Query 048756
Match_columns 218
No_of_seqs 137 out of 304
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 22:31:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048756.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048756hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wwt_A Threonyl-tRNA synthetas 79.5 2.7 9.3E-05 29.8 4.6 29 28-56 9-38 (88)
2 2kmm_A Guanosine-3',5'-BIS(dip 67.8 6.3 0.00022 26.5 3.9 26 31-56 3-28 (73)
3 3hvz_A Uncharacterized protein 50.1 18 0.0006 26.0 3.8 67 28-106 5-71 (78)
4 1r8o_A STI, kunitz trypsin inh 45.1 11 0.00037 28.2 2.1 19 88-106 6-25 (96)
5 1ryj_A Unknown; beta/alpha pro 43.4 23 0.00079 24.2 3.5 56 33-102 6-65 (70)
6 1tie_A Erythrina trypsin inhib 38.9 15 0.00052 30.0 2.2 19 88-106 6-24 (172)
7 3s8k_A Latex serine proteinase 38.1 15 0.00051 30.4 2.1 19 88-106 10-28 (184)
8 1r8n_A STI, kunitz trypsin inh 37.4 17 0.00057 30.2 2.3 19 88-106 10-28 (185)
9 3tc2_A Kunitz-type proteinase 36.7 16 0.00055 30.2 2.1 19 88-106 12-30 (187)
10 1avw_B STI, trypsin inhibitor; 36.4 16 0.00054 30.0 2.0 19 88-106 7-25 (177)
11 2dre_A Water-soluble chlorophy 36.3 17 0.00057 30.1 2.1 19 88-106 11-29 (180)
12 1eyl_A RWCI-3, chymotrypsin in 35.9 18 0.00061 30.0 2.3 19 88-106 11-29 (186)
13 3bx1_D BASI, alpha-amylase/sub 35.8 17 0.00057 30.0 2.1 19 88-106 10-28 (181)
14 3a8g_A NitrIle hydratase subun 32.4 34 0.0012 29.3 3.4 37 86-122 152-194 (207)
15 2qn4_A RASI, alpha-amylase/sub 30.4 23 0.0008 29.6 2.1 23 84-106 26-49 (200)
16 2gzb_A Kunitz-type proteinase 30.3 24 0.00083 28.7 2.1 19 88-106 9-28 (166)
17 3iir_A Trypsin inhibitor; beta 28.4 18 0.00063 30.0 1.1 18 88-105 7-24 (190)
18 3qyh_A CO-type nitrIle hydrata 28.4 33 0.0011 29.7 2.7 37 86-122 169-211 (226)
19 2zzd_C Thiocyanate hydrolase s 27.5 30 0.001 30.3 2.3 38 86-123 170-213 (243)
20 1f0z_A THis protein; ubiquitin 27.1 36 0.0012 22.7 2.2 23 34-56 3-25 (66)
21 3hht_A NitrIle hydratase alpha 26.1 38 0.0013 29.2 2.7 28 94-121 171-199 (216)
22 2k5p_A THis protein, thiamine- 25.5 44 0.0015 23.6 2.6 23 34-56 3-27 (78)
23 1wba_A Winged bean albumin 1; 25.0 29 0.00098 28.5 1.7 15 88-102 9-23 (175)
24 1tke_A Threonyl-tRNA synthetas 23.8 60 0.002 26.6 3.4 26 31-56 2-27 (224)
25 4an6_A Trypsin inhibitor; kuni 23.8 54 0.0018 26.8 3.1 16 91-106 12-27 (185)
26 3e8l_C Serine proteinase inhib 23.7 33 0.0011 28.5 1.8 18 89-106 21-38 (185)
27 1qv9_A F420-dependent methylen 22.8 82 0.0028 28.0 4.2 83 28-130 65-152 (283)
28 2cu3_A Unknown function protei 21.1 52 0.0018 21.8 2.1 22 34-56 2-23 (64)
29 2kl0_A Putative thiamin biosyn 20.7 54 0.0019 22.8 2.2 22 34-56 3-24 (73)
30 4fm4_A NitrIle hydratase alpha 20.7 51 0.0018 28.3 2.4 28 94-121 156-184 (209)
No 1
>1wwt_A Threonyl-tRNA synthetase, cytoplasmic; TGS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, ligase; NMR {Homo sapiens}
Probab=79.50 E-value=2.7 Score=29.79 Aligned_cols=29 Identities=14% Similarity=0.064 Sum_probs=25.4
Q ss_pred CCceEEEccCCcEEEecC-CccHHHHHHHH
Q 048756 28 HSTAKVLTLKGEVAEYKV-PVIVSQVLAHQ 56 (218)
Q Consensus 28 ~~taKVV~~DG~v~ef~~-PvtAseVL~~~ 56 (218)
...++|..+||++.+|.. ++++.|+..+.
