Your job contains 1 sequence.
>048757
LLGSSPCLWSSLDLRPYKFDTSAAESLSSRCTNLQALWFRGALSADAMIILQARRLREIN
VEFCRELTDAIFSAIVARHEMLEILHFGLDVCDRISSDAIKTVAYCCPKLRRLWLSGVRE
VNGDAINALAKQCRQLVEVGFIDSGGVDEAALENLSSVRYLSIAGTRNLNWSSAAIAWSK
LTSLVGLDTSRTNINLSSVTRLLSSSRNLKVLIALNCPVFEAEADTSMMYNQKGKVVLSL
ISEIFKGVASLFSDTTEINNGAFQNWRKLKVRDRISDEIVSWIERVLSHSLMRISKKNPK
EFDDFWLRQGATLLLSLMESSQQEVQERAAYAVATFVVIDDQNAMVDCQRAEAILRHGGV
RLLLDLARSPPEGLQSEVAKAIANLSVDSKVAKAVSENGGIDILADLARSTNRLVAEEVV
GGLWNLSVGEDHKGAIARAGGIKALVDLIFKWSSWNDGVLERAAGALANLAADDKCSLEV
ARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTF
SKHEGVRQEAAGALWNLSFDDRNREAIAAAGGVEALVALVRSCSSSSQGLQERAAGALWG
LSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQA
LIHLCSSSLSKMARFMAALALAYIVDGRMEDIASIGSSLEGTSESENLDVIRRMALKHIE
DFCAGRIALKHIEDFVRSFSDPQAFATALASAVPKSLAQITEGARIPEAAHLRCSGAEIG
RFVSMLRNPSSILKACAAVALLQFTMPGGQHSMHHTNLLQNVGAPRVLQSTAAAAIAPVE
AKIFAKIVLRNLEHHQNQHVEASI
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048757
(864 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2055033 - symbol:ARABIDILLO-1 "AT2G44900" spec... 2487 2.1e-258 1
TAIR|locus:2103351 - symbol:ARABIDILLO-2 "AT3G60350" spec... 2383 2.2e-247 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 207 7.1e-13 1
ASPGD|ASPL0000008980 - symbol:AN12408 species:162425 "Eme... 177 7.1e-10 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 168 1.8e-08 2
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 162 3.7e-08 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 161 5.3e-08 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 166 8.4e-08 2
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 158 9.0e-08 1
TAIR|locus:2150295 - symbol:ARIA "ARM repeat protein inte... 162 1.2e-07 2
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 155 2.0e-07 1
DICTYBASE|DDB_G0288877 - symbol:aarA "beta-catenin relate... 166 2.9e-07 2
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 151 3.4e-07 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 149 8.6e-07 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 151 9.3e-07 2
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 142 2.0e-06 2
TAIR|locus:1006230171 - symbol:AT2G14635 "AT2G14635" spec... 121 2.1e-06 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 145 2.8e-06 1
CGD|CAL0001835 - symbol:VAC8 species:5476 "Candida albica... 144 2.8e-06 1
UNIPROTKB|Q59MN0 - symbol:VAC8 "Vacuolar protein 8" speci... 144 2.8e-06 1
TAIR|locus:2025222 - symbol:SKP2B "AT1G77000" species:370... 139 4.2e-06 1
SGD|S000000739 - symbol:VAC8 "Phosphorylated and palmitoy... 141 5.8e-06 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 135 1.1e-05 1
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 146 1.6e-05 2
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 138 1.8e-05 1
TAIR|locus:2027082 - symbol:SKP2A species:3702 "Arabidops... 131 3.2e-05 1
TAIR|locus:2166978 - symbol:AT5G23340 species:3702 "Arabi... 131 4.0e-05 1
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 127 8.1e-05 2
MGI|MGI:1918132 - symbol:Armc3 "armadillo repeat containi... 129 0.00020 1
TAIR|locus:2157358 - symbol:AT5G50900 species:3702 "Arabi... 126 0.00023 1
POMBASE|SPBC354.14c - symbol:vac8 "vacuolar protein Vac8 ... 125 0.00029 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 122 0.00031 1
TAIR|locus:2179842 - symbol:ABAP1 "ARMADILLO BTB protein ... 132 0.00034 2
TAIR|locus:2056529 - symbol:AT2G05810 "AT2G05810" species... 124 0.00040 1
TAIR|locus:2201205 - symbol:AT1G23180 "AT1G23180" species... 90 0.00051 3
RGD|620734 - symbol:Ctnnd2 "catenin (cadherin-associated ... 117 0.00058 1
RGD|1305813 - symbol:Fbxl7 "F-box and leucine-rich repeat... 121 0.00058 1
MGI|MGI:3052506 - symbol:Fbxl7 "F-box and leucine-rich re... 121 0.00067 1
UNIPROTKB|F1NF36 - symbol:FBXL15 "Uncharacterized protein... 117 0.00076 1
MGI|MGI:1354704 - symbol:Fbxl17 "F-box and leucine-rich r... 122 0.00086 1
>TAIR|locus:2055033 [details] [associations]
symbol:ARABIDILLO-1 "AT2G44900" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0048527
"lateral root development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR001810
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181
SMART:SM00185 SMART:SM00256 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0048527 EMBL:AC002388 IPI:IPI00521082
PIR:T00403 RefSeq:NP_566029.1 UniGene:At.53128 HSSP:Q02248
ProteinModelPortal:O22161 SMR:O22161 PaxDb:O22161 PRIDE:O22161
EnsemblPlants:AT2G44900.1 GeneID:819099 KEGG:ath:AT2G44900
TAIR:At2g44900 eggNOG:NOG48141 HOGENOM:HOG000029512
InParanoid:O22161 OMA:MDDESAN PhylomeDB:O22161
ProtClustDB:CLSN2685043 Genevestigator:O22161 Uniprot:O22161
Length = 930
Score = 2487 (880.5 bits), Expect = 2.1e-258, P = 2.1e-258
Identities = 511/868 (58%), Positives = 620/868 (71%)
Query: 2 LGSSPCLWSSLDLRPYKFDTSAAESLSSRCTNLQALWFRGALSADAMIILQARRLREINV 61
LG+S CLW+SLDLRP+KFD S A SL+SRC NL L FRG SAD++I L+AR L E++
Sbjct: 80 LGASSCLWTSLDLRPHKFDASMAASLASRCVNLHYLRFRGVESADSLIHLKARNLIEVSG 139
Query: 62 EFCRELTDAIFSAIVARHEMLEILHFGLDVCDRISSDAIKTVAYCCPKLRRLWLSGVREV 121
++C+++TDA S IVARHE LE L G D C+RI+SDAIK VA+CCPKL++L LSG+R+V
Sbjct: 140 DYCKKITDATLSMIVARHEALESLQLGPDFCERITSDAIKAVAFCCPKLKKLRLSGIRDV 199
Query: 122 NGDAINALAKQCRQLVEVGFIDSGGVDEAALENLSSVRYLSIAGTRNLNWSSAAIAWSKL 181
+AI ALAK C QL ++GF+D +DE AL + SVRYLS+AGT N+ WS A+ W KL
Sbjct: 200 TSEAIEALAKHCPQLNDLGFLDCLNIDEEALGKVVSVRYLSVAGTSNIKWSIASNNWDKL 259
Query: 182 TSLVGLDTSRTNIXXXXXXXXXXXXXXXKVLIALNCPVFEAEADTSMMYNQ-KGKVVLSL 240
L GLD SRT+I KVL ALNC V E E ++ + YN+ KGKV+L+L
Sbjct: 260 PKLTGLDVSRTDIGPTAVSRFLTSSQSLKVLCALNCHVLE-EDESLISYNRFKGKVLLAL 318
Query: 241 ISEIFKGVASLFSDTTEINNGAFQNWRKLK--VRDRISDEIVSWIERVLSHSLMRISKKN 298
+ +F G+AS+F+D T+ F WR+L +D+ ++ + WIE ++SH+L+R ++ N
Sbjct: 319 FTNVFDGLASIFADNTKKPKDIFAYWRELMKTTKDKTINDFIHWIEWIISHTLLRTAECN 378
Query: 299 PKEFDDFWLRQGATXXXXXXXXXXXXXXXRAAYAVATFVVIDDQNAMVDCQRAEAILRHG 358
P+ DDFWL +GA R+A +ATFVV+DD+NA +DC RAEA+++ G
Sbjct: 379 PEGLDDFWLNEGAALLLNLMQSSQEDVQERSATGLATFVVVDDENASIDCGRAEAVMKDG 438
Query: 359 GVRLLLDLARSPPEGLQSEVAKAIANLSVDSKVAKAVSENGGIDILADLARSTNRLVAEE 418
G+RLLL+LA+S EGLQSE AKAIANLSV++ +AK+V+E GGI ILA LA+S NRLVAEE
Sbjct: 439 GIRLLLELAKSWREGLQSEAAKAIANLSVNANIAKSVAEEGGIKILAGLAKSMNRLVAEE 498
Query: 419 VVGGLWNLSVGEDHXXXXXXXXXXXXLVDLIFKWSSWNDGVLERXXXXXXXXXXDDKCSL 478
GGLWNLSVGE+H LVDLIF+W + DGVLER DDKCS+
Sbjct: 499 AAGGLWNLSVGEEHKNAIAQAGGVKALVDLIFRWPNGCDGVLERAAGALANLAADDKCSM 558
Query: 479 EVARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQL 538
EVA+AGGVHALVMLAR+ +EGVQEQAARALANL AHGDSN+NNAAVG E GALEALVQL
Sbjct: 559 EVAKAGGVHALVMLARNCKYEGVQEQAARALANLAAHGDSNNNNAAVGQEAGALEALVQL 618
Query: 539 TFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGAL 598
T S HEGVRQEAAGALWNLSFDD+NR +SCS++S GLQERAAGAL
Sbjct: 619 TKSPHEGVRQEAAGALWNLSFDDKNRESISVAGGVEALVALAQSCSNASTGLQERAAGAL 678
Query: 599 WGLSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGV 658
WGLS+SEANS+AIGREGGV PLIALARS DVHETAAGALWNLAFNPGNAL IVE GGV
Sbjct: 679 WGLSVSEANSVAIGREGGVPPLIALARSEAEDVHETAAGALWNLAFNPGNALRIVEEGGV 738
Query: 659 QALIHLCSSSLSKMARFMAALALAYIVDGRMEDIA-SIG-SSLEGTSESENLDVIRRMAL 716
AL+HLCSSS+SKMARFMAALALAY+ DGRM++ A IG SS E TS++ +LD R MAL
Sbjct: 739 PALVHLCSSSVSKMARFMAALALAYMFDGRMDEYALMIGTSSSESTSKNISLDGARNMAL 798
Query: 717 KHIEDFCAGRIALKHIEDFVRSFSDPQAFATALASAVPKSLAQITEGARIPEAAHLRCSG 776
KHIE F V SF DP F + + S+ P LAQ+TE ARI EA HLRCSG
Sbjct: 799 KHIEAF-------------VLSFIDPHIFESPVVSSTPTMLAQVTERARIQEAGHLRCSG 845
Query: 777 AEIGRFVSMLRNPSSILKACAAVALLQFTMPGGQHSMHHTNLLQNVGAPRVLQSTXXXXX 836
AEIGRFV+MLRNP S LKACAA ALLQFT+PGG+H+MHH +L+QN G R L+S
Sbjct: 846 AEIGRFVTMLRNPDSTLKACAAFALLQFTIPGGRHAMHHVSLMQNGGESRFLRSAAASAK 905
Query: 837 XXXXXXXXXKIVLRNLEHHQNQHVEASI 864
KI+LRNLEHHQ E+SI
Sbjct: 906 TPREAKIFTKILLRNLEHHQ---AESSI 930
>TAIR|locus:2103351 [details] [associations]
symbol:ARABIDILLO-2 "AT3G60350" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048527 "lateral root development" evidence=IGI;IMP]
InterPro:IPR000225 InterPro:IPR001810 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181 SMART:SM00185
SMART:SM00256 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048527
HSSP:Q02248 eggNOG:NOG48141 HOGENOM:HOG000029512
ProtClustDB:CLSN2685043 EMBL:AL138646 IPI:IPI00537320 PIR:T47846
RefSeq:NP_191594.1 UniGene:At.48788 UniGene:At.63623
ProteinModelPortal:Q9M224 SMR:Q9M224 PRIDE:Q9M224
EnsemblPlants:AT3G60350.1 GeneID:825206 KEGG:ath:AT3G60350
TAIR:At3g60350 InParanoid:Q9M224 OMA:RTTIDHI PhylomeDB:Q9M224
Genevestigator:Q9M224 Uniprot:Q9M224
Length = 928
Score = 2383 (843.9 bits), Expect = 2.2e-247, P = 2.2e-247
Identities = 488/862 (56%), Positives = 603/862 (69%)
Query: 2 LGSSPCLWSSLDLRPYKFDTSAAESLSSRCTNLQALWFRGALSADAMIILQARRLREINV 61
LG+S LWSSLDLR +KFD S A SL++RC +LQ + FRG SADA+I L+AR L EI+
Sbjct: 73 LGASSFLWSSLDLRAHKFDLSMAASLATRCVDLQKIRFRGVDSADAIIHLKARSLLEISG 132
Query: 62 EFCRELTDAIFSAIVARHEMLEILHFGLDVCDRISSDAIKTVAYCCPKLRRLWLSGVREV 121
++CR++TDA S I ARHE LE L G D C+RI+SDAI+ +A+CCPKL++L +SG+R+V
Sbjct: 133 DYCRKITDATLSMIAARHEALESLQLGPDFCERITSDAIRVIAFCCPKLKKLRVSGMRDV 192
Query: 122 NGDAINALAKQCRQLVEVGFIDSGGVDEAALENLSSVRYLSIAGTRNLNWSSAAIAWSKL 181
+ +AI +LAK C QL ++GF+D ++E AL + S+RYLS+AGT N+ W A W KL
Sbjct: 193 SSEAIESLAKHCPQLSDLGFLDCLNINEEALGKVVSLRYLSVAGTSNIKWKVALENWEKL 252
Query: 182 TSLVGLDTSRTNIXXXXXXXXXXXXXXXKVLIALNCPVFEAEADTSMMYNQ-KGKVVLSL 240
L+GLD SRT I KVL ALNCP E D S N+ KGKV+L++
Sbjct: 253 PKLIGLDVSRTTIDHIAVSRLLKSSQSLKVLCALNCPYLEE--DKSYSSNRFKGKVLLAV 310
Query: 241 ISEIFKGVASLFSDTTEINNGAFQNWRKLKVRDRISDEIVSWIERVLSHSLMRISKK-NP 299
++ F +AS+F+D ++ F WR L +D+ DEI+ WIE ++SH+L+RI++ N
