Query 048761
Match_columns 221
No_of_seqs 307 out of 1664
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 22:39:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048761.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048761hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 1.5E-48 5E-53 325.9 20.8 193 22-218 1-200 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 1E-30 3.5E-35 242.1 15.7 140 74-215 302-444 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 6E-30 2.1E-34 238.5 16.9 139 74-214 337-478 (496)
4 3qac_A 11S globulin SEED stora 100.0 4.5E-30 1.5E-34 237.8 14.2 140 74-215 302-444 (465)
5 2e9q_A 11S globulin subunit be 100.0 1.5E-29 5.2E-34 234.5 15.2 145 69-215 295-443 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 5.9E-29 2E-33 232.2 14.8 144 70-215 368-515 (531)
7 2cav_A Protein (canavalin); vi 100.0 1.5E-28 5E-33 227.4 16.0 156 58-216 244-414 (445)
8 1uij_A Beta subunit of beta co 100.0 2.5E-28 8.6E-33 224.1 16.0 156 58-216 212-385 (416)
9 3c3v_A Arachin ARAH3 isoform; 100.0 4.7E-28 1.6E-32 226.5 17.0 145 69-215 345-493 (510)
10 1fxz_A Glycinin G1; proglycini 100.0 7.8E-28 2.7E-32 224.0 17.6 144 70-215 312-459 (476)
11 2ea7_A 7S globulin-1; beta bar 100.0 5.9E-28 2E-32 222.7 15.9 157 56-215 227-400 (434)
12 2d5f_A Glycinin A3B4 subunit; 100.0 5.8E-28 2E-32 225.7 14.7 146 68-216 339-486 (493)
13 3s7i_A Allergen ARA H 1, clone 99.9 2.6E-27 8.9E-32 217.3 13.8 155 59-216 226-410 (418)
14 1dgw_A Canavalin; duplicated s 99.9 1.5E-26 5.1E-31 189.5 14.8 149 61-214 4-167 (178)
15 2e9q_A 11S globulin subunit be 99.9 6.5E-25 2.2E-29 203.5 14.6 140 74-216 43-237 (459)
16 2phl_A Phaseolin; plant SEED s 99.9 5.5E-25 1.9E-29 200.7 13.6 133 74-215 224-372 (397)
17 2vqa_A SLL1358 protein, MNCA; 99.9 9.1E-24 3.1E-28 188.8 19.1 160 53-216 194-353 (361)
18 1fxz_A Glycinin G1; proglycini 99.9 3E-24 1E-28 199.9 14.1 140 74-216 28-229 (476)
19 2ea7_A 7S globulin-1; beta bar 99.9 1E-23 3.5E-28 194.4 15.9 138 74-214 37-188 (434)
20 2cav_A Protein (canavalin); vi 99.9 1.2E-23 4.1E-28 194.5 16.4 138 74-214 62-212 (445)
21 3ksc_A LEGA class, prolegumin; 99.9 6.1E-24 2.1E-28 198.1 14.3 133 78-212 29-214 (496)
22 1uij_A Beta subunit of beta co 99.9 8.5E-24 2.9E-28 194.1 13.9 139 74-215 25-177 (416)
23 2d5f_A Glycinin A3B4 subunit; 99.9 3.2E-23 1.1E-27 193.7 14.6 138 77-216 27-232 (493)
24 3qac_A 11S globulin SEED stora 99.9 3.3E-23 1.1E-27 191.8 14.5 140 74-216 30-239 (465)
25 2phl_A Phaseolin; plant SEED s 99.9 3.1E-23 1.1E-27 189.1 13.1 136 74-212 28-181 (397)
26 3s7i_A Allergen ARA H 1, clone 99.9 7.6E-23 2.6E-27 187.7 15.1 135 74-213 20-169 (418)
27 3c3v_A Arachin ARAH3 isoform; 99.9 2.6E-22 9E-27 187.8 14.5 138 77-216 30-271 (510)
28 3kgl_A Cruciferin; 11S SEED gl 99.9 7.1E-22 2.4E-26 183.0 13.9 140 74-216 23-247 (466)
29 3fz3_A Prunin; TREE NUT allerg 99.9 7.8E-22 2.7E-26 184.3 14.1 140 74-216 28-299 (531)
30 2vqa_A SLL1358 protein, MNCA; 99.9 2.4E-20 8.4E-25 166.5 18.2 150 61-215 21-173 (361)
31 1j58_A YVRK protein; cupin, de 99.8 7.5E-19 2.6E-23 158.4 18.8 156 57-217 222-377 (385)
32 1j58_A YVRK protein; cupin, de 99.8 6.9E-19 2.4E-23 158.6 13.7 148 61-214 48-197 (385)
33 1dgw_X Canavalin; duplicated s 99.7 9.5E-18 3.3E-22 120.4 6.3 75 63-137 4-78 (79)
34 3h8u_A Uncharacterized conserv 99.6 6.5E-15 2.2E-19 112.0 11.1 85 94-182 38-122 (125)
35 3ibm_A Cupin 2, conserved barr 99.5 1.6E-13 5.3E-18 110.9 14.2 116 54-176 12-132 (167)
36 2fqp_A Hypothetical protein BP 99.5 3.6E-14 1.2E-18 104.0 8.7 77 93-173 16-93 (97)
37 3l2h_A Putative sugar phosphat 99.5 8.9E-14 3E-18 110.7 11.3 80 94-178 45-126 (162)
38 1v70_A Probable antibiotics sy 99.5 1.2E-13 4E-18 100.3 10.3 79 92-175 25-103 (105)
39 3lag_A Uncharacterized protein 99.5 1.6E-14 5.3E-19 107.1 5.6 79 92-172 14-92 (98)
40 2xlg_A SLL1785 protein, CUCA; 99.5 4.4E-14 1.5E-18 120.7 9.1 82 92-173 40-137 (239)
41 2oa2_A BH2720 protein; 1017534 99.5 5.8E-13 2E-17 104.8 12.5 84 93-176 41-125 (148)
42 3es1_A Cupin 2, conserved barr 99.5 1.9E-13 6.5E-18 111.4 9.9 80 93-178 77-156 (172)
43 1x82_A Glucose-6-phosphate iso 99.5 1.3E-12 4.5E-17 107.5 14.5 84 93-176 65-156 (190)
44 3i7d_A Sugar phosphate isomera 99.5 3.5E-13 1.2E-17 108.3 10.8 81 93-178 41-124 (163)
45 2gu9_A Tetracenomycin polyketi 99.5 6.6E-13 2.3E-17 98.0 11.2 78 93-175 19-98 (113)
46 3ht1_A REMF protein; cupin fol 99.4 3.2E-13 1.1E-17 104.5 9.6 83 93-181 37-121 (145)
47 1lr5_A Auxin binding protein 1 99.4 6.9E-13 2.3E-17 105.7 11.1 82 94-176 40-126 (163)
48 3fjs_A Uncharacterized protein 99.4 4.7E-13 1.6E-17 101.2 9.0 76 92-173 33-108 (114)
49 4e2g_A Cupin 2 conserved barre 99.4 8.3E-13 2.8E-17 100.2 9.6 77 93-176 39-115 (126)
50 2ozi_A Hypothetical protein RP 99.4 2.8E-13 9.4E-18 100.6 6.6 79 93-173 15-93 (98)
51 1o4t_A Putative oxalate decarb 99.4 1.2E-12 4.2E-17 101.3 10.1 77 92-173 54-130 (133)
52 2bnm_A Epoxidase; oxidoreducta 99.4 2.2E-12 7.6E-17 105.4 12.1 82 90-173 112-197 (198)
53 3jzv_A Uncharacterized protein 99.4 2.5E-12 8.4E-17 104.0 12.1 78 93-176 51-128 (166)
54 3kgz_A Cupin 2 conserved barre 99.4 1.5E-12 5.3E-17 104.1 10.6 79 93-177 42-120 (156)
55 2b8m_A Hypothetical protein MJ 99.4 2.3E-12 7.7E-17 96.8 10.5 75 94-174 26-101 (117)
56 2pfw_A Cupin 2, conserved barr 99.4 3.6E-12 1.2E-16 95.2 9.7 76 94-177 33-108 (116)
57 1vj2_A Novel manganese-contain 99.3 2.2E-12 7.4E-17 98.7 8.3 78 92-175 45-122 (126)
58 2f4p_A Hypothetical protein TM 99.3 1.1E-11 3.9E-16 97.6 12.1 79 93-176 46-124 (147)
59 4i4a_A Similar to unknown prot 99.3 9.4E-12 3.2E-16 94.6 11.2 76 93-174 32-107 (128)
60 3cew_A Uncharacterized cupin p 99.3 5.1E-12 1.7E-16 96.1 9.4 80 92-176 23-103 (125)
61 2vpv_A Protein MIF2, MIF2P; nu 99.3 5.7E-12 1.9E-16 102.1 9.4 76 94-174 87-163 (166)
62 1yhf_A Hypothetical protein SP 99.3 1.1E-11 3.6E-16 92.5 10.2 74 93-174 38-111 (115)
63 2o8q_A Hypothetical protein; c 99.3 7.5E-12 2.6E-16 96.1 9.6 77 95-176 43-119 (134)
64 1y9q_A Transcriptional regulat 99.3 9E-12 3.1E-16 101.5 10.0 78 91-175 100-179 (192)
65 1rc6_A Hypothetical protein YL 99.3 7.6E-12 2.6E-16 107.2 9.4 78 92-174 176-254 (261)
66 3h7j_A Bacilysin biosynthesis 99.3 1.4E-11 4.7E-16 104.7 9.9 78 94-177 144-222 (243)
67 2q30_A Uncharacterized protein 99.2 3.2E-11 1.1E-15 88.7 9.3 76 93-174 31-107 (110)
68 2ozj_A Cupin 2, conserved barr 99.2 4.3E-11 1.5E-15 89.3 9.9 73 94-174 37-109 (114)
69 1sef_A Conserved hypothetical 99.2 8.6E-11 2.9E-15 101.5 12.4 76 93-174 180-257 (274)
70 1y3t_A Hypothetical protein YX 99.2 6.9E-11 2.4E-15 103.6 10.7 78 93-176 44-121 (337)
71 1sfn_A Conserved hypothetical 99.2 2.2E-10 7.6E-15 97.6 12.5 77 92-174 162-239 (246)
72 1juh_A Quercetin 2,3-dioxygena 99.2 1.9E-10 6.4E-15 102.9 12.3 80 94-175 47-129 (350)
73 1sq4_A GLXB, glyoxylate-induce 99.2 8.2E-11 2.8E-15 102.2 9.6 76 93-174 66-143 (278)
74 4e2q_A Ureidoglycine aminohydr 99.2 1E-10 3.4E-15 101.3 9.7 108 51-174 35-142 (266)
75 3lwc_A Uncharacterized protein 99.2 8E-11 2.7E-15 90.0 8.1 73 94-174 39-111 (119)
76 3h7j_A Bacilysin biosynthesis 99.2 8.3E-11 2.8E-15 99.8 8.8 74 95-174 34-108 (243)
77 2d40_A Z3393, putative gentisa 99.2 1.3E-10 4.3E-15 104.3 10.4 77 93-174 98-174 (354)
78 2opk_A Hypothetical protein; p 99.1 3.3E-10 1.1E-14 85.3 10.7 78 92-174 28-109 (112)
79 2i45_A Hypothetical protein; n 99.1 1.2E-10 4.2E-15 86.0 8.1 68 97-172 30-98 (107)
80 1rc6_A Hypothetical protein YL 99.1 1.3E-10 4.5E-15 99.5 9.3 77 93-174 57-134 (261)
81 2pyt_A Ethanolamine utilizatio 99.1 1.5E-10 5.2E-15 90.2 7.6 72 94-175 56-127 (133)
82 4b29_A Dimethylsulfoniopropion 99.1 2.6E-10 8.9E-15 95.7 9.4 78 92-175 129-206 (217)
83 1y3t_A Hypothetical protein YX 99.1 4.6E-10 1.6E-14 98.3 11.5 74 97-176 219-293 (337)
84 1sef_A Conserved hypothetical 99.1 2.2E-10 7.7E-15 98.9 8.9 77 93-174 60-137 (274)
85 3rns_A Cupin 2 conserved barre 99.1 3E-10 1E-14 95.5 9.0 73 94-173 152-224 (227)
86 3rns_A Cupin 2 conserved barre 99.1 6.1E-10 2.1E-14 93.6 10.4 74 94-175 36-109 (227)
87 3d82_A Cupin 2, conserved barr 99.1 4.7E-10 1.6E-14 81.3 8.3 59 106-171 40-98 (102)
88 3bu7_A Gentisate 1,2-dioxygena 99.1 8.3E-10 2.8E-14 100.4 11.6 78 92-174 120-198 (394)
89 2d40_A Z3393, putative gentisa 99.1 8.9E-10 3E-14 98.8 11.4 91 74-174 248-339 (354)
90 4e2q_A Ureidoglycine aminohydr 99.1 1.1E-09 3.9E-14 94.7 11.6 77 92-174 183-260 (266)
91 1sq4_A GLXB, glyoxylate-induce 99.1 7.8E-10 2.7E-14 96.0 10.7 86 88-179 184-271 (278)
92 4h7l_A Uncharacterized protein 99.1 5.5E-10 1.9E-14 89.5 8.7 70 95-175 47-118 (157)
93 3bu7_A Gentisate 1,2-dioxygena 99.0 3E-09 1E-13 96.8 13.9 76 93-174 292-368 (394)
94 3nw4_A Gentisate 1,2-dioxygena 99.0 5.6E-10 1.9E-14 100.7 9.0 78 92-174 100-177 (368)
95 4axo_A EUTQ, ethanolamine util 99.0 2.1E-09 7.1E-14 85.7 10.7 87 75-175 50-136 (151)
96 1vr3_A Acireductone dioxygenas 99.0 6.6E-09 2.2E-13 85.8 12.4 84 96-181 75-168 (191)
97 1dgw_Y Canavalin; duplicated s 98.9 2.1E-08 7.1E-13 73.6 10.6 74 139-215 6-83 (93)
98 1o5u_A Novel thermotoga mariti 98.8 5.4E-09 1.9E-13 77.6 6.3 64 99-169 35-98 (101)
99 3ebr_A Uncharacterized RMLC-li 98.8 2E-08 6.8E-13 80.5 9.6 88 75-175 27-116 (159)
100 1sfn_A Conserved hypothetical 98.8 9.2E-09 3.1E-13 87.5 8.1 72 93-174 48-119 (246)
101 2q1z_B Anti-sigma factor CHRR, 98.8 1.5E-08 5.2E-13 83.6 9.2 70 95-174 125-194 (195)
102 1zrr_A E-2/E-2' protein; nicke 98.8 7.2E-09 2.5E-13 84.7 5.5 67 108-176 93-159 (179)
103 3cjx_A Protein of unknown func 98.8 3.3E-08 1.1E-12 79.8 9.1 74 94-174 42-117 (165)
104 3bcw_A Uncharacterized protein 98.7 1.3E-08 4.4E-13 78.2 6.1 67 94-166 48-114 (123)
105 2y0o_A Probable D-lyxose ketol 98.7 5.5E-08 1.9E-12 79.2 9.7 79 94-176 52-154 (175)
106 2o1q_A Putative acetyl/propion 98.7 9.8E-09 3.4E-13 80.8 4.6 76 94-176 43-120 (145)
107 1juh_A Quercetin 2,3-dioxygena 98.7 9.9E-08 3.4E-12 85.2 11.6 79 89-174 243-325 (350)
108 1yfu_A 3-hydroxyanthranilate-3 98.7 1.2E-07 4.1E-12 76.7 11.0 67 94-163 35-101 (174)
109 3eqe_A Putative cystein deoxyg 98.7 4.2E-07 1.4E-11 73.7 13.2 85 94-178 68-156 (171)
110 3bal_A Acetylacetone-cleaving 98.6 6.8E-08 2.3E-12 77.0 7.0 105 56-174 14-120 (153)
111 3st7_A Capsular polysaccharide 98.6 3.9E-07 1.3E-11 80.3 11.3 84 96-181 273-365 (369)
112 3d0j_A Uncharacterized protein 98.5 3.7E-07 1.3E-11 71.4 8.0 76 95-172 25-107 (140)
113 2gm6_A Cysteine dioxygenase ty 98.5 2.2E-06 7.5E-11 71.4 12.9 81 94-175 78-167 (208)
114 1zvf_A 3-hydroxyanthranilate 3 98.5 7.6E-07 2.6E-11 72.1 9.5 58 103-162 42-103 (176)
115 3nw4_A Gentisate 1,2-dioxygena 98.4 9.6E-07 3.3E-11 79.5 10.8 89 76-174 260-350 (368)
116 2arc_A ARAC, arabinose operon 98.4 2.1E-06 7.3E-11 66.5 10.2 71 97-173 15-91 (164)
117 3o14_A Anti-ecfsigma factor, C 98.3 2.1E-06 7.3E-11 72.3 9.5 84 75-174 27-110 (223)
118 2qnk_A 3-hydroxyanthranilate 3 98.3 2.1E-06 7.2E-11 74.3 9.2 65 104-172 40-104 (286)
119 3eln_A Cysteine dioxygenase ty 98.3 1.5E-05 5.1E-10 66.0 13.0 85 94-178 69-162 (200)
120 3myx_A Uncharacterized protein 97.9 5.5E-05 1.9E-09 64.2 10.5 72 94-174 46-117 (238)
121 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.9 0.00014 4.7E-09 57.0 11.8 96 75-174 16-113 (141)
122 1yud_A Hypothetical protein SO 97.9 0.00034 1.2E-08 56.4 13.9 131 74-212 27-165 (170)
123 3uss_A Putative uncharacterize 97.9 0.00033 1.1E-08 58.4 13.8 83 94-177 72-163 (211)
124 3ejk_A DTDP sugar isomerase; Y 97.8 0.0003 1E-08 57.0 12.4 74 101-174 59-141 (174)
125 3es4_A Uncharacterized protein 97.7 0.00013 4.6E-09 55.3 7.7 62 95-162 42-103 (116)
126 3gbg_A TCP pilus virulence reg 97.7 0.00026 8.9E-09 59.7 10.0 72 94-170 6-82 (276)
127 3myx_A Uncharacterized protein 97.6 0.00033 1.1E-08 59.4 9.5 63 94-162 166-228 (238)
128 2vec_A YHAK, pirin-like protei 97.4 0.00091 3.1E-08 57.3 10.1 74 97-174 66-142 (256)
129 1tq5_A Protein YHHW; bicupin, 97.1 0.0034 1.2E-07 53.2 10.0 75 96-174 42-119 (242)
130 3o14_A Anti-ecfsigma factor, C 97.0 0.0011 3.7E-08 55.6 6.5 78 75-171 133-210 (223)
131 1vrb_A Putative asparaginyl hy 97.0 0.0064 2.2E-07 53.9 11.2 72 100-172 145-251 (342)
132 3kmh_A D-lyxose isomerase; cup 96.9 0.0028 9.5E-08 53.5 8.0 79 94-172 105-206 (246)
133 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.9 0.0065 2.2E-07 50.0 10.0 70 103-174 68-143 (197)
134 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 96.9 0.01 3.5E-07 48.3 10.7 71 103-174 56-136 (185)
135 2ixk_A DTDP-4-dehydrorhamnose 96.7 0.018 6.1E-07 46.8 11.1 71 103-174 57-137 (184)
136 3bb6_A Uncharacterized protein 96.7 0.011 3.9E-07 45.3 9.2 70 104-174 23-100 (127)
137 4gjz_A Lysine-specific demethy 96.7 0.0042 1.4E-07 50.6 7.2 65 99-164 127-226 (235)
138 1dzr_A DTDP-4-dehydrorhamnose 96.5 0.027 9.2E-07 45.7 10.8 71 103-174 55-136 (183)
139 1oi6_A PCZA361.16; epimerase, 96.5 0.035 1.2E-06 45.8 11.6 71 103-174 55-136 (205)
140 3ryk_A DTDP-4-dehydrorhamnose 96.4 0.017 5.9E-07 47.7 9.3 71 103-174 78-159 (205)
141 2c0z_A NOVW; isomerase, epimer 96.4 0.034 1.1E-06 46.4 10.8 71 103-174 63-144 (216)
142 1wlt_A 176AA long hypothetical 96.3 0.027 9.3E-07 46.2 10.0 71 103-174 73-154 (196)
143 1upi_A DTDP-4-dehydrorhamnose 96.3 0.05 1.7E-06 45.6 11.5 71 103-174 74-155 (225)
144 3d8c_A Hypoxia-inducible facto 96.3 0.017 5.9E-07 51.2 9.1 74 100-174 187-297 (349)
145 1eyb_A Homogentisate 1,2-dioxy 95.8 0.11 3.7E-06 47.8 12.2 105 58-172 118-227 (471)
146 4hn1_A Putative 3-epimerase in 95.7 0.11 3.8E-06 42.8 11.0 71 103-174 52-133 (201)
147 2qdr_A Uncharacterized protein 95.7 0.068 2.3E-06 45.8 9.8 73 92-174 88-161 (303)
148 2xdv_A MYC-induced nuclear ant 95.7 0.086 2.9E-06 48.3 11.4 63 100-163 143-223 (442)
149 3al5_A HTYW5, JMJC domain-cont 95.6 0.038 1.3E-06 48.6 8.4 71 99-172 170-271 (338)
150 2p17_A Pirin-like protein; GK1 95.5 0.11 3.6E-06 44.7 10.6 93 74-174 19-116 (277)
151 4diq_A Lysine-specific demethy 95.5 0.11 3.9E-06 48.1 11.4 75 99-174 167-263 (489)
152 1e5r_A Proline oxidase; oxidor 95.4 0.022 7.6E-07 49.5 6.0 71 95-169 91-170 (290)
153 1j1l_A Pirin; beta sandwich, c 95.4 0.14 4.8E-06 44.3 10.9 93 75-174 20-118 (290)
154 2qjv_A Uncharacterized IOLB-li 95.0 0.17 5.8E-06 43.4 10.3 83 92-176 150-248 (270)
155 3k2o_A Bifunctional arginine d 94.9 0.095 3.3E-06 46.3 8.7 67 101-167 177-284 (336)
156 2qnk_A 3-hydroxyanthranilate 3 94.8 0.087 3E-06 45.5 7.7 56 102-165 214-270 (286)
157 3m3i_A Putative uncharacterize 94.7 0.79 2.7E-05 38.2 13.1 155 48-214 11-212 (225)
158 2yu1_A JMJC domain-containing 94.5 0.12 4E-06 47.6 8.4 75 103-177 204-304 (451)
159 3loi_A Putative uncharacterize 94.3 1.6 5.5E-05 34.9 14.3 128 74-212 25-168 (172)
160 3rcq_A Aspartyl/asparaginyl be 94.2 0.21 7.2E-06 40.9 8.4 91 84-180 90-186 (197)
161 3kv5_D JMJC domain-containing 93.9 0.11 3.8E-06 48.2 6.9 63 103-165 274-362 (488)
162 3kv4_A PHD finger protein 8; e 93.5 0.18 6.3E-06 46.2 7.7 63 104-166 240-328 (447)
163 1ywk_A 4-deoxy-L-threo-5-hexos 93.4 0.27 9.2E-06 42.6 8.0 82 94-177 179-266 (289)
164 1xru_A 4-deoxy-L-threo-5-hexos 93.4 0.82 2.8E-05 39.4 11.0 82 94-178 179-267 (282)
165 3kv9_A JMJC domain-containing 93.2 0.18 6.2E-06 45.6 7.0 61 104-164 184-270 (397)
166 3k3o_A PHF8, PHD finger protei 93.1 0.18 6.1E-06 45.2 6.7 63 103-165 155-243 (371)
167 2oyz_A UPF0345 protein VPA0057 92.6 0.46 1.6E-05 34.4 7.1 53 115-172 40-92 (94)
168 2rg4_A Uncharacterized protein 91.8 0.36 1.2E-05 39.7 6.5 78 96-174 104-204 (216)
169 3hqx_A UPF0345 protein aciad03 91.4 0.79 2.7E-05 34.1 7.3 67 101-173 43-109 (111)
170 3pua_A GRC5, PHD finger protei 91.4 0.33 1.1E-05 43.8 6.3 63 103-165 182-270 (392)
171 1qwr_A Mannose-6-phosphate iso 90.9 0.33 1.1E-05 42.4 5.7 46 115-160 116-179 (319)
172 1xe7_A YML079WP, hypothetical 90.3 6.5 0.00022 32.1 13.8 131 74-213 43-199 (203)
173 1znp_A Hypothetical protein AT 90.3 5.4 0.00019 31.2 11.8 109 74-187 20-135 (154)
174 3dl3_A Tellurite resistance pr 90.3 1.5 5E-05 33.1 8.0 47 118-164 40-89 (119)
175 1pmi_A PMI, phosphomannose iso 89.7 1.4 4.7E-05 40.2 9.0 77 94-173 356-437 (440)
176 3pur_A Lysine-specific demethy 89.0 0.58 2E-05 43.7 5.9 62 104-165 305-392 (528)
177 1qwr_A Mannose-6-phosphate iso 88.4 1.4 4.8E-05 38.3 7.8 57 94-158 250-306 (319)
178 2wfp_A Mannose-6-phosphate iso 85.9 0.94 3.2E-05 40.7 5.3 57 94-158 323-379 (394)
179 1tq5_A Protein YHHW; bicupin, 85.6 4.7 0.00016 33.6 9.2 68 94-172 159-226 (242)
180 1j1l_A Pirin; beta sandwich, c 85.3 4.6 0.00016 34.7 9.2 77 93-174 167-243 (290)
181 1zx5_A Mannosephosphate isomer 85.2 3.3 0.00011 35.6 8.3 67 94-172 229-296 (300)
182 3eo6_A Protein of unknown func 83.9 1.4 4.8E-05 32.5 4.5 55 101-161 42-96 (106)
183 2ypd_A Probable JMJC domain-co 83.8 1 3.5E-05 40.5 4.4 38 139-176 293-330 (392)
184 3mdp_A Cyclic nucleotide-bindi 83.7 2 6.7E-05 31.0 5.4 52 97-150 29-85 (142)
185 2vec_A YHAK, pirin-like protei 83.6 5 0.00017 33.8 8.5 70 94-170 181-250 (256)
186 2p17_A Pirin-like protein; GK1 83.5 4.4 0.00015 34.5 8.2 71 93-172 165-240 (277)
187 2pqq_A Putative transcriptiona 83.0 3.2 0.00011 30.0 6.3 52 97-149 28-80 (149)
188 3idb_B CAMP-dependent protein 79.6 5.2 0.00018 29.7 6.6 51 97-149 61-112 (161)
189 2oz6_A Virulence factor regula 79.0 5.9 0.0002 30.5 7.0 52 98-150 14-66 (207)
190 4ev0_A Transcription regulator 78.7 5.9 0.0002 30.7 6.9 115 98-215 23-187 (216)
191 3iwz_A CAP-like, catabolite ac 77.9 6.6 0.00023 30.7 7.1 52 98-150 35-87 (230)
192 3d0s_A Transcriptional regulat 77.8 7.3 0.00025 30.5 7.3 114 99-215 31-201 (227)
193 2qjv_A Uncharacterized IOLB-li 77.7 13 0.00044 31.7 9.1 72 95-172 29-108 (270)
194 3e97_A Transcriptional regulat 77.5 7.2 0.00025 30.7 7.2 53 97-150 29-82 (231)
195 3fx3_A Cyclic nucleotide-bindi 77.0 7.1 0.00024 30.8 7.1 51 98-149 35-86 (237)
196 1ft9_A Carbon monoxide oxidati 76.9 12 0.00041 29.2 8.3 113 97-215 23-187 (222)
197 2z69_A DNR protein; beta barre 76.8 3.1 0.0001 30.3 4.5 52 97-149 35-87 (154)
198 1zx5_A Mannosephosphate isomer 76.6 1.6 5.4E-05 37.7 3.1 45 116-160 117-179 (300)
199 3ryp_A Catabolite gene activat 76.4 7.9 0.00027 29.8 7.0 116 98-216 20-192 (210)
200 3g7d_A PHPD; non heme Fe(II) d 75.9 39 0.0013 30.0 11.6 77 79-160 320-397 (443)
201 2fmy_A COOA, carbon monoxide o 75.6 15 0.00052 28.5 8.6 113 97-215 27-191 (220)
202 3b02_A Transcriptional regulat 75.1 7.1 0.00024 30.0 6.4 49 101-150 3-52 (195)
203 3gyd_A CNMP-BD protein, cyclic 75.0 7.8 0.00027 29.8 6.6 52 97-149 62-114 (187)
204 3dv8_A Transcriptional regulat 75.0 9.2 0.00031 29.6 7.1 117 98-215 27-193 (220)
205 2ptm_A Hyperpolarization-activ 74.9 6.7 0.00023 30.3 6.2 49 97-149 94-142 (198)
206 3dn7_A Cyclic nucleotide bindi 74.5 9.1 0.00031 29.1 6.9 114 98-215 31-192 (194)
207 2bgc_A PRFA; bacterial infecti 74.0 7.8 0.00027 30.8 6.6 114 99-215 20-194 (238)
208 3kcc_A Catabolite gene activat 73.6 9.3 0.00032 31.0 7.1 117 97-216 69-242 (260)
209 4ava_A Lysine acetyltransferas 73.3 7.7 0.00026 32.6 6.6 52 97-149 36-87 (333)
210 3la7_A Global nitrogen regulat 73.2 9.7 0.00033 30.4 7.0 117 97-216 43-218 (243)
211 1o5l_A Transcriptional regulat 73.1 7.5 0.00026 30.4 6.2 118 97-217 22-190 (213)
212 3bpz_A Potassium/sodium hyperp 72.3 6.9 0.00023 30.4 5.7 48 97-149 95-142 (202)
213 3e6c_C CPRK, cyclic nucleotide 72.2 9.5 0.00032 30.5 6.7 117 97-216 32-202 (250)
214 1zyb_A Transcription regulator 70.9 9.4 0.00032 30.2 6.3 116 97-215 43-210 (232)
215 2zcw_A TTHA1359, transcription 70.0 9.7 0.00033 29.3 6.1 113 99-215 7-170 (202)
216 2gau_A Transcriptional regulat 69.7 8.8 0.0003 30.2 5.9 116 97-215 33-204 (232)
217 2wfp_A Mannose-6-phosphate iso 68.4 3.3 0.00011 37.1 3.3 21 140-160 241-261 (394)
218 2qcs_B CAMP-dependent protein 66.5 14 0.00046 30.1 6.6 52 97-149 180-233 (291)
219 2d93_A RAP guanine nucleotide 65.8 8.8 0.0003 27.4 4.7 48 97-149 39-87 (134)
220 4f8a_A Potassium voltage-gated 64.7 18 0.00061 26.3 6.4 48 98-150 51-98 (160)
221 3pna_A CAMP-dependent protein 61.7 25 0.00085 25.6 6.7 48 97-149 61-108 (154)
222 3ocp_A PRKG1 protein; serine/t 61.2 19 0.00064 25.7 5.8 48 97-149 46-93 (139)
223 1o7f_A CAMP-dependent RAP1 gua 61.1 16 0.00056 32.1 6.5 54 97-151 65-121 (469)
224 1xsq_A Ureidoglycolate hydrola 59.8 28 0.00096 27.3 6.9 64 109-172 70-139 (168)
225 2xxz_A Lysine-specific demethy 59.3 9.4 0.00032 33.5 4.4 32 139-170 279-310 (332)
226 2bdr_A Ureidoglycolate hydrola 58.6 33 0.0011 27.1 7.2 79 94-172 55-141 (175)
227 1pmi_A PMI, phosphomannose iso 57.9 6.2 0.00021 35.9 3.1 21 141-161 268-288 (440)
228 3tnp_B CAMP-dependent protein 57.7 25 0.00086 31.0 7.1 51 97-149 168-219 (416)
229 1vp6_A CNBD, cyclic-nucleotide 56.9 13 0.00043 26.4 4.2 45 98-149 35-79 (138)
230 3shr_A CGMP-dependent protein 55.1 22 0.00075 29.1 5.9 52 97-149 180-233 (299)
231 3ukn_A Novel protein similar t 52.5 21 0.00071 27.7 5.1 49 97-150 98-146 (212)
232 2qcs_B CAMP-dependent protein 50.6 33 0.0011 27.7 6.3 48 97-149 62-109 (291)
233 1wgp_A Probable cyclic nucleot 49.0 4.4 0.00015 29.0 0.5 49 99-149 31-82 (137)
234 3of1_A CAMP-dependent protein 48.4 21 0.00071 27.9 4.5 47 98-149 31-77 (246)
235 3of1_A CAMP-dependent protein 48.0 37 0.0012 26.4 6.0 49 97-149 148-196 (246)
236 3dkw_A DNR protein; CRP-FNR, H 47.9 9 0.00031 29.8 2.2 116 97-215 32-202 (227)
237 2qdr_A Uncharacterized protein 47.4 39 0.0013 28.8 6.1 65 94-176 216-288 (303)
238 3avr_A Lysine-specific demethy 43.2 33 0.0011 32.0 5.5 32 139-170 338-369 (531)
239 4ask_A Lysine-specific demethy 43.1 23 0.00079 32.8 4.4 29 139-167 313-341 (510)
240 3shr_A CGMP-dependent protein 42.1 35 0.0012 27.8 5.1 48 97-149 62-109 (299)
241 1ywk_A 4-deoxy-L-threo-5-hexos 40.3 1.3E+02 0.0044 25.8 8.4 65 101-170 63-130 (289)
242 1xru_A 4-deoxy-L-threo-5-hexos 39.3 54 0.0019 28.0 5.9 50 116-170 78-130 (282)
243 4din_B CAMP-dependent protein 38.8 48 0.0016 28.6 5.7 49 100-149 274-324 (381)
244 1yll_A PA5104, conserved hypot 37.4 68 0.0023 25.8 6.0 35 116-154 140-174 (200)
245 1o7f_A CAMP-dependent RAP1 gua 36.1 55 0.0019 28.6 5.7 46 100-149 364-409 (469)
246 1s4c_A Protein HI0227; double- 33.4 1.1E+02 0.0038 23.1 6.4 53 108-160 60-133 (155)
247 3tnp_B CAMP-dependent protein 32.8 51 0.0018 28.9 4.9 52 97-149 290-348 (416)
248 4f7z_A RAP guanine nucleotide 29.7 94 0.0032 30.5 6.7 55 94-149 62-119 (999)
249 3dkq_A PKHD-type hydroxylase S 29.7 66 0.0023 26.6 4.8 63 96-161 100-180 (243)
250 1tc3_C Protein (TC3 transposas 28.3 82 0.0028 17.5 4.1 29 190-218 20-48 (51)
251 4din_B CAMP-dependent protein 25.8 72 0.0025 27.5 4.6 48 97-149 153-200 (381)
252 2dkz_A Hypothetical protein LO 25.3 35 0.0012 23.8 1.9 32 183-215 45-76 (84)
253 3g7d_A PHPD; non heme Fe(II) d 23.5 2.6E+02 0.009 24.7 7.5 74 140-213 156-265 (443)
254 3cf6_E RAP guanine nucleotide 23.4 1.1E+02 0.0038 29.0 5.7 47 99-149 58-104 (694)
255 4f7z_A RAP guanine nucleotide 23.3 83 0.0028 30.9 4.9 43 103-149 367-409 (999)
256 1pcq_O Groes protein; chaperon 22.3 2.1E+02 0.0072 20.2 6.3 48 104-154 22-70 (97)
257 2a1x_A Phytanoyl-COA dioxygena 20.8 96 0.0033 25.7 4.3 40 137-176 214-255 (308)
258 2opw_A Phyhd1 protein; double- 20.2 86 0.0029 25.6 3.8 27 138-164 227-254 (291)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=1.5e-48 Score=325.92 Aligned_cols=193 Identities=42% Similarity=0.754 Sum_probs=180.6
Q ss_pred cCCCCCceeeccCCCCCccccccccccccCCCCCCCCCCeEEec-CCCCCCcC-CCCeEEEEecCCCCCCccccceEEEE
Q 048761 22 SDPDPIQDFCIPNPKFGSIKVAHLTILPCKNSSEATTDDFVFSG-LKSAGNFS-DTGLATIPVNPTVFPGINTLGMSFVR 99 (221)
Q Consensus 22 ~d~~~~~dfcva~~~~~~~~~~g~~~~~ck~~~~vt~~df~~~~-l~~~~~~~-~~g~~v~~~~~~~~P~l~~~g~s~~r 99 (221)
+||||||||||||++++.+++|| |||| |+.++++||+|++ +.+++++. +.|+.++.++...+|++++.++++.+
T Consensus 1 ~~~~~~~d~c~~~~~~~~~~~~g---~~c~-~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~ 76 (201)
T 1fi2_A 1 TDPDPLQDFCVADLDGKAVSVNG---HTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNR 76 (201)
T ss_dssp CCCCCSSSCCCBCCCTTSCCCSS---CCBC-CGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEE
T ss_pred CCCcccceeEEecCCCCcccccC---cccc-cCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEE
Confidence 69999999999999763278999 9999 9999999999999 99998877 88999999999999999999999999
Q ss_pred EEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC---CceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcCC
Q 048761 100 ADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS---SRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNSQ 176 (221)
Q Consensus 100 v~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~---~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~ 176 (221)
++++||+..++|||++++|++||++|++++++.+++ ++.+.+.|++||+++||+|.+|+++|.++++++++++++++
T Consensus 77 ~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~ 156 (201)
T 1fi2_A 77 VDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQ 156 (201)
T ss_dssp EEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSS
T ss_pred EEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCC
Confidence 999999999999999889999999999999998654 67667999999999999999999999999999999999999
Q ss_pred CCCceecccchhcC--CCCHHHHHHHhCCCHHHHHHhhhcCCCC
Q 048761 177 NPGNQKIPSAIFGS--GIDVELLEKAFGLSPKQIGTMRRRFDPK 218 (221)
Q Consensus 177 ~pg~~~~~~~lf~~--~~p~evla~af~~~~~~v~~l~~~~~~~ 218 (221)
+|+.+.++.++|++ .+++|+|+++|+++.+++++||++|.++
T Consensus 157 ~p~~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~~~~ 200 (201)
T 1fi2_A 157 NPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGG 200 (201)
T ss_dssp CCCCEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHSTTC
T ss_pred CCCeEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhhcCC
Confidence 99999999999995 3999999999999999999999999764
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.97 E-value=1e-30 Score=242.11 Aligned_cols=140 Identities=18% Similarity=0.320 Sum_probs=132.8
Q ss_pred CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-ceEEEEecCCcEEEEc
Q 048761 74 DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS-RVFARVIKQGEVMVFP 152 (221)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~-k~~~~~L~~GDv~~~P 152 (221)
+.|++++.+++.+||+|+++++++++++|.||++.+|||||+|+|++||++|+++++++++++ +++.+.|++||+++||
T Consensus 302 ~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P 381 (466)
T 3kgl_A 302 PQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIP 381 (466)
T ss_dssp TTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEEC
T ss_pred CCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEEC
Confidence 789999999999999999999999999999999999999999999999999999999999864 6788999999999999
Q ss_pred CCCeEEEEecCCCCEEEEEEEcCCCCCceecc--cchhcCCCCHHHHHHHhCCCHHHHHHhhhcC
Q 048761 153 RGLMHFQMNVGDEPATIFGSFNSQNPGNQKIP--SAIFGSGIDVELLEKAFGLSPKQIGTMRRRF 215 (221)
Q Consensus 153 ~G~~H~~~N~g~~~a~~l~v~ss~~pg~~~~~--~~lf~~~~p~evla~af~~~~~~v~~l~~~~ 215 (221)
+|++|++ |.+++++.+++++++++|+.+.++ .++|+ .+|++||+++|+++.+++++|+++.
