLQ---------GPETDP 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+S++R +E EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 87 ASISDVRESIEARSEFATEVLNYRKDGSSFWNALFVSPVFDDKGNLVYYFGSQL 140
>gi|149376152|ref|ZP_01893917.1| Two-component response regulator [Marinobacter algicola DG893]
gi|149359557|gb|EDM48016.1| Two-component response regulator [Marinobacter algicola DG893]
Length = 858
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 43/228 (18%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
P ++ DA PD P++Y N F TGY DEV+G NCRFLQ + +
Sbjct: 309 NPNGMLMVDARSPDMPVVYANPAFTEMTGYSYDEVMGSNCRFLQGEETALE--------- 359
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI--------- 163
+ IR+ L E EL+N++KDGTP N LR++P+ +DG TH IG
Sbjct: 360 ALETIRQGLHHQTEVNVELINYRKDGTPFWNHLRISPVFGNDGLCTHFIGTQQDVTHQRE 419
Query: 164 ---QIFSEAKIDL-----NHVSYPVFKENCNQQYDQSAQYFSGGHSPLS-QHQDICGILQ 214
QI +A DL N VS+ Q+ A GG L+ + D+ G
Sbjct: 420 QEAQITYQATHDLLTGLPNGVSF--------QETLHDALILDGGRGALAVLYLDLDGFKP 471
Query: 215 LSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWG 262
++DE L H++ +++ + ++ RR+ LT E + + +G
Sbjct: 472 INDE-LGHHVGNQV-------LITIARRLADLTAPEATVARLVGDEFG 511
>gi|304321705|ref|YP_003855348.1| sensory box histidine kinase [Parvularcula bermudensis HTCC2503]
gi|303300607|gb|ADM10206.1| sensory box histidine kinase [Parvularcula bermudensis HTCC2503]
Length = 361
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 19 GSGKRQKCSFEGGGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEI 78
+ K G G G +TEL L+ + P +FV+ + D PI+YVN+ FE
Sbjct: 7 NASKNATAQLVGTGSGSIPETELRLRA----FERFPIAFVLTNPGLEDNPIVYVNRAFEN 62
Query: 79 FTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDG 138
TGY A+ LGRNCRFLQ P D V ++R L+ + LLN++ DG
Sbjct: 63 LTGYAAEVSLGRNCRFLQ---------GPDTDKEAVKKMREHLQRAAPVETVLLNYRSDG 113
Query: 139 TPLVNRLRLAPIRDDDGTVTHIIGIQ 164
P N LR+ PI DD G ++ +G+Q
Sbjct: 114 KPFRNYLRIEPIFDDSGQLSCFLGLQ 139
>gi|78048310|ref|YP_364485.1| histidine kinase [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|78036740|emb|CAJ24433.1| sensory box histidine kinase/response regulator [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 540
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D PD PI++ N+ F TGY ADEV+G NCRFLQ P DP
Sbjct: 36 TTRMPMTVTDPHLPDNPIVFANRAFLEMTGYAADEVIGNNCRFLQ---------GPDTDP 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+S++R +E EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 87 ASISDVRASIESRSEFATEVLNYRKDGSSFWNALFISPVFDDKGNLVYFFGSQL 140
>gi|390957776|ref|YP_006421533.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Terriglobus roseus DSM 18391]
gi|390412694|gb|AFL88198.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Terriglobus roseus DSM 18391]
Length = 525
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 9/124 (7%)
Query: 49 FYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPL 108
+ + DA P P++YVN FE TGYR++EVLGR+C FLQ R+ R Q
Sbjct: 106 IFDAISNGITIGDAAQPGAPLLYVNSAFEEMTGYRSNEVLGRDCNFLQ-RNNRDQ----- 159
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
P VV +IR+ LEE E + L N++KDGTP N L L+PI D G +TH +GIQ
Sbjct: 160 --PGVV-KIRKALEERREERVLLRNYRKDGTPFWNELYLSPILDLKGRLTHFVGIQNDVT 216
Query: 169 AKID 172
A+++
Sbjct: 217 ARVN 220
>gi|322370523|ref|ZP_08045081.1| bacterio-opsin activator [Haladaptatus paucihalophilus DX253]
gi|320549940|gb|EFW91596.1| bacterio-opsin activator [Haladaptatus paucihalophilus DX253]
Length = 621
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 40 ELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD 99
EL LK + P +ADA D P++YVN+ FE TGY DEV G NCRFLQ
Sbjct: 115 ELDLKERAI--NEAPVGITIADAESGDQPLLYVNEAFEELTGYDFDEVQGHNCRFLQGEH 172
Query: 100 PRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTH 159
A V+ +R ++ ELLN++KDGT NR+ +APIRD+ GTVTH
Sbjct: 173 SDAD---------AVAAMRDAIDAEEPVSVELLNYRKDGTEFWNRVDIAPIRDETGTVTH 223
Query: 160 IIGIQ 164
+G Q
Sbjct: 224 FVGFQ 228
>gi|326428103|gb|EGD73673.1| hypothetical protein PTSG_05386 [Salpingoeca sp. ATCC 50818]
Length = 526
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 154/343 (44%), Gaps = 45/343 (13%)
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQ----PMDDTFVL-NLDAANPE 345
V W+ + G E S + A R VL GG VN P D +VL NLD+A P+
Sbjct: 5 VEWKPVSGNGPRERSAHACAVDEASGRFVLHGGVTVNADGDPIPNGDVWVLKNLDSA-PQ 63
Query: 346 WRRVSVKSSPP-GRWGHTLSSLNG-SWLVVFGGC--GRQGLLNDVFVLDLDAKQPTWIEV 401
W V K P R GHTL+ + + V+F G + NDV+ LD + TW V
Sbjct: 64 WEPVRAKGDVPCKREGHTLTYVPAKNMFVLFAGSDGALEKEFNDVYTLD---ESLTWKRV 120
Query: 402 -SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSP 460
+ G PP PR H++ +++ + L V GG D G +D + LDL T MW + + P
Sbjct: 121 ETKGVPPAPRLNHAADVVDDA-LYVFGGFED-GQAKNDMFKLDLNT--MMWTPVHANNPP 176
Query: 461 PSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGS 520
R HS++ G +K+ +FGG L + + D E A+T V
Sbjct: 177 SRRCNHSMTAVG-SKLYVFGGRGGEATL---YNDLFCFD----------TESRAWTAV-- 220
Query: 521 QSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSP------SQLFLLDPSEEKPSWRILN 574
++ PP D + + ++ +FGGS+ + S + + + D + + +W
Sbjct: 221 KAGGQPPTARDFHSAATFGDKVFVFGGSME-IESKDIFTYYNDVVVFDTTRQ--AWVRPQ 277
Query: 575 VPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCL 617
V G P W H+ V +++V GG T + L++ H L +
Sbjct: 278 VSGAVPSVRWAHAAAVYKN-KMIVFGG-TANDVDLSDTHILTI 318
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 16/219 (7%)
Query: 279 GRLARELTTL----EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDT 334
G L +E + E++ W++ +G R N +A + L +FGG + Q +D
Sbjct: 99 GALEKEFNDVYTLDESLTWKRVETKGVPPAPRLNHAADVVDDALYVFGG-FEDGQAKNDM 157
Query: 335 FVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLDLDA 393
F L+L+ W V + P R H+++++ GS L VFGG G + L ND+F D ++
Sbjct: 158 FKLDLNTMM--WTPVHANNPPSRRCNHSMTAV-GSKLYVFGGRGGEATLYNDLFCFDTES 214
Query: 394 KQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLT---TDKPM 450
+ T ++ +GG PP R +HS+ G K+ V GG + TY D+ T +
Sbjct: 215 RAWTAVK-AGGQPPTARDFHSAATF-GDKVFVFGGSMEIESKDIFTYYNDVVVFDTTRQA 272
Query: 451 WREIPTSWSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHL 488
W S + PS R H+ +VY + K+++FGG A L
Sbjct: 273 WVRPQVSGAVPSVRWAHAAAVY-KNKMIVFGGTANDVDL 310
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 306 RCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPP-GRWGHTLS 364
RCN S A G++L +FGG G +D F D + W V PP R H+ +
Sbjct: 179 RCNHSMTAVGSKLYVFGGRGGEATLYNDLFCF--DTESRAWTAVKAGGQPPTARDFHSAA 236
Query: 365 SLNGSWLVVFGGCGRQ------GLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCII 418
+ G + VFGG NDV V D + +VSG P + R W + +
Sbjct: 237 TF-GDKVFVFGGSMEIESKDIFTYYNDVVVFDTTRQAWVRPQVSGAVPSV-R-WAHAAAV 293
Query: 419 EGSKLVVSGGCTDAGVLLSDTYLLDLT 445
+K++V GG + V LSDT++L +T
Sbjct: 294 YKNKMIVFGGTAN-DVDLSDTHILTIT 319
>gi|448597599|ref|ZP_21654524.1| bacterio-opsin activator [Haloferax alexandrinus JCM 10717]
gi|445739060|gb|ELZ90569.1| bacterio-opsin activator [Haloferax alexandrinus JCM 10717]
Length = 658
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P VAD PD P++YVN+ FE TGY AD LGRNCR+LQ P DP
Sbjct: 143 PVGITVADCSLPDRPLVYVNEAFETMTGYSADAALGRNCRYLQ---------GPNTDPER 193
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ +RR +E ELLN++ +G NR+ +AP+ DG VTH +G Q
Sbjct: 194 VAALRRAIEAEESASVELLNYRANGETFWNRVDVAPLSGPDGEVTHYVGFQ 244
>gi|172038851|ref|YP_001805352.1| two-component response regulator [Cyanothece sp. ATCC 51142]
gi|354556166|ref|ZP_08975463.1| response regulator receiver modulated diguanylate cyclase
[Cyanothece sp. ATCC 51472]
gi|171700305|gb|ACB53286.1| two-component response regulator [Cyanothece sp. ATCC 51142]
gi|353551870|gb|EHC21269.1| response regulator receiver modulated diguanylate cyclase
[Cyanothece sp. ATCC 51472]
Length = 483
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 38 DTELSLKPGLLF--YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFL 95
+ ++ L+ LL+ T S V+ DA D+PIIYVN FE TGY +EV G+NCRFL
Sbjct: 156 NQKIPLESYLLYEAIAATNNSIVITDATASDYPIIYVNPGFETMTGYSLEEVTGKNCRFL 215
Query: 96 QYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDG 155
Q D R+ P ++ EIR CL++G L N++KDG+ N + L+PI+D+ G
Sbjct: 216 QESD----RQQPQLE-----EIRHCLQQGQPCHVTLRNYRKDGSLFWNEMSLSPIKDESG 266
Query: 156 TVTHIIGIQ 164
+ + + +Q
Sbjct: 267 KIIYYLAVQ 275
>gi|20797092|emb|CAC94940.1| putative blue light receptor [Chlamydomonas reinhardtii]
Length = 750
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 9/117 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVVADA PD P++Y ++ F TGY DEVLG NCRFLQ DP V
Sbjct: 21 TFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEG---------TDPKEVQ 71
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
+IR +++G LLN++KDGTP N L + PI+ DG V+ +G+Q+ +K +
Sbjct: 72 KIRDAIKKGEACSVRLLNYRKDGTPFWNLLTVTPIKTPDGRVSKFVGVQVDVTSKTE 128
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+F ++D PD PI++ + F TGY +EVLGRNCRFLQ D V
Sbjct: 214 NFCISDPTLPDCPIVFASDAFLELTGYSREEVLGRNCRFLQGAG---------TDRGTVD 264
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++EG E +LN+ K G N LAP+RD DG +G+Q+
Sbjct: 265 QIRAAIKEGSELTVRILNYTKAGKAFWNMFTLAPMRDQDGHARFFVGVQV 314
>gi|448573345|ref|ZP_21640929.1| bacterio-opsin activator [Haloferax lucentense DSM 14919]
gi|445719110|gb|ELZ70793.1| bacterio-opsin activator [Haloferax lucentense DSM 14919]
Length = 658
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P VAD PD P++YVN+ FE TGY AD LGRNCR+LQ P DP
Sbjct: 143 PVGITVADCSLPDRPLVYVNEAFETMTGYSADAALGRNCRYLQ---------GPNTDPER 193
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ +RR +E ELLN++ +G NR+ +AP+ DG VTH +G Q
Sbjct: 194 VAALRRAIEAEESASVELLNYRANGETFWNRVDVAPLSGPDGEVTHYVGFQ 244
>gi|320587293|gb|EFW99773.1| gata transcription factor [Grosmannia clavigera kw1407]
Length = 1185
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 17/143 (11%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV DA D+PIIYV+ F+ TGY + E++G+NCRFLQ D + A R D
Sbjct: 438 AFVVCDATLNDYPIIYVSDNFQHLTGYSSYEIIGQNCRFLQAPDGKVEAGSRREFTDNKA 497
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDD--GTVTHIIGIQI------ 165
V +++ LE G E Q L+N++K G P +N L + PI DD G + IG+QI
Sbjct: 498 VYNLKQKLESGREVQQSLINYRKGGKPFLNLLTMIPIPWDDYKGGYKYFIGLQIDLVESP 557
Query: 166 -------FSEAKIDLNHVSYPVF 181
+ID +H + P +
Sbjct: 558 DAISGQSTHSVRIDYSHSNIPQY 580
>gi|448543688|ref|ZP_21625242.1| bacterio-opsin activator [Haloferax sp. ATCC BAA-646]
gi|448550780|ref|ZP_21629083.1| bacterio-opsin activator [Haloferax sp. ATCC BAA-645]
gi|448558827|ref|ZP_21633240.1| bacterio-opsin activator [Haloferax sp. ATCC BAA-644]
gi|445706411|gb|ELZ58294.1| bacterio-opsin activator [Haloferax sp. ATCC BAA-646]
gi|445711285|gb|ELZ63079.1| bacterio-opsin activator [Haloferax sp. ATCC BAA-645]
gi|445712060|gb|ELZ63845.1| bacterio-opsin activator [Haloferax sp. ATCC BAA-644]
Length = 658
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P +AD PD P++YVN+ FE TGY AD LGRNCR+LQ P DP
Sbjct: 143 PVGITIADCSLPDRPLVYVNEAFETMTGYSADAALGRNCRYLQ---------GPNTDPER 193
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ +RR +E ELLN++ +G NR+ +AP+ DG VTH +G Q
Sbjct: 194 VAALRRAIEAEESASVELLNYRANGETFWNRVDIAPLSGPDGEVTHYVGFQ 244
>gi|255945187|ref|XP_002563361.1| Pc20g08380 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588096|emb|CAP86167.1| Pc20g08380 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 852
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 76/144 (52%), Gaps = 2/144 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FV+ D D PI+YV++ FE TGY +E++GRNCRFLQ D R A + VD
Sbjct: 259 AFVMCDILTEDHPIVYVSEAFERLTGYTKNEIVGRNCRFLQAPDGRISAGAKRTFVDGQT 318
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
V +R +++ E Q ++N++K G P +N + + PI+ D + +G Q+ K D
Sbjct: 319 VYRLRSTIDDRSEIQASIINYRKGGQPFMNLITMIPIQWDSDVYRYYVGFQVDLVEKPDA 378
Query: 174 NHVSYPVFKENCNQQYDQSAQYFS 197
P + N + DQ QY +
Sbjct: 379 VRGRNPDGNYSINYRRDQLPQYIA 402
>gi|428319523|ref|YP_007117405.1| PAS/PAC sensor signal transduction histidine kinase [Oscillatoria
nigro-viridis PCC 7112]
gi|428243203|gb|AFZ08989.1| PAS/PAC sensor signal transduction histidine kinase [Oscillatoria
nigro-viridis PCC 7112]
Length = 630
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T T ++DA DPD PIIY N FE TGYR E++G+N RFL D DP
Sbjct: 215 TSTGVTISDATDPDNPIIYCNPAFESMTGYRRQEIIGKNGRFLHGSD---------TDPA 265
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V IR+ L+ E + L N++KDGT N ++P+RD G +TH IG+Q
Sbjct: 266 AVEIIRQALQAESECKVILKNYRKDGTAFWNCFSISPVRDRMGNLTHFIGVQ 317
>gi|159470479|ref|XP_001693387.1| phototropin [Chlamydomonas reinhardtii]
gi|158277645|gb|EDP03413.1| phototropin [Chlamydomonas reinhardtii]
Length = 750
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 9/117 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVVADA PD P++Y ++ F TGY DEVLG NCRFLQ DP V
Sbjct: 21 TFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEG---------TDPKEVQ 71
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
+IR +++G LLN++KDGTP N L + PI+ DG V+ +G+Q+ +K +
Sbjct: 72 KIRDAIKKGEACSVRLLNYRKDGTPFWNLLTVTPIKTPDGRVSKFVGVQVDVTSKTE 128
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+F ++D PD PI++ + F TGY +EVLGRNCRFLQ D V
Sbjct: 214 NFCISDPTLPDCPIVFASDAFLELTGYSREEVLGRNCRFLQGAG---------TDRGTVD 264
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++EG E +LN+ K G N LAP+RD DG +G+Q+
Sbjct: 265 QIRAAIKEGSELTVRILNYTKAGKAFWNMFTLAPMRDQDGHARFFVGVQV 314
>gi|154295124|ref|XP_001547999.1| hypothetical protein BC1G_13505 [Botryotinia fuckeliana B05.10]
Length = 1159
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ--RRHPLVDPVV 113
+FVV D + D PIIYV+ VFE TGY EVLGRNCRFLQ D + Q R +
Sbjct: 378 AFVVCDLRETDCPIIYVSDVFENLTGYSRHEVLGRNCRFLQSPDGKIQAGERRTATENDK 437
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPI--RDDDGTVTHIIGIQIFSEAK- 170
V E+++ ++ E Q ++N+++ G P +N L + PI DDD T++ ++G Q+ A
Sbjct: 438 VYELKKAVDNRTETQQAIINYRRGGQPFMNLLTMIPIPASDDDPTLSLVVGFQVDVVANP 497
Query: 171 IDLNHVSYPVFKENCNQ 187
++ VS ++ N Q
Sbjct: 498 TSIDGVSGGIYTMNYKQ 514
>gi|20797097|emb|CAC94941.1| putative blue light receptor [Chlamydomonas reinhardtii]
Length = 749
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 9/117 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVVADA PD P++Y ++ F TGY DEVLG NCRFLQ DP V
Sbjct: 21 TFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEG---------TDPKEVQ 71
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
+IR +++G LLN++KDGTP N L + PI+ DG V+ +G+Q+ +K +
Sbjct: 72 KIRDAIKKGEACSVRLLNYRKDGTPFWNLLTVTPIKTPDGRVSKFVGVQVDVTSKTE 128
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+F ++D PD PI++ + F TGY +EVLGRNCRFLQ D V
Sbjct: 214 NFCISDPTLPDCPIVFASDAFLELTGYSREEVLGRNCRFLQGAG---------TDRGTVD 264
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++EG E +LN+ K G N LAP+RD DG +G+Q+
Sbjct: 265 QIRAAIKEGSELTVRILNYTKAGKAFWNMFTLAPMRDQDGHARFFVGVQV 314
>gi|325915148|ref|ZP_08177474.1| PAS domain S-box [Xanthomonas vesicatoria ATCC 35937]
gi|325538670|gb|EGD10340.1| PAS domain S-box [Xanthomonas vesicatoria ATCC 35937]
Length = 519
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D PD PI++ N+ F TGY ADE++G NCRFLQ P DP
Sbjct: 15 TTRMPMTVTDPHLPDNPIVFANRAFLEMTGYSADEIIGNNCRFLQ---------GPETDP 65
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++R +E+ EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 66 ASVQDVRESIEQRREFATEVLNYRKDGSSFWNALFVSPVFDDQGNLVYFFGSQL 119
>gi|433431088|ref|ZP_20407593.1| bacterio-opsin activator, partial [Haloferax sp. BAB2207]
gi|432194173|gb|ELK50824.1| bacterio-opsin activator, partial [Haloferax sp. BAB2207]
Length = 575
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P VAD PD P++YVN+ FE TGY AD LGRNCR+LQ P DP
Sbjct: 60 PVGITVADCSLPDRPLVYVNEAFETMTGYSADAALGRNCRYLQ---------GPNTDPER 110
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ +RR +E ELLN++ +G NR+ +AP+ DG VTH +G Q
Sbjct: 111 VAALRRAIEAEESASVELLNYRANGETFWNRVDVAPLSGPDGEVTHYVGFQ 161
>gi|441415749|dbj|BAH80322.2| aureochrome1-like protein [Ochromonas danica]
Length = 312
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 12/128 (9%)
Query: 37 DDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ 96
DD + SL L T +FV++D PD PI+Y ++ F TGY EVLGRNCRFLQ
Sbjct: 178 DDPDYSLVKAL---QTAQQNFVISDPSIPDNPIVYASQGFLTLTGYALSEVLGRNCRFLQ 234
Query: 97 YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGT 156
P DP V ++R+ LE G + LLN++KDG+ N+L +A +RD +G
Sbjct: 235 ---------GPETDPKAVEKVRKGLERGEDTTVVLLNYRKDGSTFWNQLFIAALRDGEGN 285
Query: 157 VTHIIGIQ 164
V + +G+Q
Sbjct: 286 VVNYLGVQ 293
>gi|159481943|ref|XP_001699034.1| flagellar associated protein [Chlamydomonas reinhardtii]
gi|378548300|sp|A8JAM0.1|CC135_CHLRE RecName: Full=Coiled-coil domain-containing protein lobo homolog;
AltName: Full=Flagellar-associated protein 50
gi|158273297|gb|EDO99088.1| flagellar associated protein [Chlamydomonas reinhardtii]
Length = 1159
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 11/203 (5%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSAC--AAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
T++ + W +G P R N +AC NRLV+FGG + ++D + L+LD+
Sbjct: 331 TMDRMEWHNQPCKGEKPPPRYNHAACYDEENNRLVVFGGRTAERKRLNDIYFLDLDSWT- 389
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
W + S + + P +++ +V+FGG G ND+F+LDL A Q + SG
Sbjct: 390 -WFKPSTEGTAPTPREQAVATFWAGSMVLFGGHAIGGRTNDLFLLDLGAWQWSQPAFSGT 448
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-PPSR 463
AP PR + CI G+ L V GG + +L D +++D + W EIP PP R
Sbjct: 449 APS-PRQACALCIGHGNLLFVHGGRNN--FVLEDLHVMDFVSKN--WTEIPCEGRVPPPR 503
Query: 464 LGHSLSVYGRTKVLMFGGLAKSG 486
H ++V+ R ++ + GGL + G
Sbjct: 504 HSHRITVH-RDQLYLLGGLDELG 525
>gi|421505515|ref|ZP_15952453.1| PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase [Pseudomonas mendocina DLHK]
gi|400343924|gb|EJO92296.1| PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase [Pseudomonas mendocina DLHK]
Length = 1254
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 76/165 (46%), Gaps = 22/165 (13%)
Query: 48 LFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP 107
L +P +ADA PD P++Y N F TGY ADE LGRNCRFL D P
Sbjct: 318 LAMEASPLGVTIADARQPDLPLVYCNAAFTQITGYSADEALGRNCRFLVADDHAQLELQP 377
Query: 108 LVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFS 167
L R L EG + N++KDG P N + LAP+RD+ G ++H +G+Q
Sbjct: 378 L---------RSALREGRSGHAVVRNYRKDGRPFWNEVVLAPMRDERG-ISHFVGLQQDV 427
Query: 168 EAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGI 212
+++L Q Q AQ H SQ +DI +
Sbjct: 428 TERVEL-----------AAQVEQQRAQLLRQNHL-FSQTEDIANL 460
>gi|146305401|ref|YP_001185866.1| PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase [Pseudomonas mendocina ymp]
gi|145573602|gb|ABP83134.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Pseudomonas mendocina ymp]
Length = 1254
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 76/165 (46%), Gaps = 22/165 (13%)
Query: 48 LFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP 107
L +P +ADA PD P++Y N F TGY ADE LGRNCRFL D P
Sbjct: 318 LAMEASPLGVTIADARQPDLPLVYCNAAFTQITGYSADETLGRNCRFLVADDHAQLELQP 377
Query: 108 LVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFS 167
L R L EG + N++KDG P N + LAP+RD+ G ++H +G+Q
Sbjct: 378 L---------RSALREGRSGHAVVRNYRKDGRPFWNEVVLAPMRDERG-ISHFVGLQQDV 427
Query: 168 EAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGI 212
+++L Q Q AQ H SQ +DI +
Sbjct: 428 TERVEL-----------AAQVEQQRAQLLRQNHL-FSQTEDIANL 460
>gi|356562638|ref|XP_003549576.1| PREDICTED: kelch domain-containing protein 3-like [Glycine max]
Length = 609
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 128/265 (48%), Gaps = 30/265 (11%)
Query: 358 RWGHTLSSLNGSWLV-VFGGCGRQGL-LNDVFVLDLDAKQPTWIEVS-GGAPPLPRSWHS 414
RWGHT +++ G LV VFGG G+ N V V D KQ TW + + G+PP PR H+
Sbjct: 26 RWGHTCNAVKGGRLVYVFGGYGKDNCQTNQVHVFDT-VKQ-TWSQPALKGSPPTPRDSHT 83
Query: 415 SCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPT--SWSPPSRLGHSLSVYG 472
S + G L V GG TD L D ++LD T W PT PP+R GHS +V G
Sbjct: 84 STAV-GDNLFVFGG-TDGMNPLKDLHILD--TSLQTWVS-PTIRGEGPPAREGHSAAVVG 138
Query: 473 RTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDH 532
+ ++ +FGG KS + E Y DL L F + ++ PP D
Sbjct: 139 K-RLFIFGGCGKSAD---NNNELYYNDL-------YILNAETFVWKCATTSGTPPSPRDS 187
Query: 533 VAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ--PPKFAWGHSTCV 590
+ S +II+ GG + S + +LD + WR L+ GQ PP+ GHST V
Sbjct: 188 HSCSSWRNKIIVIGGEDGHDYYLSDVHILD--TDTLIWRELSTSGQLLPPRA--GHST-V 242
Query: 591 VGGTRVLVLGGHTGEEWVLNELHEL 615
G + V GG T + + N+L+ L
Sbjct: 243 SFGKNLFVFGGFTDAQNLYNDLYML 267
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 19/206 (9%)
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
W + ++G+ R + ++ A G+ L +FGG M P+ D + LD + W ++
Sbjct: 65 TWSQPALKGSPPTPRDSHTSTAVGDNLFVFGGTD-GMNPLKDLHI--LDTSLQTWVSPTI 121
Query: 352 K-SSPPGRWGHTLSSLNGSWLVVFGGCGRQG------LLNDVFVLDLDAKQPTW-IEVSG 403
+ PP R GH+ +++ G L +FGGCG+ ND+++ L+A+ W +
Sbjct: 122 RGEGPPAREGHS-AAVVGKRLFIFGGCGKSADNNNELYYNDLYI--LNAETFVWKCATTS 178
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-PPS 462
G PP PR H SC +K++V GG LSD ++LD TD +WRE+ TS P
Sbjct: 179 GTPPSPRDSH-SCSSWRNKIIVIGGEDGHDYYLSDVHILD--TDTLIWRELSTSGQLLPP 235
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHL 488
R GHS +G+ + +FGG + +L
Sbjct: 236 RAGHSTVSFGK-NLFVFGGFTDAQNL 260
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE---WRR 348
W T+RG P+R SA G RL +FGG G + ++ + +L N E W+
Sbjct: 115 TWVSPTIRGEGPPAREGHSAAVVGKRLFIFGGCGKSADNNNELYYNDLYILNAETFVWKC 174
Query: 349 VSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPP 407
+ +PP R H+ SS +V+ G G L+DV +LD D W E+S
Sbjct: 175 ATTSGTPPSPRDSHSCSSWRNKIIVIGGEDGHDYYLSDVHILDTDTL--IWRELSTSGQL 232
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHS 467
LP S + G L V GG TDA L +D Y+LD+ D +W + T+ + PS
Sbjct: 233 LPPRAGHSTVSFGKNLFVFGGFTDAQNLYNDLYMLDI--DTGVWTNVTTATNGPSA---R 287
Query: 468 LSVYG------RTKVLMF-GGLAKS 485
SV G R+ VL+F GG KS
Sbjct: 288 FSVAGDCLDPFRSGVLIFIGGCNKS 312
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 124/268 (46%), Gaps = 42/268 (15%)
Query: 307 CNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPG-RWGHTLSS 365
CN A G + +FGG G + + V D W + ++K SPP R HT ++
Sbjct: 31 CN--AVKGGRLVYVFGGYGKDNCQTNQVHVF--DTVKQTWSQPALKGSPPTPRDSHTSTA 86
Query: 366 LNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIE--VSGGAPPLPRSWHSSCIIEGSKL 423
+ G L VFGG L D+ +LD + TW+ + G PP R HS+ ++ G +L
Sbjct: 87 V-GDNLFVFGGTDGMNPLKDLHILDTSLQ--TWVSPTIRGEGPPA-REGHSAAVV-GKRL 141
Query: 424 VVSGGCTDAG-----VLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVL 477
+ GGC + + +D Y+L+ T +W+ TS +PPS R HS S + R K++
Sbjct: 142 FIFGGCGKSADNNNELYYNDLYILNAETF--VWKCATTSGTPPSPRDSHSCSSW-RNKII 198
Query: 478 MFGGLAKSGHLRLRSGESYTID---LGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVA 534
+ GG + GH + Y D L + W++L S S + PPR H
Sbjct: 199 VIGG--EDGH------DYYLSDVHILDTDTLIWREL---------STSGQLLPPRAGHST 241
Query: 535 VSMPCGRIIIFGGSIAGLHSPSQLFLLD 562
VS + +FGG + + L++LD
Sbjct: 242 VSF-GKNLFVFGGFTDAQNLYNDLYMLD 268
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
E W+ T G R + S + N++++ GGE + + D +L+ D WR
Sbjct: 168 ETFVWKCATTSGTPPSPRDSHSCSSWRNKIIVIGGEDGHDYYLSDVHILDTDTL--IWRE 225
Query: 349 VSVKSS--PPGRWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLDAKQPTWIEVSGGA 405
+S PP R GH+ S G L VFGG Q L ND+++LD+D T + +
Sbjct: 226 LSTSGQLLPP-RAGHSTVSF-GKNLFVFGGFTDAQNLYNDLYMLDIDTGVWTNVTTATNG 283
Query: 406 PPLPRSWHSSCI--IEGSKLVVSGGCTDAGVLLSDTYLL 442
P S C+ L+ GGC + L D Y L
Sbjct: 284 PSARFSVAGDCLDPFRSGVLIFIGGCNKSLEALDDMYYL 322
>gi|197257792|gb|ACH56106.1| phototropin [synthetic construct]
Length = 139
Score = 92.4 bits (228), Expect = 7e-16, Method: Composition-based stats.
Identities = 47/110 (42%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ D PD PI++ + F FTGY DE+LGRNCRFLQ P D V+
Sbjct: 15 SFVITDPSLPDHPIVFASDGFMEFTGYSVDEILGRNCRFLQ---------GPKTDRAAVA 65
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR +E G E LLN+ K G N LAP+RD+ G V G+Q+
Sbjct: 66 KIREAIENGEECTVRLLNYTKTGEEFWNMFTLAPVRDEQGIVRFFAGVQV 115
>gi|334117359|ref|ZP_08491451.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Microcoleus vaginatus FGP-2]
gi|333462179|gb|EGK90784.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Microcoleus vaginatus FGP-2]
Length = 1375
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 15/146 (10%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+ DA D PIIYVN FE TGYR DE++G+NCRFLQ D +
Sbjct: 356 IAITDATVADNPIIYVNPSFERITGYRRDELMGKNCRFLQGTDTHTP---------AAKQ 406
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI------FSEAK 170
+R +EEG E Q L NF+KDGTP + L +AP+ + +TH IG+Q SE +
Sbjct: 407 LRVAIEEGRESQVILRNFRKDGTPFWHELSIAPVYNSRRHLTHFIGVQTDITDRQRSEEE 466
Query: 171 IDLNHVSYPVFKENCNQQYDQSAQYF 196
+ LN + F N + + ++
Sbjct: 467 LFLNSQALAAFSANLKHLHRITTYHY 492
>gi|188577558|ref|YP_001914487.1| histidine kinase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188522010|gb|ACD59955.1| sensor histidine kinase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 507
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D PD PI++ N+ F TGY A+EV+G NCRFLQ P DP
Sbjct: 3 TTRMPMTVTDPHLPDNPIVFANRAFLEMTGYSAEEVIGNNCRFLQ---------GPETDP 53
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+S++R+ +E EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 54 ASISDVRQSIETRSEFATEVLNYRKDGSSFWNALFVSPVFDDHGNLVYFFGSQL 107
>gi|347835653|emb|CCD50225.1| similar to transcription factor Zn, GATA, partial sequence
[Botryotinia fuckeliana]
Length = 714
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ--RRHPLVDPVV 113
+FVV D + D PIIYV+ VFE TGY EVLGRNCRFLQ D + Q R +
Sbjct: 378 AFVVCDLRETDCPIIYVSDVFENLTGYSRHEVLGRNCRFLQSPDGKIQAGERRTATENDK 437
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPI--RDDDGTVTHIIGIQIFSEAK- 170
V E+++ ++ E Q ++N+++ G P +N L + PI DDD T++ ++G Q+ A
Sbjct: 438 VYELKKAVDNRTETQQAIINYRRGGQPFMNLLTMIPIPASDDDPTLSLVVGFQVDVVANP 497
Query: 171 IDLNHVSYPVFKENCNQ 187
++ VS ++ N Q
Sbjct: 498 TSIDGVSGGIYTMNYKQ 514
>gi|84624645|ref|YP_452017.1| histidine kinase [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|84368585|dbj|BAE69743.1| sensor histidine kinase [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 540
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D PD PI++ N+ F TGY A+EV+G NCRFLQ P DP
Sbjct: 36 TTRMPMTVTDPHLPDNPIVFANRAFLEMTGYSAEEVIGNNCRFLQ---------GPETDP 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+S++R+ +E EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 87 ASISDVRQSIETRSEFATEVLNYRKDGSSFWNALFVSPVFDDHGNLVYFFGSQL 140
>gi|253750644|gb|ACT35018.1| phytochrome 3 [Plagiogyria distinctissima]
Length = 1435
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 65/113 (57%), Gaps = 11/113 (9%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
TSFVV DA PD PII+ + F TGY EVL NCRFLQ P +P V
Sbjct: 665 TSFVVVDALKPDLPIIFASTGFFNLTGYTYREVLAGNCRFLQ---------GPDTNPADV 715
Query: 115 SEIRRCLE-EGI-EFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+ IR L +G F G LLN++KDG+ N L +API+DD GT+ IG+Q+
Sbjct: 716 ASIREALAPQGTGTFCGRLLNYRKDGSNFWNLLTIAPIKDDSGTIVKFIGVQL 768
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ D PD PII+ + F T Y ++VLG NCRFLQ RD D V
Sbjct: 937 SFVITDPRLPDNPIIFASDQFLELTEYSREDVLGENCRFLQGRD---------TDLKAVQ 987
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR ++EG + LLN+ + G P N L +RD G + + IG+Q
Sbjct: 988 LIRDAVKEGHDVTVHLLNYTRSGRPFWNLFHLQAMRDKKGNLQYFIGVQ 1036
>gi|330501334|ref|YP_004378203.1| diguanylate cyclase/phosphodiesterase [Pseudomonas mendocina NK-01]
gi|328915620|gb|AEB56451.1| diguanylate cyclase/phosphodiesterase [Pseudomonas mendocina NK-01]
Length = 1274
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Query: 48 LFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP 107
L +P +ADA PD P++Y N F TGYRADE LGRNCRFL +D P
Sbjct: 338 LAMEASPLGVTIADARQPDLPLVYCNSAFSQITGYRADEALGRNCRFLLGKDRVQLELQP 397
Query: 108 LVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFS 167
L R L +G + N++KDG P N + LAP+RD+ G ++H +G+Q
Sbjct: 398 L---------RAALRDGRSGHAVVRNYRKDGKPFWNEVVLAPMRDEQG-ISHFVGLQHDV 447
Query: 168 EAKIDL 173
+++L
Sbjct: 448 TERVEL 453
>gi|403350529|gb|EJY74730.1| Kelch repeat protein, putative [Oxytricha trifallax]
Length = 415
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 134/296 (45%), Gaps = 37/296 (12%)
Query: 274 KKLGWGRLA-RELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMD 332
KK G+ L + L + W K ++G R +A AG+R+++FGG+G Q
Sbjct: 72 KKSGYTYLNDTHVLDLNSSRWIKPKIQGTPPHPRYGHTAILAGSRIIIFGGKGGKNQAHR 131
Query: 333 DTFVLNLDAANPEWRRVSVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDL 391
D L D W + + P R+GHT + + G+ + +FGG + ND+ +LDL
Sbjct: 132 DLHAL--DPVTMTWYQGPEGAGAPLARFGHTANLVGGTKMYIFGGWNGKDYYNDLHILDL 189
Query: 392 DAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCT-----------DAGVLLSDTY 440
+ + VSG AP PR HSS +I G+ LVV GG + G ++ +Y
Sbjct: 190 EIMAWSRPNVSGPAPS-PRQGHSSILI-GNNLVVHGGFKLREDQLKNCGLNQGSAVNASY 247
Query: 441 LLD---LTTDKPMWREIPTSWSPP-SRLGHSLSVYGRTKVLMFGGLA-----KSGHLRLR 491
L D L TD W + S PP +R GH+L++ G + ++MFGG ++ H +
Sbjct: 248 LNDIRVLDTDTFTWSRLRISDEPPEARYGHTLNISG-SDIIMFGGWTVNSGNRAKHEIKK 306
Query: 492 SGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG 547
Y + E WK+ G P R H + ++ ++IFGG
Sbjct: 307 EQCDYFMIWNTETMSWKK---------GKYIGNPPTQRYGHTSTAIGP-HLLIFGG 352
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 128/280 (45%), Gaps = 44/280 (15%)
Query: 346 WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG------LLNDVFVLDLDAKQPTWI 399
W ++ PP G ++L G+ ++ FGG G LND VLDL++ + WI
Sbjct: 36 WAFPQIEGVPPSPRGGHSATLIGASILYFGGHYYGGKKSGYTYLNDTHVLDLNSSR--WI 93
Query: 400 EVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPT-S 457
+ G PP PR H+ I+ GS++++ GG D + LD T W + P +
Sbjct: 94 KPKIQGTPPHPRYGHT-AILAGSRIIIFGGKGGKNQAHRDLHALDPVT--MTWYQGPEGA 150
Query: 458 WSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTG 517
+P +R GH+ ++ G TK+ +FGG +G+ Y DL LE A++
Sbjct: 151 GAPLARFGHTANLVGGTKMYIFGGW---------NGKDYYNDL-----HILDLEIMAWS- 195
Query: 518 VGSQSAVVPPPRLDHVAVSMPCGRIIIFGG--------SIAGLHSPSQL---FLLDP--- 563
+ S P PR H ++ + +++ GG GL+ S + +L D
Sbjct: 196 RPNVSGPAPSPRQGHSSI-LIGNNLVVHGGFKLREDQLKNCGLNQGSAVNASYLNDIRVL 254
Query: 564 SEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHT 603
+ +W L + +PP+ +GH T + G+ +++ GG T
Sbjct: 255 DTDTFTWSRLRISDEPPEARYGH-TLNISGSDIIMFGGWT 293
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 76/160 (47%), Gaps = 17/160 (10%)
Query: 460 PPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGV 518
PPS R GHS ++ G + +L FGG G +SG +Y D L+ N+ +
Sbjct: 45 PPSPRGGHSATLIGAS-ILYFGGHYYGGK---KSGYTYLNDT-------HVLDLNSSRWI 93
Query: 519 GSQSAVVPP-PRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPG 577
+ PP PR H A+ + RIIIFGG + L LDP +W
Sbjct: 94 KPKIQGTPPHPRYGHTAI-LAGSRIIIFGGKGGKNQAHRDLHALDPVTM--TWYQGPEGA 150
Query: 578 QPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCL 617
P +GH+ +VGGT++ + GG G+++ N+LH L L
Sbjct: 151 GAPLARFGHTANLVGGTKMYIFGGWNGKDY-YNDLHILDL 189
>gi|448611043|ref|ZP_21661677.1| bacterio-opsin activator [Haloferax mucosum ATCC BAA-1512]
gi|445743475|gb|ELZ94956.1| bacterio-opsin activator [Haloferax mucosum ATCC BAA-1512]
Length = 659
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P +AD PD P++YVN+ FE TGY D LGRNCR+LQ P DP
Sbjct: 142 PVGITIADCSLPDRPLVYVNEAFESMTGYSEDAALGRNCRYLQ---------GPKTDPEQ 192
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ +RR ++ ELLN+++DG NR+ +AP+ DG VTH +G Q
Sbjct: 193 VTALRRAIDAEESASVELLNYREDGESFWNRVDVAPLSGPDGEVTHYVGFQ 243
>gi|403369553|gb|EJY84622.1| hypothetical protein OXYTRI_17531 [Oxytricha trifallax]
Length = 407
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 37/277 (13%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR-VSV 351
W K + G P+R S+ AG+R+++FGG+G D L D + W +
Sbjct: 116 WIKPKISGTPPPARYGHSSVLAGSRIIIFGGKGPKGAVFRDLHAL--DPVSMTWYQGPEG 173
Query: 352 KSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
+P R+ HT + ++G+ + VFGG Q NDV+VLDL+ + +G AP PR
Sbjct: 174 GGAPSARFDHTANLVSGTKMFVFGGWNGQDFYNDVYVLDLEIMAWSKPNCTGPAPS-PRK 232
Query: 412 WHSSCIIEGSKLVVSGGC------------TDAGVLLSDTYLLD---LTTDKPMWREIPT 456
H S +I G+ LVV GG G L + YL D L T+ +W +
Sbjct: 233 GHCSILI-GTNLVVHGGFQFSEDKMKKIGPNKMGSSLQECYLNDIRVLDTESFIWSRLRV 291
Query: 457 SWSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGES-----YTIDLGDEEPQWKQL 510
S SPP R GH++ + G + ++++GG K+ R + + Y + + WK+
Sbjct: 292 SGSPPEHRFGHTMDISG-SDIILYGGWTKTSGARFKHEPTEESCDYFMIWSTDTMSWKR- 349
Query: 511 ECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG 547
G P R H + S+ ++IFGG
Sbjct: 350 --------GQYIGNPPTSRFGHTSTSI-GPHLLIFGG 377
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 154/338 (45%), Gaps = 49/338 (14%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGG-----EGVNMQPMDDTFVLNLDAANPEWR 347
W + G R SA G LV+FGG + Q ++DT VL+++++ W
Sbjct: 60 WAFPQIEGVPPTPRGGHSATLTGASLVIFGGHYYVGQETGFQYLNDTHVLDVNSS--RWI 117
Query: 348 RVSVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLDLDAKQPTWIE-VSGG 404
+ + +PP R+GH+ S L GS +++FGG G +G + D+ LD + TW + GG
Sbjct: 118 KPKISGTPPPARYGHS-SVLAGSRIIIFGGKGPKGAVFRDLHALDPVSM--TWYQGPEGG 174
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP-TSWSPPSR 463
P R H++ ++ G+K+ V GG + +D Y+LDL + W + T +P R
Sbjct: 175 GAPSARFDHTANLVSGTKMFVFGGW-NGQDFYNDVYVLDL--EIMAWSKPNCTGPAPSPR 231
Query: 464 LGHSLSVYGRTKVLMFGG-------LAKSGHLRLRSG--ESYTID---LGDEEPQWKQLE 511
GH + G T +++ GG + K G ++ S E Y D L E W +L
Sbjct: 232 KGHCSILIG-TNLVVHGGFQFSEDKMKKIGPNKMGSSLQECYLNDIRVLDTESFIWSRLR 290
Query: 512 CNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG--SIAGL---HSPSQL---FLLDP 563
S P R H + + II++GG +G H P++ + +
Sbjct: 291 V---------SGSPPEHRFGHT-MDISGSDIILYGGWTKTSGARFKHEPTEESCDYFMIW 340
Query: 564 SEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 601
S + SW+ G PP +GH++ + G +L+ GG
Sbjct: 341 STDTMSWKRGQYIGNPPTSRFGHTSTSI-GPHLLIFGG 377
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 51/284 (17%)
Query: 346 WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG------LLNDVFVLDLDAKQPTWI 399
W ++ PP G ++L G+ LV+FGG G LND VLD+++ + WI
Sbjct: 60 WAFPQIEGVPPTPRGGHSATLTGASLVIFGGHYYVGQETGFQYLNDTHVLDVNSSR--WI 117
Query: 400 EVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSW 458
+ G PP R HSS ++ GS++++ GG G + D + LD + W + P
Sbjct: 118 KPKISGTPPPARYGHSS-VLAGSRIIIFGGKGPKGAVFRDLHALDPVS--MTWYQGPEGG 174
Query: 459 SPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTG 517
PS R H+ ++ TK+ +FGG + Y +DL E W + C
Sbjct: 175 GAPSARFDHTANLVSGTKMFVFGGWNGQDFYN----DVYVLDL--EIMAWSKPNC----- 223
Query: 518 VGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPS-------- 569
+ P PR H ++ + +++ GG S ++ + P++ S
Sbjct: 224 ----TGPAPSPRKGHCSILIGT-NLVVHGGF---QFSEDKMKKIGPNKMGSSLQECYLND 275
Query: 570 ----------WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHT 603
W L V G PP+ +GH T + G+ +++ GG T
Sbjct: 276 IRVLDTESFIWSRLRVSGSPPEHRFGH-TMDISGSDIILYGGWT 318
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Query: 460 PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVG 519
P R GHS ++ G + V+ FGG G +G Y D L+ N+ +
Sbjct: 70 PTPRGGHSATLTGASLVI-FGGHYYVGQ---ETGFQYLNDT-------HVLDVNSSRWIK 118
Query: 520 SQSAVVPPP-RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ 578
+ + PPP R H +V + RIIIFGG L LDP +W G
Sbjct: 119 PKISGTPPPARYGHSSV-LAGSRIIIFGGKGPKGAVFRDLHALDPVSM--TWYQGPEGGG 175
Query: 579 PPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCL 617
P + H+ +V GT++ V GG G+++ N+++ L L
Sbjct: 176 APSARFDHTANLVSGTKMFVFGGWNGQDF-YNDVYVLDL 213
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFG------GEGVNMQPMDDT--FVLNLD 340
E+ W + V G+ R + +G+ ++L+G G +P +++ + +
Sbjct: 282 ESFIWSRLRVSGSPPEHRFGHTMDISGSDIILYGGWTKTSGARFKHEPTEESCDYFMIWS 341
Query: 341 AANPEWRRVSVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVL 389
W+R +PP R+GHT +S+ G L++FGG N++ VL
Sbjct: 342 TDTMSWKRGQYIGNPPTSRFGHTSTSI-GPHLLIFGGWEYTKAQNEIIVL 390
>gi|326802470|ref|YP_004320289.1| PAS/PAC sensor signal transduction histidine kinase
[Sphingobacterium sp. 21]
gi|326553234|gb|ADZ81619.1| PAS/PAC sensor signal transduction histidine kinase
[Sphingobacterium sp. 21]
Length = 520
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
V+ D PD+PI+Y NK FE TGY +EV+G NCRFLQ D +++ I
Sbjct: 35 VITDCSQPDYPIVYCNKAFEELTGYSRNEVIGHNCRFLQGNDDNEEQKKV---------I 85
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ L G + E+ N+KKDG+ N+LRL PIRD++ VT+ IG+Q
Sbjct: 86 KTALHLGQPCEIEIKNYKKDGSLFWNQLRLQPIRDEENNVTYYIGVQ 132
>gi|448620191|ref|ZP_21667539.1| HTR-like protein [Haloferax denitrificans ATCC 35960]
gi|445756979|gb|EMA08335.1| HTR-like protein [Haloferax denitrificans ATCC 35960]
Length = 639
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 38 DTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQY 97
+T LS++ + P V+ D D PI+Y N+ F TGY DE LGRNCRFLQ
Sbjct: 153 ETRLSVRERAM--DEAPVGIVLTDPHAADNPIVYANEQFTELTGYGRDEALGRNCRFLQ- 209
Query: 98 RDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
D ++E+R +E+ ELLN++KDGT NR+R+API DDDG +
Sbjct: 210 --------GEATDEASIAELREAVEDREPVTTELLNYRKDGTEFWNRVRVAPIFDDDGGI 261
Query: 158 THIIGIQ 164
+G Q
Sbjct: 262 DFFVGFQ 268
>gi|381170919|ref|ZP_09880071.1| Histidine kinase [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|380688642|emb|CCG36558.1| Histidine kinase [Xanthomonas citri pv. mangiferaeindicae LMG 941]
Length = 502
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V D PD PI++ N+ F TGY ADEV+G NCRFLQ P DP +S+
Sbjct: 3 MTVTDPHLPDNPIVFANRAFLEMTGYAADEVIGNNCRFLQ---------GPETDPASISD 53
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+R +E EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 54 VRESIESRREFATEVLNYRKDGSSFWNALFISPVFDDKGNLVYFFGSQL 102
>gi|146185369|ref|XP_001031655.2| Kelch motif family protein [Tetrahymena thermophila]
gi|146142715|gb|EAR83992.2| Kelch motif family protein [Tetrahymena thermophila SB210]
Length = 427
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 140/288 (48%), Gaps = 49/288 (17%)
Query: 345 EWRRVSVKSSPP-GRWGHTLSSLNGSWLVVFGG---CGRQG---LLNDVFVLDLDAKQPT 397
+W + ++ PP R GH+ ++L+G+ +V+FGG G+Q LND ++LD+++ +
Sbjct: 82 QWAQPLIEGVPPCPRGGHS-ATLSGATIVIFGGHYYAGKQKGYVYLNDTYILDVNSNRWH 140
Query: 398 WIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPT- 456
++S G PP PR H S I+ GS++++ GG + G + D + LD T W + P
Sbjct: 141 KPKIS-GTPPAPRYNH-SAILAGSRIIIFGGKGEKGKVYRDLHALDPVTT--TWYQGPEG 196
Query: 457 SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFT 516
S SP +R GHS ++ G +K+L+FGG S + Y +D LE A+T
Sbjct: 197 SGSPSARFGHSANLVGGSKMLIFGGWNGSDFFN----DLYLLD----------LEVMAWT 242
Query: 517 GVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG--------SIAGLHSPSQL---FLLD--- 562
S + P PR H A+ + +II GG + AG +QL +L D
Sbjct: 243 QPPS-TGPAPSPRQGHTAIQV-GNNLIIQGGFHFDDEKQNQAGFRQGTQLRQCYLNDLRI 300
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLN 610
+ W L V G PP +GH T + G ++ GG W LN
Sbjct: 301 LDTDNFIWARLRVSGTPPLPRYGH-TSNISGPDIIFFGG-----WSLN 342
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 123/278 (44%), Gaps = 39/278 (14%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W K + G R N SA AG+R+++FGG+G + D L D W +
Sbjct: 139 WHKPKISGTPPAPRYNHSAILAGSRIIIFGGKGEKGKVYRDLHAL--DPVTTTWYQGPEG 196
Query: 353 S-SPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIE-VSGGAPPLPR 410
S SP R+GH+ + + GS +++FGG ND+++LDL+ W + S G P PR
Sbjct: 197 SGSPSARFGHSANLVGGSKMLIFGGWNGSDFFNDLYLLDLEVM--AWTQPPSTGPAPSPR 254
Query: 411 SWHSSCIIEGSKLVVSGGCT-----------DAGVLLSDTYLLD---LTTDKPMWREIPT 456
H++ + G+ L++ GG G L YL D L TD +W +
Sbjct: 255 QGHTAIQV-GNNLIIQGGFHFDDEKQNQAGFRQGTQLRQCYLNDLRILDTDNFIWARLRV 313
Query: 457 SWSPP-SRLGHSLSVYGRTKVLMFGGLAKSGHLR------LRSGESYTIDLGDEEPQWKQ 509
S +PP R GH+ ++ G ++ FGG + + R + Y + L E QW++
Sbjct: 314 SGTPPLPRYGHTSNISG-PDIIFFGGWSLNSGARGEQNFIPQDDIDYFLVLNTESMQWEK 372
Query: 510 LECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG 547
G P R H A S+ I+IFGG
Sbjct: 373 ---------GKFEGTPPLNRYGHTASSI-GPHILIFGG 400
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 149/337 (44%), Gaps = 47/337 (13%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQP-----MDDTFVLNLDAANPEWR 347
W + + G R SA +G +V+FGG + ++DT++L++++ W
Sbjct: 83 WAQPLIEGVPPCPRGGHSATLSGATIVIFGGHYYAGKQKGYVYLNDTYILDVNSN--RWH 140
Query: 348 RVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLDLDAKQPTWIE-VSGG 404
+ + +PP R+ H+ + L GS +++FGG G +G + D+ LD TW + G
Sbjct: 141 KPKISGTPPAPRYNHS-AILAGSRIIIFGGKGEKGKVYRDLHA--LDPVTTTWYQGPEGS 197
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-R 463
P R HS+ ++ GSK+++ GG + +D YLLDL W + P++ PS R
Sbjct: 198 GSPSARFGHSANLVGGSKMLIFGGW-NGSDFFNDLYLLDLEV--MAWTQPPSTGPAPSPR 254
Query: 464 LGHSLSVYGRTKVLMFGGL----AKSGHLRLRSG----ESYTIDLGDEEPQWKQLECNAF 515
GH+ G ++ GG K R G + Y DL + L+ + F
Sbjct: 255 QGHTAIQVGNNLIIQ-GGFHFDDEKQNQAGFRQGTQLRQCYLNDL-------RILDTDNF 306
Query: 516 TGVGSQSAVVPP-PRLDHVA-VSMPCGRIIIFGG-SIAGLHSPSQLFL--------LDPS 564
+ + PP PR H + +S P II FGG S+ Q F+ L +
Sbjct: 307 IWARLRVSGTPPLPRYGHTSNISGP--DIIFFGGWSLNSGARGEQNFIPQDDIDYFLVLN 364
Query: 565 EEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 601
E W G PP +GH+ + G +L+ GG
Sbjct: 365 TESMQWEKGKFEGTPPLNRYGHTASSI-GPHILIFGG 400
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 460 PPSRLGHSLSVYGRTKVLMFGGLAKSGHLR--LRSGESYTIDLGDEEPQWKQLECNAFTG 517
P R GHS ++ G T +++FGG +G + + ++Y +D+ +W + +
Sbjct: 93 PCPRGGHSATLSGAT-IVIFGGHYYAGKQKGYVYLNDTYILDVNSN--RWHKPKI----- 144
Query: 518 VGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPG 577
S P PR +H A+ + RIIIFGG L LDP +W
Sbjct: 145 ----SGTPPAPRYNHSAI-LAGSRIIIFGGKGEKGKVYRDLHALDPVTT--TWYQGPEGS 197
Query: 578 QPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCL 617
P +GHS +VGG+++L+ GG G ++ N+L+ L L
Sbjct: 198 GSPSARFGHSANLVGGSKMLIFGGWNGSDF-FNDLYLLDL 236
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 37/187 (19%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGG--------------EGVNMQP 330
L LE + W + G R +A GN L++ GG +G ++
Sbjct: 233 LLDLEVMAWTQPPSTGPAPSPRQGHTAIQVGNNLIIQGGFHFDDEKQNQAGFRQGTQLRQ 292
Query: 331 --MDDTFVLNLDAANPEWRRVSVKSSPP-GRWGHTLSSLNGSWLVVFGG----CGRQGLL 383
++D +L+ D N W R+ V +PP R+GHT S+++G ++ FGG G +G
Sbjct: 293 CYLNDLRILDTD--NFIWARLRVSGTPPLPRYGHT-SNISGPDIIFFGGWSLNSGARGEQ 349
Query: 384 NDV------FVLDLDAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGG-----CTD 431
N + + L L+ + W + G PPL R H++ I G +++ GG T+
Sbjct: 350 NFIPQDDIDYFLVLNTESMQWEKGKFEGTPPLNRYGHTASSI-GPHILIFGGWEFNRATN 408
Query: 432 AGVLLSD 438
V+L D
Sbjct: 409 EVVVLRD 415
>gi|224029539|gb|ACN33845.1| unknown [Zea mays]
Length = 620
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 146/332 (43%), Gaps = 29/332 (8%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W V G P R SAC + +FGG + D VL L+ W V+
Sbjct: 9 WLYPKVVGFNPPERWGHSACFFEGFVYVFGGCCGGLHFGD---VLKLNVETMAWSLVATT 65
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSW 412
PG ++L G ++VFGG +ND+ VL L + T + G PP PR
Sbjct: 66 GQCPGTRDSHGAALVGHRMLVFGGTNGGRKVNDLHVLGLRTGEWTRPQCKGAPPPSPRES 125
Query: 413 HSSCIIEGSKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
H+ ++ G +LVV GG + G L D ++LD+ T E+ +P R HS
Sbjct: 126 HTVTVVGGDRLVVFGGSGEGEGNYLCDVHVLDVPTMTWSSPEVRGGHAPAPRDSHSAVAV 185
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESY--TIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPR 529
GR ++ +FGG G+ Y +D+ D + + + F G+ V R
Sbjct: 186 GR-RLFVFGG---------DCGDRYHGDVDVLDVD----TMAWSMFPVKGASPGV----R 227
Query: 530 LDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTC 589
H A+S+ ++ I GG + H S +++LD + SW L V GQ P+ + H T
Sbjct: 228 AGHAAMSV-GSKVYIIGG-VGDKHYYSDVWVLDVTNR--SWSQLEVCGQRPQGRFSH-TA 282
Query: 590 VVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
V T + + GG +E LNEL L L S+
Sbjct: 283 VAMNTDIAIYGGCGEDERPLNELLILQLGSEH 314
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 123/290 (42%), Gaps = 29/290 (10%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
+E + W G +R + A G+R+++FGG + ++D VL L EW
Sbjct: 53 NVETMAWSLVATTGQCPGTRDSHGAALVGHRMLVFGGTNGGRK-VNDLHVLGLRTG--EW 109
Query: 347 RRVSVKSSPP--GRWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQPTWIEVS 402
R K +PP R HT++ + G LVVFGG G L DV VLD+ + EV
Sbjct: 110 TRPQCKGAPPPSPRESHTVTVVGGDRLVVFGGSGEGEGNYLCDVHVLDVPTMTWSSPEVR 169
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS-WSPP 461
GG P PR HS+ + V G C D D +LD+ D W P SP
Sbjct: 170 GGHAPAPRDSHSAVAVGRRLFVFGGDCGDR--YHGDVDVLDV--DTMAWSMFPVKGASPG 225
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
R GH+ G +KV + GG+ + + + +D+ + W QLE
Sbjct: 226 VRAGHAAMSVG-SKVYIIGGVGDKHYY----SDVWVLDVTNRS--WSQLEV--------- 269
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
P R H AV+M I I+GG ++L +L E P+ R
Sbjct: 270 CGQRPQGRFSHTAVAMNT-DIAIYGGCGEDERPLNELLILQLGSEHPNGR 318
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++ + W F V+GA R +A + G+++ + GG G + D +V LD N
Sbjct: 205 DVLDVDTMAWSMFPVKGASPGVRAGHAAMSVGSKVYIIGGVG-DKHYYSDVWV--LDVTN 261
Query: 344 PEWRRVSV-KSSPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ V P GR+ HT ++N + + ++GGCG + LN++ +L L ++ P
Sbjct: 262 RSWSQLEVCGQRPQGRFSHTAVAMN-TDIAIYGGCGEDERPLNELLILQLGSEHPN 316
>gi|224000393|ref|XP_002289869.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975077|gb|EED93406.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 103
Score = 91.7 bits (226), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/108 (43%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
FVV D PD PI+Y + F TGY D+VLGRNCRFLQ P DP V +
Sbjct: 1 FVVTDPSLPDNPIVYATQGFLNLTGYTLDQVLGRNCRFLQ---------GPETDPKAVEK 51
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR +EEG + LLN++ DGT N+ +A +RD G +T+ +G+Q
Sbjct: 52 IRNAIEEGSDMSVCLLNYRVDGTTFWNQFFIAALRDAGGNITNYVGVQ 99
>gi|255547157|ref|XP_002514636.1| kelch repeat protein, putative [Ricinus communis]
gi|223546240|gb|EEF47742.1| kelch repeat protein, putative [Ricinus communis]
Length = 556
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 127/271 (46%), Gaps = 26/271 (9%)
Query: 350 SVKSSPPGRWGHTLSSLNGS-WLVVFGGCGRQGL-LNDVFVLDLDAKQPTWIE-VSGGAP 406
++ + P RWGHT +S+ G +L VFGG G+ N V V D + TW + V G P
Sbjct: 14 NINNGPGKRWGHTCNSVKGGRFLYVFGGYGKDNCQTNQVHVFDTATQ--TWSQPVIKGTP 71
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGH 466
P PR H SC G L V GG TD L D ++LD + + + P +R GH
Sbjct: 72 PTPRDSH-SCTTVGDSLYVFGG-TDGMNPLKDLHILDTLSHTWIAPAV-RGEGPEAREGH 128
Query: 467 SLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVP 526
S ++ G+ ++ +FGG KS + + E Y DL L F + ++ P
Sbjct: 129 SAALVGK-RLFIFGGCGKSSN---NNDEVYFNDL-------YILNTETFVWKKAVTSGTP 177
Query: 527 PPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ--PPKFAW 584
P D S +II+ GG + S + +LD E W+ LN GQ PP+
Sbjct: 178 PSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILD--AETLVWKELNATGQKLPPRA-- 233
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWVLNELHEL 615
GHST V G + V GG T + + ++L+ L
Sbjct: 234 GHST-VSFGKNLFVFGGFTDAQNLYDDLYML 263
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 10/186 (5%)
Query: 283 RELTTLEAV--CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLD 340
++L L+ + W VRG +R SA G RL +FGG G + D+ + +L
Sbjct: 100 KDLHILDTLSHTWIAPAVRGEGPEAREGHSAALVGKRLFIFGGCGKSSNNNDEVYFNDLY 159
Query: 341 AANPE---WRRVSVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQP 396
N E W++ +PP R HT SS +V+ G G L+DV +LD A+
Sbjct: 160 ILNTETFVWKKAVTSGTPPSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILD--AETL 217
Query: 397 TWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPT 456
W E++ LP S + G L V GG TDA L D Y+LD+ D +W +I T
Sbjct: 218 VWKELNATGQKLPPRAGHSTVSFGKNLFVFGGFTDAQNLYDDLYMLDV--DTGVWTKIMT 275
Query: 457 SWSPPS 462
+ PS
Sbjct: 276 AGIGPS 281
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W + ++G R + S G+ L +FGG M P+ D +L D + W +V+
Sbjct: 62 WSQPVIKGTPPTPRDSHSCTTVGDSLYVFGGTD-GMNPLKDLHIL--DTLSHTWIAPAVR 118
Query: 353 SS-PPGRWGHTLSSLNGSWLVVFGGCGRQG------LLNDVFVLDLDAKQPTWIE-VSGG 404
P R GH+ ++L G L +FGGCG+ ND+++L+ + W + V+ G
Sbjct: 119 GEGPEAREGHS-AALVGKRLFIFGGCGKSSNNNDEVYFNDLYILNTETF--VWKKAVTSG 175
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI-PTSWSPPSR 463
PP R H +C +K++V GG LSD ++LD T +W+E+ T P R
Sbjct: 176 TPPSARDSH-TCSSWKNKIIVIGGEDGHDYYLSDVHILDAET--LVWKELNATGQKLPPR 232
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHL 488
GHS +G+ + +FGG + +L
Sbjct: 233 AGHSTVSFGKN-LFVFGGFTDAQNL 256
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
E W+K G +R + + + N++++ GGE + + D +L DA W+
Sbjct: 164 ETFVWKKAVTSGTPPSARDSHTCSSWKNKIIVIGGEDGHDYYLSDVHIL--DAETLVWKE 221
Query: 349 VSVKSSP-PGRWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
++ P R GH+ S G L VFGG Q L +D+++LD+D T I +G P
Sbjct: 222 LNATGQKLPPRAGHSTVSF-GKNLFVFGGFTDAQNLYDDLYMLDVDTGVWTKIMTAGIGP 280
Query: 407 PLPRSWHSSCIIE--GSKLVVSGGCTDAGVLLSDTYLL 442
S C+ G LV GGC + L D Y L
Sbjct: 281 SARFSVAGDCLDPQIGGVLVFIGGCNKSLEALDDMYYL 318
>gi|357406211|ref|YP_004918135.1| Multi-sensor hybrid histidine kinase (modular protein)
[Methylomicrobium alcaliphilum 20Z]
gi|351718876|emb|CCE24550.1| Multi-sensor hybrid histidine kinase (modular protein)
[Methylomicrobium alcaliphilum 20Z]
Length = 1418
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 66/112 (58%), Gaps = 9/112 (8%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ + V+ADA D P+I+ NK FE TGY +E+LG+NCRFL D R P +D
Sbjct: 527 ASTSGIVIADANQHDMPLIFTNKAFERITGYPREEILGKNCRFLNNND----RHQPGLD- 581
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
+R L +G + + L N++KDG+ N LR+AP+ D+ G +TH IGI
Sbjct: 582 ----HVRSALSKGEKVETVLRNYRKDGSMFWNELRIAPVHDEQGNLTHFIGI 629
>gi|403357999|gb|EJY78634.1| hypothetical protein OXYTRI_24204 [Oxytricha trifallax]
Length = 407
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 37/277 (13%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR-VSV 351
W K + G P+R S+ AG+R+++FGG+G D L D + W +
Sbjct: 116 WIKPKISGTPPPARYGHSSVLAGSRIIIFGGKGPKGAVFRDLHAL--DPVSMTWYQGPEG 173
Query: 352 KSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
+P R+ HT + ++G+ + VFGG Q NDV+VLDL+ + +G AP PR
Sbjct: 174 GGAPSARFDHTANLVSGTKMFVFGGWNGQDFYNDVYVLDLEIMAWSKPNCTGPAPS-PRK 232
Query: 412 WHSSCIIEGSKLVVSGGC------------TDAGVLLSDTYLLD---LTTDKPMWREIPT 456
H S +I G+ LVV GG G L + YL D L T+ +W +
Sbjct: 233 GHCSILI-GTNLVVHGGFQFSEDKMKKIGPNKMGSSLQECYLNDIRVLDTESFIWSRLRV 291
Query: 457 SWSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGES-----YTIDLGDEEPQWKQL 510
S SPP R GH++ + G + ++++GG K+ R + + Y + + WK+
Sbjct: 292 SGSPPEHRFGHTMDISG-SDIILYGGWTKTSGARFKHEPTEESCDYFMIWSTDTMSWKR- 349
Query: 511 ECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG 547
G P R H + S+ ++IFGG
Sbjct: 350 --------GQYIGNPPTSRFGHTSTSI-GPHLLIFGG 377
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 154/338 (45%), Gaps = 49/338 (14%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGG-----EGVNMQPMDDTFVLNLDAANPEWR 347
W + G R SA G LV+FGG + Q ++DT VL+++++ W
Sbjct: 60 WAFPQIEGVPPTPRGGHSATLTGASLVIFGGHYYVGQETGFQYLNDTHVLDVNSS--RWI 117
Query: 348 RVSVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLDLDAKQPTWIE-VSGG 404
+ + +PP R+GH+ S L GS +++FGG G +G + D+ LD + TW + GG
Sbjct: 118 KPKISGTPPPARYGHS-SVLAGSRIIIFGGKGPKGAVFRDLHALDPVSM--TWYQGPEGG 174
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP-TSWSPPSR 463
P R H++ ++ G+K+ V GG + +D Y+LDL + W + T +P R
Sbjct: 175 GAPSARFDHTANLVSGTKMFVFGGW-NGQDFYNDVYVLDL--EIMAWSKPNCTGPAPSPR 231
Query: 464 LGHSLSVYGRTKVLMFGG-------LAKSGHLRLRSG--ESYTID---LGDEEPQWKQLE 511
GH + G T +++ GG + K G ++ S E Y D L E W +L
Sbjct: 232 KGHCSILIG-TNLVVHGGFQFSEDKMKKIGPNKMGSSLQECYLNDIRVLDTESFIWSRLR 290
Query: 512 CNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG--SIAGL---HSPSQL---FLLDP 563
S P R H + + II++GG +G H P++ + +
Sbjct: 291 V---------SGSPPEHRFGHT-MDISGSDIILYGGWTKTSGARFKHEPTEESCDYFMIW 340
Query: 564 SEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 601
S + SW+ G PP +GH++ + G +L+ GG
Sbjct: 341 STDTMSWKRGQYIGNPPTSRFGHTSTSI-GPHLLIFGG 377
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 51/284 (17%)
Query: 346 WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG------LLNDVFVLDLDAKQPTWI 399
W ++ PP G ++L G+ LV+FGG G LND VLD+++ + WI
Sbjct: 60 WAFPQIEGVPPTPRGGHSATLTGASLVIFGGHYYVGQETGFQYLNDTHVLDVNSSR--WI 117
Query: 400 EVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSW 458
+ G PP R HSS ++ GS++++ GG G + D + LD + W + P
Sbjct: 118 KPKISGTPPPARYGHSS-VLAGSRIIIFGGKGPKGAVFRDLHALDPVS--MTWYQGPEGG 174
Query: 459 SPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTG 517
PS R H+ ++ TK+ +FGG + Y +DL E W + C
Sbjct: 175 GAPSARFDHTANLVSGTKMFVFGGWNGQDFYN----DVYVLDL--EIMAWSKPNC----- 223
Query: 518 VGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPS-------- 569
+ P PR H ++ + +++ GG S ++ + P++ S
Sbjct: 224 ----TGPAPSPRKGHCSILIGT-NLVVHGGF---QFSEDKMKKIGPNKMGSSLQECYLND 275
Query: 570 ----------WRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHT 603
W L V G PP+ +GH T + G+ +++ GG T
Sbjct: 276 IRVLDTESFIWSRLRVSGSPPEHRFGH-TMDISGSDIILYGGWT 318
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Query: 460 PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVG 519
P R GHS ++ G + V+ FGG G +G Y D L+ N+ +
Sbjct: 70 PTPRGGHSATLTGASLVI-FGGHYYVGQ---ETGFQYLNDT-------HVLDVNSSRWIK 118
Query: 520 SQSAVVPPP-RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ 578
+ + PPP R H +V + RIIIFGG L LDP +W G
Sbjct: 119 PKISGTPPPARYGHSSV-LAGSRIIIFGGKGPKGAVFRDLHALDPVSM--TWYQGPEGGG 175
Query: 579 PPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCL 617
P + H+ +V GT++ V GG G+++ N+++ L L
Sbjct: 176 APSARFDHTANLVSGTKMFVFGGWNGQDF-YNDVYVLDL 213
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFG------GEGVNMQPMDDT--FVLNLD 340
E+ W + V G+ R + +G+ ++L+G G +P +++ + +
Sbjct: 282 ESFIWSRLRVSGSPPEHRFGHTMDISGSDIILYGGWTKTSGARFKHEPTEESCDYFMIWS 341
Query: 341 AANPEWRRVSVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVL 389
W+R +PP R+GHT +S+ G L++FGG N++ VL
Sbjct: 342 TDTMSWKRGQYIGNPPTSRFGHTSTSI-GPHLLIFGGWEYTKAQNEIIVL 390
>gi|416407631|ref|ZP_11688282.1| PAS containing protein [Crocosphaera watsonii WH 0003]
gi|357260847|gb|EHJ10190.1| PAS containing protein [Crocosphaera watsonii WH 0003]
Length = 483
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 40 ELSLKPGLLFYPTTPT--SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQY 97
++ L+ LL+ T S V+ DA D+PIIYVN FEI TGY EV G+NCRFLQ
Sbjct: 158 QIPLESHLLYQAIAATNNSIVITDATASDYPIIYVNPGFEIMTGYSLQEVTGKNCRFLQG 217
Query: 98 RDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
D + + +IR CL++G L N++KDG+ N + L+PI+D+ G +
Sbjct: 218 SDDQQPE---------LEQIRDCLQKGESCHVTLRNYRKDGSLFWNEMSLSPIKDESGNI 268
Query: 158 THIIGIQ 164
+ +G+Q
Sbjct: 269 LYYLGVQ 275
>gi|145355076|ref|XP_001421797.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582035|gb|ABP00091.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 734
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ D PD PI++ + F FTGY DE+LGRNCRFLQ P D V+
Sbjct: 212 SFVITDPSLPDHPIVFASDGFMDFTGYSVDEILGRNCRFLQ---------GPKTDRAAVA 262
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR+ +E G E LLN+ K G N LAP+RDD G V G+Q+
Sbjct: 263 KIRQAIELGEECTVRLLNYTKSGKQFWNMFTLAPVRDDQGIVRFFAGVQV 312
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 84/182 (46%), Gaps = 28/182 (15%)
Query: 27 SFEGGGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADE 86
S EGG D +++ + +F V DA D PI+Y + F T Y ADE
Sbjct: 6 SIEGGAHAPSLDAKVARA-----FAAFDHTFTVCDATREDCPIVYASDGFLRMTQYGADE 60
Query: 87 VLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLR 146
V+G NCRFLQ D V E+R ++ G + LLN+KKDGTP N L
Sbjct: 61 VIGHNCRFLQ---------GEATDGNDVRELREAIKRGDRWSVRLLNYKKDGTPFWNYLV 111
Query: 147 LAPIRDDDGTVTHIIGIQI-FSEAK--------IDLNHVSYPVFKENCNQQYDQSAQYFS 197
+AP++ DGTV IG+Q+ +E K ID + PV +YD A S
Sbjct: 112 VAPVKLADGTVAKYIGVQVDVTEVKDATTGERGIDFDEEGMPV-----PSRYDARAAAVS 166
Query: 198 GG 199
G
Sbjct: 167 LG 168
>gi|310799521|gb|EFQ34414.1| vivid PAS protein VVD [Glomerella graminicola M1.001]
Length = 192
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR----DPRAQRRHPLVD 110
+ ++ D PD PI+Y ++ F I TGY E+LG+NCRFLQ ++ R+H VD
Sbjct: 76 VALLLCDLQQPDTPIVYASEHFSILTGYTNREILGKNCRFLQAPGGKVSKKSARKH--VD 133
Query: 111 PVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
V +R+ +E E Q E+LNF+KDGTP VN L + P+R D + +G Q+ E
Sbjct: 134 KETVKSMRKAVEMNDEVQLEVLNFRKDGTPFVNLLTMIPVRWDSQDFRYSVGFQVERE 191
>gi|336451390|ref|ZP_08621828.1| diguanylate cyclase (GGDEF) domain-containing protein [Idiomarina
sp. A28L]
gi|336281761|gb|EGN75033.1| diguanylate cyclase (GGDEF) domain-containing protein [Idiomarina
sp. A28L]
Length = 880
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 13/110 (11%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR--DPRAQRRHPLVDPVVV 114
V+ADA +P++YVN F+ TGY A E+LG NC+ LQ D RA +
Sbjct: 339 IVIADARQQGYPLVYVNPAFQRITGYSAAEMLGNNCKVLQGEGTDSRA-----------I 387
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+IR CL++ + Q + N++KDGTP N L +AP+RD +G +TH IGIQ
Sbjct: 388 EQIRNCLKKERDVQTIIRNYRKDGTPFWNDLYIAPVRDKNGVLTHYIGIQ 437
>gi|67925445|ref|ZP_00518788.1| PAS [Crocosphaera watsonii WH 8501]
gi|67852704|gb|EAM48120.1| PAS [Crocosphaera watsonii WH 8501]
Length = 297
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 40 ELSLKPGLLFYPTTPT--SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQY 97
++ L+ LL+ T S V+ DA D+PIIYVN FEI TGY EV G+NCRFLQ
Sbjct: 158 QIPLESHLLYQAIAATNNSIVITDATASDYPIIYVNPGFEIMTGYSLQEVTGKNCRFLQG 217
Query: 98 RDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
D + + +IR CL++G L N++KDG+ N + L+PI+D+ G +
Sbjct: 218 SDDQQPE---------LEQIRDCLQKGESCHVTLRNYRKDGSLFWNEMSLSPIKDESGNI 268
Query: 158 THIIGIQ 164
+ +G+Q
Sbjct: 269 LYYLGVQ 275
>gi|428304763|ref|YP_007141588.1| multi-sensor signal transduction histidine kinase [Crinalium
epipsammum PCC 9333]
gi|428246298|gb|AFZ12078.1| multi-sensor signal transduction histidine kinase [Crinalium
epipsammum PCC 9333]
Length = 811
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T + DA P PIIY N FE TG+ +EVLGRNC+FLQ +D D
Sbjct: 33 ATSCGVTITDATQPHNPIIYCNPAFESITGFPPEEVLGRNCKFLQGKD---------TDL 83
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
VV +IR+ L E Q L N++K+GTP N L+++P+ D +G +T+ IG+Q ++I
Sbjct: 84 AVVEQIRQALRTKQECQVVLKNYRKNGTPFWNELKISPVCDRNGNLTNFIGVQTDITSRI 143
Query: 172 D 172
+
Sbjct: 144 E 144
>gi|330843205|ref|XP_003293551.1| hypothetical protein DICPUDRAFT_158419 [Dictyostelium purpureum]
gi|325076114|gb|EGC29929.1| hypothetical protein DICPUDRAFT_158419 [Dictyostelium purpureum]
Length = 503
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 145/324 (44%), Gaps = 42/324 (12%)
Query: 293 WRKFTVRGAVEPS-RCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
WR + + EPS RC + + G+ L +FGG + Q ++D F N++ EW + V
Sbjct: 2 WR--VEQSSNEPSPRCAHQSESIGDHLYVFGGWNDDNQMLNDIFKFNVNTW--EWEEIKV 57
Query: 352 --KSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLP 409
S R GH+L+S N L+VFGG G LND+ + D Q T + +G P
Sbjct: 58 IDNSFITPRNGHSLNSYNRK-LIVFGGGSFSGFLNDINIFDPIKLQWTLVNTTGDIPS-G 115
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-------PPS 462
RS HSS +I + GG D L +D + LDL T + W++I + S P +
Sbjct: 116 RSKHSSTLIFNKLYIFGGG--DGIRLYNDMFCLDLETFE--WKKIIYNNSSGEAIQPPSA 171
Query: 463 RLGHSLSVYGRTK-VLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
R GH++ G K +++F G A + R + Y ++ E +W + +
Sbjct: 172 RWGHTMVSLGDNKHMVLFAGHAGTK----RINDLYLFNI--ESNEWLTVNFDK------D 219
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVP-GQPP 580
S P PR H + M ++IFGG H + L+ LD WR + P
Sbjct: 220 SDATPLPRAGHSTL-MVDHHMVIFGGGDG--HIINDLYGLDTK----CWRWWKIKINNTP 272
Query: 581 KFAWGHSTCVVGGTRVLVLGGHTG 604
HS ++ ++L+ GG G
Sbjct: 273 DARCAHSATII-KNKLLIFGGGNG 295
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 25/275 (9%)
Query: 346 WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLDLDAKQPTWIEVSGG 404
WR + P R H S+ G L VFGG +LND+F +++ + I+V
Sbjct: 2 WRVEQSSNEPSPRCAHQSESI-GDHLYVFGGWNDDNQMLNDIFKFNVNTWEWEEIKVIDN 60
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
+ PR+ HS KL+V GG + +G L+D + D K W + T+ PS
Sbjct: 61 SFITPRNGHSLNSY-NRKLIVFGGGSFSG-FLNDINIFDPI--KLQWTLVNTTGDIPSGR 116
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
S K+ +FGG +RL + + + +DL E +WK++ N +G A+
Sbjct: 117 SKHSSTLIFNKLYIFGG---GDGIRLYN-DMFCLDL--ETFEWKKIIYNNSSG----EAI 166
Query: 525 VPP-PRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQP---P 580
PP R H VS+ + ++ AG + L+L + E W +N P
Sbjct: 167 QPPSARWGHTMVSLGDNKHMVLFAGHAGTKRINDLYLFNI--ESNEWLTVNFDKDSDATP 224
Query: 581 KFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHEL 615
GHST +V +++ GG G+ ++N+L+ L
Sbjct: 225 LPRAGHSTLMV-DHHMVIFGG--GDGHIINDLYGL 256
>gi|219127104|ref|XP_002183783.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405020|gb|EEC44965.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 103
Score = 91.3 bits (225), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
FVV D PD PI+Y ++ F TGY D++LGRNCRFLQ P DP V
Sbjct: 1 FVVTDPSLPDNPIVYASQGFLNLTGYSLDQILGRNCRFLQ---------GPETDPKAVER 51
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR+ +E+G + LLN++ DGT N+ +A +RD G VT+ +G+Q
Sbjct: 52 IRKAIEQGNDMSVCLLNYRVDGTTFWNQFFIAALRDAGGNVTNFVGVQ 99
>gi|296131526|ref|YP_003638776.1| putative PAS/PAC sensor protein [Cellulomonas flavigena DSM 20109]
gi|296023341|gb|ADG76577.1| putative PAS/PAC sensor protein [Cellulomonas flavigena DSM 20109]
Length = 570
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
P V+D P P+++VN F TGY A+EV GRNCRFLQ D DP
Sbjct: 28 AAPLPMTVSDPRVPGDPVVWVNAAFTRLTGYTAEEVRGRNCRFLQCAD---------TDP 78
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
+ +R L G + Q LLN +KDG+P N+L + +RD G V H +G+Q+ A+
Sbjct: 79 EAIHRLRTALAHGDDVQVVLLNVRKDGSPFWNQLAITQLRDATGQVVHRVGVQVDVTAEA 138
Query: 172 D 172
D
Sbjct: 139 D 139
>gi|255084467|ref|XP_002508808.1| predicted protein [Micromonas sp. RCC299]
gi|226524085|gb|ACO70066.1| predicted protein [Micromonas sp. RCC299]
Length = 1097
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 60/107 (56%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
+AD PD P++Y N FE+ TGY +E +G NCRFLQ P +P V I
Sbjct: 220 TIADFSLPDQPLVYANHGFELITGYSIEETVGHNCRFLQ---------GPGTEPEKVEHI 270
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
RRC+ G+ +L N++K+G VN L L PIR G VTH +GIQ
Sbjct: 271 RRCINAGLPCTVQLKNYRKNGEEFVNYLSLTPIRTARGRVTHYVGIQ 317
>gi|17230367|ref|NP_486915.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
gi|17131969|dbj|BAB74574.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
Length = 1817
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V++DA P +P+IYVN FE TGY+A EV+GRNCRFL D + + E
Sbjct: 451 IVISDAKLPHYPVIYVNSAFEQITGYKATEVVGRNCRFLLGNDTQQS---------AIEE 501
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R L+ G + L N++KDG+ N+L ++PI +D+G ++H IGIQ
Sbjct: 502 LRSALKAGKNCKVILRNYRKDGSLFWNQLSVSPIYNDNGQLSHFIGIQ 549
>gi|448352551|ref|ZP_21541334.1| HTR-like protein [Natrialba hulunbeirensis JCM 10989]
gi|445642613|gb|ELY95680.1| HTR-like protein [Natrialba hulunbeirensis JCM 10989]
Length = 736
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 9/116 (7%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+AD + D PI YVNK F TGY ++VLGRNCRFLQ PL V
Sbjct: 399 IVIADPTEADTPITYVNKEFCELTGYDREDVLGRNCRFLQ---------GPLTAESTVET 449
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
+R + ++LN+++DGTP N L++ P+ DDDG+V++ +G Q A+I+
Sbjct: 450 VREGIANAEPVDVDILNYRRDGTPFWNNLQITPVFDDDGSVSYFVGFQTDVTARIE 505
>gi|448327694|ref|ZP_21517016.1| bacterio-opsin activator [Natrinema versiforme JCM 10478]
gi|445617323|gb|ELY70921.1| bacterio-opsin activator [Natrinema versiforme JCM 10478]
Length = 631
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 65/111 (58%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++YVN+ +E TGY+ D+V+GRNCRFLQ P D
Sbjct: 139 PVGITISDPDREDNPLVYVNEAYEEITGYQYDDVVGRNCRFLQ---------GPDSDEDA 189
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+ ++E EL N++KDGT N + +APIRDD+G VT+ +G Q
Sbjct: 190 IAEMAAAIDEDRPITVELTNYRKDGTEFWNEVTIAPIRDDEGRVTNYVGFQ 240
>gi|256821584|ref|YP_003145547.1| PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase [Kangiella koreensis DSM
16069]
gi|256795123|gb|ACV25779.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Kangiella koreensis DSM 16069]
Length = 887
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+++DA DFP IYVN FE TGY ++++G+NCR LQ P D V
Sbjct: 351 LLISDARADDFPTIYVNPAFERITGYSKEDIIGKNCRILQ---------GPDTDQKVRQA 401
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
I LE+ E + N+KKDGTP N L ++P++DD+ VTH IG+Q
Sbjct: 402 IHNALEQQTEISTIIKNYKKDGTPFWNELLISPVKDDNDNVTHFIGLQ 449
>gi|347540960|ref|YP_004848386.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS sensor(s)
[Pseudogulbenkiania sp. NH8B]
gi|345644139|dbj|BAK77972.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS sensor(s)
[Pseudogulbenkiania sp. NH8B]
Length = 1072
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
+ ++ D PD PIIYVN FE TGY V+GRNCRFLQ RD AQ +
Sbjct: 507 NAVLITDNRRPDNPIIYVNPAFERITGYARAAVIGRNCRFLQGRDT-AQPE--------L 557
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
+ IRR LE E + L N++KDG+ N LR+AP+RD G V+H IG+
Sbjct: 558 TAIRRALENRHEGKALLRNYRKDGSMFWNELRVAPVRDSQGEVSHYIGV 606
>gi|334117274|ref|ZP_08491366.1| PAS/PAC sensor signal transduction histidine kinase [Microcoleus
vaginatus FGP-2]
gi|333462094|gb|EGK90699.1| PAS/PAC sensor signal transduction histidine kinase [Microcoleus
vaginatus FGP-2]
Length = 630
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 63/112 (56%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
+ T F + DA DP+ PIIY N FE TGYR E++G+N RFL D DP
Sbjct: 215 SSTGFTIYDATDPEHPIIYCNPAFESMTGYRRQEIIGKNGRFLHGSD---------TDPA 265
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V IR+ L+ E + L N++KDGT N ++P+RD G +TH IG+Q
Sbjct: 266 AVEIIRQALQTESECKVILKNYRKDGTAFWNCFSISPVRDRLGKLTHFIGVQ 317
>gi|308067316|ref|YP_003868921.1| GAF domain containing protein [Paenibacillus polymyxa E681]
gi|305856595|gb|ADM68383.1| GAF domain containing protein [Paenibacillus polymyxa E681]
Length = 825
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
V+ DA DPD PIIY N F TGY +E++G NCRFLQ P D ++++
Sbjct: 213 VITDATDPDLPIIYANPGFTKLTGYAREEIIGHNCRFLQ---------GPGTDAAALAKV 263
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
RR + E + ELLN++KDGT N L + P+ ++ G V H +GIQ
Sbjct: 264 RRGIREQAMTRVELLNYRKDGTSFWNELLINPVDNEQGDVIHFVGIQ 310
>gi|346320335|gb|EGX89936.1| PAS-like protein [Cordyceps militaris CM01]
Length = 852
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
F + D PD PI+++++ F T Y D V+GRNCRFLQ P +P V
Sbjct: 244 FCLTDPSRPDNPIVFMSEQFNRTTQYGVDYVIGRNCRFLQ---------GPCTNPFSVKR 294
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR LE GIE LN+++DGTP +N + LAP+ D GT+ + IG Q+
Sbjct: 295 IREKLEAGIEHYETFLNYRRDGTPFMNLVMLAPLYDSRGTIRYFIGAQV 343
>gi|76803395|ref|YP_327664.1| signal-transducing histidine kinase [Natronomonas pharaonis DSM
2160]
gi|76559210|emb|CAI50812.1| sensor box histidine kinase [Natronomonas pharaonis DSM 2160]
Length = 596
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 67/118 (56%), Gaps = 10/118 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P +ADA D PI YVN F TGY EVLGRNCRFLQ A R P
Sbjct: 140 PVGISIADARKDDLPITYVNNRFVEITGYARAEVLGRNCRFLQ---GEATRDEP------ 190
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ-IFSEAK 170
++++R +E G EL N++KDGT NR+ ++P+++ +G VTH IG Q SEAK
Sbjct: 191 IAQLRAAIERGETATVELRNYRKDGTMFWNRVTVSPLKNHNGEVTHYIGFQEDISEAK 248
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D D I YVN+ FE TGY A+E +GR+ L A R+ D ++ +
Sbjct: 272 DSDGTIQYVNQAFEELTGYTAEEAVGRDPSLLN-----AGRQ----DETFYEKLWETITA 322
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G +Q L N K G + P+ +D G + + + IQ
Sbjct: 323 GDVWQETLWNQTKTGEYYQADQTIVPVTNDQGEIRNFVAIQ 363
>gi|33357429|pdb|1N9L|A Chain A, Crystal Structure Of The Phot-lov1 Domain From
Chlamydomonas Reinhardtii In The Dark State.
gi|33357432|pdb|1N9N|A Chain A, Crystal Structure Of The Phot-Lov1 Domain From
Chlamydomonas Reinhardtii In Illuminated State. Data Set
Of A Single Crystal.
gi|33357433|pdb|1N9O|A Chain A, Crystal Structure Of The Phot-Lov1 Domain From
Chlamydomonas Reinhardtii In Illuminated State.
Composite Data Set
Length = 109
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVVADA PD P++Y ++ F TGY DEVLG NCRFLQ DP V
Sbjct: 5 TFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEG---------TDPKEVQ 55
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR +++G LLN++KDGTP N L + PI+ DG V+ +G+Q+
Sbjct: 56 KIRDAIKKGEACSVRLLNYRKDGTPFWNLLTVTPIKTPDGRVSKFVGVQV 105
>gi|213406553|ref|XP_002174048.1| PAS family protein [Schizosaccharomyces japonicus yFS275]
gi|212002095|gb|EEB07755.1| PAS family protein [Schizosaccharomyces japonicus yFS275]
Length = 765
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR----AQRRHPLVDP 111
SF+V+D PD PIIY + FE TGY E++GRNCRFLQ D + QRR D
Sbjct: 286 SFLVSDPRQPDCPIIYASSNFETLTGYTQQEIVGRNCRFLQSPDGKLSEGEQRR--FTDH 343
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++C+ E E Q L+NFKK+ P +N + L P+ D ++ IIG QI
Sbjct: 344 CAVYYMKKCVLEEKECQVSLVNFKKNRQPFMNLVTLIPVCWDSDEISFIIGFQI 397
>gi|224826409|ref|ZP_03699511.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Pseudogulbenkiania ferrooxidans 2002]
gi|224601510|gb|EEG07691.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Pseudogulbenkiania ferrooxidans 2002]
Length = 1072
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
+ ++ D PD PIIYVN FE TGY V+GRNCRFLQ RD AQ +
Sbjct: 507 NAVLITDNRRPDNPIIYVNPAFERITGYARATVIGRNCRFLQGRDT-AQPE--------L 557
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
+ IRR LE E + L N++KDG+ N LR+AP+RD G V+H IG+
Sbjct: 558 TAIRRALENRHEGKALLRNYRKDGSMFWNELRVAPVRDSQGEVSHYIGV 606
>gi|414877201|tpg|DAA54332.1| TPA: hypothetical protein ZEAMMB73_254266 [Zea mays]
Length = 750
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 124/290 (42%), Gaps = 29/290 (10%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
+E + W G +R + A G+R+++FGG + ++D VL+L EW
Sbjct: 30 NVETMAWSLVATTGQCPGTRDSHGAALVGHRMLVFGGTNGGRK-VNDLHVLDLRTG--EW 86
Query: 347 RRVSVKSSPP--GRWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQPTWIEVS 402
R K +PP R HT++ + G LVVFGG G L DV VLD+ + EV
Sbjct: 87 TRPQCKGAPPPSPRESHTVTVVGGDRLVVFGGSGEGEGNYLCDVHVLDVPTMTWSSPEVR 146
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS-WSPP 461
GG P PR HS+ + V G C D D +LD+ D W P SP
Sbjct: 147 GGHAPAPRDSHSAVAVGRRLFVFGGDCGDR--YHGDVDVLDV--DTMAWSMFPVKGASPG 202
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
R GH+ G +KV + GG+ + + + +D+ + W QLE
Sbjct: 203 VRAGHAAMSVG-SKVYIIGGVGDKHYY----SDVWVLDVTNRS--WSQLEV--------- 246
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
P R H AV+M I I+GG ++L +L E P+ R
Sbjct: 247 CGQRPQGRFSHTAVAMNT-DIAIYGGCGEDERPLNELLILQLGSEHPNGR 295
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 336 VLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQ 395
VL L+ W V+ PG ++L G ++VFGG +ND+ VLDL +
Sbjct: 26 VLKLNVETMAWSLVATTGQCPGTRDSHGAALVGHRMLVFGGTNGGRKVNDLHVLDLRTGE 85
Query: 396 PTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREI 454
T + G PP PR H+ ++ G +LVV GG + G L D ++LD+ T E+
Sbjct: 86 WTRPQCKGAPPPSPRESHTVTVVGGDRLVVFGGSGEGEGNYLCDVHVLDVPTMTWSSPEV 145
Query: 455 PTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESY--TIDLGDEEPQWKQLEC 512
+P R HS GR ++ +FGG G+ Y +D+ D + +
Sbjct: 146 RGGHAPAPRDSHSAVAVGR-RLFVFGG---------DCGDRYHGDVDVLDVD----TMAW 191
Query: 513 NAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRI 572
+ F G+ V R H A+S+ ++ I GG + H S +++LD + SW
Sbjct: 192 SMFPVKGASPGV----RAGHAAMSV-GSKVYIIGG-VGDKHYYSDVWVLDVTNR--SWSQ 243
Query: 573 LNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
L V GQ P+ + H T V T + + GG +E LNEL L L S+
Sbjct: 244 LEVCGQRPQGRFSH-TAVAMNTDIAIYGGCGEDERPLNELLILQLGSEH 291
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++ + W F V+GA R +A + G+++ + GG G + D +V LD N
Sbjct: 182 DVLDVDTMAWSMFPVKGASPGVRAGHAAMSVGSKVYIIGGVG-DKHYYSDVWV--LDVTN 238
Query: 344 PEWRRVSV-KSSPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ V P GR+ HT ++N + + ++GGCG + LN++ +L L ++ P
Sbjct: 239 RSWSQLEVCGQRPQGRFSHTAVAMN-TDIAIYGGCGEDERPLNELLILQLGSEHPN 293
>gi|159044552|ref|YP_001533346.1| putative blue-light photoreceptor [Dinoroseobacter shibae DFL 12]
gi|157912312|gb|ABV93745.1| putative blue-light photoreceptor [Dinoroseobacter shibae DFL 12]
Length = 139
Score = 90.9 bits (224), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
S V +D PD P+IYV+ F + TGY +EVLGRNCRFLQ P +P V
Sbjct: 37 SVVFSDPSQPDNPMIYVSDAFLVQTGYTLEEVLGRNCRFLQ---------GPDTNPHAVE 87
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR+ L+ F ++LN++KDG+ VNRLR+ PI D +G + G Q
Sbjct: 88 AIRQGLKAETRFTIDILNYRKDGSAFVNRLRIRPIYDPEGNLMFFAGAQ 136
>gi|254508393|ref|ZP_05120514.1| two-component hybrid sensor and regulator [Vibrio parahaemolyticus
16]
gi|219548706|gb|EED25710.1| two-component hybrid sensor and regulator [Vibrio parahaemolyticus
16]
Length = 1594
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+T + VV+DA PD PII+ NK FE+ TGY EVLG+NCRFLQ D R Q+
Sbjct: 424 STTSGIVVSDATQPDLPIIFANKAFEMQTGYSRQEVLGKNCRFLQ-NDDRDQKG------ 476
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ ++R + + N++KDGT N L++ P+ ++ G +TH IGIQ
Sbjct: 477 --IDQLRDAIANQTSCSVVIRNYRKDGTLFYNNLKIDPVFNEQGEMTHFIGIQ 527
>gi|66828401|ref|XP_647555.1| Kelch repeat-containing protein [Dictyostelium discoideum AX4]
gi|60475573|gb|EAL73508.1| Kelch repeat-containing protein [Dictyostelium discoideum AX4]
Length = 514
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 160/362 (44%), Gaps = 61/362 (16%)
Query: 293 WRKFTVRGAVEP-SRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
WR ++ EP SRC + L +FGG + + ++D F LN++ EW V V
Sbjct: 2 WRVEQIKN--EPNSRCAHQSETIDGELYVFGGWNDDNEMLNDLFKLNIETW--EWEEVKV 57
Query: 352 KSS-PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
+++ R GH+L+S NG L+VFGG G LND+F+ D + I +G P R
Sbjct: 58 ENNFITPRNGHSLNSYNGK-LIVFGGGSFSGFLNDIFIFDPKTVEWNCINTTGDIPS-GR 115
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS----------- 459
S HSS ++ G KL + GG D L +D Y LDL K W++I +
Sbjct: 116 SKHSSTLL-GDKLYIFGGG-DGIRLYNDMYCLDLL--KYEWKKINQENNNSNNNNINSNN 171
Query: 460 --------------PPSRLGHSLSVYGRTK-VLMFGGLAKSGHLRLRSGESYTIDLGDEE 504
P +R GH++ +G K +++F G A G R+ + + E
Sbjct: 172 NKNDKNNENNDNLIPSARWGHTMVDFGDGKHLILFAGHA--GTKRINDLHLFNV----ET 225
Query: 505 PQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPS 564
+W+ T + S P PR H A +M +IIFGG H + ++ LD
Sbjct: 226 NEWRHQ-----TLFSTDSDDTPLPRAGHSA-NMIGPHMIIFGGGDG--HVINDIYGLDTR 277
Query: 565 EEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEE-----WVLNELHELCLAS 619
K W++ V P HS VV ++L+ GG G + +++ L +L L
Sbjct: 278 VWK-WWKLRTV--NAPDARCAHSATVV-KNKLLIFGGGNGVQCLKKLLIMDNLEQLELLY 333
Query: 620 KQ 621
K
Sbjct: 334 KN 335
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 38/222 (17%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
+ V W G + R S+ G++L +FGG G ++ +D + LD EW++
Sbjct: 98 KTVEWNCINTTGDIPSGRSKHSSTLLGDKLYIFGG-GDGIRLYNDMYC--LDLLKYEWKK 154
Query: 349 VSVKSS-------------------------PPGRWGHTLSSL-NGSWLVVFGGCGRQGL 382
++ +++ P RWGHT+ +G L++F G
Sbjct: 155 INQENNNSNNNNINSNNNKNDKNNENNDNLIPSARWGHTMVDFGDGKHLILFAGHAGTKR 214
Query: 383 LNDVFVLDLDA---KQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDT 439
+ND+ + +++ + T PLPR+ HS+ +I G +++ GG G +++D
Sbjct: 215 INDLHLFNVETNEWRHQTLFSTDSDDTPLPRAGHSANMI-GPHMIIFGGGD--GHVINDI 271
Query: 440 YLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGG 481
Y LD K W ++ T +P +R HS +V + K+L+FGG
Sbjct: 272 YGLDTRVWK--WWKLRTVNAPDARCAHSATVV-KNKLLIFGG 310
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 315 GNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSS-----PPGRWGHTLSSLNGS 369
G L+LF G + ++D + N++ EWR ++ S+ P R GH+ +++ G
Sbjct: 200 GKHLILFAGHA-GTKRINDLHLFNVETN--EWRHQTLFSTDSDDTPLPRAGHS-ANMIGP 255
Query: 370 WLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGG- 428
+++FGG G ++ND++ LD + W ++ P R HS+ +++ L+ GG
Sbjct: 256 HMIIFGG-GDGHVINDIY--GLDTRVWKWWKLRTVNAPDARCAHSATVVKNKLLIFGGGN 312
Query: 429 ---CTDAGVLLSDTYLLD-LTTDKPMWREIPT 456
C +++ + L+ L ++ + + IPT
Sbjct: 313 GVQCLKKLLIMDNLEQLELLYKNRHLIKSIPT 344
>gi|260099972|pdb|3HJK|A Chain A, 2.0 Angstrom Structure Of The Ile74val Variant Of Vivid
(Vvd).
gi|260099973|pdb|3HJK|B Chain B, 2.0 Angstrom Structure Of The Ile74val Variant Of Vivid
(Vvd)
Length = 154
Score = 90.5 bits (223), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPL 108
T + V+ D D PI+Y ++ F TGY EVLGRNCRFLQ D P++ R++
Sbjct: 37 TSCALVLCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKY-- 94
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
VD ++ +R+ ++ E Q E++NFKK+G VN L + P+RD+ G + +G Q +E
Sbjct: 95 VDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCETE 154
>gi|118025366|emb|CAJ13845.2| putative white-collar-1c protein [Mucor circinelloides]
Length = 596
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 70/114 (61%), Gaps = 6/114 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR----AQRRHPLVDP 111
SFVV+DA D P+IY + FE TGY +E++G+NCRFLQ D + ++R+H D
Sbjct: 41 SFVVSDARQYDCPVIYCSPAFERLTGYTNNEIVGKNCRFLQSPDGQVTCGSRRQH--TDN 98
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++ L +G E Q ++N++K G P VN + + PI D+G V + +G+Q+
Sbjct: 99 QAVYHLKAQLNQGKEHQASIINYRKGGQPFVNLVTVIPILGDNGQVDYFVGLQV 152
>gi|220702747|gb|ACL81172.1| putative blue-light photoreceptor PCMADA2 [Pilobolus crystallinus]
Length = 616
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ--RRHPLVDPVV 113
SFVV DA DFP++YV+ VFE TGY +V+G+NCRFLQ D R D
Sbjct: 91 SFVVVDARQYDFPLVYVSPVFEKLTGYSPADVMGKNCRFLQSPDGHVAIGSRRKYTDNTT 150
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V I+ + +G E Q ++N++K G P VN L + PI D + + +G+Q+
Sbjct: 151 VYHIKTHMVQGKESQSSIINYRKTGQPFVNLLTVIPISWDSDEIDYFMGLQV 202
>gi|220702749|gb|ACL81173.1| putative blue-light photoreceptor PCMADA3 [Pilobolus crystallinus]
Length = 638
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 70/114 (61%), Gaps = 6/114 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR----AQRRHPLVDP 111
+FVV+DA D PIIY + FE TGY E++G+NCRFLQ D + ++R+H D
Sbjct: 93 AFVVSDAKQYDMPIIYCSPAFERLTGYTNKEIVGKNCRFLQSPDGKVTCGSRRQH--TDN 150
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V I+ + +G E Q ++N++KDG P VN + + P+ D++ T+ +G+Q+
Sbjct: 151 QAVYHIKGQINQGKEHQASIINYRKDGQPFVNLVTVIPLWDENNTIELFVGLQV 204
>gi|71028830|ref|XP_764058.1| serine/threonine protein phosphatase [Theileria parva strain
Muguga]
gi|68351012|gb|EAN31775.1| serine/threonine protein phosphatase, putative [Theileria parva]
Length = 798
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 131/267 (49%), Gaps = 32/267 (11%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGC----GRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
PP R+GHT +S+ +V+FGG GR + +D F+ D+ W ++ PP PR
Sbjct: 19 PPPRFGHTSTSVGSGKVVLFGGAVGDVGRYTITSDSFLYDVTTNY--WTKLQTENPPSPR 76
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVLLSDT-YLLDLTTDKPM-WREIPTS-WSPPSRLGHS 467
+ H++ +E ++VV GG T G L SD +LLDL +K + W +PT+ SP R GH+
Sbjct: 77 AAHAAACVETMQVVVFGGATGGGALSSDDLFLLDLRREKQLSWIIVPTTGRSPGRRYGHT 136
Query: 468 LSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPP 527
+ V+ + +++ GG + S + + +++ W ++ S + +PP
Sbjct: 137 M-VFSKPNLILIGG----NDGQQPSNDVWVLNVEQSPFTWNEV-------TFSPTIQLPP 184
Query: 528 PRLDHVAVSMPC-----GRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVP---GQP 579
R+ H A + C G I+IFGG S + ++ L + +W + P G
Sbjct: 185 TRVYHSA-DLCCEGPANGMIVIFGGRGTESRSLNDVWGLRQHRDG-TWDWIEAPVNSGTK 242
Query: 580 PKFAWGHSTCVVGGTRVLVLGGHTGEE 606
P + HS C G++ +VLGG + +
Sbjct: 243 PDPRYQHS-CAFVGSKFVVLGGRSDSD 268
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 17/197 (8%)
Query: 299 RGAVEPSRCNFSACAAGN-RLVLFGGEGVNM---QPMDDTFVLNLDAANPEWRRVSVKSS 354
+G V P R ++ + G+ ++VLFGG ++ D+F+ D W ++ ++
Sbjct: 15 QGDVPPPRFGHTSTSVGSGKVVLFGGAVGDVGRYTITSDSFLY--DVTTNYWTKLQTENP 72
Query: 355 PPGRWGHTLSSLNGSWLVVFGGCGRQGLL--NDVFVLDL-DAKQPTWIEVSGGAPPLPRS 411
P R H + + +VVFGG G L +D+F+LDL KQ +WI V R
Sbjct: 73 PSPRAAHAAACVETMQVVVFGGATGGGALSSDDLFLLDLRREKQLSWIIVPTTGRSPGRR 132
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI---PTSWSPPSRLGHSL 468
+ + + L++ GG D +D ++L++ W E+ PT PP+R+ HS
Sbjct: 133 YGHTMVFSKPNLILIGG-NDGQQPSNDVWVLNVEQSPFTWNEVTFSPTIQLPPTRVYHSA 191
Query: 469 SVY----GRTKVLMFGG 481
+ +++FGG
Sbjct: 192 DLCCEGPANGMIVIFGG 208
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 15/206 (7%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGE-GVNMQPMDDTFVLNLDAANP-EWRRVS 350
W K P + +AC ++V+FGG G DD F+L+L W V
Sbjct: 64 WTKLQTENPPSPRAAHAAACVETMQVVVFGGATGGGALSSDDLFLLDLRREKQLSWIIVP 123
Query: 351 VKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAP--- 406
PG R+GHT+ + L++ GG Q NDV+VL+++ TW EV+
Sbjct: 124 TTGRSPGRRYGHTM-VFSKPNLILIGGNDGQQPSNDVWVLNVEQSPFTWNEVTFSPTIQL 182
Query: 407 PLPRSWHSSCI-IEGSK---LVVSGGCTDAGVLLSDTYLLDLTTDKPM-WREIPTS--WS 459
P R +HS+ + EG +V+ GG L+D + L D W E P +
Sbjct: 183 PPTRVYHSADLCCEGPANGMIVIFGGRGTESRSLNDVWGLRQHRDGTWDWIEAPVNSGTK 242
Query: 460 PPSRLGHSLSVYGRTKVLMFGGLAKS 485
P R HS + G +K ++ GG + S
Sbjct: 243 PDPRYQHSCAFVG-SKFVVLGGRSDS 267
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 514 AFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHS---PSQLFLLDPSEEKPSW 570
A+ V Q VPPPR H + S+ G++++FGG++ + S FL D + W
Sbjct: 7 AYQKVVPQQGDVPPPRFGHTSTSVGSGKVVLFGGAVGDVGRYTITSDSFLYDVTTNY--W 64
Query: 571 RILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTG 604
L PP H+ V +V+V GG TG
Sbjct: 65 TKLQTE-NPPSPRAAHAAACVETMQVVVFGGATG 97
>gi|384418859|ref|YP_005628219.1| two-component system sensor-response regulator hybrid protein
[Xanthomonas oryzae pv. oryzicola BLS256]
gi|353461772|gb|AEQ96051.1| two-component system sensor-response regulator hybrid protein
[Xanthomonas oryzae pv. oryzicola BLS256]
Length = 502
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 9/109 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V D PD PI++ N+ F TGY A+EV+G NCRFLQ P DP +S+
Sbjct: 3 MTVTDPHLPDNPIVFANRAFLEMTGYSAEEVIGNNCRFLQ---------GPETDPASISD 53
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+R+ +E EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 54 VRQSIETRSEFATEVLNYRKDGSSFWNALFVSPVFDDQGNLVYFFGSQL 102
>gi|168701749|ref|ZP_02734026.1| multi-sensor hybrid histidine kinase [Gemmata obscuriglobus UQM
2246]
Length = 1178
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P +ADA PD P++YVN FE TGY A E LGRNCRFLQ + DP
Sbjct: 700 PQGVAIADATRPDHPLVYVNPGFERMTGYPAAEALGRNCRFLQGKG---------TDPSA 750
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ +R L +G ELLN++KDG P N L +AP+RD G +TH + IQ
Sbjct: 751 VAAVRAALRDGRAALVELLNYRKDGKPFWNALTVAPVRDGAGALTHFVAIQ 801
>gi|374311707|ref|YP_005058137.1| PAS/PAC sensor signal transduction histidine kinase [Granulicella
mallensis MP5ACTX8]
gi|358753717|gb|AEU37107.1| PAS/PAC sensor signal transduction histidine kinase [Granulicella
mallensis MP5ACTX8]
Length = 519
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
Query: 49 FYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPL 108
+ + T VA A PD P++YVN FE TGY EV GRNCRFL+ + R P
Sbjct: 156 IFRSVTTGISVASATLPDLPLVYVNPAFEEMTGYSRAEVQGRNCRFLEGNE----RSQPG 211
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
+ +V + +G+ L NF+KDGTP N L L+PI DD+G +TH +GIQ
Sbjct: 212 L--AIVRDALSNRRKGVAI---LKNFRKDGTPFWNELSLSPISDDNGQLTHYVGIQTDVT 266
Query: 169 AKIDL 173
++DL
Sbjct: 267 KRVDL 271
>gi|308812864|ref|XP_003083739.1| putative blue light receptor (ISS) [Ostreococcus tauri]
gi|116055620|emb|CAL58288.1| putative blue light receptor (ISS) [Ostreococcus tauri]
Length = 738
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ D PD PI++ + F FTGY DE+LGRNCRFLQ P D V+
Sbjct: 205 SFVITDPSLPDHPIVFASDGFMEFTGYSVDEILGRNCRFLQ---------GPKTDRAAVA 255
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEA---KID 172
+IR +E G E LLN+ K G N LAP+RD+ G V G+Q+ A + +
Sbjct: 256 KIREAIENGEECTVRLLNYTKTGEEFWNMFTLAPVRDEQGIVRFFAGVQVDITAHDPQTE 315
Query: 173 LNHVSYPVFKENCN 186
V+ FKE N
Sbjct: 316 HETVAEITFKEEDN 329
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+F V DA PD PI+Y + F TGY A EV+G NCRFLQ V
Sbjct: 30 TFTVCDATKPDCPIVYASDGFLRMTGYAAAEVIGYNCRFLQGEKTNKND---------VR 80
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
E+R ++ G + LLN+KKDGTP N L +AP++ DGTV IG+Q
Sbjct: 81 ELREAIKNGDRWSVRLLNYKKDGTPFWNYLVVAPVKLADGTVVKYIGVQ 129
>gi|429857829|gb|ELA32671.1| vivid pas protein vvd [Colletotrichum gloeosporioides Nara gc5]
Length = 224
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ----RRHPLVDP 111
+ ++ D PD PI+Y ++ F + TGY E++G+NCRFLQ + + R+H VD
Sbjct: 109 ALLLCDLEQPDCPIVYASEHFSLLTGYSNKEIMGKNCRFLQAPGGKVRKESSRKH--VDK 166
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
+ ++++ +E E Q E+LNFKKDGTP VN L + P+R D + +G Q+ E
Sbjct: 167 STIKKMKKAVEANTEVQLEVLNFKKDGTPFVNILTMIPVRWDSPGFRYSVGFQVERE 223
>gi|347447528|pdb|3RH8|B Chain B, Crystal Structure Of The Light-State Dimer Of Fungal
Blue-Light Photoreceptor Vivid
gi|347447529|pdb|3RH8|D Chain D, Crystal Structure Of The Light-State Dimer Of Fungal
Blue-Light Photoreceptor Vivid
Length = 148
Score = 90.1 bits (222), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPL 108
T + ++ D D PI+Y ++ F TGY EVLGRNCRFLQ D P++ R++
Sbjct: 33 TSCALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKY-- 90
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
VD ++ IR+ ++ E Q E++NFKK+G VN L + P+RD+ G + +G Q
Sbjct: 91 VDSNTINTIRKAIDRNAEVQVEVVNFKKNGQRFVNFLTIIPVRDETGEYRYSMGFQ 146
>gi|448651252|ref|ZP_21680321.1| HTR-like protein [Haloarcula californiae ATCC 33799]
gi|445770779|gb|EMA21837.1| HTR-like protein [Haloarcula californiae ATCC 33799]
Length = 726
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P + D PD P+IY N + TGY E+LG+NCR LQ + DP
Sbjct: 281 PVGVTITDPNQPDNPLIYANDHYRELTGYSLPELLGKNCRILQGEN---------TDPEP 331
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V +R ++ G + EL N++KDGT NR+R+AP+RDDDGTV + +G Q
Sbjct: 332 VDALRDAIDAGEQVSVELRNYRKDGTEFWNRVRIAPVRDDDGTVVNYVGFQ 382
>gi|448640838|ref|ZP_21677625.1| HTR-like protein [Haloarcula sinaiiensis ATCC 33800]
gi|445761363|gb|EMA12611.1| HTR-like protein [Haloarcula sinaiiensis ATCC 33800]
Length = 726
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P + D PD P+IY N + TGY E+LG+NCR LQ + DP
Sbjct: 281 PVGVTITDPNQPDNPLIYANDHYRELTGYSLPELLGKNCRILQGEN---------TDPEP 331
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V +R ++ G + EL N++KDGT NR+R+AP+RDDDGTV + +G Q
Sbjct: 332 VDALRDAIDAGEQVSVELRNYRKDGTEFWNRVRIAPVRDDDGTVVNYVGFQ 382
>gi|152964317|ref|YP_001360101.1| PAS/PAC sensor protein [Kineococcus radiotolerans SRS30216]
gi|151358834|gb|ABS01837.1| putative PAS/PAC sensor protein [Kineococcus radiotolerans
SRS30216]
Length = 723
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SF ++D PD P+++ N FE TGY EVLG+NCRFLQ P D V+
Sbjct: 182 SFTISDPTKPDNPLVWTNPAFERVTGY-GREVLGQNCRFLQ---------GPGTDREAVA 231
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IRR LE G LLN++KDGT N + ++P+ D DG +TH +G+Q
Sbjct: 232 RIRRALETGDTVTELLLNYRKDGTAFWNEVVISPVHDADGRLTHFVGVQ 280
>gi|262368023|pdb|3IS2|A Chain A, 2.3 Angstrom Crystal Structure Of A Cys71 Sulfenic Acid
Form Of Vivid
Length = 154
Score = 90.1 bits (222), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPL 108
T + ++ D D PI+Y ++ F TGY EVLGRNCRFLQ D P++ R++
Sbjct: 37 TSXALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKY-- 94
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
VD ++ +R+ ++ E Q E++NFKK+G VN L + P+RD+ G + +G Q +E
Sbjct: 95 VDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCETE 154
>gi|223942901|gb|ACN25534.1| unknown [Zea mays]
gi|223948023|gb|ACN28095.1| unknown [Zea mays]
gi|414877202|tpg|DAA54333.1| TPA: hypothetical protein ZEAMMB73_254266 [Zea mays]
Length = 607
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 124/290 (42%), Gaps = 29/290 (10%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
+E + W G +R + A G+R+++FGG + ++D VL+L EW
Sbjct: 40 NVETMAWSLVATTGQCPGTRDSHGAALVGHRMLVFGGTNGGRK-VNDLHVLDLRTG--EW 96
Query: 347 RRVSVKSSPP--GRWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQPTWIEVS 402
R K +PP R HT++ + G LVVFGG G L DV VLD+ + EV
Sbjct: 97 TRPQCKGAPPPSPRESHTVTVVGGDRLVVFGGSGEGEGNYLCDVHVLDVPTMTWSSPEVR 156
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS-WSPP 461
GG P PR HS+ + V G C D D +LD+ D W P SP
Sbjct: 157 GGHAPAPRDSHSAVAVGRRLFVFGGDCGDR--YHGDVDVLDV--DTMAWSMFPVKGASPG 212
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
R GH+ G +KV + GG+ + + + +D+ + W QLE
Sbjct: 213 VRAGHAAMSVG-SKVYIIGGVGDKHYY----SDVWVLDVTNRS--WSQLEV--------- 256
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
P R H AV+M I I+GG ++L +L E P+ R
Sbjct: 257 CGQRPQGRFSHTAVAMNT-DIAIYGGCGEDERPLNELLILQLGSEHPNGR 305
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 336 VLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQ 395
VL L+ W V+ PG ++L G ++VFGG +ND+ VLDL +
Sbjct: 36 VLKLNVETMAWSLVATTGQCPGTRDSHGAALVGHRMLVFGGTNGGRKVNDLHVLDLRTGE 95
Query: 396 PTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREI 454
T + G PP PR H+ ++ G +LVV GG + G L D ++LD+ T E+
Sbjct: 96 WTRPQCKGAPPPSPRESHTVTVVGGDRLVVFGGSGEGEGNYLCDVHVLDVPTMTWSSPEV 155
Query: 455 PTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESY--TIDLGDEEPQWKQLEC 512
+P R HS GR ++ +FGG G+ Y +D+ D + +
Sbjct: 156 RGGHAPAPRDSHSAVAVGR-RLFVFGG---------DCGDRYHGDVDVLDVD----TMAW 201
Query: 513 NAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRI 572
+ F G+ V R H A+S+ ++ I GG + H S +++LD + SW
Sbjct: 202 SMFPVKGASPGV----RAGHAAMSV-GSKVYIIGG-VGDKHYYSDVWVLDVTNR--SWSQ 253
Query: 573 LNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
L V GQ P+ + H T V T + + GG +E LNEL L L S+
Sbjct: 254 LEVCGQRPQGRFSH-TAVAMNTDIAIYGGCGEDERPLNELLILQLGSEH 301
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++ + W F V+GA R +A + G+++ + GG G + D +V LD N
Sbjct: 192 DVLDVDTMAWSMFPVKGASPGVRAGHAAMSVGSKVYIIGGVG-DKHYYSDVWV--LDVTN 248
Query: 344 PEWRRVSV-KSSPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ V P GR+ HT ++N + + ++GGCG + LN++ +L L ++ P
Sbjct: 249 RSWSQLEVCGQRPQGRFSHTAVAMN-TDIAIYGGCGEDERPLNELLILQLGSEHPN 303
>gi|348029074|ref|YP_004871760.1| PAS/PAC sensor protein [Glaciecola nitratireducens FR1064]
gi|347946417|gb|AEP29767.1| putative PAS/PAC sensor protein [Glaciecola nitratireducens FR1064]
Length = 408
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 13/132 (9%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ--YRDPRAQRRHPLVDPVVVS 115
++D DP P+I+VN+ FE TGY+ EVLG+NCRFLQ ++DP + + +S
Sbjct: 28 TISDMKDPQRPLIFVNEGFEYTTGYQHQEVLGKNCRFLQGPHKDPD--------NDLPLS 79
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI---D 172
E+++ L++ L N++K G NRL L PI DDD ++TH +G+Q A+I +
Sbjct: 80 ELKQALDQAKPCTVLLKNYRKSGELFWNRLSLTPIFDDDKSLTHFVGVQTDVTAEILAKE 139
Query: 173 LNHVSYPVFKEN 184
+SY KEN
Sbjct: 140 AAAISYKKLKEN 151
>gi|149243082|pdb|2PD8|A Chain A, 1.8 Angstrom Crystal Structure Of The Cys71ser Mutant Of
Vivid
gi|149243083|pdb|2PD8|B Chain B, 1.8 Angstrom Crystal Structure Of The Cys71ser Mutant Of
Vivid
Length = 149
Score = 90.1 bits (222), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 6/116 (5%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPL 108
T ++ ++ D D PI+Y ++ F TGY EVLGRNCRFLQ D P++ R++
Sbjct: 34 TSSALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKY-- 91
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
VD ++ +R+ ++ E Q E++NFKK+G VN L + P+RD+ G + +G Q
Sbjct: 92 VDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQ 147
>gi|55377011|ref|YP_134861.1| HTR-like protein [Haloarcula marismortui ATCC 43049]
gi|55229736|gb|AAV45155.1| HTR-like protein [Haloarcula marismortui ATCC 43049]
Length = 726
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P + D PD P+IY N + TGY E+LG+NCR LQ + DP
Sbjct: 281 PVGVTITDPNQPDNPLIYANDHYRELTGYSLPELLGKNCRILQGEN---------TDPEP 331
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V +R ++ G + EL N++KDGT NR+R+AP+RDDDGTV + +G Q
Sbjct: 332 VDALRDAIDAGEQVSVELRNYRKDGTEFWNRVRIAPVRDDDGTVVNYVGFQ 382
>gi|384250283|gb|EIE23763.1| putative blue light receptor [Coccomyxa subellipsoidea C-169]
Length = 803
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 9/117 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVVADA PD P+++ ++ F TGY A+EVLG NCRFLQ DP V+
Sbjct: 45 TFVVADATLPDCPLVFASEGFLSMTGYSAEEVLGHNCRFLQGEG---------TDPKEVA 95
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
IR +++G LLN+++DGTP N L + PI+ +DG V+ +G+Q+ +K +
Sbjct: 96 IIRDAVKKGEGCSVRLLNYRRDGTPFWNLLTMTPIKTEDGKVSKFVGVQVDVTSKTE 152
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+F + D PD PI++ + F + Y EVLGRNCRFLQ P DP +S
Sbjct: 284 NFCICDPNLPDNPIVFASDGFLEMSQYDRFEVLGRNCRFLQ---------GPDTDPKAIS 334
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR ++ E +LN++K G P N L +AP+ D DGT IG+Q+
Sbjct: 335 IIRDAIKSQSEATVRILNYRKSGQPFWNMLTIAPMADVDGTSRFFIGVQV 384
>gi|302828158|ref|XP_002945646.1| hypothetical protein VOLCADRAFT_102618 [Volvox carteri f.