Sbjct: 311 FTDTFDELASIFADNSKKPKNIFSYWRDLIRKDKSIDEIMLWIEWIISHTLLRIAESSNS 370
Query: 300 KEFDDFWLRQGATXXXXXXXXXXXXXXXRAAYAVATFVVIDDQNAMVDCQRAEAILRHGG 359
+ +DFWL QGAT RAA +ATF+V+DD+NA +DC RAEA++R GG
Sbjct: 371 QGLNDFWLNQGATLLLSLMQSAQEDVQERAATGLATFIVVDDENASIDCGRAEAVMRDGG 430
Query: 360 VRLLLDLARSPPEGLQSEVAKAIANLSVDSKVAKAVSENGGIDILADLARSTNRLVAEEV 419
+RLLL+LA+S EGLQSE AKAIANLSV++KVAKAV+E GGI +LADLA+S NRLVAEE
Sbjct: 431 IRLLLELAKSWREGLQSEAAKAIANLSVNAKVAKAVAEEGGISVLADLAKSMNRLVAEEA 490
Query: 420 VGGLWNLSVGEDHXXXXXXXXXXXXLVDLIFKWSSWNDGVLERXXXXXXXXXXDDKCSLE 479
GGLWNLSVGE+H LVDLIF+W DGVLER DDKCS+E
Sbjct: 491 AGGLWNLSVGEEHKNAIAQAGGVNALVDLIFRWPHGCDGVLERAAGALANLAADDKCSME 550
Query: 480 VARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLT 539
VARAGGVHALVMLAR+ +EG QEQAARALANL AHGDSN NNAAVG E GALEALVQLT
Sbjct: 551 VARAGGVHALVMLARNCKYEGAQEQAARALANLAAHGDSNGNNAAVGQEAGALEALVQLT 610
Query: 540 FSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALW 599
S HEGV+QEAAGALWNL+FDD+NR +S S++S GLQER AGALW
Sbjct: 611 QSPHEGVKQEAAGALWNLAFDDKNRESIAAFGGVEALVALAKSSSNASTGLQERVAGALW 670
Query: 600 GLSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQ 659
GLS+SEANSIAIG EGG+ PLIAL RS DVHETAAGALWNL+FNPGNAL IVE GGV
Sbjct: 671 GLSVSEANSIAIGHEGGIPPLIALVRSEAEDVHETAAGALWNLSFNPGNALRIVEEGGVV 730
Query: 660 ALIHLCSSSLSKMARFMAALALAYIVDGRMEDIASIGSSLEGTSESENLDVIRRMALKHI 719
AL+ LCSSS+SKMARFMAALALAY+ DGRM++ A IG+SLE TS+S L+ R MAL I
Sbjct: 731 ALVQLCSSSVSKMARFMAALALAYMFDGRMDEYAMIGTSLESTSKSVTLNGARTMALDQI 790
Query: 720 EDFCAGRIALKHIEDFVRSFSDPQAFATALASAVPKSLAQITEGARIPEAAHLRCSGAEI 779
+ F +++F + Q F+T S+ P LAQ++E ARIPEA HLRCSG+EI
Sbjct: 791 KAF-------------IKTFMEHQIFSTGALSSAPSMLAQVSERARIPEAGHLRCSGSEI 837
Query: 780 GRFVSMLRNPSSILKACAAVALLQFTMPGGQHSMHHTNLLQNVGAPRVLQSTXXXXXXXX 839
GRFV+MLRNP +L+ACAA ALLQFT+P +H+MHH +L+QN G R L+S
Sbjct: 838 GRFVTMLRNPCLVLRACAAFALLQFTIPESRHAMHHASLMQNAGEARGLRSAAAAASMPR 897
Query: 840 XXXXXXKIVLRNLEHHQNQHVE 861
KIVLRNLEH Q + E
Sbjct: 898 EAKIFMKIVLRNLEHQQAESPE 919
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 207 (77.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 61/188 (32%), Positives = 92/188 (48%)
Query: 502 QEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDD 561
Q QA L L H N +N V +GA+ LV+L +S ++ A AL NLS +D
Sbjct: 561 QRQATAELRLLAKH---NMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSIND 617
Query: 562 RNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLI 621
N+ + + SS ++ E +A L+ LS+ E N I IG+ G + PL+
Sbjct: 618 NNKKAIADAGAIEPLIHVLENGSSEAK---ENSAATLFSLSVIEENKIKIGQSGAIGPLV 674
Query: 622 ALARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAALA- 680
L + + AA AL+NL+ + N IV+ G V+ LI L + + + +A LA
Sbjct: 675 DLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLAN 734
Query: 681 LAYIVDGR 688
LA I +GR
Sbjct: 735 LATIPEGR 742
Score = 150 (57.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 63/261 (24%), Positives = 112/261 (42%)
Query: 380 KAIANLSVDSKVAKAVSENGGIDILADLARSTNRLVAEEVVGGLWNLSVGEDHXXXXXXX 439
+ +A ++D+++ + +G I +L +L ST+ E V L NLS+ +++
Sbjct: 569 RLLAKHNMDNRIV--IGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADA 626
Query: 440 XXXXXLVDLIFKWSSWNDGVLERXXXXXXXXXXDDKCSLEVARAGGVHALVMLARSFMFE 499
L+ ++ SS E ++ +++ ++G + LV L +
Sbjct: 627 GAIEPLIHVLENGSS---EAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPR 683
Query: 500 GVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSF 559
G ++ AA AL NL H + N A+ +++GA+ L+ L G+ +A L NL+
Sbjct: 684 G-KKDAATALFNLSIHQE----NKAMIVQSGAVRYLIDL-MDPAAGMVDKAVAVLANLAT 737
Query: 560 DDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEANSI-AIGREGGVA 618
R V S++G +E AA AL LS + + +EG V
Sbjct: 738 IPEGRNAIGQEGGIPLLVEVVEL--GSARG-KENAAAALLQLSTNSGRFCNMVLQEGAVP 794
Query: 619 PLIALARSAVVDVHETAAGAL 639
PL+AL++S E A L
Sbjct: 795 PLVALSQSGTPRAREKAQALL 815
Score = 145 (56.1 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 60/246 (24%), Positives = 100/246 (40%)
Query: 445 LVDLIFKWSSWNDGVLERXXXXXXXXXXDDKCSLEVARAGGVHALVMLARSFMFEGVQEQ 504
LV+L++ S + E +D +A AG + L+ + + G E
Sbjct: 591 LVELLY---STDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLEN----GSSEA 643
Query: 505 AARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDDRNR 564
+ A L + N +G ++GA+ LV L + +++AA AL+NLS N+
Sbjct: 644 KENSAATLFSLSVIEENKIKIG-QSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENK 702
Query: 565 XXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIALA 624
+ + G+ ++A L L+ AIG+EGG+ L+ +
Sbjct: 703 AMIVQSGAVRYLIDLM----DPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVV 758
Query: 625 RSAVVDVHETAAGALWNLAFNPGNALC--IVEGGGVQALIHLCSSSLSKMARFMAALALA 682
E AA AL L+ N G C +++ G V L+ L S + AR A L+
Sbjct: 759 ELGSARGKENAAAALLQLSTNSGR-FCNMVLQEGAVPPLVALSQSGTPR-AREKAQALLS 816
Query: 683 YIVDGR 688
Y + R
Sbjct: 817 YFRNQR 822
Score = 127 (49.8 bits), Expect = 0.00031, P = 0.00031
Identities = 62/240 (25%), Positives = 95/240 (39%)
Query: 580 VRSCSSSSQGLQERAAGALWGLSLSEA-NSIAIGREGGVAPLIALARSAVVDVHETAAGA 638
V SSS Q +A L L+ N I IG G + L+ L S E A A
Sbjct: 550 VEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTA 609
Query: 639 LWNLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAA--LALAYIVDGRME--DIAS 694
L NL+ N N I + G ++ LIH+ + S+ AA +L+ I + +++ +
Sbjct: 610 LLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGA 669
Query: 695 IGSSLE----GTSESENLDVIRRMALKHIEDFCAGRIALKHIEDFVRSFSDPQAFATALA 750
IG ++ GT + D + I I ++ DP A
Sbjct: 670 IGPLVDLLGNGTPRGKK-DAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAA------ 722
Query: 751 SAVPKSLAQITEGARIPEAAHLRCSGAEIGRFVSMLRNPSSILKACAAVALLQFTMPGGQ 810
V K++A + A IPE + I V ++ S+ K AA ALLQ + G+
Sbjct: 723 GMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSGR 782
>ASPGD|ASPL0000008980 [details] [associations]
symbol:AN12408 species:162425 "Emericella nidulans"
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000011 "vacuole inheritance"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000329
EMBL:BN001301 GO:GO:0000011 GO:GO:0016236 GO:GO:0042144
PANTHER:PTHR23315:SF8 HOGENOM:HOG000177331 OMA:EEIQCHA
GO:GO:0071255 GO:GO:0071563 GO:GO:0071561 GO:GO:0071562
ProteinModelPortal:C8V2Y6 EnsemblFungi:CADANIAT00007711
Uniprot:C8V2Y6
Length = 579
Score = 177 (67.4 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 82/320 (25%), Positives = 133/320 (41%)
Query: 350 RAEAILRHGG-VRLLLDLARSPPEGLQSEVAKAIANLSVDSKVAKAVSENGGIDILADLA 408
RAE G +R L L S LQ + A ++ + V + + ++ + L
Sbjct: 59 RAETDFFSGEPLRALSTLVYSDNVDLQRSASLTFAEIT-ERDVREV--DRDTLEPILFLL 115
Query: 409 RSTNRLVAEEVVGGLWNLSVGEDHXXXXXXXXXXXXLVDLIFKWSSWNDGVLERXXXXXX 468
+S++ V L NL+V D+ L LI + S N V
Sbjct: 116 QSSDIEVQRAASAALGNLAVNADNKVLIVALGG---LAPLIKQMMSPNVEVQCNAVGCIT 172
Query: 469 XXXXDDKCSLEVARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLE 528
+ ++AR+G + L+ LA+S VQ A AL N+ H D N +
Sbjct: 173 NLATHEDNKAKIARSGALGPLIRLAKSKDMR-VQRNATGALLNMT-HSDDNRQQL---VN 227
Query: 529 TGALEALVQLTFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQ 588
GA+ LVQL S V+ AL N++ D NR V SS+
Sbjct: 228 AGAIPVLVQLLSSSDVDVQYYCTTALSNIAVDASNRKRLAQTESRLVQSL-VHLMDSSTP 286
Query: 589 GLQERAAGALWGLSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALWNLAFNPGN 648
+Q +AA AL L+ E + I R G+ PL+ L +S+ + + +A + N++ +P N
Sbjct: 287 KVQCQAALALRNLASDEKYQLEIVRAKGLPPLLRLLQSSYLPLILSAVACIRNISIHPLN 346
Query: 649 ALCIVEGGGVQALIHLCSSS 668
I++ G ++ L+ L S+
Sbjct: 347 ESPIIDAGFLKPLVDLLGST 366
Score = 130 (50.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 86/375 (22%), Positives = 148/375 (39%)
Query: 354 ILRHGGVRLLLDLARSPPEGLQSEVAKAIANLSVDSKVAKAVSENGGIDILADLARSTNR 413
I R G + L+ LA+S +Q A+ N++ + + G I +L L S++
Sbjct: 184 IARSGALGPLIRLAKSKDMRVQRNATGALLNMTHSDDNRQQLVNAGAIPVLVQLLSSSDV 243
Query: 414 LVAEEVVGGLWNLSVGEDHXXXXXXXXXXXXLVD-LIFKWSSWNDGVLERXXXXXXXXXX 472
V L N++V D LV L+ S V +
Sbjct: 244 DVQYYCTTALSNIAV--DASNRKRLAQTESRLVQSLVHLMDSSTPKVQCQAALALRNLAS 301
Query: 473 DDKCSLEVARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGAL 532
D+K LE+ RA G+ L+ L +S + A + N+ H N + + ++ G L
Sbjct: 302 DEKYQLEIVRAKGLPPLLRLLQSSYLPLILSAVA-CIRNISIHP---LNESPI-IDAGFL 356
Query: 533 EALVQLTFSK-HEGVRQEAAGALWNLSFD-DRNRXXXXXXXXXXXXXXXVRSCSSSSQGL 590
+ LV L S +E ++ A L NL+ DRN+ V + +
Sbjct: 357 KPLVDLLGSTDNEEIQCHAISTLRNLAASSDRNKELVLQAGAVQKCKDLVLRVPVT---V 413
Query: 591 QERAAGALWGLSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALWNLAFNPGNAL 650
Q A+ L+LS+ + G LI L S ++V +A AL NL+ G+
Sbjct: 414 QSEMTAAIAVLALSDELKPHLLSLGVFDVLIPLTESDSIEVQGNSAAALGNLSSKVGDYS 473
Query: 651 CIVE-----GGGVQALIHLCSSSLSKMARFMAALALAYIVDGRMEDIASIGSSLEGTSES 705
V GG+ + +S + +A L +++ ED +G G S+
Sbjct: 474 IFVRDWADPNGGIHGYLKRFLASGDPTFQHIAIWTLLQLLES--EDKRLVGYI--GKSD- 528
Query: 706 ENLDVIRRMALKHIE 720
+ + ++R ++ K+IE
Sbjct: 529 DIVQMVRSISDKNIE 543
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 168 (64.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 58/229 (25%), Positives = 101/229 (44%)
Query: 503 EQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDDR 562
E+ R++ + N N + GA+ LVQL G+++ A L NLS D+
Sbjct: 394 EEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEV 453
Query: 563 NRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIA 622
N+ + + ++ +E +A AL+ LS+ + N + IG G+ PL+
Sbjct: 454 NKKLISNEGAIPNI---IEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVD 510
Query: 623 LARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAALALA 682
L + + + A AL+NL+ N N ++ G VQ L++L + AL++
Sbjct: 511 LLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDK--NLGMIDEALSIL 568
Query: 683 YIVDGRMEDIASIGSSLEGTSESENL-DVIRRMALKHIEDFCAGRIALK 730
