BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>048756
MGGCFSSSSTSSPSSSSPSSPSSTSLKHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQ
ADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKLQYKLSASDMAALAV
KASLALQNASTVIVHLNNSRRKINPPAAAARNRISPSPAPASSFDFQFHHQKPVSRANFG
ISRSASVRKFQRYTSRRTKLAVRSFRLRLATIFEGIVM

High Scoring Gene Products

Symbol, full name Information P value
AT1G76600 protein from Arabidopsis thaliana 2.5e-39
AT1G21010 protein from Arabidopsis thaliana 1.7e-36
AT5G66580 protein from Arabidopsis thaliana 1.6e-13
AT4G37240 protein from Arabidopsis thaliana 2.4e-12
AT3G50800 protein from Arabidopsis thaliana 1.0e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  048756
        (218 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2011751 - symbol:AT1G76600 "AT1G76600" species...   300  2.5e-39   2
TAIR|locus:2037400 - symbol:AT1G21010 "AT1G21010" species...   393  1.7e-36   1
TAIR|locus:2154955 - symbol:AT5G66580 "AT5G66580" species...   176  1.6e-13   1
TAIR|locus:2115145 - symbol:AT4G37240 "AT4G37240" species...   165  2.4e-12   1
TAIR|locus:2077952 - symbol:AT3G50800 "AT3G50800" species...   159  1.0e-11   1


>TAIR|locus:2011751 [details] [associations]
            symbol:AT1G76600 "AT1G76600" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0002679 "respiratory burst involved in defense response"
            evidence=RCA] [GO:0009873 "ethylene mediated signaling pathway"
            evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
            [GO:0035556 "intracellular signal transduction" evidence=RCA]
            EMBL:CP002684 GO:GO:0005730 EMBL:AC015450 InterPro:IPR025322
            Pfam:PF14009 ProtClustDB:CLSN2687887 EMBL:AY086925 EMBL:BT000025
            IPI:IPI00522671 PIR:B96794 RefSeq:NP_565136.1 UniGene:At.19394
            IntAct:Q9C9J8 STRING:Q9C9J8 PRIDE:Q9C9J8 EnsemblPlants:AT1G76600.1
            GeneID:843993 KEGG:ath:AT1G76600 TAIR:At1g76600 InParanoid:Q9C9J8
            OMA:CNSDSLY PhylomeDB:Q9C9J8 ArrayExpress:Q9C9J8
            Genevestigator:Q9C9J8 Uniprot:Q9C9J8
        Length = 216

 Score = 300 (110.7 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
 Identities = 56/102 (54%), Positives = 82/102 (80%)

Query:    29 STAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDL 88
             +TAK++T+ G++ EY VPV+ SQVL  +  + +    + S+FLC+SDSL +DD+IPA++ 
Sbjct:    17 TTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLCNSDSLYYDDFIPAIES 76

Query:    89 EDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNAS 130
             ++ L+A+QIYFVLP SK QY+LSASDMAALAVKAS+A++ A+
Sbjct:    77 DEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAA 118

 Score = 136 (52.9 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:   173 PVSRANFGISRSASVRKFQRYTSRRTKLAVRSFRLRLATIFEG 215
             P    N G SRS SVRK +RYTS R KLAVRSFRLRL+TI+EG
Sbjct:   171 PFKDTN-GYSRSGSVRKLKRYTSGRAKLAVRSFRLRLSTIYEG 212


>TAIR|locus:2037400 [details] [associations]
            symbol:AT1G21010 "AT1G21010" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0015824 "proline transport"
            evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
            InterPro:IPR025322 Pfam:PF14009 EMBL:BT009719 EMBL:AK227779
            IPI:IPI00542519 RefSeq:NP_564129.1 UniGene:At.41675 IntAct:Q7XJ58
            PRIDE:Q7XJ58 EnsemblPlants:AT1G21010.1 GeneID:838695
            KEGG:ath:AT1G21010 TAIR:At1g21010 eggNOG:NOG324882
            HOGENOM:HOG000238862 InParanoid:Q7XJ58 OMA:AIKSEEP PhylomeDB:Q7XJ58
            ProtClustDB:CLSN2687887 Genevestigator:Q7XJ58 Uniprot:Q7XJ58
        Length = 210

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 94/198 (47%), Positives = 125/198 (63%)

Query:    30 TAKVLTLKGEVAEYKVPVIVSQVLAHQLAA--QADQEEAPS-WFLCSSDSLLFDDYIPAL 86
             T K++T+ G++ EY VPVI SQVL  + AA   +     PS +F+C SDSL +DD+IPA+
Sbjct:    17 TVKIVTVNGDLREYNVPVIASQVLEAESAAAYSSSSSSRPSSYFICDSDSLYYDDFIPAI 76

Query:    87 DLEDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNASTVIVHLNNSRRKXXXX 146
               E+ L+ADQIYFVLP SK Q +L+ASDMAALAVKAS+A+QN+    V   + RRK    
Sbjct:    77 KSEEPLQADQIYFVLPISKRQSRLTASDMAALAVKASVAIQNS----VKKESRRRKKVRI 132