T Consensus 9 ~~~i~I~lpdG~~~~~~~~~~T~~dia~~i 38 (88)
T 1wwt_A 9 SKPIKVTLPDGKQVDAESWKTTPYQIACGI 38 (88)
T ss_dssp CCEEEEECTTSCEEEEETTTCCHHHHHHHS
T ss_pred CCCEEEEECCCCEEEcccCCCCHHHHHHHh
Confidence 456888889999999997 99999998776
No 2
>2kmm_A Guanosine-3',5'-BIS(diphosphate) 3'- pyrophosphohydrolase; methods development, TGS domain, predominantly beta-sheet structure; NMR {Porphyromonas gingivalis}
Probab=67.82 E-value=6.3 Score=26.49 Aligned_cols=26 Identities=19% Similarity=0.135 Sum_probs=23.4
Q ss_pred eEEEccCCcEEEecCCccHHHHHHHH
Q 048756 31 AKVLTLKGEVAEYKVPVIVSQVLAHQ 56 (218)
Q Consensus 31 aKVV~~DG~v~ef~~PvtAseVL~~~ 56 (218)
++|..+||+..+|...+|+.|++.+.
T Consensus 3 i~i~~p~g~~~~~~~g~T~~dla~~i 28 (73)
T 2kmm_A 3 VMVFTPKGEIKRLPQGATALDFAYSL 28 (73)
T ss_dssp EEEECTTCCEEEECTTCBHHHHHHHH
T ss_pred EEEEcCCCCEEEcCCCCcHHHHHHHH
Confidence 67788899999999999999999876
No 3
>3hvz_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.20A {Clostridium leptum}
Probab=50.08 E-value=18 Score=25.96 Aligned_cols=67 Identities=19% Similarity=0.173 Sum_probs=40.3
Q ss_pred CCceEEEccCCcEEEecCCccHHHHHHHHHhhhcCcCCCCCeEEEccCCCCCCCCCCCCCCccccccCCeEEEecCCcc
Q 048756 28 HSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLPTSKL 106 (218)
Q Consensus 28 ~~taKVV~~DG~v~ef~~PvtAseVL~~~~~~~~~~~~~P~~FVC~SD~L~~~~~i~aL~~DeeLqpGqiYFlLP~s~l 106 (218)
...+.|..+||++.+|....|+.|+...-... -+-.++-+.- .. ..++.+.+|+-|.+-=++..+.+
T Consensus 5 ~~~i~v~tP~G~~~~lp~GaT~~D~A~~Ih~~-----lg~~~v~AkV-----NG--~~v~L~~~L~~gd~VeIit~~~~ 71 (78)
T 3hvz_A 5 PEEVFVFTPKGDVISLPIGSTVIDFAYAIHSA-----VGNRMIGAKV-----DG--RIVPIDYKVKTGEIIDVLTTKEL 71 (78)
T ss_dssp -CEEEEECTTSCEEEEETTCBHHHHHHHHCHH-----HHHTEEEEEE-----TT--EEECTTCBCCTTCBEEEEECC--
T ss_pred CceEEEECCCCCEEEecCCCCHHHHHHHhhhh-----hhcceEEEEE-----CC--EEcCCCcccCCCCEEEEEccCcc
Confidence 35799999999999999999999987654100 0012222221 12 22445777888866555554443
No 4
>1r8o_A STI, kunitz trypsin inhibitor; kunitz (STI) trypsin inhibitor, beta-trefoil fold, hydrolase inhibitor; 1.83A {Copaifera langsdorffii} SCOP: b.42.4.1
Probab=45.14 E-value=11 Score=28.24 Aligned_cols=19 Identities=16% Similarity=0.391 Sum_probs=16.1
Q ss_pred Ccccc-ccCCeEEEecCCcc
Q 048756 88 LEDEL-EADQIYFVLPTSKL 106 (218)
Q Consensus 88 ~DeeL-qpGqiYFlLP~s~l 106 (218)
.+++| ++|.-||++|..+-
T Consensus 6 ~G~~l~~~G~~YyI~p~~~g 25 (96)
T 1r8o_A 6 DGKPIENDGAEYYILPSVRG 25 (96)
T ss_dssp TSCCCBSSSSCEEEEESSSS
T ss_pred CCCEeeeCCCcEEEeeCccC
Confidence 46789 99999999998753
No 5
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=43.36 E-value=23 Score=24.20 Aligned_cols=56 Identities=16% Similarity=0.104 Sum_probs=34.2
Q ss_pred EEccCCcE----EEecCCccHHHHHHHHHhhhcCcCCCCCeEEEccCCCCCCCCCCCCCCccccccCCeEEEec