++ E +IG S E L + IR+ K+ E CA + L+
Sbjct: 569 LLLASHPEGRQAIGQ----LSFIETLVEFIRQGTPKNKE--CATSVLLE 611
Score = 45 (20.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 15/77 (19%), Positives = 34/77 (44%)
Query: 64 CRELTDAIFSAIVARHEMLEILHFGLDVCDRISSDAIKTVAYCC-PKLRRLWLSGVRE-- 120
C+ + + +A ++LE G + + + + T + KL R+ + +
Sbjct: 103 CKHFLNRLRKVFLAAKKLLETCSNGSKIYMALDGETMMTRFHSIYEKLNRVLVKAPFDEL 162
Query: 121 -VNGDAINALAKQCRQL 136
++GDA + + C+QL
Sbjct: 163 MISGDAKDEIDSLCKQL 179
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 162 (62.1 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 52/180 (28%), Positives = 77/180 (42%)
Query: 519 NSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXX 578
N++N E GA+ LV L + +++ + AL NLS + N+
Sbjct: 383 NADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGI-- 440
Query: 579 XVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGA 638
V+ S +E AA L+ LS+ + N + IG G + PL+ L + AA A
Sbjct: 441 -VQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATA 499
Query: 639 LWNLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAALALAYIVDGRMEDIASIGSS 698
L+NL GN + G + L L + S M ALA+ I+ E A IGSS
Sbjct: 500 LFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVD--EALAILAILSSHPEGKAIIGSS 557
Score = 123 (48.4 bits), Expect = 0.00062, P = 0.00062
Identities = 61/266 (22%), Positives = 102/266 (38%)
Query: 362 LLLDLARSPPEGLQSEVA--KAIANLSVDSKVAKAVSENGGIDILADLARSTNRLVAEEV 419
L+ LA PE +S + +A + D++VA ++E G I +L L + + + E
Sbjct: 357 LMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVA--IAEAGAIPLLVGLLSTPDSRIQEHS 414
Query: 420 VGGLWNLSVGEDHXXXXXXXXXXXXLVDLIFKWSSWNDGVLERXXXXXXXXXXDDKCSLE 479
V L NLS+ E++ +V ++ K S E D+ +
Sbjct: 415 VTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSM---EARENAAATLFSLSVIDENKVT 471
Query: 480 VARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLT 539
+ G + LV+L G ++ AA AL NL + N + G + L +L
Sbjct: 472 IGALGAIPPLVVLLNEGTQRG-KKDAATALFNLCIY----QGNKGKAIRAGVIPTLTRLL 526
Query: 540 FSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALW 599
G+ EA L LS + +R+ S ++ E AA L
Sbjct: 527 TEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNR---ENAAAVLV 583
Query: 600 GLSLSEANSIAIGREGGV-APLIALA 624
L + + ++ G+ PLI LA
Sbjct: 584 HLCSGDPQHLVEAQKLGLMGPLIDLA 609
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 161 (61.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 47/188 (25%), Positives = 90/188 (47%)
Query: 503 EQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDDR 562
++ A A ++A ++++N V A+ +LV L +S E ++ +A L NLS +D
Sbjct: 438 QREATARIRILAR--NSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDN 495
Query: 563 NRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIA 622
N+ +++ + + +A L+ LS+ E IG G + PL+
Sbjct: 496 NKSLIAESGAIVPLIHVLKT--GYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVD 553
Query: 623 LARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAALA-L 681
L S + + AA AL+NL+ + N ++E G V+ L+ L + + + + LA L
Sbjct: 554 LLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEKAVVVLANL 613
Query: 682 AYIVDGRM 689
A + +G++
Sbjct: 614 ATVREGKI 621
Score = 131 (51.2 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 72/286 (25%), Positives = 116/286 (40%)
Query: 360 VRLLLDLARSPPEGLQSEVA---KAIANLSVDSKVAKAVSENGGIDILADLARSTNRLVA 416
V+ L+D +S Q E + +A S D+++ A E I L L ST+ +
Sbjct: 423 VKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCE--AIPSLVSLLYSTDERIQ 480
Query: 417 EEVVGGLWNLSVGEDHXXXXXXXXXXXXLVDLIFKWSSWNDGVLERXXXXXXXXXXDDKC 476
+ V L NLS+ +++ L+ ++ K + + + ++
Sbjct: 481 ADAVTCLLNLSINDNNKSLIAESGAIVPLIHVL-K-TGYLEEAKANSAATLFSLSVIEEY 538
Query: 477 SLEVARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGALEALV 536
E+ AG + LV L S G ++ AA AL NL H + N V +E GA+ LV
Sbjct: 539 KTEIGEAGAIEPLVDLLGSGSLSG-KKDAATALFNLSIH---HENKTKV-IEAGAVRYLV 593
Query: 537 QLTFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAG 596
+L G+ ++A L NL+ + V S++G +E A
Sbjct: 594 EL-MDPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVEL--GSARG-KENATA 649
Query: 597 ALWGL---SLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGAL 639
AL L S N++ REG + PL+AL +S E A L
Sbjct: 650 ALLQLCTHSPKFCNNVI--REGVIPPLVALTKSGTARGKEKAQNLL 693
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 51/200 (25%), Positives = 83/200 (41%)
Query: 473 DDKCSLEVARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGAL 532
D+ SL +A +G + L+ + ++ E E A + A L + +G E GA+
Sbjct: 494 DNNKSL-IAESGAIVPLIHVLKTGYLE---EAKANSAATLFSLSVIEEYKTEIG-EAGAI 548
Query: 533 EALVQLTFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQE 592
E LV L S +++AA AL+NLS N+ + + G+ E
Sbjct: 549 EPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM----DPAFGMVE 604
Query: 593 RAAGALWGLSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALWNLA-FNPGNALC 651
+A L L+ IAIG EGG+ L+ + E A AL L +P
Sbjct: 605 KAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNN 664
Query: 652 IVEGGGVQALIHLCSSSLSK 671
++ G + L+ L S ++
Sbjct: 665 VIREGVIPPLVALTKSGTAR 684
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 166 (63.5 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 62/225 (27%), Positives = 94/225 (41%)
Query: 500 GVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSF 559
G EQ A L N +N E GA+ LV+L S ++ + AL NLS
Sbjct: 357 GTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSI 416
Query: 560 DDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAP 619
++ N+ V + S +E AA L+ LS+ + N +AIG G +
Sbjct: 417 NEGNKGAIVDAGAITDI---VEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQA 473
Query: 620 LIALARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAAL 679
LI+L + AA A++NL GN V+GG V L L + M AL
Sbjct: 474 LISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVD--EAL 531
Query: 680 ALAYIVDGRMEDIASIGSSLEGTSESENLDVIRRMALKHIEDFCA 724
A+ I+ E +I E S +++IR + ++ E+ A
Sbjct: 532 AILAILSTNQEGKTAIA---EAESIPVLVEIIRTGSPRNRENAAA 573
Score = 40 (19.1 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 366 LARSPPEGLQ--SEVAKAIANLSVDSKVAKAVSENGGIDILADLARSTNRLVAEEVV 420
L++ P E ++ EV + + L K AK E + + DLA + N + + ++
Sbjct: 116 LSQIPYEKIEVSEEVREQVQLLHFQFKRAKERWEESDLQLSHDLAMAENVMDPDPII 172
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 158 (60.7 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 57/205 (27%), Positives = 86/205 (41%)
Query: 487 HALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGV 546
HA ++ + + G Q++ A + N NN E GA+ LV L S
Sbjct: 322 HAGLVSLMNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRT 381
Query: 547 RQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEA 606
++ A AL NLS + N+ V + S +E AA L+ LS+ +
Sbjct: 382 QEHAVTALLNLSIHENNKASIVDSHAIPKI---VEVLKTGSMETRENAAATLFSLSVVDE 438
Query: 607 NSIAIGREGGVAPLIALARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQALIHLCS 666
N + IG G + PLI L + AA A++NL GN + V+ G V IHL +
Sbjct: 439 NKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIV---IHLMN 495
Query: 667 SSLSKMARFM-AALALAYIVDGRME 690
+ + AL+L I+ G E
Sbjct: 496 FLVDPTGGMIDEALSLLSILAGNPE 520
Score = 122 (48.0 bits), Expect = 0.00072, P = 0.00072
Identities = 61/246 (24%), Positives = 100/246 (40%)
Query: 480 VARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLT 539
+A AG + LV L S QE A AL NL H NN A +++ A+ +V++
Sbjct: 361 IAEAGAIPLLVNLLSS-SDPRTQEHAVTALLNLSIH----ENNKASIVDSHAIPKIVEVL 415
Query: 540 FSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALW 599
+ R+ AA L++LS D N+ + C S +G ++ AA A++
Sbjct: 416 KTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLL--CDGSPRGKKD-AATAIF 472
Query: 600 GLSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQ 659
L + + N + + G V L+ + + A L LA NP + I +
Sbjct: 473 NLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVIARSEPIP 532
Query: 660 ALIHLCSSSLSKMARFMAALALAYIVDGRMEDI-----ASIGSSLEGTSESENLDVIRRM 714
L+ + + S R AA L + E A + +L+ SE+ D +R
Sbjct: 533 PLVEVIKTG-SPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSET-GTDRAKRK 590
Query: 715 ALKHIE 720
A +E
Sbjct: 591 ASSILE 596
>TAIR|locus:2150295 [details] [associations]
symbol:ARIA "ARM repeat protein interacting with ABF2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;IMP]
[GO:0010187 "negative regulation of seed germination" evidence=IMP]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=RCA] InterPro:IPR000225 InterPro:IPR000210
InterPro:IPR013069 InterPro:IPR016024 Pfam:PF00514 Pfam:PF00651
PROSITE:PS50097 PROSITE:PS50176 SMART:SM00185 SMART:SM00225
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009651 EMBL:AF296837
eggNOG:COG5064 HOGENOM:HOG000030229 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0010187
EMBL:AY058878 EMBL:AK317640 EMBL:AK220904 IPI:IPI00546696
RefSeq:NP_850852.1 UniGene:At.20128 ProteinModelPortal:B9DHT4
SMR:B9DHT4 STRING:B9DHT4 PaxDb:B9DHT4 PRIDE:B9DHT4
EnsemblPlants:AT5G19330.1 GeneID:832053 KEGG:ath:AT5G19330
TAIR:At5g19330 OMA:SEAFHAM PhylomeDB:B9DHT4 ArrayExpress:B9DHT4
Genevestigator:B9DHT4 Uniprot:B9DHT4
Length = 710
Score = 162 (62.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 72/259 (27%), Positives = 108/259 (41%)
Query: 484 GGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKH 543
GG+ LV L F VQ AA AL L D N N +E AL L+ + S+
Sbjct: 198 GGIPPLVELLE-FSDSKVQRAAAGALRTLAFKNDDNKNQI---VECNALPTLILMLGSED 253
Query: 544 EGVRQEAAGALWNLSFDDRN-RXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLS 602
+ EA G + NL + + + SC SQ R A L G
Sbjct: 254 AAIHYEAVGVIGNLVHSSPHIKKEVLTAGALQPVIGLLSSCCPESQ----REAALLLGQF 309
Query: 603 LSEANS--IAIGREGGVAPLIALARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQA 660
S + + I + G V PLI + +S V + E +A AL LA + N I GG+