T Consensus 382 ~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~-~lP~eVla~aF~v~~~~v~~Lk~~q 444 (466)
T 3kgl_A 382 QGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLR-GLPLEVISNGYQISLEEARRVKFNT 444 (466)
T ss_dssp TTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGG-GSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhh-hCCHHHHHHHhCcCHHHHHHHHhcc
Confidence 9999998 778999999999999999999887 68888 8999999999999999999999853
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.97 E-value=6e-30 Score=238.51 Aligned_cols=139 Identities=15% Similarity=0.291 Sum_probs=131.1
Q ss_pred CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC-CceEEEEecCCcEEEEc
Q 048761 74 DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS-SRVFARVIKQGEVMVFP 152 (221)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~-~k~~~~~L~~GDv~~~P 152 (221)
+.|++++.+++.+||+|+++|+++++++|.||++.+|||||+|+|++||++|++++++++++ ++++.++|++||+++||
T Consensus 337 ~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P 416 (496)
T 3ksc_A 337 PEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVP 416 (496)
T ss_dssp TTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEEC
T ss_pred CCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEEC
Confidence 77999999999999999999999999999999999999999999999999999999999986 46778899999999999
Q ss_pred CCCeEEEEecCCCCEEEEEEEcCCCCCceecc--cchhcCCCCHHHHHHHhCCCHHHHHHhhhc
Q 048761 153 RGLMHFQMNVGDEPATIFGSFNSQNPGNQKIP--SAIFGSGIDVELLEKAFGLSPKQIGTMRRR 214 (221)
Q Consensus 153 ~G~~H~~~N~g~~~a~~l~v~ss~~pg~~~~~--~~lf~~~~p~evla~af~~~~~~v~~l~~~ 214 (221)
+|++|++.|. ++++.+++++++++|+.+.++ .++|+ .+|++||+++|+++.+++++|++.
T Consensus 417 ~G~~H~~~a~-~e~~~~l~f~~s~np~~~~LaG~~sv~~-~~p~eVLa~aF~v~~~~v~~Lk~~ 478 (496)
T 3ksc_A 417 QNYAVAAKSL-SDRFSYVAFKTNDRAGIARLAGTSSVIN-NLPLDVVAATFNLQRNEARQLKSN 478 (496)
T ss_dssp TTCEEEEEEC-SSEEEEEEEESSTTCCEEESSSTTCTTT-TSCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCCEEEEEeC-CCCEEEEEEECCCCCccccccchhhhhh-hCCHHHHHHHHCcCHHHHHHHHhc
Confidence 9999998775 788999999999999999887 67887 899999999999999999999985
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.97 E-value=4.5e-30 Score=237.75 Aligned_cols=140 Identities=17% Similarity=0.258 Sum_probs=132.4
Q ss_pred CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC-CceEEEEecCCcEEEEc
Q 048761 74 DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS-SRVFARVIKQGEVMVFP 152 (221)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~-~k~~~~~L~~GDv~~~P 152 (221)
+.|+.++.+++.+||+|+++|++++++++.||++.+|||||+|+|++||++|++++++++++ ++++.+.|++||+++||
T Consensus 302 ~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP 381 (465)
T 3qac_A 302 PEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVP 381 (465)
T ss_dssp TTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEEC
T ss_pred CCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEEC
Confidence 78999999999999999999999999999999999999999999999999999999999986 46788999999999999
Q ss_pred CCCeEEEEecCCCCEEEEEEEcCCCCCceecc--cchhcCCCCHHHHHHHhCCCHHHHHHhhhcC
Q 048761 153 RGLMHFQMNVGDEPATIFGSFNSQNPGNQKIP--SAIFGSGIDVELLEKAFGLSPKQIGTMRRRF 215 (221)
Q Consensus 153 ~G~~H~~~N~g~~~a~~l~v~ss~~pg~~~~~--~~lf~~~~p~evla~af~~~~~~v~~l~~~~ 215 (221)
+|++|++. .|++++.+++++++++|+.+.++ +++|+ .+|++||+++|++|.+++++||++.
T Consensus 382 ~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~-~ip~eVla~aF~v~~e~v~~Lk~~~ 444 (465)
T 3qac_A 382 QNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIR-SLPIDVVSNIYQISREEAFGLKFNR 444 (465)
T ss_dssp TTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHH-HSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhh-hCCHHHHHHHhCCCHHHHHHHHhcc
Confidence 99999986 57889999999999999999987 78888 8999999999999999999999864
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.96 E-value=1.5e-29 Score=234.52 Aligned_cols=145 Identities=15% Similarity=0.257 Sum_probs=134.5
Q ss_pred CCCcC-CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC-CceEEEEecCC
Q 048761 69 AGNFS-DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS-SRVFARVIKQG 146 (221)
Q Consensus 69 ~~~~~-~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~-~k~~~~~L~~G 146 (221)
.+++. +.|++++.+++.+||+|++++++++++++.||++.+||||++++|++||++|++++++++++ ++.+..+|++|
T Consensus 295 ~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~G 374 (459)
T 2e9q_A 295 RADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREG 374 (459)
T ss_dssp CCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETT
T ss_pred cCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCC
Confidence 34443 88999999999999999999999999999999999999999999999999999999999876 46667789999
Q ss_pred cEEEEcCCCeEEEEecCCCCEEEEEEEcCCCCCceecc--cchhcCCCCHHHHHHHhCCCHHHHHHhhhcC
Q 048761 147 EVMVFPRGLMHFQMNVGDEPATIFGSFNSQNPGNQKIP--SAIFGSGIDVELLEKAFGLSPKQIGTMRRRF 215 (221)
Q Consensus 147 Dv~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~~~~~--~~lf~~~~p~evla~af~~~~~~v~~l~~~~ 215 (221)
|+++||+|.+|++.| +++++.+++++++++|+.+.++ .++|+ .+|++||+++|+++.+++++|++..
T Consensus 375 Dv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~-~~p~~Vla~af~v~~~~v~~l~~~~ 443 (459)
T 2e9q_A 375 QVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMR-MLPLGVLSNMYRISREEAQRLKYGQ 443 (459)
T ss_dssp CEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHH-HSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred cEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHH-hCCHHHHHHHHCcCHHHHHHHHhcC
Confidence 999999999999999 7889999999999999999997 78888 7999999999999999999999863
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.96 E-value=5.9e-29 Score=232.23 Aligned_cols=144 Identities=17% Similarity=0.295 Sum_probs=130.2
Q ss_pred CCcC-CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-ceEEEEecCCc
Q 048761 70 GNFS-DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS-RVFARVIKQGE 147 (221)
Q Consensus 70 ~~~~-~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~-k~~~~~L~~GD 147 (221)
.++. +.|++++.+++.+||+|+++++++++++|.||++++|||||+++|++||++|++++++++++| +++.++|++||
T Consensus 368 ~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GD 447 (531)
T 3fz3_A 368 ADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQ 447 (531)
T ss_dssp CSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTC
T ss_pred CCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCe
Confidence 3444 889999999999999999999999999999999999999999999999999999999998864 56889999999
Q ss_pred EEEEcCCCeEEEEecCCCCEEEEEEEcCCCCCceecc--cchhcCCCCHHHHHHHhCCCHHHHHHhhhcC
Q 048761 148 VMVFPRGLMHFQMNVGDEPATIFGSFNSQNPGNQKIP--SAIFGSGIDVELLEKAFGLSPKQIGTMRRRF 215 (221)
Q Consensus 148 v~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~~~~~--~~lf~~~~p~evla~af~~~~~~v~~l~~~~ 215 (221)
+++||+|++|+.. .+++.+.++++.++++|++..++ .++|+ .+|++||+++|+++.+++++|++..
T Consensus 448 V~v~P~G~~H~~~-ag~e~l~flaF~ss~np~~~~LaG~~svf~-~lP~eVLa~aF~v~~e~v~kLk~~~ 515 (531)
T 3fz3_A 448 LFIVPQNHGVIQQ-AGNQGFEYFAFKTEENAFINTLAGRTSFLR-ALPDEVLANAYQISREQARQLKYNR 515 (531)
T ss_dssp EEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSTTCHHH-HSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred EEEECCCCeEEEe-cCCCCEEEEEEecCCCCcceeccchhHHHH-hCCHHHHHHHhCcCHHHHHHHHhcC
Confidence 9999999999876 45677777755566999999887 78898 6999999999999999999999864
No 7
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.96 E-value=1.5e-28 Score=227.36 Aligned_cols=156 Identities=16% Similarity=0.223 Sum_probs=136.1
Q ss_pred CCCeEEecCCCCCCcCCCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-
Q 048761 58 TDDFVFSGLKSAGNFSDTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS- 136 (221)
Q Consensus 58 ~~df~~~~l~~~~~~~~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~- 136 (221)
...+.|+.+.+++..++.++.++.+++.++|+|+++|++++++++.||++.+|||||+++|++||++|+++++++++++
T Consensus 244 ~~~~~~~l~~~~p~~~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~ 323 (445)
T 2cav_A 244 SQDKPFNLRSRDPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQ 323 (445)
T ss_dssp --CCCEETTSSCCSEESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC---
T ss_pred CcccceeccccCCCccCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCc
Confidence 4466788766655444788999999999999999999999999999999999999999999999999999999998863
Q ss_pred --------c--eEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEE-cCCCCCceecc---cchhcCCCCHHHHHHHhC
Q 048761 137 --------R--VFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSF-NSQNPGNQKIP---SAIFGSGIDVELLEKAFG 202 (221)
Q Consensus 137 --------k--~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~-ss~~pg~~~~~---~~lf~~~~p~evla~af~ 202 (221)
+ +++.+|++||+++||+|.+|++.|. +++.++++. ++++|+.+.++ .++|+ .+|++||+++|+
T Consensus 324 ~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~-~~p~~vla~af~ 400 (445)
T 2cav_A 324 QQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIR-QIPRQVSDLTFP 400 (445)
T ss_dssp --------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGG-GSCHHHHHHHSS
T ss_pred ccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhh-hCCHHHHHHHHC
Confidence 3 5889999999999999999999998 467777765 45689999887 78998 799999999999
Q ss_pred CCHHHHHHhhhcCC
Q 048761 203 LSPKQIGTMRRRFD 216 (221)
Q Consensus 203 ~~~~~v~~l~~~~~ 216 (221)
+|.+++++|++...
T Consensus 401 v~~~~v~~l~~~~~ 414 (445)
T 2cav_A 401 GSGEEVEELLENQK 414 (445)
T ss_dssp SCHHHHHHHHHHCC
T ss_pred cCHHHHHHHHhcCC
Confidence 99999999988653
No 8
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.96 E-value=2.5e-28 Score=224.15 Aligned_cols=156 Identities=16% Similarity=0.229 Sum_probs=138.5
Q ss_pred CCCeEEecCCCCCCcCCCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-
Q 048761 58 TDDFVFSGLKSAGNFSDTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS- 136 (221)
Q Consensus 58 ~~df~~~~l~~~~~~~~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~- 136 (221)
...+.|+.+.+++..++.+++++.+++.++|+|++++++++++++.||++.+||||++++|++||++|+++++++++++
T Consensus 212 ~~~~~~~l~~~~p~~~~~~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~ 291 (416)
T 1uij_A 212 SEDEPFNLRSRNPIYSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQ 291 (416)
T ss_dssp CSSSCEETTSSCCSEECSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC--
T ss_pred CcccceeccccCCCccCCCceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCc
Confidence 4567788765554444777799999999999999999999999999999999999999999999999999999998865
Q ss_pred -------------ceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcC-CCCCceecc---cchhcCCCCHHHHHH
Q 048761 137 -------------RVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNS-QNPGNQKIP---SAIFGSGIDVELLEK 199 (221)
Q Consensus 137 -------------k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss-~~pg~~~~~---~~lf~~~~p~evla~ 199 (221)
+.+...|++||+++||+|.+|++.|. +++.+++++++ ++|+.+.++ .++|+ .+|++||++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~-~~p~~vla~ 368 (416)
T 1uij_A 292 QQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVR-QIERQVQEL 368 (416)
T ss_dssp ----------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGG-GSCHHHHHH
T ss_pred cccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHH-hCCHHHHHH
Confidence 46677999999999999999999998 57999988865 599999887 78998 899999999
Q ss_pred HhCCCHHHHHHhhhcCC
Q 048761 200 AFGLSPKQIGTMRRRFD 216 (221)
Q Consensus 200 af~~~~~~v~~l~~~~~ 216 (221)
+|+++.+++++|++...
T Consensus 369 af~~~~~~v~~l~~~~~ 385 (416)
T 1uij_A 369 AFPGSAQDVERLLKKQR 385 (416)
T ss_dssp HSSSCHHHHHHHTTSCC
T ss_pred HHCcCHHHHHHHHhcCC
Confidence 99999999999998653
No 9
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.95 E-value=4.7e-28 Score=226.53 Aligned_cols=145 Identities=18% Similarity=0.303 Sum_probs=134.1
Q ss_pred CCCcC-CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-ceEEEEecCC
Q 048761 69 AGNFS-DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS-RVFARVIKQG 146 (221)
Q Consensus 69 ~~~~~-~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~-k~~~~~L~~G 146 (221)
.+++. +.|+.++.++..++|+|+++++++++++++||++.+||||++++|++||++|++++++++++| +.+...|++|
T Consensus 345 ~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~G 424 (510)
T 3c3v_A 345 SPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEG 424 (510)
T ss_dssp CCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETT
T ss_pred cCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCC
Confidence 34444 889999999999999999999999999999999999999999999999999999999998764 6667789999
Q ss_pred cEEEEcCCCeEEEEecCCCCEEEEEEEcCCCCCceecc--cchhcCCCCHHHHHHHhCCCHHHHHHhhhcC
Q 048761 147 EVMVFPRGLMHFQMNVGDEPATIFGSFNSQNPGNQKIP--SAIFGSGIDVELLEKAFGLSPKQIGTMRRRF 215 (221)
Q Consensus 147 Dv~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~~~~~--~~lf~~~~p~evla~af~~~~~~v~~l~~~~ 215 (221)
|+++||+|++|++.| +++.+.+++++++++|+.+.++ .++|+ .+|++||+++|+++.+++++|++.+
T Consensus 425 Dv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~-~lp~eVla~aF~v~~e~v~~L~~~~ 493 (510)
T 3c3v_A 425 HVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVID-NLPEEVVANSYGLPREQARQLKNNN 493 (510)
T ss_dssp CEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTT-TSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred cEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHH-hCCHHHHHHHHCcCHHHHHHHHhhC
Confidence 999999999999999 8888999998888899999997 88998 7999999999999999999999875
No 10
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.95 E-value=7.8e-28 Score=224.02 Aligned_cols=144 Identities=17% Similarity=0.324 Sum_probs=133.4
Q ss_pred CCcC-CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-ceEEEEecCCc
Q 048761 70 GNFS-DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS-RVFARVIKQGE 147 (221)
Q Consensus 70 ~~~~-~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~-k~~~~~L~~GD 147 (221)
+++. +.|+.++.++..++|+|+++++++++++++||++.+||||++++|++||++|++++++++++| +.+...|++||
T Consensus 312 ~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GD 391 (476)
T 1fxz_A 312 PDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGR 391 (476)
T ss_dssp CSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTC
T ss_pred CCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCC
Confidence 3443 889999999999999999999999999999999999999999999999999999999998764 56677899999
Q ss_pred EEEEcCCCeEEEEecCCCCEEEEEEEcCCCCCceecc--cchhcCCCCHHHHHHHhCCCHHHHHHhhhcC
Q 048761 148 VMVFPRGLMHFQMNVGDEPATIFGSFNSQNPGNQKIP--SAIFGSGIDVELLEKAFGLSPKQIGTMRRRF 215 (221)
Q Consensus 148 v~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~~~~~--~~lf~~~~p~evla~af~~~~~~v~~l~~~~ 215 (221)
+++||+|.+|++.| +++.+.+++++++++|+.+.++ .++|+ .+|++||+++|+++.+++++|++.+
T Consensus 392 v~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~-~~p~~Vla~af~~~~~~v~~l~~~~ 459 (476)
T 1fxz_A 392 VLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLN-ALPEEVIQHTFNLKSQQARQIKNNN 459 (476)
T ss_dssp EEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGG-GSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred EEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHH-hCCHHHHHHHhCcCHHHHHHHHhhC
Confidence 99999999999999 8889999999988999999887 78998 7999999999999999999999875
No 11
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.95 E-value=5.9e-28 Score=222.72 Aligned_cols=157 Identities=18% Similarity=0.246 Sum_probs=138.5
Q ss_pred CCCCCeEEecCCCCCCcCCCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC
Q 048761 56 ATTDDFVFSGLKSAGNFSDTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS 135 (221)
Q Consensus 56 vt~~df~~~~l~~~~~~~~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~ 135 (221)
.....+.|+.+.+++..++.|+.++.+++.++|+|++++++++++++.||++.+||||++++|++||++|++++++++++
T Consensus 227 ~~~~~~~~~l~~~~p~~~~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~ 306 (434)
T 2ea7_A 227 LSSQDEPFNLRNSKPIYSNKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLS 306 (434)
T ss_dssp TTCSSSCEETTSSCCSEEETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEE
T ss_pred CCCcccceeeccCCCceeCCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecC
Confidence 34556778876565544478889999999999999999999999999999999999999999999999999999999875
Q ss_pred C-------------ceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEc-CCCCCceecc---cchhcCCCCHHHHH
Q 048761 136 S-------------RVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFN-SQNPGNQKIP---SAIFGSGIDVELLE 198 (221)
Q Consensus 136 ~-------------k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~s-s~~pg~~~~~---~~lf~~~~p~evla 198 (221)
+ +.+...|++||+++||+|.+|++.|. +++.+++++. +++|+.+.++ .++|+ .+|++||+
T Consensus 307 g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~-~~p~~vla 383 (434)
T 2ea7_A 307 DQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMS-EIPTEVLE 383 (434)
T ss_dssp ECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGG-GSCHHHHH
T ss_pred ccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhh-hCCHHHHH
Confidence 3 26677999999999999999999998 4688888775 4589999888 78998 89999999
Q ss_pred HHhCCCHHHHHHhhhcC
Q 048761 199 KAFGLSPKQIGTMRRRF 215 (221)
Q Consensus 199 ~af~~~~~~v~~l~~~~ 215 (221)
++|+++.+++++|++..
T Consensus 384 ~af~v~~~~v~~l~~~~ 400 (434)
T 2ea7_A 384 VSFPASGKKVEKLIKKQ 400 (434)
T ss_dssp HHSSSCHHHHHHHHTTC
T ss_pred HHHCcCHHHHHHHHhcC
Confidence 99999999999999864
No 12
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.95 E-value=5.8e-28 Score=225.68 Aligned_cols=146 Identities=20% Similarity=0.354 Sum_probs=134.4
Q ss_pred CCCCcC-CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC-CceEEEEecC
Q 048761 68 SAGNFS-DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS-SRVFARVIKQ 145 (221)
Q Consensus 68 ~~~~~~-~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~-~k~~~~~L~~ 145 (221)
.++++. +.|+.++.+++.++|+|+++++++++++++||++.+||||++++|++||++|++++++++++ ++.+...|++
T Consensus 339 ~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~ 418 (493)
T 2d5f_A 339 SRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRR 418 (493)
T ss_dssp GGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred CCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcC
Confidence 455655 89999999999999999999999999999999999999999999999999999999999876 4556678999
Q ss_pred CcEEEEcCCCeEEEEecCCCCEEEEEEEcCCCCCceecccchhcCCCCHHHHHHHhCCCHHHHHHhhhcCC
Q 048761 146 GEVMVFPRGLMHFQMNVGDEPATIFGSFNSQNPGNQKIPSAIFGSGIDVELLEKAFGLSPKQIGTMRRRFD 216 (221)
Q Consensus 146 GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~~~~~~~lf~~~~p~evla~af~~~~~~v~~l~~~~~ 216 (221)
||+++||+|.+|++.| +++++.+++++++++|+.+.+ .++|+ .+|++||+++|+++.+++++|++...
T Consensus 419 GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~-~~p~eVla~aF~v~~~~v~~l~~~~~ 486 (493)
T 2d5f_A 419 GQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFR-AIPSEVLSNSYNLGQSQVRQLKYQGN 486 (493)
T ss_dssp TCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHH-HSCHHHHHHHHTCCHHHHHHHHHSSC
T ss_pred CCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHH-hCCHHHHHHHHCcCHHHHHHHHhcCC
Confidence 9999999999999998 458899999999999999999 78998 69999999999999999999998763
No 13
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.95 E-value=2.6e-27 Score=217.32 Aligned_cols=155 Identities=19% Similarity=0.239 Sum_probs=135.3
Q ss_pred CCeEEecCCCCCCcCCCCeEEEEecCCCC-CCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-
Q 048761 59 DDFVFSGLKSAGNFSDTGLATIPVNPTVF-PGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS- 136 (221)
Q Consensus 59 ~df~~~~l~~~~~~~~~g~~v~~~~~~~~-P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~- 136 (221)
..+.|+.+.+++..++.+++++.+++.++ |+|+++|++++|+++.||++.+|||||+++|++||++|+++++++++++
T Consensus 226 ~~~~~nl~~~~p~~~n~~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~ 305 (418)
T 3s7i_A 226 ITNPINLREGEPDLSNNFGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKE 305 (418)
T ss_dssp CCCCEETTCSCCSEEETTEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC
T ss_pred CCcccccccCCCceeCCCCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCc
Confidence 36778877666654566778899999999 9999999999999999999999999999999999999999999998654
Q ss_pred ------------------------ceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEE-cCCCCCceeccc---chh
Q 048761 137 ------------------------RVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSF-NSQNPGNQKIPS---AIF 188 (221)
Q Consensus 137 ------------------------k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~-ss~~pg~~~~~~---~lf 188 (221)
+.+...|++||+++||+|++||+.|.+ ++++++.. ++++|+.+.++. ++|
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv~ 383 (418)
T 3s7i_A 306 QQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNVI 383 (418)
T ss_dssp -------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBHH
T ss_pred cccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhhh
Confidence 467899999999999999999999865 47776644 456999998874 788
Q ss_pred cCCCCHHHHHHHhCCCHHHHHHhhhcCC
Q 048761 189 GSGIDVELLEKAFGLSPKQIGTMRRRFD 216 (221)
Q Consensus 189 ~~~~p~evla~af~~~~~~v~~l~~~~~ 216 (221)
+ +||++||++||++|.+++++|++...
T Consensus 384 ~-~~~~evla~af~v~~~~v~~L~~~q~ 410 (418)
T 3s7i_A 384 D-QIEKQAKDLAFPGSGEQVEKLIKNQK 410 (418)
T ss_dssp H-HSCHHHHHHHSSSCHHHHHHHHHTCC
T ss_pred h-cCCHHHHHHHhCCCHHHHHHHHhcCC
Confidence 8 89999999999999999999998654
No 14
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.94 E-value=1.5e-26 Score=189.55 Aligned_cols=149 Identities=13% Similarity=0.205 Sum_probs=122.8
Q ss_pred eEEecCCCCCCcCCCCeEEEEecC-----CCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC
Q 048761 61 FVFSGLKSAGNFSDTGLATIPVNP-----TVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS 135 (221)
Q Consensus 61 f~~~~l~~~~~~~~~g~~v~~~~~-----~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~ 135 (221)
|+|............|+.++.++. ..+|+++ ++++.+++++||+..+|| |++++|++||++|++++++++++
T Consensus 4 ~~f~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~~~ 80 (178)
T 1dgw_A 4 YLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNPD 80 (178)
T ss_dssp TEECGGGEEEEEEETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEETT
T ss_pred ceechhhcccceEcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEeCC
Confidence 566643332222267899999876 5678776 589999999999999999 88899999999999999999765
Q ss_pred CceEEEEecCCcEEEEcCCCeEEEEecCCC-CEEEEEEE-cCCCCCceec--------ccchhcCCCCHHHHHHHhCCCH
Q 048761 136 SRVFARVIKQGEVMVFPRGLMHFQMNVGDE-PATIFGSF-NSQNPGNQKI--------PSAIFGSGIDVELLEKAFGLSP 205 (221)
Q Consensus 136 ~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~-~a~~l~v~-ss~~pg~~~~--------~~~lf~~~~p~evla~af~~~~ 205 (221)
+. ..+.|++||+++||+|.+|+++|.|++ ++++++++ ++++||.+.. +.++|+ ++|+|||+++|+++.
T Consensus 81 ~~-~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~-~~p~~vla~af~v~~ 158 (178)
T 1dgw_A 81 GR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS-AFSKNFLEASYDSPY 158 (178)
T ss_dssp EE-EEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG-GSCHHHHHHHHTSCH
T ss_pred Cc-EEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhh-hCCHHHHHHHHCcCH
Confidence 43 368999999999999999999999986 78888875 4668885433 257887 899999999999999
Q ss_pred HHHHHhhhc
Q 048761 206 KQIGTMRRR 214 (221)
Q Consensus 206 ~~v~~l~~~ 214 (221)
+++++|+..
T Consensus 159 ~~~~~l~~~ 167 (178)
T 1dgw_A 159 DEIEQTLLQ 167 (178)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHhcC
Confidence 999999944
No 15
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.92 E-value=6.5e-25 Score=203.51 Aligned_cols=140 Identities=21% Similarity=0.346 Sum_probs=119.9
Q ss_pred CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCc-eE-------------
Q 048761 74 DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSR-VF------------- 139 (221)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k-~~------------- 139 (221)
..++. ++++....|+|+++|++++|++++||++.+||||+ ++|++||++|++.++++.++++ .|
T Consensus 43 se~G~-~~~~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~ 120 (459)
T 2e9q_A 43 AEAGF-TEVWDQDNDEFQCAGVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSA 120 (459)
T ss_dssp ETTEE-EEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEEECCC-------C
T ss_pred cCCcE-EEecCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEEEEeCCCcchhccchhhccccccc
Confidence 44555 45577888999999999999999999999999997 8999999999999999977532 22
Q ss_pred -------EEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcCCC---C-----Cceec---------------------
Q 048761 140 -------ARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNSQN---P-----GNQKI--------------------- 183 (221)
Q Consensus 140 -------~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~~---p-----g~~~~--------------------- 183 (221)
.+.|++||+++||+|++||++|.|++++++++++++.| + ..+.+
T Consensus 121 ~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~ 200 (459)
T 2e9q_A 121 FKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRKG 200 (459)
T ss_dssp CCEEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC--------
T ss_pred cccccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhccccccccc
Confidence 47999999999999999999999999999999999665 2 12222
Q ss_pred -----ccchhcCCCCHHHHHHHhCCCHHHHHHhhhcCC
Q 048761 184 -----PSAIFGSGIDVELLEKAFGLSPKQIGTMRRRFD 216 (221)
Q Consensus 184 -----~~~lf~~~~p~evla~af~~~~~~v~~l~~~~~ 216 (221)
+.++|+ ++++++|++||++|.++++||++...
T Consensus 201 ~~~~~~~nif~-gf~~evLa~aF~v~~~~v~kL~~~~~ 237 (459)
T 2e9q_A 201 SSGEKSGNIFS-GFADEFLEEAFQIDGGLVRKLKGEDD 237 (459)
T ss_dssp ----CCCCTTT-TSCHHHHHHHHTCCHHHHHHHHTTTC
T ss_pred cccccccchhh-cCCHHHHHhhcCCCHHHHHhhhhccc
Confidence 248998 89999999999999999999998765
No 16
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.92 E-value=5.5e-25 Score=200.70 Aligned_cols=133 Identities=14% Similarity=0.169 Sum_probs=120.6
Q ss_pred CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeC------C-CceEEEEecCC
Q 048761 74 DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDS------S-SRVFARVIKQG 146 (221)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~------~-~k~~~~~L~~G 146 (221)
+.+++++.+++.+ ++++++++++.||++.+||||++++|++||++|+++++++++ + ++.+...|++|
T Consensus 224 n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~G 297 (397)
T 2phl_A 224 NEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKD 297 (397)
T ss_dssp ETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETT
T ss_pred CCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCC
Confidence 6778899999877 789999999999999999999999999999999999999987 4 47889999999
Q ss_pred cEEEEcCCCeEEEEecCCCCEEEEEEEc-CCCCCceecc---cchhcCCCC-----HHHHHHHhCCCHHHHHHhhhcC
Q 048761 147 EVMVFPRGLMHFQMNVGDEPATIFGSFN-SQNPGNQKIP---SAIFGSGID-----VELLEKAFGLSPKQIGTMRRRF 215 (221)
Q Consensus 147 Dv~~~P~G~~H~~~N~g~~~a~~l~v~s-s~~pg~~~~~---~~lf~~~~p-----~evla~af~~~~~~v~~l~~~~ 215 (221)
|+++||+|.+|++.|.+ ++.+++++. +++|+.+.++ .++|+ .+| ++||+++|+++.+++++|++..