Query:   147 XXXXXXXXXXXXXXXXXFDFQFHHQKP-VSR-----ANFGISRSASVRKFQRYTSRRTKL 200
                               +      +P VS+     A+ GI+RS SVR  +RYTS+R KL
Sbjct:   133 SPVMMLTGSNDSVNGNGSETTVKKGRPFVSKTAPVKASSGINRSGSVRNLRRYTSKRAKL 192

Query:   201 AVRSFRLRLATIFEGIVM 218
             AVRSFRL+L+TI+EG V+
Sbjct:   193 AVRSFRLKLSTIYEGSVV 210


>TAIR|locus:2154955 [details] [associations]
            symbol:AT5G66580 "AT5G66580" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] EMBL:CP002688 EMBL:AB013389
            InterPro:IPR025322 Pfam:PF14009 EMBL:BT004188 EMBL:BT005394
            IPI:IPI00542412 RefSeq:NP_201459.1 UniGene:At.28862
            UniGene:At.74293 EnsemblPlants:AT5G66580.1 GeneID:836790
            KEGG:ath:AT5G66580 TAIR:At5g66580 InParanoid:Q9FJY2 OMA:FTANLST
            PhylomeDB:Q9FJY2 ProtClustDB:CLSN2915363 Genevestigator:Q9FJY2
            Uniprot:Q9FJY2
        Length = 156

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 43/107 (40%), Positives = 65/107 (60%)

Query:    26 LKHSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPA 85
             L+  +AK++ L G + E+  PV V Q+L          ++ P+ F+C+SD + FDD + A
Sbjct:    10 LRSDSAKLILLDGTLQEFSSPVKVWQIL----------QKNPTSFVCNSDEMDFDDAVSA 59

Query:    86 LDLEDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLALQNASTV 132
             +   +EL + Q+YFVLP + L + L A +MAALAVKAS AL  +  V
Sbjct:    60 VAGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGV 106


>TAIR|locus:2115145 [details] [associations]
            symbol:AT4G37240 "AT4G37240" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] EMBL:CP002687 InterPro:IPR025322
            Pfam:PF14009 HOGENOM:HOG000238862 EMBL:AY085610 EMBL:BT005538
            EMBL:AK118312 IPI:IPI00533280 RefSeq:NP_568020.1 UniGene:At.43110
            IntAct:Q8LE56 EnsemblPlants:AT4G37240.1 GeneID:829878
            KEGG:ath:AT4G37240 TAIR:At4g37240 InParanoid:Q8LE56 OMA:CESTHVA
            PhylomeDB:Q8LE56 ProtClustDB:CLSN2917676 Genevestigator:Q8LE56
            Uniprot:Q8LE56
        Length = 168

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 41/98 (41%), Positives = 57/98 (58%)

Query:    29 STAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDL 88
             +TAK++   G + E+  PV V  VL           + P  F+C+SD + FDD + A+  
Sbjct:    13 ATAKLILQDGRMMEFANPVKVGYVLL----------KYPMCFICNSDDMDFDDAVAAISA 62

Query:    89 EDELEADQIYFVLPTSKLQYKLSASDMAALAVKASLAL 126
             ++EL+  QIYF LP   L+  L A +MAALAVKAS AL
Sbjct:    63 DEELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSAL 100


>TAIR|locus:2077952 [details] [associations]
            symbol:AT3G50800 "AT3G50800" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL049862 InterPro:IPR025322
            Pfam:PF14009 HOGENOM:HOG000238862 ProtClustDB:CLSN2915363
            EMBL:BT004127 EMBL:BT004986 IPI:IPI00544286 PIR:T08401
            RefSeq:NP_190649.1 UniGene:At.35454 EnsemblPlants:AT3G50800.1
            GeneID:824244 KEGG:ath:AT3G50800 TAIR:At3g50800 eggNOG:NOG254768
            InParanoid:Q9SVL8 OMA:LSYNDED PhylomeDB:Q9SVL8
            Genevestigator:Q9SVL8 Uniprot:Q9SVL8
        Length = 152

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query:    30 TAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDLE 89
             TAK++   G + E+  PV V Q+L          ++ P+ F+C+SD + FDD + A+   
Sbjct:    14 TAKLILPDGTLQEFSTPVKVWQIL----------QKNPTSFVCNSDDMDFDDAVLAVPGS 63

Query:    90 DELEADQIYFVLPTSKLQYKLSASDMAALAVKASLAL 126
             ++L   ++YFVLP + L + L A +MAALAVKAS AL
Sbjct:    64 EDLRPGELYFVLPLTWLNHPLRADEMAALAVKASSAL 100


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.132   0.371    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      218       177   0.00084  109 3  11 22  0.50    31
                                                     31  0.50    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  581 (62 KB)
  Total size of DFA:  135 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.02u 0.12s 15.14t   Elapsed:  00:00:01
  Total cpu time:  15.02u 0.12s 15.14t   Elapsed:  00:00:01
  Start:  Tue May 21 01:28:22 2013   End:  Tue May 21 01:28:23 2013

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