Sbjct: 310 ASTDSDCKVHIVQRGAVRPLIEMLQSPDVQLKEMSAFALGRLAQDAHNQAGIAHSGGLGP 369
Query: 661 LIHLCSSSLSKMARFMAALALAYIVDGR--MEDIASIGSSLEGTSESENL-----DVIRR 713
L+ L S + + AA AL + D + D +G ++ + E + D + +
Sbjct: 370 LLKLLDSRNGSL-QHNAAFALYGLADNEDNVSDFIRVGG-IQKLQDGEFIVQATKDCVSK 427
Query: 714 MALKHIEDFCAGRIALKHI 732
LK +E+ GR+ L+H+
Sbjct: 428 -TLKRLEEKIHGRV-LRHL 444
Score = 44 (20.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 368 RSPPE--GLQSEVAKAIANLSVDSKVAKAVSENGGIDILADLARSTNRL 414
RS PE G + ++ + A +V+ + AVS +GG +L+++A + L
Sbjct: 11 RSFPERKGQKRKLEEGAA--AVEDREISAVSTDGGQALLSEVAAQVSVL 57
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 155 (59.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 53/193 (27%), Positives = 90/193 (46%)
Query: 483 AGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSK 542
+G + A+ L + ++++ A++ + + +++N + E GA+ LV+L S
Sbjct: 337 SGDMSAIRALVCKLSSQSIEDRRT-AVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSD 395
Query: 543 HEGVRQE-AAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGL 601
+ QE A + NLS + N+ +R+ S ++ E AA L+ L
Sbjct: 396 GDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEAR---ENAAATLFSL 452
Query: 602 SLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQAL 661
SL++ N I IG G + L+ L + V + AA AL+NL GN V G V+ L
Sbjct: 453 SLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPL 512
Query: 662 IH-LCSSSLSKMA 673
+ L SS +MA
Sbjct: 513 VKMLTDSSSERMA 525
>DICTYBASE|DDB_G0288877 [details] [associations]
symbol:aarA "beta-catenin related protein"
species:44689 "Dictyostelium discoideum" [GO:0006928 "cellular
component movement" evidence=IGI] [GO:0005911 "cell-cell junction"
evidence=TAS] [GO:0005813 "centrosome" evidence=TAS] [GO:0045180
"basal cortex" evidence=IDA] [GO:0036360 "sorocarp stalk
morphogenesis" evidence=IMP] [GO:0034613 "cellular protein
localization" evidence=IMP] [GO:0003382 "epithelial cell
morphogenesis" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0061245 "establishment or maintenance
of bipolar cell polarity" evidence=IMP] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0051495 "positive regulation of cytoskeleton
organization" evidence=IMP] [GO:0045294 "alpha-catenin binding"
evidence=IPI] [GO:0031150 "sorocarp stalk development"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
InterPro:IPR000225 InterPro:IPR001810 InterPro:IPR016024
Pfam:PF00646 PROSITE:PS50176 PROSITE:PS50181 SMART:SM00185
SMART:SM00256 dictyBase:DDB_G0288877 GO:GO:0005813 SUPFAM:SSF48371
GO:GO:0034613 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007155
EMBL:AF305417 EMBL:AAFI02000126 RefSeq:XP_636508.1
ProteinModelPortal:Q54I71 EnsemblProtists:DDB0191132 GeneID:8626891
GenomeReviews:CM000154_GR KEGG:ddi:DDB_G0288877 eggNOG:NOG285047
InParanoid:Q54I71 GO:GO:0045180 GO:GO:0005911 GO:GO:0006928
GO:GO:0051642 GO:GO:0003382 GO:GO:0061245 GO:GO:0051645
GO:GO:0051495 GO:GO:0009306 GO:GO:0036360 SUPFAM:SSF81383
Uniprot:Q54I71
Length = 757
Score = 166 (63.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 79/313 (25%), Positives = 125/313 (39%)
Query: 395 VSENGGIDILADLARST--NRLVAEEVVGGLWNLSVGEDHXXXXXXXXXXXXLVD----- 447
++ GGI ++ ++ + V E+ G L NL+ + +V+
Sbjct: 450 IARYGGISLILQAMKNHPYDAGVQEDACGALGNLTCDSPNNMGLYSNDNYLSVVEQGGIQ 509
Query: 448 LIF---KWSSWNDGVLERXXXXXXXXXXDDKCSLEVARAGGVHALVMLARSFMFE-GVQE 503
LI K N GV +D VA GG+ ++ ++ G+Q
Sbjct: 510 LILQAMKNHMMNPGVQYNTSFVLRNLARNDVSESRVAIEGGIQSIATAMKNHPNHIGIQT 569
Query: 504 QAARALANLVAHGDSNSNNAAVGLETG-ALEALVQLTFSKHEGVRQEAAGALWNLSFDDR 562
Q AL NL G ++SN E G L +FS H ++ GAL NL+ ++
Sbjct: 570 QGCGALRNL---GCNDSNKVLSAKEGGIGLILRAMRSFSSHPDLQLNGCGALRNLARNED 626
Query: 563 NRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLS-EANSIAIGREGGVAPLI 621
N+ + S +Q+ AL L+ EAN I REGG+ ++
Sbjct: 627 NKNMISRQNGIQLVLGAM-SNHPDDPDVQDEGCAALINLAYQDEANEETIAREGGINLIL 685
Query: 622 ALARSAVVD--VHETAAGALWNLAFNPGNALCIVEGGGVQALIHLCSSSLSKMA-RFMAA 678
R+ V GAL NL+ NP N L I GG++ L+++ + A RF
Sbjct: 686 KAMRNHPFHSGVQMQGRGALKNLSCNPKNKLTIARSGGIE-LMNIAMQNHPNFANRF--- 741
Query: 679 LALAYIVDGRMED 691
L L+ I+ +ED
Sbjct: 742 LELSRILQVALED 754
Score = 161 (61.7 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 63/238 (26%), Positives = 107/238 (44%)
Query: 473 DDKCSLEVARAGGVHALVMLARSFMFE-GVQEQAARALANLVAHGDSN----SNNAAVGL 527
D+ SL +AR GG+ ++ ++ ++ GVQE A AL NL +N SN+ + +
Sbjct: 444 DEHESL-IARYGGISLILQAMKNHPYDAGVQEDACGALGNLTCDSPNNMGLYSNDNYLSV 502
Query: 528 -ETGALEALVQL--TFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCS 584
E G ++ ++Q + GV+ + L NL+ +D + +++
Sbjct: 503 VEQGGIQLILQAMKNHMMNPGVQYNTSFVLRNLARNDVSESRVAIEGGIQSIATAMKN-H 561
Query: 585 SSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIALARS--AVVDVHETAAGALWNL 642
+ G+Q + GAL L +++N + +EGG+ ++ RS + D+ GAL NL
Sbjct: 562 PNHIGIQTQGCGALRNLGCNDSNKVLSAKEGGIGLILRAMRSFSSHPDLQLNGCGALRNL 621
Query: 643 AFNPGNALCIVEGGGVQALIHLCSSSLSK---MARFMAALA-LAYIVDGRMEDIASIG 696
A N N I G+Q ++ S+ AAL LAY + E IA G
Sbjct: 622 ARNEDNKNMISRQNGIQLVLGAMSNHPDDPDVQDEGCAALINLAYQDEANEETIAREG 679
Score = 37 (18.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 267 RKLKVRDRISDEIVSWIERVLSHSLMRISKKN 298
++L R R DE S I R SL+ + KN
Sbjct: 434 KRLSYRQRKEDEHESLIARYGGISLILQAMKN 465
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 151 (58.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 59/222 (26%), Positives = 108/222 (48%)
Query: 503 EQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDDR 562
+++A A L+A ++ N +G E+GA++AL+ L ++ A AL NLS D+
Sbjct: 200 KRSAAAKLRLLAKNRAD-NRVLIG-ESGAIQALIPLLRCNDPWTQEHAVTALLNLSLHDQ 257
Query: 563 NRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIA 622
N+ +++ + +S+ + AA AL L+L E N +IG G + PL++
Sbjct: 258 NKAVIAAGGAIKSLVWVLKTGTETSK---QNAACALLSLALLEENKGSIGACGAIPPLVS 314
Query: 623 LARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQALIHLCSSSLSKMA-RFMAALA- 680
L + + A L+ L N V G V+ L+ L + + MA + M L+
Sbjct: 315 LLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMAEKAMVVLSS 374
Query: 681 LAYIVDGR---MED--IASIGSSLE-GTSESENLDVIRRMAL 716
LA I DG+ +E+ IA++ ++E G+ + + ++ + L
Sbjct: 375 LAAIDDGKEAIVEEGGIAALVEAIEDGSVKGKEFAILTLLQL 416
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 149 (57.5 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 45/166 (27%), Positives = 75/166 (45%)
Query: 503 EQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDDR 562
E A++ + + +++N + E GA+ LV L S+ ++ A + NLS +
Sbjct: 346 EDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYEN 405
Query: 563 NRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIA 622
N+ +R+ + ++ E AA L+ LSL++ N I IG G + L+
Sbjct: 406 NKELIMFAGAVTSIVQVLRAGTMEAR---ENAAATLFSLSLADENKIIIGGSGAIPALVD 462
Query: 623 LARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQALIHLCSSS 668
L + + AA AL+NL GN V G V AL+ + S S
Sbjct: 463 LLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDS 508
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 151 (58.2 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 50/172 (29%), Positives = 81/172 (47%)
Query: 519 NSNNAAVGLETGA-LEALVQLTFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXX 577
+S + V L T L L L S++ V+ AA ++ NLS + +N+
Sbjct: 264 SSEDLRVSLCTDRILSFLRSLLVSRYNLVQTNAAASVVNLSLEKQNKVKIVRSGFVPLLI 323
Query: 578 XXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIALARSAVVD-VHETAA 636
++S ++ +Q E AGAL+ L+L + N + IG G V PL+ RS+ + + AA
Sbjct: 324 DVLKSGTTEAQ---EHVAGALFSLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAA 380
Query: 637 GALWNLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAALALAYIVDGR 688
AL++L+ P N +V G V L+ + S S + LA DG+
Sbjct: 381 LALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRILLVLCNLAACPDGK 432
Score = 44 (20.5 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 41 GALSADAMIILQARRLREINVEFCREL 67
G L +D +++ + ++V+ CR L
Sbjct: 41 GFLMSDPVVVSSGQTFERLSVQVCRNL 67
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 142 (55.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 50/179 (27%), Positives = 86/179 (48%)
Query: 518 SNSNNAA-VGLETGALEALVQ-LTFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXX 575
+ SN + L T + +L++ L S++ V+ AA ++ NLS + N+
Sbjct: 211 TRSNETTRISLCTDRILSLLRSLIVSRYNIVQTNAAASIVNLSLEKPNKLKIVRSGFVPL 270
Query: 576 XXXXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIALARSAVVD-VHET 634
++S S+ +Q E GAL+ L++ E N + IG G V PL+ RS+ + +
Sbjct: 271 LIDVLKSGSTEAQ---EHVIGALFSLAVEEENKMVIGVLGAVEPLLHALRSSESERARQD 327
Query: 635 AAGALWNLAFNPGNALCIVEGGGVQALIHLCSS--SLSKMARFMAALALAYIVDGRMED 691
AA AL++L+ P N +V+ G V ++ + S S S++ + LA G M D
Sbjct: 328 AALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSGESASRILLLLCNLAACSEGKGAMLD 386
Score = 49 (22.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 41 GALSADAMIILQARRLREINVEFCRELTDA 70
G L +D +++ + I+V+ CR L+ A
Sbjct: 20 GFLMSDPVVVASGQTFERISVQVCRNLSFA 49
Score = 37 (18.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 360 VRLLLDLARSPP--EGLQSEVAKAIANLSVDSKVAKAVSEN 398
V++ +L+ +P +G Q +++ I NL++ S + N
Sbjct: 40 VQVCRNLSFAPKLHDGTQPDLSTVIPNLAMKSTILSWCDRN 80
>TAIR|locus:1006230171 [details] [associations]
symbol:AT2G14635 "AT2G14635" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005398
IPI:IPI00545155 RefSeq:NP_973457.1 UniGene:At.47308
EnsemblPlants:AT2G14635.1 GeneID:2745532 KEGG:ath:AT2G14635
TAIR:At2g14635 Genevestigator:Q3EC08 Uniprot:Q3EC08
Length = 61
Score = 121 (47.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 650 LCIVEGGGVQALIHLCSSSLSKMARFMAALALAYIVDGRMEDIASIGSSL 699
+C+ + GGV A++ LCSS +SKM+ FMAALAL Y+ DG + ++S +SL
Sbjct: 11 VCLFDEGGVPAIVQLCSSFISKMSPFMAALALEYMFDGS-DHMSSTRTSL 59