T Consensus 298 DV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~-~~p~~~~~~eVla~af~v~~~~v~~l~~~~ 372 (397)
T 2phl_A 298 DVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVIS-SIGRALDGKDVLGLTFSGSGDEVMKLINKQ 372 (397)
T ss_dssp CEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHH-HHHTSTTHHHHHHHHSSSCHHHHHHHHTTC
T ss_pred CEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHh-hCCCccchHHHHHHHhCcCHHHHHHHHhcC
Confidence 99999999999999986 788887665 4599999887 88998 677 9999999999999999999875
No 17
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.92 E-value=9.1e-24 Score=188.81 Aligned_cols=160 Identities=21% Similarity=0.265 Sum_probs=140.4
Q ss_pred CCCCCCCCeEEecCCCCCCcCCCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEE
Q 048761 53 SSEATTDDFVFSGLKSAGNFSDTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFV 132 (221)
Q Consensus 53 ~~~vt~~df~~~~l~~~~~~~~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~ 132 (221)
+...+.++|+|+.+..++...+.|+.++.+....+|+++ ++++.+++++||+..++|||+++.|++||++|++++.+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~ 271 (361)
T 2vqa_A 194 QTAKIEVPHTHNLLGQQPLVSLGGNELRLASAKEFPGSF--NMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVF 271 (361)
T ss_dssp CCCBCCSCCEEECTTSCCSEEETTEEEEEECTTTCTTST--TCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEE
T ss_pred cCCCCCcceEeccccCCCcccCCCceEEEEehhhCcCcc--cceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEE
Confidence 345678899999877665322788999999999999887 478889999999999999999779999999999999997
Q ss_pred eCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcCCCCCceecccchhcCCCCHHHHHHHhCCCHHHHHHhh
Q 048761 133 DSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNSQNPGNQKIPSAIFGSGIDVELLEKAFGLSPKQIGTMR 212 (221)
Q Consensus 133 ~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~~~~~~~lf~~~~p~evla~af~~~~~~v~~l~ 212 (221)
+++|+...+.|++||++++|+|.+|++.|.++++++++++++..+++...++. .++ .+|++||+++|+++.+++++||
T Consensus 272 ~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~-~~~-~~~~~vl~~~f~~~~~~~~~l~ 349 (361)
T 2vqa_A 272 ASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLST-WLA-SNPSSVLGNTFQISPELTKKLP 349 (361)
T ss_dssp CSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHH-HHH-TSCHHHHHHHHTCCHHHHTTSC
T ss_pred cCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHH-Hhh-hCCHHHHHHHHCcCHHHHHhhh
Confidence 76676556999999999999999999999999999999999999999888886 445 7999999999999999999998
Q ss_pred hcCC
Q 048761 213 RRFD 216 (221)
Q Consensus 213 ~~~~ 216 (221)
+...
T Consensus 350 ~~~~ 353 (361)
T 2vqa_A 350 VQDT 353 (361)
T ss_dssp CSCC
T ss_pred ccCC
Confidence 7764
No 18
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.91 E-value=3e-24 Score=199.85 Aligned_cols=140 Identities=17% Similarity=0.307 Sum_probs=119.1
Q ss_pred CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCc-e--------------
Q 048761 74 DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSR-V-------------- 138 (221)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k-~-------------- 138 (221)
..++.+ +++....|+|+++|++++|++++||++.+||||+ ++|++||++|++.+++++++++ .
T Consensus 28 se~G~~-e~~~~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~ 105 (476)
T 1fxz_A 28 SEGGLI-ETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSS 105 (476)
T ss_dssp ETTEEE-EECCTTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTTCCCC--------------
T ss_pred cCCceE-EeeCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCCCcchhhcccccccccccc
Confidence 455554 5577788999999999999999999999999998 8999999999999999986543 1
Q ss_pred -------EEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcCCCCCc--------eec--------------------
Q 048761 139 -------FARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNSQNPGN--------QKI-------------------- 183 (221)
Q Consensus 139 -------~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~--------~~~-------------------- 183 (221)
..+.|++||+++||+|++||++|.|+++++++++++..|+.. +.+
T Consensus 106 ~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ 185 (476)
T 1fxz_A 106 RPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQS 185 (476)
T ss_dssp ----CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC-------
T ss_pred ccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCccccccccccccccccc
Confidence 258999999999999999999999999999999999655422 222
Q ss_pred ------------ccchhcCCCCHHHHHHHhCCCHHHHHHhhhcCC
Q 048761 184 ------------PSAIFGSGIDVELLEKAFGLSPKQIGTMRRRFD 216 (221)
Q Consensus 184 ------------~~~lf~~~~p~evla~af~~~~~~v~~l~~~~~ 216 (221)
+.++|+ +|++++|++||++|.++++||++...
T Consensus 186 ~~~~~~~~~~~~~~~if~-gf~~~vLa~af~v~~~~~~kl~~~~~ 229 (476)
T 1fxz_A 186 QKGKHQQEEENEGGSILS-GFTLEFLEHAFSVDKQIAKNLQGENE 229 (476)
T ss_dssp ------------CCCGGG-GSCHHHHHHHHTCCHHHHHHHSCC--
T ss_pred cccccccccccccchhhh-cCCHHHHHhhhCCCHHHHHhhhcccc
Confidence 347997 99999999999999999999997654
No 19
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.91 E-value=1e-23 Score=194.44 Aligned_cols=138 Identities=19% Similarity=0.219 Sum_probs=120.6
Q ss_pred CCCeEEEEe--cCCCCCCccccc-eEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEE
Q 048761 74 DTGLATIPV--NPTVFPGINTLG-MSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMV 150 (221)
Q Consensus 74 ~~g~~v~~~--~~~~~P~l~~~g-~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~ 150 (221)
..++.+..+ +..+.|.|++.+ +++++++++||+..+|| |++++|++||++|+++++++++ ++.+.+.|++||+++
T Consensus 37 se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~ 114 (434)
T 2ea7_A 37 NEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVNP-DSRDSYILEQGHAQK 114 (434)
T ss_dssp ETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS-SCEEEEEEETTEEEE
T ss_pred cCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEeC-CCCEEEEeCCCCEEE
Confidence 578888887 446678999998 99999999999999999 7789999999999999999975 455689999999999
Q ss_pred EcCCCeEEEEecC-CCCEEEEEEEc-CCCCCce---eccc-----chhcCCCCHHHHHHHhCCCHHHHHHhh-hc
Q 048761 151 FPRGLMHFQMNVG-DEPATIFGSFN-SQNPGNQ---KIPS-----AIFGSGIDVELLEKAFGLSPKQIGTMR-RR 214 (221)
Q Consensus 151 ~P~G~~H~~~N~g-~~~a~~l~v~s-s~~pg~~---~~~~-----~lf~~~~p~evla~af~~~~~~v~~l~-~~ 214 (221)
||+|++||++|.| +++++++++++ +++||.+ .++. ++|+ ++|++||+++|++|.+++++|+ +.
T Consensus 115 iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~-~~~~~vLa~af~v~~~~v~~l~~~~ 188 (434)
T 2ea7_A 115 IPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLR-GFSKNILEASFDSDFKEINRVLFGE 188 (434)
T ss_dssp ECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGG-GSCHHHHHHHHTSCHHHHHHHHTCC
T ss_pred ECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhh-cCCHHHHHHHhCCCHHHHHhhhhcc
Confidence 9999999999998 88999999985 6777753 2332 4777 8999999999999999999999 54
No 20
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.91 E-value=1.2e-23 Score=194.51 Aligned_cols=138 Identities=13% Similarity=0.188 Sum_probs=119.6
Q ss_pred CCCeEEEEec--CCCCCCccccc-eEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEE
Q 048761 74 DTGLATIPVN--PTVFPGINTLG-MSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMV 150 (221)
Q Consensus 74 ~~g~~v~~~~--~~~~P~l~~~g-~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~ 150 (221)
..++.+..+. ..+.|.+++.+ +++++++++||+..+|| |++++|++||++|++++++++++++ +.+.+++||+++
T Consensus 62 ~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~~~~~-~~~~l~~GDv~~ 139 (445)
T 2cav_A 62 NQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQGDAIK 139 (445)
T ss_dssp ETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEETTEE-EEEEEETTEEEE
T ss_pred cCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEeCCCC-EEEEecCCCEEE
Confidence 4577777764 35567898887 99999999999999999 6679999999999999999987655 689999999999
Q ss_pred EcCCCeEEEEecC-CCCEEEEEEEc-CCCCCce---ecc-----cchhcCCCCHHHHHHHhCCCHHHHHHhhhc
Q 048761 151 FPRGLMHFQMNVG-DEPATIFGSFN-SQNPGNQ---KIP-----SAIFGSGIDVELLEKAFGLSPKQIGTMRRR 214 (221)
Q Consensus 151 ~P~G~~H~~~N~g-~~~a~~l~v~s-s~~pg~~---~~~-----~~lf~~~~p~evla~af~~~~~~v~~l~~~ 214 (221)
+|+|.+||++|.| +++++++++++ +++||.+ .++ .++|+ ++|++||+++|++|.+++++|++.
T Consensus 140 ~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~-~~~~~vLa~af~v~~~~v~~l~~~ 212 (445)
T 2cav_A 140 IQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS-AFSKNFLEASYDSPYDEIEQTLLQ 212 (445)
T ss_dssp ECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG-GSCHHHHHHHHTSCHHHHHHHTTS
T ss_pred ECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhh-cCCHHHHHHHhCCCHHHHHhhhcc
Confidence 9999999999998 89999999998 6678753 233 37887 899999999999999999999953
No 21
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.91 E-value=6.1e-24 Score=198.10 Aligned_cols=133 Identities=22% Similarity=0.424 Sum_probs=117.3
Q ss_pred EEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC-CceE-----------------
Q 048761 78 ATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS-SRVF----------------- 139 (221)
Q Consensus 78 ~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~-~k~~----------------- 139 (221)
.+++++....|+|+++|++++|++++||++++||+| +++|++||++|++.++++.++ ++.|
T Consensus 29 G~~e~~~~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~ 107 (496)
T 3ksc_A 29 GLIETWNPNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDR 107 (496)
T ss_dssp EEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTCCCC---------------CCC
T ss_pred cEEEeccccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccc
Confidence 456778889999999999999999999999999999 799999999999999999875 3433
Q ss_pred ---EEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcCCCCCce--------ecc------------------------
Q 048761 140 ---ARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNSQNPGNQ--------KIP------------------------ 184 (221)
Q Consensus 140 ---~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~~--------~~~------------------------ 184 (221)
.+.|++||+|+||+|++||++|.|+++++++++++..|+..+ .++
T Consensus 108 ~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~~~ 187 (496)
T 3ksc_A 108 HQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQEQENEG 187 (496)
T ss_dssp CCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC-----------C
T ss_pred hheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCccccccccccccccccccccC
Confidence 359999999999999999999999999999999987664332 111
Q ss_pred cchhcCCCCHHHHHHHhCCCHHHHHHhh
Q 048761 185 SAIFGSGIDVELLEKAFGLSPKQIGTMR 212 (221)
Q Consensus 185 ~~lf~~~~p~evla~af~~~~~~v~~l~ 212 (221)
.++|+ +|+.++|+.||+++.++++||+
T Consensus 188 ~ni~s-gF~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 188 NNIFS-GFKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp CSGGG-GSCHHHHHHHHTCCHHHHHHHT
T ss_pred CCchh-hcCHHHHHHHHCCCHHHHHHHH
Confidence 58998 9999999999999999999999
No 22
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.90 E-value=8.5e-24 Score=194.06 Aligned_cols=139 Identities=17% Similarity=0.216 Sum_probs=120.0
Q ss_pred CCCeEEEEe--cCCCCCCccccc-eEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEE
Q 048761 74 DTGLATIPV--NPTVFPGINTLG-MSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMV 150 (221)
Q Consensus 74 ~~g~~v~~~--~~~~~P~l~~~g-~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~ 150 (221)
..++.+..+ +....+.|++.+ +++++++++||+..+|| |++++|++||++|+++++++++ ++.+++.+++||+++
T Consensus 25 ~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~ 102 (416)
T 1uij_A 25 NQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVNN-DDRDSYNLHPGDAQR 102 (416)
T ss_dssp CSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEECS-SCEEEEEECTTEEEE
T ss_pred cCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEEC-CCCeEEEecCCCEEE
Confidence 578888887 334458888887 99999999999999999 7789999999999999999977 455689999999999
Q ss_pred EcCCCeEEEEecC-CCCEEEEEEEc-CCCCCce---eccc-----chhcCCCCHHHHHHHhCCCHHHHHHhh-hcC
Q 048761 151 FPRGLMHFQMNVG-DEPATIFGSFN-SQNPGNQ---KIPS-----AIFGSGIDVELLEKAFGLSPKQIGTMR-RRF 215 (221)
Q Consensus 151 ~P~G~~H~~~N~g-~~~a~~l~v~s-s~~pg~~---~~~~-----~lf~~~~p~evla~af~~~~~~v~~l~-~~~ 215 (221)
||+|.+||++|.| +++++++++++ +++||.+ .++. ++|+ ++|++||+++|++|.+++++|+ +..
T Consensus 103 iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~-~~~~~vLa~af~v~~~~v~~l~~~~~ 177 (416)
T 1uij_A 103 IPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQ-GFSHNILETSFHSEFEEINRVLFGEE 177 (416)
T ss_dssp ECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGG-GSCHHHHHHHHTSCHHHHHHHHTCTT
T ss_pred ECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhh-cCCHHHHHHHhCcCHHHHHhhhhccc
Confidence 9999999999994 99999999997 6777753 2332 4777 8999999999999999999999 543
No 23
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.90 E-value=3.2e-23 Score=193.66 Aligned_cols=138 Identities=21% Similarity=0.368 Sum_probs=117.7
Q ss_pred eEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-----------------c--
Q 048761 77 LATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS-----------------R-- 137 (221)
Q Consensus 77 ~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~-----------------k-- 137 (221)
+.+++++....|.|+++|+++++++++||++.+||||+ ++|++||++|++.++++.++. +
T Consensus 27 ~G~~e~~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~ 105 (493)
T 2d5f_A 27 GGLIETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQ 105 (493)
T ss_dssp SEEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC------------
T ss_pred CcEEEEeCCCChhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccc
Confidence 34466788888999999999999999999999999998 789999999999999996541 0
Q ss_pred ------eEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcCCCCC--------ceec--------------------
Q 048761 138 ------VFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNSQNPG--------NQKI-------------------- 183 (221)
Q Consensus 138 ------~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg--------~~~~-------------------- 183 (221)
...+.|++||+++||+|++||++|.|+++++++++++..|.. .+.+
T Consensus 106 ~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ 185 (493)
T 2d5f_A 106 QLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQQKS 185 (493)
T ss_dssp -CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC-------
T ss_pred ccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhcccccc
Confidence 024699999999999999999999999999999999854332 2222
Q ss_pred ---------------ccchhcCCCCHHHHHHHhCCCHHHHHHhhhcCC
Q 048761 184 ---------------PSAIFGSGIDVELLEKAFGLSPKQIGTMRRRFD 216 (221)
Q Consensus 184 ---------------~~~lf~~~~p~evla~af~~~~~~v~~l~~~~~ 216 (221)
+.++|+ +|++++|++||+++.++++||++...
T Consensus 186 ~~~~~~~~~~~~~~~~~nif~-gf~~e~La~aF~v~~~~v~kl~~~~~ 232 (493)
T 2d5f_A 186 HGGRKQGQHQQQEEEGGSVLS-GFSKHFLAQSFNTNEDTAEKLRSPDD 232 (493)
T ss_dssp --------------CCCCGGG-GSCHHHHHHHTTCCHHHHHHTTCTTC
T ss_pred cccccccccccccccccchhh-cCCHHHHHhHhCCCHHHHHHhhhccc
Confidence 347887 99999999999999999999998765
No 24
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.90 E-value=3.3e-23 Score=191.84 Aligned_cols=140 Identities=22% Similarity=0.401 Sum_probs=119.2
Q ss_pred CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC-CceE-------------
Q 048761 74 DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS-SRVF------------- 139 (221)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~-~k~~------------- 139 (221)
..|+.+.. +....+.|++.|++++|++++||++.+|||| ++.|++||++|++.++++.++ +++|
T Consensus 30 se~G~~e~-~d~~~~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~ 107 (465)
T 3qac_A 30 AERGLTEV-WDSNEQEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDE 107 (465)
T ss_dssp ETTEEEEE-CCTTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC-------------
T ss_pred CCCcEEEE-ECCCChhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceeecchhcccccccc
Confidence 45666554 5566788999999999999999999999999 799999999999999999764 3333
Q ss_pred -----------------------EEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcCCCCC---------ceecc---
Q 048761 140 -----------------------ARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNSQNPG---------NQKIP--- 184 (221)
Q Consensus 140 -----------------------~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg---------~~~~~--- 184 (221)
.+.+++||++++|+|++||++|.|++++++++++++.|+. .+.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG~~ 187 (465)
T 3qac_A 108 RIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAGKP 187 (465)
T ss_dssp -----------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSSCC
T ss_pred ccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecCCC
Confidence 4689999999999999999999999999999999976543 23332
Q ss_pred ---------------------cchhcCCCCHHHHHHHhCCCHHHHHHhhhcCC
Q 048761 185 ---------------------SAIFGSGIDVELLEKAFGLSPKQIGTMRRRFD 216 (221)
Q Consensus 185 ---------------------~~lf~~~~p~evla~af~~~~~~v~~l~~~~~ 216 (221)
.++|+ +++.++|++||+++.++++||++...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~ni~s-gF~~e~La~Af~v~~~~~~kl~~~q~ 239 (465)
T 3qac_A 188 QQEHSGEHQFSRESRRGERNTGNIFR-GFETRLLAESFGVSEEIAQKLQAEQD 239 (465)
T ss_dssp CCSCC--------------CCCCGGG-GSCHHHHHHHHTCCHHHHHHHHTTTC
T ss_pred ccccccccccccccccccccccchhh-cCCHHHHHHHhCCCHHHHHHhhhccc
Confidence 47888 99999999999999999999986643
No 25
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.89 E-value=3.1e-23 Score=189.14 Aligned_cols=136 Identities=15% Similarity=0.116 Sum_probs=119.9
Q ss_pred CCCeEEEEe--cCCCCCCccccc-eEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcE--
Q 048761 74 DTGLATIPV--NPTVFPGINTLG-MSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEV-- 148 (221)
Q Consensus 74 ~~g~~v~~~--~~~~~P~l~~~g-~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv-- 148 (221)
..++.++.+ +..+.|+|++++ +++++++++||++.+|||| +++|++||++|++++++++++++ +++.|++||+
T Consensus 28 ~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~v~~~~~-~~~~l~~GDv~~ 105 (397)
T 2phl_A 28 NQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVLVKPDDR-REYFFLTSDNPI 105 (397)
T ss_dssp ETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEEEETTTE-EEEEEEESSCTT
T ss_pred cCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEEEeCCCc-EEEEECCCCccc
Confidence 678888887 566779999998 9999999999999999999 59999999999999999998766 5899999999
Q ss_pred ----EEEcCCCeEEEEecC-CCCEEEEEEEcCCC-CCc--eecc-----cchhcCCCCHHHHHHHhCCCHHHHHHhh
Q 048761 149 ----MVFPRGLMHFQMNVG-DEPATIFGSFNSQN-PGN--QKIP-----SAIFGSGIDVELLEKAFGLSPKQIGTMR 212 (221)
Q Consensus 149 ----~~~P~G~~H~~~N~g-~~~a~~l~v~ss~~-pg~--~~~~-----~~lf~~~~p~evla~af~~~~~~v~~l~ 212 (221)
++||+|++||++|.| ++++++++++++.+ |.. +.++ .++|+ ++|++||+++|++|.+++++|+
T Consensus 106 ~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~-~~~~~vLa~af~v~~~~v~~l~ 181 (397)
T 2phl_A 106 FSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQ-EFSKHILEASFNSKFEEINRVL 181 (397)
T ss_dssp SCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGG-GSCHHHHHHHHTSCHHHHHHHH
T ss_pred ccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhh-cCCHHHHHHHhCCCHHHHHhhh
Confidence 999999999999999 88999999988544 422 2232 35776 8999999999999999999999
No 26
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.89 E-value=7.6e-23 Score=187.69 Aligned_cols=135 Identities=17% Similarity=0.272 Sum_probs=112.9
Q ss_pred CCCeEEEEec-----CCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcE
Q 048761 74 DTGLATIPVN-----PTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEV 148 (221)
Q Consensus 74 ~~g~~v~~~~-----~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv 148 (221)
...+.++.+. ...+|+|+ ++.+++++++||++++|| |++++|++||++|++++++++++ +.+.+.|++||+
T Consensus 20 se~G~i~~l~~f~~~s~~l~~l~--~~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~~-~~~~~~l~~GDv 95 (418)
T 3s7i_A 20 NQNGRIRVLQRFDQRSRQFQNLQ--NHRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANGN-NRKSFNLDEGHA 95 (418)
T ss_dssp CSSEEEEEECCHHHHCGGGGGGT--TCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECSS-CEEEEEEETTEE
T ss_pred cCCcEEEEecccCCcchhccccc--ceEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEecC-CEEEEEecCCCE
Confidence 6778888874 24567766 467778999999999999 88999999999999999999874 556899999999
Q ss_pred EEEcCCCeEEEEecCCC-CEEEEE-EEcCCCCCceec--------ccchhcCCCCHHHHHHHhCCCHHHHHHhhh
Q 048761 149 MVFPRGLMHFQMNVGDE-PATIFG-SFNSQNPGNQKI--------PSAIFGSGIDVELLEKAFGLSPKQIGTMRR 213 (221)
Q Consensus 149 ~~~P~G~~H~~~N~g~~-~a~~l~-v~ss~~pg~~~~--------~~~lf~~~~p~evla~af~~~~~~v~~l~~ 213 (221)
++||+|++||++|.|+. .+++++ ..++++||.+.. ..++|+ ++|+|||++||+++.+++++|+.
T Consensus 96 ~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~-gf~~evLa~af~v~~~~v~kl~~ 169 (418)
T 3s7i_A 96 LRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQ-GFSRNTLEAAFNAEFNEIRRVLL 169 (418)
T ss_dssp EEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGG-GSCHHHHHHHHTSCHHHHHHHTT
T ss_pred EEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhh-cCCHHHHHHHHCcCHHHHHhhhc
Confidence 99999999999998754 566665 356778987432 236887 89999999999999999999984
No 27
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.88 E-value=2.6e-22 Score=187.76 Aligned_cols=138 Identities=20% Similarity=0.332 Sum_probs=117.4
Q ss_pred eEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce------------------
Q 048761 77 LATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV------------------ 138 (221)
Q Consensus 77 ~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~------------------ 138 (221)
+.+++++..+.|+|++.|++++|++++||++.+||||+ +.|++||++|++.++++.+++..
T Consensus 30 ~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~ 108 (510)
T 3c3v_A 30 GGYIETWNPNNQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPP 108 (510)
T ss_dssp TEEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECTTCCCCEEEECCC----------
T ss_pred CceEEEeCCCCcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccc
Confidence 34466788888999999999999999999999999997 89999999999999999864200
Q ss_pred -----------------EEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcCCCCCce--------ec----------
Q 048761 139 -----------------FARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNSQNPGNQ--------KI---------- 183 (221)
Q Consensus 139 -----------------~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~~--------~~---------- 183 (221)
+.+.|++||+++||+|++||++|.|++++++|++++..|+..+ .+
T Consensus 109 ~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~~~~~ 188 (510)
T 3c3v_A 109 RRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQEFLR 188 (510)
T ss_dssp ----------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCCTTGG
T ss_pred ccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCcccccch
Confidence 1378999999999999999999999999999999997654221 12
Q ss_pred --------------------------------------------------ccchhcCCCCHHHHHHHhCCC-HHHHHHhh
Q 048761 184 --------------------------------------------------PSAIFGSGIDVELLEKAFGLS-PKQIGTMR 212 (221)
Q Consensus 184 --------------------------------------------------~~~lf~~~~p~evla~af~~~-~~~v~~l~ 212 (221)
+.++|+ +++.++|++||+++ .+++++|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~s-gF~~~~La~af~v~~~~~~~~l~ 267 (510)
T 3c3v_A 189 YQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFS-GFTPEFLAQAFQVDDRQIVQNLR 267 (510)
T ss_dssp GCC------------------------------------------------CCTGG-GSCHHHHHHHHTCCCHHHHHHHT
T ss_pred hhhcccccccccccccccccccccccccccccccccccccccccccccccccccee-cCCHHHHHHHhCCCHHHHHHHhh
Confidence 136887 99999999999999 99999998
Q ss_pred hcCC
Q 048761 213 RRFD 216 (221)
Q Consensus 213 ~~~~ 216 (221)
+.-.
T Consensus 268 ~~~~ 271 (510)
T 3c3v_A 268 GENE 271 (510)
T ss_dssp TTTC
T ss_pred cccc
Confidence 6543
No 28
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.87 E-value=7.1e-22 Score=182.97 Aligned_cols=140 Identities=21% Similarity=0.344 Sum_probs=117.8
Q ss_pred CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-ceE-------------
Q 048761 74 DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS-RVF------------- 139 (221)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~-k~~------------- 139 (221)
..++.+.. +...-|+|+++|++++|++++|||+++||+|+ ++|++||++|+++++++.++. +.|
T Consensus 23 se~G~~e~-w~~~~~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~ 100 (466)
T 3kgl_A 23 AEAGRIEV-WDHHAPQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSP 100 (466)
T ss_dssp ETTEEEEE-CCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC---
T ss_pred CCCcEEEE-ECCCChhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhcccccccccccc
Confidence 45666555 44556999999999999999999999999998 999999999999999997631 111
Q ss_pred ---------------------------------------------EEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEc
Q 048761 140 ---------------------------------------------ARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFN 174 (221)
Q Consensus 140 ---------------------------------------------~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~s 174 (221)
.+.|++||+++||+|++||++|.|+++++++++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d 180 (466)
T 3kgl_A 101 FGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLD 180 (466)
T ss_dssp --------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEc
Confidence 14899999999999999999999999999999998
Q ss_pred CCCCCc--------eecc------------------cchhcCCCCHHHHHHHhCCCHHHHHHhhhcCC
Q 048761 175 SQNPGN--------QKIP------------------SAIFGSGIDVELLEKAFGLSPKQIGTMRRRFD 216 (221)
Q Consensus 175 s~~pg~--------~~~~------------------~~lf~~~~p~evla~af~~~~~~v~~l~~~~~ 216 (221)
..|+.. +.++ .++|+ +++.++|++||+++.++++||+....
T Consensus 181 ~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~s-GF~~e~La~Af~v~~e~~~kL~~~q~ 247 (466)
T 3kgl_A 181 LASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILN-GFTPEVLAKAFKIDVRTAQQLQNQQD 247 (466)
T ss_dssp SSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGG-GSCHHHHHHHHTSCHHHHHHHTCTTC
T ss_pred CCCcccccCCceeeeEecCCCccccccccccccccCCCccc-cCCHHHHHHHhCCCHHHHHHHhcccc
Confidence 665432 2222 37887 99999999999999999999987643
No 29
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.87 E-value=7.8e-22 Score=184.27 Aligned_cols=140 Identities=21% Similarity=0.330 Sum_probs=117.7
Q ss_pred CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC-Cce--------------
Q 048761 74 DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS-SRV-------------- 138 (221)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~-~k~-------------- 138 (221)
..|+ +++++..++|+|+++|++++|+++.|+|+++||+|+ ++|++||++|++.++++.+. .++
T Consensus 28 se~G-~~e~w~~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~ 105 (531)
T 3fz3_A 28 AEAG-QIETWNFNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQ 105 (531)
T ss_dssp ETTE-EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC--------
T ss_pred cCCc-eEEEeCCCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCccccccccccccccccc
Confidence 4455 456677889999999999999999999999999998 99999999999999999763 111
Q ss_pred ------------------------------------------------------------------EEEEecCCcEEEEc
Q 048761 139 ------------------------------------------------------------------FARVIKQGEVMVFP 152 (221)
Q Consensus 139 ------------------------------------------------------------------~~~~L~~GDv~~~P 152 (221)
..+.+++||++.+|
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviaiP 185 (531)
T 3fz3_A 106 EQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAIP 185 (531)
T ss_dssp -----------------------------------------------------------CCSCEESCCEEEETTEEEEEC
T ss_pred cccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEEC
Confidence 13678999999999
Q ss_pred CCCeEEEEecCCCCEEEEEEEcCCCCCc--------ee------------------------------------------
Q 048761 153 RGLMHFQMNVGDEPATIFGSFNSQNPGN--------QK------------------------------------------ 182 (221)
Q Consensus 153 ~G~~H~~~N~g~~~a~~l~v~ss~~pg~--------~~------------------------------------------ 182 (221)
+|+.||++|.|+++++++++++..|.-. +.
T Consensus 186 aG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (531)
T 3fz3_A 186 AGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQQ 265 (531)
T ss_dssp TTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC-------------------------------
T ss_pred CCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchhhhc
Confidence 9999999999999999999997544211 11
Q ss_pred -cccchhcCCCCHHHHHHHhCCCHHHHHHhhhcCC
Q 048761 183 -IPSAIFGSGIDVELLEKAFGLSPKQIGTMRRRFD 216 (221)
Q Consensus 183 -~~~~lf~~~~p~evla~af~~~~~~v~~l~~~~~ 216 (221)
...++|+ +|+.++|++||+++.++++||+..-.
T Consensus 266 ~~~~nifs-GFs~e~La~A~~v~~~~a~kLq~~~~ 299 (531)
T 3fz3_A 266 GNGNNVFS-GFNTQLLAQALNVNEETARNLQGQND 299 (531)
T ss_dssp -CCSSGGG-GSCHHHHHHHHTSCHHHHHHHHTSSC
T ss_pred ccCCCeee-cCCHHHHHHHHCCCHHHHHHHhcccc
Confidence 1247998 99999999999999999999996543
No 30
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.85 E-value=2.4e-20 Score=166.52 Aligned_cols=150 Identities=24% Similarity=0.352 Sum_probs=126.3
Q ss_pred eEEecCCCCCCcCCCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEE
Q 048761 61 FVFSGLKSAGNFSDTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFA 140 (221)
Q Consensus 61 f~~~~l~~~~~~~~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~ 140 (221)
+.|+.-..+... ..|+.++.+...++|.+. ++++.+++++||+..++|||+++.|++||++|++++++++++++...
T Consensus 21 ~~~~~~~~~~~~-~~~G~~~~~~~~~~p~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~ 97 (361)
T 2vqa_A 21 FTYAFSKTPLVL-YDGGTTKQVGTYNFPVSK--GMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEI 97 (361)
T ss_dssp SEECGGGSCCEE-ETTEEEEEESTTTCTTCC--SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEE
T ss_pred eEEEcccCCcee-cCCceEEEeChhhCcccc--ceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEE
Confidence 667754333222 578888999999999886 47899999999999999999988999999999999999876664346
Q ss_pred EEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcCCCCC---ceecccchhcCCCCHHHHHHHhCCCHHHHHHhhhcC
Q 048761 141 RVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNSQNPG---NQKIPSAIFGSGIDVELLEKAFGLSPKQIGTMRRRF 215 (221)
Q Consensus 141 ~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg---~~~~~~~lf~~~~p~evla~af~~~~~~v~~l~~~~ 215 (221)
+.|++||+++||+|.+|+++|.++++++++.+++..++. .+... ++|+ .+|.++|+++|+++.+.+++|++..
T Consensus 98 ~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~-~~~~-~~p~~vLa~~~~v~~~~~~~l~~~~ 173 (361)
T 2vqa_A 98 ADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSVT-DWLS-HTPIAWVEENLGWTAAQVAQLPKKQ 173 (361)
T ss_dssp EEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEHH-HHHH-TSCHHHHHHHHTCCHHHHTTSCSSC
T ss_pred EEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecHh-HHHH-hCCHHHHHHHhCcCHHHHHhccccC
Confidence 899999999999999999999999999999999877664 34444 5566 7999999999999999999997654
No 31
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.81 E-value=7.5e-19 Score=158.40 Aligned_cols=156 Identities=17% Similarity=0.275 Sum_probs=127.5
Q ss_pred CCCCeEEecCCCCCCcCCCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC
Q 048761 57 TTDDFVFSGLKSAGNFSDTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS 136 (221)
Q Consensus 57 t~~df~~~~l~~~~~~~~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~ 136 (221)
.+..|+|+....+. ....++.++.+....++..+ ++.+.+++++||+..++|||+.+.|++||++|++++.+.+.+|
T Consensus 222 ~~~~~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g 298 (385)
T 1j58_A 222 VPYPFTYRLLEQEP-IESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDG 298 (385)
T ss_dssp CSSCSEEEGGGSCC-EECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETT
T ss_pred CCCCeeeecccCCC-eeCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCC
Confidence 35567887654443 22456677777777777543 5889999999999999999997699999999999999986555
Q ss_pred ceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcCCCCCceecccchhcCCCCHHHHHHHhCCCHHHHHHhhhcCC
Q 048761 137 RVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNSQNPGNQKIPSAIFGSGIDVELLEKAFGLSPKQIGTMRRRFD 216 (221)
Q Consensus 137 k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~~~~~~~lf~~~~p~evla~af~~~~~~v~~l~~~~~ 216 (221)
+...+.|++||++++|+|..|++.|.+++++++++++....+....+..++ + .+|.++++++|+++.+++++|++...
T Consensus 299 ~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~~~l-~-~~~~~v~~~~f~~~~~~~~~l~~~~~ 376 (385)
T 1j58_A 299 HARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQWL-A-MLPETFVQAHLDLGKDFTDVLSKEKH 376 (385)
T ss_dssp EEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHHHHH-H-TSCHHHHHHHHTCCHHHHTTCCSSCC
T ss_pred cEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHHHHH-H-hCCHHHHHHHhCCCHHHHHhhhccCC
Confidence 434699999999999999999999999999999999998777666665555 4 69999999999999999999987654
Q ss_pred C
Q 048761 217 P 217 (221)
Q Consensus 217 ~ 217 (221)
+
T Consensus 377 ~ 377 (385)
T 1j58_A 377 P 377 (385)
T ss_dssp S
T ss_pred c
Confidence 3
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.79 E-value=6.9e-19 Score=158.65 Aligned_cols=148 Identities=23% Similarity=0.354 Sum_probs=123.8
Q ss_pred eEEecCCCCCCcCCCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEE
Q 048761 61 FVFSGLKSAGNFSDTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFA 140 (221)
Q Consensus 61 f~~~~l~~~~~~~~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~ 140 (221)
+.|+.-..+... ..|+.++.+....+|.++ ++++.+++++||+..++|||+ +.|++||++|++++++++.+|+.+.