nagariensis]
gi|300268461|gb|EFJ52641.1| hypothetical protein VOLCADRAFT_102618 [Volvox carteri f.
nagariensis]
Length = 1637
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSAC--AAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
T++ + W +G +R N +AC NRLV+FGG + ++D L+LD+
Sbjct: 343 TMDRMEWHNQPCKGEKPTARYNHAACYDEENNRLVIFGGRTAERKRLNDVAFLDLDSWT- 401
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
W + S + + P +++ +V+FGG G ND+F+LDL A Q + SG
Sbjct: 402 -WYKPSTEGAAPSPREQAVATFWAGNMVLFGGHAIGGRTNDLFLLDLGAWQWSQPAFSGT 460
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-PPSR 463
AP PR + CI G+ L V GG + +L D +++D T W EIP PP R
Sbjct: 461 APS-PRQACALCIGHGNLLFVHGGRNN--FVLEDLHVMDFVTK--TWTEIPCEGRCPPPR 515
Query: 464 LGHSLSVYGRTKVLMFGGLAKSG 486
H + V+ + + +FGGL + G
Sbjct: 516 HSHHIHVH-KDNLYLFGGLDELG 537
>gi|262368024|pdb|3IS2|B Chain B, 2.3 Angstrom Crystal Structure Of A Cys71 Sulfenic Acid
Form Of Vivid
Length = 154
Score = 90.1 bits (222), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPL 108
T + ++ D D PI+Y ++ F TGY EVLGRNCRFLQ D P++ R++
Sbjct: 37 TSCALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKY-- 94
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
VD ++ +R+ ++ E Q E++NFKK+G VN L + P+RD+ G + +G Q +E
Sbjct: 95 VDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCETE 154
>gi|164426650|ref|XP_957606.2| hypothetical protein NCU03967 [Neurospora crassa OR74A]
gi|157071421|gb|EAA28370.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 195
Score = 90.1 bits (222), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPL 108
T + ++ D D PI+Y ++ F TGY EVLGRNCRFLQ D P++ R++
Sbjct: 78 TSCALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKY-- 135
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
VD ++ +R+ ++ E Q E++NFKK+G VN L + P+RD+ G + +G Q +E
Sbjct: 136 VDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCETE 195
>gi|12831203|gb|AAK08514.1|AF338412_1 vivid PAS protein VVD [Neurospora crassa]
gi|40882318|emb|CAF06140.1| vivid PAS protein VVD [Neurospora crassa]
gi|336466364|gb|EGO54529.1| vivid PAS protein [Neurospora tetrasperma FGSC 2508]
gi|350286771|gb|EGZ68018.1| vivid PAS protein [Neurospora tetrasperma FGSC 2509]
Length = 186
Score = 90.1 bits (222), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPL 108
T + ++ D D PI+Y ++ F TGY EVLGRNCRFLQ D P++ R++
Sbjct: 69 TSCALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKY-- 126
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
VD ++ +R+ ++ E Q E++NFKK+G VN L + P+RD+ G + +G Q +E
Sbjct: 127 VDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCETE 186
>gi|422294611|gb|EKU21911.1| hypothetical protein NGA_0015702 [Nannochloropsis gaditana CCMP526]
Length = 228
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 12/128 (9%)
Query: 37 DDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ 96
DD + +L L T +FV+ D PD PI+Y + F TGY+ D++LGRNCRFLQ
Sbjct: 85 DDPDYTLVKAL---QTAQQNFVITDPTLPDNPIVYASGGFLSLTGYQMDQILGRNCRFLQ 141
Query: 97 YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGT 156
P DP V +IRR +E+G + LLN++ DG+ N+ +A +R DG
Sbjct: 142 ---------GPDTDPAAVDKIRRAIEDGTDGSVCLLNYRADGSTFWNQFFIAALRGADGN 192
Query: 157 VTHIIGIQ 164
+ + +G+Q
Sbjct: 193 IVNYVGVQ 200
>gi|359785711|ref|ZP_09288858.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Halomonas sp. GFAJ-1]
gi|359296944|gb|EHK61185.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Halomonas sp. GFAJ-1]
Length = 815
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 63/117 (53%), Gaps = 17/117 (14%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
++ ++ DA D P++YVN FE TGY VLGRNCRFLQ D
Sbjct: 259 SSTNGVIIVDALSDDLPMVYVNAAFERITGYSRQAVLGRNCRFLQGED------------ 306
Query: 112 VVVSEIRRCLEEGIEFQGE----LLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
E RR L +GI Q E + N++ DGTP N L ++P+RD+ G VTH IG+Q
Sbjct: 307 -TAPESRRQLRKGINAQREVHVVIRNYRCDGTPFWNDLYISPVRDEAGVVTHFIGVQ 362
>gi|399911282|ref|ZP_10779596.1| sensory box/FOG: EAL domain/GGDEF domain containing protein
[Halomonas sp. KM-1]
Length = 743
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TP ++ADA PD P++Y N+ F TGY DEVLGRNCR+L + DP
Sbjct: 186 ATPNGIMIADALLPDTPLVYANESFYRTTGYTPDEVLGRNCRYLHGEE---------TDP 236
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ +R L+ E + LLN++KD + N L ++PI D+ TH IGIQ
Sbjct: 237 QALDALRSALQRHTEIEVTLLNYRKDKSTFWNHLSISPILDEHERCTHFIGIQ 289
>gi|358381372|gb|EHK19047.1| hypothetical protein TRIVIDRAFT_81343 [Trichoderma virens Gv29-8]
Length = 1038
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D + A + VD
Sbjct: 371 AFVVCDVTMNDCPIIYVSDNFQNLTGYSRHEIIGKNCRFLQAPDGKVEAGSKREFVDDGA 430
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++R ++EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 431 VFNLKRMIQEGREVQQSLINYRKGGKPFLNLLTMIPIPWDTDEIRYFIGFQI 482
>gi|56130904|gb|AAV80185.1| white collar 1 [Trichoderma reesei]
gi|340518099|gb|EGR48341.1| blue light regulator 1 [Trichoderma reesei QM6a]
Length = 1040
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D + A + VD
Sbjct: 373 AFVVCDVTMNDCPIIYVSDNFQNLTGYSRHEIMGQNCRFLQAPDGKVEAGSKREFVDDGA 432
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++R ++EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 433 VYNLKRMIQEGREVQQSLINYRKGGKPFLNLLTMIPIPWDTDEIRYFIGFQI 484
>gi|260099970|pdb|3HJI|A Chain A, 1.8 Angstrom Crystal Structure Of The I74v:i85v Variant Of
Vivid (Vvd).
gi|260099971|pdb|3HJI|B Chain B, 1.8 Angstrom Crystal Structure Of The I74v:i85v Variant Of
Vivid (Vvd)
Length = 154
Score = 90.1 bits (222), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPL 108
T + V+ D D P++Y ++ F TGY EVLGRNCRFLQ D P++ R++
Sbjct: 37 TSCALVLCDLKQKDTPVVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKY-- 94
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSE 168
VD ++ +R+ ++ E Q E++NFKK+G VN L + P+RD+ G + +G Q +E
Sbjct: 95 VDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCETE 154
>gi|378729746|gb|EHY56205.1| non-specific serine/threonine protein kinase [Exophiala
dermatitidis NIH/UT8656]
Length = 1002
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
F + D D PIIY + F FTGY D+V+GRNCRFLQ PR +R V+
Sbjct: 319 FCLTDPNQEDNPIIYASAEFYRFTGYGPDDVIGRNCRFLQ--GPRTKRES-------VAR 369
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+RR + EG LLN+++DG P +N L +AP+ DD G V + IG Q
Sbjct: 370 LRRSIVEGQGISETLLNYRRDGRPFINLLMIAPLHDDKGNVKYHIGAQ 417
>gi|170742982|ref|YP_001771637.1| histidine kinase [Methylobacterium sp. 4-46]
gi|168197256|gb|ACA19203.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium sp. 4-46]
Length = 544
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY E++GRNCRFLQ P DP
Sbjct: 44 TTRMPMIVTDPRQPDNPIIFANQAFRALTGYDPSELIGRNCRFLQ---------GPETDP 94
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
++E+RR ++E E E+LN++K+G+ N L ++P+ +D G + + G Q+
Sbjct: 95 QTIAEVRRAIKERREISTEILNYRKNGSSFWNALFVSPVYNDAGDLVYFFGSQL 148
>gi|389845791|ref|YP_006348030.1| bacterioopsin activator [Haloferax mediterranei ATCC 33500]
gi|448616589|ref|ZP_21665299.1| bacterio-opsin activator [Haloferax mediterranei ATCC 33500]
gi|388243097|gb|AFK18043.1| bacterioopsin activator [Haloferax mediterranei ATCC 33500]
gi|445751244|gb|EMA02681.1| bacterio-opsin activator [Haloferax mediterranei ATCC 33500]
Length = 667
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P +AD PD P++YVN+ FE TGY A+ LGRNCR+LQ PR
Sbjct: 142 PVGITIADCSLPDLPLVYVNEAFESLTGYSAEAALGRNCRYLQ--GPRTNLEQ------- 192
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+RR +E ELLN+++ G NR+ +AP+ DG VTH +G Q
Sbjct: 193 VAELRRAIEAEESASVELLNYRESGETFWNRVDVAPLSGPDGAVTHYVGFQ 243
>gi|448320230|ref|ZP_21509718.1| bacterio-opsin activator [Natronococcus amylolyticus DSM 10524]
gi|445606636|gb|ELY60540.1| bacterio-opsin activator [Natronococcus amylolyticus DSM 10524]
Length = 618
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++Y+N+ +E TGY ++V+GRNCR LQ D DP
Sbjct: 128 PVGITISDPNREDNPLVYINEAYEEITGYSYEDVVGRNCRLLQGEDS---------DPEA 178
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+RR + E EL+N++KDGT N + +AP+R+ DG TH +G Q
Sbjct: 179 IAEMRRGIGEERPVTVELVNYRKDGTAFWNEVTIAPVRNGDGETTHYVGFQ 229
>gi|193214461|ref|YP_001995660.1| PAS/PAC sensor protein [Chloroherpeton thalassium ATCC 35110]
gi|193087938|gb|ACF13213.1| putative PAS/PAC sensor protein [Chloroherpeton thalassium ATCC
35110]
Length = 190
Score = 89.7 bits (221), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T ++DA PD P+I+VN F TGY ++E+LG+NCRFLQ P +
Sbjct: 18 TSEGIAISDARQPDNPLIFVNNGFTEITGYNSEEILGKNCRFLQ---------GPETNKE 68
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR L G EL N KK+G NRL L PIRD++G +TH +GIQ
Sbjct: 69 ASQMIRESLGTGKHCVVELRNHKKNGEAFWNRLSLNPIRDENGEITHFVGIQ 120
>gi|322433264|ref|YP_004210485.1| PAS/PAC sensor signal transduction histidine kinase [Granulicella
tundricola MP5ACTX9]
gi|321165656|gb|ADW71358.1| PAS/PAC sensor signal transduction histidine kinase [Granulicella
tundricola MP5ACTX9]
Length = 519
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 66/115 (57%), Gaps = 9/115 (7%)
Query: 59 VADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIR 118
VA A PD PI+YVN FE TGY EV GRNCRFL+ +R P ++ +R
Sbjct: 166 VASATLPDLPIVYVNPAFEEMTGYSRAEVQGRNCRFLEGN----ERSQP-----ALAIVR 216
Query: 119 RCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
L+ + L NF+KDGTP N L L+PI DD+G +TH +GIQ +++L
Sbjct: 217 DALKNRRKGLAVLKNFRKDGTPFWNELSLSPIMDDEGQLTHYVGIQTDVTQRVEL 271
>gi|307103015|gb|EFN51280.1| hypothetical protein CHLNCDRAFT_141214 [Chlorella variabilis]
Length = 796
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 63/110 (57%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVVADA PD P+IY ++ F TGY +EVLG NCRFLQ DP V
Sbjct: 39 TFVVADATLPDCPLIYASEGFVHMTGYSMEEVLGHNCRFLQGEG---------TDPKDVK 89
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
++R + G LLN++KDGTP N L + PI+D+ G V +G+Q+
Sbjct: 90 KLRDAVRNGTPVCTRLLNYRKDGTPFWNLLTMTPIKDEMGRVIKFVGVQV 139
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
++FV+AD PD PI++ + F TGYR +EVLGRNCRFLQ RD D V
Sbjct: 218 SNFVIADPTLPDCPIVFASDPFLKLTGYRREEVLGRNCRFLQGRD---------TDRATV 268
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+E++ + G E +LN+ K G P N L +API+D + ++G+Q+
Sbjct: 269 NELKAAIRAGRECTVRMLNYTKAGKPFWNMLTVAPIKDIEERPRFLVGVQV 319
>gi|56750209|ref|YP_170910.1| two-component response regulator [Synechococcus elongatus PCC 6301]
gi|81300164|ref|YP_400372.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Synechococcus elongatus PCC 7942]
gi|56685168|dbj|BAD78390.1| two-component response regulator [Synechococcus elongatus PCC 6301]
gi|81169045|gb|ABB57385.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Synechococcus elongatus PCC 7942]
Length = 929
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 60/107 (56%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
V+ DA +PD P+IYVN FE TGY E+LGRNCR LQ + D + + EI
Sbjct: 384 VIVDAIEPDMPVIYVNPAFERITGYSEAEMLGRNCRILQGNER---------DSLQIEEI 434
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R L + + NF+KDG P N L ++PI + G VTH IG+Q
Sbjct: 435 HRGLSQAENVHVVIRNFRKDGQPFWNDLYISPIFNAQGNVTHFIGVQ 481
>gi|190613727|pdb|3D72|A Chain A, 1.65 Angstrom Crystal Structure Of The Cys71val Variant In
The Fungal Photoreceptor Vvd
gi|190613728|pdb|3D72|B Chain B, 1.65 Angstrom Crystal Structure Of The Cys71val Variant In
The Fungal Photoreceptor Vvd
Length = 149
Score = 89.7 bits (221), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPL 108
T + ++ D D PI+Y ++ F TGY EVLGRNCRFLQ D P++ R++
Sbjct: 34 TSVALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKY-- 91
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
VD ++ +R+ ++ E Q E++NFKK+G VN L + P+RD+ G + +G Q
Sbjct: 92 VDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQ 147
>gi|440718889|ref|ZP_20899327.1| signal transduction histidine kinase with CheB and CheR activity
[Rhodopirellula baltica SWK14]
gi|436435877|gb|ELP29686.1| signal transduction histidine kinase with CheB and CheR activity
[Rhodopirellula baltica SWK14]
Length = 1739
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
FV+ DA D PI+Y N+ F TG+ +E++GRNCRFLQ PL DP V
Sbjct: 993 FVIVDAQAKDTPIVYANQGFFNLTGFAPEEIVGRNCRFLQ---------GPLTDPSNVDM 1043
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR +++ E + LLN+++DG+ N L + PI+D G VTH +G+Q
Sbjct: 1044 IRDAIKKKKECRVTLLNYRRDGSQFHNDLIITPIQDSQGVVTHFVGVQ 1091
>gi|427730175|ref|YP_007076412.1| PAS domain-containing protein [Nostoc sp. PCC 7524]
gi|427366094|gb|AFY48815.1| PAS domain S-box [Nostoc sp. PCC 7524]
Length = 1712
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 66/112 (58%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T V+ADA + P+IYVN FE TGY A +V+G+NCRFLQ D D
Sbjct: 451 TNNGIVIADARLANNPVIYVNSAFEQITGYSATDVIGQNCRFLQSTD---------TDQP 501
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ ++R L+ G + Q L N++KDG+ N L ++PI D+ GT+TH +GIQ
Sbjct: 502 ALQKLRLALKSGKDCQLILRNYRKDGSLFWNELSISPIYDETGTLTHFLGIQ 553
>gi|240138254|ref|YP_002962726.1| sensory transduction histidine kinase [Methylobacterium extorquens
AM1]
gi|240008223|gb|ACS39449.1| sensory transduction histidine kinase [Methylobacterium extorquens
AM1]
Length = 492
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +V D PD PI++ N F TGY DE+LGRNCRFLQ P DP
Sbjct: 30 ATRMPMLVTDPNRPDNPIVFANAAFTKLTGYTRDEILGRNCRFLQ---------GPETDP 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V+ IR +E + + ELLN KKDG NRL ++P+ D DG +T+ Q
Sbjct: 81 YDVARIRDAIERRVPIEIELLNHKKDGEVFWNRLLVSPVFDRDGALTYFFASQF 134
>gi|399909367|ref|ZP_10777919.1| sensory box/FOG: EAL domain/GGDEF domain containing protein
[Halomonas sp. KM-1]
Length = 1157
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 9/106 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ DA D PI YVN+ F TGYR +EVLGRNCR LQ + +P V+
Sbjct: 608 IVITDASQHDLPISYVNEAFLALTGYREEEVLGRNCRMLQGVE---------TEPDAVAW 658
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIG 162
+RRC+ E + LLN++KDG+ N L ++P+ D DG VTH +G
Sbjct: 659 LRRCVVERRDCHVTLLNYRKDGSTFWNALYVSPVLDGDGGVTHFVG 704
>gi|358060659|dbj|GAA93655.1| hypothetical protein E5Q_00300 [Mixia osmundae IAM 14324]
Length = 1103
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR--DPRAQRRHPLVD 110
T SF+V DA DFPI++ ++ F TGY DE++GRNCRFLQ D + R D
Sbjct: 448 TSCSFLVVDARKYDFPIVFASETFSKLTGYETDEIIGRNCRFLQAPSGDVQMGSRRKYTD 507
Query: 111 PVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +R + G E Q ++N++K+G P +N + + PI D + + +G Q+
Sbjct: 508 SNAVYHMRTHVMAGKESQVSIINYRKNGQPFINLITIVPITWDTDEIAYFVGFQV 562
>gi|359461408|ref|ZP_09249971.1| PAS sensor diguanylate cyclase/phophodiesterase [Acaryochloris sp.
CCMEE 5410]
Length = 912
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +++DA P FPII+ + F FTGY DEV+G NCRFLQ P D
Sbjct: 125 TANDGIIISDATVPGFPIIFASSNFYEFTGYTPDEVIGHNCRFLQ---------GPKTDA 175
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V EIR L+ F+GE+LN+ K G P N LR+ P+R+ G V ++GIQ
Sbjct: 176 NTVDEIRLALKNYQPFEGEILNYCKTGQPFWNLLRIKPLRNAQGEVHFLVGIQ 228
>gi|375110486|ref|ZP_09756708.1| response regulator receiver modulated PAS/PAC sensor-containing
diguanylate cyclase/phosphodiesterase [Alishewanella
jeotgali KCTC 22429]
gi|374569430|gb|EHR40591.1| response regulator receiver modulated PAS/PAC sensor-containing
diguanylate cyclase/phosphodiesterase [Alishewanella
jeotgali KCTC 22429]
Length = 1590
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
V+AD PD P+ YVN FE TGY +DEV+G NC+FLQ + D + + +I
Sbjct: 910 VIADITWPDMPVTYVNYAFERLTGYSSDEVIGHNCKFLQGTER---------DELAIQQI 960
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R + E E L N++KDG+ N L LAP+ D+ G +TH IGIQ
Sbjct: 961 RNAIAERQECSVVLKNYRKDGSIFWNNLFLAPVPDEQGVITHYIGIQ 1007
>gi|251773125|gb|EES53679.1| diguanylate cyclase with PAS/PAC sensor [Leptospirillum
ferrodiazotrophum]
Length = 1354
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 23/136 (16%)
Query: 69 IIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQ 128
IIY N+ F TGYR DEV+GR+CR LQ D V EIR+ L+ G ++
Sbjct: 762 IIYTNEAFTTITGYRHDEVVGRDCRLLQGEGS---------DRETVDEIRQALDSGQSYR 812
Query: 129 GELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKENCNQQ 188
G++LN++KDG+ N L L+P+R+ +G +TH +G+ LN +S F+E Q
Sbjct: 813 GQILNYRKDGSTFWNLLTLSPVRNSEGAITHFVGV---------LNDISE--FRELLAQ- 860
Query: 189 YDQSAQYFSGGHSPLS 204
S FS H PL+
Sbjct: 861 --NSRLTFSVQHDPLT 874
>gi|168701427|ref|ZP_02733704.1| multi-sensor hybrid histidine kinase [Gemmata obscuriglobus UQM
2246]
Length = 1032
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 9/101 (8%)
Query: 65 PDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEG 124
PD PI Y + FE TGY E LGRNCRFLQ +D DP V+ +R + G
Sbjct: 533 PDNPITYASPGFEGVTGYPPREALGRNCRFLQGKDS---------DPAAVALVREAVRAG 583
Query: 125 IEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+ E+LN++KDGTP N L ++PIRDD G +TH +G+ +
Sbjct: 584 RDCAVEVLNYRKDGTPFWNALSVSPIRDDAGELTHFVGVLV 624
>gi|400603371|gb|EJP70969.1| hisactophilin C49S mutant/phototropin PHY3 fusion protein
[Beauveria bassiana ARSEF 2860]
Length = 833
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
F + D PD PI+++++ F T Y D V+GRNCRFLQ P +P V
Sbjct: 237 FCLTDPSRPDNPIVFMSEQFNRTTQYGVDYVIGRNCRFLQ---------GPCTNPFSVKR 287
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR LE GIE LN+++DGTP +N + LAP+ D G + + IG Q+
Sbjct: 288 IREKLEAGIEHYETFLNYRRDGTPFMNLVMLAPLYDSRGIIRYFIGAQV 336
>gi|296089783|emb|CBI39602.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 150/340 (44%), Gaps = 33/340 (9%)
Query: 286 TTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE 345
T + W V G R SAC + + +FGG + D VLNLD
Sbjct: 8 TAKKKAMWLYPKVLGFNPSERWGHSACYSHGLVYVFGGCCGGLH-FCDVLVLNLDTM--A 64
Query: 346 WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGA 405
W + PG + + G ++VFGG +ND+ +LDL +K+ T E GA
Sbjct: 65 WDTLVTTGQGPGPRDSHSAVILGQRMIVFGGTNGSKKVNDLHILDLGSKEWTRPECR-GA 123
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGV-LLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
PP PR H++ ++ KLV+ GG + L+D ++LDL T + E+ +P R
Sbjct: 124 PPSPRESHTATLVGDEKLVIFGGSGEGEANYLNDFHVLDLKTMRWTSPEVKGD-TPAPRD 182
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESY--TIDLGDEEP-QWKQLECNAFTGVGSQ 521
HS G K++++GG G+ Y ID+ D + W +L +
Sbjct: 183 SHSAVAIG-NKLIVYGG---------DCGDRYHGDIDILDMDTLTWSRLSVQGSS----- 227
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
P R H AVS+ ++ I GG + H + +++LD W L + GQ P+
Sbjct: 228 ----PGVRAGHAAVSIGT-KVYIIGG-VGDKHYYNDVWVLDVI--TCLWNQLEIRGQQPQ 279
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ H T +V + + + GG +E LNEL L L S+
Sbjct: 280 GRFSH-TAIVTDSDIAIYGGCGEDERPLNELLVLQLGSEH 318
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++ + W + +V+G+ R +A + G ++ + GG G + +D +V LD
Sbjct: 209 DILDMDTLTWSRLSVQGSSPGVRAGHAAVSIGTKVYIIGGVG-DKHYYNDVWV--LDVIT 265
Query: 344 PEWRRVSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ ++ P GR+ HT + + S + ++GGCG + LN++ VL L ++ P
Sbjct: 266 CLWNQLEIRGQQPQGRFSHT-AIVTDSDIAIYGGCGEDERPLNELLVLQLGSEHPN 320
>gi|27807563|dbj|BAC55266.1| phytochrome 3 [Hypolepis punctata]
Length = 657
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 10/112 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
TSFVV DA PD PII+ + F TGY + EV+G NCR LQ P +P V
Sbjct: 220 TSFVVVDALKPDLPIIFASTGFFNLTGYTSTEVIGANCRLLQ---------GPDTNPEDV 270
Query: 115 SEIRRCLEEGI-EFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+ IR L + F +LLN++KDG+ N L +API+DD G++ +IG+Q+
Sbjct: 271 ASIREALAQDTGTFCRKLLNYRKDGSSFWNLLTIAPIKDDRGSIVKLIGVQL 322
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ D P+ PII+ + F T Y +EVLG NC FLQ RD D V
Sbjct: 472 SFVITDPRLPNNPIIFASDQFLELTEYSREEVLGNNCSFLQGRD---------TDANTVQ 522
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR + E + +LLN+ + G P N L +RD+ G + + IG+Q
Sbjct: 523 LIRDAVAEQRDVTVQLLNYTRGGRPFWNLFHLHAMRDEKGELQYFIGVQ 571
>gi|300865640|ref|ZP_07110413.1| putative Histidine kinase [Oscillatoria sp. PCC 6506]
gi|300336367|emb|CBN55563.1| putative Histidine kinase [Oscillatoria sp. PCC 6506]
Length = 631
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
T V+ADA P+ IY N F TGY +E++G NCR LQ D DP +
Sbjct: 217 TGIVIADATTPNLANIYCNPAFAKMTGYSHEEIIGHNCRLLQGND---------TDPEAI 267
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
++IR L E L N++KDGT N+L ++P+RD G +TH IGIQ+
Sbjct: 268 NQIREALHNQTECTVVLKNYRKDGTTFWNQLAISPVRDRKGKLTHFIGIQM 318
>gi|303288491|ref|XP_003063534.1| phototropin, blue light receptor [Micromonas pusilla CCMP1545]
gi|226455366|gb|EEH52670.1| phototropin, blue light receptor [Micromonas pusilla CCMP1545]
Length = 819
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+F V+D PD PI+Y + F TGY A+EV+ RNCRFLQ D D V
Sbjct: 46 TFTVSDPTLPDCPIVYASDGFLKMTGYSAEEVINRNCRFLQGED---------TDRDDVQ 96
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR +++G L N+KKDGTP N L +AP++ +DGTV IG+Q+
Sbjct: 97 KIRDAVQKGERLTIRLQNYKKDGTPFWNLLTIAPVKMEDGTVAKFIGVQV 146
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SF+++D PD PI++ + F FTGY +E+LGRNCRFLQ D V
Sbjct: 231 SFLISDPSLPDCPIVFASDGFLDFTGYGREEILGRNCRFLQGAG---------TDRDAVK 281
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
EIR +++ E LLN+ K G P N LAP+RD G V G+Q+
Sbjct: 282 EIRNAIKDNRECTVRLLNYTKQGKPFWNMFTLAPVRDHAGEVRFFAGVQV 331
>gi|448579150|ref|ZP_21644427.1| bacterio-opsin activator [Haloferax larsenii JCM 13917]
gi|445723829|gb|ELZ75465.1| bacterio-opsin activator [Haloferax larsenii JCM 13917]
Length = 661
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D PD P++Y N FE TGY +E LGRNCR+LQ +R
Sbjct: 141 PVGITISDGSLPDHPLVYANDAFESMTGYTIEEALGRNCRYLQGDKTNQER--------- 191
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+RR ++ ELLN+++DG+ NR+ +AP+ DG+VTH +G Q
Sbjct: 192 VAELRRAIDAEESASVELLNYRRDGSTFWNRVDIAPLPGPDGSVTHYVGFQ 242
>gi|118025365|emb|CAJ13844.2| putative white-collar-1b protein [Mucor circinelloides]
Length = 697
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ--RRHPLVDPVV 113
SFVV DA DFP++Y + +FE TGY EV+GRNCRFLQ D R R D
Sbjct: 72 SFVVVDAKQYDFPLVYASPMFERLTGYAPSEVIGRNCRFLQAPDGRVAIGSRRKYTDNTT 131
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQI 165
V I+ + +G E Q ++N++K G P VN L + PI + + + IG+Q+
Sbjct: 132 VYHIKTHMVQGKESQSSIINYRKTGQPFVNLLTVIPIAWESSEDIDYFIGLQV 184
>gi|149243080|pdb|2PD7|A Chain A, 2.0 Angstrom Crystal Structure Of The Fungal Blue-Light
Photoreceptor Vivid
gi|149243081|pdb|2PD7|B Chain B, 2.0 Angstrom Crystal Structure Of The Fungal Blue-Light
Photoreceptor Vivid
gi|149243084|pdb|2PDR|A Chain A, 1.7 Angstrom Crystal Structure Of The Photo-excited Blue-
Light Photoreceptor Vivid
gi|149243085|pdb|2PDR|B Chain B, 1.7 Angstrom Crystal Structure Of The Photo-excited Blue-
Light Photoreceptor Vivid
gi|149243086|pdb|2PDR|C Chain C, 1.7 Angstrom Crystal Structure Of The Photo-excited Blue-
Light Photoreceptor Vivid
gi|149243087|pdb|2PDR|D Chain D, 1.7 Angstrom Crystal Structure Of The Photo-excited Blue-
Light Photoreceptor Vivid
gi|149243088|pdb|2PDT|A Chain A, 2.3 Angstrom Structure Of Phosphodiesterase Treated Vivid
gi|149243089|pdb|2PDT|B Chain B, 2.3 Angstrom Structure Of Phosphodiesterase Treated Vivid
gi|149243090|pdb|2PDT|C Chain C, 2.3 Angstrom Structure Of Phosphodiesterase Treated Vivid
gi|149243091|pdb|2PDT|D Chain D, 2.3 Angstrom Structure Of Phosphodiesterase Treated Vivid
Length = 149
Score = 89.4 bits (220), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPL 108
T + ++ D D PI+Y ++ F TGY EVLGRNCRFLQ D P++ R++
Sbjct: 34 TSCALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKY-- 91
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
VD ++ +R+ ++ E Q E++NFKK+G VN L + P+RD+ G + +G Q
Sbjct: 92 VDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQ 147
>gi|384248305|gb|EIE21789.1| hypothetical protein COCSUDRAFT_17195 [Coccomyxa subellipsoidea
C-169]
Length = 143
Score = 89.4 bits (220), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T +AD PD P+IY N+ F TGY E LG+NCRFLQ P D
Sbjct: 4 TKEGITIADCSQPDMPLIYANEAFARITGYSVAESLGKNCRFLQ---------GPGTDEA 54
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ E+RR +G +L+N++K+G VN L + PI D G +TH +GIQ
Sbjct: 55 PLEELRRATRQGQACVVQLMNYRKNGDAFVNYLSVTPIHDSAGVLTHYVGIQ 106
>gi|336317206|ref|ZP_08572073.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Rheinheimera sp. A13L]
gi|335878506|gb|EGM76438.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Rheinheimera sp. A13L]
Length = 1195
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 9/109 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
+ ++ D PD PI+YVN FE TGY + EVLG+NCR LQ +D R P +D
Sbjct: 500 NAIIITDNEAPDQPIVYVNPAFEQLTGYTSAEVLGKNCRLLQSQD----RHQPGLDS--- 552
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
IRR + + ELLN++KDG+ N L LAP+ +D G +H +GI
Sbjct: 553 --IRRAIRNNCKGNAELLNYRKDGSSFWNDLTLAPVVNDRGHTSHFVGI 599
>gi|448678692|ref|ZP_21689699.1| HTR-like protein [Haloarcula argentinensis DSM 12282]
gi|445772679|gb|EMA23724.1| HTR-like protein [Haloarcula argentinensis DSM 12282]
Length = 726
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P + D PD P+IY N + TGY E+LG+NCR LQ + DP
Sbjct: 281 PVGVTITDPNRPDNPLIYANDHYRELTGYSLPELLGKNCRILQGEN---------TDPEP 331
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V +R ++ G + EL N++KDGT NR+R+AP+RDDDGTV + +G Q
Sbjct: 332 VDALRDAIDAGEQVSVELRNYRKDGTEFWNRVRIAPVRDDDGTVVNYVGFQ 382
>gi|448304641|ref|ZP_21494577.1| bacterio-opsin activator [Natronorubrum sulfidifaciens JCM 14089]
gi|445590022|gb|ELY44243.1| bacterio-opsin activator [Natronorubrum sulfidifaciens JCM 14089]
Length = 638
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++YVN ++ TGY DEV+GRNCRFLQ D
Sbjct: 141 PVGITISDPDLEDNPLVYVNDAYQEMTGYSFDEVVGRNCRFLQGDDS---------SETA 191
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+ ++E EL N++KDGT N + +AP+RD DGTVTH +G Q
Sbjct: 192 IAEMAAAIDEERPVTVELENYRKDGTSFWNEVTIAPVRDADGTVTHYVGFQ 242
>gi|197724613|emb|CAQ76857.1| white collar one B [Phycomyces blakesleeanus]
Length = 737
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ--RRHPLVDPVV 113
SFVV DA D PI+Y + FE TGY EV+GRNCRFLQ D R R D
Sbjct: 137 SFVVVDAHQYDAPIVYASPTFEKLTGYTPSEVVGRNCRFLQAPDGRVALGSRRKYTDNTA 196
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V I+ + +G E Q L+N++K G P VN L + P+ + + + +G+Q+
Sbjct: 197 VCHIKTHISQGKESQASLINYRKTGQPFVNLLTVIPVAWESDEIDYFVGLQV 248
>gi|358390474|gb|EHK39879.1| blue light photoreceptor BLR1 [Trichoderma atroviride IMI 206040]
Length = 1020
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D + A + VD
Sbjct: 353 AFVVCDVTMNDCPIIYVSDNFQNLTGYSRHEIIGQNCRFLQAPDGKVEAGSKREFVDDGA 412
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++R ++EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 413 VFNLKRMIKEGREVQQSLINYRKGGKPFLNLLTMIPIPWDTDEIRYFIGFQI 464
>gi|307104345|gb|EFN52599.1| hypothetical protein CHLNCDRAFT_14999, partial [Chlorella
variabilis]
Length = 111
Score = 89.4 bits (220), Expect = 6e-15, Method: Composition-based stats.
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDP----RAQRRHPLVDPVV 113
V+AD PD P+IY N+ F TGY VLGRNCRFLQ +P A DP V
Sbjct: 2 VIADCSLPDMPLIYANEGFTRMTGYGRHAVLGRNCRFLQ--NPPAGTTANAAGAGTDPEV 59
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V+ +R + G+ +L+N+K++G P +N L L P+ D G +TH +G+Q+
Sbjct: 60 VAALRESIAAGLPCVVQLMNYKRNGDPFINYLSLNPVHDTGGRLTHYVGVQV 111
>gi|242345219|dbj|BAH80323.1| aureochrome2-like protein [Ochromonas danica]
Length = 360
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SF +++A PD P++Y + F TGY E+LGRNCRFLQ P DP V+
Sbjct: 154 SFCISNAISPDMPLVYASPGFLKLTGYEMHEILGRNCRFLQ---------GPRTDPTEVA 204
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++ R L EG ++ LLN++KDG N++ L+ ++D G ++GIQ
Sbjct: 205 KVSRALAEGRDYSTVLLNYRKDGRTFWNQILLSHVKDRAGRTFFVVGIQ 253
>gi|298708956|emb|CBJ30909.1| aureochrome 4 [Ectocarpus siliculosus]
Length = 285
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 73/138 (52%), Gaps = 19/138 (13%)
Query: 37 DDTELSLKPG-LLFYP---------TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADE 86
DD E + +P LL P T+ +F ++D PD PI+Y ++ F TGY
Sbjct: 120 DDEEETKEPNCLLLEPDFQLMQALMTSQQNFTISDPSMPDNPIVYASQGFLTLTGYTIQN 179
Query: 87 VLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLR 146
V+GRNCRFLQ P DP + IRR + EG + L+N+K DGTP N+
Sbjct: 180 VIGRNCRFLQ---------GPGTDPRAIDIIRRGVAEGRDTSVCLMNYKADGTPFWNQFF 230
Query: 147 LAPIRDDDGTVTHIIGIQ 164
+A +RDD G + + +G+Q
Sbjct: 231 VAALRDDTGKIVNFVGVQ 248
>gi|384501136|gb|EIE91627.1| hypothetical protein RO3G_16338 [Rhizopus delemar RA 99-880]
Length = 647
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ--RRHPLVDPVV 113
SF+V DA PD PI+Y + FE TGY A E++GRNCRFLQ D + R D
Sbjct: 88 SFLVTDARQPDCPIVYCSPTFEHLTGYGATEIVGRNCRFLQAPDGQVTCGSRRTYTDNQA 147
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++ + + E Q ++N++K G P VN + + PI D+ V +G+Q+
Sbjct: 148 VYHLKAQMLQNKEHQASIINYRKGGQPFVNLVTVIPITDESNEVAFFVGLQV 199
>gi|27807561|dbj|BAC55265.1| phytochrome 3 [Dryopteris filix-mas]
Length = 686
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 67/113 (59%), Gaps = 11/113 (9%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
TSFVV DA PD PII+ + F TGY + EV+G NCRFLQ P +P V
Sbjct: 230 TSFVVVDALKPDLPIIFASTGFFNLTGYTSREVIGGNCRFLQ---------GPDTNPEDV 280
Query: 115 SEIRRC-LEEGI-EFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+ IR + G F G LLN++KDG+ N L +API+DD GT+ ++G+Q+
Sbjct: 281 ASIRDAVVPRGTGTFCGRLLNYRKDGSNFWNLLTIAPIKDDTGTIVKLVGVQL 333
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ D PD PII+ + F T Y +EVLG NCRFLQ RD D V
Sbjct: 499 SFVITDPRLPDNPIIFASDQFLELTEYSREEVLGENCRFLQGRD---------TDLKAVQ 549
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR ++EG + +LLN+ + G P N L +RD G + + IG+Q
Sbjct: 550 LIRDAVKEGRDITVQLLNYTRGGRPFWNLFHLQAMRDKKGNLQYFIGVQ 598
>gi|17230662|ref|NP_487210.1| hypothetical protein alr3170 [Nostoc sp. PCC 7120]
gi|17132265|dbj|BAB74869.1| alr3170 [Nostoc sp. PCC 7120]
Length = 1021
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 54/282 (19%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T V+ DA PD PIIYVN+ FE TGY A EV+G+NCRFLQ + D
Sbjct: 210 TISNGIVLTDANQPDNPIIYVNQAFETMTGYSAGEVIGQNCRFLQTNE---------TDQ 260
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
+ E+R L E E + NF+KDGT N L +AP+ D +TH IG+Q
Sbjct: 261 PGLWELRSALREKKECHVIIKNFRKDGTEFWNELYIAPVFDSCEQLTHFIGVQ-----ND 315
Query: 172 DLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQ--------LSDEVLAHN 223
H+ + +QY + + S G L+Q+ + + Q +E+L +
Sbjct: 316 ITQHLQVLETLQQQKEQYRRIVETASEGIWLLNQNNETTFVNQQMATMLGYTIEEMLGAS 375
Query: 224 ILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNA---WG-----------REVTGAL 269
+ S + + + + RQ + +H K C++ W R TGAL
Sbjct: 376 LFSFMDAEGLDMAQDLLSQRRQGIQEKHKFKFRCKDGSDLWAIISCTPLFDEQRNYTGAL 435
Query: 270 ELMTK------------------KLGWGRLARELTTLEAVCW 293
++T + RL L +LEAV W
Sbjct: 436 GMLTNISDVYDELRLRKQAEASLQESKERLDGILNSLEAVIW 477
>gi|299473575|emb|CBN77970.1| aureochrome 3 [Ectocarpus siliculosus]
Length = 275
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 77/140 (55%), Gaps = 16/140 (11%)
Query: 37 DDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ 96
DD + SL L T +FV+ D PD PI++ ++ F TGY D+VLGRNCRFLQ
Sbjct: 119 DDPDYSLVKAL---QTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQ 175
Query: 97 YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGT 156
P DP V +IR+ +E+G++ L N++ DG N+ +A +RD +GT
Sbjct: 176 ---------GPDTDPKAVEKIRKAIEKGMDTSVCLRNYRVDGAMFWNQFFIAALRDSEGT 226
Query: 157 VTHIIGIQIFSEAKIDLNHV 176
V + +G+Q K+D + V
Sbjct: 227 VINYVGVQ----CKVDEDFV 242
>gi|311692312|dbj|BAJ24887.1| LOV/LOV protein 1 [Physcomitrella patens]
Length = 435
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
S +++D PD PI++ + VF TGY +EV+GRNCRFLQ P DP V
Sbjct: 289 SLILSDPNLPDTPIVHASDVFCELTGYSREEVVGRNCRFLQ---------GPDTDPEAVR 339
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI-FSEAKI 171
EIR ++ + +LN+KKD TP N L +AP+R G V + +G+Q+ SEA +
Sbjct: 340 EIREAIKAERPYTVRILNYKKDNTPFWNHLHVAPVRSATGGVAYFVGVQLNVSEADV 396
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++D PD PI++ ++ F + Y DEV+GRNCRFLQ P D V
Sbjct: 66 NFVLSDPRLPDHPIVFASEGFLRMSRYERDEVVGRNCRFLQ---------GPDTDRRTVV 116
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
EIR + E Q +LN+ K P N +API DG V H +G+Q
Sbjct: 117 EIRDAIREERACQVLILNYTKYKEPFWNLFHMAPIFSSDGQVIHYVGVQ 165
>gi|188580069|ref|YP_001923514.1| signal transduction histidine kinase [Methylobacterium populi
BJ001]
gi|179343567|gb|ACB78979.1| signal transduction histidine kinase [Methylobacterium populi
BJ001]
Length = 488
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T ++ D + PD PII+VN F TGY +E+LGRNCRFLQ P DP
Sbjct: 30 ATRMPMLITDPYGPDNPIIFVNHAFTKLTGYSREEILGRNCRFLQ---------GPETDP 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V IR +E + + ELLN KK+G NRL ++P+ DD+G +T+ Q
Sbjct: 81 RDVGRIRDAIERRVPIEIELLNHKKNGEVFWNRLLISPVFDDEGRLTYFFASQF 134
>gi|448331268|ref|ZP_21520534.1| HTR-like protein [Natrinema versiforme JCM 10478]
gi|445609551|gb|ELY63349.1| HTR-like protein [Natrinema versiforme JCM 10478]
Length = 717
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 11/127 (8%)
Query: 38 DTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQY 97
+TELS++ + P ++ + D PIIY N F TGY DEVLGRNCRFLQ
Sbjct: 264 ETELSMRERAM--NEAPVGIILTNPHAEDNPIIYANDEFTDLTGYEKDEVLGRNCRFLQ- 320
Query: 98 RDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
R P V+E+R +E+ EL N++ DGT NR+R+AP+ DD+G +
Sbjct: 321 --GEQTREEP------VAELRNAVEKRESVTVELRNYRADGTEFWNRVRIAPLFDDNGDI 372
Query: 158 THIIGIQ 164
+ +G Q
Sbjct: 373 EYFVGFQ 379
>gi|359487672|ref|XP_002277646.2| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA-binding domain-containing
protein 4 [Vitis vinifera]
Length = 637
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 150/340 (44%), Gaps = 33/340 (9%)
Query: 286 TTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE 345
T + W V G R SAC + + +FGG + D VLNLD
Sbjct: 8 TAKKKAMWLYPKVLGFNPSERWGHSACYSHGLVYVFGGCCGGLH-FCDVLVLNLDTM--A 64
Query: 346 WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGA 405
W + PG + + G ++VFGG +ND+ +LDL +K+ T E GA
Sbjct: 65 WDTLVTTGQGPGPRDSHSAVILGQRMIVFGGTNGSKKVNDLHILDLGSKEWTRPECR-GA 123
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGV-LLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
PP PR H++ ++ KLV+ GG + L+D ++LDL T + E+ +P R
Sbjct: 124 PPSPRESHTATLVGDEKLVIFGGSGEGEANYLNDFHVLDLKTMRWTSPEVKGD-TPAPRD 182
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESY--TIDLGDEEP-QWKQLECNAFTGVGSQ 521
HS G K++++GG G+ Y ID+ D + W +L +
Sbjct: 183 SHSAVAIG-NKLIVYGG---------DCGDRYHGDIDILDMDTLTWSRLSVQGSS----- 227
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
P R H AVS+ ++ I GG + H + +++LD W L + GQ P+
Sbjct: 228 ----PGVRAGHAAVSIGT-KVYIIGG-VGDKHYYNDVWVLDVI--TCLWNQLEIRGQQPQ 279
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ H T +V + + + GG +E LNEL L L S+
Sbjct: 280 GRFSH-TAIVTDSDIAIYGGCGEDERPLNELLVLQLGSEH 318
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++ + W + +V+G+ R +A + G ++ + GG G + +D +V LD
Sbjct: 209 DILDMDTLTWSRLSVQGSSPGVRAGHAAVSIGTKVYIIGGVG-DKHYYNDVWV--LDVIT 265
Query: 344 PEWRRVSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ ++ P GR+ HT + + S + ++GGCG + LN++ VL L ++ P
Sbjct: 266 CLWNQLEIRGQQPQGRFSHT-AIVTDSDIAIYGGCGEDERPLNELLVLQLGSEHPN 320
>gi|158334589|ref|YP_001515761.1| PAS sensor diguanylate cyclase/phophodiesterase [Acaryochloris
marina MBIC11017]
gi|158304830|gb|ABW26447.1| PAS sensor diguanylate cyclase/phophodiesterase, putative
[Acaryochloris marina MBIC11017]
Length = 935
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T V++DA P FP+I+ + F FTGY DEV+G +C FLQ P DP
Sbjct: 148 TANDGIVISDATVPGFPVIFASPSFYQFTGYTPDEVIGNSCHFLQ---------GPKTDP 198
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V EIR+ L+ F+GE+LN++K G P N LR+ P+ + G V ++GIQ
Sbjct: 199 NTVDEIRQALKNDQTFEGEILNYRKMGQPFWNLLRIKPLTNAQGEVHFLVGIQ 251
>gi|452207021|ref|YP_007487143.1| sensor box histidine kinase [Natronomonas moolapensis 8.8.11]
gi|452083121|emb|CCQ36406.1| sensor box histidine kinase [Natronomonas moolapensis 8.8.11]
Length = 723
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+ADA +PD P++Y+N FE TGY E LGRNCRFLQ D V
Sbjct: 271 ITIADADEPDLPLVYINDSFEAITGYGPAESLGRNCRFLQGEG---------TDQRTVDR 321
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHV 176
+R LE E+LN++ DG P N L++ P+ D DG VTH +G Q + +
Sbjct: 322 VRAALEAEEPVSVEILNYRADGEPFWNDLKIVPVTDGDGEVTHFLGFQ---------DDI 372
Query: 177 SYPVFKENCNQQYDQSAQ 194
+ +E +QY+Q Q
Sbjct: 373 TERRQREIDLEQYEQVMQ 390
>gi|397642952|gb|EJK75561.1| hypothetical protein THAOC_02710 [Thalassiosira oceanica]
Length = 406
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+F ++D PD PI+YV++ F TGY D+VLGRNCRFLQ P D V
Sbjct: 285 NFAISDPSLPDNPIVYVSQGFLDLTGYSLDQVLGRNCRFLQ---------GPGTDQAAVD 335
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNH 175
IRR + EG + LLN+K DGTP N+ +A +RD + V + +G+Q + H
Sbjct: 336 VIRRGVMEGTDTSVCLLNYKADGTPFWNQFFVAALRDAENNVVNFVGVQCEVSKAVVEKH 395
Query: 176 VS 177
+S
Sbjct: 396 IS 397
>gi|219850592|ref|YP_002465025.1| multi-sensor hybrid histidine kinase [Chloroflexus aggregans DSM
9485]
gi|219544851|gb|ACL26589.1| multi-sensor hybrid histidine kinase [Chloroflexus aggregans DSM
9485]
Length = 913
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 10/115 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+V DA D PI++VN+ F TGY +EVLGRNCRFLQ P D V+
Sbjct: 51 MIVTDA-GADQPIVFVNRAFSTITGYAPNEVLGRNCRFLQ---------GPQTDAATVAR 100
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
+R + Q +LN++KDG P N+L ++P+RD+ G V +G+Q A++
Sbjct: 101 LREAIAAARPIQERILNYRKDGQPFWNQLSISPVRDETGNVVAFVGVQTDVTAQV 155
>gi|448607643|ref|ZP_21659596.1| HTR-like protein [Haloferax sulfurifontis ATCC BAA-897]
gi|445737580|gb|ELZ89112.1| HTR-like protein [Haloferax sulfurifontis ATCC BAA-897]
Length = 369
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 65 PDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEG 124
PD P++Y+N+ FE TGY A+ V GRNCRFL P DP V+EIR +E G
Sbjct: 268 PDDPVVYLNEAFETLTGYDAESVTGRNCRFLY---------GPETDPEAVAEIRAAVEAG 318
Query: 125 IEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
E+ + DG P NRL + PIRDDDG V +G
Sbjct: 319 ELISTEIRTYDADGEPFRNRLDVRPIRDDDGAVEFFVGFH 358
>gi|393723750|ref|ZP_10343677.1| PAS sensor protein [Sphingomonas sp. PAMC 26605]
Length = 368
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 9/124 (7%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T V+ D PD PI++ N F+ TGY +E++GRNCRFLQ P DP
Sbjct: 30 TRMPMVITDPAQPDNPIVFCNVAFQRLTGYAREEIIGRNCRFLQ---------GPDTDPA 80
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
++EIR +E G +LLN++KDGT N L L+P+RD +G V Q+ +I+
Sbjct: 81 RIAEIREGIEAGHAVDVDLLNYRKDGTTFWNALYLSPVRDREGVVRFFFASQLDVTDRIE 140
Query: 173 LNHV 176
++
Sbjct: 141 AQNI 144
>gi|332672276|ref|YP_004455284.1| putative PAS/PAC sensor protein [Cellulomonas fimi ATCC 484]
gi|332341314|gb|AEE47897.1| putative PAS/PAC sensor protein [Cellulomonas fimi ATCC 484]
Length = 594
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 14/150 (9%)
Query: 59 VADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIR 118
V D PD PI++VN FE TG+RA EV+GRNCRFLQ D + +R
Sbjct: 64 VTDPTQPDDPIVWVNTAFERLTGHRASEVVGRNCRFLQGTG---------TDLAAIGALR 114
Query: 119 RCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSY 178
L+EG ++LN+++DGTP NRL +A +RD G V +G+ ++D
Sbjct: 115 TALDEGRPATAQVLNYRRDGTPFWNRLVVAQVRDGAGGVVRRVGVLTDVTDEVDAQR--- 171
Query: 179 PVFKENCNQQYDQSAQYFSGGHSPLSQHQD 208
F++ Q + L+ H D
Sbjct: 172 --FRDTLGDQTTARLDLLARVSDELAPHLD 199
>gi|158853253|dbj|BAF91488.1| aureochrome1 [Vaucheria frigida]
Length = 348
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ DA PD PI+Y ++ F TGY D++LGRNCRFLQ P DP V
Sbjct: 218 NFVITDASLPDNPIVYASRGFLTLTGYSLDQILGRNCRFLQ---------GPETDPRAVD 268
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+IR + +G++ LLN+++DGT N +A +RD G + + +G+Q
Sbjct: 269 KIRNAITKGVDTSVCLLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQ 317
>gi|376003286|ref|ZP_09781099.1| Response regulator receiver modulated diguanylate cyclase
[Arthrospira sp. PCC 8005]
gi|375328316|emb|CCE16852.1| Response regulator receiver modulated diguanylate cyclase
[Arthrospira sp. PCC 8005]
Length = 452
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T V+ D PD PIIYVN +E TGY A+EV+G NCRFLQ QR P +D
Sbjct: 175 ATQNGVVITDPNQPDNPIIYVNAGWERLTGYAANEVIGSNCRFLQVN----QRDQPALD- 229
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+IRR + E E + L N+++DGT N L ++P+R++ G +T+ IGIQ
Sbjct: 230 ----DIRRAIAEAEECRVILKNYRRDGTIFWNELFISPVRNEPGELTNFIGIQ 278
>gi|333944373|pdb|3P7N|A Chain A, Crystal Structure Of Light Activated Transcription Factor
El222 From Erythrobacter Litoralis
gi|333944374|pdb|3P7N|B Chain B, Crystal Structure Of Light Activated Transcription Factor
El222 From Erythrobacter Litoralis
Length = 258
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 76/146 (52%), Gaps = 13/146 (8%)
Query: 24 QKCSFEGGGGGGGDDTELSLKPG----LLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIF 79
Q +G G G DDT + ++P L +P + VV+D D P+I +N+ F
Sbjct: 39 QDRPIDGSGAPGADDTRVEVQPPAQWVLDLIEASPIASVVSDPRLADNPLIAINQAFTDL 98
Query: 80 TGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGT 139
TGY +E +GRNCRFL +P + +IR+ + E E+LN+KKDGT
Sbjct: 99 TGYSEEECVGRNCRFLAGSG---------TEPWLTDKIRQGVREHKPVLVEILNYKKDGT 149
Query: 140 PLVNRLRLAPIRDDDGTVTHIIGIQI 165
P N + +API DDD + + +G Q+
Sbjct: 150 PFRNAVLVAPIYDDDDELLYFLGSQV 175
>gi|161367346|gb|ABX71079.1| putative phototropin [synthetic construct]
Length = 115
Score = 88.6 bits (218), Expect = 8e-15, Method: Composition-based stats.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+F V DA PD PI+Y + F TGY A EV+G NCRFLQ V
Sbjct: 6 TFTVCDATKPDCPIVYASDGFLRMTGYAAAEVIGYNCRFLQGEKTNKND---------VR 56
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
E+R ++ G + LLN+KKDGTP N L +AP++ DGTV IG+Q
Sbjct: 57 ELREAIKNGDRWSVRLLNYKKDGTPFWNYLVVAPVKLADGTVVKYIGVQ 105
>gi|73760086|dbj|BAE20161.1| phototropin [Mougeotia scalaris]
gi|73760096|dbj|BAE20166.1| phototropin [Mougeotia scalaris]
Length = 803
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 13/121 (10%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++DA PD PI++ ++ F TGY +EV+G NCRFLQ V+
Sbjct: 35 TFVISDATKPDIPIVFASEGFYEMTGYGPEEVIGYNCRFLQGEGTSRDE---------VT 85
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI----FSEAKI 171
+++CL EG F G LLN++KDGTP N L ++P+R G V IG+Q F+E
Sbjct: 86 RLKQCLVEGQPFCGRLLNYRKDGTPFWNLLTVSPVRSATGKVVKFIGMQTEVSKFTEGAA 145
Query: 172 D 172
D
Sbjct: 146 D 146
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D P+ PII+ + F T Y +EV+GRNCRFLQ P D V
Sbjct: 265 NFVITDPRLPENPIIFASDDFLELTEYSREEVIGRNCRFLQ---------GPDTDQDTVQ 315
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID--L 173
+IR + + + +LLN+ K G P N L +++ G + + IG+Q+ + I+ L
Sbjct: 316 KIRDAIRDCRDVTVQLLNYTKSGKPFWNMFHLQAVKNSKGELQYFIGVQLDASTYIEPKL 375
Query: 174 NHVSYPVFKENCNQ 187
+S KE Q
Sbjct: 376 QPLSESAEKEGTKQ 389
>gi|21231858|ref|NP_637775.1| histidine kinase [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66768015|ref|YP_242777.1| histidine kinase [Xanthomonas campestris pv. campestris str. 8004]
gi|21113578|gb|AAM41699.1| sensor histidine kinase [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66573347|gb|AAY48757.1| sensor histidine kinase [Xanthomonas campestris pv. campestris str.
8004]
Length = 540
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D + PD PI++ N+ F TGY ADE++G NCRFLQ P D
Sbjct: 36 TTRMPMTVTDPYLPDNPIVFANRAFLEMTGYAADEIIGNNCRFLQ---------GPETDR 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V+++R ++ EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 87 QAVADVREAIDNRREFATEVLNYRKDGSTFWNALFVSPVFDDTGKLVYFFGSQL 140
>gi|224008813|ref|XP_002293365.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970765|gb|EED89101.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 113
Score = 88.6 bits (218), Expect = 9e-15, Method: Composition-based stats.
Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+F ++D PD PI+YV++ F TGY D+VLGRNCRFLQ P D V
Sbjct: 10 NFAISDPSLPDNPIVYVSQGFLDLTGYTLDQVLGRNCRFLQ---------GPGTDQAAVD 60
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR+ + EG++ LLN+K DGTP N+ +A +RD + V + +G+Q
Sbjct: 61 VIRKGVREGVDTSVCLLNYKADGTPFWNQFFVAALRDAENNVVNFVGVQ 109
>gi|423067020|ref|ZP_17055810.1| putative Regulatory components of sensory transduction system
[Arthrospira platensis C1]
gi|406711306|gb|EKD06507.1| putative Regulatory components of sensory transduction system
[Arthrospira platensis C1]
Length = 452
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T V+ D PD PIIYVN +E TGY A+EV+G NCRFLQ QR P +D
Sbjct: 175 ATQNGVVITDPNQPDNPIIYVNAGWERLTGYAANEVIGSNCRFLQVN----QRDQPALD- 229
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+IRR + E E + L N+++DGT N L ++P+R++ G +T+ IGIQ
Sbjct: 230 ----DIRRAIAEAEECRVILKNYRRDGTIFWNELFISPVRNEPGELTNFIGIQ 278
>gi|307109021|gb|EFN57260.1| hypothetical protein CHLNCDRAFT_6687, partial [Chlorella
variabilis]
Length = 730
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 12/137 (8%)
Query: 32 GGGGGDDTELSLKPGLLFYPTTP---TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVL 88
GG GG++ + L T T+FV++D PD PI++ + F TGY +++L
Sbjct: 186 GGAGGEEEACPHRAALDLATTIERIQTNFVISDPSLPDCPIVFASDSFLQLTGYAREDIL 245
Query: 89 GRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLA 148
GRNCRFLQ P D V+E+R + G E +LN+ K G P N L +A
Sbjct: 246 GRNCRFLQ---------GPGTDRATVNELRAAILAGRECTVRMLNYTKAGKPFWNLLTVA 296
Query: 149 PIRDDDGTVTHIIGIQI 165
PIRD G + I+GIQ+
Sbjct: 297 PIRDGLGVLRFIVGIQV 313
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRN-CRFLQYRDPRAQRRHPLVDPVVV 114
+FVVADA PD P+IY ++ F TGY +E++G+N FLQ P DP V
Sbjct: 18 TFVVADATHPDCPLIYASEGFYHMTGYSQEELVGKNWYSFLQ---------GPDTDPQAV 68
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
++ +E G LL ++K G N L + PI DD+G V I+G+Q+
Sbjct: 69 RQLDEAVEAGRPLTLRLLCYRKSGKAFWNMLTMTPIHDDEGNVVKIVGVQV 119
>gi|319954539|ref|YP_004165806.1| pas/pac sensor signal transduction histidine kinase [Cellulophaga
algicola DSM 14237]
gi|319423199|gb|ADV50308.1| PAS/PAC sensor signal transduction histidine kinase [Cellulophaga
algicola DSM 14237]
Length = 628
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 60/107 (56%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
V++DA PD PIIY N F TGY +E +G+NCRFLQ D + ++ +
Sbjct: 147 VISDALKPDNPIIYCNTSFLTLTGYSEEETIGKNCRFLQGNDKNQE---------CITNM 197
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R ++ G Q + N+KKDGT N L + PIRD G +T+ IGIQ
Sbjct: 198 RNAIKNGKSSQAIVRNYKKDGTLFYNDLYITPIRDKSGLITNYIGIQ 244
>gi|168702150|ref|ZP_02734427.1| multi-sensor hybrid histidine kinase [Gemmata obscuriglobus UQM
2246]
Length = 997
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 117/274 (42%), Gaps = 62/274 (22%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ DA P PI++V+ FE TGY A E LGRNCRFLQ +D DP V
Sbjct: 511 IVITDARRPGHPIVFVSPGFERLTGYSAAEALGRNCRFLQGKD---------TDPAAVDR 561
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHV 176
+R L + ELLN++KDGT N L L+P+RD VT +G+ L V
Sbjct: 562 LRDALRDERACTVELLNYRKDGTAFWNELSLSPVRDGGDRVTQFVGV---------LTDV 612
Query: 177 SYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASI 236
+ + +Q+ Q+ + + G D +L + N S LT
Sbjct: 613 TQ---RRALEEQFRQAQKMEAIGQLAGGIAHDFNNLLTVI------NGFSELT------- 656
Query: 237 GSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKF 296
+RQL ++ + +V E+ A E T RL R+L T F
Sbjct: 657 ------LRQLPTDDPCQPLVT------EIRDAGERAT------RLTRKLLT--------F 690
Query: 297 TVRGAVEPSRCNFSACAAGNRLVL--FGGEGVNM 328
+ + VEP + +A G R +L GEGV +
Sbjct: 691 SRKEVVEPVVLDLNATVDGARGMLRWLLGEGVRL 724
>gi|85373778|ref|YP_457840.1| sensor histidine kinase [Erythrobacter litoralis HTCC2594]
gi|84786861|gb|ABC63043.1| sensor histidine kinase [Erythrobacter litoralis HTCC2594]
Length = 225
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 76/146 (52%), Gaps = 13/146 (8%)
Query: 24 QKCSFEGGGGGGGDDTELSLKPG----LLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIF 79
Q +G G G DDT + ++P L +P + VV+D D P+I +N+ F
Sbjct: 6 QDRPIDGSGAPGADDTRVEVQPPAQWVLDLIEASPIASVVSDPRLADNPLIAINQAFTDL 65
Query: 80 TGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGT 139
TGY +E +GRNCRFL +P + +IR+ + E E+LN+KKDGT
Sbjct: 66 TGYSEEECVGRNCRFLAGSG---------TEPWLTDKIRQGVREHKPVLVEILNYKKDGT 116
Query: 140 PLVNRLRLAPIRDDDGTVTHIIGIQI 165
P N + +API DDD + + +G Q+
Sbjct: 117 PFRNAVLVAPIYDDDDELLYFLGSQV 142
>gi|226374632|gb|ACO52468.1| neochrome [Allantodia dilatata]
Length = 1425
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 11/113 (9%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
TSFVV DA PD PII+ + F TG + EV+G NCRFLQ P DP +
Sbjct: 658 TSFVVVDALKPDLPIIFASTGFFNLTGCTSREVIGGNCRFLQ---------GPDTDPEDI 708
Query: 115 SEIRRC-LEEGI-EFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+ IR + +G F G LLN++KDG+ N L +API+DD GT+ IG+Q+
Sbjct: 709 ASIRDAVVPQGTGTFCGRLLNYRKDGSNFWNLLTIAPIKDDSGTIVKFIGVQL 761
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ D PD PII+ + F T Y ++VLG NCRFLQ RD D V
Sbjct: 927 SFVITDPRLPDNPIIFASDQFLELTEYSREDVLGENCRFLQGRD---------TDRKAVQ 977
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR ++EG + +LLN+ + P N L +RD G + + IG+Q
Sbjct: 978 LIRDAVKEGRDVTVQLLNYTRSRRPFWNLFHLQAMRDKKGNLQYFIGVQ 1026
>gi|42760033|emb|CAE01390.1| tuber borchii white collar-1 [Tuber borchii]
gi|42760035|emb|CAE01396.1| tuber borchii white collar-1 [Tuber borchii]
Length = 956
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 81/172 (47%), Gaps = 12/172 (6%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPLVDP 111
SFVV DA D PI+Y + FE TGY E+LGRNCRFLQ D P +R++ VD
Sbjct: 298 SFVVTDARKFDNPIVYCSATFERLTGYTKHEILGRNCRFLQAPDAKIVPGVKRKY--VDD 355
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI----FS 167
V ++ ++ E Q L+N++K G P N L + PI D V + +G Q+
Sbjct: 356 DAVYYLKNQIQAKKEAQTSLINYRKGGQPFTNLLTMIPITWDSPEVVYFVGFQVDLVEQP 415
Query: 168 EAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEV 219
A ++ N S F N QY Q Y + L G+ D+V
Sbjct: 416 GAMVNRNKGSDGSFA--INYQYSQLPTYVPAAAAALVMDPARSGLTVARDDV 465
>gi|383875527|pdb|3ULF|A Chain A, The Light State Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
gi|383875528|pdb|3ULF|B Chain B, The Light State Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
gi|383875529|pdb|3ULF|C Chain C, The Light State Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
gi|383875530|pdb|3ULF|D Chain D, The Light State Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
gi|383875531|pdb|3ULF|E Chain E, The Light State Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
gi|383875532|pdb|3ULF|F Chain F, The Light State Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
Length = 170
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ DA PD PI+Y ++ F TGY D++LGRNCRFLQ P DP V
Sbjct: 51 NFVITDASLPDNPIVYASRGFLTLTGYSLDQILGRNCRFLQ---------GPETDPRAVD 101
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+IR + +G++ LLN+++DGT N +A +RD G + + +G+Q
Sbjct: 102 KIRNAITKGVDTSVCLLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQ 150
>gi|444310002|ref|ZP_21145630.1| signal transduction histidine kinase [Ochrobactrum intermedium M86]
gi|443486649|gb|ELT49423.1| signal transduction histidine kinase [Ochrobactrum intermedium M86]
Length = 491
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
TP ++ + PD PI++ NK F+ TGY ADE++G+NCRFLQ P DP
Sbjct: 30 TPMPMLITNPRLPDNPIVFANKAFQNLTGYEADEIIGKNCRFLQ---------GPGTDPK 80
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V IR +E ++LN+KK G P NRL ++P++ + G + H + Q+
Sbjct: 81 HVEMIRAAIETEQSIDIDILNYKKSGEPFWNRLHISPVKTEAGELHHFVSSQL 133
>gi|409992366|ref|ZP_11275561.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
[Arthrospira platensis str. Paraca]
gi|409936779|gb|EKN78248.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
[Arthrospira platensis str. Paraca]
Length = 1276
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
++ DA D D +I+ N FE TGY +V+GRNCRFLQ +D DP ++E
Sbjct: 346 IIITDATDSDNRVIFANSGFEKITGYSRHQVIGRNCRFLQGKDS---------DPKALAE 396
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R +E+G E EL N++ DG+ N L ++P+ + G +TH IGIQ
Sbjct: 397 LRNAIEQGRECNIELQNYRPDGSSFWNELSISPVYNSQGFLTHFIGIQ 444
>gi|302407808|ref|XP_003001739.1| vivid PAS protein VVD [Verticillium albo-atrum VaMs.102]
gi|261359460|gb|EEY21888.1| vivid PAS protein VVD [Verticillium albo-atrum VaMs.102]
Length = 211
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP--LVDPV 112
+ V+ D PD PI+Y ++ F TGY E+LGRNCRFLQ + R P VD
Sbjct: 95 VALVLCDLAQPDCPIVYASEAFTFLTGYSNAEILGRNCRFLQAPGGKVSRSSPRKYVDDR 154
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+V ++R+ +E+ E Q E+ NF+KDG+P +N L + P+ D + +G Q+
Sbjct: 155 MVKQMRKAVEKNDEVQLEVQNFRKDGSPFMNILTMIPVTWDSEDYRYSVGFQV 207
>gi|300863837|ref|ZP_07108762.1| putative Histidine kinase [Oscillatoria sp. PCC 6506]
gi|300338185|emb|CBN53908.1| putative Histidine kinase [Oscillatoria sp. PCC 6506]
Length = 1432
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ D PD PIIY N FE TGY EV+GRNCRFLQ D +++ +
Sbjct: 490 IVITDNTQPDNPIIYCNAAFEKMTGYSRSEVIGRNCRFLQSTDAESEKAR--------QK 541
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR L E L N++KDGT N L ++P+RD G +TH +G+Q
Sbjct: 542 IREALRLEQECHVILKNYRKDGTYFWNELAISPVRDSRGRLTHFVGVQ 589
>gi|239833953|ref|ZP_04682281.1| PAS domain S-box-containing protein [Ochrobactrum intermedium LMG
3301]
gi|239822016|gb|EEQ93585.1| PAS domain S-box-containing protein [Ochrobactrum intermedium LMG
3301]
Length = 495
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
TP ++ + PD PI++ NK F+ TGY ADE++G+NCRFLQ P DP
Sbjct: 34 TPMPMLITNPRLPDNPIVFANKAFQNLTGYEADEIIGKNCRFLQ---------GPGTDPK 84
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V IR +E ++LN+KK G P NRL ++P++ + G + H + Q+
Sbjct: 85 HVEMIRAAIETEQSIDIDILNYKKSGEPFWNRLHISPVKTEAGELHHFVSSQL 137
>gi|291566948|dbj|BAI89220.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 1276
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
++ DA D D +I+ N FE TGY +V+GRNCRFLQ +D DP ++E
Sbjct: 346 IIITDATDSDNRVIFANSGFEKITGYSRHQVIGRNCRFLQGKDS---------DPKALAE 396
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R +E+G E EL N++ DG+ N L ++P+ + G +TH IGIQ
Sbjct: 397 LRNAIEQGRECNIELQNYRPDGSSFWNELSISPVYNSQGFLTHFIGIQ 444
>gi|449135813|ref|ZP_21771246.1| signal transduction histidine kinase with CheB and CheR activity
[Rhodopirellula europaea 6C]
gi|448885516|gb|EMB15954.1| signal transduction histidine kinase with CheB and CheR activity
[Rhodopirellula europaea 6C]
Length = 1739
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
FV+ DA D PI+Y N+ F TG+ +E++GRNCRFLQ P DP V
Sbjct: 993 FVIVDAQAKDTPIVYANQGFFNLTGFAPEEIVGRNCRFLQ---------GPQTDPSNVDM 1043
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR +++ E + LLN+++DG+ N L + PI+D G VTH +G+Q
Sbjct: 1044 IRDAIQKKQECRVTLLNYRRDGSQFYNDLIITPIQDSQGVVTHFVGVQ 1091
>gi|186686857|ref|YP_001870050.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Nostoc punctiforme PCC 73102]
gi|186469209|gb|ACC85009.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Nostoc punctiforme PCC 73102]
Length = 1043
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
++ D PD PIIYVN FE+ TGY A EV+GRNCRFLQ D ++ V + E
Sbjct: 241 IILTDPNQPDNPIIYVNPAFELITGYCASEVIGRNCRFLQGND---------LEQVALQE 291
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R ++E E L N++KD N L LAP+ D+ G +T+ IGIQ
Sbjct: 292 LRSAIQEQRECHVILRNYRKDNFLFWNELYLAPVFDNSGYLTNFIGIQ 339
>gi|296533497|ref|ZP_06896072.1| sensor histidine kinase/response regulator [Roseomonas cervicalis
ATCC 49957]
gi|296266172|gb|EFH12222.1| sensor histidine kinase/response regulator [Roseomonas cervicalis
ATCC 49957]
Length = 537
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +VADA PD PI++ N F TGY DE++G NCRFLQ P D
Sbjct: 33 TTRMPMIVADARAPDMPIVFANHAFLQMTGYTQDEIVGTNCRFLQ---------GPETDR 83
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+ +R+ L E E E+LN++K+G+ N L ++P+ DDDG + + G Q+
Sbjct: 84 ASIDAVRQALREEREIAIEILNYRKNGSTFWNALFISPVYDDDGRLRYFFGSQL 137
>gi|297844816|ref|XP_002890289.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336131|gb|EFH66548.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 450
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 276 LGWGRLARELTTLEAV--CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGG-EGVNMQPMD 332
L W LA + L A W + + G P R + S G+ L +FGG +GVN P+
Sbjct: 63 LLWFTLALTVVILVAAKQIWTQPMINGTPPPPRDSHSCTTVGDNLFVFGGTDGVN--PLK 120
Query: 333 DTFVLNLDAANPEWRRVSVKSS-PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVF---- 387
D ++L D ++ W+ SV+ P R GHT ++L G L VFGGCG+ +ND
Sbjct: 121 DLYIL--DTSSHTWKCPSVRGEGPEAREGHT-ATLVGKRLFVFGGCGKSSDINDEIYYND 177
Query: 388 VLDLDAKQPTWIE-VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT 446
V + + W V+ G PP R H SC +KLVV GG LSD ++LD T
Sbjct: 178 VYIFNTETFVWKRAVTIGNPPSARDSH-SCSSWKNKLVVIGGEDGHDYYLSDVHILD--T 234
Query: 447 DKPMWREIPTSWSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHL 488
D +W+E+ TS + R GH GR + +FGG + +L
Sbjct: 235 DTLIWKELNTSGQLLTPRAGHVTVSLGR-NIFVFGGFTDAQNL 276
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 129/294 (43%), Gaps = 47/294 (15%)
Query: 353 SSPPGRWGHTLSSLN-GSWLVVFGGCGRQGL-LNDVFVLD---------------LDAKQ 395
S P RWGHT +++ GS+L VFGG GR N V V D L A +
Sbjct: 20 SGPGKRWGHTCNAIKGGSFLYVFGGYGRDNCQTNQVHVFDAVGLLWFTLALTVVILVAAK 79
Query: 396 PTWIE-VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI 454
W + + G PP PR H SC G L V GG TD L D Y+LD T W+
Sbjct: 80 QIWTQPMINGTPPPPRDSH-SCTTVGDNLFVFGG-TDGVNPLKDLYILD--TSSHTWK-C 134
Query: 455 PT--SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLEC 512
P+ P +R GH+ ++ G+ ++ +FGG KS D+ DE
Sbjct: 135 PSVRGEGPEAREGHTATLVGK-RLFVFGGCGKSS------------DINDEIYYNDVYIF 181
Query: 513 NAFTGVGSQSAVV--PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSW 570
N T V ++ + PP D + S ++++ GG + S + +LD + W
Sbjct: 182 NTETFVWKRAVTIGNPPSARDSHSCSSWKNKLVVIGGEDGHDYYLSDVHILDT--DTLIW 239
Query: 571 RILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHEL----CLASK 620
+ LN GQ GH T + G + V GG T + + ++L+ L C+ SK
Sbjct: 240 KELNTSGQLLTPRAGHVTVSL-GRNIFVFGGFTDAQNLYDDLYVLDVDTCVWSK 292
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE---WRR- 348
W+ +VRG +R +A G RL +FGG G + D+ + ++ N E W+R
Sbjct: 132 WKCPSVRGEGPEAREGHTATLVGKRLFVFGGCGKSSDINDEIYYNDVYIFNTETFVWKRA 191
Query: 349 VSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV-SGGAPP 407
V++ + P R H+ SS +V+ G G L+DV +LD D W E+ + G
Sbjct: 192 VTIGNPPSARDSHSCSSWKNKLVVIGGEDGHDYYLSDVHILDTDTL--IWKELNTSGQLL 249
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS 462
PR+ H + + G + V GG TDA L D Y+LD+ D +W ++ T PS
Sbjct: 250 TPRAGHVTVSL-GRNIFVFGGFTDAQNLYDDLYVLDV--DTCVWSKVLTMGEGPS 301
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
E W++ G +R + S + N+LV+ GGE + + D +L+ D +
Sbjct: 184 ETFVWKRAVTIGNPPSARDSHSCSSWKNKLVVIGGEDGHDYYLSDVHILDTDTLIWKELN 243
Query: 349 VSVKSSPPGRWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLDAKQPTWIEVSGGAPP 407
S + P R GH SL G + VFGG Q L +D++VLD+D + + G P
Sbjct: 244 TSGQLLTP-RAGHVTVSL-GRNIFVFGGFTDAQNLYDDLYVLDVDTCVWSKVLTMGEGPS 301
Query: 408 LPRSWHSSCI--IEGSKLVVSGGCTDAGVLLSDTYLL 442
S +C+ + LVV GGC L D + L
Sbjct: 302 ARFSSAGACLDPHKAGFLVVVGGCNKNLEALDDMFYL 338
>gi|334182672|ref|NP_173296.3| galactose oxidase/kelch repeat domain-containing protein
[Arabidopsis thaliana]
gi|9795595|gb|AAF98413.1|AC026238_5 Hypothetical protein [Arabidopsis thaliana]
gi|332191613|gb|AEE29734.1| galactose oxidase/kelch repeat domain-containing protein
[Arabidopsis thaliana]
Length = 556
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 128/277 (46%), Gaps = 30/277 (10%)
Query: 353 SSPPGRWGHTLSSLN-GSWLVVFGGCGRQGL-LNDVFVLDLDAKQPTWIE-VSGGAPPLP 409
S P RWGHT +++ GS+L VFGG GR N V V DA + W + + G PP P
Sbjct: 20 SGPGKRWGHTCNAIKGGSFLYVFGGYGRDNCQTNQVHV--FDAAKQIWTQPMINGTPPPP 77
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPT--SWSPPSRLGHS 467
R H SC G L V GG TD L D Y+LD T W+ P+ P +R GHS
Sbjct: 78 RDSH-SCTTVGDNLFVFGG-TDGVNPLKDLYILD--TSSHTWK-CPSVRGEGPEAREGHS 132
Query: 468 LSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPP 527
++ G+ ++ +FGG KS + + E WK+ A T +G+ PP
Sbjct: 133 ATLVGK-RLFVFGGCGKSSGINEEIYYNDVYIFNTETFVWKR----AVT-IGN-----PP 181
Query: 528 PRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHS 587
D + S ++++ GG + S + +LD + W+ LN GQ GH
Sbjct: 182 SARDSHSCSSWKNKLVVIGGEDGHDYYLSDVHILDT--DTLIWKELNTSGQLLTPRAGHV 239
Query: 588 TCVVGGTRVLVLGGHTGEEWVLNELHEL----CLASK 620
T + G V GG T + + ++L+ L C+ SK
Sbjct: 240 TVSL-GRNFFVFGGFTDAQNLYDDLYVLDVDTCIWSK 275
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 103/206 (50%), Gaps = 21/206 (10%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGG-EGVNMQPMDDTFVLNLDAANPEWRRVSV 351
W + + G P R + S G+ L +FGG +GVN P+ D ++L D ++ W+ SV
Sbjct: 65 WTQPMINGTPPPPRDSHSCTTVGDNLFVFGGTDGVN--PLKDLYIL--DTSSHTWKCPSV 120
Query: 352 KSS-PPGRWGHTLSSLNGSWLVVFGGCGRQG------LLNDVFVLDLDAKQPTWIE-VSG 403
+ P R GH+ ++L G L VFGGCG+ NDV++ + + W V+
Sbjct: 121 RGEGPEAREGHS-ATLVGKRLFVFGGCGKSSGINEEIYYNDVYIFNTETF--VWKRAVTI 177
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS- 462
G PP R H SC +KLVV GG LSD ++LD TD +W+E+ TS +
Sbjct: 178 GNPPSARDSH-SCSSWKNKLVVIGGEDGHDYYLSDVHILD--TDTLIWKELNTSGQLLTP 234
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHL 488
R GH GR +FGG + +L
Sbjct: 235 RAGHVTVSLGR-NFFVFGGFTDAQNL 259
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGG----EGVNMQ-PMDDTFVLNLDAANPEWR 347
W+ +VRG +R SA G RL +FGG G+N + +D ++ N + W+
Sbjct: 115 WKCPSVRGEGPEAREGHSATLVGKRLFVFGGCGKSSGINEEIYYNDVYIFNTETF--VWK 172
Query: 348 R-VSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV-SGGA 405
R V++ + P R H+ SS +V+ G G L+DV +LD D W E+ + G
Sbjct: 173 RAVTIGNPPSARDSHSCSSWKNKLVVIGGEDGHDYYLSDVHILDTDTL--IWKELNTSGQ 230
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS 462
PR+ H + + G V GG TDA L D Y+LD+ D +W ++ T PS
Sbjct: 231 LLTPRAGHVTVSL-GRNFFVFGGFTDAQNLYDDLYVLDV--DTCIWSKVLTMGEGPS 284
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
E W++ G +R + S + N+LV+ GGE + + D +L+ D +
Sbjct: 167 ETFVWKRAVTIGNPPSARDSHSCSSWKNKLVVIGGEDGHDYYLSDVHILDTDTLIWKELN 226
Query: 349 VSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPL 408
S + P R GH SL ++ V G Q L +D++VLD+D + + G P
Sbjct: 227 TSGQLLTP-RAGHVTVSLGRNFFVFGGFTDAQNLYDDLYVLDVDTCIWSKVLTMGEGPSA 285
Query: 409 PRSWHSSCII--EGSKLVVSGGCTDAGVLLSDTYLL 442
S +C+ + LV+ GGC L D + L
Sbjct: 286 RFSSAGACLDPHKAGFLVIVGGCNKNLEALDDMFYL 321
>gi|448319142|ref|ZP_21508648.1| bacterio-opsin activator [Natronococcus jeotgali DSM 18795]
gi|445596756|gb|ELY50840.1| bacterio-opsin activator [Natronococcus jeotgali DSM 18795]
Length = 619
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++Y+N+ +E TGY ++V+GRNCR LQ DP
Sbjct: 129 PVGITISDPSREDNPLVYINEAYEEITGYDYEDVVGRNCRILQ---------GEASDPEA 179
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+R ++E EL N++KDGT N + +AP+R+D G VTH +G Q
Sbjct: 180 VAEMRTGIDEERPVTVELTNYRKDGTAFWNEVTIAPVRNDAGEVTHYVGFQ 230
>gi|115436122|ref|NP_001042819.1| Os01g0300900 [Oryza sativa Japonica Group]
gi|14495224|dbj|BAB60943.1| putative p40 [Oryza sativa Japonica Group]
gi|113532350|dbj|BAF04733.1| Os01g0300900 [Oryza sativa Japonica Group]
Length = 624
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 131/291 (45%), Gaps = 31/291 (10%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
LE + W GA +R + A G+R+++FGG + ++D VL+L EW
Sbjct: 53 NLETMAWSSLATTGARPGTRDSHGAALVGHRMMVFGGTN-GSKKVNDLHVLDLRTK--EW 109
Query: 347 RRVSVKSSPPG-RWGHTLSSLNG-SWLVVFGGC--GRQGLLNDVFVLDLDAKQPTWIEVS 402
+ K +PP R HT+++ G LVVFGG G LNDV VLD+ + EV
Sbjct: 110 TKPPCKGTPPSPRESHTVTACGGCDRLVVFGGSGEGEGNYLNDVHVLDVATMTWSSPEVK 169
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGG-CTDAGVLLSDTYLLDLTTDKPMWREIPTS-WSP 460
G P PR H + + GS+LVV GG C D + +LD+ D W SP
Sbjct: 170 GDVVPAPRDSHGAVAV-GSRLVVYGGDCGDR--YHGEVDVLDM--DAMAWSRFAVKGASP 224
Query: 461 PSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGS 520
R GH+ G +KV + GG+ + +++ +D+ + W QLE G
Sbjct: 225 GVRAGHAAVGVG-SKVYVIGGVGDKQYY----SDAWILDVANR--SWTQLEI-----CGQ 272
Query: 521 QSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
Q P R H AV + I I+GG ++L +L E P+ R
Sbjct: 273 Q----PQGRFSHSAVVLNT-DIAIYGGCGEDERPLNELLILQLGSEHPNGR 318
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 135/332 (40%), Gaps = 29/332 (8%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W V G P R SAC + +FGG + D LNL+ W ++
Sbjct: 9 WLYPKVVGFNPPERWGHSACFFEGVVYVFGGCCGGLH-FSDVLTLNLETM--AWSSLATT 65
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS-GGAPPLPRS 411
+ PG ++L G ++VFGG +ND+ VLDL K+ W + G PP PR
Sbjct: 66 GARPGTRDSHGAALVGHRMMVFGGTNGSKKVNDLHVLDLRTKE--WTKPPCKGTPPSPRE 123
Query: 412 WHSSCIIEG-SKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLS 469
H+ G +LVV GG + G L+D ++LD+ T E+ P R H
Sbjct: 124 SHTVTACGGCDRLVVFGGSGEGEGNYLNDVHVLDVATMTWSSPEVKGDVVPAPRDSHGAV 183
Query: 470 VYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPR 529
G V+ G H GE +D+ + W + + P R
Sbjct: 184 AVGSRLVVYGGDCGDRYH-----GEVDVLDM--DAMAWSRFAVKGAS---------PGVR 227
Query: 530 LDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTC 589
H AV + G + G + S ++LD + SW L + GQ P+ + HS
Sbjct: 228 AGHAAVGV--GSKVYVIGGVGDKQYYSDAWILDVANR--SWTQLEICGQQPQGRFSHSAV 283
Query: 590 VVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
V+ T + + GG +E LNEL L L S+
Sbjct: 284 VL-NTDIAIYGGCGEDERPLNELLILQLGSEH 314
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++A+ W +F V+GA R +A G+++ + GG G + Q D ++ LD AN
Sbjct: 205 DVLDMDAMAWSRFAVKGASPGVRAGHAAVGVGSKVYVIGGVG-DKQYYSDAWI--LDVAN 261
Query: 344 PEWRRVSV-KSSPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ + P GR+ H+ LN + + ++GGCG + LN++ +L L ++ P
Sbjct: 262 RSWTQLEICGQQPQGRFSHSAVVLN-TDIAIYGGCGEDERPLNELLILQLGSEHPN 316
>gi|383875517|pdb|3UE6|A Chain A, The Dark Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
gi|383875518|pdb|3UE6|B Chain B, The Dark Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
gi|383875519|pdb|3UE6|C Chain C, The Dark Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
gi|383875520|pdb|3UE6|D Chain D, The Dark Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
gi|383875521|pdb|3UE6|E Chain E, The Dark Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
gi|383875522|pdb|3UE6|F Chain F, The Dark Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
Length = 166
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ DA PD PI+Y ++ F TGY D++LGRNCRFLQ P DP V
Sbjct: 47 NFVITDASLPDNPIVYASRGFLTLTGYSLDQILGRNCRFLQ---------GPETDPRAVD 97
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+IR + +G++ LLN+++DGT N +A +RD G + + +G+Q
Sbjct: 98 KIRNAITKGVDTSVCLLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQ 146
>gi|448584371|ref|ZP_21647245.1| HTR-like protein [Haloferax gibbonsii ATCC 33959]
gi|445728269|gb|ELZ79875.1| HTR-like protein [Haloferax gibbonsii ATCC 33959]
Length = 716
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P V+ D D PI+YVN F TGY DE LGRNCRFLQ + D
Sbjct: 275 PIGVVLTDPDQADNPIVYVNDEFTDITGYSHDEALGRNCRFLQGEE---------TDEAA 325
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+R ++E ELLN++KDGT NR+R+API DDG+V +G Q
Sbjct: 326 VAELRAAVDEREPVTTELLNYRKDGTEFWNRVRIAPIF-DDGSVDLFVGFQ 375
>gi|448308287|ref|ZP_21498165.1| bacterio-opsin activator [Natronorubrum bangense JCM 10635]
gi|445594293|gb|ELY48459.1| bacterio-opsin activator [Natronorubrum bangense JCM 10635]
Length = 646
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++YVN + TGY DEV+GRNCRFLQ D +
Sbjct: 149 PVGITISDPDLEDNPLVYVNDAYRDMTGYSFDEVVGRNCRFLQGEDSSEE---------A 199
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+ ++E EL N++KDGTP N + +AP+RDDDGTVTH +G Q
Sbjct: 200 IAEMAAAIDEDYPVTVELKNYRKDGTPFWNEVTIAPVRDDDGTVTHYVGFQ 250
>gi|251772607|gb|EES53172.1| putative diguanylate cyclase/phosphodiesterase [Leptospirillum
ferrodiazotrophum]
Length = 1369
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 9/101 (8%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
DP ++YVN FE TGY A ++G+NCR LQ P DP V EIR+ L
Sbjct: 787 DPRGTVLYVNAAFERLTGYSARSMVGQNCRLLQ---------GPETDPETVREIRQALAR 837
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G F+ L N++KDGTP N L L P+++ G +TH +G+Q
Sbjct: 838 GQSFRKALRNYRKDGTPFWNLLSLVPLKNSAGVITHYVGVQ 878
>gi|251771710|gb|EES52285.1| PAS/PAC sensor signal transduction histidine kinase [Leptospirillum
ferrodiazotrophum]
Length = 496
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+ V+ADA PD P+I+VN FE +GY DE+L +NCRFL R R P ++
Sbjct: 141 AIVIADARLPDTPLIHVNPAFEEMSGYSLDEILDKNCRFLN----RTDRDQP-----GLA 191
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR + +G E + L N+KKDG+ N + L P+ DD+G +TH + I+
Sbjct: 192 AIRAAVRDGTEVRTVLRNYKKDGSLFFNEIHLFPVLDDNGILTHFVAIE 240
>gi|302803791|ref|XP_002983648.1| hypothetical protein SELMODRAFT_42940 [Selaginella moellendorffii]
gi|300148485|gb|EFJ15144.1| hypothetical protein SELMODRAFT_42940 [Selaginella moellendorffii]
Length = 387
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 137/318 (43%), Gaps = 40/318 (12%)
Query: 261 WGREVTGALELMTKKLGWGRLARELTTLEAV-----CWRKFTVRGAVEPSRCNFSACAAG 315
WG L+ G+GR + + W K ++G R + S+ A G
Sbjct: 5 WGHTCNAVRNLIYIFGGYGRDECQTNDVHVFDIGTYTWSKPVMKGTHPSPRDSHSSTAVG 64
Query: 316 NRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPG-RWGHTLSSLNGSWLVVF 374
++L +FGG P+DD FV LD A W + V P R GH+ +SL G L VF
Sbjct: 65 SKLYVFGGTD-GTSPLDDLFV--LDTATNTWGKPDVFGDVPAPREGHS-ASLIGDNLFVF 120
Query: 375 GGCGR------QGLLNDVFVLDLDAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSG 427
GGCG+ + ND+ V L+ W ++S G P+PR H +C + VV G
Sbjct: 121 GGCGKSSDPSEEEYYNDLHV--LNTSTFVWKKISTTGVSPIPRDSH-TCSSYKNCFVVMG 177
Query: 428 GCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSP-PSRLGHSLSVYGRTKVLMFGGLAKSG 486
G L+D ++LD T+ WRE+ T+ + R GH+ +G+ +++FGG +
Sbjct: 178 GEDGGNAYLNDVHILD--TETMAWREVKTTGAELMPRAGHTTISHGK-YLVVFGGFSDD- 233
Query: 487 HLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIF- 545
R + +T+DL + S P PR S+ R I+F
Sbjct: 234 --RKLFNDVHTLDL-----------TTGVWATSNPSGPGPSPRFSLAGDSVDAERGILFF 280
Query: 546 -GGSIAGLHSPSQLFLLD 562
GG L + ++ LD
Sbjct: 281 YGGCNEELEALDDMYFLD 298
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 129/275 (46%), Gaps = 38/275 (13%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPTWIE-VSGGAPPLPRSW 412
P +WGHT +++ + + +FGG GR + NDV V D+ TW + V G P PR
Sbjct: 1 PGCKWGHTCNAVR-NLIYIFGGYGRDECQTNDVHVFDIGTY--TWSKPVMKGTHPSPRDS 57
Query: 413 HSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD---KP-MWREIPTSWSPPSRLGHSL 468
HSS + GSKL V GG TD L D ++LD T+ KP ++ ++P R GHS
Sbjct: 58 HSSTAV-GSKLYVFGG-TDGTSPLDDLFVLDTATNTWGKPDVFGDVPA-----PREGHSA 110
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTID---LGDEEPQWKQLECNAFTGVGSQSAVV 525
S+ G + +FGG KS S E Y D L WK++ S + V
Sbjct: 111 SLIG-DNLFVFGGCGKSSD---PSEEEYYNDLHVLNTSTFVWKKI---------STTGVS 157
Query: 526 PPPRLDHVAVSMP-CGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 584
P PR H S C ++ GG G + + +LD E +WR + G
Sbjct: 158 PIPRDSHTCSSYKNC--FVVMGGEDGGNAYLNDVHILD--TETMAWREVKTTGAELMPRA 213
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
GH+T + G ++V GG + + + N++H L L +
Sbjct: 214 GHTT-ISHGKYLVVFGGFSDDRKLFNDVHTLDLTT 247
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 130/313 (41%), Gaps = 28/313 (8%)
Query: 307 CNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSL 366
CN A N + +FGG G + +D V D W + +K + P S+
Sbjct: 9 CN----AVRNLIYIFGGYGRDECQTNDVHVF--DIGTYTWSKPVMKGTHPSPRDSHSSTA 62
Query: 367 NGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVS 426
GS L VFGG L+D+FVLD +V G P PR HS+ +I G L V
Sbjct: 63 VGSKLYVFGGTDGTSPLDDLFVLDTATNTWGKPDVFGDVPA-PREGHSASLI-GDNLFVF 120
Query: 427 GGCTDAGVLLSDTYLLD---LTTDKPMWREIPTSW-SPPSRLGHSLSVYGRTKVLMFGGL 482
GGC + + Y D L T +W++I T+ SP R H+ S Y V+M G
Sbjct: 121 GGCGKSSDPSEEEYYNDLHVLNTSTFVWKKISTTGVSPIPRDSHTCSSYKNCFVVMGGED 180
Query: 483 AKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRI 542
+ +L + + +D E W++++ G++ PR H +S +
Sbjct: 181 GGNAYLN----DVHILDT--ETMAWREVKT-----TGAELM----PRAGHTTISH-GKYL 224
Query: 543 IIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGH 602
++FGG + + LD + + + PG P+F+ + + GG
Sbjct: 225 VVFGGFSDDRKLFNDVHTLDLTTGVWATSNPSGPGPSPRFSLAGDSVDAERGILFFYGGC 284
Query: 603 TGEEWVLNELHEL 615
E L++++ L
Sbjct: 285 NEELEALDDMYFL 297
>gi|323449211|gb|EGB05101.1| hypothetical protein AURANDRAFT_38723 [Aureococcus anophagefferens]
Length = 157
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 81/164 (49%), Gaps = 21/164 (12%)
Query: 1 MTSKKDKEEEEEGEGVIQGSGKRQKCSFEGGGGGGGDDTELSLKPGLLFYPTTPTSFVVA 60
MT ++ E E + S R+K E + SL L T +FV+
Sbjct: 11 MTEQQKDERRERNREHAKRSRVRKKFLLE---------PDYSLVKAL---QTAQQNFVIT 58
Query: 61 DAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRC 120
D PD PI++ + F TGY + VLGRNCRFLQ P DP V++IR+
Sbjct: 59 DPSLPDNPIVFASHGFLTLTGYSLESVLGRNCRFLQ---------GPRTDPRAVAKIRKA 109
Query: 121 LEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++EG + LLN++ DG+ N+ +AP+RD G V + +G+Q
Sbjct: 110 VDEGYDTSVCLLNYRIDGSTFFNQFFVAPLRDGQGNVVNYVGVQ 153
>gi|51944886|gb|AAU14171.1| blue light regulator 1 [Trichoderma atroviride]
Length = 1020
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRF Q D + A + VD
Sbjct: 353 AFVVCDVTMNDCPIIYVSDNFQNLTGYSRHEIIGQNCRFFQAPDGKVEAGSKREFVDDGA 412
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++R ++EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 413 VFNLKRMIKEGREVQQSLINYRKGGKPFLNLLTMIPIPWDTDEIRYFIGFQI 464
>gi|356513479|ref|XP_003525441.1| PREDICTED: actin-fragmin kinase-like [Glycine max]
Length = 438
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 109/218 (50%), Gaps = 22/218 (10%)
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
W + ++G+ R + + A G+ L +FGG M P+ D + LD + W ++
Sbjct: 63 AWSQPALKGSPPTPRDSHTCTAVGDNLFVFGGTD-GMNPLKDLHI--LDTSLQTWVSPTI 119
Query: 352 K-SSPPGRWGHTLSSLNGSWLVVFGGCGRQG------LLNDVFVLDLDAKQPTW-IEVSG 403
+ PP R GH+ +++ G L +FGGCG+ ND+++L+ + W +
Sbjct: 120 RGEGPPAREGHS-AAVVGKRLYIFGGCGKSADNNNELYYNDLYILNTETF--VWKCATTS 176
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-PPS 462
G PP PR H SC +K++V GG LSD ++LD TD +WRE+ TS P
Sbjct: 177 GTPPSPRDSH-SCSSWKNKIIVIGGEDGHDYYLSDIHILD--TDTLIWRELSTSGQLLPP 233
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDL 500
R GHS +G+ + +FGG + +L + Y +D+
Sbjct: 234 RAGHSTVSFGK-NLFVFGGFTDAQNLY---NDLYMLDI 267
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE---WRRV 349
W T+RG P+R SA G RL +FGG G + ++ + +L N E W+
Sbjct: 114 WVSPTIRGEGPPAREGHSAAVVGKRLYIFGGCGKSADNNNELYYNDLYILNTETFVWKCA 173
Query: 350 SVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPL 408
+ +PP R H+ SS +V+ G G L+D+ +LD D W E+S L
Sbjct: 174 TTSGTPPSPRDSHSCSSWKNKIIVIGGEDGHDYYLSDIHILDTDTL--IWRELSTSGQLL 231
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSL 468
P S + G L V GG TDA L +D Y+LD+ D +W + T+ + PS
Sbjct: 232 PPRAGHSTVSFGKNLFVFGGFTDAQNLYNDLYMLDI--DTGVWTNVTTATNGPSA---RF 286
Query: 469 SVYG------RTKVLMF-GGLAKS 485
SV G R+ VL+F GG KS
Sbjct: 287 SVAGDCLDPFRSGVLIFIGGCNKS 310
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 38/266 (14%)
Query: 307 CNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPG-RWGHTLSS 365
CN A +G + +FGG G + + V D W + ++K SPP R HT ++
Sbjct: 29 CN--AVKSGRLVYVFGGYGKDNCQTNQVHVF--DTVKQAWSQPALKGSPPTPRDSHTCTA 84
Query: 366 LNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIE--VSGGAPPLPRSWHSSCIIEGSKL 423
+ G L VFGG L D+ +LD + TW+ + G PP R HS+ ++ G +L
Sbjct: 85 V-GDNLFVFGGTDGMNPLKDLHILDTSLQ--TWVSPTIRGEGPP-AREGHSAAVV-GKRL 139
Query: 424 VVSGGCTDAGVLLSDTYLLD---LTTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVLMF 479
+ GGC + ++ Y D L T+ +W+ TS +PPS R HS S + + K+++
Sbjct: 140 YIFGGCGKSADNNNELYYNDLYILNTETFVWKCATTSGTPPSPRDSHSCSSW-KNKIIVI 198
Query: 480 GGLAKSGHLRLRSGESYTID---LGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVS 536
GG + GH + Y D L + W++L S S + PPR H VS
Sbjct: 199 GG--EDGH------DYYLSDIHILDTDTLIWREL---------STSGQLLPPRAGHSTVS 241
Query: 537 MPCGRIIIFGGSIAGLHSPSQLFLLD 562
+ +FGG + + L++LD
Sbjct: 242 F-GKNLFVFGGFTDAQNLYNDLYMLD 266
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 7/158 (4%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
E W+ T G R + S + N++++ GGE + + D +L+ D WR
Sbjct: 166 ETFVWKCATTSGTPPSPRDSHSCSSWKNKIIVIGGEDGHDYYLSDIHILDTDTL--IWRE 223
Query: 349 VSVKSS-PPGRWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
+S P R GH+ S G L VFGG Q L ND+++LD+D T + + P
Sbjct: 224 LSTSGQLLPPRAGHSTVSF-GKNLFVFGGFTDAQNLYNDLYMLDIDTGVWTNVTTATNGP 282
Query: 407 PLPRSWHSSCI--IEGSKLVVSGGCTDAGVLLSDTYLL 442
S C+ L+ GGC + L D Y L
Sbjct: 283 SARFSVAGDCLDPFRSGVLIFIGGCNKSLEALDDMYYL 320
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 26/210 (12%)
Query: 412 WHSSC--IIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSL 468
W +C + G + V GG + ++ D T K W + SPP+ R H+
Sbjct: 25 WGHTCNAVKSGRLVYVFGGYGKDNCQTNQVHVFD--TVKQAWSQPALKGSPPTPRDSHTC 82
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPP 528
+ G + +FGG L+ DL + + G G PP
Sbjct: 83 TAVGD-NLFVFGGTDGMNPLK---------DLHILDTSLQTWVSPTIRGEG------PPA 126
Query: 529 RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP---SEEKPSWRILNVPGQPPKFAWG 585
R H A ++ R+ IFGG + ++L+ D + E W+ G PP
Sbjct: 127 REGHSA-AVVGKRLYIFGGCGKSADNNNELYYNDLYILNTETFVWKCATTSGTPPSPRDS 185
Query: 586 HSTCVVGGTRVLVLGGHTGEEWVLNELHEL 615
HS C +++V+GG G ++ L+++H L
Sbjct: 186 HS-CSSWKNKIIVIGGEDGHDYYLSDIHIL 214
>gi|220702745|gb|ACL81171.1| putative blue-light photoreceptor PCMADA1 [Pilobolus crystallinus]
Length = 622
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ--RRHPLVDPVV 113
SF+V DA D PI+Y + FE TGY A+E++GRNCRFLQ D + R D
Sbjct: 69 SFLVTDARQYDCPIVYCSPTFEHLTGYHANEIVGRNCRFLQAPDGQVTCGSRRTYTDNQA 128
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++ + + E Q ++N++K G P VN + + PI +D+ V +G+Q+
Sbjct: 129 VFHLKAQMLQNKEHQASIINYRKGGQPFVNLITVIPITNDNNEVAFFVGLQV 180
>gi|448620193|ref|ZP_21667541.1| HTR-like protein [Haloferax denitrificans ATCC 35960]
gi|445756981|gb|EMA08337.1| HTR-like protein [Haloferax denitrificans ATCC 35960]
Length = 390
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 65 PDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEG 124
PD P++Y+N+ FE TGY A+ V GRNCRFL P DP V+EIR +E G
Sbjct: 286 PDDPVVYLNEAFETLTGYDAESVTGRNCRFLY---------GPETDPEAVAEIRSAVEAG 336
Query: 125 IEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
E+ + DG P NRL + PIRD DG V +G
Sbjct: 337 EPISAEIRTYDADGEPFRNRLDIRPIRDADGAVEFFVGFH 376
>gi|322700660|gb|EFY92414.1| white collar 1 [Metarhizium acridum CQMa 102]
Length = 1156
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D + A + VD
Sbjct: 479 AFVVCDVTMNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQAPDGKVEAGSKREFVDDGA 538
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ ++EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 539 VYNLKKMIQEGREVQQSLINYRKGGKPFLNLLTMIPIPWDTDDIRYFIGFQI 590
>gi|163866879|gb|ABY47609.1| white collar 1 [Fusarium oxysporum f. sp. lycopersici]
Length = 1020
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D + A + VD
Sbjct: 350 AFVVCDVSMNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQAPDGKVEAGSKREFVDDGA 409
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 410 VYNLKKMVHEGREVQQSLINYRKGGKPFLNLLTMIPIPWDTDEIRYFIGFQI 461
>gi|422652098|ref|ZP_16714886.1| histidine kinase [Pseudomonas syringae pv. actinidiae str. M302091]
gi|330965169|gb|EGH65429.1| histidine kinase [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 534
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY A+E+LG NCRFLQ P DP
Sbjct: 30 TTRMPMIVTDPNSPDNPIIFSNRAFLEMTGYAAEEILGTNCRFLQ---------GPDTDP 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV IR +EE + E++N++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AVVRSIRDAIEERADISAEIINYRKDGSSFWNALFISPVYNDAGDLIYFFASQL 134
>gi|422590595|ref|ZP_16665249.1| histidine kinase [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330877741|gb|EGH11890.1| histidine kinase [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 534
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY A+E+LG NCRFLQ P DP
Sbjct: 30 TTRMPMIVTDPNSPDNPIIFSNRAFLEMTGYAAEEILGTNCRFLQ---------GPDTDP 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV IR +EE + E++N++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AVVRSIRDAIEERADISAEIINYRKDGSSFWNALFISPVYNDAGDLIYFFASQL 134
>gi|254413183|ref|ZP_05026954.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
gi|196179803|gb|EDX74796.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
Length = 1145
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+++D PD PII+VN FE TGY A E+LGRNCRFLQ D + + E
Sbjct: 354 ILISDPHQPDNPIIFVNSGFERLTGYSASELLGRNCRFLQGDDSNQAQ---------LEE 404
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R+ + + Q L N++KDG+ N L ++P+R+ GT+TH +G+Q
Sbjct: 405 VRQAIATKKDCQITLRNYRKDGSVFWNDLYISPVRNSQGTLTHFLGVQ 452
>gi|448407789|ref|ZP_21573984.1| pas domain s-box [Halosimplex carlsbadense 2-9-1]
gi|445675039|gb|ELZ27574.1| pas domain s-box [Halosimplex carlsbadense 2-9-1]
Length = 648
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 9/106 (8%)
Query: 59 VADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIR 118
+ D DP+ P++YVN+ F TGY +E+LGRNCRFLQ DP V+ +R
Sbjct: 312 LVDGTDPERPLVYVNEGFGRVTGYDPEELLGRNCRFLQ---------GEATDPETVATLR 362
Query: 119 RCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+E E++N++ DG+P NR++L PI +D GTVTH +G Q
Sbjct: 363 AGIEAHEPVSTEIVNYRADGSPFWNRVQLYPIENDAGTVTHFLGFQ 408
>gi|409991969|ref|ZP_11275188.1| response regulator receiver modulated diguanylate cyclase
[Arthrospira platensis str. Paraca]
gi|409937163|gb|EKN78608.1| response regulator receiver modulated diguanylate cyclase
[Arthrospira platensis str. Paraca]
Length = 502
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T V+ D PD PIIYVN FE TGY A E+LG NCRFLQ +R P +D
Sbjct: 175 ATQNGVVITDPNQPDNPIIYVNFGFERLTGYPAHEILGSNCRFLQGN----ERDQPALD- 229
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+IRR + E E + L N+++DGT N L ++P+R++ G +T+ IGIQ
Sbjct: 230 ----DIRRAIAEAEECRVILKNYRRDGTMFWNELFISPVRNEQGELTNFIGIQ 278
>gi|341613667|ref|ZP_08700536.1| hypothetical protein CJLT1_01890 [Citromicrobium sp. JLT1363]
Length = 358
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 36 GDDTELSLKPGLLF---YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNC 92
G + S G+LF T + ++D PD PI++ N+ F TGY +E+LGRNC
Sbjct: 28 GQEDRFSDSSGVLFEQAMAQTRMAVCLSDPHQPDQPIVFANRAFRRLTGYEEEEILGRNC 87
Query: 93 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRD 152
RFLQ D V+ +R +E ELLN++KDGTP N L L PI D
Sbjct: 88 RFLQ---------GAKTDRDAVARVREAIENEDVLVIELLNYRKDGTPFWNALHLGPIYD 138
Query: 153 DDGTVTHIIGIQ 164
+G + + G Q
Sbjct: 139 SNGKLIYFFGSQ 150
>gi|258654481|ref|YP_003203637.1| PAS/PAC sensor protein [Nakamurella multipartita DSM 44233]
gi|258557706|gb|ACV80648.1| putative PAS/PAC sensor protein [Nakamurella multipartita DSM
44233]
Length = 365
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 42 SLKPGLLFYPTTPTS--FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD 99
+L PG+L S VAD PD P++Y N FE TGY A EVLGRNCRFLQ
Sbjct: 232 ALLPGILTRAAHDASVAITVADVTAPDQPLVYANPAFERLTGYAAAEVLGRNCRFLQAES 291
Query: 100 PRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTH 159
DP S IR + G + NF++DG N L+P+R+ G VTH
Sbjct: 292 G---------DPHERSAIRSAIANGDAVTTLIRNFRQDGHAFWNEFHLSPVRNGAGRVTH 342
Query: 160 IIGIQI 165
IG Q+
Sbjct: 343 YIGYQL 348
>gi|383757613|ref|YP_005436598.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
[Rubrivivax gelatinosus IL144]
gi|381378282|dbj|BAL95099.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Rubrivivax gelatinosus IL144]
Length = 737
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 12/124 (9%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D + YVN F TGY A+E+LG +C LQ A+ V +R L+
Sbjct: 78 DANRRTTYVNAAFVELTGYTAEEMLGNSCALLQGAATSAE---------TVQAMREALDR 128
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID-LNHVSYP--V 180
G F GELLN++KDGTP N L++ P+RDDDG +T +G+Q A+ D +N +S V
Sbjct: 129 GEPFHGELLNYRKDGTPFWNELKIVPVRDDDGVITQFVGVQRDVTARRDAMNKLSLAARV 188
Query: 181 FKEN 184
F+++
Sbjct: 189 FEQS 192
>gi|452077702|gb|AGF93651.1| signal-transducing histidine kinase [uncultured organism]
Length = 732
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 40 ELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD 99
EL LK + P + D D P+IYVN+ FE TGY +E +GRNCRFLQ
Sbjct: 259 ELELKSRAM--DEAPVGITITDPDREDNPMIYVNEGFEALTGYSKEEAVGRNCRFLQ--- 313
Query: 100 PRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTH 159
A R P V+E+RR ++ L N++KDG+ +R+ +AP+RD GTVT+
Sbjct: 314 GEATRERP------VAEMRRAIDRAEPVSVALRNYRKDGSQFWDRVSIAPVRDRAGTVTN 367
Query: 160 IIGIQ 164
+G Q
Sbjct: 368 YVGFQ 372
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 81/213 (38%), Gaps = 23/213 (10%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D D I YVN FE +GY +E +GR R L + D + R +
Sbjct: 403 DSDGSIEYVNPKFEARSGYTREEAVGRTPRLL---------KSGKQDDEFYDRLWRTVLA 453
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKE 183
G ++ L+N +K+G ++PI +D+G +TH + I+ + L V
Sbjct: 454 GDQWDAHLVNRRKNGELYHVDQTISPIANDEGALTHFVTIEADVTNR-RLREQQLEVLNR 512
Query: 184 NCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRI 243
+ G + L + D DE+ AH +AS+G +
Sbjct: 513 VLRHNLRNAVNVIEGRAAMLRKALD-------DDELRAHVNAIEDRSAALASLGDKSATV 565
Query: 244 RQLTKNEHVRKMVCQNAWGREVTGALELMTKKL 276
R L NE + C +VTG L + +L
Sbjct: 566 RSLFGNEAAAQTTC------DVTGLLTEVVDEL 592
>gi|448450276|ref|ZP_21592175.1| bacterio-opsin activator [Halorubrum litoreum JCM 13561]
gi|445812128|gb|EMA62124.1| bacterio-opsin activator [Halorubrum litoreum JCM 13561]
Length = 667
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D PD+P++YVN +E TGY +E LGRN RFLQ P DP
Sbjct: 150 PIGISISDPDLPDYPLVYVNNAWEEHTGYPVEEALGRNPRFLQ---------GPGTDPET 200
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V EI + E E+ N+++DGTP N L +API D+DG + H +G Q
Sbjct: 201 VEEIGDAIANEEEATVEIRNYRRDGTPFWNELTVAPIYDEDGDLAHYVGFQ 251
>gi|346970954|gb|EGY14406.1| vivid PAS protein VVD [Verticillium dahliae VdLs.17]
Length = 183
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP--LVDPV 112
+ V+ D PD PI+Y ++ F TGY E+LGRNCRFLQ + R P VD
Sbjct: 67 VALVLCDLAQPDCPIVYASEAFTFLTGYSNAEILGRNCRFLQAPGGKVSRSSPRKYVDDR 126
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+V ++R+ +E+ E Q E+ NF+KDG+P +N L + P+ D + +G Q+
Sbjct: 127 MVKKMRKAVEKNDEVQLEVQNFRKDGSPFMNILTMIPVTWDSEDYRYSVGFQV 179
>gi|448428454|ref|ZP_21584266.1| bacterio-opsin activator [Halorubrum terrestre JCM 10247]
gi|448507510|ref|ZP_21615021.1| bacterio-opsin activator [Halorubrum distributum JCM 9100]
gi|448523274|ref|ZP_21618627.1| bacterio-opsin activator [Halorubrum distributum JCM 10118]
gi|445676419|gb|ELZ28941.1| bacterio-opsin activator [Halorubrum terrestre JCM 10247]
gi|445698465|gb|ELZ50509.1| bacterio-opsin activator [Halorubrum distributum JCM 9100]
gi|445701673|gb|ELZ53649.1| bacterio-opsin activator [Halorubrum distributum JCM 10118]
Length = 667
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D PD+P++YVN +E TGY +E LGRN RFLQ P DP
Sbjct: 150 PIGISISDPDLPDYPLVYVNNAWEEHTGYPVEEALGRNPRFLQ---------GPGTDPET 200
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V EI + E E+ N+++DGTP N L +API D+DG + H +G Q
Sbjct: 201 VEEIGDAIANEEEATVEIRNYRRDGTPFWNELTVAPIYDEDGDLAHYVGFQ 251
>gi|390957015|ref|YP_006420772.1| PAS domain-containing protein [Terriglobus roseus DSM 18391]
gi|390411933|gb|AFL87437.1| PAS domain S-box [Terriglobus roseus DSM 18391]
Length = 522
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 11/134 (8%)
Query: 40 ELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD 99
EL+L + T+ S +A+A PD P++YVN FE TGY +EV G+NCRFLQ +
Sbjct: 153 ELNLNRNIFRSVTSGIS--IANAQLPDMPLMYVNPAFEAMTGYSLEEVEGKNCRFLQNGE 210
Query: 100 PRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTH 159
D ++ IR L + E L N++KDG N L L+PIR+ DG +TH
Sbjct: 211 ---------TDQPGLTLIREALSKQRETVAVLKNYRKDGRLFWNELALSPIRNRDGELTH 261
Query: 160 IIGIQIFSEAKIDL 173
I+GIQ+ +++L
Sbjct: 262 IVGIQMDVTERVEL 275
>gi|448481617|ref|ZP_21604968.1| bacterio-opsin activator [Halorubrum arcis JCM 13916]
gi|445821870|gb|EMA71654.1| bacterio-opsin activator [Halorubrum arcis JCM 13916]
Length = 667
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D PD+P++YVN +E TGY +E LGRN RFLQ P DP
Sbjct: 150 PIGISISDPDLPDYPLVYVNNAWEEHTGYPVEEALGRNPRFLQ---------GPGTDPET 200
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V EI + E E+ N+++DGTP N L +API D+DG + H +G Q
Sbjct: 201 VEEIGDAIANEEEATVEIRNYRRDGTPFWNELTVAPIYDEDGDLAHYVGFQ 251
>gi|155212693|gb|ABT17414.1| bacterio-opsin activator protein [Halorubrum sp. TP009]
Length = 669
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D PD+P++YVN +E TGY +E LGRN RFLQ P DP
Sbjct: 152 PIGISISDPDLPDYPLVYVNNAWEEHTGYPVEEALGRNPRFLQ---------GPGTDPET 202
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V EI + E E+ N+++DGTP N L +API D+DG + H +G Q
Sbjct: 203 VEEIGDAIANEEEATVEIRNYRRDGTPFWNELTVAPIYDEDGDLAHYVGFQ 253
>gi|448468122|ref|ZP_21599753.1| bacterio-opsin activator [Halorubrum kocurii JCM 14978]
gi|445810865|gb|EMA60879.1| bacterio-opsin activator [Halorubrum kocurii JCM 14978]
Length = 668
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D PD+P++Y N+ + TGY +E LGRN RFLQ P DP
Sbjct: 150 PVGVSISDPDLPDYPLVYANEAWVDHTGYPIEEALGRNPRFLQ---------GPGTDPET 200
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V I + + + E E+ N++KDGTP N L +AP+ DDDG + H +G Q
Sbjct: 201 VERIAKAVADNEEITVEIRNYRKDGTPFWNELTVAPVYDDDGEIAHYVGFQ 251
>gi|359783901|ref|ZP_09287108.1| histidine kinase [Pseudomonas psychrotolerans L19]
gi|359368140|gb|EHK68724.1| histidine kinase [Pseudomonas psychrotolerans L19]
Length = 537
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N F TGY+ DE+LGRNCRFLQ P D
Sbjct: 34 TTRMPMLVTDPKQPDNPIIFANNAFTDMTGYQVDELLGRNCRFLQ---------GPETDR 84