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 145 (56.1 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 52/196 (26%), Positives = 81/196 (41%)
Query: 503 EQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDDR 562
E+ A A L N+NN E GA+ L+ L S ++ A AL NLS +
Sbjct: 382 EEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHED 441
Query: 563 NRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIA 622
N+ V + S +E AA L+ LS+ + + IG G + L+
Sbjct: 442 NKASIISSGAVPSI---VHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVV 498
Query: 623 LARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAALALA 682
L + AA AL+NL GN + G V ++ L ++ A A+A+
Sbjct: 499 LLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTG--ALMDEAMAIL 556
Query: 683 YIVDGRMEDIASIGSS 698
I+ E A+IG++
Sbjct: 557 SILSSHPEGKAAIGAA 572
>CGD|CAL0001835 [details] [associations]
symbol:VAC8 species:5476 "Candida albicans" [GO:0000011
"vacuole inheritance" evidence=ISS;IMP] [GO:0030448 "hyphal growth"
evidence=IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0071563
"Myo2p-Vac17p-Vac8p transport complex" evidence=IEA] [GO:0071561
"nucleus-vacuole junction" evidence=IEA] [GO:0043495 "protein
anchor" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071562 "nucleus-vacuole junction assembly" evidence=IEA]
[GO:0071255 "CVT vesicle assembly" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185
CGD:CAL0001835 GO:GO:0005774 GO:GO:0071216 GO:GO:0036180
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011
GO:GO:0000324 GO:GO:0030448 eggNOG:NOG265712 KO:K08332
EMBL:AACQ01000222 EMBL:AACQ01000221 RefSeq:XP_710979.1
RefSeq:XP_710992.1 ProteinModelPortal:Q59MN0 STRING:Q59MN0
GeneID:3647410 GeneID:3647417 KEGG:cal:CaO19.745
KEGG:cal:CaO19.8364 PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 144 (55.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 63/243 (25%), Positives = 102/243 (41%)
Query: 461 ERXXXXXXXXXXDDKCSLEVARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNS 520
ER +++ ++ G + AL L S + +Q AA A A + D
Sbjct: 26 EREAISALLQYLENRSDVDFFSNGPLRALSTLVYSENID-LQRSAALAFAE-ITEKDVRE 83
Query: 521 NNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXV 580
N V LE ++ L S V++ A GAL NL+ + N+ +
Sbjct: 84 VNRDV------LEPILILLQSADSEVQRAACGALGNLAVNTENKILIVEMGGLEPL---I 134
Query: 581 RSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALW 640
R S++ +Q A G + L+ + N I + G + PL LA+S + V A GAL
Sbjct: 135 RQMMSTNIEVQCNAVGCITNLATQDDNKSKIAKSGALIPLTKLAKSKDIRVQRNATGALL 194
Query: 641 NLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAALALAYI-VDG-RMEDIASIGSS 698
N+ + N +V G V L+ L S+ + + ++ AL+ I VD + +AS
Sbjct: 195 NMTHSGENRQELVNAGAVPVLVSLLSNEDADV-QYYCTTALSNIAVDEVNRKKLASTEPK 253
Query: 699 LEG 701
L G
Sbjct: 254 LVG 256
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 88/388 (22%), Positives = 154/388 (39%)
Query: 363 LLDLARSPPEGLQSEVAKAIANLSVDSKVAKAVSENGGIDILADLARSTNRLVAEEVVGG 422
+L L +S +Q A+ NL+V+++ + E GG++ L STN V VG
Sbjct: 92 ILILLQSADSEVQRAACGALGNLAVNTENKILIVEMGGLEPLIRQMMSTNIEVQCNAVGC 151
Query: 423 LWNLSVGEDHXXXXXXXXXXXXLVDLIFKWSSWNDGVLERXXXXXXXXXXDDKCSLEVAR 482
+ NL+ +D+ L L S + V + E+
Sbjct: 152 ITNLATQDDNKSKIAKSGALIPLTKLA---KSKDIRVQRNATGALLNMTHSGENRQELVN 208
Query: 483 AGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSK 542
AG V LV L + + VQ AL+N+ D + E + LV L S
Sbjct: 209 AGAVPVLVSLLSNEDAD-VQYYCTTALSNIAV--DEVNRKKLASTEPKLVGQLVHLMDSP 265
Query: 543 HEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLS 602
V+ +A AL NL+ D + V+ + + Q L A + +S
Sbjct: 266 SPRVQCQATLALRNLASDSGYQVEIVRAGGLPHL---VQLLTCNHQPLVLAAVACIRNIS 322
Query: 603 LSEANSIAIGREGGVAPLIAL---ARSAVVDVHETAAGALWNLAFNPG-NALCIVEGGGV 658
+ N I G + PL+ L S + H A L NLA + N ++ G V
Sbjct: 323 IHPLNEALIIEAGFLKPLVGLLDYTDSEEIQCH--AVSTLRNLAASSEKNRTALLAAGAV 380
Query: 659 ----QALIHLCSSSLSKMARFMAALALAYIVDGRMEDIASIGSSLEGTSESENLDVIRRM 714
+ ++ + + S+++ A LALA + ++ + + I L + SEN +V
Sbjct: 381 DKCKELVLKVPLTVQSEISACFAILALADDLKPKLYE-SHIIDVLIPLTFSENGEVCGNS 439
Query: 715 ALKHIEDFCAGRIALKHIEDFVRSFSDP 742
A + + C+ R++ +H + + +++ P
Sbjct: 440 AAA-LANLCS-RVSNEHKQYILNNWAQP 465
>UNIPROTKB|Q59MN0 [details] [associations]
symbol:VAC8 "Vacuolar protein 8" species:237561 "Candida
albicans SC5314" [GO:0000011 "vacuole inheritance"
evidence=ISS;IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185 CGD:CAL0001835
GO:GO:0005774 GO:GO:0071216 GO:GO:0036180 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011 GO:GO:0000324
GO:GO:0030448 eggNOG:NOG265712 KO:K08332 EMBL:AACQ01000222
EMBL:AACQ01000221 RefSeq:XP_710979.1 RefSeq:XP_710992.1
ProteinModelPortal:Q59MN0 STRING:Q59MN0 GeneID:3647410
GeneID:3647417 KEGG:cal:CaO19.745 KEGG:cal:CaO19.8364
PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 144 (55.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 63/243 (25%), Positives = 102/243 (41%)
Query: 461 ERXXXXXXXXXXDDKCSLEVARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNS 520
ER +++ ++ G + AL L S + +Q AA A A + D
Sbjct: 26 EREAISALLQYLENRSDVDFFSNGPLRALSTLVYSENID-LQRSAALAFAE-ITEKDVRE 83
Query: 521 NNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXV 580
N V LE ++ L S V++ A GAL NL+ + N+ +
Sbjct: 84 VNRDV------LEPILILLQSADSEVQRAACGALGNLAVNTENKILIVEMGGLEPL---I 134
Query: 581 RSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALW 640
R S++ +Q A G + L+ + N I + G + PL LA+S + V A GAL
Sbjct: 135 RQMMSTNIEVQCNAVGCITNLATQDDNKSKIAKSGALIPLTKLAKSKDIRVQRNATGALL 194
Query: 641 NLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAALALAYI-VDG-RMEDIASIGSS 698
N+ + N +V G V L+ L S+ + + ++ AL+ I VD + +AS
Sbjct: 195 NMTHSGENRQELVNAGAVPVLVSLLSNEDADV-QYYCTTALSNIAVDEVNRKKLASTEPK 253
Query: 699 LEG 701
L G
Sbjct: 254 LVG 256
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 88/388 (22%), Positives = 154/388 (39%)
Query: 363 LLDLARSPPEGLQSEVAKAIANLSVDSKVAKAVSENGGIDILADLARSTNRLVAEEVVGG 422
+L L +S +Q A+ NL+V+++ + E GG++ L STN V VG
Sbjct: 92 ILILLQSADSEVQRAACGALGNLAVNTENKILIVEMGGLEPLIRQMMSTNIEVQCNAVGC 151
Query: 423 LWNLSVGEDHXXXXXXXXXXXXLVDLIFKWSSWNDGVLERXXXXXXXXXXDDKCSLEVAR 482
+ NL+ +D+ L L S + V + E+
Sbjct: 152 ITNLATQDDNKSKIAKSGALIPLTKLA---KSKDIRVQRNATGALLNMTHSGENRQELVN 208
Query: 483 AGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSK 542
AG V LV L + + VQ AL+N+ D + E + LV L S
Sbjct: 209 AGAVPVLVSLLSNEDAD-VQYYCTTALSNIAV--DEVNRKKLASTEPKLVGQLVHLMDSP 265
Query: 543 HEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLS 602
V+ +A AL NL+ D + V+ + + Q L A + +S
Sbjct: 266 SPRVQCQATLALRNLASDSGYQVEIVRAGGLPHL---VQLLTCNHQPLVLAAVACIRNIS 322
Query: 603 LSEANSIAIGREGGVAPLIAL---ARSAVVDVHETAAGALWNLAFNPG-NALCIVEGGGV 658
+ N I G + PL+ L S + H A L NLA + N ++ G V
Sbjct: 323 IHPLNEALIIEAGFLKPLVGLLDYTDSEEIQCH--AVSTLRNLAASSEKNRTALLAAGAV 380
Query: 659 ----QALIHLCSSSLSKMARFMAALALAYIVDGRMEDIASIGSSLEGTSESENLDVIRRM 714
+ ++ + + S+++ A LALA + ++ + + I L + SEN +V
Sbjct: 381 DKCKELVLKVPLTVQSEISACFAILALADDLKPKLYE-SHIIDVLIPLTFSENGEVCGNS 439
Query: 715 ALKHIEDFCAGRIALKHIEDFVRSFSDP 742
A + + C+ R++ +H + + +++ P
Sbjct: 440 AAA-LANLCS-RVSNEHKQYILNNWAQP 465
>TAIR|locus:2025222 [details] [associations]
symbol:SKP2B "AT1G77000" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0010286 "heat acclimation" evidence=IEP;RCA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IMP] [GO:1901332 "negative regulation of lateral root
development" evidence=IMP] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC002291 InterPro:IPR006553 SMART:SM00367 GO:GO:0010286
GO:GO:0051603 eggNOG:NOG257455 HOGENOM:HOG000238537
ProtClustDB:CLSN2687892 EMBL:BT024747 EMBL:AY087441 EMBL:AK117866
EMBL:AK175607 EMBL:AK175925 IPI:IPI00520157 PIR:A96799
RefSeq:NP_001185415.1 RefSeq:NP_565147.1 UniGene:At.28008
ProteinModelPortal:O49286 SMR:O49286 STRING:O49286
EnsemblPlants:AT1G77000.1 EnsemblPlants:AT1G77000.2 GeneID:844036
KEGG:ath:AT1G77000 TAIR:At1g77000 InParanoid:O49286 KO:K03875
OMA:VALANRC PhylomeDB:O49286 Genevestigator:O49286 GO:GO:1901332
Uniprot:O49286
Length = 360
Score = 139 (54.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 47/151 (31%), Positives = 75/151 (49%)
Query: 12 LDL-RPYKFDTSAAESLSSRCTNLQALWFRGALS-AD-AMIILQ--ARRLREINVEFCRE 66
LDL + K + SL+ CTNL L G S +D A+ L R+L+ +N+ C E
Sbjct: 122 LDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVE 181
Query: 67 -LTDAIFSAIVARHEMLEILHFGLDVCDRISSDAIKTVAYCCPKLRRLWLSGVREVNGDA 125
++D AI L+ L+ G C+ IS D + ++AY CP LR L L + ++
Sbjct: 182 AVSDNTLQAIGENCNQLQSLNLGW--CENISDDGVMSLAYGCPDLRTLDLCSCVLITDES 239
Query: 126 INALAKQCRQLVEVGFIDSGGVDEAALENLS 156
+ ALA +C L +G + + A+ +L+
Sbjct: 240 VVALANRCIHLRSLGLYYCRNITDRAMYSLA 270
>SGD|S000000739 [details] [associations]
symbol:VAC8 "Phosphorylated and palmitoylated vacuolar
membrane protein" species:4932 "Saccharomyces cerevisiae"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IMP;IPI] [GO:0071562
"nucleus-vacuole junction assembly" evidence=IMP] [GO:0071561
"nucleus-vacuole junction" evidence=IDA;IPI] [GO:0000011 "vacuole
inheritance" evidence=IEA;IMP] [GO:0071255 "CVT vesicle assembly"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0071563 "Myo2p-Vac17p-Vac8p transport complex"
evidence=IDA;IPI] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SGD:S000000739 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:COG5064 GO:GO:0000329 EMBL:BK006939 GO:GO:0043495
GO:GO:0000011 GO:GO:0016236 GeneTree:ENSGT00680000099702
EMBL:U18530 GO:GO:0042144 RefSeq:NP_010907.3 GeneID:856709
KEGG:sce:YEL009C KO:K09464 RefSeq:NP_010903.3 GeneID:856702
KEGG:sce:YEL013W KO:K08332 PANTHER:PTHR23315:SF8