T Consensus 48 ~~~~~~~~~~~~-~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~g~~~~ 123 (385)
T 1j58_A 48 MKFSFSDTHNRL-EKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEKGRSFI 123 (385)
T ss_dssp CEECGGGSCCEE-ETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTTSCEEE
T ss_pred eEEEcccCCccc-cCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCCCcEEE
Confidence 667654333322 678999999999999987 689999999999999999999 8999999999999999877677555
Q ss_pred EEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcCCCCCcee--cccchhcCCCCHHHHHHHhCCCHHHHHHhhhc
Q 048761 141 RVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNSQNPGNQK--IPSAIFGSGIDVELLEKAFGLSPKQIGTMRRR 214 (221)
Q Consensus 141 ~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~~~--~~~~lf~~~~p~evla~af~~~~~~v~~l~~~ 214 (221)
+.|++||+++||+|.+|++.|.+ ++++++.+++...+.... ...++|+ .+|.++|+++|+++.++++++++.
T Consensus 124 ~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~p~evla~~~~vs~~~~~~l~~~ 197 (385)
T 1j58_A 124 DDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLTDWLA-HTPKEVIAANFGVTKEEISNLPGK 197 (385)
T ss_dssp EEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHHHHHH-TSCHHHHHHHHTCCTGGGTTSCSS
T ss_pred EEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhhhhhh-cccHHHHHHHhCCCHHHHHhcccc
Confidence 79999999999999999999987 468999999877665432 1245666 899999999999999999988653
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.71 E-value=9.5e-18 Score=120.36 Aligned_cols=75 Identities=19% Similarity=0.226 Sum_probs=64.0
Q ss_pred EecCCCCCCcCCCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCc
Q 048761 63 FSGLKSAGNFSDTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSR 137 (221)
Q Consensus 63 ~~~l~~~~~~~~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k 137 (221)
|+.+.+.+.+++..++++.+++.++|+|+++|++++|+++.||++++||||++|+|++||++|++++++++++|+
T Consensus 4 fnl~~~~p~~~n~~G~~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g~ 78 (79)
T 1dgw_X 4 FNLRSRDPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQ 78 (79)
T ss_dssp EETTSSCCSEECSSEEEEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC--
T ss_pred cccccCCCCccCCCCcEEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCCCC
Confidence 555556666664444459999999999999999999999999999999999999999999999999999986543
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.60 E-value=6.5e-15 Score=112.00 Aligned_cols=85 Identities=21% Similarity=0.243 Sum_probs=74.2
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSF 173 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ 173 (221)
++.+.+++++||+..++|+|+...|++||++|++++.+. +++ .+.|++||++++|+|.+|++.|.+++++++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~--~~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~ 113 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQG--NGI--VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVV 113 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECS--TTC--EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEEC--CCe--EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEE
Confidence 578999999999999999999669999999999998762 255 4899999999999999999999999999999999
Q ss_pred cCCCCCcee
Q 048761 174 NSQNPGNQK 182 (221)
Q Consensus 174 ss~~pg~~~ 182 (221)
....+++..
T Consensus 114 ~p~~~~~~~ 122 (125)
T 3h8u_A 114 APGNAGFAL 122 (125)
T ss_dssp ESTTCCCCC
T ss_pred CCCcccchh
Confidence 877666553
No 35
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.53 E-value=1.6e-13 Score=110.86 Aligned_cols=116 Identities=14% Similarity=0.147 Sum_probs=90.4
Q ss_pred CCCCCCCeEEecCCCCC---CcC-CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEE
Q 048761 54 SEATTDDFVFSGLKSAG---NFS-DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYS 129 (221)
Q Consensus 54 ~~vt~~df~~~~l~~~~---~~~-~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v 129 (221)
..+..+++.|.++.... ..+ ..|...+.+..... +....++.+.+++++||+..++|+|+ ..|++||++|++++
T Consensus 12 ~iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~ 89 (167)
T 3ibm_A 12 RVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAEV 89 (167)
T ss_dssp EEECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEEE
T ss_pred ceeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEEE
Confidence 45678888998754311 111 45666665553332 22334788999999999999999997 79999999999999
Q ss_pred EEEeCCCceEEEEecCCcEEEEcCCCeEEEEecC-CCCEEEEEEEcCC
Q 048761 130 GFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVG-DEPATIFGSFNSQ 176 (221)
Q Consensus 130 ~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g-~~~a~~l~v~ss~ 176 (221)
.+. ++ .+.|++||+++||+|.+|++.|.+ ++++++++++...
T Consensus 90 ~i~---~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 90 VLD---DR--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp EET---TE--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred EEC---CE--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 875 45 499999999999999999999999 9999999998854
No 36
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.52 E-value=3.6e-14 Score=103.98 Aligned_cols=77 Identities=13% Similarity=0.093 Sum_probs=68.0
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-ceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS-RVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~-k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
..+.+.+++++||+..++|.|+...|++||++|++++.+.+ + + .+.|++||++++|+|..|+..|.|+++++++.
T Consensus 16 ~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~--g~~--~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~ 91 (97)
T 2fqp_A 16 ERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPE--GSV--TSQLTRGVSYTRPEGVEHNVINPSDTEFVFVE 91 (97)
T ss_dssp SSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETT--EEE--EEEECTTCCEEECTTCEEEEECCSSSCEEEEE
T ss_pred CeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCC--CCE--EEEEcCCCEEEeCCCCcccCEeCCCCcEEEEE
Confidence 36889999999999999999996557999999999998752 2 3 48999999999999999999999999999887
Q ss_pred EE
Q 048761 172 SF 173 (221)
Q Consensus 172 v~ 173 (221)
+-
T Consensus 92 v~ 93 (97)
T 2fqp_A 92 IE 93 (97)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 37
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.52 E-value=8.9e-14 Score=110.72 Aligned_cols=80 Identities=20% Similarity=0.195 Sum_probs=71.7
Q ss_pred ceEEEEEEecCCC-cCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCC-CeEEEEecCCCCEEEEE
Q 048761 94 GMSFVRADLRVGA-INPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRG-LMHFQMNVGDEPATIFG 171 (221)
Q Consensus 94 g~s~~rv~l~pgg-~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G-~~H~~~N~g~~~a~~l~ 171 (221)
++.+.+++++||+ ..++|||+...|++||++|++++.+. ++ .+.|++||++++|+| ..|++.|.+++++++++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~---~~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~ 119 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTME---ND--QYPIAPGDFVGFPCHAAAHSISNDGTETLVCLV 119 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTSCCEEEECCSSSCEEEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEEC---CE--EEEeCCCCEEEECCCCceEEeEeCCCCCEEEEE
Confidence 6789999999999 48999997689999999999999875 45 499999999999998 99999999999999999
Q ss_pred EEcCCCC
Q 048761 172 SFNSQNP 178 (221)
Q Consensus 172 v~ss~~p 178 (221)
+.....+
T Consensus 120 v~~p~~~ 126 (162)
T 3l2h_A 120 IGQRLDQ 126 (162)
T ss_dssp EEECCSE
T ss_pred EECCCCC
Confidence 9886543
No 38
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.50 E-value=1.2e-13 Score=100.32 Aligned_cols=79 Identities=19% Similarity=0.226 Sum_probs=70.5
Q ss_pred ccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 92 TLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
+.++.+.++.++||...++|+|+...|++||++|++++.+. ++ .+.+++||++++|+|..|.+.|.++++++++.
T Consensus 25 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~ 99 (105)
T 1v70_A 25 SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVG---EE--EALLAPGMAAFAPAGAPHGVRNESASPALLLV 99 (105)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTSCEEEECCSSSCEEEEE
T ss_pred CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 34688999999999999999998668999999999999874 44 49999999999999999999999999999998
Q ss_pred EEcC
Q 048761 172 SFNS 175 (221)
Q Consensus 172 v~ss 175 (221)
++..
T Consensus 100 v~~p 103 (105)
T 1v70_A 100 VTAP 103 (105)
T ss_dssp EEES
T ss_pred EeCC
Confidence 8763
No 39
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.50 E-value=1.6e-14 Score=107.12 Aligned_cols=79 Identities=14% Similarity=0.059 Sum_probs=68.8
Q ss_pred ccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 92 TLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
+..+.+.|++++||+..++|+|+...|+++|++|++++...+ ++.....+++||++++|+|..|++.|.|++++++|.
T Consensus 14 n~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d--~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~Ie 91 (98)
T 3lag_A 14 NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPD--GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTT--SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEE
T ss_pred CCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCC--CceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEE
Confidence 346899999999999999999998889999999999987643 443346799999999999999999999999999997
Q ss_pred E
Q 048761 172 S 172 (221)
Q Consensus 172 v 172 (221)
+
T Consensus 92 V 92 (98)
T 3lag_A 92 I 92 (98)
T ss_dssp E
T ss_pred E
Confidence 6
No 40
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.50 E-value=4.4e-14 Score=120.73 Aligned_cols=82 Identities=18% Similarity=0.239 Sum_probs=70.7
Q ss_pred ccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEE--------EeC-------CCceEEEEecCCcEEEEcCCCe
Q 048761 92 TLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGF--------VDS-------SSRVFARVIKQGEVMVFPRGLM 156 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~--------~~~-------~~k~~~~~L~~GDv~~~P~G~~ 156 (221)
+.++++.+++++||+..++|+|++..|++||++|++++.+ .+. +++.+.+.+++||++++|+|.+
T Consensus 40 ~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~ 119 (239)
T 2xlg_A 40 DIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYM 119 (239)
T ss_dssp TEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEE
T ss_pred CCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCC
Confidence 3468999999999999999999988999999999999987 321 1233468999999999999999
Q ss_pred EEEEecCCCCEEE-EEEE
Q 048761 157 HFQMNVGDEPATI-FGSF 173 (221)
Q Consensus 157 H~~~N~g~~~a~~-l~v~ 173 (221)
|.+.|.+++++++ +.++
T Consensus 120 H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 120 HGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EEEECCSSSCEEEEEEEE
T ss_pred EEEEeCCCCCEEEEEEEE
Confidence 9999999999998 6666
No 41
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.47 E-value=5.8e-13 Score=104.78 Aligned_cols=84 Identities=15% Similarity=0.253 Sum_probs=71.8
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-ceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS-RVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~-k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
.++.+.+++++||...++|+|+...|++||++|++++.+.+... ..+++.|++||++++|+|.+|.+.|.+++++++++
T Consensus 41 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~ 120 (148)
T 2oa2_A 41 DHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYS 120 (148)
T ss_dssp SSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred CceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEE
Confidence 35788899999999999999987679999999999999874211 11348999999999999999999999999999998
Q ss_pred EEcCC
Q 048761 172 SFNSQ 176 (221)
Q Consensus 172 v~ss~ 176 (221)
++...
T Consensus 121 i~~~~ 125 (148)
T 2oa2_A 121 IYAPP 125 (148)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 87753
No 42
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.47 E-value=1.9e-13 Score=111.41 Aligned_cols=80 Identities=23% Similarity=0.310 Sum_probs=72.7
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
.|..+.+++++||+..++|.|. ..|++||++|++++.+.+ ++ .+.|++||++ ||+|..|.++|.++++++++++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~-~eE~~~VLeGel~l~ld~--ge--~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V 150 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTN-SIDYGIVLEGEIELELDD--GA--KRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFI 150 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCS-EEEEEEEEESCEEEECGG--GC--EEEECTTCEE-EECSCCBEEECCSSSCEEEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecC-ceEEEEEEeCEEEEEECC--Ce--EEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEE
Confidence 4889999999999999999997 689999999999998752 34 4899999999 9999999999999999999999
Q ss_pred EcCCCC
Q 048761 173 FNSQNP 178 (221)
Q Consensus 173 ~ss~~p 178 (221)
+....|
T Consensus 151 ~~P~~p 156 (172)
T 3es1_A 151 LIEAPA 156 (172)
T ss_dssp EEECCC
T ss_pred EcCCCc
Confidence 997776
No 43
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.46 E-value=1.3e-12 Score=107.46 Aligned_cols=84 Identities=20% Similarity=0.317 Sum_probs=74.3
Q ss_pred cceEEEEEEecCCCc------CCCccCCC--CcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCC
Q 048761 93 LGMSFVRADLRVGAI------NPPHFHPR--ATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGD 164 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~------~ppH~Hp~--a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~ 164 (221)
.++.+..++++||+. .++|+|+. ..|++||++|++++.+.+..|+.+.+.|++||++++|+|..|+..|.++
T Consensus 65 ~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~ 144 (190)
T 1x82_A 65 GDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGD 144 (190)
T ss_dssp TCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSS
T ss_pred CCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCc
Confidence 357888889999988 78999983 4799999999999999876566667999999999999999999999999
Q ss_pred CCEEEEEEEcCC
Q 048761 165 EPATIFGSFNSQ 176 (221)
Q Consensus 165 ~~a~~l~v~ss~ 176 (221)
+++++++++...
T Consensus 145 ~~~~~l~v~~~~ 156 (190)
T 1x82_A 145 EPFIFLAIYPAD 156 (190)
T ss_dssp SCEEEEEEEETT
T ss_pred ccEEEEEEECCC
Confidence 999999988753
No 44
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.46 E-value=3.5e-13 Score=108.26 Aligned_cols=81 Identities=22% Similarity=0.234 Sum_probs=72.1
Q ss_pred cceEEEEEEecCCCcC-CCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCC--CeEEEEecCCCCEEE
Q 048761 93 LGMSFVRADLRVGAIN-PPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRG--LMHFQMNVGDEPATI 169 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~-ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G--~~H~~~N~g~~~a~~ 169 (221)
..+.+.+++++||+.. ++|+|+..+|++||++|++++.+. ++ .+.|++||+++||+| ..|.+.|.+++++++
T Consensus 41 ~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~---~~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~ 115 (163)
T 3i7d_A 41 SQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDD---QG--EHPMVPGDCAAFPAGDPNGHQFVNRTDAPATF 115 (163)
T ss_dssp CSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCCCBEEECCSSSCEEE
T ss_pred CeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEEC---CE--EEEeCCCCEEEECCCCCcceEEEECCCCCEEE
Confidence 3688999999999965 799998667999999999999985 45 499999999999999 999999999999999
Q ss_pred EEEEcCCCC
Q 048761 170 FGSFNSQNP 178 (221)
Q Consensus 170 l~v~ss~~p 178 (221)
+++.+....
T Consensus 116 l~v~~p~~~ 124 (163)
T 3i7d_A 116 LVVGTRTPT 124 (163)
T ss_dssp EEEEECCSC
T ss_pred EEEECCCCC
Confidence 999886544
No 45
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.45 E-value=6.6e-13 Score=98.04 Aligned_cols=78 Identities=18% Similarity=0.242 Sum_probs=70.1
Q ss_pred cceEEEEEEecCCCcCCCc--cCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEE
Q 048761 93 LGMSFVRADLRVGAINPPH--FHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIF 170 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH--~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 170 (221)
.++.+.+++++||...++| +|++..|++||++|++++.+. ++ .+.|++||++++|+|..|.+.|.++++++++
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~ 93 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVD---GH--TQALQAGSLIAIERGQAHEIRNTGDTPLKTV 93 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEET---TE--EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEcCCCCCEEEE
Confidence 4688999999999998888 998679999999999999874 45 4899999999999999999999999999999
Q ss_pred EEEcC
Q 048761 171 GSFNS 175 (221)
Q Consensus 171 ~v~ss 175 (221)
.++..
T Consensus 94 ~v~~~ 98 (113)
T 2gu9_A 94 NFYHP 98 (113)
T ss_dssp EEEES
T ss_pred EEECC
Confidence 88774
No 46
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.45 E-value=3.2e-13 Score=104.46 Aligned_cols=83 Identities=20% Similarity=0.277 Sum_probs=73.1
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEE--EEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSG--FVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIF 170 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~--~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 170 (221)
..+.+.+++++||+..++|+|+ ..|++||++|++++. +. ++ .+.+++||++++|+|..|.+.|.++++++++
T Consensus 37 ~~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l 110 (145)
T 3ht1_A 37 DRFVLTEFEVSPNGSTPPHFHE-WEHEIYVLEGSMGLVLPDQ---GR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFL 110 (145)
T ss_dssp CSEEEEEEEEEEEEECCCEECS-SCEEEEEEEECEEEEEGGG---TE--EEEECTTCEEEECTTCCBEEECCTTCCEEEE
T ss_pred CcEEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEeEC---CE--EEEECCCCEEEECCCCeEEeEcCCCCCEEEE
Confidence 3688999999999999999998 578899999999988 53 45 4999999999999999999999999999999
Q ss_pred EEEcCCCCCce
Q 048761 171 GSFNSQNPGNQ 181 (221)
Q Consensus 171 ~v~ss~~pg~~ 181 (221)
.++....|...
T Consensus 111 ~i~~~~~~~~~ 121 (145)
T 3ht1_A 111 VVAPCERPPVR 121 (145)
T ss_dssp EEEESCCCCCE
T ss_pred EEECCCCCCee
Confidence 99887655543
No 47
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.44 E-value=6.9e-13 Score=105.75 Aligned_cols=82 Identities=17% Similarity=0.108 Sum_probs=71.2
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC----CceEEEEecCCcEEEEcCCCeEEEEecC-CCCEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS----SRVFARVIKQGEVMVFPRGLMHFQMNVG-DEPAT 168 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~----~k~~~~~L~~GDv~~~P~G~~H~~~N~g-~~~a~ 168 (221)
++.+.+++++||+..++|+|+ ..|++||++|++++.+.+.+ ++...+.|++||++++|+|..|++.|.+ +++++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHS-CEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEES-SCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeECC-CCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 578899999999999999997 68999999999999987421 1113589999999999999999999999 89999
Q ss_pred EEEEEcCC
Q 048761 169 IFGSFNSQ 176 (221)
Q Consensus 169 ~l~v~ss~ 176 (221)
+++++...
T Consensus 119 ~l~i~~~~ 126 (163)
T 1lr5_A 119 VLVIISRP 126 (163)
T ss_dssp EEEEEESS
T ss_pred EEEEECCC
Confidence 99888754
No 48
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.43 E-value=4.7e-13 Score=101.17 Aligned_cols=76 Identities=16% Similarity=0.190 Sum_probs=65.3
Q ss_pred ccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 92 TLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
+.++.+.+++++||...++|+|+ ..|++||++|++++.+. ++ .+.|++||.+++|+|.+|.+.|.++..+.++.
T Consensus 33 ~~~~~v~~~~l~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~ 106 (114)
T 3fjs_A 33 EHRLEVMRMVLPAGKQVGSHSVA-GPSTIQCLEGEVEIGVD---GA--QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTV 106 (114)
T ss_dssp ETTEEEEEEEECTTCEEEEECCS-SCEEEEEEESCEEEEET---TE--EEEECTTEEEEECTTCCEEEEESSSEEEEEEE
T ss_pred CCCEEEEEEEECCCCccCceeCC-CcEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEeCCCcEEEEEE
Confidence 34789999999999999999998 58999999999999885 45 49999999999999999999998765555544
Q ss_pred EE
Q 048761 172 SF 173 (221)
Q Consensus 172 v~ 173 (221)
++
T Consensus 107 v~ 108 (114)
T 3fjs_A 107 VL 108 (114)
T ss_dssp EC
T ss_pred Ee
Confidence 43
No 49
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.41 E-value=8.3e-13 Score=100.22 Aligned_cols=77 Identities=17% Similarity=0.317 Sum_probs=69.1
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
.++.+.+++++||+..++|+|+ ..|++||++|++++.+. ++ .+.|++||++++|+|..|.+.|.++ +++++.+
T Consensus 39 ~~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v 111 (126)
T 4e2g_A 39 KNLMLNWVRIEPNTEMPAHEHP-HEQAGVMLEGTLELTIG---EE--TRVLRPGMAYTIPGGVRHRARTFED-GCLVLDI 111 (126)
T ss_dssp SSCEEEEEEECTTCEEEEECCS-SEEEEEEEEECEEEEET---TE--EEEECTTEEEEECTTCCEEEECCTT-CEEEEEE
T ss_pred CCeEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEECCC-CEEEEEE
Confidence 3688999999999999999998 59999999999999885 45 4899999999999999999999987 8899988
Q ss_pred EcCC
Q 048761 173 FNSQ 176 (221)
Q Consensus 173 ~ss~ 176 (221)
+...
T Consensus 112 ~~p~ 115 (126)
T 4e2g_A 112 FSPP 115 (126)
T ss_dssp EESC
T ss_pred ECCC
Confidence 8753
No 50
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.41 E-value=2.8e-13 Score=100.56 Aligned_cols=79 Identities=13% Similarity=0.023 Sum_probs=65.6
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
..+.+.+++++||+..++|+|+...+++|+++|++++... +++.....+++||++++|+|..|+..|.|+++++++++
T Consensus 15 ~~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~--dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~v 92 (98)
T 2ozi_A 15 DEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp SSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeC--CCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEE
Confidence 3689999999999999999998655666677888876653 35422478999999999999999999999999999987
Q ss_pred E
Q 048761 173 F 173 (221)
Q Consensus 173 ~ 173 (221)
-
T Consensus 93 E 93 (98)
T 2ozi_A 93 E 93 (98)
T ss_dssp E
T ss_pred E
Confidence 4
No 51
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.40 E-value=1.2e-12 Score=101.25 Aligned_cols=77 Identities=23% Similarity=0.224 Sum_probs=68.7
Q ss_pred ccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 92 TLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
+..+.+.+++++||+..++|+|++..|++||++|++++.+. ++ .+.|++||++++|+|.+|++.|.+++++++++
T Consensus 54 ~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~ 128 (133)
T 1o4t_A 54 NKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDN---GK--DVPIKAGDVCFTDSGESHSIENTGNTDLEFLA 128 (133)
T ss_dssp TSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEET---TE--EEEEETTEEEEECTTCEEEEECCSSSCEEEEE
T ss_pred CceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEEC---CE--EEEeCCCcEEEECCCCcEEeEECCCCCEEEEE
Confidence 34578889999999999999997568999999999999875 45 48999999999999999999999999999987
Q ss_pred EE
Q 048761 172 SF 173 (221)
Q Consensus 172 v~ 173 (221)
+.
T Consensus 129 v~ 130 (133)
T 1o4t_A 129 VI 130 (133)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 52
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.40 E-value=2.2e-12 Score=105.38 Aligned_cols=82 Identities=13% Similarity=0.167 Sum_probs=69.2
Q ss_pred ccccceEEEEEEecCCCcCC---CccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEec-CCC
Q 048761 90 INTLGMSFVRADLRVGAINP---PHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNV-GDE 165 (221)
Q Consensus 90 l~~~g~s~~rv~l~pgg~~p---pH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~-g~~ 165 (221)
..+..+.+.+++++||+..+ +|+|+ ..|++||++|++++.+.+. +....+.|++||.++||++.+|.+.|. +++
T Consensus 112 ~~~~~~~~~~~~~~pg~~~~~~~~h~h~-~~E~~~Vl~G~~~~~~~~~-~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~ 189 (198)
T 2bnm_A 112 KRAPSLVPLVVDVLTDNPDDAKFNSGHA-GNEFLFVLEGEIHMKWGDK-ENPKEALLPTGASMFVEEHVPHAFTAAKGTG 189 (198)
T ss_dssp TTSTTCEEEEEEECCCCGGGCCCCCCCS-SCEEEEEEESCEEEEESCT-TSCEEEEECTTCEEEECTTCCEEEEESTTSC
T ss_pred CCCCcceEEEEEEcCCCCCcccccccCC-CeEEEEEEeeeEEEEECCc-CCcccEEECCCCEEEeCCCCceEEEecCCCC
Confidence 33457899999999998875 79998 5999999999999998631 111258999999999999999999999 999
Q ss_pred CEEEEEEE
Q 048761 166 PATIFGSF 173 (221)
Q Consensus 166 ~a~~l~v~ 173 (221)
++++++++
T Consensus 190 ~~~~l~v~ 197 (198)
T 2bnm_A 190 SAKLIAVN 197 (198)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEe
Confidence 99999875
No 53
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.40 E-value=2.5e-12 Score=103.99 Aligned_cols=78 Identities=12% Similarity=0.069 Sum_probs=71.1
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
.++.+.+++++||+..++|+|+ ..|++||++|++++.+. ++ .+.+++||++++|+|..|.+.|.++++++++++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~~v~---g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i 124 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQ-HAHGVMILKGRGHAMVG---RA--VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCM 124 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEECCTTSCEEEEEE
T ss_pred CeEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 4688999999999999999998 58999999999999875 55 499999999999999999999999999999999
Q ss_pred EcCC
Q 048761 173 FNSQ 176 (221)
Q Consensus 173 ~ss~ 176 (221)
+...
T Consensus 125 ~~~~ 128 (166)
T 3jzv_A 125 VNAE 128 (166)
T ss_dssp EESS
T ss_pred EccC
Confidence 8854
No 54
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.40 E-value=1.5e-12 Score=104.12 Aligned_cols=79 Identities=11% Similarity=0.094 Sum_probs=71.9
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
..+.+.+++++||+..++|+|+ ..|++||++|++++.+. ++ .+.|++||++++|+|..|.+.|.++++++++++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~v~v~---g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i 115 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHA-HVHAVMIHRGHGQCLVG---ET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCV 115 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 4688999999999999999998 68999999999999875 55 499999999999999999999999999999999
Q ss_pred EcCCC
Q 048761 173 FNSQN 177 (221)
Q Consensus 173 ~ss~~ 177 (221)
++...
T Consensus 116 ~~~~~ 120 (156)
T 3kgz_A 116 VNAAR 120 (156)
T ss_dssp EESSC
T ss_pred EeCCC
Confidence 98654
No 55
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.39 E-value=2.3e-12 Score=96.83 Aligned_cols=75 Identities=13% Similarity=0.193 Sum_probs=66.8
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEE-EecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFAR-VIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~-~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
++.+.++.++||...++|+|+ ..|++||++|++++.+. ++. + .|++||++++|+|..|.+.|.+++++.++.+
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~---~~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i 99 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSN-SYVHLIIIKGEMTLTLE---DQE--PHNYKEGNIVYVPFNVKMLIQNINSDILEFFVV 99 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECS-SCEEEEEEESEEEEEET---TSC--CEEEETTCEEEECTTCEEEEECCSSSEEEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCC-CcEEEEEEeCEEEEEEC---CEE--EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 567888999999999999997 79999999999999875 443 6 9999999999999999999999999988877
Q ss_pred Ec
Q 048761 173 FN 174 (221)
Q Consensus 173 ~s 174 (221)
..
T Consensus 100 ~~ 101 (117)
T 2b8m_A 100 KA 101 (117)
T ss_dssp EC
T ss_pred EC
Confidence 44
No 56
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.36 E-value=3.6e-12 Score=95.18 Aligned_cols=76 Identities=18% Similarity=0.280 Sum_probs=67.0
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSF 173 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ 173 (221)
++.+.+++++||...++|+|+ ..|++||++|++++.+. ++ .+.|++||++++|+|..|.+.|.+ +++++.++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v~ 104 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNVD---GV--IKVLTAGDSFFVPPHVDHGAVCPT--GGILIDTF 104 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEEESS--CEEEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEEC---CE--EEEeCCCCEEEECcCCceeeEeCC--CcEEEEEE
Confidence 478999999999999999998 79999999999999874 45 489999999999999999999987 67888888
Q ss_pred cCCC
Q 048761 174 NSQN 177 (221)
Q Consensus 174 ss~~ 177 (221)
....
T Consensus 105 ~p~~ 108 (116)
T 2pfw_A 105 SPAR 108 (116)
T ss_dssp ESCC
T ss_pred CCch
Confidence 7543
No 57
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.35 E-value=2.2e-12 Score=98.73 Aligned_cols=78 Identities=13% Similarity=0.115 Sum_probs=70.0
Q ss_pred ccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 92 TLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
..++.+.+++++||+..++|+|+ ..|++||++|++++.+. ++ .+.+++||++++|+|..|.+.|.+++++.+++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~ 118 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLKE---QG--EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLC 118 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 44789999999999999999998 79999999999998875 45 38999999999999999999999999999988
Q ss_pred EEcC
Q 048761 172 SFNS 175 (221)
Q Consensus 172 v~ss 175 (221)
++..
T Consensus 119 v~~~ 122 (126)
T 1vj2_A 119 LIPK 122 (126)
T ss_dssp EEEG
T ss_pred EEcc
Confidence 7764
No 58
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.34 E-value=1.1e-11 Score=97.59 Aligned_cols=79 Identities=23% Similarity=0.329 Sum_probs=70.2
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
.++.+.+++++||...++|+|+. .|++||++|++++.+. ++. .+.|++||++++|+|.+|++.|.++++++++++
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~---~~~-~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v 120 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQER---GKP-ARILKKGDVVEIPPNVVHWHGAAPDEELVHIGI 120 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEET---TSC-CEEEETTCEEEECTTCCEEEEEBTTBCEEEEEE
T ss_pred CcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEEC---CEE-EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 46899999999999999999984 9999999999999875 441 278999999999999999999999999999988
Q ss_pred EcCC
Q 048761 173 FNSQ 176 (221)
Q Consensus 173 ~ss~ 176 (221)
....
T Consensus 121 ~~~~ 124 (147)
T 2f4p_A 121 STQV 124 (147)
T ss_dssp ECCG
T ss_pred EccC
Confidence 8753
No 59
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.34 E-value=9.4e-12 Score=94.58 Aligned_cols=76 Identities=16% Similarity=0.187 Sum_probs=67.9
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
..+.+.+.+++||...++|+|. ..|++||++|++++.+. ++ .+.+++||++++|+|.+|.+.|.+++++.++++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~-~~Ei~~v~~G~~~~~i~---~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i 105 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHN-EYELFIVIQGNAIIRIN---DE--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI 105 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCS-SEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred CCcEEEEEEECCCCccCCEecC-CeEEEEEEeCEEEEEEC---CE--EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 3588889999999999999996 79999999999999885 55 489999999999999999999999998888776
Q ss_pred Ec
Q 048761 173 FN 174 (221)
Q Consensus 173 ~s 174 (221)
+-
T Consensus 106 ~f 107 (128)
T 4i4a_A 106 WW 107 (128)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 60
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.33 E-value=5.1e-12 Score=96.08 Aligned_cols=80 Identities=16% Similarity=0.143 Sum_probs=67.3
Q ss_pred ccceEEEEEEecCCCcCC-CccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEE
Q 048761 92 TLGMSFVRADLRVGAINP-PHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIF 170 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~p-pH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 170 (221)
..++.+.++.++||...+ +|+|+...+++||++|++++.+. ++ .+.+++||++++|+|.+|.+.|.+++++.++
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~ 97 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITID---GE--KIELQAGDWLRIAPDGKRQISAASDSPIGFL 97 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEET---TE--EEEEETTEEEEECTTCCEEEEEBTTBCEEEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEEEcCCCCCEEEE
Confidence 446788889999999988 89998533455599999999875 45 4899999999999999999999999999988
Q ss_pred EEEcCC
Q 048761 171 GSFNSQ 176 (221)
Q Consensus 171 ~v~ss~ 176 (221)
++....
T Consensus 98 ~i~~~~ 103 (125)
T 3cew_A 98 CIQVKA 103 (125)
T ss_dssp EEEEET
T ss_pred EEEcCC
Confidence 877643
No 61
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.32 E-value=5.7e-12 Score=102.08 Aligned_cols=76 Identities=16% Similarity=-0.004 Sum_probs=66.1
Q ss_pred ceEEEEEEecC-CCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 94 GMSFVRADLRV-GAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 94 g~s~~rv~l~p-gg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
-+...+++++| |+...+|.|..+.|++||++|++++.+. ++ .+.|++||.++||+|..|.+.|.++++++++.+
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~---g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVC---KN--KFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEEC---CE--EEEEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 46788899999 7776665555689999999999999986 45 489999999999999999999999999999987
Q ss_pred Ec
Q 048761 173 FN 174 (221)
Q Consensus 173 ~s 174 (221)
..
T Consensus 162 q~ 163 (166)
T 2vpv_A 162 QV 163 (166)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 62
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.32 E-value=1.1e-11 Score=92.46 Aligned_cols=74 Identities=15% Similarity=0.200 Sum_probs=64.2
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
.++.+.++.++||...++|+|+ ..|++||++|++++.+. ++ .+.+++||++++|+|..|.+.|.+ ++.++++
T Consensus 38 ~~~~~~~~~~~~g~~~~~H~H~-~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~~~v 109 (115)
T 1yhf_A 38 QDLGITVFSLDKGQEIGRHSSP-GDAMVTILSGLAEITID---QE--TYRVAEGQTIVMPAGIPHALYAVE--AFQMLLV 109 (115)
T ss_dssp TTEEEEEEEECTTCEEEEECCS-SEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTSCEEEEESS--CEEEEEE
T ss_pred CceEEEEEEECCCCccCCEECC-CcEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEECC--CceEEEE
Confidence 3678999999999999999998 69999999999999874 45 489999999999999999999987 4666665
Q ss_pred Ec
Q 048761 173 FN 174 (221)
Q Consensus 173 ~s 174 (221)
+-
T Consensus 110 ~~ 111 (115)
T 1yhf_A 110 VV 111 (115)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 63
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.32 E-value=7.5e-12 Score=96.11 Aligned_cols=77 Identities=21% Similarity=0.258 Sum_probs=59.9
Q ss_pred eEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEc
Q 048761 95 MSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFN 174 (221)
Q Consensus 95 ~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~s 174 (221)
+.+.+++++||+..++|+|+...|++||++|++++.+.+ ++ .+.|++||++++|+|..|.+.|.+++ +++++++.
T Consensus 43 ~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~~~ 117 (134)
T 2o8q_A 43 AHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYED--IG--AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEIVS 117 (134)
T ss_dssp EEEEEECC-----CCCEEECCSCEEEEEEESEEEEEETT--TE--EEEEETTCEEECCTTCCEEEEEECTT-CEEEEEES
T ss_pred EEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECC--cE--EEEecCCCEEEECCCCcEEeEeCCCC-eEEEEEEC
Confidence 456777777898899999986699999999999998852 14 49999999999999999999998774 67777776
Q ss_pred CC
Q 048761 175 SQ 176 (221)
Q Consensus 175 s~ 176 (221)
..