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV +IR +E+ E E++N++KDG+ N L ++P+ +D G +T+ Q+
Sbjct: 85 SVVGQIREAVEQEREISVEIINYRKDGSTFWNALFVSPVYNDAGELTYYFASQL 138
>gi|342885348|gb|EGU85389.1| hypothetical protein FOXB_04100 [Fusarium oxysporum Fo5176]
Length = 1020
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D + A + VD
Sbjct: 350 AFVVCDVSMNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQAPDGKVEAGSKREFVDDGA 409
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 410 VYNLKKMVHEGREVQQSLINYRKGGKPFLNLLTMIPIPWDTDEIRYFIGFQI 461
>gi|157310199|emb|CAO85915.1| white collar 1-like protein [Fusarium fujikuroi]
Length = 1024
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D + A + VD
Sbjct: 354 AFVVCDVSMNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQAPDGKVEAGSKREFVDDGA 413
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 414 VYNLKKMVHEGREVQQSLINYRKGGKPFLNLLTMIPIPWDTDEIRYFIGFQI 465
>gi|254505056|ref|ZP_05117207.1| hypothetical protein SADFL11_5096 [Labrenzia alexandrii DFL-11]
gi|222441127|gb|EEE47806.1| hypothetical protein SADFL11_5096 [Labrenzia alexandrii DFL-11]
Length = 124
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
S V +D PD P+I+V+ FE TGY + E +GRNCRFLQ P +P +
Sbjct: 22 SVVFSDPNVPDNPMIFVSDEFERQTGYTSAEAVGRNCRFLQ---------GPETNPFAIE 72
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR+ L+ F ++LN++KDG P +NRLR+ PI D DG + G Q
Sbjct: 73 AIRQGLKAQTRFTIDILNYRKDGMPFMNRLRIRPIIDGDGRLIFFAGAQ 121
>gi|408389592|gb|EKJ69032.1| WC-1 [Fusarium pseudograminearum CS3096]
Length = 1033
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D + A + VD
Sbjct: 362 AFVVCDVSMNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQAPDGKVEAGSKREFVDDGA 421
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 422 VYNLKKMVHEGREVQQSLINYRKGGKPFLNLLTMIPIPWDTDEIRYFIGFQI 473
>gi|373956387|ref|ZP_09616347.1| PAS/PAC sensor signal transduction histidine kinase
[Mucilaginibacter paludis DSM 18603]
gi|373892987|gb|EHQ28884.1| PAS/PAC sensor signal transduction histidine kinase
[Mucilaginibacter paludis DSM 18603]
Length = 508
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
V+ D PD PIIY NK FE TGY E++G NCRFLQ D + R L
Sbjct: 31 VITDHTQPDEPIIYCNKAFESITGYTNKEIIGHNCRFLQDGDNEQEGRRRL--------- 81
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R ++ G Q E+ N+KK+G + N L ++P++D DG VT+ IGIQ
Sbjct: 82 REAIKNGEHCQVEIRNYKKNGRMIWNELMISPVKDRDGNVTNFIGIQ 128
>gi|448467413|ref|ZP_21599425.1| bacterio-opsin activator [Halorubrum kocurii JCM 14978]
gi|445812289|gb|EMA62283.1| bacterio-opsin activator [Halorubrum kocurii JCM 14978]
Length = 555
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P +ADA +PD P+IYVN FE TGY +GRNCRFLQ A R P
Sbjct: 44 PVGITIADATEPDMPLIYVNAAFERMTGYSTSYAVGRNCRFLQ---GEATREKP------ 94
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V ++R +E G EL N+++DG N + LAP+RD+ + + +G Q
Sbjct: 95 VRQMRAAIENGEPTTVELRNYRRDGELFWNEVTLAPLRDEADEIAYYVGFQ 145
>gi|448589464|ref|ZP_21649623.1| bacterio-opsin activator [Haloferax elongans ATCC BAA-1513]
gi|445735892|gb|ELZ87440.1| bacterio-opsin activator [Haloferax elongans ATCC BAA-1513]
Length = 661
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D PD P++Y N FE TGY +E LGRNCR+LQ +R
Sbjct: 141 PVGITISDGSLPDHPLVYANDAFESMTGYTVEEALGRNCRYLQGNKTNQER--------- 191
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+RR ++ ELLN+++ G+ NR+ +AP+ DG+VTH +G Q
Sbjct: 192 VAELRRAIDAEESASVELLNYRRGGSTFWNRVDIAPLPGPDGSVTHYVGFQ 242
>gi|302883632|ref|XP_003040715.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256721605|gb|EEU35002.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1025
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D + A + VD
Sbjct: 356 AFVVCDVTMNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQAPDGKVEAGSKREFVDDGA 415
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 416 VYNLKQMIHEGKEVQQSLINYRKGGKPFLNLLTMIPIPWDTDEIRYFIGFQI 467
>gi|372280141|ref|ZP_09516177.1| putative signal transduction histidine kinase [Oceanicola sp. S124]
Length = 346
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
S V+ D PD PI+YVN+ FE TGY + +GRNCRFLQ + DP +
Sbjct: 29 SMVLTDPALPDNPIVYVNRAFEEVTGYMSGMAIGRNCRFLQGEN---------TDPDDIK 79
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R L+ + +L+N++ DG+ +NRL + PIR +DG++ + +G+Q
Sbjct: 80 RLREALDREEDCTVDLVNYRADGSEFINRLMMTPIRSEDGSLRYFLGMQ 128
>gi|224121402|ref|XP_002318573.1| predicted protein [Populus trichocarpa]
gi|222859246|gb|EEE96793.1| predicted protein [Populus trichocarpa]
Length = 398
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 124/271 (45%), Gaps = 32/271 (11%)
Query: 353 SSPPGRWGHTLSSLNGS-WLVVFGGCGRQGL-LNDVFVLDLDAKQPTWIE-VSGGAPPLP 409
+ P RWGHT +S+ G +L VFGG G+ N V V D TW + + G P+P
Sbjct: 20 NGPRKRWGHTCNSIKGGRFLYVFGGYGKDNCQTNQVHV--FDTVNQTWSQPMLNGTLPVP 77
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLS 469
R H SC G L V GG TD L D +LD ++ + + P +R GHS +
Sbjct: 78 RDSH-SCTTVGENLYVFGG-TDGMNPLKDLRILDTSSHTWISPNVRGD-GPDAREGHSAA 134
Query: 470 VYGRTKVLMFGGLAKSGHLRLRSGESYTID---LGDEEPQWKQLECNAFTGVGSQSAVVP 526
+ G+ ++ +FGG KS S E Y D L E WKQ + + P
Sbjct: 135 LVGK-RLFIFGGCGKSSD---NSHEIYYNDLYILNTETFVWKQ----------AITTGTP 180
Query: 527 PPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ--PPKFAW 584
P D S +II+ GG + S + +LD E W+ LN GQ PP+
Sbjct: 181 PSARDSHTCSSWRDKIIVIGGEDGHDYYLSDVHILDT--ETLVWKELNTSGQKLPPRA-- 236
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWVLNELHEL 615
GHST V G + V GG T + + ++LH L
Sbjct: 237 GHST-VSFGKNLFVFGGFTDAQNLYDDLHML 266
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W + + G + R + S G L +FGG M P+ D +L D ++ W +V+
Sbjct: 65 WSQPMLNGTLPVPRDSHSCTTVGENLYVFGGTD-GMNPLKDLRIL--DTSSHTWISPNVR 121
Query: 353 SS-PPGRWGHTLSSLNGSWLVVFGGCGRQG------LLNDVFVLDLDAKQPTWIE-VSGG 404
P R GH+ ++L G L +FGGCG+ ND+++L+ + W + ++ G
Sbjct: 122 GDGPDAREGHS-AALVGKRLFIFGGCGKSSDNSHEIYYNDLYILNTETF--VWKQAITTG 178
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSP-PSR 463
PP R H +C K++V GG LSD ++LD T+ +W+E+ TS P R
Sbjct: 179 TPPSARDSH-TCSSWRDKIIVIGGEDGHDYYLSDVHILD--TETLVWKELNTSGQKLPPR 235
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHL 488
GHS +G+ + +FGG + +L
Sbjct: 236 AGHSTVSFGK-NLFVFGGFTDAQNL 259
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 80/174 (45%), Gaps = 8/174 (4%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE---WRRV 349
W VRG +R SA G RL +FGG G + + + +L N E W++
Sbjct: 115 WISPNVRGDGPDAREGHSAALVGKRLFIFGGCGKSSDNSHEIYYNDLYILNTETFVWKQA 174
Query: 350 SVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPL 408
+PP R HT SS +V+ G G L+DV +LD + + SG P
Sbjct: 175 ITTGTPPSARDSHTCSSWRDKIIVIGGEDGHDYYLSDVHILDTETLVWKELNTSGQKLP- 233
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS 462
PR+ HS+ G L V GG TDA L D ++L++ T +W + T+ PS
Sbjct: 234 PRAGHSTVSF-GKNLFVFGGFTDAQNLYDDLHMLNVETG--IWTMVMTTGDGPS 284
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 9/170 (5%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
E W++ G +R + + + +++++ GGE + + D + LD W+
Sbjct: 167 ETFVWKQAITTGTPPSARDSHTCSSWRDKIIVIGGEDGHDYYLSDVHI--LDTETLVWKE 224
Query: 349 VSVKSSP-PGRWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
++ P R GH+ S G L VFGG Q L +D+ +L+++ T + +G P
Sbjct: 225 LNTSGQKLPPRAGHSTVSF-GKNLFVFGGFTDAQNLYDDLHMLNVETGIWTMVMTTGDGP 283
Query: 407 PLPRSWHSSCI--IEGSKLVVSGGCTDAGVLLSDTYLLD--LTTDKPMWR 452
S C+ ++G LV GGC + L D Y L LT + WR
Sbjct: 284 SARFSVAGDCLDPLKGGVLVFIGGCNKSLEALEDMYYLHTGLTRVQDEWR 333
>gi|46127127|ref|XP_388117.1| hypothetical protein FG07941.1 [Gibberella zeae PH-1]
Length = 1035
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D + A + VD
Sbjct: 364 AFVVCDVSMNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQAPDGKVEAGSKREFVDDGA 423
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 424 VYNLKKMVHEGREVQQSLINYRKGGKPFLNLLTMIPIPWDTDEIRYFIGFQI 475
>gi|188991140|ref|YP_001903150.1| histidine kinase [Xanthomonas campestris pv. campestris str. B100]
gi|167732900|emb|CAP51096.1| Sensory box histidine kinase/response regulator [Xanthomonas
campestris pv. campestris]
Length = 540
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D + PD PI++ N+ F TGY ADE++G NCRFLQ P D
Sbjct: 36 TTRMPMTVTDPYLPDNPIVFANRAFLEMTGYAADEIIGNNCRFLQ---------GPETDR 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++R ++ EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 87 QAVIDVREAIDNRREFATEVLNYRKDGSTFWNALFVSPVFDDTGKLVYFFGSQL 140
>gi|82491928|gb|ABB77844.1| white collar one A [Phycomyces blakesleeanus]
Length = 624
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 68/114 (59%), Gaps = 6/114 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR----AQRRHPLVDP 111
SF+V+DA D PIIY + FE TGY ++E+LG+NCRFLQ D ++RRH D
Sbjct: 82 SFLVSDARQYDCPIIYCSPAFETLTGYSSNEILGKNCRFLQAPDGLVTGGSRRRH--TDN 139
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++ L + E Q ++N++K G VN + + P+ D+ G V + +G+Q+
Sbjct: 140 QAVYHLKAQLIQNREHQASIINYRKGGQAFVNLITVIPLLDNQGEVAYYVGLQV 193
>gi|413947977|gb|AFW80626.1| hypothetical protein ZEAMMB73_821757 [Zea mays]
Length = 374
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 144/333 (43%), Gaps = 32/333 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W V G P R SAC + +FGG + D V+ LD W ++
Sbjct: 9 WLYPKVVGFNPPERWGHSACFFEGVVYVFGGCCGGLHFSD---VVTLDVETMAWSALATT 65
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSW 412
PG ++L G ++VFGG +N++ VLDL ++ + + G AP PR
Sbjct: 66 GQRPGTRDSHGAALVGHRMLVFGGTNGGKKVNELHVLDLRTREWSRPQCRGAAPS-PRES 124
Query: 413 HSSCIIEGSKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
HS ++ G +LVV GG + G LSD ++LD+ T E +P R HS
Sbjct: 125 HSVTVVGGDRLVVFGGSGEGEGNYLSDVHVLDVPTMTWSTPEAIRGGAPAPRDSHSAVAV 184
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESYT--IDLGDEEPQ-WKQLECNAFTGVGSQSAVVPPP 528
G ++ +FGG G+ Y +D+ D + W + + P
Sbjct: 185 G-ARLFVFGG---------DCGDRYHGGVDVLDVDTMAWSRFPVKGAS---------PGV 225
Query: 529 RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHST 588
R H A+S+ +I I GG + S +++LD + SW L V GQ P+ + H T
Sbjct: 226 RAGHAALSVGS-KIYIIGG-VGDKQYYSDVWVLDVANR--SWSQLEVSGQRPQGRFSH-T 280
Query: 589 CVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
VV + + GG +E LNEL L L S+
Sbjct: 281 AVVMNNDIAIYGGCGEDERPLNELLILQLGSEH 313
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 121/288 (42%), Gaps = 28/288 (9%)
Query: 288 LEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWR 347
+E + W G +R + A G+R+++FGG + +++ VL+L EW
Sbjct: 54 VETMAWSALATTGQRPGTRDSHGAALVGHRMLVFGGTN-GGKKVNELHVLDLRTR--EWS 110
Query: 348 RVSVKSSPPG-RWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQPTWIEVSGG 404
R + + P R H+++ + G LVVFGG G L+DV VLD+ + E G
Sbjct: 111 RPQCRGAAPSPRESHSVTVVGGDRLVVFGGSGEGEGNYLSDVHVLDVPTMTWSTPEAIRG 170
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS-WSPPSR 463
P PR HS+ + V G C D +LD+ D W P SP R
Sbjct: 171 GAPAPRDSHSAVAVGARLFVFGGDCGDR--YHGGVDVLDV--DTMAWSRFPVKGASPGVR 226
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSA 523
GH+ G +K+ + GG+ + + + +D+ + W QLE S
Sbjct: 227 AGHAALSVG-SKIYIIGGVGDKQYY----SDVWVLDVANRS--WSQLEV---------SG 270
Query: 524 VVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
P R H AV M I I+GG ++L +L E P+ R
Sbjct: 271 QRPQGRFSHTAVVMN-NDIAIYGGCGEDERPLNELLILQLGSEHPNGR 317
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++ + W +F V+GA R +A + G+++ + GG G + Q D +V LD AN
Sbjct: 204 DVLDVDTMAWSRFPVKGASPGVRAGHAALSVGSKIYIIGGVG-DKQYYSDVWV--LDVAN 260
Query: 344 PEWRRVSVKSS-PPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ V P GR+ HT +N + ++GGCG + LN++ +L L ++ P
Sbjct: 261 RSWSQLEVSGQRPQGRFSHTAVVMNND-IAIYGGCGEDERPLNELLILQLGSEHPN 315
>gi|384428356|ref|YP_005637715.1| two-component system sensor-response regulator hybrid protein
[Xanthomonas campestris pv. raphani 756C]
gi|341937458|gb|AEL07597.1| two-component system sensor-response regulator hybrid protein
[Xanthomonas campestris pv. raphani 756C]
Length = 540
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT V D + PD PI++ N+ F TGY ADE++G NCRFLQ P D
Sbjct: 36 TTRMPMTVTDPYLPDNPIVFANRAFLEMTGYAADEIIGNNCRFLQ---------GPETDR 86
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++R ++ EF E+LN++KDG+ N L ++P+ DD G + + G Q+
Sbjct: 87 QAVIDVREAIDSRREFATEVLNYRKDGSTFWNALFVSPVFDDTGKLVYFFGSQL 140
>gi|326487672|dbj|BAK05508.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 503
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 119/265 (44%), Gaps = 31/265 (11%)
Query: 354 SPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAP-----PL 408
+P R GHT ++ GS +VVFGG + L D+ V D++ + E SG P P
Sbjct: 24 APAPRSGHTAVAIGGSKVVVFGGFADKRFLADIAVYDVENRLWYTPECSGSGPDGQPGPS 83
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHS 467
PR++H + +I+ + + G G L D ++LD TD W E+ PS R +
Sbjct: 84 PRAFHVAVVIDCNMFIFGG--RSGGKRLGDFWMLD--TDIWQWSEMTGFGDLPSPREFAA 139
Query: 468 LSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPP 527
S G K++M GG L + Y +D E W +L A TG PP
Sbjct: 140 ASAIGNRKIVMHGGWDGKKWL----SDVYVMDTMSLE--WTEL---AVTG------SAPP 184
Query: 528 PRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLL----DPSEEKPSWRILNVPGQPPKFA 583
PR H A +M R++IFGG L+ L + E P W L +PGQ P
Sbjct: 185 PRCGHSA-TMIEKRLLIFGGRGGTGPIMGDLWALKGITEEDNETPGWTQLKLPGQSPSAR 243
Query: 584 WGHSTCVVGGTRVLVLGGHTGEEWV 608
GHS GG +L+ GGH W+
Sbjct: 244 CGHS-VTSGGPYLLLFGGHGTGGWL 267
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLN----LDAANPEWRR 348
W + V G+ P RC SA RL++FGG G M D + L D P W +
Sbjct: 173 WTELAVTGSAPPPRCGHSATMIEKRLLIFGGRGGTGPIMGDLWALKGITEEDNETPGWTQ 232
Query: 349 VSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLN--DVFVLD---LDAKQPTWIEV- 401
+ + SP R GH+++S G +L++FGG G G L+ DV+ + LD W +
Sbjct: 233 LKLPGQSPSARCGHSVTS-GGPYLLLFGGHGTGGWLSRYDVYYNECVILDRVSVQWKRLP 291
Query: 402 SGGAPPLPRSWHS-SCIIEGSKLVVSGG 428
+ PP PR++HS +CI G + ++ GG
Sbjct: 292 TSNEPPPPRAYHSMTCI--GPRFLLFGG 317
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W + T G + R +A A GNR ++ G + + D +V +D + EW ++V
Sbjct: 122 WSEMTGFGDLPSPREFAAASAIGNRKIVMHGGWDGKKWLSDVYV--MDTMSLEWTELAVT 179
Query: 353 -SSPPGRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVL----DLDAKQPTWIEVS-GGA 405
S+PP R GH+ + + L++FGG G G ++ D++ L + D + P W ++ G
Sbjct: 180 GSAPPPRCGHSATMIEKR-LLIFGGRGGTGPIMGDLWALKGITEEDNETPGWTQLKLPGQ 238
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAG------VLLSDTYLLDLTTDKPMWREIPTSWS 459
P R H S G L++ GG G V ++ +LD + + W+ +PTS
Sbjct: 239 SPSARCGH-SVTSGGPYLLLFGGHGTGGWLSRYDVYYNECVILDRVSVQ--WKRLPTSNE 295
Query: 460 -PPSRLGHSLSVYGRTKVLMFGGL 482
PP R HS++ G + L+FGG
Sbjct: 296 PPPPRAYHSMTCIG-PRFLLFGGF 318
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVN--MQPMDDTF--VLNLDAANP 344
E W + + G +RC S + G L+LFGG G + D + + LD +
Sbjct: 226 ETPGWTQLKLPGQSPSARCGHSVTSGGPYLLLFGGHGTGGWLSRYDVYYNECVILDRVSV 285
Query: 345 EWRRVSVKSS-PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVL 389
+W+R+ + PP R H+++ + G ++FGG + D++ L
Sbjct: 286 QWKRLPTSNEPPPPRAYHSMTCI-GPRFLLFGGFDGKNTFGDLWWL 330
>gi|322707947|gb|EFY99524.1| white collar 1 [Metarhizium anisopliae ARSEF 23]
Length = 1040
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D + A + VD
Sbjct: 365 AFVVCDVTMNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQAPDGKVEAGSKREFVDDGA 424
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++ ++EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 425 VYNLKNMIQEGREVQQSLINYRKGGKPFLNLLTMIPIPWDTDDIRYFIGFQI 476
>gi|393763868|ref|ZP_10352481.1| response regulator receiver modulated PAS/PAC sensor-containing
diguanylate cyclase/phosphodiesterase [Alishewanella agri
BL06]
gi|392605182|gb|EIW88080.1| response regulator receiver modulated PAS/PAC sensor-containing
diguanylate cyclase/phosphodiesterase [Alishewanella agri
BL06]
Length = 1590
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 60/107 (56%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
V+AD PD P+ YVN FE TGY +DE +G NCRFLQ + D + + +I
Sbjct: 910 VIADITWPDMPVTYVNYAFERLTGYSSDEAIGHNCRFLQGTER---------DELAIKQI 960
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R + E L N++KDG+ N L LAP+ D+ G +TH IGIQ
Sbjct: 961 RHAIAARQECSVVLKNYRKDGSIFWNNLFLAPVPDEQGVITHYIGIQ 1007
>gi|420240016|ref|ZP_14744286.1| PAS domain S-box [Rhizobium sp. CF080]
gi|398077991|gb|EJL68931.1| PAS domain S-box [Rhizobium sp. CF080]
Length = 349
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 68/132 (51%), Gaps = 13/132 (9%)
Query: 34 GGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCR 93
G D ELS + T VV+DA DFPI+ N F TGY ADE+LGRNCR
Sbjct: 21 GMVDRKELSA----FAFQRTRMPMVVSDARQSDFPIVLANDAFLDLTGYSADEILGRNCR 76
Query: 94 FLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDD 153
LQ A R L ++IR + + E E+LN+KKDGTP N+L L+PI D
Sbjct: 77 LLQ---GEATSRTAL------AQIRAAITQQREATIEILNYKKDGTPFWNQLHLSPIHDV 127
Query: 154 DGTVTHIIGIQI 165
G + + QI
Sbjct: 128 QGELAYYFASQI 139
>gi|14917059|sp|Q01371.2|WC1_NEUCR RecName: Full=White collar 1 protein; Short=WC1
gi|5441498|emb|CAA63964.2| wc-1 [Neurospora crassa]
Length = 1167
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++GRNCRFLQ D A + V+
Sbjct: 392 AFVVCDVTLNDCPIIYVSDNFQNLTGYSRHEIVGRNCRFLQAPDGNVEAGTKREFVENNA 451
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 452 VYTLKKTIAEGQEIQQSLINYRKGGKPFLNLLTMIPIPWDTEEIRYFIGFQI 503
>gi|448689879|ref|ZP_21695463.1| HTR-like protein [Haloarcula japonica DSM 6131]
gi|445778150|gb|EMA29110.1| HTR-like protein [Haloarcula japonica DSM 6131]
Length = 599
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 40 ELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD 99
ELSLK + TP + D PD PI+YVN F TGY + VLGRNCRFLQ
Sbjct: 271 ELSLKERAM--DQTPIGITITDPQQPDNPIVYVNDSFTELTGYSRESVLGRNCRFLQ--- 325
Query: 100 PRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTH 159
A R P ++E+ +E EL N++++G NR+ +AP+ DDDG V H
Sbjct: 326 GEATRDEP------IAELASAIEAEEPVSVELRNYREEGELFWNRVTVAPLTDDDGEVEH 379
Query: 160 IIGIQ 164
+G Q
Sbjct: 380 FVGFQ 384
>gi|153010973|ref|YP_001372187.1| signal transduction histidine kinase [Ochrobactrum anthropi ATCC
49188]
gi|221272051|sp|A6X554.1|LOVHK_OCHA4 RecName: Full=Blue-light-activated histidine kinase
gi|151562861|gb|ABS16358.1| signal transduction histidine kinase [Ochrobactrum anthropi ATCC
49188]
Length = 491
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
TP ++ + PD PII+ N+ F+ TGY ADE++G+NCRFLQ P DP
Sbjct: 30 TPMPMLITNPRLPDNPIIFANEAFQNLTGYEADEIIGKNCRFLQ---------GPGTDPK 80
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V I LE + ++LN+KK G P NRL ++P++ ++G + H + Q+
Sbjct: 81 HVEIIHSALEAEQSVEIDILNYKKSGEPFWNRLHISPVKTENGELHHFVSSQL 133
>gi|393769090|ref|ZP_10357618.1| signal transduction histidine kinase [Methylobacterium sp. GXF4]
gi|392725331|gb|EIZ82668.1| signal transduction histidine kinase [Methylobacterium sp. GXF4]
Length = 346
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 16/127 (12%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ +P+ V+ DA PD PI +VN F TG+ DE+LGRNCR LQ P
Sbjct: 6 FARSPSPMVITDARAPDNPITWVNDAFLGLTGFATDELLGRNCRMLQ---------GPGT 56
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEA 169
DP V+ I +E G ELLN++KDGTP + + + P+ D+ G+ F A
Sbjct: 57 DPAEVARIHAAIEAGEPVTAELLNYRKDGTPYWSAMTVTPVHDE-------AGLAYFYAA 109
Query: 170 KIDLNHV 176
+ D+ H
Sbjct: 110 QADMTHT 116
>gi|296419947|ref|XP_002839553.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635714|emb|CAZ83744.1| unnamed protein product [Tuber melanosporum]
Length = 874
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPLVDP 111
SFVV DA D PI+Y + FE TGY E+LGRNCRFLQ D P +R++ VD
Sbjct: 279 SFVVTDARKFDNPIVYCSATFERLTGYTKHEILGRNCRFLQAPDAKIVPGVKRKY--VDD 336
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
V ++ ++ E Q L+N++K G P N L + PI D V + +G Q +
Sbjct: 337 DAVYYLKNQIQAKKEAQTSLINYRKGGQPFTNLLTMIPITWDSPEVVYFVGFQ------V 390
Query: 172 DLNHVSYPVFKEN------CNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEV 219
DL + N N QY Q Y + L G+ D+V
Sbjct: 391 DLVEQPGAMVNRNKDGSFAINYQYSQLPTYVPAAAAALVMDSARSGLTVARDDV 444
>gi|168005245|ref|XP_001755321.1| PHOTB3 phototropin blue light photoreceptor [Physcomitrella patens
subsp. patens]
gi|162693449|gb|EDQ79801.1| PHOTB3 phototropin blue light photoreceptor [Physcomitrella patens
subsp. patens]
Length = 732
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ DA D PI++ ++ F TGY +EV+G+NCRFLQ P DP V
Sbjct: 19 TFVITDAMRLDHPIVFASRGFFTMTGYSPEEVIGQNCRFLQ---------GPDTDPKEVE 69
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR L+ G F G LLN++K+ TP N L + PI+D++ V IG+Q+
Sbjct: 70 KIRHGLKAGKPFCGRLLNYRKNRTPFWNILTITPIKDENDRVIKCIGMQV 119
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LG NCRFLQ RD D V
Sbjct: 228 NFVITDPRLPDNPIIFASDDFLELTEYSREEILGHNCRFLQGRDK---------DQNTVQ 278
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
+IR + E + +LLN+ K G P N L +RD G + + IG+Q+ S +D
Sbjct: 279 QIRDSIRENRDITVQLLNYTKSGKPFWNLFHLQAMRDQKGELQYFIGVQLDSSLYVD 335
>gi|428204021|ref|YP_007082610.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Pleurocapsa sp. PCC 7327]
gi|427981453|gb|AFY79053.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Pleurocapsa sp. PCC 7327]
Length = 479
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TP V+ DA P P+IYVN FE TGY + E +G+NCRFLQ D R+ P ++
Sbjct: 171 ATPNGIVITDANAPYNPVIYVNPGFERMTGYSSAEAIGKNCRFLQGED----RKQPALEI 226
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR+ + + E + + N++KDGT N + ++PIRD+ G VTH I +Q
Sbjct: 227 -----IRQAIRQQKECRVTVRNYRKDGTLFWNDISISPIRDEAGKVTHYIAVQ 274
>gi|448745950|ref|ZP_21727620.1| Diguanylate phosphodiesterase, EAL domain [Halomonas titanicae BH1]
gi|445566678|gb|ELY22784.1| Diguanylate phosphodiesterase, EAL domain [Halomonas titanicae BH1]
Length = 685
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
++ ++ DA D P++YVN FE TGY ++ LGRNCRFLQ + DP
Sbjct: 132 SSTNGVLIVDAQSSDLPLVYVNAAFERITGYSRNQALGRNCRFLQGEE---------TDP 182
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V +++ + E E + N++ DGT N L ++P+RD++G VTH +G+Q
Sbjct: 183 ATVKQLQVGITEQREVHVVIRNYRHDGTVFWNDLHISPVRDENGQVTHFVGVQ 235
>gi|296034487|gb|ADG85114.1| white-collar 1 [Gibberella moniliformis]
Length = 1023
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D + A + VD
Sbjct: 353 AFVVCDVSMNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQAPDGKVEAGSKREFVDDGA 412
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI D + + +G QI
Sbjct: 413 VYNLKKMVHEGREVQQSLINYRKGGKPFLNLLTMIPIPWDTDEIRYFVGFQI 464
>gi|167999434|ref|XP_001752422.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696322|gb|EDQ82661.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 487
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 140/318 (44%), Gaps = 68/318 (21%)
Query: 345 EWRRVSVKSSP---------PGR----------WGHTLSSL-NGSWLVVFGGCGRQGL-L 383
+W RV VK P PGR WGHT +++ NG +L VFGG G+
Sbjct: 2 KWERVKVKYKPKDIIEGKKSPGRKGGTAGPGKKWGHTANTVKNGRYLYVFGGYGKDDCQT 61
Query: 384 NDVFVLD------------------LDAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLV 424
D++V D L + + TW + + G PP PR H +C+ G+ L
Sbjct: 62 QDIYVFDSGIMFGSLDFFKSSFLYLLVSMKQTWSKPNIKGHPPTPRDSH-TCVTLGNSLY 120
Query: 425 VSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVLMFGGLA 483
V GG TD L+D ++LD T+ W T+ PS R GHS +V G T++ +FGG
Sbjct: 121 VYGG-TDGSSPLADIHVLDTVTN--TWSVPQTTGDAPSAREGHSAAVIG-TRMYIFGGCG 176
Query: 484 KSGHLRLRSGESYTIDLGDEEP------QWKQLECNAFTGVGSQSAVVPPPRLDHVAVSM 537
K+ S +SY DL E W ++ S S P R H ++S
Sbjct: 177 KAND---GSDDSYFNDLHYLETAAHVPHHWVKV---------STSGSHPAARDSH-SMSS 223
Query: 538 PCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVL 597
++II GG + S +++LD + WR L GQ GH+T + +
Sbjct: 224 WNNKLIILGGEDSLNSFLSDIYILD--TDTFVWRELRTSGQKIIPRAGHTTVAL-RKYLF 280
Query: 598 VLGGHTGEEWVLNELHEL 615
V GG T + + ++LH L
Sbjct: 281 VFGGFTDDRKLFDDLHVL 298
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 123/297 (41%), Gaps = 42/297 (14%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR-VSV 351
W K ++G R + + GN L ++GG P+ D V LD W +
Sbjct: 94 WSKPNIKGHPPTPRDSHTCVTLGNSLYVYGGTD-GSSPLADIHV--LDTVTNTWSVPQTT 150
Query: 352 KSSPPGRWGHTLSSLNGSWLVVFGGCGR------QGLLNDVFVLDLDAKQP-TWIEVS-G 403
+P R GH+ +++ G+ + +FGGCG+ ND+ L+ A P W++VS
Sbjct: 151 GDAPSAREGHS-AAVIGTRMYIFGGCGKANDGSDDSYFNDLHYLETAAHVPHHWVKVSTS 209
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSP-PS 462
G+ P R HS +KL++ GG LSD Y+LD TD +WRE+ TS
Sbjct: 210 GSHPAARDSHSMSSWN-NKLIILGGEDSLNSFLSDIYILD--TDTFVWRELRTSGQKIIP 266
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLEC-NAFTGVGSQ 521
R GH+ +V R + +FGG D+ + L N GV ++
Sbjct: 267 RAGHT-TVALRKYLFVFGGFT------------------DDRKLFDDLHVLNVDNGVWTK 307
Query: 522 ---SAVVPPPRLDHV--AVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRIL 573
S V P PR V G ++ GG L + ++ LD S L
Sbjct: 308 AITSGVGPSPRFSLAGDVVDAERGILLFIGGCNENLEALDDMYYLDTGTLNKSLMFL 364
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 134/331 (40%), Gaps = 33/331 (9%)
Query: 294 RKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKS 353
R V G C + ++FG ++ +F+ L + W + ++K
Sbjct: 46 RYLYVFGGYGKDDCQTQDIYVFDSGIMFG----SLDFFKSSFLYLLVSMKQTWSKPNIKG 101
Query: 354 SPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTW-IEVSGGAPPLPRS 411
PP R HT +L G+ L V+GG L D+ V LD TW + + G P R
Sbjct: 102 HPPTPRDSHTCVTL-GNSLYVYGGTDGSSPLADIHV--LDTVTNTWSVPQTTGDAPSARE 158
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPM------WREIPTSWS-PPSRL 464
HS+ +I G+++ + GGC A D+Y DL + W ++ TS S P +R
Sbjct: 159 GHSAAVI-GTRMYIFGGCGKANDGSDDSYFNDLHYLETAAHVPHHWVKVSTSGSHPAARD 217
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
HS+S + K+++ GG L S S L + W++L + Q +
Sbjct: 218 SHSMSSW-NNKLIILGGEDS-----LNSFLSDIYILDTDTFVWRELRTSG------QKII 265
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 584
PR H V++ + +FGG L +L+ + I + G P+F+
Sbjct: 266 ---PRAGHTTVALR-KYLFVFGGFTDDRKLFDDLHVLNVDNGVWTKAITSGVGPSPRFSL 321
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWVLNELHEL 615
+L +GG L++++ L
Sbjct: 322 AGDVVDAERGILLFIGGCNENLEALDDMYYL 352
>gi|115402937|ref|XP_001217545.1| predicted protein [Aspergillus terreus NIH2624]
gi|114189391|gb|EAU31091.1| predicted protein [Aspergillus terreus NIH2624]
Length = 831
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
+FV+ D D PI+YV++ FE TGY DE+LG+NCRFLQ D + R VD
Sbjct: 276 AFVLCDITKEDHPIVYVSEAFERLTGYTEDEILGKNCRFLQGPDGVVHQGMRRTFVDQQT 335
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+R +EE E Q L+N++K G P +N + + P+R + +G Q+
Sbjct: 336 AFRLRSTIEERTEIQASLINYRKGGQPFMNLITMIPVRWNSADYRFYVGFQV 387
>gi|404317909|ref|ZP_10965842.1| signal transduction histidine kinase [Ochrobactrum anthropi
CTS-325]
Length = 480
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
TP ++ + PD PII+ N+ F+ TGY ADE++G+NCRFLQ P DP
Sbjct: 19 TPMPMLITNPRLPDNPIIFANEAFQNLTGYEADEIIGKNCRFLQ---------GPGTDPK 69
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V I LE + ++LN+KK G P NRL ++P++ ++G + H + Q+
Sbjct: 70 HVEIIHSALEAEQSVEIDILNYKKSGEPFWNRLHISPVKTENGELHHFVSSQL 122
>gi|403223987|dbj|BAM42117.1| serine/threonine protein phosphatase [Theileria orientalis strain
Shintoku]
Length = 737
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 128/262 (48%), Gaps = 33/262 (12%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGC----GRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
PP R+GHT +S+ +V+FGG GR + D ++ D+ W ++ P PR
Sbjct: 14 PPPRFGHTSTSVGAGKVVLFGGAVGDVGRYTITADSYIYDVATNH--WCKLHVENAPSPR 71
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVLLSDT-YLLDLTTDKPM-WREIPTS-WSPPSRLGHS 467
+ H++ +E ++V+ GG T G L SD +LLDL DK + W +PT+ SP R GH+
Sbjct: 72 AAHAAACVESMQVVIFGGATGGGALSSDDLFLLDLRRDKQLSWIIVPTTGRSPGRRYGHT 131
Query: 468 LSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPP 527
+ V+ + +++ GG + S + + +++ + W + V S +PP
Sbjct: 132 M-VFSKPNLILIGG----NDGQQASNDVWVLNVENSPFSWNE--------VTFSSLRMPP 178
Query: 528 PRLDHVAVSMPC-----GRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVP---GQP 579
R+ H A + C G ++IFGG + S + + L + SW + P G
Sbjct: 179 RRVYHSA-DLCCEGPANGMVVIFGGRGSESKSLNDAWGLRQHRDG-SWDWVEAPMKAGMM 236
Query: 580 PKFAWGHSTCVVGGTRVLVLGG 601
P + HS C G++++V+GG
Sbjct: 237 PDARYQHS-CSFVGSKMVVMGG 257
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGE-GVNMQPMDDTFVLNLDAANP-EWRRVS 350
W K V A P + +AC ++V+FGG G DD F+L+L W V
Sbjct: 59 WCKLHVENAPSPRAAHAAACVESMQVVIFGGATGGGALSSDDLFLLDLRRDKQLSWIIVP 118
Query: 351 VKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLP 409
PG R+GHT+ + L++ GG Q NDV+VL+++ +W EV+ + +P
Sbjct: 119 TTGRSPGRRYGHTM-VFSKPNLILIGGNDGQQASNDVWVLNVENSPFSWNEVTFSSLRMP 177
Query: 410 --RSWHSSCI-IEGSK---LVVSGGCTDAGVLLSDTYLLDLTTDKPM-WREIPTS--WSP 460
R +HS+ + EG +V+ GG L+D + L D W E P P
Sbjct: 178 PRRVYHSADLCCEGPANGMVVIFGGRGSESKSLNDAWGLRQHRDGSWDWVEAPMKAGMMP 237
Query: 461 PSRLGHSLSVYGRTKVLMFG 480
+R HS S G V+M G
Sbjct: 238 DARYQHSCSFVGSKMVVMGG 257
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 299 RGAVEPSRCNFSACAAG-NRLVLFGGEGVNM---QPMDDTFVLNLDAANPEWRRVSVKSS 354
+G V P R ++ + G ++VLFGG ++ D+++ D A W ++ V+++
Sbjct: 10 QGDVPPPRFGHTSTSVGAGKVVLFGGAVGDVGRYTITADSYIY--DVATNHWCKLHVENA 67
Query: 355 PPGRWGHTLSSLNGSWLVVFGGCGRQGLL--NDVFVLDLDA-KQPTWIEVSGGAPPLPRS 411
P R H + + +V+FGG G L +D+F+LDL KQ +WI V R
Sbjct: 68 PSPRAAHAAACVESMQVVIFGGATGGGALSSDDLFLLDLRRDKQLSWIIVPTTGRSPGRR 127
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS--WSPPSRLGHSLS 469
+ + + L++ GG D +D ++L++ W E+ S PP R+ HS
Sbjct: 128 YGHTMVFSKPNLILIGG-NDGQQASNDVWVLNVENSPFSWNEVTFSSLRMPPRRVYHSAD 186
Query: 470 VY----GRTKVLMFGG 481
+ V++FGG
Sbjct: 187 LCCEGPANGMVVIFGG 202
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 514 AFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHS---PSQLFLLDPSEEKPSW 570
A+ + SQ VPPPR H + S+ G++++FGG++ + + ++ D + W
Sbjct: 2 AYQKIVSQQGDVPPPRFGHTSTSVGAGKVVLFGGAVGDVGRYTITADSYIYDVATNH--W 59
Query: 571 RILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTG 604
L+V P A H+ V +V++ GG TG
Sbjct: 60 CKLHVENAPSPRA-AHAAACVESMQVVIFGGATG 92
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 79/186 (42%), Gaps = 30/186 (16%)
Query: 318 LVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKS--SPPGRWGHTLS-----SLNGSW 370
L+L GG Q +D +VLN++ + W V+ S PP R H+ NG
Sbjct: 139 LILIGGND-GQQASNDVWVLNVENSPFSWNEVTFSSLRMPPRRVYHSADLCCEGPANG-M 196
Query: 371 LVVFGGCGRQGL-LNDVFVLDLDAKQP-TWIEVSGGAPPLPRS-WHSSCIIEGSKLVVSG 427
+V+FGG G + LND + L W+E A +P + + SC GSK+VV G
Sbjct: 197 VVIFGGRGSESKSLNDAWGLRQHRDGSWDWVEAPMKAGMMPDARYQHSCSFVGSKMVVMG 256
Query: 428 GCTDAG------VLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGG 481
G D V + DT L+ W I S +R HS +G + +FGG
Sbjct: 257 GRGDTDLNKALPVSVYDTETLE-------WFNI----SSINRFRHSCWKFG-PNLYIFGG 304
Query: 482 LAKSGH 487
+
Sbjct: 305 FSHQAQ 310
>gi|328865431|gb|EGG13817.1| Kelch repeat-containing protein [Dictyostelium fasciculatum]
Length = 416
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 151/341 (44%), Gaps = 48/341 (14%)
Query: 298 VRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKS-SPP 356
+ G R + C N L+LFGG ++D + LNLD N W V K SP
Sbjct: 42 ITGVFPIERHGHTTCLYKNTLILFGGTPDGSSGLNDLYFLNLD--NFTWVEVKTKGISPI 99
Query: 357 GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIE-VSGGAPPLPRSWHSS 415
GR+ H+ + + VFGG R LND+ LDL K TW E G P RS H+
Sbjct: 100 GRYRHSAIIIEDK-MYVFGGY-RSKCLNDLHTLDL--KTLTWSEPPQQGDTPTARSSHAV 155
Query: 416 CIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSLSVYGRT 474
C + G K+++ GG +G S+ L L T W + + +PPS R H++ +G+
Sbjct: 156 CSV-GKKMILFGG---SGARYSNE-LFTLNTVTNRWTKHEVTGTPPSERWCHTICSFGK- 209
Query: 475 KVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVA 534
KV FGG + + + + + +D E +W Q S V P PR H A
Sbjct: 210 KVYAFGG----SNDKKKDNKVFILD--TETFEWTQ---------PPTSGVSPSPRQLHTA 254
Query: 535 VSMPCGRIIIFGGSIAGLHSP-SQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGG 593
VS+ +I+FGG G H + L++L+ + W + P HS V G
Sbjct: 255 VSI-GESMIVFGG--WGRHQELNDLYILNTRTMR--WTCPKIETLIPCCRQLHSAWVYNG 309
Query: 594 TRVLVLGGHTGE-----------EWVLNELHELCLASKQDS 623
++ VLGG++ E ++ L +LC+ D+
Sbjct: 310 -KMYVLGGYSKSKRMNDVFCFSPEQTVSSLRDLCIEKIVDN 349
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 288 LEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWR 347
L+ + W + +G +R + + C+ G +++LFGG G ++ F LN W
Sbjct: 132 LKTLTWSEPPQQGDTPTARSSHAVCSVGKKMILFGGSGARYS--NELFTLN--TVTNRWT 187
Query: 348 RVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
+ V +PP RW HT+ S G + FGG + N VF+LD + + T SG +P
Sbjct: 188 KHEVTGTPPSERWCHTICSF-GKKVYAFGGSNDKKKDNKVFILDTETFEWTQPPTSGVSP 246
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGH 466
PR H++ I G ++V GG L+D Y+L+ T + +I T P R H
Sbjct: 247 S-PRQLHTAVSI-GESMIVFGGWGRHQE-LNDLYILNTRTMRWTCPKIET-LIPCCRQLH 302
Query: 467 SLSVYGRTKVLMFGGLAKSGHL 488
S VY K+ + GG +KS +
Sbjct: 303 SAWVYN-GKMYVLGGYSKSKRM 323
>gi|125570056|gb|EAZ11571.1| hypothetical protein OsJ_01439 [Oryza sativa Japonica Group]
Length = 624
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 131/291 (45%), Gaps = 31/291 (10%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
LE + W GA +R + A G+R+++FGG + ++D VL+L +W
Sbjct: 53 NLETMAWSSLATTGARPGTRDSHGAALVGHRMMVFGGTN-GSKKVNDLHVLDLRTK--DW 109
Query: 347 RRVSVKSSPPG-RWGHTLSSLNG-SWLVVFGGCGRQ--GLLNDVFVLDLDAKQPTWIEVS 402
+ K +PP R HT+++ G LVVFGG G LNDV VLD+ + EV
Sbjct: 110 TKPPCKGTPPSPRESHTVTACGGCDRLVVFGGSGEGEGNYLNDVHVLDVATMTWSSPEVK 169
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGG-CTDAGVLLSDTYLLDLTTDKPMWREIPTS-WSP 460
G P PR H + + GS+LVV GG C D + +LD+ D W SP
Sbjct: 170 GDVVPAPRDSHGAVAV-GSRLVVYGGDCGDR--YHGEVDVLDM--DAMAWSRFAVKGASP 224
Query: 461 PSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGS 520
R GH+ G +KV + GG+ + +++ +D+ + W QLE G
Sbjct: 225 GVRAGHAAVGVG-SKVYVIGGVGDKQYY----SDAWILDVANR--SWTQLEI-----CGQ 272
Query: 521 QSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
Q P R H AV + I I+GG ++L +L E P+ R
Sbjct: 273 Q----PQGRFSHSAVVLNT-DIAIYGGCGEDERPLNELLILQLGSEHPNGR 318
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 134/332 (40%), Gaps = 29/332 (8%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W V G P R SAC + +FGG + D LNL+ W ++
Sbjct: 9 WLYPKVVGFNPPERWGHSACFFEGVVYVFGGCCGGLH-FSDVLTLNLETM--AWSSLATT 65
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS-GGAPPLPRS 411
+ PG ++L G ++VFGG +ND+ VLDL K W + G PP PR
Sbjct: 66 GARPGTRDSHGAALVGHRMMVFGGTNGSKKVNDLHVLDLRTKD--WTKPPCKGTPPSPRE 123
Query: 412 WHSSCIIEG-SKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLS 469
H+ G +LVV GG + G L+D ++LD+ T E+ P R H
Sbjct: 124 SHTVTACGGCDRLVVFGGSGEGEGNYLNDVHVLDVATMTWSSPEVKGDVVPAPRDSHGAV 183
Query: 470 VYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPR 529
G V+ G H GE +D+ + W + + P R
Sbjct: 184 AVGSRLVVYGGDCGDRYH-----GEVDVLDM--DAMAWSRFAVKGAS---------PGVR 227
Query: 530 LDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTC 589
H AV + G + G + S ++LD + SW L + GQ P+ + HS
Sbjct: 228 AGHAAVGV--GSKVYVIGGVGDKQYYSDAWILDVANR--SWTQLEICGQQPQGRFSHSAV 283
Query: 590 VVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
V+ T + + GG +E LNEL L L S+
Sbjct: 284 VL-NTDIAIYGGCGEDERPLNELLILQLGSEH 314
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++A+ W +F V+GA R +A G+++ + GG G + Q D ++ LD AN
Sbjct: 205 DVLDMDAMAWSRFAVKGASPGVRAGHAAVGVGSKVYVIGGVG-DKQYYSDAWI--LDVAN 261
Query: 344 PEWRRVSV-KSSPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ + P GR+ H+ LN + + ++GGCG + LN++ +L L ++ P
Sbjct: 262 RSWTQLEICGQQPQGRFSHSAVVLN-TDIAIYGGCGEDERPLNELLILQLGSEHPN 316
>gi|406859298|gb|EKD12365.1| GATA zinc finger protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1013
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ +FE TGY EV+G+NCRFLQ + + A R VD
Sbjct: 328 AFVVCDIMTYDCPIIYVSDIFERLTGYSKHEVMGQNCRFLQSPEGKVVAGARRGFVDNSS 387
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQI 165
V ++ + E E Q L+N++K G P N L + PI +DD + +I+G Q+
Sbjct: 388 VYYLKNRIAEKKEAQRSLINYRKGGQPFTNLLTMIPITGEDDKEIRYIVGFQV 440
>gi|7493974|pir||S69206 regulator protein white collar 1 - Neurospora crassa
Length = 1154
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD--PRAQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++GRNCRFLQ D A + V+
Sbjct: 392 AFVVCDVTLNDCPIIYVSDNFQNLTGYSRHEIVGRNCRFLQAPDGNVEAGTKREFVENNA 451
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 452 VYTLKKTIAEGQEIQQSLINYRKGGKPFLNLLTMIPIPWDTEEIRYFIGFQI 503
>gi|336467442|gb|EGO55606.1| White collar 1 protein [Neurospora tetrasperma FGSC 2508]
gi|350287914|gb|EGZ69150.1| white collar 1 protein [Neurospora tetrasperma FGSC 2509]
Length = 1162
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++GRNCRFLQ D A + V+
Sbjct: 391 AFVVCDVTLNDCPIIYVSDNFQNLTGYSRHEIVGRNCRFLQAPDGNVEAGTKREFVENNA 450
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 451 VYTLKKTIAEGQEIQQSLINYRKGGKPFLNLLTMIPIPWDTEEIRYFIGFQI 502
>gi|443477887|ref|ZP_21067698.1| multi-sensor signal transduction histidine kinase [Pseudanabaena
biceps PCC 7429]
gi|443016903|gb|ELS31469.1| multi-sensor signal transduction histidine kinase [Pseudanabaena
biceps PCC 7429]
Length = 945
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ DA P+ P IYVN FE TGY A EV+GRNCRFLQ D R Q + + +
Sbjct: 269 IVITDATKPENPTIYVNPSFERITGYSAAEVIGRNCRFLQGGD-RQQ--------IGILD 319
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ + ++E E LLN++K+GTP N L +AP+ +D G +T+ IGIQ
Sbjct: 320 LHQAIQEQRECHAVLLNYRKNGTPFWNDLYIAPVFNDRGELTNYIGIQ 367
>gi|414877200|tpg|DAA54331.1| TPA: hypothetical protein ZEAMMB73_254266 [Zea mays]
Length = 294
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 130/313 (41%), Gaps = 31/313 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W V G P R SAC + +FGG + D VL L+ W V+
Sbjct: 9 WLYPKVVGFNPPERWGHSACFFEGFVYVFGGCCGGLHFGD---VLKLNVETMAWSLVATT 65
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSW 412
PG ++L G ++VFGG +ND+ VLDL + T + G PP PR
Sbjct: 66 GQCPGTRDSHGAALVGHRMLVFGGTNGGRKVNDLHVLDLRTGEWTRPQCKGAPPPSPRES 125
Query: 413 HSSCIIEGSKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
H+ ++ G +LVV GG + G L D ++LD+ T E+ +P R HS
Sbjct: 126 HTVTVVGGDRLVVFGGSGEGEGNYLCDVHVLDVPTMTWSSPEVRGGHAPAPRDSHSAVAV 185
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESYTID---LGDEEPQWKQLECNAFTGVGSQSAVVPPP 528
GR ++ +FGG G+ Y D L + W + P
Sbjct: 186 GR-RLFVFGG---------DCGDRYHGDVDVLDVDTMAWSMFPVKGAS---------PGV 226
Query: 529 RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHST 588
R H A+S+ II G + H S +++LD + SW L V GQ P+ + H T
Sbjct: 227 RAGHAAMSVGSKVYII--GGVGDKHYYSDVWVLDVTNR--SWSQLEVCGQRPQGRFSH-T 281
Query: 589 CVVGGTRVLVLGG 601
V T + + GG
Sbjct: 282 AVAMNTDIAIYGG 294
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 117/266 (43%), Gaps = 29/266 (10%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
+E + W G +R + A G+R+++FGG + ++D VL+L EW
Sbjct: 53 NVETMAWSLVATTGQCPGTRDSHGAALVGHRMLVFGGTN-GGRKVNDLHVLDLRTG--EW 109
Query: 347 RRVSVKSSPP--GRWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQPTWIEVS 402
R K +PP R HT++ + G LVVFGG G L DV VLD+ + EV
Sbjct: 110 TRPQCKGAPPPSPRESHTVTVVGGDRLVVFGGSGEGEGNYLCDVHVLDVPTMTWSSPEVR 169
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPT-SWSPP 461
GG P PR HS+ + V G C D D +LD+ D W P SP
Sbjct: 170 GGHAPAPRDSHSAVAVGRRLFVFGGDCGDR--YHGDVDVLDV--DTMAWSMFPVKGASPG 225
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
R GH+ G +KV + GG+ + + + +D+ + W QLE V Q
Sbjct: 226 VRAGHAAMSVG-SKVYIIGGVGDKHYYS----DVWVLDVTNR--SWSQLE------VCGQ 272
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGG 547
P R H AV+M I I+GG
Sbjct: 273 R---PQGRFSHTAVAMNT-DIAIYGG 294
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++ + W F V+GA R +A + G+++ + GG G + D +V LD N
Sbjct: 205 DVLDVDTMAWSMFPVKGASPGVRAGHAAMSVGSKVYIIGGVG-DKHYYSDVWV--LDVTN 261
Query: 344 PEWRRVSV-KSSPPGRWGHTLSSLNGSWLVVFGG 376
W ++ V P GR+ HT ++N + ++GG
Sbjct: 262 RSWSQLEVCGQRPQGRFSHTAVAMNTD-IAIYGG 294
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 526 PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWG 585
PP R H A G + +FGG GLH L L + E +W ++ GQ P
Sbjct: 19 PPERWGHSACFFE-GFVYVFGGCCGGLHFGDVLKL---NVETMAWSLVATTGQCPGTRDS 74
Query: 586 HSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
H +V G R+LV GG G V N+LH L L + +
Sbjct: 75 HGAALV-GHRMLVFGGTNGGRKV-NDLHVLDLRTGE 108
>gi|448407766|ref|ZP_21573961.1| light and redox sensing histidine kinase [Halosimplex carlsbadense
2-9-1]
gi|445675016|gb|ELZ27551.1| light and redox sensing histidine kinase [Halosimplex carlsbadense
2-9-1]
Length = 972
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 13/131 (9%)
Query: 34 GGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCR 93
GG D EL + P +AD D PI+Y N+ FE TGY EVLGRNCR
Sbjct: 249 GGQADGELETRA----MNEAPVGITIADPTRDDNPIVYANERFEQLTGYDEAEVLGRNCR 304
Query: 94 FLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDD 153
FLQ D + PV +R ++ G EL N++KDGT NR+ +AP+R
Sbjct: 305 FLQGADTAGE-------PVAA--MRSAIDAGEPVTVELRNYRKDGTEFWNRVSIAPVRSA 355
Query: 154 DGTVTHIIGIQ 164
+GT+T+ +G Q
Sbjct: 356 EGTITNYVGFQ 366
>gi|440634835|gb|ELR04754.1| hypothetical protein GMDG_06982 [Geomyces destructans 20631-21]
Length = 942
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
+FVV DA PD PIIY +++F TGY +EV +NCRFLQ D ++++ + VD
Sbjct: 424 AFVVCDATMPDNPIIYASEIFSRLTGYNKNEVWMKNCRFLQSPDGKSKKGQKRKYVDDAA 483
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++R + + E Q L+N++K G P N L + PI D V + +G QI
Sbjct: 484 VYALKRGVLKRREVQCSLINYRKGGQPFTNLLTMVPITWDTEEVKYYVGFQI 535
>gi|427714672|ref|YP_007063296.1| PAS domain-containing protein [Synechococcus sp. PCC 6312]
gi|427378801|gb|AFY62753.1| PAS domain S-box [Synechococcus sp. PCC 6312]
Length = 1154
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ D PD+P+IY N FE TGYR EV+GRNCRFLQ D + P +
Sbjct: 330 IVITDHRRPDYPVIYANPAFEKITGYRVSEVIGRNCRFLQGDD----QNQP-----GLQA 380
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R +++G + L N +K+GT N L ++PI DD G +TH IGIQ
Sbjct: 381 LRHAIKKGQSGRVVLKNIRKNGTVFWNELSISPIYDDQGQLTHYIGIQ 428
>gi|323450917|gb|EGB06796.1| hypothetical protein AURANDRAFT_28731 [Aureococcus anophagefferens]
Length = 143
Score = 86.7 bits (213), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FVV + PD PI++ ++ F TGY D+V+GRNCRFLQ P DP VS
Sbjct: 11 AFVVTNPELPDNPIVWTSEAFLQMTGYDRDDVIGRNCRFLQ---------GPRTDPRQVS 61
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR + + E +LN++KDGT NR +AP+RD +G VT +G+Q
Sbjct: 62 VIRDAVYKEHEASVTILNYRKDGTTFWNRFFVAPLRDAEGKVTFFVGVQ 110
>gi|403412046|emb|CCL98746.1| predicted protein [Fibroporia radiculosa]
Length = 881
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 72/133 (54%), Gaps = 14/133 (10%)
Query: 45 PGLLFYPTTPT-SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ 103
P ++ P T SFVV+D D PI+YV+ F TGY E+LGRNCRFLQ D R Q
Sbjct: 216 PKIVLGPVDMTCSFVVSDVRRYDSPIVYVSPTFCKLTGYEEHEILGRNCRFLQSPDGRVQ 275
Query: 104 ----RRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-------D 152
RRH P V +++CL +G E Q ++N++K GT +N + + PI D
Sbjct: 276 RGELRRH--TSPEAVMNLKQCLAQGKECQTSIVNYRKGGTAFINLVTVVPITGGVNNGPD 333
Query: 153 DDGTVTHIIGIQI 165
+ + + +G Q+
Sbjct: 334 EIDDIVYHVGFQV 346
>gi|302790163|ref|XP_002976849.1| hypothetical protein SELMODRAFT_443359 [Selaginella moellendorffii]
gi|300155327|gb|EFJ21959.1| hypothetical protein SELMODRAFT_443359 [Selaginella moellendorffii]
Length = 394
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PI+Y + F TGY DEVLGRNCRFLQ RD D +
Sbjct: 50 NFVLCDPGLPDHPIVYASDGFLEMTGYSRDEVLGRNCRFLQGRD---------TDKRAIV 100
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPI-RDDDGTVTHIIGIQIFSEAKI 171
EIR + E + Q ++LN+ K G P N LAP+ DG V H +G+Q+ +K+
Sbjct: 101 EIREAIREERDCQIKILNYTKAGKPFWNLFHLAPVFSQQDGRVVHFVGVQLPISSKV 157
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 47 LLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRH 106
LL P SFV+ D PD PI++ + F TGY +EV+GRNCRFLQ
Sbjct: 241 LLALTRIPHSFVLTDPHLPDMPIVHASLEFLELTGYTREEVIGRNCRFLQ---------G 291
Query: 107 PLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
P D + E+R + EG +LN++K+ P N L ++P+R+ G V + GIQ+
Sbjct: 292 PDTDLAPIEELRSSISEGQTCTIRILNYRKNKEPFWNSLHISPVRNSSGKVAYYAGIQV 350
>gi|164427047|ref|XP_959777.2| hypothetical protein NCU02356 [Neurospora crassa OR74A]
gi|157071583|gb|EAA30541.2| hypothetical protein NCU02356 [Neurospora crassa OR74A]
Length = 1131
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD--PRAQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++GRNCRFLQ D A + V+
Sbjct: 392 AFVVCDVTLNDCPIIYVSDNFQNLTGYSRHEIVGRNCRFLQAPDGNVEAGTKREFVENNA 451
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 452 VYTLKKTIAEGQEIQQSLINYRKGGKPFLNLLTMIPIPWDTEEIRYFIGFQI 503
>gi|168702193|ref|ZP_02734470.1| multi-sensor hybrid histidine kinase [Gemmata obscuriglobus UQM
2246]
Length = 823
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 9/107 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
FV+ D PD P+IYV+ FE TG+ A +V GRNCRFLQ RD D V
Sbjct: 335 FVICDFLAPDRPLIYVSPGFERITGWAAADVTGRNCRFLQGRD---------TDRAAVDR 385
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
+R G ELLN+++DGT N L ++P+RD+ G VTH +G+
Sbjct: 386 LRAAQAAGEACAIELLNYRRDGTAFWNGLSVSPVRDETGRVTHYVGV 432
>gi|168702420|ref|ZP_02734697.1| multi-sensor hybrid histidine kinase [Gemmata obscuriglobus UQM
2246]
Length = 1013
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+++DA PD P+++ + FE TGY A EV+GRN LQ RD A+ V++
Sbjct: 516 ILISDAEHPDHPVVFASPGFERLTGYTAAEVMGRNWHLLQGRDTSAE---------AVAQ 566
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R + G+ ELLN+KKDG+P + L ++P+RD G +TH IG+
Sbjct: 567 VRAAVRAGVPCAVELLNYKKDGSPFWSELSISPVRDATGRLTHFIGVH 614
>gi|403343929|gb|EJY71300.1| Kelch repeat-containing protein [Oxytricha trifallax]
Length = 570
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 27/261 (10%)
Query: 256 VCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAG 315
V N GR +L + T++ G LA E ++ + + S F+
Sbjct: 166 VYMNDMGRLNLDSLNICTQEQFTGNLAVEFEQVQIQQDLSNFMNFPTQRSAHAFTLIDRK 225
Query: 316 NRLV------LFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSS-----PPGRWGHTLS 364
N L +FGG N+ +D + ++L +W RV+ P R HT+
Sbjct: 226 NTLKQSTQFWIFGG-AFNINFFNDMYYMDLQEF--QWHRVNYDEQRSVALPTPRAAHTMV 282
Query: 365 --SLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS-GGAPPLPRSWHSSCIIEGS 421
+N S L +FGG + ND+FV DLD+ +W+ S GG P PR+ HS+ I+
Sbjct: 283 YFEINRS-LYIFGGGNSHQMFNDLFVFDLDSN--SWLMPSIGGEFPSPRAGHSATKIDEK 339
Query: 422 KLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI-PTSWSPPSRLGHSLSVYGRTKVLMFG 480
+ GG D + +DT+L ++ + W ++ P PP R GH+ + ++K+L+FG
Sbjct: 340 YFCIFGGG-DLTTVFNDTFLFNIENN--TWIKVKPIGEQPPKRCGHTATRVNQSKILIFG 396
Query: 481 GLAKSGHLRLRSGESYTIDLG 501
G G L + Y++D+
Sbjct: 397 GGDVDGEL---FSDLYSLDIS 414
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 119/303 (39%), Gaps = 46/303 (15%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGV-NMQPMDDTFVLNLDAAN-------- 343
W+ G R S L +FGG + N M+D LNLD+ N
Sbjct: 129 WKIIKNNGCFSIERSGHSCFINDGYLYVFGGLFIHNGVYMNDMGRLNLDSLNICTQEQFT 188
Query: 344 ----PEWRRVSVKSS-------PPGRWGHTLSSLN-------GSWLVVFGGCGRQGLLND 385
E+ +V ++ P R H + ++ + +FGG ND
Sbjct: 189 GNLAVEFEQVQIQQDLSNFMNFPTQRSAHAFTLIDRKNTLKQSTQFWIFGGAFNINFFND 248
Query: 386 VFVLDLDAKQ---PTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLL 442
++ +DL Q + E A P PR+ H+ E ++ + G ++ + +D ++
Sbjct: 249 MYYMDLQEFQWHRVNYDEQRSVALPTPRAAHTMVYFEINRSLYIFGGGNSHQMFNDLFVF 308
Query: 443 DLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD 502
DL ++ + I + P R GHS + +FGG G L +++ ++
Sbjct: 309 DLDSNSWLMPSIGGEFPSP-RAGHSATKIDEKYFCIFGG----GDLTTVFNDTFLFNI-- 361
Query: 503 EEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD 562
E W +++ +G Q PP R H A + +I+IFGG S L+ LD
Sbjct: 362 ENNTWIKVKP-----IGEQ----PPKRCGHTATRVNQSKILIFGGGDVDGELFSDLYSLD 412
Query: 563 PSE 565
S+
Sbjct: 413 ISQ 415
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 106/280 (37%), Gaps = 44/280 (15%)
Query: 351 VKSSPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPTW-IEVSGGAPPL 408
VK P GR H S N L++ GG Q ++ +L D Q W I + G +
Sbjct: 82 VKRGPNGRNTHQ-SVYNDGKLIIIGGADEFQKYKSNPDLLVYDTVQSNWKIIKNNGCFSI 140
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLT-----TDKPMWREIPTSWS---- 459
RS HS I +G V G GV ++D L+L T + + +
Sbjct: 141 ERSGHSCFINDGYLYVFGGLFIHNGVYMNDMGRLNLDSLNICTQEQFTGNLAVEFEQVQI 200
Query: 460 ----------PPSRLGHSLSVYGRTKVL-------MFGGLAKSGHLRLRSGESYTIDLGD 502
P R H+ ++ R L +FGG + Y +DL
Sbjct: 201 QQDLSNFMNFPTQRSAHAFTLIDRKNTLKQSTQFWIFGGAFNINFF----NDMYYMDL-- 254
Query: 503 EEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGR-IIIFGGSIAGLHSPSQLFLL 561
+E QW ++ + +S +P PR H V R + IFGG + + LF+
Sbjct: 255 QEFQWHRVNYDE-----QRSVALPTPRAAHTMVYFEINRSLYIFGGGNSH-QMFNDLFVF 308
Query: 562 DPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 601
D + SW + ++ G+ P GHS + + GG
Sbjct: 309 DL--DSNSWLMPSIGGEFPSPRAGHSATKIDEKYFCIFGG 346
>gi|336253112|ref|YP_004596219.1| PAS/PAC sensor protein [Halopiger xanaduensis SH-6]
gi|335337101|gb|AEH36340.1| putative PAS/PAC sensor protein [Halopiger xanaduensis SH-6]
Length = 658
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++YVN+ ++ TGY DEV+GRNCRFLQ D +P
Sbjct: 143 PVGITISDPDREDNPLVYVNEAYQEITGYSYDEVVGRNCRFLQGGDS---------NPDA 193
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+ ++E EL N++KDGT N + +AP+R+D G VT+ +G Q
Sbjct: 194 IAEMAAAIDEDRPVTVELENYRKDGTEFWNEVTIAPVRNDAGEVTNYVGFQ 244
>gi|73760084|dbj|BAE20160.1| phototropin [Mougeotia scalaris]
gi|73760094|dbj|BAE20165.1| phototropin [Mougeotia scalaris]
Length = 839
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 72/121 (59%), Gaps = 13/121 (10%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ DA P+ P+++ ++ F TGY A EV+G+NCRFLQ P D V
Sbjct: 48 TFVMCDATKPNTPVMFASEGFYRMTGYSAKEVIGKNCRFLQ---------GPETDRSEVE 98
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI----FSEAKI 171
++++ L +G + G LLN++KDG+ N L ++P++DD G V IG+Q+ F+E K
Sbjct: 99 KLKQALLDGQSWCGRLLNYRKDGSSFWNLLTVSPVKDDSGRVVKFIGMQVEVSKFTEGKN 158
Query: 172 D 172
D
Sbjct: 159 D 159
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E++GRNCRFLQ +D D V+
Sbjct: 291 NFVITDPRLPDNPIIFASDDFLELTEYTREEIIGRNCRFLQGKD---------TDKETVA 341
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ + +LLN+ K G P N L +RD G + + IG+Q+
Sbjct: 342 KIRHAIDNHQDITVQLLNYTKSGKPFWNLFHLQAVRDTKGRLQYFIGVQL 391
>gi|186682678|ref|YP_001865874.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
gi|186465130|gb|ACC80931.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
Length = 1403
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 65/112 (58%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T ++ADA P PIIYVN FE TGY A +V+G+NCRFLQ R + P
Sbjct: 238 TSNGIIIADARLPYNPIIYVNCAFEKITGYTAADVIGQNCRFLQ----RTDSQQP----- 288
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+R L+ G + L N+ KDG N L ++PI D++G ++H IGIQ
Sbjct: 289 ALNELRSSLQAGTSCKVILRNYSKDGVLFWNELCISPIHDENGKLSHFIGIQ 340
>gi|384494796|gb|EIE85287.1| hypothetical protein RO3G_09997 [Rhizopus delemar RA 99-880]
Length = 726
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ--RRHPLVDPVV 113
SFVV DA DFP++Y + +FE TGY EV+GRNCR LQ D R D
Sbjct: 135 SFVVVDARQYDFPLVYASPMFERLTGYAPSEVIGRNCRLLQAPDGNVAMGSRRKYTDNTT 194
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V I+ + +G E Q ++N++K G P VN L + PI + + + +G+Q+
Sbjct: 195 VYHIKTHIVQGKESQSSIINYRKTGQPFVNLLTVIPITWESDEIDYFVGLQV 246
>gi|312195261|ref|YP_004015322.1| PAS/PAC sensor protein [Frankia sp. EuI1c]
gi|311226597|gb|ADP79452.1| putative PAS/PAC sensor protein [Frankia sp. EuI1c]
Length = 628
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SF +AD PD P+I+VN F TGY E +GRNCRFLQ PR+ R +
Sbjct: 39 SFTIADPHQPDTPLIWVNDAFTRTTGYPFAEAVGRNCRFLQ--GPRSDR-------ATAA 89
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
++ + E + ELLN++KDG+ N + LAP+ D DG +TH +G+Q A+++
Sbjct: 90 KLGDAVRERRPARVELLNYRKDGSTFWNEIVLAPVFDRDGRLTHFVGVQDDVTARVE 146
>gi|293334253|ref|NP_001170647.1| uncharacterized protein LOC100384701 [Zea mays]
gi|238006618|gb|ACR34344.1| unknown [Zea mays]
gi|413947978|gb|AFW80627.1| hypothetical protein ZEAMMB73_821757 [Zea mays]
Length = 625
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 144/333 (43%), Gaps = 32/333 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W V G P R SAC + +FGG + D V+ LD W ++
Sbjct: 9 WLYPKVVGFNPPERWGHSACFFEGVVYVFGGCCGGLHFSD---VVTLDVETMAWSALATT 65
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSW 412
PG ++L G ++VFGG +N++ VLDL ++ + + G AP PR
Sbjct: 66 GQRPGTRDSHGAALVGHRMLVFGGTNGGKKVNELHVLDLRTREWSRPQCRGAAPS-PRES 124
Query: 413 HSSCIIEGSKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
HS ++ G +LVV GG + G LSD ++LD+ T E +P R HS
Sbjct: 125 HSVTVVGGDRLVVFGGSGEGEGNYLSDVHVLDVPTMTWSTPEAIRGGAPAPRDSHSAVAV 184
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESYT--IDLGD-EEPQWKQLECNAFTGVGSQSAVVPPP 528
G ++ +FGG G+ Y +D+ D + W + + P
Sbjct: 185 G-ARLFVFGG---------DCGDRYHGGVDVLDVDTMAWSRFPVKGAS---------PGV 225
Query: 529 RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHST 588
R H A+S+ +I I GG + S +++LD + SW L V GQ P+ + H T
Sbjct: 226 RAGHAALSV-GSKIYIIGG-VGDKQYYSDVWVLDVANR--SWSQLEVSGQRPQGRFSH-T 280
Query: 589 CVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
VV + + GG +E LNEL L L S+
Sbjct: 281 AVVMNNDIAIYGGCGEDERPLNELLILQLGSEH 313
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 121/288 (42%), Gaps = 28/288 (9%)
Query: 288 LEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWR 347
+E + W G +R + A G+R+++FGG + +++ VL+L EW
Sbjct: 54 VETMAWSALATTGQRPGTRDSHGAALVGHRMLVFGGTNGGKK-VNELHVLDLRTR--EWS 110
Query: 348 RVSVKSSPPG-RWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQPTWIEVSGG 404
R + + P R H+++ + G LVVFGG G L+DV VLD+ + E G
Sbjct: 111 RPQCRGAAPSPRESHSVTVVGGDRLVVFGGSGEGEGNYLSDVHVLDVPTMTWSTPEAIRG 170
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS-WSPPSR 463
P PR HS+ + V G C D +LD+ D W P SP R
Sbjct: 171 GAPAPRDSHSAVAVGARLFVFGGDCGDR--YHGGVDVLDV--DTMAWSRFPVKGASPGVR 226
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSA 523
GH+ G +K+ + GG+ + + + +D+ + W QLE S
Sbjct: 227 AGHAALSVG-SKIYIIGGVGDKQYY----SDVWVLDVANRS--WSQLEV---------SG 270
Query: 524 VVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
P R H AV M I I+GG ++L +L E P+ R
Sbjct: 271 QRPQGRFSHTAVVM-NNDIAIYGGCGEDERPLNELLILQLGSEHPNGR 317
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++ + W +F V+GA R +A + G+++ + GG G + Q D +V LD AN
Sbjct: 204 DVLDVDTMAWSRFPVKGASPGVRAGHAALSVGSKIYIIGGVG-DKQYYSDVWV--LDVAN 260
Query: 344 PEWRRVSVKSS-PPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ V P GR+ HT +N + ++GGCG + LN++ +L L ++ P
Sbjct: 261 RSWSQLEVSGQRPQGRFSHTAVVMNND-IAIYGGCGEDERPLNELLILQLGSEHPN 315
>gi|367047307|ref|XP_003654033.1| hypothetical protein THITE_2049533 [Thielavia terrestris NRRL 8126]
gi|347001296|gb|AEO67697.1| hypothetical protein THITE_2049533 [Thielavia terrestris NRRL 8126]
Length = 1033
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD--PRAQRRHPLVDPVV 113
SF+V D D PIIY + F+ TGY E++G+NCRFLQ D A R V
Sbjct: 328 SFIVCDLTLNDCPIIYASDNFQNLTGYNRHEIVGKNCRFLQSPDGVVEAGSRREFVANDA 387
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
V +++ L EG E Q L+N++K G P +N L L PI D+ + + IG Q IDL
Sbjct: 388 VFKLKNALAEGREIQQSLINYRKGGKPFLNLLTLIPIPWDNDKMKYCIGFQ------IDL 441
Query: 174 NHVSYPVFKE-----NCNQQYDQSAQYFSGGHSPLSQHQDICGILQLS-DEVLAHNILSR 227
+ + + ++D QYF P S H + LS DEV +L +
Sbjct: 442 VECPDAISGQESGAMQVDYRHDDIGQYFFS--PPSSTHWEPKSGQSLSVDEV--STLLEQ 497
Query: 228 LTPRDVAS 235
L PR AS
Sbjct: 498 LNPRAPAS 505
>gi|342874002|gb|EGU76081.1| hypothetical protein FOXB_13404 [Fusarium oxysporum Fo5176]
Length = 360
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
SFVV D D PI+Y++ F+ TGY E LGRNCRFLQ D + +R P VD
Sbjct: 230 SFVVCDITLEDCPIVYISDSFQTLTGYSLHEALGRNCRFLQAPDGKVERGSTRPFVDVGA 289
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ ++E E Q ++N++K G P +N L + PI D + + +G QI
Sbjct: 290 VQTLKKNVQERRETQISMINYRKGGKPFLNYLSIIPIPWDTNEIRYYVGFQI 341
>gi|435845892|ref|YP_007308142.1| PAS domain S-box [Natronococcus occultus SP4]
gi|433672160|gb|AGB36352.1| PAS domain S-box [Natronococcus occultus SP4]
Length = 616
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++Y+N+ +E TGY ++V+GRNCR LQ D DP
Sbjct: 126 PVGITISDPSREDNPLVYINEAYEEITGYDYEDVVGRNCRLLQGEDS---------DPDA 176
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+R +EE E++N++KD T N + +AP+R+D G +TH +G Q
Sbjct: 177 VAEMRAGIEEERPVTVEIVNYRKDDTRFWNEVTIAPVRNDAGELTHYVGFQ 227
>gi|117956324|emb|CAJ13843.2| putative white-collar-1a protein [Mucor circinelloides]
Length = 649
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ--RRHPLVDPVV 113
SF+V DA D PI+Y + FE TGY A+E++GRNCRFLQ D + R D
Sbjct: 89 SFLVTDARQYDCPIVYCSPTFENLTGYLANEIVGRNCRFLQAPDGQVTCGSRRTYTDNQA 148
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++ + + E Q ++N++K G P VN + + PI +D+ V +G+Q+
Sbjct: 149 VYHLKAQMLQNKEHQASIINYRKGGQPFVNLITVIPICNDNNEVAFFVGLQV 200
>gi|219118462|ref|XP_002180003.1| hypothetical protein PHATRDRAFT_51933 [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217408260|gb|EEC48194.1| hypothetical protein PHATRDRAFT_51933 [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 142
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+F ++D PD PI+YV++ F TGY D+VLGRNCRFLQ P D V
Sbjct: 10 NFAISDPTLPDNPIVYVSQGFLDLTGYTLDQVLGRNCRFLQ---------GPGTDQSAVE 60
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR+ + EG++ LLN+K DGTP N+ +A +RD + V + +G+Q
Sbjct: 61 VIRKGITEGVDTSVCLLNYKADGTPFWNQFFVASLRDAENNVVNHVGVQ 109
>gi|145487538|ref|XP_001429774.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396868|emb|CAK62376.1| unnamed protein product [Paramecium tetraurelia]
Length = 771
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 129/256 (50%), Gaps = 25/256 (9%)
Query: 273 TKKLGWGRLARELTTLEAVC--WRKFTVRGAV-EPSRCNFSACAAGNRLVLFGGE-GVNM 328
T G R A ++ +L+ + W V+G V +P + + C N++V++GGE G
Sbjct: 45 TNSTGIYRFAEDIFSLDILTKQWNSVKVQGTVPKPRAAHAAVCIEINQIVIYGGETGGGS 104
Query: 329 QPMDDTFVLNLDAANP--EWRRVSVKSSPPGR-WGHTLSSLNGSWLVVFGGCGRQGLLND 385
DD ++L+L +A+ EW VSV PGR +GHTL+ + +L++FGG Q +ND
Sbjct: 105 LASDDLYLLDLRSADDIGEWSVVSVVGITPGRRYGHTLT-YSKPFLIIFGGSTGQEPIND 163
Query: 386 VFVLDLDAKQPTWIEVS-GGAPPLPRSWHSSCI----IEGSKLVVSGGCTDAGVLLSDTY 440
+ ++++ W+++ P+ R +HS+ + + L++ GG + L+DT+
Sbjct: 164 CWCINVEKNPFVWVKIECQSEQPMARVYHSASVCTNDVANETLIIFGGRSKDQQALNDTW 223
Query: 441 LLDLTTD-KPMWREI---PTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESY 496
L D + W I P P R H+ S++ + + + GG K+G+L E
Sbjct: 224 ALKRHRDGRWDWMRIIYKPDKEQPKGRYQHT-SLFFYSMLFIIGG--KTGNL----NEML 276
Query: 497 TIDLGDEEPQ-WKQLE 511
TI++ D + Q W + +
Sbjct: 277 TINVFDTQTQEWSKFK 292
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 132/289 (45%), Gaps = 41/289 (14%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGG--CGRQGLLN---------DVFVLDLDAKQPTWIEVSG 403
P R+GHT++ + ++FGG C Q N D+F LD+ KQ ++V G
Sbjct: 15 PSERFGHTMTYIEKGKAILFGGKECQIQDTTNSTGIYRFAEDIFSLDILTKQWNSVKVQG 74
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDT-YLLDLTT--DKPMWREIP-TSWS 459
P PR+ H++ IE +++V+ GG T G L SD YLLDL + D W + +
Sbjct: 75 TVPK-PRAAHAAVCIEINQIVIYGGETGGGSLASDDLYLLDLRSADDIGEWSVVSVVGIT 133
Query: 460 PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVG 519
P R GH+L+ Y + +++FGG + + + I++ W ++EC +
Sbjct: 134 PGRRYGHTLT-YSKPFLIIFGGSTGQEPI----NDCWCINVEKNPFVWVKIECQSEQ--- 185
Query: 520 SQSAVVPPPRLDHVAV----SMPCGRIIIFGGSIAGLHSPSQLFLLDPSEE-KPSW-RIL 573
P R+ H A + +IIFGG + + + L + + W RI+
Sbjct: 186 ------PMARVYHSASVCTNDVANETLIIFGGRSKDQQALNDTWALKRHRDGRWDWMRII 239
Query: 574 NVPG-QPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
P + PK + H T + + + ++GG TG LNE+ + + Q
Sbjct: 240 YKPDKEQPKGRYQH-TSLFFYSMLFIIGGKTGN---LNEMLTINVFDTQ 284
>gi|398836637|ref|ZP_10593969.1| PAS domain S-box [Herbaspirillum sp. YR522]
gi|398211118|gb|EJM97741.1| PAS domain S-box [Herbaspirillum sp. YR522]
Length = 549
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T +V+D PD PI++VN F TGY DEV+GRNCRFLQ P D
Sbjct: 47 TRMPMIVSDPRRPDTPIVFVNDAFINMTGYTRDEVIGRNCRFLQ---------GPETDRA 97
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV +I L E E E+LN++KDG+ N L ++P+ D DG + + G Q+
Sbjct: 98 VVRQIGSALAERREIATEILNYRKDGSTFWNALFISPVYDRDGELVYFFGSQL 150
>gi|302759895|ref|XP_002963370.1| hypothetical protein SELMODRAFT_79877 [Selaginella moellendorffii]
gi|300168638|gb|EFJ35241.1| hypothetical protein SELMODRAFT_79877 [Selaginella moellendorffii]
Length = 320
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 21/232 (9%)
Query: 288 LEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWR 347
L W +RG + +R + AAGN + +FGG Q +++ F + D EWR
Sbjct: 54 LRQRSWAVAELRGEIPSARVGVAMAAAGNTIFVFGGRDEQHQELNEFF--SFDTVTGEWR 111
Query: 348 RVSVK-SSPPGRWGHTLSS-LNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGA 405
+S + +SPP R HTL++ G + FGGCG+ G LND++V ++++ TW ++ +
Sbjct: 112 LLSAEETSPPHRSYHTLAADKQGKNIYTFGGCGKAGRLNDLWVFNIESS--TWKKLPESS 169
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSR-L 464
PR ++ G+ V+ G C D L+D + D+ + W E+ S S + +
Sbjct: 170 TLTPRGGPGLAVVNGAVWVIFGFCGDE---LTDVHRFDIASQ--TWEEVQVSCSSLQKPI 224
Query: 465 GHSLSVYGRT----KVLMFGGL---AKSGHLRLRSGESYTIDLGDEEPQWKQ 509
G SV+G + K+ ++GG + GHL + + L E+ W++
Sbjct: 225 GR--SVFGTSCVGNKIFLYGGEVDPSDLGHLGAGAFTDELLVLDTEKLAWEK 274
>gi|344942477|ref|ZP_08781764.1| multi-sensor hybrid histidine kinase [Methylobacter tundripaludum
SV96]
gi|344259764|gb|EGW20036.1| multi-sensor hybrid histidine kinase [Methylobacter tundripaludum
SV96]
Length = 1278
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 63/112 (56%), Gaps = 9/112 (8%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ +S + D P P+IYVN FE TGY DE +GRN RFLQ ++ D
Sbjct: 518 ASASSISMVDVNKPGMPLIYVNPAFERITGYSRDEAIGRNPRFLQGKE---------TDQ 568
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
V EIR L+EG L N++K+GTP N LR+AP+ D+ G ++H IGI
Sbjct: 569 PGVDEIRAVLQEGRAGGALLHNYRKNGTPYWNDLRIAPVHDEQGRLSHFIGI 620
>gi|440792429|gb|ELR13651.1| kelch repeatcontaining protein [Acanthamoeba castellanii str. Neff]
Length = 311
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 121/274 (44%), Gaps = 52/274 (18%)
Query: 289 EAVCWRKFTVRGAVE--PSRCNFSACAAGNRLVLF---GGEGVNMQPMDDTFVLNLDAAN 343
+ W K VRG+ E P R + SA N +F GG+G N D F+LN
Sbjct: 49 DTFFWYKPEVRGSAEFGPHRAH-SATLVQNGCDIFVFGGGDGPNY--FDTLFILNTKTM- 104
Query: 344 PEWRRVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS 402
W + V + PG R H+ ++L G L +FGG + LND+F+LD D EV
Sbjct: 105 -AWSQPKVTGTGPGPRRAHS-ATLVGKDLYIFGGGDGRKALNDIFILDTDLLAWRNCEVK 162
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS--- 459
G PP PR +H+SC+++ +K++V GG +D SD + D + ++WS
Sbjct: 163 GDVPP-PRGYHASCLLDNNKILVYGG-SDGQECFSDVAIFD---------TVSSTWSKQK 211
Query: 460 ---PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTID---LGDEEPQWKQLECN 513
P RLGH++S G T V FGG +G Y + L +W L
Sbjct: 212 VINPKPRLGHTVSAIGNT-VFAFGG---------HNGTDYVNELDVLSVRGQEWTSLP-- 259
Query: 514 AFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG 547
+ P PR H A R+ ++GG
Sbjct: 260 -------HTGTSPQPRGYHTATYYDS-RLFVYGG 285
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 115/271 (42%), Gaps = 29/271 (10%)
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSW 412
+ PPG HT + + GS L V GG N+V V D D EV G A P
Sbjct: 11 TKPPGVRSHTTTRV-GSKLFVIGGSASDDSFNNVTVFDADTFFWYKPEVRGSAEFGPHRA 69
Query: 413 HSSCIIE-GSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP-TSWSPPSRLGHSLSV 470
HS+ +++ G + V GG G DT L L T W + T P R HS ++
Sbjct: 70 HSATLVQNGCDIFVFGGGD--GPNYFDT-LFILNTKTMAWSQPKVTGTGPGPRRAHSATL 126
Query: 471 YGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRL 530
G+ + +FGG G R + + +D + W+ E VPPPR
Sbjct: 127 VGK-DLYIFGG----GDGRKALNDIFILDT--DLLAWRNCEVK---------GDVPPPRG 170
Query: 531 DHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCV 590
H + + +I+++GGS G S + + D +W V P+ GH+
Sbjct: 171 YHASCLLDNNKILVYGGS-DGQECFSDVAIFDTVSS--TWSKQKVINPKPRL--GHTVSA 225
Query: 591 VGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+G T V GGH G ++V NEL L + ++
Sbjct: 226 IGNT-VFAFGGHNGTDYV-NELDVLSVRGQE 254
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 11/198 (5%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
+ + W + V G R SA G L +FGG G + ++D F+L+ D WR
Sbjct: 102 KTMAWSQPKVTGTGPGPRRAHSATLVGKDLYIFGG-GDGRKALNDIFILDTDLL--AWRN 158
Query: 349 VSVKSS-PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPP 407
VK PP R H L+ + ++V+GG Q +DV + D TW + P
Sbjct: 159 CEVKGDVPPPRGYHASCLLDNNKILVYGGSDGQECFSDVAI--FDTVSSTWSKQK-VINP 215
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHS 467
PR H+ I G+ + GG + L L+ W +P + + P G+
Sbjct: 216 KPRLGHTVSAI-GNTVFAFGGHNGTDYV---NELDVLSVRGQEWTSLPHTGTSPQPRGYH 271
Query: 468 LSVYGRTKVLMFGGLAKS 485
+ Y +++ ++GG S
Sbjct: 272 TATYYDSRLFVYGGFDNS 289
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
+ + WR V+G V P R ++C N +L G + D + D + W +
Sbjct: 152 DLLAWRNCEVKGDVPPPRGYHASCLLDNNKILVYGGSDGQECFSDVAI--FDTVSSTWSK 209
Query: 349 VSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPL 408
V + P R GHT+S++ G+ + FGG +N++ VL + ++ T + +G +P
Sbjct: 210 QKVINPKP-RLGHTVSAI-GNTVFAFGGHNGTDYVNELDVLSVRGQEWTSLPHTGTSPQ- 266
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLT 445
PR +H++ + S+L V GG D + +LDL+
Sbjct: 267 PRGYHTATYYD-SRLFVYGGF-DNSKCFDEITVLDLS 301
>gi|213403356|ref|XP_002172450.1| tip elongation aberrant protein [Schizosaccharomyces japonicus
yFS275]
gi|212000497|gb|EEB06157.1| tip elongation aberrant protein [Schizosaccharomyces japonicus
yFS275]
Length = 1161
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 135/283 (47%), Gaps = 25/283 (8%)
Query: 346 WRRVSVKSSPP--GRWGHTLSSL--NGSWLVVFGG-CGRQGLLNDVFVLDLDAKQPTWIE 400
W +++V+ + R+GH+ + G + +FGG G+ G ND +VL+++ Q +
Sbjct: 61 WSKLTVRGNANVLPRYGHSSHPVAEGGQDIYIFGGMAGKNGEKNDFWVLNVNTSQFNALR 120
Query: 401 VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMW-REIPTSWS 459
S G P PR H+S +I + +V G +A + D L L T +W R + +
Sbjct: 121 -SLGEVPSPRLGHASVLIGNAFIVFGGFVRNASMERQDNALYLLNTTSLVWQRALASGAR 179
Query: 460 PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTID-LGDEEPQWKQLECNAFTGV 518
P +R GH+L+ G TK+ +FGG + + + +D L + +W+ + T V
Sbjct: 180 PSARYGHTLNTLG-TKICIFGGQLR--NYFFNDLIFFDLDNLNTPDSRWELV-----TAV 231
Query: 519 GSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ 578
PP R +H+AVS ++ +FGG+ G+ + L+ P ++ +W + G
Sbjct: 232 NDS----PPARANHIAVSF-AEKLYVFGGT-NGVQCFNDLWCFHP--KQSAWSRVEAFGV 283
Query: 579 PPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
P GHS VV + V GG T E LN+L ++KQ
Sbjct: 284 YPTPREGHSAAVVNDV-LYVFGGRTHEGAFLNDLMAFKFSTKQ 325
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTF--VLNLDAA 342
L ++ W++ GA +R + G ++ +FGG+ N D F + NL+
Sbjct: 162 LLNTTSLVWQRALASGARPSARYGHTLNTLGTKICIFGGQLRNYFFNDLIFFDLDNLNTP 221
Query: 343 NPEWRRVS-VKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV 401
+ W V+ V SPP R H S L VFGG ND++ KQ W V
Sbjct: 222 DSRWELVTAVNDSPPARANHIAVSF-AEKLYVFGGTNGVQCFNDLWC--FHPKQSAWSRV 278
Query: 402 SG-GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMW---REIPTS 457
G P PR HS+ ++ L V GG T G L+D +T + W E+P
Sbjct: 279 EAFGVYPTPREGHSAAVV-NDVLYVFGGRTHEGAFLNDLMAFKFSTKQ--WYKVSELP-- 333
Query: 458 WSPPSRLGHSLSVYGRTKVLMFGG 481
++P R H+L G V++ GG
Sbjct: 334 FTPSPRANHTLCAAG-AHVVLIGG 356
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 103/256 (40%), Gaps = 27/256 (10%)
Query: 300 GAVEPSRCNFSACAAGNRLVLFGG--EGVNMQPMDDTFVLNLDAANPEWRR-VSVKSSPP 356
G V R ++ GN ++FGG +M+ D+ L L+ + W+R ++ + P
Sbjct: 123 GEVPSPRLGHASVLIGNAFIVFGGFVRNASMERQDNALYL-LNTTSLVWQRALASGARPS 181
Query: 357 GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLD---AKQPTWIEVSGGAPPLPRSWH 413
R+GHTL++L G+ + +FGG R ND+ DLD W V+ P +
Sbjct: 182 ARYGHTLNTL-GTKICIFGGQLRNYFFNDLIFFDLDNLNTPDSRWELVTAVNDSPPARAN 240
Query: 414 SSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPT-SWSPPSRLGHSLSVYG 472
+ KL V GG T+ +D + + W + P R GHS +V
Sbjct: 241 HIAVSFAEKLYVFGG-TNGVQCFNDLWCFH--PKQSAWSRVEAFGVYPTPREGHSAAVVN 297
Query: 473 RTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDH 532
+ +FGG G L ++ QW ++ FT P PR +H
Sbjct: 298 DV-LYVFGGRTHEGAF-LNDLMAFKFSTK----QWYKVSELPFT---------PSPRANH 342
Query: 533 VAVSMPCGRIIIFGGS 548
+ ++I G S
Sbjct: 343 TLCAAGAHVVLIGGQS 358
>gi|428225933|ref|YP_007110030.1| PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase [Geitlerinema sp. PCC 7407]
gi|427985834|gb|AFY66978.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Geitlerinema sp. PCC 7407]
Length = 1135
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 38 DTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQY 97
D+ L L ++ + VV D PD P+IYVN FE TGY ++VLG+NCRFLQ
Sbjct: 422 DSRLHLMERVI--AASSNGIVVTDPTQPDNPVIYVNPAFEGITGYSGEDVLGKNCRFLQ- 478
Query: 98 RDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
P D V E+RR + E E L N +KDG N L +AP+ D G +
Sbjct: 479 --------GPDRDQAGVEELRRAIREQRECHVVLHNTRKDGVDFWNELFVAPVFDRQGYL 530
Query: 158 THIIGIQ 164
TH +GIQ
Sbjct: 531 THFVGIQ 537
>gi|412990839|emb|CCO18211.1| multi-sensor hybrid histidine kinase [Bathycoccus prasinos]
Length = 1058
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+AD P P+++ N+ F TGY DE +G+NCRFLQ P +P VV +
Sbjct: 131 VTIADFTHPLQPLVFANQGFTEITGYTVDETVGKNCRFLQ---------GPETEPEVVRK 181
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
I+ + G+ +L N+KK+G +N L L PIR+++ VTH +GIQ
Sbjct: 182 IKYAVMNGLSITCQLKNYKKNGEMFINNLSLKPIRNENSVVTHYVGIQ 229
>gi|448397476|ref|ZP_21569509.1| bacterio-opsin activator [Haloterrigena limicola JCM 13563]
gi|445672575|gb|ELZ25146.1| bacterio-opsin activator [Haloterrigena limicola JCM 13563]
Length = 633
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++YVN +E TGY DEV+GRNCRFLQ + D
Sbjct: 141 PVGVTISDPDLDDNPLVYVNDAYEEITGYEYDEVVGRNCRFLQGEES---------DENA 191
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+ ++E E+ N++KDGT N + +AP+RD+ G VTH +G Q
Sbjct: 192 IAEMAAAIDEDRPVTVEIKNYRKDGTEFWNEVTIAPVRDEAGRVTHYVGFQ 242
>gi|380496342|emb|CCF31796.1| GATA zinc finger [Colletotrichum higginsianum]
Length = 1050
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D + A + VD
Sbjct: 395 AFVVCDVSLNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQAPDGKVEAGSKREFVDDAS 454
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI DD V +G QI
Sbjct: 455 VYNLKKKIAEGREVQQSLINYRKGGKPFLNLLTMIPIPWDDPNEVRFFVGFQI 507
>gi|422645017|ref|ZP_16708154.1| histidine kinase [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330958568|gb|EGH58828.1| histidine kinase [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 534
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY +DE++G NCRFLQ P DP
Sbjct: 30 TTRMPMIVTDPNRPDNPIIFSNRAFLEMTGYSSDEIIGTNCRFLQ---------GPETDP 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV +R + E + E+LN++KDG+ N L ++P+ +D G++ + Q+
Sbjct: 81 SVVQSLRDAIRERTDISAEILNYRKDGSSFWNALFISPVYNDAGSLIYFFASQL 134
>gi|301103544|ref|XP_002900858.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101613|gb|EEY59665.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 447
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 18/207 (8%)
Query: 315 GNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPG-RWGHTLSSLNGSWLVV 373
G+ L GG ++ + + + LNL + EW ++ V +PP R+ ++L+ L G V+
Sbjct: 208 GDDLYAIGGT-IDGKFLTELHRLNLKSGEWEWEKLEVAGTPPSMRYWYSLTVLQGM-AVL 265
Query: 374 FGGCGRQGLLNDVFVLDLDAKQPTWIEVSG-GAPPLPRSWHSSCIIEGSKLVVSG--GCT 430
+GG G L+D F L D + PTW+E+ G P P S HS C+++ + G G
Sbjct: 266 YGGYGHPQRLSDTFALRFDTEIPTWMELQPRGDIPGPSSTHSVCVVKDRMYIFGGYDGKY 325
Query: 431 DAGVLLSDTYLLDLTTDKPM---WREIPTS-WSPPSRLGHSLSVYGRTKVLMFGGLAKSG 486
G L + + ++L T + + WR++ T P SR HS + G ++++++GG +G
Sbjct: 326 RRGHLFA--FEIELVTKERIDCVWRKVATQGHGPASRYTHSSASIG-SQLIVYGG--NTG 380
Query: 487 HLRLRSGESYTIDLGDEEPQWKQLECN 513
L+ G++Y +DLG + P WK +C+
Sbjct: 381 CLK---GDAYVLDLGSDVPTWKMAKCD 404
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 129/276 (46%), Gaps = 29/276 (10%)
Query: 338 NLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPT 397
L + EW V + PP + ++ G +L+V GG + LND+ +LDL A QP+
Sbjct: 125 ELAISQVEWETVRTEGIPPDKRYDCGLAIYGGFLIVVGGIVGKLRLNDLHMLDL-AAQPS 183
Query: 398 --WIE-VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI 454
WI+ + G PP + II G L GG D G L++ + L+L + + W ++
Sbjct: 184 SRWIKPLISGTPPQAGNLLQVFII-GDDLYAIGGTID-GKFLTELHRLNLKSGEWEWEKL 241
Query: 455 PTSWSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECN 513
+ +PPS R +SL+V VL +GG GH + R +++ + E P W +L+
Sbjct: 242 EVAGTPPSMRYWYSLTVLQGMAVL-YGGY---GHPQ-RLSDTFALRFDTEIPTWMELQPR 296
Query: 514 AFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLF-----LLDPSEEKP 568
+P P H +V + R+ IFGG G + LF L+
Sbjct: 297 ---------GDIPGPSSTH-SVCVVKDRMYIFGG-YDGKYRRGHLFAFEIELVTKERIDC 345
Query: 569 SWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTG 604
WR + G P + HS+ + G++++V GG+TG
Sbjct: 346 VWRKVATQGHGPASRYTHSSASI-GSQLIVYGGNTG 380
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 87/202 (43%), Gaps = 13/202 (6%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W K V G R +S VL+GG G + Q + DTF L D P W + +
Sbjct: 238 WEKLEVAGTPPSMRYWYSLTVLQGMAVLYGGYG-HPQRLSDTFALRFDTEIPTWMELQPR 296
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCG---RQGLLNDVFVLDLDAKQP---TWIEVSG-GA 405
PG + + +FGG R+G L F ++L K+ W +V+ G
Sbjct: 297 GDIPGPSSTHSVCVVKDRMYIFGGYDGKYRRGHLF-AFEIELVTKERIDCVWRKVATQGH 355
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLG 465
P R HSS I GS+L+V GG T G L D Y+LDL +D P W+ R
Sbjct: 356 GPASRYTHSSASI-GSQLIVYGGNT--GCLKGDAYVLDLGSDVPTWKMAKCDLPLIPRAW 412
Query: 466 HSLSVYGRTKVLMFGGLAKSGH 487
H VY + +FGG G+
Sbjct: 413 HRAVVY-NDAMYVFGGHTTEGY 433
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE--- 345
E W + RG + S C +R+ +FGG + F ++ E
Sbjct: 286 EIPTWMELQPRGDIPGPSSTHSVCVVKDRMYIFGGYDGKYR-RGHLFAFEIELVTKERID 344
Query: 346 --WRRVSVKS-SPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS 402
WR+V+ + P R+ H+ +S+ GS L+V+GG L D +VLDL + PTW
Sbjct: 345 CVWRKVATQGHGPASRYTHSSASI-GSQLIVYGG-NTGCLKGDAYVLDLGSDVPTWKMAK 402
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTD 431
P +PR+WH + + + V G T+
Sbjct: 403 CDLPLIPRAWHRAVVYNDAMYVFGGHTTE 431
>gi|302797635|ref|XP_002980578.1| hypothetical protein SELMODRAFT_112753 [Selaginella moellendorffii]
gi|300151584|gb|EFJ18229.1| hypothetical protein SELMODRAFT_112753 [Selaginella moellendorffii]
Length = 374
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PI+Y + F TGY DEVLGRNCRFLQ RD D +
Sbjct: 30 NFVLCDPGLPDHPIVYASDGFLEMTGYSRDEVLGRNCRFLQGRD---------TDKRAIV 80
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPI-RDDDGTVTHIIGIQIFSEAKI 171
EIR + E + Q ++LN+ K G P N LAP+ DG V H +G+Q+ +K+
Sbjct: 81 EIREAIREERDCQIKILNYTKAGKPFWNLFHLAPVFSQQDGRVVHFVGVQLPISSKL 137
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 47 LLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRH 106
LL P SFV+ D PD PI++ + F TGY +EV+GRNCRFLQ
Sbjct: 221 LLALTRIPHSFVLTDPHLPDMPIVHASLEFLELTGYTREEVIGRNCRFLQ---------G 271
Query: 107 PLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
P D + E+R + EG +LN++K+ P N L ++P+R+ G V + GIQ+
Sbjct: 272 PDTDLAPIEELRSSISEGQTCTVRILNYRKNKEPFWNSLHISPVRNSSGKVAYYAGIQV 330
>gi|310795021|gb|EFQ30482.1| GATA zinc finger [Glomerella graminicola M1.001]
Length = 1031
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D + A + VD
Sbjct: 378 AFVVCDVSLNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQAPDGKVEAGSKREFVDDAS 437
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI DD V +G QI
Sbjct: 438 VYNLKKKIAEGREVQQSLINYRKGGKPFLNLLTMIPIPWDDPNEVRFFVGFQI 490
>gi|224122912|ref|XP_002318947.1| predicted protein [Populus trichocarpa]
gi|222857323|gb|EEE94870.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 145/334 (43%), Gaps = 32/334 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W V G R SAC + + +FGG + D +LNLD W ++
Sbjct: 2 WLYPKVLGFNPSERWGHSACYSHGIVYVFGGCCGGLD-FSDVLMLNLDTM--LWNTMATT 58
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSW 412
PG + L G ++VFGG +ND+ VLDL K+ E G PP PR
Sbjct: 59 GQGPGPRDSHSAVLVGRQMIVFGGTNGSKKVNDLHVLDLGTKEWMSPECKGN-PPSPRES 117
Query: 413 HSSCIIEGSKLVVSGGCTDAGV-LLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
H++ +I K+++ GG + L+D ++LDL + + E+ S P +R HS
Sbjct: 118 HTATLIGDDKIMIFGGSGEGEANYLNDLHVLDLKSMRWTSPEVKGS-IPAARDSHSAVAI 176
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESYTID---LGDEEPQWKQLECNAFTGVGSQSAVVPPP 528
G +K+ ++GG G+ + D L + W +L P
Sbjct: 177 G-SKLFVYGG---------DRGDRFHGDVDVLDTDTMTWTKLAV---------QGSAPGV 217
Query: 529 RLDHVAVSMPCGRIIIFG-GSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHS 587
R H AV++ I ++ G + H + +++LD S SW L++ GQ P+ + H
Sbjct: 218 RAGHTAVNIGTKAINVYVIGGVGDKHYYNDVWVLDVS--ACSWTKLDISGQQPQGRFSH- 274
Query: 588 TCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
T VV + + GG +E LN+L L L ++
Sbjct: 275 TAVVTDLNIAIYGGCREDERPLNQLLVLQLEAEH 308
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 125/294 (42%), Gaps = 32/294 (10%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
+ L+ + W G R + SA G ++++FGG + ++D VL+L
Sbjct: 44 MLNLDTMLWNTMATTGQGPGPRDSHSAVLVGRQMIVFGGTN-GSKKVNDLHVLDL--GTK 100
Query: 345 EWRRVSVKSSPPG-RWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQPTWIEV 401
EW K +PP R HT + + +++FGG G LND+ VLDL + + T EV
Sbjct: 101 EWMSPECKGNPPSPRESHTATLIGDDKIMIFGGSGEGEANYLNDLHVLDLKSMRWTSPEV 160
Query: 402 SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAG-VLLSDTYLLDLTTDKPMWREIPTSWSP 460
G+ P R HS+ I GSKL V GG D G D +LD TD W ++ S
Sbjct: 161 K-GSIPAARDSHSAVAI-GSKLFVYGG--DRGDRFHGDVDVLD--TDTMTWTKLAVQGSA 214
Query: 461 PS-RLGHSLSVYGRT--KVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTG 517
P R GH+ G V + GG+ + + + +D+ W +L+
Sbjct: 215 PGVRAGHTAVNIGTKAINVYVIGGVGDKHYYN----DVWVLDV--SACSWTKLDI----- 263
Query: 518 VGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
S P R H AV I I+GG +QL +L E P+ R
Sbjct: 264 ----SGQQPQGRFSHTAVVTDL-NIAIYGGCREDERPLNQLLVLQLEAEHPNGR 312
>gi|291566707|dbj|BAI88979.1| two-component response regulator [Arthrospira platensis NIES-39]
Length = 501
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T V+ D PD PIIYVN FE TGY A E+LG NCRFLQ +R P +D
Sbjct: 174 ATQNGVVITDPNQPDNPIIYVNFGFERLTGYPAHEILGSNCRFLQGN----ERDQPALD- 228
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+IR+ + E E + L N+++DGT N L ++P+R++ G +T+ IGIQ
Sbjct: 229 ----DIRQAIAEAEECRVILKNYRRDGTMFWNELFISPVRNEQGELTNFIGIQ 277
>gi|163851076|ref|YP_001639119.1| histidine kinase [Methylobacterium extorquens PA1]
gi|218529906|ref|YP_002420722.1| histidine kinase [Methylobacterium extorquens CM4]
gi|240138210|ref|YP_002962682.1| sensor hybrid histidine kinase with PAS/PAC and response receiver
regulator receiver domains [Methylobacterium extorquens
AM1]
gi|254560770|ref|YP_003067865.1| sensor hybrid histidine kinase with PAS/PAC and response receiver
regulator receiver domains [Methylobacterium extorquens
DM4]
gi|418059761|ref|ZP_12697700.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium extorquens
DSM 13060]
gi|163662681|gb|ABY30048.1| PAS sensor protein [Methylobacterium extorquens PA1]
gi|218522209|gb|ACK82794.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium extorquens
CM4]
gi|240008179|gb|ACS39405.1| putative sensor hybrid histidine kinase with PAS/PAC and response
receiver regulator receiver domains [Methylobacterium
extorquens AM1]
gi|254268048|emb|CAX23919.1| putative sensor hybrid histidine kinase with PAS/PAC and response
receiver regulator receiver domains [Methylobacterium
extorquens DM4]
gi|373566703|gb|EHP92693.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium extorquens
DSM 13060]
Length = 541
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY A+E++G NCRFLQ P D
Sbjct: 39 TTRMPMIVTDPHQPDNPIIFANRAFVRMTGYSAEELIGSNCRFLQ---------GPDTDR 89
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VSE+R + E EF E+LN++KDG+ N L ++P+ + G + + G Q+
Sbjct: 90 DTVSEVRDAIREHREFAAEILNYRKDGSSFWNALFVSPVFNRSGDLVYFFGSQL 143
>gi|311692314|dbj|BAJ24888.1| LOV/LOV protein 2 [Physcomitrella patens]
Length = 437
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
S V+AD PD PI++ + VF TGY +EV+GRNCRFLQ P DP V
Sbjct: 292 SLVLADPSLPDTPIVHASDVFCELTGYSREEVVGRNCRFLQ---------GPDTDPESVR 342
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
EIR ++ +LN++KD TP N L +AP+R G V + +G+Q+
Sbjct: 343 EIREAIQAERPCTVRILNYRKDDTPFWNHLHVAPVRSATGKVAYFVGVQL 392
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++D PD PI++ ++ F +GY +EVLGRNCRFLQ P D V
Sbjct: 64 NFVLSDPRLPDHPIVFASEGFLRMSGYDREEVLGRNCRFLQ---------GPDTDRGTVV 114
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
EIR + E Q +LN+ K G P N +API +DG V H +G+Q
Sbjct: 115 EIRDAIREERACQVRILNYTKQGEPFWNLFHMAPIFSNDGRVIHYVGVQ 163
>gi|448530974|ref|ZP_21620808.1| bacterio-opsin activator [Halorubrum hochstenium ATCC 700873]
gi|445707414|gb|ELZ59268.1| bacterio-opsin activator [Halorubrum hochstenium ATCC 700873]
Length = 667
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D PD+P++YVN + TGY +EVLGRN RFLQ P DP
Sbjct: 150 PIGISISDPDLPDYPLVYVNDAWREHTGYSVEEVLGRNPRFLQ---------GPGTDPET 200
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V EI + E E+ N+++DGTP N L +AP+ D++G + H +G Q
Sbjct: 201 VEEIAEAIGNEEEVTVEIRNYRRDGTPFWNELTVAPVYDEEGDLAHYVGFQ 251
>gi|389864875|ref|YP_006367116.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(S) [Modestobacter marinus]
gi|388487079|emb|CCH88635.1| Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(S) [Modestobacter marinus]
Length = 750
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 31 GGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGR 90
G G E+ L+ L T + +AD PD P++YVN FE G A LGR
Sbjct: 438 GSADGATLQEMVLQRAL---AATTSGVAIADMTAPDQPLVYVNAAFEQLAGLPAGRALGR 494
Query: 91 NCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFK-KDGTPLVNRLRLAP 149
NCRFLQ P DP VV+ +R+ + EG EF+ LLN + + P N + LAP
Sbjct: 495 NCRFLQ---------GPDTDPGVVARMRQAIREGAEFRATLLNHRGPEREPWWNEIHLAP 545
Query: 150 IRDDDGTVTHIIGIQIFSEAKI 171
+ D G + IG+Q A++
Sbjct: 546 VLDSSGQLVQYIGVQTDVTARV 567
>gi|357976441|ref|ZP_09140412.1| LuxR family transcriptional regulator [Sphingomonas sp. KC8]
Length = 191
Score = 85.5 bits (210), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
V+++ PD PII N FE TGYR DE++GRNCRFL P +P + +EI
Sbjct: 10 VISNPRLPDNPIIECNAAFESLTGYRRDEIIGRNCRFLA---------GPRTEPGLTAEI 60
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+ E E+LN+KKDGTP N + +API D +G + + +G Q+
Sbjct: 61 VSAVREKRPVLVEILNYKKDGTPFRNAVLVAPIFDGNGDLEYFLGSQM 108
>gi|302790738|ref|XP_002977136.1| hypothetical protein SELMODRAFT_52725 [Selaginella moellendorffii]
gi|300155112|gb|EFJ21745.1| hypothetical protein SELMODRAFT_52725 [Selaginella moellendorffii]
Length = 407
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 139/318 (43%), Gaps = 37/318 (11%)
Query: 308 NFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPG-RWGHTLSSL 366
+A G RL LFGG G ++ + V D+ W + +K + P R HT ++
Sbjct: 25 TLTAVNNGKRLFLFGGYG----KIETSHVHVFDSVTKSWSKPFLKGTLPAPRDSHTCTAA 80
Query: 367 NGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVS 426
GS L VFGG LN+++VLD T + SG P R HS+ ++ G L V
Sbjct: 81 -GSKLFVFGGTDGTTPLNELYVLDTTTYTWTKPDTSGDIPA-AREGHSAALV-GDDLYVF 137
Query: 427 GGCTDAG------VLLSDTYLLDLTTDKPMWREIPTSWSPP-SRLGHSLSVYGRTKVLMF 479
GGC V D Y L T+ +WR++ TS P SR HS+S +G K+++F
Sbjct: 138 GGCGKKKQGQAQEVYYDDLYALSTTS--CVWRKVLTSGPRPCSRDSHSMSCFG-NKLVLF 194
Query: 480 GGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPC 539
GG L + Y +D+G E W +LE V P PR H A +
Sbjct: 195 GG---EDVLNTYLADIYILDVGSLE--WSRLETR---------GVKPAPRAGHAAERI-G 239
Query: 540 GRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTR--VL 597
+IIFGG +++LD + W V G P + ++ ++ R V
Sbjct: 240 DNLIIFGGFADKRTLFDDVYVLDLLSGE--WHKPEVTGNGPSHRFSLASDLIDPERGVVA 297
Query: 598 VLGGHTGEEWVLNELHEL 615
+ GG GE L E+ L
Sbjct: 298 LYGGCNGELEALPEMFFL 315
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 131/284 (46%), Gaps = 42/284 (14%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W K ++G + R + + AAG++L +FGG P+++ +V LD W +
Sbjct: 59 WSKPFLKGTLPAPRDSHTCTAAGSKLFVFGGTD-GTTPLNELYV--LDTTTYTWTKPDTS 115
Query: 353 SS-PPGRWGHTLSSLNGSWLVVFGGCG--RQGLLNDVFVLDLDAKQPT---WIEV-SGGA 405
P R GH+ ++L G L VFGGCG +QG +V+ DL A T W +V + G
Sbjct: 116 GDIPAAREGHS-AALVGDDLYVFGGCGKKKQGQAQEVYYDDLYALSTTSCVWRKVLTSGP 174
Query: 406 PPLPRSWHS-SCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-R 463
P R HS SC G+KLV+ GG L+D Y+LD+ + + W + T P+ R
Sbjct: 175 RPCSRDSHSMSCF--GNKLVLFGGEDVLNTYLADIYILDVGSLE--WSRLETRGVKPAPR 230
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ-- 521
GH+ G +++FGG A R + Y +DL E W + E TG G
Sbjct: 231 AGHAAERIG-DNLIIFGGFADK---RTLFDDVYVLDLLSGE--WHKPEV---TGNGPSHR 281
Query: 522 ----SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLL 561
S ++ P R G + ++GG L + ++F L
Sbjct: 282 FSLASDLIDPER----------GVVALYGGCNGELEALPEMFFL 315
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 128/281 (45%), Gaps = 29/281 (10%)
Query: 347 RRVSVKSSPPGRWGHTLSSL-NGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIE-VSGG 404
R + P RWGHTL+++ NG L +FGG G+ + V D+ +W + G
Sbjct: 10 RATGRRIRPGKRWGHTLTAVNNGKRLFLFGGYGK---IETSHVHVFDSVTKSWSKPFLKG 66
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-PPSR 463
P PR H +C GSKL V GG TD L++ Y+LD TT W + TS P +R
Sbjct: 67 TLPAPRDSH-TCTAAGSKLFVFGG-TDGTTPLNELYVLDTTT--YTWTKPDTSGDIPAAR 122
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSA 523
GHS ++ G + +FGG K + G++ +E + L + T +
Sbjct: 123 EGHSAALVG-DDLYVFGGCGKK-----KQGQA-------QEVYYDDLYALSTTSCVWRKV 169
Query: 524 VVPPPR-LDHVAVSMPC--GRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPP 580
+ PR + SM C ++++FGG + +++LD + W L G P
Sbjct: 170 LTSGPRPCSRDSHSMSCFGNKLVLFGGEDVLNTYLADIYILDVGSLE--WSRLETRGVKP 227
Query: 581 KFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
GH+ +G +++ GG + + ++++ L L S +
Sbjct: 228 APRAGHAAERIGDN-LIIFGGFADKRTLFDDVYVLDLLSGE 267
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Query: 290 AVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRV 349
+ WRK G SR + S GN+LVLFGGE V + D ++ LD + EW R+
Sbjct: 163 SCVWRKVLTSGPRPCSRDSHSMSCFGNKLVLFGGEDVLNTYLADIYI--LDVGSLEWSRL 220
Query: 350 SVKSSPPG-RWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLDAKQPTWIEVSGGAPP 407
+ P R GH + G L++FGG ++ L +DV+VLDL + + EV+G P
Sbjct: 221 ETRGVKPAPRAGHAAERI-GDNLIIFGGFADKRTLFDDVYVLDLLSGEWHKPEVTGNGPS 279
Query: 408 LPRSWHSSCII-EGSKLVVSGGCTDAGVLLSDTYLL 442
S S I E + + GGC L + + L
Sbjct: 280 HRFSLASDLIDPERGVVALYGGCNGELEALPEMFFL 315
>gi|108711956|gb|ABF99751.1| Kelch motif family protein, expressed [Oryza sativa Japonica Group]
gi|218194051|gb|EEC76478.1| hypothetical protein OsI_14216 [Oryza sativa Indica Group]
gi|222626121|gb|EEE60253.1| hypothetical protein OsJ_13268 [Oryza sativa Japonica Group]
Length = 501
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 119/264 (45%), Gaps = 31/264 (11%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG-----APPLP 409
P R GHT S+ S +VVFGG + L+D+ V D++ + E +G A P P
Sbjct: 25 PAPRSGHTAVSIGKSKVVVFGGFADKRFLSDIAVYDVENRIWYTPECNGSGSDGQAGPSP 84
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSL 468
R++H + +I+ + + G G L D ++LD TD W E+ PS R +
Sbjct: 85 RAFHVAIVIDCNMFIFGG--RSGGKRLGDFWMLD--TDIWQWSELTGFGDLPSPREFAAA 140
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPP 528
S G K++M+GG L + Y +D E W +L S + VPPP
Sbjct: 141 SAIGNRKIVMYGGWDGKKWLS----DVYIMDTMSLE--WTEL---------SVTGSVPPP 185
Query: 529 RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLL----DPSEEKPSWRILNVPGQPPKFAW 584
R H A +M R+++FGG L+ L + E P W L +PGQ P
Sbjct: 186 RCGHSA-TMIEKRLLVFGGRGGAGPIMGDLWALKGVTEEDNETPGWTQLKLPGQSPSPRC 244
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWV 608
GHS GG +L+ GGH W+
Sbjct: 245 GHS-VTSGGPYLLLFGGHGTGGWL 267
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 17/149 (11%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLN----LDAANPEWRR 348
W + +V G+V P RC SA RL++FGG G M D + L D P W +
Sbjct: 173 WTELSVTGSVPPPRCGHSATMIEKRLLVFGGRGGAGPIMGDLWALKGVTEEDNETPGWTQ 232
Query: 349 VSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL-------NDVFVLDLDAKQPTWIE 400
+ + SP R GH+++S G +L++FGG G G L N+ +LD + Q +
Sbjct: 233 LKLPGQSPSPRCGHSVTS-GGPYLLLFGGHGTGGWLSRYDVYYNECIILDRVSVQWKLLA 291
Query: 401 VSGGAPPLPRSWHS-SCIIEGSKLVVSGG 428
S PP PR++HS +CI GS+ ++ GG
Sbjct: 292 TSNEPPP-PRAYHSMTCI--GSRFLLFGG 317
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W + T G + R +A A GNR ++ G + + D ++ +D + EW +SV
Sbjct: 122 WSELTGFGDLPSPREFAAASAIGNRKIVMYGGWDGKKWLSDVYI--MDTMSLEWTELSVT 179
Query: 353 SS-PPGRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVL----DLDAKQPTWIEVS-GGA 405
S PP R GH+ + + L+VFGG G G ++ D++ L + D + P W ++ G
Sbjct: 180 GSVPPPRCGHSATMIEKR-LLVFGGRGGAGPIMGDLWALKGVTEEDNETPGWTQLKLPGQ 238
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAG------VLLSDTYLLDLTTDKPMWREIPTSWS 459
P PR H S G L++ GG G V ++ +LD + + W+ + TS
Sbjct: 239 SPSPRCGH-SVTSGGPYLLLFGGHGTGGWLSRYDVYYNECIILDRVSVQ--WKLLATSNE 295
Query: 460 -PPSRLGHSLSVYGRTKVLMFGGL 482
PP R HS++ G ++ L+FGG
Sbjct: 296 PPPPRAYHSMTCIG-SRFLLFGGF 318
>gi|452206471|ref|YP_007486593.1| sensor box histidine kinase [Natronomonas moolapensis 8.8.11]
gi|452082571|emb|CCQ35831.1| sensor box histidine kinase [Natronomonas moolapensis 8.8.11]
Length = 583
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P VAD D P+IYVN F TGY DEVLG+NCRFLQ R P
Sbjct: 127 PVGVTVADVTLDDEPLIYVNDGFGDITGYPRDEVLGQNCRFLQ---GDGTRDEP------ 177
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+++R ++ EL N++KDGT NR+ L+P+ + DGTVTH +G Q
Sbjct: 178 VAKMRAAIDAEQSVTVELRNYRKDGTEFWNRITLSPVENSDGTVTHYLGFQ 228
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Query: 47 LLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRH 106
LLF + V D + I YVN FE TGY A E +G+ R L D
Sbjct: 242 LLFETYAEQADSVLFITDAEGVIQYVNPAFERITGYSAAEAIGQTPRILNSGDQ------ 295
Query: 107 PLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
D E + G ++ E+ N K G R+ PI DD GT+ + + +
Sbjct: 296 ---DEAFYEEFWETITAGETWEAEIANQTKAGERYETTQRVTPIEDDRGTIQYYVAFE 350
>gi|268560094|ref|XP_002637963.1| Hypothetical protein CBG04780 [Caenorhabditis briggsae]