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 GO:GO:0071255
EMBL:AF005267 PIR:S50446 ProteinModelPortal:P39968 SMR:P39968
DIP:DIP-5121N IntAct:P39968 MINT:MINT-517641 STRING:P39968
PaxDb:P39968 PeptideAtlas:P39968 EnsemblFungi:YEL013W
NextBio:982766 Genevestigator:P39968 GermOnline:YEL013W
GO:GO:0071563 GO:GO:0071561 GO:GO:0071562 Uniprot:P39968
Length = 578
Score = 141 (54.7 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 75/307 (24%), Positives = 120/307 (39%)
Query: 358 GGVRLLLDLARSPPEGLQSEVAKAIANLSVDSKVAKAVSENGGIDILADLARSTNRLVAE 417
G ++ L L S LQ A A A ++ K + VS IL L +S + +
Sbjct: 47 GPLKALTTLVYSDNLNLQRSAALAFAEIT--EKYVRQVSREVLEPILI-LLQSQDPQIQV 103
Query: 418 EVVGGLWNLSVGEDHXXXXXXXXXXXXLVDLIFKWSSWNDGVLERXXXXXXXXXXDDKCS 477
L NL+V ++ L LI + N V D
Sbjct: 104 AACAALGNLAVNNENKLLIVEMGG---LEPLINQMMGDNVEVQCNAVGCITNLATRDDNK 160
Query: 478 LEVARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQ 537
++A +G + L LA+S VQ A AL N+ H + N + GA+ LV
Sbjct: 161 HKIATSGALIPLTKLAKSKHIR-VQRNATGALLNMT-HSEENRKEL---VNAGAVPVLVS 215
Query: 538 LTFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGA 597
L S V+ AL N++ D+ NR V S S ++ +A A
Sbjct: 216 LLSSTDPDVQYYCTTALSNIAVDEANRKKLAQTEPRLVSKL-VSLMDSPSSRVKCQATLA 274
Query: 598 LWGLSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALWNLAFNPGNALCIVEGGG 657
L L+ + + I R GG+ L+ L +S + + + + N++ +P N IV+ G
Sbjct: 275 LRNLASDTSYQLEIVRAGGLPHLVKLIQSDSIPLVLASVACIRNISIHPLNEGLIVDAGF 334
Query: 658 VQALIHL 664
++ L+ L
Sbjct: 335 LKPLVRL 341
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 52/183 (28%), Positives = 75/183 (40%)
Query: 501 VQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFD 560
+Q A AL NL N+ N + +E G LE L+ + V+ A G + NL+
Sbjct: 101 IQVAACAALGNLAV----NNENKLLIVEMGGLEPLINQMMGDNVEVQCNAVGCITNLATR 156
Query: 561 DRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPL 620
D N+ +S +Q A GAL ++ SE N + G V L
Sbjct: 157 DDNKHKIATSGALIPLTKLAKS---KHIRVQRNATGALLNMTHSEENRKELVNAGAVPVL 213
Query: 621 IALARSAVVDVHETAAGALWNLAFNPGNA--LCIVEGGGVQALIHLCSSSLSKMARFMAA 678
++L S DV AL N+A + N L E V L+ L S S++ + A
Sbjct: 214 VSLLSSTDPDVQYYCTTALSNIAVDEANRKKLAQTEPRLVSKLVSLMDSPSSRV-KCQAT 272
Query: 679 LAL 681
LAL
Sbjct: 273 LAL 275
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 58/227 (25%), Positives = 90/227 (39%)
Query: 461 ERXXXXXXXXXXDDKCSLEVARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNS 520
ER +DK L+ G + AL L S +Q AA A A + +
Sbjct: 24 EREAVTLLLGYLEDKDQLDFYSGGPLKALTTLVYSDNLN-LQRSAALAFAEI-----TEK 77
Query: 521 NNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXV 580
V E LE ++ L S+ ++ A AL NL+ ++ N+ +
Sbjct: 78 YVRQVSREV--LEPILILLQSQDPQIQVAACAALGNLAVNNENKLLIVEMGGLEPL---I 132
Query: 581 RSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALW 640
+ +Q A G + L+ + N I G + PL LA+S + V A GAL
Sbjct: 133 NQMMGDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLAKSKHIRVQRNATGALL 192
Query: 641 NLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAALALAYI-VD 686
N+ + N +V G V L+ L SS+ ++ AL+ I VD
Sbjct: 193 NMTHSEENRKELVNAGAVPVLVSLLSST-DPDVQYYCTTALSNIAVD 238
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/186 (26%), Positives = 82/186 (44%)
Query: 487 HALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGV 546
H + L S+ + Q+QAA + L + N A + GA++ L+ L S +
Sbjct: 66 HLVSHLDSSYSIDE-QKQAAMEIRLLSKNKPENRIKIA---KAGAIKPLISLISSSDLQL 121
Query: 547 RQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEA 606
++ A+ NLS D N+ VR+ + +E AA AL LS E
Sbjct: 122 QEYGVTAILNLSLCDENKESIASSGAIKPL---VRALKMGTPTAKENAACALLRLSQIEE 178
Query: 607 NSIAIGREGGVAPLIALARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQALIHLCS 666
N +AIGR G + L+ L + + A+ AL++L N + V+ G ++ L+ L +
Sbjct: 179 NKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMA 238
Query: 667 SSLSKM 672
S M
Sbjct: 239 DFGSNM 244
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 146 (56.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 48/159 (30%), Positives = 73/159 (45%)
Query: 532 LEALVQLTFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQ 591
L L + S++ V+ A +L NLS D +N+ ++S S+ Q
Sbjct: 268 LSLLKNMIVSRYSLVQTNALASLVNLSLDKKNKLTIVRLGFVPILIDVLKS---GSREAQ 324
Query: 592 ERAAGALWGLSLSEANSIAIGREGGVAPLIALARSAVVDV--HETAAGALWNLAFNPGNA 649
E AAG ++ LSL + N + IG G + PL+ R+A D H++A AL++L N N
Sbjct: 325 EHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRTRHDSAL-ALYHLTLNQTNR 383
Query: 650 LCIVEGGGVQALIHLCSSSLSKMARFMAALALAYIVDGR 688
+V G V AL + S S + LA +GR
Sbjct: 384 SKLVRLGAVPALFSMVRSGESASRALLVICNLACCSEGR 422
Score = 37 (18.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 5/26 (19%), Positives = 15/26 (57%)
Query: 42 ALSADAMIILQARRLREINVEFCREL 67
++ +D +++ + + V+ CR+L
Sbjct: 44 SVMSDPVVVSSGQTFERVCVQVCRDL 69
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 138 (53.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 51/201 (25%), Positives = 90/201 (44%)
Query: 501 VQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFD 560
V+ AA + +L + S N +G GA+ L+ L +S+ + ++ A AL NLS
Sbjct: 488 VKTAAAAEIRHLTIN--SIENRVHIG-RCGAITPLLSLLYSEEKLTQEHAVTALLNLSIS 544
Query: 561 DRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGG-VAP 619
+ N+ V ++ + +E +A +L+ LS+ + N IG+ +
Sbjct: 545 ELNKAMIVEVGAIEPL---VHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQA 601
Query: 620 LIALARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAAL 679
L+ L + AA AL+NL+ N IV+ V+ L+ L L + + +A L
Sbjct: 602 LVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVDKAVALL 661
Query: 680 A-LAYIVDGRMEDIASIGSSL 699
A L+ + +GR + G L
Sbjct: 662 ANLSAVGEGRQAIVREGGIPL 682
>TAIR|locus:2027082 [details] [associations]
symbol:SKP2A species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0051781 "positive regulation of cell
division" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0071365 "cellular response to auxin stimulus"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0051781
SUPFAM:SSF81383 GO:GO:0010311 EMBL:AC015447 GO:GO:0019005
GO:GO:0071365 GO:GO:0004842 InterPro:IPR006553 SMART:SM00367
GO:GO:0031146 KO:K10268 EMBL:AY058081 EMBL:AY090308 EMBL:AY085898
IPI:IPI00519620 PIR:B86347 RefSeq:NP_564139.1 UniGene:At.25230
ProteinModelPortal:Q9LPL4 SMR:Q9LPL4 IntAct:Q9LPL4 STRING:Q9LPL4
EnsemblPlants:AT1G21410.1 GeneID:838740 KEGG:ath:AT1G21410
TAIR:At1g21410 eggNOG:NOG257455 HOGENOM:HOG000238537
InParanoid:Q9LPL4 OMA:NLNISQC PhylomeDB:Q9LPL4
ProtClustDB:CLSN2687892 Genevestigator:Q9LPL4 Uniprot:Q9LPL4
Length = 360
Score = 131 (51.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 43/151 (28%), Positives = 72/151 (47%)
Query: 12 LDL-RPYKFDTSAAESLSSRCTNLQALWFRGALS----ADAMIILQARRLREINVEFC-R 65
LDL + K + +L+ C +L L G S A A + R+L+ +N+ C +
Sbjct: 122 LDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVK 181
Query: 66 ELTDAIFSAIVARHEMLEILHFGLDVCDRISSDAIKTVAYCCPKLRRLWLSGVREVNGDA 125
+TD AI ++ L+ G C+ IS D + ++AY CP LR L L G + ++
Sbjct: 182 AVTDNALEAIGNNCNQMQSLNLGW--CENISDDGVMSLAYGCPDLRTLDLCGCVLITDES 239
Query: 126 INALAKQCRQLVEVGFIDSGGVDEAALENLS 156
+ ALA C L +G + + A+ +L+
Sbjct: 240 VVALADWCVHLRSLGLYYCRNITDRAMYSLA 270
>TAIR|locus:2166978 [details] [associations]
symbol:AT5G23340 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR InterPro:IPR006553 SMART:SM00367
EMBL:AB007648 eggNOG:NOG300245 KO:K10268 EMBL:AY054268
EMBL:AY133522 EMBL:AK226277 IPI:IPI00524374 RefSeq:NP_197725.1
UniGene:At.21636 UniGene:At.71067 ProteinModelPortal:Q9FMW7
SMR:Q9FMW7 IntAct:Q9FMW7 STRING:Q9FMW7 PaxDb:Q9FMW7 PRIDE:Q9FMW7
EnsemblPlants:AT5G23340.1 GeneID:832398 KEGG:ath:AT5G23340
TAIR:At5g23340 HOGENOM:HOG000030079 InParanoid:Q9FMW7 OMA:DSCEQAG
PhylomeDB:Q9FMW7 ProtClustDB:CLSN2686136 Genevestigator:Q9FMW7
Uniprot:Q9FMW7
Length = 405
Score = 131 (51.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/130 (28%), Positives = 71/130 (54%)
Query: 11 SLDLRPYKFDTSAA-ESLSSRCTNLQALWFRGALS-AD---AMIILQARRLREINVEFCR 65
+L L +F T + +SLS RC +L+AL +G + D A ++ R+++ +++ C
Sbjct: 154 ALHLAGCRFITDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCS 213
Query: 66 ELTDAIFSAIV-ARHEMLEILHFGLDVCDRISSDAIKTVAYCCPKLRRLWLSGVREVNGD 124
+ DA S++ A L+ L LD C ++ +++I ++A C L L + G R+++ +
Sbjct: 214 NVGDAGVSSVAKACASSLKTLKL-LD-CYKVGNESISSLAQFCKNLETLIIGGCRDISDE 271
Query: 125 AINALAKQCR 134
+I LA C+
Sbjct: 272 SIMLLADSCK 281
Score = 130 (50.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 34/121 (28%), Positives = 64/121 (52%)
Query: 38 WFRGALSADAMIILQARR-LREINVEFCRELTDAIFSAIVARHEMLEILHFGLDV--CDR 94
++ G +D +I + + LR +N+ C+ +TD ++I L +L F LDV C +
Sbjct: 81 FYPGVTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASI---GRCLSLLQF-LDVSYCRK 136
Query: 95 ISSDAIKTVAYCCPKLRRLWLSGVREVNGDAINALAKQCRQLVEVGFIDSGGVDEAALEN 154
+S + VA C LR L L+G R + +++ +L+++CR L +G + ++ L +
Sbjct: 137 LSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQGCTNITDSGLAD 196
Query: 155 L 155
L
Sbjct: 197 L 197
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 127 (49.8 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 40/138 (28%), Positives = 63/138 (45%)
Query: 529 TGALEALVQLTFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSSQ 588
T + AL L S++ V+ L NLS + N+ ++ C S
Sbjct: 269 TRVISALKSLIVSRYATVQVNVTAVLVNLSLEKSNKVKIVRSGIVPPLIDVLK-CGSVEA 327
Query: 589 GLQERAAGALWGLSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALWNLAFNPGN 648
QE +AG ++ L+L + N AIG GG+ PL+ L R +A AL++L+ N
Sbjct: 328 --QEHSAGVIFSLALEDENKTAIGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSN 385
Query: 649 ALCIVEGGGVQALIHLCS 666
+V+ G VQ L+ + S
Sbjct: 386 RGKLVKLGAVQMLLGMVS 403