T Consensus 118 p~ 119 (134)
T 2o8q_A 118 PA 119 (134)
T ss_dssp ST
T ss_pred CC
Confidence 43
No 64
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.30 E-value=9e-12 Score=101.51 Aligned_cols=78 Identities=18% Similarity=0.127 Sum_probs=67.0
Q ss_pred cccceEEEEEEecCCCcCC--CccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEE
Q 048761 91 NTLGMSFVRADLRVGAINP--PHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPAT 168 (221)
Q Consensus 91 ~~~g~s~~rv~l~pgg~~p--pH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 168 (221)
.+..+.+.+++++||+..+ +|+|+ ..|++||++|++++.+. ++ .+.|++||+++||+|.+|.+.|.+++++
T Consensus 100 ~~~~~~~~~~~~~pg~~~~~~~H~h~-~~E~~~Vl~G~~~~~~~---~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~- 172 (192)
T 1y9q_A 100 ADTGLEIFEITLLDHHQQMSSPHALG-VIEYIHVLEGIMKVFFD---EQ--WHELQQGEHIRFFSDQPHGYAAVTEKAV- 172 (192)
T ss_dssp TTTTEEEEEEEECTTCEEEECCCSTT-CEEEEEEEESCEEEEET---TE--EEEECTTCEEEEECSSSEEEEESSSCEE-
T ss_pred CCCcEEEEEEEECCCCCccCCCCCCC-CEEEEEEEEeEEEEEEC---CE--EEEeCCCCEEEEcCCCCeEeECCCCCcE-
Confidence 3446889999999998765 78776 68999999999999875 55 4899999999999999999999999999
Q ss_pred EEEEEcC
Q 048761 169 IFGSFNS 175 (221)
Q Consensus 169 ~l~v~ss 175 (221)
+++++..
T Consensus 173 ~l~v~~~ 179 (192)
T 1y9q_A 173 FQNIVAY 179 (192)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 7777653
No 65
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.29 E-value=7.6e-12 Score=107.23 Aligned_cols=78 Identities=15% Similarity=0.104 Sum_probs=67.3
Q ss_pred ccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCC-CCEEEE
Q 048761 92 TLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGD-EPATIF 170 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~-~~a~~l 170 (221)
...+.+.+++++||+..++|+|+...|++||++|++++.+. ++ .+.|++||+++||+|.+|++.|.|+ ++++++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~---~~--~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l 250 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLD---NN--WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYI 250 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESS---SC--EEEEETTCEEEECSSEEEEEEEC----CEEEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCcCEEEE
Confidence 34688999999999999999998779999999999999875 55 4899999999999999999999999 999998
Q ss_pred EEEc
Q 048761 171 GSFN 174 (221)
Q Consensus 171 ~v~s 174 (221)
...+
T Consensus 251 ~~~d 254 (261)
T 1rc6_A 251 YSKD 254 (261)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7765
No 66
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.28 E-value=1.4e-11 Score=104.66 Aligned_cols=78 Identities=15% Similarity=0.118 Sum_probs=69.4
Q ss_pred ceEEEEEEecC-CCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 94 GMSFVRADLRV-GAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 94 g~s~~rv~l~p-gg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
-+.+..++++| |+..++|+|+ ..|++||++|++++.+. ++ .+.|++||.+++|+|.+|.+.|.|+++++++.+
T Consensus 144 ~~~~~~~~~~p~g~~~~~H~H~-~~e~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v 217 (243)
T 3h7j_A 144 WVEIMLAKIPGNGGEMPFHKHR-NEQIGICIGGGYDMTVE---GC--TVEMKFGTAYFCEPREDHGAINRSEKESKSINI 217 (243)
T ss_dssp TEEEEEEEECTTTEEEEEECCS-SEEEEEECSSCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred eeEEEEEEECCCCCcCCCEeCC-CcEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 46777889999 8888999998 58999999999999875 45 488999999999999999999999999999999
Q ss_pred EcCCC
Q 048761 173 FNSQN 177 (221)
Q Consensus 173 ~ss~~ 177 (221)
++...
T Consensus 218 ~~p~~ 222 (243)
T 3h7j_A 218 FFPPR 222 (243)
T ss_dssp EESCS
T ss_pred EcCCh
Confidence 98543
No 67
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.25 E-value=3.2e-11 Score=88.70 Aligned_cols=76 Identities=20% Similarity=0.155 Sum_probs=63.5
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEE-EEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEI-AYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~-~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
.++.+.+++++||...++|+|+...|+ +||++|++++.+.+ ++ .+.|++||++++|+|..|.+.|.++ +.++.
T Consensus 31 ~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~ 104 (110)
T 2q30_A 31 ENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDG--DA--VIPAPRGAVLVAPISTPHGVRAVTD--MKVLV 104 (110)
T ss_dssp SSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGG--GC--EEEECTTEEEEEETTSCEEEEESSS--EEEEE
T ss_pred CCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCC--CE--EEEECCCCEEEeCCCCcEEEEEcCC--cEEEE
Confidence 467889999999999999999854688 89999999988741 24 4899999999999999999999865 55666
Q ss_pred EEc
Q 048761 172 SFN 174 (221)
Q Consensus 172 v~s 174 (221)
+++
T Consensus 105 ~~~ 107 (110)
T 2q30_A 105 TIA 107 (110)
T ss_dssp EEE
T ss_pred EEC
Confidence 665
No 68
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.24 E-value=4.3e-11 Score=89.34 Aligned_cols=73 Identities=10% Similarity=0.045 Sum_probs=62.2
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSF 173 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ 173 (221)
.+.+..+.++||...++|+|+ ..|++||++|++++.+. ++ .+.|++||++++|+|.+|.+.|. ++++++.+.
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~-~~e~~~vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~~i~ 108 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYF-GDTLYLILQGEAVITFD---DQ--KIDLVPEDVLMVPAHKIHAIAGK--GRFKMLQIT 108 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCS-SCEEEEEEEEEEEEEET---TE--EEEECTTCEEEECTTCCBEEEEE--EEEEEEEEE
T ss_pred CceEEEEEECCCCccccEECC-CCeEEEEEeCEEEEEEC---CE--EEEecCCCEEEECCCCcEEEEeC--CCcEEEEEE
Confidence 456777889999999999998 69999999999999885 45 48999999999999999999996 466666655
Q ss_pred c
Q 048761 174 N 174 (221)
Q Consensus 174 s 174 (221)
.
T Consensus 109 ~ 109 (114)
T 2ozj_A 109 L 109 (114)
T ss_dssp E
T ss_pred E
Confidence 4
No 69
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.23 E-value=8.6e-11 Score=101.49 Aligned_cols=76 Identities=17% Similarity=0.201 Sum_probs=68.4
Q ss_pred cceEEEEEEecCCCcCCC-ccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCC-CCEEEE
Q 048761 93 LGMSFVRADLRVGAINPP-HFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGD-EPATIF 170 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~pp-H~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~-~~a~~l 170 (221)
..+.+.+++++||+..+. |+|+ ..|++||++|++++.+. ++ .+.|++||+++||++.+|++.|.++ ++++++
T Consensus 180 ~~~~~~~~~l~pg~~~~~~H~H~-~~E~~yVl~G~~~~~i~---~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l 253 (274)
T 1sef_A 180 FDMNMHILSFEPGASHAYIETHV-QEHGAYLISGQGMYNLD---NE--WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYV 253 (274)
T ss_dssp CSEEEEEEEECTTCBCSSCBCCS-CCEEEEEEECEEEEEET---TE--EEEEETTCEEEECTTCCEEEEEECSSSCEEEE
T ss_pred CCEEEEEEEECCCCccCcceecc-CeEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeCCCCCCEEEE
Confidence 468899999999999888 9997 68999999999999885 55 4999999999999999999999999 999988
Q ss_pred EEEc
Q 048761 171 GSFN 174 (221)
Q Consensus 171 ~v~s 174 (221)
...+
T Consensus 254 ~~~~ 257 (274)
T 1sef_A 254 YSKD 257 (274)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7754
No 70
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.20 E-value=6.9e-11 Score=103.61 Aligned_cols=78 Identities=15% Similarity=0.100 Sum_probs=69.3
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
..+++.++++.||+..++|+|++..|++||++|++++.+. ++ .+.|++||++++|+|.+|.+.|.++ +++++.+
T Consensus 44 ~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~---~~--~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~~ 117 (337)
T 1y3t_A 44 DLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLD---GE--RYLLISGDYANIPAGTPHSYRMQSH-RTRLVSY 117 (337)
T ss_dssp SSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECST-TEEEEEE
T ss_pred CeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEECCC-CeEEEEE
Confidence 3688999999999999999998789999999999999874 55 4899999999999999999999987 6888888
Q ss_pred EcCC
Q 048761 173 FNSQ 176 (221)
Q Consensus 173 ~ss~ 176 (221)
++..
T Consensus 118 ~~p~ 121 (337)
T 1y3t_A 118 TMKG 121 (337)
T ss_dssp EETT
T ss_pred ECCC
Confidence 7643
No 71
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.18 E-value=2.2e-10 Score=97.56 Aligned_cols=77 Identities=9% Similarity=0.069 Sum_probs=68.8
Q ss_pred ccceEEEEEEecCCCcCCC-ccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEE
Q 048761 92 TLGMSFVRADLRVGAINPP-HFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIF 170 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~pp-H~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 170 (221)
+..+.+.+++++||+..+. |.|. .+|.+||++|++++.+. ++ .+.|++||+++++++.+|+++|.|+++++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h~-~ee~~~vLeG~~~~~~~---~~--~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl 235 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVHY-MEHGLLMLEGEGLYKLE---EN--YYPVTAGDIIWMGAHCPQWYGALGRNWSKYL 235 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCS-SCEEEEEEECEEEEEET---TE--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred CCCeEEEEEEECCCCccCcccCCC-ceEEEEEEECEEEEEEC---CE--EEEcCCCCEEEECCCCCEEEEcCCCCCEEEE
Confidence 4579999999999999986 5565 78999999999999875 56 4899999999999999999999999999999
Q ss_pred EEEc
Q 048761 171 GSFN 174 (221)
Q Consensus 171 ~v~s 174 (221)
..-+
T Consensus 236 ~~kd 239 (246)
T 1sfn_A 236 LYKD 239 (246)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8766
No 72
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.17 E-value=1.9e-10 Score=102.94 Aligned_cols=80 Identities=18% Similarity=0.199 Sum_probs=65.2
Q ss_pred ceEEEEEEecCCCc-CC--CccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEE
Q 048761 94 GMSFVRADLRVGAI-NP--PHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIF 170 (221)
Q Consensus 94 g~s~~rv~l~pgg~-~p--pH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 170 (221)
.+++. ..+.|++. .+ +|+|++..|++||++|++++.+.+.+|+...+.|++||+++||+|.+|++.|.++++ +++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l 124 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMT 124 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEE
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEE
Confidence 46666 45566654 45 899987899999999999999986444434699999999999999999999998876 788
Q ss_pred EEEcC
Q 048761 171 GSFNS 175 (221)
Q Consensus 171 ~v~ss 175 (221)
.++..
T Consensus 125 ~v~~p 129 (350)
T 1juh_A 125 GVIVP 129 (350)
T ss_dssp EEEES
T ss_pred EEEcC
Confidence 77764
No 73
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.17 E-value=8.2e-11 Score=102.21 Aligned_cols=76 Identities=14% Similarity=0.123 Sum_probs=67.9
Q ss_pred cceEEEEEEecCCCcC--CCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEE
Q 048761 93 LGMSFVRADLRVGAIN--PPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIF 170 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~--ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 170 (221)
..+.+.+++++||+.. +.|.|. ..|++||++|++++.+. ++ .+.|++||.++||+|..|.++|.++++++++
T Consensus 66 ~~~~~~~~~l~PG~~~~~~~h~H~-~eE~~~Vl~G~l~v~v~---g~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l 139 (278)
T 1sq4_A 66 ETFSQYIVELAPNGGSDKPEQDPN-AEAVLFVVEGELSLTLQ---GQ--VHAMQPGGYAFIPPGADYKVRNTTGQHTRFH 139 (278)
T ss_dssp CSCEEEEEEEEEEEEESSCCCCTT-EEEEEEEEESCEEEEES---SC--EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCCCCcCCC-ceEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 4689999999999876 567786 79999999999999986 45 4899999999999999999999999999999
Q ss_pred EEEc
Q 048761 171 GSFN 174 (221)
Q Consensus 171 ~v~s 174 (221)
++..
T Consensus 140 ~v~~ 143 (278)
T 1sq4_A 140 WIRK 143 (278)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8875
No 74
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.16 E-value=1e-10 Score=101.33 Aligned_cols=108 Identities=16% Similarity=0.104 Sum_probs=83.3
Q ss_pred CCCCCCCCCCeEEecCCCCCCcCCCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEE
Q 048761 51 KNSSEATTDDFVFSGLKSAGNFSDTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSG 130 (221)
Q Consensus 51 k~~~~vt~~df~~~~l~~~~~~~~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~ 130 (221)
++.+.++.+|++.+.| |+ -.+..++.+-... + +..+.+.+++++||+..+.|.|. .+|++||++|++++.
T Consensus 35 ~~~avI~~~~iv~s~l--Pg---~~~~~~~vL~sP~---~-G~~f~~~lv~l~PGg~s~~~~h~-~EEfiyVleG~l~l~ 104 (266)
T 4e2q_A 35 RDHALITPESHVYSPL--PD---WTNTLGAYLITPA---T-GSHFVMYLAKMKEMSSSGLPPQD-IERLIFVVEGAVTLT 104 (266)
T ss_dssp SSEEEECGGGCCCEEC--TT---SSSEEEEEEECGG---G-TCSSEEEEEEECSSEECCCCCTT-EEEEEEEEEECEEEE
T ss_pred cCeEEECccceEEeeC--CC---CcCEEEEEEcCCC---C-CCcEEEEEEEECcCCcCCCCCCC-CeEEEEEEEEEEEEE
Confidence 3457778888888755 32 3455555554332 3 24688999999999998888775 899999999999999
Q ss_pred EEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEc
Q 048761 131 FVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFN 174 (221)
Q Consensus 131 ~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~s 174 (221)
+.+ ++ .+.|++||.++||++..|++.|. ++++++++..
T Consensus 105 l~~--g~--~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V~k 142 (266)
T 4e2q_A 105 NTS--SS--SKKLTVDSYAYLPPNFHHSLDCV--ESATLVVFER 142 (266)
T ss_dssp C----CC--CEEECTTEEEEECTTCCCEEEES--SCEEEEEEEE
T ss_pred ECC--Cc--EEEEcCCCEEEECCCCCEEEEeC--CCEEEEEEEe
Confidence 852 34 38999999999999999999995 6898888854
No 75
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.16 E-value=8e-11 Score=89.97 Aligned_cols=73 Identities=12% Similarity=0.085 Sum_probs=62.6
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSF 173 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ 173 (221)
.+++..++++||...++|. ..+|++||++|++++.+. ++ .+.|++||+++||+|..|.+.|.+ ++++++.+.
T Consensus 39 ~~~~~~~~~~pG~~~~~H~--~~~E~~~Vl~G~~~~~~~---g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~v~ 110 (119)
T 3lwc_A 39 PITIGYGRYAPGQSLTETM--AVDDVMIVLEGRLSVSTD---GE--TVTAGPGEIVYMPKGETVTIRSHE-EGALTAYVT 110 (119)
T ss_dssp CCEEEEEEECTTCEEEEEC--SSEEEEEEEEEEEEEEET---TE--EEEECTTCEEEECTTCEEEEEEEE-EEEEEEEEE
T ss_pred CEEEEEEEECCCCCcCccC--CCCEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCEEEEEcCC-CCeEEEEEE
Confidence 5788899999998776664 579999999999999883 55 489999999999999999998875 678888777
Q ss_pred c
Q 048761 174 N 174 (221)
Q Consensus 174 s 174 (221)
.
T Consensus 111 ~ 111 (119)
T 3lwc_A 111 Y 111 (119)
T ss_dssp E
T ss_pred C
Confidence 6
No 76
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.16 E-value=8.3e-11 Score=99.82 Aligned_cols=74 Identities=18% Similarity=0.119 Sum_probs=66.0
Q ss_pred eEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEE-EcCCCeEEEEecCCCCEEEEEEE
Q 048761 95 MSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMV-FPRGLMHFQMNVGDEPATIFGSF 173 (221)
Q Consensus 95 ~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~-~P~G~~H~~~N~g~~~a~~l~v~ 173 (221)
..+.+.+++||...++|+|+ ..|++||++|++++.+. ++ .+.|++||.++ +|+|..|.+.|.++++++++.+.
T Consensus 34 ~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~~~---~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i~ 107 (243)
T 3h7j_A 34 TEVLMSYVPPHTNVEPHQHK-EVQIGMVVSGELMMTVG---DV--TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDIK 107 (243)
T ss_dssp EEEEEEEECTTEEEEEECCS-SEEEEEEEESEEEEEET---TE--EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred CEEEEEEECCCCccCCEECC-CcEEEEEEEeEEEEEEC---CE--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEEe
Confidence 46777789999999999998 79999999999999874 55 48999999985 99999999999999999998876
Q ss_pred c
Q 048761 174 N 174 (221)
Q Consensus 174 s 174 (221)
.
T Consensus 108 r 108 (243)
T 3h7j_A 108 R 108 (243)
T ss_dssp E
T ss_pred c
Confidence 4
No 77
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.16 E-value=1.3e-10 Score=104.33 Aligned_cols=77 Identities=21% Similarity=0.330 Sum_probs=68.4
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
..+.+....++||+..++|+|+ ..|++||++|++++..++ ++ .+.+++||++++|+|..|.+.|.++++++++.+
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~-~~e~~yVl~G~g~~t~v~--g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v 172 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHN-QSALRFIVEGKGAFTAVD--GE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDG 172 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEEEEECSSCEEEET--TE--EEECCTTCEEEECTTSCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCCcCCeecC-cceEEEEEEEEEEEEEEC--CE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 3678999999999999999997 689999999999884442 45 489999999999999999999999999999888
Q ss_pred Ec
Q 048761 173 FN 174 (221)
Q Consensus 173 ~s 174 (221)
.+
T Consensus 173 ~d 174 (354)
T 2d40_A 173 LD 174 (354)
T ss_dssp EC
T ss_pred EC
Confidence 65
No 78
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.14 E-value=3.3e-10 Score=85.27 Aligned_cols=78 Identities=21% Similarity=0.214 Sum_probs=60.1
Q ss_pred ccceEEEEEEecCCCcCCC---ccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCC-CE
Q 048761 92 TLGMSFVRADLRVGAINPP---HFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDE-PA 167 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~pp---H~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~-~a 167 (221)
+.++.+.++. .+|...++ |.| ...|++||++|++++.+. ++...+.|++||.++||+|..|.+.|.+++ ++
T Consensus 28 ~~~~~i~~i~-~~g~~~~~~~~~~~-~~~E~~~Vl~G~~~l~~~---~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~ 102 (112)
T 2opk_A 28 RKGLKIERII-SNGQASPPGFWYDS-PQDEWVMVVSGSAGIECE---GDTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPT 102 (112)
T ss_dssp ETTEEEEEEE-ESSCCCCTTCCBCC-SSEEEEEEEESCEEEEET---TCSSCEEECTTEEEEECTTCCEEEEEECSSSCE
T ss_pred CCCEEEEEEE-eCCccCCCCccccC-CccEEEEEEeCeEEEEEC---CEEEEEEECCCCEEEECCCCcEEEEeCCCCCCE
Confidence 3467777775 55655554 445 479999999999999986 331127899999999999999999999876 67
Q ss_pred EEEEEEc
Q 048761 168 TIFGSFN 174 (221)
Q Consensus 168 ~~l~v~s 174 (221)
++++++.
T Consensus 103 ~~l~v~~ 109 (112)
T 2opk_A 103 VWLAVHC 109 (112)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6777765
No 79
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.14 E-value=1.2e-10 Score=85.98 Aligned_cols=68 Identities=18% Similarity=0.268 Sum_probs=54.2
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-ceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS-RVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~-k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
..++.+.||. .++|+|+...|++||++|++++.+. + + .+.|++||++++|+|..|.+.|. +++.++.+
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i 98 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFA---DGG--SMTIREGEMAVVPKSVSHRPRSE--NGCSLVLI 98 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEET---TSC--EEEECTTEEEEECTTCCEEEEEE--EEEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEEC---CCc--EEEECCCCEEEECCCCcEeeEeC--CCeEEEEE
Confidence 4556777876 5699998559999999999999875 4 5 48999999999999999999995 45666644
No 80
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.14 E-value=1.3e-10 Score=99.47 Aligned_cols=77 Identities=17% Similarity=0.193 Sum_probs=67.0
Q ss_pred cceEEEEEEecCCCcCCCccC-CCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFH-PRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~H-p~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
..+.+.+++++||+....|.| +..+|++||++|++++.+. ++ .+.|++||.++||++.+|.+.|.+++++++++
T Consensus 57 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~---~~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~ 131 (261)
T 1rc6_A 57 ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAE---GK--TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFL 131 (261)
T ss_dssp CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEET---TE--EEEEETTEEEEECTTCCCEEEECSSSCEEEEE
T ss_pred CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 467889999999988765544 4568899999999999985 55 49999999999999999999999999999999
Q ss_pred EEc
Q 048761 172 SFN 174 (221)
Q Consensus 172 v~s 174 (221)
+..
T Consensus 132 v~~ 134 (261)
T 1rc6_A 132 YKR 134 (261)
T ss_dssp EEE
T ss_pred EEe
Confidence 885
No 81
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.11 E-value=1.5e-10 Score=90.16 Aligned_cols=72 Identities=15% Similarity=0.086 Sum_probs=60.8
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSF 173 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ 173 (221)
.+++.+++++|| ..|||...+|++||++|++++.+. ++ .+.|++||+++||+|..|.+.| ++++++++++
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~~---g~--~~~l~~GD~i~~p~g~~h~~~~--~~~~~~l~v~ 125 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRHE---GE--TMIAKAGDVMFIPKGSSIEFGT--PTSVRFLYVA 125 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCEEEEEE--EEEEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEEC---CE--EEEECCCcEEEECCCCEEEEEe--CCCEEEEEEE
Confidence 578889999999 356665689999999999999875 55 4899999999999999999987 4578888887
Q ss_pred cC
Q 048761 174 NS 175 (221)
Q Consensus 174 ss 175 (221)
..
T Consensus 126 ~p 127 (133)
T 2pyt_A 126 WP 127 (133)
T ss_dssp ES
T ss_pred cC
Confidence 63
No 82
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.11 E-value=2.6e-10 Score=95.66 Aligned_cols=78 Identities=15% Similarity=0.127 Sum_probs=69.5
Q ss_pred ccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 92 TLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
...+.+..+.++||...|.|.|+ .+|+.||++|++++.+.+ ++ .+.+++||++++|+|..|.++ .+++|+.++.
T Consensus 129 s~~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v~~--g~--~~~l~pGd~v~ipsgv~Ha~r-t~dePllalw 202 (217)
T 4b29_A 129 TQSLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHLRN--AP--DLMLEPGQTRFHPANAPHAMT-TLTDPILTLV 202 (217)
T ss_dssp CSSCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEETT--SC--CEEECTTCEEEECTTCCEEEE-CCSSCEEEEE
T ss_pred CCeEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEECC--CC--EEecCCCCEEEcCCCCceeEE-ECCccEEEEE
Confidence 34789999999999999999998 799999999999998862 44 389999999999999999998 5889999888
Q ss_pred EEcC
Q 048761 172 SFNS 175 (221)
Q Consensus 172 v~ss 175 (221)
+...
T Consensus 203 vW~G 206 (217)
T 4b29_A 203 LWRG 206 (217)
T ss_dssp EEES
T ss_pred EEeC
Confidence 8874
No 83
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.11 E-value=4.6e-10 Score=98.35 Aligned_cols=74 Identities=16% Similarity=0.185 Sum_probs=63.2
Q ss_pred EEEEEecC-CCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcC
Q 048761 97 FVRADLRV-GAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNS 175 (221)
Q Consensus 97 ~~rv~l~p-gg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss 175 (221)
...+.+.| |...++|+|+...|++||++|++++.+. ++ .+.|++||++++|++..|++.|.++ +++++.+++.
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i~---~~--~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~ 292 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWTD---GQ--EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVP 292 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEES
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcC
Confidence 44556666 5667899998679999999999999885 45 4999999999999999999999998 8999998864
Q ss_pred C
Q 048761 176 Q 176 (221)
Q Consensus 176 ~ 176 (221)
.
T Consensus 293 ~ 293 (337)
T 1y3t_A 293 G 293 (337)
T ss_dssp S
T ss_pred c
Confidence 3
No 84
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.10 E-value=2.2e-10 Score=98.86 Aligned_cols=77 Identities=12% Similarity=0.144 Sum_probs=66.6
Q ss_pred cceEEEEEEecCCCcCCCcc-CCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHF-HPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~-Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
..+.+.+++++||+....|. |+..+|++||++|++++.+. ++ .+.|++||.++||++.+|.+.|.+++++++++
T Consensus 60 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~---~~--~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~ 134 (274)
T 1sef_A 60 ATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDG---QE--THELEAGGYAYFTPEMKMYLANAQEADTEVFL 134 (274)
T ss_dssp CSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTSCCEEEESSSSCEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 46789999999998765544 44568999999999999885 55 48999999999999999999999999999998
Q ss_pred EEc
Q 048761 172 SFN 174 (221)
Q Consensus 172 v~s 174 (221)
+..
T Consensus 135 v~~ 137 (274)
T 1sef_A 135 YKK 137 (274)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 85
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.08 E-value=3e-10 Score=95.45 Aligned_cols=73 Identities=18% Similarity=0.230 Sum_probs=63.3
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSF 173 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ 173 (221)
.+++.+++++||...++|+|+ ..|++||++|++++.+. ++ .+.+++||.+++|+|.+|++.|. .+++.++.++
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~---g~--~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~~ 224 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAP-GDALVTVLDGEGKYYVD---GK--PFIVKKGESAVLPANIPHAVEAE-TENFKMLLIL 224 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEEEEEEEEET---TE--EEEEETTEEEEECTTSCEEEECC-SSCEEEEEEE
T ss_pred CeEEEEEEECCCCccCCEECC-CcEEEEEEeEEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEeC-CCCEEEEEEE
Confidence 578999999999999999998 68999999999999875 45 49999999999999999999993 4566666554
No 86
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.07 E-value=6.1e-10 Score=93.61 Aligned_cols=74 Identities=7% Similarity=-0.056 Sum_probs=65.8
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSF 173 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ 173 (221)
+..+.++.++||...++|.|+ .+|++||++|++++.+. ++ .+.|++||++++|+|.+|.+.|. ++++++.++
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~-~~~~~~Vl~G~~~~~i~---~~--~~~l~~Gd~~~~p~~~~H~~~a~--~~~~~l~i~ 107 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAML-GNRYYYCFNGNGEIFIE---NN--KKTISNGDFLEITANHNYSIEAR--DNLKLIEIG 107 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCS-SCEEEEEEESEEEEEES---SC--EEEEETTEEEEECSSCCEEEEES--SSEEEEEEE
T ss_pred CcEEEEEEECCCCccCccccC-CCEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEEC--CCcEEEEEE
Confidence 578999999999999999998 69999999999999986 45 38999999999999999999986 468888775
Q ss_pred cC
Q 048761 174 NS 175 (221)
Q Consensus 174 ss 175 (221)
..
T Consensus 108 ~~ 109 (227)
T 3rns_A 108 EK 109 (227)
T ss_dssp EC
T ss_pred ee
Confidence 53
No 87
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.07 E-value=4.7e-10 Score=81.26 Aligned_cols=59 Identities=24% Similarity=0.341 Sum_probs=49.5
Q ss_pred CcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 106 AINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 106 g~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
+..++|+|+...|++||++|++++.+. ++ .+.+++||++++|+|..|.+.|.+ ++.++.
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~ 98 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAFR---DQ--NITLQAGEMYVIPKGVEHKPMAKE--ECKIMI 98 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTCCBEEEEEE--EEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEEC---CE--EEEEcCCCEEEECCCCeEeeEcCC--CCEEEE
Confidence 458999998659999999999998875 45 489999999999999999999974 454443
No 88
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.06 E-value=8.3e-10 Score=100.43 Aligned_cols=78 Identities=14% Similarity=0.159 Sum_probs=69.7
Q ss_pred ccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEe-cCCCCEEEE
Q 048761 92 TLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMN-VGDEPATIF 170 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N-~g~~~a~~l 170 (221)
+..+.+....++||...++|.|. .+|+.||++|++.+..++ |+ ...+++||++++|+|..|...| .|+++++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~-~~ev~~IleG~G~~t~v~--G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l 194 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHA-ASALRFIMEGSGAYTIVD--GH--KVELGANDFVLTPNGTWHEHGILESGTECIWQ 194 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEES-SCEEEEEEECSCEEEEET--TE--EEEECTTCEEEECTTCCEEEEECTTCCCEEEE
T ss_pred CCeeEEEEEEECCCCCcCCccCC-cceEEEEEEeeEEEEEEC--CE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEE
Confidence 45788999999999999999998 579999999999774442 56 4899999999999999999999 999999999
Q ss_pred EEEc
Q 048761 171 GSFN 174 (221)
Q Consensus 171 ~v~s 174 (221)
++.+
T Consensus 195 ~v~d 198 (394)
T 3bu7_A 195 DGLD 198 (394)
T ss_dssp EEEC
T ss_pred Eccc
Confidence 8775
No 89
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.06 E-value=8.9e-10 Score=98.81 Aligned_cols=91 Identities=15% Similarity=0.023 Sum_probs=73.1
Q ss_pred CCCeEEEEecCC-CCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEc
Q 048761 74 DTGLATIPVNPT-VFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFP 152 (221)
Q Consensus 74 ~~g~~v~~~~~~-~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P 152 (221)
..|+.+..++.. ..+.+.++ ++....++||+..++|+|+. +|++||++|++++.+. ++ ++.+++||++++|
T Consensus 248 ~~G~~~~~~np~t~~~~~~ti--~~~~~~l~pG~~~~~H~h~~-~ev~~v~~G~g~~~v~---~~--~~~~~~GD~~~vP 319 (354)
T 2d40_A 248 WDGYKMRYVNPVTGGYPMPSM--GAFLQLLPKGFASRVARTTD-STIYHVVEGSGQVIIG---NE--TFSFSAKDIFVVP 319 (354)
T ss_dssp TTBEEEEECCTTTSSCSSSSC--EEEEEEECTTCBCCCBEESS-CEEEEEEEEEEEEEET---TE--EEEEETTCEEEEC
T ss_pred CCCeEEEEeCCCcCCCCCCcc--eeEEEEECCCCCCCceecCC-cEEEEEEeCeEEEEEC---CE--EEEEcCCCEEEEC
Confidence 356677766633 56666654 44566999999999999995 5999999999999984 55 4999999999999
Q ss_pred CCCeEEEEecCCCCEEEEEEEc
Q 048761 153 RGLMHFQMNVGDEPATIFGSFN 174 (221)
Q Consensus 153 ~G~~H~~~N~g~~~a~~l~v~s 174 (221)
++..|++.|. ++++++++.+
T Consensus 320 ~~~~H~~~n~--e~~~l~~~~d 339 (354)
T 2d40_A 320 TWHGVSFQTT--QDSVLFSFSD 339 (354)
T ss_dssp TTCCEEEEEE--EEEEEEEEES
T ss_pred CCCeEEEEeC--CCEEEEEEcC
Confidence 9999999994 6788887744
No 90
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.06 E-value=1.1e-09 Score=94.69 Aligned_cols=77 Identities=9% Similarity=0.097 Sum_probs=68.5
Q ss_pred ccceEEEEEEecCCCcCCC-ccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEE
Q 048761 92 TLGMSFVRADLRVGAINPP-HFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIF 170 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~pp-H~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 170 (221)
...+.+.+++++||+.++. |+|. .+|.+||++|++.+.+. ++ .+.+++||+++++++.+|++.|.|++++++|
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~-~eh~~~vL~G~g~y~l~---~~--~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl 256 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHY-NQHGLLLLEGQGIYRLG---DN--WYPVQAGDVIWMAPFVPQWYAALGKTRSRYL 256 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCS-CCEEEEEEECEEEEEET---TE--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred ccceEEEEEEECCCcCcCCceEcc-cceEEEEEeceEEEEEC---CE--EEEecCCCEEEECCCCcEEEEeCCCCCEEEE
Confidence 4578999999999999996 8886 68999999999999875 55 4999999999999999999999999999998
Q ss_pred EEEc
Q 048761 171 GSFN 174 (221)
Q Consensus 171 ~v~s 174 (221)
.--+
T Consensus 257 ~ykd 260 (266)
T 4e2q_A 257 LYKD 260 (266)
T ss_dssp EEEE
T ss_pred EEcc
Confidence 6544
No 91
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.06 E-value=7.8e-10 Score=95.98 Aligned_cols=86 Identities=12% Similarity=0.018 Sum_probs=73.1
Q ss_pred CCccccceEEEEEEecCCCcCCC-ccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCC
Q 048761 88 PGINTLGMSFVRADLRVGAINPP-HFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEP 166 (221)
Q Consensus 88 P~l~~~g~s~~rv~l~pgg~~pp-H~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~ 166 (221)
|.-....+.+.+++++||+.++. |.|. .+|.+||++|++++... ++ .+.|++||+++++.+..|+++|.|+++
T Consensus 184 p~~~~~~~~~~~~~l~pG~~i~~~~~h~-~e~~~~il~G~~~~~~~---~~--~~~v~~GD~~~~~~~~~h~~~n~g~~~ 257 (278)
T 1sq4_A 184 MSDMRHDMHVNIVNFEPGGVIPFAETHV-MEHGLYVLEGKAVYRLN---QD--WVEVEAGDFMWLRAFCPQACYSGGPGR 257 (278)
T ss_dssp TTCTTCSEEEEEEEECSSSEESCCCCCS-EEEEEEEEECEEEEEET---TE--EEEEETTCEEEEEESCCEEEECCSSSC
T ss_pred CCCcCCCeEEEEEEECCCCCcCCCCCCC-ccEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCCEEEEcCCCCC
Confidence 43345679999999999999986 5564 68999999999998874 56 499999999999999999999999999
Q ss_pred EEEEEEEcC-CCCC
Q 048761 167 ATIFGSFNS-QNPG 179 (221)
Q Consensus 167 a~~l~v~ss-~~pg 179 (221)
+++|.+.+- .+|.