Q 048756 33 VLTLKGEV----AEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDLEDELEADQIYFVLP 102 (218)
Q Consensus 33 VV~~DG~v----~ef~~PvtAseVL~~~~~~~~~~~~~P~~FVC~SD~L~~~~~i~aL~~DeeLqpGqiYFlLP 102 (218)
-|..||+- .++....|+.+++.+..-. +..+++-- .. ..++.|+.|+.|--.-++|
T Consensus 6 ~i~vNg~~~~~~~~~~~~~tv~~Ll~~l~~~-------~~~v~vav-----N~--~~v~~~~~L~~gD~V~ii~ 65 (70)
T 1ryj_A 6 KFTVITDDGKKILESGAPRRIKDVLGELEIP-------IETVVVKK-----NG--QIVIDEEEIFDGDIIEVIR 65 (70)
T ss_dssp EEEEEETTEEEEEEESSCCBHHHHHHHTTCC-------TTTEEEEE-----TT--EECCTTSBCCTTCEEEEEE
T ss_pred EEEEeCccCceeEECCCCCcHHHHHHHhCCC-------CCCEEEEE-----CC--EECCCcccCCCCCEEEEEe
Confidence 46678887 8898889999999987211 33332211 11 1245677888885444443
No 6
>1tie_A Erythrina trypsin inhibitor; proteinase inhibitor (trypsin); 2.50A {Erythrina caffra} SCOP: b.42.4.1
Probab=38.85 E-value=15 Score=30.00 Aligned_cols=19 Identities=16% Similarity=0.340 Sum_probs=16.3
Q ss_pred CccccccCCeEEEecCCcc
Q 048756 88 LEDELEADQIYFVLPTSKL 106 (218)
Q Consensus 88 ~DeeLqpGqiYFlLP~s~l 106 (218)
.+++|++|.-||+||..+-
T Consensus 6 ~G~~l~~G~~YyI~p~~~g 24 (172)
T 1tie_A 6 NGEVVQNGGTYYLLPQVWA 24 (172)
T ss_dssp TSCBCCTTCEEEEEESSGG
T ss_pred CCCCCcCCCCEEEeECccC
Confidence 4688999999999998754
No 7
>3s8k_A Latex serine proteinase inhibitor; kunitz-STI fold, protease inhibitor, hydrolase inhibitor; HET: NAG FUC; 1.70A {Carica papaya} PDB: 3s8j_A*
Probab=38.06 E-value=15 Score=30.41 Aligned_cols=19 Identities=16% Similarity=-0.031 Sum_probs=16.5
Q ss_pred CccccccCCeEEEecCCcc
Q 048756 88 LEDELEADQIYFVLPTSKL 106 (218)
Q Consensus 88 ~DeeLqpGqiYFlLP~s~l 106 (218)
.+++|++|.-||++|..+-
T Consensus 10 ~G~~l~~g~~YyI~p~~~g 28 (184)
T 3s8k_A 10 DGKPVLYGVDYFVVSAIWG 28 (184)
T ss_dssp TSCBCBTTSCEEEEESSCG
T ss_pred CCCCCcCCCcEEEEEcccC
Confidence 4688999999999999864
No 8
>1r8n_A STI, kunitz trypsin inhibitor; kunitz-type trypsin/kallikrein inhibitor, beta-trefoil fold, flamboyant, hydrolase inhibitor; 1.75A {Delonix regia} SCOP: b.42.4.1
Probab=37.38 E-value=17 Score=30.18 Aligned_cols=19 Identities=5% Similarity=-0.034 Sum_probs=16.7
Q ss_pred CccccccCCeEEEecCCcc
Q 048756 88 LEDELEADQIYFVLPTSKL 106 (218)
Q Consensus 88 ~DeeLqpGqiYFlLP~s~l 106 (218)
.+++|++|.-||+||..+-
T Consensus 10 ~G~~l~~G~~YyI~p~~~g 28 (185)
T 1r8n_A 10 EGYPVFLGSEYYIVSAIIG 28 (185)
T ss_dssp TSCBCBTTSEEEEEECTTS
T ss_pred CCCCCcCCCCEEEEECccC
Confidence 5789999999999998764
No 9
>3tc2_A Kunitz-type proteinase inhibitor P1H5; beta-trefoil fold, protease inhibitor, hydrolase inhibitor; 1.60A {Solanum tuberosum}
Probab=36.65 E-value=16 Score=30.16 Aligned_cols=19 Identities=21% Similarity=0.143 Sum_probs=16.5
Q ss_pred CccccccCCeEEEecCCcc
Q 048756 88 LEDELEADQIYFVLPTSKL 106 (218)
Q Consensus 88 ~DeeLqpGqiYFlLP~s~l 106 (218)
.+++|++|.-||+||..+-
T Consensus 12 ~G~~l~~g~~YyI~p~~~g 30 (187)