Score = 121 (47.7 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 590 LQERAAGALWGLSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALWNLAFNPGNA 649
+Q L LSL ++N + I R G V PLI + + V+ E +AG +++LA N
Sbjct: 286 VQVNVTAVLVNLSLEKSNKVKIVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALEDENK 345
Query: 650 LCIVEGGGVQALIHLCSSSLSKMARFMAALALAYI 684
I GG++ L+HL +++ R +ALAL ++
Sbjct: 346 TAIGVLGGLEPLLHLIRVG-TELTRHDSALALYHL 379
Score = 50 (22.7 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 10 SSLDLRPYKFDTSAAESLSSRCTNLQ 35
+ LD RP F++S+ ES++S LQ
Sbjct: 178 TELDRRPNYFNSSSDESIASSSRTLQ 203
>MGI|MGI:1918132 [details] [associations]
symbol:Armc3 "armadillo repeat containing 3" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
MGI:MGI:1918132 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AK041744 EMBL:AL929034 IPI:IPI00226920
IPI:IPI00606353 RefSeq:NP_001074552.1 UniGene:Mm.276696
ProteinModelPortal:A2AU72 SMR:A2AU72 PhosphoSite:A2AU72
PaxDb:A2AU72 PRIDE:A2AU72 Ensembl:ENSMUST00000114640 GeneID:70882
KEGG:mmu:70882 UCSC:uc008imd.1 CTD:219681 eggNOG:NOG265712
GeneTree:ENSGT00680000099702 HOGENOM:HOG000231960
HOVERGEN:HBG059366 InParanoid:A2AU72 OMA:LTNMAMQ OrthoDB:EOG47M1XS
NextBio:332490 Bgee:A2AU72 CleanEx:MM_ARMC3 Genevestigator:A2AU72
InterPro:IPR026840 Pfam:PF14381 Uniprot:A2AU72
Length = 881
Score = 129 (50.5 bits), Expect = 0.00020, P = 0.00020
Identities = 76/354 (21%), Positives = 134/354 (37%)
Query: 328 RAAYAVATFVVIDDQNAMVDCQRAEAILRHG-GVRLLLDLARSPP-EGLQSEVAKAIANL 385
R+ Y + + + + + A +L+ G+ L + + L E IAN
Sbjct: 201 RSEYPIIQLLALKTLGVITCDKEARTMLKENQGLDHLTKILETKELNDLHVEALSVIANC 260
Query: 386 SVDSKVAKAVSENGGID-ILADLARSTNRLVAEEVVGGLWNLSVGEDHXXXXXXXXXXXX 444
D + + G + +L+ ST + + + + ++
Sbjct: 261 LEDMDTMVLMQQTGSLKKVLSFAESSTIPDIQKNAAKAIAKAAYDPENRKVFHEQEVEKC 320
Query: 445 LVDLIFKWSSWNDGVLERXXXXXXXXXXDDKCSLEVARAGGVHALVMLARSFMFEGVQEQ 504
LV L+ S +DG + C E G+ +V L RS E V+E
Sbjct: 321 LVTLL---GSDSDGTKIAASQAISALCENLSCK-EFFNTQGIPQIVQLLRSDN-EEVREA 375
Query: 505 AARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDDRNR 564
AA ALANL +N+N AA E A++ L+ + SK +G AA L N++ + R
Sbjct: 376 AALALANLTTSSPANANAAA---EADAIDPLINILSSKRDGAIANAATVLTNMATQEPLR 432
Query: 565 XXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIALA 624
+ S ++ +Q AA + + + GG+ PL+ L
Sbjct: 433 AIIQNHEIMHALLGPLHSTNTL---VQSTAALTVAATACDVEARTQLRNCGGLVPLVGLL 489
Query: 625 RSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAA 678
S +V A+ A+ A + A+ + G + L + + SLS+ +F A
Sbjct: 490 HSKNDEVRRHASWAVMVCAGDEPMAVELCRLGALNILEEI-NRSLSRKNKFSEA 542
>TAIR|locus:2157358 [details] [associations]
symbol:AT5G50900 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 SMART:SM00185 EMBL:CP002688 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AB017063 EMBL:BT020588
EMBL:BT033035 IPI:IPI00519624 RefSeq:NP_199903.1 UniGene:At.25502
ProteinModelPortal:Q9FI58 SMR:Q9FI58 PRIDE:Q9FI58
EnsemblPlants:AT5G50900.1 GeneID:835162 KEGG:ath:AT5G50900
TAIR:At5g50900 InParanoid:Q9FI58 OMA:NFVEENA PhylomeDB:Q9FI58
ProtClustDB:CLSN2687203 Genevestigator:Q9FI58 Uniprot:Q9FI58
Length = 555
Score = 126 (49.4 bits), Expect = 0.00023, P = 0.00023
Identities = 50/193 (25%), Positives = 86/193 (44%)
Query: 500 GVQEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSF 559
GV+ + + A+ +L+ + N + + G + LV+L S ++++ + +S
Sbjct: 157 GVESKNS-AIDSLIELLQEDDKNVMICVAQGVVPVLVRLLDSCSLVMKEKTVAVISRISM 215
Query: 560 DDRNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAP 619
+ ++ +R S S +E+A AL LSLS+ N+ AIG GG++
Sbjct: 216 VESSKHVLIAEGLSLLNHL-LRVLESGSGFAKEKACVALQALSLSKENARAIGCRGGISS 274
Query: 620 LIALARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAAL 679
L+ + + AAG L NLA VE + LI + SS S +A+ A
Sbjct: 275 LLEICQGGSPGSQAFAAGVLRNLALFGETKENFVEENAIFVLISMVSSGTS-LAQENAVG 333
Query: 680 ALAYIVDGRMEDI 692
LA + G ED+
Sbjct: 334 CLANLTSGD-EDL 345
>POMBASE|SPBC354.14c [details] [associations]
symbol:vac8 "vacuolar protein Vac8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000011 "vacuole
inheritance" evidence=ISO] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0000324 "fungal-type vacuole" evidence=ISO]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016236
"macroautophagy" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] [GO:0043495 "protein anchor" evidence=ISO]
[GO:0071255 "CVT vesicle assembly" evidence=ISO] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 PomBase:SPBC354.14c GO:GO:0005794 GO:GO:0043234
GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG5064
GO:GO:0000329 GO:GO:0043495 GO:GO:0000011 HSSP:Q02248 GO:GO:0016236
GO:GO:0042144 KO:K08332 PANTHER:PTHR23315:SF8 PIR:T40294
RefSeq:NP_595238.1 ProteinModelPortal:O43028 STRING:O43028
EnsemblFungi:SPBC354.14c.1 GeneID:2541010 KEGG:spo:SPBC354.14c
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 NextBio:20802124
GO:GO:0071255 Uniprot:O43028
Length = 550
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 52/208 (25%), Positives = 85/208 (40%)
Query: 461 ERXXXXXXXXXXDDKCSLEVARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNS 520
ER +D+ + + AL +LA S + +Q AA A A + +
Sbjct: 24 EREAVADLLSFLEDRNEVNFYSEEPLRALTILAYSDNLD-LQRSAALAFAEI-----TEK 77
Query: 521 NNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXV 580
+ V ET +E ++ L S +++ A+ AL NL+ + N+ +
Sbjct: 78 DVREVDRET--IEPVLFLLQSPDAEIQRAASVALGNLAVNAENKALVVKLNGLDLL---I 132
Query: 581 RSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLIALARSAVVDVHETAAGALW 640
R S +Q A G + L+ + N I G + PL LA+S + V A GAL
Sbjct: 133 RQMMSPHVEVQCNAVGCITNLATLDENKSKIAHSGALGPLTRLAKSKDIRVQRNATGALL 192
Query: 641 NLAFNPGNALCIVEGGGVQALIHLCSSS 668
N+ + N +V G + L+ L SS
Sbjct: 193 NMTHSYENRQQLVSAGTIPVLVSLLPSS 220
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 46/163 (28%), Positives = 72/163 (44%)
Query: 502 QEQAARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDD 561
Q+QAA + L + N A + GA++ LV L S +++ A+ NLS D
Sbjct: 78 QKQAAMEIRLLSKNKPENRIKLA---KAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLCD 134
Query: 562 RNRXXXXXXXXXXXXXXXVRSCSSSSQGLQERAAGALWGLSLSEANSIAIGREGGVAPLI 621
N+ +R + +++ E AA AL LS E N I IGR G + L+
Sbjct: 135 ENKEMIVSSGAVKPLVNALRLGTPTTK---ENAACALLRLSQVEENKITIGRSGAIPLLV 191
Query: 622 ALARSAVVDVHETAAGALWNLAFNPGNALCIVEGGGVQALIHL 664
L + + A+ AL++L N VE G ++ L+ L
Sbjct: 192 NLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVEL 234
>TAIR|locus:2179842 [details] [associations]
symbol:ABAP1 "ARMADILLO BTB protein 1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006261 "DNA-dependent DNA replication"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0031261 "DNA replication
preinitiation complex" evidence=IDA] [GO:0042127 "regulation of
cell proliferation" evidence=IMP] [GO:2000104 "negative regulation
of DNA-dependent DNA replication" evidence=IMP] InterPro:IPR000225
InterPro:IPR000210 InterPro:IPR013069 InterPro:IPR016024
Pfam:PF00514 Pfam:PF00651 PROSITE:PS50097 PROSITE:PS50176
SMART:SM00185 SMART:SM00225 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:FJ422582 EMBL:AL391711
EMBL:AY074524 IPI:IPI00547704 RefSeq:NP_196810.5 UniGene:At.28791
ProteinModelPortal:B7U179 SMR:B7U179 IntAct:B7U179 STRING:B7U179
PRIDE:B7U179 EnsemblPlants:AT5G13060.1 GeneID:831145
KEGG:ath:AT5G13060 TAIR:At5g13060 eggNOG:COG5064
HOGENOM:HOG000030229 InParanoid:Q8RY88 OMA:ASSDIFR PhylomeDB:B7U179
ProtClustDB:CLSN2686776 Genevestigator:B7U179 GO:GO:0031261
GO:GO:0006261 GO:GO:2000104 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Uniprot:B7U179
Length = 737
Score = 132 (51.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 61/239 (25%), Positives = 98/239 (41%)
Query: 457 DGVLERXXXXXXXXXXDD-KCSLEVARAGGVHALVMLARSFMFEGVQEQAARALANLVAH 515
+ V+ R D+ + + GG+ LV L +F VQ AA AL +
Sbjct: 197 NAVIRRAADIITNIAHDNPRIKTNIRVEGGIAPLVELL-NFPDVKVQRAAAGALRTVSFR 255
Query: 516 GDSNSNNAAVGLETGALEALVQLTFSKHEGVRQEAAGALWNLSFDDRNRXXXXXXXXXXX 575
D N + +E AL LV + S+ V EA GA+ NL +
Sbjct: 256 NDENKSQI---VELNALPTLVLMLQSQDSTVHGEAIGAIGNLVHSSPD--IKKEVIRAGA 310
Query: 576 XXXXVRSCSSSSQGLQERAAGALWGLSLSEAN-SIAIGREGGVAPLIALARSAVVDVHET 634
+ SS+ Q AA + + +++ + I + G + PLI + S+ V E
Sbjct: 311 LQPVIGLLSSTCLETQREAALLIGQFAAPDSDCKVHIAQRGAITPLIKMLESSDEQVVEM 370
Query: 635 AAGALWNLAFNPGNALCIVEGGGVQALIHLCSSSLSKMARFMAALALAYIVDGRMEDIA 693
+A AL LA + N I GG+ +L++L + + AA AL + D E++A
Sbjct: 371 SAFALGRLAQDAHNQAGIAHRGGIISLLNLLDVKTGSV-QHNAAFALYGLADNE-ENVA 427
Score = 42 (19.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 333 VATFVVIDDQNAMVDCQRAEAILRHGGVRLLLDLARSPPE---GLQSEVAKAIANLS-VD 388
V + IDD+ +D AI RH V L+ + S P+ E A IA+L+ +D
Sbjct: 60 VTQLIDIDDEP--IDL--VVAIRRHVEV---LNSSFSDPDFDHEAVKEAAADIADLAKID 112
Query: 389 SKVAKAVSENGGIDIL 404
V + + ENG I L
Sbjct: 113 ENV-EIIVENGAIPAL 127
>TAIR|locus:2056529 [details] [associations]
symbol:AT2G05810 "AT2G05810" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 SMART:SM00185
EMBL:CP002685 GenomeReviews:CT485783_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC006555 EMBL:AY099770
EMBL:BT015173 IPI:IPI00537341 PIR:F84471 RefSeq:NP_178638.1
RefSeq:NP_849939.1 UniGene:At.13408 UniGene:At.75216
ProteinModelPortal:Q8S8G1 SMR:Q8S8G1 EnsemblPlants:AT2G05810.1
EnsemblPlants:AT2G05810.2 GeneID:815132 KEGG:ath:AT2G05810
TAIR:At2g05810 eggNOG:NOG247895 HOGENOM:HOG000243018
InParanoid:Q8S8G1 OMA:WSQNPLL PhylomeDB:Q8S8G1
ProtClustDB:CLSN2683236 ArrayExpress:Q8S8G1 Genevestigator:Q8S8G1
Uniprot:Q8S8G1
Length = 580
Score = 124 (48.7 bits), Expect = 0.00040, P = 0.00040
Identities = 63/277 (22%), Positives = 104/277 (37%)
Query: 352 EAILRHGGVRLLLDLARSPPEGLQSEVAKAIANLSVDSKVAKAVSENGGIDILADLARST 411
+ + GG+ LL L + ++ A AI ++ D A A+S GG+ +L + RS