T Consensus 258 ~~yl~~~d~nr~~~ 271 (278)
T 1sq4_A 258 FRYLLYKDVNRHMR 271 (278)
T ss_dssp EEEEEEEECSSCCC
T ss_pred EEEEEEEEcCCCcc
Confidence 999999884 3444
No 92
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.05 E-value=5.5e-10 Score=89.53 Aligned_cols=70 Identities=16% Similarity=0.177 Sum_probs=58.5
Q ss_pred eEEEEEEecCCCcCCCccCCCCcEEEEEEe--CcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 95 MSFVRADLRVGAINPPHFHPRATEIAYVVQ--GSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 95 ~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~--G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
+++.++++ +...++|||+...|++||++ |++++.+. ++ .+.+++||++++|+|..|++.+ +++++++
T Consensus 47 ~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~id---ge--~~~l~~GD~v~IPpg~~H~i~g----~l~~L~I 115 (157)
T 4h7l_A 47 VSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIELN---GQ--SYPLTKLLAISIPPLVRHRIVG----EATIINI 115 (157)
T ss_dssp CEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEET---TE--EEECCTTEEEEECTTCCEEEES----CEEEEEE
T ss_pred EEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEEC---CE--EEEeCCCCEEEECCCCeEeeEC----CEEEEEE
Confidence 45555555 45678999987789999999 99999985 56 4899999999999999999973 6999998
Q ss_pred EcC
Q 048761 173 FNS 175 (221)
Q Consensus 173 ~ss 175 (221)
++.
T Consensus 116 ~~P 118 (157)
T 4h7l_A 116 VSP 118 (157)
T ss_dssp EES
T ss_pred ECC
Confidence 874
No 93
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.03 E-value=3e-09 Score=96.77 Aligned_cols=76 Identities=22% Similarity=0.215 Sum_probs=67.6
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecC-CCCEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVG-DEPATIFG 171 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g-~~~a~~l~ 171 (221)
..+.+....++||+..++|.|. .+|++||++|++++.+. ++ .+.+++||++++|+|..|...|.| ++++++++
T Consensus 292 ~tl~~~~~~l~PG~~~~~HrH~-~~~v~~VleG~G~~~V~---ge--~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~ 365 (394)
T 3bu7_A 292 LTMGASMQMLRPGEHTKAHRHT-GNVIYNVAKGQGYSIVG---GK--RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFS 365 (394)
T ss_dssp SSCEEEEEEECTTCBCCCEEES-SCEEEEEEECCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECCSSCCEEEEE
T ss_pred CeeeEEEEEECCCCcCCCcccC-CcEEEEEEeCeEEEEEC---CE--EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEE
Confidence 3577888999999999999998 68999999999988774 55 499999999999999999999998 79999888
Q ss_pred EEc
Q 048761 172 SFN 174 (221)
Q Consensus 172 v~s 174 (221)
+.+
T Consensus 366 i~D 368 (394)
T 3bu7_A 366 FND 368 (394)
T ss_dssp EES
T ss_pred eeC
Confidence 754
No 94
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.03 E-value=5.6e-10 Score=100.68 Aligned_cols=78 Identities=21% Similarity=0.282 Sum_probs=69.0
Q ss_pred ccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 92 TLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
+..+.+....++||+..++|.|. .+|+.||++|++....++ |+ ...+++||++++|+|..|...|.|+++++++.
T Consensus 100 t~~L~a~~~~l~PG~~~~~HrH~-~~ev~~VleG~G~~~~vd--G~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~ 174 (368)
T 3nw4_A 100 SPTMWAAIQYLGPRETAPEHRHS-QNAFRFVVEGEGVWTVVN--GD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWID 174 (368)
T ss_dssp SSSCEEEEEEECTTCEEEEEEES-SCEEEECSSCEEEEEEET--TE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred CCceEEEEEEECCCCccCceecc-cceEEEEEecceEEEEEC--CE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEE
Confidence 35789999999999999999998 689999999999533332 55 49999999999999999999999999999999
Q ss_pred EEc
Q 048761 172 SFN 174 (221)
Q Consensus 172 v~s 174 (221)
+.+
T Consensus 175 v~D 177 (368)
T 3nw4_A 175 GLD 177 (368)
T ss_dssp EEC
T ss_pred ecc
Confidence 886
No 95
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.01 E-value=2.1e-09 Score=85.70 Aligned_cols=87 Identities=14% Similarity=0.075 Sum_probs=65.4
Q ss_pred CCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCC
Q 048761 75 TGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRG 154 (221)
Q Consensus 75 ~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G 154 (221)
.+..+..+...... ..+++..++++ ++. .|||...+|+.||++|++++.+. |+ .+.|++||+++||+|
T Consensus 50 ~~v~i~~l~s~~~~----~~~s~g~~~~e-~~~--~~~~~~~eE~~yVLeG~~~l~i~---g~--~~~l~~GD~i~iP~G 117 (151)
T 4axo_A 50 DVVYTKDLFTLEES----PRLGCGMMEMK-ETT--FDWTLNYDEIDYVIDGTLDIIID---GR--KVSASSGELIFIPKG 117 (151)
T ss_dssp CCEEEEECSCTTTC----SSCEEEEEEEE-EEE--EEEECSSEEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTT
T ss_pred CCEEEEEeecCCCC----CcEEEEEEEEc-Ccc--ccEeCCCcEEEEEEEeEEEEEEC---CE--EEEEcCCCEEEECCC
Confidence 44555555443321 14677777776 443 45666689999999999999973 56 499999999999999
Q ss_pred CeEEEEecCCCCEEEEEEEcC
Q 048761 155 LMHFQMNVGDEPATIFGSFNS 175 (221)
Q Consensus 155 ~~H~~~N~g~~~a~~l~v~ss 175 (221)
..|.+.|. ++++++++...
T Consensus 118 ~~h~~~n~--~~a~~l~V~~P 136 (151)
T 4axo_A 118 SKIQFSVP--DYARFIYVTYP 136 (151)
T ss_dssp CEEEEEEE--EEEEEEEEEEC
T ss_pred CEEEEEeC--CCEEEEEEECC
Confidence 99999997 68888888774
No 96
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.97 E-value=6.6e-09 Score=85.80 Aligned_cols=84 Identities=18% Similarity=0.264 Sum_probs=68.0
Q ss_pred EEEEEEecCCC----------cCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCC
Q 048761 96 SFVRADLRVGA----------INPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDE 165 (221)
Q Consensus 96 s~~rv~l~pgg----------~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~ 165 (221)
+...+.+.|+. ..++|+|+ ..|++||++|++++.+.+.+++.+...+++||++++|+|+.|+..+..+.
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~-~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~ 153 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHL-DEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKN 153 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECS-SCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTC
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECC-cceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCC
Confidence 44556677765 24899998 49999999999999998654566668999999999999999999988788
Q ss_pred CEEEEEEEcCCCCCce
Q 048761 166 PATIFGSFNSQNPGNQ 181 (221)
Q Consensus 166 ~a~~l~v~ss~~pg~~ 181 (221)
.+.++-+|..+ ||-.
T Consensus 154 ~~~airlF~~~-~~W~ 168 (191)
T 1vr3_A 154 YVKAMRLFVGE-PVWT 168 (191)
T ss_dssp CEEEEEEESSS-CCCC
T ss_pred CEEEEEEECCC-CCcc
Confidence 88888888854 4433
No 97
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=98.87 E-value=2.1e-08 Score=73.63 Aligned_cols=74 Identities=12% Similarity=0.203 Sum_probs=63.3
Q ss_pred EEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcCC-CCCceecc---cchhcCCCCHHHHHHHhCCCHHHHHHhhhc
Q 048761 139 FARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNSQ-NPGNQKIP---SAIFGSGIDVELLEKAFGLSPKQIGTMRRR 214 (221)
Q Consensus 139 ~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~-~pg~~~~~---~~lf~~~~p~evla~af~~~~~~v~~l~~~ 214 (221)
+...|++||+++||+|.+-...+.. ...+++.-.+. ++..+.++ +++++ .||.|+|+.+|+++.+++++|+..
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~-~l~~evla~aF~~s~ee~~~l~~~ 82 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIR-QIPRQVSDLTFPGSGEEVEELLEN 82 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTT-TSCHHHHHHHSSSCTHHHHHHTTS
T ss_pred hhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHH-hCCHHHHHHHcCCCHHHHHHHHhc
Confidence 4678999999999999999998874 48888775554 77777774 68998 999999999999999999999876
Q ss_pred C
Q 048761 215 F 215 (221)
Q Consensus 215 ~ 215 (221)
.
T Consensus 83 q 83 (93)
T 1dgw_Y 83 Q 83 (93)
T ss_dssp C
T ss_pred C
Confidence 5
No 98
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.83 E-value=5.4e-09 Score=77.61 Aligned_cols=64 Identities=20% Similarity=0.257 Sum_probs=51.2
Q ss_pred EEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEE
Q 048761 99 RADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATI 169 (221)
Q Consensus 99 rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 169 (221)
..+++||.. ++| |+ ..|++||++|++++.+.+ ++ .+.|++||+++||+|.+|.+.|.++.+..+
T Consensus 35 ~~~~~pg~~-~~h-H~-~~E~~~Vl~G~~~~~i~~--g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~y 98 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YD-TNETCYILEGKVEVTTED--GK--KYVIEKGDLVTFPKGLRCRWKVLEPVRKHY 98 (101)
T ss_dssp EEEECSEEE-EEE-CS-SCEEEEEEEEEEEEEETT--CC--EEEEETTCEEEECTTCEEEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CC-ceEEEEEEeCEEEEEECC--CC--EEEECCCCEEEECCCCcEEEEeCCCeeEEE
Confidence 567777764 356 76 799999999999998741 44 489999999999999999999987654443
No 99
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.81 E-value=2e-08 Score=80.53 Aligned_cols=88 Identities=20% Similarity=0.205 Sum_probs=69.5
Q ss_pred CCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCC
Q 048761 75 TGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRG 154 (221)
Q Consensus 75 ~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G 154 (221)
.|.++..+... | ..+..+.+++++||+..++|+|+ ..|.+|||+|++.+. +++ ..+++||.++.|+|
T Consensus 27 ~Gv~~~~L~~d--~---~~g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~---e~~----~~~~~Gd~~~~P~g 93 (159)
T 3ebr_A 27 NDVMVKYFKID--P---VRGETITLLKAPAGMEMPRHHHT-GTVIVYTVQGSWRYK---EHD----WVAHAGSVVYETAS 93 (159)
T ss_dssp SSSEEEEEEEE--T---TTTEEEEEEEECSSCBCCCEEES-SCEEEEEEESCEEET---TSS----CCBCTTCEEEECSS
T ss_pred CCEEEEEeeEc--C---CCCeEEEEEEECCCCCcccccCC-CCEEEEEEEeEEEEe---CCC----eEECCCeEEEECCC
Confidence 45666665421 1 12567889999999999999998 589999999998752 222 47999999999999
Q ss_pred CeEEEEec--CCCCEEEEEEEcC
Q 048761 155 LMHFQMNV--GDEPATIFGSFNS 175 (221)
Q Consensus 155 ~~H~~~N~--g~~~a~~l~v~ss 175 (221)
..|...+. +++.++++.+.+.
T Consensus 94 ~~H~~~~~~~~~e~~~~~~~~~G 116 (159)
T 3ebr_A 94 TRHTPQSAYAEGPDIITFNIVAG 116 (159)
T ss_dssp EEECEEESSSSSSCEEEEEEEES
T ss_pred CcceeEeCCCCCCCEEEEEEecC
Confidence 99999998 7889998887664
No 100
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.81 E-value=9.2e-09 Score=87.49 Aligned_cols=72 Identities=17% Similarity=0.204 Sum_probs=62.5
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
..+.+.+++++||+....|. .+|++||++|++++.+. ++ .+.|++||.++||+|.+|.+.|. ++++++++
T Consensus 48 ~~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~~---~~--~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l~v 117 (246)
T 1sfn_A 48 ARFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAVG---GE--TRTLREYDYVYLPAGEKHMLTAK--TDARVSVF 117 (246)
T ss_dssp CSSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEECS---SC--EEEECTTEEEEECTTCCCEEEEE--EEEEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeC--CCEEEEEE
Confidence 36788999999999877774 68999999999999875 55 48999999999999999999998 77888877
Q ss_pred Ec
Q 048761 173 FN 174 (221)
Q Consensus 173 ~s 174 (221)
..
T Consensus 118 ~~ 119 (246)
T 1sfn_A 118 EK 119 (246)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 101
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.81 E-value=1.5e-08 Score=83.60 Aligned_cols=70 Identities=17% Similarity=0.173 Sum_probs=61.0
Q ss_pred eEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEc
Q 048761 95 MSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFN 174 (221)
Q Consensus 95 ~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~s 174 (221)
..+..+.++||+.+|.|+|+ ..|+.||++|++. + +. ..+.+||++++|+|..|..++.+++.++++++.+
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~-g~E~~~VL~G~f~----d--e~---~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~~d 194 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHR-GLELTLVLQGAFR----D--ET---DRFGAGDIEIADQELEHTPVAERGLDCICLAATD 194 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCS-SCEEEEEEESEEE----C--SS---SEEETTCEEEECSSCCCCCEECSSSCEEEEEEEC
T ss_pred cEEEEEEECCCCCCCCcCCC-CeEEEEEEEEEEE----C--Cc---EEECCCeEEEeCcCCccCCEeCCCCCEEEEEEec
Confidence 46688999999999999997 7899999999965 2 22 5789999999999999999998788999988765
No 102
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.76 E-value=7.2e-09 Score=84.75 Aligned_cols=67 Identities=16% Similarity=0.236 Sum_probs=56.7
Q ss_pred CCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcCC
Q 048761 108 NPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNSQ 176 (221)
Q Consensus 108 ~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~ 176 (221)
.++|+|+ ..|+.||++|++.+.+. .+++.+...+++||++++|+|+.|++.+..+..+.++-+|...
T Consensus 93 ~~~H~H~-~~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~ 159 (179)
T 1zrr_A 93 LNEHTHG-EDEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP 159 (179)
T ss_dssp HSCBEES-SCEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG
T ss_pred ccceECC-hheEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC
Confidence 5799998 59999999999999876 3367666789999999999999999988777778888788754
No 103
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.75 E-value=3.3e-08 Score=79.76 Aligned_cols=74 Identities=22% Similarity=0.315 Sum_probs=61.0
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecC--CCCEEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVG--DEPATIFG 171 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g--~~~a~~l~ 171 (221)
+..+.++.++||+.+|+|+|+ ..|.+|||+|++... ..+. +.+++||.++.|+|..|...+.. ++.++.+.
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~f~~~---~~~~---~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l~ 114 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHT-GTVHMYTISGCWYYT---EYPG---QKQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIF 114 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEES-SCEEEEEEESEEEET---TCTT---SCEETTEEEEECTTCEECEECCTTCSSCEEEEE
T ss_pred CcEEEEEEECCCCcCCcccCC-CCEEEEEEEEEEEEC---CCce---EEECCCeEEEeCCCCceeeEeCCCCCCCcEEEE
Confidence 567889999999999999998 689999999999852 1113 67899999999999999998854 34787777
Q ss_pred EEc
Q 048761 172 SFN 174 (221)
Q Consensus 172 v~s 174 (221)
+..
T Consensus 115 v~~ 117 (165)
T 3cjx_A 115 MLS 117 (165)
T ss_dssp EEE
T ss_pred EEe
Confidence 666
No 104
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.74 E-value=1.3e-08 Score=78.22 Aligned_cols=67 Identities=10% Similarity=0.076 Sum_probs=55.1
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCC
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEP 166 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~ 166 (221)
.+++...++.||... .|+|. .+|++||++|++++.+. +++ ...|++||+++||+|..|.+.|.+...
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~-~~E~~~Vl~G~~~l~~~--~g~--~~~l~~GD~~~ip~g~~h~~~~~~~~r 114 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTG-YIEYCHIIEGEARLVDP--DGT--VHAVKAGDAFIMPEGYTGRWEVDRHVK 114 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTT-EEEEEEEEEEEEEEECT--TCC--EEEEETTCEEEECTTCCCEEEEEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCC-CcEEEEEEEEEEEEEEC--CCe--EEEECCCCEEEECCCCeEEEEECCcee
Confidence 478888899998654 57775 38999999999998873 255 489999999999999999999986544
No 105
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.73 E-value=5.5e-08 Score=79.15 Aligned_cols=79 Identities=20% Similarity=0.245 Sum_probs=63.0
Q ss_pred ceEEEEEEecCCCcCCCccCCC------CcEEEEEEeCcEEEEEEeCCCce------------------EEEEecCCcEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPR------ATEIAYVVQGSVYSGFVDSSSRV------------------FARVIKQGEVM 149 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~------a~E~~yVl~G~~~v~~~~~~~k~------------------~~~~L~~GDv~ 149 (221)
.....++.+.||...|.|.|+. ..|-++|++|++++.+.+ ++. -...|++||.+
T Consensus 52 ~Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g--~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesv 129 (175)
T 2y0o_A 52 RYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEG--EKTPLPKVLPPQEDREHYTVWHEIELEPGGQY 129 (175)
T ss_dssp SEEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESS--SCCSSCSCCCCGGGGGGCCCCEEEEECTTCEE
T ss_pred CceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECC--ccccCcceeccCCceeeecCCcEEEECCCCEE
Confidence 4788899999999999999998 899999999999887742 121 13599999999
Q ss_pred EEcCCCeEEEEecCCCCEEEEEEEcCC
Q 048761 150 VFPRGLMHFQMNVGDEPATIFGSFNSQ 176 (221)
Q Consensus 150 ~~P~G~~H~~~N~g~~~a~~l~v~ss~ 176 (221)
.+|+|+.|+++| +.+. +++.-+++.
T Consensus 130 tIppg~~H~f~a-geeg-vli~EvSt~ 154 (175)
T 2y0o_A 130 TIPPNTKHWFQA-GEEG-AVVTEMSST 154 (175)
T ss_dssp EECTTCCEEEEE-EEEE-EEEEEEEEC
T ss_pred EECCCCcEEEEe-CCCC-EEEEEEeCC
Confidence 999999999999 3334 444555543
No 106
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.71 E-value=9.8e-09 Score=80.81 Aligned_cols=76 Identities=12% Similarity=-0.009 Sum_probs=59.2
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEEEEcCCCeEE-EEecCCCCEEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVMVFPRGLMHF-QMNVGDEPATIFG 171 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~~~P~G~~H~-~~N~g~~~a~~l~ 171 (221)
|-.+.+++++||+..++|+|+ ..|.+|||+|+++... +.. ....+++||.++.|+|..|. ..+ .+.++++.
T Consensus 43 g~~~~~~~~~pG~~~p~H~H~-~~ee~~VL~G~~~~~~----g~~~~~~~~~~Gd~~~~p~g~~H~p~~~--~e~~~~l~ 115 (145)
T 2o1q_A 43 GSWTAIFDCPAGSSFAAHVHV-GPGEYFLTKGKMDVRG----GKAAGGDTAIAPGYGYESANARHDKTEF--PVASEFYM 115 (145)
T ss_dssp TEEEEEEEECTTEEECCEEES-SCEEEEEEEEEEEETT----CGGGTSEEEESSEEEEECTTCEESCCEE--EEEEEEEE
T ss_pred ccEEEEEEECCCCCCCccCCC-CCEEEEEEEeEEEEcC----CCEecceEeCCCEEEEECcCCccCCeEC--CCCeEEEE
Confidence 346788999999999999998 4677999999998542 321 12789999999999999999 443 34577777
Q ss_pred EEcCC
Q 048761 172 SFNSQ 176 (221)
Q Consensus 172 v~ss~ 176 (221)
+++..
T Consensus 116 ~~~gp 120 (145)
T 2o1q_A 116 SFLGP 120 (145)
T ss_dssp EEESC
T ss_pred EECCc
Confidence 77753
No 107
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.70 E-value=9.9e-08 Score=85.21 Aligned_cols=79 Identities=13% Similarity=0.109 Sum_probs=64.4
Q ss_pred CccccceEEEEEEecCC---CcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-ceEEEEecCCcEEEEcCCCeEEEEecCC
Q 048761 89 GINTLGMSFVRADLRVG---AINPPHFHPRATEIAYVVQGSVYSGFVDSSS-RVFARVIKQGEVMVFPRGLMHFQMNVGD 164 (221)
Q Consensus 89 ~l~~~g~s~~rv~l~pg---g~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~-k~~~~~L~~GDv~~~P~G~~H~~~N~g~ 164 (221)
..+...+++.++++.++ +..+.|.|+ .+|++||++|++++.+. + + .+.|++||++++|+|.+|.+.|.++
T Consensus 243 ~~~~~~f~~~~i~~~~~~~g~~~~~h~~~-~~~~~~vleG~~~i~i~---g~~--~~~l~~Gd~~~iPag~~h~~~~~~~ 316 (350)
T 1juh_A 243 QAQDTNYTLSTISMSTTPSTVTVPTWSFP-GACAFQVQEGRVVVQIG---DYA--ATELGSGDVAFIPGGVEFKYYSEAY 316 (350)
T ss_dssp HHGGGCEEEEEEEECCCCTTSCCCCBCCS-SCEEEEEEESCEEEEET---TSC--CEEECTTCEEEECTTCCEEEEESSS
T ss_pred cCceeEEEEEEEeeccccCCCCCCcccCC-CcEEEEEEeeEEEEEEC---CeE--EEEeCCCCEEEECCCCCEEEEecCC
Confidence 33434578888888884 467889997 79999999999999986 4 4 4899999999999999999999865
Q ss_pred CCEEEEEEEc
Q 048761 165 EPATIFGSFN 174 (221)
Q Consensus 165 ~~a~~l~v~s 174 (221)
. +.++.+.+
T Consensus 317 ~-~~~l~~~~ 325 (350)
T 1juh_A 317 F-SKVLFVSS 325 (350)
T ss_dssp S-EEEEEEEE
T ss_pred e-EEEEEEec
Confidence 4 66666655
No 108
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.70 E-value=1.2e-07 Score=76.75 Aligned_cols=67 Identities=16% Similarity=0.192 Sum_probs=54.3
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecC
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVG 163 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g 163 (221)
.+.++. .-.|++...+|.|+ .+|++||++|++++.+.+. |+.....|++||++++|+|++|+-...+
T Consensus 35 ~~~V~~-v~Gpn~r~d~H~h~-~dE~FyvlkG~m~i~v~d~-g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 35 DFIVTV-VGGPNHRTDYHDDP-LEEFFYQLRGNAYLNLWVD-GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp SEEEEE-ECSCBCCCCEEECS-SCEEEEEEESCEEEEEEET-TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cEEEEE-EcCCCcCccCcCCC-CceEEEEEeeEEEEEEEcC-CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 344432 34577789999886 7999999999999999863 4445699999999999999999987654
No 109
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.67 E-value=4.2e-07 Score=73.67 Aligned_cols=85 Identities=14% Similarity=0.250 Sum_probs=72.2
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEe-CCCc---eEEEEecCCcEEEEcCCCeEEEEecCCCCEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVD-SSSR---VFARVIKQGEVMVFPRGLMHFQMNVGDEPATI 169 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~-~~~k---~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 169 (221)
++++..+...||...++|-|..+..+++|++|+++..... ++++ .....+++||++++|++.+|.+.|.++++++.
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVS 147 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVS 147 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEE
Confidence 5789999999999999999987778999999999987643 2232 12578999999999999999999999999999
Q ss_pred EEEEcCCCC
Q 048761 170 FGSFNSQNP 178 (221)
Q Consensus 170 l~v~ss~~p 178 (221)
|-+++....
T Consensus 148 lHvY~pp~~ 156 (171)
T 3eqe_A 148 LHVYSPPLE 156 (171)
T ss_dssp EEEEESCCC
T ss_pred EEEeCCCcc
Confidence 999986543
No 110
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.62 E-value=6.8e-08 Score=77.05 Aligned_cols=105 Identities=10% Similarity=0.024 Sum_probs=72.7
Q ss_pred CCCCCeEEecCCCCCCcC--CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEe
Q 048761 56 ATTDDFVFSGLKSAGNFS--DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVD 133 (221)
Q Consensus 56 vt~~df~~~~l~~~~~~~--~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~ 133 (221)
|..+|..|. |.+.. +.|..+..+. ..| ..|....+++++||+.+++|+|+ ..|.+|||+|++..+.++
T Consensus 14 v~~d~~~W~----p~P~~l~~~Gv~~k~L~--~~~---e~g~~t~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~~Gd 83 (153)
T 3bal_A 14 VKISDNNYV----PFPEAFSDGGITWQLLH--SSP---ETSSWTAIFNCPAGSSFASHIHA-GPGEYFLTKGKMEVRGGE 83 (153)
T ss_dssp EECCGGGCE----ECCGGGEESCCEEEEEE--EET---TTTEEEEEEEECTTEEECCEEES-SCEEEEEEESEEEETTCG
T ss_pred EccccCcee----cCCCccCCCCeEEEEEE--ECC---ccceEEEEEEeCCCCCccCccCC-CCEEEEEEEEEEEecCcc
Confidence 445666565 32211 3567777763 334 24788999999999999999999 688899999999875432
Q ss_pred CCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEc
Q 048761 134 SSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFN 174 (221)
Q Consensus 134 ~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~s 174 (221)
. .....+++|+.++-|+|..|...-. ++..+++.++.
T Consensus 84 ~---~~~~~~~aGsYv~ePpGs~H~p~~~-~~~~~~~~~~~ 120 (153)
T 3bal_A 84 Q---EGGSTAYAPSYGFESSGALHGKTFF-PVESQFYMTFL 120 (153)
T ss_dssp G---GTSEEEESSEEEEECTTCEESCCEE-SSCEEEEEEEE
T ss_pred c---cCccccCCCeEEEcCCCCcccceeC-CCCeEEEEEEE
Confidence 1 0137889999999999999985432 23344454554
No 111
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.57 E-value=3.9e-07 Score=80.31 Aligned_cols=84 Identities=23% Similarity=0.245 Sum_probs=68.4
Q ss_pred EEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC-CceEEEEecC-C---cEEEEcCCCeEEEEecCCCCEEEE
Q 048761 96 SFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS-SRVFARVIKQ-G---EVMVFPRGLMHFQMNVGDEPATIF 170 (221)
Q Consensus 96 s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~-~k~~~~~L~~-G---Dv~~~P~G~~H~~~N~g~~~a~~l 170 (221)
.....+..||....+|||....|.++|++|++.+.+.+.. ++. ..+.. | +.+++|+|..|.+.|.|+++++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~ 350 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEI--IEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTI 350 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCC--EEEEEETTBCCEEEECTTEEEEEEECSSSCEEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCcE--EEEEecCCcceEEEeCCCceEEeEEcCCCcEEEE
Confidence 3455678999999999999999999999999999887544 454 55555 7 999999999999999999999988
Q ss_pred EEEc----CCCCCce
Q 048761 171 GSFN----SQNPGNQ 181 (221)
Q Consensus 171 ~v~s----s~~pg~~ 181 (221)
...+ .++|.+.
T Consensus 351 ~~~~~~y~~~~~d~~ 365 (369)
T 3st7_A 351 MWVNEMFDPNQPDTY 365 (369)
T ss_dssp EEESSCCCSSSCCCE
T ss_pred EecCcccCCCCCccc
Confidence 7766 2455544
No 112
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.49 E-value=3.7e-07 Score=71.42 Aligned_cols=76 Identities=11% Similarity=0.129 Sum_probs=56.6
Q ss_pred eEEEEEEecCC----CcCCCccCCCCcEEEEEEeCcEEEEEEeCC---CceEEEEecCCcEEEEcCCCeEEEEecCCCCE
Q 048761 95 MSFVRADLRVG----AINPPHFHPRATEIAYVVQGSVYSGFVDSS---SRVFARVIKQGEVMVFPRGLMHFQMNVGDEPA 167 (221)
Q Consensus 95 ~s~~rv~l~pg----g~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~---~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a 167 (221)
-.++...+.|. ++..+|.|+..+|+++|++|++++.+.+.. .+.....|++|+++++|+|+.|.-....+ +
T Consensus 25 W~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e--~ 102 (140)
T 3d0j_A 25 WLVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKD--T 102 (140)
T ss_dssp EEEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTT--C
T ss_pred EEEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCc--e
Confidence 34555555554 456789999999999999999999998421 01235899999999999999999887544 4
Q ss_pred EEEEE
Q 048761 168 TIFGS 172 (221)
Q Consensus 168 ~~l~v 172 (221)
.++.+
T Consensus 103 ~vLLi 107 (140)
T 3d0j_A 103 KMMYV 107 (140)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44433
No 113
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.48 E-value=2.2e-06 Score=71.43 Aligned_cols=81 Identities=21% Similarity=0.201 Sum_probs=68.9
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEe--CCCce----EEEEecCCcEEEEcC--CCeEEEEec-CC
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVD--SSSRV----FARVIKQGEVMVFPR--GLMHFQMNV-GD 164 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~--~~~k~----~~~~L~~GDv~~~P~--G~~H~~~N~-g~ 164 (221)
.+++..+...||...++|-|.. ..+++|++|+++..+.. .+++. ....+++||++++++ |.+|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 5789999999999999999985 99999999999887643 22221 148999999999999 999999998 78
Q ss_pred CCEEEEEEEcC
Q 048761 165 EPATIFGSFNS 175 (221)
Q Consensus 165 ~~a~~l~v~ss 175 (221)
++++.|-++..
T Consensus 157 ~~avsLHvY~~ 167 (208)
T 2gm6_A 157 RVSISIHVYGA 167 (208)
T ss_dssp SCEEEEEEESS
T ss_pred CcEEEEEEEcC
Confidence 89999988875
No 114
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.47 E-value=7.6e-07 Score=72.06 Aligned_cols=58 Identities=21% Similarity=0.375 Sum_probs=49.2
Q ss_pred cCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC----ceEEEEecCCcEEEEcCCCeEEEEec
Q 048761 103 RVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS----RVFARVIKQGEVMVFPRGLMHFQMNV 162 (221)
Q Consensus 103 ~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~----k~~~~~L~~GDv~~~P~G~~H~~~N~ 162 (221)
.|+....+|.|+ .+|++|+++|++.+.+.+. | +.....|++||++++|+|++|+-...
T Consensus 42 GPn~r~D~H~~~-~eE~Fy~lkG~m~l~v~d~-g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 42 GPNERTDYHINP-TPEWFYQKKGSMLLKVVDE-TDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp SSBCCSCEEECS-SCEEEEEEESCEEEEEEEC-SSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred CCCcCCcCcCCC-CceEEEEEeCEEEEEEEcC-CCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 455778999776 8999999999999999974 4 34469999999999999999998664
No 115
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.45 E-value=9.6e-07 Score=79.55 Aligned_cols=89 Identities=17% Similarity=0.129 Sum_probs=69.4
Q ss_pred CeE-EEEecCC-CCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcC
Q 048761 76 GLA-TIPVNPT-VFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPR 153 (221)
Q Consensus 76 g~~-v~~~~~~-~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~ 153 (221)
|.. +.-++.. .-+.+. .+.+....++||...++|.|. .+++++|++|++++.+. ++ +...++||+|++|+
T Consensus 260 g~~~~~y~NP~tg~~~~p--ti~~~~~~L~pG~~t~~hRht-~s~Vy~V~eG~G~~~I~---~~--~~~w~~gD~fvvP~ 331 (368)
T 3nw4_A 260 GHAAIRYVNPTTGGDVMP--TLRCEFHRLRAGTETATRNEV-GSTVFQVFEGAGAVVMN---GE--TTKLEKGDMFVVPS 331 (368)
T ss_dssp TEEEEECBCTTTSSBSSS--SCEEEEEEECTTCBCCCEEES-SCEEEEEEESCEEEEET---TE--EEEECTTCEEEECT
T ss_pred ceEEEEEeCCCCCCCcch--hHHhheEEECCCCccCCeecc-ccEEEEEEeCcEEEEEC---CE--EEEecCCCEEEECC
Confidence 555 5544432 223344 456667789999999999998 68999999999999985 45 48999999999999
Q ss_pred CCeEEEEecCCCCEEEEEEEc
Q 048761 154 GLMHFQMNVGDEPATIFGSFN 174 (221)
Q Consensus 154 G~~H~~~N~g~~~a~~l~v~s 174 (221)
+..|...|. +++.++.+-+
T Consensus 332 w~~h~~~n~--~~a~Lf~~~D 350 (368)
T 3nw4_A 332 WVPWSLQAE--TQFDLFRFSD 350 (368)
T ss_dssp TCCEEEEES--SSEEEEEEES
T ss_pred CCcEEEEeC--CCEEEEEEeC
Confidence 999999996 5777776543
No 116
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.39 E-value=2.1e-06 Score=66.54 Aligned_cols=71 Identities=13% Similarity=0.132 Sum_probs=53.8
Q ss_pred EEEEEecCCCc-----CCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCC-CCEEEE
Q 048761 97 FVRADLRVGAI-----NPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGD-EPATIF 170 (221)
Q Consensus 97 ~~rv~l~pgg~-----~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~-~~a~~l 170 (221)
..+....|+.. ..||.|+ .-|++||++|++++.+. ++ .+.+++||++++|+|.+|...+.++ ++...+
T Consensus 15 ~G~~~~~~~~~~~~~~~~p~~h~-~~~i~~v~~G~~~~~i~---~~--~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~ 88 (164)
T 2arc_A 15 AGLTPIEANGYLDFFIDRPLGMK-GYILNLTIRGQGVVKNQ---GR--EFVCRPGDILLFPPGEIHHYGRHPEAREWYHQ 88 (164)
T ss_dssp EEEEEEETTSTTCSCEEETTCCS-SEEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEEECTTSSEEEEE
T ss_pred hcceeeccCCchhhhhccccCCC-ceEEEEEEEeEEEEEEC---CE--EEEecCCeEEEEcCCCCEEEEeCCCCCcEEEE
Confidence 34445555432 2489997 68999999999999875 55 4999999999999999999988763 555555
Q ss_pred EEE
Q 048761 171 GSF 173 (221)
Q Consensus 171 ~v~ 173 (221)
++.