Length = 428
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 135/329 (41%), Gaps = 40/329 (12%)
Query: 304 PSRCNFSACAAGNRLVLFGG--EGVNMQPMDDTFVLNLDAANPEWRR------------- 348
P R N +A A G+R+ FGG G P D V LD N W +
Sbjct: 12 PRRVNHAAIAVGSRVYTFGGYCSGETTDPRDPVDVHVLDTQNFRWTKLNPCYMHEDAVCS 71
Query: 349 ---VSVKSS---------PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQP 396
+ KS+ P R+GHT +G V G G N + + D ++
Sbjct: 72 LQEIHAKSAGSEKLGGTVPFQRYGHTAVEYDGKAYVWGGRNDDYGACN--MLHEYDPEKN 129
Query: 397 TW--IEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI 454
W +E+ G PP R H++CI V G D +TY D T WR+I
Sbjct: 130 LWRKLEIKGFIPP-ARDGHTACIWNHQMYVFGGFEEDTQRFSQETYAFDFAT--ATWRQI 186
Query: 455 PTSWSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECN 513
TS + P R H+ SV + G +G + T DL D+ LE
Sbjct: 187 HTSGTAPLWRDFHTASVIDGVMYIFGGRSDHNGQVGDEHLFHTTQDLYDDSLMALDLETQ 246
Query: 514 AFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSP-SQLFLLDPSEEKPSWRI 572
+T V ++S+ P R H + + G++ +FGG + + ++L+ +P EE SW +
Sbjct: 247 EWTKVEARSSCRPGGRRSH-STWVHGGKMYMFGGYLGTRNKHYNELYCFNPKEE--SWSV 303
Query: 573 LNVPGQPPKFAWGHSTCVVGGTRVLVLGG 601
++V G P H + + G +V + GG
Sbjct: 304 IDVRGTYPTARRRHCSVISSG-KVYIFGG 331
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 110/288 (38%), Gaps = 39/288 (13%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
E WRK ++G + P+R +AC +++ +FGG + Q D A WR+
Sbjct: 127 EKNLWRKLEIKGFIPPARDGHTACIWNHQMYVFGGFEEDTQRFSQE-TYAFDFATATWRQ 185
Query: 349 VSVKSSPP-GRWGHTLSSLNGSWLVVFGGCG--------------RQGLLND-VFVLDLD 392
+ + P R HT S ++G + +FGG Q L +D + LDL+
Sbjct: 186 IHTSGTAPLWRDFHTASVIDGV-MYIFGGRSDHNGQVGDEHLFHTTQDLYDDSLMALDLE 244
Query: 393 AKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWR 452
++ T +E P R HS+ + G + G ++ Y + + W
Sbjct: 245 TQEWTKVEARSSCRPGGRRSHSTWVHGGKMYMFGGYLGTRNKHYNELYCFNPKEES--WS 302
Query: 453 EIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLEC 512
I + P+ SV KV +FGG + +
Sbjct: 303 VIDVRGTYPTARRRHCSVISSGKVYIFGGT-----------------MPNPSTCHPLASP 345
Query: 513 NAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAG-LHSPSQLF 559
NAF G S S + L HV +P +++ I+ HSPSQ+F
Sbjct: 346 NAFNGNISPSGLSDLSDL-HVLDFLPSLKMLAMRTIISDPAHSPSQMF 392
>gi|168047069|ref|XP_001775994.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672652|gb|EDQ59186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
S V+AD PD PI++ + VF TGY +EV+GRNCRFLQ P DP V
Sbjct: 261 SLVLADPSLPDTPIVHASDVFCELTGYSREEVVGRNCRFLQ---------GPDTDPESVR 311
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
EIR ++ +LN++KD TP N L +AP+R G V + +G+Q+
Sbjct: 312 EIREAIQAERPCTVRILNYRKDDTPFWNHLHVAPVRSATGKVAYFVGVQL 361
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV++D PD PI++ ++ F +GY +EVLGRNCRFLQ P D V
Sbjct: 48 NFVLSDPRLPDHPIVFASEGFLRMSGYDREEVLGRNCRFLQ---------GPDTDRGTVV 98
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
EIR + E Q +LN+ K G P N +API +DG V H +G+Q
Sbjct: 99 EIRDAIREERACQVRILNYTKQGEPFWNLFHMAPIFSNDGRVIHYVGVQ 147
>gi|298707248|emb|CBJ25875.1| aureochrome 1 [Ectocarpus siliculosus]
Length = 621
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 12/128 (9%)
Query: 37 DDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ 96
DD + SL L T +FV+ DA PD PI++ + F T Y+ EVLGRNCRFLQ
Sbjct: 432 DDPDYSLVKALQ---TAQQNFVITDASLPDNPIVFASGGFLALTRYKLVEVLGRNCRFLQ 488
Query: 97 YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGT 156
+ DP V +IR+ ++EG + LLN++ DGT N+ +A +RD G
Sbjct: 489 GAE---------TDPKAVDKIRKAIDEGYDTSVCLLNYRADGTTFWNQFFVASLRDGKGN 539
Query: 157 VTHIIGIQ 164
+ +G+Q
Sbjct: 540 TVNYVGVQ 547
>gi|440790894|gb|ELR12157.1| kelch repeat protein [Acanthamoeba castellanii str. Neff]
Length = 983
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W + G++ R +A A G ++LFGG + + D + D N W R+S +
Sbjct: 247 WEEIITAGSLPSPRYGHTAVAFGTSILLFGGADRSSECFHDLWCF--DTTNYSWTRISTE 304
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSW 412
P R GHT+++++ S ++VFGG G G LND++ LD Q + EV G P R++
Sbjct: 305 PKPSPRHGHTMTTVSSSKILVFGGYGPGGRLNDIWQLDPFTLQWSPFEVVGEVPAR-RAY 363
Query: 413 HSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS------------P 460
HS+ + KL+V GG A + D L + W ++ +S S P
Sbjct: 364 HSAVAMR-FKLLVFGGQGAAS--MGD--LWQFSPGSATWTKLNSSRSTDKVSIMENVVGP 418
Query: 461 PSRLGHSLSVYGRTKVLMFGGLAKSGHLR 489
R GHS V+G K+ +FGG+ + R
Sbjct: 419 AGRYGHSGEVFGSDKMFIFGGVGDASVYR 447
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 140/327 (42%), Gaps = 56/327 (17%)
Query: 298 VRGAVEP-SRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPP 356
++G + P SR S N ++++GG +P+ D +VL D + W R +S
Sbjct: 146 LQGQMRPQSRRGHSCVRYDNFMIVYGG--YRGRPLSDMWVL--DTVSVRWSRFQTPTSAH 201
Query: 357 G------RWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLDAKQPTWIEV-SGGAPPL 408
G R GH S + G + +FGG +ND++V DL K+ W E+ + G+ P
Sbjct: 202 GGKHPGQRTGHA-SVIIGDKMWLFGGETENHKCVNDLWVFDLGLKK--WEEIITAGSLPS 258
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSL 468
PR H++ G+ +++ GG + D + D T W I T P R GH++
Sbjct: 259 PRYGHTAVAF-GTSILLFGGADRSSECFHDLWCFDTT--NYSWTRISTEPKPSPRHGHTM 315
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEP---QWKQLECNAFTGVGSQSAVV 525
+ +K+L+FGG G L D+ +P QW E VG V
Sbjct: 316 TTVSSSKILVFGGYGPGGRLN---------DIWQLDPFTLQWSPFEV-----VGE----V 357
Query: 526 PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFA-- 583
P R H AV+M ++++FGG G S L+ P +W LN K +
Sbjct: 358 PARRAYHSAVAMRF-KLLVFGGQ--GAASMGDLWQFSPG--SATWTKLNSSRSTDKVSIM 412
Query: 584 ---------WGHSTCVVGGTRVLVLGG 601
+GHS V G ++ + GG
Sbjct: 413 ENVVGPAGRYGHSGEVFGSDKMFIFGG 439
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 29/220 (13%)
Query: 401 VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS- 459
+ G P R HS C+ + ++V GG G LSD ++LD + + + PTS
Sbjct: 146 LQGQMRPQSRRGHS-CVRYDNFMIVYGGYR--GRPLSDMWVLDTVSVRWSRFQTPTSAHG 202
Query: 460 ---PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFT 516
P R GH+ + G K+ +FGG ++ + + DLG + +W+++
Sbjct: 203 GKHPGQRTGHASVIIG-DKMWLFGGETENHKC---VNDLWVFDLGLK--KWEEIIT---- 252
Query: 517 GVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSW-RILNV 575
+ +P PR H AV+ I++FGG+ L+ D + SW RI
Sbjct: 253 -----AGSLPSPRYGHTAVAFGTS-ILLFGGADRSSECFHDLWCFDTT--NYSWTRISTE 304
Query: 576 PGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHEL 615
P P+ GH+ V +++LV GG+ G LN++ +L
Sbjct: 305 PKPSPRH--GHTMTTVSSSKILVFGGY-GPGGRLNDIWQL 341
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 19/131 (14%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W F V G V R SA A +L++FGG+G M D + + +A W +++
Sbjct: 348 WSPFEVVGEVPARRAYHSAVAMRFKLLVFGGQGA--ASMGDLWQFSPGSAT--WTKLNSS 403
Query: 353 SS------------PPGRWGHTLSSLNGSWLVVFGGCGRQGLLND---VFVLDLDAKQPT 397
S P GR+GH+ + +FGG G + D +DL +P
Sbjct: 404 RSTDKVSIMENVVGPAGRYGHSGEVFGSDKMFIFGGVGDASVYRDDLWFLYVDLSLPEPL 463
Query: 398 WIEVSGGAPPL 408
+E+ G + L
Sbjct: 464 EMEMHGASAGL 474
>gi|367032420|ref|XP_003665493.1| hypothetical protein MYCTH_2309330 [Myceliophthora thermophila ATCC
42464]
gi|347012764|gb|AEO60248.1| hypothetical protein MYCTH_2309330 [Myceliophthora thermophila ATCC
42464]
Length = 1033
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD--PRAQRRHPLVDPVV 113
+F+V D D PIIYV+ F+ TGY E++G+NCRFLQ D A R V
Sbjct: 359 AFLVTDVTLNDCPIIYVSDNFQNLTGYNRHEIIGKNCRFLQSPDGEVEAGSRREFVANDA 418
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L L PI D + + IG QI
Sbjct: 419 VLKLKNAVTEGKEIQQSLINYRKGGKPFLNLLTLIPIPWDSDEIKYFIGFQI 470
>gi|448435239|ref|ZP_21586716.1| bacterio-opsin activator [Halorubrum tebenquichense DSM 14210]
gi|445684063|gb|ELZ36449.1| bacterio-opsin activator [Halorubrum tebenquichense DSM 14210]
Length = 667
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D PD+P++YVN + TGY +EVLGRN RFLQ P DP
Sbjct: 150 PIGISISDPDLPDYPLVYVNDAWREHTGYSVEEVLGRNPRFLQ---------GPGTDPET 200
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V EI + E E+ N+++DGTP N L +AP+ D++G + H +G Q
Sbjct: 201 VEEIAEAIGNEEEVTVEIRNYRRDGTPFWNELTVAPVYDEEGELAHYVGFQ 251
>gi|389637486|ref|XP_003716379.1| hypothetical protein MGG_03538 [Magnaporthe oryzae 70-15]
gi|351642198|gb|EHA50060.1| hypothetical protein MGG_03538 [Magnaporthe oryzae 70-15]
gi|440467210|gb|ELQ36447.1| hypothetical protein OOU_Y34scaffold00662g28 [Magnaporthe oryzae
Y34]
gi|440478861|gb|ELQ59659.1| hypothetical protein OOW_P131scaffold01337g1 [Magnaporthe oryzae
P131]
Length = 1101
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ---RRHPLVDPV 112
+FVV+D PD PIIYV+ F+ TGY E++G+NCRFLQ D + + +R + D
Sbjct: 398 AFVVSDINLPDCPIIYVSSNFQNLTGYSEHEIIGKNCRFLQAPDGQVEAGVKREFVADDA 457
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V S +++ + E E Q L+N++K G P +N L + PI ++ + + IG QI
Sbjct: 458 VFS-LKKAIAERKEIQQSLINYRKGGKPFLNLLTMIPIPWEEQELRYYIGFQI 509
>gi|336272938|ref|XP_003351224.1| white collar 1 protein [Sordaria macrospora k-hell]
gi|380092744|emb|CCC09497.1| putative white collar 1 protein [Sordaria macrospora k-hell]
Length = 1205
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD--PRAQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++GRNCRFLQ D A + V+
Sbjct: 382 AFVVCDVMLNDCPIIYVSDNFQNLTGYSRHEIVGRNCRFLQAPDGNVEAGTKREFVENNA 441
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + G E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 442 VYTLKKTIAAGQEIQQSLINYRKGGKPFLNLLTMIPIPWDTEEIRYFIGFQI 493
>gi|448503538|ref|ZP_21613167.1| bacterio-opsin activator [Halorubrum coriense DSM 10284]
gi|445691739|gb|ELZ43922.1| bacterio-opsin activator [Halorubrum coriense DSM 10284]
Length = 668
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D+P++YVN +E TGY +E LGRN RFLQ P DP
Sbjct: 152 PIGISISDPDLSDYPLVYVNDAWEDHTGYPVEEALGRNPRFLQ---------GPGTDPET 202
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V EI L E E+ N+++DGTP N L +API D+DG + H +G Q
Sbjct: 203 VEEIAEALGNEEEVTVEIRNYRRDGTPFWNELTVAPIYDEDGGLAHYVGFQ 253
>gi|357131916|ref|XP_003567579.1| PREDICTED: acyl-CoA-binding domain-containing protein 4-like
[Brachypodium distachyon]
Length = 615
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 125/290 (43%), Gaps = 29/290 (10%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
LE + W G +R + A G+R+++FGG + ++D VL+L EW
Sbjct: 53 NLETMAWSSLATTGQKPGTRDSHGAALIGHRMMVFGGTN-GTKKVNDLHVLDLRTK--EW 109
Query: 347 RRVSVKSSPPG-RWGHTLS-SLNGSWLVVFGGCGRQ--GLLNDVFVLDLDAKQPTWIEVS 402
R + K +PP R HT++ + G LVVFGG G L+DV VLD+ T EV
Sbjct: 110 SRPACKGTPPSPRESHTVTVAGGGDRLVVFGGSGEGEGNYLSDVHVLDVPTMTWTSPEVK 169
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS-WSPP 461
GG P PR H + + V G C D + +LD+ D W P SP
Sbjct: 170 GGDGPAPRDSHGAVAVGNRLFVYGGDCGDR--YHGEVDVLDM--DTMAWSRFPVKGASPG 225
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
R GH+ G +K+ + GG+ + +++ +D+ W QLE G Q
Sbjct: 226 VRAGHAALGIG-SKIYVIGGVGDKQYYS----DAWILDVPSRS--WTQLEI-----CGQQ 273
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
P R H AV M I I+GG ++L +L P+ R
Sbjct: 274 ----PQGRFSHSAVIMNT-DIAIYGGCGEDERPLNELLILQLGSGHPNGR 318
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 140/331 (42%), Gaps = 31/331 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W V G P R SAC + +FGG + D LNL+ W ++
Sbjct: 9 WLYPKVVGFNPPERWGHSACFFEGVIYVFGGCCGGLH-FSDVVTLNLETM--AWSSLATT 65
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS-GGAPPLPRS 411
PG ++L G ++VFGG +ND+ VLDL K+ W + G PP PR
Sbjct: 66 GQKPGTRDSHGAALIGHRMMVFGGTNGTKKVNDLHVLDLRTKE--WSRPACKGTPPSPRE 123
Query: 412 WHSSCII-EGSKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLS 469
H+ + G +LVV GG + G LSD ++LD+ T E+ P R H
Sbjct: 124 SHTVTVAGGGDRLVVFGGSGEGEGNYLSDVHVLDVPTMTWTSPEVKGGDGPAPRDSHGAV 183
Query: 470 VYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPR 529
G ++ ++GG + GE +D+ + W + + P R
Sbjct: 184 AVG-NRLFVYGGDCGDRY----HGEVDVLDM--DTMAWSRFPVKGAS---------PGVR 227
Query: 530 LDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD-PSEEKPSWRILNVPGQPPKFAWGHST 588
H A+ + +I + GG + S ++LD PS SW L + GQ P+ + HS
Sbjct: 228 AGHAALGI-GSKIYVIGG-VGDKQYYSDAWILDVPSR---SWTQLEICGQQPQGRFSHS- 281
Query: 589 CVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
V+ T + + GG +E LNEL L L S
Sbjct: 282 AVIMNTDIAIYGGCGEDERPLNELLILQLGS 312
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++ + W +F V+GA R +A G+++ + GG G + Q D ++ LD +
Sbjct: 205 DVLDMDTMAWSRFPVKGASPGVRAGHAALGIGSKIYVIGGVG-DKQYYSDAWI--LDVPS 261
Query: 344 PEWRRVSV-KSSPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ + P GR+ H+ +N + + ++GGCG + LN++ +L L + P
Sbjct: 262 RSWTQLEICGQQPQGRFSHSAVIMN-TDIAIYGGCGEDERPLNELLILQLGSGHPN 316
>gi|254559559|ref|YP_003066654.1| sensory transduction histidine kinase [Methylobacterium extorquens
DM4]
gi|254266837|emb|CAX22636.1| putative SENSORY TRANSDUCTION HISTIDINE KINASE of the HWE family
[Methylobacterium extorquens DM4]
Length = 488
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 42 SLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR 101
S P T ++ D PD PI++VN F TGY +E+LGRNCRFLQ
Sbjct: 20 STDPFAAAVKATRMPMLITDPHRPDNPIVFVNGAFSKLTGYSREEILGRNCRFLQ----- 74
Query: 102 AQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHII 161
P DP V+ IR +E + + +LLN KK G NRL ++P+ DD+G +T+
Sbjct: 75 ----GPETDPRDVARIRDAVERRVPVEIDLLNHKKSGEVFWNRLLISPVFDDEGQLTYFF 130
Query: 162 GIQI 165
Q
Sbjct: 131 ASQF 134
>gi|343426230|emb|CBQ69761.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1136
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 140/293 (47%), Gaps = 38/293 (12%)
Query: 346 WRRVSVK----SSPPGRWGHTLSSLNGSWLVVFGGCGR-----QGLLNDVFVLDLDAKQP 396
W+ VS++ ++PP + HT+S LN + L++FGG Q + ++L L
Sbjct: 83 WQSVSLQQGTSAAPPVSF-HTISPLNTTSLLLFGGDASPVVPVQTGNDSAYILHLGGPS- 140
Query: 397 TWIEVSGGAPPLPRSWH---------SSCIIEGSKLVVSGGCTD-AGVLLSDTYLLDLTT 446
+ P+P SW+ S +GS +V G D +G+ L + D T
Sbjct: 141 --TNRTVAYQPVPASWNQPMRRMGHTSESNAQGSVWIVGGQKADGSGIALDQQWNADATA 198
Query: 447 DKPMWREIPTSWSPPSRL-GHSLSVYGRTKVLMFGGLAKSGHLR-LRSGESYTIDLGDEE 504
P ++ + S SPP L G + ++ VL+ GGL SG L+ L++ +Y+ +
Sbjct: 199 SSPSFQLL--SSSPPGSLVGATSTLLSDGTVLLLGGLDASGQLQSLQNLYAYS----SKS 252
Query: 505 PQWKQL--ECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSP-SQLFLL 561
+W Q + + + ++ +V P PR DH+AVS+P R+ I GG+ A L + S ++L
Sbjct: 253 SKWSQTATQSSGNATLSARQSVFPAPRRDHIAVSLPNQRVFIQGGASADLSTVYSDAWIL 312
Query: 562 DPSEEKPSWRILNVPGQP-PKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELH 613
D S P W +LN G P P+F GHS V G +L+ G G LH
Sbjct: 313 DWSVTPPVWTLLNSTGGPGPRF--GHS-AVAYGRNILISFGWAGGNAAPTGLH 362
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 331 MDDTFVLNLDAANPEWRRVSVKSSPPGRW-GHTLSSLNGSWLVVFGGCGRQGLLNDVFVL 389
+D + + A++P ++ +S SSPPG G T + L+ +++ GG G L + L
Sbjct: 188 LDQQWNADATASSPSFQLLS--SSPPGSLVGATSTLLSDGTVLLLGGLDASGQLQSLQNL 245
Query: 390 -DLDAKQPTW----IEVSGGAP--------PLPRSWHSSCIIEGSKLVVSGGCT-DAGVL 435
+K W + SG A P PR H + + ++ + GG + D +
Sbjct: 246 YAYSSKSSKWSQTATQSSGNATLSARQSVFPAPRRDHIAVSLPNQRVFIQGGASADLSTV 305
Query: 436 LSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFG 480
SD ++LD + P+W + ++ P R GHS YGR ++ FG
Sbjct: 306 YSDAWILDWSVTPPVWTLLNSTGGPGPRFGHSAVAYGRNILISFG 350
>gi|22298825|ref|NP_682072.1| two-component hybrid sensor and regulator [Thermosynechococcus
elongatus BP-1]
gi|22295006|dbj|BAC08834.1| two-component hybrid sensor and regulator [Thermosynechococcus
elongatus BP-1]
Length = 1353
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ D PD P+IYVN FE TGYRA EV+G+NCRFLQ D R P +
Sbjct: 330 IVITDYRQPDNPVIYVNPAFERMTGYRATEVIGKNCRFLQGSD----RHQP-----GATA 380
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR +++G + L N++K+G N L ++PI ++ G +TH IGIQ
Sbjct: 381 IRNAIKKGQSCRVVLRNYRKNGQLFWNELAISPIYNEFGEITHYIGIQ 428
>gi|322712912|gb|EFZ04485.1| hypothetical protein MAA_01559 [Metarhizium anisopliae ARSEF 23]
Length = 821
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
F + D D PI+++++ F T Y D V+GRNCRFLQ P +P V+
Sbjct: 243 FCLTDPSRHDNPIVFMSEEFNRTTQYGVDYVIGRNCRFLQ---------GPYTNPFSVTR 293
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR +E GIE LN+++DGTP +N + +AP+ D G + + IG Q+
Sbjct: 294 IREKIENGIEHYETFLNYRRDGTPFMNLVMIAPLYDSRGVIRYFIGAQV 342
>gi|218528865|ref|YP_002419681.1| signal transduction histidine kinase [Methylobacterium extorquens
CM4]
gi|218521168|gb|ACK81753.1| signal transduction histidine kinase [Methylobacterium extorquens
CM4]
Length = 488
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 42 SLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR 101
S P T ++ D PD PI++VN F TGY +E+LGRNCRFLQ
Sbjct: 20 STDPFAAAVKATRMPMLITDPHRPDNPIVFVNGAFSKLTGYSREEILGRNCRFLQ----- 74
Query: 102 AQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHII 161
P DP V+ IR +E + + +LLN KK G NRL ++P+ DD+G +T+
Sbjct: 75 ----GPETDPRDVARIRDAVERRVPVEIDLLNHKKSGEVFWNRLLISPVFDDEGQLTYFF 130
Query: 162 GIQI 165
Q
Sbjct: 131 ASQF 134
>gi|240137379|ref|YP_002961850.1| sensory transduction histidine kinase of the HWE family
[Methylobacterium extorquens AM1]
gi|418059067|ref|ZP_12697026.1| signal transduction histidine kinase [Methylobacterium extorquens
DSM 13060]
gi|240007347|gb|ACS38573.1| putative sensory transduction histidine kinase of the HWE family
[Methylobacterium extorquens AM1]
gi|373567409|gb|EHP93379.1| signal transduction histidine kinase [Methylobacterium extorquens
DSM 13060]
Length = 488
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 42 SLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR 101
S P T ++ D PD PI++VN F TGY +E+LGRNCRFLQ
Sbjct: 20 STDPFAAAVKATRMPMLITDPHRPDNPIVFVNGAFSKLTGYSREEILGRNCRFLQ----- 74
Query: 102 AQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHII 161
P DP V+ IR +E + + +LLN KK G NRL ++P+ DD+G +T+
Sbjct: 75 ----GPETDPRDVARIRDAVERRVPVEIDLLNHKKSGEVFWNRLLISPVFDDEGQLTYFF 130
Query: 162 GIQI 165
Q
Sbjct: 131 ASQF 134
>gi|126657235|ref|ZP_01728401.1| regulatory components of sensory transduction system [Cyanothece
sp. CCY0110]
gi|126621506|gb|EAZ92217.1| regulatory components of sensory transduction system [Cyanothece
sp. CCY0110]
Length = 483
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 40 ELSLKPGLLFYPTTPTS--FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQY 97
++ L+ L+ T+ ++ DA D+PIIYVN FE+ TGY +EV G+NCRFLQ
Sbjct: 158 QMPLESYFLYQAIAATNNGIIITDATTSDYPIIYVNPGFEVMTGYFFEEVKGKNCRFLQG 217
Query: 98 RDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
D + + + +IR CL G L N++KDG+ N L L+PI+D+ +
Sbjct: 218 SDHKQPQ---------LEQIRHCLYHGENCHITLRNYRKDGSLFWNELSLSPIKDESDKI 268
Query: 158 THIIGIQ 164
+ +G+Q
Sbjct: 269 IYYVGVQ 275
>gi|163850308|ref|YP_001638351.1| PAS sensor protein [Methylobacterium extorquens PA1]
gi|163661913|gb|ABY29280.1| PAS sensor protein [Methylobacterium extorquens PA1]
Length = 488
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 42 SLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR 101
S P T ++ D PD PI++VN F TGY +E+LGRNCRFLQ
Sbjct: 20 STDPFAAAVKATRMPMLITDPHRPDNPIVFVNGAFSKLTGYSREEILGRNCRFLQ----- 74
Query: 102 AQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHII 161
P DP V+ IR +E + + +LLN KK G NRL ++P+ DD+G +T+
Sbjct: 75 ----GPETDPRDVARIRDAVERRVPVEIDLLNHKKSGEVFWNRLLISPVFDDEGQLTYFF 130
Query: 162 GIQI 165
Q
Sbjct: 131 ASQF 134
>gi|87200360|ref|YP_497617.1| hypothetical protein Saro_2346 [Novosphingobium aromaticivorans DSM
12444]
gi|87136041|gb|ABD26783.1| signal transduction histidine kinase [Novosphingobium
aromaticivorans DSM 12444]
Length = 364
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 46 GLLF---YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRA 102
G+LF T + + D + D PI++ N+ F TGY EV+GRNCRFLQ
Sbjct: 43 GVLFEQAMAQTRMAICLCDPHEKDLPIVFANRAFRHLTGYDEHEVVGRNCRFLQ------ 96
Query: 103 QRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIG 162
P DP V+ I+ LE ELLN++KDGT N L L P+ D DG + + G
Sbjct: 97 ---GPGTDPAAVARIKAALEREDVIVVELLNYRKDGTAFWNALHLGPVYDADGRLIYFFG 153
Query: 163 IQ 164
Q
Sbjct: 154 SQ 155
>gi|302785774|ref|XP_002974658.1| hypothetical protein SELMODRAFT_442602 [Selaginella moellendorffii]
gi|300157553|gb|EFJ24178.1| hypothetical protein SELMODRAFT_442602 [Selaginella moellendorffii]
Length = 321
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 18/196 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W RG + +R + AAGN + +FGG Q +++ F + D EWR +S +
Sbjct: 60 WAVAESRGEIPSARVGVAMTAAGNTIFVFGGRDEQHQELNEFF--SFDTVTGEWRLLSAE 117
Query: 353 -SSPPGRWGHTLSS-LNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
+SPP R HTL++ G + FGGCG+ G LND++V ++++ TW ++ + PR
Sbjct: 118 ETSPPHRSYHTLAADKQGENIYTFGGCGKAGRLNDLWVFNIESS--TWKKLPESSTLAPR 175
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSR-LGHSLS 469
I+ G+ V+ G C D L+D + D+ + W E+ S S + +G S
Sbjct: 176 GGPGLAIVNGAVWVIFGFCGDE---LTDVHRFDIASQ--TWEEVQVSCSSLQKPIGR--S 228
Query: 470 VYGRT----KVLMFGG 481
V+G + K+ ++GG
Sbjct: 229 VFGTSCVGNKIFLYGG 244
>gi|284993377|ref|YP_003411932.1| putative PAS/PAC sensor protein [Geodermatophilus obscurus DSM
43160]
gi|284066623|gb|ADB77561.1| putative PAS/PAC sensor protein [Geodermatophilus obscurus DSM
43160]
Length = 760
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T +F + D PD P+++VN F TGY +E +GRNCRFLQ P DP
Sbjct: 192 TDIAFTITDPRQPDDPLVWVNPSFGRITGYSYEEAVGRNCRFLQ---------GPATDPA 242
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+EIR L LLN +KDGT N+L ++P+ D +G + +G+Q
Sbjct: 243 TVAEIRAALRARQAITTTLLNHRKDGTAFWNQLSVSPVFDGEGELVSFVGVQ 294
>gi|238506060|ref|XP_002384232.1| GATA transcription factor LreA [Aspergillus flavus NRRL3357]
gi|220690346|gb|EED46696.1| GATA transcription factor LreA [Aspergillus flavus NRRL3357]
Length = 589
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
+FV+ D D PIIYV++ FE TGY E++G+NCRFLQ + Q+ + VD
Sbjct: 25 AFVLCDITQNDHPIIYVSEAFERLTGYTEQEIVGQNCRFLQGPEGVVQKGMKRTFVDDET 84
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
S +R +E+ E Q L+N++K G P +N + + PIR +G Q +DL
Sbjct: 85 TSRLRSTIEDRTEIQASLINYRKGGQPFMNLITMIPIRWSSQEYRFYVGFQ------VDL 138
Query: 174 NHVSYPVFKENCNQQYDQSAQ 194
V + N N Y + Q
Sbjct: 139 VETPDAVTRRNPNGTYTINYQ 159
>gi|448311685|ref|ZP_21501439.1| HTR-like protein [Natronolimnobius innermongolicus JCM 12255]
gi|445603716|gb|ELY57673.1| HTR-like protein [Natronolimnobius innermongolicus JCM 12255]
Length = 655
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 38 DTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQY 97
+TELS++ + P + D D PIIY N F +GY DEVLGRNCRFLQ
Sbjct: 188 ETELSVRERAM--NEAPVGITLTDPHAEDNPIIYANDEFTSISGYERDEVLGRNCRFLQG 245
Query: 98 RDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
R + V+ +R +E EL N++ DGT NR+R+AP+ DD+G +
Sbjct: 246 EQTRDE---------PVANLRAAVENRESVTVELRNYRADGTEFWNRVRIAPLFDDNGDI 296
Query: 158 THIIGIQ 164
+ +G Q
Sbjct: 297 EYFVGFQ 303
>gi|328871890|gb|EGG20260.1| RING zinc finger-containing protein [Dictyostelium fasciculatum]
Length = 734
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 82/161 (50%), Gaps = 8/161 (4%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNR---LVLFGGEGVNMQPMDDTFVLNLDAANP- 344
+ + W K T RG+ R S LVLFGG + ++D LN +++
Sbjct: 183 DTIRWIKPTTRGSTPSVRSGHSMSLISKESGILVLFGGFD-GKRSLNDVHTLNCSSSDVL 241
Query: 345 EWRRVSVKS-SPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
EW +V SP R GHT +N +LV+ GGC LNDV +LDL T V+
Sbjct: 242 EWNKVQTSGISPVARHGHTAVVVNSRYLVIHGGCSETTFLNDVHILDLTTWNWTQPHVA- 300
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDL 444
G P PR +HS+ +++ ++VV GGC+ +G L SD LDL
Sbjct: 301 GIPLFPRLFHSANLMDSGEMVVFGGCS-SGRLYSDMCELDL 340
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 41/254 (16%)
Query: 317 RLVLFGGEGVNMQPMDDTFVLNL----------DAANPEWRRVSVKSSPPGRWGHTLSSL 366
++++FGG+ N + ++D F L+L D P+ R + P G T S+
Sbjct: 98 KIMIFGGKN-NKKSLNDLFCLSLPTMSWSTFHFDKVQPDSRAAHTCTFVPAIPGKTASN- 155
Query: 367 NGSWLVVFGGCGRQGLLNDVFVLD---LDAKQPTWIE-VSGGAPPLPRSWHSSCII--EG 420
+++F G LN ++ L+ L WI+ + G+ P RS HS +I E
Sbjct: 156 ---RMILFAGFHSHKYLNSLYSLEFPRLQNDTIRWIKPTTRGSTPSVRSGHSMSLISKES 212
Query: 421 SKLVVSGGCTDAGVLLSDTYLLDLTT-DKPMWREIPTS-WSPPSRLGHSLSVYGRTKVLM 478
LV+ GG D L+D + L+ ++ D W ++ TS SP +R GH+ V +++
Sbjct: 213 GILVLFGGF-DGKRSLNDVHTLNCSSSDVLEWNKVQTSGISPVARHGHTAVVVNSRYLVI 271
Query: 479 FGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPP-PRLDHVAVSM 537
GG +++ L + + +DL W Q A +P PRL H A M
Sbjct: 272 HGGCSETTFL----NDVHILDLTTWN--WTQ----------PHVAGIPLFPRLFHSANLM 315
Query: 538 PCGRIIIFGGSIAG 551
G +++FGG +G
Sbjct: 316 DSGEMVVFGGCSSG 329
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 54/288 (18%)
Query: 357 GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG-GAPPLPRSWHSS 415
RWGH SL G + VFGG G + L++ V D W EV G P R H++
Sbjct: 33 ARWGHASVSL-GKKVYVFGGQG-ESLMSTFCVYD--CTNSIWSEVHTLGKGPSARHGHTA 88
Query: 416 CIIEGS---KLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS--------PPSRL 464
++E K+++ GG + L +D + L L T SWS P SR
Sbjct: 89 TLVEDGETPKIMIFGGKNNKKSL-NDLFCLSLPT---------MSWSTFHFDKVQPDSRA 138
Query: 465 GHSLS----VYGRT---KVLMFGGLAKSGHLRLRSGESYTID---LGDEEPQWKQLECNA 514
H+ + + G+T ++++F G +L Y+++ L ++ +W +
Sbjct: 139 AHTCTFVPAIPGKTASNRMILFAGFHSHKYL----NSLYSLEFPRLQNDTIRWIKPTTRG 194
Query: 515 FTGVGSQSAVVPPPRLDHVA--VSMPCGRIIIFGGSIAGLHSPSQLFLLD-PSEEKPSWR 571
T P R H +S G +++FGG G S + + L+ S + W
Sbjct: 195 ST---------PSVRSGHSMSLISKESGILVLFGG-FDGKRSLNDVHTLNCSSSDVLEWN 244
Query: 572 ILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
+ G P GH+ VV +R LV+ G E LN++H L L +
Sbjct: 245 KVQTSGISPVARHGHTAVVV-NSRYLVIHGGCSETTFLNDVHILDLTT 291
>gi|317151070|ref|XP_001824426.2| GATA transcription factor LreA [Aspergillus oryzae RIB40]
Length = 837
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
+FV+ D D PIIYV++ FE TGY E++G+NCRFLQ + Q+ + VD
Sbjct: 273 AFVLCDITQNDHPIIYVSEAFERLTGYTEQEIVGQNCRFLQGPEGVVQKGMKRTFVDDET 332
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
S +R +E+ E Q L+N++K G P +N + + PIR +G Q +DL
Sbjct: 333 TSRLRSTIEDRTEIQASLINYRKGGQPFMNLITMIPIRWSSQEYRFYVGFQ------VDL 386
Query: 174 NHVSYPVFKENCNQQYDQSAQ 194
V + N N Y + Q
Sbjct: 387 VETPDAVTRRNPNGTYTINYQ 407
>gi|302408303|ref|XP_003001986.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261358907|gb|EEY21335.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 986
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD--PRAQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D A + VD
Sbjct: 329 AFVVCDMSLNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQAPDGAVEAGSKREFVDDAA 388
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI DD + +G QI
Sbjct: 389 VYNLKQKIHEGKEVQQSLINYRKGGKPFLNLLTMIPIPWDDPDEIRFFVGFQI 441
>gi|408421941|gb|AFU65172.1| white collar-1 protein [Cordyceps militaris]
Length = 963
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY + +++G+NCRFLQ D + A + VD
Sbjct: 327 AFVVCDVSMNDCPIIYVSDNFQNLTGYSSHDIVGQNCRFLQAPDGKVEAGTKREFVDNGA 386
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ ++E E Q L+N++K G P +N L + PI D V + IG QI
Sbjct: 387 VFNLKKMIQERREVQQSLINYRKGGKPFLNLLTMIPIPWDTDEVRYFIGFQI 438
>gi|334184717|ref|NP_001189689.1| galactose oxidase/kelch repeat-containing protein [Arabidopsis
thaliana]
gi|330254148|gb|AEC09242.1| galactose oxidase/kelch repeat-containing protein [Arabidopsis
thaliana]
Length = 512
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAK-----QPTWIEVSGGAPP 407
+ P R GHT ++ S +VVFGG + L+D+ V D++ K + T E G P
Sbjct: 15 TPPQARSGHTAVNVGKSMVVVFGGLVDKKFLSDIIVYDIENKLWFEPECTGSESEGQVGP 74
Query: 408 LPRSWHSSCIIEGSKLVV---SGG--CTDAGVLLSDTYLLDLTTDKPMWREIPTSWS--P 460
PR++H + I+ + SGG D VL + TY+L D W E+ TS+ P
Sbjct: 75 TPRAFHVAITIDCHMFIFGGRSGGKRLGDFWVLDTGTYMLTFAADIWQWSEL-TSFGDLP 133
Query: 461 PSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGS 520
R + + G K+++ GG L + Y +D E W +L S
Sbjct: 134 TPRDFAAAAAIGSQKIVLCGGWDGKKWL----SDVYVMDTMSLE--WLEL---------S 178
Query: 521 QSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLF----LLDPSEEKPSWRILNVP 576
S +PPPR H A +M R+++FGG G L+ L+D E P W L +P
Sbjct: 179 VSGSLPPPRCGHTA-TMVEKRLLVFGGRGGGGPIMGDLWALKGLIDEERETPGWTQLKLP 237
Query: 577 GQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWV 608
GQ P GH T GG +L+ GGH W+
Sbjct: 238 GQAPSSRCGH-TVTSGGHYLLLFGGHGTGGWL 268
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVL----NLDAANPEWRR 348
W + +V G++ P RC +A RL++FGG G M D + L + + P W +
Sbjct: 174 WLELSVSGSLPPPRCGHTATMVEKRLLVFGGRGGGGPIMGDLWALKGLIDEERETPGWTQ 233
Query: 349 VSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL-------NDVFVLDLDAKQPTWIE 400
+ + +P R GHT++S G +L++FGG G G L ND +LD Q +
Sbjct: 234 LKLPGQAPSSRCGHTVTS-GGHYLLLFGGHGTGGWLSRYDVYYNDTIILDRVTAQWKRLP 292
Query: 401 VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWRE--IPTSW 458
+ G PP PR++H+ I L++ G D + D + L + D P+ + +P
Sbjct: 293 I-GNEPPPPRAYHTMTCIGARHLLIGG--FDGKLTFGDLWWL-VPEDDPIAKRSSVPQVV 348
Query: 459 SPP 461
+PP
Sbjct: 349 NPP 351
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 132/325 (40%), Gaps = 45/325 (13%)
Query: 305 SRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSS-------PPG 357
+R +A G +V+ G V+ + + D V +++ N W S P
Sbjct: 19 ARSGHTAVNVGKSMVVVFGGLVDKKFLSDIIVYDIE--NKLWFEPECTGSESEGQVGPTP 76
Query: 358 RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPT-------WIEV-SGGAPPLP 409
R H +++ + +FGG L D +VLD T W E+ S G P P
Sbjct: 77 RAFHVAITIDCH-MFIFGGRSGGKRLGDFWVLDTGTYMLTFAADIWQWSELTSFGDLPTP 135
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-PPSRLGHSL 468
R + ++ I K+V+ GG D LSD Y++D + + W E+ S S PP R GH+
Sbjct: 136 RDFAAAAAIGSQKIVLCGGW-DGKKWLSDVYVMDTMSLE--WLELSVSGSLPPPRCGHTA 192
Query: 469 SVYGRTKVLMFGGLAKS----GHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
++ + ++L+FGG G L G ID E P W QL+
Sbjct: 193 TMVEK-RLLVFGGRGGGGPIMGDLWALKG---LIDEERETPGWTQLKL---------PGQ 239
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP---SEEKPSWRILNVPGQ-PP 580
P R H S ++ G G S ++ D W+ L + + PP
Sbjct: 240 APSSRCGHTVTSGGHYLLLFGGHGTGGWLSRYDVYYNDTIILDRVTAQWKRLPIGNEPPP 299
Query: 581 KFAWGHSTCVVGGTRVLVLGGHTGE 605
A+ TC+ G R L++GG G+
Sbjct: 300 PRAYHTMTCI--GARHLLIGGFDGK 322
>gi|119952737|ref|YP_950384.1| sensory box protein [Arthrobacter aurescens TC1]
gi|119951867|gb|ABM10776.1| Sensory Box Protein [Arthrobacter aurescens TC1]
Length = 727
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 9/96 (9%)
Query: 69 IIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQ 128
++Y NK FE TGY E+LGRNCR LQ P DP ++ +R L G F+
Sbjct: 64 VVYANKAFESVTGYSTAEMLGRNCRVLQ---------GPGSDPETIAMMRTVLGRGETFR 114
Query: 129 GELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
E+LN++K+GTP N L ++P+RD G +TH + +Q
Sbjct: 115 CEILNYRKNGTPFWNGLTVSPLRDAAGVITHFVSVQ 150
>gi|418062700|ref|ZP_12700460.1| signal transduction histidine kinase [Methylobacterium extorquens
DSM 13060]
gi|373563746|gb|EHP89914.1| signal transduction histidine kinase [Methylobacterium extorquens
DSM 13060]
Length = 492
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T +V D D PI++ N F TGY DE+LGRNCRFLQ P +P
Sbjct: 30 ATRMPMLVTDPNRTDNPIVFANAAFTKLTGYTRDEILGRNCRFLQ---------GPETNP 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V+ IR +E + + ELLN KKDG NRL ++P+ D DG +T+ Q
Sbjct: 81 YDVARIRDAIERRVPIEIELLNHKKDGEVFWNRLLVSPVFDRDGALTYFFASQF 134
>gi|346326927|gb|EGX96523.1| Zinc finger domain-containing protein, GATA-type [Cordyceps
militaris CM01]
Length = 963
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY + +++G+NCRFLQ D + A + VD
Sbjct: 327 AFVVCDVSMNDCPIIYVSDNFQNLTGYSSHDIVGQNCRFLQAPDGKVEAGTKREFVDNGA 386
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ ++E E Q L+N++K G P +N L + PI D V + IG QI
Sbjct: 387 VFNLKKMIQERREVQQSLINYRKGGKPFLNLLTMIPIPWDTDEVRYFIGFQI 438
>gi|115456439|ref|NP_001051820.1| Os03g0835800 [Oryza sativa Japonica Group]
gi|40714667|gb|AAR88573.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108711957|gb|ABF99752.1| Kelch motif family protein, expressed [Oryza sativa Japonica Group]
gi|113550291|dbj|BAF13734.1| Os03g0835800 [Oryza sativa Japonica Group]
gi|215736844|dbj|BAG95773.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 119/264 (45%), Gaps = 31/264 (11%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG-----APPLP 409
P R GHT S+ S +VVFGG + L+D+ V D++ + E +G A P P
Sbjct: 25 PAPRSGHTAVSIGKSKVVVFGGFADKRFLSDIAVYDVENRIWYTPECNGSGSDGQAGPSP 84
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSL 468
R++H + +I+ + + G G L D ++LD TD W E+ PS R +
Sbjct: 85 RAFHVAIVIDCNMFIFGG--RSGGKRLGDFWMLD--TDIWQWSELTGFGDLPSPREFAAA 140
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPP 528
S G K++M+GG L + Y +D E W +L S + VPPP
Sbjct: 141 SAIGNRKIVMYGGWDGKKWLS----DVYIMDTMSLE--WTEL---------SVTGSVPPP 185
Query: 529 RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLL----DPSEEKPSWRILNVPGQPPKFAW 584
R H A +M R+++FGG L+ L + E P W L +PGQ P
Sbjct: 186 RCGHSA-TMIEKRLLVFGGRGGAGPIMGDLWALKGVTEEDNETPGWTQLKLPGQSPSPRC 244
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWV 608
GHS GG +L+ GGH W+
Sbjct: 245 GHSV-TSGGPYLLLFGGHGTGGWL 267
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 17/149 (11%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLN----LDAANPEWRR 348
W + +V G+V P RC SA RL++FGG G M D + L D P W +
Sbjct: 173 WTELSVTGSVPPPRCGHSATMIEKRLLVFGGRGGAGPIMGDLWALKGVTEEDNETPGWTQ 232
Query: 349 VSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL-------NDVFVLDLDAKQPTWIE 400
+ + SP R GH+++S G +L++FGG G G L N+ +LD + Q +
Sbjct: 233 LKLPGQSPSPRCGHSVTS-GGPYLLLFGGHGTGGWLSRYDVYYNECIILDRVSVQWKLLA 291
Query: 401 VSGGAPPLPRSWHS-SCIIEGSKLVVSGG 428
S PP PR++HS +CI GS+ ++ GG
Sbjct: 292 TSNEPPP-PRAYHSMTCI--GSRFLLFGG 317
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W + T G + R +A A GNR ++ G + + D ++ +D + EW +SV
Sbjct: 122 WSELTGFGDLPSPREFAAASAIGNRKIVMYGGWDGKKWLSDVYI--MDTMSLEWTELSVT 179
Query: 353 SS-PPGRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVL----DLDAKQPTWIEVS-GGA 405
S PP R GH+ + + L+VFGG G G ++ D++ L + D + P W ++ G
Sbjct: 180 GSVPPPRCGHSATMIEKR-LLVFGGRGGAGPIMGDLWALKGVTEEDNETPGWTQLKLPGQ 238
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAG------VLLSDTYLLDLTTDKPMWREIPTSWS 459
P PR H S G L++ GG G V ++ +LD + + W+ + TS
Sbjct: 239 SPSPRCGH-SVTSGGPYLLLFGGHGTGGWLSRYDVYYNECIILDRVSVQ--WKLLATSNE 295
Query: 460 -PPSRLGHSLSVYGRTKVLMFGGL 482
PP R HS++ G ++ L+FGG
Sbjct: 296 PPPPRAYHSMTCIG-SRFLLFGGF 318
>gi|400592670|gb|EJP60778.1| white-collar 1 [Beauveria bassiana ARSEF 2860]
Length = 963
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY + +++G+NCRFLQ D + A + VD
Sbjct: 326 AFVVCDVSMNDCPIIYVSDNFQNLTGYSSHDIVGQNCRFLQAPDGKVEAGTKREFVDNGT 385
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ ++E E Q L+N++K G P +N L + PI D V + IG QI
Sbjct: 386 VFNLKKMIQERQEVQQSLINYRKGGKPFLNLLTMIPIPWDTDEVRYFIGFQI 437
>gi|330795519|ref|XP_003285820.1| hypothetical protein DICPUDRAFT_149727 [Dictyostelium purpureum]
gi|325084199|gb|EGC37632.1| hypothetical protein DICPUDRAFT_149727 [Dictyostelium purpureum]
Length = 832
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 37/279 (13%)
Query: 345 EWRRVSVKSSPPGRWGHTLSSL-NGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
E ++VS+ SP RWGHT +L NGS +VFGG + ND+ ++ + IE G
Sbjct: 4 ECKKVSLIGSPEPRWGHTSITLPNGSGFIVFGGNSNRAF-NDIQYYNIQNNSWSKIEAVG 62
Query: 404 GAPPLPRSWHSSCIIEG-------SKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPT 456
P R HS+ + + S ++ G SD +L + T
Sbjct: 63 NTPS-ERYGHSAALYQSQNRPYSDSYQIIFFGGRATSKPFSDINILYVNI---------T 112
Query: 457 SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFT 516
+ S R GH+ VY R +++FGG S Y +D +WKQ C
Sbjct: 113 NKSVEGRAGHTSVVY-RNYLIVFGGHNNHKSKYYSSVLGYNLDTN----EWKQQSC---- 163
Query: 517 GVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVP 576
S V+P R H + ++ IFGG G + ++ LD + +W+ +
Sbjct: 164 -----SGVIPSARATHCTFQIN-NKMFIFGG-YDGKKYYNDVYYLDL--DTFTWKKVEPK 214
Query: 577 GQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHEL 615
G PK GHS ++ ++++ GG + LN++H L
Sbjct: 215 GIAPKPRSGHSATLISNNKLMIFGGCGSDSNFLNDIHIL 253
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 306 RCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSS-PPGRWGHTLS 364
R ++ N L++FGG N + + VL + EW++ S P R H
Sbjct: 119 RAGHTSVVYRNYLIVFGGHN-NHKSKYYSSVLGYNLDTNEWKQQSCSGVIPSARATHCTF 177
Query: 365 SLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKL 423
+N + +FGG + NDV+ LDLD TW +V G P PRS HS+ +I +KL
Sbjct: 178 QINNK-MFIFGGYDGKKYYNDVYYLDLDT--FTWKKVEPKGIAPKPRSGHSATLISNNKL 234
Query: 424 VVSGGCTDAGVLLSDTYLLDLTT------DKPMWREIPTSWSPPSRLGHSLSVYGRTKVL 477
++ GGC L+D ++L + ++P + I P +R H+ + G ++
Sbjct: 235 MIFGGCGSDSNFLNDIHILHIDGVNEYHWEQPQYMGIEI---PQARFRHTTNFIG-GRMY 290
Query: 478 MFGGLAKSGHL 488
++ G SG+L
Sbjct: 291 IYAGTG-SGNL 300
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
L+ W++ + G + +R N++ +FGG + +D + L+LD W
Sbjct: 152 NLDTNEWKQQSCSGVIPSARATHCTFQINNKMFIFGGYD-GKKYYNDVYYLDLDTF--TW 208
Query: 347 RRVSVKS-SPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDA------KQPTW 398
++V K +P R GH+ + ++ + L++FGGCG LND+ +L +D +QP +
Sbjct: 209 KKVEPKGIAPKPRSGHSATLISNNKLMIFGGCGSDSNFLNDIHILHIDGVNEYHWEQPQY 268
Query: 399 IEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD--KPMWREIPT 456
+ G P R H++ I G + +G T +G L+ D + L+ D P+ IP+
Sbjct: 269 M---GIEIPQARFRHTTNFIGGRMYIYAG--TGSGNLMGDLHQLEFFDDNNNPLVPIIPS 323
>gi|302793276|ref|XP_002978403.1| hypothetical protein SELMODRAFT_418266 [Selaginella moellendorffii]
gi|300153752|gb|EFJ20389.1| hypothetical protein SELMODRAFT_418266 [Selaginella moellendorffii]
Length = 729
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 37/274 (13%)
Query: 281 LARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGG-EGVNMQPMDDTFVLNL 339
++ +LTT+ W F G +R + SA G ++V+FGG G N ++D +L+L
Sbjct: 31 MSLDLTTMS---WSSFACTGQQPGTRDSHSAVLHGRKMVIFGGTNGSNK--INDVHILDL 85
Query: 340 DAANPEWRRVSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGR--QGLLNDVFVLDLDAKQP 396
D W +V+ +PP R H+ + ++G+ +V+FGG G LND+ +L+LD +
Sbjct: 86 DTH--VWSCPTVEGQAPPPRESHSATLVDGNRVVIFGGTGEGDGNYLNDIHILELDRMR- 142
Query: 397 TWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP 455
W+ + G P+ R H++ ++ +V G C D + D + L T W +I
Sbjct: 143 -WVSPAVNGELPVCRDSHTAVAVKDQLVVYGGDCGDRYLSEVDVFNLKTFT----WSKID 197
Query: 456 TSWS--PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECN 513
T+ S P R GH ++V KV +FGG+ R + + +DL +W Q E
Sbjct: 198 TAGSLQPAVRAGH-VAVAAENKVYVFGGVGD----RAYYNDVWVLDLSSW--KWSQAEV- 249
Query: 514 AFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG 547
+ + P R HVAV + I I+GG
Sbjct: 250 --------AGLQPQGRFSHVAV-LRDDDIAIYGG 274
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 132/290 (45%), Gaps = 29/290 (10%)
Query: 336 VLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQ 395
V++LD W + PG + L+G +V+FGG +NDV +LDLD
Sbjct: 30 VMSLDLTTMSWSSFACTGQQPGTRDSHSAVLHGRKMVIFGGTNGSNKINDVHILDLDTHV 89
Query: 396 PTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREI 454
+ V G APP PR HS+ +++G+++V+ GG + G L+D ++L+L D+ W
Sbjct: 90 WSCPTVEGQAPP-PRESHSATLVDGNRVVIFGGTGEGDGNYLNDIHILEL--DRMRWVSP 146
Query: 455 PTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQWKQLE 511
+ P +V + +++++GG D GD E L+
Sbjct: 147 AVNGELPVCRDSHTAVAVKDQLVVYGG-----------------DCGDRYLSEVDVFNLK 189
Query: 512 CNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
++ + + ++ P R HVAV+ ++ +FGG + + +++LD S K W
Sbjct: 190 TFTWSKIDTAGSLQPAVRAGHVAVAAE-NKVYVFGG-VGDRAYYNDVWVLDLSSWK--WS 245
Query: 572 ILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
V G P+ + H V+ + + GG +E L+E+ L L +Q
Sbjct: 246 QAEVAGLQPQGRFSH-VAVLRDDDIAIYGGCGEDERPLDEVLVLHLGIEQ 294
>gi|330792869|ref|XP_003284509.1| hypothetical protein DICPUDRAFT_96736 [Dictyostelium purpureum]
gi|325085539|gb|EGC38944.1| hypothetical protein DICPUDRAFT_96736 [Dictyostelium purpureum]
Length = 491
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 288 LEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWR 347
LE + W + T G +R + S C+ G R++LFGG G + +LD +W
Sbjct: 209 LETLTWSEPTTSGEAPSARSSHSVCSVGKRMILFGGSGARY----SNELFSLDTTTMKWT 264
Query: 348 RVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
+ V +PP RW HT+ S G ++ FGG + N V++LD D + + SG
Sbjct: 265 KHDVLGTPPSERWCHTMCSF-GKKVITFGGSNDKRKDNKVYILDTDTMEWSQPPTSGNC- 322
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGH 466
P+PR H++ I G ++V GG L+D Y+L+ T K + +I T P R H
Sbjct: 323 PIPRQLHTAVAI-GESMIVFGGWGKHQE-LNDLYILNTRTMKWVCPKIETV-VPCCRQLH 379
Query: 467 SLSVYGRTKVLMFGGLAKSGHL 488
S VY K+ GG K+ +
Sbjct: 380 SAWVYN-GKMYTLGGYFKNKRM 400
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 147/329 (44%), Gaps = 48/329 (14%)
Query: 306 RCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKS-SPPGRWGHTLS 364
R + C N++VLFGG ++D + L LD W + K +P GR+ H+
Sbjct: 127 RHGHTTCLYKNKVVLFGGTPDGSHGLNDIYFLLLDTFT--WVEIKTKGITPNGRYRHSAI 184
Query: 365 SLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIE-VSGGAPPLPRSWHSSCIIEGSKL 423
+ + +FGG R LND+ VLDL+ TW E + G P RS HS C + G ++
Sbjct: 185 IIEDK-MFIFGGY-RSKCLNDLHVLDLETL--TWSEPTTSGEAPSARSSHSVCSV-GKRM 239
Query: 424 VVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVLMFGGL 482
++ GG ++ + LD TT K W + +PPS R H++ +G+ KV+ FGG
Sbjct: 240 ILFGG--SGARYSNELFSLDTTTMK--WTKHDVLGTPPSERWCHTMCSFGK-KVITFGG- 293
Query: 483 AKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRI 542
+ + + + Y +D E W Q S P PR H AV++ +
Sbjct: 294 ---SNDKRKDNKVYILDTDTME--WSQ---------PPTSGNCPIPRQLHTAVAI-GESM 338
Query: 543 IIFGGSIAGLHSP-SQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 601
I+FGG G H + L++L+ K W + P HS V G ++ LGG
Sbjct: 339 IVFGG--WGKHQELNDLYILNTRTMK--WVCPKIETVVPCCRQLHSAWVYNG-KMYTLGG 393
Query: 602 HTGEEWVLN-----------ELHELCLAS 619
+ + +++ L ELC+ +
Sbjct: 394 YFKNKRMIDVYCFKPDQTVSSLRELCIET 422
>gi|448689107|ref|ZP_21694844.1| HTR-like protein [Haloarcula japonica DSM 6131]
gi|445778977|gb|EMA29919.1| HTR-like protein [Haloarcula japonica DSM 6131]
Length = 726
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P + D PD P+IY N + TGY E+LG+NCR LQ + DP
Sbjct: 281 PVGVTITDPDQPDNPLIYANDHYRDLTGYSLSELLGKNCRILQGEN---------TDPAP 331
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ +R ++ EL N++KDGT NR+ +AP+RDDDG V + +G Q
Sbjct: 332 VTRMRDAIDAEERVTVELRNYRKDGTEFWNRVHIAPVRDDDGAVVNYVGFQ 382
>gi|159043684|ref|YP_001532478.1| putative signal transduction histidine kinase [Dinoroseobacter
shibae DFL 12]
gi|157911444|gb|ABV92877.1| putative signal transduction histidine kinase [Dinoroseobacter
shibae DFL 12]
Length = 338
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 10/140 (7%)
Query: 39 TELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR 98
T L + L + + V+ + D PI+YVN FE TGY +GRNCRFLQ
Sbjct: 8 TVLDDREALAGFSRARVAMVLTNPNIHDNPIVYVNDAFERVTGYSRTAAIGRNCRFLQ-- 65
Query: 99 DPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVT 158
+ D V+++RR +E + ++LN++ G P +NRL +AP++ DDG
Sbjct: 66 -------GSMTDDADVAKLRRAIEREEDVTVDILNYRASGEPFLNRLIIAPVKSDDGKCH 118
Query: 159 HIIGIQ-IFSEAKIDLNHVS 177
+ IGIQ S+ ID + +S
Sbjct: 119 YFIGIQKAMSDRDIDSSTLS 138
>gi|384251337|gb|EIE24815.1| hypothetical protein COCSUDRAFT_46955 [Coccomyxa subellipsoidea
C-169]
Length = 1327
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+AD PD P++YVN+ F TGY +E++GRNCRFLQ P DP V
Sbjct: 387 ITIADPNLPDCPLMYVNEAFCRMTGYAREEIIGRNCRFLQ---------GPDTDPASVVR 437
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR LE+ E E+LN+KK+G N L + P+ + G V IG+Q
Sbjct: 438 IREALEQKREVSLEILNYKKNGDKFWNLLSMMPVCNAAGAVVSFIGVQ 485
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 61/122 (50%), Gaps = 20/122 (16%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T + ++ DA PD PIIYVN F GY EV+GRN RF+Q P DP
Sbjct: 247 TSEATLITDAAQPDNPIIYVNSGFIKLLGYTMGEVVGRNARFMQ---------GPDSDPE 297
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLR-----------LAPIRDDDGTVTHII 161
V+E+R + G EL+N +KDG+ N+ R + PI+D G VT+ +
Sbjct: 298 AVAELRDAVRTGRATVVELINLRKDGSRFWNQARPLLRFCPGFVSMTPIKDSSGFVTNFV 357
Query: 162 GI 163
G+
Sbjct: 358 GV 359
>gi|293331111|ref|NP_001170190.1| uncharacterized protein LOC100384139 [Zea mays]
gi|224034177|gb|ACN36164.1| unknown [Zea mays]
gi|414873805|tpg|DAA52362.1| TPA: hypothetical protein ZEAMMB73_960431 [Zea mays]
Length = 500
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 118/264 (44%), Gaps = 31/264 (11%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG-----APPLP 409
P R GHT + S +VVFGG + L DV V D++ K E +G A P P
Sbjct: 24 PAPRSGHTAVIIGKSKVVVFGGFADKRFLADVSVYDVENKLWYTPECTGNGSDGQAGPSP 83
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSL 468
R++H + +I+ + + G G L D ++LD TD W E+ PS R +
Sbjct: 84 RAFHIAVVIDCNMFIFGG--RSGGKRLGDFWMLD--TDLWQWSEMTGFGDLPSPREFAAA 139
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPP 528
S G K++M+GG L + Y +D E W +L A TG VPPP
Sbjct: 140 SAIGNRKIVMYGGWDGKKWL----SDVYIMDTMSLE--WTEL---AVTG------SVPPP 184
Query: 529 RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLL----DPSEEKPSWRILNVPGQPPKFAW 584
R H A +M R++IFGG L+ L + E P W L +PGQ P
Sbjct: 185 RCGHSA-TMIEKRLLIFGGRGGAGPIMGDLWALKGITEEDNEAPGWTQLKLPGQSPSPRC 243
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWV 608
GHS GG +L+ GGH W+
Sbjct: 244 GHS-VTSGGPYLLLFGGHGTGGWL 266
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 13/147 (8%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLN----LDAANPEWRR 348
W + V G+V P RC SA RL++FGG G M D + L D P W +
Sbjct: 172 WTELAVTGSVPPPRCGHSATMIEKRLLIFGGRGGAGPIMGDLWALKGITEEDNEAPGWTQ 231
Query: 349 VSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLN--DVFV---LDLDAKQPTWIEV- 401
+ + SP R GH+++S G +L++FGG G G L+ DV+ + LD W +
Sbjct: 232 LKLPGQSPSPRCGHSVTS-GGPYLLLFGGHGTGGWLSRYDVYYNECIILDRVSVQWKRLP 290
Query: 402 SGGAPPLPRSWHSSCIIEGSKLVVSGG 428
+ PP PR++HS I GS+ ++ GG
Sbjct: 291 TSNEPPPPRAYHSITSI-GSRFLLFGG 316
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 21/204 (10%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W + T G + R +A A GNR ++ G + + D ++ +D + EW ++V
Sbjct: 121 WSEMTGFGDLPSPREFAAASAIGNRKIVMYGGWDGKKWLSDVYI--MDTMSLEWTELAVT 178
Query: 353 SS-PPGRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVL----DLDAKQPTWIEVS-GGA 405
S PP R GH+ + + L++FGG G G ++ D++ L + D + P W ++ G
Sbjct: 179 GSVPPPRCGHSATMIEKR-LLIFGGRGGAGPIMGDLWALKGITEEDNEAPGWTQLKLPGQ 237
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAG------VLLSDTYLLDLTTDKPMWREIPTSWS 459
P PR H S G L++ GG G V ++ +LD + + W+ +PTS
Sbjct: 238 SPSPRCGH-SVTSGGPYLLLFGGHGTGGWLSRYDVYYNECIILDRVSVQ--WKRLPTSNE 294
Query: 460 -PPSRLGHSLSVYGRTKVLMFGGL 482
PP R HS++ G ++ L+FGG
Sbjct: 295 PPPPRAYHSITSIG-SRFLLFGGF 317
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVN--MQPMDDTF--VLNLDAANP 344
EA W + + G RC S + G L+LFGG G + D + + LD +
Sbjct: 225 EAPGWTQLKLPGQSPSPRCGHSVTSGGPYLLLFGGHGTGGWLSRYDVYYNECIILDRVSV 284
Query: 345 EWRRVSVKSS-PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVL 389
+W+R+ + PP R H+++S+ GS ++FGG + D++ L
Sbjct: 285 QWKRLPTSNEPPPPRAYHSITSI-GSRFLLFGGFDGKNTFGDLWWL 329
>gi|346976853|gb|EGY20305.1| hypothetical protein VDAG_02321 [Verticillium dahliae VdLs.17]
Length = 1112
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD--PRAQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ D A + VD
Sbjct: 500 AFVVCDMSLNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQAPDGAVEAGSKREFVDDAA 559
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI DD + +G QI
Sbjct: 560 VYNLKQKIHEGKEVQQSLINYRKGGKPFLNLLTMIPIPWDDPDEIRFFVGFQI 612
>gi|119493187|ref|ZP_01624062.1| Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL
domains) with PAS/PAC sensors [Lyngbya sp. PCC 8106]
gi|119452752|gb|EAW33929.1| Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL
domains) with PAS/PAC sensors [Lyngbya sp. PCC 8106]
Length = 1090
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
++ DA + D PIIYVN FE TGY +EV+ +NCRFLQ P D +V +
Sbjct: 405 IITDATETDHPIIYVNAGFERITGYSKEEVIEQNCRFLQ---------GPQTDSSLVERL 455
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R L +G E + + N++KDG N L++AP+ +D G +TH IG+Q
Sbjct: 456 RTALLQGRECRVVIQNYRKDGRLFWNDLQIAPVFNDRGHLTHFIGVQ 502
>gi|352100624|ref|ZP_08958211.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Halomonas sp. HAL1]
gi|350601044|gb|EHA17099.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Halomonas sp. HAL1]
Length = 927
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
++ ++ DA P++YVN FE TGY E LGRNCRFLQ D DP
Sbjct: 376 SSTNGVIIVDAQSSALPMVYVNAAFERITGYSRSEALGRNCRFLQGED---------TDP 426
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V +R + E E + N+++DG+ N L ++P+RD+ G VTH +G+Q
Sbjct: 427 ATVKLLREGVTEQHEVHVVIRNYRRDGSIFWNDLYISPVRDETGDVTHYLGVQ 479
>gi|124267680|ref|YP_001021684.1| signal transduction histidine kinase-like protein [Methylibium
petroleiphilum PM1]
gi|124260455|gb|ABM95449.1| signal transduction histidine kinase-like protein [Methylibium
petroleiphilum PM1]
Length = 1317
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
VVADA PD P+IY N FE +G D+V+GRNCRFLQ D D ++
Sbjct: 555 MVVADATQPDLPLIYANTAFERLSGLPLDQVIGRNCRFLQAGDR---------DQPGLTR 605
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R L L N + DGT +N L +AP+RD G VTH +G+Q
Sbjct: 606 LREALAAERACSVTLRNQRADGTSFINELHVAPVRDTLGRVTHYVGVQ 653
>gi|170749732|ref|YP_001755992.1| signal transduction histidine kinase [Methylobacterium
radiotolerans JCM 2831]
gi|170656254|gb|ACB25309.1| signal transduction histidine kinase [Methylobacterium
radiotolerans JCM 2831]
Length = 503
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 39 TELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR 98
T+ S P + T ++ D PD PI++VN F TGYR DE++GRNCRFLQ
Sbjct: 25 TDASTDPFVSAVRATRMPMLITDPHQPDNPIVFVNAAFSKLTGYRHDEIIGRNCRFLQGA 84
Query: 99 DPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVT 158
+ + +++IR + + + ELLN KK G NRL ++P+ D DG +T
Sbjct: 85 E---------TNKADIAKIRAAIARRVPIEIELLNHKKSGEVFWNRLLISPVFDRDGELT 135
Query: 159 HIIGIQI 165
+ Q
Sbjct: 136 YFFASQF 142
>gi|344201766|ref|YP_004786909.1| multi-sensor signal transduction histidine kinase [Muricauda
ruestringensis DSM 13258]
gi|343953688|gb|AEM69487.1| multi-sensor signal transduction histidine kinase [Muricauda
ruestringensis DSM 13258]
Length = 848
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+++A FPIIYVNK FE TGY ++EV+G+NC FLQ D + Q V
Sbjct: 159 IVISNAQLKQFPIIYVNKAFEKNTGYTSEEVIGKNCNFLQLDDRQQQE---------VQI 209
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
I L E+ N+KKDGT N L + P+RD G TH IGIQ
Sbjct: 210 IGEALSTQSPCHVEIRNYKKDGTLFWNELSITPVRDFHGETTHFIGIQ 257
>gi|302773656|ref|XP_002970245.1| hypothetical protein SELMODRAFT_441110 [Selaginella moellendorffii]
gi|300161761|gb|EFJ28375.1| hypothetical protein SELMODRAFT_441110 [Selaginella moellendorffii]
Length = 778
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 37/274 (13%)
Query: 281 LARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGG-EGVNMQPMDDTFVLNL 339
++ +LTT+ W F G +R + SA G ++V+FGG G N ++D +L+L
Sbjct: 31 MSLDLTTMS---WSSFACTGQQPGTRDSHSAVLHGRKMVIFGGTNGSNK--INDVHILDL 85
Query: 340 DAANPEWRRVSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGR--QGLLNDVFVLDLDAKQP 396
D W +V+ +PP R H+ + ++G+ +V+FGG G LND+ +L+LD +
Sbjct: 86 DTH--VWSCPTVEGQAPPPRESHSATLVDGNRVVIFGGTGEGDGNYLNDIHILELDRMR- 142
Query: 397 TWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP 455
W+ + G P+ R H++ ++ +V G C D + D + L T W +I
Sbjct: 143 -WVSPAVNGELPVCRDSHTAVAVKDQLVVYGGDCGDRYLSEVDVFNLKTFT----WSKID 197
Query: 456 TSWS--PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECN 513
T+ S P R GH ++V KV +FGG+ R + + +DL +W Q E
Sbjct: 198 TAGSLQPAVRAGH-VAVAAENKVYVFGGVGD----RAYYNDVWVLDLSSW--KWSQAEV- 249
Query: 514 AFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG 547
+ + P R HVAV + I I+GG
Sbjct: 250 --------AGLQPQGRFSHVAV-LRDDDIAIYGG 274
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 132/290 (45%), Gaps = 29/290 (10%)
Query: 336 VLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQ 395
V++LD W + PG + L+G +V+FGG +NDV +LDLD
Sbjct: 30 VMSLDLTTMSWSSFACTGQQPGTRDSHSAVLHGRKMVIFGGTNGSNKINDVHILDLDTHV 89
Query: 396 PTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREI 454
+ V G APP PR HS+ +++G+++V+ GG + G L+D ++L+L D+ W
Sbjct: 90 WSCPTVEGQAPP-PRESHSATLVDGNRVVIFGGTGEGDGNYLNDIHILEL--DRMRWVSP 146
Query: 455 PTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQWKQLE 511
+ P +V + +++++GG D GD E L+
Sbjct: 147 AVNGELPVCRDSHTAVAVKDQLVVYGG-----------------DCGDRYLSEVDVFNLK 189
Query: 512 CNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
++ + + ++ P R HVAV+ ++ +FGG + + +++LD S K W
Sbjct: 190 TFTWSKIDTAGSLQPAVRAGHVAVAAE-NKVYVFGG-VGDRAYYNDVWVLDLSSWK--WS 245
Query: 572 ILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
V G P+ + H V+ + + GG +E L+E+ L L +Q
Sbjct: 246 QAEVAGLQPQGRFSH-VAVLRDDDIAIYGGCGEDERPLDEVLVLHLGIEQ 294
>gi|296283304|ref|ZP_06861302.1| hypothetical protein CbatJ_06766 [Citromicrobium bathyomarinum
JL354]
Length = 335
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 36 GDDTELSLKPGLLF---YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNC 92
G + S G+LF T + ++D PD PI++ N+ F TGY DE+LGRNC
Sbjct: 5 GHEDRFSDTSGVLFEQAMAQTRMAVCLSDPNLPDQPIVFANRAFRRLTGYDEDEILGRNC 64
Query: 93 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRD 152
RFLQ P D V+ +R +E ELLN++KDGT N L L PI D
Sbjct: 65 RFLQ---------GPKTDRAEVARVREAIENEDVVVVELLNYRKDGTEFWNALHLGPIYD 115
Query: 153 DDGTVTHIIGIQ 164
G + + G Q
Sbjct: 116 AQGKLLYFFGSQ 127
>gi|257051404|ref|YP_003129237.1| bacterio-opsin activator [Halorhabdus utahensis DSM 12940]
gi|256690167|gb|ACV10504.1| putative PAS/PAC sensor protein [Halorhabdus utahensis DSM 12940]
Length = 680
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P +ADA PD P+IYVN F TGY ++ +G NCRFLQ A+
Sbjct: 161 PVGITIADATAPDKPLIYVNDSFVEMTGYEKEDAIGVNCRFLQGEGTDAE---------T 211
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
E+R + + EL N++ DG+ N L ++PIRDDDGTVT+ +G Q
Sbjct: 212 TLELREAVMDEQAAAVELRNYRADGSTFWNNLEISPIRDDDGTVTNFVGFQ 262
>gi|448472546|ref|ZP_21601170.1| bacterio-opsin activator [Halorubrum aidingense JCM 13560]
gi|445819850|gb|EMA69684.1| bacterio-opsin activator [Halorubrum aidingense JCM 13560]
Length = 667
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D PD+P+++VN +E TGY + LGRN RFLQ P DP+
Sbjct: 150 PIGISLSDPDLPDYPLVHVNDAWEDHTGYPVEAALGRNPRFLQ---------GPGTDPMT 200
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V + + ++ + E+ N+++DGTP N L +AP+ DDDG + H +G Q
Sbjct: 201 VERLSKAIQREDQITVEIRNYRRDGTPFWNELTVAPVYDDDGELAHYVGFQ 251
>gi|338998341|ref|ZP_08637015.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Halomonas sp. TD01]
gi|338764658|gb|EGP19616.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Halomonas sp. TD01]
Length = 816
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
++ V+ DA D PI+YVN FE TGY D LG+NCRFLQ + DP
Sbjct: 259 SSTNGVVIVDAQQHDLPIVYVNAAFERITGYSRDTALGQNCRFLQGEE---------TDP 309
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ ++R+ + E + N +++G P N L ++P+RD G VTH +G+Q
Sbjct: 310 ATLKKLRKGIYSQQEVHVVIRNHRRNGMPFWNDLYISPVRDATGAVTHFVGVQ 362
>gi|145350313|ref|XP_001419556.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579788|gb|ABO97849.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 110
Score = 84.3 bits (207), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 59 VADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIR 118
+AD PD P+IY N FE+ TGY E +G NCRFLQ P D ++++R
Sbjct: 10 IADFTQPDQPLIYANVGFEVMTGYSVQETVGHNCRFLQ---------GPGTDQNELNKLR 60
Query: 119 RCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+++G L N+KK G +N+L L PIRD DG V + +GIQ
Sbjct: 61 NAIKKGEAVTVVLKNYKKSGEEFMNQLSLTPIRDADGQVMYYVGIQ 106
>gi|433592375|ref|YP_007281871.1| PAS domain S-box [Natrinema pellirubrum DSM 15624]
gi|433307155|gb|AGB32967.1| PAS domain S-box [Natrinema pellirubrum DSM 15624]
Length = 627
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 27 SFEGGGGGGGDDTELSLKPGLLF----YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGY 82
+F+ G G D+ L+ L P ++D D P++YVN+ +E TGY
Sbjct: 104 TFDRGATGADDEGALAGTRDRLVKDRALEEAPVGITISDPDMEDNPLVYVNEAYEEMTGY 163
Query: 83 RADEVLGRNCRFLQYRDPRAQRRHPLVD------PVVVSEIRRCLEEGIEFQGELLNFKK 136
DEV+GRNCRFLQ D + PV V EL N++K
Sbjct: 164 EYDEVVGRNCRFLQGEDSSEAAIAEMAAAVAEDYPVTV---------------ELKNYRK 208
Query: 137 DGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
DGT N + +AP+RD+DGTVT+ +G Q
Sbjct: 209 DGTEFWNEVTIAPVRDEDGTVTNYVGFQ 236
>gi|209526785|ref|ZP_03275306.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Arthrospira maxima CS-328]
gi|423066822|ref|ZP_17055612.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Arthrospira platensis C1]
gi|209492746|gb|EDZ93080.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Arthrospira maxima CS-328]
gi|406711587|gb|EKD06787.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Arthrospira platensis C1]
Length = 1276
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
++ DA + D +I+ N FE TGY +V+GRNCRFLQ RD DP ++E
Sbjct: 346 IIITDATESDNRVIFANSGFEKITGYSRHQVIGRNCRFLQGRDS---------DPKALAE 396
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R +EEG E EL ++ DG+ N L ++P+ ++ G +T+ IGIQ
Sbjct: 397 LRSAIEEGRECNIELKKYRPDGSSFWNELSISPVYNNQGFLTNFIGIQ 444
>gi|15790465|ref|NP_280289.1| bacterio-opsin activator [Halobacterium sp. NRC-1]
gi|169236201|ref|YP_001689401.1| bacterio-opsin activator [Halobacterium salinarum R1]
gi|47115564|sp|Q9HPU8.1|BAT_HALSA RecName: Full=Bacterioopsin transcriptional activator
gi|10580961|gb|AAG19769.1| bacterio-opsin activator [Halobacterium sp. NRC-1]
gi|167727267|emb|CAP14053.1| bacterioopsin activator Bat [Halobacterium salinarum R1]
Length = 674
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 9/112 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++DA DP+ PIIY+N FE TGY DEV+G N RFLQ P +
Sbjct: 168 PIGITISDATDPEEPIIYINDSFEDITGYSPDEVVGANHRFLQ---------GPKTNEDR 218
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V+E + E + Q L N+++DG+ N++ ++PI D+DGTV+H +G Q+
Sbjct: 219 VAEFWTAITEDHDTQVVLRNYRRDGSLFWNQVDISPIYDEDGTVSHYVGFQM 270
>gi|376003464|ref|ZP_09781274.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) and
GGDEF and EAL domains (modular protein) [Arthrospira sp.
PCC 8005]
gi|375328121|emb|CCE17027.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) and
GGDEF and EAL domains (modular protein) [Arthrospira sp.
PCC 8005]
Length = 1279
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
++ DA + D +I+ N FE TGY +V+GRNCRFLQ RD DP ++E
Sbjct: 349 IIITDATESDNRVIFANSGFEKITGYSRHQVIGRNCRFLQGRDS---------DPKALAE 399
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R +EEG E EL ++ DG+ N L ++P+ ++ G +T+ IGIQ
Sbjct: 400 LRSAIEEGRECNIELKKYRPDGSSFWNELSISPVYNNQGFLTNFIGIQ 447
>gi|414881997|tpg|DAA59128.1| TPA: blue-light receptor phototropin 1 [Zea mays]
Length = 761
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 9/87 (10%)
Query: 79 FTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDG 138
TGY ++EV+GRNCRFLQ DPV +S+IR+ L G + G +LN+KKDG
Sbjct: 1 MTGYSSNEVVGRNCRFLQGSG---------TDPVEISKIRQALAAGSNYCGRILNYKKDG 51
Query: 139 TPLVNRLRLAPIRDDDGTVTHIIGIQI 165
TP N L +API+D+DG V IG+Q+
Sbjct: 52 TPFWNLLTVAPIKDEDGRVLKFIGMQV 78
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 252 NFVITDPRLPDNPIIFASDSFLRLTEYCREEILGRNCRFLQ---------GPETDRGTVK 302
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 303 KIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 352
>gi|406835512|ref|ZP_11095106.1| PAS domain S-box [Schlesneria paludicola DSM 18645]
Length = 925
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 65 PDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEG 124
P+ I+ N F TGY+ +EVLGRNC FLQ PL D + IR L G
Sbjct: 152 PNHLILSANPAFSFITGYQKEEVLGRNCSFLQ---------GPLTDQSTIQAIRDALNNG 202
Query: 125 IEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
+F GE+ N++KDGT N L ++P+ D+ +TH IG+
Sbjct: 203 TDFTGEIFNYRKDGTAFWNELTVSPVYDEREYLTHFIGV 241
>gi|350631731|gb|EHA20102.1| hypothetical protein ASPNIDRAFT_119885 [Aspergillus niger ATCC
1015]
Length = 745
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
+FV+ D D PI+YV++ FE TGY E++G+NCRFLQ D QR + VD
Sbjct: 197 AFVLCDITLEDHPIVYVSEAFERLTGYTNQEIVGQNCRFLQGPDGVVQRGMQRKFVDENT 256
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
+R +EE E Q ++N++K G P VN + + PIR +G Q +DL
Sbjct: 257 AYRLRSTIEERTEIQASIINYRKGGQPFVNLITMIPIRWGGSDYRFYVGFQ------VDL 310
Query: 174 NHVSYPVFKENCNQQY 189
V + N N Y
Sbjct: 311 VETPDAVTRRNPNGTY 326
>gi|448333722|ref|ZP_21522911.1| bacterio-opsin activator [Natrinema pellirubrum DSM 15624]
gi|445621601|gb|ELY75072.1| bacterio-opsin activator [Natrinema pellirubrum DSM 15624]
Length = 657
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 27 SFEGGGGGGGDDTELSLKPGLLF----YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGY 82
+F+ G G D+ L+ L P ++D D P++YVN+ +E TGY
Sbjct: 104 TFDRGATGADDEGALAGTRDRLVKDRALEEAPVGITISDPDMEDNPLVYVNEAYEEMTGY 163
Query: 83 RADEVLGRNCRFLQYRDPRAQRRHPLVD------PVVVSEIRRCLEEGIEFQGELLNFKK 136
DEV+GRNCRFLQ D + PV V EL N++K
Sbjct: 164 EYDEVVGRNCRFLQGEDSSEAAIAEMAAAVAEDYPVTV---------------ELKNYRK 208
Query: 137 DGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
DGT N + +AP+RD+DGTVT+ +G Q
Sbjct: 209 DGTEFWNEVTIAPVRDEDGTVTNYVGFQ 236
>gi|449477505|ref|XP_004155043.1| PREDICTED: uncharacterized protein LOC101224155 [Cucumis sativus]
Length = 535
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 23/208 (11%)
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
W + ++G+ R + + G+ L +FGG M P+ D ++L D + W S+
Sbjct: 10 TWSQPVIKGSPPTPRDSHTCTTIGDNLFVFGGTD-GMSPLKDLYIL--DTSMHTWICPSL 66
Query: 352 KSS-PPGRWGHTLSSLNGSWLVVFGGCGR------QGLLNDVFVLDLDA---KQPTWIEV 401
+ + P R GH+ ++L G L +FGGCG+ + ND+++L+ + KQ T +
Sbjct: 67 RGNGPEAREGHS-ATLVGKRLFIFGGCGKSTSNNDEVYYNDLYILNTETFVWKQATTM-- 123
Query: 402 SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-P 460
G PP PR H +C +K++V GG LSD ++LD TD +W E+ TS
Sbjct: 124 --GTPPSPRDSH-TCSSWKNKVIVIGGEDAHDYYLSDVHILD--TDTLVWTELNTSGQLL 178
Query: 461 PSRLGHSLSVYGRTKVLMFGGLAKSGHL 488
P R GH+ +GR+ + +FGG + +L
Sbjct: 179 PPRAGHTTIAFGRS-LFVFGGFTDAQNL 205
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 297 TVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE---WRRVSVKS 353
++RG +R SA G RL +FGG G + D+ + +L N E W++ +
Sbjct: 65 SLRGNGPEAREGHSATLVGKRLFIFGGCGKSTSNNDEVYYNDLYILNTETFVWKQATTMG 124
Query: 354 SPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSW 412
+PP R HT SS +V+ G L+DV +LD D T + SG P PR+
Sbjct: 125 TPPSPRDSHTCSSWKNKVIVIGGEDAHDYYLSDVHILDTDTLVWTELNTSGQLLP-PRAG 183
Query: 413 HSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSR----LGHSL 468
H++ I G L V GG TDA L +D ++LD+ + +W +I T PS G L
Sbjct: 184 HTT-IAFGRSLFVFGGFTDAQNLYNDLHMLDI--ENGVWTKITTMGDGPSARFSVAGDCL 240
Query: 469 SVYGRTKVLMFGGLAK 484
Y + + GG K
Sbjct: 241 DPYKVGTLALLGGCNK 256
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 106/229 (46%), Gaps = 29/229 (12%)
Query: 393 AKQPTWIE-VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMW 451
AKQ TW + V G+PP PR H +C G L V GG TD L D Y+LD + +
Sbjct: 7 AKQ-TWSQPVIKGSPPTPRDSH-TCTTIGDNLFVFGG-TDGMSPLKDLYILDTSMHTWIC 63
Query: 452 REIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTID---LGDEEPQWK 508
+ + P +R GHS ++ G+ ++ +FGG KS + E Y D L E WK
Sbjct: 64 PSLRGN-GPEAREGHSATLVGK-RLFIFGGCGKSTS---NNDEVYYNDLYILNTETFVWK 118
Query: 509 QLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKP 568
Q + P PR H S ++I+ GG A + S + +LD +
Sbjct: 119 Q---------ATTMGTPPSPRDSHTCSSWK-NKVIVIGGEDAHDYYLSDVHILD--TDTL 166
Query: 569 SWRILNVPGQ--PPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHEL 615
W LN GQ PP+ GH+T G + + V GG T + + N+LH L
Sbjct: 167 VWTELNTSGQLLPPRA--GHTTIAFGRS-LFVFGGFTDAQNLYNDLHML 212
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
E W++ T G R + + + N++++ GGE + + D +L+ D
Sbjct: 113 ETFVWKQATTMGTPPSPRDSHTCSSWKNKVIVIGGEDAHDYYLSDVHILDTDTLVWTELN 172
Query: 349 VSVKSSPPGRWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLDAKQPTWIEVSGGAPP 407
S + PP R GHT + G L VFGG Q L ND+ +LD++ T I G P
Sbjct: 173 TSGQLLPP-RAGHTTIAF-GRSLFVFGGFTDAQNLYNDLHMLDIENGVWTKITTMGDGPS 230
Query: 408 LPRSWHSSCI--IEGSKLVVSGGCTDAGVLLSDTYLL 442
S C+ + L + GGC L D Y L
Sbjct: 231 ARFSVAGDCLDPYKVGTLALLGGCNKGLEALGDMYYL 267
>gi|421618984|ref|ZP_16059950.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Pseudomonas stutzeri KOS6]
gi|409779076|gb|EKN58752.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Pseudomonas stutzeri KOS6]
Length = 1064
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 60/107 (56%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
V+ DA D PIIY N FE TGY EV+G+NCRFLQ P DP+ EI
Sbjct: 383 VIVDAQASDMPIIYANPAFERITGYPPTEVVGKNCRFLQ---------GPDRDPLRSEEI 433
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
RR L + + + NF++DG N L ++PI D+ G V+H +G+Q
Sbjct: 434 RRGLSQARDVHVVVRNFRRDGQAFWNDLYISPIFDERGVVSHFVGVQ 480
>gi|145245543|ref|XP_001395039.1| GATA transcription factor LreA [Aspergillus niger CBS 513.88]
gi|134079743|emb|CAK40880.1| unnamed protein product [Aspergillus niger]
Length = 871
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
+FV+ D D PI+YV++ FE TGY E++G+NCRFLQ D QR + VD
Sbjct: 312 AFVLCDITLEDHPIVYVSEAFERLTGYTNQEIVGQNCRFLQGPDGVVQRGMQRKFVDENT 371
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
+R +EE E Q ++N++K G P VN + + PIR +G Q +DL
Sbjct: 372 AYRLRSTIEERTEIQASIINYRKGGQPFVNLITMIPIRWGGSDYRFYVGFQ------VDL 425
Query: 174 NHVSYPVFKENCNQQY 189
V + N N Y
Sbjct: 426 VETPDAVTRRNPNGTY 441
>gi|429849751|gb|ELA25098.1| white collar 1, partial [Colletotrichum gloeosporioides Nara gc5]
Length = 956
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ + + A + VD
Sbjct: 397 AFVVCDVSLNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQSPNGKVEAGSKREFVDDAS 456
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI DD V +G QI
Sbjct: 457 VYNLKKKIAEGREVQQSLINYRKGGKPFLNLLTMIPIPWDDPNEVRFFVGFQI 509
>gi|340503476|gb|EGR30061.1| kelch motif family protein, putative [Ichthyophthirius multifiliis]
Length = 480
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 122/277 (44%), Gaps = 37/277 (13%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W K + G SR N SA AG+R+++FGG+G + D L D W +
Sbjct: 189 WNKPKISGTPPASRYNHSAILAGSRIIIFGGKGQKGKVFRDLHAL--DPVTATWYQGPEG 246
Query: 353 S-SPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
S SP R+ H+ + + GS +++FGG ND+++LDL+ W + S P
Sbjct: 247 SGSPSARFAHSANLVGGSKMLIFGGWNGNEFFNDLYLLDLEVM--AWTQPSSSGPAPSPR 304
Query: 412 WHSSCIIEGSKLVVSGG-CTD----------AGVLLSDTYLLD---LTTDKPMWREIPTS 457
+ I G+ L++ GG C D G L +L D L TD +W + S
Sbjct: 305 QGHTAIQVGNNLIIQGGFCFDDEKQKKCGFKQGTQLRSCFLNDLRILDTDNFIWSRLRVS 364
Query: 458 WSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLR------LRSGESYTIDLGDEEPQWKQL 510
+PP+ R GH+ ++ G ++ FGG + + R ++ Y + L E W++
Sbjct: 365 GTPPTPRYGHASNISG-PDIIFFGGWSYNSGARGEQNFIPQADIDYFLVLNTETMCWEK- 422
Query: 511 ECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG 547
G + P R H A S+ I+IFGG
Sbjct: 423 --------GRFEGIPPLNRYGHTASSIGP-HILIFGG 450
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 134/296 (45%), Gaps = 44/296 (14%)
Query: 329 QPMDDTFVLNLDAANPEWRRVS--VKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG----- 381
Q D + + + +W+ + ++ PP G ++L+G+ +V+FGG G
Sbjct: 114 QSQSDKYFYDQEYEPRKWQWATPLIEGVPPCPRGGHSATLSGATIVIFGGHYYAGKAKGY 173
Query: 382 -LLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTY 440
LND ++LD+++ + ++S G PP R HS+ I+ GS++++ GG G + D +
Sbjct: 174 VYLNDTYILDVNSNRWNKPKIS-GTPPASRYNHSA-ILAGSRIIIFGGKGQKGKVFRDLH 231
Query: 441 LLDLTTDKPMWREIPT-SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTID 499
LD T W + P S SP +R HS ++ G +K+L+FGG + + Y +D
Sbjct: 232 ALDPVT--ATWYQGPEGSGSPSARFAHSANLVGGSKMLIFGGWNGNEFFN----DLYLLD 285
Query: 500 LGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG--------SIAG 551
L E W Q S S P PR H A+ + +II GG G
Sbjct: 286 L--EVMAWTQP---------SSSGPAPSPRQGHTAIQV-GNNLIIQGGFCFDDEKQKKCG 333
Query: 552 LHSPSQL---FLLD---PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 601
+QL FL D + W L V G PP +GH++ + G ++ GG
Sbjct: 334 FKQGTQLRSCFLNDLRILDTDNFIWSRLRVSGTPPTPRYGHASN-ISGPDIIFFGG 388
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 140/339 (41%), Gaps = 51/339 (15%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQP-----MDDTFVLNLDAANPEWR 347
W + G R SA +G +V+FGG + ++DT++L++++ W
Sbjct: 133 WATPLIEGVPPCPRGGHSATLSGATIVIFGGHYYAGKAKGYVYLNDTYILDVNSN--RWN 190
Query: 348 RVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLDLDAKQPTWIE-VSGG 404
+ + +PP R+ H+ + L GS +++FGG G++G + D+ LD TW + G
Sbjct: 191 KPKISGTPPASRYNHS-AILAGSRIIIFGGKGQKGKVFRDLHA--LDPVTATWYQGPEGS 247
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWRE-IPTSWSPPSR 463
P R HS+ ++ GSK+++ GG + +D YLLDL W + + +P R
Sbjct: 248 GSPSARFAHSANLVGGSKMLIFGGW-NGNEFFNDLYLLDLEV--MAWTQPSSSGPAPSPR 304
Query: 464 LGHSLSVYGRTKVLMFG-----------GLAKSGHLRLRSGESYTIDLGDEEPQWKQLEC 512
GH+ G ++ G G + LR I L + W +L
Sbjct: 305 QGHTAIQVGNNLIIQGGFCFDDEKQKKCGFKQGTQLRSCFLNDLRI-LDTDNFIWSRLRV 363
Query: 513 NAFTGVGSQSAVVPPPRLDHVA-VSMPCGRIIIFGG--SIAGLHSPSQL-------FLLD 562
S P PR H + +S P II FGG +G + L
Sbjct: 364 ---------SGTPPTPRYGHASNISGP--DIIFFGGWSYNSGARGEQNFIPQADIDYFLV 412
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 601
+ E W G PP +GH+ + G +L+ GG
Sbjct: 413 LNTETMCWEKGRFEGIPPLNRYGHTASSI-GPHILIFGG 450
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 31/191 (16%)
Query: 437 SDTYLLDLTTDKPMWREIPTSWSPP--------SRLGHSLSVYGRTKVLMFGGLAKSGHL 488
SD Y D + W+ W+ P R GHS ++ G T +++FGG +G
Sbjct: 117 SDKYFYDQEYEPRKWQ-----WATPLIEGVPPCPRGGHSATLSGAT-IVIFGGHYYAGKA 170
Query: 489 R--LRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFG 546
+ + ++Y +D+ +W + + S P R +H A+ + RIIIFG
Sbjct: 171 KGYVYLNDTYILDVNSN--RWNKPKI---------SGTPPASRYNHSAI-LAGSRIIIFG 218
Query: 547 GSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEE 606
G L LDP +W P + HS +VGG+++L+ GG G E
Sbjct: 219 GKGQKGKVFRDLHALDPV--TATWYQGPEGSGSPSARFAHSANLVGGSKMLIFGGWNGNE 276
Query: 607 WVLNELHELCL 617
+ N+L+ L L
Sbjct: 277 F-FNDLYLLDL 286
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 37/187 (19%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGG--------------EGVNMQP 330
L LE + W + + G R +A GN L++ GG +G ++
Sbjct: 283 LLDLEVMAWTQPSSSGPAPSPRQGHTAIQVGNNLIIQGGFCFDDEKQKKCGFKQGTQLRS 342
Query: 331 --MDDTFVLNLDAANPEWRRVSVKSSPPG-RWGHTLSSLNGSWLVVFGG----CGRQGLL 383
++D +L+ D N W R+ V +PP R+GH S+++G ++ FGG G +G
Sbjct: 343 CFLNDLRILDTD--NFIWSRLRVSGTPPTPRYGHA-SNISGPDIIFFGGWSYNSGARGEQ 399
Query: 384 NDV------FVLDLDAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGG-----CTD 431
N + + L L+ + W + G PPL R H++ I G +++ GG T+
Sbjct: 400 NFIPQADIDYFLVLNTETMCWEKGRFEGIPPLNRYGHTASSI-GPHILIFGGWEFNRATN 458
Query: 432 AGVLLSD 438
V+L D
Sbjct: 459 EVVVLRD 465
>gi|409101099|ref|ZP_11221123.1| PAS/PAC sensor signal transduction histidine kinase [Pedobacter
agri PB92]
Length = 517
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 25 KCSFEGGGGGGGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRA 84
K +F G D + L L ++ + ++ D D PIIY NK FE +GY
Sbjct: 3 KENFSDLPVSGNDPANIKLLKAAL--DSSISGIIITDNTQFDNPIIYCNKAFEKLSGYTR 60
Query: 85 DEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNR 144
D+V+GRNCRFLQ + Q R +IR+ + EG EL N++K+G N
Sbjct: 61 DKVIGRNCRFLQGTERDQQAR---------EDIRKAVNEGHSITVELRNYRKNGELFWNE 111
Query: 145 LRLAPIRDDDGTVTHIIGIQ 164
L ++PI DG V+H IG+Q
Sbjct: 112 LFISPISIHDGKVSHFIGVQ 131
>gi|332186175|ref|ZP_08387921.1| sensory box protein [Sphingomonas sp. S17]
gi|332013990|gb|EGI56049.1| sensory box protein [Sphingomonas sp. S17]
Length = 524
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PI++ N+ F TGY DE+LG NCRFLQ P D
Sbjct: 26 TTRMPMIVTDPRQPDNPIVFCNEAFSFMTGYSEDEILGTNCRFLQ---------GPETDR 76
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV++IR +E E ELLN++K+G+ N L ++P+ DD G + + Q+
Sbjct: 77 DVVAQIRAAVERRDEIAVELLNYRKNGSTFWNALFVSPVYDDAGELVYFFSSQL 130
>gi|297839293|ref|XP_002887528.1| hypothetical protein ARALYDRAFT_316360 [Arabidopsis lyrata subsp.
lyrata]
gi|297333369|gb|EFH63787.1| hypothetical protein ARALYDRAFT_316360 [Arabidopsis lyrata subsp.
lyrata]
Length = 567
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 123/283 (43%), Gaps = 28/283 (9%)
Query: 346 WRRV------SVKSSPPGRWGHTLSSLNGS-WLVVFGGCGRQG-LLNDVFVLDLDAKQPT 397
W RV S P RWGHT +++ G +L VFGG GR L N V V D +
Sbjct: 3 WERVRQVGLGDSSSGPGNRWGHTCNAIKGGRFLYVFGGFGRDNCLTNQVHVFDTQTQ--L 60
Query: 398 WIE-VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPT 456
W V G PP PR H SC G L V GG TD L+D ++LD ++ + +I
Sbjct: 61 WTRPVINGVPPCPRDSH-SCTTVGDNLFVFGG-TDGTNYLNDVHILDTSSHTWICPDI-R 117
Query: 457 SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFT 516
P +R HS ++ + ++ +FGG KS + L E WK+
Sbjct: 118 GEGPGAREAHSAALVDK-RLFIFGGCGKSSDSDDEVFYNDLYILNTETFMWKR------- 169
Query: 517 GVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVP 576
+ ++ PP D S +II+ GG + S + +LD +K W+ L
Sbjct: 170 ---AVTSGKPPSARDSHTCSAWKNKIIVVGGEDLDDYYLSDVHILD--TDKFVWKELRTS 224
Query: 577 GQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
GQ GH T + + V GG T + + ++L+ L L +
Sbjct: 225 GQLLTPRAGHVTVAL-ERNLFVFGGFTDSQNLYDDLYVLDLET 266
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 122/284 (42%), Gaps = 42/284 (14%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGG-EGVNMQPMDDTFVLNLDAANPEWRRVSV 351
W + + G R + S G+ L +FGG +G N ++D +L D ++ W +
Sbjct: 61 WTRPVINGVPPCPRDSHSCTTVGDNLFVFGGTDGTNY--LNDVHIL--DTSSHTWICPDI 116
Query: 352 KSSPPGRWGHTLSSLNGSWLVVFGGCGRQG------LLNDVFVLDLDAKQPTWIE-VSGG 404
+ PG ++L L +FGGCG+ ND+++L+ + W V+ G
Sbjct: 117 RGEGPGAREAHSAALVDKRLFIFGGCGKSSDSDDEVFYNDLYILNTETFM--WKRAVTSG 174
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-R 463
PP R H +C +K++V GG LSD ++LD TDK +W+E+ TS + R
Sbjct: 175 KPPSARDSH-TCSAWKNKIIVVGGEDLDDYYLSDVHILD--TDKFVWKELRTSGQLLTPR 231
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSA 523
GH ++V + +FGG S +L + Y +DL TGV S+
Sbjct: 232 AGH-VTVALERNLFVFGGFTDSQNLY---DDLYVLDLE--------------TGVWSKVV 273
Query: 524 VV---PPPRLDHVAVSM---PCGRIIIFGGSIAGLHSPSQLFLL 561
+ P PR AV + G GG L ++ L
Sbjct: 274 AMEEGPSPRFSSAAVCLHPYKAGSFFFVGGCNKNLEPLDDIYYL 317
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 7/162 (4%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
+ E W++ G +R + + A N++++ GGE ++ + D +L+ D
Sbjct: 159 ILNTETFMWKRAVTSGKPPSARDSHTCSAWKNKIIVVGGEDLDDYYLSDVHILDTDKFVW 218
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
+ R S + P R GH +L + V G Q L +D++VLDL+ W +V
Sbjct: 219 KELRTSGQLLTP-RAGHVTVALERNLFVFGGFTDSQNLYDDLYVLDLETG--VWSKVVAM 275
Query: 405 AP-PLPR-SWHSSCI--IEGSKLVVSGGCTDAGVLLSDTYLL 442
P PR S + C+ + GGC L D Y L
Sbjct: 276 EEGPSPRFSSAAVCLHPYKAGSFFFVGGCNKNLEPLDDIYYL 317
>gi|358369056|dbj|GAA85671.1| GATA transcription factor LreA [Aspergillus kawachii IFO 4308]
Length = 881
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
+FV+ D D PI+YV++ FE TGY E++G+NCRFLQ D QR + VD
Sbjct: 323 AFVLCDITLEDHPIVYVSEAFERLTGYTNQEIVGQNCRFLQGPDGVVQRGMQRKFVDENT 382
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
+R +EE E Q ++N++K G P VN + + PIR +G Q +DL
Sbjct: 383 AYRLRSTIEERTEIQASIINYRKGGQPFVNLITMLPIRWGGSDYRFYVGFQ------VDL 436
Query: 174 NHVSYPVFKENCNQQY 189
V + N N Y
Sbjct: 437 VETPDAVTRRNPNGTY 452
>gi|356507056|ref|XP_003522287.1| PREDICTED: uncharacterized protein LOC100785267 [Glycine max]
Length = 997
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 128/270 (47%), Gaps = 26/270 (9%)
Query: 355 PPGRWGHTLSSL-NGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPTWIEVS-GGAPPLPRS 411
P RWGHT +++ +G +L +FGG G+ N V V D KQ +W E + G PP PR
Sbjct: 15 PGKRWGHTCNAVRDGRFLYLFGGYGKFNCQTNQVHVFDT-LKQ-SWSEPAIKGPPPTPRD 72
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
H SC + G L V GG TD LL+D ++LD ++ ++ + +P +R GH ++
Sbjct: 73 SH-SCTVIGDSLFVFGG-TDGSKLLNDLHILDTSSHTWVFPTV-RGEAPDAREGHDAALV 129
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLD 531
G+ ++ MFGG +S E Y DL L F + ++ PP D
Sbjct: 130 GK-RLFMFGGCGRSAD---NINEVYYNDL-------YILNTELFVWNRATTSGTPPSPRD 178
Query: 532 HVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ--PPKFAWGHSTC 589
S +II+ GG S + +LD + W L GQ PP+ GHST
Sbjct: 179 GHTCSSWRNKIIVIGGEDENDSYLSDVHILD--TDTLIWSKLCTSGQLLPPRA--GHST- 233
Query: 590 VVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
V G + V GG T + + N+L+ L + +
Sbjct: 234 VSFGKNLFVFGGFTDAQSLYNDLYMLNIET 263
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 280 RLARELTTLEAV--CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVL 337
+L +L L+ W TVRG +R A G RL +FGG G + +++ +
Sbjct: 93 KLLNDLHILDTSSHTWVFPTVRGEAPDAREGHDAALVGKRLFMFGGCGRSADNINEVYYN 152
Query: 338 NLDAANPE---WRRVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDA 393
+L N E W R + +PP R GHT SS +V+ G L+DV +LD D
Sbjct: 153 DLYILNTELFVWNRATTSGTPPSPRDGHTCSSWRNKIIVIGGEDENDSYLSDVHILDTDT 212
Query: 394 KQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWRE 453
+ + SG P PR+ HS+ G L V GG TDA L +D Y+L++ T +W +
Sbjct: 213 LIWSKLCTSGQLLP-PRAGHSTVSF-GKNLFVFGGFTDAQSLYNDLYMLNIET--CVWTK 268
Query: 454 IPTSWSPPSR----LGHSLSVYGRTKVLMFGGLAKS 485
+ + + PS G L Y ++ GG ++
Sbjct: 269 VAITPNGPSARFSVAGDCLDPYMSGVLVFVGGCNRN 304
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLN----LDAANPEWRR 348
W + ++G R + S G+ L +FGG D + +LN LD ++ W
Sbjct: 58 WSEPAIKGPPPTPRDSHSCTVIGDSLFVFGG-------TDGSKLLNDLHILDTSSHTWVF 110
Query: 349 VSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLD---LDAKQPTWIE-VS 402
+V+ +P R GH ++L G L +FGGCGR +N+V+ D L+ + W +
Sbjct: 111 PTVRGEAPDAREGHD-AALVGKRLFMFGGCGRSADNINEVYYNDLYILNTELFVWNRATT 169
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-PP 461
G PP PR H +C +K++V GG + LSD ++LD TD +W ++ TS P
Sbjct: 170 SGTPPSPRDGH-TCSSWRNKIIVIGGEDENDSYLSDVHILD--TDTLIWSKLCTSGQLLP 226
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHL 488
R GHS +G+ + +FGG + L
Sbjct: 227 PRAGHSTVSFGKN-LFVFGGFTDAQSL 252
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 143/331 (43%), Gaps = 41/331 (12%)
Query: 307 CNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPG-RWGHTLSS 365
CN A G L LFGG G + V D W ++K PP R H+ +
Sbjct: 23 CN--AVRDGRFLYLFGGYGKFNCQTNQVHVF--DTLKQSWSEPAIKGPPPTPRDSHSCTV 78
Query: 366 LNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVV 425
+ G L VFGG LLND+ +LD + + V G AP R H + ++ G +L +
Sbjct: 79 I-GDSLFVFGGTDGSKLLNDLHILDTSSHTWVFPTVRGEAPDA-REGHDAALV-GKRLFM 135
Query: 426 SGGCTDAGVLLSDTYLLD---LTTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVLMFGG 481
GGC + +++ Y D L T+ +W TS +PPS R GH+ S + R K+++ GG
Sbjct: 136 FGGCGRSADNINEVYYNDLYILNTELFVWNRATTSGTPPSPRDGHTCSSW-RNKIIVIGG 194
Query: 482 LAKSGHLRLRSGESYTID---LGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMP 538
++ +SY D L + W +L C S + PPR H VS
Sbjct: 195 EDEN--------DSYLSDVHILDTDTLIWSKL-CT--------SGQLLPPRAGHSTVSF- 236
Query: 539 CGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSW-RILNVPGQPPKFAWGHSTCV---VGGT 594
+ +FGG + L++L+ E W ++ P P C+ + G
Sbjct: 237 GKNLFVFGGFTDAQSLYNDLYMLN--IETCVWTKVAITPNGPSARFSVAGDCLDPYMSGV 294
Query: 595 RVLVLGGHTGEEWVLNELHELCLASKQDSDQ 625
V V G + E L+++H L ++S+Q
Sbjct: 295 LVFVGGCNRNLE-ALDDMHYLYTGIARESEQ 324
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 7/162 (4%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
+ E W + T G R + + N++++ GGE N + D +L+ D
Sbjct: 156 ILNTELFVWNRATTSGTPPSPRDGHTCSSWRNKIIVIGGEDENDSYLSDVHILDTDTL-- 213
Query: 345 EWRRVSVKSS-PPGRWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLDAKQPTWIEVS 402
W ++ P R GH+ S G L VFGG Q L ND+++L+++ T + ++
Sbjct: 214 IWSKLCTSGQLLPPRAGHSTVSF-GKNLFVFGGFTDAQSLYNDLYMLNIETCVWTKVAIT 272
Query: 403 GGAPPLPRSWHSSCI--IEGSKLVVSGGCTDAGVLLSDTYLL 442
P S C+ LV GGC L D + L
Sbjct: 273 PNGPSARFSVAGDCLDPYMSGVLVFVGGCNRNLEALDDMHYL 314
>gi|358459156|ref|ZP_09169358.1| putative PAS/PAC sensor protein [Frankia sp. CN3]
gi|357077644|gb|EHI87101.1| putative PAS/PAC sensor protein [Frankia sp. CN3]
Length = 603
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+T SF +AD + PD P+ +VN F TGY E +GRNCRFLQ P DP
Sbjct: 26 STDVSFTLADPYQPDTPLTWVNDAFTRITGYSFAEAVGRNCRFLQ---------GPRSDP 76
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ + E + E+LN++KDG+ + + LAP+ D DG +TH +G+Q
Sbjct: 77 AAAARLGAAQRERRPTRVEILNYRKDGSTFWSEIALAPVLDRDGRLTHFVGVQ 129
>gi|159475244|ref|XP_001695733.1| flagellar outer dynein arm heavy chain alpha [Chlamydomonas
reinhardtii]
gi|158275744|gb|EDP01520.1| flagellar outer dynein arm heavy chain alpha [Chlamydomonas
reinhardtii]
Length = 4500
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 288 LEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVN---MQPMDDTFVLNLDAANP 344
++++ W +G R S G R VLFGG G +D + LD ++P
Sbjct: 1 MQSIFWEVPNAQGEAPCPRSGHSFTVLGERFVLFGGCGRKDGKAAAFNDLY--ELDTSDP 58
Query: 345 E---WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV 401
+ W+ + V ++PP R H +L+ L+VFGG ++ NDV++ + D K T +EV
Sbjct: 59 DEYKWKELVVANAPPPRARHAAIALDDKRLLVFGGLNKRIRYNDVWLFNYDDKSWTCMEV 118
Query: 402 SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-- 459
G AP PR+ H + GS++ + GG +G + ++ ++L D W+ I S
Sbjct: 119 EGAAPE-PRA-HFTATRFGSRVFIFGGYGGSGQVYNEMWVLHFGEDGFRWQNITESIEGT 176
Query: 460 -PPSRLGHSLSVYGRT-------KVLMFGG 481
P R HS +Y T K+L+ GG
Sbjct: 177 GPAPRFDHSAFIYPVTPNSDTYDKLLIMGG 206
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 453 EIPTSW--SPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD-EEPQWKQ 509
E+P + +P R GHS +V G + ++FGG + + Y +D D +E +WK+
Sbjct: 7 EVPNAQGEAPCPRSGHSFTVLGE-RFVLFGGCGRKDGKAAAFNDLYELDTSDPDEYKWKE 65
Query: 510 LECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGL-HSPSQLFLLDPSEEKP 568
L A PPPR H A+++ R+++FGG + ++ LF D
Sbjct: 66 LVV----------ANAPPPRARHAAIALDDKRLLVFGGLNKRIRYNDVWLFNYDDK---- 111
Query: 569 SWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEL 612
SW + V G P+ H T G+RV + GG+ G V NE+
Sbjct: 112 SWTCMEVEGAAPE-PRAHFTATRFGSRVFIFGGYGGSGQVYNEM 154
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 30/212 (14%)
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGC---TDAGVLLSDTYLLDLTT-DKPMWREIPTSWS 459
G P PRS HS ++ G + V+ GGC +D Y LD + D+ W+E+ + +
Sbjct: 13 GEAPCPRSGHSFTVL-GERFVLFGGCGRKDGKAAAFNDLYELDTSDPDEYKWKELVVANA 71
Query: 460 PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVG 519
PP R H+ ++L+FGGL K R+R + + + D+ W +E
Sbjct: 72 PPPRARHAAIALDDKRLLVFGGLNK----RIRYNDVWLFNYDDK--SWTCMEV------- 118
Query: 520 SQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRIL--NVPG 577
P PR H + R+ IFGG +++++L E+ W+ + ++ G
Sbjct: 119 --EGAAPEPRA-HFTATRFGSRVFIFGGYGGSGQVYNEMWVLHFGEDGFRWQNITESIEG 175
Query: 578 QPPKFAWGHSTCVVGGT-------RVLVLGGH 602
P + HS + T ++L++GG
Sbjct: 176 TGPAPRFDHSAFIYPVTPNSDTYDKLLIMGGR 207
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W K V GA R + C GN LVL+GG+ + VLN + A W +V
Sbjct: 539 WTKHRVMGAAPAKRKGATICTMGNELVLYGGDKSGVT------VLNTEGAEWRWSPATVS 592
Query: 353 -SSPPGRWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVL 389
S+PP R H+ L+ LVVFGG Q LND++ L
Sbjct: 593 GSTPPDRTAHSTVVLSDGELVVFGGINLADQNDLNDIYYL 632
>gi|448344651|ref|ZP_21533556.1| bacterio-opsin activator [Natrinema altunense JCM 12890]
gi|445637558|gb|ELY90707.1| bacterio-opsin activator [Natrinema altunense JCM 12890]
Length = 629
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++YVN+ +E TGY DEV+GRNCRFLQ D D
Sbjct: 140 PVGITISDPDREDNPLVYVNEAYEEMTGYEFDEVVGRNCRFLQGEDS---------DEAA 190
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+ ++E EL N++KDGT N + +AP+RD+DG VT+ +G Q
Sbjct: 191 IAEMAAAIDEDRPVTVELKNYRKDGTEFWNEVTIAPVRDEDGRVTNYVGFQ 241
>gi|448299045|ref|ZP_21489058.1| bacterio-opsin activator [Natronorubrum tibetense GA33]
gi|445588579|gb|ELY42821.1| bacterio-opsin activator [Natronorubrum tibetense GA33]
Length = 646
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 20/155 (12%)
Query: 17 IQGSGKRQKCSFEGGGGGGGDDTELSLKPGLLFYPT-------TPTSFVVADAFDPDFPI 69
I S +R +FE G D + P Y P ++D D P+
Sbjct: 109 IHRSTERATITFESATG----DVDEPASPAESDYAVKDRAINEAPVGITISDPDLEDNPL 164
Query: 70 IYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQG 129
+YVN +E TGY D+V+GRNCRFLQ D V+E+ ++E
Sbjct: 165 VYVNDAYEEMTGYDYDDVIGRNCRFLQGEDSSEA---------AVAEMAAAIDEDYPVTV 215
Query: 130 ELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
E+ N++KDGT N + +AP+RD+ GTVTH IG Q
Sbjct: 216 EIKNYRKDGTEFWNEVTIAPVRDEAGTVTHYIGFQ 250
>gi|379735862|ref|YP_005329368.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(S) [Blastococcus saxobsidens DD2]
gi|378783669|emb|CCG03337.1| Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(S) [Blastococcus saxobsidens DD2]
Length = 762
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T + +AD PD P++YVN+ FE G VLGRNCRFLQ P DP
Sbjct: 453 ATTSGVTIADMRLPDQPLVYVNEAFEQLAGLPRAAVLGRNCRFLQ---------SPDTDP 503
Query: 112 VVVSEIRRCLEEGIEFQGELLNFK-KDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAK 170
V+ IR ++ G E + +LN + D P N + LAP+ D DGT+ H IG+Q A+
Sbjct: 504 AAVTRIRAAIDRGEECRETVLNVRGPDRQPWWNEVHLAPVFDTDGTLAHYIGVQHDVTAR 563
Query: 171 ID 172
I+
Sbjct: 564 IE 565
>gi|152968266|ref|YP_001364050.1| PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase [Kineococcus radiotolerans
SRS30216]
gi|151362783|gb|ABS05786.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Kineococcus radiotolerans SRS30216]
Length = 743
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 19/163 (11%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ + +AD PD P++YVN+ FE GYR++E+LGRNCRFLQ D D
Sbjct: 450 ASTSGITIADMRRPDQPLVYVNRAFEELAGYRSEELLGRNCRFLQGAD---------TDH 500
Query: 112 VVVSEIRRCLEEGIEFQGELLNFK-KDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAK 170
+ +R + EG E + LLN++ D + N + +AP+ D+DG + IG+Q
Sbjct: 501 DAIGRLRSAIAEGREVRETLLNYRGPDRSEWWNEIYMAPVTDEDGRLVQYIGVQ------ 554
Query: 171 IDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGIL 213
N V+ V E + AQ + L+ + G++
Sbjct: 555 ---NDVTAQVEAERALIRERDRAQSYLARIEELAYTDSLTGLV 594
>gi|433422511|ref|ZP_20406014.1| PAS-PAC-PAC sensing histidine kinase [Haloferax sp. BAB2207]
gi|432198601|gb|ELK54866.1| PAS-PAC-PAC sensing histidine kinase [Haloferax sp. BAB2207]
Length = 709
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 10/101 (9%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D D P+ YVN FE TGY + EV+GRNCRFLQ D DP V + ++
Sbjct: 14 DDDQPLTYVNDAFEEMTGYDSSEVIGRNCRFLQGDD---------TDPEAVETLHEAVDA 64
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G L N++KDGTP N L+++P+ DDG +TH +G Q
Sbjct: 65 GESAAVGLTNYRKDGTPFWNDLKISPVY-DDGELTHFVGFQ 104
>gi|68072733|ref|XP_678280.1| protein serine/threonine phosphatase [Plasmodium berghei strain
ANKA]
gi|56498694|emb|CAH95465.1| protein serine/threonine phosphatase, putative [Plasmodium berghei]
Length = 880
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 126/261 (48%), Gaps = 30/261 (11%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGC----GRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
P R+GHT + L + + +FGG G+ + +D+++ DL Q W ++ P R
Sbjct: 22 PVPRFGHTATYLGNNKVAIFGGAIGDAGKYNITDDIYLYDL--TQNKWKKLITENTPTAR 79
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVL-LSDTYLLDLTTD-KPMWREIPTS-WSPPSRLGHS 467
+ H++ ++ +LV+ GG T G L L D Y+LDL + K W +PT SP R GH
Sbjct: 80 AAHAAACVDEQQLVIYGGATGGGSLSLDDLYILDLRREQKYSWMTVPTKGVSPGRRYGHV 139
Query: 468 LSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPP 527
+ VY + +++FGG G L +++ E W Q+ + S ++ VP
Sbjct: 140 M-VYSKPNLIVFGG--NDGQHALNDVWFMHVEMPPFE--WIQV-------IISNNSKVPS 187
Query: 528 PRLDHVAVSM----PCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVP---GQPP 580
PR+ H A G I+IFGG + S + + L + W + P G PP
Sbjct: 188 PRVYHSADMCKEGPATGMIVIFGGRNSENKSLNDTWGLRQHRDG-RWDWVEAPIKKGSPP 246
Query: 581 KFAWGHSTCVVGGTRVLVLGG 601
+ + H TCV G+++ VLGG
Sbjct: 247 EARYQH-TCVFIGSKLFVLGG 266
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 19/211 (9%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
+L + W +G R + L++FGG ++D + ++++
Sbjct: 113 DLRREQKYSWMTVPTKGVSPGRRYGHVMVYSKPNLIVFGGND-GQHALNDVWFMHVEMPP 171
Query: 344 PEWRRVSVKSS---PPGRWGHTLSSLN----GSWLVVFGGCGRQGL-LNDVFVLDLDAK- 394
EW +V + ++ P R H+ +V+FGG + LND + L
Sbjct: 172 FEWIQVIISNNSKVPSPRVYHSADMCKEGPATGMIVIFGGRNSENKSLNDTWGLRQHRDG 231
Query: 395 QPTWIE--VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWR 452
+ W+E + G+PP R H+ C+ GSKL V GG D G + + L T+ W
Sbjct: 232 RWDWVEAPIKKGSPPEARYQHT-CVFIGSKLFVLGGRNDNGCSIPLSTAL-YNTETIEWV 289
Query: 453 EIPTSWSPPSRLGHSLSVYGRTKVLMFGGLA 483
P P S+ H+ +Y T + FGG +
Sbjct: 290 TFP----PISKFRHTSWMYKYT-IYTFGGFS 315
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGN-RLVLFGG---EGVNMQPMDDTFVLNLDAANPEW 346
VC RK +G + R +A GN ++ +FGG + DD ++ +L +W
Sbjct: 11 VC-RKEKQKGDIPVPRFGHTATYLGNNKVAIFGGAIGDAGKYNITDDIYLYDL--TQNKW 67
Query: 347 RRVSVKSSPPGRWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQP-TWIEV-S 402
+++ +++P R H + ++ LV++GG G L+D+++LDL +Q +W+ V +
Sbjct: 68 KKLITENTPTARAAHAAACVDEQQLVIYGGATGGGSLSLDDLYILDLRREQKYSWMTVPT 127
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS--- 459
G P R H + L+V GG D L+D + + + W ++ S +
Sbjct: 128 KGVSPGRRYGH-VMVYSKPNLIVFGG-NDGQHALNDVWFMHVEMPPFEWIQVIISNNSKV 185
Query: 460 PPSRLGHSLSVY----GRTKVLMFGG 481
P R+ HS + +++FGG
Sbjct: 186 PSPRVYHSADMCKEGPATGMIVIFGG 211
>gi|85373423|ref|YP_457485.1| hypothetical protein ELI_02980 [Erythrobacter litoralis HTCC2594]
gi|123409698|sp|Q2NCA3.1|LVHK1_ERYLH RecName: Full=Blue-light-activated histidine kinase 1; AltName:
Full=EL360-LOV-histidine kinase; Short=EL360-LOV-HK
gi|84786506|gb|ABC62688.1| sensory box histidine kinase [Erythrobacter litoralis HTCC2594]
Length = 360
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 12/131 (9%)
Query: 37 DDTELSLKPGLLFYPTTPTS---FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCR 93
D +L + P LF TT + ++D PD P++YVN+ F TGY +E++GRNCR
Sbjct: 27 DPRDLRVDPTRLFLETTQQTRLAICISDPHQPDCPVVYVNQAFLDLTGYAREEIVGRNCR 86
Query: 94 FLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDD 153
FLQ D DP V ++R + +LLN++KDG P N + + PI +
Sbjct: 87 FLQGAD---------TDPEQVRKLREGIAAERYTVVDLLNYRKDGIPFWNAVHVGPIYGE 137
Query: 154 DGTVTHIIGIQ 164
DGT+ + G Q
Sbjct: 138 DGTLQYFYGSQ 148
>gi|119490653|ref|ZP_01623058.1| regulatory components of sensory transduction system [Lyngbya sp.