Sbjct: 238 KTVFEQGGLGPLLRLLETGSSPFKTRAAIAIEAITADPATAWAISAYGGVTVLIEACRSG 297
Query: 412 NRLVAEEVVGGLWNLSVGEDHXXXXXXXXXXXXLVDLIFKWSSWNDGVLERXXXXXXXXX 471
++ V E + G + N++ E+ L+ L+ SS V E+
Sbjct: 298 SKQVQEHIAGAISNIAAVEEIRTTLAEEGAIPVLIQLLISGSS---SVQEKTANFISLIS 354
Query: 472 XDDKC--SLEVARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLET 529
+ L V GG+ L+ L + E AL+ + A + + + T
Sbjct: 355 SSGEYYRDLIVRERGGLQILIHLVQESSNPDTIEHCLLALSQISA---METVSRVLSSST 411
Query: 530 GALEALVQLTFSKHEGV--RQEAAGALWNLSFDDRNRXXXXXXXXXXXXXXXVRSCSSSS 587
+ L +L KH V +Q + L NL+ D N+ S
Sbjct: 412 RFIIRLGELI--KHGNVILQQISTSLLSNLTISDGNKRAVADCLSSLIRLME----SPKP 465
Query: 588 QGLQERAAGALWGLSLSEANSIAIGR-EGGVAPLIAL 623
GLQE A A L +N + R E V L+ +
Sbjct: 466 AGLQEAATEAAKSLLTVRSNRKELMRDEKSVIRLVQM 502
>TAIR|locus:2201205 [details] [associations]
symbol:AT1G23180 "AT1G23180" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 InterPro:IPR019308
PANTHER:PTHR13448 EMBL:BT002042 EMBL:BT008799 EMBL:AK226976
IPI:IPI00522633 RefSeq:NP_173731.2 UniGene:At.43289
UniGene:At.50936 ProteinModelPortal:Q8H0U3 SMR:Q8H0U3 PRIDE:Q8H0U3
ProMEX:Q8H0U3 EnsemblPlants:AT1G23180.1 GeneID:838926
KEGG:ath:AT1G23180 TAIR:At1g23180 HOGENOM:HOG000029826
InParanoid:Q8H0U3 OMA:LGGKKCI PhylomeDB:Q8H0U3 ArrayExpress:Q8H0U3
Genevestigator:Q8H0U3 Uniprot:Q8H0U3
Length = 834
Score = 90 (36.7 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 25/83 (30%), Positives = 49/83 (59%)
Query: 352 EAILR-HGGVRLLLDLARSPPEGLQSEVAKAIANLSVDSKVAKAVSENGGID-ILADLAR 409
+AI++ HG + L+++L +S A I +++ + ++V+E+G ++ I A L+R
Sbjct: 140 DAIMQFHGCLNLIVNLLKSESSSACEAAAGLIRSIASVNLYRESVAESGALEEITALLSR 199
Query: 410 -STNRLVAEEVVGGLWNLSVGED 431
S +V E+ + LWNL+V E+
Sbjct: 200 PSLATVVKEQCICALWNLTVDEE 222
Score = 65 (27.9 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 25/86 (29%), Positives = 37/86 (43%)
Query: 585 SSSQGLQERAAGALWGLSLSEA--NSI-AIGREGGVAPLIALARSAVVDVHETAAGALWN 641
SSS +E A L + +SE SI + +GG+ PL+ L E + L+N
Sbjct: 733 SSSPETKEAAVLELNKI-VSEGVPESIQTLASQGGIEPLVKLLEERNERCVEASLSVLYN 791
Query: 642 LAFNPGNALCIVEGGGVQALIHLCSS 667
L + N I+ G V L + S
Sbjct: 792 LTMDSENHTAIIRAGAVPVLRRIVMS 817
Score = 64 (27.6 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 492 LARSFMFEGVQEQ-AARALANLVAHGDSNSNNAAVGLETGALEALVQLTFSKH-EGVRQE 549
+AR + G+ ++ AA A +A N + +E GA++ LVQL + + E V+
Sbjct: 427 VARLVLILGLADELAATRAAESIADASINEDMRVSFMEAGAVKPLVQLLANNNKETVKLP 486
Query: 550 AAGALWNLS 558
AL NLS
Sbjct: 487 VIRALKNLS 495
>RGD|620734 [details] [associations]
symbol:Ctnnd2 "catenin (cadherin-associated protein), delta 2"
species:10116 "Rattus norvegicus" [GO:0001763 "morphogenesis of a
branching structure" evidence=IEA;ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005912 "adherens junction" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007612
"learning" evidence=IEA;ISO] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0048167 "regulation of synaptic plasticity" evidence=IEA;ISO]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 RGD:620734 GO:GO:0007275 GO:GO:0005634 GO:GO:0048167
GO:GO:0014069 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0006355 GO:GO:0007612 GO:GO:0007155 GO:GO:0006351
GO:GO:0005912 eggNOG:NOG276924 GO:GO:0001763 OrthoDB:EOG4S4PFC
HOGENOM:HOG000231863 EMBL:AB008752 IPI:IPI00767190 UniGene:Rn.15163
ProteinModelPortal:O35116 MINT:MINT-87323 STRING:O35116
PhosphoSite:O35116 UCSC:RGD:620734 InParanoid:O35116
ArrayExpress:O35116 Genevestigator:O35116
GermOnline:ENSRNOG00000010649 Uniprot:O35116
Length = 264
Score = 117 (46.2 bits), Expect = 0.00058, P = 0.00058
Identities = 34/90 (37%), Positives = 45/90 (50%)
Query: 473 DDKCSLEVARAGGVHALVMLARSFMFEGVQEQAARALANLVAHGDSNSNNAAVGLETGAL 532
D+K E+ R GG+ LV L M E V A AL NLV +G +N +N G +
Sbjct: 19 DNKIKAEIRRQGGIQLLVDLLDHRMTE-VHRSACGALRNLV-YGKANDDNKIALKNCGGI 76
Query: 533 EALVQLTFSKHE-GVRQEAAGALWNLSFDD 561
ALV+L + +R+ G LWNLS D
Sbjct: 77 PALVRLLRKTTDLEIRELVTGVLWNLSSCD 106
>RGD|1305813 [details] [associations]
symbol:Fbxl7 "F-box and leucine-rich repeat protein 7"
species:10116 "Rattus norvegicus" [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007067 "mitosis" evidence=IEA;ISO]
[GO:0008283 "cell proliferation" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
RGD:1305813 GO:GO:0005813 GO:GO:0000086 GO:GO:0007067 GO:GO:0008283
SUPFAM:SSF81383 GO:GO:0019005 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0031146 IPI:IPI00373157
Ensembl:ENSRNOT00000031170 Uniprot:F1M6W6
Length = 449
Score = 121 (47.7 bits), Expect = 0.00058, P = 0.00058
Identities = 40/168 (23%), Positives = 78/168 (46%)
Query: 12 LDLRP-YKFDTSAAESLSSRCTNLQALWFRGA--LSADAM--IILQARRLREINVEFCRE 66
LD+ + + ++++ CT L L+ R L+ + + +++ ++E++V CR
Sbjct: 235 LDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCTSIKELSVSDCRF 294
Query: 67 LTDAIFSAIVARHEMLEILHFGLDVCDRISSDAIKTVAYCCPKLRRLWLSGVREVNGDAI 126
++D I L L + C RI+ I+ VA C KLR L G + +
Sbjct: 295 VSDFGLREIAKLESRLRYL--SIAHCGRITDVGIRYVAKYCSKLRYLNARGCEGITDHGV 352
Query: 127 NALAKQCRQL--VEVG---FIDSGGVDEAALENLSSVRYLSIAGTRNL 169
LAK C +L +++G + G++ AL N +++ LS+ ++
Sbjct: 353 EYLAKNCTKLKSLDIGKCPLVSDTGLESLAL-NCFNLKRLSLKSCESI 399
>MGI|MGI:3052506 [details] [associations]
symbol:Fbxl7 "F-box and leucine-rich repeat protein 7"
species:10090 "Mus musculus" [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 PROSITE:PS51450 SMART:SM00256
UniPathway:UPA00143 MGI:MGI:3052506 GO:GO:0005737 GO:GO:0005813
GO:GO:0000086 GO:GO:0051301 GO:GO:0007067 GO:GO:0008283
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0019005
GeneTree:ENSGT00700000104023 InterPro:IPR006553 SMART:SM00367
GO:GO:0031146 HSSP:Q13309 eggNOG:NOG259371 HOGENOM:HOG000116328
HOVERGEN:HBG051591 KO:K10273 OMA:LMLETVI OrthoDB:EOG495ZRQ
CTD:23194 EMBL:AK129227 EMBL:BC091646 IPI:IPI00420560
RefSeq:NP_795933.2 UniGene:Mm.253378 ProteinModelPortal:Q5BJ29
SMR:Q5BJ29 STRING:Q5BJ29 PhosphoSite:Q5BJ29 PRIDE:Q5BJ29
Ensembl:ENSMUST00000059204 GeneID:448987 KEGG:mmu:448987
UCSC:uc007vjn.1 InParanoid:Q5BJ29 NextBio:410960 Bgee:Q5BJ29
CleanEx:MM_FBXL7 Genevestigator:Q5BJ29 Uniprot:Q5BJ29
Length = 491
Score = 121 (47.7 bits), Expect = 0.00067, P = 0.00067
Identities = 40/168 (23%), Positives = 78/168 (46%)
Query: 12 LDLRP-YKFDTSAAESLSSRCTNLQALWFRGA--LSADAM--IILQARRLREINVEFCRE 66
LD+ + + ++++ CT L L+ R L+ + + +++ ++E++V CR
Sbjct: 277 LDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCTSIKELSVSDCRF 336
Query: 67 LTDAIFSAIVARHEMLEILHFGLDVCDRISSDAIKTVAYCCPKLRRLWLSGVREVNGDAI 126
++D I L L + C RI+ I+ VA C KLR L G + +
Sbjct: 337 VSDFGLREIAKLESRLRYL--SIAHCGRITDVGIRYVAKYCSKLRYLNARGCEGITDHGV 394
Query: 127 NALAKQCRQL--VEVG---FIDSGGVDEAALENLSSVRYLSIAGTRNL 169
LAK C +L +++G + G++ AL N +++ LS+ ++
Sbjct: 395 EYLAKNCTKLKSLDIGKCPLVSDTGLESLAL-NCFNLKRLSLKSCESI 441
>UNIPROTKB|F1NF36 [details] [associations]
symbol:FBXL15 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] GO:GO:0005737 GO:GO:0000086 GO:GO:0030513
GO:GO:0019005 GO:GO:0004842 GO:GO:0031146
GeneTree:ENSGT00700000104313 OMA:CEWVDSL EMBL:AADN02027809
IPI:IPI00593325 Ensembl:ENSGALT00000009116 Uniprot:F1NF36
Length = 296
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 34/133 (25%), Positives = 61/133 (45%)
Query: 27 LSSRCTNLQALWFRGALSADAMIIL----QARRLREINVEFCRELTDAIFSAIVARHEML 82
+S C NL+ L D++ + + + L +++ CR+L D +V + L
Sbjct: 132 ISLNCPNLRRLSLAHCEWVDSLSLRSLADRCKALEAVDLTACRQLKDEAICYLVQKCSRL 191
Query: 83 EILHFGLDVCDRISSDAIKTVAYCCPKLRRLWLSGVREVNGDAINALAKQCRQLVEVGFI 142
+ L ++ + A++ A CCP+L L L+G V D+I LA+ C +L +
Sbjct: 192 KSLSLAVNA--NVGDVAVEETAKCCPELEHLDLTGCLRVKNDSIRVLAEYCPKLRSLKVK 249
Query: 143 DSGGVDEAALENL 155
V E++L L
Sbjct: 250 HCHNVAESSLSVL 262
>MGI|MGI:1354704 [details] [associations]
symbol:Fbxl17 "F-box and leucine-rich repeat protein 17"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001810
Pfam:PF00646 PROSITE:PS50181 SMART:SM00256 MGI:MGI:1354704
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 EMBL:CH466537
EMBL:BC058120 EMBL:BC138330 EMBL:BC138331 EMBL:AF176529
EMBL:AK004419 IPI:IPI00348513 IPI:IPI00403922 RefSeq:NP_056609.1
UniGene:Mm.136366 ProteinModelPortal:Q9QZN1 SMR:Q9QZN1
STRING:Q9QZN1 PhosphoSite:Q9QZN1 PRIDE:Q9QZN1
Ensembl:ENSMUST00000024761 GeneID:50758 KEGG:mmu:50758
UCSC:uc008dfj.2 UCSC:uc008dfl.2 CTD:64839 eggNOG:NOG317782
HOGENOM:HOG000169154 HOVERGEN:HBG107935 InParanoid:Q9QZN1 KO:K10283
OMA:PASECAP OrthoDB:EOG4BK54B ChiTaRS:FBXL17 NextBio:307645
Bgee:Q9QZN1 CleanEx:MM_FBXL17 Genevestigator:Q9QZN1
GermOnline:ENSMUSG00000023965 Uniprot:Q9QZN1
Length = 701
Score = 122 (48.0 bits), Expect = 0.00086, P = 0.00086
Identities = 39/147 (26%), Positives = 74/147 (50%)
Query: 27 LSSRCTNL-QALWFRGALSADAMIILQARR---LREINVEFCRELTDAIFSAIVARHEML 82
L+ +C L + +R +D II A L++++V +LTD + +R L
Sbjct: 407 LAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSRCREL 466
Query: 83 EILHFGLDVCDRISSDAIKTVAYCCPKLRRLWLSGVREVNGDAINALAKQCRQLVEVGFI 142
+ +HFG C +IS + + +A C KL+R+++ + V ++ A A+ C +L VGF+
Sbjct: 467 KDIHFGQ--CYKISDEGMIVIAKSCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFM 524
Query: 143 DSGGVDEAALENLSSVRYLSIAGTRNL 169
+ + +L+ +R LS R++
Sbjct: 525 GCSVTSKGVI-HLTKLRNLSSLDLRHI 550
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.132 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 864 783 0.00095 121 3 11 22 0.37 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 629 (67 KB)
Total size of DFA: 381 KB (2185 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.09u 0.20s 53.29t Elapsed: 00:00:03
Total cpu time: 53.09u 0.20s 53.29t Elapsed: 00:00:03
Start: Tue May 21 01:28:56 2013 End: Tue May 21 01:28:59 2013