T 3tc2_A 12 TGKELDPRLSYRIISTFWG 30 (187)
T ss_dssp TSCBCCTTSCEEEECSCCG
T ss_pred CCCCCcCCCCEEEEEcccC
Confidence 4688999999999999864
No 10
>1avw_B STI, trypsin inhibitor; complex (proteinase/inhibitor), porcine trypsin, soybean trypsin inhibitor, kunitz-type, beta-trefoil fold; 1.75A {Glycine max} SCOP: b.42.4.1 PDB: 1avx_B 1avu_A 1ba7_A
Probab=36.43 E-value=16 Score=29.99 Aligned_cols=19 Identities=21% Similarity=0.377 Sum_probs=16.4
Q ss_pred CccccccCCeEEEecCCcc
Q 048756 88 LEDELEADQIYFVLPTSKL 106 (218)
Q Consensus 88 ~DeeLqpGqiYFlLP~s~l 106 (218)
.+++|++|.-||+||..+-
T Consensus 7 ~G~~l~~G~~YyI~p~~~g 25 (177)
T 1avw_B 7 EGNPLENGGTYYILSDITA 25 (177)
T ss_dssp TSCBCBTTEEEEEEESSTT
T ss_pred CCCCCcCCCcEEEEeCccC
Confidence 5789999999999998754
No 11
>2dre_A Water-soluble chlorophyll protein; beta-trefoil, tetramer, plant, singlet oxygen, photooxidation, chlorophyll carrier; HET: CLA; 2.00A {Lepidium virginicum}
Probab=36.33 E-value=17 Score=30.06 Aligned_cols=19 Identities=26% Similarity=0.471 Sum_probs=16.7
Q ss_pred CccccccCCeEEEecCCcc
Q 048756 88 LEDELEADQIYFVLPTSKL 106 (218)
Q Consensus 88 ~DeeLqpGqiYFlLP~s~l 106 (218)
.+++|++|.-||+||..+-
T Consensus 11 ~G~~l~~G~~YyI~p~~~g 29 (180)
T 2dre_A 11 NGNPLKIETRYFIQPASDN 29 (180)
T ss_dssp TSCBCBTTCCEEEEESSCS
T ss_pred CCCCCcCCCCEEEEeCccC
Confidence 5789999999999998764
No 12
>1eyl_A RWCI-3, chymotrypsin inhibitor; beta trefoil, hydrolase inhibitor; HET: SO4; 1.90A {Psophocarpus tetragonolobus} SCOP: b.42.4.1 PDB: 1fn0_A* 2beb_A 2esu_A 1fmz_A* 2bea_A 2et2_A 4wbc_A* 1wbc_A 2wbc_A* 1xg6_A 2qyi_B 3i29_B 3i2x_A 3i2a_A 3qyd_A
Probab=35.93 E-value=18 Score=30.01 Aligned_cols=19 Identities=21% Similarity=0.333 Sum_probs=16.6
Q ss_pred CccccccCCeEEEecCCcc
Q 048756 88 LEDELEADQIYFVLPTSKL 106 (218)
Q Consensus 88 ~DeeLqpGqiYFlLP~s~l 106 (218)
.+++|++|.-||+||..+-
T Consensus 11 ~G~~l~~G~~YYI~p~~~g 29 (186)
T 1eyl_A 11 EGNLVENGGTYYLLPHIWA 29 (186)
T ss_dssp TSSBCBTTCEEEEEESSGG
T ss_pred CCCCCcCCCCEEEeecccC
Confidence 5789999999999998763
No 13
>3bx1_D BASI, alpha-amylase/subtilisin inhibitor; complex (proteinase/inhibitor) enzyme inhibition, savinase, barley alpha-amylase/subtilisin inhibitor; 1.85A {Hordeum vulgare} SCOP: b.42.4.1 PDB: 1ava_C 2iwt_B*
Probab=35.83 E-value=17 Score=29.97 Aligned_cols=19 Identities=37% Similarity=0.552 Sum_probs=16.5
Q ss_pred CccccccCCeEEEecCCcc
Q 048756 88 LEDELEADQIYFVLPTSKL 106 (218)
Q Consensus 88 ~DeeLqpGqiYFlLP~s~l 106 (218)
.+++|++|.-||+||..+-
T Consensus 10 ~G~~l~~G~~YyI~p~~~g 28 (181)
T 3bx1_D 10 DGHELRADANYYVLSANRA 28 (181)
T ss_dssp TSCBCBTTSCEEEEESSGG
T ss_pred CCCCCcCCCCEEEEecccC
Confidence 5789999999999998753
No 14