PCC 8106]
gi|119453818|gb|EAW34975.1| regulatory components of sensory transduction system [Lyngbya sp.
PCC 8106]
Length = 477
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 11/127 (8%)
Query: 38 DTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQY 97
+ +L+L +F T ++ DA D PIIYVN+ FE TGY EV G+NCRFLQ
Sbjct: 155 EIQLNLFNQAIF--TCRNGVIITDATQSDNPIIYVNQAFEKITGYSVSEVWGKNCRFLQG 212
Query: 98 RDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
D R P +D IR L+ + + N++KDGT N + ++P+RD G +
Sbjct: 213 ED----RDQPNLDI-----IRNALKNDEDCLVIIRNYRKDGTLFWNEVSISPVRDAGGNI 263
Query: 158 THIIGIQ 164
TH IGIQ
Sbjct: 264 THYIGIQ 270
>gi|300311768|ref|YP_003775860.1| PAS/PAC sensor hybrid histidine kinase [Herbaspirillum seropedicae
SmR1]
gi|300074553|gb|ADJ63952.1| PAS/PAC sensor hybrid histidine kinase protein [Herbaspirillum
seropedicae SmR1]
Length = 552
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T +V+D PD PI++VN F TGY + EV+G+NCRFLQ P D
Sbjct: 52 TRMPMIVSDPNRPDNPIVFVNNAFINMTGYSSAEVVGKNCRFLQ---------GPETDRS 102
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV+E+RR + E E ELLN++K+G+ N L ++P+ D G + + Q+
Sbjct: 103 VVAEVRRAVAERREIATELLNYRKNGSTFWNALFISPVYDQQGNLKYFFSSQL 155
>gi|189091908|ref|XP_001929787.1| hypothetical protein [Podospora anserina S mat+]
gi|27803064|emb|CAD60767.1| unnamed protein product [Podospora anserina]
gi|188219307|emb|CAP49287.1| unnamed protein product [Podospora anserina S mat+]
Length = 1042
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--AQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ + A + V+
Sbjct: 335 AFVVCDVELQDCPIIYVSDNFQNLTGYVRHEIVGQNCRFLQSPTGKVEAGTKREFVENHA 394
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI DD T+ + IG QI
Sbjct: 395 VFKLKNAIAEGREIQQSLINYRKGGKPFLNLLTMIPIPWDDPNTIRYFIGFQI 447
>gi|303275956|ref|XP_003057272.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461624|gb|EEH58917.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 110
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 59 VADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIR 118
+AD PD P+IY N FE+ TGY +E +G NCRFLQ P +P + IR
Sbjct: 10 IADFSLPDQPLIYANHGFELITGYSIEETIGHNCRFLQ---------GPDTEPEKLKIIR 60
Query: 119 RCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ + G EL N++K+G VN L L PIR +G VTH +GIQ
Sbjct: 61 KSINAGQPCVVELQNYRKNGERFVNSLSLTPIRTAEGKVTHYVGIQ 106
>gi|448342979|ref|ZP_21531921.1| bacterio-opsin activator [Natrinema gari JCM 14663]
gi|445624039|gb|ELY77428.1| bacterio-opsin activator [Natrinema gari JCM 14663]
Length = 630
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++YVN+ +E TGY DEV+GRNCRFLQ D D
Sbjct: 140 PVGITISDPDREDNPLVYVNEAYEEMTGYEFDEVVGRNCRFLQGEDS---------DEAA 190
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+ ++E EL N++KDGT N + +AP+RD+DG VT+ +G Q
Sbjct: 191 IAEMAAAIDEDRPVTVELKNYRKDGTEFWNEVTIAPVRDEDGRVTNYVGFQ 241
>gi|397775745|ref|YP_006543291.1| PAS sensor protein [Natrinema sp. J7-2]
gi|397684838|gb|AFO59215.1| PAS sensor protein [Natrinema sp. J7-2]
Length = 630
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++YVN+ +E TGY DEV+GRNCRFLQ D D
Sbjct: 140 PVGITISDPDREDNPLVYVNEAYEEMTGYEFDEVVGRNCRFLQGEDS---------DEAA 190
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+ ++E EL N++KDGT N + +AP+RD+DG VT+ +G Q
Sbjct: 191 IAEMAAAIDEDRPVTVELKNYRKDGTEFWNEVTIAPVRDEDGRVTNYVGFQ 241
>gi|448597109|ref|ZP_21654247.1| PAS-PAC-PAC sensing histidine kinase [Haloferax alexandrinus JCM
10717]
gi|445740990|gb|ELZ92495.1| PAS-PAC-PAC sensing histidine kinase [Haloferax alexandrinus JCM
10717]
Length = 858
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 10/101 (9%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D D P+ YVN FE TGY + EV+GRNCRFLQ D DP V + ++
Sbjct: 163 DDDQPLTYVNDAFEEMTGYDSSEVIGRNCRFLQGDD---------TDPEAVETLHEAVDA 213
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G L N++KDGTP N L+++P+ DDG +TH +G Q
Sbjct: 214 GESAAVGLTNYRKDGTPFWNDLKISPVY-DDGELTHFVGFQ 253
>gi|449517790|ref|XP_004165927.1| PREDICTED: LOW QUALITY PROTEIN: rab9 effector protein with kelch
motifs-like, partial [Cucumis sativus]
Length = 606
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 147/342 (42%), Gaps = 37/342 (10%)
Query: 286 TTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE 345
T+ + W V G R SAC + +FGG + D VLNLD
Sbjct: 4 TSKKKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFGGCCGGLH-FSDVLVLNLDTM--V 60
Query: 346 WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS-GG 404
W + PG + + G+ ++VFGG +ND+ +LDL K+ W++ G
Sbjct: 61 WTNMVTTGQGPGPRDSHGALIVGNQMIVFGGTNGSKKVNDLHILDLGTKE--WVQPECKG 118
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREIPTSWS-PPS 462
PP PR H++ ++ KLV+ GG + L+D ++LDL + +W I P
Sbjct: 119 NPPSPRESHTATLVGDDKLVIFGGSGEGESNYLNDLHILDLKS--MVWMNIEVRGDIPVP 176
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYT--IDLGD-EEPQWKQLECNAFTGVG 519
R HS + G K+ ++GG G+ Y +D+ D W +L +
Sbjct: 177 RDSHSATAVGH-KLFVYGG---------DCGDRYQGGVDMLDVHSLTWSKLSVQGSS--- 223
Query: 520 SQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQP 579
P R H AV++ ++ I GG + + ++LD SW L+ GQ
Sbjct: 224 ------PGVRAGHAAVNIAT-KVYILGG-VGDRQYYNDAWVLDLC--TCSWTQLDTCGQQ 273
Query: 580 PKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
P+ + H T VV + + + GG +E LN+L L L ++
Sbjct: 274 PQGRFSH-TAVVADSDIAIYGGCGEDERPLNDLLVLQLGAEH 314
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 288 LEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGE-------GVNMQPMDDTFVLNLD 340
L+++ W VRG + R + SA A G++L ++GG+ GV+M LD
Sbjct: 159 LKSMVWMNIEVRGDIPVPRDSHSATAVGHKLFVYGGDCGDRYQGGVDM----------LD 208
Query: 341 AANPEWRRVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWI 399
+ W ++SV+ S PG R GH ++ + + + GG G + ND +VLDL T +
Sbjct: 209 VHSLTWSKLSVQGSSPGVRAGHAAVNI-ATKVYILGGVGDRQYYNDAWVLDLCTCSWTQL 267
Query: 400 EVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWR 452
+ G P + + ++ S + + GGC + L+D +L L + P R
Sbjct: 268 DTCGQQPQ--GRFSHTAVVADSDIAIYGGCGEDERPLNDLLVLQLGAEHPNGR 318
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ + ++ W K +V+G+ R +A ++ + GG G + Q +D +VL+L +
Sbjct: 205 DMLDVHSLTWSKLSVQGSSPGVRAGHAAVNIATKVYILGGVG-DRQYYNDAWVLDLCTCS 263
Query: 344 PEWRRV-SVKSSPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ + P GR+ HT + + S + ++GGCG + LND+ VL L A+ P
Sbjct: 264 --WTQLDTCGQQPQGRFSHT-AVVADSDIAIYGGCGEDERPLNDLLVLQLGAEHPN 316
>gi|448572980|ref|ZP_21640658.1| PAS-PAC-PAC sensing histidine kinase [Haloferax lucentense DSM
14919]
gi|445719345|gb|ELZ71026.1| PAS-PAC-PAC sensing histidine kinase [Haloferax lucentense DSM
14919]
Length = 858
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 10/101 (9%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D D P+ YVN FE TGY + EV+GRNCRFLQ D DP V + ++
Sbjct: 163 DDDQPLTYVNDAFEEMTGYDSSEVIGRNCRFLQGDD---------TDPEAVETLHEAVDA 213
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G L N++KDGTP N L+++P+ DDG +TH +G Q
Sbjct: 214 GESAAVGLTNYRKDGTPFWNDLKISPVY-DDGELTHFVGFQ 253
>gi|389693838|ref|ZP_10181932.1| PAS domain S-box [Microvirga sp. WSM3557]
gi|388587224|gb|EIM27517.1| PAS domain S-box [Microvirga sp. WSM3557]
Length = 586
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 19 GSGKRQKCSFEGGGGGGG---DDTELSLKPGL-----LFYPT---TPTSFVVADAFDPDF 67
+G+ + S+ GG G + +S +PGL +F+ T ++ D PD
Sbjct: 30 AAGEHEHASYNPTGGPGVHHWQEARIS-EPGLDDRSNVFFAAIEMTRMPMILTDPNLPDN 88
Query: 68 PIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEF 127
PI + N+ F+ TGY +EVLGRNCRFLQ L D V+E+R + E
Sbjct: 89 PIAFANRAFQDLTGYTEEEVLGRNCRFLQ---------GALTDKEAVAELRNAVREQRAI 139
Query: 128 QGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
ELLN+K+DGTP N + P+ D DG + + Q+
Sbjct: 140 SVELLNYKRDGTPFWNACFIGPVFDKDGKLLYFFASQL 177
>gi|170749966|ref|YP_001756226.1| histidine kinase [Methylobacterium radiotolerans JCM 2831]
gi|170656488|gb|ACB25543.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium
radiotolerans JCM 2831]
Length = 539
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY +E++GRNCRFLQ P D
Sbjct: 38 TTRMPMIVTDPRQPDNPIIFANRAFLAMTGYTPEELIGRNCRFLQ---------GPDTDR 88
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V+++R + E EF E+LN++K+G+ N L ++P+ + DG + + G Q+
Sbjct: 89 DSVAQVRAAIAEKREFATEILNYRKNGSTFWNALFVSPVYNADGELVYYFGSQL 142
>gi|82752394|ref|XP_727284.1| protein serine/threonine phosphatase alpha [Plasmodium yoelii
yoelii 17XNL]
gi|23483052|gb|EAA18849.1| protein serine/threonine phosphatase alpha [Plasmodium yoelii
yoelii]
Length = 881
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 126/261 (48%), Gaps = 30/261 (11%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGC----GRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
P R+GHT + L + + +FGG G+ + +D+++ DL Q W ++ P R
Sbjct: 22 PVPRFGHTATYLGNNKVAIFGGAIGDAGKYNITDDIYLYDL--TQNKWKKLITENTPTAR 79
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVL-LSDTYLLDLTTD-KPMWREIPTS-WSPPSRLGHS 467
+ H++ ++ +LV+ GG T G L L D Y+LDL + K W +PT SP R GH
Sbjct: 80 AAHAAACVDEQQLVIYGGATGGGSLSLDDLYILDLRREQKYSWMTVPTKGVSPGRRYGHV 139
Query: 468 LSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPP 527
+ VY + +++FGG G L +++ E W Q+ + S ++ +P
Sbjct: 140 M-VYSKPNLIVFGG--NDGQHTLNDVWFMNVEMPPFE--WIQV-------IISNTSKMPS 187
Query: 528 PRLDHVAVSM----PCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVP---GQPP 580
PR+ H A G I+IFGG + S + + L + W + P G PP
Sbjct: 188 PRVYHSADMCKEGPATGMIVIFGGRNSENKSLNDTWGLRQHRDG-RWDWVEAPIKKGSPP 246
Query: 581 KFAWGHSTCVVGGTRVLVLGG 601
+ + H TCV G+++ VLGG
Sbjct: 247 EARYQH-TCVFIGSKLFVLGG 266
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGE-GVNMQPMDDTFVLNLDAAN 343
L L W+K + +AC +LV++GG G +DD ++L+L
Sbjct: 59 LYDLTQNKWKKLITENTPTARAAHAAACVDEQQLVIYGGATGGGSLSLDDLYILDLRREQ 118
Query: 344 P-EWRRVSVKSSPPGR-WGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV 401
W V K PGR +GH + + L+VFGG Q LNDV+ ++++ WI+V
Sbjct: 119 KYSWMTVPTKGVSPGRRYGHVMVYSKPN-LIVFGGNDGQHTLNDVWFMNVEMPPFEWIQV 177
Query: 402 ---SGGAPPLPRSWHSSCIIE----GSKLVVSGGCTDAGVLLSDTYLLDLTTD-KPMWRE 453
+ P PR +HS+ + + +V+ GG L+DT+ L D + W E
Sbjct: 178 IISNTSKMPSPRVYHSADMCKEGPATGMIVIFGGRNSENKSLNDTWGLRQHRDGRWDWVE 237
Query: 454 IPTSW-SPPSRLGHSLSVYGRTKVLMFGGLAKSG 486
P SPP V+ +K+ + GG +G
Sbjct: 238 APIKKGSPPEARYQHTCVFIGSKLFVLGGRNDNG 271
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGN-RLVLFGG---EGVNMQPMDDTFVLNLDAANPEW 346
VC RK +G + R +A GN ++ +FGG + DD ++ +L +W
Sbjct: 11 VC-RKEKQKGDIPVPRFGHTATYLGNNKVAIFGGAIGDAGKYNITDDIYLYDL--TQNKW 67
Query: 347 RRVSVKSSPPGRWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQP-TWIEV-S 402
+++ +++P R H + ++ LV++GG G L+D+++LDL +Q +W+ V +
Sbjct: 68 KKLITENTPTARAAHAAACVDEQQLVIYGGATGGGSLSLDDLYILDLRREQKYSWMTVPT 127
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI---PTSWS 459
G P R H + L+V GG D L+D + +++ W ++ TS
Sbjct: 128 KGVSPGRRYGH-VMVYSKPNLIVFGG-NDGQHTLNDVWFMNVEMPPFEWIQVIISNTSKM 185
Query: 460 PPSRLGHSLSVY----GRTKVLMFGG 481
P R+ HS + +++FGG
Sbjct: 186 PSPRVYHSADMCKEGPATGMIVIFGG 211
>gi|403334897|gb|EJY66618.1| Serine/threonine-protein phosphatase [Oxytricha trifallax]
Length = 782
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 33/265 (12%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGC----GRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
P R+GHT++ ++ S +V+FGG G+ + D + LDL + + T +E SG AP PR
Sbjct: 11 PLARFGHTITQVSKSKVVLFGGATGDTGKYIITGDTYALDLISYKWTKLEGSGIAPS-PR 69
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVLLSDT-YLLDLTT--DKPMWREIP-TSWSPPSRLGH 466
+ H SC ++ ++V+ GG T G L SD YLLDL W +P +P R GH
Sbjct: 70 AAHGSCSVDQLQMVIYGGATGGGSLASDDLYLLDLRNGDQAAQWMIVPIVGQTPGRRYGH 129
Query: 467 SLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVP 526
++ V+ + +L+F G + + + + +++ W +LE P
Sbjct: 130 TI-VFSKPFLLVFAGNTGTEAVN----DVWCLNVDKAPFSWTKLET---------PGEAP 175
Query: 527 PPRLDHVA----VSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQP--- 579
R+ H A G ++IFGG A + + L + W + P +P
Sbjct: 176 IVRVYHSAALCQTGSATGMMVIFGGRTADQSALKDTWGLRRHRDG-RWDWVKAPYKPNTE 234
Query: 580 -PKFAWGHSTCVVGGTRVLVLGGHT 603
P + HST V GT ++VLGG T
Sbjct: 235 EPLARYQHSTIFV-GTLMMVLGGRT 258
>gi|134095595|ref|YP_001100670.1| hypothetical protein HEAR2418 [Herminiimonas arsenicoxydans]
gi|133739498|emb|CAL62549.1| Hypothetical protein, PAS and GGDEF domain [Herminiimonas
arsenicoxydans]
Length = 313
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
++ADA PD P+I+ N FE +GY +++LGRNCRFLQ D +AQR +S
Sbjct: 18 ILIADARAPDHPVIFANPAFEQLSGYDLEDILGRNCRFLQGTD-QAQRN--------ISI 68
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNH 175
+ LE+G L N++KDG+ N L ++P+ D G +TH IGIQ A++ L
Sbjct: 69 LANSLEKGKHSIVTLRNYRKDGSLFWNELSISPVFDQSGVLTHFIGIQKDVTARVVLEQ 127
>gi|448566261|ref|ZP_21636806.1| HTR-like protein [Haloferax prahovense DSM 18310]
gi|445714206|gb|ELZ65972.1| HTR-like protein [Haloferax prahovense DSM 18310]
Length = 712
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 61/111 (54%), Gaps = 10/111 (9%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P V+ D D PI+YVN F TGY DE +GRNCRFLQ + D
Sbjct: 275 PIGVVLTDPDQADNPIVYVNDEFTDITGYSRDEAVGRNCRFLQGEE---------TDEAA 325
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+R ++E ELLN++KDGT NR+R+API D G+V +G Q
Sbjct: 326 VAELRAAVDEREPVTTELLNYRKDGTEFWNRVRIAPIF-DGGSVDLFVGFQ 375
>gi|440803638|gb|ELR24523.1| SAM domain (Sterile alpha motif) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 600
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 35/217 (16%)
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLN------------ 338
+ W K G V R ++ A GNRL +FGG G ++ ++D +L+
Sbjct: 37 LTWSKPITSGPVPGPRAGHTSSAVGNRLFVFGG-GNGIRYLNDLHLLDAVGTKLVVIGGG 95
Query: 339 -----------LDAANPEWRRVSVKS-SPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDV 386
LD W R K +P GRWGHT + + L++FGG +LNDV
Sbjct: 96 DDSRVYNDVYVLDTVTMSWTRPITKGPNPTGRWGHTATLIGTDQLLIFGGHDGTRMLNDV 155
Query: 387 FVLDLDAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLD-- 443
+LD ++ W ++S G P PR+ H++ + G LV GG D +L+D Y+ D
Sbjct: 156 HILDTESM--AWQQISPHGQIPCPRAGHTATSVTGKLLVFGGG--DGSRILNDLYVFDPA 211
Query: 444 -LTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMF 479
LT +P + + +P R H+ + + +L+F
Sbjct: 212 TLTFTRPTLQH--PAHTPAGRCAHTATPLDDSTLLVF 246
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 123/292 (42%), Gaps = 57/292 (19%)
Query: 315 GNRLVLFGGEGVNMQPMDDTFVLNLD---AANP--EWRRVSVKSSPPG-RWGHTLSSLNG 368
GN V G +G M ++D VL+ D A P W + PG R GHT S++ G
Sbjct: 5 GNVFVYGGWDGNQM--LNDLHVLHTDLVSAPQPILTWSKPITSGPVPGPRAGHTSSAV-G 61
Query: 369 SWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGG 428
+ L VFGG LND+ +LD G+KLVV GG
Sbjct: 62 NRLFVFGGGNGIRYLNDLHLLD---------------------------AVGTKLVVIGG 94
Query: 429 CTDAGVLLSDTYLLDLTTDKPMW-REIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGH 487
D+ V +D Y+LD T W R I +P R GH+ ++ G ++L+FGG H
Sbjct: 95 GDDSRVY-NDVYVLDTVTMS--WTRPITKGPNPTGRWGHTATLIGTDQLLIFGG-----H 146
Query: 488 LRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG 547
R I L E W+Q+ S +P PR H A S+ G++++FGG
Sbjct: 147 DGTRMLNDVHI-LDTESMAWQQI---------SPHGQIPCPRAGHTATSV-TGKLLVFGG 195
Query: 548 SIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVL 599
G + L++ DP+ + L P P H+ + + +LV
Sbjct: 196 G-DGSRILNDLYVFDPATLTFTRPTLQHPAHTPAGRCAHTATPLDDSTLLVF 246
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
E++ W++ + G + R +A + +L++FGG G + ++D +V D A + R
Sbjct: 161 ESMAWQQISPHGQIPCPRAGHTATSVTGKLLVFGG-GDGSRILNDLYVF--DPATLTFTR 217
Query: 349 VSVKS---SPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLD 390
+++ +P GR HT + L+ S L+VFGG D+++LD
Sbjct: 218 PTLQHPAHTPAGRCAHTATPLDDSTLLVFGGGDGGRRFKDLYLLD 262
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 26/117 (22%)
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEK-------------- 567
S VP PR H + ++ R+ +FGG G+ + L LLD K
Sbjct: 45 SGPVPGPRAGHTSSAV-GNRLFVFGGG-NGIRYLNDLHLLDAVGTKLVVIGGGDDSRVYN 102
Query: 568 ---------PSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHEL 615
SW G P WGH+ ++G ++L+ GGH G +LN++H L
Sbjct: 103 DVYVLDTVTMSWTRPITKGPNPTGRWGHTATLIGTDQLLIFGGHDGTR-MLNDVHIL 158
>gi|84996727|ref|XP_953085.1| serine/threonine phosphatase [Theileria annulata strain Ankara]
gi|65304081|emb|CAI76460.1| serine/threonine phosphatase, putative [Theileria annulata]
Length = 795
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 56/292 (19%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGC----GRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
PP R+GHT +S+ +V+FGG GR + +D F+ D+ W ++ PP PR
Sbjct: 14 PPPRFGHTTTSVGSGKVVLFGGAVGDVGRYTITSDSFLYDVTTNH--WTKLQTENPPSPR 71
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVLLSDT----------------YLLDLTTDKPM-WRE 453
+ H++ +E ++V+ GG T G L SD +LLDL DK + W
Sbjct: 72 AAHAAACVETMQVVIFGGATGGGALSSDDVLNYIPILIYIAMYILFLLDLRRDKQLSWII 131
Query: 454 IPTS-WSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLEC 512
+PT+ SP R GH++ V+ + +++ GG ++ S + + +++ W ++
Sbjct: 132 VPTTGRSPGRRYGHTM-VFSKPNLILIGG----NDGQMPSNDVWVLNVEQSPFSWNEVTF 186
Query: 513 NAFTGVGSQSAVVPPPRLDHVAVSMPC-----GRIIIFGGSIAGLHSPSQLFLLDPSEEK 567
S + +PP R+ H + + C G I+IFGG S + L+ L +
Sbjct: 187 -------SPTIQLPPIRVYH-SSDLCCEGPANGMIVIFGGRGNESKSLNDLWGLRQHRDG 238
Query: 568 PSWRILNVP---GQPPKFAWGHS----------TCVVGGTRVLVLGGHTGEE 606
+W + P G P + H TC G++ ++LGG + +
Sbjct: 239 -TWDWIEAPINSGNKPDPRYQHYNSIDSIDNSITCSFVGSKFVILGGRSDSD 289
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 299 RGAVEPSRCNFSACAAGN-RLVLFGGEGVNM---QPMDDTFVLNLDAANPEWRRVSVKSS 354
+G V P R + + G+ ++VLFGG ++ D+F+ D W ++ ++
Sbjct: 10 QGDVPPPRFGHTTTSVGSGKVVLFGGAVGDVGRYTITSDSFLY--DVTTNHWTKLQTENP 67
Query: 355 PPGRWGHTLSSLNGSWLVVFGGCGRQGLLND-----------------VFVLDLDA-KQP 396
P R H + + +V+FGG G L+ +F+LDL KQ
Sbjct: 68 PSPRAAHAAACVETMQVVIFGGATGGGALSSDDVLNYIPILIYIAMYILFLLDLRRDKQL 127
Query: 397 TWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI-- 454
+WI V R + + + L++ GG D + +D ++L++ W E+
Sbjct: 128 SWIIVPTTGRSPGRRYGHTMVFSKPNLILIGG-NDGQMPSNDVWVLNVEQSPFSWNEVTF 186
Query: 455 -PTSWSPPSRLGHSLSVY----GRTKVLMFGG 481
PT PP R+ HS + +++FGG
Sbjct: 187 SPTIQLPPIRVYHSSDLCCEGPANGMIVIFGG 218
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 514 AFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHS---PSQLFLLDPSEEKPSW 570
A+ V Q VPPPR H S+ G++++FGG++ + S FL D + W
Sbjct: 2 AYLKVVPQQGDVPPPRFGHTTTSVGSGKVVLFGGAVGDVGRYTITSDSFLYDVTTNH--W 59
Query: 571 RILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTG 604
L PP H+ V +V++ GG TG
Sbjct: 60 TKLQTE-NPPSPRAAHAAACVETMQVVIFGGATG 92
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGG----------EGVNMQP------MDDTFV 336
W K P + +AC ++V+FGG + +N P M F+
Sbjct: 59 WTKLQTENPPSPRAAHAAACVETMQVVIFGGATGGGALSSDDVLNYIPILIYIAMYILFL 118
Query: 337 LNLDAANP-EWRRVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAK 394
L+L W V PG R+GHT+ + L++ GG Q NDV+VL+++
Sbjct: 119 LDLRRDKQLSWIIVPTTGRSPGRRYGHTM-VFSKPNLILIGGNDGQMPSNDVWVLNVEQS 177
Query: 395 QPTWIEVSGGA----PPLPRSWHSSCI-IEGSK---LVVSGGCTDAGVLLSDTYLLDLTT 446
+W EV+ PP+ R +HSS + EG +V+ GG + L+D + L
Sbjct: 178 PFSWNEVTFSPTIQLPPI-RVYHSSDLCCEGPANGMIVIFGGRGNESKSLNDLWGLRQHR 236
Query: 447 DKPM-WREIPTSW--SPPSRLGHSLSV 470
D W E P + P R H S+
Sbjct: 237 DGTWDWIEAPINSGNKPDPRYQHYNSI 263
>gi|312961435|ref|ZP_07775938.1| PAS [Pseudomonas fluorescens WH6]
gi|311284330|gb|EFQ62908.1| PAS [Pseudomonas fluorescens WH6]
Length = 519
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 48 LFYPTTPTS---FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR 104
LF+ TS +V D PD PII+ N+ F TGY DEV+GRNCRFLQ
Sbjct: 17 LFFAAMQTSHSAMIVTDPAQPDNPIIFANQAFLALTGYEQDEVIGRNCRFLQ-------- 68
Query: 105 RHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
P D + ++R LE E E++N++KDG+ N L LAP+ ++ G + + Q
Sbjct: 69 -GPHTDKDALRHVQRALERHHEVCVEVINYRKDGSTFWNELFLAPLFNERGQLVYFFASQ 127
Query: 165 I 165
+
Sbjct: 128 L 128
>gi|170747057|ref|YP_001753317.1| signal transduction histidine kinase [Methylobacterium
radiotolerans JCM 2831]
gi|170653579|gb|ACB22634.1| signal transduction histidine kinase [Methylobacterium
radiotolerans JCM 2831]
Length = 334
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 60/120 (50%), Gaps = 16/120 (13%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ DA PD PI + N F TGY ADE++GRNCR LQ P D V
Sbjct: 1 MVITDARAPDNPIAWANDAFLTATGYAADEIVGRNCRMLQ---------GPATDRSTVQR 51
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHV 176
IR +E ELLN++KDG+ N + + P+RD + G+ F A+ D+ HV
Sbjct: 52 IRSAVEAAEPISVELLNYRKDGSSFWNAMTITPVRDAE-------GLAYFYAAQADMTHV 104
>gi|159487329|ref|XP_001701675.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280894|gb|EDP06650.1| predicted protein [Chlamydomonas reinhardtii]
Length = 104
Score = 83.2 bits (204), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 10/107 (9%)
Query: 59 VADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIR 118
+AD PD P+IY N F TGY A VLG+NCRFLQ +Q P++D ++
Sbjct: 3 IADCSLPDMPLIYANAGFVRTTGYSAAYVLGKNCRFLQGEGTDSQ---PVLD------LK 53
Query: 119 RCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRD-DDGTVTHIIGIQ 164
+ + EG +LLN+KK+G P VN L L PI D G +TH +G+Q
Sbjct: 54 KAISEGKSCVVQLLNYKKNGDPFVNYLSLTPIHDAATGRLTHYVGVQ 100
>gi|281209452|gb|EFA83620.1| hypothetical protein PPL_02686 [Polysphondylium pallidum PN500]
Length = 560
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 149/325 (45%), Gaps = 29/325 (8%)
Query: 291 VCWRKFTVRG-AVEPSRCNFSAC--AAGNRLVLFGG-EGVNMQPMDDTFVLNLDAANPEW 346
+ W + ++ G V P RC S+ + N + LFGG +G + +DD NL+ ++ ++
Sbjct: 1 MSWTRCSINGNKVMPVRCAHSSVFISKKNSIYLFGGWDGSRV--LDDLIRFNLETSSWDF 58
Query: 347 RRVSVKSSPPGRWGHTLSSL-NGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV-SGG 404
P R GH+ + L N + ++FGG + ++VF+ D D Q W E+ + G
Sbjct: 59 PLPITGKIPWKRAGHSGTPLPNSNSFLIFGGSDGEHYTSEVFIFDCDRMQ--WNEINTTG 116
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS--PPS 462
P PRS HS+ ++ +K+ + GG +D + Y+LDL+T M IP PP+
Sbjct: 117 TIPQPRSRHSASLV-NNKIYIYGG-SDGSRSFNSLYVLDLST---MRWSIPNCNGDIPPA 171
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQS 522
GHS +YG K+ FGG +DL + E WK V S +
Sbjct: 172 TWGHSSILYG-NKLYFFGGSDSDSMSMSSMLN--ILDLSNHE--WK-----VNVKVASDA 221
Query: 523 AVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKF 582
+ PP + ++ I++FGG+ + F+LD S + W+ + P
Sbjct: 222 SNAPPLGRAGHSFTLVKDNIVLFGGASDNDKILNDTFVLDLSSDSLVWKKF-LGEHTPTN 280
Query: 583 AWGHSTCVVGGTRVLVLGGHTGEEW 607
H++ +V ++ + GG +++
Sbjct: 281 RCAHTSEIVNN-KIYIFGGSDSKQY 304
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 15/171 (8%)
Query: 288 LEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWR 347
L + W G + P+ S+ GN+L FGG + M + LD +N EW+
Sbjct: 154 LSTMRWSIPNCNGDIPPATWGHSSILYGNKLYFFGGSDSDSMSMSSMLNI-LDLSNHEWK 212
Query: 348 RVSVK------SSPP-GRWGHTLSSLNGSWLVVFGGCG-RQGLLNDVFVLDLDAKQPTWI 399
V+VK ++PP GR GH+ + + + +V+FGG +LND FVLDL + W
Sbjct: 213 -VNVKVASDASNAPPLGRAGHSFTLVKDN-IVLFGGASDNDKILNDTFVLDLSSDSLVWK 270
Query: 400 EVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPM 450
+ G P R H+S I+ +K+ + GG +D+ D +LD+ DK M
Sbjct: 271 KFLGEHTPTNRCAHTSEIV-NNKIYIFGG-SDSKQYFKDIAILDV--DKVM 317
>gi|448630469|ref|ZP_21673124.1| HTR-like protein [Haloarcula vallismortis ATCC 29715]
gi|445756392|gb|EMA07767.1| HTR-like protein [Haloarcula vallismortis ATCC 29715]
Length = 726
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P V+ D D P+IY N + TGY E+LG+NCR LQ + +P
Sbjct: 281 PVGVVITDPDQTDNPLIYANDHYRDLTGYSLPELLGKNCRMLQGEN---------TEPEP 331
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ +R ++ EL N++KDGT NR+R+AP+RDDDGTV + +G Q
Sbjct: 332 VAAMRDAIDTEEHVTVELRNYRKDGTEFWNRVRIAPVRDDDGTVVNYVGFQ 382
>gi|322700020|gb|EFY91777.1| hypothetical protein MAC_02062 [Metarhizium acridum CQMa 102]
Length = 814
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
F + D D PI+++++ F T Y D V+GRNCRFLQ P +P V+
Sbjct: 236 FCLTDPSRHDNPIVFMSEDFNRTTQYGVDYVVGRNCRFLQ---------GPYTNPFSVTR 286
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR +E GIE LN+++DG+P +N + +AP+ D G + + IG Q+
Sbjct: 287 IREKMENGIEHYETFLNYRRDGSPFMNLIMVAPLYDSRGVIRYFIGAQV 335
>gi|12323816|gb|AAG51875.1|AC079678_5 hypothetical protein; 26726-23758 [Arabidopsis thaliana]
Length = 552
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 122/284 (42%), Gaps = 29/284 (10%)
Query: 346 WRRV-------SVKSSPPGRWGHTLSSLNGS-WLVVFGGCGRQG-LLNDVFVLDLDAKQP 396
W RV S P RWGHT +++ G +L VFGG GR L N V V DA+
Sbjct: 3 WERVQQVGLGDSSSFGPGKRWGHTCNAIKGGRFLYVFGGFGRDNCLTNQVHV--FDAETQ 60
Query: 397 TWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP 455
WI G PP PR H SC G L V GG TD L+D ++LD + + +I
Sbjct: 61 IWIRPEINGVPPCPRDSH-SCTTVGDNLFVFGG-TDGTKYLNDVHILDTYSHTWIRPDI- 117
Query: 456 TSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAF 515
P R HS ++ + ++ +FGG KS + L E WK+
Sbjct: 118 RGEGPRVREAHSAALVDK-RLFIFGGCGKSSDSDDEVFYNDLYILNTETYMWKR------ 170
Query: 516 TGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNV 575
+ ++ PP D S +II+ GG + S + +LD +K W+ L
Sbjct: 171 ----AVTSGKPPSARDSHTCSAWKNKIIVVGGEDLDDYYLSDVHILD--TDKFVWKELKT 224
Query: 576 PGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
GQ GH T + + V GG T + + ++L+ L L +
Sbjct: 225 SGQVLTPRAGHVTVAL-ERNLFVFGGFTDSQNLYDDLYVLDLET 267
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 123/265 (46%), Gaps = 36/265 (13%)
Query: 307 CNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPP-GRWGHTLSS 365
CN A G L +FGG G + + V DA W R + PP R H+ ++
Sbjct: 27 CN--AIKGGRFLYVFGGFGRDNCLTNQVHVF--DAETQIWIRPEINGVPPCPRDSHSCTT 82
Query: 366 LNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWI--EVSGGAPPLPRSWHSSCIIEGSKL 423
+ G L VFGG LNDV +LD TWI ++ G P + R HS+ +++ +L
Sbjct: 83 V-GDNLFVFGGTDGTKYLNDVHILD--TYSHTWIRPDIRGEGPRV-REAHSAALVD-KRL 137
Query: 424 VVSGGC-----TDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVL 477
+ GGC +D V +D Y+L+ T+ MW+ TS PPS R H+ S + + K++
Sbjct: 138 FIFGGCGKSSDSDDEVFYNDLYILN--TETYMWKRAVTSGKPPSARDSHTCSAW-KNKII 194
Query: 478 MFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSM 537
+ GG + + + +D ++ WK+L+ S V PR HV V++
Sbjct: 195 VVGGEDLDDYYL---SDVHILDT--DKFVWKELKT---------SGQVLTPRAGHVTVAL 240
Query: 538 PCGRIIIFGGSIAGLHSPSQLFLLD 562
+ +FGG + L++LD
Sbjct: 241 E-RNLFVFGGFTDSQNLYDDLYVLD 264
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 14/202 (6%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE---WRRV 349
W + +RG R SA RL +FGG G + D+ F +L N E W+R
Sbjct: 112 WIRPDIRGEGPRVREAHSAALVDKRLFIFGGCGKSSDSDDEVFYNDLYILNTETYMWKRA 171
Query: 350 SVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV-SGGAPP 407
PP R HT S+ +VV G L+DV +LD D + W E+ + G
Sbjct: 172 VTSGKPPSARDSHTCSAWKNKIIVVGGEDLDDYYLSDVHILDTD--KFVWKELKTSGQVL 229
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHS 467
PR+ H + +E L V GG TD+ L D Y+LDL T +W ++ PS S
Sbjct: 230 TPRAGHVTVALE-RNLFVFGGFTDSQNLYDDLYVLDLET--GVWSKVVAMVEGPSARFSS 286
Query: 468 LSV----YGRTKVLMFGGLAKS 485
+V Y GG K+
Sbjct: 287 AAVCLDPYKAGSFFFVGGCNKN 308
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 3/160 (1%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
+ E W++ G +R + + A N++++ GGE ++ + D +L+ D
Sbjct: 160 ILNTETYMWKRAVTSGKPPSARDSHTCSAWKNKIIVVGGEDLDDYYLSDVHILDTDKFVW 219
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
+ + S + P R GH +L + V G Q L +D++VLDL+ + +
Sbjct: 220 KELKTSGQVLTP-RAGHVTVALERNLFVFGGFTDSQNLYDDLYVLDLETGVWSKVVAMVE 278
Query: 405 APPLPRSWHSSCI--IEGSKLVVSGGCTDAGVLLSDTYLL 442
P S + C+ + GGC L D Y L
Sbjct: 279 GPSARFSSAAVCLDPYKAGSFFFVGGCNKNLEPLDDIYYL 318
>gi|28870075|ref|NP_792694.1| sensory box histidine kinase/response regulator [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213966898|ref|ZP_03395048.1| sensory box histidine kinase/response regulator [Pseudomonas
syringae pv. tomato T1]
gi|301381580|ref|ZP_07229998.1| histidine kinase [Pseudomonas syringae pv. tomato Max13]
gi|302061664|ref|ZP_07253205.1| histidine kinase [Pseudomonas syringae pv. tomato K40]
gi|302134348|ref|ZP_07260338.1| histidine kinase [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|81730912|sp|Q881J7.1|LOVHK_PSESM RecName: Full=Blue-light-activated protein; Includes: RecName:
Full=Blue-light-activated histidine kinase; AltName:
Full=PS-LOV-histidine kinase; Short=PS-LOV-HK; Includes:
RecName: Full=Response regulator
gi|28853321|gb|AAO56389.1| sensory box histidine kinase/response regulator [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213928220|gb|EEB61765.1| sensory box histidine kinase/response regulator [Pseudomonas
syringae pv. tomato T1]
Length = 534
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY A+E+LG NCRFLQ P DP
Sbjct: 30 TTRMPMIVTDPNRPDNPIIFSNRAFLEMTGYTAEEILGTNCRFLQ---------GPDTDP 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV IR + + + E++N++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AVVQSIRDAIAQRNDISAEIINYRKDGSSFWNALFISPVYNDAGDLIYFFASQL 134
>gi|163848652|ref|YP_001636696.1| PAS sensor protein [Chloroflexus aurantiacus J-10-fl]
gi|222526588|ref|YP_002571059.1| multi-sensor hybrid histidine kinase [Chloroflexus sp. Y-400-fl]
gi|163669941|gb|ABY36307.1| PAS sensor protein [Chloroflexus aurantiacus J-10-fl]
gi|222450467|gb|ACM54733.1| multi-sensor hybrid histidine kinase [Chloroflexus sp. Y-400-fl]
Length = 915
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 10/114 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
+VADA PD+PI +VN+ F TGY +EV+GR+C FLQ P D V+ I
Sbjct: 48 IVADA-QPDYPITFVNRAFCTITGYAPEEVIGRHCLFLQ---------GPGTDQAAVTRI 97
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
+ LLN++KDG P +++ ++P+RDD G VT IG+Q A++
Sbjct: 98 CEAIAAARPVHERLLNYRKDGQPFWSQIAISPVRDDQGRVTAFIGLQTDVTAQV 151
>gi|448677831|ref|ZP_21689021.1| HTR-like protein [Haloarcula argentinensis DSM 12282]
gi|445773506|gb|EMA24539.1| HTR-like protein [Haloarcula argentinensis DSM 12282]
Length = 748
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++A D PI Y N+ F TGY EV GRNCRFLQ A P
Sbjct: 265 PIGIILAGPKQDDAPITYANRRFLELTGYTESEVRGRNCRFLQ---GEATESEP------ 315
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V +R ++EG EL N++KDGT N++ +AP+RDDDGTV + +G Q
Sbjct: 316 VDAMRAAVDEGDPVSVELRNYRKDGTMFWNQVSIAPVRDDDGTVVNYVGFQ 366
>gi|145494764|ref|XP_001433376.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400493|emb|CAK65979.1| unnamed protein product [Paramecium tetraurelia]
Length = 433
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 61/302 (20%)
Query: 339 LDAANPEWRRVSVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQG------LLNDVFVLDL 391
D +W ++ PP R GH+ ++L+G+ +++FGG LND + +D+
Sbjct: 78 FDQRKWQWAEPLIEGVPPCARGGHS-ATLSGASIILFGGHYYANKDEGYKYLNDTYQMDV 136
Query: 392 DAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPM 450
+A + W + G PP PR HS+ ++ G ++++ GG + V D + LD T
Sbjct: 137 NANR--WFKAKVQGTPPAPRYAHSA-VLAGQRIIIFGGKGEKCV-FRDLHALDPLT--LT 190
Query: 451 WREIPT-SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQ 509
W + P S SP +R HS ++Y TK+++FGG + + Y +DL E W Q
Sbjct: 191 WYQGPEGSGSPSARFAHSATLYASTKMIIFGGWNGIDYFN----DLYVLDL--EVMAWSQ 244
Query: 510 LECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-------SIAGLHSPSQ----- 557
C + P PR H A+ + +II GG ++ LH +
Sbjct: 245 PPC---------TGPSPTPRQGHTAIQV-GANLIIQGGFYYQEDKTLKTLHKTANPRHGS 294
Query: 558 ---------LFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWV 608
+ +LD E +W L V G PP +GHS V G ++V GG W
Sbjct: 295 HLRGCYLNDIRILD--TEHFAWSRLRVSGTPPAPRYGHSAN-VSGADIVVFGG-----WS 346
Query: 609 LN 610
LN
Sbjct: 347 LN 348
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 51/341 (14%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGV-----NMQPMDDTFVLNLDAANPEWR 347
W + + G +R SA +G ++LFGG + ++DT+ ++++A W
Sbjct: 85 WAEPLIEGVPPCARGGHSATLSGASIILFGGHYYANKDEGYKYLNDTYQMDVNAN--RWF 142
Query: 348 RVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIE-VSGGA 405
+ V+ +PP R+ H+ + L G +++FGG G + + D+ LD TW + G
Sbjct: 143 KAKVQGTPPAPRYAHS-AVLAGQRIIIFGGKGEKCVFRDLHA--LDPLTLTWYQGPEGSG 199
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP-TSWSPPSRL 464
P R HS+ + +K+++ GG +D Y+LDL + W + P T SP R
Sbjct: 200 SPSARFAHSATLYASTKMIIFGGWNGID-YFNDLYVLDL--EVMAWSQPPCTGPSPTPRQ 256
Query: 465 GHSLSVYGRTKVLMFG----------GLAKSGHLR----LRSGESYTIDLGDEEP-QWKQ 509
GH+ G ++ G L K+ + R LR I + D E W +
Sbjct: 257 GHTAIQVGANLIIQGGFYYQEDKTLKTLHKTANPRHGSHLRGCYLNDIRILDTEHFAWSR 316
Query: 510 LECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG--------SIAGLHSPSQL-FL 560
L S P PR H A ++ I++FGG S +P + +L
Sbjct: 317 LRV---------SGTPPAPRYGHSA-NVSGADIVVFGGWSLNSGARSENNFATPPDIDYL 366
Query: 561 LDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 601
+ + EK W G P+ +GH+ + G +L+ GG
Sbjct: 367 IVLNTEKMCWEKAKYEGNAPRNRYGHTATSI-GPHILIFGG 406
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 35/236 (14%)
Query: 391 LDAKQPTWIE-VSGGAPPLPRSWHSSCIIEGSKLVVSGG----CTDAGV-LLSDTYLLDL 444
D ++ W E + G PP R HS+ + G+ +++ GG D G L+DTY +D+
Sbjct: 78 FDQRKWQWAEPLIEGVPPCARGGHSATL-SGASIILFGGHYYANKDEGYKYLNDTYQMDV 136
Query: 445 TTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE 503
++ W + +PP+ R HS + G+ ++++FGG + R DL
Sbjct: 137 NANR--WFKAKVQGTPPAPRYAHSAVLAGQ-RIIIFGGKGEKCVFR---------DLHAL 184
Query: 504 EP---QWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFL 560
+P W Q G + + P R H A ++IIFGG G+ + L++
Sbjct: 185 DPLTLTWYQ---------GPEGSGSPSARFAHSATLYASTKMIIFGG-WNGIDYFNDLYV 234
Query: 561 LDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELC 616
LD E +W G P GH+ VG ++ G + E+ L LH+
Sbjct: 235 LD--LEVMAWSQPPCTGPSPTPRQGHTAIQVGANLIIQGGFYYQEDKTLKTLHKTA 288
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVN---------MQPMDDTFVLNL 339
E W + V G R SA +G +V+FGG +N P D +++ L
Sbjct: 310 EHFAWSRLRVSGTPPAPRYGHSANVSGADIVVFGGWSLNSGARSENNFATPPDIDYLIVL 369
Query: 340 DAANPEWRRVSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVL-DLDAKQ 395
+ W + + ++P R+GHT +S+ G +++FGG N V VL DL+ Q
Sbjct: 370 NTEKMCWEKAKYEGNAPRNRYGHTATSI-GPHILIFGGWEYNRATNQVVVLRDLNVGQ 426
>gi|448339592|ref|ZP_21528610.1| bacterio-opsin activator [Natrinema pallidum DSM 3751]
gi|445619581|gb|ELY73108.1| bacterio-opsin activator [Natrinema pallidum DSM 3751]
Length = 649
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++YVN+ +E TGY DEV+GRNCRFLQ D D
Sbjct: 140 PVGITISDPDREDNPLVYVNEAYEEMTGYEFDEVVGRNCRFLQGEDS---------DEAA 190
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++++ ++E EL N++KDGT N + +AP+RD+DG VT+ +G Q
Sbjct: 191 IADMAAAIDEDRPVTVELKNYRKDGTEFWNEVTIAPVRDEDGRVTNYVGFQ 241
>gi|392577337|gb|EIW70466.1| hypothetical protein TREMEDRAFT_73480 [Tremella mesenterica DSM
1558]
Length = 765
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
SF+V D D PI+Y + F TGY ++LGRNCRFLQ D + + D +
Sbjct: 197 SFLVVDVRRFDCPIVYASPTFSALTGYELPQILGRNCRFLQAPDGDVVKGSKRKYTDNIA 256
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VS ++R L G E Q L+N+++ G P +N + + PI D + + +G Q+
Sbjct: 257 VSHLKRMLNAGKECQASLINYRRGGVPFINLVTVVPIPWDGTDIVYHVGFQV 308
>gi|313126511|ref|YP_004036781.1| pas domain s-box [Halogeometricum borinquense DSM 11551]
gi|448286665|ref|ZP_21477890.1| pas domain s-box [Halogeometricum borinquense DSM 11551]
gi|312292876|gb|ADQ67336.1| PAS domain S-box [Halogeometricum borinquense DSM 11551]
gi|445574042|gb|ELY28551.1| pas domain s-box [Halogeometricum borinquense DSM 11551]
Length = 648
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 21/112 (18%)
Query: 59 VADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ--YRDP-RAQRRHPLVD---PV 112
++D +P+ P+IYVN+ FE TGY A+E LGRN FLQ DP R+QR +D PV
Sbjct: 312 ISDIREPNEPLIYVNEGFERVTGYSAEETLGRNLCFLQGEQTDPERSQRLETAIDAGEPV 371
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
VV EL+N+++DGTP N++ LAP+ D G +TH +G Q
Sbjct: 372 VV---------------ELINYRRDGTPFWNQIYLAPVDDKTGAITHYVGFQ 408
>gi|428178967|gb|EKX47840.1| hypothetical protein GUITHDRAFT_159530 [Guillardia theta CCMP2712]
Length = 4460
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 125/275 (45%), Gaps = 48/275 (17%)
Query: 306 RCNFSACAAGNRLVLFGG---EGVNMQPMDDTFVLNLDAANPEWRRVSV--KSSPPGRWG 360
R S G R ++FGG + +++ + + L + +W ++ +S PP RW
Sbjct: 19 RSGHSLNIVGRRAIVFGGCTEQDDKPTILNEAYCIELSSNEYKWLKLDPEDRSIPPPRWR 78
Query: 361 HTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV-SGGAPPLPRSWHSSCIIE 419
HT ++++ + L VFGG G + LND F+LDL+ + P W +V S G PP PRS+H++ +
Sbjct: 79 HTGNTISDTELFVFGGIGEKCRLNDSFILDLEPETPIWSDVSSNGIPPSPRSYHTASLC- 137
Query: 420 GSKLVVSGGCTDAGVL---LSDTYLLDLTTDKPMWRE-------------IPTSWSPPS- 462
++ V GG G +D ++ D+ T + E I T S PS
Sbjct: 138 NKRIYVFGGYGGHGERRQHFNDMHIFDIETRTWLGEENGISVEREGFHRGIKTEGSLPSP 197
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNA---FTGVG 519
R H+ +V +T +++ GG R Y D + C A +T +
Sbjct: 198 RCNHTTNVIEKTFLIVTGG---------RDSNQYFDD--------THIFCTATFTWTQIR 240
Query: 520 SQSAVVPPPRL-DHVA---VSMPCGRIIIFGGSIA 550
+ + P RL H+A S+P + +FGG +
Sbjct: 241 NLANPTAPTRLCSHLAEGVQSVPSYYLFVFGGQTS 275
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 14/264 (5%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGCGRQG----LLNDVFVLDLDAKQPTWIEV--SGGAPPL 408
P GR GH+L+ + G +VFGGC Q +LN+ + ++L + + W+++ + P
Sbjct: 16 PTGRSGHSLN-IVGRRAIVFGGCTEQDDKPTILNEAYCIELSSNEYKWLKLDPEDRSIPP 74
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSL 468
PR H+ I ++L V GG + L+D+++LDL + P+W ++ ++ PPS +
Sbjct: 75 PRWRHTGNTISDTELFVFGGIGEK-CRLNDSFILDLEPETPIWSDVSSNGIPPSPRSYHT 133
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDE----EPQWKQLECNAFTGVGSQSAV 524
+ ++ +FGG G R + + D+ E +E F
Sbjct: 134 ASLCNKRIYVFGGYGGHGERRQHFNDMHIFDIETRTWLGEENGISVEREGFHRGIKTEGS 193
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 584
+P PR +H + +I+ GG + + + R L P P +
Sbjct: 194 LPSPRCNHTTNVIEKTFLIVTGGRDSNQYFDDTHIFCTATFTWTQIRNLANPTAPTRLCS 253
Query: 585 GHSTCV--VGGTRVLVLGGHTGEE 606
+ V V + V GG T E
Sbjct: 254 HLAEGVQSVPSYYLFVFGGQTSHE 277
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 41/240 (17%)
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCT---DAGVLLSDTYLLDLTTDKPMWREI-PTSW 458
G P RS HS I+ G + +V GGCT D +L++ Y ++L++++ W ++ P
Sbjct: 12 SGERPTGRSGHSLNIV-GRRAIVFGGCTEQDDKPTILNEAYCIELSSNEYKWLKLDPEDR 70
Query: 459 S-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTG 517
S PP R H+ + T++ +FGG+ + + R +S+ +DL E P W + N
Sbjct: 71 SIPPPRWRHTGNTISDTELFVFGGIGE----KCRLNDSFILDLEPETPIWSDVSSNG--- 123
Query: 518 VGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP---SEEKPSW---- 570
+ P PR H A S+ RI +FGG G H + D E +W
Sbjct: 124 ------IPPSPRSYHTA-SLCNKRIYVFGG--YGGHGERRQHFNDMHIFDIETRTWLGEE 174
Query: 571 -----------RILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
R + G P H+T V+ T ++V GG ++ ++ H C A+
Sbjct: 175 NGISVEREGFHRGIKTEGSLPSPRCNHTTNVIEKTFLIVTGGRDSNQY-FDDTHIFCTAT 233
>gi|443323721|ref|ZP_21052724.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Gloeocapsa sp. PCC 73106]
gi|442786507|gb|ELR96237.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Gloeocapsa sp. PCC 73106]
Length = 1137
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
V+ DA D P++YVN+ F TGY ++EV G NCRFLQ + +R P ++ EI
Sbjct: 210 VITDALASDNPVVYVNQSFTKITGYSSEEVTGNNCRFLQGK----ERLQPEIE-----EI 260
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R + +G E L N+++DGT N L L PI D G++TH +GIQ
Sbjct: 261 RNAIAQGKECYTILRNYRQDGTLFWNELYLTPICDRHGSLTHFLGIQ 307
>gi|334183908|ref|NP_177555.3| kelch motif-containing protein [Arabidopsis thaliana]
gi|332197439|gb|AEE35560.1| kelch motif-containing protein [Arabidopsis thaliana]
Length = 569
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 122/284 (42%), Gaps = 29/284 (10%)
Query: 346 WRRV-------SVKSSPPGRWGHTLSSLNGS-WLVVFGGCGRQG-LLNDVFVLDLDAKQP 396
W RV S P RWGHT +++ G +L VFGG GR L N V V DA+
Sbjct: 3 WERVQQVGLGDSSSFGPGKRWGHTCNAIKGGRFLYVFGGFGRDNCLTNQVHV--FDAETQ 60
Query: 397 TWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP 455
WI G PP PR H SC G L V GG TD L+D ++LD + + +I
Sbjct: 61 IWIRPEINGVPPCPRDSH-SCTTVGDNLFVFGG-TDGTKYLNDVHILDTYSHTWIRPDI- 117
Query: 456 TSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAF 515
P R HS ++ + ++ +FGG KS + L E WK+
Sbjct: 118 RGEGPRVREAHSAALVDK-RLFIFGGCGKSSDSDDEVFYNDLYILNTETYMWKR------ 170
Query: 516 TGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNV 575
+ ++ PP D S +II+ GG + S + +LD +K W+ L
Sbjct: 171 ----AVTSGKPPSARDSHTCSAWKNKIIVVGGEDLDDYYLSDVHILD--TDKFVWKELKT 224
Query: 576 PGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
GQ GH T + + V GG T + + ++L+ L L +
Sbjct: 225 SGQVLTPRAGHVTVAL-ERNLFVFGGFTDSQNLYDDLYVLDLET 267
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 36/265 (13%)
Query: 307 CNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPP-GRWGHTLSS 365
CN A G L +FGG G + + V DA W R + PP R H+ ++
Sbjct: 27 CN--AIKGGRFLYVFGGFGRDNCLTNQVHVF--DAETQIWIRPEINGVPPCPRDSHSCTT 82
Query: 366 LNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWI--EVSGGAPPLPRSWHSSCIIEGSKL 423
+ G L VFGG LNDV +LD + TWI ++ G P + R HS+ +++ +L
Sbjct: 83 V-GDNLFVFGGTDGTKYLNDVHILDTYSH--TWIRPDIRGEGPRV-REAHSAALVD-KRL 137
Query: 424 VVSGGC-----TDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVL 477
+ GGC +D V +D Y+L+ T+ MW+ TS PPS R H+ S + + K++
Sbjct: 138 FIFGGCGKSSDSDDEVFYNDLYILN--TETYMWKRAVTSGKPPSARDSHTCSAW-KNKII 194
Query: 478 MFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSM 537
+ GG + + + +D ++ WK+L+ S V PR HV V++
Sbjct: 195 VVGGEDLDDYYL---SDVHILDT--DKFVWKELKT---------SGQVLTPRAGHVTVAL 240
Query: 538 PCGRIIIFGGSIAGLHSPSQLFLLD 562
+ +FGG + L++LD
Sbjct: 241 E-RNLFVFGGFTDSQNLYDDLYVLD 264
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 14/202 (6%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE---WRRV 349
W + +RG R SA RL +FGG G + D+ F +L N E W+R
Sbjct: 112 WIRPDIRGEGPRVREAHSAALVDKRLFIFGGCGKSSDSDDEVFYNDLYILNTETYMWKRA 171
Query: 350 SVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV-SGGAPP 407
PP R HT S+ +VV G L+DV +LD D + W E+ + G
Sbjct: 172 VTSGKPPSARDSHTCSAWKNKIIVVGGEDLDDYYLSDVHILDTD--KFVWKELKTSGQVL 229
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHS 467
PR+ H + +E L V GG TD+ L D Y+LDL T +W ++ PS S
Sbjct: 230 TPRAGHVTVALE-RNLFVFGGFTDSQNLYDDLYVLDLET--GVWSKVVAMVEGPSARFSS 286
Query: 468 LSV----YGRTKVLMFGGLAKS 485
+V Y GG K+
Sbjct: 287 AAVCLDPYKAGSFFFVGGCNKN 308
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 3/160 (1%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
+ E W++ G +R + + A N++++ GGE ++ + D +L+ D
Sbjct: 160 ILNTETYMWKRAVTSGKPPSARDSHTCSAWKNKIIVVGGEDLDDYYLSDVHILDTDKFVW 219
Query: 345 EWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
+ + S + P R GH +L + V G Q L +D++VLDL+ + +
Sbjct: 220 KELKTSGQVLTP-RAGHVTVALERNLFVFGGFTDSQNLYDDLYVLDLETGVWSKVVAMVE 278
Query: 405 APPLPRSWHSSCI--IEGSKLVVSGGCTDAGVLLSDTYLL 442
P S + C+ + GGC L D Y L
Sbjct: 279 GPSARFSSAAVCLDPYKAGSFFFVGGCNKNLEPLDDIYYL 318
>gi|220920804|ref|YP_002496105.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium nodulans
ORS 2060]
gi|219945410|gb|ACL55802.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium nodulans
ORS 2060]
Length = 814
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 45 PGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR 104
P + T ++ D PD PI++ N F+ TGY ++++GRNCR LQ
Sbjct: 29 PFITVLERTRQPMILTDPHLPDNPIVFANAAFQALTGYAEEDLVGRNCRLLQ-------- 80
Query: 105 RHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
P DP V+ IR + EG E + +LN++KDG P N L + P+ D+ G + + Q
Sbjct: 81 -GPDTDPATVARIRAAIAEGREIRASILNYRKDGRPFWNELFVCPVFDEAGRLINFFASQ 139
Query: 165 I 165
+
Sbjct: 140 V 140
>gi|443897798|dbj|GAC75137.1| kelch repeat-containing proteins [Pseudozyma antarctica T-34]
Length = 925
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 15/197 (7%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLF-GGEGVNMQPMDDTFVLNLDAANPEWR 347
E +CW K V G + P+R SA RL +F GG+G + +D FV D + W
Sbjct: 655 ETMCWSKPKVTGDIPPARRAHSATMVNKRLFVFAGGDGPHY--FNDLFV--FDTVSLRWS 710
Query: 348 RVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDL-DAKQPTWIEVS-GG 404
+ + + P R HT + G L++FGG G LNDV LD+ D + W ++ G
Sbjct: 711 KPEIGGNAPSPRRAHTCNYYEGQ-LIIFGGGNGVGALNDVHTLDVTDLSRLEWRKMECSG 769
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
P+ R +H+S +++G KL+V GG +D + +D ++L L D W ++ T +RL
Sbjct: 770 KVPIGRGYHTSSLVDG-KLIVIGG-SDGHMSFNDIHILRL--DTQTWYQVKTE-EIHNRL 824
Query: 465 GHSLSVYGRTKVLMFGG 481
GH+ + G + + +FGG
Sbjct: 825 GHTATQVG-SYLFIFGG 840
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 32/280 (11%)
Query: 346 WRRVSVKSSPPGR--WGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
W + V S P R HT ++L L +FGGC +G D++ D + + +V+G
Sbjct: 608 WSKAPVHGSVPRRSFRAHT-ANLCDEVLWLFGGCDNRGCFRDLWCFDTETMCWSKPKVTG 666
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS- 462
PP R+ HS+ ++ V +GG D +D ++ D + + W + + PS
Sbjct: 667 DIPPARRA-HSATMVNKRLFVFAGG--DGPHYFNDLFVFDTVSLR--WSKPEIGGNAPSP 721
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD-EEPQWKQLECNAFTGVGSQ 521
R H+ + Y ++++FGG G L + +T+D+ D +W+++EC
Sbjct: 722 RRAHTCNYY-EGQLIIFGGGNGVGAL----NDVHTLDVTDLSRLEWRKMEC--------- 767
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
S VP R H + S+ G++I+ GGS G S + + +L + +W V +
Sbjct: 768 SGKVPIGRGYHTS-SLVDGKLIVIGGS-DGHMSFNDIHILRLDTQ--TW--YQVKTEEIH 821
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
GH+ V G+ + + GGH + + +EL L L + Q
Sbjct: 822 NRLGHTATQV-GSYLFIFGGHDSKTYT-SELLTLNLVNLQ 859
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 8/161 (4%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++T L + WRK G V R ++ +L++ GG +M +D +L LD
Sbjct: 753 DVTDLSRLEWRKMECSGKVPIGRGYHTSSLVDGKLIVIGGSDGHMS-FNDIHILRLDTQT 811
Query: 344 PEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
W +V + R GHT + + GS+L +FGG + +++ L+L Q +V G
Sbjct: 812 --WYQVKTEEI-HNRLGHTATQV-GSYLFIFGGHDSKTYTSELLTLNLVNLQWEPRKVCG 867
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDL 444
P R +H + + + S+L V GG D + D + LDL
Sbjct: 868 KK-PQGRGYHQAWLRD-SRLFVHGGF-DGKDIFDDLHFLDL 905
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 21/185 (11%)
Query: 293 WRKFTVRG-AVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNL-DAANPEWRRVS 350
W K + G A P R + G ++ GG GV ++D L++ D + EWR++
Sbjct: 709 WSKPEIGGNAPSPRRAHTCNYYEGQLIIFGGGNGVGA--LNDVHTLDVTDLSRLEWRKME 766
Query: 351 VKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLP 409
P GR HT S ++G L+V GG ND+ +L LD + TW +V
Sbjct: 767 CSGKVPIGRGYHTSSLVDGK-LIVIGGSDGHMSFNDIHILRLDTQ--TWYQVK-TEEIHN 822
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT----------DKPMWREIPTSWS 459
R H++ + GS L + GG D+ S+ L+L KP R +W
Sbjct: 823 RLGHTATQV-GSYLFIFGGH-DSKTYTSELLTLNLVNLQWEPRKVCGKKPQGRGYHQAWL 880
Query: 460 PPSRL 464
SRL
Sbjct: 881 RDSRL 885
>gi|401625379|gb|EJS43389.1| kel1p [Saccharomyces arboricola H-6]
Length = 1175
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 138/296 (46%), Gaps = 44/296 (14%)
Query: 346 WRRVSVKSSPPGRWGHTLSSL--NGSWLVVFGGCGRQGLLNDVFVLD-LDAK---QPTWI 399
W R+ +++SP R+ H S+ + + + V GG Q + D +VL LD T I
Sbjct: 113 WNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGLHDQSVYGDTWVLTALDNATNFSTTTI 172
Query: 400 EVSGGAPPLPRSWHSSCIIEGSKLVVSGGCT----DAGVLLSDTYLLDLTTDKPMWREIP 455
++S PP PR H + I+ G+ VV GG T G++ D YLL++ + K W +P
Sbjct: 173 DISEATPP-PRVGH-AAILCGNAFVVFGGDTHKVNKEGLMDDDIYLLNINSYK--WT-VP 227
Query: 456 TSWSPP--SRLGHSLSVYG----RTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQ 506
T P R GH +S+ +TK+ +FGG + + DL +
Sbjct: 228 TPIGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTYF----NDLAVYDLSSFRRPDSH 283
Query: 507 WKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSE 565
W+ L+ FT PPP + +S ++ +FGG ++ GL + +F+ DP+
Sbjct: 284 WEFLKPKTFT---------PPPITNFTMISYDS-KLWVFGGDTLQGL--VNDVFMYDPA- 330
Query: 566 EKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
K W +++ G+ P H+T VV + V+GG + LN ++ L L S +
Sbjct: 331 -KNDWFVIDTKGEKPPPVQEHAT-VVYNDLMCVVGGKDEHDAYLNSVYFLNLKSHK 384
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 34/208 (16%)
Query: 317 RLVLFGGEGVNMQPMDDTFVLNLDA--------ANPEWRRVSVKS-SPPGRWGHTLSSLN 367
+L +FGG+ DDT+ +L + W + K+ +PP T+ S +
Sbjct: 253 KLYVFGGQ------FDDTYFNDLAVYDLSSFRRPDSHWEFLKPKTFTPPPITNFTMISYD 306
Query: 368 GSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSG 427
S L VFGG QGL+NDVF+ D I+ G PP P H++ + VV G
Sbjct: 307 -SKLWVFGGDTLQGLVNDVFMYDPAKNDWFVIDTKGEKPP-PVQEHATVVYNDLMCVV-G 363
Query: 428 GCTDAGVLLSDTYLLDLTTDKPMWREIP--TSWSPPSRLGHSLSVYGRTKVLMFGG---- 481
G + L+ Y L+L + K W ++P T+ P R GHSL++ K+L+ GG
Sbjct: 364 GKDEHDAYLNSVYFLNLKSHK--WFKLPVLTAGIPQGRSGHSLTLLKNDKILIMGGDKFD 421
Query: 482 LAKSGHLRLRSGES--------YTIDLG 501
A+ L + +S YT+DL
Sbjct: 422 YARVEEFDLHTSDSDMQRGTIVYTLDLA 449
>gi|297827115|ref|XP_002881440.1| kelch repeat-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297327279|gb|EFH57699.1| kelch repeat-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 498
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 121/267 (45%), Gaps = 33/267 (12%)
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAK-----QPTWIEVSGGAPP 407
+ P R GHT ++ S +VVFGG + L+D+ V D++ K + T E G P
Sbjct: 15 TPPQARSGHTAVNVGKSMVVVFGGLVDKKFLSDIIVYDIENKLWFEPECTGSESEGQVGP 74
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS--PPSRLG 465
PR++H + I+ + G G L D ++LD TD W E+ TS+ P R
Sbjct: 75 TPRAFHVAITIDCHMFIFGG--RSGGKRLGDFWVLD--TDIWQWSEL-TSFGDLPTPRDF 129
Query: 466 HSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVV 525
+ + G K+++ GG L + Y +D E W +L S S +
Sbjct: 130 AAAAAIGNQKIVLCGGWDGKKWL----SDVYVMDTMSLE--WMEL---------SVSGSL 174
Query: 526 PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLF----LLDPSEEKPSWRILNVPGQPPK 581
PPPR H A +M R+++FGG G L+ L+D E P W L +PGQ P
Sbjct: 175 PPPRCGHTA-TMVEKRLLVFGGRGGGGPIMGDLWALKGLIDEERETPGWTQLKLPGQAPS 233
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWV 608
GH T GG +L+ GGH W+
Sbjct: 234 SRCGH-TVTSGGHYLLLFGGHGTGGWL 259
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVL----NLDAANPEWRR 348
W + +V G++ P RC +A RL++FGG G M D + L + + P W +
Sbjct: 165 WMELSVSGSLPPPRCGHTATMVEKRLLVFGGRGGGGPIMGDLWALKGLIDEERETPGWTQ 224
Query: 349 VSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL-------NDVFVLDLDAKQPTWIE 400
+ + +P R GHT++S G +L++FGG G G L ND +LD Q +
Sbjct: 225 LKLPGQAPSSRCGHTVTS-GGHYLLLFGGHGTGGWLSRYDVYYNDTIILDRVTAQWKRLP 283
Query: 401 VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWRE--IPTSW 458
+S PP PR++H+ I L++ G D + D + L + D P+ + +P
Sbjct: 284 MSNEPPP-PRAYHTMTGIGARHLLIGG--FDGKLTFGDLWWL-VPEDDPIAKRSSVPQLI 339
Query: 459 SPP 461
+PP
Sbjct: 340 NPP 342
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W + T G + R +A A GN+ ++ G + + D +V +D + EW +SV
Sbjct: 114 WSELTSFGDLPTPRDFAAAAAIGNQKIVLCGGWDGKKWLSDVYV--MDTMSLEWMELSVS 171
Query: 353 SS-PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVL----DLDAKQPTWIEVS-GGAP 406
S PP R GHT + + LV G G ++ D++ L D + + P W ++ G
Sbjct: 172 GSLPPPRCGHTATMVEKRLLVFGGRGGGGPIMGDLWALKGLIDEERETPGWTQLKLPGQA 231
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAG------VLLSDTYLLDLTTDKPMWREIPTSWS- 459
P R H + G L++ GG G V +DT +LD T + W+ +P S
Sbjct: 232 PSSRCGH-TVTSGGHYLLLFGGHGTGGWLSRYDVYYNDTIILDRVTAQ--WKRLPMSNEP 288
Query: 460 PPSRLGHSLSVYGRTKVLMFG 480
PP R H+++ G +L+ G
Sbjct: 289 PPPRAYHTMTGIGARHLLIGG 309
>gi|443476320|ref|ZP_21066232.1| multi-sensor hybrid histidine kinase [Pseudanabaena biceps PCC
7429]
gi|443018713|gb|ELS32917.1| multi-sensor hybrid histidine kinase [Pseudanabaena biceps PCC
7429]
Length = 1179
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ D P+ PI+YVN FE +GY A E++G+NCRFLQ D Q + L
Sbjct: 296 IVITDVRLPNNPIVYVNSAFEKISGYTAGEIMGKNCRFLQGSDLFQQEKEIL-------- 347
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R +++G + + N++KDG+ N L ++PI D+ G VTH IGIQ
Sbjct: 348 -RNAVKQGKACRVVIRNYRKDGSLFWNELNISPIFDNMGKVTHFIGIQ 394
>gi|448301844|ref|ZP_21491834.1| HTR-like protein [Natronorubrum tibetense GA33]
gi|445583468|gb|ELY37799.1| HTR-like protein [Natronorubrum tibetense GA33]
Length = 563
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 38 DTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQY 97
+T+LS++ + P ++ + D PIIYVN F TGY DEVLGRNCRFLQ
Sbjct: 97 ETQLSVRERAM--NEAPVGIILTNPHAEDNPIIYVNDKFTDLTGYEKDEVLGRNCRFLQ- 153
Query: 98 RDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
R P V ++R +E EL N++ DGT N +R+AP+ DD+G +
Sbjct: 154 --GEQTREEP------VDKLRTAVENREPVTVELRNYRADGTKFWNHVRIAPLFDDNGDI 205
Query: 158 THIIGIQ 164
+ +G Q
Sbjct: 206 EYFVGFQ 212
>gi|393212721|gb|EJC98220.1| hypothetical protein FOMMEDRAFT_31982 [Fomitiporia mediterranea
MF3/22]
Length = 978
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQY---RDPRAQRRHPLVDPV 112
SF+VAD PD P++Y + F TGY E+LG+NCRFLQ R R++ R
Sbjct: 330 SFIVADVRQPDAPVVYASPTFCELTGYSEGEILGQNCRFLQAPGGRVARSEIRR-FTSSD 388
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPI--RDDDGTVTHIIGIQIFSEAK 170
V ++R L++ E Q L+N++KD P VNR+ + PI DD + +G Q
Sbjct: 389 AVRDMRFALDKDREVQVSLVNYRKDEQPFVNRVSIVPIPATDDGSEIAFHVGFQ------ 442
Query: 171 IDLN 174
+DLN
Sbjct: 443 VDLN 446
>gi|403341074|gb|EJY69834.1| Serine/threonine-protein phosphatase [Oxytricha trifallax]
Length = 861
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 131/268 (48%), Gaps = 35/268 (13%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGC----GRQGLLNDVFVLDLDAKQPTWIEVS-GGAPPLP 409
P R+GHT++ ++ + +V+FGG G+ + + ++ ++ K TW +++ G PP P
Sbjct: 81 PQARFGHTITLVSKTKVVLFGGATGDTGKYSMTGETYLFNILTK--TWQKLNVKGVPPSP 138
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDT-YLLDLTT--DKPMWREIPTSWSPPS-RLG 465
R+ HSS +E ++VV GG T G L SD YLLD+ D W +P S P R G
Sbjct: 139 RAAHSSTNVEQMQMVVYGGATGGGSLASDDLYLLDMRNGDDMAQWMIVPVVGSTPGRRYG 198
Query: 466 HSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVV 525
H++ ++ + +L+FGG +G + + + + + W +L+C G ++
Sbjct: 199 HTI-IFSKPHLLVFGG--NTGQEAVN--DVWCLSVEKAPFSWIKLDC------GKEN--- 244
Query: 526 PPPRLDHVA----VSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVP----G 577
P R+ H A G +++FGG + S + + L + W + P G
Sbjct: 245 PAVRVYHSAALCQTGSATGMMVVFGGRTSDQSSLNDSWGLRRHRDG-RWDWVKAPYKATG 303
Query: 578 QPPKFAWGHSTCVVGGTRVLVLGGHTGE 605
+ P + HST + G ++V+GG T +
Sbjct: 304 EQPTPRYQHSTLFL-GPLMMVIGGRTNQ 330
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 15/152 (9%)
Query: 460 PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVG 519
P +R GH++++ +TKV++FGG +GE+Y ++ + W++L
Sbjct: 81 PQARFGHTITLVSKTKVVLFGGATGDTGKYSMTGETYLFNILTKT--WQKLNV------- 131
Query: 520 SQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQ-LFLLD--PSEEKPSWRILNVP 576
V P PR H + ++ +++++GG+ G S L+LLD ++ W I+ V
Sbjct: 132 --KGVPPSPRAAHSSTNVEQMQMVVYGGATGGGSLASDDLYLLDMRNGDDMAQWMIVPVV 189
Query: 577 GQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWV 608
G P +GH T + +LV GG+TG+E V
Sbjct: 190 GSTPGRRYGH-TIIFSKPHLLVFGGNTGQEAV 220
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 15/211 (7%)
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGN-RLVLFGGE-GVNMQPMDDTFVLNLDAAN--PEWR 347
W+K V+G R S+ ++V++GG G DD ++L++ + +W
Sbjct: 125 TWQKLNVKGVPPSPRAAHSSTNVEQMQMVVYGGATGGGSLASDDLYLLDMRNGDDMAQWM 184
Query: 348 RVSVKSSPPGR-WGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS-GGA 405
V V S PGR +GHT+ + L+VFGG Q +NDV+ L ++ +WI++ G
Sbjct: 185 IVPVVGSTPGRRYGHTI-IFSKPHLLVFGGNTGQEAVNDVWCLSVEKAPFSWIKLDCGKE 243
Query: 406 PPLPRSWHSSCIIE-GSK---LVVSGGCTDAGVLLSDTYLLDLTTD-KPMWREIP---TS 457
P R +HS+ + + GS +VV GG T L+D++ L D + W + P T
Sbjct: 244 NPAVRVYHSAALCQTGSATGMMVVFGGRTSDQSSLNDSWGLRRHRDGRWDWVKAPYKATG 303
Query: 458 WSPPSRLGHSLSVYGRTKVLMFGGLAKSGHL 488
P R HS G +++ G + G +
Sbjct: 304 EQPTPRYQHSTLFLGPLMMVIGGRTNQVGEI 334
>gi|448658338|ref|ZP_21682771.1| PAS/PAC sensor signal transduction histidine kinase [Haloarcula
californiae ATCC 33799]
gi|445761732|gb|EMA12978.1| PAS/PAC sensor signal transduction histidine kinase [Haloarcula
californiae ATCC 33799]
Length = 833
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P +ADA PD P++Y N F TGY+ + V+G+N RFLQ + DP
Sbjct: 265 PVGITIADANQPDNPLVYANDKFSELTGYQEENVVGQNSRFLQGEN---------TDPSP 315
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+R ++ EL N++KDGT NR+ +AP+ D G VT+ IG Q
Sbjct: 316 VAEMREAIDAEEPVTVELQNYRKDGTEFWNRVTIAPVTDGTGAVTNYIGFQ 366
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
DPD I YVN FE TGY +DEV+G+ R L+ + + L +
Sbjct: 397 DPDGTITYVNPAFERATGYESDEVVGQTPRILKSGEMSNEYYERL---------WSTISS 447
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G ++ E+ + +K G +AP+ DD+G + + IQ
Sbjct: 448 GDVWEEEIQDQRKSGEVYYAHQTIAPLTDDNGEIEAYVAIQ 488
>gi|83773165|dbj|BAE63292.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 206
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
+FV+ D D PIIYV++ FE TGY E++G+NCRFLQ + Q+ + VD
Sbjct: 76 AFVLCDITQNDHPIIYVSEAFERLTGYTEQEIVGQNCRFLQGPEGVVQKGMKRTFVDDET 135
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
S +R +E+ E Q L+N++K G P +N + + PIR +G Q+
Sbjct: 136 TSRLRSTIEDRTEIQASLINYRKGGQPFMNLITMIPIRWSSQEYRFYVGFQV 187
>gi|383620603|ref|ZP_09947009.1| bacterio-opsin activator [Halobiforma lacisalsi AJ5]
gi|448697960|ref|ZP_21698838.1| bacterio-opsin activator [Halobiforma lacisalsi AJ5]
gi|445781326|gb|EMA32187.1| bacterio-opsin activator [Halobiforma lacisalsi AJ5]
Length = 628
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 36 GDDTELSLKPGLL---FYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNC 92
GDD E ++ ++ P ++D D P++Y+N ++ TGY D+V+GRNC
Sbjct: 115 GDDVESTVSDRVIKDRAIDEAPVGISISDPDREDNPLVYINDAYQEITGYSYDDVVGRNC 174
Query: 93 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRD 152
R LQ D + ++ + + ++E E+ N++KDGT N + +AP+R+
Sbjct: 175 RLLQGEDSSEE---------AIARMAKAVDEDYPVTVEIKNYRKDGTEFWNEVTIAPVRN 225
Query: 153 DDGTVTHIIGIQ 164
DDG VT+ +G Q
Sbjct: 226 DDGEVTNYVGFQ 237
>gi|388854398|emb|CCF51982.1| related to Tip elongation aberrant protein 1 [Ustilago hordei]
Length = 792
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 15/197 (7%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLF-GGEGVNMQPMDDTFVLNLDAANPEWR 347
E +CW K V G + P+R SA RL +F GG+G + +D +V D + W
Sbjct: 522 ETMCWSKPKVTGDMPPARRAHSATMVNKRLFVFAGGDGPHY--FNDLYV--FDTVSLRWS 577
Query: 348 RVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDL-DAKQPTWIEVS-GG 404
+ V + P R HT + G L+VFGG G LNDV LD+ D + W ++ GG
Sbjct: 578 KPEVGGTAPSPRRAHTCNYYEGQ-LIVFGGGNGVGALNDVHTLDVSDLSRLEWRKMDCGG 636
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
P+ R +H+S +++G KL+V GG +D + +D ++L L D W ++ T +RL
Sbjct: 637 KVPIGRGYHTSNLVDG-KLIVIGG-SDGHMSFNDIHILRL--DTQTWYQVKTD-EIHNRL 691
Query: 465 GHSLSVYGRTKVLMFGG 481
GH+ + G + + +FGG
Sbjct: 692 GHTATQVG-SYLFIFGG 707
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 128/280 (45%), Gaps = 32/280 (11%)
Query: 346 WRRVSVKSSPPGR--WGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
W + V S P R HT ++L L +FGGC +G D++ D + + +V+G
Sbjct: 475 WSKAPVHGSVPRRSFRAHT-ANLCDEVLWLFGGCDNRGCFRDLWCFDTETMCWSKPKVTG 533
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS- 462
PP R+ HS+ ++ V +GG D +D Y+ D + + W + + PS
Sbjct: 534 DMPPARRA-HSATMVNKRLFVFAGG--DGPHYFNDLYVFDTVSLR--WSKPEVGGTAPSP 588
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD-EEPQWKQLECNAFTGVGSQ 521
R H+ + Y ++++FGG G L + +T+D+ D +W++++C +G
Sbjct: 589 RRAHTCNYY-EGQLIVFGGGNGVGAL----NDVHTLDVSDLSRLEWRKMDCGGKVPIG-- 641
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
R H + ++ G++I+ GGS G S + + +L + +W V
Sbjct: 642 -------RGYHTS-NLVDGKLIVIGGS-DGHMSFNDIHIL--RLDTQTW--YQVKTDEIH 688
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
GH+ V G+ + + GGH + + +EL L L + Q
Sbjct: 689 NRLGHTATQV-GSYLFIFGGHDSKTYT-SELLTLNLVNLQ 726
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
+++ L + WRK G V R ++ +L++ GG +M +D +L LD
Sbjct: 620 DVSDLSRLEWRKMDCGGKVPIGRGYHTSNLVDGKLIVIGGSDGHMS-FNDIHILRLDTQT 678
Query: 344 PEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
W +V R GHT + + GS+L +FGG + +++ L+L Q +V G
Sbjct: 679 --WYQVKTDEI-HNRLGHTATQV-GSYLFIFGGHDSKTYTSELLTLNLVNLQWEPRKVCG 734
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDL 444
P R +H + + + S+L V GG D + D + LDL
Sbjct: 735 KK-PQGRGYHQAWLRD-SRLFVHGGF-DGKDIFDDLHFLDL 772
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 98/227 (43%), Gaps = 25/227 (11%)
Query: 293 WRKFTVRG-AVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNL-DAANPEWRRVS 350
W K V G A P R + G +V GG GV ++D L++ D + EWR++
Sbjct: 576 WSKPEVGGTAPSPRRAHTCNYYEGQLIVFGGGNGVGA--LNDVHTLDVSDLSRLEWRKMD 633
Query: 351 VKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLP 409
P GR HT + ++G L+V GG ND+ +L LD + TW +V
Sbjct: 634 CGGKVPIGRGYHTSNLVDGK-LIVIGGSDGHMSFNDIHILRLDTQ--TWYQVKTDE-IHN 689
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT----------DKPMWREIPTSWS 459
R H++ + GS L + GG D+ S+ L+L KP R +W
Sbjct: 690 RLGHTATQV-GSYLFIFGG-HDSKTYTSELLTLNLVNLQWEPRKVCGKKPQGRGYHQAWL 747
Query: 460 PPSRLGHSLSVYGRT--KVLMFGGLAKSGHLRLRSGESYTIDLGDEE 504
SRL G+ L F LA +L + S++++L DEE
Sbjct: 748 RDSRLFVHGGFDGKDIFDDLHFLDLAACAYLPQIT--SFSVELDDEE 792
>gi|82491931|gb|ABB77846.1| MADA [Phycomyces blakesleeanus]
Length = 660
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR----AQRRHPLVDP 111
SF+V DA D PI+Y + FE TGY+ E+LGRNCRFLQ D R ++R+H D
Sbjct: 107 SFLVTDARQYDHPIVYCSPTFEHLTGYKGSEILGRNCRFLQAPDGRVTSGSRRQH--TDN 164
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++ + + E Q ++N++K G VN + + PI ++ V +G+Q+
Sbjct: 165 QAVYHLKAQMLQSNEHQASIINYRKGGQAFVNLITVIPICNEFNEVAFFVGLQV 218
>gi|448407165|ref|ZP_21573592.1| bacterio-opsin activator [Halosimplex carlsbadense 2-9-1]
gi|445676378|gb|ELZ28901.1| bacterio-opsin activator [Halosimplex carlsbadense 2-9-1]
Length = 652
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
P +AD D P+IYVN FE GY VLGRNC F+Q + +
Sbjct: 139 APVGITIADGKRRDTPLIYVNDAFEQLAGYDEANVLGRNCNFMQGDESEEAK-------- 190
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+ ++EG EL+N+ DG NR+ +API +DGTVTH +G Q
Sbjct: 191 -IAEMAAAIDEGDPVSVELVNYTDDGEQFWNRVHIAPIHGEDGTVTHYVGFQ 241
>gi|147819853|emb|CAN71813.1| hypothetical protein VITISV_023418 [Vitis vinifera]
Length = 672
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 150/353 (42%), Gaps = 45/353 (12%)
Query: 286 TTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE 345
T + W V G R SAC + + +FGG + D VLNLD
Sbjct: 8 TAKKKAMWLYPKVLGFNPSERWGHSACYSHGLVYVFGGCCGGLH-FCDVLVLNLDTM--A 64
Query: 346 WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGA 405
W + PG + + G ++VFGG +ND+ +LDL +K+ T E GA
Sbjct: 65 WDTLVTTGQGPGPRDSHSAVILGQRMIVFGGTNGSKKVNDLHILDLGSKEWTRPECR-GA 123
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGV-LLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
PP PR H++ ++ KLV+ GG + L+D ++LDL T + E+ +P R
Sbjct: 124 PPSPRESHTATLVGDEKLVIFGGSGEGEANYLNDFHVLDLKTMRWTSPEVKGD-TPAPRD 182
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESY--TIDLGDEEP-QWKQLECNAFTGVGSQ 521
HS G K++++GG G+ Y ID+ D + W +L GS
Sbjct: 183 SHSAVAIG-NKLIVYGG---------DCGDRYHGDIDILDMDTLTWSRLSVQ-----GSS 227
Query: 522 SAVVPPPRLDHVAVSMPC-------------GRIIIFGGSIAGLHSPSQLFLLDPSEEKP 568
V R H AVS+ + I GG + H + +++LD
Sbjct: 228 PGV----RAGHAAVSIGTKASQTLGKKNQVFDEVYIIGG-VGDKHYYNDVWVLDVI--TC 280
Query: 569 SWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
W L + GQ P+ + H T +V + + + GG +E LNEL L L S+
Sbjct: 281 LWNQLEIRGQQPQGRFSH-TAIVTDSDIAIYGGCGEDERPLNELLVLQLGSEH 332
>gi|75906870|ref|YP_321166.1| multi-sensor signal transduction histidine kinase [Anabaena
variabilis ATCC 29413]
gi|75700595|gb|ABA20271.1| multi-sensor signal transduction histidine kinase [Anabaena
variabilis ATCC 29413]
Length = 1741
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
++ADA P+ PIIYVN FE TGY +DEV+G+N R Q D +D + + E
Sbjct: 1265 IIIADASTPNRPIIYVNPAFERMTGYSSDEVIGQNFRLFQSAD---------IDQLGLRE 1315
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ ++ G L N++KDG+ L N L ++P+ D G +TH IGIQ
Sbjct: 1316 LSTAMQAGKACTVVLRNYRKDGSLLWNELNISPVYDQTGQLTHYIGIQ 1363
>gi|222106570|ref|YP_002547361.1| sensory box histidine kinase [Agrobacterium vitis S4]
gi|221737749|gb|ACM38645.1| sensory box histidine kinase [Agrobacterium vitis S4]
Length = 411
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 29/214 (13%)
Query: 42 SLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR 101
S P + T ++ D D PII+ N F TGY +D+++G+NCRFLQ
Sbjct: 66 SEDPFAAAFKATRMPMIITDPRQADNPIIFANNAFCELTGYASDDLIGKNCRFLQ----- 120
Query: 102 AQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHII 161
P DP V +IR+ +E + +LN++KDGT N L ++P+RD G V +
Sbjct: 121 ----GPDSDPKAVLQIRKAIEAERDVSVNILNYRKDGTTFWNALFISPVRDIQGEVIYFF 176
Query: 162 GIQI-FSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQH-QDICGILQLSDEV 219
Q+ F++ K + Q A S + ++Q QD+ L+ +
Sbjct: 177 ASQLDFTDVK----------------SKEVQLASAKSQAEAAVAQRTQDLVDALE-AKTT 219
Query: 220 LAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVR 253
L H + R+ ++ +I S+ + ++T+++ VR
Sbjct: 220 LVHEVDHRV-KNNLLTIASIVKLQARMTRDDTVR 252
>gi|242207929|ref|XP_002469817.1| hypothetical blue light photoreceptor [Postia placenta Mad-698-R]
gi|220731237|gb|EED85084.1| hypothetical blue light photoreceptor [Postia placenta Mad-698-R]
Length = 542
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR---RHPLVDPV 112
+FVV D D PI+Y + F TGY EVLGRNCRFLQ D R QR R P
Sbjct: 202 AFVVVDVRRFDAPIVYASPTFCSLTGYPEHEVLGRNCRFLQAPDGRVQRGDVRR-FTAPD 260
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR--DDDGTVTHIIGIQI 165
V+ +RRC +G E Q ++N++K G +N + + P+ D +V + +G Q+
Sbjct: 261 AVAHLRRCTSQGKECQTSMINYRKGGAAFINLVTVIPVPPDSDHDSVAYHVGFQV 315
>gi|391868609|gb|EIT77819.1| hypothetical protein Ao3042_05945 [Aspergillus oryzae 3.042]
Length = 206
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
+FV+ D D PIIYV++ FE TGY E++G+NCRFLQ + Q+ + VD
Sbjct: 76 AFVLCDITQNDHPIIYVSEAFERLTGYTEQEIVGQNCRFLQGPEGVVQKGMKRTFVDDET 135
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
S +R +E+ E Q L+N++K G P +N + + PIR +G Q+
Sbjct: 136 TSRLRSTIEDRTEIQASLINYRKGGQPFMNLITMIPIRWSSQEYRFYVGFQV 187
>gi|149186049|ref|ZP_01864363.1| sensory box histidine kinase [Erythrobacter sp. SD-21]
gi|148830080|gb|EDL48517.1| sensory box histidine kinase [Erythrobacter sp. SD-21]
Length = 359
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 46 GLLF---YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRA 102
GLLF T + + D D PI++ N+ FE TGYR +++LGRNCRFLQ
Sbjct: 36 GLLFEQAMAQTRMAVCLTDPHQQDDPIVFCNEAFEQLTGYRREDILGRNCRFLQ------ 89
Query: 103 QRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIG 162
P D +++IR + ELLN++KDG+ N L L PI D +G +T+ G
Sbjct: 90 ---GPDTDQRQIAKIREAIAAEEVVVVELLNYRKDGSTFYNTLHLGPIYDAEGRLTYFFG 146
Query: 163 IQ 164
Q
Sbjct: 147 SQ 148
>gi|323448496|gb|EGB04394.1| hypothetical protein AURANDRAFT_9009 [Aureococcus anophagefferens]
Length = 104
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ D PD PI++ + F TGY+ ++VLGRNCRFLQ P D V
Sbjct: 2 SFVITDPTLPDNPIVFASGGFLSLTGYKLEQVLGRNCRFLQ---------GPRTDARAVG 52
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ G + Q LLN+K D T N +A +RDD G V + +G+QI
Sbjct: 53 KIREAIKHGTDVQICLLNYKIDSTTFWNHFFIAALRDDAGDVVNFLGVQI 102
>gi|422641750|ref|ZP_16705172.1| histidine kinase, partial [Pseudomonas syringae Cit 7]
gi|330954136|gb|EGH54396.1| histidine kinase [Pseudomonas syringae Cit 7]
Length = 266
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 30 TTRMPMIVTDPNRPDNPIIFANRAFLEMTGYASEEIIGSNCRFLQ---------GPDTDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV IR ++E ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AVVKSIRDAIDERVDISTEILNYRKDGSTFWNALFISPVYNDAGDLIYFFASQL 134
>gi|17228724|ref|NP_485272.1| two-component sensor histidine kinase [Nostoc sp. PCC 7120]
gi|17130576|dbj|BAB73186.1| two-component sensor histidine kinase [Nostoc sp. PCC 7120]
Length = 1749
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
++ADA P+ PIIYVN FE TGY +DEV+G+N R Q D +D + + E
Sbjct: 1265 IIIADASTPNRPIIYVNPAFERMTGYSSDEVIGQNFRLFQSAD---------IDQLGLRE 1315
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ ++ G L N++KDG+ L N L ++P+ D G +TH IGIQ
Sbjct: 1316 LSTAMQAGKACTVILRNYRKDGSLLWNELNISPVYDQTGQLTHYIGIQ 1363
>gi|393768622|ref|ZP_10357158.1| histidine kinase [Methylobacterium sp. GXF4]
gi|392725905|gb|EIZ83234.1| histidine kinase [Methylobacterium sp. GXF4]
Length = 524
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 12/133 (9%)
Query: 36 GDDTELSLKPGLLFYP---TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNC 92
G +++S + +F+ TT +V D PD PII+ N+ F TGY +E++GRNC
Sbjct: 5 GAASDVSDRTSDIFFAAVETTRMPMIVTDPRQPDNPIIFANRAFLAMTGYTPEELVGRNC 64
Query: 93 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRD 152
RFLQ P D V +IR + E EF E+LN++K+G+ N L ++P+ +
Sbjct: 65 RFLQ---------GPETDRETVDQIRTAIAEKREFATEILNYRKNGSSFWNALFVSPVYN 115
Query: 153 DDGTVTHIIGIQI 165
G + + G Q+
Sbjct: 116 SAGELVYFFGSQL 128
>gi|254414962|ref|ZP_05028725.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
gi|196178109|gb|EDX73110.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
Length = 1393
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
++ D PD P+IYVN FE TGY A EV+G NCRF Q P + V+++
Sbjct: 593 IITDPNQPDNPVIYVNPAFESMTGYTAKEVIGHNCRFWQ---------EPDYNQAGVTKL 643
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E E L N++KDG+ N L ++P+ D DG +TH +GIQ
Sbjct: 644 ATAIQEQRECHVILQNYRKDGSTFWNELYVSPVFDGDGYLTHFVGIQ 690
>gi|390362392|ref|XP_793170.3| PREDICTED: uncharacterized protein LOC588391 [Strongylocentrotus
purpuratus]
Length = 636
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 300 GAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE----WRRVSVKSSP 355
V P+R SA L +FGG N P D ++ NPE ++ V++ + P
Sbjct: 415 AGVAPTRAYHSATFFRKELYVFGGVYPNPDPQPDGCSNDVVIFNPESESWYKPVTMGTKP 474
Query: 356 PGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSS 415
R GH+ ++L G LV+FGG ND+ VLDL + T ++ G PP PRSWH+S
Sbjct: 475 KARSGHS-ATLLGDQLVIFGGWDAPVCYNDLHVLDLCLMEFTSPKMMG-TPPSPRSWHAS 532
Query: 416 CIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPP--SRLGHSLSVY 471
+ G+K+++ GG + LSDT++ L D W E+ S P R GH+++ Y
Sbjct: 533 IALPGNKVLIHGGY-NGNEALSDTFIFHL--DTFTWSEVKLHSSVPIGIRAGHAITSY 587
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 45/260 (17%)
Query: 305 SRCNFSACAAGNR-LVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSP---PGRWG 360
SR + C GNR +L GG+G + Q + + L+ +W ++++S P R G
Sbjct: 314 SRWGHTLCDVGNRNCLLIGGQG-HRQTISKDAIWMLNTETGDWSVPAIETSSDKFPSRMG 372
Query: 361 HTLS---SLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCI 417
HT + LN + VFGG ND+ +LDL + + +E +G AP R++HS+
Sbjct: 373 HTATFDPELNS--VFVFGGSKNLRWFNDMHILDLGTMKWSLVEAAGVAP--TRAYHSATF 428
Query: 418 IEGSKLVVSG----------GCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHS 467
V G GC++ V+ + + ++ + P +R GHS
Sbjct: 429 FRKELYVFGGVYPNPDPQPDGCSNDVVIFN-------PESESWYKPVTMGTKPKARSGHS 481
Query: 468 LSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPP 527
++ G ++++FGG + + + +DL +E + +G+ P
Sbjct: 482 ATLLGD-QLVIFGGWDAP----VCYNDLHVLDLC-------LMEFTSPKMMGTP----PS 525
Query: 528 PRLDHVAVSMPCGRIIIFGG 547
PR H ++++P +++I GG
Sbjct: 526 PRSWHASIALPGNKVLIHGG 545
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 23/265 (8%)
Query: 347 RRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTW----IEVS 402
R+ + P RWGHTL + ++ GG G + ++ + L+ + W IE S
Sbjct: 304 RKKENDAEPSSRWGHTLCDVGNRNCLLIGGQGHRQTISKDAIWMLNTETGDWSVPAIETS 363
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS 462
P ++ E + + V GG + +D ++LDL T K W + + P+
Sbjct: 364 SDKFPSRMGHTATFDPELNSVFVFGGSKNLR-WFNDMHILDLGTMK--WSLVEAAGVAPT 420
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQS 522
R HS + + R ++ +FGG+ + + + + E W + +G++
Sbjct: 421 RAYHSATFF-RKELYVFGGVYPNPDPQPDGCSNDVVIFNPESESWYKP-----VTMGTK- 473
Query: 523 AVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPS-EEKPSWRILNVPGQPPK 581
P R H A + +++IFGG A + + L +LD E S +++ P P
Sbjct: 474 ---PKARSGHSATLL-GDQLVIFGGWDAPV-CYNDLHVLDLCLMEFTSPKMMGTPPSP-- 526
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEE 606
+W H++ + G +VL+ GG+ G E
Sbjct: 527 RSW-HASIALPGNKVLIHGGYNGNE 550
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
E+ W K G +R SA G++LV+FGG + +D VL+L E+
Sbjct: 460 ESESWYKPVTMGTKPKARSGHSATLLGDQLVIFGGWDAPVC-YNDLHVLDLCLM--EFTS 516
Query: 349 VSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV 401
+ +PP R H +L G+ +++ GG L+D F+ LD TW EV
Sbjct: 517 PKMMGTPPSPRSWHASIALPGNKVLIHGGYNGNEALSDTFIFHLDTF--TWSEV 568
>gi|292654797|ref|YP_003534694.1| PAS-PAC-PAC sensing histidine kinase [Haloferax volcanii DS2]
gi|448293062|ref|ZP_21483306.1| PAS-PAC-PAC sensing histidine kinase [Haloferax volcanii DS2]
gi|291370941|gb|ADE03168.1| pas-pac-pac sensing his kinase [Haloferax volcanii DS2]
gi|445571562|gb|ELY26109.1| PAS-PAC-PAC sensing histidine kinase [Haloferax volcanii DS2]
Length = 858
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D D P+ YVN FE TGY EV+GRNCRFLQ D DP V + ++
Sbjct: 163 DDDQPLTYVNDAFEEMTGYDRSEVIGRNCRFLQGDD---------TDPEAVETLHEAVDA 213
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G L N++KDGTP N L+++P+ DDG +TH +G Q
Sbjct: 214 GESAAVGLTNYRKDGTPFWNDLKISPVY-DDGELTHFVGFQ 253
>gi|448320158|ref|ZP_21509646.1| HTR-like protein [Natronococcus amylolyticus DSM 10524]
gi|445606564|gb|ELY60468.1| HTR-like protein [Natronococcus amylolyticus DSM 10524]
Length = 634
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 72/140 (51%), Gaps = 16/140 (11%)
Query: 29 EGGGGGGGDDT----ELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRA 84
E G GGG DD LSL+ + P V+ D D PI Y N+ F TGY
Sbjct: 7 EEGAGGGSDDEGVREALSLREQAI--DEAPVGIVITDPSRADNPITYANEGFVRVTGYAR 64
Query: 85 DEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNR 144
E+LGRNCRFLQ +R DP V +R ++ G ELLN+++DG P NR
Sbjct: 65 SEILGRNCRFLQ-----GER----TDPEPVERMRAAIDAGESVTVELLNYRRDGDPFWNR 115
Query: 145 LRLAPIRDDDGTVTHIIGIQ 164
+ +AP+ D + V + +GIQ
Sbjct: 116 VTIAPLFDGN-EVANFVGIQ 134
>gi|380512305|ref|ZP_09855712.1| histidine kinase [Xanthomonas sacchari NCPPB 4393]
Length = 544
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 39 TELSLKPGLLFYP---TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFL 95
T++S + +F+ TT +V D PD PII+VN+ F TGY DE++G NCRFL
Sbjct: 22 TDMSNQRSDIFFAAVQTTRMPMIVTDPRQPDNPIIFVNRAFLEMTGYSRDELIGNNCRFL 81
Query: 96 QYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDG 155
Q P D V +R + E E+LN++KDG+ N L ++P+ DD G
Sbjct: 82 Q---------GPDTDRETVRNVREAIATHDEVAVEILNYRKDGSSFWNALYISPVYDDRG 132
Query: 156 TVTHIIGIQI 165
+ + G Q+
Sbjct: 133 ELVYFFGSQL 142
>gi|71018379|ref|XP_759420.1| hypothetical protein UM03273.1 [Ustilago maydis 521]
gi|46099027|gb|EAK84260.1| hypothetical protein UM03273.1 [Ustilago maydis 521]
Length = 767
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 15/197 (7%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLF-GGEGVNMQPMDDTFVLNLDAANPEWR 347
E +CW K V G + P+R SA RL +F GG+G + +D ++ D + W
Sbjct: 497 ETMCWSKPKVTGDIPPARRAHSATMVNKRLYVFAGGDGPHY--FNDLYI--FDTVSLRWT 552
Query: 348 RVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDL-DAKQPTWIEVS-GG 404
+ V + P R HT + G L+VFGG G LNDV LD+ D + W +V G
Sbjct: 553 KPEVGGTAPSPRRAHTCNYYEGQ-LIVFGGGNGVGALNDVHTLDVNDLSRLEWRKVQCSG 611
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
P+ R +H+S +++G KL+V GG +D + +D ++L L D W ++ T +RL
Sbjct: 612 KVPIGRGYHTSNLVDG-KLIVIGG-SDGHMSFNDIHILRL--DTRTWYQVKTD-EVHNRL 666
Query: 465 GHSLSVYGRTKVLMFGG 481
GH+ + G + + +FGG
Sbjct: 667 GHTATQVG-SYLFIFGG 682
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 32/280 (11%)
Query: 346 WRRVSVKSSPPGRW--GHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
W + V S P R HT ++L L +FGGC +G D++ D + + +V+G
Sbjct: 450 WSKAPVHGSIPRRSFRAHT-ANLCDEVLWLFGGCDNRGCFRDLWCFDTETMCWSKPKVTG 508
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS- 462
PP R+ HS+ ++ V +GG D +D Y+ D + + W + + PS
Sbjct: 509 DIPPARRA-HSATMVNKRLYVFAGG--DGPHYFNDLYIFDTVSLR--WTKPEVGGTAPSP 563
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD-EEPQWKQLECNAFTGVGSQ 521
R H+ + Y ++++FGG G L + +T+D+ D +W++++C
Sbjct: 564 RRAHTCNYY-EGQLIVFGGGNGVGAL----NDVHTLDVNDLSRLEWRKVQC--------- 609
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
S VP R H + ++ G++I+ GGS G S + + +L + +W V
Sbjct: 610 SGKVPIGRGYHTS-NLVDGKLIVIGGS-DGHMSFNDIHIL--RLDTRTW--YQVKTDEVH 663
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
GH+ V G+ + + GGH + + +EL L L + Q
Sbjct: 664 NRLGHTATQV-GSYLFIFGGHDSKTYT-SELLTLNLVNLQ 701
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ L + WRK G V R ++ +L++ GG +M +D +L LD
Sbjct: 595 DVNDLSRLEWRKVQCSGKVPIGRGYHTSNLVDGKLIVIGGSDGHMS-FNDIHILRLDTRT 653
Query: 344 PEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
W +V R GHT + + GS+L +FGG + +++ L+L Q +V G
Sbjct: 654 --WYQVKTDEV-HNRLGHTATQV-GSYLFIFGGHDSKTYTSELLTLNLVNLQWEPRKVCG 709
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDL 444
P R +H + + + S+L V GG D + D + LDL
Sbjct: 710 KR-PQGRGYHQAWLRD-SRLFVHGGF-DGKDIFDDLHFLDL 747
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 98/227 (43%), Gaps = 25/227 (11%)
Query: 293 WRKFTVRG-AVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNL-DAANPEWRRVS 350
W K V G A P R + G +V GG GV ++D L++ D + EWR+V
Sbjct: 551 WTKPEVGGTAPSPRRAHTCNYYEGQLIVFGGGNGVGA--LNDVHTLDVNDLSRLEWRKVQ 608
Query: 351 VKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLP 409
P GR HT + ++G L+V GG ND+ +L LD + TW +V
Sbjct: 609 CSGKVPIGRGYHTSNLVDGK-LIVIGGSDGHMSFNDIHILRLDTR--TWYQVKTDE-VHN 664
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT----------DKPMWREIPTSWS 459
R H++ + GS L + GG D+ S+ L+L +P R +W
Sbjct: 665 RLGHTATQV-GSYLFIFGG-HDSKTYTSELLTLNLVNLQWEPRKVCGKRPQGRGYHQAWL 722
Query: 460 PPSRLGHSLSVYGRTKV--LMFGGLAKSGHLRLRSGESYTIDLGDEE 504
SRL G+ L F LA +L + S++++L DEE
Sbjct: 723 RDSRLFVHGGFDGKDIFDDLHFLDLAACAYLPQIT--SFSVELDDEE 767
>gi|340506188|gb|EGR32384.1| kelch motif family protein, putative [Ichthyophthirius multifiliis]
Length = 502
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 132/272 (48%), Gaps = 31/272 (11%)
Query: 349 VSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQ-GLLNDVFVLDLDAKQPTWIEVSGGAPP 407
+S P R GH+L+++ G +L++FGGC +ND++ ++ Q + G PP
Sbjct: 74 ISDGDIPEQRGGHSLNAI-GQFLILFGGCYLDLKCMNDIYFYNI-VDQKWDLPKIFGDPP 131
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGH 466
PR HSS ++ G L + GG + G+ SD Y LDLT +W E+ PS R H
Sbjct: 132 SPRGGHSSTLV-GQYLYIFGGSSSLGI-FSDLYRLDLTN--RIWEELNLIGQKPSGRCNH 187
Query: 467 SLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVP 526
+ ++++FGG + G+ S E + +DL + +W++ N +P
Sbjct: 188 KAILDNNGRIVIFGGYTQQGY----SNEVFFLDLVN--LRWEKPFIN---------GELP 232
Query: 527 PPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEEKPSWRILNVP-GQPPKFAW 584
PR + + I IFGG SI G + ++ LD E WRI++ G P
Sbjct: 233 RPRENFSMNLIRDSYIWIFGGYSIGG--ENNDIWQLDV--ENMKWRIISQSFGTKPIERQ 288
Query: 585 GHSTCVVGGTRVLVLGG-HTGEEWVLNELHEL 615
GH T V+ G + ++GG + +E NE+++L
Sbjct: 289 GHQT-VLHGKYIYIIGGCNYKQEKCFNEVYQL 319
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 134/314 (42%), Gaps = 31/314 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W G + R S A G L+LFGG ++++ M+D + N+ + +W +
Sbjct: 70 WYPVISDGDIPEQRGGHSLNAIGQFLILFGGCYLDLKCMNDIYFYNI--VDQKWDLPKIF 127
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS-GGAPPLPRS 411
PP G S+L G +L +FGG G+ +D++ LDL + W E++ G P R
Sbjct: 128 GDPPSPRGGHSSTLVGQYLYIFGGSSSLGIFSDLYRLDLTNR--IWEELNLIGQKPSGRC 185
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT---DKPMWREIPTSWSPPSRLGHSL 468
H + + ++V+ GG T G ++ + LDL +KP P R S+
Sbjct: 186 NHKAILDNNGRIVIFGGYTQQG-YSNEVFFLDLVNLRWEKPF----INGELPRPRENFSM 240
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQS-AVVPP 527
++ + + +FGG + G + + + +D+ E +W+ + SQS P
Sbjct: 241 NLIRDSYIWIFGGYSIGGE----NNDIWQLDV--ENMKWR---------IISQSFGTKPI 285
Query: 528 PRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHS 587
R H V II G + ++++ L+ E +W L P Q +S
Sbjct: 286 ERQGHQTVLHGKYIYIIGGCNYKQEKCFNEVYQLNI--EDITWTNLEFPLQNILEQMDNS 343
Query: 588 TCVVGGTRVLVLGG 601
+ + G + V GG
Sbjct: 344 SISLMGADLYVFGG 357
>gi|299530043|ref|ZP_07043470.1| diguanylate cyclase with PAS/PAC sensor [Comamonas testosteroni
S44]
gi|298722023|gb|EFI62953.1| diguanylate cyclase with PAS/PAC sensor [Comamonas testosteroni
S44]
Length = 435
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 20/129 (15%)
Query: 69 IIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQ 128
I Y NK F TGY +E+LGR+ R LQ P D V+ ++R+CL EG FQ
Sbjct: 24 ISYCNKAFTSMTGYATEELLGRSPRILQ---------GPETDQQVIEQLRQCLAEGRFFQ 74
Query: 129 GELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI------QIFSEAKID-----LNHVS 177
G +N++KDGTP ++ +RD DG +TH + + Q+ SE + D LN +
Sbjct: 75 GSAVNYRKDGTPYHVSWNISAVRDVDGKITHFVSVQQDVTRQVESERQRDLMIQALNSAN 134
Query: 178 YPVFKENCN 186
PVF + N
Sbjct: 135 APVFITDRN 143
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D + +++VN FE TGY A EV+GR LQ AQ +E+R L
Sbjct: 141 DRNGYLVFVNHAFEHQTGYCAAEVMGRTPAMLQSGSHTAQ---------FYAELRDALVR 191
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
G F +N +KDG ++ +RD +TH + I
Sbjct: 192 GENFSRTFINRRKDGELYHAAQSISALRDASHRITHYVSI 231
>gi|188583707|ref|YP_001927152.1| signal transduction histidine kinase [Methylobacterium populi
BJ001]
gi|179347205|gb|ACB82617.1| signal transduction histidine kinase [Methylobacterium populi
BJ001]
Length = 366
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ +PT VV D D P+++ N F TGY +E+ G NCR LQ PL
Sbjct: 23 FEASPTPMVVTDPRRGDNPVVWANGAFLALTGYGREELYGHNCRMLQ---------GPLT 73
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
D V+ +R L G F+GELLN++KDGT N + + P+RD+ G V Q
Sbjct: 74 DEAVLQRMRVALAAGRPFEGELLNYRKDGTTFWNGMTINPVRDEAGEVVFFFSAQ 128
>gi|428180967|gb|EKX49832.1| hypothetical protein GUITHDRAFT_104227 [Guillardia theta CCMP2712]
Length = 593
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 149/347 (42%), Gaps = 66/347 (19%)
Query: 306 RCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSS 365
R S G +++FGG G + DT VL+L++ W V++SP R GH+ +
Sbjct: 160 RYQHSCTVVGKYMIVFGGHGTCF--LADTHVLDLESMT--WMSYDVENSPSPRAGHSATL 215
Query: 366 LNGSWLVVFGGCGRQGLLNDVFVLDLD---------AKQP--TWIEVSGGAP-PLPRSWH 413
L+ ++V GG G G N++ +L ++ +++P TW P P+ R H
Sbjct: 216 LDEEHVLVLGGHGGNGKFNEIHILQVEHGINTMLKKSERPILTWTRQEISGPYPINRGSH 275
Query: 414 SSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGR 473
+ +GS + + GG +D L D + LDL + W P P R+ S+ G
Sbjct: 276 CAAEHQGS-VYLFGGESDERECLDDFWRLDLA--QQTWERCPIEGCPSKRMDASMVRIG- 331
Query: 474 TKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHV 533
+++FGG L + + D+ D+ +W++ V P PR H
Sbjct: 332 NHLVVFGGANAQTQL----ADVFVFDVPDK--RWRK--------VSPIEGPPPEPRAGHA 377
Query: 534 AVSMPCGRIIIFGG-----SIAGLHSPSQLFLLDPS--EEKPSWRILNVPGQPPKFAWGH 586
V + GR+I+ GG + G+H +F L+ E K SW IL + + H
Sbjct: 378 CV-LHGGRMIVMGGGNGAQGLLGMH----IFDLETEDGEVKGSWSIL-------RAGYAH 425
Query: 587 ST-----------CVVGGTRVLVLGGHTGEEWVLNELHELCLASKQD 622
ST CV+ +++ + GG G LN++ L L D
Sbjct: 426 STSCLTVAREGAACVMHDSKLFLFGGFNGR--YLNDVMMLRLERDAD 470
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVS 350
+ W + + G +R + A + LFGGE + +DD + LD A W R
Sbjct: 257 LTWTRQEISGPYPINRGSHCAAEHQGSVYLFGGESDERECLDDFW--RLDLAQQTWERCP 314
Query: 351 VKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS--GGAPPL 408
++ P R ++ + G+ LVVFGG Q L DVFV D+ K+ W +VS G PP
Sbjct: 315 IEGCPSKRMDASMVRI-GNHLVVFGGANAQTQLADVFVFDVPDKR--WRKVSPIEGPPPE 371
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSP-PSRLGHS 467
PR+ H +C++ G +++V GG A LL ++ DL T+ E+ SWS + HS
Sbjct: 372 PRAGH-ACVLHGGRMIVMGGGNGAQGLLG-MHIFDLETEDG---EVKGSWSILRAGYAHS 426
Query: 468 LS-----------VYGRTKVLMFGGL 482
S V +K+ +FGG
Sbjct: 427 TSCLTVAREGAACVMHDSKLFLFGGF 452
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 107/263 (40%), Gaps = 60/263 (22%)
Query: 397 TWIE-VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP 455
TWI ++ G PP PR HS C + G ++V GG L+DT++LDL + W
Sbjct: 146 TWIGGLTTGTPPSPRYQHS-CTVVGKYMIVFGG--HGTCFLADTHVLDL--ESMTWMSYD 200
Query: 456 TSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLR--------------LRSGES------ 495
SP R GHS ++ VL+ GG +G L+ E
Sbjct: 201 VENSPSPRAGHSATLLDEEHVLVLGGHGGNGKFNEIHILQVEHGINTMLKKSERPILTWT 260
Query: 496 -------YTIDLGDEEPQWKQLECNAFTGVGSQSAVV---------------------PP 527
Y I+ G Q F G + + P
Sbjct: 261 RQEISGPYPINRGSHCAAEHQGSVYLFGGESDERECLDDFWRLDLAQQTWERCPIEGCPS 320
Query: 528 PRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILN-VPGQPPKFAWGH 586
R+D V + +++FGG+ A + +F+ D +++ WR ++ + G PP+ GH
Sbjct: 321 KRMDASMVRI-GNHLVVFGGANAQTQL-ADVFVFDVPDKR--WRKVSPIEGPPPEPRAGH 376
Query: 587 STCVVGGTRVLVLGGHTGEEWVL 609
+ CV+ G R++V+GG G + +L
Sbjct: 377 A-CVLHGGRMIVMGGGNGAQGLL 398
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 115/274 (41%), Gaps = 27/274 (9%)
Query: 288 LEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLD------- 340
LE++ W + V + P + + +++ GG G N + ++ +L ++
Sbjct: 191 LESMTWMSYDVENSPSPRAGHSATLLDEEHVLVLGGHGGNGK-FNEIHILQVEHGINTML 249
Query: 341 --AANP--EWRRVSVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQ 395
+ P W R + P R H + GS + G + L+D + LDL Q
Sbjct: 250 KKSERPILTWTRQEISGPYPINRGSHCAAEHQGSVYLFGGESDERECLDDFWRLDL--AQ 307
Query: 396 PTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI- 454
TW P R +S + G+ LVV GG +A L+D ++ D+ + WR++
Sbjct: 308 QTWERCPIEGCPSKRM-DASMVRIGNHLVVFGGA-NAQTQLADVFVFDVPDKR--WRKVS 363
Query: 455 PTSWSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECN 513
P PP R GH+ ++G ++M GG G L + + T D G+ + W L
Sbjct: 364 PIEGPPPEPRAGHACVLHGGRMIVMGGGNGAQGLLGMHIFDLETED-GEVKGSWSILRA- 421
Query: 514 AFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG 547
G ++ + R + A M ++ +FGG
Sbjct: 422 ---GYAHSTSCLTVAR-EGAACVMHDSKLFLFGG 451
>gi|289671649|ref|ZP_06492539.1| histidine kinase, partial [Pseudomonas syringae pv. syringae FF5]
Length = 259
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 30 TTRMPMIVTDPNRPDNPIIFANQAFLEMTGYASEEIIGSNCRFLQ---------GPDTDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V IR +EE ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AAVQSIRDAIEERVDISTEILNYRKDGSSFWNALFISPVYNDAGDLIYFFASQL 134
>gi|228481103|gb|ACQ42250.1| blue light photoreceptor [Fragaria x ananassa]
Length = 642
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P DP V
Sbjct: 123 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVK 173
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 174 KIREAIDNQTEVTVQLINYTKSGKKFWNVFHLQPMRDHKGEVQYFIGVQL 223
>gi|31324448|gb|AAP47230.1| GATA-factor [Emericella nidulans]
Length = 836
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP--LVDPVV 113
+FV+ D D PI+YV+ FE TGY E++GRNCRFLQ D + ++ P VD
Sbjct: 240 AFVLCDLTMEDSPIVYVSHAFERLTGYNEKEIVGRNCRFLQSPDAKVEKGEPRKFVDSHT 299
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR 151
VS +R ++ E Q ++N++K G P +N + + P+R
Sbjct: 300 VSRLRSAVDRRSEIQVSIINYRKGGQPFLNLVTMIPVR 337
>gi|259485576|tpe|CBF82714.1| TPA: GATA-factor [Source:UniProtKB/TrEMBL;Acc:Q7ZA36] [Aspergillus
nidulans FGSC A4]
Length = 837
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP--LVDPVV 113
+FV+ D D PI+YV+ FE TGY E++GRNCRFLQ D + ++ P VD
Sbjct: 240 AFVLCDLTMEDSPIVYVSHAFERLTGYNEKEIVGRNCRFLQSPDAKVEKGEPRKFVDSHT 299
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR 151
VS +R ++ E Q ++N++K G P +N + + P+R
Sbjct: 300 VSRLRSAVDRRSEIQVSIINYRKGGQPFLNLVTMIPVR 337
>gi|67525957|ref|XP_661040.1| hypothetical protein AN3436.2 [Aspergillus nidulans FGSC A4]
gi|40743704|gb|EAA62892.1| hypothetical protein AN3436.2 [Aspergillus nidulans FGSC A4]
Length = 836
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP--LVDPVV 113
+FV+ D D PI+YV+ FE TGY E++GRNCRFLQ D + ++ P VD
Sbjct: 240 AFVLCDLTMEDSPIVYVSHAFERLTGYNEKEIVGRNCRFLQSPDAKVEKGEPRKFVDSHT 299
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR 151
VS +R ++ E Q ++N++K G P +N + + P+R
Sbjct: 300 VSRLRSAVDRRSEIQVSIINYRKGGQPFLNLVTMIPVR 337
>gi|337278915|ref|YP_004618386.1| hybrid histidine kinase [Ramlibacter tataouinensis TTB310]
gi|334729991|gb|AEG92367.1| candidate histidine kinase, hybrid [Ramlibacter tataouinensis
TTB310]
Length = 537
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 46 GLLFYPT---TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRA 102
G LF+ T VV D PD PI +VN F TGY EVLGRNCR LQ
Sbjct: 30 GNLFFAAVEMTRMPMVVTDPHQPDNPIAFVNDAFLDMTGYEEAEVLGRNCRILQ------ 83
Query: 103 QRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIG 162
P D V+EIR L E ++LN+K DGTP N L + PI D G + H
Sbjct: 84 ---GPETDSETVAEIRTALAEQRAVAVDILNYKADGTPFWNALFIGPIFDSRGRLIH--- 137
Query: 163 IQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSG-GHSPLSQHQDICGILQLS 216
+S +++D+ Q+ + Q +G H + Q I G L+L+
Sbjct: 138 ---WSSSQMDITRRRMSEQSLRQAQKMEAIGQLTAGLAHDFNNLLQAISGNLELA 189
>gi|424072283|ref|ZP_17809704.1| sensor y box histidine kinase/response regulator [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|407997937|gb|EKG38366.1| sensor y box histidine kinase/response regulator [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
Length = 534
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 30 TTRMPMIVTDPNRPDNPIIFANQAFLEMTGYSSEEIIGSNCRFLQ---------GPDTDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V IR +EE ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AAVQSIRDAIEERVDISTEILNYRKDGSSFWNALFISPVYNDAGDLIYFFASQL 134
>gi|328876177|gb|EGG24540.1| RING zinc finger-containing protein [Dictyostelium fasciculatum]
Length = 827
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 93/163 (57%), Gaps = 15/163 (9%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGG-EGVNMQPMDDTFVLNLDAANPE 345
+E + W + T G++ PSR + S +GN++ +FGG +G + +D + L+LD
Sbjct: 180 NVETLTWDQPTCEGSIPPSRGSHSTFQSGNQMYIFGGFDG--KKYYNDLYCLDLDKL--I 235
Query: 346 WRRVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDA---KQPTWIE 400
W+++ K +PP R GH+ S+L G L+VFGGCG LND+ +L+L+ +QP
Sbjct: 236 WKKLEAKGTPPKPRSGHS-STLLGDKLIVFGGCGSDSNFLNDIHLLNLEDLRWEQPV--- 291
Query: 401 VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLD 443
++G P PR H++ + +K+ + G T +G LLSD ++
Sbjct: 292 ITGMENPYPRFRHTANSMGHNKVFIYAG-TGSGALLSDALAIE 333
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 130/300 (43%), Gaps = 48/300 (16%)
Query: 345 EWRRVSVKSSPPGRWGHTLSSLN-GSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS- 402
EW+R+ +P RWGH +LN G+ +VFGG G + ND+ + + + T +E S
Sbjct: 4 EWKRLGT-GAPEARWGHVCVTLNSGNQFLVFGGNGNKAY-NDIHLYNSLSNGWTKVEAST 61
Query: 403 --GGAPPLPRSWHSSCIIEGSKLV--VSGGCTDAG--VLL-----------SDTYLLDLT 445
G + P PR HS+ + + + ++GG T +LL SD +L
Sbjct: 62 HGGASTPQPRYGHSATLFGNNSALANLAGGATSNNQYILLYGGKHNNSKPFSDIQILQFV 121
Query: 446 T-------DKPMWREIPTSWSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYT 497
D+ W + SP R GH+ Y K+ +FGG S + S +
Sbjct: 122 VNTATGLPDRFKWLKSIHQKSPDGGRAGHTAISY-HDKLYVFGGHNSSKNKYYSSIVIFN 180
Query: 498 IDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQ 557
+ E W Q C +PP R H + ++ IFGG G +
Sbjct: 181 V----ETLTWDQPTC---------EGSIPPSRGSH-STFQSGNQMYIFGG-FDGKKYYND 225
Query: 558 LFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCL 617
L+ LD +K W+ L G PPK GHS+ ++G +++V GG + LN++H L L
Sbjct: 226 LYCLDL--DKLIWKKLEAKGTPPKPRSGHSSTLLGD-KLIVFGGCGSDSNFLNDIHLLNL 282
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 37/255 (14%)
Query: 311 ACAAGNRLVLFGGEGVNMQPMDDT----FVLNLDAANPE---W-RRVSVKSSPPGRWGHT 362
A + ++L+GG+ N +P D FV+N P+ W + + KS GR GHT
Sbjct: 92 ATSNNQYILLYGGKHNNSKPFSDIQILQFVVNTATGLPDRFKWLKSIHQKSPDGGRAGHT 151
Query: 363 LSSLNGSWLVVFGG--CGRQGLLNDVFVLDLDA---KQPTWIEVSGGAPPLPRSWHSSCI 417
S + L VFGG + + + + +++ QPT G PP R HS+
Sbjct: 152 AISYHDK-LYVFGGHNSSKNKYYSSIVIFNVETLTWDQPT---CEGSIPP-SRGSHST-F 205
Query: 418 IEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKV 476
G+++ + GG D +D Y LDL DK +W+++ +PP R GHS ++ G K+
Sbjct: 206 QSGNQMYIFGGF-DGKKYYNDLYCLDL--DKLIWKKLEAKGTPPKPRSGHSSTLLG-DKL 261
Query: 477 LMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVS 536
++FGG + + + ++L E+ +W+Q TG+ + P PR H A S
Sbjct: 262 IVFGGCGSDSNFL---NDIHLLNL--EDLRWEQP---VITGMEN-----PYPRFRHTANS 308
Query: 537 MPCGRIIIFGGSIAG 551
M ++ I+ G+ +G
Sbjct: 309 MGHNKVFIYAGTGSG 323
>gi|302187367|ref|ZP_07264040.1| histidine kinase [Pseudomonas syringae pv. syringae 642]
Length = 534
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT VV D PD PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 30 TTRMPMVVTDPNRPDNPIIFANRAFLEMTGYSSEEIIGINCRFLQ---------GPDTDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V IR +EE ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AAVQSIRDAIEERVDISTEILNYRKDGSSFWNALFISPVYNDAGELIYFFASQL 134
>gi|434403453|ref|YP_007146338.1| PAS domain S-box [Cylindrospermum stagnale PCC 7417]
gi|428257708|gb|AFZ23658.1| PAS domain S-box [Cylindrospermum stagnale PCC 7417]
Length = 2260
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ D PD P+IYVN FE TGY A EV+G+NCR LQ D + ++
Sbjct: 1770 IVITDVTIPDKPLIYVNSAFERMTGYTAAEVIGQNCRLLQGAD---------ISQPELTY 1820
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R ++ G + L N++KDG+ N L ++P+ D DG +TH IGIQ
Sbjct: 1821 LRAAVQSGKDCTVILRNYRKDGSLFWNELNISPVYDTDGELTHYIGIQ 1868
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 15/114 (13%)
Query: 56 SFVVADAFDPDFP----IIYVNKVFEIFTGYRADEVLGRNCRFLQ-YRDPRAQRRHPLVD 110
+ ++ +A P+ P I+YVN F +GY EV+G+ R LQ + R Q
Sbjct: 162 AIIITEAVIPEEPFGLRILYVNAAFTRMSGYAVGEVMGKTPRILQGEQTSRTQ------- 214
Query: 111 PVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+++IR L+ G+ + EL+N+ K+G+ + + PI+D G +TH + +Q
Sbjct: 215 ---LAKIRAALQAGLPIRTELINYHKNGSTYWVEINVVPIKDQQGKITHFVAVQ 265
>gi|443897928|dbj|GAC75267.1| hypothetical protein PANT_14d00114 [Pseudozyma antarctica T-34]
Length = 1091
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR----DPRAQRRHPLVDP 111
SF ++DA P+ P+IY ++ F TGY E+LG+NCRFLQ + +R+H D
Sbjct: 420 SFAISDARHPEQPLIYASETFCHLTGYTLHEILGKNCRFLQTPGAALEAGTERQH--TDN 477
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQI 165
V ++R L E Q L+N++KDG+P +N + + P+ D G V ++G Q+
Sbjct: 478 RAVEHLKRHLTGFRECQASLINYRKDGSPFINLVTVVPVSWSDPGQVDFLVGFQV 532
>gi|334184721|ref|NP_001189691.1| galactose oxidase/kelch repeat-containing protein [Arabidopsis
thaliana]
gi|330254150|gb|AEC09244.1| galactose oxidase/kelch repeat-containing protein [Arabidopsis
thaliana]
Length = 503
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 121/267 (45%), Gaps = 33/267 (12%)
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAK-----QPTWIEVSGGAPP 407
+ P R GHT ++ S +VVFGG + L+D+ V D++ K + T E G P
Sbjct: 15 TPPQARSGHTAVNVGKSMVVVFGGLVDKKFLSDIIVYDIENKLWFEPECTGSESEGQVGP 74
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS--PPSRLG 465
PR++H + I+ + G G L D ++LD TD W E+ TS+ P R
Sbjct: 75 TPRAFHVAITIDCHMFIFGG--RSGGKRLGDFWVLD--TDIWQWSEL-TSFGDLPTPRDF 129
Query: 466 HSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVV 525
+ + G K+++ GG L + Y +D E W +L S S +
Sbjct: 130 AAAAAIGSQKIVLCGGWDGKKWL----SDVYVMDTMSLE--WLEL---------SVSGSL 174
Query: 526 PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLF----LLDPSEEKPSWRILNVPGQPPK 581
PPPR H A +M R+++FGG G L+ L+D E P W L +PGQ P
Sbjct: 175 PPPRCGHTA-TMVEKRLLVFGGRGGGGPIMGDLWALKGLIDEERETPGWTQLKLPGQAPS 233
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWV 608
GH T GG +L+ GGH W+
Sbjct: 234 SRCGH-TVTSGGHYLLLFGGHGTGGWL 259
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVL----NLDAANPEWRR 348
W + +V G++ P RC +A RL++FGG G M D + L + + P W +
Sbjct: 165 WLELSVSGSLPPPRCGHTATMVEKRLLVFGGRGGGGPIMGDLWALKGLIDEERETPGWTQ 224
Query: 349 VSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL-------NDVFVLDLDAKQPTWIE 400
+ + +P R GHT++S G +L++FGG G G L ND +LD Q +
Sbjct: 225 LKLPGQAPSSRCGHTVTS-GGHYLLLFGGHGTGGWLSRYDVYYNDTIILDRVTAQWKRLP 283
Query: 401 VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWRE--IPTSW 458
+ G PP PR++H+ I L++ G D + D + L + D P+ + +P
Sbjct: 284 I-GNEPPPPRAYHTMTCIGARHLLIGG--FDGKLTFGDLWWL-VPEDDPIAKRSSVPQVV 339
Query: 459 SPP 461
+PP
Sbjct: 340 NPP 342
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 133/318 (41%), Gaps = 40/318 (12%)
Query: 305 SRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSS-------PPG 357
+R +A G +V+ G V+ + + D V +++ N W S P
Sbjct: 19 ARSGHTAVNVGKSMVVVFGGLVDKKFLSDIIVYDIE--NKLWFEPECTGSESEGQVGPTP 76
Query: 358 RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV-SGGAPPLPRSWHSSC 416
R H +++ + +FGG L D +VLD D Q W E+ S G P PR + ++
Sbjct: 77 RAFHVAITIDCH-MFIFGGRSGGKRLGDFWVLDTDIWQ--WSELTSFGDLPTPRDFAAAA 133
Query: 417 IIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-PPSRLGHSLSVYGRTK 475
I K+V+ GG D LSD Y++D + + W E+ S S PP R GH+ ++ + +
Sbjct: 134 AIGSQKIVLCGGW-DGKKWLSDVYVMDTMSLE--WLELSVSGSLPPPRCGHTATMVEK-R 189
Query: 476 VLMFGGLAKS----GHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLD 531
+L+FGG G L G ID E P W QL+ P R
Sbjct: 190 LLVFGGRGGGGPIMGDLWALKG---LIDEERETPGWTQLKL---------PGQAPSSRCG 237
Query: 532 HVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP---SEEKPSWRILNVPGQ-PPKFAWGHS 587
H S ++ G G S ++ D W+ L + + PP A+
Sbjct: 238 HTVTSGGHYLLLFGGHGTGGWLSRYDVYYNDTIILDRVTAQWKRLPIGNEPPPPRAYHTM 297
Query: 588 TCVVGGTRVLVLGGHTGE 605
TC+ G R L++GG G+
Sbjct: 298 TCI--GARHLLIGGFDGK 313
>gi|156084410|ref|XP_001609688.1| kelch repeat domain containing/Serine/threonine protein phosphatase
protein [Babesia bovis T2Bo]
gi|154796940|gb|EDO06120.1| kelch repeat domain containing/Serine/threonine protein phosphatase
protein , putative [Babesia bovis]
Length = 799
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 133/267 (49%), Gaps = 30/267 (11%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGC----GRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
P R+GHT +++ +++FGG GR + D+++ DL+ T ++ PLPR
Sbjct: 14 PQARFGHTTTTIGPGKVILFGGAVGDVGRYTITADLYLFDLNTNVST--KLISENTPLPR 71
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVLLSDT-YLLDLTTDKPM-WREIPTS-WSPPSRLGHS 467
+ H++ +E ++VV GG T G L SD YLLDL DK + W +PT+ SP R GH+
Sbjct: 72 AAHAAACVESMQVVVFGGATGGGSLSSDDLYLLDLRRDKHLSWITVPTTGRSPGRRYGHT 131
Query: 468 LSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPP 527
+ V+ + +++ GG + S + + +++ W ++ +F Q PP
Sbjct: 132 M-VFSKPNLVVIGG----NDGQQASNDVWYLNVEKSPFCWVEV---SFPPTLKQ----PP 179
Query: 528 PRLDHVAVSMPCG----RIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ---PP 580
R+ H A G I+IFGG + S + ++ L + +W + P + P
Sbjct: 180 KRVYHSADLCREGPAATMIVIFGGRSSDNRSLNDIWGLRQHRDG-TWDWMEAPVRFITMP 238
Query: 581 KFAWGHSTCVVGGTRVLVLGGHTGEEW 607
+ + HS+C V G +++++GG ++