T Consensus 89 ~i~ 91 (164)
T 2arc_A 89 WVY 91 (164)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 117
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.33 E-value=2.1e-06 Score=72.25 Aligned_cols=84 Identities=19% Similarity=0.166 Sum_probs=64.7
Q ss_pred CCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCC
Q 048761 75 TGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRG 154 (221)
Q Consensus 75 ~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G 154 (221)
.|.....+.... . ..+..+..+.++||+..|+|+|+ ..|.+|||+|++. + +. ..+.+||.+..|+|
T Consensus 27 ~Gv~~~~L~~~~--~--e~g~~~~lvr~~pG~~~p~H~H~-g~Ee~~VL~G~f~----d--~~---~~~~~Gd~~~~P~g 92 (223)
T 3o14_A 27 KGVERRMLDRIG--G--EVARATSIVRYAPGSRFSAHTHD-GGEEFIVLDGVFQ----D--EH---GDYPAGTYVRNPPT 92 (223)
T ss_dssp TTEEEEEEEEES--S--SSCEEEEEEEECTTEECCCEECT-TCEEEEEEEEEEE----E--TT---EEEETTEEEEECTT
T ss_pred CCEEEEEeecCC--C--ccccEEEEEEECCCCCcccccCC-CCEEEEEEEeEEE----E--CC---eEECCCeEEEeCCC
Confidence 455655554221 1 12456778999999999999998 6899999999975 2 22 68999999999999
Q ss_pred CeEEEEecCCCCEEEEEEEc
Q 048761 155 LMHFQMNVGDEPATIFGSFN 174 (221)
Q Consensus 155 ~~H~~~N~g~~~a~~l~v~s 174 (221)
..|.... ++.+.+++...
T Consensus 93 ~~H~p~a--~~gc~~~vk~~ 110 (223)
T 3o14_A 93 TSHVPGS--AEGCTIFVKLW 110 (223)
T ss_dssp CEECCEE--SSCEEEEEEES
T ss_pred CccccEe--CCCCEEEEEec
Confidence 9999876 56688887765
No 118
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.32 E-value=2.1e-06 Score=74.27 Aligned_cols=65 Identities=17% Similarity=0.257 Sum_probs=53.1
Q ss_pred CCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 104 VGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 104 pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
|+....+| |...+|++|+++|.+.+.+.+. |+.....|++||++++|+|++|.-.... ..+.+.+
T Consensus 40 pN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~-g~~~~V~i~eGemfllP~gv~HsP~r~~--et~gLvi 104 (286)
T 2qnk_A 40 PNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQ-GKHRDVVIRQGEIFLLPARVPHSPQRFA--NTVGLVV 104 (286)
T ss_dssp CBCCCCEE-ECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTEEEEECTTCCEEEEECT--TCEEEEE
T ss_pred CCcCccCc-CCCCCeEEEEEeCeEEEEEEeC-CceeeEEECCCeEEEeCCCCCcCCcccC--CeEEEEE
Confidence 44558899 8889999999999999999974 5556799999999999999999987744 3444433
No 119
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.27 E-value=1.5e-05 Score=66.04 Aligned_cols=85 Identities=15% Similarity=0.151 Sum_probs=70.9
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeC-CC------ceEEEEecCCcEEEE-cCCCeEEEEecC-C
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDS-SS------RVFARVIKQGEVMVF-PRGLMHFQMNVG-D 164 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~-~~------k~~~~~L~~GDv~~~-P~G~~H~~~N~g-~ 164 (221)
.+++..+...||...++|-|..+..+++|++|+++....+- ++ ......+++||+.++ |++.+|.+.|.+ +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 47888999999999999999877899999999999886431 11 122589999999999 888899999998 7
Q ss_pred CCEEEEEEEcCCCC
Q 048761 165 EPATIFGSFNSQNP 178 (221)
Q Consensus 165 ~~a~~l~v~ss~~p 178 (221)
++++-|=++.....
T Consensus 149 ~~avSlHvY~pp~~ 162 (200)
T 3eln_A 149 EPAVSLHLYSPPFD 162 (200)
T ss_dssp CCEEEEEEEESCCS
T ss_pred CCEEEEEeCCCCcc
Confidence 89999988886544
No 120
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.95 E-value=5.5e-05 Score=64.23 Aligned_cols=72 Identities=19% Similarity=0.138 Sum_probs=55.0
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSF 173 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ 173 (221)
++++..+.+ .|..... .+| .+|++||++|++++.. +|+ ...+++||+++||+|..|.+...+.... +++++
T Consensus 46 ~~~~G~~~~-~g~~~v~-~~p-~dE~~~VleG~~~lt~---~g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~~~-~y~~~ 116 (238)
T 3myx_A 46 GIAAGIVEF-GTALSVE-AYP-YTEMLVMHRGSVTLTS---GTD--SVTLSTGESAVIGRGTQVRIDAQPESLW-AFCAS 116 (238)
T ss_dssp SEEEEEEEE-CSEEEES-SCS-SEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECTTEEE-EEEEE
T ss_pred CeEEEEEEe-ccccccc-cCC-CcEEEEEEEeEEEEEC---CCe--EEEEcCCCEEEECCCCEEEEEecCCeEE-EEEec
Confidence 688888888 5544322 233 4899999999999986 255 4899999999999999999998766544 44556
Q ss_pred c
Q 048761 174 N 174 (221)
Q Consensus 174 s 174 (221)
.
T Consensus 117 ~ 117 (238)
T 3myx_A 117 T 117 (238)
T ss_dssp C
T ss_pred c
Confidence 6
No 121
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.94 E-value=0.00014 Score=57.05 Aligned_cols=96 Identities=9% Similarity=0.077 Sum_probs=66.9
Q ss_pred CCeEEEEecC-CCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcE-EEEc
Q 048761 75 TGLATIPVNP-TVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEV-MVFP 152 (221)
Q Consensus 75 ~g~~v~~~~~-~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv-~~~P 152 (221)
..+.++.+.. .+.|- .- .-.....+++||....+|.|....|++++++|++.+.+.+.. ...+..|.+... +.+|
T Consensus 16 ~RG~L~~~e~~~~ipf-~i-kRvy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~-~~~~~~L~~~~~gL~Ip 92 (141)
T 2pa7_A 16 SRGSLVAIEENKNIPF-SI-KRVYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGN-IIQEITLDSPAVGLYVG 92 (141)
T ss_dssp TTEEEEEEETTTTSSS-CC-CEEEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSS-CEEEEEECCTTEEEEEC
T ss_pred CCCcEEEEeccCCCCC-Cc-cEEEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECCc-EEEEEEECCCCcEEEeC
Confidence 3566777765 33442 11 112222345588888999999999999999999999996532 233566666554 9999
Q ss_pred CCCeEEEEecCCCCEEEEEEEc
Q 048761 153 RGLMHFQMNVGDEPATIFGSFN 174 (221)
Q Consensus 153 ~G~~H~~~N~g~~~a~~l~v~s 174 (221)
+|+.|.+.+.++. ++++.+-+
T Consensus 93 pgvWh~~~~~s~~-avllvlas 113 (141)
T 2pa7_A 93 PAVWHEMHDFSSD-CVMMVLAS 113 (141)
T ss_dssp TTCEEEEECCCTT-CEEEEEES
T ss_pred CCEEEEEEEcCCC-eEEEEECC
Confidence 9999999999875 66665544
No 122
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.91 E-value=0.00034 Score=56.44 Aligned_cols=131 Identities=15% Similarity=0.080 Sum_probs=93.7
Q ss_pred CCCeEEEEecCCCCC-CccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCc-EEEEEEeCCCceEEEE----ecCCc
Q 048761 74 DTGLATIPVNPTVFP-GINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGS-VYSGFVDSSSRVFARV----IKQGE 147 (221)
Q Consensus 74 ~~g~~v~~~~~~~~P-~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~-~~v~~~~~~~k~~~~~----L~~GD 147 (221)
|.|+..++.+...-+ +-.....+..+.-+.+|....+|... ++|+++...|. +++.+..++++..... +.+|+
T Consensus 27 PEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv~-sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge 105 (170)
T 1yud_A 27 VEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRLT-ADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGE 105 (170)
T ss_dssp TTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEECS-SCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTE
T ss_pred CCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEcC-CCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCc
Confidence 788888888765411 11223468888889999988899985 89999999998 5888887777754444 67799
Q ss_pred E--EEEcCCCeEEEEecCCCCEEEEEEEcCCCCCceecccchhcCCCCHHHHHHHhCCCHHHHHHhh
Q 048761 148 V--MVFPRGLMHFQMNVGDEPATIFGSFNSQNPGNQKIPSAIFGSGIDVELLEKAFGLSPKQIGTMR 212 (221)
Q Consensus 148 v--~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~~~~~~~lf~~~~p~evla~af~~~~~~v~~l~ 212 (221)
. ++||+|..+..++.+.+-+.+-++.. ||+..-...+ .+.+-|.+-|---.+.|++|-
T Consensus 106 ~pQ~vVP~G~wqaa~~~~g~~~LV~C~Va---PGF~f~dfel----~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 106 RPQFLVPKGCIFGSAMNQDGFSLVGCMVS---PGFTFDDFEL----FSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp ESCEEECTTCEEEEEESSSSEEEEEEEES---SCCCGGGCCB----CBHHHHHHSCCTTHHHHTTSC
T ss_pred eeEEEECCCCEEEEEECCCCcEEEEEEEC---CCccCCceEE----cCHHHHHhHCchhHHHHHHhh
Confidence 9 99999999999987324444444433 8886544434 346666667776777777764
No 123
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.88 E-value=0.00033 Score=58.41 Aligned_cols=83 Identities=22% Similarity=0.248 Sum_probs=68.3
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEe--CCCceE----EEEecCCcEEEEcCC--CeEEEEec-CC
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVD--SSSRVF----ARVIKQGEVMVFPRG--LMHFQMNV-GD 164 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~--~~~k~~----~~~L~~GDv~~~P~G--~~H~~~N~-g~ 164 (221)
.+++..+...||...|+|=|. ..-++.|++|+++-.... .+++.. ...+++||+.+|.++ .+|.+.|. ++
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 478899999999999999998 899999999999876643 223211 378999999999987 89999998 57
Q ss_pred CCEEEEEEEcCCC
Q 048761 165 EPATIFGSFNSQN 177 (221)
Q Consensus 165 ~~a~~l~v~ss~~ 177 (221)
++++-|=++....
T Consensus 151 ~~avSLHvYg~pl 163 (211)
T 3uss_A 151 RTSISIHVYGANI 163 (211)
T ss_dssp SCEEEEEEESSCG
T ss_pred CCEEEEEEcCCCC
Confidence 8899888887543
No 124
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.82 E-value=0.0003 Score=56.99 Aligned_cols=74 Identities=15% Similarity=0.147 Sum_probs=61.6
Q ss_pred EecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC------CceEEEEec---CCcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 101 DLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS------SRVFARVIK---QGEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 101 ~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~------~k~~~~~L~---~GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
...+|.....|+|....++++|++|++..-+++-. |+.....|. ....++||+|..|.+.|.++++++++.
T Consensus 59 ~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly 138 (174)
T 3ejk_A 59 EVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVAN 138 (174)
T ss_dssp EECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEE
T ss_pred ECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEE
Confidence 34678888999998889999999999999998632 345678888 567899999999999999987787776
Q ss_pred EEc
Q 048761 172 SFN 174 (221)
Q Consensus 172 v~s 174 (221)
..+
T Consensus 139 ~~s 141 (174)
T 3ejk_A 139 CTD 141 (174)
T ss_dssp EES
T ss_pred ECC
Confidence 655
No 125
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.69 E-value=0.00013 Score=55.30 Aligned_cols=62 Identities=15% Similarity=0.051 Sum_probs=47.5
Q ss_pred eEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEec
Q 048761 95 MSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNV 162 (221)
Q Consensus 95 ~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~ 162 (221)
.....-+..||... .+++. .+|++|||+|++++... +|+ ...+++||+++||+|....+.-.
T Consensus 42 ~~~GvWe~tPG~~~-~~~~~-~~E~~~iLeG~~~lt~d--dG~--~~~l~aGD~~~~P~G~~gtWev~ 103 (116)
T 3es4_A 42 TIVAVWMAEPGIYN-YAGRD-LEETFVVVEGEALYSQA--DAD--PVKIGPGSIVSIAKGVPSRLEIL 103 (116)
T ss_dssp CEEEEEEECSEEEE-ECCCS-EEEEEEEEECCEEEEET--TCC--CEEECTTEEEEECTTCCEEEEEC
T ss_pred EEEEEEecCCceeE-CeeCC-CcEEEEEEEeEEEEEeC--CCe--EEEECCCCEEEECCCCeEEEEEe
Confidence 45566688888653 33343 35999999999998864 355 38999999999999998888654
No 126
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.66 E-value=0.00026 Score=59.73 Aligned_cols=72 Identities=6% Similarity=0.002 Sum_probs=54.6
Q ss_pred ceEEEEEEecCCCc--CCCccCCCCcEEEEEEeCcEEEEEEeCCCc-eEEEEecCCcEEEEcCCCeEEEEec--CCCCEE
Q 048761 94 GMSFVRADLRVGAI--NPPHFHPRATEIAYVVQGSVYSGFVDSSSR-VFARVIKQGEVMVFPRGLMHFQMNV--GDEPAT 168 (221)
Q Consensus 94 g~s~~rv~l~pgg~--~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k-~~~~~L~~GDv~~~P~G~~H~~~N~--g~~~a~ 168 (221)
++-+...++..... .++|+|. .-|++||++|++. .+. ++ ...+.+++||++++|+|.+|.+... ++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~G~~~-~i~---~~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~ 80 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYIN-DYKMFWIDSGIAK-LID---KNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENIN 80 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEECS-SCEEEEESSSCEE-EEE---TTTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEE
T ss_pred hhhhhhhhhhcccchhccHhhhc-ceEEEEEecCceE-EEC---CccceeEEEcCCCEEEEcCCCceeeccccCCCcceE
Confidence 56677777777654 5889997 6999999999999 765 33 0028999999999999999998765 334444
Q ss_pred EE
Q 048761 169 IF 170 (221)
Q Consensus 169 ~l 170 (221)
.+
T Consensus 81 ~~ 82 (276)
T 3gbg_A 81 VS 82 (276)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 127
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.58 E-value=0.00033 Score=59.45 Aligned_cols=63 Identities=10% Similarity=0.074 Sum_probs=50.6
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEec
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNV 162 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~ 162 (221)
.++....+..||...+.+++ .+|+.|||||++++.-. +|+ ..++++||+++||+|..-.+.-.
T Consensus 166 ~~~~GiW~~tpG~~~~~~~~--~~E~~~ILeG~v~lt~~--~G~--~~~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPHK--IHELMNLIEGRVVLSLE--NGS--SLTVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp SCEEEEEEECCEEBCCEECS--SCEEEEEEECCEEEEET--TSC--EEEECTTCEEEECTTCEEEEEES
T ss_pred CEEEeEEEeCCCEEECCcCC--CCEEEEEEEeEEEEEeC--CCC--EEEECCCCEEEECCCCEEEEEEC
Confidence 47788888899886554433 58999999999998753 466 48999999999999998777655
No 128
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.41 E-value=0.00091 Score=57.26 Aligned_cols=74 Identities=19% Similarity=0.273 Sum_probs=57.9
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcC--CCeEEEEecCC-CCEEEEEEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPR--GLMHFQMNVGD-EPATIFGSF 173 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~--G~~H~~~N~g~-~~a~~l~v~ 173 (221)
+....+.||.-+++|-|.+-+.+.||++|+++-. |+.|. ...+++||+-++.+ |+.|.-.|..+ +++.++-++
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlW 141 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSEGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLW 141 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETTSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCCCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEE
Confidence 5667789998899999975444789999998744 55455 38999999999955 67999999754 688887776
Q ss_pred c
Q 048761 174 N 174 (221)
Q Consensus 174 s 174 (221)
-
T Consensus 142 i 142 (256)
T 2vec_A 142 L 142 (256)
T ss_dssp E
T ss_pred E
Confidence 3
No 129
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=97.07 E-value=0.0034 Score=53.16 Aligned_cols=75 Identities=20% Similarity=0.302 Sum_probs=58.4
Q ss_pred EEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEc--CCCeEEEEecC-CCCEEEEEE
Q 048761 96 SFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFP--RGLMHFQMNVG-DEPATIFGS 172 (221)
Q Consensus 96 s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P--~G~~H~~~N~g-~~~a~~l~v 172 (221)
.+....+.||.-+++|-|.+-+.+.||++|+++-. |+.|. ...+++||+-++- .|+.|.-.|.. ++++.++-+
T Consensus 42 v~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQl 117 (242)
T 1tq5_A 42 VINDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSMGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQI 117 (242)
T ss_dssp EEEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESSSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEE
T ss_pred eeccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCCCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEE
Confidence 45567788998889999976555999999998744 55454 3899999999995 55899999965 467887776
Q ss_pred Ec
Q 048761 173 FN 174 (221)
Q Consensus 173 ~s 174 (221)
+-
T Consensus 118 Wv 119 (242)
T 1tq5_A 118 WI 119 (242)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 130
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.04 E-value=0.0011 Score=55.61 Aligned_cols=78 Identities=19% Similarity=0.236 Sum_probs=58.8
Q ss_pred CCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCC
Q 048761 75 TGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRG 154 (221)
Q Consensus 75 ~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G 154 (221)
.|.++..++... +-.+..+.++||..+++|.| .+.|+ +||+|++. + +. ..+.+|+.+..|.|
T Consensus 133 ~Gv~~~~L~~~~-------~E~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d--~~---~~~~~GsWlR~P~g 194 (223)
T 3o14_A 133 EGISTSLLHEDE-------RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----V--ND---EVLGRNAWLRLPEG 194 (223)
T ss_dssp TTEEEEEEEECS-------SCEEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----E--TT---EEECTTEEEEECTT
T ss_pred CCeEEEEEecCC-------CcEEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----E--CC---ceECCCeEEEeCCC
Confidence 355555555332 23456678899999999999 78996 99999975 2 22 67999999999999
Q ss_pred CeEEEEecCCCCEEEEE
Q 048761 155 LMHFQMNVGDEPATIFG 171 (221)
Q Consensus 155 ~~H~~~N~g~~~a~~l~ 171 (221)
..|.... |++.+.++.
T Consensus 195 s~h~~~a-g~~g~~i~~ 210 (223)
T 3o14_A 195 EALSATA-GARGAKIWM 210 (223)
T ss_dssp CCEEEEE-EEEEEEEEE
T ss_pred CccCcEE-CCCCeEEEE
Confidence 9999877 566676553
No 131
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.96 E-value=0.0064 Score=53.88 Aligned_cols=72 Identities=18% Similarity=0.200 Sum_probs=54.4
Q ss_pred EEecC-CCcCCCccCCCCcEEEEEEeCcEEEEEE-eCC---------------------------------CceEEEEec
Q 048761 100 ADLRV-GAINPPHFHPRATEIAYVVQGSVYSGFV-DSS---------------------------------SRVFARVIK 144 (221)
Q Consensus 100 v~l~p-gg~~ppH~Hp~a~E~~yVl~G~~~v~~~-~~~---------------------------------~k~~~~~L~ 144 (221)
+-+.| |+..++|+.+ ..-++..+.|+=++.+. .+. ...+..+|+
T Consensus 145 ~~~gp~g~~~~~H~D~-~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDA-YTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECS-SEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECC-hhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 44555 7788999987 57788889999888877 322 012467999
Q ss_pred CCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 145 QGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 145 ~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
+||++++|+|..|+..+.+++...-+++
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsvsi 251 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNITF 251 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEEEE
T ss_pred CCcEEEeCCCccEEEEECCCCceEEEEE
Confidence 9999999999999999986555555544
No 132
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=96.92 E-value=0.0028 Score=53.54 Aligned_cols=79 Identities=18% Similarity=0.151 Sum_probs=58.7
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeC-cEEEEEEeCC--C-------------ceE------EEEecCCcEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQG-SVYSGFVDSS--S-------------RVF------ARVIKQGEVMVF 151 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G-~~~v~~~~~~--~-------------k~~------~~~L~~GDv~~~ 151 (221)
-..-..+.+.+|...|.|+|+.-.|-++..-| .+.+.+..++ + +.+ ...|+||+.+-+
T Consensus 105 ~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 105 CYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICL 184 (246)
T ss_dssp CEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEE
T ss_pred cceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEec
Confidence 46677788999999999999999999999998 5544443322 1 111 258999999999
Q ss_pred cCCCeEEEEecCCC-CEEEEEE
Q 048761 152 PRGLMHFQMNVGDE-PATIFGS 172 (221)
Q Consensus 152 P~G~~H~~~N~g~~-~a~~l~v 172 (221)
++|+.|+++..+.. ++.+-.+
T Consensus 185 ~Pg~~H~F~ae~g~G~vligEV 206 (246)
T 3kmh_A 185 PPGLYHSFWAEAGFGDVLVGEV 206 (246)
T ss_dssp CTTEEEEEEECTTSCCEEEEEE
T ss_pred CCCCEEEEEecCCCccEEEEEc
Confidence 99999999987652 4544433
No 133
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.90 E-value=0.0065 Score=50.00 Aligned_cols=70 Identities=21% Similarity=0.270 Sum_probs=56.3
Q ss_pred cCCCcCCCccCCCCcEEEEEEe-CcEEEEEEeCC-----CceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEc
Q 048761 103 RVGAINPPHFHPRATEIAYVVQ-GSVYSGFVDSS-----SRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFN 174 (221)
Q Consensus 103 ~pgg~~ppH~Hp~a~E~~yVl~-G~~~v~~~~~~-----~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~s 174 (221)
.+|....+|.|+ ..++++|++ |++.--+++-. ++.....|..+..++||+|..|.+.+.++. ++++...+
T Consensus 68 ~~GvlRGlH~h~-q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y~~s 143 (197)
T 1nxm_A 68 RKNVLRGLHAEP-WDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYSYLVN 143 (197)
T ss_dssp ETTBEEEEEECS-SCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEEEEES
T ss_pred CCCCcceeeecc-cceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEEECC
Confidence 577788999996 789999999 99655555543 567789999999999999999999998765 55554544
No 134
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=96.85 E-value=0.01 Score=48.28 Aligned_cols=71 Identities=17% Similarity=0.277 Sum_probs=54.8
Q ss_pred cCCCcCCCccC--CCCcEEEEEEeCcEEEEEEeCC------CceEEEEecC--CcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 103 RVGAINPPHFH--PRATEIAYVVQGSVYSGFVDSS------SRVFARVIKQ--GEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 103 ~pgg~~ppH~H--p~a~E~~yVl~G~~~v~~~~~~------~k~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
.+|.....|+| ....++++|++|++.--+++-. |+.....|.+ +..++||+|..|.+.+.++. ++++..
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEe
Confidence 37778899999 6689999999999754444422 4667788876 58899999999999999877 665555
Q ss_pred Ec
Q 048761 173 FN 174 (221)
Q Consensus 173 ~s 174 (221)
.+
T Consensus 135 ~s 136 (185)
T 1ep0_A 135 CT 136 (185)
T ss_dssp ES
T ss_pred cC
Confidence 44
No 135
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.70 E-value=0.018 Score=46.80 Aligned_cols=71 Identities=15% Similarity=0.219 Sum_probs=54.5
Q ss_pred cCCCcCCCccC--CCCcEEEEEEeCcEEEEEEeCC------CceEEEEecC--CcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 103 RVGAINPPHFH--PRATEIAYVVQGSVYSGFVDSS------SRVFARVIKQ--GEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 103 ~pgg~~ppH~H--p~a~E~~yVl~G~~~v~~~~~~------~k~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
.+|.....|+| ....++++|++|++.--+++-. |+.....|.+ +..++||+|..|.+.+.++. ++++..
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 135 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYK 135 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEe
Confidence 37878899999 6678999999999754444321 4666788876 58899999999999999877 666555
Q ss_pred Ec
Q 048761 173 FN 174 (221)
Q Consensus 173 ~s 174 (221)
.+
T Consensus 136 ~s 137 (184)
T 2ixk_A 136 TT 137 (184)
T ss_dssp ES
T ss_pred CC
Confidence 44
No 136
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.70 E-value=0.011 Score=45.26 Aligned_cols=70 Identities=20% Similarity=0.147 Sum_probs=53.3
Q ss_pred CCCcCCCc----cCCCCcEEEEEEeCcEEEEEEeCCCc---eEEEEecCCcEEEEcCCCeEEEEecCCCCEEE-EEEEc
Q 048761 104 VGAINPPH----FHPRATEIAYVVQGSVYSGFVDSSSR---VFARVIKQGEVMVFPRGLMHFQMNVGDEPATI-FGSFN 174 (221)
Q Consensus 104 pgg~~ppH----~Hp~a~E~~yVl~G~~~v~~~~~~~k---~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~-l~v~s 174 (221)
|++..+.| +|++.-+.+.|++|++.+.+.+++|. .....+.+|+..++|++..|.+.-..+ ++.+ +..+.
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f~leFyc 100 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYFNIDFFV 100 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEEEEEEEE
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEEEEEEEe
Confidence 56677889 59888899999999999886555443 234678999999999999999997555 4555 43333
No 137
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.67 E-value=0.0042 Score=50.65 Aligned_cols=65 Identities=18% Similarity=0.320 Sum_probs=49.0
Q ss_pred EEEecCC-CcCCCccCCCCcEEEEEEeCcEEEEEEeCCC----------------------------------ceEEEEe
Q 048761 99 RADLRVG-AINPPHFHPRATEIAYVVQGSVYSGFVDSSS----------------------------------RVFARVI 143 (221)
Q Consensus 99 rv~l~pg-g~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~----------------------------------k~~~~~L 143 (221)
.+-+.++ +..++|+.+ ..-++.+++|+=++.+..+.. +.+..+|
T Consensus 127 ~~wiG~~gs~t~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 205 (235)
T 4gjz_A 127 NAWFGPQGTISPLHQDP-QQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCIL 205 (235)
T ss_dssp EEEEECTTCEEEEECCS-SEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEE
T ss_pred EEEEeCCCCCceeeecc-ccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEE
Confidence 3445554 456788877 467888999998888864321 1235789
Q ss_pred cCCcEEEEcCCCeEEEEecCC
Q 048761 144 KQGEVMVFPRGLMHFQMNVGD 164 (221)
Q Consensus 144 ~~GDv~~~P~G~~H~~~N~g~ 164 (221)
++||++++|+|..|...|.+.
T Consensus 206 ~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 206 SPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp CTTCEEEECTTCEEEEEESSS
T ss_pred CCCCEEEeCCCCcEEEEECCC
Confidence 999999999999999999864
No 138
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.49 E-value=0.027 Score=45.71 Aligned_cols=71 Identities=14% Similarity=0.212 Sum_probs=53.6
Q ss_pred cCCCcCCCccCC---CCcEEEEEEeCcEEEEEEeCC------CceEEEEecC--CcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 103 RVGAINPPHFHP---RATEIAYVVQGSVYSGFVDSS------SRVFARVIKQ--GEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 103 ~pgg~~ppH~Hp---~a~E~~yVl~G~~~v~~~~~~------~k~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
.+|.....|+|. ...++++|++|++.--+++-. |+.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFLY 133 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 367788999995 578999999999754444421 4566788876 58899999999999999876 55554
Q ss_pred EEc
Q 048761 172 SFN 174 (221)
Q Consensus 172 v~s 174 (221)
..+
T Consensus 134 ~~s 136 (183)
T 1dzr_A 134 KAT 136 (183)
T ss_dssp EES
T ss_pred EcC
Confidence 444
No 139
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.49 E-value=0.035 Score=45.85 Aligned_cols=71 Identities=14% Similarity=0.269 Sum_probs=53.8
Q ss_pred cCCCcCCCccCCC---CcEEEEEEeCcEEEEEEeCC------CceEEEEecC--CcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 103 RVGAINPPHFHPR---ATEIAYVVQGSVYSGFVDSS------SRVFARVIKQ--GEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 103 ~pgg~~ppH~Hp~---a~E~~yVl~G~~~v~~~~~~------~k~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
.+|.....|+|.. ..++++|++|++.--+++-. |+.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEEE
Confidence 4677788999954 58999999999754445421 4566788877 47899999999999999877 55554
Q ss_pred EEc
Q 048761 172 SFN 174 (221)
Q Consensus 172 v~s 174 (221)
..+
T Consensus 134 ~~s 136 (205)
T 1oi6_A 134 MLS 136 (205)
T ss_dssp EES
T ss_pred ecC
Confidence 444
No 140
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.43 E-value=0.017 Score=47.75 Aligned_cols=71 Identities=20% Similarity=0.341 Sum_probs=54.4
Q ss_pred cCCCcCCCccCC---CCcEEEEEEeCcEEEEEEeC------CCceEEEEecC--CcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 103 RVGAINPPHFHP---RATEIAYVVQGSVYSGFVDS------SSRVFARVIKQ--GEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 103 ~pgg~~ppH~Hp---~a~E~~yVl~G~~~v~~~~~------~~k~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
.+|....+|+|. ...++++|++|++.--++|- .|+.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a~~~Y 156 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-TIVMY 156 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-EEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-EEEEE
Confidence 578888999994 36899999999975555542 15667788886 78999999999999999875 55544
Q ss_pred EEc
Q 048761 172 SFN 174 (221)
Q Consensus 172 v~s 174 (221)
..+
T Consensus 157 ~~s 159 (205)
T 3ryk_A 157 KVD 159 (205)
T ss_dssp EES
T ss_pred EcC
Confidence 444
No 141
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.35 E-value=0.034 Score=46.36 Aligned_cols=71 Identities=20% Similarity=0.190 Sum_probs=53.3
Q ss_pred cCCCcCCCccCCC---CcEEEEEEeCcEEEEEEeC------CCceEEEEecCC--cEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 103 RVGAINPPHFHPR---ATEIAYVVQGSVYSGFVDS------SSRVFARVIKQG--EVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 103 ~pgg~~ppH~Hp~---a~E~~yVl~G~~~v~~~~~------~~k~~~~~L~~G--Dv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
.+|.....|+|.. ..++++|++|++.--+++- .|+.....|.+. ..++||+|..|.+.+.++. ++++.
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEEE
Confidence 4677789999964 5899999999975444432 145667888875 7899999999999999877 55544
Q ss_pred EEc
Q 048761 172 SFN 174 (221)
Q Consensus 172 v~s 174 (221)
..+
T Consensus 142 ~~s 144 (216)
T 2c0z_A 142 LSS 144 (216)
T ss_dssp EES
T ss_pred ecC
Confidence 444
No 142
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=96.34 E-value=0.027 Score=46.22 Aligned_cols=71 Identities=18% Similarity=0.301 Sum_probs=53.4
Q ss_pred cCCCcCCCccCCC---CcEEEEEEeCcEEEEEEeCC------CceEEEEecC--CcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 103 RVGAINPPHFHPR---ATEIAYVVQGSVYSGFVDSS------SRVFARVIKQ--GEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 103 ~pgg~~ppH~Hp~---a~E~~yVl~G~~~v~~~~~~------~k~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
.+|.....|+|.. ..++++|++|++..-++|-. |+.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~ly 151 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVIYF 151 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEEEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 4677789999964 58999999999954444421 4567788886 68999999999999999874 55544
Q ss_pred EEc
Q 048761 172 SFN 174 (221)
Q Consensus 172 v~s 174 (221)
..+
T Consensus 152 ~~s 154 (196)
T 1wlt_A 152 ITH 154 (196)
T ss_dssp EES
T ss_pred EeC
Confidence 434
No 143
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.28 E-value=0.05 Score=45.60 Aligned_cols=71 Identities=21% Similarity=0.286 Sum_probs=53.3
Q ss_pred cCCCcCCCccCCC---CcEEEEEEeCcEEEEEEeC------CCceEEEEecCC--cEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 103 RVGAINPPHFHPR---ATEIAYVVQGSVYSGFVDS------SSRVFARVIKQG--EVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 103 ~pgg~~ppH~Hp~---a~E~~yVl~G~~~v~~~~~------~~k~~~~~L~~G--Dv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
.+|.....|+|.. ..++++|++|++.--+++- .|+.....|.+. ..++||+|..|.+.+.++. ++++.
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~vly 152 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-STVMY 152 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS-EEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC-EEEEE
Confidence 4677788999953 5899999999975444442 145667888774 7899999999999999877 55554
Q ss_pred EEc
Q 048761 172 SFN 174 (221)
Q Consensus 172 v~s 174 (221)
..+
T Consensus 153 ~~s 155 (225)
T 1upi_A 153 LCS 155 (225)
T ss_dssp EES
T ss_pred ecC
Confidence 444
No 144
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.27 E-value=0.017 Score=51.16 Aligned_cols=74 Identities=12% Similarity=0.206 Sum_probs=54.9
Q ss_pred EEecC-CCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-----------------------------------ceEEEEe
Q 048761 100 ADLRV-GAINPPHFHPRATEIAYVVQGSVYSGFVDSSS-----------------------------------RVFARVI 143 (221)
Q Consensus 100 v~l~p-gg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~-----------------------------------k~~~~~L 143 (221)
+-+.+ |+..++|+.+. .-+..+++|+=++.+..+.. +.+..+|
T Consensus 187 l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 45554 45678999874 77888999998877754320 3467899
Q ss_pred cCCcEEEEcCCCeEEEEecCC-CCEEEEEEEc
Q 048761 144 KQGEVMVFPRGLMHFQMNVGD-EPATIFGSFN 174 (221)
Q Consensus 144 ~~GDv~~~P~G~~H~~~N~g~-~~a~~l~v~s 174 (221)
++||++++|+|..|...|.++ ...+.+....
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w~ 297 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNFWY 297 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEEEc
Confidence 999999999999999999873 4455555444
No 145
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=95.80 E-value=0.11 Score=47.80 Aligned_cols=105 Identities=8% Similarity=0.008 Sum_probs=64.8
Q ss_pred CCCeEEecCCCCC----CcCCCCeEEEEecCCCCCCccccceEEEEEEecCCCc-CCCccCCCCcEEEEEEeCcEEEEEE
Q 048761 58 TDDFVFSGLKSAG----NFSDTGLATIPVNPTVFPGINTLGMSFVRADLRVGAI-NPPHFHPRATEIAYVVQGSVYSGFV 132 (221)
Q Consensus 58 ~~df~~~~l~~~~----~~~~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~-~ppH~Hp~a~E~~yVl~G~~~v~~~ 132 (221)
++...|..+..|. .+...-+..+.+. ...|..+. |+.+-...... .+ ...-.+.+++|++++-+|++.+...