>3a8g_A NitrIle hydratase subunit alpha; Fe, iron, lyase, metal-binding, oxidation; 1.11A {Rhodococcus erythropolis} PDB: 3a8h_A 3a8l_A 3a8o_A 2zpb_A 2ahj_A 2cyz_A 2cz6_A 2cz7_A 2d0q_A 2cz1_A 2zpe_A 2zpf_A 2zpg_A 2zph_A 2zpi_A 2qdy_A 3a8m_A 2zcf_A 1ahj_A 2cz0_A*
Probab=32.44 E-value=34 Score=29.34 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=27.6
Q ss_pred CCCccccc-----cCCeEEEecCCccCC-CCCHHHHHHHHHHH
Q 048756 86 LDLEDELE-----ADQIYFVLPTSKLQY-KLSASDMAALAVKA 122 (218)
Q Consensus 86 L~~DeeLq-----pGqiYFlLP~s~l~~-~LSa~dmAaLAvkA 122 (218)
|++|-+++ +...|+|||+..-.. .||.+++++|.-+-
T Consensus 152 lP~~v~VrV~dstae~rYlVLP~rPagte~lseeqLa~lvtrd 194 (207)
T 3a8g_A 152 IASDIEIRVYDTTAETRYMVLPQRPAGTEGWSQEQLQEIVTKD 194 (207)
T ss_dssp CCTTSEEEEEECCSSEEEEEECCCCTTCTTCCHHHHHHHCCHH
T ss_pred CCCCeEEEEEeCCCCeEEEEecCCCCCCCCCCHHHHHHHhccc
Confidence 44555443 678999999987653 49999999987654
No 15
>2qn4_A RASI, alpha-amylase/subtilisin inhibitor; amylase inhibitor, alpha- amylase inhibitor, protease inhibitor, serine protease inhibitor; 1.80A {Oryza sativa subsp}
Probab=30.40 E-value=23 Score=29.60 Aligned_cols=23 Identities=43% Similarity=0.613 Sum_probs=18.6
Q ss_pred CCC-CCccccccCCeEEEecCCcc
Q 048756 84 PAL-DLEDELEADQIYFVLPTSKL 106 (218)
Q Consensus 84 ~aL-~~DeeLqpGqiYFlLP~s~l 106 (218)
+.| -.+++|++|.-||++|..+.
T Consensus 26 pVlD~~G~~l~~G~~YyI~p~~~g 49 (200)
T 2qn4_A 26 PVYDTEGHELSADGSYYVLPASPG 49 (200)
T ss_dssp BCBCTTSCBCBTTSCEEEEESSTT
T ss_pred ceEeCCCCCCcCCCcEEEEeCccC
Confidence 345 36789999999999998764
No 16
>2gzb_A Kunitz-type proteinase inhibitor BBCI; cruzipain, cysteine proteinase inhibitor, hydrolase; 1.70A {Bauhinia bauhinioides} PDB: 2go2_A
Probab=30.30 E-value=24 Score=28.72 Aligned_cols=19 Identities=16% Similarity=0.410 Sum_probs=16.6
Q ss_pred Ccccccc-CCeEEEecCCcc
Q 048756 88 LEDELEA-DQIYFVLPTSKL 106 (218)
Q Consensus 88 ~DeeLqp-GqiYFlLP~s~l 106 (218)
.+++|++ |.-||++|..+-
T Consensus 9 ~G~~l~~~g~~YyI~p~~~g 28 (166)
T 2gzb_A 9 KGEPVSNAADAYYLVPVSHG 28 (166)
T ss_dssp TSCBCBBSCSCEEEEESSSC
T ss_pred CCCEeecCCCCEEEEeCccC
Confidence 5789999 999999998754
No 17
>3iir_A Trypsin inhibitor; beta-trefoil fold, hydrolase inhib; 2.90A {Murraya koenigii} SCOP: b.42.4.0
Probab=28.37 E-value=18 Score=30.00 Aligned_cols=18 Identities=17% Similarity=0.307 Sum_probs=15.8
Q ss_pred CccccccCCeEEEecCCc
Q 048756 88 LEDELEADQIYFVLPTSK 105 (218)
Q Consensus 88 ~DeeLqpGqiYFlLP~s~ 105 (218)
.+++|++|.-||+||..+
T Consensus 7 ~G~~l~~g~~YyI~p~~~ 24 (190)
T 3iir_A 7 NGNVVEASRDYYLVSVIG 24 (190)
T ss_dssp TSCBCBTTSCBEEEEEEE
T ss_pred CCCCCcCCCCEEEEECcc
Confidence 467899999999999875
No 18
>3qyh_A CO-type nitrIle hydratase alpha subunit; cobalt, cysteine sulfinic acid, lyase; 2.00A {Pseudomonas putida} PDB: 3qyg_A 3qxe_A 3qz9_A 3qz5_A
Probab=28.35 E-value=33 Score=29.74 Aligned_cols=37 Identities=24% Similarity=0.399 Sum_probs=27.6