Sbjct: 239 EPRYQHSSCFV-GPKLVIIGGRNDSDF 264
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 304 PSRCNFSACAAGNRLVLFGGE-GVNMQPMDDTFVLNLDA-ANPEWRRVSVKSSPPGR-WG 360
P + +AC ++V+FGG G DD ++L+L + W V PGR +G
Sbjct: 70 PRAAHAAACVESMQVVVFGGATGGGSLSSDDLYLLDLRRDKHLSWITVPTTGRSPGRRYG 129
Query: 361 HTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS---GGAPPLPRSWHSSCI 417
HT+ + LVV GG Q NDV+ L+++ W+EVS P R +HS+ +
Sbjct: 130 HTM-VFSKPNLVVIGGNDGQQASNDVWYLNVEKSPFCWVEVSFPPTLKQPPKRVYHSADL 188
Query: 418 IE----GSKLVVSGGCTDAGVLLSDTYLLDLTTDKPM-WREIPTSW--SPPSRLGHSLSV 470
+ +V+ GG + L+D + L D W E P + P R HS S
Sbjct: 189 CREGPAATMIVIFGGRSSDNRSLNDIWGLRQHRDGTWDWMEAPVRFITMPEPRYQHS-SC 247
Query: 471 YGRTKVLMFGGLAKSGHLRLRSGESY 496
+ K+++ GG S + S +Y
Sbjct: 248 FVGPKLVIIGGRNDSDFNKPLSVSAY 273
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 141/331 (42%), Gaps = 45/331 (13%)
Query: 294 RKFTVRGAVEPSRCNFSACAAG-NRLVLFGGEGVNM---QPMDDTFVLNLDAANPEWRRV 349
R +++G + +R + G +++LFGG ++ D ++ +L+ N + +
Sbjct: 5 RVISLQGELPQARFGHTTTTIGPGKVILFGGAVGDVGRYTITADLYLFDLNT-NVSTKLI 63
Query: 350 SVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL--NDVFVLDLDA-KQPTWIEVSGGAP 406
S +++P R H + + +VVFGG G L +D+++LDL K +WI V
Sbjct: 64 S-ENTPLPRAAHAAACVESMQVVVFGGATGGGSLSSDDLYLLDLRRDKHLSWITVPTTGR 122
Query: 407 PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI---PTSWSPPSR 463
R + + + LVV GG D +D + L++ W E+ PT PP R
Sbjct: 123 SPGRRYGHTMVFSKPNLVVIGG-NDGQQASNDVWYLNVEKSPFCWVEVSFPPTLKQPPKR 181
Query: 464 LGHSLSVY----GRTKVLMFGGLAKSGHLRLRSGESYTID-----LGDEEPQWKQLECNA 514
+ HS + T +++FGG RS ++ +++ + W +E
Sbjct: 182 VYHSADLCREGPAATMIVIFGG---------RSSDNRSLNDIWGLRQHRDGTWDWMEAPV 232
Query: 515 FTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILN 574
+ +P PR H + + +II G + + + P + D E W ++
Sbjct: 233 ------RFITMPEPRYQHSSCFVGPKLVIIGGRNDSDFNKPLSVSAYD--TETLEWFNMS 284
Query: 575 VPGQPPKFAWGHSTCVVGGTRVLVLGGHTGE 605
+ + HS+ +GG +V + GG + +
Sbjct: 285 AIHR-----FRHSSWAIGG-QVYIFGGFSHQ 309
>gi|448492502|ref|ZP_21608893.1| signal-transducing histidine kinase/response regulator [Halorubrum
californiensis DSM 19288]
gi|445691117|gb|ELZ43311.1| signal-transducing histidine kinase/response regulator [Halorubrum
californiensis DSM 19288]
Length = 743
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+ D D P++YVN+ FE TGY E LGRNCRFLQ D DP V+
Sbjct: 406 LTLTDPHKEDNPMVYVNEPFEDLTGYTKAEALGRNCRFLQGED---------TDPATVAR 456
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ ++ E+ N++KDGTP N LR+AP+ D DG + +G Q
Sbjct: 457 LGEAIDNEEPITVEIRNYRKDGTPFWNELRVAPVYDADGDLIRYLGTQ 504
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D D I VN FE TGY A+E +G LQ + + ++ + + +
Sbjct: 288 DTDGIIDCVNPAFEEITGYTAEEAIGETPAILQSGEH---------EQAFYEDLWQTILD 338
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
G ++ E++N KDG V +AP+ D+ G TH + +
Sbjct: 339 GDVWRNEVVNEHKDGERFVIDQTIAPVTDESGETTHFVAV 378
>gi|291570657|dbj|BAI92929.1| two-component sensor histidine kinase [Arthrospira platensis
NIES-39]
Length = 1240
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+P V++++ + D IIY N FE TGY +EV+G+NCRFLQ P R D
Sbjct: 352 ASPNGIVISESSNNDLQIIYCNAGFEKLTGYTKEEVVGQNCRFLQ--GPDTNR-----DS 404
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ + IRR +++ + L N++KDG+ N L ++P+RD G +TH IGIQ
Sbjct: 405 IAI--IRRAIKQEKGCKVNLKNYRKDGSCFWNELAISPVRDHQGKLTHFIGIQ 455
>gi|260815465|ref|XP_002602493.1| hypothetical protein BRAFLDRAFT_127137 [Branchiostoma floridae]
gi|229287804|gb|EEN58505.1| hypothetical protein BRAFLDRAFT_127137 [Branchiostoma floridae]
Length = 515
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 117/282 (41%), Gaps = 22/282 (7%)
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVS 350
+ W K G + R S C+ G+ L LFGG+ + + + D W R S
Sbjct: 73 LVWEKVPQGGDIPSKRDGASLCSVGSTLYLFGGKSELVADESLSGLYTFDTGTLCWERCS 132
Query: 351 VKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
+ P R H ++ G + VFGG + N +++L+ T + SGG P PR
Sbjct: 133 TQGPQP-RTLHHSQAVVGRNIYVFGGIYKGNATNTMYMLNTATLTWTPLRTSGGKPS-PR 190
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLD---LTTDKPMWREIPTSWSPPSRLGHS 467
HSSC + G K+ V GGC V L+D ++ D LT PM + +PP+R H+
Sbjct: 191 CDHSSCAV-GDKIYVFGGCAGDNVWLNDLHIFDTATLTWTSPMVK----GDAPPARGCHT 245
Query: 468 LSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPP 527
+ + +FGG S + + Y + LG +WK S + P
Sbjct: 246 FVSHHDKDIYVFGGSNDSNIENMSFNDLYKLSLG--RLKWKH---------PLYSGIPPE 294
Query: 528 PRLDHVAVSMPCGRIIIFG-GSIAGLHSPSQLFLLDPSEEKP 568
R H + +I G + L L++PS+ +P
Sbjct: 295 RRYSHTTFILHSHMYVIGGINEQREFNDVHILKLINPSDRQP 336
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 112/300 (37%), Gaps = 43/300 (14%)
Query: 339 LDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG---------------LL 383
+ A+ W + ++ +PP ++ GS +FGG G
Sbjct: 1 MAVASCTWVKKAIHGTPPSPRNSHAMTMVGSIGFLFGGSTCIGGGSTSVFSDDEESASFY 60
Query: 384 NDVFVLDLDAKQPTWIEV-SGGAPPLPRSWHSSCIIEGSKLVVSGGCTD--AGVLLSDTY 440
ND+++L + Q W +V GG P R S C + GS L + GG ++ A LS Y
Sbjct: 61 NDLYMLQVGPSQLVWEKVPQGGDIPSKRDGASLCSV-GSTLYLFGGKSELVADESLSGLY 119
Query: 441 LLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDL 500
D T W T P L HS +V GR + +FGG+ K + + L
Sbjct: 120 TFD--TGTLCWERCSTQGPQPRTLHHSQAVVGRN-IYVFGGIYKG------NATNTMYML 170
Query: 501 GDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFL 560
W L S P PR DH + ++ +I +FGG + L +
Sbjct: 171 NTATLTWTPLRT---------SGGKPSPRCDHSSCAV-GDKIYVFGGCAGDNVWLNDLHI 220
Query: 561 LDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTG---EEWVLNELHELCL 617
D + +W V G P H+ + V GG E N+L++L L
Sbjct: 221 FDTA--TLTWTSPMVKGDAPPARGCHTFVSHHDKDIYVFGGSNDSNIENMSFNDLYKLSL 278
>gi|409990612|ref|ZP_11273963.1| multi-sensor signal transduction histidine kinase [Arthrospira
platensis str. Paraca]
gi|409938523|gb|EKN79836.1| multi-sensor signal transduction histidine kinase [Arthrospira
platensis str. Paraca]
Length = 1240
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+P V++++ + D IIY N FE TGY +EV+G+NCRFLQ P R D
Sbjct: 352 ASPNGIVISESSNNDLQIIYCNAGFEKLTGYTKEEVVGQNCRFLQ--GPDTNR-----DS 404
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ + IRR +++ + L N++KDG+ N L ++P+RD G +TH IGIQ
Sbjct: 405 IAI--IRRAIKQEKGCKVNLKNYRKDGSCFWNELAISPVRDHQGKLTHFIGIQ 455
>gi|30678020|ref|NP_849928.1| protein TWIN LOV 1 [Arabidopsis thaliana]
gi|18146960|dbj|BAB83170.1| twin LOV protein 1 [Arabidopsis thaliana]
gi|330250519|gb|AEC05613.1| protein TWIN LOV 1 [Arabidopsis thaliana]
Length = 397
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ + PD PIIY + F TGY+ EVLG+NCRFL D D V+
Sbjct: 260 SFVLTNPCLPDMPIIYASDAFLTLTGYKRQEVLGQNCRFLSGVD---------TDSSVLY 310
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
E++ C+ +G ++LN++KD + N L ++P+R+ G + +G+Q+
Sbjct: 311 EMKECILKGQSCTVQILNYRKDKSSFWNLLHISPVRNASGKTAYFVGVQV 360
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P +F + D F PI++ + F TGY +EV+GRN + Q P+ RR
Sbjct: 36 PHNFTITDPFISGHPIVFASLGFLKMTGYSREEVIGRNGKVFQ--GPKTNRRS------- 86
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQI 165
+ EIR + E Q LLN++K G+P + P+ DDG VT+ + +Q+
Sbjct: 87 IMEIREAIREERSVQVSLLNYRKSGSPFWMLFHMCPVFGKDDGKVTNFVAVQV 139
>gi|429191743|ref|YP_007177421.1| PAS domain-containing protein [Natronobacterium gregoryi SP2]
gi|448325113|ref|ZP_21514511.1| PAS/PAC sensor protein [Natronobacterium gregoryi SP2]
gi|429135961|gb|AFZ72972.1| PAS domain S-box [Natronobacterium gregoryi SP2]
gi|445616252|gb|ELY69880.1| PAS/PAC sensor protein [Natronobacterium gregoryi SP2]
Length = 1517
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P + D PD PI+Y N FE TGY E GRNCRFLQ R+ D
Sbjct: 308 PIGITITDPRHPDDPIVYANDAFEEMTGYAESECRGRNCRFLQGRE---------TDSEA 358
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V E+R + EL N++KDG+ NR+ +API DD G V + + Q
Sbjct: 359 VRELREAIAAAEPTTVELRNYRKDGSEFWNRVSVAPIEDDQGAVVNFVEFQ 409
>gi|259234231|gb|ACW20291.1| blue light regulator 1, partial [Trichoderma pleuroticola]
Length = 239
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 59 VADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ--RRHPLVDPVVVSE 116
V D D PIIYV+ F+ TGY E++G+NCRFLQ D + + + VD V
Sbjct: 1 VCDVTMNDCPIIYVSDNFQNLTGYSRHEIIGQNCRFLQAPDGKVEAGSKREFVDDGAVFN 60
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
++R ++EG E Q L+N++K G P +N L + PI D + + IG QI
Sbjct: 61 LKRMIQEGREVQQSLINYRKGGKPFLNLLTMIPIPWDTDEIRYFIGFQI 109
>gi|328871987|gb|EGG20357.1| hypothetical protein DFA_07481 [Dictyostelium fasciculatum]
Length = 663
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 15/196 (7%)
Query: 291 VCWRKFTVRGAVEPSRCNFSA--CAAGNRLVLFGG-EGVNMQPMDDTFVLNLDAANPEWR 347
+ W + +V G V P+RC S+ C+ N + +FGG +G N+Q F + + W
Sbjct: 1 MSWTRSSVSGKVAPARCAHSSAYCSKTNSVYIFGGWDGKNVQGDLSQFHVETSS----WL 56
Query: 348 R-VSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV-SGGA 405
++ P R GH+ +LN ++VFGG + +DV++LD+D + W E+ + G
Sbjct: 57 FPLTHGKKPTSRAGHSGVALNSHTILVFGGIEGEFYTSDVYLLDVDTME--WKEMKTSGN 114
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLG 465
P+PRS HS+ ++ GS + + GG +D + + Y LD T K W + SPP+ G
Sbjct: 115 VPMPRSRHSATVV-GSNVYIYGG-SDNHMTFNSLYCLDTLTMK--WSIPNCTGSPPASWG 170
Query: 466 HSLSVYGRTKVLMFGG 481
H Y + F G
Sbjct: 171 HGAIYYAAGNSIYFYG 186
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 33/259 (12%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTF--VLNLDAA 342
L ++ + W++ G V R SA G+ + ++GG +M TF + LD
Sbjct: 98 LLDVDTMEWKEMKTSGNVPMPRSRHSATVVGSNVYIYGGSDNHM-----TFNSLYCLDTL 152
Query: 343 NPEWRRVSVKSSPPGRWGH-TLSSLNGSWLVVFGGCGRQGL------LNDVFVLDLDAKQ 395
+W + SPP WGH + G+ + +GG L N + +LDL
Sbjct: 153 TMKWSIPNCTGSPPASWGHGAIYYAAGNSIYFYGGNSASPLNSGDPTYNGLSILDLTTL- 211
Query: 396 PTWIEVSGGAP-----PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPM 450
TW ++ +P LP + +K VV GG D G +L+DT++LD T +
Sbjct: 212 -TW-RLNVESPEEEDKKLPSRAGHTFTPFNNKFVVFGGVGDGGKILNDTFVLDPVT--LV 267
Query: 451 WREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGH-----LRLRSGESYTIDLGDEEP 505
WR+ +P R H+ + ++ MFGG GH + + E + D+ P
Sbjct: 268 WRQFTADNTPTFRCSHTAEIVSH-QIFMFGG--SDGHRYFKDIAILDAEKVMTKI-DQAP 323
Query: 506 QWKQLECNAFTGVGSQSAV 524
+ K++ F V + V
Sbjct: 324 KKKRIRLRPFKNVPTTDQV 342
>gi|448473479|ref|ZP_21601621.1| PAS-PAC-PAC sensing histidine kinase [Halorubrum aidingense JCM
13560]
gi|445818991|gb|EMA68840.1| PAS-PAC-PAC sensing histidine kinase [Halorubrum aidingense JCM
13560]
Length = 981
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+ADA D D P+ YVN F +GY +EVLGRNCRFLQ + DP V
Sbjct: 154 IAIADA-DNDQPLTYVNDAFVEISGYNREEVLGRNCRFLQGEE---------TDPESVQR 203
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ ++ G EL N++KDGT N L +AP+ D G +TH IG Q
Sbjct: 204 LHDAIDAGETVSVELRNYRKDGTEFWNHLEIAPVYDHTGELTHYIGFQ 251
>gi|448441461|ref|ZP_21589124.1| HTR-like protein [Halorubrum saccharovorum DSM 1137]
gi|445688870|gb|ELZ41117.1| HTR-like protein [Halorubrum saccharovorum DSM 1137]
Length = 590
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
P + D PD P++YVN F TGY D+ +G NCRFLQ +D D
Sbjct: 267 APVGITITDPDLPDNPMVYVNDRFVEVTGYDRDDAVGVNCRFLQGKD---------TDEE 317
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
VS +R ++ ELLN++KDGTP NR+ +API D DG+V+ +G Q
Sbjct: 318 PVSRLREAIDAEEPESVELLNYRKDGTPFWNRVSVAPILDGDGSVSEWVGFQ 369
>gi|255019342|ref|ZP_05291462.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Acidithiobacillus caldus ATCC 51756]
gi|254971214|gb|EET28656.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Acidithiobacillus caldus ATCC 51756]
Length = 913
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D + ++Y N F +GY E+LG+NCRFLQ P DP + L E
Sbjct: 145 DAEQRVVYANPAFLRLSGYELAEILGKNCRFLQ---------GPDTDPATRQSLHDALAE 195
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G F G++LN+++DGTP N L ++P+RD G +TH + +Q
Sbjct: 196 GRVFHGDILNYRQDGTPFWNALNISPVRDAQGHITHFVSVQ 236
>gi|403160687|ref|XP_003321153.2| hypothetical protein PGTG_02195 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170351|gb|EFP76734.2| hypothetical protein PGTG_02195 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1033
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 11/119 (9%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ-------YRDPRAQRR 105
T + VV DA D PII+ F + TGY+ DE++G+NCRFLQ + PR Q
Sbjct: 320 TSAALVVVDARQNDLPIIFATPSFSLLTGYQTDEIIGQNCRFLQKPFNPNSVKKPRDQ-- 377
Query: 106 HPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ +IR ++ G E Q ++N++KDG +N + + PI + ++H +G Q
Sbjct: 378 --AVNCRATLQIRDHIQAGREIQSSIVNYRKDGKAFINLVTVIPIAWNSSEISHFVGFQ 434
>gi|255542910|ref|XP_002512518.1| kelch repeat protein, putative [Ricinus communis]
gi|223548479|gb|EEF49970.1| kelch repeat protein, putative [Ricinus communis]
Length = 616
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 149/348 (42%), Gaps = 35/348 (10%)
Query: 279 GRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLN 338
G L T+ + W V G R SAC + + +FGG + D +LN
Sbjct: 2 GSLGVHETSNKKAMWFYPKVLGFHPSERWGHSACYSHGLVYVFGGCCGGLH-FSDVLMLN 60
Query: 339 LDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTW 398
LD + W ++ PG + L G + VFGG +ND+ +LDL K+ W
Sbjct: 61 LDTMS--WNTLATIGQGPGPRDSHSAVLVGRQMFVFGGTNGSKKVNDLHILDLVTKE--W 116
Query: 399 IEVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGV-LLSDTYLLDLTTDKPMWREIPT 456
I+ G PP PR H++ +I ++++ GG + L+D ++LDL T + E+
Sbjct: 117 IQPECKGTPPCPRESHTATLIGDDRILIFGGSGEGEANYLNDLHVLDLKTMRWSSPEVKG 176
Query: 457 SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESY--TIDLGDEEPQ-WKQLECN 513
P R H G + ++GG G+ Y +D+ D + W +L
Sbjct: 177 DI-PVPRDSHGAVAIG-NDLFVYGG---------DRGDRYHGNVDVLDTDTMTWSKLVVQ 225
Query: 514 AFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRIL 573
+ P R H AV++ G + G + H + +++LD SW L
Sbjct: 226 GSS---------PGVRAGHAAVNI--GNKVYVIGGVGDKHYYNDVWVLDVV--ACSWTQL 272
Query: 574 NVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
++ GQ P+ + H T VV + + + GG +E LNEL L L ++
Sbjct: 273 DICGQQPQGRFSH-TAVVTDSDIAIYGGCGEDEHPLNELLILQLGAEH 319
>gi|30686755|ref|NP_850263.1| galactose oxidase/kelch repeat-containing protein [Arabidopsis
thaliana]
gi|79324451|ref|NP_001031493.1| galactose oxidase/kelch repeat-containing protein [Arabidopsis
thaliana]
gi|20260248|gb|AAM13022.1| unknown protein [Arabidopsis thaliana]
gi|22136502|gb|AAM91329.1| unknown protein [Arabidopsis thaliana]
gi|222423480|dbj|BAH19710.1| AT2G36360 [Arabidopsis thaliana]
gi|330254146|gb|AEC09240.1| galactose oxidase/kelch repeat-containing protein [Arabidopsis
thaliana]
gi|330254147|gb|AEC09241.1| galactose oxidase/kelch repeat-containing protein [Arabidopsis
thaliana]
Length = 496
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 121/267 (45%), Gaps = 33/267 (12%)
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAK-----QPTWIEVSGGAPP 407
+ P R GHT ++ S +VVFGG + L+D+ V D++ K + T E G P
Sbjct: 15 TPPQARSGHTAVNVGKSMVVVFGGLVDKKFLSDIIVYDIENKLWFEPECTGSESEGQVGP 74
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS--PPSRLG 465
PR++H + I+ + G G L D ++LD TD W E+ TS+ P R
Sbjct: 75 TPRAFHVAITIDCHMFIFGG--RSGGKRLGDFWVLD--TDIWQWSEL-TSFGDLPTPRDF 129
Query: 466 HSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVV 525
+ + G K+++ GG L + Y +D E W +L S S +
Sbjct: 130 AAAAAIGSQKIVLCGGWDGKKWL----SDVYVMDTMSLE--WLEL---------SVSGSL 174
Query: 526 PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLF----LLDPSEEKPSWRILNVPGQPPK 581
PPPR H A +M R+++FGG G L+ L+D E P W L +PGQ P
Sbjct: 175 PPPRCGHTA-TMVEKRLLVFGGRGGGGPIMGDLWALKGLIDEERETPGWTQLKLPGQAPS 233
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWV 608
GH T GG +L+ GGH W+
Sbjct: 234 SRCGH-TVTSGGHYLLLFGGHGTGGWL 259
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVL----NLDAANPEWRR 348
W + +V G++ P RC +A RL++FGG G M D + L + + P W +
Sbjct: 165 WLELSVSGSLPPPRCGHTATMVEKRLLVFGGRGGGGPIMGDLWALKGLIDEERETPGWTQ 224
Query: 349 VSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL-------NDVFVLDLDAKQPTWIE 400
+ + +P R GHT++S G +L++FGG G G L ND +LD Q +
Sbjct: 225 LKLPGQAPSSRCGHTVTS-GGHYLLLFGGHGTGGWLSRYDVYYNDTIILDRVTAQWKRLP 283
Query: 401 VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWRE--IPTSW 458
+ G PP PR++H+ I L++ G D + D + L + D P+ + +P
Sbjct: 284 I-GNEPPPPRAYHTMTCIGARHLLIGG--FDGKLTFGDLWWL-VPEDDPIAKRSSVPQVV 339
Query: 459 SPP 461
+PP
Sbjct: 340 NPP 342
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 133/318 (41%), Gaps = 40/318 (12%)
Query: 305 SRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSS-------PPG 357
+R +A G +V+ G V+ + + D V +++ N W S P
Sbjct: 19 ARSGHTAVNVGKSMVVVFGGLVDKKFLSDIIVYDIE--NKLWFEPECTGSESEGQVGPTP 76
Query: 358 RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV-SGGAPPLPRSWHSSC 416
R H +++ + +FGG L D +VLD D Q W E+ S G P PR + ++
Sbjct: 77 RAFHVAITIDCH-MFIFGGRSGGKRLGDFWVLDTDIWQ--WSELTSFGDLPTPRDFAAAA 133
Query: 417 IIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-PPSRLGHSLSVYGRTK 475
I K+V+ GG D LSD Y++D + + W E+ S S PP R GH+ ++ + +
Sbjct: 134 AIGSQKIVLCGGW-DGKKWLSDVYVMDTMSLE--WLELSVSGSLPPPRCGHTATMVEK-R 189
Query: 476 VLMFGGLAKS----GHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLD 531
+L+FGG G L G ID E P W QL+ P R
Sbjct: 190 LLVFGGRGGGGPIMGDLWALKG---LIDEERETPGWTQLKL---------PGQAPSSRCG 237
Query: 532 HVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP---SEEKPSWRILNVPGQ-PPKFAWGHS 587
H S ++ G G S ++ D W+ L + + PP A+
Sbjct: 238 HTVTSGGHYLLLFGGHGTGGWLSRYDVYYNDTIILDRVTAQWKRLPIGNEPPPPRAYHTM 297
Query: 588 TCVVGGTRVLVLGGHTGE 605
TC+ G R L++GG G+
Sbjct: 298 TCI--GARHLLIGGFDGK 313
>gi|18277872|sp|Q39610.2|DYHA_CHLRE RecName: Full=Dynein alpha chain, flagellar outer arm; AltName:
Full=DHC alpha
gi|6007859|gb|AAA57316.2| dynein heavy chain alpha [Chlamydomonas reinhardtii]
Length = 4499
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 290 AVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVN---MQPMDDTFVLNLDAANPE- 345
++ W +G R S G R VLFGG G +D + LD ++P+
Sbjct: 2 SIFWEVPNAQGEAPCPRSGHSFTVLGERFVLFGGCGRKDGKAAAFNDLY--ELDTSDPDE 59
Query: 346 --WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
W+ + V ++PP R H +L+ L+VFGG ++ NDV++ + D K T +EV G
Sbjct: 60 YKWKELVVANAPPPRARHAAIALDDKRLLVFGGLNKRIRYNDVWLFNYDDKSWTCMEVEG 119
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS---P 460
AP PR+ H + GS++ + GG +G + ++ ++L D W+ I S P
Sbjct: 120 AAPE-PRA-HFTATRFGSRVFIFGGYGGSGQVYNEMWVLHFGEDGFRWQNITESIEGTGP 177
Query: 461 PSRLGHSLSVYGRT-------KVLMFGG 481
R HS +Y T K+L+ GG
Sbjct: 178 APRFDHSAFIYPVTPNSDTYDKLLIMGG 205
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 453 EIPTSW--SPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD-EEPQWKQ 509
E+P + +P R GHS +V G + ++FGG + + Y +D D +E +WK+
Sbjct: 6 EVPNAQGEAPCPRSGHSFTVLGE-RFVLFGGCGRKDGKAAAFNDLYELDTSDPDEYKWKE 64
Query: 510 LECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGL-HSPSQLFLLDPSEEKP 568
L A PPPR H A+++ R+++FGG + ++ LF D
Sbjct: 65 LVV----------ANAPPPRARHAAIALDDKRLLVFGGLNKRIRYNDVWLFNYDDK---- 110
Query: 569 SWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEL 612
SW + V G P+ H T G+RV + GG+ G V NE+
Sbjct: 111 SWTCMEVEGAAPE-PRAHFTATRFGSRVFIFGGYGGSGQVYNEM 153
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 30/211 (14%)
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGC---TDAGVLLSDTYLLDLTT-DKPMWREIPTSWS 459
G P PRS HS ++ G + V+ GGC +D Y LD + D+ W+E+ + +
Sbjct: 12 GEAPCPRSGHSFTVL-GERFVLFGGCGRKDGKAAAFNDLYELDTSDPDEYKWKELVVANA 70
Query: 460 PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVG 519
PP R H+ ++L+FGGL K R+R + + + D+ W +E
Sbjct: 71 PPPRARHAAIALDDKRLLVFGGLNK----RIRYNDVWLFNYDDK--SWTCMEV------- 117
Query: 520 SQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRIL--NVPG 577
P PR H + R+ IFGG +++++L E+ W+ + ++ G
Sbjct: 118 --EGAAPEPRA-HFTATRFGSRVFIFGGYGGSGQVYNEMWVLHFGEDGFRWQNITESIEG 174
Query: 578 QPPKFAWGHSTCVVGGT-------RVLVLGG 601
P + HS + T ++L++GG
Sbjct: 175 TGPAPRFDHSAFIYPVTPNSDTYDKLLIMGG 205
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W K V GA R + C GN LVL+GG+ + VLN + A W +V
Sbjct: 538 WTKHRVMGAAPAKRKGATICTMGNELVLYGGDKSGVT------VLNTEGAEWRWSPATVS 591
Query: 353 -SSPPGRWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVL 389
S+PP R H+ L+ LVVFGG Q LND++ L
Sbjct: 592 GSTPPDRTAHSTVVLSDGELVVFGGINLADQNDLNDIYYL 631
>gi|440723539|ref|ZP_20903902.1| histidine kinase [Pseudomonas syringae BRIP34876]
gi|440728023|ref|ZP_20908246.1| histidine kinase [Pseudomonas syringae BRIP34881]
gi|443643766|ref|ZP_21127616.1| Signal transduction histidine kinase [Pseudomonas syringae pv.
syringae B64]
gi|440359514|gb|ELP96822.1| histidine kinase [Pseudomonas syringae BRIP34876]
gi|440362552|gb|ELP99739.1| histidine kinase [Pseudomonas syringae BRIP34881]
gi|443283783|gb|ELS42788.1| Signal transduction histidine kinase [Pseudomonas syringae pv.
syringae B64]
Length = 534
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 30 TTRMPMIVTDPNRPDNPIIFANQAFLEMTGYASEEIIGSNCRFLQ---------GPDTDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V IR +EE ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AAVQSIRDAIEERVDISTEILNYRKDGSSFWNALFISPVYNDAGDLIYFFASQL 134
>gi|264678991|ref|YP_003278898.1| PAS/PAC sensor-containing diguanylate cyclase [Comamonas
testosteroni CNB-2]
gi|262209504|gb|ACY33602.1| diguanylate cyclase with PAS/PAC sensor [Comamonas testosteroni
CNB-2]
Length = 458
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 81/164 (49%), Gaps = 24/164 (14%)
Query: 38 DTELSLKPGLLFYPTTP--TSFVVADA-FDPDFPII-YVNKVFEIFTGYRADEVLGRNCR 93
D+ L +P LL + V+ DA P I Y NK F TGY +E+LGR+ R
Sbjct: 12 DSRLDTQPQLLEVAVAQAFNAVVITDAEMAGGGPFIRYCNKAFTSMTGYATEELLGRSPR 71
Query: 94 FLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDD 153
LQ P D V+ ++R+CL EG FQG +N++KDGTP ++ +RD
Sbjct: 72 MLQ---------GPETDQQVIEQLRQCLAEGRFFQGSAVNYRKDGTPYHVSWNISAVRDV 122
Query: 154 DGTVTHIIGI------QIFSEAKID-----LNHVSYPVFKENCN 186
+G +TH + + Q+ SE + D LN + PVF + N
Sbjct: 123 NGKITHFVSVQQDVTRQVESERQRDLMIQALNSANAPVFITDRN 166
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D + +++VN FE TGY A EV+GR LQ AQ +E+R L
Sbjct: 164 DRNGYLVFVNHAFEHQTGYCAAEVMGRTPAMLQSGSHTAQ---------FYAELRDALVR 214
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
G F +N +KDG ++ +RD +TH + I
Sbjct: 215 GENFSRTFINRRKDGELYHAAQSISALRDARHRITHYVSI 254
>gi|340509288|gb|EGR34838.1| hypothetical protein IMG5_000660 [Ichthyophthirius multifiliis]
Length = 559
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 135/287 (47%), Gaps = 26/287 (9%)
Query: 325 GVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLN 384
G Q +D+ + +N++ + + + + P R H + G ++++GG + +L
Sbjct: 252 GYRGQYLDNLWRMNVNTYDADLIDMQSGTIPDERAYHQTVNY-GQKILLYGGLNSEKILT 310
Query: 385 DVFVLDLDAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGG--CT---DAGVLLSD 438
D +V + TW GG P PR +S CI++ L++ GG C+ +A +D
Sbjct: 311 DYYVFN--TSNLTWDRAELGGQKPSPRERNSMCILKKKALIIFGGYYCSEDFEAEYHYND 368
Query: 439 TYLLDLTTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKS-GHLRLRSGESY 496
+ L+L K W E+ P R H+ ++Y + K+ +FGGL K+ + + +
Sbjct: 369 LFSLNLQNLK--WSELKVQDELPEQRFAHTANIY-KHKMYIFGGLQKNMANPAKNFNDVW 425
Query: 497 TIDLGDE-EPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSP 555
IDL +E + +W+ L + P PR H++V + ++ FGG
Sbjct: 426 FIDLEEENQLKWRNL-------TPQLKGIAPKPRHGHISV-LVGKLLLFFGGRGNNKVLF 477
Query: 556 SQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGH 602
+ F+LD ++ W ++ G+PPK + H+ C++ +++ GG+
Sbjct: 478 NDTFILDIRLKQ--WIQPDIKGEPPKPRYYHAACLL-DKEIIIFGGN 521
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 284 ELTTLEAVCWRKFT--VRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDA 341
+L + WR T ++G R + G L+ FGG G N +DTF+L++
Sbjct: 428 DLEEENQLKWRNLTPQLKGIAPKPRHGHISVLVGKLLLFFGGRGNNKVLFNDTFILDIRL 487
Query: 342 ANPEWRRVSVKSSPPG-RWGHTLSSLNGSWLVVFGG---CGRQGLLNDVFVLDLDAK 394
+W + +K PP R+ H L+ +++FGG G++ +V++L + K
Sbjct: 488 K--QWIQPDIKGEPPKPRYYHAACLLDKE-IIIFGGNISFGQKQKSRNVYILKFENK 541
>gi|422631639|ref|ZP_16696822.1| histidine kinase [Pseudomonas syringae pv. pisi str. 1704B]
gi|330941469|gb|EGH44279.1| histidine kinase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 534
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 30 TTRMPMIVTDPNRPDNPIIFANQAFLEMTGYASEEIIGSNCRFLQ---------GPDTDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V IR +EE ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AAVQSIRDAIEERVDISTEILNYRKDGSSFWNALFISPVYNDAGDLIYFFASQL 134
>gi|359394678|ref|ZP_09187731.1| hypothetical protein KUC_1328 [Halomonas boliviensis LC1]
gi|357971925|gb|EHJ94370.1| hypothetical protein KUC_1328 [Halomonas boliviensis LC1]
Length = 931
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 39 TELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR 98
TE LK ++ V+ DA D P++YVN FE TGY ++VLG NCRFLQ
Sbjct: 360 TEHQLKLLERSVESSTNGVVIVDAQRSDLPMVYVNAAFERITGYARNQVLGHNCRFLQGD 419
Query: 99 DPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVT 158
+ DP + ++ + E E + N+++DGT N L ++P+ D++ VT
Sbjct: 420 E---------TDPATIKQLHAGIVEQREVHVVIRNYRRDGTVFWNDLYISPVLDENAEVT 470
Query: 159 HIIGIQ 164
H IG+Q
Sbjct: 471 HFIGVQ 476
>gi|443469433|ref|ZP_21059602.1| diguanylate cyclase/phosphodiesterase [Pseudomonas
pseudoalcaligenes KF707]
gi|443473283|ref|ZP_21063308.1| diguanylate cyclase/phosphodiesterase [Pseudomonas
pseudoalcaligenes KF707]
gi|442898836|gb|ELS25431.1| diguanylate cyclase/phosphodiesterase [Pseudomonas
pseudoalcaligenes KF707]
gi|442903846|gb|ELS29137.1| diguanylate cyclase/phosphodiesterase [Pseudomonas
pseudoalcaligenes KF707]
Length = 1068
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
V+ DA + D PIIYVN FE TGY A E++G NCR LQ R +R D + I
Sbjct: 385 VIVDAQEFDQPIIYVNPAFERITGYSAHEIIGHNCRILQ----RGER-----DQTALDVI 435
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R L + E L N++KDG+P N L ++P+ ++ G +TH +G+Q
Sbjct: 436 RHGLAQSSEAHVVLRNYRKDGSPFWNDLYISPVLNERGELTHFVGVQ 482
>gi|345564431|gb|EGX47394.1| hypothetical protein AOL_s00083g487 [Arthrobotrys oligospora ATCC
24927]
Length = 908
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR--DPRAQRRHPLVDPVV 113
+FVV DA D PI+Y + FE TGY E+LGRNCRFLQ D + VD
Sbjct: 260 AFVVCDARKYDMPIVYCSATFERLTGYTKHEILGRNCRFLQSPTGDVEKGAKRKYVDEES 319
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ E+ E Q L+N++K G P +N L PI D + +I+G Q+
Sbjct: 320 VRYLKQQCEDLDEAQVSLINYRKGGQPFMNLLTTIPISWDTDDIVYIVGFQV 371
>gi|443922405|gb|ELU41858.1| white collar 1 protein (WC1) [Rhizoctonia solani AG-1 IA]
Length = 872
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
SF V D D PI+Y + F TGY E++GRNCRFLQ + + +R D
Sbjct: 333 SFTVVDVKRYDHPIVYASPTFHRLTGYEQHEIIGRNCRFLQAPNGKVERGSTRTYTDNAA 392
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V+ ++ L E Q L+N++K+G P +N + + PI D + + +G Q+
Sbjct: 393 VAHFKKSLSADKECQASLINYRKNGQPFINLVSIIPITWDSDDIRYHVGFQV 444
>gi|427707466|ref|YP_007049843.1| multi-sensor hybrid histidine kinase [Nostoc sp. PCC 7107]
gi|427359971|gb|AFY42693.1| multi-sensor hybrid histidine kinase [Nostoc sp. PCC 7107]
Length = 1567
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
++ADA P+ PIIYVN FE+ TGY + E++G NC FL DP + P + +
Sbjct: 455 IIIADARLPNQPIIYVNPAFELITGYSSAEIIGYNCAFLPGTDP--------LQP-AIQQ 505
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
++ ++ G Q L N++KDG+ N L ++PI DD G ++H IGI
Sbjct: 506 LQTSMKAGKSCQVLLRNYRKDGSLFWNELSISPIYDDAGRLSHFIGI 552
>gi|448384535|ref|ZP_21563373.1| bacterio-opsin activator [Haloterrigena thermotolerans DSM 11522]
gi|445658601|gb|ELZ11419.1| bacterio-opsin activator [Haloterrigena thermotolerans DSM 11522]
Length = 627
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 70/148 (47%), Gaps = 25/148 (16%)
Query: 27 SFEGGGGGGGDDTELSLKPGLLF----YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGY 82
+F+ G G D+ L+ L P ++D D P++YVN+ +E TGY
Sbjct: 104 TFDRGATGADDEGALAGTRDRLVKDRALEEAPVGITISDPDMEDNPLVYVNEAYEEMTGY 163
Query: 83 RADEVLGRNCRFLQYRDPRAQRRHPLVD------PVVVSEIRRCLEEGIEFQGELLNFKK 136
DEV+GRNCRFLQ D + PV V EL N++K
Sbjct: 164 EYDEVVGRNCRFLQGEDSSEAAIAEMAAAVAEDYPVTV---------------ELKNYRK 208
Query: 137 DGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
DGT N + +AP+RD+DG VT+ +G Q
Sbjct: 209 DGTEFWNEVTIAPVRDEDGAVTNYVGFQ 236
>gi|284166481|ref|YP_003404760.1| multi-sensor signal transduction histidine kinase [Haloterrigena
turkmenica DSM 5511]
gi|284016136|gb|ADB62087.1| multi-sensor signal transduction histidine kinase [Haloterrigena
turkmenica DSM 5511]
Length = 654
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 40 ELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD 99
EL LK + P ++DA PD P++Y N FE TGY +E+LGRNCRFLQ
Sbjct: 316 ELELKNRTI--DEAPIGITLSDATRPDNPLVYANDQFERLTGYAREEILGRNCRFLQG-- 371
Query: 100 PRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTH 159
+P V ++R ++ EL N++KDG+ NR+ +AP+ D++G VT+
Sbjct: 372 -----ERTATEP--VDDLRAAIDAERSNTVELRNYRKDGSEFWNRVTVAPVADENGDVTN 424
Query: 160 IIGIQ 164
+G Q
Sbjct: 425 YVGFQ 429
>gi|67525955|ref|XP_661039.1| hypothetical protein AN3435.2 [Aspergillus nidulans FGSC A4]
gi|40743724|gb|EAA62912.1| hypothetical protein AN3435.2 [Aspergillus nidulans FGSC A4]
Length = 366
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHP--LVDPVV 113
+FV+ D D PI+YV+ FE TGY E++GRNCRFLQ D + ++ P VD
Sbjct: 240 AFVLCDLTMEDSPIVYVSHAFERLTGYNEKEIVGRNCRFLQSPDAKVEKGEPRKFVDSHT 299
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR 151
VS +R ++ E Q ++N++K G P +N + + P+R
Sbjct: 300 VSRLRSAVDRRSEIQVSIINYRKGGQPFLNLVTMIPVR 337
>gi|408380125|ref|ZP_11177713.1| sensory box histidine kinase [Agrobacterium albertimagni AOL15]
gi|407745966|gb|EKF57494.1| sensory box histidine kinase [Agrobacterium albertimagni AOL15]
Length = 375
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 29/225 (12%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ T ++ D PD PII+ N+ F TGY DE++GRNCR LQ P
Sbjct: 32 FKATRMPMLITDPRQPDNPIIFCNQAFSNLTGYSIDELIGRNCRLLQ---------GPET 82
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI-FSE 168
D V+ +R + + ++LN++KDG+ N L ++P+RD DG V + Q+ F+
Sbjct: 83 DSNAVARLREAIAAEQDLAIDILNYRKDGSQFWNALFVSPVRDADGEVVYFFASQLDFTT 142
Query: 169 AK---IDLNHVSYPVFKENCNQQYD-------QSAQYFSGGHSPLSQHQDICGILQLSDE 218
K +DL + +E + +D Q+ H + I I++L
Sbjct: 143 IKSKELDLAEARHSAEREVARRTHDLSEALKAQTLLVHEVDHRVKNNLLTIASIVKLQAR 202
Query: 219 VLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGR 263
+ ++++ R ++ SV R+ L+ + RK+ GR
Sbjct: 203 MSENDLVKR-------TLFSVLNRVEALSTVQ--RKLFTSADLGR 238
>gi|402073073|gb|EJT68709.1| cellulose signaling associated protein ENVOY [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 191
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ-------RRHPL 108
+ V+ D PD PI+YV+ FE TGY A EV+G NCRFLQ R+ RRH
Sbjct: 73 AMVLCDLAQPDAPIVYVSGPFEELTGYSAAEVVGHNCRFLQAPPGRSSPVRQGSARRHVP 132
Query: 109 VDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTH 159
D +V +RR +E E Q E+ NF+KDG+ N L + PI DD V H
Sbjct: 133 KD--LVRSMRRSVERNDELQLEVPNFRKDGSAFTNFLTIIPISWDDSGVYH 181
>gi|448394478|ref|ZP_21568283.1| bacterio-opsin activator [Haloterrigena salina JCM 13891]
gi|445662520|gb|ELZ15288.1| bacterio-opsin activator [Haloterrigena salina JCM 13891]
Length = 643
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++YVN ++ TGY DEV+GRNCRFLQ D +Q
Sbjct: 146 PVGITISDPDREDNPLVYVNDAYQEITGYGYDEVVGRNCRFLQGED--SQEVAVAEMAAA 203
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ E R EL N+++DGT N + +AP+RD+DGTVT+ +G Q
Sbjct: 204 IDEER-------PVTVELKNYRRDGTEFWNEVTIAPVRDEDGTVTNYVGFQ 247
>gi|348531349|ref|XP_003453172.1| PREDICTED: acyl-CoA-binding domain-containing protein 5-like
[Oreochromis niloticus]
Length = 582
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 15/221 (6%)
Query: 279 GRLARELTTLEAVCWR--KFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFV 336
GR EL L + W+ +G+V P+ SA L +FGG ++ D +
Sbjct: 339 GRRYTELYILNTLTWKWKLVNAKGSV-PNLAYHSAVFYKKELFVFGGVQSSLSSGDKSCS 397
Query: 337 LNLDAANPE---WRRVSVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLD 392
L NPE W + V+ P R+GHT + L+ L++FGG ND+ VLDL
Sbjct: 398 NALYIFNPEFGLWYQPIVEGDRPLPRFGHTATLLSQK-LIIFGGRKTAAYFNDLHVLDLG 456
Query: 393 AKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWR 452
+ T ++ SG PPLPR +H++ + ++++VSGGC+ G L D ++ + TD MW
Sbjct: 457 FMEYTAVK-SGNMPPLPRGFHAALPVSDNRILVSGGCSAIGA-LQDVHIFN--TDTNMWT 512
Query: 453 EI--PTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLR 491
+ P S P R GHS+ + G + G + +++L+
Sbjct: 513 SLASPLLCSRP-RAGHSMMLLGSAILRDTGTHGQGENVKLQ 552
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 127/323 (39%), Gaps = 52/323 (16%)
Query: 299 RGAVEPSRCNFSACAAG-NRLVLFGGEGVNMQPMDDT-----------FVLNLDAANPEW 346
RGA R + C + + +L GGE D+ F LN A+ PE
Sbjct: 254 RGACPSKRWCHTMCLSDPDTAILIGGETSEQNYCKDSLWKLELDGDFWFPLNSSASGPE- 312
Query: 347 RRVSVKSSPPGRWGHTLS-SLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGA 405
PP GHT + + + V+GG ++++L+ + + G
Sbjct: 313 --------PPCARGHTATYDPDSKAVFVYGGLKEGRRYTELYILNTLTWKWKLVNAKGSV 364
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDA---GVLLSDTYLLDLTTDKPMWRE-IPTSWSPP 461
P L ++HS+ + +L V GG + G L + +W + I P
Sbjct: 365 PNL--AYHSA-VFYKKELFVFGGVQSSLSSGDKSCSNALYIFNPEFGLWYQPIVEGDRPL 421
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
R GH+ ++ + K+++FGG + + + + +DLG E +T V +
Sbjct: 422 PRFGHTATLLSQ-KLIIFGGRKTAAYF----NDLHVLDLGFME----------YTAV--K 464
Query: 522 SAVVPP-PRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEEKPSWRILNVPGQP 579
S +PP PR H A+ + RI++ GG S G +F D + W L P
Sbjct: 465 SGNMPPLPRGFHAALPVSDNRILVSGGCSAIGALQDVHIFNTDTN----MWTSLASPLLC 520
Query: 580 PKFAWGHSTCVVGGTRVLVLGGH 602
+ GHS ++G + G H
Sbjct: 521 SRPRAGHSMMLLGSAILRDTGTH 543
>gi|350537683|ref|NP_001234816.1| LOV/LOV protein [Solanum lycopersicum]
gi|311692316|dbj|BAJ24889.1| LOV/LOV protein [Solanum lycopersicum]
Length = 398
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ DA PD PI+Y + F GY EVLGRNCRFL D +
Sbjct: 259 SFVLTDAHLPDMPIVYASDAFLKLIGYLRHEVLGRNCRFLSGEDTERGTQF--------- 309
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+I++C++ +LN++KDGT N L ++PIR G V + +GIQI
Sbjct: 310 QIKQCIQNEQPCTVHILNYRKDGTSFWNFLHISPIRSASGKVAYFVGIQI 359
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P SF + D PI+YV++ F GY +EVLG+N R Q P+ RR
Sbjct: 28 PDSFTITDPSISGHPIVYVSRGFLKVFGYSKNEVLGKNGRVFQ--GPKTNRRS------- 78
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPI-RDDDGTVTHIIGIQI 165
V IR + E Q LLN++KDGTP + P+ + DG V H +GIQ+
Sbjct: 79 VMAIREAIREERGIQISLLNYRKDGTPFWMLFNMCPVYSEKDGRVVHFLGIQV 131
>gi|66796153|dbj|BAD99145.1| hypothetical protein [Coprinopsis cinerea]
Length = 1175
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV--- 112
SFVV D D PI+Y + F TGY DEV+GRNCRFLQ + ++ P DP
Sbjct: 313 SFVVVDTRRQDHPIVYCSPSFLKLTGYPEDEVIGRNCRFLQSPTGKMEQGEPRPDPATQT 372
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPI 150
+++++CL E Q L N++KDGTP N + + PI
Sbjct: 373 AAAQMKKCLNADKECQLVLTNYRKDGTPFTNLVTVIPI 410
>gi|428776862|ref|YP_007168649.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
[Halothece sp. PCC 7418]
gi|428691141|gb|AFZ44435.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Halothece sp. PCC 7418]
Length = 731
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
++ DA D PIIYVN+ FE TGY +EV G NCRFL + + +S+
Sbjct: 38 IIITDAQQEDDPIIYVNEAFENMTGYAFNEVAGHNCRFLHGHHCQQED---------LSK 88
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR+ L+EG E L N++KDG+ N L +AP+ + +TH IG+Q
Sbjct: 89 IRQALQEGKECCAVLKNYRKDGSEFWNELYIAPVHNAQNQITHHIGVQ 136
>gi|159471175|ref|XP_001693732.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283235|gb|EDP08986.1| predicted protein [Chlamydomonas reinhardtii]
Length = 115
Score = 81.6 bits (200), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/107 (42%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 59 VADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIR 118
++D PD PI+Y N+ F TGY +EVLGRNCRFLQ P DP V+ IR
Sbjct: 7 ISDPSLPDNPIVYTNQAFLAMTGYSREEVLGRNCRFLQ---------GPDTDPGSVAAIR 57
Query: 119 RCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRD-DDGTVTHIIGIQ 164
L + L+N+ K G VN LRLAP+R+ G V I+G+Q
Sbjct: 58 EALSQRRGATVRLVNYTKQGCRFVNELRLAPVREPGSGRVIAIVGVQ 104
>gi|169851941|ref|XP_001832659.1| photoreceptor A [Coprinopsis cinerea okayama7#130]
gi|116506307|gb|EAU89202.1| photoreceptor A [Coprinopsis cinerea okayama7#130]
Length = 1174
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV--- 112
SFVV D D PI+Y + F TGY DEV+GRNCRFLQ + ++ P DP
Sbjct: 312 SFVVVDTRRQDHPIVYCSPSFLKLTGYPEDEVIGRNCRFLQSPTGKMEQGEPRPDPATQT 371
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPI 150
+++++CL E Q L N++KDGTP N + + PI
Sbjct: 372 AAAQMKKCLNADKECQLVLTNYRKDGTPFTNLVTVIPI 409
>gi|399087808|ref|ZP_10753267.1| PAS domain S-box [Caulobacter sp. AP07]
gi|398031967|gb|EJL25334.1| PAS domain S-box [Caulobacter sp. AP07]
Length = 369
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T + +V D D PII+ N F TGY DEV+GRNCRFLQ P DP
Sbjct: 30 ATRMAMIVTDPHQADNPIIFANDAFLKLTGYPHDEVIGRNCRFLQG---------PDTDP 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +R + +G + ++LN++KDG+ N L ++P+RD G V + Q+
Sbjct: 81 VQADRVREAIAKGEDAVVDILNYRKDGSSFWNALHVSPVRDKAGEVAYFFASQL 134
>gi|237797307|ref|ZP_04585768.1| histidine kinase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020157|gb|EGI00214.1| histidine kinase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 534
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY A E++G NCRFLQ P D
Sbjct: 30 TTRMPMIVTDPNRPDNPIIFSNRAFLDMTGYSASEIIGTNCRFLQ---------GPDTDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV IR +++ ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AVVQSIRNAIQDRVDISTEILNYRKDGSTFWNALFISPVYNDAGDLIYFFASQL 134
>gi|356519144|ref|XP_003528234.1| PREDICTED: uncharacterized protein LOC100808826 [Glycine max]
Length = 583
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 355 PPGRWGHTLSSL-NGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPTWIEVS-GGAPPLPRS 411
P RWGHT +++ +G L +FGG G+ N V V D + +W E + G PP PR
Sbjct: 15 PGKRWGHTCNAVKDGRLLYLFGGYGKFNCQTNQVHV--FDTLKQSWSEPAIKGPPPTPRD 72
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVY 471
H SC + G L V GG TD LL+D +LD +++ ++ + +P +R GH ++
Sbjct: 73 SH-SCTVIGDNLFVFGG-TDGTKLLNDLQILDTSSNTWVFPTV-RGEAPDAREGHDAALV 129
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESYTID---LGDEEPQWKQLECNAFTGVGSQSAVVPPP 528
G+ ++ +FGG KS E Y D L E W + + S P P
Sbjct: 130 GK-RLFVFGGCGKSAD---NINEVYYNDLYILNTELFVWNR---------ATTSGTPPSP 176
Query: 529 RLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ--PPKFAWGH 586
R H S +II+ GG S + +LD + W L GQ PP+ GH
Sbjct: 177 RDGHTCSSWR-NKIIVIGGEDENDSYLSDVHILD--TDTLIWSKLCTSGQLLPPRA--GH 231
Query: 587 STCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
ST V G + V GG T + N+L+ L + +
Sbjct: 232 ST-VSFGMNLFVFGGFTDAHNLYNDLYMLNIET 263
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 14/216 (6%)
Query: 280 RLARELTTLE--AVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVL 337
+L +L L+ + W TVRG +R A G RL +FGG G + +++ +
Sbjct: 93 KLLNDLQILDTSSNTWVFPTVRGEAPDAREGHDAALVGKRLFVFGGCGKSADNINEVYYN 152
Query: 338 NLDAANPE---WRRVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDA 393
+L N E W R + +PP R GHT SS +V+ G L+DV +LD D
Sbjct: 153 DLYILNTELFVWNRATTSGTPPSPRDGHTCSSWRNKIIVIGGEDENDSYLSDVHILDTDT 212
Query: 394 KQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWRE 453
+ + SG P PR+ HS+ G L V GG TDA L +D Y+L++ T +W +
Sbjct: 213 LIWSKLCTSGQLLP-PRAGHSTVSF-GMNLFVFGGFTDAHNLYNDLYMLNIET--CVWTK 268
Query: 454 IPTSWSPPSR----LGHSLSVYGRTKVLMFGGLAKS 485
+ T+ + PS G L Y ++ GG ++
Sbjct: 269 VATTPNGPSARFSVAGDCLDPYMSGVLVFVGGCNRN 304
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLN----LDAANPEWRR 348
W + ++G R + S G+ L +FGG D T +LN LD ++ W
Sbjct: 58 WSEPAIKGPPPTPRDSHSCTVIGDNLFVFGG-------TDGTKLLNDLQILDTSSNTWVF 110
Query: 349 VSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLD---LDAKQPTWIE-VS 402
+V+ +P R GH ++L G L VFGGCG+ +N+V+ D L+ + W +
Sbjct: 111 PTVRGEAPDAREGHD-AALVGKRLFVFGGCGKSADNINEVYYNDLYILNTELFVWNRATT 169
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-PP 461
G PP PR H +C +K++V GG + LSD ++LD TD +W ++ TS P
Sbjct: 170 SGTPPSPRDGH-TCSSWRNKIIVIGGEDENDSYLSDVHILD--TDTLIWSKLCTSGQLLP 226
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHL 488
R GHS +G + +FGG + +L
Sbjct: 227 PRAGHSTVSFG-MNLFVFGGFTDAHNL 252
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 117/264 (44%), Gaps = 34/264 (12%)
Query: 307 CNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPG-RWGHTLSS 365
CN A G L LFGG G + V D W ++K PP R H+ +
Sbjct: 23 CN--AVKDGRLLYLFGGYGKFNCQTNQVHVF--DTLKQSWSEPAIKGPPPTPRDSHSCTV 78
Query: 366 LNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVV 425
+ G L VFGG LLND+ +LD + + V G AP R H + ++ G +L V
Sbjct: 79 I-GDNLFVFGGTDGTKLLNDLQILDTSSNTWVFPTVRGEAPDA-REGHDAALV-GKRLFV 135
Query: 426 SGGCTDAGVLLSDTYLLD---LTTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVLMFGG 481
GGC + +++ Y D L T+ +W TS +PPS R GH+ S + R K+++ GG
Sbjct: 136 FGGCGKSADNINEVYYNDLYILNTELFVWNRATTSGTPPSPRDGHTCSSW-RNKIIVIGG 194
Query: 482 LAKSGHLRLRSGESYTID---LGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMP 538
++ +SY D L + W +L S + PPR H VS
Sbjct: 195 EDEN--------DSYLSDVHILDTDTLIWSKL---------CTSGQLLPPRAGHSTVSFG 237
Query: 539 CGRIIIFGGSIAGLHSPSQLFLLD 562
+ +FGG + + L++L+
Sbjct: 238 M-NLFVFGGFTDAHNLYNDLYMLN 260
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 65/162 (40%), Gaps = 7/162 (4%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
+ E W + T G R + + N++++ GGE N + D +L+ D
Sbjct: 156 ILNTELFVWNRATTSGTPPSPRDGHTCSSWRNKIIVIGGEDENDSYLSDVHILDTDTL-- 213
Query: 345 EWRRVSVKSS-PPGRWGHTLSSLNGSWLVVFGG-CGRQGLLNDVFVLDLDAKQPTWIEVS 402
W ++ P R GH+ S G L VFGG L ND+++L+++ T + +
Sbjct: 214 IWSKLCTSGQLLPPRAGHSTVSF-GMNLFVFGGFTDAHNLYNDLYMLNIETCVWTKVATT 272
Query: 403 GGAPPLPRSWHSSCI--IEGSKLVVSGGCTDAGVLLSDTYLL 442
P S C+ LV GGC L D Y L
Sbjct: 273 PNGPSARFSVAGDCLDPYMSGVLVFVGGCNRNLEALDDMYYL 314
>gi|320169055|gb|EFW45954.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1212
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP 344
LTT W K TV G P R ++ + ++L +GG+ D ++LN +
Sbjct: 65 LTTAGLSSWVKLTVTGVPPPPRVAHASAYSADKLFNWGGKVAAGIVDTDVYILN--TVSK 122
Query: 345 EWRRVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGL--LNDVFVLDLDAKQPTWIEV 401
W R +PP R HTLS ++ +VV G G + D+F+LD + T + V
Sbjct: 123 AWSRPRTTGTPPKPRIHHTLSIIDDRLVVVGGQSDTPGTAAIGDLFILDTRSLAWTEVPV 182
Query: 402 SGG--APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS 459
GG A L R+ HS+ +++G KL V GG + +G LL D D + W + S
Sbjct: 183 KGGISASQLARTRHSAEVVDG-KLYVFGGASASGALLQDLLAFDFASQ--TWSAVSQRGS 239
Query: 460 -PPSRLGHSLSVYGRTKVLMFGGLAKSG 486
PP+R GHS + G+ + FGG +G
Sbjct: 240 PPPARAGHSSAAVGKV-LYFFGGQNNAG 266
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVN--MQPMDDTFVLNLDAANPEWRRV 349
W + G R + + +RLV+ GG+ + D F+L D + W V
Sbjct: 123 AWSRPRTTGTPPKPRIHHTLSIIDDRLVVVGGQSDTPGTAAIGDLFIL--DTRSLAWTEV 180
Query: 350 SVK----SSPPGRWGHTLSSLNGSWLVVFGGCGRQG-LLNDVFVLDLDAKQPTWIEVSG- 403
VK +S R H+ ++G L VFGG G LL D+ D ++ TW VS
Sbjct: 181 PVKGGISASQLARTRHSAEVVDGK-LYVFGGASASGALLQDLLAFDFASQ--TWSAVSQR 237
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSR 463
G+PP R+ HSS + G L GG +AG D + DL ++ W + P + PS
Sbjct: 238 GSPPPARAGHSSAAV-GKVLYFFGGQNNAGDAFDDLWAFDLAANE--WMQFP---NEPSL 291
Query: 464 LG--HSLSVYG-----RTKVLMFGGLAKSG 486
+G S S +G + K+ + GG+A +G
Sbjct: 292 MGPNPSASSFGGMCSLKGKLYVVGGVASTG 321
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 382 LLNDVFVLDLDAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTY 440
L D FVL A +W++++ G PP PR H+S KL GG AG++ +D Y
Sbjct: 58 LSADTFVLTT-AGLSSWVKLTVTGVPPPPRVAHASAY-SADKLFNWGGKVAAGIVDTDVY 115
Query: 441 LLDLTTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTID 499
+L+ T W T+ +PP R+ H+LS+ V++ G G + G+ + +D
Sbjct: 116 ILN--TVSKAWSRPRTTGTPPKPRIHHTLSIIDDRLVVVGGQSDTPGTAAI--GDLFILD 171
Query: 500 LGDEEPQWKQLECNAFTGV-GSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQL 558
W ++ G+ SQ A R H A + G++ +FGG+ A L
Sbjct: 172 T--RSLAWTEVPVKG--GISASQLA-----RTRHSA-EVVDGKLYVFGGASASGALLQDL 221
Query: 559 FLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVG 592
D + + +W ++ G PP GHS+ VG
Sbjct: 222 LAFDFASQ--TWSAVSQRGSPPPARAGHSSAAVG 253
>gi|344211121|ref|YP_004795441.1| HTR-like protein [Haloarcula hispanica ATCC 33960]
gi|343782476|gb|AEM56453.1| HTR-like protein [Haloarcula hispanica ATCC 33960]
Length = 726
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P V+ D D P+IY N + TGY E+LG+NCR LQ + DP
Sbjct: 281 PVGVVITDPGQTDNPLIYANDHYRDLTGYSLPELLGKNCRMLQGEN---------TDPES 331
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ +R ++ EL N++K+GT NR+R+AP+RDDDG V + +G Q
Sbjct: 332 VATMRDAIDAEERVTVELRNYRKNGTEFWNRVRIAPVRDDDGAVVNYVGFQ 382
>gi|270356844|gb|ACZ80633.1| putative blue light receptor or white collar 1 protein
[Filobasidiella depauperata]
Length = 1060
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
SF+V D D PI+Y + F TGY ++LG+NCRFLQ D + + D
Sbjct: 518 SFLVVDIRRYDSPIVYASPTFSKLTGYELPQILGKNCRFLQSPDGEVTKGSKRDFTDNEA 577
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VS +RR L+ G E Q L+N+K+ G P +N + + PI D + + +G QI
Sbjct: 578 VSLLRRSLDAGKECQTSLINYKRGGEPFINLVTVVPIPWDGIDIVYHVGFQI 629
>gi|448503726|ref|ZP_21613355.1| HTR-like protein [Halorubrum coriense DSM 10284]
gi|445691927|gb|ELZ44110.1| HTR-like protein [Halorubrum coriense DSM 10284]
Length = 594
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 103/229 (44%), Gaps = 30/229 (13%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P V D D P++YVN F TGY +E +G NCRFLQ P +
Sbjct: 268 PVGITVTDPEQEDNPMVYVNDRFVEMTGYDREESIGVNCRFLQ---------GPDTEEAS 318
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
V E+R ++ ELLN++KDGT NR+ +API D DG+VTH +G F E +
Sbjct: 319 VQELRDAIDADDPTTVELLNYRKDGTEFWNRVSIAPICDADGSVTHWVG---FQEDITEF 375
Query: 174 NHVSYPVFKENCNQQYDQSAQYFSGG-HSPLSQHQDICGILQLSDEVL--AHNILSRLTP 230
+ E N + D A S +PL+ Q G +QL+ ++ A N+ + L
Sbjct: 376 KQREAAL--ERQNDRLDSFASIVSHDLRNPLNVAQ---GRVQLARDLSDDAENLDAALDA 430
Query: 231 RDVASIGSVCRRIRQLTKN-------EHVR-KMVCQNAWGREVTGALEL 271
D + S+ R L + EHV V ++W TGA L
Sbjct: 431 LD--RMESIVERTLALAREGDTVGDPEHVDLADVADDSWSTVDTGAATL 477
>gi|422617051|ref|ZP_16685755.1| histidine kinase [Pseudomonas syringae pv. japonica str. M301072]
gi|330897435|gb|EGH28854.1| histidine kinase [Pseudomonas syringae pv. japonica str. M301072]
Length = 534
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 30 TTRMPMIVTDPNRPDNPIIFANQAFLEMTGYASEEIIGSNCRFLQ---------GPDTDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V IR +EE ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AAVQSIRDAVEERVDISTEILNYRKDGSSFWNALFISPVYNDAGDLIYFFASQL 134
>gi|374621544|ref|ZP_09694075.1| PAS sensor protein [Ectothiorhodospira sp. PHS-1]
gi|373940676|gb|EHQ51221.1| PAS sensor protein [Ectothiorhodospira sp. PHS-1]
Length = 150
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Query: 65 PDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEG 124
PD PI+Y N VFE TGY E++G NCRFLQ D R P + EIR+ L E
Sbjct: 36 PDNPIVYANAVFEHMTGYSRAEIIGHNCRFLQGED----REQP-----AIEEIRKALAER 86
Query: 125 IEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
E + L N++KDGT NRL + P+ D G + + +G+Q
Sbjct: 87 REVEVTLRNYRKDGTLFHNRLSIRPLFDASGKLIYFLGVQ 126
>gi|167648510|ref|YP_001686173.1| signal transduction histidine kinase [Caulobacter sp. K31]
gi|167350940|gb|ABZ73675.1| signal transduction histidine kinase [Caulobacter sp. K31]
Length = 369
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+V DA D PI++ N F TGY DEV+GRNCRFLQ + DP V
Sbjct: 35 MIVTDARQSDNPIVFANDAFLALTGYDLDEVIGRNCRFLQGLE---------TDPDQVDR 85
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIG 162
+R+ + +G E ELLN++KDG+ N L L+P+R + G V + G
Sbjct: 86 LRQAVAQGEEVALELLNYRKDGSTFWNALYLSPVRGETGEVLYFFG 131
>gi|448659232|ref|ZP_21683200.1| HTR-like protein [Haloarcula californiae ATCC 33799]
gi|445760734|gb|EMA11991.1| HTR-like protein [Haloarcula californiae ATCC 33799]
Length = 748
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 66 DFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGI 125
D PI Y N+ F TGY EV GRNCRFLQ A P V +R ++EG
Sbjct: 277 DTPITYANRRFLELTGYTESEVRGRNCRFLQ---GEATESEP------VDAMRAAIDEGE 327
Query: 126 EFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
EL N++KDGT N++ +AP+RDDDGTV + +G Q
Sbjct: 328 PVSVELRNYRKDGTMFWNQVSIAPVRDDDGTVVNYVGFQ 366
>gi|433638189|ref|YP_007283949.1| PAS domain S-box [Halovivax ruber XH-70]
gi|433289993|gb|AGB15816.1| PAS domain S-box [Halovivax ruber XH-70]
Length = 674
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P + D PD P++YVN FE TGY E +GRNCRFLQ P DP
Sbjct: 160 PVGIAITDPDRPDNPLVYVNDSFEALTGYGPSETIGRNCRFLQ---------GPETDPDA 210
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAK 170
V+++R ++ EL N++ DG NR+ +AP+ + G VTH +G Q A+
Sbjct: 211 VAKLRAAIDAAEPVAVELQNYRADGEVFWNRVEIAPVT-EHGQVTHFVGYQTDVTAR 266
>gi|90420418|ref|ZP_01228325.1| sensory box histidine kinase, possible photoreceptor [Aurantimonas
manganoxydans SI85-9A1]
gi|90335146|gb|EAS48899.1| sensory box histidine kinase, possible photoreceptor [Aurantimonas
manganoxydans SI85-9A1]
Length = 389
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T ++ D PD PII+ NK F+ GY DE++GRNCRFLQ P DP
Sbjct: 46 TRMPMIITDPRQPDNPIIFANKAFQDLIGYDRDEIIGRNCRFLQ---------GPDTDPT 96
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
V +R+ + +L N++KDG+ N L ++P+R +DG V Q+ +++
Sbjct: 97 EVDRLRQAIARKEPVNVQLRNYRKDGSAFWNSLYVSPVRGEDGDVQFFFASQLDMTERVE 156
Query: 173 LNHVSYPVFKENCNQQYD 190
+ KE+ Q D
Sbjct: 157 AEQ-ALARQKEDVEAQVD 173
>gi|448433144|ref|ZP_21585814.1| HTR-like protein [Halorubrum tebenquichense DSM 14210]
gi|445686546|gb|ELZ38863.1| HTR-like protein [Halorubrum tebenquichense DSM 14210]
Length = 1102
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
P + D D P++YVN F TGY +E +G NCRFLQ P +
Sbjct: 267 APVGITITDPQQDDNPMVYVNDRFVEMTGYDREESIGVNCRFLQG---------PDTEEA 317
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V ++R ++ ELLN++KDGT NR+ +API D DGTVTH +G Q
Sbjct: 318 SVQQLRDAIDADEPTSVELLNYRKDGTEFWNRVSIAPISDADGTVTHWVGFQ 369
>gi|121716497|ref|XP_001275825.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
gi|119403982|gb|EAW14399.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
Length = 614
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
F + D PD PII+ ++ F T Y D VLGRNCRFLQ P +P V
Sbjct: 284 FCLTDPSRPDNPIIFASEEFHRTTQYGMDYVLGRNCRFLQ---------GPKTNPNSVRR 334
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR +E G LN+++DG+P +N L+ AP+ D G + + IG QI
Sbjct: 335 IREAIEAGRHHSELFLNYRRDGSPFMNLLQCAPLCDSSGKIRYFIGAQI 383
>gi|448543401|ref|ZP_21624966.1| PAS-PAC-PAC sensing histidine kinase [Haloferax sp. ATCC BAA-646]
gi|448550427|ref|ZP_21628806.1| PAS-PAC-PAC sensing histidine kinase [Haloferax sp. ATCC BAA-645]
gi|448559347|ref|ZP_21633518.1| PAS-PAC-PAC sensing histidine kinase [Haloferax sp. ATCC BAA-644]
gi|445706538|gb|ELZ58416.1| PAS-PAC-PAC sensing histidine kinase [Haloferax sp. ATCC BAA-646]
gi|445711358|gb|ELZ63151.1| PAS-PAC-PAC sensing histidine kinase [Haloferax sp. ATCC BAA-644]
gi|445711428|gb|ELZ63220.1| PAS-PAC-PAC sensing histidine kinase [Haloferax sp. ATCC BAA-645]
Length = 858
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 10/99 (10%)
Query: 66 DFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGI 125
D P+ YVN FE TGY + EV+GRNCRFLQ D DP V + ++ G
Sbjct: 165 DQPLTYVNDAFEEMTGYDSSEVIGRNCRFLQGDD---------TDPEAVETLHEAVDAGE 215
Query: 126 EFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
L N++KDGTP N L+++P+ DDG +TH +G Q
Sbjct: 216 SAAVGLTNYRKDGTPFWNDLKISPVY-DDGELTHFVGFQ 253
>gi|193676271|ref|XP_001947955.1| PREDICTED: kelch domain-containing protein 3-like [Acyrthosiphon
pisum]
Length = 407
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 129/319 (40%), Gaps = 32/319 (10%)
Query: 296 FTVRGAVEPSRCNFSACAAGNRLVLFGG--EGVNMQPMDDTFVLNLDAANPEWRRVSVKS 353
+TV P R N +A A G + FGG GV+ + + LD +W ++ + +
Sbjct: 3 WTVHTYGGPRRVNHAAVAIGTSIFTFGGYCSGVDYKKFKPIDIHILDTEKLKWWKLELNN 62
Query: 354 S-----PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPL 408
P R+GHT +L GS + ++GG + N ++ + + + T V G P
Sbjct: 63 QDCSCVPFQRYGHTAINL-GSNIYLWGGRNDNRVCNTLYCFNTETLKWTTPSVYGNKPE- 120
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSL 468
PR HS+CII+ + G +G+ SD Y+L+L + +W I T PPS
Sbjct: 121 PRDGHSACIIQNCMYIFGGFEERSGLFASDLYMLNLNS--MVWSIIKTKGRPPSYRDFHT 178
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTID---LGDEEPQWKQLECNAFTGVGSQSAVV 525
+ K+ +FGG + R + Y D L QW + + + V
Sbjct: 179 ATAIDNKMYIFGGRSDWAAPRQTDKDKYCSDIYYLDTSRRQWIRPKVH---------GVK 229
Query: 526 PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKP---SWRILNVPGQPPKF 582
P R H A G IFG G + L D + P +W + G PP
Sbjct: 230 PIARRSHSAFVYN-GLFYIFG----GFNKNKDLHFQDINRYDPVSSTWMKILPKGTPP-C 283
Query: 583 AWGHSTCVVGGTRVLVLGG 601
A C + R+ + GG
Sbjct: 284 ARRRQICQLVNDRIFISGG 302
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 19/207 (9%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGG-EGVNMQPMDDTFVLNLDAANPEWR 347
E + W +V G R SAC N + +FGG E + D ++LNL++ W
Sbjct: 105 ETLKWTTPSVYGNKPEPRDGHSACIIQNCMYIFGGFEERSGLFASDLYMLNLNSM--VWS 162
Query: 348 RVSVKSSPPG-RWGHTLSSLNGSWLVVFGG---------CGRQGLLNDVFVLDLDAKQPT 397
+ K PP R HT ++++ + +FGG + +D++ LD +Q
Sbjct: 163 IIKTKGRPPSYRDFHTATAIDNK-MYIFGGRSDWAAPRQTDKDKYCSDIYYLDTSRRQ-- 219
Query: 398 WIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPT 456
WI G P+ R HS+ + G + G + + D D + W +I
Sbjct: 220 WIRPKVHGVKPIARRSHSAFVYNGLFYIFGGFNKNKDLHFQDINRYDPVSST--WMKILP 277
Query: 457 SWSPPSRLGHSLSVYGRTKVLMFGGLA 483
+PP + ++ + GG +
Sbjct: 278 KGTPPCARRRQICQLVNDRIFISGGTS 304
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 10/154 (6%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGE---GVNMQPMDDTF---VLN 338
+ L ++ W +G R +A A N++ +FGG Q D + +
Sbjct: 153 MLNLNSMVWSIIKTKGRPPSYRDFHTATAIDNKMYIFGGRSDWAAPRQTDKDKYCSDIYY 212
Query: 339 LDAANPEWRRVSVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPT 397
LD + +W R V P R H+ NG +FGG + L+ + D T
Sbjct: 213 LDTSRRQWIRPKVHGVKPIARRSHSAFVYNGL-FYIFGGFNKNKDLHFQDINRYDPVSST 271
Query: 398 WIEV-SGGAPPLPRSWHSSCIIEGSKLVVSGGCT 430
W+++ G PP R C + ++ +SGG +
Sbjct: 272 WMKILPKGTPPCARR-RQICQLVNDRIFISGGTS 304
>gi|335438286|ref|ZP_08561034.1| bacterio-opsin activator [Halorhabdus tiamatea SARL4B]
gi|334892480|gb|EGM30713.1| bacterio-opsin activator [Halorhabdus tiamatea SARL4B]
Length = 677
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P + DA PD P+IYVN F TGY +E +G NCRFLQ + A+
Sbjct: 161 PVGITIGDATVPDKPLIYVNDSFVEMTGYDKEEAIGVNCRFLQGEETDAE---------T 211
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++R + + ELLN++ DG+ N L ++PIRD+DG VT+ +G Q
Sbjct: 212 TLQLREAVRDQESAALELLNYRADGSTFWNNLEISPIRDEDGNVTNFVGFQ 262
>gi|168016775|ref|XP_001760924.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687933|gb|EDQ74313.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 617
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 15/201 (7%)
Query: 288 LEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWR 347
LE CW + T +G + +R S AG+ L++FGGE Q ++D +L+L + W
Sbjct: 96 LEMECWTRITAKGEIPAARSGQSVTRAGSILIMFGGETPKGQKLNDLHILDLKSLM--WL 153
Query: 348 RVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV-SGGA 405
+ S P R H + + +L++FGG + LND+F LD + + W ++ + G
Sbjct: 154 PLHTSGSGPSPRTKHCAAMYDDRYLLIFGGASKSKPLNDLFALDFETME--WSKMKTKGI 211
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP--TSWSPPSR 463
P PRS H+ ++ G K ++GG T G ++T +LD+ W I T+ +P +
Sbjct: 212 TPSPRSGHAGILV-GDKWYIAGGETR-GHGSTETLMLDVAN--LTWSGIAATTANTPVAN 267
Query: 464 LGHSLSVYGR---TKVLMFGG 481
G SL + R T ++ FGG
Sbjct: 268 QGLSLVLVQRKEKTMLVAFGG 288
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 28/219 (12%)
Query: 350 SVKSSPPGRW----GHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG-G 404
++K+S PG GH+L S G +++ GG G + V V D + W ++ G
Sbjct: 51 NLKASTPGPLPLCRGHSLISW-GKTVLLIGGELNPGS-DRVEVWSFDLEMECWTRITAKG 108
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-R 463
P RS S GS L++ GG T G L+D ++LDL + MW + TS S PS R
Sbjct: 109 EIPAARSGQS-VTRAGSILIMFGGETPKGQKLNDLHILDLKS--LMWLPLHTSGSGPSPR 165
Query: 464 LGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSA 523
H ++Y +L+FGG +KS L + + +D E +W +++ T
Sbjct: 166 TKHCAAMYDDRYLLIFGGASKSKPL----NDLFALDF--ETMEWSKMKTKGIT------- 212
Query: 524 VVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD 562
P PR H + + + I GG G H ++ +LD
Sbjct: 213 --PSPRSGHAGI-LVGDKWYIAGGETRG-HGSTETLMLD 247
>gi|302807305|ref|XP_002985365.1| hypothetical protein SELMODRAFT_424453 [Selaginella moellendorffii]
gi|300146828|gb|EFJ13495.1| hypothetical protein SELMODRAFT_424453 [Selaginella moellendorffii]
Length = 612
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 127/272 (46%), Gaps = 34/272 (12%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPTWIE-VSGGAPPLPRSW 412
P +WGHT +++ + + +FGGCGR + NDV V D+ TW + V G P PR
Sbjct: 195 PGCKWGHTCNAVR-NLIYIFGGCGRDECQTNDVHVFDIGTH--TWSKPVMKGTHPSPRDS 251
Query: 413 HSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD---KP-MWREIPTSWSPPSRLGHSL 468
HSS + GSKL V GG TD +D ++LD T+ KP ++ ++P + GHS
Sbjct: 252 HSSMAV-GSKLYVFGG-TDGSNPPNDLFVLDTATNTWGKPDVFGDVPA-----PKEGHSA 304
Query: 469 SVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVG-SQSAVVPP 527
+ G + +FGG KS S E Y DL L N F S + V P
Sbjct: 305 LLIG-DNLFVFGGCGKSSD---PSEEEYYNDL-------HVLNANTFVWKKISITGVSPI 353
Query: 528 PRLDHVAVSMP-CGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGH 586
PR H S C I+ GG G + + +LD E +WR + G H
Sbjct: 354 PRDSHTCSSYKNC--FIVMGGEDGGNAYLNDVHILD--TETMAWREVKTTGAELMPRAEH 409
Query: 587 STCVVGGTRVLVLGGHTGEEWVLNELHELCLA 618
+T + G ++V GG + + + N++H L L+
Sbjct: 410 TT-ISHGKYLVVFGGFSDDRKLFNDVHTLDLS 440
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE---WRRV 349
W K V G V + SA G+ L +FGG G + P ++ + +L N W+++
Sbjct: 286 WGKPDVFGDVPAPKEGHSALLIGDNLFVFGGCGKSSDPSEEEYYNDLHVLNANTFVWKKI 345
Query: 350 SVKS-SPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV-SGGAPP 407
S+ SP R HT SS ++V+ G G LNDV +LD + W EV + GA
Sbjct: 346 SITGVSPIPRDSHTCSSYKNCFIVMGGEDGGNAYLNDVHILDTETM--AWREVKTTGAEL 403
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTD 447
+PR+ H++ I G LVV GG +D L +D + LDL+ D
Sbjct: 404 MPRAEHTT-ISHGKYLVVFGGFSDDRKLFNDVHTLDLSLD 442
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 225 LSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARE 284
SRL PR L ++ +++ + WG L+ G GR +
Sbjct: 177 FSRLEPR--------------LESSDQLQQQLPGCKWGHTCNAVRNLIYIFGGCGRDECQ 222
Query: 285 LTTLEAV-----CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGG-EGVNMQPMDDTFVLN 338
+ W K ++G R + S+ A G++L +FGG +G N P +D FV
Sbjct: 223 TNDVHVFDIGTHTWSKPVMKGTHPSPRDSHSSMAVGSKLYVFGGTDGSN--PPNDLFV-- 278
Query: 339 LDAANPEWRRVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGR------QGLLNDVFVLDL 391
LD A W + V P + GH+ + L G L VFGGCG+ + ND+ V L
Sbjct: 279 LDTATNTWGKPDVFGDVPAPKEGHS-ALLIGDNLFVFGGCGKSSDPSEEEYYNDLHV--L 335
Query: 392 DAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPM 450
+A W ++S G P+PR H +C + +V GG L+D ++LD T+
Sbjct: 336 NANTFVWKKISITGVSPIPRDSH-TCSSYKNCFIVMGGEDGGNAYLNDVHILD--TETMA 392
Query: 451 WREIPTSWSP-PSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDL 500
WRE+ T+ + R H+ +G+ +++FGG + L + +T+DL
Sbjct: 393 WREVKTTGAELMPRAEHTTISHGKY-LVVFGGFSDDRKL---FNDVHTLDL 439
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 103/245 (42%), Gaps = 28/245 (11%)
Query: 307 CNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSL 366
CN A N + +FGG G + +D V D W + +K + P S
Sbjct: 203 CN----AVRNLIYIFGGCGRDECQTNDVHVF--DIGTHTWSKPVMKGTHPSPRDSHSSMA 256
Query: 367 NGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVS 426
GS L VFGG ND+FVLD +V G P P+ HS+ +I G L V
Sbjct: 257 VGSKLYVFGGTDGSNPPNDLFVLDTATNTWGKPDVFGDVPA-PKEGHSALLI-GDNLFVF 314
Query: 427 GGCTDAGVLLSDTYLLD---LTTDKPMWREIP-TSWSPPSRLGHSLSVYGRTKVLMFGGL 482
GGC + + Y D L + +W++I T SP R H+ S Y ++M G
Sbjct: 315 GGCGKSSDPSEEEYYNDLHVLNANTFVWKKISITGVSPIPRDSHTCSSYKNCFIVMGGED 374
Query: 483 AKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRI 542
+ +L + + +D E W++++ TG PR +H +S +
Sbjct: 375 GGNAYL----NDVHILDT--ETMAWREVKT---TGAELM------PRAEHTTISH-GKYL 418
Query: 543 IIFGG 547
++FGG
Sbjct: 419 VVFGG 423
>gi|70947316|ref|XP_743286.1| protein serine/threonine phosphatase [Plasmodium chabaudi chabaudi]
gi|56522709|emb|CAH81695.1| protein serine/threonine phosphatase, putative [Plasmodium chabaudi
chabaudi]
Length = 806
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 125/261 (47%), Gaps = 30/261 (11%)
Query: 355 PPGRWGHTLSSLNGSWLVVFGGC----GRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPR 410
P R+GHT + L + + +FGG G+ + +D+++ DL Q W ++ P R
Sbjct: 22 PVPRFGHTATYLGNNKVAIFGGAIGDAGKYNITDDIYLYDL--TQNKWKKLITENTPTAR 79
Query: 411 SWHSSCIIEGSKLVVSGGCTDAGVL-LSDTYLLDLTTD-KPMWREIPTS-WSPPSRLGHS 467
+ H++ ++ +LV+ GG T G L L D Y+LDL D K W +PT SP R GH
Sbjct: 80 AAHAAACVDEQQLVIYGGATGGGSLSLDDLYILDLRRDQKYSWMTVPTKGVSPGRRYGHV 139
Query: 468 LSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPP 527
+ VY + +++FGG G L +++ E W Q+ + S ++ +P
Sbjct: 140 M-VYSKPNLIVFGG--NDGQNTLNDVWFMHVEMPPFE--WIQV-------IISNNSKIPS 187
Query: 528 PRLDHVAVSM----PCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVP---GQPP 580
PR+ H A G I+IFGG + S + + L + W + P G P
Sbjct: 188 PRVYHSADMCKEGPATGMIVIFGGRNSDNKSLNDTWGLRQHIDG-RWDWVEAPIKKGSPT 246
Query: 581 KFAWGHSTCVVGGTRVLVLGG 601
+ + H TCV G+++ VLGG
Sbjct: 247 QARYQH-TCVFIGSKMFVLGG 266
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGE-GVNMQPMDDTFVLNLDAAN 343
L L W+K + +AC +LV++GG G +DD ++L+L
Sbjct: 59 LYDLTQNKWKKLITENTPTARAAHAAACVDEQQLVIYGGATGGGSLSLDDLYILDLRRDQ 118
Query: 344 P-EWRRVSVKSSPPGR-WGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV 401
W V K PGR +GH + + L+VFGG Q LNDV+ + ++ WI+V
Sbjct: 119 KYSWMTVPTKGVSPGRRYGHVMVYSKPN-LIVFGGNDGQNTLNDVWFMHVEMPPFEWIQV 177
Query: 402 ---SGGAPPLPRSWHSSCIIE----GSKLVVSGGCTDAGVLLSDTYLLDLTTD-KPMWRE 453
+ P PR +HS+ + + +V+ GG L+DT+ L D + W E
Sbjct: 178 IISNNSKIPSPRVYHSADMCKEGPATGMIVIFGGRNSDNKSLNDTWGLRQHIDGRWDWVE 237
Query: 454 IPTSWSPPS--RLGHSLSVYGRTKVLMFGGLAKSG 486
P P+ R H+ G +K+ + GG +G
Sbjct: 238 APIKKGSPTQARYQHTCVFIG-SKMFVLGGRNDNG 271
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 143/345 (41%), Gaps = 44/345 (12%)
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGN-RLVLFGG---EGVNMQPMDDTFVLNLDAANPEW 346
VC RK +G + R +A GN ++ +FGG + DD ++ +L +W
Sbjct: 11 VC-RKEKQKGDIPVPRFGHTATYLGNNKVAIFGGAIGDAGKYNITDDIYLYDL--TQNKW 67
Query: 347 RRVSVKSSPPGRWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQP-TWIEV-S 402
+++ +++P R H + ++ LV++GG G L+D+++LDL Q +W+ V +
Sbjct: 68 KKLITENTPTARAAHAAACVDEQQLVIYGGATGGGSLSLDDLYILDLRRDQKYSWMTVPT 127
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS--- 459
G P R H + L+V GG D L+D + + + W ++ S +
Sbjct: 128 KGVSPGRRYGH-VMVYSKPNLIVFGG-NDGQNTLNDVWFMHVEMPPFEWIQVIISNNSKI 185
Query: 460 PPSRLGHSLSVY----GRTKVLMFGGL-AKSGHLRLRSGESYTIDLGDEEPQWKQLECNA 514
P R+ HS + +++FGG + + L G ID +W +E
Sbjct: 186 PSPRVYHSADMCKEGPATGMIVIFGGRNSDNKSLNDTWGLRQHID-----GRWDWVEAPI 240
Query: 515 FTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILN 574
G +Q+ R H V + ++ G + G P L + E W
Sbjct: 241 KKGSPTQA------RYQHTCVFIGSKMFVLGGRNDNGCSVPLSTALYN--TETIEWVTF- 291
Query: 575 VPGQPPKFAWGHSTCVVGGTRVLVLGG--HTGEEWVLNELHELCL 617
PP + H++ + T + GG H +++ NEL CL
Sbjct: 292 ----PPIAKFRHTSWMYKYT-IYTFGGFSHQTQQYPTNELE--CL 329
>gi|407918006|gb|EKG11304.1| PAS domain-containing protein [Macrophomina phaseolina MS6]
Length = 693
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+ + D PD PI+Y ++ F + T Y D V+GRNCRFLQ P P V
Sbjct: 218 YCLTDPSLPDNPIVYASEEFHLATQYGRDYVIGRNCRFLQ---------GPKTAPDSVRR 268
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR + G E LLN+++DG+P +N +AP+ D+ G V + IG QI
Sbjct: 269 IREAIRSGQEICEILLNYRRDGSPFINLCLVAPLYDNKGNVRYFIGCQI 317
>gi|55380223|ref|YP_138072.1| light- and oxygen-sensing histidine kinase [Haloarcula marismortui
ATCC 43049]
gi|55232948|gb|AAV48366.1| putative 22-domain light- and oxygen-sensing histidine kinase
[Haloarcula marismortui ATCC 43049]
Length = 2306
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 40 ELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD 99
EL+LK + T + D D P++YVN FE TGY A++ LGRN RFLQ D
Sbjct: 652 ELALKNRAMDEATV--GIQITDPTQADNPLVYVNDGFERMTGYTAEDALGRNPRFLQGAD 709
Query: 100 PRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTH 159
DP V+ +R ++ EL N++KDGTP RL + P+ ++GTVT+
Sbjct: 710 ---------TDPEQVARLREAIDADEPVSVELKNYRKDGTPYWARLSITPVTGENGTVTN 760
Query: 160 IIGIQ 164
+GIQ
Sbjct: 761 YVGIQ 765
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 58/104 (55%), Gaps = 12/104 (11%)
Query: 64 DPDF---PIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRC 120
DPD P++YVN F TGY +E LGRNCRFLQ RD R D + E+R+
Sbjct: 1475 DPDREGNPLVYVNDGFVDQTGYSREEALGRNCRFLQ-RDDR--------DQSALDELRKA 1525
Query: 121 LEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ EL N++KDG NRL + PI DD GT+ + IGIQ
Sbjct: 1526 IASEEPSIVELRNYRKDGEQFWNRLSVTPIYDDVGTLANYIGIQ 1569
>gi|242345215|dbj|BAH80321.1| aureochrome2-like protein [Fucus distichus subsp. evanescens]
Length = 409
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SF V D PD PI+Y + F TGY +VLGRNCRFLQ P DP V+
Sbjct: 256 SFCVTDPQLPDNPIVYASNTFIELTGYDRSQVLGRNCRFLQ---------GPDTDPDAVA 306
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+IR+ +EEG + L +K DGT N + +A +R++D + + +GIQ
Sbjct: 307 KIRKGIEEGKDTSVFLRQYKADGTVFWNHVFVAALRNNDHKIINYVGIQ 355
>gi|448540586|ref|ZP_21623596.1| HTR-like protein [Haloferax sp. ATCC BAA-646]
gi|448547503|ref|ZP_21626924.1| HTR-like protein [Haloferax sp. ATCC BAA-645]
gi|448556428|ref|ZP_21632039.1| HTR-like protein [Haloferax sp. ATCC BAA-644]
gi|445709220|gb|ELZ61052.1| HTR-like protein [Haloferax sp. ATCC BAA-646]
gi|445715873|gb|ELZ67625.1| HTR-like protein [Haloferax sp. ATCC BAA-645]
gi|445716456|gb|ELZ68198.1| HTR-like protein [Haloferax sp. ATCC BAA-644]
Length = 397
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
+ V D PD PI+Y+N FE TGY A+ V GRN RFL P DP V
Sbjct: 276 VAIVAIDPSRPDNPIVYLNAAFETLTGYDAESVTGRNYRFLC---------GPETDPETV 326
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
+E+RR ++ G E+ N+ G P V+RL + P+RDD+G +
Sbjct: 327 AEVRRAVDAGESISTEIRNYDAHGDPFVSRLDIRPVRDDNGAL 369
>gi|340780976|ref|YP_004747583.1| PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase [Acidithiobacillus caldus
SM-1]
gi|340555129|gb|AEK56883.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Acidithiobacillus caldus SM-1]
Length = 913
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D + ++Y N F +GY ++LG+NCRFLQ P DP + L E
Sbjct: 145 DAEQRVVYANPAFLRLSGYELADILGKNCRFLQ---------GPDTDPATRQSLHDALAE 195
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G F G++LN+++DGTP N L ++P+RD G +TH + +Q
Sbjct: 196 GRVFHGDILNYRRDGTPFWNALNISPVRDAQGHITHFVSVQ 236
>gi|46202891|ref|ZP_00052432.2| COG2202: FOG: PAS/PAC domain [Magnetospirillum magnetotacticum
MS-1]
Length = 667
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 35 GGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRF 94
G D+ L L +L +AD PD P+IYVN FE TGY A LGRN RF
Sbjct: 326 GRDEARLRLSDMVL--SNVSNGVTIADVSGPDMPLIYVNPAFEHITGYAAQNALGRNARF 383
Query: 95 LQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDD 154
L DP + + +IR L EG + N + DGT N+L L+P+R +
Sbjct: 384 LHEFDPAQEG---------LDDIRAALAEGRPVTVVVRNQRADGTLFWNQLSLSPLRGTN 434
Query: 155 GTVTHIIGIQ 164
G +TH +G+Q
Sbjct: 435 GALTHWVGVQ 444
>gi|291001047|ref|XP_002683090.1| predicted protein [Naegleria gruberi]
gi|284096719|gb|EFC50346.1| predicted protein [Naegleria gruberi]
Length = 1021
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 293 WRKFTVRGAVEP-SRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
W + V P +R +F+ ++ FGG + +D ++L+L + +W + +
Sbjct: 178 WSRILVDNDQAPRARRDFTCTKIDQKIYFFGGISDSGIIHNDMYILDL--IDLKWSKCTF 235
Query: 352 KS---SPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPL 408
KS P R+GH+ + L+ ++++FGG G + ND+++ ++ +K+ + +E+ PL
Sbjct: 236 KSEDDKPTARYGHSATVLDSEYILIFGGSGYETKFNDLYLFNIFSKEWSLLEI--DECPL 293
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSL 468
RS HS + ++ +V G +L+D ++LD+ ++ W +I ++P R H
Sbjct: 294 ARSHHS--FVRLNEFIVLFGGEGEESILNDLFILDI--EESRWEKIENDFNPSPRFKHFC 349
Query: 469 SVYGRTKVLMFGG 481
++ L+F G
Sbjct: 350 GLFSSQDSLVFFG 362
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 13/172 (7%)
Query: 293 WRKFTVRGAVEP--SRCNFSACAAGNRLVL-FGGEGVNMQPMDDTFVLNLDAANPEWRRV 349
W K T + + +R SA + +L FGG G + +D ++ N+ + EW +
Sbjct: 230 WSKCTFKSEDDKPTARYGHSATVLDSEYILIFGGSGYETK-FNDLYLFNI--FSKEWSLL 286
Query: 350 SVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLP 409
+ P R H+ LN ++V+FGG G + +LND+F+LD++ + W ++ P P
Sbjct: 287 EIDECPLARSHHSFVRLN-EFIVLFGGEGEESILNDLFILDIE--ESRWEKIENDFNPSP 343
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPP 461
R H + +V G + L D Y L D E+ +S P
Sbjct: 344 RFKHFCGLFSSQDSLVFFGGENGSENLFDIYTLHAEDD----NEVELIYSSP 391
>gi|145476369|ref|XP_001424207.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391270|emb|CAK56809.1| unnamed protein product [Paramecium tetraurelia]
Length = 544
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 129/306 (42%), Gaps = 40/306 (13%)
Query: 293 WRKFTVRGAVEPSRCNFSAC--AAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVS 350
W+ +G RC S + N + +GG+ + + D + L+ N W+R+
Sbjct: 60 WKVQQTQGRQPSPRCYHSGFYDESQNVIYYYGGQADKGRSLTDFYCLSFQ--NFVWKRLF 117
Query: 351 VKSSPPGRWGHTLSSLNGSWLVVFGG-CGRQGLL-NDVFVLDLDAKQPT-WIEVSG---- 403
+ SPP R HT+ L G ++FGG C + L+ NDV++ + A Q T E+ G
Sbjct: 118 LLESPPNRHNHTMCDLPGMEKIIFGGACLPEDLMYNDVWIFNYSAIQFTNQQEIPGAVAT 177
Query: 404 -----GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI-PTS 457
G P PR H + + + + V G C+D T L L+ D W+ I
Sbjct: 178 KKNCKGEHPAPRQGHGAVVYQNNMFVFGGKCSD-----ETTQLYKLSLDNYQWKRILHLG 232
Query: 458 WSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTG 517
+P +R S S+ + V++FGG+ + L E+Y ++L D W + FT
Sbjct: 233 KAPGTRAFFSTSLI-KDNVIIFGGIDNVANKVL--NETYLLNLTDY--HW----SSPFT- 282
Query: 518 VGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPS--EEKPSWRILNV 575
+ +P PR H + + II+ G I + ++ L + W L
Sbjct: 283 ----AGPIPSPRYSHCSCQIE--DIILIMGGIEQTYCSMDMYFLSQGSINQNAEWEQLKE 336
Query: 576 PGQPPK 581
P + K
Sbjct: 337 PTELEK 342
>gi|145514185|ref|XP_001443003.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410364|emb|CAK75606.1| unnamed protein product [Paramecium tetraurelia]
Length = 430
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 135/310 (43%), Gaps = 61/310 (19%)
Query: 328 MQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQG------ 381
QP D + + N + R V + P R GH+ ++L+G+ +++FGG
Sbjct: 69 YQPFDQS-----RSGNGQNRSVLMGVPPCARGGHS-ATLSGASIILFGGHYYANKDEGYK 122
Query: 382 LLNDVFVLDLDAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTY 440
LND + +D++A + W + G PP PR HS+ ++ G ++++ GG + V D +
Sbjct: 123 YLNDTYQMDVNANR--WFKAKVQGTPPAPRYAHSA-VLAGQRIIIFGGKGEKCV-FRDLH 178
Query: 441 LLDLTTDKPMWREIPT-SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTID 499
LD T W + P S SP +R HS ++Y TK+++FGG + + Y +D
Sbjct: 179 ALDPLT--LTWYQGPEGSGSPSARFAHSATLYASTKMIIFGGWNGIDYFN----DLYVLD 232
Query: 500 LGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG------------ 547
L E W Q C + P PR H A+ + +II GG
Sbjct: 233 L--EVMAWSQPPC---------TGPSPTPRQGHTAIQV-GANLIIQGGFYYQEDKNLKNL 280
Query: 548 -SIAGLHSPSQL---FLLDP---SEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLG 600
A S L +L D E +W L V G PP +GHS V G ++V G
Sbjct: 281 PKTANPRHGSHLRGCYLNDIRILDTEHFAWSRLRVSGTPPAPRYGHSAN-VSGADIVVFG 339
Query: 601 GHTGEEWVLN 610
G W LN
Sbjct: 340 G-----WSLN 344
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 142/329 (43%), Gaps = 51/329 (15%)
Query: 305 SRCNFSACAAGNRLVLFGGEGV-----NMQPMDDTFVLNLDAANPEWRRVSVKSSPPG-R 358
+R SA +G ++LFGG + ++DT+ ++++A W + V+ +PP R
Sbjct: 93 ARGGHSATLSGASIILFGGHYYANKDEGYKYLNDTYQMDVNAN--RWFKAKVQGTPPAPR 150
Query: 359 WGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIE-VSGGAPPLPRSWHSSCI 417
+ H+ + L G +++FGG G + + D+ LD TW + G P R HS+ +
Sbjct: 151 YAHS-AVLAGQRIIIFGGKGEKCVFRDLHA--LDPLTLTWYQGPEGSGSPSARFAHSATL 207
Query: 418 IEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP-TSWSPPSRLGHSLSVYGRTKV 476
+K+++ GG +D Y+LDL + W + P T SP R GH+ G +
Sbjct: 208 YASTKMIIFGGWNGID-YFNDLYVLDL--EVMAWSQPPCTGPSPTPRQGHTAIQVGANLI 264
Query: 477 LMFG----------GLAKSGHLR----LRSGESYTIDLGDEEP-QWKQLECNAFTGVGSQ 521
+ G L K+ + R LR I + D E W +L
Sbjct: 265 IQGGFYYQEDKNLKNLPKTANPRHGSHLRGCYLNDIRILDTEHFAWSRLRV--------- 315
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGG--------SIAGLHSPSQL-FLLDPSEEKPSWRI 572
S P PR H A ++ I++FGG S +P + +L+ + EK W
Sbjct: 316 SGTPPAPRYGHSA-NVSGADIVVFGGWSLNSGARSENNFVTPPDIDYLIVLNTEKMCWEK 374
Query: 573 LNVPGQPPKFAWGHSTCVVGGTRVLVLGG 601
G P+ +GH+ + G +L+ GG
Sbjct: 375 AKYEGNAPRNRYGHTATSI-GPHILIFGG 402
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 124/292 (42%), Gaps = 53/292 (18%)
Query: 288 LEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWR 347
+ A W K V+G R SA AG R+++FGG+G D + LD W
Sbjct: 132 VNANRWFKAKVQGTPPAPRYAHSAVLAGQRIIIFGGKGEKCVFRD---LHALDPLTLTWY 188
Query: 348 RVSVKS-SPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
+ S SP R+ H+ + + +++FGG ND++VLDL+ W + P
Sbjct: 189 QGPEGSGSPSARFAHSATLYASTKMIIFGGWNGIDYFNDLYVLDLEVM--AWSQPPCTGP 246
Query: 407 -PLPRSWHSSCIIEGSKLVVSGGCTDA---------------------GVLLSDTYLLDL 444
P PR H++ + G+ L++ GG G L+D +LD
Sbjct: 247 SPTPRQGHTAIQV-GANLIIQGGFYYQEDKNLKNLPKTANPRHGSHLRGCYLNDIRILD- 304
Query: 445 TTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGE------SYT 497
T+ W + S +PP+ R GHS +V G +++FGG + + R + Y
Sbjct: 305 -TEHFAWSRLRVSGTPPAPRYGHSANVSG-ADIVVFGGWSLNSGARSENNFVTPPDIDYL 362
Query: 498 IDLGDEEPQWK--QLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG 547
I L E+ W+ + E NA P R H A S+ I+IFGG
Sbjct: 363 IVLNTEKMCWEKAKYEGNA-----------PRNRYGHTATSI-GPHILIFGG 402
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVN---------MQPMDDTFVLNL 339
E W + V G R SA +G +V+FGG +N + P D +++ L
Sbjct: 306 EHFAWSRLRVSGTPPAPRYGHSANVSGADIVVFGGWSLNSGARSENNFVTPPDIDYLIVL 365
Query: 340 DAANPEWRRVSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVL-DLD 392
+ W + + ++P R+GHT +S+ G +++FGG N V VL DL+
Sbjct: 366 NTEKMCWEKAKYEGNAPRNRYGHTATSI-GPHILIFGGWEYNRATNQVVVLRDLN 419
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 460 PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVG 519
P +R GHS ++ G + +++FGG H E Y L D Q++ NA
Sbjct: 91 PCARGGHSATLSGAS-IILFGG-----HYYANKDEGYKY-LNDT----YQMDVNANRWFK 139
Query: 520 SQSAVVPP-PRLDHVAVSMPCGRIIIFGGS-----IAGLHSPSQLFLLDPSEEKPSWRIL 573
++ PP PR H AV + RIIIFGG LH+ L L +W
Sbjct: 140 AKVQGTPPAPRYAHSAV-LAGQRIIIFGGKGEKCVFRDLHALDPLTL--------TWYQG 190
Query: 574 NVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCL 617
P + HS + T++++ GG G ++ N+L+ L L
Sbjct: 191 PEGSGSPSARFAHSATLYASTKMIIFGGWNGIDY-FNDLYVLDL 233
>gi|448535723|ref|ZP_21622243.1| HTR-like protein [Halorubrum hochstenium ATCC 700873]
gi|445703224|gb|ELZ55159.1| HTR-like protein [Halorubrum hochstenium ATCC 700873]
Length = 594
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
P + D D P++YVN F TGY +E +G NCRFLQ P +
Sbjct: 267 APVGITITDPQREDNPMVYVNDRFVEMTGYDREESIGVNCRFLQ---------GPDTEEA 317
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V ++R ++ ELLN++KDGT NR+ +API D DGTVTH +G Q
Sbjct: 318 SVQQLRDAIDADEPTSVELLNYRKDGTEFWNRVSIAPISDADGTVTHWVGFQ 369
>gi|448374219|ref|ZP_21558104.1| bacterio-opsin activator [Halovivax asiaticus JCM 14624]
gi|445660896|gb|ELZ13691.1| bacterio-opsin activator [Halovivax asiaticus JCM 14624]
Length = 674
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P + D PD P++YVN FE TGY E +GRNCRFLQ P D
Sbjct: 160 PVGIAITDPDRPDNPLVYVNDSFEALTGYSPSETIGRNCRFLQ---------GPETDLEA 210
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAK 170
++++R ++ EL N++ DG NR+ +AP+ +DG VTH +G Q A+
Sbjct: 211 IAKLRAAIDAAEPVAVELRNYRADGEVFWNRVEIAPVT-EDGQVTHFVGYQTDVTAR 266
>gi|90420751|ref|ZP_01228657.1| putative sensor histidine kinase/response regulator, possible
photoreceptor [Aurantimonas manganoxydans SI85-9A1]
gi|90335042|gb|EAS48803.1| putative sensor histidine kinase/response regulator, possible
photoreceptor [Aurantimonas manganoxydans SI85-9A1]
Length = 415
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P + V+ + D PI+Y N+ FE T Y AD V+GRNCRFLQ D DP
Sbjct: 27 PLALVLTNPNLDDNPIVYANRAFEKITRYSADAVIGRNCRFLQGDD---------TDPAQ 77
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V ++ + + E +F +++N++ DGT +NRL + P+ D++ + +G+Q
Sbjct: 78 VRQLAQAVREERDFSVDIVNYRSDGTRFLNRLMITPLYDEERHLQCFLGVQ 128
>gi|325919171|ref|ZP_08181226.1| PAS domain S-box [Xanthomonas gardneri ATCC 19865]
gi|325550341|gb|EGD21140.1| PAS domain S-box [Xanthomonas gardneri ATCC 19865]
Length = 180
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
Query: 66 DFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGI 125
D PI++ N+ F TGY ++EV+G NCRFLQ P DP V+E+R +
Sbjct: 12 DNPIVFANRAFLEMTGYSSEEVIGHNCRFLQ---------GPDTDPANVNEVRDSIANRR 62
Query: 126 EFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
F E+LN++KDG+P N L ++P+ DD G + + G Q+
Sbjct: 63 AFATEVLNYRKDGSPFWNALFVSPVFDDKGELVYFFGSQL 102
>gi|188580835|ref|YP_001924280.1| histidine kinase [Methylobacterium populi BJ001]
gi|179344333|gb|ACB79745.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium populi
BJ001]
Length = 541
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T +V D PD PII+ N+ F TGY DE++G NCRFLQ P D
Sbjct: 40 TRMPMIVTDPRQPDNPIIFANRAFIRMTGYTVDELIGNNCRFLQ---------GPDTDRD 90
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VS++R + E EF E+LN++KDG+ N L ++P+ + G + + G Q+
Sbjct: 91 TVSDVRDAIREHREFATEILNYRKDGSSFWNALFVSPVFNRSGDLVYFFGSQL 143
>gi|428215254|ref|YP_007088398.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Oscillatoria acuminata PCC 6304]
gi|428003635|gb|AFY84478.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Oscillatoria acuminata PCC 6304]
Length = 1288
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
+V + D ++YVN FE TGY + E G+NCRFLQ RD R P + E+
Sbjct: 736 IVISEYSQDNAVVYVNPSFEKMTGYSSAEATGQNCRFLQGRD----RHQP-----ALQEL 786
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R + G + + L N++KDGT N L L+P+ ++ G +TH IG+Q
Sbjct: 787 RNAIRNGQDCKVTLRNYRKDGTLFWNELSLSPVENERGAITHYIGVQ 833
>gi|257059911|ref|YP_003137799.1| response regulator receiver modulated diguanylate cyclase
[Cyanothece sp. PCC 8802]
gi|256590077|gb|ACV00964.1| response regulator receiver modulated diguanylate cyclase
[Cyanothece sp. PCC 8802]
Length = 481
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T ++ DA PD PIIYVN FE TGY +EV G+NCRFLQ D R P
Sbjct: 172 ATYNGIIITDATQPDNPIIYVNPGFERMTGYSLEEVKGKNCRFLQGND----RNQP---- 223
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ ++ CL+E + + N++KDG+ N + L+P++D+ G + + IG+Q
Sbjct: 224 -EILYMKTCLQEHRQCFITIRNYRKDGSMFWNEVSLSPVKDESGKLVYYIGVQ 275
>gi|449454133|ref|XP_004144810.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101218863 [Cucumis sativus]
Length = 585
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 129/293 (44%), Gaps = 37/293 (12%)
Query: 287 TLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW 346
L+ + W G R + A GN++++FGG + ++D +L+L EW
Sbjct: 34 NLDTMVWTNMVTTGQGPGPRDSHGALIVGNQMIVFGGTN-GSKKVNDLHILDL--GTKEW 90
Query: 347 RRVSVKSSPPG-RWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQPTWIEVSG 403
+ K +PP R HT + + LV+FGG G LND+ +LDL + IEV G
Sbjct: 91 VQPECKGNPPSPRESHTATLVGDDKLVIFGGSGEGESNYLNDLHILDLKSMVWMNIEVRG 150
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGG-CTD---AGVLLSDTYLLDLTTDKPMWREIPTSWS 459
P+PR HS+ + G KL V GG C D GV + D + L W ++ S
Sbjct: 151 DI-PVPRDSHSATAV-GHKLFVYGGDCGDRYQGGVDMLDVHSL-------TWSKLSVQGS 201
Query: 460 PPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGV 518
P R GH+ +V TKV + GG+ R +++ +DL W QL+
Sbjct: 202 SPGVRAGHA-AVNIATKVYILGGVGD----RQYYNDAWVLDLC--TCSWTQLDT-----C 249
Query: 519 GSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
G Q P R H AV + I I+GG + L +L E P+ R
Sbjct: 250 GQQ----PQGRFSHTAV-VADSDIAIYGGCGEDERPLNDLLVLQLGAEHPNGR 297
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 36/297 (12%)
Query: 331 MDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLD 390
D VLNLD W + PG + + G+ ++VFGG +ND+ +LD
Sbjct: 27 FSDVLVLNLDTM--VWTNMVTTGQGPGPRDSHGALIVGNQMIVFGGTNGSKKVNDLHILD 84
Query: 391 LDAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDA-GVLLSDTYLLDLTTDK 448
L K+ W++ G PP PR H++ ++ KLV+ GG + L+D ++LDL +
Sbjct: 85 LGTKE--WVQPECKGNPPSPRESHTATLVGDDKLVIFGGSGEGESNYLNDLHILDLKS-- 140
Query: 449 PMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYT--IDLGD-EE 504
+W I P R HS + G K+ ++GG G+ Y +D+ D
Sbjct: 141 MVWMNIEVRGDIPVPRDSHSATAVGH-KLFVYGG---------DCGDRYQGGVDMLDVHS 190
Query: 505 PQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPS 564
W +L + P R H AV++ ++ I GG + + ++LD
Sbjct: 191 LTWSKLSVQGSS---------PGVRAGHAAVNIAT-KVYILGG-VGDRQYYNDAWVLDLC 239
Query: 565 EEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
SW L+ GQ P+ + H T VV + + + GG +E LN+L L L ++
Sbjct: 240 --TCSWTQLDTCGQQPQGRFSH-TAVVADSDIAIYGGCGEDERPLNDLLVLQLGAEH 293
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 35/254 (13%)
Query: 373 VFGGCGRQGLLNDVFVLDLDAKQPTWIE-VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTD 431
VF GC +DV VL+LD W V+ G P PR H + I+ G++++V GG T+
Sbjct: 17 VFSGCCGGLHFSDVLVLNLDTM--VWTNMVTTGQGPGPRDSHGALIV-GNQMIVFGG-TN 72
Query: 432 AGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRL 490
++D ++LDL T + W + +PPS R H+ ++ G K+++FGG + L
Sbjct: 73 GSKKVNDLHILDLGTKE--WVQPECKGNPPSPRESHTATLVGDDKLVIFGGSGEGESNYL 130
Query: 491 RSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIA 550
+ + +DL + W +E +P PR H A ++ ++ ++GG
Sbjct: 131 N--DLHILDL--KSMVWMNIEVR---------GDIPVPRDSHSATAV-GHKLFVYGGD-C 175
Query: 551 GLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG-----HTGE 605
G + +LD +W L+V G P GH+ + T+V +LGG + +
Sbjct: 176 GDRYQGGVDMLD--VHSLTWSKLSVQGSSPGVRAGHAAVNI-ATKVYILGGVGDRQYYND 232
Query: 606 EWVLNELHELCLAS 619
WVL +LC S
Sbjct: 233 AWVL----DLCTCS 242
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ + ++ W K +V+G+ R +A ++ + GG G + Q +D +VL+L +
Sbjct: 184 DMLDVHSLTWSKLSVQGSSPGVRAGHAAVNIATKVYILGGVG-DRQYYNDAWVLDLCTCS 242
Query: 344 PEWRRV-SVKSSPPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ + P GR+ HT + + S + ++GGCG + LND+ VL L A+ P
Sbjct: 243 --WTQLDTCGQQPQGRFSHT-AVVADSDIAIYGGCGEDERPLNDLLVLQLGAEHPN 295
>gi|429191076|ref|YP_007176754.1| PAS domain-containing protein [Natronobacterium gregoryi SP2]
gi|448327353|ref|ZP_21516683.1| bacterio-opsin activator [Natronobacterium gregoryi SP2]
gi|429135294|gb|AFZ72305.1| PAS domain S-box [Natronobacterium gregoryi SP2]
gi|445608586|gb|ELY62420.1| bacterio-opsin activator [Natronobacterium gregoryi SP2]
Length = 616
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++Y+N + TGY D+V+GRNCR LQ P D
Sbjct: 125 PVGITISDPDREDNPLVYINDAYREITGYSYDDVVGRNCRLLQ---------GPDSDEET 175
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+ ++E E+ N++KDGT N + +AP+R+D+G VT+ +G Q
Sbjct: 176 IAEMAAAVDEDYPVTVEIKNYRKDGTEFWNEVTIAPVRNDEGEVTNYVGFQ 226
>gi|448308948|ref|ZP_21498819.1| PAS/PAC sensor signal transduction histidine kinase [Natronorubrum
bangense JCM 10635]
gi|445592334|gb|ELY46522.1| PAS/PAC sensor signal transduction histidine kinase [Natronorubrum
bangense JCM 10635]
Length = 480
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P +AD D P+IYVN F TGY DE+LG+NCRFLQ + R +
Sbjct: 24 PIGITIADPAKLDDPLIYVNDGFCELTGYPRDEILGQNCRFLQGENTREE---------P 74
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+++R +E EL N++KDG+ NR+ L PI+ + GTVTH +G Q
Sbjct: 75 VAKMRAAIEAEEPVTVELRNYRKDGSMFWNRVTLIPIQSESGTVTHYLGYQ 125
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
DP+ I YVN FE TGY A E GRN R L+ L + + E+
Sbjct: 156 DPEGTIEYVNPAFEHLTGYTAAEARGRNPRILKSGQQDELFYRELWETITAEEV------ 209
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++ EL N K G + ++ PI D DG +TH + I+
Sbjct: 210 ---WEAELTNRTKHGEIFEVKQKIVPITDSDGDITHFVAIE 247
>gi|399546031|ref|YP_006559339.1| two-component response regulator [Marinobacter sp. BSs20148]
gi|399161363|gb|AFP31926.1| Two-component response regulator [Marinobacter sp. BSs20148]
Length = 555
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 38 DTELSL-KPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ 96
D EL L K G+ +P V+ADA P+ P++Y N F TGY E++G + L
Sbjct: 296 DAELRLLKRGI---EASPNGIVMADARHPEMPMVYANPAFSEITGYTHSEIVGHSWHVLH 352
Query: 97 YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGT 156
+ P V I R L E EL+N++KDGTP N LR++P+ DD
Sbjct: 353 GEN---------TSPEAVEAIERGLRHQTEINVELINYRKDGTPFWNHLRVSPVFGDDSR 403
Query: 157 VTHIIGIQ 164
TH IG Q
Sbjct: 404 CTHFIGTQ 411
>gi|452846862|gb|EME48794.1| hypothetical protein DOTSEDRAFT_40078 [Dothistroma septosporum
NZE10]
Length = 658
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 51 PTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVD 110
P+ + + D PD PI+Y ++ F T Y + V+GRNCRFLQ P
Sbjct: 275 PSLAEVYCITDPSLPDNPIVYASEEFYNTTQYGQEYVIGRNCRFLQ---------GPQTS 325
Query: 111 PVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V + CL G E +LN+++DG+P +N L LAP+ D+ GTV + +G QI
Sbjct: 326 TAAVRRLIECLSRGEESCETILNYRRDGSPFMNLLMLAPMYDNKGTVRYFLGCQI 380
>gi|453080635|gb|EMF08685.1| hypothetical protein SEPMUDRAFT_151664 [Mycosphaerella populorum
SO2202]
Length = 1112
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPLVDP 111
+FVV DA DFPI+Y ++ FE TGY +LGRNCRFLQ D P +R++ VD
Sbjct: 441 AFVVCDAEKDDFPIVYCSENFERLTGYTKHMILGRNCRFLQSPDGNVVPGIRRKY--VDD 498
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +R + E Q L+N+++ G P +N L + PI D V +G Q+
Sbjct: 499 DSVLYLRNMVNLRREAQISLINYRRGGQPFMNLLTMIPITWDSDQVKFFVGFQV 552
>gi|302820934|ref|XP_002992132.1| hypothetical protein SELMODRAFT_134811 [Selaginella moellendorffii]
gi|300140058|gb|EFJ06787.1| hypothetical protein SELMODRAFT_134811 [Selaginella moellendorffii]
Length = 499
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 138/318 (43%), Gaps = 37/318 (11%)
Query: 308 NFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPG-RWGHTLSSL 366
+A G L LFGG G ++ + V D+ W + +K + P R HT +++
Sbjct: 25 TLTAVNNGKLLFLFGGYG----KIETSHVHVFDSVTKSWSKPFLKGTLPAPRDSHTCTAV 80
Query: 367 NGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVS 426
GS L VFGG L++++VLD T + SG P R HS+ ++ G L V
Sbjct: 81 -GSKLFVFGGTDGTSPLDELYVLDTTTYTWTKPDTSGDIPA-AREGHSAALV-GDDLYVF 137
Query: 427 GGCTDAG------VLLSDTYLLDLTTDKPMWREIPTSWSPP-SRLGHSLSVYGRTKVLMF 479
GGC V D Y L+T WR++ TS P SR HS+S +G K+++F
Sbjct: 138 GGCGKKKQGQAREVYYDDLYA--LSTTSCAWRKVLTSGPRPCSRDSHSMSSFG-NKLVLF 194
Query: 480 GGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPC 539
GG L + Y +D+G E W +LE V P PR H A +
Sbjct: 195 GG---EDVLNTYLADIYILDVGSLE--WSRLETR---------GVKPAPRAGHAAERI-G 239
Query: 540 GRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTR--VL 597
+IIFGG +++LD + W V G P + ++ ++ R V
Sbjct: 240 NNLIIFGGFADKRTLFDDVYVLDLLSGE--WHKPEVTGNGPSHRFSLASDLIDPERGVVA 297
Query: 598 VLGGHTGEEWVLNELHEL 615
+ GG GE L E+ L
Sbjct: 298 LYGGCNGELEALPEMFFL 315
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 147/328 (44%), Gaps = 45/328 (13%)
Query: 253 RKMVCQNAWGREVTGAL--ELMTKKLGWGRL-ARELTTLEAVC--WRKFTVRGAVEPSRC 307
R++ WG +T +L+ G+G++ + ++V W K ++G + R
Sbjct: 14 RRIRPGKRWGHTLTAVNNGKLLFLFGGYGKIETSHVHVFDSVTKSWSKPFLKGTLPAPRD 73
Query: 308 NFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSS-PPGRWGHTLSSL 366
+ + A G++L +FGG P+D+ +V LD W + P R GH+ ++L
Sbjct: 74 SHTCTAVGSKLFVFGGTD-GTSPLDELYV--LDTTTYTWTKPDTSGDIPAAREGHS-AAL 129
Query: 367 NGSWLVVFGGCG--RQGLLNDVFVLDLDAKQPT---WIEV-SGGAPPLPRSWHSSCIIEG 420
G L VFGGCG +QG +V+ DL A T W +V + G P R HS G
Sbjct: 130 VGDDLYVFGGCGKKKQGQAREVYYDDLYALSTTSCAWRKVLTSGPRPCSRDSHSMSSF-G 188
Query: 421 SKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSLSVYGRTKVLMF 479
+KLV+ GG L+D Y+LD+ + + W + T P+ R GH+ G +++F
Sbjct: 189 NKLVLFGGEDVLNTYLADIYILDVGSLE--WSRLETRGVKPAPRAGHAAERIG-NNLIIF 245
Query: 480 GGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ------SAVVPPPRLDHV 533
GG A R + Y +DL E W + E TG G S ++ P R
Sbjct: 246 GGFADK---RTLFDDVYVLDLLSGE--WHKPEV---TGNGPSHRFSLASDLIDPER---- 293
Query: 534 AVSMPCGRIIIFGGSIAGLHSPSQLFLL 561
G + ++GG L + ++F L
Sbjct: 294 ------GVVALYGGCNGELEALPEMFFL 315
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 29/273 (10%)
Query: 355 PPGRWGHTLSSL-NGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIE-VSGGAPPLPRSW 412
P RWGHTL+++ NG L +FGG G+ + V D+ +W + G P PR
Sbjct: 18 PGKRWGHTLTAVNNGKLLFLFGGYGK---IETSHVHVFDSVTKSWSKPFLKGTLPAPRDS 74
Query: 413 HSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-PPSRLGHSLSVY 471
H +C GSKL V GG TD L + Y+LD TT W + TS P +R GHS ++
Sbjct: 75 H-TCTAVGSKLFVFGG-TDGTSPLDELYVLDTTTY--TWTKPDTSGDIPAAREGHSAALV 130
Query: 472 GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPR-- 529
G + +FGG K + R E + L + T + + PR
Sbjct: 131 G-DDLYVFGGCGKKKQGQAR------------EVYYDDLYALSTTSCAWRKVLTSGPRPC 177
Query: 530 -LDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHST 588
D ++S ++++FGG + +++LD + W L G P GH+
Sbjct: 178 SRDSHSMSSFGNKLVLFGGEDVLNTYLADIYILDVGSLE--WSRLETRGVKPAPRAGHAA 235
Query: 589 CVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+G +++ GG + + ++++ L L S +
Sbjct: 236 ERIGNN-LIIFGGFADKRTLFDDVYVLDLLSGE 267
>gi|448667509|ref|ZP_21686009.1| HTR-like protein [Haloarcula amylolytica JCM 13557]
gi|445770077|gb|EMA21145.1| HTR-like protein [Haloarcula amylolytica JCM 13557]
Length = 727
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 10/112 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P V+ D D P+IY N + TGY E+LG+NCR LQ + DP
Sbjct: 281 PVGVVITDPGQTDNPLIYANDHYRDLTGYSLPELLGKNCRMLQGEN---------TDPES 331
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQ 164
V+ +R ++ EL N++KDGT NR+R+AP+R DDDGTV + +G Q
Sbjct: 332 VATMRDAIDAEERVTVELRNYRKDGTEFWNRVRIAPVRDDDDGTVVNYVGFQ 383
>gi|428312412|ref|YP_007123389.1| PAS domain-containing protein [Microcoleus sp. PCC 7113]
gi|428254024|gb|AFZ19983.1| PAS domain S-box [Microcoleus sp. PCC 7113]
Length = 1204
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ DA D + P++Y N FE TGY +EV+G+NCRFLQ D R P ++E
Sbjct: 580 IVITDATDSNHPLVYANPGFERITGYSVEEVMGQNCRFLQGTD----REQP-----ALTE 630
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R L++ E + L N++KDG+ N ++P+R+ G +TH IG+
Sbjct: 631 LRTALQQERECRVVLRNYRKDGSLFWNEFSISPVRNSAGILTHYIGVH 678
>gi|433420627|ref|ZP_20405563.1| HTR-like protein [Haloferax sp. BAB2207]
gi|432199112|gb|ELK55322.1| HTR-like protein [Haloferax sp. BAB2207]
Length = 393
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
+ VV D PD PI+Y+N FE TGY A+ V GR+ RFL P DP +V
Sbjct: 276 VAIVVIDPSRPDNPIVYLNAAFETLTGYDAESVTGRSYRFLC---------GPETDPEMV 326
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
+E+RR ++ G E+ N+ G P V+RL + P+RDD+G +
Sbjct: 327 AEVRRAVDAGESISTEIRNYDAHGDPFVSRLDIRPVRDDNGAL 369
>gi|402080108|gb|EJT75253.1| hypothetical protein GGTG_05190 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1119
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
+FVV D D PI+YV+ F+ TGY E+LG+NCRFLQ D + + + V+
Sbjct: 361 AFVVTDISLNDCPIVYVSSNFQNLTGYSQHEILGKNCRFLQAPDGQVEAGVKREFVEDHA 420
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + E E Q L+N++K G P +N L + PI + + + +G QI
Sbjct: 421 VFNLKKAIAERKEIQQSLINYRKGGKPFLNLLTMIPIPWETDELRYYVGFQI 472
>gi|410622291|ref|ZP_11333129.1| sigma-B regulation protein RsbU [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410158239|dbj|GAC28503.1| sigma-B regulation protein RsbU [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 408
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
+AD PD P+I+VN+ FE TGY+ +EVLGRNCRFLQ + + + PL S +
Sbjct: 28 TIADMQHPDLPLIFVNEGFEHTTGYKREEVLGRNCRFLQGANQELENQVPL------SVL 81
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
++ L L N+ K+G NRL L PI + + +TH +G+Q A+I
Sbjct: 82 KKALYNAESCTVLLKNYHKNGDLFWNRLSLTPIFNQEKILTHFVGVQTDITAEI 135
>gi|145509845|ref|XP_001440861.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408089|emb|CAK73464.1| unnamed protein product [Paramecium tetraurelia]
Length = 426
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 51/341 (14%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGV-----NMQPMDDTFVLNLDAANPEWR 347
W + + G +R SA +G ++LFGG + ++DT+ ++++A W
Sbjct: 78 WAEPLIEGVPPCARGGHSATLSGASIILFGGHYYANKDEGYKYLNDTYQMDVNAN--RWF 135
Query: 348 RVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIE-VSGGA 405
+ V+ +PP R+ H+ + L G +++FGG G + + D+ LD TW + G
Sbjct: 136 KAKVQGTPPAPRYAHS-AVLAGQRIIIFGGKGEKCVFRDLHA--LDPLTLTWYQGPEGSG 192
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP-TSWSPPSRL 464
P R HS+ + +K+++ GG +D Y+LDL + W + P T SP R
Sbjct: 193 SPSARFAHSATLYASTKMIIFGGWNGID-YFNDLYVLDL--EVMAWSQPPCTGPSPTPRQ 249
Query: 465 GHSLSVYGRTKVLMFG----------GLAKSGHLR----LRSGESYTIDLGDEEP-QWKQ 509
GH+ G ++ G L K+ + R LR I + D E W +
Sbjct: 250 GHTAIQVGANLIIQGGFYYQEDKTLKTLPKTANPRHGSHLRGCYLNDIRILDTEHFAWSR 309
Query: 510 LECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG--------SIAGLHSPSQL-FL 560
L S P PR H A ++ I++FGG S +P + +L
Sbjct: 310 LRV---------SGTPPAPRYGHSA-NVSGADIVVFGGWSLNSGARSENNFATPPDIDYL 359
Query: 561 LDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 601
+ + EK W G P+ +GH+ + G +L+ GG
Sbjct: 360 IVLNTEKMCWEKAKYEGNAPRNRYGHTATSI-GPHILIFGG 399
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 134/302 (44%), Gaps = 61/302 (20%)
Query: 339 LDAANPEWRRVSVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQG------LLNDVFVLDL 391
D +W ++ PP R GH+ ++L+G+ +++FGG LND + +D+
Sbjct: 71 FDQRKWQWAEPLIEGVPPCARGGHS-ATLSGASIILFGGHYYANKDEGYKYLNDTYQMDV 129
Query: 392 DAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPM 450
+A + W + G PP PR HS+ ++ G ++++ GG + V D + LD T
Sbjct: 130 NANR--WFKAKVQGTPPAPRYAHSA-VLAGQRIIIFGGKGEKCV-FRDLHALDPLT--LT 183
Query: 451 WREIPT-SWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQ 509
W + P S SP +R HS ++Y TK+++FGG + + Y +DL E W Q
Sbjct: 184 WYQGPEGSGSPSARFAHSATLYASTKMIIFGGWNGIDYFN----DLYVLDL--EVMAWSQ 237
Query: 510 LECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG----------SIAGLHSP---- 555
C + P PR H A+ + +II GG ++ +P
Sbjct: 238 PPC---------TGPSPTPRQGHTAIQV-GANLIIQGGFYYQEDKTLKTLPKTANPRHGS 287
Query: 556 -------SQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWV 608
+ + +LD E +W L V G PP +GHS V G ++V GG W
Sbjct: 288 HLRGCYLNDIRILD--TEHFAWSRLRVSGTPPAPRYGHSAN-VSGADIVVFGG-----WS 339
Query: 609 LN 610
LN
Sbjct: 340 LN 341
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVN---------MQPMDDTFVLNL 339
E W + V G R SA +G +V+FGG +N P D +++ L
Sbjct: 303 EHFAWSRLRVSGTPPAPRYGHSANVSGADIVVFGGWSLNSGARSENNFATPPDIDYLIVL 362
Query: 340 DAANPEWRRVSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVL-DLDAKQ 395
+ W + + ++P R+GHT +S+ G +++FGG N V VL DL+ Q
Sbjct: 363 NTEKMCWEKAKYEGNAPRNRYGHTATSI-GPHILIFGGWEYNRATNQVVVLRDLNVGQ 419
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 28/177 (15%)
Query: 448 KPMWREIPTSWSPP-SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQ 506
K W E PP +R GHS ++ G + +++FGG H E Y L D
Sbjct: 75 KWQWAEPLIEGVPPCARGGHSATLSGAS-IILFGG-----HYYANKDEGYKY-LNDT--- 124
Query: 507 WKQLECNAFTGVGSQSAVVPP-PRLDHVAVSMPCGRIIIFGGS-----IAGLHSPSQLFL 560
Q++ NA ++ PP PR H AV + RIIIFGG LH+ L L
Sbjct: 125 -YQMDVNANRWFKAKVQGTPPAPRYAHSAV-LAGQRIIIFGGKGEKCVFRDLHALDPLTL 182
Query: 561 LDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCL 617
+W P + HS + T++++ GG G ++ N+L+ L L
Sbjct: 183 --------TWYQGPEGSGSPSARFAHSATLYASTKMIIFGGWNGIDY-FNDLYVLDL 230
>gi|71018193|ref|XP_759327.1| hypothetical protein UM03180.1 [Ustilago maydis 521]
gi|46099177|gb|EAK84410.1| hypothetical protein UM03180.1 [Ustilago maydis 521]
Length = 1085
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 7/115 (6%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR----DPRAQRRHPLVDP 111
SF ++DA P P+IY ++ F TGY E+LG+NCRFLQ + A+R+H D
Sbjct: 414 SFAISDARHPQQPLIYASETFCHLTGYMLHEILGKNCRFLQTPGVPLEAGAERQH--TDN 471
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQI 165
V ++R L E Q L+N++KDG+P +N + + P+ D V ++G Q+
Sbjct: 472 RAVEHLKRHLTGFRECQASLINYRKDGSPFINLVTVVPVSWSDPSQVDFLVGFQV 526
>gi|452208293|ref|YP_007488415.1| receiver/sensor box protein [Natronomonas moolapensis 8.8.11]
gi|452084393|emb|CCQ37735.1| receiver/sensor box protein [Natronomonas moolapensis 8.8.11]
Length = 652
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+AD + D P++YVN+ FE TGY + LGRNCRFLQ D DP V+
Sbjct: 275 ITLADPSEADRPLVYVNEAFEEMTGYPPERTLGRNCRFLQGED---------TDPETVAA 325
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR +++ EL N++KDGT NRL + PI DDG + +G Q
Sbjct: 326 IRDAIDDEESISVELRNYRKDGTEFWNRLTVTPIY-DDGELVRYLGTQ 372
>gi|440745642|ref|ZP_20924932.1| histidine kinase [Pseudomonas syringae BRIP39023]
gi|440372275|gb|ELQ09083.1| histidine kinase [Pseudomonas syringae BRIP39023]
Length = 502
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+V D PD PII+ N+ F TGY ++E++G NCRFLQ P D VV
Sbjct: 3 MIVTDPNRPDNPIIFANRAFLEMTGYASEEIIGSNCRFLQ---------GPETDRAVVKS 53
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR ++E ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 54 IRDAIDERVDISTEILNYRKDGSTFWNALFISPVYNDAGDLIYFFASQL 102
>gi|399543355|ref|YP_006556663.1| two-component response regulator [Marinobacter sp. BSs20148]
gi|399158687|gb|AFP29250.1| Two-component response regulator [Marinobacter sp. BSs20148]
Length = 859
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 38 DTELSL-KPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ 96
D EL L K G+ +P V+ADA P+ P++Y N F TGY +E++G + L
Sbjct: 296 DAELRLLKRGI---EASPNGIVMADARHPEMPMVYANPAFSEITGYTHNEIVGHSWHVLH 352
Query: 97 YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGT 156
+ P V I R L E EL+N++KDG P N LR++P+ D DG
Sbjct: 353 GEN---------TSPEAVEAIERGLRHQTEINVELINYRKDGMPFWNHLRVSPVFDTDGL 403
Query: 157 VTHIIGIQ 164
TH IG Q
Sbjct: 404 CTHFIGHQ 411
>gi|354569046|ref|ZP_08988205.1| multi-sensor signal transduction histidine kinase [Fischerella sp.
JSC-11]
gi|353539050|gb|EHC08546.1| multi-sensor signal transduction histidine kinase [Fischerella sp.
JSC-11]
Length = 1039
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
V+ DA P+ PIIY N FE TGY +EV+GRN RFLQ D + E
Sbjct: 563 IVICDARLPNLPIIYANPAFEYITGYSPEEVIGRNFRFLQGNDTNQPE---------IQE 613
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R +++ L N++KDG+ N L ++P+ D DG TH +GIQ
Sbjct: 614 LRNAIQQAKNCTVILRNYRKDGSLFWNELSISPVFDADGNCTHYVGIQ 661
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 60 ADAFDPDF--PIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
ADA D I+YVN+ F +G+ + EV+G+ R LQ L D + I
Sbjct: 176 ADALDEPLGPQIVYVNEAFTRISGWSSAEVVGKTPRILQ---------GELSDRTQLDRI 226
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R L+ + + EL+N+ K+G+ + + PI D G +TH + IQ
Sbjct: 227 RTALQNCLPVRAELINYHKNGSTYWVEINIVPIADAQGKITHFVSIQ 273
>gi|193215252|ref|YP_001996451.1| PAS/PAC sensor hybrid histidine kinase [Chloroherpeton thalassium
ATCC 35110]
gi|193088729|gb|ACF14004.1| PAS/PAC sensor hybrid histidine kinase [Chloroherpeton thalassium
ATCC 35110]
Length = 1333
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 39 TELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR 98
E +LK + + ++ DA D+PIIYVN FE TGY E++GRN RFL
Sbjct: 513 VEDALKLHVSAIEASQNGIMIVDAMLEDYPIIYVNPRFEAVTGYEGCEIMGRNPRFLHGE 572
Query: 99 DPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVT 158
D V + +IR + G L N+KKDG+ N L ++PI D+DGTVT
Sbjct: 573 D---------VSQPDLEKIRYAMRHGKPCTVLLKNYKKDGSLFWNELTISPISDNDGTVT 623
Query: 159 HIIGIQIFSEAKIDLNHVSYPVF-KENCNQ 187
H +G N +S +F EN N+
Sbjct: 624 HFVGTT---------NDISERIFSNENLNK 644
>gi|121704672|ref|XP_001270599.1| GATA transcription factor LreA [Aspergillus clavatus NRRL 1]
gi|119398745|gb|EAW09173.1| GATA transcription factor LreA [Aspergillus clavatus NRRL 1]
Length = 872
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRR----HPLVDP 111
+FV+ D + D PI+YV+ F TGY DE++G NCRFLQ DP Q + VD
Sbjct: 304 AFVLCDIYQEDHPIVYVSDAFVRLTGYTEDEIVGHNCRFLQ--DPNGQVQAGTARKFVDQ 361
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+R +E+ E Q L+N++K G P +N + + P+R +G Q+
Sbjct: 362 QTAFRLRSTIEDRNEIQATLINYRKGGQPFMNLITMIPVRWTSPDYRFYVGFQV 415
>gi|405974269|gb|EKC38928.1| Acyl-CoA-binding domain-containing protein 4 [Crassostrea gigas]
Length = 478
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 98/209 (46%), Gaps = 25/209 (11%)
Query: 288 LEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP--- 344
LE W V G P+R SA N L +FGG P D + +P
Sbjct: 236 LEEWKWTLLKVAGKA-PTRAYHSATLYRNELWIFGGVYPRPDPQPDGCSNEIHIFSPVSE 294
Query: 345 EWRRVSVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
W + V P R GH+ + LN LV+FGG ND+ +LD+ +++E S
Sbjct: 295 NWYQPIVNGEKPLCRSGHSATMLNDQ-LVIFGGWDAPICYNDLHILDM-----SFVEWSK 348
Query: 404 ----GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS 459
G PPLPRSWH+SC + +++++ GG D + L DT++ +L T W +I +
Sbjct: 349 PKVLGTPPLPRSWHASCALANNRILIHGG-YDGDLALEDTHIFNLGTLS--WMKIRLDPT 405
Query: 460 PPSRLGH---SLSVYGRTK----VLMFGG 481
P R GH SL Y + VL+FGG
Sbjct: 406 PIPRCGHQSLSLPYYHENQEQDEVLIFGG 434
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 36/299 (12%)
Query: 321 FGGEG-VNMQPMDDTFVLNLDAANPEWR----RVSVKSSPPGRWGHTLSSLNGSWLVVFG 375
G EG +N+ P + F ++ P+ S P RWGHT+ + + VV G
Sbjct: 105 IGTEGDINISPSSNKFTKMVEGGKPKVAICKDLTSRAPHPTSRWGHTMCLTDSNTAVVIG 164
Query: 376 GCG-RQGLLND-VFVLDLDAKQPTWIEV-SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDA 432
G G RQ L D V+ LD ++ T EV + P R H++ + + G +
Sbjct: 165 GQGERQQLSKDSVWCLDTVTRKWTCPEVFTESQKPEYRMGHTATYDPKLRCIYVYGGSKN 224
Query: 433 GVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRS 492
D ++LDL K W + + P+R HS ++Y R ++ +FGG+
Sbjct: 225 QRWFHDVHMLDLEEWK--WTLLKVAGKAPTRAYHSATLY-RNELWIFGGVYPR------- 274
Query: 493 GESYTIDLGDEEPQWKQLECNAFTGVGSQ------SAVVPPPRLDHVAVSMPCGRIIIFG 546
D +P E + F+ V + P R H A +M +++IFG
Sbjct: 275 --------PDPQPDGCSNEIHIFSPVSENWYQPIVNGEKPLCRSGHSA-TMLNDQLVIFG 325
Query: 547 GSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGE 605
G A + + L +LD S + W V G PP H++C + R+L+ GG+ G+
Sbjct: 326 GWDAPI-CYNDLHILDMSFVE--WSKPKVLGTPPLPRSWHASCALANNRILIHGGYDGD 381
>gi|448390489|ref|ZP_21566112.1| multi-sensor signal transduction histidine kinase [Haloterrigena
salina JCM 13891]
gi|445666903|gb|ELZ19555.1| multi-sensor signal transduction histidine kinase [Haloterrigena
salina JCM 13891]
Length = 652
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 40 ELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD 99
EL LK + P + DA D P++Y N FE TGY +E+LGRNCRFLQ
Sbjct: 314 ELELKKRAI--DEAPIGITLCDATQSDNPLVYANDQFERITGYSREEILGRNCRFLQGER 371
Query: 100 PRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTH 159
A+ V E+R ++ EL N++ DG+ NR+ +AP+ D+ GTVT+
Sbjct: 372 TEAE---------PVDELRTAIDAERSTTVELRNYRTDGSEFWNRVTVAPVVDERGTVTN 422
Query: 160 IIGIQ 164
+G Q
Sbjct: 423 YVGFQ 427
>gi|432939907|ref|XP_004082622.1| PREDICTED: rab9 effector protein with kelch motifs-like [Oryzias
latipes]
Length = 575
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 13/204 (6%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE---WRRV 349
W+ T +G V P SA L +FGG + D L NPE W +
Sbjct: 348 WKNVTAKGNV-PHLAYHSAVFYKKELFVFGGVQPSRSLGDKCCTNALYIFNPEYELWYQP 406
Query: 350 SVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPL 408
V P R+GH+ + L+ LV+FGG LND+ VLDL + T ++ S PPL
Sbjct: 407 IVDGDKPLARFGHSATLLSQK-LVIFGGQKSAAYLNDLHVLDLGFMEYTAVK-SANMPPL 464
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREI--PTSWSPPSRLGH 466
PR +H++ + ++++VSGGC+ G L D ++ ++ D MW + P S P R GH
Sbjct: 465 PRGFHAALPVSDNRILVSGGCSAVGA-LQDLHIFNM--DTCMWSSVASPLLCSKP-RAGH 520
Query: 467 SLSVYGRTKVLMFGGLAKSGHLRL 490
S+ G + G + G+L L
Sbjct: 521 SMIDLGSRNLTGVKGNTQHGNLNL 544
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 127/302 (42%), Gaps = 49/302 (16%)
Query: 319 VLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSS---PPGRWGHTLS-SLNGSWLVVF 374
VL GGE + D+ + L+ W +S +S P GHT + + + V+
Sbjct: 268 VLVGGETADQSYCADS-LWKLELDGDFWFPMSSAASEAEPTCARGHTATYDPDSKAVFVY 326
Query: 375 GGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGG------ 428
GG N++ +L+ + + G P L ++HS+ + +L V GG
Sbjct: 327 GGLRENQRYNELHILNTLTWKWKNVTAKGNVPHL--AYHSA-VFYKKELFVFGGVQPSRS 383
Query: 429 -----CTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLA 483
CT+A + + Y L ++ I P +R GHS ++ + K+++FGG
Sbjct: 384 LGDKCCTNALYIFNPEYEL-------WYQPIVDGDKPLARFGHSATLLSQ-KLVIFGGQK 435
Query: 484 KSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPP-PRLDHVAVSMPCGRI 542
+ +L + + +DLG E +T V +SA +PP PR H A+ + RI
Sbjct: 436 SAAYL----NDLHVLDLGFME----------YTAV--KSANMPPLPRGFHAALPVSDNRI 479
Query: 543 IIFGG-SIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 601
++ GG S G +F +D W + P K GHS +G + + G
Sbjct: 480 LVSGGCSAVGALQDLHIFNMDTC----MWSSVASPLLCSKPRAGHSMIDLGSRNLTGVKG 535
Query: 602 HT 603
+T
Sbjct: 536 NT 537
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 111/273 (40%), Gaps = 26/273 (9%)
Query: 347 RRVSVKSSPPGRWGHTLSSLNGSWLVVFGG--CGRQGLLNDVFVLDLDAKQPTWIEVSGG 404
+R V + P RW HT+ + V+ GG + + ++ L+LD W +S
Sbjct: 243 QRRQVSARPSKRWSHTMCLSDPDTAVLVGGETADQSYCADSLWKLELDGD--FWFPMSSA 300
Query: 405 AP---PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPP 461
A P H++ SK V G ++ ++L+ T K W+ + + P
Sbjct: 301 ASEAEPTCARGHTATYDPDSKAVFVYGGLRENQRYNELHILNTLTWK--WKNVTAKGNVP 358
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
HS +V+ + ++ +FGG+ S L + + E W Q +
Sbjct: 359 HLAYHS-AVFYKKELFVFGGVQPSRSLGDKCCTNALYIFNPEYELWYQPIVDGDK----- 412
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPS-EEKPSWRILNVPGQPP 580
P R H A ++ +++IFGG + + + L +LD E + + N+P P
Sbjct: 413 ----PLARFGHSA-TLLSQKLVIFGGQKSAAYL-NDLHVLDLGFMEYTAVKSANMPPLPR 466
Query: 581 KFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELH 613
F H+ V R+LV GG + L +LH
Sbjct: 467 GF---HAALPVSDNRILVSGGCSAVG-ALQDLH 495
>gi|188583311|ref|YP_001926756.1| multi-sensor hybrid histidine kinase [Methylobacterium populi
BJ001]
gi|418057848|ref|ZP_12695833.1| multi-sensor hybrid histidine kinase [Methylobacterium extorquens
DSM 13060]
gi|179346809|gb|ACB82221.1| multi-sensor hybrid histidine kinase [Methylobacterium populi
BJ001]
gi|373568664|gb|EHP94608.1| multi-sensor hybrid histidine kinase [Methylobacterium extorquens
DSM 13060]
Length = 888
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T V+ + PD PI++VN F TGY +E+LGRNCRFLQ P DP
Sbjct: 45 TRMPMVITNPRRPDNPIVFVNDAFCRLTGYAREEILGRNCRFLQ---------GPETDPE 95
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V IR + + ++ N KKDGTP NRL LAP+ D G + + Q+
Sbjct: 96 TVRLIREAIVAPRSIEIDIRNHKKDGTPFWNRLLLAPVNDAGGDLAYFFASQL 148
>gi|440798876|gb|ELR19937.1| BTB/POZ domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 893
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 136/304 (44%), Gaps = 41/304 (13%)
Query: 304 PSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPG-RWGHT 362
PSR +A L FGG+ N + ++D + + A EWR+V+ +PP R+ H+
Sbjct: 128 PSRNKHTAVHYNGSLYFFGGDDGNSR-LNDLYQFII--AKKEWRKVATSGNPPKPRYYHS 184
Query: 363 LSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSK 422
+ + G + VFGG ND F ++ T +E +G P RS H++ + G+
Sbjct: 185 -AVVEGPCMYVFGGYTDHN-HNDTFQYHFGTREWTQLECAGEVPS-QRSGHNAVMHNGAM 241
Query: 423 LVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGL 482
V G D L+D + LD++ K W + ++ P+ ++ +V +L+F G
Sbjct: 242 YVFGG--YDGSKRLNDLFKLDIS--KREWEAVESTGKAPTSRCNASAVVIEGSMLVFAG- 296
Query: 483 AKSGHLRLRSGESYTIDLGD---EEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPC 539
SG + DL D W Q+EC S P RL H +V C
Sbjct: 297 --------HSGVATNADLYDYNFASRTWSQIEC---------SGDAPSKRLGHTSV---C 336
Query: 540 GR--IIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVL 597
+ + +FGG+ A + + L+ L+ +K W ++ G P F+ + T VV T +
Sbjct: 337 NQDHMYMFGGTAAN-NFCNDLYRLNI--QKKEWVLIRTTG-PTPFSRCYHTAVVVDTVMY 392
Query: 598 VLGG 601
+ GG
Sbjct: 393 IFGG 396
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 90/196 (45%), Gaps = 13/196 (6%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
WRK G R SA G + +FGG +DTF + EW ++
Sbjct: 167 WRKVATSGNPPKPRYYHSAVVEGPCMYVFGG--YTDHNHNDTFQYHF--GTREWTQLECA 222
Query: 353 SSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
P R GH NG+ + VFGG LND+F LD+ ++ +E +G A P R
Sbjct: 223 GEVPSQRSGHNAVMHNGA-MYVFGGYDGSKRLNDLFKLDISKREWEAVESTGKA-PTSRC 280
Query: 412 WHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RLGHSLSV 470
S+ +IEGS LV +G +GV ++ L D W +I S PS RLGH+ SV
Sbjct: 281 NASAVVIEGSMLVFAG---HSGV-ATNADLYDYNFASRTWSQIECSGDAPSKRLGHT-SV 335
Query: 471 YGRTKVLMFGGLAKSG 486
+ + MFGG A +
Sbjct: 336 CNQDHMYMFGGTAANN 351
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 32/277 (11%)
Query: 347 RRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV-SGGA 405
R +S PP R HT NGS L FGG LND++ + K+ W +V + G
Sbjct: 119 RAYEDRSPPPSRNKHTAVHYNGS-LYFFGGDDGNSRLNDLYQFIIAKKE--WRKVATSGN 175
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS-RL 464
PP PR +HS+ ++EG + V GG TD +DT+ T + W ++ + PS R
Sbjct: 176 PPKPRYYHSA-VVEGPCMYVFGGYTDHN--HNDTFQYHFGTRE--WTQLECAGEVPSQRS 230
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
GH+ +V + +FGG S L + + +D+ E W+ +E +
Sbjct: 231 GHN-AVMHNGAMYVFGGYDGSKRL----NDLFKLDISKRE--WEAVES---------TGK 274
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 584
P R + AV + G +++F G +G+ + + L+ D + +W + G P
Sbjct: 275 APTSRCNASAVVIE-GSMLVFAGH-SGVATNADLY--DYNFASRTWSQIECSGDAPSKRL 330
Query: 585 GHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
GH T V + + GG T N+L+ L + K+
Sbjct: 331 GH-TSVCNQDHMYMFGG-TAANNFCNDLYRLNIQKKE 365
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 293 WRKFTVRGAVEPSRCNFSACA-AGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSV 351
W G SRCN SA G+ LV G GV D + N A+ W ++
Sbjct: 266 WEAVESTGKAPTSRCNASAVVIEGSMLVFAGHSGVATNA--DLYDYNF--ASRTWSQIEC 321
Query: 352 K-SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAP-PLP 409
+P R GHT S N + +FGG ND++ L++ K+ W+ + P P
Sbjct: 322 SGDAPSKRLGHT-SVCNQDHMYMFGGTAANNFCNDLYRLNIQKKE--WVLIRTTGPTPFS 378
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKP 449
R +H++ +++ + G DA L D Y P
Sbjct: 379 RCYHTAVVVDTVMYIFGGAPPDAHPL--DLYSFTFAAVDP 416
>gi|319411491|emb|CBQ73535.1| related to white collar 1 protein [Sporisorium reilianum SRZ2]
Length = 1076
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 7/115 (6%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR----DPRAQRRHPLVDP 111
SF ++DA P P+IY ++ F TGY E+LG+NCRFLQ + A+R+H D
Sbjct: 402 SFAISDARHPKQPLIYASETFCHLTGYTLHEILGKNCRFLQTPGVPLEAGAERQH--TDN 459
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQI 165
V ++R L E Q L+N++KDG+P +N + + P+ D V ++G Q+
Sbjct: 460 RAVEHLKRHLTGFRECQASLINYRKDGSPFINLVTVVPVSWSDPSQVDFLVGFQV 514
>gi|291224202|ref|XP_002732095.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 550
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 22/224 (9%)
Query: 273 TKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMD 332
+K L W L +E W G P+R S G+ L +FGG N P
Sbjct: 314 SKNLRWYNDIHVLD-VETWTWSLVKTNGKA-PTRAYHSTTLFGSELFVFGGVYPNPDPQP 371
Query: 333 DTFVLNLDAANPE----WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFV 388
D + NP + + + P R GH+ + +N L++FGG ND+ +
Sbjct: 372 DGCSNQVHVYNPATESWYEPIVMGEKPLPRSGHSATLVNDK-LIIFGGWDAPMCYNDLHI 430
Query: 389 LDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDK 448
LDL T E+ G PP PRSWH++ + ++L++ GG D L D+++ L D
Sbjct: 431 LDLSMMDFTKPEIKG-TPPSPRSWHAAVGLSNNRLLIHGGF-DGDHALGDSFIFHL--DT 486
Query: 449 PMWREIPTSWSPPSRLGHSLS-----------VYGRTKVLMFGG 481
+W ++ S +R GHS+ + R K+L+FGG
Sbjct: 487 CIWTQLKHSLPISARAGHSMICLDNPDQNKDLTFKRQKILVFGG 530
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 126/285 (44%), Gaps = 40/285 (14%)
Query: 336 VLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCG-RQGLLNDVFVLDLDAK 394
VL L + + + + +P RWGH+L ++N S ++ GG G RQ L D L L+ +
Sbjct: 216 VLGLVFTDHKIYAIVIPDAPSERWGHSLCTINSSEAILIGGQGTRQQLSKDSIWL-LNTE 274
Query: 395 QPTW----IEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPM 450
Q TW I S A P R HS+ K V G + +D ++LD+ T
Sbjct: 275 QKTWRVPTILNSDNAKPQYRMGHSTTYDPIVKCVYVFGGSKNLRWYNDIHVLDVET--WT 332
Query: 451 WREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQL 510
W + T+ P+R HS +++G +++ +FGG+ + D +P
Sbjct: 333 WSLVKTNGKAPTRAYHSTTLFG-SELFVFGGVYPN---------------PDPQPDGCSN 376
Query: 511 ECNAF---TGVGSQSAVV---PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPS 564
+ + + T + V+ P PR H A ++ ++IIFGG A + + L +LD S
Sbjct: 377 QVHVYNPATESWYEPIVMGEKPLPRSGHSA-TLVNDKLIIFGGWDAPM-CYNDLHILDLS 434
Query: 565 E---EKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEE 606
KP + G PP H+ + R+L+ GG G+
Sbjct: 435 MMDFTKPE-----IKGTPPSPRSWHAAVGLSNNRLLIHGGFDGDH 474
>gi|328871746|gb|EGG20116.1| hypothetical protein DFA_07236 [Dictyostelium fasciculatum]
Length = 466
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 131/307 (42%), Gaps = 22/307 (7%)
Query: 183 ENCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRDVASIGSVCRR 242
E+ N Q Y +S L Q+ + ++DE+ + ILS +T +D+ S+ C+
Sbjct: 44 EDDNNNLYQDDFYNFNNNSSLFQYFPL-----MNDEIKMY-ILSFMTLKDLLSLSQSCKE 97
Query: 243 IRQLTKNEHVRKMVCQNAWGREVTGAL----ELMTKKLGWGRLARELTTLEAVCWRKFTV 298
+R + ++ + + N+ G +T ++ L KK + + LT +V W
Sbjct: 98 MRAMVEDRLLWFQLL-NSHGFSITDSIRDNSSLDLKK--YFSDLKNLTAKNSVQWSPLEF 154
Query: 299 RGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGR 358
G R ++ N +V+ GG+ N + D + D E+ R + P R
Sbjct: 155 NGVFPTKRYKHTSSVYKNYVVIIGGQRSNSKRYGDIYYY--DTKTNEFSRPKIVGDQPPR 212
Query: 359 WGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCII 418
+ S + G + +FGG G ++ +L K+ I + G P PRS HSS +I
Sbjct: 213 FSRHTSQVIGDKIYIFGGFNGNGTYFNLSTYNLKLKKWKNILETKGMAPDPRSNHSSAVI 272
Query: 419 EGSKLVVSGGCTDAG---VLLSDTYLLDLTTDKPMWREIPTSWSPP-SRLGHSLSVYGRT 474
+ SG T +L D Y L+ T W +I + P R GH++ V
Sbjct: 273 GSKYYIFSGNNTTNDGEYKILEDFYYLE--TKTLTWHKINATGDIPCGRGGHTMEVID-G 329
Query: 475 KVLMFGG 481
K+ +FGG
Sbjct: 330 KIYLFGG 336
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 298 VRGAVEPSRCNFSACAAGNRLVLFGGEGVN----MQPMDDTFVLNLDAANPEWRRVSVKS 353
+G R N S+ G++ +F G + ++D + L + W +++
Sbjct: 256 TKGMAPDPRSNHSSAVIGSKYYIFSGNNTTNDGEYKILEDFYYL--ETKTLTWHKINATG 313
Query: 354 SPP-GRWGHTLSSLNGSWLVVFGG------CGRQGLLNDVFVLDLDAKQPTWIEVSGGAP 406
P GR GHT+ ++G + +FGG ND+ + D + W + S P
Sbjct: 314 DIPCGRGGHTMEVIDGK-IYLFGGGIWSPVSDWTQRFNDIHIYDPETN--CWSKPSIYGP 370
Query: 407 PLPRSWHSSCIIEGSKLVV-SGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS--WSPPSR 463
S ++ + G LV+ GGC + ++TY LD T W +P S ++P R
Sbjct: 371 APNTSTFTTSFVYGRFLVLFGGGCQSTNSVCNNTYALD--TKSMNWINMPLSDTYTPRPR 428
Query: 464 LGHSLSVYGRTKVLMFGGLA 483
+ S+ G + +FGG +
Sbjct: 429 DMATASLVGN-NLFVFGGFS 447
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 14/183 (7%)
Query: 273 TKKLGWGRLARELTTLEA--VCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQP 330
T G ++ + LE + W K G + R + ++ LFGG G+
Sbjct: 284 TTNDGEYKILEDFYYLETKTLTWHKINATGDIPCGRGGHTMEVIDGKIYLFGG-GIWSPV 342
Query: 331 MDDTFVLN-LDAANPE---WRRVSVKSSPPGRWGHTLSSLNGSWLVVF-GGC-GRQGLLN 384
D T N + +PE W + S+ P T S + G +LV+F GGC + N
Sbjct: 343 SDWTQRFNDIHIYDPETNCWSKPSIYGPAPNTSTFTTSFVYGRFLVLFGGGCQSTNSVCN 402
Query: 385 DVFVLDLDAKQPTWIEV--SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLL 442
+ + LD K WI + S P PR ++ ++ G+ L V GG + V D
Sbjct: 403 NTYA--LDTKSMNWINMPLSDTYTPRPRDMATASLV-GNNLFVFGGFSGGPVNYFDQITF 459
Query: 443 DLT 445
+ T
Sbjct: 460 NFT 462
>gi|359779999|ref|ZP_09283226.1| histidine kinase [Pseudomonas psychrotolerans L19]
gi|359372615|gb|EHK73179.1| histidine kinase [Pseudomonas psychrotolerans L19]
Length = 538
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 70/140 (50%), Gaps = 21/140 (15%)
Query: 29 EGGGGGGGDDTELSLKPGLLFYPT---TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRAD 85
E G G G DD +F+ T +V D PD PII+ N+ F TGY D
Sbjct: 19 ELGKGLGHDD---------IFFAAVKKTRMPMIVTDPHQPDNPIIFANESFLRTTGYALD 69
Query: 86 EVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRL 145
EVLGRNCRFLQ D R + ++EIR + E + ELLN++KDG+ N L
Sbjct: 70 EVLGRNCRFLQGPDTRQEH---------IAEIRNAIREQRDCDIELLNYRKDGSTFWNAL 120
Query: 146 RLAPIRDDDGTVTHIIGIQI 165
++P+ D G + + Q+
Sbjct: 121 FISPVLDPAGQLRYFFASQL 140
>gi|448569959|ref|ZP_21639042.1| HTR-like protein [Haloferax lucentense DSM 14919]
gi|445723763|gb|ELZ75400.1| HTR-like protein [Haloferax lucentense DSM 14919]
Length = 393
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
+ VV D PD PI+Y+N FE TGY A+ V GR+ RFL P DP V
Sbjct: 276 VAIVVIDPSRPDNPIVYLNAAFETLTGYDAESVTGRSYRFLC---------GPETDPETV 326
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
+E+RR ++ G E+ N+ G P V+RL + P+RDD+G +
Sbjct: 327 AEVRRAVDAGESISTEIRNYDAHGDPFVSRLDIRPVRDDNGAL 369
>gi|297622520|ref|YP_003703954.1| PAS/PAC sensor signal transduction histidine kinase [Truepera
radiovictrix DSM 17093]
gi|297163700|gb|ADI13411.1| PAS/PAC sensor signal transduction histidine kinase [Truepera
radiovictrix DSM 17093]
Length = 530
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 79/164 (48%), Gaps = 23/164 (14%)
Query: 65 PDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEG 124
P I YVN+ FE +GYR DEVLG+ R LQ P DP V++ +R+ L G
Sbjct: 207 PGPQIRYVNRAFERLSGYRRDEVLGKTPRVLQ---------GPKTDPQVLAHLRQRLLGG 257
Query: 125 IEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDLNHVSYPVFKEN 184
F+GE +N++KDG+ VN +APIR G +TH + Q + L + E
Sbjct: 258 EVFRGETVNYRKDGSAFVNEWHIAPIRSGAGEITHWVATQRDVTERRQLER----LVAEA 313
Query: 185 CNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRL 228
++ + A+ H L QH + G LA N+ +RL
Sbjct: 314 ATREQQRVARDL---HDTLGQH--LAGTA-----FLARNLATRL 347
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
T + +V D D PIIYVN+ FE TGY +E LGRNCRFLQ D D
Sbjct: 68 ATNNTVIVTDPNQEDNPIIYVNRGFEQLTGYTREEALGRNCRFLQGDD---------TDQ 118
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ +R + EG + + L N++KDG+ N L + + DG + + G+Q
Sbjct: 119 EALPALREAVREGRDIRVVLRNYRKDGSLFWNELYVTAVW-RDGVLAYFFGVQ 170
>gi|378731847|gb|EHY58306.1| GATA transcription factor LreA [Exophiala dermatitidis NIH/UT8656]
Length = 1045
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPLVDP 111
+FVV D D PI+Y +++FE TGY E+LGRNCRFLQ D P +R++ VD
Sbjct: 372 AFVVCDIEKFDLPIVYCSEMFERLTGYTKHEILGRNCRFLQSPDGKVRPGMKRKY--VDD 429
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++ + + E Q L+N++K G P +N L + PI+ D +G Q+
Sbjct: 430 SSVLYLKNQISKRAEAQLSLINYRKGGQPFMNLLTMIPIQFDSDDYKFYVGFQV 483
>gi|209524032|ref|ZP_03272583.1| multi-sensor signal transduction histidine kinase [Arthrospira
maxima CS-328]
gi|209495407|gb|EDZ95711.1| multi-sensor signal transduction histidine kinase [Arthrospira
maxima CS-328]
Length = 1184
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+P V+++ D PIIY N FE TGY +EV+G+NCRFLQ P
Sbjct: 352 ASPNGIVISENTKNDLPIIYCNAAFEKLTGYTKEEVIGQNCRFLQ---------GPETHE 402
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++ IR+ ++ + L N++K+G+ N L ++P+RD G +TH IGIQ
Sbjct: 403 DAIAMIRQSIKRKQGCKVTLKNYRKNGSCFWNELAISPVRDHRGKLTHFIGIQ 455
>gi|217969788|ref|YP_002355022.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Thauera sp. MZ1T]
gi|217507115|gb|ACK54126.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Thauera sp. MZ1T]
Length = 905
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 9/112 (8%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+ ++ DA P P+I+VNK FE TGY A E LGRN FL DP QR
Sbjct: 362 ASANGIMITDARQPGNPLIHVNKAFERITGYSAAEALGRNPGFLVGADP-LQRG------ 414
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
++E+R ++ E + L + +KDG+P N L LAP+RD GTVTH +G+
Sbjct: 415 --LAEVRAAVKAQREAEVVLRSHRKDGSPFWNELSLAPVRDSAGTVTHFVGV 464
>gi|423065965|ref|ZP_17054755.1| putative two-component sensor histidine kinase [Arthrospira
platensis C1]
gi|406712464|gb|EKD07649.1| putative two-component sensor histidine kinase [Arthrospira
platensis C1]
Length = 1240
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+P V+++ D PIIY N FE TGY +EV+G+NCRFLQ P
Sbjct: 352 ASPNGIVISENTKNDLPIIYCNAAFEKLTGYTKEEVIGQNCRFLQ---------GPETHE 402
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++ IR+ ++ + L N++K+G+ N L ++P+RD G +TH IGIQ
Sbjct: 403 DAIAMIRQSIKRKQGCKVTLKNYRKNGSCFWNELAISPVRDHRGKLTHFIGIQ 455
>gi|398389641|ref|XP_003848281.1| blue-light-activated transcription factor [Zymoseptoria tritici
IPO323]
gi|339468156|gb|EGP83257.1| blue-light-activated transcription factor [Zymoseptoria tritici
IPO323]
Length = 1068
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPLVDP 111
+FVV DA DFPI+Y + FE TGY +LGRNCRFLQ D P +R++ VD
Sbjct: 403 AFVVCDAEKDDFPIVYCSDNFERLTGYTKHMILGRNCRFLQSPDGNVAPGVRRKY--VDD 460
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++ + E Q L+N+++ G P +N L + PI D V +G Q+
Sbjct: 461 DSVLYLKNMITARQESQISLINYRRGGQPFMNLLTMIPITWDSDQVKFFVGFQV 514
>gi|376004225|ref|ZP_09781972.1| putative two-component sensor histidine kinase [Arthrospira sp. PCC
8005]
gi|375327431|emb|CCE17725.1| putative two-component sensor histidine kinase [Arthrospira sp. PCC
8005]
Length = 1240
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+P V+++ D PIIY N FE TGY +EV+G+NCRFLQ P
Sbjct: 352 ASPNGIVISENTKNDLPIIYCNAAFEKLTGYTKEEVIGQNCRFLQ---------GPETHE 402
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++ IR+ ++ + L N++K+G+ N L ++P+RD G +TH IGIQ
Sbjct: 403 DAIAMIRQSIKRKQGCKVTLKNYRKNGSCFWNELAISPVRDHRGKLTHFIGIQ 455
>gi|428303722|ref|YP_007140547.1| multi-sensor signal transduction histidine kinase [Crinalium
epipsammum PCC 9333]
gi|428245257|gb|AFZ11037.1| multi-sensor signal transduction histidine kinase [Crinalium
epipsammum PCC 9333]
Length = 973
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
++ D P+ PIIY+N F TGY A ++LG NCR LQ ++ DP +
Sbjct: 78 IIITDPHQPNNPIIYINPAFTKITGYTAQDILGENCRCLQGKE---------TDPQAIEL 128
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR + + Q LLN++KDG P N L+++P+ D + + IGIQ
Sbjct: 129 IREAISKKEPVQVTLLNYRKDGQPFWNELKISPVFSDQENLLYFIGIQ 176
>gi|448599643|ref|ZP_21655446.1| HTR-like protein [Haloferax alexandrinus JCM 10717]
gi|445736316|gb|ELZ87860.1| HTR-like protein [Haloferax alexandrinus JCM 10717]
Length = 393
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
+ VV D PD PI+Y+N FE TGY A+ V GR+ RFL P DP V
Sbjct: 276 VAIVVIDPSRPDNPIVYLNAAFETLTGYDAESVTGRSYRFLC---------GPETDPETV 326
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
+E+RR ++ G E+ N+ G P V+RL + P+RDD+G +
Sbjct: 327 AEVRRAVDAGESISTEIRNYDAHGDPFVSRLDIRPVRDDNGAL 369
>gi|347835005|emb|CCD49577.1| hypothetical protein [Botryotinia fuckeliana]
Length = 873
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
F + D PD PI++ ++ F T Y VLGRNCRFLQ P +P V
Sbjct: 476 FCLTDPSRPDNPIVFASEEFHRTTQYGMSYVLGRNCRFLQ---------GPKTNPFSVRR 526
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR +E G E LN+++DG+P +N L AP+ D GT+ + IG Q+
Sbjct: 527 IREKIEAGQEHCETFLNYRRDGSPFMNLLMCAPLCDSRGTIRYFIGAQV 575
>gi|448666702|ref|ZP_21685347.1| HTR-like protein [Haloarcula amylolytica JCM 13557]
gi|445771833|gb|EMA22889.1| HTR-like protein [Haloarcula amylolytica JCM 13557]
Length = 748
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P + D PI Y N+ F TGY EVLGRNCRFLQ + ++ PV
Sbjct: 265 PVGITITSPEQEDNPITYANRRFLELTGYTESEVLGRNCRFLQGEETESE-------PV- 316
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R ++E EL N++KDGT N++ +AP+RDDDGTV + +G Q
Sbjct: 317 -DTMRAAVDEDEPVSVELRNYRKDGTMFWNQVTIAPVRDDDGTVVNHVGFQ 366
>gi|319411634|emb|CBQ73678.1| related to Tip elongation aberrant protein 1 [Sporisorium reilianum
SRZ2]
Length = 788
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 15/197 (7%)
Query: 289 EAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLF-GGEGVNMQPMDDTFVLNLDAANPEWR 347
E +CW K V G + P+R SA RL +F GG+G + +D ++ D + W
Sbjct: 518 ETMCWSKPKVTGDIPPARRAHSATMVNKRLFVFAGGDGPHY--FNDLYI--FDTVSLRWS 573
Query: 348 RVSV-KSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDL-DAKQPTWIEVS-GG 404
+ V ++P R HT + G L+VFGG G LNDV LD+ D + W ++ G
Sbjct: 574 KPEVGGTAPSPRRAHTCNYYEGQ-LIVFGGGNGVGALNDVHTLDVNDLSRLEWRKLDCSG 632
Query: 405 APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
P+ R +H+S +++G KL+V GG +D + +D ++L L D W ++ T +RL
Sbjct: 633 KVPIGRGYHTSNLVDG-KLIVIGG-SDGHMSFNDIHILRL--DTRTWYQVKTD-EIHNRL 687
Query: 465 GHSLSVYGRTKVLMFGG 481
GH+ + G + + +FGG
Sbjct: 688 GHTATQVG-SYLFIFGG 703
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 32/280 (11%)
Query: 346 WRRVSVKSSPPGRW--GHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
W + V S P R HT ++L L +FGGC +G D++ D + + +V+G
Sbjct: 471 WSKAPVHGSVPRRSFRAHT-ANLCDEVLWLFGGCDNRGCFRDLWCFDTETMCWSKPKVTG 529
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS- 462
PP R+ HS+ ++ V +GG D +D Y+ D + + W + + PS
Sbjct: 530 DIPPARRA-HSATMVNKRLFVFAGG--DGPHYFNDLYIFDTVSLR--WSKPEVGGTAPSP 584
Query: 463 RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD-EEPQWKQLECNAFTGVGSQ 521
R H+ + Y ++++FGG G L + +T+D+ D +W++L+C
Sbjct: 585 RRAHTCNYY-EGQLIVFGGGNGVGAL----NDVHTLDVNDLSRLEWRKLDC--------- 630
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
S VP R H + ++ G++I+ GGS G S + + +L + +W V
Sbjct: 631 SGKVPIGRGYHTS-NLVDGKLIVIGGS-DGHMSFNDIHIL--RLDTRTW--YQVKTDEIH 684
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
GH+ V G+ + + GGH + + +EL L L + Q
Sbjct: 685 NRLGHTATQV-GSYLFIFGGHDSKTYT-SELLTLNLVNLQ 722
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ L + WRK G V R ++ +L++ GG +M +D +L LD
Sbjct: 616 DVNDLSRLEWRKLDCSGKVPIGRGYHTSNLVDGKLIVIGGSDGHMS-FNDIHILRLDTRT 674
Query: 344 PEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
W +V R GHT + + GS+L +FGG + +++ L+L Q +V G
Sbjct: 675 --WYQVKTDEI-HNRLGHTATQV-GSYLFIFGGHDSKTYTSELLTLNLVNLQWEPRKVCG 730
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDL 444
PL R +H + + + S+L V GG D + D + LDL
Sbjct: 731 QK-PLGRGYHQAWLRD-SRLFVHGGF-DGKDIFDDLHFLDL 768
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 81/185 (43%), Gaps = 21/185 (11%)
Query: 293 WRKFTVRG-AVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNL-DAANPEWRRVS 350
W K V G A P R + G +V GG GV ++D L++ D + EWR++
Sbjct: 572 WSKPEVGGTAPSPRRAHTCNYYEGQLIVFGGGNGVGA--LNDVHTLDVNDLSRLEWRKLD 629
Query: 351 VKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLP 409
P GR HT + ++G L+V GG ND+ +L LD + TW +V
Sbjct: 630 CSGKVPIGRGYHTSNLVDGK-LIVIGGSDGHMSFNDIHILRLDTR--TWYQVKTDE-IHN 685
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTT----------DKPMWREIPTSWS 459
R H++ + GS L + GG D+ S+ L+L KP+ R +W
Sbjct: 686 RLGHTATQV-GSYLFIFGGH-DSKTYTSELLTLNLVNLQWEPRKVCGQKPLGRGYHQAWL 743
Query: 460 PPSRL 464
SRL
Sbjct: 744 RDSRL 748
>gi|302825520|ref|XP_002994371.1| hypothetical protein SELMODRAFT_432297 [Selaginella moellendorffii]
gi|300137726|gb|EFJ04563.1| hypothetical protein SELMODRAFT_432297 [Selaginella moellendorffii]
Length = 353
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 24/219 (10%)
Query: 292 CWRKFTVRGAVEPSRCNFSACAAGNRLVLFGG-EGVNMQPMDDTFVLNLDAANPEWRRVS 350
W K ++G R + S+ A G++L +FGG G ++ ++D FVL D A W +
Sbjct: 125 TWSKPVMKGTHPSPRDSHSSTAVGSKLYVFGGTNGTSL--LNDLFVL--DTATTTWGKPD 180
Query: 351 VKSS-PPGRWGHTLSSLNGSWLVVFGGCGR------QGLLNDVFVLDLDAKQPTWIEVS- 402
V P R GH+ +SL G L VFGGCG+ + ND+ VL+ + W ++S
Sbjct: 181 VFGDVPASREGHS-ASLIGDNLFVFGGCGKSSDPSEEEYYNDLHVLNTNTF--VWKKIST 237
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS 462
G P+P+ H +C + VV GG L+D Y+LD T+ WRE+ T+ +
Sbjct: 238 TGVSPIPQDSH-TCSFYKNCFVVMGGEDGDNAYLNDVYILD--TETMAWREVKTTGAELM 294
Query: 463 -RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDL 500
R GH+ +G+ +++FGG + L + +T+DL
Sbjct: 295 LRAGHTTISHGK-YLVVFGGFSYDHKL---FNDVHTLDL 329
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 98/230 (42%), Gaps = 34/230 (14%)
Query: 397 TWIE-VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP 455
TW + V G P PR HSS + GSKL V GG T+ LL+D ++LD T
Sbjct: 125 TWSKPVMKGTHPSPRDSHSSTAV-GSKLYVFGG-TNGTSLLNDLFVLDTAT--------- 173
Query: 456 TSWS--------PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW 507
T+W P SR GHS S+ G + +FGG KS S E Y DL
Sbjct: 174 TTWGKPDVFGDVPASREGHSASLIG-DNLFVFGGCGKSSD---PSEEEYYNDL------- 222
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEK 567
L N F + V P D S ++ GG + +++LD E
Sbjct: 223 HVLNTNTFVWKKISTTGVSPIPQDSHTCSFYKNCFVVMGGEDGDNAYLNDVYILD--TET 280
Query: 568 PSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCL 617
+WR + G GH+T + G ++V GG + + + N++H L L
Sbjct: 281 MAWREVKTTGAELMLRAGHTT-ISHGKYLVVFGGFSYDHKLFNDVHTLDL 329
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 346 WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTW--IEVSG 403
W + +K + P S+ GS L VFGG LLND+FV LD TW +V G
Sbjct: 126 WSKPVMKGTHPSPRDSHSSTAVGSKLYVFGGTNGTSLLNDLFV--LDTATTTWGKPDVFG 183
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLD---LTTDKPMWREIPTS-WS 459
P R HS+ +I G L V GGC + + Y D L T+ +W++I T+ S
Sbjct: 184 DVPA-SREGHSASLI-GDNLFVFGGCGKSSDPSEEEYYNDLHVLNTNTFVWKKISTTGVS 241
Query: 460 PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVG 519
P + H+ S Y V+M G + +L + Y +D E W++++ G
Sbjct: 242 PIPQDSHTCSFYKNCFVVMGGEDGDNAYL----NDVYILD--TETMAWREVKT-----TG 290
Query: 520 SQSAVVPPPRLDHVAVSMPCGRIIIFGG 547
++ + R H +S +++FGG
Sbjct: 291 AELML----RAGHTTISH-GKYLVVFGG 313
>gi|50299497|gb|AAT73612.1| putative blue light photoreceptor [Cryptococcus neoformans var.
neoformans]
Length = 1141
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
SFVV D D PI+Y + F TGY ++LGRNCRFLQ D + + D
Sbjct: 567 SFVVVDIRRYDSPIVYASPNFTRLTGYELPQLLGRNCRFLQSPDGEVTKGSKREYTDNEA 626
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++R LE G E Q L+N++++G P +N + + PI D + + +G QI
Sbjct: 627 VYLLKRSLEAGKECQTSLINYRRNGEPFINLVTVVPIPWDGPDIVYHVGFQI 678
>gi|255945463|ref|XP_002563499.1| Pc20g10050 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588234|emb|CAP86334.1| Pc20g10050 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 667
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
F + D PD PII+ ++ F T Y D VLGRNCRFLQ P +P V
Sbjct: 348 FCLTDPSRPDNPIIFASEEFHRNTQYGMDYVLGRNCRFLQ---------GPKTNPNSVRR 398
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR L+ G LLN+++DG+P +N L ++P+ D+ G + + IG QI
Sbjct: 399 IREALKAGRYHSELLLNYRRDGSPFMNLLEISPLCDNRGKLRYFIGAQI 447
>gi|424875449|ref|ZP_18299111.1| PAS domain S-box [Rhizobium leguminosarum bv. viciae WSM1455]
gi|393171150|gb|EJC71197.1| PAS domain S-box [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 375
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ T +V D D PII+ N FE TGY DE++GRNCR LQ P RR
Sbjct: 32 FKATRMPMIVTDPAQHDNPIIFCNAAFEKMTGYSNDELIGRNCRLLQ--GPETDRR---- 85
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI-FSE 168
V IR + G + ++LN++KDG+ N L ++P+RDD+G + + Q+ F+
Sbjct: 86 ---TVGHIRDSVARGQDISVDILNYRKDGSTFWNALFISPVRDDEGRIIYFFASQLDFTT 142
Query: 169 AK 170
K
Sbjct: 143 VK 144
>gi|422650011|ref|ZP_16712818.1| sensory box/GGDEF domain-containing protein [Pseudomonas syringae
pv. actinidiae str. M302091]
gi|330963101|gb|EGH63361.1| sensory box/GGDEF domain-containing protein [Pseudomonas syringae
pv. actinidiae str. M302091]
Length = 425
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 9/96 (9%)
Query: 69 IIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQ 128
I+YVN F TGY ADE++G + R LQ D DP V+ +R+CL E + F+
Sbjct: 36 IVYVNPAFCTMTGYTADELIGVSPRILQGAD---------TDPQVIERLRQCLSERLFFE 86
Query: 129 GELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G +N++ DG+P V +++P+RDD GTV + + +Q
Sbjct: 87 GSTVNYRADGSPYVVEWKISPVRDDTGTVCNFVSVQ 122
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 62 AFDP------DFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
AFDP + I++ N+ F++ TGY A E++G+N R L R D + +
Sbjct: 145 AFDPIIITDRNSTIVFANEAFQLITGYSAPEIIGQNPRML---------RSDEHDALFYA 195
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
+ L G F+ +N +KDG+ ++P+R+ +G +TH + I
Sbjct: 196 QFNESLASGEPFRTTFINKRKDGSLFYAEHSISPLRNVEGAMTHYVSI 243
>gi|321256992|ref|XP_003193431.1| white collar 1 protein (WC1) [Cryptococcus gattii WM276]
gi|317459901|gb|ADV21644.1| White collar 1 protein (WC1), putative [Cryptococcus gattii WM276]
Length = 1096
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
SFVV D D PI+Y + F TGY ++LGRNCRFLQ D + + + D
Sbjct: 523 SFVVVDIRRYDSPIVYASPTFTRLTGYELPQLLGRNCRFLQSPDGQVVKGSKREYTDNEA 582
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++R +E G E Q L+N++++G P +N + + PI D + + +G QI
Sbjct: 583 VYLLKRSIEAGKECQTSLINYRRNGEPFINLVTVVPIPWDGPEIVYHVGFQI 634
>gi|399909284|ref|ZP_10777836.1| putative PAS/PAC sensor protein [Halomonas sp. KM-1]
Length = 144
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
VVA+ + +IYVNK FE TGY ADE+L ++CRFLQ D R P +D I
Sbjct: 24 VVAEQEGDENILIYVNKGFERLTGYSADEILYQDCRFLQNDD----RDQPALD-----NI 74
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R+ L EG + L N++KDGT N L + P+ D D +T+ IG+Q
Sbjct: 75 RKALAEGRPCREVLRNYRKDGTLFWNELSITPVYDADDNLTYYIGVQ 121
>gi|448311400|ref|ZP_21501163.1| bacterio-opsin activator [Natronolimnobius innermongolicus JCM
12255]
gi|445605017|gb|ELY58953.1| bacterio-opsin activator [Natronolimnobius innermongolicus JCM
12255]
Length = 645
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++D D P++Y+N ++ TGY DEV+GRNCRFLQ D
Sbjct: 149 PVGITISDPALEDNPLVYINDAYQEITGYGYDEVVGRNCRFLQGEDSSEA---------A 199
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
++E+ ++E EL N++KDGT N + +AP+RD+ GTVTH +G Q
Sbjct: 200 IAEMAAAIDEDRPVTVELKNYRKDGTEFWNEVTIAPVRDETGTVTHYVGFQ 250
>gi|422607389|ref|ZP_16679389.1| histidine kinase, partial [Pseudomonas syringae pv. mori str.
301020]
gi|330891031|gb|EGH23692.1| histidine kinase [Pseudomonas syringae pv. mori str. 301020]
Length = 254
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D D PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 30 TTRMPMIVTDPNRADNPIIFSNRAFLEMTGYSSEEIIGTNCRFLQ---------GPETDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV IR ++E ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AVVQSIREAIDERVDISTEILNYRKDGSTFWNALFISPVYNDAGDLIYFFASQL 134
>gi|328863072|gb|EGG12172.1| putative white collar 1 photoreceptor [Melampsora larici-populina
98AG31]
Length = 951
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPR--------AQR 104
T T+ V+ DA D PI++ + F TGY E++G+NCRFLQ PR ++R
Sbjct: 275 TSTALVIVDARKKDLPIVFASASFSTLTGYENYEIVGQNCRFLQ--SPRSAGLAKKGSKR 332
Query: 105 RHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+H D V ++ + G E Q ++N++K+G P VN + + PI+ VT+ IG Q
Sbjct: 333 KH--SDSTAVYHMKAHIMAGKESQSSIINYRKNGQPFVNLVTVIPIQWGSDEVTYYIGFQ 390
Query: 165 I 165
+
Sbjct: 391 V 391
>gi|426194948|gb|EKV44878.1| WC-1 blue light photoreceptor [Agaricus bisporus var. bisporus H97]
Length = 880
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
SFVV D D PI+Y + F TGY ++VLGRNCRFLQ + QR DP
Sbjct: 200 SFVVVDVRRYDHPIVYCSPSFCHLTGYTENQVLGRNCRFLQAPNGHVQRGDARLYTDPAA 259
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-------DDDGTVTHIIGIQI 165
V+ +++ L E Q ++N+KKDGT VN + + PI ++ V + +G Q+
Sbjct: 260 VAHLKKNLSADKECQASIINYKKDGTAFVNLVTVIPIAGGVLGGLHEESDVVYHVGFQV 318
>gi|428312366|ref|YP_007123343.1| PAS domain-containing protein [Microcoleus sp. PCC 7113]
gi|428253978|gb|AFZ19937.1| PAS domain S-box [Microcoleus sp. PCC 7113]
Length = 621
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+++D P+IY N FE TGY+ +++LG+NCRFLQ D + P +D E
Sbjct: 195 ILISDPHQAGNPVIYANSGFERITGYKREDILGKNCRFLQGTDT----KQPALD-----E 245
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ R + +G Q L N++KDGT N L P+RD+ G +TH IG+Q
Sbjct: 246 LHRAIAKGQGTQVVLRNYRKDGTLFWNEFCLNPVRDEAGHLTHFIGVQ 293
>gi|328865608|gb|EGG13994.1| Kelch repeat-containing protein [Dictyostelium fasciculatum]
Length = 460
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 168/424 (39%), Gaps = 49/424 (11%)
Query: 211 GILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWG-------R 263
++L +EV I+S L P D+ +I R + + V K VC+ W R
Sbjct: 58 NFMELPNEVTLR-IISLLDPNDIGNICQTNRTLNMFCEENIVWKAVCKRKWAHSPIFKRR 116
Query: 264 EVTGALELMTKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGG 323
+ + +KKL ++ +CW + G R ++ G + GG
Sbjct: 117 PINSWKDYYSKKLTL------MSDKNGLCWIEIKPSGERPSPRYQNTSTVVGKYIYYIGG 170
Query: 324 EGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL 383
+ + + +D F + ++ E R + PP H+ S++ + FGG G+
Sbjct: 171 QEIPEKRFNDIFRFDTESYTFE-RVIPRHGFPPNFARHSAVSIDHR-IFTFGGF--NGIS 226
Query: 384 NDVFVLDLDAKQPTWIEV-SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAG----VLLSD 438
+ D K +W + S G P+PR+ HS+ +I G + + GG + L D
Sbjct: 227 KHFNLCIFDTKLESWEYIESRGETPIPRTNHSATVI-GKYMYIYGGMYKGNNNQLIFLDD 285
Query: 439 TYLLDLTTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYT 497
+ LD T+ +WR+I PP++ GH L + +L GG + Y
Sbjct: 286 LFCLD--TETLIWRKIYAKGDIPPAKCGHKLMTFDNKLLLFGGGYGLEWEKKYNDVHIY- 342
Query: 498 IDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPS 556
+P + N +T V + P V + +FGG S++ +
Sbjct: 343 ------DPLF-----NTWTKVNVKGNA---PVCTFTIVFNAGPFMFVFGGQSLSDDSLTN 388
Query: 557 QLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELC 616
L+LLD + W ++ P P G V G+ + + GG+ G ++ELH L
Sbjct: 389 DLYLLDTVNME--WSRIDAPSAPHPRDMGSGNMV--GSTMFMFGGYNGS--AIDELHALK 442
Query: 617 LASK 620
+ +
Sbjct: 443 MEKR 446
>gi|300711248|ref|YP_003737062.1| bacterio-opsin activator [Halalkalicoccus jeotgali B3]
gi|448296650|ref|ZP_21486704.1| bacterio-opsin activator [Halalkalicoccus jeotgali B3]
gi|299124931|gb|ADJ15270.1| bacterio-opsin activator [Halalkalicoccus jeotgali B3]
gi|445580943|gb|ELY35309.1| bacterio-opsin activator [Halalkalicoccus jeotgali B3]
Length = 531
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P +ADA D P+IY+N FE TGY +E LG NCRFLQ A+
Sbjct: 15 PIGITIADATREDDPLIYINDAFERLTGYPPEETLGTNCRFLQGERTAAE---------P 65
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ +R +E EL N++KDGT N++ +API +DG VTH +G Q
Sbjct: 66 VATMREAIEAEEPTSVELRNYRKDGTEFWNKVDIAPIH-EDGDVTHFVGFQ 115
>gi|167647259|ref|YP_001684922.1| hypothetical protein Caul_3297 [Caulobacter sp. K31]
gi|167349689|gb|ABZ72424.1| signal transduction histidine kinase [Caulobacter sp. K31]
Length = 360
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T V+ADA D PI+ N+ F TGY A+EV+GRNCRFLQ
Sbjct: 38 TRMPMVIADARHGDHPIVLANQAFLDLTGYGAEEVVGRNCRFLQGAG---------TSDA 88
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+++IR + G E E+LN++KDG+ N+L L+P+ D+ G + +I Q
Sbjct: 89 AIAKIRAAVAAGQECDVEILNYRKDGSDFWNQLHLSPVHDEAGQLLYIFASQ 140
>gi|126665177|ref|ZP_01736160.1| sensory box/GGDEF domain protein [Marinobacter sp. ELB17]
gi|126630547|gb|EBA01162.1| sensory box/GGDEF domain protein [Marinobacter sp. ELB17]
Length = 429
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 69 IIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQ 128
I++ N+ F TGY +E+LGRN R LQ P +P V+ +R CL +G FQ
Sbjct: 38 IVFANQAFLRMTGYNEEELLGRNPRLLQ---------GPATNPDVIDRLRHCLHDGTHFQ 88
Query: 129 GELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G +N++KDG P ++P+R++ G +TH I +Q
Sbjct: 89 GSTINYRKDGRPYTVEWNISPVRNEAGEITHFISLQ 124
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D I +VNK FE TGY EVLGRN + D ++ L++
Sbjct: 155 DSHGTIEFVNKAFETITGYGLTEVLGRNPSMFNSGEQ---------DFEFYKDMWDTLKK 205
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
G ++G +N K+ + + P+ D+ V+H + I
Sbjct: 206 GRSYKGTFVNRGKNNELIYCDETITPLTDEANNVSHYVSI 245
>gi|397569305|gb|EJK46660.1| hypothetical protein THAOC_34663 [Thalassiosira oceanica]
Length = 211
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
SF V D PD PII+ + F TGY E+ GRNCRFLQ + R + V
Sbjct: 86 VSFCVCDHEKPDCPIIFASDGFCKLTGYGHTEIEGRNCRFLQGSETRKED---------V 136
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
IR ++ E LLN+KKDGT N+ LAP+RD D + IG+Q
Sbjct: 137 DRIRSAIKSQTEASVNLLNYKKDGTAFNNQFFLAPLRDADERTAYYIGVQ 186
>gi|58261170|ref|XP_567995.1| White collar 1 protein (WC1) [Cryptococcus neoformans var.
neoformans JEC21]
gi|134115823|ref|XP_773625.1| hypothetical protein CNBI2390 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256251|gb|EAL18978.1| hypothetical protein CNBI2390 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230077|gb|AAW46478.1| White collar 1 protein (WC1), putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 1097
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
SFVV D D PI+Y + F TGY ++LGRNCRFLQ D + + D
Sbjct: 523 SFVVVDIRRYDSPIVYASPNFTRLTGYELPQLLGRNCRFLQSPDGEVTKGSKREYTDNEA 582
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++R LE G E Q L+N++++G P +N + + PI D + + +G QI
Sbjct: 583 VYLLKRSLEAGKECQTSLINYRRNGEPFINLVTVVPIPWDGPDIVYHVGFQI 634
>gi|254500449|ref|ZP_05112600.1| hypothetical protein SADFL11_485 [Labrenzia alexandrii DFL-11]
gi|222436520|gb|EEE43199.1| hypothetical protein SADFL11_485 [Labrenzia alexandrii DFL-11]
Length = 369
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+ADA P P++YVN F TGY +E +GRNC FLQ P DP V +
Sbjct: 21 ITIADAKTPGRPLVYVNPAFLRQTGYSLEEAVGRNCGFLQ---------GPDTDPHTVFQ 71
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R LE + E+LN+KKDGTP N L ++PI+ G + +G Q
Sbjct: 72 LRESLEAEMAICVEVLNYKKDGTPFWNALSISPIKTATGDLVAFVGFQ 119
>gi|424067645|ref|ZP_17805101.1| sensor y box histidine kinase/response regulator [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|408000214|gb|EKG40576.1| sensor y box histidine kinase/response regulator [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
Length = 502
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+V D PD PII+ N+ F TGY ++E++G NCRFLQ P D V
Sbjct: 3 MIVTDPNRPDNPIIFANQAFLEMTGYSSEEIIGSNCRFLQ---------GPDTDRAAVQS 53
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR +EE ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 54 IRDAIEERVDISTEILNYRKDGSSFWNALFISPVYNDAGDLIYFFASQL 102
>gi|323448448|gb|EGB04346.1| hypothetical protein AURANDRAFT_32655 [Aureococcus anophagefferens]
Length = 140
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SF + D D PI+Y + F TGY DEV+G+NCRFLQ P P V+
Sbjct: 10 SFCITDPSLKDNPIVYASASFLSTTGYPLDEVIGKNCRFLQ---------GPGTFPGTVA 60
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
E+ + + EG + +LN+KKDGTP N+L +A +RD + V + +G+QI
Sbjct: 61 ELAKGIAEGTDTTVTILNYKKDGTPFWNQLFVASLRDINKRVVNYVGVQI 110
>gi|374622069|ref|ZP_09694597.1| sensory box protein [Ectothiorhodospira sp. PHS-1]
gi|373941198|gb|EHQ51743.1| sensory box protein [Ectothiorhodospira sp. PHS-1]
Length = 159
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 9/106 (8%)
Query: 59 VADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIR 118
+A+ D +IYVN+ FE TGYRADE+L ++CRFLQ D D +++IR
Sbjct: 25 IAEREGEDTILIYVNEGFERLTGYRADEILYQDCRFLQNDDR---------DQTALAQIR 75
Query: 119 RCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+E GI + L N++KDG+ N L + P+ +D+ +T+ IGIQ
Sbjct: 76 DAMERGIPCRVRLRNYRKDGSLFWNELSITPVFNDEDRLTYYIGIQ 121
>gi|325188275|emb|CCA22815.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 420
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 125/289 (43%), Gaps = 40/289 (13%)
Query: 293 WRKFTVRGAVEPS-RCNFSACAAGN--RLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRV 349
W + + P R + + CA+ + +L L+GG G + + +L D W V
Sbjct: 97 WEQIDTFNGISPDGRASHAWCASSDEGKLYLYGGSGPHWGQTNMGKLLQFDIKKRNWSIV 156
Query: 350 -SVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTW-IEVSGGAPP 407
S S+PP +G +L ++N L +FGG +ND+++ D K W E + G P
Sbjct: 157 DSHGSNPPPGYGQSLCAINQK-LYLFGGTSGHVYVNDLYIFDEIGK--VWKKEETSGQRP 213
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS-WSPPSRLGH 466
PR H + + ++ GG D D + LD+ D +W + +S + P SR+ H
Sbjct: 214 SPRYKHQTIAVGNRMYLIGGGLYDPPKGPIDVFYLDV--DTLVWHRVKSSGFVPRSRIAH 271
Query: 467 SLSVYGR---TKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSA 523
++ R T++LMFGG SG RS E D+ E W+ + S +
Sbjct: 272 TICKTERSENTRILMFGGRDDSGS---RSNELSEFDV--ETESWRLI---------SHQS 317
Query: 524 VVPPPRLDHVAVSMPCGRIIIFGGS-----------IAGLHSPSQLFLL 561
P P H A+ M ++ +FGGS +H PS L L
Sbjct: 318 GQPDPCDFHTAI-MYQDQMFVFGGSNGLERNNNVYRYTAIHQPSTLATL 365
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 111/282 (39%), Gaps = 25/282 (8%)
Query: 345 EWRRVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSG 403
W +S P R GH+ S + GS + +FGG ND++ DL I+
Sbjct: 46 NWDNLSTSGYRPAVRSGHS-SLVVGSTMYIFGGYNEGNCHNDIYEFDLLRHHWEQIDTFN 104
Query: 404 GAPPLPRSWHSSCI-IEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-PP 461
G P R+ H+ C + KL + GG + LL K W + + S PP
Sbjct: 105 GISPDGRASHAWCASSDEGKLYLYGGSGPHWGQTNMGKLLQFDIKKRNWSIVDSHGSNPP 164
Query: 462 SRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQ 521
G SL + K+ +FGG SGH+ + + Y D + WK+ E
Sbjct: 165 PGYGQSLCAINQ-KLYLFGG--TSGHVYV--NDLYIFD--EIGKVWKKEET--------- 208
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
S P PR H +++ +I GG P +F LD + W + G P+
Sbjct: 209 SGQRPSPRYKHQTIAVGNRMYLIGGGLYDPPKGPIDVFYLDV--DTLVWHRVKSSGFVPR 266
Query: 582 FAWGHSTCVV---GGTRVLVLGGHTGEEWVLNELHELCLASK 620
H+ C TR+L+ GG NEL E + ++
Sbjct: 267 SRIAHTICKTERSENTRILMFGGRDDSGSRSNELSEFDVETE 308
>gi|302846732|ref|XP_002954902.1| hypothetical protein VOLCADRAFT_65257 [Volvox carteri f.
nagariensis]
gi|218218151|gb|ACK76426.1| smallest phototropin-like protein [synthetic construct]
gi|300259877|gb|EFJ44101.1| hypothetical protein VOLCADRAFT_65257 [Volvox carteri f.
nagariensis]
Length = 133
Score = 80.1 bits (196), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 59 VADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIR 118
+AD PD P+IY N F TGY + V+G+NCRFLQ Q V E++
Sbjct: 10 IADCSMPDMPLIYANAGFVRTTGYSVEYVIGKNCRFLQGEGTDGQP---------VQELK 60
Query: 119 RCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDD-DGTVTHIIGIQ 164
+++G +LLN+KK+G P VN L L PI D G +TH +G+Q
Sbjct: 61 EAIKQGRACVVQLLNYKKNGDPFVNYLSLTPIYDTATGRLTHYVGVQ 107
>gi|307105056|gb|EFN53307.1| hypothetical protein CHLNCDRAFT_136977 [Chlorella variabilis]
Length = 625
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 144/345 (41%), Gaps = 47/345 (13%)
Query: 287 TLEAVCWRKFTVRGAVEPS-RCNFSACAAG-------NRLVLFGGEGVNMQPMDDTFVLN 338
L+ V R A +P+ RC SA LV+FGG + + +DD VL
Sbjct: 2 ALDTVRARWMEASYANQPAARCGHSAVTVNAVPTWGEEFLVVFGGIDRHKEALDDLAVLQ 61
Query: 339 LDAANPEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGG------CGRQGLLNDVFVLDLD 392
+ W + P +++ GS + +FGG + D++ LD D
Sbjct: 62 CE--QEAWFAPEKAAVGPAARAFHAAAVIGSKMYLFGGHVYVKQLHKLHQFADLWCLDTD 119
Query: 393 AKQPTWIEVSGGAP----PLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDK 448
+ W +SG AP P PR + C + GS+L+V GG L D +L DL ++
Sbjct: 120 TWR--WSRLSGEAPEAPQPCPRDRAAMCAVGGSRLLVVGGADSMNRRLDDAWLFDL--ER 175
Query: 449 PMWREIPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWK 508
W E+ + + P + ++VLMFGG L S GD QW
Sbjct: 176 GTWSEVKLAGARPRARCCTALFSLESRVLMFGGDTYGVTNELWSLRGLE---GDGPAQWT 232
Query: 509 QLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-----SIAGLHSPSQ----LF 559
QL+ PPPR H AV++ ++ GG S+ G+ S S+ +
Sbjct: 233 QLQLE---------GPAPPPRRGH-AVAVTGSWVVFVGGLTEQRSLMGMKSRSEYLSDVV 282
Query: 560 LLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTG 604
+LD +E+ +WR + + PP H+ + G R+L+ GG G
Sbjct: 283 ILD-RQERVAWRGVELASPPPAPREKHTLTALAGGRLLLFGGTDG 326
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 34/269 (12%)
Query: 293 WRKFTVRGAVEPSRC---NFSACAAG-NRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR 348
W + + P C + CA G +RL++ GG + +DD ++ +L+ W
Sbjct: 123 WSRLSGEAPEAPQPCPRDRAAMCAVGGSRLLVVGGADSMNRRLDDAWLFDLERGT--WSE 180
Query: 349 VSVKSS-PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVL-DLDAKQP---TWIEVSG 403
V + + P R L SL S +++FGG G+ N+++ L L+ P T +++ G
Sbjct: 181 VKLAGARPRARCCTALFSLE-SRVLMFGG-DTYGVTNELWSLRGLEGDGPAQWTQLQLEG 238
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVL---------LSDTYLLDLTTDKPMWREI 454
APP PR H+ + GS +V GG T+ L LSD +LD ++ WR +
Sbjct: 239 PAPP-PRRGHAVAVT-GSWVVFVGGLTEQRSLMGMKSRSEYLSDVVILD-RQERVAWRGV 295
Query: 455 PTSWSPPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECN 513
+ PP+ R H+L+ ++L+FGG + L G+++ +DL D P L
Sbjct: 296 ELASPPPAPREKHTLTALAGGRLLLFGGTDGTSTL----GDAWWLDLEDIAPPQPDLLSV 351
Query: 514 AFTGVGSQSAVVPPPRLDHV-AVSMPCGR 541
A + SA PPP + A+ +P G+
Sbjct: 352 ADL---ADSASQPPPEVTAAPALPLPPGK 377
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 27/201 (13%)
Query: 265 VTGALELMTKKL--GWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFG 322
V G + M ++L W L LE W + + GA +RC + + +R+++FG
Sbjct: 154 VVGGADSMNRRLDDAW------LFDLERGTWSEVKLAGARPRARCCTALFSLESRVLMFG 207
Query: 323 GEGVNMQPMDDTFVLN-LDAANP-EWRRVSVKS-SPPGRWGHTLSSLNGSWLVVFGGC-- 377
G+ + ++ + L L+ P +W ++ ++ +PP R GH + ++ GSW+V GG
Sbjct: 208 GDTYGV--TNELWSLRGLEGDGPAQWTQLQLEGPAPPPRRGHAV-AVTGSWVVFVGGLTE 264
Query: 378 --------GRQGLLNDVFVLDLDAKQPTWIEVS-GGAPPLPRSWHSSCIIEGSKLVVSGG 428
R L+DV +LD + W V PP PR H+ + G +L++ GG
Sbjct: 265 QRSLMGMKSRSEYLSDVVILDRQERV-AWRGVELASPPPAPREKHTLTALAGGRLLLFGG 323
Query: 429 CTDAGVLLSDTYLLDLTTDKP 449
TD L D + LDL P
Sbjct: 324 -TDGTSTLGDAWWLDLEDIAP 343
>gi|289208470|ref|YP_003460536.1| PAS/PAC sensor protein [Thioalkalivibrio sp. K90mix]
gi|288944101|gb|ADC71800.1| putative PAS/PAC sensor protein [Thioalkalivibrio sp. K90mix]
Length = 147
Score = 80.1 bits (196), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 67/115 (58%), Gaps = 9/115 (7%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
V+A+ D +IYVN+ FE TGYR++E+L R+CRFLQ D + R +EI
Sbjct: 22 VIAEREGDDNILIYVNRAFEKLTGYRSEEILYRDCRFLQGDDTDQEAR---------TEI 72
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
R ++E + L N++KDG+ N L L P+ +D+ +T+ IGIQ A+I+
Sbjct: 73 RAAIQENRPCRVTLRNYRKDGSLFWNELSLTPVFNDEDHLTYYIGIQKDITARIE 127
>gi|448561065|ref|ZP_21634417.1| PAS-PAC-PAC sensing histidine kinase [Haloferax prahovense DSM
18310]
gi|445721297|gb|ELZ72965.1| PAS-PAC-PAC sensing histidine kinase [Haloferax prahovense DSM
18310]
Length = 871
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D D P+ Y+N FE TGY EVLGRNCRFLQ + D V ++ +E
Sbjct: 177 DDDQPLTYINDAFEEMTGYDRSEVLGRNCRFLQGEE---------TDSEPVEKLHEAIEA 227
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G L N++KDGTP N L+++P+ +DG +TH +G Q
Sbjct: 228 GESVAVSLTNYRKDGTPFWNELKISPVY-EDGELTHFVGFQ 267
>gi|452207589|ref|YP_007487711.1| sensor box histidine kinase [Natronomonas moolapensis 8.8.11]
gi|452083689|emb|CCQ37003.1| sensor box histidine kinase [Natronomonas moolapensis 8.8.11]
Length = 583
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P V D P+IY+N F TGY +E LGRNCRFLQ + R +
Sbjct: 127 PVGITVVDVTLDHEPLIYINDGFIDMTGYSRNEALGRNCRFLQGEETRDEP--------- 177
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ +R ++ EL N++KDGT NR+RL+P+ ++DGTVT +G Q
Sbjct: 178 VARMRAAIDAEQPVTVELRNYRKDGTEFWNRIRLSPVENNDGTVTRYLGFQ 228
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 9/121 (7%)
Query: 44 KPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQ 103
K LLF + V D D I YVN FE TGY A E +GR R L +
Sbjct: 239 KELLLFETYAEQADSVLFITDADGTIRYVNPAFERTTGYSAAEAIGRTPRMLNSGEQ--- 295
Query: 104 RRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
D + G ++ +++N +K G R+ PI DD GT+ + + +
Sbjct: 296 ------DEAFYEAFWETIAAGETWEADIVNQRKTGERYETIQRVTPIEDDRGTIQYYVAL 349
Query: 164 Q 164
+
Sbjct: 350 E 350
>gi|448653703|ref|ZP_21681301.1| HTR-like protein [Haloarcula californiae ATCC 33799]
gi|445767291|gb|EMA18398.1| HTR-like protein [Haloarcula californiae ATCC 33799]
Length = 837
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P +ADA PD P++Y N F TGY+ + ++G+N RFLQ + DP
Sbjct: 269 PVGITIADANRPDNPLVYANDKFSELTGYQEENIVGQNSRFLQGEN---------TDPGP 319
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+E+R ++ EL N++KDGT NR+ +AP+ D G VT+ IG Q
Sbjct: 320 VAEMREAIDAEEPVTVELQNYRKDGTEFWNRVTIAPVTDGTGEVTNYIGFQ 370
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFL---QYRDPRAQRRHPLVDPVVVSEIRRC 120
DPD I YVN FE TGY ++E +G+ R L + D +R +
Sbjct: 401 DPDGIITYVNPAFERVTGYESEEAVGQTPRILKSGEMSDEYYER------------LWST 448
Query: 121 LEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+ G ++ E+ + +K G +AP+ DD+G + + IQ
Sbjct: 449 ISSGDVWEEEIQDKRKSGEVYYAHQTIAPLTDDNGEIEAYVAIQ 492
>gi|302835379|ref|XP_002949251.1| hypothetical protein VOLCADRAFT_59125 [Volvox carteri f.
nagariensis]
gi|300265553|gb|EFJ49744.1| hypothetical protein VOLCADRAFT_59125 [Volvox carteri f.