Q ss_pred CCCccccc-----cCCeEEEecCCccCC-CCCHHHHHHHHHHH
Q 048756 86 LDLEDELE-----ADQIYFVLPTSKLQY-KLSASDMAALAVKA 122 (218)
Q Consensus 86 L~~DeeLq-----pGqiYFlLP~s~l~~-~LSa~dmAaLAvkA 122 (218)
|++|-+.+ +...|||||+..-.. .||.++|++|.-+-
T Consensus 169 lP~~v~VrV~Dstae~rYlVLP~RP~gte~lseeqLa~lVTrd 211 (226)
T 3qyh_A 169 IPANKEIRVWDTTAELRYMVLPERPAGTEAYSEEQLAELVTRD 211 (226)
T ss_dssp CCTTSEEEEEECCSSCEEEEECCCCSSCTTCCHHHHHTTCCHH
T ss_pred CCCCeEEEEEeCCCCeEEEEecCCCCCCCCCCHHHHHHHhccc
Confidence 44555443 578999999987754 49999999987653
No 19
>2zzd_C Thiocyanate hydrolase subunit gamma; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dxc_C* 2dxb_C 2dd5_C* 2dd4_C*
Probab=27.48 E-value=30 Score=30.32 Aligned_cols=38 Identities=16% Similarity=0.287 Sum_probs=28.4
Q ss_pred CCCccccc-----cCCeEEEecCCccCC-CCCHHHHHHHHHHHH
Q 048756 86 LDLEDELE-----ADQIYFVLPTSKLQY-KLSASDMAALAVKAS 123 (218)
Q Consensus 86 L~~DeeLq-----pGqiYFlLP~s~l~~-~LSa~dmAaLAvkAs 123 (218)
|++|-+++ +...|||||+..-.. .||.++|++|+-+-+
T Consensus 170 lP~dveVrV~Dstae~rYlVLP~RPaGteglsEeqLa~lvTrds 213 (243)
T 2zzd_C 170 LPSEVQIRVADSNQKTRYIVMPVRPEGTDGWTEDQLAEIVTRDC 213 (243)
T ss_dssp CCTTSEEEEEECCSSEEEEEECCCCSSCTTCCHHHHHHTCCHHH
T ss_pred CCCCeEEEEEecCCCeEEEEecCCCCCCCCCCHHHHHHHhcccc
Confidence 44555443 568899999987754 499999999987643
No 20
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=27.09 E-value=36 Score=22.74 Aligned_cols=23 Identities=9% Similarity=0.190 Sum_probs=21.1
Q ss_pred EccCCcEEEecCCccHHHHHHHH
Q 048756 34 LTLKGEVAEYKVPVIVSQVLAHQ 56 (218)
Q Consensus 34 V~~DG~v~ef~~PvtAseVL~~~ 56 (218)
|..||+-.++....|+.+++.+.
T Consensus 3 i~vNg~~~~~~~~~tv~~ll~~l 25 (66)
T 1f0z_A 3 ILFNDQAMQCAAGQTVHELLEQL 25 (66)
T ss_dssp EEESSCEECCCTTCCHHHHHHHH
T ss_pred EEECCEEEEcCCCCcHHHHHHHc
Confidence 57799999999999999999987
No 21
>3hht_A NitrIle hydratase alpha subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} SCOP: d.149.1.1 PDB: 2dpp_A 1v29_A
Probab=26.09 E-value=38 Score=29.18 Aligned_cols=28 Identities=18% Similarity=0.387 Sum_probs=22.4
Q ss_pred cCCeEEEecCCccCC-CCCHHHHHHHHHH
Q 048756 94 ADQIYFVLPTSKLQY-KLSASDMAALAVK 121 (218)
Q Consensus 94 pGqiYFlLP~s~l~~-~LSa~dmAaLAvk 121 (218)
+...|||||+..-.. .||.++|++|.-+
T Consensus 171 ae~rylVLP~RP~gte~lseeqLa~lVTr 199 (216)
T 3hht_A 171 SEIRFMVLPQRPEGTEGMTEEELAKLVTR 199 (216)
T ss_dssp SSCEEEEECCCCTTCTTCCHHHHHTTCCT
T ss_pred CceEEEEecCCCCCCCCCCHHHHHHhhcc
Confidence 578899999987754 4999999987543
No 22
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=25.54 E-value=44 Score=23.59 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=20.8
Q ss_pred EccCCcEEEec--CCccHHHHHHHH
Q 048756 34 LTLKGEVAEYK--VPVIVSQVLAHQ 56 (218)
Q Consensus 34 V~~DG~v~ef~--~PvtAseVL~~~ 56 (218)
|..||+-.++. .+.|+.|+|.+.