nagariensis]
Length = 108
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+ DA PD PI+Y NK F TGY +EV+GRNCRFLQ RD P V
Sbjct: 5 ITITDASAPDHPIVYTNKAFLSMTGYSREEVVGRNCRFLQGRD---------TSPAAVRT 55
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAP-IRDDDGTVTHIIGIQ 164
IR L +LLN+ +DGT N LRL P + G + IG+Q
Sbjct: 56 IREALARHQPVTVQLLNYTRDGTAFWNELRLEPVVAPYSGKLLAYIGVQ 104
>gi|409406269|ref|ZP_11254731.1| PAS/PAC sensor hybrid histidine kinase [Herbaspirillum sp. GW103]
gi|386434818|gb|EIJ47643.1| PAS/PAC sensor hybrid histidine kinase [Herbaspirillum sp. GW103]
Length = 546
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T +V+D PD PII+VN F TGY EV+G+NCRFLQ P D
Sbjct: 46 TRMPMIVSDPNKPDNPIIFVNNAFMNMTGYSRAEVVGKNCRFLQ---------GPETDRS 96
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV+++R+ + E E ELLN++K+G+ N L ++P+ D G + + Q+
Sbjct: 97 VVAQVRQAVAERREMATELLNYRKNGSTFWNALFISPVYDQRGELKYFFSSQL 149
>gi|304320339|ref|YP_003853982.1| sensory box histidine kinase [Parvularcula bermudensis HTCC2503]
gi|303299241|gb|ADM08840.1| sensory box histidine kinase [Parvularcula bermudensis HTCC2503]
Length = 367
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P S V+ D D PIIYVN+ FE+ TGY VLGRNCRFLQ RD +
Sbjct: 30 PMSLVLTDPHRADNPIIYVNRAFEVMTGYSLSYVLGRNCRFLQ-RDGAEEE--------A 80
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R +++ Q ++ N++ DG+ NRL ++PI D + + +GIQ
Sbjct: 81 TKRLRAAIDKREPVQVDITNYRFDGSAFTNRLSVSPIYDSNNDLYAFVGIQ 131
>gi|223997956|ref|XP_002288651.1| hypothetical protein THAPSDRAFT_261631 [Thalassiosira pseudonana
CCMP1335]
gi|220975759|gb|EED94087.1| hypothetical protein THAPSDRAFT_261631 [Thalassiosira pseudonana
CCMP1335]
Length = 150
Score = 79.7 bits (195), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/113 (41%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
+T S V D D PI+YV+ F TGY D+V+GRNCRFLQ P +R VD
Sbjct: 11 STTVSLCVTDPSLVDNPIVYVSNGFCQLTGYSYDDVIGRNCRFLQ--GPETRRED--VDK 66
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+VV+ ++ G+E LLN+KKDGT N LA +R +++ IGIQ
Sbjct: 67 IVVA-----VKGGVECSVNLLNYKKDGTTFRNEFYLAQLRSPTQDISYFIGIQ 114
>gi|146185638|ref|XP_001032224.2| Kelch motif family protein [Tetrahymena thermophila]
gi|146142850|gb|EAR84561.2| Kelch motif family protein [Tetrahymena thermophila SB210]
Length = 960
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 36/272 (13%)
Query: 352 KSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV-SGGAPPLPR 410
K P RWGH+ N L +FGG +ND +V DL++ Q WI + + G P R
Sbjct: 44 KEIPSARWGHSFVKANNDLLYLFGGYAESNYMNDQWVFDLNSFQ--WIALPNYGNIPEKR 101
Query: 411 SWHSSCIIE-GSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHSLS 469
S HS C +E +K+++ GG +D +L D+ + ++ S R HS +
Sbjct: 102 SNHSGCYLEQKNKILIFGGGGKEKKRFNDVHLYDIDNSNWEYLKVQNSDLITPRTYHSAN 161
Query: 470 VYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPR 529
++ +++FGG G L + ++L ++EP W L+ +G VPP R
Sbjct: 162 LFFDKYLVVFGGEG-VGDL----NDLCVLNL-EQEPSWILLQ-----PLGK----VPPKR 206
Query: 530 LDHVAVSMPCGRIIIFGGSIAGLHSPSQL-------FLLDPSEEKPSWRIL---NVPGQP 579
H + ++ ++ I GG + + +L DP + WR + N QP
Sbjct: 207 RFHSSATVQ-NKLYILGGCFSNYRCHDDIWELNIGEYLQDPHNTQLEWRQIIHYNHVFQP 265
Query: 580 PKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNE 611
WG + V ++ + GG ++ LNE
Sbjct: 266 ---RWGQCSQVYDD-KIYIFGGRNLKD--LNE 291
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 288 LEAVCWRKFTVRGAVEPSRCNFSAC--AAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPE 345
L + W G + R N S C N++++FGG G + +D + ++D +N E
Sbjct: 83 LNSFQWIALPNYGNIPEKRSNHSGCYLEQKNKILIFGGGGKEKKRFNDVHLYDIDNSNWE 142
Query: 346 WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS--G 403
+ +V R H+ + +LVVFGG G G LND+ VL+L+ ++P+WI + G
Sbjct: 143 YLKVQNSDLITPRTYHSANLFFDKYLVVFGGEGV-GDLNDLCVLNLE-QEPSWILLQPLG 200
Query: 404 GAPPLPRSWHSSCIIEGSKLVVSGGC-------TDAGVLLSDTYLLDLTTDKPMWREI-- 454
PP R +HSS ++ KL + GGC D L YL D + WR+I
Sbjct: 201 KVPP-KRRFHSSATVQN-KLYILGGCFSNYRCHDDIWELNIGEYLQDPHNTQLEWRQIIH 258
Query: 455 -PTSWSPPSRLGHSLSVYGRTKVLMFGG 481
+ P R G VY K+ +FGG
Sbjct: 259 YNHVFQP--RWGQCSQVYD-DKIYIFGG 283
>gi|308807791|ref|XP_003081206.1| PAS (ISS) [Ostreococcus tauri]
gi|116059668|emb|CAL55375.1| PAS (ISS) [Ostreococcus tauri]
Length = 933
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+AD PD P+IY N FE TGY E LG+NCRFLQ P D + +
Sbjct: 112 ITIADFSKPDQPLIYANIGFESMTGYSVQETLGKNCRFLQ---------GPGTDLKELGK 162
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+R + +G L N+KK G +N+L L PIRD +G V + +GIQ
Sbjct: 163 VRAAITKGEACTVVLKNYKKSGEEFMNQLSLTPIRDGEGNVMYYVGIQ 210
>gi|149276757|ref|ZP_01882900.1| two-component hybrid sensor and regulator [Pedobacter sp. BAL39]
gi|149232426|gb|EDM37802.1| two-component hybrid sensor and regulator [Pedobacter sp. BAL39]
Length = 512
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 45 PGLLF--YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRA 102
P LL T V+ D PD PIIY N FE +GY DE++GRNCRFLQ D
Sbjct: 12 PALLVKVLEAANTGVVITDNLLPDNPIIYCNPAFEQLSGYSRDEIIGRNCRFLQSSDRSQ 71
Query: 103 QRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIG 162
Q R +IR ++ G ++ N+ K G N L L+ ++++ G VT+ IG
Sbjct: 72 QARF---------DIRAAIDAGENCVVQVRNYTKTGVLFHNELYLSAVKNESGEVTNFIG 122
Query: 163 IQIFSEAKIDLNHVSYPVFKE-NCNQQYDQSAQ 194
IQ N VS V E + Q Y ++ Q
Sbjct: 123 IQ---------NDVSARVKAEQDLEQNYRETEQ 146
>gi|452838412|gb|EME40353.1| hypothetical protein DOTSEDRAFT_74976 [Dothistroma septosporum
NZE10]
Length = 1106
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPLVDP 111
+FVV DA DFPI+Y + FE TGY +LGRNCRFLQ D P +R++ VD
Sbjct: 431 AFVVCDAEKDDFPIVYCSDNFERLTGYTKHMILGRNCRFLQSPDGNVSPGVKRKY--VDD 488
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++ + E Q L+N+++ G P +N L + PI D V +G Q+
Sbjct: 489 DSVLYLKNMINMRRESQISLINYRRGGQPFMNLLTMIPISWDTDQVKFFVGFQV 542
>gi|405119674|gb|AFR94446.1| white collar 1 protein [Cryptococcus neoformans var. grubii H99]
Length = 1143
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
SFVV D D PI+Y + F TGY ++LGRNCRFLQ + + + D
Sbjct: 569 SFVVVDIRRYDSPIVYASPNFTRLTGYELPQLLGRNCRFLQSPNGEVAKGSKREYTDNEA 628
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKIDL 173
V ++R LE G E Q LLN++++G P +N + + PI D + + +G Q IDL
Sbjct: 629 VYLLKRSLEAGKECQTSLLNYRRNGEPFINLVTVVPIPWDGPEIVYHVGFQ------IDL 682
Query: 174 NHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVL 220
+ + N Y Y PL I LS VL
Sbjct: 683 VEQPNKILRNMQNGNYSVDYTYSIPPEKPLQLDGKGAAIAGLSTAVL 729
>gi|154291032|ref|XP_001546103.1| hypothetical protein BC1G_15404 [Botryotinia fuckeliana B05.10]
Length = 697
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
F + D PD PI++ ++ F T Y VLGRNCRFLQ P +P V
Sbjct: 300 FCLTDPSRPDNPIVFASEEFHRTTQYGMSYVLGRNCRFLQ---------GPKTNPFSVRR 350
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
IR +E G E LN+++DG+P +N L AP+ D GT+ + IG Q+
Sbjct: 351 IREKIEAGQEHCETFLNYRRDGSPFMNLLMCAPLCDSRGTIRYFIGAQV 399
>gi|289626532|ref|ZP_06459486.1| histidine kinase, partial [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289649213|ref|ZP_06480556.1| histidine kinase [Pseudomonas syringae pv. aesculi str. 2250]
Length = 452
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D D PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 30 TTRMPMIVTDPNRADNPIIFSNRAFLEMTGYSSEEIIGTNCRFLQ---------GPETDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV IR ++E ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AVVQSIREAIDERVDISTEILNYRKDGSTFWNALFISPVYNDAGDLIYFFASQL 134
>gi|302879861|ref|YP_003848425.1| PAS/PAC sensor-containing diguanylate cyclase [Gallionella
capsiferriformans ES-2]
gi|302582650|gb|ADL56661.1| diguanylate cyclase with PAS/PAC sensor [Gallionella
capsiferriformans ES-2]
Length = 312
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 9/115 (7%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
+ADA D+P+IYVN FE +GY A E++G+ RFLQ D D ++
Sbjct: 23 ITIADARQQDWPLIYVNAGFEKLSGYSAAELIGKPVRFLQGTD---------TDQAEIAV 73
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
+R L G+ L N+++DGT N L ++PIRD G +TH +GIQ A++
Sbjct: 74 LRESLLTGVSCLVTLRNYRRDGTLFWNELSISPIRDKTGELTHFVGIQKDVTARV 128
>gi|416016882|ref|ZP_11564119.1| histidine kinase [Pseudomonas syringae pv. glycinea str. B076]
gi|416027004|ref|ZP_11570335.1| histidine kinase [Pseudomonas syringae pv. glycinea str. race 4]
gi|416028131|ref|ZP_11571231.1| histidine kinase [Pseudomonas syringae pv. glycinea str. race 4]
gi|422407611|ref|ZP_16484577.1| histidine kinase [Pseudomonas syringae pv. glycinea str. race 4]
gi|221272073|sp|Q48IV1.2|LOVHK_PSE14 RecName: Full=Blue-light-activated protein; Includes: RecName:
Full=Blue-light-activated histidine kinase; Includes:
RecName: Full=Response regulator
gi|320324090|gb|EFW80172.1| histidine kinase [Pseudomonas syringae pv. glycinea str. B076]
gi|320327829|gb|EFW83836.1| histidine kinase [Pseudomonas syringae pv. glycinea str. race 4]
gi|320328665|gb|EFW84665.1| histidine kinase [Pseudomonas syringae pv. glycinea str. race 4]
gi|330885482|gb|EGH19631.1| histidine kinase [Pseudomonas syringae pv. glycinea str. race 4]
Length = 534
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D D PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 30 TTRMPMIVTDPNRADNPIIFSNRAFLEMTGYSSEEIIGTNCRFLQ---------GPETDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV IR ++E ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AVVQSIREAIDERVDISTEILNYRKDGSTFWNALFISPVYNDAGDLIYFFASQL 134
>gi|448584367|ref|ZP_21647241.1| HTR-like protein [Haloferax gibbonsii ATCC 33959]
gi|445728265|gb|ELZ79871.1| HTR-like protein [Haloferax gibbonsii ATCC 33959]
Length = 369
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
+ VV D PD P++Y N+ FE TGY A V GRNC FL P DP V
Sbjct: 258 VAIVVIDPSKPDNPVVYCNEAFEALTGYDAAAVEGRNCGFLH---------GPETDPETV 308
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+EIR ++ G E+ ++ DG P N L + P+RDD+ + IG
Sbjct: 309 AEIRSAIDAGEPISAEIRSYDADGEPFWNHLDIQPVRDDEDALDFFIGFH 358
>gi|422580175|ref|ZP_16655643.1| histidine kinase, partial [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330870611|gb|EGH05320.1| histidine kinase [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 446
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D D PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 30 TTRMPMIVTDPNRADNPIIFSNRAFLEMTGYSSEEIIGTNCRFLQ---------GPETDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV IR ++E ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AVVQSIREAIDERVDISTEILNYRKDGSTFWNALFISPVYNDAGDLIYFFASQL 134
>gi|257484183|ref|ZP_05638224.1| histidine kinase [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|422678915|ref|ZP_16737189.1| histidine kinase [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|331008262|gb|EGH88319.1| histidine kinase [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 534
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D D PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 30 TTRMPMIVTDPNRADNPIIFSNRAFLEMTGYSSEEIIGTNCRFLQ---------GPETDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV IR ++E ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AVVQSIREAIDERVDISTEILNYRKDGSTFWNALFISPVYNDAGDLIYFFASQL 134
>gi|116179528|ref|XP_001219613.1| hypothetical protein CHGG_00392 [Chaetomium globosum CBS 148.51]
gi|88184689|gb|EAQ92157.1| hypothetical protein CHGG_00392 [Chaetomium globosum CBS 148.51]
Length = 993
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD--PRAQRRHPLVDPVV 113
+FVV D D PIIYV+ F+ TGY E++G+NCRFLQ A R V
Sbjct: 364 AFVVTDVTLNDCPIIYVSDNFQNLTGYNRHEIVGKNCRFLQSPSGVVEAGSRREFVANDA 423
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ + EG E Q L+N++K G P +N L + PI + + + IG QI
Sbjct: 424 VFKLKNAVAEGKEIQQSLINYRKGGKPFLNLLTMIPIPWETDEIKYCIGFQI 475
>gi|242814453|ref|XP_002486372.1| GATA transcription factor LreA [Talaromyces stipitatus ATCC 10500]
gi|218714711|gb|EED14134.1| GATA transcription factor LreA [Talaromyces stipitatus ATCC 10500]
Length = 960
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 20/160 (12%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR----DPRAQRRHPLVDP 111
+F++ D D PIIYV+ FE TGY E+LGRNCRFLQ DP +R++ VD
Sbjct: 343 AFILCDITSHDDPIIYVSDAFERLTGYTRHEILGRNCRFLQSPDGKVDPGTKRKY--VDN 400
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKI 171
V ++ ++ E Q ++N++K G +N L + PI + +G Q +
Sbjct: 401 QTVYRLKEKIQARAEVQVSMINYRKGGQSFMNLLTMIPINWNSTDYRFYVGFQ------V 454
Query: 172 DLNHVSYPVFKENC------NQQYDQSAQYFSGGHSPLSQ 205
DL + V K N N Q DQ ++Y H+P S+
Sbjct: 455 DLVEQPHAVTKRNADGSYSINYQRDQLSRYVL--HAPESR 492
>gi|448456461|ref|ZP_21595230.1| bacterio-opsin activator [Halorubrum lipolyticum DSM 21995]
gi|445811937|gb|EMA61934.1| bacterio-opsin activator [Halorubrum lipolyticum DSM 21995]
Length = 667
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
P ++D D+P++Y N+ + TGY +E LGRN RFLQ P DP
Sbjct: 149 APVGISISDPDLSDYPLVYANEAWIEHTGYPIEEALGRNPRFLQ---------GPGTDPE 199
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V I + E E E+ N+++DGTP N L +AP+ D DG + H +G Q
Sbjct: 200 TVERIAEAVAENEEITVEIRNYRRDGTPFWNELTVAPVYDGDGDLAHYVGFQ 251
>gi|448452034|ref|ZP_21593127.1| HTR-like protein [Halorubrum litoreum JCM 13561]
gi|445809942|gb|EMA59977.1| HTR-like protein [Halorubrum litoreum JCM 13561]
Length = 596
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 81/173 (46%), Gaps = 26/173 (15%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P + D D P++YVN F TGY +E +G NCRFLQ D +
Sbjct: 268 PVGITITDPAREDNPMVYVNDRFVEMTGYDREESIGVNCRFLQGPDTEEES--------- 318
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ----IFSEA 169
V E+R ++ ELLN++KDGT NR+ +API D DG VTH +G Q F E
Sbjct: 319 VQELREAIDAEESTSVELLNYRKDGTEFWNRVSIAPICDADGAVTHWVGFQEDITAFKER 378
Query: 170 KIDLNHVSYPVFKENCNQQYDQSAQYFSGG-HSPLSQHQDICGILQLSDEVLA 221
+ L E N + D A S +PL+ Q G +QL+ + +A
Sbjct: 379 EAAL---------ERQNDRLDSFASIVSHDLRNPLNVAQ---GRVQLAQDAVA 419
>gi|71733399|ref|YP_274680.1| histidine kinase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71553952|gb|AAZ33163.1| sensory box histidine kinase/response regulator [Pseudomonas
syringae pv. phaseolicola 1448A]
Length = 507
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D D PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 3 TTRMPMIVTDPNRADNPIIFSNRAFLEMTGYSSEEIIGTNCRFLQ---------GPETDR 53
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV IR ++E ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 54 AVVQSIREAIDERVDISTEILNYRKDGSTFWNALFISPVYNDAGDLIYFFASQL 107
>gi|66045936|ref|YP_235777.1| histidine kinase [Pseudomonas syringae pv. syringae B728a]
gi|75501925|sp|Q4ZSY3.1|LOVHK_PSEU2 RecName: Full=Blue-light-activated protein; Includes: RecName:
Full=Blue-light-activated histidine kinase; Includes:
RecName: Full=Response regulator
gi|63256643|gb|AAY37739.1| PAS [Pseudomonas syringae pv. syringae B728a]
Length = 534
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D PD PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 30 TTRMPMIVTDPNRPDNPIIFANRAFLEMTGYASEEIIGSNCRFLQ---------GPDTDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V IR +++ ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 TAVQSIRDAIDQRVDISTEILNYRKDGSSFWNALFISPVYNDAGELIYFFASQL 134
>gi|298158507|gb|EFH99574.1| Signal transduction histidine kinase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 534
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 52 TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDP 111
TT +V D D PII+ N+ F TGY ++E++G NCRFLQ P D
Sbjct: 30 TTRMPMIVTDPNRADNPIIFSNRAFLEMTGYSSEEIIGTNCRFLQ---------GPETDR 80
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
VV IR ++E ++ E+LN++KDG+ N L ++P+ +D G + + Q+
Sbjct: 81 AVVQSIREAIDERVDISTEILNYRKDGSTFWNALFISPVYNDAGDLIYFFASQL 134
>gi|332527012|ref|ZP_08403097.1| PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase [Rubrivivax benzoatilyticus
JA2]
gi|332111447|gb|EGJ11430.1| PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase [Rubrivivax benzoatilyticus
JA2]
Length = 687
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 12/124 (9%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D + YVN F TGY A+E++G +C LQ P V +R L+
Sbjct: 27 DANRRTTYVNAAFVELTGYSAEEMIGSSCALLQ---------GPGTSADTVQAMRAALDR 77
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID-LNHVSYP--V 180
G F ELLN++KDGTP N L++ P+ DDGT+T +G+Q A+ D +N +S V
Sbjct: 78 GEPFHAELLNYRKDGTPFWNELKIVPVHADDGTLTQFVGVQRDVTARRDAMNKLSLAARV 137
Query: 181 FKEN 184
F+++
Sbjct: 138 FEQS 141
>gi|428172480|gb|EKX41389.1| hypothetical protein GUITHDRAFT_164415 [Guillardia theta CCMP2712]
Length = 325
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 288 LEAVCWRKFTVRGAVEP--SRCNFSACAAGNRLVLFGGEGVNMQPMDDT-FVLNLDAANP 344
L + W+K A++P R + N +FGGE V P+D T F L+L A+
Sbjct: 2 LPSYTWKKLE---AIDPPVQRSSHGISCINNVAYVFGGEHVARTPIDSTVFKLDLSASPL 58
Query: 345 EWRRVSVKSS-PPGRWGHTLSSLNGSWLVVFGGCGRQGL------LNDVFVLDLDAKQPT 397
+W+ ++ + PP R H +++ GS + +FG GRQG+ L D++ D+ + +
Sbjct: 59 KWQAMAAEGDVPPPRVAHAQAAV-GSKIYIFG--GRQGIGMSEAPLADMYEFDVAVNRWS 115
Query: 398 WIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS 457
+E GG+PP RS+H + G L V GGC +G LSD + D T++ W ++P+S
Sbjct: 116 LVEAKGGSPPACRSFHRMVAV-GKDLYVFGGCGTSG-RLSDLHRFD--TEQKTWEQMPSS 171
Query: 458 WSPPSRLGHSLSVYGRTKVLMFG 480
R G SL GR ++ G
Sbjct: 172 DKILGRGGASLLHAGRELFVVAG 194
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 121/284 (42%), Gaps = 30/284 (10%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGG-EGVNMQ--PMDDTFVLNLDAANPEWRRV 349
W+ G V P R + A G+++ +FGG +G+ M P+ D + D A W V
Sbjct: 60 WQAMAAEGDVPPPRVAHAQAAVGSKIYIFGGRQGIGMSEAPLADMY--EFDVAVNRWSLV 117
Query: 350 SVKS-SPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPP 407
K SPP R H + ++ G L VFGGCG G L+D+ D +Q TW ++
Sbjct: 118 EAKGGSPPACRSFHRMVAV-GKDLYVFGGCGTSGRLSDLH--RFDTEQKTWEQMPSSDKI 174
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPSRLGHS 467
L R +S + G +L V G + G ++D + DL++ W EI S P G S
Sbjct: 175 LGRG-GASLLHAGRELFVVAGFS--GKEMNDAHAFDLSSRA--WTEI----SVPDLRGRS 225
Query: 468 L---SVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
+ G+ + FGG ++ DL K L + +
Sbjct: 226 VCGDCCLGQFACV-FGGEVDPSDRGHEGAGAFANDLVLIHTTSKTL----VVPTPEEGSE 280
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQ---LFLLDPSE 565
PPPR + G+ I+FGG +P++ L++L+ E
Sbjct: 281 APPPRGWTAMAAASEGKAILFGGLSGDDENPTRMNDLYMLELKE 324
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 88/225 (39%), Gaps = 20/225 (8%)
Query: 397 TWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPT 456
TW ++ PP+ RS H I V G + S + LDL+ W+ +
Sbjct: 6 TWKKLEAIDPPVQRSSHGISCINNVAYVFGGEHVARTPIDSTVFKLDLSASPLKWQAMAA 65
Query: 457 SWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAF 515
PP R+ H+ + G +K+ +FGG G + Y D+ N +
Sbjct: 66 EGDVPPPRVAHAQAAVG-SKIYIFGGRQGIGMSEAPLADMYEFDVA----------VNRW 114
Query: 516 TGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNV 575
+ V ++ P R H V++ + G +G S F E+ +W +
Sbjct: 115 SLVEAKGGSPPACRSFHRMVAVGKDLYVFGGCGTSGRLSDLHRF----DTEQKTWE--QM 168
Query: 576 PGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASK 620
P G ++ + G + V+ G +G+E +N+ H L+S+
Sbjct: 169 PSSDKILGRGGASLLHAGRELFVVAGFSGKE--MNDAHAFDLSSR 211
>gi|421155954|ref|ZP_15615414.1| sensory box protein [Pseudomonas aeruginosa ATCC 14886]
gi|404519642|gb|EKA30373.1| sensory box protein [Pseudomonas aeruginosa ATCC 14886]
Length = 156
Score = 79.3 bits (194), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
VVA+ D +IY N+ FE TGY D++L R+CRFLQ A+R+ P ++ I
Sbjct: 19 VVAEQEGDDSILIYANRAFEHLTGYAVDDILYRDCRFLQ----GAERQQP-----GLAAI 69
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R + G + L NF+KDGTP N L + P+R++ +T+ IGIQ
Sbjct: 70 REAISSGQPCREVLRNFRKDGTPFWNELSITPVRNEADHLTYFIGIQ 116
>gi|429330861|ref|ZP_19211639.1| histidine kinase [Pseudomonas putida CSV86]
gi|428764447|gb|EKX86584.1| histidine kinase [Pseudomonas putida CSV86]
Length = 532
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 12/129 (9%)
Query: 40 ELSLKPGLLFYP---TTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQ 96
++S P +F+ TT +V + D PII+ N+ F TGY +E++GRNCRFLQ
Sbjct: 15 DISGHPKDIFFAAVETTRMPMIVTNPNAADNPIIFANQAFLDMTGYSPEEIVGRNCRFLQ 74
Query: 97 YRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGT 156
P DP VV IR +E +F E+LN++KDG+ N L ++PI ++ G
Sbjct: 75 ---------GPDTDPEVVGAIRGAIEGRYDFSTEILNYRKDGSSFWNALFISPIFNEKGE 125
Query: 157 VTHIIGIQI 165
+ + Q+
Sbjct: 126 LVYFFASQL 134
>gi|388854489|emb|CCF51876.1| related to white collar 1 protein [Ustilago hordei]
Length = 1093
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 7/115 (6%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR----DPRAQRRHPLVDP 111
SF ++DA PD P+IY ++ F TGY E+LG+NCRFLQ + A+R H D
Sbjct: 423 SFAISDARHPDQPLIYASETFCHLTGYTLHEILGKNCRFLQTPGVPLEAGAERLH--TDN 480
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGT-VTHIIGIQI 165
V ++R E Q L+N++KDG+P +N + + P+ D T V ++G Q+
Sbjct: 481 RAVEHLKRHNSGFRECQASLINYRKDGSPFINLVTVVPVSWSDPTQVDFLVGFQV 535
>gi|365765256|gb|EHN06768.1| Kel1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1095
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 346 WRRVSVKSSPPGRWGHTLSSL--NGSWLVVFGGCGRQGLLNDVFVL----DLDAKQPTWI 399
W R+ +++SP R+ H S+ + + + V GG Q + D ++L + T I
Sbjct: 44 WNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGLHDQSVYGDTWILTAFDNATRFSTTTI 103
Query: 400 EVSGGAPPLPRSWHSSCIIEGSKLVVSGGCT----DAGVLLSDTYLLDLTTDKPMWR-EI 454
++S PP PR H++ + G+ VV GG T G++ D YLL++ + K W
Sbjct: 104 DISEATPP-PRVGHAAVLC-GNAFVVFGGDTHKVNKEGLMDDDIYLLNINSYK--WTVPA 159
Query: 455 PTSWSPPSRLGHSLSVYG----RTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQW 507
P P R GH +S+ +TK+ +FGG + + DL + W
Sbjct: 160 PVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTYF----NDLAVYDLSSFRRPDSHW 215
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEE 566
+ L+ FT PPP + +S ++ +FGG ++ GL + +F+ DP+
Sbjct: 216 EFLKPRTFT---------PPPITNFTMISYDS-KLWVFGGDTLQGL--VNDVFMYDPAIN 263
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
W I++ G+ P H+T VV + V+GG + LN ++ L L S++
Sbjct: 264 --DWFIIDTTGEKPPPVQEHAT-VVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRK 315
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 23/195 (11%)
Query: 317 RLVLFGGEGVNMQPMDDTFVLNLDA--------ANPEWRRVSVKS-SPPGRWGHTLSSLN 367
+L +FGG+ DDT+ +L + W + ++ +PP T+ S +
Sbjct: 184 KLYVFGGQ------FDDTYFNDLAVYDLSSFRRPDSHWEFLKPRTFTPPPITNFTMISYD 237
Query: 368 GSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSG 427
S L VFGG QGL+NDVF+ D I+ +G PP P H++ ++ + V G
Sbjct: 238 -SKLWVFGGDTLQGLVNDVFMYDPAINDWFIIDTTGEKPP-PVQEHAT-VVYNDLMCVVG 294
Query: 428 GCTDAGVLLSDTYLLDLTTDKPMWREIP--TSWSPPSRLGHSLSVYGRTKVLMFGGLAKS 485
G + L+ Y L+L + K W ++P T+ P R GHSL++ K+L+ GG K
Sbjct: 295 GKDEHDAYLNSVYFLNLKSRK--WFKLPVFTAGIPQGRSGHSLTLLKNDKILIMGG-DKF 351
Query: 486 GHLRLRSGESYTIDL 500
+ R+ + +T D+
Sbjct: 352 DYARVEEYDLHTSDI 366
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W R P NF+ + ++L +FGG+ + ++D F+ D A +W +
Sbjct: 215 WEFLKPRTFTPPPITNFTMISYDSKLWVFGGDTL-QGLVNDVFM--YDPAINDWFIIDTT 271
Query: 353 -SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
PP H N VV G LN V+ L+L +++ + V P RS
Sbjct: 272 GEKPPPVQEHATVVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRKWFKLPVFTAGIPQGRS 331
Query: 412 WHSSCIIEGSKLVVSGG 428
HS +++ K+++ GG
Sbjct: 332 GHSLTLLKNDKILIMGG 348
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 450 MWREIPTSWSPPSRLGHSLSVY--GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW 507
+W I SP R H S Y + ++ + GGL H + G+++ + D ++
Sbjct: 43 VWNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGL----HDQSVYGDTWILTAFDNATRF 98
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGR-IIIFGGSIAGLHSP----SQLFLLD 562
T S PPPR+ H AV CG ++FGG ++ ++LL+
Sbjct: 99 S-------TTTIDISEATPPPRVGHAAVL--CGNAFVVFGGDTHKVNKEGLMDDDIYLLN 149
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVG----GTRVLVLGGHTGEEWVLNELHELCLA 618
+ K W + G P +GH ++ T++ V GG + + N+L L+
Sbjct: 150 INSYK--WTVPAPVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTY-FNDLAVYDLS 206
Query: 619 S 619
S
Sbjct: 207 S 207
>gi|315498235|ref|YP_004087039.1| pas/pac sensor hybrid histidine kinase [Asticcacaulis excentricus
CB 48]
gi|315416247|gb|ADU12888.1| PAS/PAC sensor hybrid histidine kinase [Asticcacaulis excentricus
CB 48]
Length = 596
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 48 LFYPT---TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR 104
LF+ T +V D PD PI++ N+ F TGY +EV+GRNCRFLQ
Sbjct: 103 LFFAAIEMTRMPMIVTDPNRPDNPIVFANQAFLNTTGYTMEEVMGRNCRFLQGEG----- 157
Query: 105 RHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
DP +++ + R + + + E+ NF+KDGT N L ++PI D DG + + G Q
Sbjct: 158 ----TDPQMIANLSRAIRDRTDIAVEIQNFRKDGTAFWNALFVSPIFDRDGKLLYYFGSQ 213
Query: 165 I 165
+
Sbjct: 214 L 214
>gi|435846163|ref|YP_007308413.1| PAS/PAC sensor hybrid histidine kinase [Natronococcus occultus SP4]
gi|433672431|gb|AGB36623.1| PAS/PAC sensor hybrid histidine kinase [Natronococcus occultus SP4]
Length = 634
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 10/111 (9%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++ D PD PI Y N+ F TGY +E +GRNCRFLQ D AQ +P
Sbjct: 34 PVGILITDPSQPDNPITYANQGFVRLTGYPREEAVGRNCRFLQG-DETAQ------EP-- 84
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V +R ++ G ELLN+++DG P NR+ +AP+ D D +TH +GIQ
Sbjct: 85 VDRMRTAIDAGERVTVELLNYRRDGEPFWNRVTVAPLFDGD-ELTHFVGIQ 134
>gi|349578709|dbj|GAA23874.1| K7_Kel1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1164
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 346 WRRVSVKSSPPGRWGHTLSSL--NGSWLVVFGGCGRQGLLNDVFVL----DLDAKQPTWI 399
W R+ +++SP R+ H S+ + + + V GG Q + D ++L + T I
Sbjct: 113 WNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGLHDQSVYGDTWILTAFDNATRFSTTTI 172
Query: 400 EVSGGAPPLPRSWHSSCIIEGSKLVVSGGCT----DAGVLLSDTYLLDLTTDKPMWR-EI 454
++S PP PR H++ + G+ VV GG T G++ D YLL++ + K W
Sbjct: 173 DISEATPP-PRVGHAAVLC-GNAFVVFGGDTHKVNKEGLMDDDIYLLNINSYK--WTVPA 228
Query: 455 PTSWSPPSRLGHSLSVYG----RTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQW 507
P P R GH +S+ +TK+ +FGG + + DL + W
Sbjct: 229 PVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTYF----NDLAVYDLSSFRRPDSHW 284
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEE 566
+ L+ FT PPP + +S ++ +FGG ++ GL + +F+ DP+
Sbjct: 285 EFLKPRTFT---------PPPITNFTMISYDS-KLWVFGGDTLQGL--VNDVFMYDPAIN 332
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
W I++ G+ P H+T VV + V+GG + LN ++ L L S++
Sbjct: 333 --DWFIIDTTGEKPPPVQEHAT-VVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRK 384
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 317 RLVLFGGEGVNMQPMDDTFVLNLDA--------ANPEWRRVSVKS-SPPGRWGHTLSSLN 367
+L +FGG+ DDT+ +L + W + ++ +PP T+ S +
Sbjct: 253 KLYVFGGQ------FDDTYFNDLAVYDLSSFRRPDSHWEFLKPRTFTPPPITNFTMISYD 306
Query: 368 GSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSG 427
S L VFGG QGL+NDVF+ D I+ +G PP P H++ + VV G
Sbjct: 307 -SKLWVFGGDTLQGLVNDVFMYDPAINDWFIIDTTGEKPP-PVQEHATVVYNDLMCVV-G 363
Query: 428 GCTDAGVLLSDTYLLDLTTDKPMWREIP--TSWSPPSRLGHSLSVYGRTKVLMFGGLAKS 485
G + L+ Y L+L + K W ++P T+ P R GHSL++ K+L+ GG K
Sbjct: 364 GKDEHDAYLNSVYFLNLKSRK--WFKLPVFTAGIPQGRSGHSLTLLKNDKILIMGG-DKF 420
Query: 486 GHLRLRSGESYTIDL 500
+ R+ + +T D+
Sbjct: 421 DYARVEEYDLHTSDI 435
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W R P NF+ + ++L +FGG+ + ++D F+ D A +W +
Sbjct: 284 WEFLKPRTFTPPPITNFTMISYDSKLWVFGGDTL-QGLVNDVFM--YDPAINDWFIIDTT 340
Query: 353 -SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
PP H N VV G LN V+ L+L +++ + V P RS
Sbjct: 341 GEKPPPVQEHATVVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRKWFKLPVFTAGIPQGRS 400
Query: 412 WHSSCIIEGSKLVVSGG 428
HS +++ K+++ GG
Sbjct: 401 GHSLTLLKNDKILIMGG 417
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 450 MWREIPTSWSPPSRLGHSLSVY--GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW 507
+W I SP R H S Y + ++ + GGL H + G+++ + D ++
Sbjct: 112 VWNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGL----HDQSVYGDTWILTAFDNATRF 167
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGR-IIIFGGSIAGLHSP----SQLFLLD 562
T S PPPR+ H AV CG ++FGG ++ ++LL+
Sbjct: 168 S-------TTTIDISEATPPPRVGHAAVL--CGNAFVVFGGDTHKVNKEGLMDDDIYLLN 218
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVG----GTRVLVLGGHTGEEWVLNELHELCLA 618
+ K W + G P +GH ++ T++ V GG + + N+L L+
Sbjct: 219 INSYK--WTVPAPVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTY-FNDLAVYDLS 275
Query: 619 S 619
S
Sbjct: 276 S 276
>gi|162330142|pdb|2V1A|A Chain A, N- And C-Terminal Helices Of Oat Lov2 (404-546) Are
Involved In Light-Induced Signal Transduction (Room
Temperature (293k) Dark Structure Of Lov2 (404-546))
gi|162330143|pdb|2V1B|A Chain A, N- And C-Terminal Helices Of Oat Lov2 (404-546) Are
Involved In Light-Induced Signal Transduction (Room
Temperature (293k) Light Structure Of Lov2 (404-546))
Length = 144
Score = 79.3 bits (194), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 12 NFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQ---------GPETDRATVR 62
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 63 KIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 112
>gi|162330140|pdb|2V0U|A Chain A, N- And C-terminal Helices Of Oat Lov2 (404-546) Are
Involved In Light-induced Signal Transduction (cryo Dark
Structure Of Lov2 (404-546))
gi|162330141|pdb|2V0W|A Chain A, N- And C-Terminal Helices Of Oat Lov2 (404-546) Are
Involved In Light-Induced Signal Transduction (Cryo-
Trapped Light Structure Of Lov2 (404-546))
Length = 146
Score = 79.3 bits (194), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
+FV+ D PD PII+ + F T Y +E+LGRNCRFLQ P D V
Sbjct: 14 NFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQ---------GPETDRATVR 64
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
+IR ++ E +L+N+ K G N L P+RD G V + IG+Q+
Sbjct: 65 KIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQL 114
>gi|415921429|ref|ZP_11554531.1| Sensor protein [Herbaspirillum frisingense GSF30]
gi|407760818|gb|EKF70018.1| Sensor protein [Herbaspirillum frisingense GSF30]
Length = 537
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T +V+D PD PII+VN F TGY +V+G+NCRFLQ P D
Sbjct: 37 TRMPMIVSDPNQPDNPIIFVNNAFINMTGYSRADVIGKNCRFLQ---------GPETDRA 87
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
VV+++R + E E ELLN++K+G+ N L ++P+ D G + + F +++D
Sbjct: 88 VVAQVREAVLERREIATELLNYRKNGSTFWNALFISPVYDQHGELKY------FFSSQLD 141
Query: 173 LNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLTPRD 232
++ + + Q Q+ + + G D +LQ+ L L+ +P
Sbjct: 142 ISR------RRDAEQALGQARKMEALGQLTGGIAHDFNNLLQVISGYLDIINLALRSP-- 193
Query: 233 VASIGSVCRRIRQLTKNEHVRKMVCQN--AWGRE 264
V +G V R + K M+ Q A+ R+
Sbjct: 194 VPDLGRVARSTDSIRKASGKAAMLTQQLLAFARK 227
>gi|6321952|ref|NP_012028.1| Kel1p [Saccharomyces cerevisiae S288c]
gi|731732|sp|P38853.1|KEL1_YEAST RecName: Full=Kelch repeat-containing protein 1
gi|500665|gb|AAB68991.1| Yhr158cp [Saccharomyces cerevisiae]
gi|285810064|tpg|DAA06851.1| TPA: Kel1p [Saccharomyces cerevisiae S288c]
gi|392298969|gb|EIW10064.1| Kel1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1164
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 346 WRRVSVKSSPPGRWGHTLSSL--NGSWLVVFGGCGRQGLLNDVFVL----DLDAKQPTWI 399
W R+ +++SP R+ H S+ + + + V GG Q + D ++L + T I
Sbjct: 113 WNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGLHDQSVYGDTWILTAFDNATRFSTTTI 172
Query: 400 EVSGGAPPLPRSWHSSCIIEGSKLVVSGGCT----DAGVLLSDTYLLDLTTDKPMWR-EI 454
++S PP PR H++ + G+ VV GG T G++ D YLL++ + K W
Sbjct: 173 DISEATPP-PRVGHAAVLC-GNAFVVFGGDTHKVNKEGLMDDDIYLLNINSYK--WTVPA 228
Query: 455 PTSWSPPSRLGHSLSVYG----RTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQW 507
P P R GH +S+ +TK+ +FGG + + DL + W
Sbjct: 229 PVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTYF----NDLAVYDLSSFRRPDSHW 284
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEE 566
+ L+ FT PPP + +S ++ +FGG ++ GL + +F+ DP+
Sbjct: 285 EFLKPRTFT---------PPPITNFTMISYDS-KLWVFGGDTLQGL--VNDVFMYDPAIN 332
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
W I++ G+ P H+T VV + V+GG + LN ++ L L S++
Sbjct: 333 --DWFIIDTTGEKPPPVQEHAT-VVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRK 384
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 317 RLVLFGGEGVNMQPMDDTFVLNLDA--------ANPEWRRVSVKS-SPPGRWGHTLSSLN 367
+L +FGG+ DDT+ +L + W + ++ +PP T+ S +
Sbjct: 253 KLYVFGGQ------FDDTYFNDLAVYDLSSFRRPDSHWEFLKPRTFTPPPITNFTMISYD 306
Query: 368 GSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSG 427
S L VFGG QGL+NDVF+ D I+ +G PP P H++ + VV G
Sbjct: 307 -SKLWVFGGDTLQGLVNDVFMYDPAINDWFIIDTTGEKPP-PVQEHATVVYNDLMCVV-G 363
Query: 428 GCTDAGVLLSDTYLLDLTTDKPMWREIP--TSWSPPSRLGHSLSVYGRTKVLMFGGLAKS 485
G + L+ Y L+L + K W ++P T+ P R GHSL++ K+L+ GG K
Sbjct: 364 GKDEHDAYLNSVYFLNLKSRK--WFKLPVFTAGIPQGRSGHSLTLLKNDKILIMGG-DKF 420
Query: 486 GHLRLRSGESYTIDL 500
+ R+ + +T D+
Sbjct: 421 DYARVEEYDLHTSDI 435
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W R P NF+ + ++L +FGG+ + ++D F+ D A +W +
Sbjct: 284 WEFLKPRTFTPPPITNFTMISYDSKLWVFGGDTL-QGLVNDVFM--YDPAINDWFIIDTT 340
Query: 353 -SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
PP H N VV G LN V+ L+L +++ + V P RS
Sbjct: 341 GEKPPPVQEHATVVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRKWFKLPVFTAGIPQGRS 400
Query: 412 WHSSCIIEGSKLVVSGG 428
HS +++ K+++ GG
Sbjct: 401 GHSLTLLKNDKILIMGG 417
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 450 MWREIPTSWSPPSRLGHSLSVY--GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW 507
+W I SP R H S Y + ++ + GGL H + G+++ + D ++
Sbjct: 112 VWNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGL----HDQSVYGDTWILTAFDNATRF 167
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGR-IIIFGGSIAGLHSP----SQLFLLD 562
T S PPPR+ H AV CG ++FGG ++ ++LL+
Sbjct: 168 S-------TTTIDISEATPPPRVGHAAVL--CGNAFVVFGGDTHKVNKEGLMDDDIYLLN 218
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVG----GTRVLVLGGHTGEEWVLNELHELCLA 618
+ K W + G P +GH ++ T++ V GG + + N+L L+
Sbjct: 219 INSYK--WTVPAPVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTY-FNDLAVYDLS 275
Query: 619 S 619
S
Sbjct: 276 S 276
>gi|323308776|gb|EGA62014.1| Kel1p [Saccharomyces cerevisiae FostersO]
Length = 1164
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 346 WRRVSVKSSPPGRWGHTLSSL--NGSWLVVFGGCGRQGLLNDVFVL----DLDAKQPTWI 399
W R+ +++SP R+ H S+ + + + V GG Q + D ++L + T I
Sbjct: 113 WNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGLHDQSVYGDTWILTAFDNATRFSTTTI 172
Query: 400 EVSGGAPPLPRSWHSSCIIEGSKLVVSGGCT----DAGVLLSDTYLLDLTTDKPMWR-EI 454
++S PP PR H++ + G+ VV GG T G++ D YLL++ + K W
Sbjct: 173 DISEATPP-PRVGHAAVLC-GNAFVVFGGDTHKVNKEGLMDDDIYLLNINSYK--WTVPA 228
Query: 455 PTSWSPPSRLGHSLSVYG----RTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQW 507
P P R GH +S+ +TK+ +FGG + + DL + W
Sbjct: 229 PVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTYF----NDLAVYDLSSFRRPDSHW 284
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEE 566
+ L+ FT PPP + +S ++ +FGG ++ GL + +F+ DP+
Sbjct: 285 EFLKPRTFT---------PPPITNFTMISYDS-KLWVFGGDTLQGL--VNDVFMYDPAIN 332
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
W I++ G+ P H+T VV + V+GG + LN ++ L L S++
Sbjct: 333 --DWFIIDTTGEKPPPVQEHAT-VVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRK 384
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 317 RLVLFGGEGVNMQPMDDTFVLNLDA--------ANPEWRRVSVKS-SPPGRWGHTLSSLN 367
+L +FGG+ DDT+ +L + W + ++ +PP T+ S +
Sbjct: 253 KLYVFGGQ------FDDTYFNDLAVYDLSSFRRPDSHWEFLKPRTFTPPPITNFTMISYD 306
Query: 368 GSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSG 427
S L VFGG QGL+NDVF+ D I+ +G PP P H++ + VV G
Sbjct: 307 -SKLWVFGGDTLQGLVNDVFMYDPAINDWFIIDTTGEKPP-PVQEHATVVYNDLMCVV-G 363
Query: 428 GCTDAGVLLSDTYLLDLTTDKPMWREIP--TSWSPPSRLGHSLSVYGRTKVLMFGGLAKS 485
G + L+ Y L+L + K W ++P T+ P R GHSL++ K+L+ GG K
Sbjct: 364 GKDEHDAYLNSVYFLNLKSRK--WFKLPVFTAGIPQGRSGHSLTLLKNDKILIMGG-DKF 420
Query: 486 GHLRLRSGESYTIDL 500
+ R+ + +T D+
Sbjct: 421 DYARVEEYDLHTSDI 435
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W R P NF+ + ++L +FGG+ + ++D F+ D A +W +
Sbjct: 284 WEFLKPRTFTPPPITNFTMISYDSKLWVFGGDTL-QGLVNDVFM--YDPAINDWFIIDTT 340
Query: 353 -SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
PP H N VV G LN V+ L+L +++ + V P RS
Sbjct: 341 GEKPPPVQEHATVVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRKWFKLPVFTAGIPQGRS 400
Query: 412 WHSSCIIEGSKLVVSGG 428
HS +++ K+++ GG
Sbjct: 401 GHSLTLLKNDKILIMGG 417
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 450 MWREIPTSWSPPSRLGHSLSVY--GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW 507
+W I SP R H S Y + ++ + GGL H + G+++ + D ++
Sbjct: 112 VWNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGL----HDQSVYGDTWILTAFDNATRF 167
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGR-IIIFGGSIAGLHSP----SQLFLLD 562
T S PPPR+ H AV CG ++FGG ++ ++LL+
Sbjct: 168 S-------TTTIDISEATPPPRVGHAAVL--CGNAFVVFGGDTHKVNKEGLMDDDIYLLN 218
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVG----GTRVLVLGGHTGEEWVLNELHELCLA 618
+ K W + G P +GH ++ T++ V GG + + N+L L+
Sbjct: 219 INSYK--WTVPAPVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTY-FNDLAVYDLS 275
Query: 619 S 619
S
Sbjct: 276 S 276
>gi|448460091|ref|ZP_21597011.1| HTR-like protein [Halorubrum lipolyticum DSM 21995]
gi|445807809|gb|EMA57890.1| HTR-like protein [Halorubrum lipolyticum DSM 21995]
Length = 620
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
P + D D P++YVN F TGY ++ +G NCRFLQ D DP
Sbjct: 267 APVGITITDPDLSDNPMVYVNDRFVEVTGYDREDAVGVNCRFLQGED---------TDPE 317
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V+ +R ++ ELLN++KDGTP NR+ +APIR DG+V+ +G Q
Sbjct: 318 PVARLREAIDAEEPESVELLNYRKDGTPFWNRVSVAPIRAGDGSVSEWVGFQ 369
>gi|256273985|gb|EEU08903.1| Kel1p [Saccharomyces cerevisiae JAY291]
Length = 1164
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 346 WRRVSVKSSPPGRWGHTLSSL--NGSWLVVFGGCGRQGLLNDVFVL----DLDAKQPTWI 399
W R+ +++SP R+ H S+ + + + V GG Q + D ++L + T I
Sbjct: 113 WNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGLHDQSVYGDTWILTAFDNATRFSTTTI 172
Query: 400 EVSGGAPPLPRSWHSSCIIEGSKLVVSGGCT----DAGVLLSDTYLLDLTTDKPMWR-EI 454
++S PP PR H++ + G+ VV GG T G++ D YLL++ + K W
Sbjct: 173 DISEATPP-PRVGHAAVLC-GNAFVVFGGDTHKVNKEGLMDDDIYLLNINSYK--WTVPA 228
Query: 455 PTSWSPPSRLGHSLSVYG----RTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQW 507
P P R GH +S+ +TK+ +FGG + + DL + W
Sbjct: 229 PVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTYF----NDLAVYDLSSFRRPDSHW 284
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEE 566
+ L+ FT PPP + +S ++ +FGG ++ GL + +F+ DP+
Sbjct: 285 EFLKPRTFT---------PPPITNFTMISYDS-KLWVFGGDTLQGL--VNDVFMYDPAIN 332
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
W I++ G+ P H+T VV + V+GG + LN ++ L L S++
Sbjct: 333 --DWFIIDTTGEKPPPVQEHAT-VVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRK 384
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 317 RLVLFGGEGVNMQPMDDTFVLNLDA--------ANPEWRRVSVKS-SPPGRWGHTLSSLN 367
+L +FGG+ DDT+ +L + W + ++ +PP T+ S +
Sbjct: 253 KLYVFGGQ------FDDTYFNDLAVYDLSSFRRPDSHWEFLKPRTFTPPPITNFTMISYD 306
Query: 368 GSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSG 427
S L VFGG QGL+NDVF+ D I+ +G PP P H++ + VV G
Sbjct: 307 -SKLWVFGGDTLQGLVNDVFMYDPAINDWFIIDTTGEKPP-PVQEHATVVYNDLMCVV-G 363
Query: 428 GCTDAGVLLSDTYLLDLTTDKPMWREIP--TSWSPPSRLGHSLSVYGRTKVLMFGGLAKS 485
G + L+ Y L+L + K W ++P T+ P R GHSL++ K+L+ GG K
Sbjct: 364 GKDEHDAYLNSVYFLNLKSRK--WFKLPVFTAGIPQGRSGHSLTLLKNDKILIMGG-DKF 420
Query: 486 GHLRLRSGESYTIDL 500
+ R+ + +T D+
Sbjct: 421 DYARVEEYDLHTSDI 435
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W R P NF+ + ++L +FGG+ + ++D F+ D A +W +
Sbjct: 284 WEFLKPRTFTPPPITNFTMISYDSKLWVFGGDTL-QGLVNDVFM--YDPAINDWFIIDTT 340
Query: 353 -SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
PP H N VV G LN V+ L+L +++ + V P RS
Sbjct: 341 GEKPPPVQEHATVVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRKWFKLPVFTAGIPQGRS 400
Query: 412 WHSSCIIEGSKLVVSGG 428
HS +++ K+++ GG
Sbjct: 401 GHSLTLLKNDKILIMGG 417
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 450 MWREIPTSWSPPSRLGHSLSVY--GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW 507
+W I SP R H S Y + ++ + GGL H + G+++ + D ++
Sbjct: 112 VWNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGL----HDQSVYGDTWILTAFDNATRF 167
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGR-IIIFGGSIAGLHSP----SQLFLLD 562
T S PPPR+ H AV CG ++FGG ++ ++LL+
Sbjct: 168 S-------TTTIDISEATPPPRVGHAAVL--CGNAFVVFGGDTHKVNKEGLMDDDIYLLN 218
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVG----GTRVLVLGGHTGEEWVLNELHELCLA 618
+ K W + G P +GH ++ T++ V GG + + N+L L+
Sbjct: 219 INSYK--WTVPAPVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTY-FNDLAVYDLS 275
Query: 619 S 619
S
Sbjct: 276 S 276
>gi|190405936|gb|EDV09203.1| kelch repeat-containing protein 1 [Saccharomyces cerevisiae
RM11-1a]
Length = 1163
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 346 WRRVSVKSSPPGRWGHTLSSL--NGSWLVVFGGCGRQGLLNDVFVL----DLDAKQPTWI 399
W R+ +++SP R+ H S+ + + + V GG Q + D ++L + T I
Sbjct: 113 WNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGLHDQSVYGDTWILTAFDNATRFSTTTI 172
Query: 400 EVSGGAPPLPRSWHSSCIIEGSKLVVSGGCT----DAGVLLSDTYLLDLTTDKPMWR-EI 454
++S PP PR H++ + G+ VV GG T G++ D YLL++ + K W
Sbjct: 173 DISEATPP-PRVGHAAVLC-GNAFVVFGGDTHKVNKEGLMDDDIYLLNINSYK--WTVPA 228
Query: 455 PTSWSPPSRLGHSLSVYG----RTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQW 507
P P R GH +S+ +TK+ +FGG + + DL + W
Sbjct: 229 PVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTYF----NDLAVYDLSSFRRPDSHW 284
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEE 566
+ L+ FT PPP + +S ++ +FGG ++ GL + +F+ DP+
Sbjct: 285 EFLKPRTFT---------PPPITNFTMISYDS-KLWVFGGDTLQGL--VNDVFMYDPAIN 332
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
W I++ G+ P H+T VV + V+GG + LN ++ L L S++
Sbjct: 333 --DWFIIDTTGEKPPPVQEHAT-VVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRK 384
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 317 RLVLFGGEGVNMQPMDDTFVLNLDA--------ANPEWRRVSVKS-SPPGRWGHTLSSLN 367
+L +FGG+ DDT+ +L + W + ++ +PP T+ S +
Sbjct: 253 KLYVFGGQ------FDDTYFNDLAVYDLSSFRRPDSHWEFLKPRTFTPPPITNFTMISYD 306
Query: 368 GSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSG 427
S L VFGG QGL+NDVF+ D I+ +G PP P H++ + VV G
Sbjct: 307 -SKLWVFGGDTLQGLVNDVFMYDPAINDWFIIDTTGEKPP-PVQEHATVVYNDLMCVV-G 363
Query: 428 GCTDAGVLLSDTYLLDLTTDKPMWREIP--TSWSPPSRLGHSLSVYGRTKVLMFGGLAKS 485
G + L+ Y L+L + K W ++P T+ P R GHSL++ K+L+ GG K
Sbjct: 364 GKDEHDAYLNSVYFLNLKSRK--WFKLPVFTAGIPQGRSGHSLTLLKNDKILIMGG-DKF 420
Query: 486 GHLRLRSGESYTIDL 500
+ R+ + +T D+
Sbjct: 421 DYARVEEYDLHTSDI 435
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W R P NF+ + ++L +FGG+ + ++D F+ D A +W +
Sbjct: 284 WEFLKPRTFTPPPITNFTMISYDSKLWVFGGDTL-QGLVNDVFM--YDPAINDWFIIDTT 340
Query: 353 -SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
PP H N VV G LN V+ L+L +++ + V P RS
Sbjct: 341 GEKPPPVQEHATVVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRKWFKLPVFTAGIPQGRS 400
Query: 412 WHSSCIIEGSKLVVSGG 428
HS +++ K+++ GG
Sbjct: 401 GHSLTLLKNDKILIMGG 417
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 450 MWREIPTSWSPPSRLGHSLSVY--GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW 507
+W I SP R H S Y + ++ + GGL H + G+++ + D ++
Sbjct: 112 VWNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGL----HDQSVYGDTWILTAFDNATRF 167
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGR-IIIFGGSIAGLHSP----SQLFLLD 562
T S PPPR+ H AV CG ++FGG ++ ++LL+
Sbjct: 168 S-------TTTIDISEATPPPRVGHAAVL--CGNAFVVFGGDTHKVNKEGLMDDDIYLLN 218
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVG----GTRVLVLGGHTGEEWVLNELHELCLA 618
+ K W + G P +GH ++ T++ V GG + + N+L L+
Sbjct: 219 INSYK--WTVPAPVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTY-FNDLAVYDLS 275
Query: 619 S 619
S
Sbjct: 276 S 276
>gi|151944104|gb|EDN62397.1| conserved protein [Saccharomyces cerevisiae YJM789]
Length = 1164
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 346 WRRVSVKSSPPGRWGHTLSSL--NGSWLVVFGGCGRQGLLNDVFVL----DLDAKQPTWI 399
W R+ +++SP R+ H S+ + + + V GG Q + D ++L + T I
Sbjct: 113 WNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGLHDQSVYGDTWILTAFDNATRFSTTTI 172
Query: 400 EVSGGAPPLPRSWHSSCIIEGSKLVVSGGCT----DAGVLLSDTYLLDLTTDKPMWR-EI 454
++S PP PR H++ + G+ VV GG T G++ D YLL++ + K W
Sbjct: 173 DISEATPP-PRVGHAAVLC-GNAFVVFGGDTHKVNKEGLMDDDIYLLNINSYK--WTVPA 228
Query: 455 PTSWSPPSRLGHSLSVYG----RTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQW 507
P P R GH +S+ +TK+ +FGG + + DL + W
Sbjct: 229 PVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTYF----NDLAVYDLSSFRRPDSHW 284
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEE 566
+ L+ FT PPP + +S ++ +FGG ++ GL + +F+ DP+
Sbjct: 285 EFLKPRTFT---------PPPITNFTMISYDS-KLWVFGGDTLQGL--VNDVFMYDPAIN 332
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
W I++ G+ P H+T VV + V+GG + LN ++ L L S++
Sbjct: 333 --DWFIIDTTGEKPPPVQEHAT-VVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRK 384
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 23/195 (11%)
Query: 317 RLVLFGGEGVNMQPMDDTFVLNLDA--------ANPEWRRVSVKS-SPPGRWGHTLSSLN 367
+L +FGG+ DDT+ +L + W + ++ +PP T+ S +
Sbjct: 253 KLYVFGGQ------FDDTYFNDLAVYDLSSFRRPDSHWEFLKPRTFTPPPITNFTMISYD 306
Query: 368 GSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSG 427
S L VFGG QGL+NDVF+ D I+ +G PP P H++ ++ + V G
Sbjct: 307 -SKLWVFGGDTLQGLVNDVFMYDPAINDWFIIDTTGEKPP-PVQEHAT-VVYNDLMCVVG 363
Query: 428 GCTDAGVLLSDTYLLDLTTDKPMWREIP--TSWSPPSRLGHSLSVYGRTKVLMFGGLAKS 485
G + L+ Y L+L + K W ++P T+ P R GHSL++ K+L+ GG K
Sbjct: 364 GKDEHDAYLNSVYFLNLKSRK--WFKLPVFTAGIPQGRSGHSLTLLKNDKILIMGG-DKF 420
Query: 486 GHLRLRSGESYTIDL 500
+ R+ + +T D+
Sbjct: 421 DYARVEEYDLHTSDI 435
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W R P NF+ + ++L +FGG+ + ++D F+ D A +W +
Sbjct: 284 WEFLKPRTFTPPPITNFTMISYDSKLWVFGGDTL-QGLVNDVFM--YDPAINDWFIIDTT 340
Query: 353 -SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
PP H N VV G LN V+ L+L +++ + V P RS
Sbjct: 341 GEKPPPVQEHATVVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRKWFKLPVFTAGIPQGRS 400
Query: 412 WHSSCIIEGSKLVVSGG 428
HS +++ K+++ GG
Sbjct: 401 GHSLTLLKNDKILIMGG 417
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 450 MWREIPTSWSPPSRLGHSLSVY--GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW 507
+W I SP R H S Y + ++ + GGL H + G+++ + D ++
Sbjct: 112 VWNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGL----HDQSVYGDTWILTAFDNATRF 167
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGR-IIIFGGSIAGLHSP----SQLFLLD 562
T S PPPR+ H AV CG ++FGG ++ ++LL+
Sbjct: 168 S-------TTTIDISEATPPPRVGHAAVL--CGNAFVVFGGDTHKVNKEGLMDDDIYLLN 218
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVG----GTRVLVLGGHTGEEWVLNELHELCLA 618
+ K W + G P +GH ++ T++ V GG + + N+L L+
Sbjct: 219 INSYK--WTVPAPVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTY-FNDLAVYDLS 275
Query: 619 S 619
S
Sbjct: 276 S 276
>gi|401404163|ref|XP_003881662.1| hypothetical protein NCLIV_014230 [Neospora caninum Liverpool]
gi|325116075|emb|CBZ51629.1| hypothetical protein NCLIV_014230 [Neospora caninum Liverpool]
Length = 646
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 139/333 (41%), Gaps = 71/333 (21%)
Query: 341 AANPE---WRRVSVKSSPPG-RWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQP 396
AA+P W R S ++ PG R H+ + G+ + +FGG + LND+++LD+ + +
Sbjct: 105 AASPSPHFWSRPSTSANAPGPRAAHSCDVI-GTKMFIFGGWNGKFALNDLYILDVQSLRW 163
Query: 397 TWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPT 456
T +E A P R+ H++ + G ++ V GG D L+D ++LD TT M R
Sbjct: 164 TRVEQDASALPEARNNHTTTAV-GDRIFVHGG-HDGAQWLADLHVLD-TTPAHMGRHRGL 220
Query: 457 SWSPP--------SRLGHSLSVYGRTKVLMFGGL-------------------------- 482
SWS P +R HSL+ K+ MFGG
Sbjct: 221 SWSSPPVSGRRPSARACHSLTRVNE-KLYMFGGYDGANCFQDIDILDLDTMAWIQPAVSG 279
Query: 483 ----AKSGH--------LRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPPPRL 530
A++ H L L G S L D + T + + PPP L
Sbjct: 280 EKPQARNAHTMTVVDRKLVLFGGHSGNTHLTD----LHVFDTATLTWTKPEISGTPPPGL 335
Query: 531 DHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ--------PPKF 582
++ +I +FGG G +++++LD +W +++ PP
Sbjct: 336 RGHTANLIGHKIFLFGG-YDGKRRTNEIYILDTKAR--AWLMISNAASSSVCDKNAPPSG 392
Query: 583 AWGHSTCVVGGTRVLVLGGHTGEEWVLNELHEL 615
HS +VG ++ V GG G +W LN+LH L
Sbjct: 393 RQRHSAALVGNRKLFVFGGFDGNKW-LNDLHVL 424
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 17/172 (9%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ L+ + W + V G +R + +LVLFGG N D + D A
Sbjct: 263 DILDLDTMAWIQPAVSGEKPQARNAHTMTVVDRKLVLFGGHSGNTHLTD---LHVFDTAT 319
Query: 344 PEWRRVSVKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS 402
W + + +PP G GHT ++L G + +FGG + N++++LD A+ W+ +S
Sbjct: 320 LTWTKPEISGTPPPGLRGHT-ANLIGHKIFLFGGYDGKRRTNEIYILDTKAR--AWLMIS 376
Query: 403 GG---------APPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLT 445
APP R HS+ ++ KL V GG D L+D ++LD +
Sbjct: 377 NAASSSVCDKNAPPSGRQRHSAALVGNRKLFVFGGF-DGNKWLNDLHVLDAS 427
>gi|259146915|emb|CAY80171.1| Kel1p [Saccharomyces cerevisiae EC1118]
gi|323348312|gb|EGA82561.1| Kel1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 1164
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 346 WRRVSVKSSPPGRWGHTLSSL--NGSWLVVFGGCGRQGLLNDVFVL----DLDAKQPTWI 399
W R+ +++SP R+ H S+ + + + V GG Q + D ++L + T I
Sbjct: 113 WNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGLHDQSVYGDTWILTAFDNATRFSTTTI 172
Query: 400 EVSGGAPPLPRSWHSSCIIEGSKLVVSGGCT----DAGVLLSDTYLLDLTTDKPMWR-EI 454
++S PP PR H++ + G+ VV GG T G++ D YLL++ + K W
Sbjct: 173 DISEATPP-PRVGHAAVLC-GNAFVVFGGDTHKVNKEGLMDDDIYLLNINSYK--WTVPA 228
Query: 455 PTSWSPPSRLGHSLSVYG----RTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQW 507
P P R GH +S+ +TK+ +FGG + + DL + W
Sbjct: 229 PVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTYF----NDLAVYDLSSFRRPDSHW 284
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEE 566
+ L+ FT PPP + +S ++ +FGG ++ GL + +F+ DP+
Sbjct: 285 EFLKPRTFT---------PPPITNFTMISYDS-KLWVFGGDTLQGL--VNDVFMYDPAIN 332
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
W I++ G+ P H+T VV + V+GG + LN ++ L L S++
Sbjct: 333 --DWFIIDTTGEKPPPVQEHAT-VVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRK 384
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 317 RLVLFGGEGVNMQPMDDTFVLNLDA--------ANPEWRRVSVKS-SPPGRWGHTLSSLN 367
+L +FGG+ DDT+ +L + W + ++ +PP T+ S +
Sbjct: 253 KLYVFGGQ------FDDTYFNDLAVYDLSSFRRPDSHWEFLKPRTFTPPPITNFTMISYD 306
Query: 368 GSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSG 427
S L VFGG QGL+NDVF+ D I+ +G PP P H++ + VV G
Sbjct: 307 -SKLWVFGGDTLQGLVNDVFMYDPAINDWFIIDTTGEKPP-PVQEHATVVYNDLMCVV-G 363
Query: 428 GCTDAGVLLSDTYLLDLTTDKPMWREIP--TSWSPPSRLGHSLSVYGRTKVLMFGGLAKS 485
G + L+ Y L+L + K W ++P T+ P R GHSL++ K+L+ GG K
Sbjct: 364 GKDEHDAYLNSVYFLNLKSRK--WFKLPVFTAGIPQGRSGHSLTLLKNDKILIMGG-DKF 420
Query: 486 GHLRLRSGESYTIDL 500
+ R+ + +T D+
Sbjct: 421 DYARVEEYDLHTSDI 435
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W R P NF+ + ++L +FGG+ + ++D F+ D A +W +
Sbjct: 284 WEFLKPRTFTPPPITNFTMISYDSKLWVFGGDTL-QGLVNDVFM--YDPAINDWFIIDTT 340
Query: 353 -SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
PP H N VV G LN V+ L+L +++ + V P RS
Sbjct: 341 GEKPPPVQEHATVVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRKWFKLPVFTAGIPQGRS 400
Query: 412 WHSSCIIEGSKLVVSGG 428
HS +++ K+++ GG
Sbjct: 401 GHSLTLLKNDKILIMGG 417
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 450 MWREIPTSWSPPSRLGHSLSVY--GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW 507
+W I SP R H S Y + ++ + GGL H + G+++ + D ++
Sbjct: 112 VWNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGL----HDQSVYGDTWILTAFDNATRF 167
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGR-IIIFGGSIAGLHSP----SQLFLLD 562
T S PPPR+ H AV CG ++FGG ++ ++LL+
Sbjct: 168 S-------TTTIDISEATPPPRVGHAAVL--CGNAFVVFGGDTHKVNKEGLMDDDIYLLN 218
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVG----GTRVLVLGGHTGEEWVLNELHELCLA 618
+ K W + G P +GH ++ T++ V GG + + N+L L+
Sbjct: 219 INSYK--WTVPAPVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTY-FNDLAVYDLS 275
Query: 619 S 619
S
Sbjct: 276 S 276
>gi|302885876|ref|XP_003041829.1| hypothetical protein NECHADRAFT_19448 [Nectria haematococca mpVI
77-13-4]
gi|256722735|gb|EEU36116.1| hypothetical protein NECHADRAFT_19448 [Nectria haematococca mpVI
77-13-4]
Length = 158
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD---PRAQRRHPLVDPV 112
SFVV D D PI+Y + +F+ TGY EV+G+NCRFLQ D Q+RH VD
Sbjct: 28 SFVVCDVTLEDCPIVYASAMFQNLTGYSRREVVGKNCRFLQAPDGFVQAGQQRH-YVDNE 86
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V +++ LE E Q L+N++K G P +N L L P+ D + +G QI
Sbjct: 87 AVLRLKKGLEAKDEVQQSLINYRKGGKPFLNLLTLIPVPWDGEEIRFCVGFQI 139
>gi|297624984|ref|YP_003706418.1| PAS/PAC sensor signal transduction histidine kinase [Truepera
radiovictrix DSM 17093]
gi|297166164|gb|ADI15875.1| PAS/PAC sensor signal transduction histidine kinase [Truepera
radiovictrix DSM 17093]
Length = 465
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
++ D PD PIIYVN+ FE TGY DEVLGRNCRFLQ RD D + +
Sbjct: 22 LITDPRLPDNPIIYVNRGFERLTGYARDEVLGRNCRFLQGRD---------TDQAALPAL 72
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R + G + EL N++KDG N L + PI G++ + +G+Q
Sbjct: 73 RAAIARGQGIRVELRNYRKDGAMFWNELHITPIW-RAGSLVYFLGVQ 118
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 9/96 (9%)
Query: 69 IIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQ 128
I+YVN+ F TGY +EVLG+ R Q PR R V++ +RR L G FQ
Sbjct: 159 ILYVNRAFSAMTGYAPEEVLGKTPRMFQ--GPRTSR-------AVLNRMRRRLGRGGVFQ 209
Query: 129 GELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
GE +N++KDG+P + +APIRD G++TH + Q
Sbjct: 210 GETINYRKDGSPFILAWHVAPIRDALGSITHWVSTQ 245
>gi|51013057|gb|AAT92822.1| YHR158C [Saccharomyces cerevisiae]
Length = 1164
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 346 WRRVSVKSSPPGRWGHTLSSL--NGSWLVVFGGCGRQGLLNDVFVL----DLDAKQPTWI 399
W R+ +++SP R+ H S+ + + + V GG Q + D ++L + T I
Sbjct: 113 WNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGLHDQSVYGDTWILTAFDNATRFSTTTI 172
Query: 400 EVSGGAPPLPRSWHSSCIIEGSKLVVSGGCT----DAGVLLSDTYLLDLTTDKPMWR-EI 454
++S PP PR H++ + G+ VV GG T G++ D YLL++ + K W
Sbjct: 173 DISEATPP-PRVGHAAVLC-GNAFVVFGGDTHKVNKEGLMDDDIYLLNINSYK--WTVPA 228
Query: 455 PTSWSPPSRLGHSLSVYG----RTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQW 507
P P R GH +S+ +TK+ +FGG + + DL + W
Sbjct: 229 PVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTYF----NDLAVYDLSSFRRPDSHW 284
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEE 566
+ L+ FT PPP + +S ++ +FGG ++ GL + +F+ DP+
Sbjct: 285 EFLKPRTFT---------PPPITNFTMISYDS-KLWVFGGDTLQGL--VNDVFMYDPAIN 332
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
W I++ G+ P H+T VV + V+GG + LN ++ L L S++
Sbjct: 333 --DWFIIDTTGEKPPPVQEHAT-VVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRK 384
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 317 RLVLFGGEGVNMQPMDDTFVLNLDA--------ANPEWRRVSVKS-SPPGRWGHTLSSLN 367
+L +FGG+ DDT+ +L + W + ++ +PP T+ S +
Sbjct: 253 KLYVFGGQ------FDDTYFNDLAVYDLSSFRRPDSHWEFLKPRTFTPPPITNFTMISYD 306
Query: 368 GSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSG 427
S L VFGG QGL+NDVF+ D I+ +G PP P H++ + VV G
Sbjct: 307 -SKLWVFGGDTLQGLVNDVFMYDPAINDWFIIDTTGEKPP-PVQEHATVVYNDLMCVV-G 363
Query: 428 GCTDAGVLLSDTYLLDLTTDKPMWREIP--TSWSPPSRLGHSLSVYGRTKVLMFGGLAKS 485
G + L+ Y L+L + K W ++P T+ P R GHSL++ K+L+ GG K
Sbjct: 364 GKDEHDAYLNSVYFLNLKSRK--WFKLPVFTAGIPQGRSGHSLTLLKNDKILIMGG-DKF 420
Query: 486 GHLRLRSGESYTIDL 500
+ R+ + +T D+
Sbjct: 421 DYARVEEYDLHTSDI 435
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W R P NF+ + ++L +FGG+ + ++D F+ D A +W +
Sbjct: 284 WEFLKPRTFTPPPITNFTMISYDSKLWVFGGDTL-QGLVNDVFM--YDPAINDWFIIDTT 340
Query: 353 -SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
PP H N VV G LN V+ L+L +++ + V P RS
Sbjct: 341 GEKPPPVQEHATVVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRKWFKLPVFTAGIPQGRS 400
Query: 412 WHSSCIIEGSKLVVSGG 428
HS +++ K+++ GG
Sbjct: 401 GHSLTLLKNDKILIMGG 417
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 450 MWREIPTSWSPPSRLGHSLSVY--GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW 507
+W I SP R H S Y + ++ + GGL H + G+++ + D ++
Sbjct: 112 VWNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGL----HDQSVYGDTWILTAFDNATRF 167
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGR-IIIFGGSIAGLHSP----SQLFLLD 562
T S PPPR+ H AV CG ++FGG ++ ++LL+
Sbjct: 168 S-------TTTIDISEATPPPRVGHAAVL--CGNAFVVFGGDTHKVNKEGLMDDDIYLLN 218
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVG----GTRVLVLGGHTGEEWVLNELHELCLA 618
+ K W + G P +GH ++ T++ V GG + + N+L L+
Sbjct: 219 INSYK--WTVPAPVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTY-FNDLAVYDLS 275
Query: 619 S 619
S
Sbjct: 276 S 276
>gi|335346402|gb|AEH41590.1| putative blue-light photoreceptor [Cercospora zeae-maydis]
Length = 1101
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRD----PRAQRRHPLVDP 111
+FVV DA DFPI+Y ++ FE TGY +LGRNCRFLQ D P +R++ VD
Sbjct: 436 AFVVCDAEKDDFPIVYCSENFERLTGYTKHMILGRNCRFLQSPDGNVAPGIRRKY--VDD 493
Query: 112 VVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++ + E Q L+N+++ G P +N L + PI D V +G Q+
Sbjct: 494 DSVLYLKNMINLRREAQISLVNYRRGGQPFMNLLTMIPISWDSDQVKFFVGFQV 547
>gi|56751332|ref|YP_172033.1| hypothetical protein syc1323_c [Synechococcus elongatus PCC 6301]
gi|81298999|ref|YP_399207.1| diguanylate cyclase/phosphodiesterase [Synechococcus elongatus PCC
7942]
gi|56686291|dbj|BAD79513.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81167880|gb|ABB56220.1| diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with
PAS/PAC sensor(s) [Synechococcus elongatus PCC 7942]
Length = 578
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 58 VVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEI 117
+ADA PD + YVN F+ TGY A E LG++CRFLQ D RAQ P + + +
Sbjct: 39 AIADATHPDLILTYVNSAFKKLTGYNAAEALGKSCRFLQGSD-RAQ-------PGITT-L 89
Query: 118 RRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
R+ + G + L N++KDG+ N+L +API D G V+H + +Q
Sbjct: 90 RQAIRNGQACEVVLRNYRKDGSLFWNQLTIAPITDGQGKVSHYVALQ 136
>gi|323337353|gb|EGA78606.1| Kel1p [Saccharomyces cerevisiae Vin13]
Length = 1104
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 346 WRRVSVKSSPPGRWGHTLSSL--NGSWLVVFGGCGRQGLLNDVFVL----DLDAKQPTWI 399
W R+ +++SP R+ H S+ + + + V GG Q + D ++L + T I
Sbjct: 113 WNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGLHDQSVYGDTWILTAFDNATRFSTTTI 172
Query: 400 EVSGGAPPLPRSWHSSCIIEGSKLVVSGGCT----DAGVLLSDTYLLDLTTDKPMWR-EI 454
++S PP PR H++ + G+ VV GG T G++ D YLL++ + K W
Sbjct: 173 DISEATPP-PRVGHAAVLC-GNAFVVFGGDTHKVNKEGLMDDDIYLLNINSYK--WTVPA 228
Query: 455 PTSWSPPSRLGHSLSVYG----RTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQW 507
P P R GH +S+ +TK+ +FGG + + DL + W
Sbjct: 229 PVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTYF----NDLAVYDLSSFRRPDSHW 284
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEE 566
+ L+ FT PPP + +S ++ +FGG ++ GL + +F+ DP+
Sbjct: 285 EFLKPRTFT---------PPPITNFTMISYDS-KLWVFGGDTLQGL--VNDVFMYDPAIN 332
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
W I++ G+ P H+T VV + V+GG + LN ++ L L S++
Sbjct: 333 --DWFIIDTTGEKPPPVQEHAT-VVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRK 384
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 317 RLVLFGGEGVNMQPMDDTFVLNLDA--------ANPEWRRVSVKS-SPPGRWGHTLSSLN 367
+L +FGG+ DDT+ +L + W + ++ +PP T+ S +
Sbjct: 253 KLYVFGGQ------FDDTYFNDLAVYDLSSFRRPDSHWEFLKPRTFTPPPITNFTMISYD 306
Query: 368 GSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSG 427
S L VFGG QGL+NDVF+ D I+ +G PP P H++ + VV G
Sbjct: 307 -SKLWVFGGDTLQGLVNDVFMYDPAINDWFIIDTTGEKPP-PVQEHATVVYNDLMCVV-G 363
Query: 428 GCTDAGVLLSDTYLLDLTTDKPMWREIP--TSWSPPSRLGHSLSVYGRTKVLMFGGLAKS 485
G + L+ Y L+L + K W ++P T+ P R GHSL++ K+L+ GG K
Sbjct: 364 GKDEHDAYLNSVYFLNLKSRK--WFKLPVFTAGIPQGRSGHSLTLLKNDKILIMGG-DKF 420
Query: 486 GHLRLRSGESYTIDL 500
+ R+ + +T D+
Sbjct: 421 DYARVEEYDLHTSDI 435
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVK 352
W R P NF+ + ++L +FGG+ + ++D F+ D A +W +
Sbjct: 284 WEFLKPRTFTPPPITNFTMISYDSKLWVFGGDTL-QGLVNDVFM--YDPAINDWFIIDTT 340
Query: 353 -SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRS 411
PP H N VV G LN V+ L+L +++ + V P RS
Sbjct: 341 GEKPPPVQEHATVVYNDLMCVVGGKDEHDAYLNSVYFLNLKSRKWFKLPVFTAGIPQGRS 400
Query: 412 WHSSCIIEGSKLVVSGG 428
HS +++ K+++ GG
Sbjct: 401 GHSLTLLKNDKILIMGG 417
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 450 MWREIPTSWSPPSRLGHSLSVY--GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW 507
+W I SP R H S Y + ++ + GGL H + G+++ + D ++
Sbjct: 112 VWNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGL----HDQSVYGDTWILTAFDNATRF 167
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGR-IIIFGGSIAGLHSP----SQLFLLD 562
T S PPPR+ H AV CG ++FGG ++ ++LL+
Sbjct: 168 S-------TTTIDISEATPPPRVGHAAVL--CGNAFVVFGGDTHKVNKEGLMDDDIYLLN 218
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVG----GTRVLVLGGHTGEEWVLNELHELCLA 618
+ K W + G P +GH ++ T++ V GG + + N+L L+
Sbjct: 219 INSYK--WTVPAPVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTY-FNDLAVYDLS 275
Query: 619 S 619
S
Sbjct: 276 S 276
>gi|413947979|gb|AFW80628.1| hypothetical protein ZEAMMB73_821757 [Zea mays]
Length = 569
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 119/285 (41%), Gaps = 28/285 (9%)
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVS 350
+ W G +R + A G+R+++FGG + +++ VL+L EW R
Sbjct: 1 MAWSALATTGQRPGTRDSHGAALVGHRMLVFGGTNGGKK-VNELHVLDLRTR--EWSRPQ 57
Query: 351 VKSSPPG-RWGHTLSSLNGSWLVVFGGC--GRQGLLNDVFVLDLDAKQPTWIEVSGGAPP 407
+ + P R H+++ + G LVVFGG G L+DV VLD+ + E G P
Sbjct: 58 CRGAAPSPRESHSVTVVGGDRLVVFGGSGEGEGNYLSDVHVLDVPTMTWSTPEAIRGGAP 117
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS-WSPPSRLGH 466
PR HS+ + V G C D +LD+ D W P SP R GH
Sbjct: 118 APRDSHSAVAVGARLFVFGGDCGDR--YHGGVDVLDV--DTMAWSRFPVKGASPGVRAGH 173
Query: 467 SLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVP 526
+ G +K+ + GG+ + + + +D+ + W QLE S P
Sbjct: 174 AALSVG-SKIYIIGGVGDKQYY----SDVWVLDVANRS--WSQLEV---------SGQRP 217
Query: 527 PPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWR 571
R H AV M I I+GG ++L +L E P+ R
Sbjct: 218 QGRFSHTAVVM-NNDIAIYGGCGEDERPLNELLILQLGSEHPNGR 261
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 125/280 (44%), Gaps = 29/280 (10%)
Query: 346 WRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGA 405
W ++ PG ++L G ++VFGG +N++ VLDL ++ + + G A
Sbjct: 3 WSALATTGQRPGTRDSHGAALVGHRMLVFGGTNGGKKVNELHVLDLRTREWSRPQCRGAA 62
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDA-GVLLSDTYLLDLTTDKPMWREIPTSWSPPSRL 464
P PR HS ++ G +LVV GG + G LSD ++LD+ T E +P R
Sbjct: 63 PS-PRESHSVTVVGGDRLVVFGGSGEGEGNYLSDVHVLDVPTMTWSTPEAIRGGAPAPRD 121
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYT--IDLGD-EEPQWKQLECNAFTGVGSQ 521
HS G ++ +FGG G+ Y +D+ D + W + +
Sbjct: 122 SHSAVAVG-ARLFVFGG---------DCGDRYHGGVDVLDVDTMAWSRFPVKGAS----- 166
Query: 522 SAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPK 581
P R H A+S+ +I I GG + S +++LD + SW L V GQ P+
Sbjct: 167 ----PGVRAGHAALSV-GSKIYIIGG-VGDKQYYSDVWVLDVANR--SWSQLEVSGQRPQ 218
Query: 582 FAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
+ H T VV + + GG +E LNEL L L S+
Sbjct: 219 GRFSH-TAVVMNNDIAIYGGCGEDERPLNELLILQLGSEH 257
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 284 ELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
++ ++ + W +F V+GA R +A + G+++ + GG G + Q D +V LD AN
Sbjct: 148 DVLDVDTMAWSRFPVKGASPGVRAGHAALSVGSKIYIIGGVG-DKQYYSDVWV--LDVAN 204
Query: 344 PEWRRVSVKSS-PPGRWGHTLSSLNGSWLVVFGGCGR-QGLLNDVFVLDLDAKQPT 397
W ++ V P GR+ HT +N + ++GGCG + LN++ +L L ++ P
Sbjct: 205 RSWSQLEVSGQRPQGRFSHTAVVMNND-IAIYGGCGEDERPLNELLILQLGSEHPN 259
>gi|254410456|ref|ZP_05024235.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
gi|196182662|gb|EDX77647.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
Length = 2020
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 39 TELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYR 98
TE+ L+ + ++ D PD PII+VN FE TGY A EVLG+NCRFLQ
Sbjct: 320 TEVRLQLLERAIAASSNGILITDPNVPDNPIIFVNPGFERITGYSAQEVLGKNCRFLQGD 379
Query: 99 DPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVT 158
+ ++ P +D +++ L+ + L N +KDGT N L ++PIRD G +T
Sbjct: 380 N----QQQPGLD-----KLKAALKNEQDCHVILQNTRKDGTRFWNELSISPIRDRHGKLT 430
Query: 159 HIIGIQ 164
H IGIQ
Sbjct: 431 HYIGIQ 436
>gi|319782894|ref|YP_004142370.1| PAS sensor protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317168782|gb|ADV12320.1| PAS sensor protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 382
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 29/207 (14%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T S ++ D D PI++ N F TGY EVLGRNCRFLQ P D
Sbjct: 36 TRMSMIITDPRQQDNPIVFANDAFLRLTGYERHEVLGRNCRFLQ---------GPKTDKA 86
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
V +IR +E+ + ++LN++KDG+ N L ++P+ +D G +Q F +++D
Sbjct: 87 AVEQIRAAIEDETDVSVDILNYRKDGSTFWNALYISPVSNDKG------DLQFFFASQLD 140
Query: 173 LNHVSYPVFKENCNQ-QYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHN-------- 223
++ + N + +++++ + + + Q +L D + +N
Sbjct: 141 VSDRKQSESRINAEKDRFEKAVKERTAELEAALEAQ--TTLLHEVDHRVKNNLQMISSLI 198
Query: 224 ILSRLTPRDVA---SIGSVCRRIRQLT 247
I+ R T RD A S+ ++ RI L+
Sbjct: 199 IMQRRTIRDEAIRRSLTTMLERIEALS 225
>gi|325276367|ref|ZP_08142143.1| histidine kinase [Pseudomonas sp. TJI-51]
gi|324098494|gb|EGB96564.1| histidine kinase [Pseudomonas sp. TJI-51]
Length = 382
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 19/149 (12%)
Query: 20 SGKRQKCSFEGGGGGGGDDTELSLKPGLLFYPTTPTS---FVVADAFDPDFPIIYVNKVF 76
S K+ + S + G ++S P +F+ T+ +V D D PII+ N+ F
Sbjct: 8 SSKKARVSNQASG-------DISELPHDMFFAAVETTRMPMIVTDPNRDDNPIIFANRAF 60
Query: 77 EIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKK 136
TGY E+LGRNCRFLQ P D VV+ +R +E+ ++ E+LN++K
Sbjct: 61 LDMTGYELAEILGRNCRFLQ---------GPETDTEVVATLRDSIEQRVDIATEILNYRK 111
Query: 137 DGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
DG+ N L ++PI ++ G + + Q+
Sbjct: 112 DGSSFWNALFISPIFNERGDLIYHFASQL 140
>gi|83311390|ref|YP_421654.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
gi|82946231|dbj|BAE51095.1| Signal transduction histidine kinase [Magnetospirillum magneticum
AMB-1]
Length = 690
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 35 GGDDTELSLKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRF 94
G D+ L L +L +A+ D P+IY N FE TGY A VLGRN RF
Sbjct: 321 GRDEARLRLSDMVL--SNVSNGVTIAEVGRGDLPLIYANPAFEHITGYLAKNVLGRNARF 378
Query: 95 LQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDD 154
L DP P +D +IR L EG+ L N + DGT N+L L+P+R D
Sbjct: 379 LHEFDP----GQPGLD-----DIRAALAEGVPVSVVLRNQRADGTLFWNQLSLSPMRGTD 429
Query: 155 GTVTHIIGIQ 164
G +TH +G+Q
Sbjct: 430 GKLTHWVGVQ 439
>gi|334184719|ref|NP_001189690.1| galactose oxidase/kelch repeat-containing protein [Arabidopsis
thaliana]
gi|330254149|gb|AEC09243.1| galactose oxidase/kelch repeat-containing protein [Arabidopsis
thaliana]
Length = 511
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 353 SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAK-----QPTWIEVSGGAPP 407
+ P R GHT ++ S +VVFGG + L+D+ V D++ K + T E G P
Sbjct: 15 TPPQARSGHTAVNVGKSMVVVFGGLVDKKFLSDIIVYDIENKLWFEPECTGSESEGQVGP 74
Query: 408 LPRSWHSSCIIEGSKLVVSGGCTDAGVL------LSDTYLLDLTTDKPMWREIPTSWS-- 459
PR++H + I+ + G + L D ++LD TD W E+ TS+
Sbjct: 75 TPRAFHVAITIDCHMFIFGGRSGGKSLFLLINFRLGDFWVLD--TDIWQWSEL-TSFGDL 131
Query: 460 PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVG 519
P R + + G K+++ GG L + Y +D E W +L
Sbjct: 132 PTPRDFAAAAAIGSQKIVLCGGWDGKKWL----SDVYVMDTMSLE--WLEL--------- 176
Query: 520 SQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLF----LLDPSEEKPSWRILNV 575
S S +PPPR H A +M R+++FGG G L+ L+D E P W L +
Sbjct: 177 SVSGSLPPPRCGHTA-TMVEKRLLVFGGRGGGGPIMGDLWALKGLIDEERETPGWTQLKL 235
Query: 576 PGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWV 608
PGQ P GH T GG +L+ GGH W+
Sbjct: 236 PGQAPSSRCGH-TVTSGGHYLLLFGGHGTGGWL 267
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVL----NLDAANPEWRR 348
W + +V G++ P RC +A RL++FGG G M D + L + + P W +
Sbjct: 173 WLELSVSGSLPPPRCGHTATMVEKRLLVFGGRGGGGPIMGDLWALKGLIDEERETPGWTQ 232
Query: 349 VSVK-SSPPGRWGHTLSSLNGSWLVVFGGCGRQGLL-------NDVFVLDLDAKQPTWIE 400
+ + +P R GHT++S G +L++FGG G G L ND +LD Q +
Sbjct: 233 LKLPGQAPSSRCGHTVTS-GGHYLLLFGGHGTGGWLSRYDVYYNDTIILDRVTAQWKRLP 291
Query: 401 VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWRE--IPTSW 458
+ G PP PR++H+ I L++ G D + D + L + D P+ + +P
Sbjct: 292 I-GNEPPPPRAYHTMTCIGARHLLIGG--FDGKLTFGDLWWL-VPEDDPIAKRSSVPQVV 347
Query: 459 SPP 461
+PP
Sbjct: 348 NPP 350
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 133/325 (40%), Gaps = 46/325 (14%)
Query: 305 SRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSS-------PPG 357
+R +A G +V+ G V+ + + D V +++ N W S P
Sbjct: 19 ARSGHTAVNVGKSMVVVFGGLVDKKFLSDIIVYDIE--NKLWFEPECTGSESEGQVGPTP 76
Query: 358 RWGHTLSSLNGSWLVVFGGCGRQGL-------LNDVFVLDLDAKQPTWIEV-SGGAPPLP 409
R H +++ + G G + L L D +VLD D Q W E+ S G P P
Sbjct: 77 RAFHVAITIDCHMFIFGGRSGGKSLFLLINFRLGDFWVLDTDIWQ--WSELTSFGDLPTP 134
Query: 410 RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS-PPSRLGHSL 468
R + ++ I K+V+ GG D LSD Y++D + + W E+ S S PP R GH+
Sbjct: 135 RDFAAAAAIGSQKIVLCGGW-DGKKWLSDVYVMDTMSLE--WLELSVSGSLPPPRCGHTA 191
Query: 469 SVYGRTKVLMFGGLAKS----GHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
++ + ++L+FGG G L G ID E P W QL+
Sbjct: 192 TMVEK-RLLVFGGRGGGGPIMGDLWALKG---LIDEERETPGWTQLKL---------PGQ 238
Query: 525 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDP---SEEKPSWRILNVPGQ-PP 580
P R H S ++ G G S ++ D W+ L + + PP
Sbjct: 239 APSSRCGHTVTSGGHYLLLFGGHGTGGWLSRYDVYYNDTIILDRVTAQWKRLPIGNEPPP 298
Query: 581 KFAWGHSTCVVGGTRVLVLGGHTGE 605
A+ TC+ G R L++GG G+
Sbjct: 299 PRAYHTMTCI--GARHLLIGGFDGK 321
>gi|390167412|ref|ZP_10219402.1| PAS/PAC sensor hybrid histidine kinase [Sphingobium indicum B90A]
gi|389589962|gb|EIM67968.1| PAS/PAC sensor hybrid histidine kinase [Sphingobium indicum B90A]
Length = 572
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 46 GLLFYPT---TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRA 102
G +F+ T ++ D D PI++ NK F TGY EV+GRNCRFLQ D
Sbjct: 55 GTVFFAALQMTRMPMILTDPRQDDNPIVFANKAFLDLTGYEESEVVGRNCRFLQGTD--- 111
Query: 103 QRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIG 162
D V +R + E+LN+++DG+P N + +AP+ DDDGT+ +
Sbjct: 112 ------TDRETVRALREAVAAQEAISTEILNYRRDGSPFWNAVFVAPVYDDDGTLIY--- 162
Query: 163 IQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQL 215
F +++D+ + + Q + Q+ + + G D +LQ+
Sbjct: 163 ---FFASQLDVTR------RRSSEQAFRQAQKMEAIGQLTAGLAHDFNNLLQV 206
>gi|448607023|ref|ZP_21659280.1| PAS-PAC-PAC sensing histidine kinase [Haloferax sulfurifontis ATCC
BAA-897]
gi|445738451|gb|ELZ89971.1| PAS-PAC-PAC sensing histidine kinase [Haloferax sulfurifontis ATCC
BAA-897]
Length = 858
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D D P+ YVN FE TGY E +GRNCRFLQ + D V +R +E
Sbjct: 163 DGDQPLTYVNDAFEEMTGYDRQEAIGRNCRFLQGAE---------TDSEPVETLREAVES 213
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G L N++KDGTP N L+++P+ DDG +TH +G Q
Sbjct: 214 GESATVSLTNYRKDGTPFWNELKISPVY-DDGELTHFVGFQ 253
>gi|448443537|ref|ZP_21589577.1| HTR-like protein [Halorubrum saccharovorum DSM 1137]
gi|445686745|gb|ELZ39053.1| HTR-like protein [Halorubrum saccharovorum DSM 1137]
Length = 717
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P ++ D D PIIY N F TGY E++GRNCRFLQ A P
Sbjct: 277 PVGILLTDPHQDDNPIIYANDEFTDLTGYEKREIVGRNCRFLQ---GEATEDEP------ 327
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
V +R ++ EL N++KDGT NR+R+AP+ DDDG V +G Q
Sbjct: 328 VQRLRTAIDNREPVTVELRNYRKDGTEFWNRVRVAPLFDDDGEVDLFVGFQ 378
>gi|388511109|gb|AFK43618.1| unknown [Medicago truncatula]
Length = 394
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ + PD PI+Y + F TGY DEVLGRNCRFL R+ D +
Sbjct: 252 SFVLTNPHLPDMPIVYASDAFMKLTGYTRDEVLGRNCRFLGGRN---------TDDSALQ 302
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
IR ++ +LN++KD + N L ++P+RD G V + +G+QI KI+
Sbjct: 303 LIRESIKTEKLCTVRILNYRKDKSSFWNLLHISPVRDATGKVAYFVGVQIEDAYKIE 359
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
F + D + PII+ + F TG+ DEVLGR+ Q RR V E
Sbjct: 29 FTITDPSLSNHPIIFASHAFLNITGFTRDEVLGRSGSMFQ--GSATCRRS-------VME 79
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQI 165
IR + E E L+N++K+GTP L ++P+ G V H + +Q+
Sbjct: 80 IREAVREERETNVVLVNYRKNGTPFWVFLTVSPVFCVKSGAVVHFVAVQV 129
>gi|357486599|ref|XP_003613587.1| Blue-light-activated histidine kinase [Medicago truncatula]
gi|355514922|gb|AES96545.1| Blue-light-activated histidine kinase [Medicago truncatula]
Length = 394
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SFV+ + PD PI+Y + F TGY DEVLGRNCRFL R+ D +
Sbjct: 252 SFVLTNPHLPDMPIVYASDAFMKLTGYTRDEVLGRNCRFLGGRN---------TDDSALQ 302
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
IR ++ +LN++KD + N L ++P+RD G V + +G+QI KI+
Sbjct: 303 LIRESIKTEKLCTVRILNYRKDKSSFWNLLHISPVRDATGKVAYFVGVQIEDAYKIE 359
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 57 FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSE 116
F + D + PII+ + F TG+ DEVLGR+ Q RR V E
Sbjct: 29 FTITDPSLSNHPIIFASHAFLNITGFTRDEVLGRSGSMFQ--GSATCRRS-------VME 79
Query: 117 IRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIR-DDDGTVTHIIGIQI 165
IR + E E L+N++K+GTP L ++P+ G V H + +Q+
Sbjct: 80 IREAVREERETNVVLVNYRKNGTPFWVFLTVSPVFCVKSGAVVHFVAVQV 129
>gi|452978462|gb|EME78226.1| blue-light-activated transcription factor [Pseudocercospora
fijiensis CIRAD86]
Length = 1052
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR--RHPLVDPVV 113
+FVV DA DFPI+Y ++ FE TGY +LGRNCRFLQ D + + R VD
Sbjct: 396 AFVVCDAEKDDFPIVYCSENFERLTGYTKHMILGRNCRFLQSPDGQVEPGIRRKYVDDDS 455
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI 165
V ++ + E Q L+N+++ G P +N L + PI D V +G Q+
Sbjct: 456 VLYLKNMINLRRESQISLINYRRGGQPFMNLLTMIPITWDTEQVKFFVGFQV 507
>gi|418059569|ref|ZP_12697514.1| signal transduction histidine kinase [Methylobacterium extorquens
DSM 13060]
gi|373566905|gb|EHP92889.1| signal transduction histidine kinase [Methylobacterium extorquens
DSM 13060]
Length = 366
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ +PT VV D D P+++ N F TGY +E+ G+NCR LQ PL
Sbjct: 23 FEASPTPMVVTDPRRGDNPVVWANGAFLGLTGYAREELYGQNCRMLQ---------GPLT 73
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
D V+ +R L G F+GELLN++KDGT N + + P+ D+ G V Q
Sbjct: 74 DAAVLQTMRSALATGRPFEGELLNYRKDGTSFWNGMTINPVCDEAGKVLFFFSAQ 128
>gi|423691124|ref|ZP_17665644.1| blue-light-activated histidine kinase [Pseudomonas fluorescens
SS101]
gi|387999199|gb|EIK60528.1| blue-light-activated histidine kinase [Pseudomonas fluorescens
SS101]
Length = 531
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 48 LFYPTTPTS---FVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQR 104
LF+ S +V D +PD PII+ N+ F TG+ DEV+GRNCRFLQ
Sbjct: 24 LFFAAMQASHSAMIVTDPAEPDNPIIFANQAFLTLTGFELDEVIGRNCRFLQ-------- 75
Query: 105 RHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
P D + +++R +E E E+LN++KDG+ N L ++P+ ++ G + + Q
Sbjct: 76 -GPQTDKNALHQVQRAVERHHEACVEVLNYRKDGSTFWNELFISPLFNERGQLVYFFASQ 134
Query: 165 I 165
+
Sbjct: 135 L 135
>gi|222481465|ref|YP_002567701.1| PAS/PAC sensor signal transduction histidine kinase [Halorubrum
lacusprofundi ATCC 49239]
gi|222454841|gb|ACM59104.1| PAS/PAC sensor signal transduction histidine kinase [Halorubrum
lacusprofundi ATCC 49239]
Length = 587
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 54 PTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVV 113
P V+D PD P+I VN F TGY +E LGRNCRFLQ R +
Sbjct: 127 PIGITVSDPSQPDNPLIQVNDGFCTLTGYDREEFLGRNCRFLQGEATREE---------T 177
Query: 114 VSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ--IFSEAKI 171
V+E+ +E +L N++KDG+ NR+ PIRDD GTV++ +G Q I +E +
Sbjct: 178 VAEMGAAIEAQEPVTVDLRNYRKDGSMFWNRVTTIPIRDDSGTVSNFLGYQQNITNEKRY 237
Query: 172 DLNHVSYPVFKENCNQQY-----DQSAQYFS------GGHSP 202
+ + + V E + D + QY + G+SP
Sbjct: 238 EQDLSLFKVQSEQSEKAVVITDSDGTIQYVNPTFERVNGYSP 279
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D D I YVN FE GY E +GR R L+ +Q+ D +E+ + +
Sbjct: 259 DSDGTIQYVNPTFERVNGYSPAEAIGRTPRILK----SSQQ-----DKEFYTELWETITD 309
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGI 163
G ++ EL+N K G + + P+ D+ G +TH +G+
Sbjct: 310 GDVWKSELVNKTKFGELYEAKQTITPVTDEKGDITHFVGM 349
>gi|448290150|ref|ZP_21481304.1| HTR-like protein [Haloferax volcanii DS2]
gi|445580152|gb|ELY34540.1| HTR-like protein [Haloferax volcanii DS2]
Length = 385
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 55 TSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVV 114
+ VV D PD PI+Y+N FE TGY A+ V GR+ RFL P DP V
Sbjct: 276 VAIVVIDPSRPDNPIVYLNAAFETLTGYDAESVTGRSYRFLC---------GPETDPETV 326
Query: 115 SEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTV 157
+E+RR + G E+ N+ G P V+RL + P+RDD+G +
Sbjct: 327 AEVRRAGDAGESISTEIRNYDAHGDPFVSRLDIRPVRDDNGAL 369
>gi|302811233|ref|XP_002987306.1| hypothetical protein SELMODRAFT_426157 [Selaginella moellendorffii]
gi|300144941|gb|EFJ11621.1| hypothetical protein SELMODRAFT_426157 [Selaginella moellendorffii]
Length = 571
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 109/241 (45%), Gaps = 27/241 (11%)
Query: 257 CQNAWGRE---VTGALELMTKKLGWGRLARELTTLEAVCWRKFTVRGAVEPSRCNFSACA 313
CQ W + + G +E +KKL L LE+ W G V +R S
Sbjct: 131 CQAFWETKLLVIGGRIEPKSKKLRAFAL-----DLESQSWSVLAPEGEVPVARTGQSVVQ 185
Query: 314 AGNRLVLFGGEGVNMQPMDDTFVLNLDA---ANPEWRRVSVK----SSPPGRWGHTLSSL 366
G+ L++FGGE Q ++D +LNL P+ R+ S+ S P R GH+
Sbjct: 186 VGSSLIIFGGEDSKGQMLNDLHILNLKTLVWRPPKTRQASLMMRDGSKPSPRRGHSAVCY 245
Query: 367 NGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTW-IEVSGGAPPLPRSWHSSCIIEGSKLVV 425
N +++V+GG + ND++VLDL + W E G P PR+ H+ ++ GSK +
Sbjct: 246 NERYMLVYGGKAQGNYYNDIYVLDLQNME--WSKEKPRGTVPSPRAGHAGVMV-GSKWYI 302
Query: 426 SGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSW--SPPSRLGHSL---SVYGRTKVLMFG 480
GG G +L + D W+ + T +P + G SL G+ +L+FG
Sbjct: 303 VGGEYKGGEVLE---TMAFNVDSGNWQTVTTVQPGTPLANDGISLVKVRTKGKVFLLVFG 359
Query: 481 G 481
G
Sbjct: 360 G 360
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 136/334 (40%), Gaps = 56/334 (16%)
Query: 293 WRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGV-----NMQPMDDTFVLNLDAANPEWR 347
W F G+ P+R +A + G R+ + GG ++Q + F L D NP+
Sbjct: 60 WCLFVPTGSFPPARAKHAALSVGRRMFVLGGVSAGGILDDVQVLFSIF-LRRDDLNPKLA 118
Query: 348 RVSVKSSPPGRWGHTLSSLNGSW----LVVFGGCGRQGLLNDVFVLDLDAKQPTW-IEVS 402
+ +K+ G SS W LV+ G + F LDL+++ +W +
Sbjct: 119 QKRLKA------GTYQSSCQAFWETKLLVIGGRIEPKSKKLRAFALDLESQ--SWSVLAP 170
Query: 403 GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWS--- 459
G P+ R+ S + GS L++ GG G +L+D ++L+L T +WR T +
Sbjct: 171 EGEVPVARTGQSVVQV-GSSLIIFGGEDSKGQMLNDLHILNLKT--LVWRPPKTRQASLM 227
Query: 460 ------PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECN 513
P R GHS Y +L++GG A+ + + Y +DL + E W + +
Sbjct: 228 MRDGSKPSPRRGHSAVCYNERYMLVYGGKAQGNYY----NDIYVLDLQNME--WSKEKPR 281
Query: 514 AFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRIL 573
VP PR H V + I+ G G + F +D +W+ +
Sbjct: 282 ---------GTVPSPRAGHAGVMVGSKWYIVGGEYKGGEVLETMAFNVDSG----NWQTV 328
Query: 574 NV--PGQPPKFAWGHSTCVV---GGTRVLVLGGH 602
PG P G S V G +LV GGH
Sbjct: 329 TTVQPGTPLAND-GISLVKVRTKGKVFLLVFGGH 361
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 18/167 (10%)
Query: 454 IPTSWSPPSRLGHSLSVYGRTKVLMFGGLAKSGHLR-LRSGESYTIDLGDEEPQWKQLEC 512
+PT PP+R H+ GR ++ + GG++ G L ++ S + D P+ Q
Sbjct: 64 VPTGSFPPARAKHAALSVGR-RMFVLGGVSAGGILDDVQVLFSIFLRRDDLNPKLAQKRL 122
Query: 513 NAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRI 572
A T S A ++++ GG I + F LD E SW +
Sbjct: 123 KAGTYQSSCQAFWET-------------KLLVIGGRIEPKSKKLRAFALDL--ESQSWSV 167
Query: 573 LNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 619
L G+ P G S VG + +++ GG + +LN+LH L L +
Sbjct: 168 LAPEGEVPVARTGQSVVQVGSS-LIIFGGEDSKGQMLNDLHILNLKT 213
>gi|294505985|ref|YP_003570043.1| redox sensing protein [Salinibacter ruber M8]
gi|294342313|emb|CBH23091.1| Putative redox sensing protein [Salinibacter ruber M8]
Length = 1668
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
+P I+Y N+ FE TGYR EVLGR R LQ P D V+ +R LE
Sbjct: 366 EPGPRIVYANEAFEAMTGYREAEVLGRTPRVLQ---------GPETDEAVLGSLRAALEA 416
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G +QGE +N++KDGTP V + +AP+ + G + H + +Q
Sbjct: 417 GEHWQGETVNYRKDGTPYVVQWNVAPVTGEGGEIQHWVSVQ 457
>gi|218532295|ref|YP_002423111.1| signal transduction histidine kinase [Methylobacterium extorquens
CM4]
gi|218524598|gb|ACK85183.1| signal transduction histidine kinase [Methylobacterium extorquens
CM4]
Length = 366
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ +PT VV D D P+++ N F TGY +E+ G+NCR LQ PL
Sbjct: 23 FEASPTPMVVTDPRRGDNPVVWANGAFLGLTGYAREELYGQNCRMLQ---------GPLT 73
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
D V+ +R L G F+GELLN++KDGT N + + P+ D+ G V Q
Sbjct: 74 DATVLQTMRSALATGRPFEGELLNYRKDGTSFWNGMTINPVCDEAGKVLFFFSAQ 128
>gi|19075851|ref|NP_588351.1| cell end marker Tea1 [Schizosaccharomyces pombe 972h-]
gi|6094446|sp|P87061.1|TEA1_SCHPO RecName: Full=Tip elongation aberrant protein 1; AltName:
Full=Altered polarity protein 8; AltName: Full=Cell
polarity protein tea1
gi|2065436|emb|CAA73246.1| tea1p [Schizosaccharomyces pombe]
gi|3618212|emb|CAA20875.1| cell end marker Tea1 [Schizosaccharomyces pombe]
Length = 1147
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 132/286 (46%), Gaps = 31/286 (10%)
Query: 346 WRRVSVKSSPP--GRWGHT--LSSLNGSWLVVFGGCGRQGL-LNDVFVLDLDAKQPTWIE 400
W +++V+ S R+ H L + G + +FGG ND++VL+L Q T +
Sbjct: 66 WSKLTVRGSSNVLPRYSHASHLYAEGGQEIYIFGGVASDSQPKNDLWVLNLATSQFTSLR 125
Query: 401 VSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVL-LSDTYLLDLTTDKPMWREIPTSWS 459
S G P PR H+S +I G+ +V GG T+ V D L L T +W++ S +
Sbjct: 126 -SLGETPSPRLGHASILI-GNAFIVFGGLTNHDVADRQDNSLYLLNTSSLVWQKANASGA 183
Query: 460 PPS-RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQWKQLECNAF 515
PS R GH++S G +K+ +FGG L + DL + + +W+
Sbjct: 184 RPSGRYGHTISCLG-SKICLFGGRL----LDYYFNDLVCFDLNNLNTSDSRWE------- 231
Query: 516 TGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNV 575
+ S PP R HVA + ++ IFGG+ G + + L+ P ++ +W +
Sbjct: 232 --LASVVNDPPPARAGHVAFTF-SDKLYIFGGT-DGANFFNDLWCYHP--KQSAWSKVET 285
Query: 576 PGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
G P GH+ VV G + V GG + LN+L+ L+SK
Sbjct: 286 FGVAPNPRAGHAASVVEGI-LYVFGGRASDGTFLNDLYAFRLSSKH 330
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 9/204 (4%)
Query: 285 LTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDT-FVL-NLDAA 342
L ++ W+K GA R + G+++ LFGG ++ D F L NL+ +
Sbjct: 167 LLNTSSLVWQKANASGARPSGRYGHTISCLGSKICLFGGRLLDYYFNDLVCFDLNNLNTS 226
Query: 343 NPEWRRVSVKSS-PPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEV 401
+ W SV + PP R GH + + L +FGG ND++ KQ W +V
Sbjct: 227 DSRWELASVVNDPPPARAGHVAFTFSDK-LYIFGGTDGANFFNDLWC--YHPKQSAWSKV 283
Query: 402 -SGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSP 460
+ G P PR+ H++ ++EG L V GG G L+D Y L++ K ++ ++P
Sbjct: 284 ETFGVAPNPRAGHAASVVEGI-LYVFGGRASDGTFLNDLYAFRLSS-KHWYKLSDLPFTP 341
Query: 461 PSRLGHSLSVYGRTKVLMFGGLAK 484
R H+LS G T VL+ G K
Sbjct: 342 SPRSSHTLSCSGLTLVLIGGKQGK 365
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 147/339 (43%), Gaps = 55/339 (16%)
Query: 288 LEAVCWRKFTVRGA--VEPSRCNFSACAA--GNRLVLFGGEGVNMQPMDDTFVLNLDAAN 343
+ A W K TVRG+ V P + S A G + +FGG + QP +D +VLNL +
Sbjct: 61 ITASPWSKLTVRGSSNVLPRYSHASHLYAEGGQEIYIFGGVASDSQPKNDLWVLNLATSQ 120
Query: 344 PEWRRVSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLN--DVFVLDLDAKQPTWIEV 401
R S+ +P R GH S L G+ +VFGG + + D + L+ W +
Sbjct: 121 FTSLR-SLGETPSPRLGHA-SILIGNAFIVFGGLTNHDVADRQDNSLYLLNTSSLVWQKA 178
Query: 402 SG-GAPPLPRSWHS-SCIIEGSKLVVSGGCTDAGVLLSDTYLLD--------LTTDKPMW 451
+ GA P R H+ SC+ GSK+ + GG L D Y D L T W
Sbjct: 179 NASGARPSGRYGHTISCL--GSKICLFGG------RLLDYYFNDLVCFDLNNLNTSDSRW 230
Query: 452 REIPTSWS--PPSRLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQ--- 506
E+ + + PP+R GH + K+ +FGG G ++ DL P+
Sbjct: 231 -ELASVVNDPPPARAGHVAFTFS-DKLYIFGGT---------DGANFFNDLWCYHPKQSA 279
Query: 507 WKQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEE 566
W ++E V P PR H A S+ G + +FGG + + L+ S
Sbjct: 280 WSKVET---------FGVAPNPRAGH-AASVVEGILYVFGGRASDGTFLNDLYAFRLS-S 328
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGE 605
K +++ ++P P + +C G ++++GG G+
Sbjct: 329 KHWYKLSDLPFTPSPRSSHTLSC--SGLTLVLIGGKQGK 365
>gi|299115347|emb|CBN74167.1| aureochrome 2 [Ectocarpus siliculosus]
Length = 441
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 56 SFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 115
SF V D PD PI+Y + F TGY +VLGRNCRFLQ P DP V+
Sbjct: 281 SFCVTDPQMPDNPIVYASDTFIELTGYDRAQVLGRNCRFLQ---------GPDTDPDAVA 331
Query: 116 EIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
+IR+ +EEG + L +K DGT N + +A +R+ + + + +GIQ
Sbjct: 332 KIRKGIEEGSDTSVYLRQYKADGTVFWNHVFVAALRNSEHKIINYVGIQ 380
>gi|401840429|gb|EJT43256.1| KEL1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1169
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 346 WRRVSVKSSPPGRWGHTLSSL--NGSWLVVFGGCGRQGLLNDVFVLD-LDAK---QPTWI 399
W R+ +++SP R+ H S+ + + + V GG Q + D ++L LD T I
Sbjct: 113 WNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGLHDQSVYGDTWILTALDNATKFSTTTI 172
Query: 400 EVSGGAPPLPRSWHSSCIIEGSKLVVSGGCT----DAGVLLSDTYLLDLTTDKPMWR-EI 454
++S PP PR H++ + G+ VV GG T G++ D YLL++ + K W
Sbjct: 173 DISEATPP-PRVGHAAVLC-GNAFVVFGGDTHKVNKEGLMDDDIYLLNINSYK--WTVPA 228
Query: 455 PTSWSPPSRLGHSLSVYG----RTKVLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQW 507
P P R GH +S+ +TK+ +FGG + + DL + W
Sbjct: 229 PVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTYF----NDLAVYDLSSFRRPDSHW 284
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLFLLDPSEE 566
+ L+ AFT PPP + +S ++ +FGG ++ GL + +F+ DP+
Sbjct: 285 EFLKPKAFT---------PPPITNFTMISYDS-KLWVFGGDTLQGL--INDVFMYDPAIN 332
Query: 567 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQ 621
W I+ G+ P H++ VV + V+GG + LN ++ L L S +
Sbjct: 333 --DWFIIETTGEKPPPVQEHAS-VVYNDLMCVVGGKDEHDAYLNSVYFLNLKSHK 384
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 317 RLVLFGGEGVNMQPMDDTFVLNLDA--------ANPEWRRVSVKS-SPPGRWGHTLSSLN 367
+L +FGG+ DDT+ +L + W + K+ +PP T+ S +
Sbjct: 253 KLYVFGGQ------FDDTYFNDLAVYDLSSFRRPDSHWEFLKPKAFTPPPITNFTMISYD 306
Query: 368 GSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSKLVVSG 427
S L VFGG QGL+NDVF+ D IE +G PP P H+S + VV G
Sbjct: 307 -SKLWVFGGDTLQGLINDVFMYDPAINDWFIIETTGEKPP-PVQEHASVVYNDLMCVV-G 363
Query: 428 GCTDAGVLLSDTYLLDLTTDKPMWREIP--TSWSPPSRLGHSLSVYGRTKVLMFGGLAKS 485
G + L+ Y L+L + K W ++P T+ P R GHSL++ K+L+ GG K
Sbjct: 364 GKDEHDAYLNSVYFLNLKSHK--WFKLPVFTAGIPQGRSGHSLTLLKDDKILIMGG-DKF 420
Query: 486 GHLRLRSGESYTIDL 500
+ R+ + +T D+
Sbjct: 421 DYARVEEFDLHTSDI 435
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 115/263 (43%), Gaps = 32/263 (12%)
Query: 298 VRGAVEPSRCNFSACAAGNRLVLFGGE--GVNMQPM--DDTFVLNLDAANPEWRR-VSVK 352
+ A P R +A GN V+FGG+ VN + + DD ++LN+++ +W V
Sbjct: 174 ISEATPPPRVGHAAVLCGNAFVVFGGDTHKVNKEGLMDDDIYLLNINSY--KWTVPAPVG 231
Query: 353 SSPPGRWGHTLSSLNGSW----LVVFGGCGRQGLLNDVFVLDLDA-KQPT--WIEVSGGA 405
P GR+GH +S + + L VFGG ND+ V DL + ++P W + A
Sbjct: 232 PRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTYFNDLAVYDLSSFRRPDSHWEFLKPKA 291
Query: 406 PPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTS-WSPPSRL 464
P + + I SKL V GG T G L++D ++ D + W I T+ PP
Sbjct: 292 FTPPPITNFTMISYDSKLWVFGGDTLQG-LINDVFMYDPAIND--WFIIETTGEKPPPVQ 348
Query: 465 GHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAV 524
H+ VY ++ G +L Y ++L +W +L FT A
Sbjct: 349 EHASVVYNDLMCVVGGKDEHDAYL----NSVYFLNLKSH--KWFKLPV--FT------AG 394
Query: 525 VPPPRLDHVAVSMPCGRIIIFGG 547
+P R H + +I+I GG
Sbjct: 395 IPQGRSGHSLTLLKDDKILIMGG 417
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 450 MWREIPTSWSPPSRLGHSLSVY--GRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQW 507
+W I SP R H S Y + ++ + GGL H + G+++ + D ++
Sbjct: 112 VWNRIKLQNSPFPRYRHVASAYVTDKNQIYVIGGL----HDQSVYGDTWILTALDNATKF 167
Query: 508 KQLECNAFTGVGSQSAVVPPPRLDHVAVSMPCGR-IIIFGGSIAGLHSP----SQLFLLD 562
T S PPPR+ H AV CG ++FGG ++ ++LL+
Sbjct: 168 S-------TTTIDISEATPPPRVGHAAVL--CGNAFVVFGGDTHKVNKEGLMDDDIYLLN 218
Query: 563 PSEEKPSWRILNVPGQPPKFAWGHSTCVVG----GTRVLVLGGHTGEEWVLNELHELCLA 618
+ K W + G P +GH ++ T++ V GG + + N+L L+
Sbjct: 219 INSYK--WTVPAPVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFDDTY-FNDLAVYDLS 275
Query: 619 S 619
S
Sbjct: 276 S 276
>gi|402772327|ref|YP_006591864.1| AraC family transcriptional regulator [Methylocystis sp. SC2]
gi|401774347|emb|CCJ07213.1| Transcriptional regulator with PAS/PAC sensors, AraC family
[Methylocystis sp. SC2]
Length = 150
Score = 79.0 bits (193), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 15/120 (12%)
Query: 59 VADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIR 118
+AD PD PI+Y NK FE TGY +E++GRNCRFLQ D + PL R
Sbjct: 28 LADPDQPDAPIVYANKAFESMTGYGQEEIIGRNCRFLQGDDRDQEGLAPL---------R 78
Query: 119 RCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ------IFSEAKID 172
+ + L N++K+G N+L + P+ D G V + +G+Q + +EA+I+
Sbjct: 79 EAMRTHQHIEVTLRNYRKNGELFFNKLNITPLLDSRGAVIYYLGVQYDVTELVRAEAEIN 138
>gi|424878480|ref|ZP_18302120.1| PAS domain S-box [Rhizobium leguminosarum bv. trifolii WU95]
gi|392520972|gb|EIW45701.1| PAS domain S-box [Rhizobium leguminosarum bv. trifolii WU95]
Length = 411
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ T +V D D PII+ N FE TGY DE++GRNCR LQ P RR
Sbjct: 68 FKATRMPMIVTDPAQHDNPIIFCNAAFEKMTGYSNDELIGRNCRLLQ--GPETDRRS--- 122
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI-FSE 168
V IR + G + ++LN++KDG+ N L ++P+RDD+G + + Q+ F+
Sbjct: 123 ----VGYIRDSVARGQDISVDILNYRKDGSTFWNALFISPVRDDEGRIIYFFASQLDFTT 178
Query: 169 AK 170
K
Sbjct: 179 VK 180
>gi|395490894|ref|ZP_10422473.1| multi-sensor hybrid histidine kinase [Sphingomonas sp. PAMC 26617]
Length = 557
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 78/177 (44%), Gaps = 11/177 (6%)
Query: 53 TPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPV 112
T V+ D PD PI++ NK F TGY DEVLG NCRFLQ P +P
Sbjct: 33 TRMPMVITDPRKPDNPIVFANKSFYRLTGYAHDEVLGHNCRFLQ---------GPETEPA 83
Query: 113 VVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQIFSEAKID 172
V + + + ++ N+ KDG P NRL +AP+ D DG++ + Q A D
Sbjct: 84 TVELVCAAIAAREPIEIDIRNYTKDGHPFWNRLLIAPVFDTDGSIAYFFASQFDVTADYD 143
Query: 173 LNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAHNILSRLT 229
N N++ A L Q Q + + QL+ LAH+ + LT
Sbjct: 144 -NLADRVRELTEANERLRVEAAARKQIEEALRQSQKMEAVGQLTGG-LAHDFNNLLT 198
>gi|156404177|ref|XP_001640284.1| predicted protein [Nematostella vectensis]
gi|156227417|gb|EDO48221.1| predicted protein [Nematostella vectensis]
Length = 538
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 106/260 (40%), Gaps = 22/260 (8%)
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTF--VLNLDAANPEWRR 348
V W + G V R S A G+ L LFGG N +D + D W
Sbjct: 64 VSWERMRQLGDVPCGRDGHSLNAVGSVLYLFGGS--NFPEAEDCLDGLYAYDIGTLSWEL 121
Query: 349 VSVKSSPPGRWGHTLSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPL 408
+ P G T ++ + L VFGG R N +++L+ T + SG PP
Sbjct: 122 CPTQGRQPKTLGQTTVAIRDT-LYVFGGIYRGEANNKLYMLNTGNLTWTPLVTSGQIPP- 179
Query: 409 PRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPP-SRLGHS 467
PR H+ C + G K +SGG +D Y D T +W I P R H+
Sbjct: 180 PRCDHA-CTVIGEKFYISGGSGGEKTWFNDLYCFDTVT--LIWHYINAQGHLPFPRSLHT 236
Query: 468 LSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQSAVVPP 527
+ Y + +FGG S R + + +L + +WK+L C T P
Sbjct: 237 ICAYHDKDIYLFGGTNDSAKGRSPFNDVFKFNLS--KSKWKKLHCEGPT---------PD 285
Query: 528 PRLDHVAVSMPCGRIIIFGG 547
RL H A+ + G++I+FGG
Sbjct: 286 SRLGHCAIII-YGQMIVFGG 304
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 11/147 (7%)
Query: 291 VCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVS 350
+ W G + P RC+ + G + + GG G +D + D W ++
Sbjct: 166 LTWTPLVTSGQIPPPRCDHACTVIGEKFYISGGSGGEKTWFNDLYC--FDTVTLIWHYIN 223
Query: 351 VKSSPP-GRWGHTLSSLNGSWLVVFGGCGRQGL----LNDVFVLDLDAKQPTWIEVSGGA 405
+ P R HT+ + + + +FGG NDVF +L + W ++
Sbjct: 224 AQGHLPFPRSLHTICAYHDKDIYLFGGTNDSAKGRSPFNDVFKFNLSKSK--WKKLHCEG 281
Query: 406 P-PLPRSWHSSCIIEGSKLVVSGGCTD 431
P P R H + II G +++V GG D
Sbjct: 282 PTPDSRLGHCAIIIYG-QMIVFGGMND 307
>gi|50289821|ref|XP_447342.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526652|emb|CAG60279.1| unnamed protein product [Candida glabrata]
Length = 1136
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 136/327 (41%), Gaps = 55/327 (16%)
Query: 327 NMQPMDDTFVLNLDAANPE-------------WRRVSVKSSPPGRWGHTLSS--LNGSWL 371
N M V NL +NP W R+ + +SP R+ H SS + +
Sbjct: 115 NPHEMKQRNVSNLQQSNPHTRRILPSEPDYTPWGRIRLSNSPFPRYRHVSSSHITDQGKI 174
Query: 372 VVFGGCGRQGLLNDVFVL---DLDAK------QPTWIEVSGGAPPLPRSWHSSCIIEGSK 422
V GG Q + D ++L D+D + T IE++ PP PR H+S + G+
Sbjct: 175 YVIGGLHDQSVYGDTWILTASDIDKTGAINSFKSTTIEITESTPP-PRVGHASTLC-GNA 232
Query: 423 LVVSGGCTDA----GVLLSDTYLLDLTTDKPMWR-EIPTSWSPPSRLGHSLSVYG--RTK 475
VV GG T G++ D YLL++ + K W P P R GH + +TK
Sbjct: 233 FVVFGGDTHKVNSDGLMDDDLYLLNINSYK--WTIPKPVGQRPLGRYGHKIVTISAEQTK 290
Query: 476 VLMFGGLAKSGHLRLRSGESYTIDLGD---EEPQWKQLECNAFTGVGSQSAVVPPPRLDH 532
+ +FGG + G+ DL + W L+ + F PPP +H
Sbjct: 291 LYLFGGQFDDTYF----GDLAVFDLSSFRRPDSHWVFLKPSGFN---------PPPLTNH 337
Query: 533 VAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVG 592
V+ +I +FGG ++++L P+ SW I+ G P H+ +V
Sbjct: 338 TMVTY-QDKIWVFGGDTLEEGLINRVYLYSPTNN--SWEIVETTGDIPPPMQEHA-AIVY 393
Query: 593 GTRVLVLGGHTGEEWVLNELHELCLAS 619
+ V+GG E+ LN L+ L L S
Sbjct: 394 KDLMCVVGGKDAEDNYLNTLYFLNLQS 420
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 22/227 (9%)
Query: 278 WGRLARELTTLEAVCWRKFT---VRGAVEPSRCNFSACAAGNRLVLFGGE--GVNMQPM- 331
W A ++ A+ K T + + P R ++ GN V+FGG+ VN +
Sbjct: 190 WILTASDIDKTGAINSFKSTTIEITESTPPPRVGHASTLCGNAFVVFGGDTHKVNSDGLM 249
Query: 332 -DDTFVLNLDAANPEWRRVS-VKSSPPGRWGHTLSSLNG--SWLVVFGGCGRQGLLNDVF 387
DD ++LN+++ +W V P GR+GH + +++ + L +FGG D+
Sbjct: 250 DDDLYLLNINSY--KWTIPKPVGQRPLGRYGHKIVTISAEQTKLYLFGGQFDDTYFGDLA 307
Query: 388 VLDLDA-KQP----TWIEVSGGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLL 442
V DL + ++P +++ SG PP P + H+ + K+ V GG T L++ YL
Sbjct: 308 VFDLSSFRRPDSHWVFLKPSGFNPP-PLTNHTMVTYQ-DKIWVFGGDTLEEGLINRVYLY 365
Query: 443 DLTTDKPMWREIPTSWS-PPSRLGHSLSVYGRTKVLMFGGLAKSGHL 488
T + W + T+ PP H+ VY ++ G A+ +L
Sbjct: 366 SPTNNS--WEIVETTGDIPPPMQEHAAIVYKDLMCVVGGKDAEDNYL 410
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 21/181 (11%)
Query: 312 CAAGNRLVLFGGEGVNMQPMDDTF-----VLNLDA-ANPEWRRVSVKSS---PPGRWGHT 362
A +L LFGG+ DDT+ V +L + P+ V +K S PP HT
Sbjct: 285 SAEQTKLYLFGGQ------FDDTYFGDLAVFDLSSFRRPDSHWVFLKPSGFNPPPLTNHT 338
Query: 363 LSSLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVSGGAPPLPRSWHSSCIIEGSK 422
+ + V G +GL+N V++ +E +G PP P H + I+
Sbjct: 339 MVTYQDKIWVFGGDTLEEGLINRVYLYSPTNNSWEIVETTGDIPP-PMQEH-AAIVYKDL 396
Query: 423 LVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIP--TSWSPPSRLGHSLSVYGRTKVLMFG 480
+ V GG L+ Y L+L + K W ++P + P R GHS+++ ++L+ G
Sbjct: 397 MCVVGGKDAEDNYLNTLYFLNLQSLK--WFKLPFYKNNIPQGRSGHSVTLLKNDQILIMG 454
Query: 481 G 481
G
Sbjct: 455 G 455
>gi|448624188|ref|ZP_21670261.1| PAS-PAC-PAC sensing histidine kinase [Haloferax denitrificans ATCC
35960]
gi|445750155|gb|EMA01594.1| PAS-PAC-PAC sensing histidine kinase [Haloferax denitrificans ATCC
35960]
Length = 858
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 64 DPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEE 123
D D P+ YVN FE TGY E +GRNCRFLQ + D V +R +E
Sbjct: 163 DGDQPLTYVNDAFEEMTGYDRQEAVGRNCRFLQGAE---------TDSEPVETLREAVEN 213
Query: 124 GIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQ 164
G L N++KDGTP N L+++P+ DDG +TH +G Q
Sbjct: 214 GESAAVSLTNYRKDGTPFWNELKISPVY-DDGELTHFVGFQ 253
>gi|241666844|ref|YP_002984928.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240862301|gb|ACS59966.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 375
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 50 YPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRAQRRHPLV 109
+ T +V D D PII+ N FE TGY DE++GRNCR LQ P RR
Sbjct: 32 FKATRMPMIVTDPAQHDNPIIFCNAAFEKMTGYSNDELIGRNCRLLQ--GPETDRRS--- 86
Query: 110 DPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIGIQI-FSE 168
V IR + G + ++LN++KDG+ N L ++P+RDD+G + + Q+ F+
Sbjct: 87 ----VGYIRDSVARGQDISVDILNYRKDGSTFWNALFISPVRDDEGRIIYFFASQLDFTT 142
Query: 169 AK 170
K
Sbjct: 143 VK 144
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.138 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,161,186,041
Number of Sequences: 23463169
Number of extensions: 513614752
Number of successful extensions: 1348949
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2268
Number of HSP's successfully gapped in prelim test: 5897
Number of HSP's that attempted gapping in prelim test: 1316462
Number of HSP's gapped (non-prelim): 20001
length of query: 625
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 476
effective length of database: 8,863,183,186
effective search space: 4218875196536
effective search space used: 4218875196536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)