T Consensus 3 I~vNGe~~e~~~~~~~Tl~~LL~~l 27 (78)
T 2k5p_A 3 LTVNGKPSTVDGAESLNVTELLSAL 27 (78)
T ss_dssp EEETTEEEECSSCSCEEHHHHHHHH
T ss_pred EEECCEEEEcCCCCCCcHHHHHHHc
Confidence 67899999999 779999999988
No 23
>1wba_A Winged bean albumin 1; SEED storage protein; 1.80A {Psophocarpus tetragonolobus} SCOP: b.42.4.1
Probab=24.96 E-value=29 Score=28.52 Aligned_cols=15 Identities=13% Similarity=0.204 Sum_probs=13.9
Q ss_pred CccccccCCeEEEec
Q 048756 88 LEDELEADQIYFVLP 102 (218)
Q Consensus 88 ~DeeLqpGqiYFlLP 102 (218)
.+++|++|.-||+||
T Consensus 9 ~G~~l~~g~~YyI~p 23 (175)
T 1wba_A 9 EGNKLVNRGKYTIVS 23 (175)
T ss_dssp TSCBCBTTEEEEEEE
T ss_pred CCCCCcCCCcEEEee
Confidence 578999999999999
No 24
>1tke_A Threonyl-tRNA synthetase; ligase; 1.46A {Escherichia coli} SCOP: d.15.10.1 d.67.1.1 PDB: 1tje_A 1tkg_A* 1tky_A*
Probab=23.84 E-value=60 Score=26.60 Aligned_cols=26 Identities=15% Similarity=0.102 Sum_probs=23.0
Q ss_pred eEEEccCCcEEEecCCccHHHHHHHH
Q 048756 31 AKVLTLKGEVAEYKVPVIVSQVLAHQ 56 (218)
Q Consensus 31 aKVV~~DG~v~ef~~PvtAseVL~~~ 56 (218)
++|..+||++.+|...+|+.|+..+.
T Consensus 2 i~I~~p~G~~~~~~~g~T~~dia~~i 27 (224)
T 1tke_A 2 PVITLPDGSQRHYDHAVSPMDVALDI 27 (224)
T ss_dssp CEEECTTSCEEECSSCBCHHHHHHHH
T ss_pred eEEEeCCCCEEEecCCCCHHHHHHHH
Confidence 57888999999999999999998765
No 25
>4an6_A Trypsin inhibitor; kunitz type inhibitor, factor XA inhibitor, hydrolase inhibi; 1.94A {Tamarindus indica} PDB: 4an7_B
Probab=23.82 E-value=54 Score=26.83 Aligned_cols=16 Identities=25% Similarity=0.519 Sum_probs=13.5
Q ss_pred ccccCCeEEEecCCcc
Q 048756 91 ELEADQIYFVLPTSKL 106 (218)
Q Consensus 91 eLqpGqiYFlLP~s~l 106 (218)
.|++|.-||+||..+-
T Consensus 12 vl~~g~~YYIlP~~~g 27 (185)
T 4an6_A 12 VLNNAGQYYILPAKQG 27 (185)
T ss_dssp CBSSSSEEEEEESSCC
T ss_pred eecCCCCEEEEECccC
Confidence 3899999999998653
No 26
>3e8l_C Serine proteinase inhibitor A; beta-trefoil fold, protease inhibitor, complex, DIG hydrolase, metal-binding, protease, secreted; 2.48A {Sagittaria sagittifolia}
Probab=23.74 E-value=33 Score=28.50 Aligned_cols=18 Identities=6% Similarity=-0.116 Sum_probs=15.9
Q ss_pred ccccccCCeEEEecCCcc
Q 048756 89 EDELEADQIYFVLPTSKL 106 (218)
Q Consensus 89 DeeLqpGqiYFlLP~s~l 106 (218)
.++|+.|.-||+||..+-
T Consensus 21 ~~~~~nG~~YYIlPai~g 38 (185)
T 3e8l_C 21 LNLGGNYPLYTIQSAAIG 38 (185)
T ss_dssp CCCSSSCCCEEEEECCTT
T ss_pred ccccCCCCcEEEEEeecC
Confidence 577999999999999874
No 27
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=22.80 E-value=82 Score=28.04 Aligned_cols=83 Identities=17% Similarity=0.183 Sum_probs=54.3
Q ss_pred CCceEEEccCCcEEEecCCccHHHHHHHHHhhhcCcCCCCCeEEEccCCCCCCCCCCCCCCcccc-ccCCeEEEecCCcc
Q 048756 28 HSTAKVLTLKGEVAEYKVPVIVSQVLAHQLAAQADQEEAPSWFLCSSDSLLFDDYIPALDLEDEL-EADQIYFVLPTSKL 106 (218)
Q Consensus 28 ~~taKVV~~DG~v~ef~~PvtAseVL~~~~~~~~~~~~~P~~FVC~SD~L~~~~~i~aL~~DeeL-qpGqiYFlLP~s~l 106 (218)
+..+-||.+|+. ...|..|.|+|.+.. =|--+|.+. |.....++| +-|.=|+++|.+..
T Consensus 65 pDfvI~isPN~a---~PGP~~ARE~l~~~~--------iP~IvI~D~---------p~~K~kd~l~~~g~GYIivk~DpM 124 (283)
T 1qv9_A 65 PDFIVYGGPNPA---APGPSKAREMLADSE--------YPAVIIGDA---------PGLKVKDEMEEQGLGYILVKPDAM 124 (283)
T ss_dssp CSEEEEECSCTT---SHHHHHHHHHHHTSS--------SCEEEEEEG---------GGGGGHHHHHHTTCEEEEETTSCC
T ss_pred CCEEEEECCCCC---CCCchHHHHHHHhCC--------CCEEEEcCC---------cchhhHHHHHhcCCcEEEEecCcc
Confidence 456777777775 367888999996551 054444322 223333444 56788999998764
Q ss_pred ----CCCCCHHHHHHHHHHHHHHHHhcc
Q 048756 107 ----QYKLSASDMAALAVKASLALQNAS 130 (218)
Q Consensus 107 ----~~~LSa~dmAaLAvkAssAL~~~~ 130 (218)
+.-|.+.|||.+..-+-..|..++
T Consensus 125 IGArREFLDP~EMa~fNaDv~kVLa~tG 152 (283)
T 1qv9_A 125 LGARREFLDPVEMAIYNADLMKVLAATG 152 (283)
T ss_dssp CCCCTTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred ccchhhccCHHHHHHhhhhHHHHHHhhh
Confidence 233999999999887776666554
No 28
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=21.07 E-value=52 Score=21.82 Aligned_cols=22 Identities=23% Similarity=0.229 Sum_probs=19.8
Q ss_pred EccCCcEEEecCCccHHHHHHHH
Q 048756 34 LTLKGEVAEYKVPVIVSQVLAHQ 56 (218)
Q Consensus 34 V~~DG~v~ef~~PvtAseVL~~~ 56 (218)
|..||+-.++ ...|+.++|...
T Consensus 2 i~vNg~~~~~-~~~tv~~ll~~l 23 (64)
T 2cu3_A 2 VWLNGEPRPL-EGKTLKEVLEEM 23 (64)
T ss_dssp EEETTEEECC-TTCCHHHHHHHH
T ss_pred EEECCEEEEc-CCCcHHHHHHHc
Confidence 5679999999 889999999987
No 29
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=20.68 E-value=54 Score=22.79 Aligned_cols=22 Identities=23% Similarity=0.365 Sum_probs=19.9
Q ss_pred EccCCcEEEecCCccHHHHHHHH
Q 048756 34 LTLKGEVAEYKVPVIVSQVLAHQ 56 (218)
Q Consensus 34 V~~DG~v~ef~~PvtAseVL~~~ 56 (218)
|..||+-.++ ...|++|+|.+.
T Consensus 3 I~vNG~~~e~-~~~Tl~~LL~~l 24 (73)
T 2kl0_A 3 VTINGEQREV-QSASVAALMTEL 24 (73)
T ss_dssp EEETTEEECC-CCSBHHHHHHHT
T ss_pred EEECCEEEEc-CCCcHHHHHHHc
Confidence 5679999999 889999999987
No 30
>4fm4_A NitrIle hydratase alpha subunit; iron type hydratase, hydrolysis, sulfinic acid, lyase; 2.38A {Comamonas testosteroni}
Probab=20.65 E-value=51 Score=28.27 Aligned_cols=28 Identities=32% Similarity=0.450 Sum_probs=22.9
Q ss_pred cCCeEEEecCCccCCC-CCHHHHHHHHHH
Q 048756 94 ADQIYFVLPTSKLQYK-LSASDMAALAVK 121 (218)
Q Consensus 94 pGqiYFlLP~s~l~~~-LSa~dmAaLAvk 121 (218)
+...|||||+..-... +|.+++++|.-+
T Consensus 156 ae~rYlVLP~rPagte~~see~La~lVtr 184 (209)
T 4fm4_A 156 ADTRYMVLPLRPQGTEDWSEAQLATLITQ 184 (209)
T ss_dssp SSEEEEEECCCCTTCTTCCHHHHHTTCCH
T ss_pred CCeEEEEeCCCCCCcCCCCHHHHHHHhhh
Confidence 5678999999887644 999999998654
Done!