T Consensus 118 p~qLrw~p~~ip~~~~~~~Dfv~Gl~tl~g-ngD~~~~~-G~aI~~y~~n~-sM~~~~f~NaDGD~Livpq~G~l~i~TE 194 (471)
T 1eyb_A 118 PNQLRWKPFEIPKASQKKVDFVSGLHTLCG-AGDIKSNN-GLAIHIFLCNT-SMENRCFYNSDGDFLIVPQKGNLLIYTE 194 (471)
T ss_dssp CSCEEECSCCCCCTTTCCCCTTTTEEEEEE-ESCGGGTC-CEEEEEEEECS-CCCSEEEEESSEEEEEEEEESCEEEEET
T ss_pred ccccccCCCCCCccccCCCCcccchhheec-cCCccccc-ceEEEEEeCCC-CcccceeecCCCCEEEEEEeCCEEEEEe
Confidence 5566677655443 2222233334443 34443332 44443322222 23 3345567899999999999997653
Q ss_pred eCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 133 DSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 133 ~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
-|+ ..+++||+++||+|+.+.+.-.+ +++.+++
T Consensus 195 --fG~---L~v~pgei~VIPRGi~frv~l~~--p~Rgyi~ 227 (471)
T 1eyb_A 195 --FGK---MLVQPNEICVIQRGMRFSIDVFE--ETRGYIL 227 (471)
T ss_dssp --TEE---EEECTTEEEEECTTCCEEEECSS--SEEEEEE
T ss_pred --ccc---EEeccCCEEEECCccEEEEeeCC--CceEEEE
Confidence 477 68999999999999999987655 6655544
No 146
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=95.74 E-value=0.11 Score=42.76 Aligned_cols=71 Identities=17% Similarity=0.177 Sum_probs=54.9
Q ss_pred cCCCcCCCccCC---CCcEEEEEEeCcEEEEEEeC------CCceEEEEecC--CcEEEEcCCCeEEEEecCCCCEEEEE
Q 048761 103 RVGAINPPHFHP---RATEIAYVVQGSVYSGFVDS------SSRVFARVIKQ--GEVMVFPRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 103 ~pgg~~ppH~Hp---~a~E~~yVl~G~~~v~~~~~------~~k~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 171 (221)
.+|.+..+|+|. ....+++|++|++.--++|- .|+.....|.+ +..++||+|..|.+.+.++. +.++.
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~-a~~~Y 130 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD-ATLVF 130 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC-eEEEE
Confidence 577778899984 47899999999987666652 25667788886 78999999999999998876 44444
Q ss_pred EEc
Q 048761 172 SFN 174 (221)
Q Consensus 172 v~s 174 (221)
..+
T Consensus 131 ~~t 133 (201)
T 4hn1_A 131 LCS 133 (201)
T ss_dssp EES
T ss_pred eCC
Confidence 444
No 147
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=95.73 E-value=0.068 Score=45.79 Aligned_cols=73 Identities=22% Similarity=0.224 Sum_probs=59.2
Q ss_pred ccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEE-EEecCCCCEEEE
Q 048761 92 TLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHF-QMNVGDEPATIF 170 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~-~~N~g~~~a~~l 170 (221)
.-|-+-.++.++|+.-.|+-.|.--.| +||++|++.++ . ..|.+|...++|+|+.-- +.-.|++++.+|
T Consensus 88 d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G------~---~~l~~h~Y~f~PaGV~~~~~kv~~~~g~~iL 157 (303)
T 2qdr_A 88 DSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG------E---WQLNKHSYSFIPAGVRIGSWKVLGGEEAEIL 157 (303)
T ss_dssp TTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET------T---EEECTTEEEEECTTCCBCCEEEETTSCEEEE
T ss_pred CCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC------C---EEecCCceEEecCCCccCceeecCCCCcEEE
Confidence 347889999999999999877765567 99999999754 3 689999999999998544 455688899998
Q ss_pred EEEc
Q 048761 171 GSFN 174 (221)
Q Consensus 171 ~v~s 174 (221)
..-+
T Consensus 158 ~fe~ 161 (303)
T 2qdr_A 158 WMEN 161 (303)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7733
No 148
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.73 E-value=0.086 Score=48.29 Aligned_cols=63 Identities=19% Similarity=0.357 Sum_probs=48.0
Q ss_pred EEecCCC-c-CCCccCCCCcEEEEEEeCcEEEEEEeCCC----------------ceEEEEecCCcEEEEcCCCeEEEEe
Q 048761 100 ADLRVGA-I-NPPHFHPRATEIAYVVQGSVYSGFVDSSS----------------RVFARVIKQGEVMVFPRGLMHFQMN 161 (221)
Q Consensus 100 v~l~pgg-~-~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~----------------k~~~~~L~~GDv~~~P~G~~H~~~N 161 (221)
+-+.|+| . .++|+-. .+-++..++|+=++.+..+.. ..+..+|++||++++|+|..|+..+
T Consensus 143 ~y~~~~g~~g~~~H~D~-~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s 221 (442)
T 2xdv_A 143 VYITPAGSQGLPPHYDD-VEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADT 221 (442)
T ss_dssp EEEECTTCBCSCSEECS-SEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEEC
T ss_pred eEECCCCCCCccceECC-cceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEe
Confidence 3445554 4 3799976 577888889998888765531 1246899999999999999999998
Q ss_pred cC
Q 048761 162 VG 163 (221)
Q Consensus 162 ~g 163 (221)
.+
T Consensus 222 ~~ 223 (442)
T 2xdv_A 222 PA 223 (442)
T ss_dssp CS
T ss_pred cC
Confidence 75
No 149
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.63 E-value=0.038 Score=48.60 Aligned_cols=71 Identities=13% Similarity=0.141 Sum_probs=51.7
Q ss_pred EEEecC-CCcCCCccCCCCcEEEEEEeCcEEEEEEeCC------------------------------CceEEEEecCCc
Q 048761 99 RADLRV-GAINPPHFHPRATEIAYVVQGSVYSGFVDSS------------------------------SRVFARVIKQGE 147 (221)
Q Consensus 99 rv~l~p-gg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~------------------------------~k~~~~~L~~GD 147 (221)
.+-+.+ |+..++|+.+ ..-++..+.|+=++.+..+. -+.+..+|++||
T Consensus 170 ~l~~g~~g~~~~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD 248 (338)
T 3al5_A 170 VFRISSPGLQLWTHYDV-MDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGD 248 (338)
T ss_dssp EEEEECTTCEEEEECCS-SEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTC
T ss_pred eeEECCCCCCccceECC-cccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCC
Confidence 344444 4556889987 46777889999888776431 014678999999
Q ss_pred EEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 148 VMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 148 v~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
++++|+|..|...|.+ ..+.+.+
T Consensus 249 ~LyiP~gWwH~v~~l~--~sisvn~ 271 (338)
T 3al5_A 249 VLFIPALWFHNVISEE--FGVGVNI 271 (338)
T ss_dssp EEEECTTCEEEEEESS--CEEEEEE
T ss_pred EEEECCCCeEEEeeCC--CEEEEEE
Confidence 9999999999999985 3444543
No 150
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=95.54 E-value=0.11 Score=44.75 Aligned_cols=93 Identities=15% Similarity=0.167 Sum_probs=64.7
Q ss_pred CCCeEEEEecCCCCCCccccc--eEEEEEEecCCCcCCCccCCCCcE-EEEEEeCcEEEEEEeCCCceEEEEecCCcEEE
Q 048761 74 DTGLATIPVNPTVFPGINTLG--MSFVRADLRVGAINPPHFHPRATE-IAYVVQGSVYSGFVDSSSRVFARVIKQGEVMV 150 (221)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~g--~s~~rv~l~pgg~~ppH~Hp~a~E-~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~ 150 (221)
..|..++.+.. .+.+...| +.+.. ...++.-+++|-|.+ .| +.||++|+++- .|+.|. ...+++||+=.
T Consensus 19 G~g~~v~R~~~--~~~~~~~gpf~~ld~-~~~~~~gf~~HPHrg-~EtVTyvl~G~~~H--~DS~Gn--~~~i~~GdvQw 90 (277)
T 2p17_A 19 SPIHRSGSVLE--PGNWQEYDPFLLLME-DIFERGTFDVHPHRG-IETVTYVISGELEH--FDSKAG--HSTLGPGDVQW 90 (277)
T ss_dssp ETTEEEEEEEC--SSCHHHHTTEEEEEE-EEECTTCCCCEEECS-EEEEEEEEESCEEE--EETTTE--EEEECTTCEEE
T ss_pred CCCeEEeecCC--cccccccCCEEEEec-CCCCCCCCCCCCCCC-cEEEEEEEEeEEEE--eeCCCC--ceEECCCeEEE
Confidence 44555555542 22222222 34445 667888899999974 56 88999999874 455555 38999999988
Q ss_pred EcC--CCeEEEEecCCCCEEEEEEEc
Q 048761 151 FPR--GLMHFQMNVGDEPATIFGSFN 174 (221)
Q Consensus 151 ~P~--G~~H~~~N~g~~~a~~l~v~s 174 (221)
+-+ |+.|.-.|..++++..+-++-
T Consensus 91 MtAG~GI~HsE~~~~~~~~~~lQlWv 116 (277)
T 2p17_A 91 MTAGRGVVHKEDPASGSTVHSLQLWV 116 (277)
T ss_dssp EECTTCEEEEEEECTTCCEEEEEEEE
T ss_pred EeCCCCEEEEeecCCCCCEEEEEEEe
Confidence 876 579999998777888776663
No 151
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.53 E-value=0.11 Score=48.12 Aligned_cols=75 Identities=16% Similarity=0.259 Sum_probs=53.7
Q ss_pred EEEecCCCc--CCCccCCCCcEEEEEEeCcEEEEEEeCCC--------------------ceEEEEecCCcEEEEcCCCe
Q 048761 99 RADLRVGAI--NPPHFHPRATEIAYVVQGSVYSGFVDSSS--------------------RVFARVIKQGEVMVFPRGLM 156 (221)
Q Consensus 99 rv~l~pgg~--~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~--------------------k~~~~~L~~GDv~~~P~G~~ 156 (221)
.+-+.|+|. .++|+-+ .+-++.-++|+=+..+..+.. .....+|++||++++|+|.+
T Consensus 167 N~Y~tp~Gs~g~~pH~D~-~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~ 245 (489)
T 4diq_A 167 NVYLTPPNSQGFAPHYDD-IEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFI 245 (489)
T ss_dssp EEEEECSSBCCSCCBCCS-SEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCE
T ss_pred eEEecCCCcccccCccCC-cceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCc
Confidence 345555553 5899987 466777888888888765421 11368999999999999999
Q ss_pred EEEEecCCCCEEEEEEEc
Q 048761 157 HFQMNVGDEPATIFGSFN 174 (221)
Q Consensus 157 H~~~N~g~~~a~~l~v~s 174 (221)
|+..+.+++...-+.+-.
T Consensus 246 H~~~s~~~~~SlhlTi~~ 263 (489)
T 4diq_A 246 HQAECQDGVHSLHLTLST 263 (489)
T ss_dssp EEEEBCSSCCEEEEEEEE
T ss_pred eEEEecCCCceEEEeecc
Confidence 999998765554444433
No 152
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=95.42 E-value=0.022 Score=49.46 Aligned_cols=71 Identities=17% Similarity=0.163 Sum_probs=48.5
Q ss_pred eEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC---------CceEEEEecCCcEEEEcCCCeEEEEecCCC
Q 048761 95 MSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS---------SRVFARVIKQGEVMVFPRGLMHFQMNVGDE 165 (221)
Q Consensus 95 ~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~---------~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~ 165 (221)
+..+|+.+.||+.+.||.=+ -|+....+|..++.+.-.. |+ .+.+++|+++++....+|+..|.|++
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~--~~~m~~GE~w~~d~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDT--VIHMRPGEIWFLDAATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTE--EECCCTTEEEECCTTSCEEEEESSSS
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCE--EEecCCCCEEEEcCCCeeEEEcCCCC
Confidence 47888899999999999654 2444344666555543211 33 48999999999999999999999875
Q ss_pred CEEE
Q 048761 166 PATI 169 (221)
Q Consensus 166 ~a~~ 169 (221)
+-+.
T Consensus 167 ~RIh 170 (290)
T 1e5r_A 167 SRQS 170 (290)
T ss_dssp CCCE
T ss_pred CeEE
Confidence 4333
No 153
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=95.38 E-value=0.14 Score=44.30 Aligned_cols=93 Identities=20% Similarity=0.278 Sum_probs=66.6
Q ss_pred CCeEEEEecCCCCCCccccc--eEEEEEEecCCCcCCCccCCCCcE-EEEEE-eCcEEEEEEeCCCceEEEEecCCcEEE
Q 048761 75 TGLATIPVNPTVFPGINTLG--MSFVRADLRVGAINPPHFHPRATE-IAYVV-QGSVYSGFVDSSSRVFARVIKQGEVMV 150 (221)
Q Consensus 75 ~g~~v~~~~~~~~P~l~~~g--~s~~rv~l~pgg~~ppH~Hp~a~E-~~yVl-~G~~~v~~~~~~~k~~~~~L~~GDv~~ 150 (221)
.|..|+.+. ..|.....| +.+....+.|+.-+++|-|. ..| +.||+ +|+++-. |+.|. ...+++||+-.
T Consensus 20 ~G~~v~R~~--~~~~~~~~gpf~~ld~~~~~~~~Gf~~HPHr-g~EtVTyvl~~G~~~H~--DS~Gn--~~~i~~GdvQw 92 (290)
T 1j1l_A 20 VGARVRRSI--GRPELKNLDPFLLFDEFKGGRPGGFPDHPHR-GFETVSYLLEGGSMAHE--DFCGH--TGKMNPGDLQW 92 (290)
T ss_dssp BTEEEEECT--TSTTCCCCTTEEEEEEEEECTTCBEEEEEEB-SEEEEEEECSSSCEEEE--ETTSC--EEEECTTCEEE
T ss_pred CCeEEEEeC--CCccccccCcEEEEEccccCCCCCCCCCCCC-CeEEEEEECcceEEEEe--eCCCC--ceEECCCcEEE
Confidence 345665554 344444333 45556678888778999996 566 78999 9998744 55555 38999999988
Q ss_pred EcC--CCeEEEEecCCCCEEEEEEEc
Q 048761 151 FPR--GLMHFQMNVGDEPATIFGSFN 174 (221)
Q Consensus 151 ~P~--G~~H~~~N~g~~~a~~l~v~s 174 (221)
+-+ |+.|.-.|..++++..+-+.-
T Consensus 93 MtAG~GI~HsE~~~~~~~~~~lQlWv 118 (290)
T 1j1l_A 93 MTAGRGILHAEMPCSEEPAHGLQLWV 118 (290)
T ss_dssp EECTTCEEEEEEECSSSCEEEEEEEE
T ss_pred EeCCCCEEEEeEcCCCCCEEEEEEEe
Confidence 875 579999998777888877663
No 154
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=95.04 E-value=0.17 Score=43.44 Aligned_cols=83 Identities=14% Similarity=0.163 Sum_probs=56.1
Q ss_pred ccceEEEEEEecCCCc---CCCccCCCC--c------EEEEE-Ee---CcEEEEEEeCCC-ceEEEEecCCcEEEEcCCC
Q 048761 92 TLGMSFVRADLRVGAI---NPPHFHPRA--T------EIAYV-VQ---GSVYSGFVDSSS-RVFARVIKQGEVMVFPRGL 155 (221)
Q Consensus 92 ~~g~s~~rv~l~pgg~---~ppH~Hp~a--~------E~~yV-l~---G~~~v~~~~~~~-k~~~~~L~~GDv~~~P~G~ 155 (221)
.-.+-+..+ +.|||. .|||.|.+. . |+.|- +. |-+.-.+-++++ -.....++-||++.+|+|.
T Consensus 150 a~~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy 228 (270)
T 2qjv_A 150 ADSLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY 228 (270)
T ss_dssp CSSCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB
T ss_pred cceEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc
Confidence 335666666 777764 499999854 3 88865 43 444333322222 1235999999999999999
Q ss_pred eEEEEecCCCCEEEEEEEcCC
Q 048761 156 MHFQMNVGDEPATIFGSFNSQ 176 (221)
Q Consensus 156 ~H~~~N~g~~~a~~l~v~ss~ 176 (221)
|-........+.+|.++...
T Consensus 229 -Hp~~a~pGy~~YylwvMaG~ 248 (270)
T 2qjv_A 229 -HPVATIAGYDNYYLNVMAGP 248 (270)
T ss_dssp -CCEEECTTCEEEEEEEEECS
T ss_pred -CCCcCCCCcccEEEEEEECC
Confidence 99776655677788888863
No 155
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=94.93 E-value=0.095 Score=46.28 Aligned_cols=67 Identities=22% Similarity=0.262 Sum_probs=46.7
Q ss_pred EecC-CCcCCCccCCCCc-EEEEEEeCcEEEEEEeCCC---------------------------------------ceE
Q 048761 101 DLRV-GAINPPHFHPRAT-EIAYVVQGSVYSGFVDSSS---------------------------------------RVF 139 (221)
Q Consensus 101 ~l~p-gg~~ppH~Hp~a~-E~~yVl~G~~~v~~~~~~~---------------------------------------k~~ 139 (221)
-+.+ |...+.|+++..+ -+..++.|+=++.+..+.. +.+
T Consensus 177 ~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~~ 256 (336)
T 3k2o_A 177 VMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPL 256 (336)
T ss_dssp EEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCCE
T ss_pred EECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCceE
Confidence 3444 3456778877432 4777888876666654320 124
Q ss_pred EEEecCCcEEEEcCCCeEEEEecCCCCE
Q 048761 140 ARVIKQGEVMVFPRGLMHFQMNVGDEPA 167 (221)
Q Consensus 140 ~~~L~~GDv~~~P~G~~H~~~N~g~~~a 167 (221)
...+++||++++|+|..|+..|.++.-+
T Consensus 257 ~~~l~pGd~l~iP~gw~H~v~~~~~sis 284 (336)
T 3k2o_A 257 EILQKPGETVFVPGGWWHVVLNLDTTIA 284 (336)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSCEEE
T ss_pred EEEECCCCEEEeCCCCcEEEecCCCeEE
Confidence 6789999999999999999999876433
No 156
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=94.77 E-value=0.087 Score=45.49 Aligned_cols=56 Identities=9% Similarity=0.031 Sum_probs=42.2
Q ss_pred ecCCCcC-CCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCC
Q 048761 102 LRVGAIN-PPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDE 165 (221)
Q Consensus 102 l~pgg~~-ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~ 165 (221)
+.+|... ..-. .+-+++++||+..|.+. ++ .+.|++||++.||+|..|.+....+.
T Consensus 214 ~G~Ges~~~~~~---~d~wiWqLEGss~Vt~~---~q--~~~L~~~DsLLIpa~~~y~~~r~~gs 270 (286)
T 2qnk_A 214 YGQGSSEGLRQN---VDVWLWQLEGSSVVTMG---GR--RLSLAPDDSLLVLAGTSYAWERTQGS 270 (286)
T ss_dssp ECSEEEEECCCS---SCEEEEEEESCEEEEET---TE--EEEECTTEEEEECTTCCEEEEECTTC
T ss_pred EcCCccccccCc---CcEEEEEEcCceEEEEC---Ce--EEeccCCCEEEecCCCeEEEEecCCe
Confidence 6666442 2222 26799999999988875 55 49999999999999999998764433
No 157
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=94.70 E-value=0.79 Score=38.18 Aligned_cols=155 Identities=12% Similarity=0.042 Sum_probs=94.1
Q ss_pred cccCCCCCCCCCCeEEecCCCCCCcC-CCCeEEEEecCCCCC------CccccceEEEEEEecCCCcCCCccCCCCcEEE
Q 048761 48 LPCKNSSEATTDDFVFSGLKSAGNFS-DTGLATIPVNPTVFP------GINTLGMSFVRADLRVGAINPPHFHPRATEIA 120 (221)
Q Consensus 48 ~~ck~~~~vt~~df~~~~l~~~~~~~-~~g~~v~~~~~~~~P------~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~ 120 (221)
.|...+...|+++++=.. .- .. |.|+..++.+.+..- +-+ ...+..+.-+.+|....+|.- +++|++
T Consensus 11 ~~~~~~~~~ta~~lI~~L-~L---~PHPEGG~yrEt~Rs~~~v~~~~~~~R-~~~TaIYfLL~~g~~S~~HRv-~sdEiW 84 (225)
T 3m3i_A 11 SPALAPPQNTAEFWIKRL-QL---VPHPEGGYYSEVVRSAHKVDNEEGNRR-HAYTTIYFLCTPESPSHLHRL-CSDETW 84 (225)
T ss_dssp -------CCCHHHHHHHT-TC---EECTTSSEEEEEEECSSEEECTTSCEE-ESCEEEEEEECSSSCEEEEEC-SSEEEE
T ss_pred CcccCCCCCCHHHHHHHC-CC---ccCCCCceEEEEEECCCcccCCCCCCc-ccceeEEEEecCCCCcccEEe-cCCEEE
Confidence 455555566666654331 11 12 788888888765431 111 235677777888886666654 589999
Q ss_pred EEEeCc-EEEEEEeCCC----------------------------ceEEEEe----cCCcE--EEEcCCCeEEEEecCCC
Q 048761 121 YVVQGS-VYSGFVDSSS----------------------------RVFARVI----KQGEV--MVFPRGLMHFQMNVGDE 165 (221)
Q Consensus 121 yVl~G~-~~v~~~~~~~----------------------------k~~~~~L----~~GDv--~~~P~G~~H~~~N~g~~ 165 (221)
+-..|. +++.+..++| +.....| .+|+. ++||+|.....+..+++
T Consensus 85 ~~h~G~pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~ 164 (225)
T 3m3i_A 85 MYHAGDPLQLHVILKDPQDEDRIAAQPPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADG 164 (225)
T ss_dssp EEEEESCEEEEEEESSSTTTTC------------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSS
T ss_pred EEECCCCEEEEEEcCCCcccccccccccccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCC
Confidence 999997 6788877666 3334555 44664 79999987777655542
Q ss_pred -----CEEEEEEEcCCCCCceecccchhcCCCCHHHHHHHhCCCHHHHHHhhhc
Q 048761 166 -----PATIFGSFNSQNPGNQKIPSAIFGSGIDVELLEKAFGLSPKQIGTMRRR 214 (221)
Q Consensus 166 -----~a~~l~v~ss~~pg~~~~~~~lf~~~~p~evla~af~~~~~~v~~l~~~ 214 (221)
.-.++...- .||+..-...+ ++.+-|.+-|---++.|++|-..
T Consensus 165 ~~~~~~~sLVsCtV--aPGFdF~DFel----~~~~~L~~~~P~~~~~I~~lt~~ 212 (225)
T 3m3i_A 165 ADGQAGYSLVSCIV--SPGFDYRDFEI----FTQAQLMELYPQHEAVIKQMAYE 212 (225)
T ss_dssp TTCSSSCEEEEEEE--ESCCCGGGCEE----CBHHHHHHHCGGGHHHHHHHSBC
T ss_pred cCcCCCeEEEEEEE--cCCccchhcEe----cCHHHHHHHCchHHHHHHHhchh
Confidence 333333322 38887555444 45677777787777888888543
No 158
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=94.51 E-value=0.12 Score=47.58 Aligned_cols=75 Identities=21% Similarity=0.116 Sum_probs=53.5
Q ss_pred cCCCcCCCccCCCCc-EEEEEEeCcEEEEEEeCC-------------------------CceEEEEecCCcEEEEcCCCe
Q 048761 103 RVGAINPPHFHPRAT-EIAYVVQGSVYSGFVDSS-------------------------SRVFARVIKQGEVMVFPRGLM 156 (221)
Q Consensus 103 ~pgg~~ppH~Hp~a~-E~~yVl~G~~~v~~~~~~-------------------------~k~~~~~L~~GDv~~~P~G~~ 156 (221)
++|+..+.|+.+.++ -+..+++|+=++.+..+. .+.+..++++||+++||.|..
T Consensus 204 p~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGWw 283 (451)
T 2yu1_A 204 VRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGWI 283 (451)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTCE
T ss_pred cCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCce
Confidence 345667899988654 456799999888776543 123468899999999999999
Q ss_pred EEEEecCCCCEEEEEEEcCCC
Q 048761 157 HFQMNVGDEPATIFGSFNSQN 177 (221)
Q Consensus 157 H~~~N~g~~~a~~l~v~ss~~ 177 (221)
|...|..+.-++---.+++.|
T Consensus 284 H~V~nledsIait~NF~~~~n 304 (451)
T 2yu1_A 284 HAVYTPTDTLVFGGNFLHSFN 304 (451)
T ss_dssp EEEECSSCEEEEEEEECCSSS
T ss_pred EEEecCCCeEEEeeeeCCccc
Confidence 999998655433334444444
No 159
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=94.34 E-value=1.6 Score=34.88 Aligned_cols=128 Identities=15% Similarity=0.094 Sum_probs=86.7
Q ss_pred CC-CeEEEEecCCC-------CCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCc-EEEEEEeCCCceEEEEec
Q 048761 74 DT-GLATIPVNPTV-------FPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGS-VYSGFVDSSSRVFARVIK 144 (221)
Q Consensus 74 ~~-g~~v~~~~~~~-------~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~-~~v~~~~~~~k~~~~~L~ 144 (221)
|. |+..++.+... ..+-+ ...+..+.-+.+|....+|.- +++|+++-..|. +++.+..++|+.....|.
T Consensus 25 PEEGG~yrEt~rs~~~v~~~~~~~~R-~~~TaIYfLL~~~~~S~~HRv-~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG 102 (172)
T 3loi_A 25 PASGGWFRETYRSDVQVEAEGFDGKR-SVLTMIYYLMQAGQPDPFHRV-KSDETFVHNLGGSMKIHMIHPDGSYSCSILG 102 (172)
T ss_dssp TTSSSEEEEEEECSCEECCTTSSSCE-ESCEEEEEEEETTCCEEEEEC-SSEEEEEEEEESCEEEEEECTTSCEEEEEES
T ss_pred CcCCCeEEEEEECcCcccCCCCCCCc-ccceEEEEEEcCCCCccCEEe-cCCEEEEEEcCCCEEEEEEcCCCceEEEEeC
Confidence 66 77777777543 12222 235777778888886667765 489999999995 689998888876566554
Q ss_pred ----CCc---EEEEcCCCeEEEEecCCCCEEEEEEEcCCCCCceecccchhcCCCCHHHHHHHhCCCHHHHHHhh
Q 048761 145 ----QGE---VMVFPRGLMHFQMNVGDEPATIFGSFNSQNPGNQKIPSAIFGSGIDVELLEKAFGLSPKQIGTMR 212 (221)
Q Consensus 145 ----~GD---v~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~~~~~~~lf~~~~p~evla~af~~~~~~v~~l~ 212 (221)
+|+ -+++|+|.....+. + .-.++...- -||+..-...+ .+.+-|.+.|---.+.|++|-
T Consensus 103 ~d~~~Ge~~pQ~vVP~G~WqaA~~-~--~~~LVsctV--aPGF~f~dfel----~~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 103 NPLEHPEARHQVVVPRRVWFAQEV-D--GYCLASVLV--APGFDFKDFSL----GKREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp CTTTSTTCBSEEEECTTCEEEEEE-S--SEEEEEEEE--ESCCCGGGCEE----CCHHHHHHHCGGGHHHHHHTS
T ss_pred CCcccCCcceEEEECCCEEEEEEe-C--CcEEEEEEE--cCCccchhcEE----cCHHHHHHHCchHHHHHHHhc
Confidence 578 58999998777665 3 233333222 38887554444 466777777877777888774
No 160
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=94.16 E-value=0.21 Score=40.88 Aligned_cols=91 Identities=15% Similarity=0.188 Sum_probs=60.3
Q ss_pred CCCCCCccccc-eEEEEEEecCCCcCCCccCCCCcEEEE----EEeC-cEEEEEEeCCCceEEEEecCCcEEEEcCCCeE
Q 048761 84 PTVFPGINTLG-MSFVRADLRVGAINPPHFHPRATEIAY----VVQG-SVYSGFVDSSSRVFARVIKQGEVMVFPRGLMH 157 (221)
Q Consensus 84 ~~~~P~l~~~g-~s~~rv~l~pgg~~ppH~Hp~a~E~~y----Vl~G-~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H 157 (221)
..++|++.... -++....+.||+.++||..+....+-+ ++-. ...+.++ ++ .+..++|+.++|.-...|
T Consensus 90 L~~ip~~~~~~~~~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~---~~--~~~w~eGe~~~fDds~~H 164 (197)
T 3rcq_A 90 LEKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCA---NE--TKTWEEGKVLIFDDSFEH 164 (197)
T ss_dssp HTTCHHHHTCTTCEEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEET---TE--EECCCBTCEEEECTTSCE
T ss_pred HHhCcccccCCcceEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEEC---CE--EEEeeCCcEEEEcCCeEE
Confidence 35666554211 156667899999999999885433322 2222 2333332 34 489999999999999999
Q ss_pred EEEecCCCCEEEEEEEcCCCCCc
Q 048761 158 FQMNVGDEPATIFGSFNSQNPGN 180 (221)
Q Consensus 158 ~~~N~g~~~a~~l~v~ss~~pg~ 180 (221)
..+|.++++-+++ +++-..|..
T Consensus 165 ev~N~~d~~RvvL-~~D~~rPdl 186 (197)
T 3rcq_A 165 EVWQDASSFRLIF-IVDVWHPEL 186 (197)
T ss_dssp EEEECSSSCEEEE-EEEEECTTS
T ss_pred EEEECCCCCEEEE-EEeeeCCCC
Confidence 9999988765544 556555544
No 161
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=93.86 E-value=0.11 Score=48.16 Aligned_cols=63 Identities=19% Similarity=0.251 Sum_probs=47.9
Q ss_pred cCCCcCCCccCCCCc-EEEEEEeCcEEEEEEeCC-------------------------CceEEEEecCCcEEEEcCCCe
Q 048761 103 RVGAINPPHFHPRAT-EIAYVVQGSVYSGFVDSS-------------------------SRVFARVIKQGEVMVFPRGLM 156 (221)
Q Consensus 103 ~pgg~~ppH~Hp~a~-E~~yVl~G~~~v~~~~~~-------------------------~k~~~~~L~~GDv~~~P~G~~ 156 (221)
++|+..+.|.++.++ -+..+++|+=++.+..+. .+.+..++++||++++|.|..
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWw 353 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 353 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCce
Confidence 345667899988654 355788998888777552 123468999999999999999
Q ss_pred EEEEecCCC
Q 048761 157 HFQMNVGDE 165 (221)
Q Consensus 157 H~~~N~g~~ 165 (221)
|+..|..+.
T Consensus 354 H~V~nleds 362 (488)
T 3kv5_D 354 HAVLTSQDC 362 (488)
T ss_dssp EEEEEEEEE
T ss_pred EEeeCCCCe
Confidence 999998553
No 162
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=93.53 E-value=0.18 Score=46.21 Aligned_cols=63 Identities=17% Similarity=0.248 Sum_probs=47.4
Q ss_pred CCCcCCCccCCCCcE-EEEEEeCcEEEEEEeCC-------------------------CceEEEEecCCcEEEEcCCCeE
Q 048761 104 VGAINPPHFHPRATE-IAYVVQGSVYSGFVDSS-------------------------SRVFARVIKQGEVMVFPRGLMH 157 (221)
Q Consensus 104 pgg~~ppH~Hp~a~E-~~yVl~G~~~v~~~~~~-------------------------~k~~~~~L~~GDv~~~P~G~~H 157 (221)
+|+..+.|..+.++- +..+++|+=+.-+..+. .+.+..++++||++++|.|..|
T Consensus 240 ~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWwH 319 (447)
T 3kv4_A 240 RDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWIH 319 (447)
T ss_dssp TTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCEE
T ss_pred CCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCeE
Confidence 455678898876543 55789998887776542 1234689999999999999999
Q ss_pred EEEecCCCC
Q 048761 158 FQMNVGDEP 166 (221)
Q Consensus 158 ~~~N~g~~~ 166 (221)
+..|..+.-
T Consensus 320 ~V~nledsI 328 (447)
T 3kv4_A 320 AVLTPVDCL 328 (447)
T ss_dssp EEEESSCEE
T ss_pred EEecCCCEE
Confidence 999986543
No 163
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=93.40 E-value=0.27 Score=42.57 Aligned_cols=82 Identities=16% Similarity=0.153 Sum_probs=46.9
Q ss_pred ceEEEEEEecCCC-c--CCCccCCCCcEEEEEEe--C-cEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCE
Q 048761 94 GMSFVRADLRVGA-I--NPPHFHPRATEIAYVVQ--G-SVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPA 167 (221)
Q Consensus 94 g~s~~rv~l~pgg-~--~ppH~Hp~a~E~~yVl~--G-~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a 167 (221)
.+-+....+.||+ + .|||.|.+..|..|--+ . ...+++..+-++.+...++-||++++|+|-.|.. .|...-
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~v~h~~g~pdEtrh~~V~n~daVlvP~wgyHp~--~Gt~~Y 256 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRIFHMMGKPDETKHLVMSNEQAAISPSWSIHSG--VGTSNY 256 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCCEEEEESSTTSCEEEEECTTEEEEECTTSCCCE--EESSCC
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCeEEEECCCCCceEEEEEECCCEEEeCCCcccCC--CCCcCe
Confidence 4556777788886 3 49999998777776443 1 1233333333454446789999999999988963 344455
Q ss_pred EEEEEEcCCC
Q 048761 168 TIFGSFNSQN 177 (221)
Q Consensus 168 ~~l~v~ss~~ 177 (221)
.+|++...+|
T Consensus 257 ~ylwvMAG~n 266 (289)
T 1ywk_A 257 SFIWAMCGEN 266 (289)
T ss_dssp EEEEEEECC-
T ss_pred EEEEEEEcCC
Confidence 5777777654
No 164
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=93.35 E-value=0.82 Score=39.39 Aligned_cols=82 Identities=18% Similarity=0.246 Sum_probs=56.0
Q ss_pred ceEEEEEEecCCC-c--CCCccCCCCcEEEEEEe----CcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCC
Q 048761 94 GMSFVRADLRVGA-I--NPPHFHPRATEIAYVVQ----GSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEP 166 (221)
Q Consensus 94 g~s~~rv~l~pgg-~--~ppH~Hp~a~E~~yVl~----G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~ 166 (221)
.+-+....+.||+ + .|||.|.+..|..|--+ |. .+++..+.++.....++-||++.+|...+|. ..|-+.
T Consensus 179 qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gf-v~q~~g~p~Etrhi~V~n~daVlvP~wh~h~--~~G~~~ 255 (282)
T 1xru_A 179 QLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDAC-VFHMMGQPQETRHIVMHNEQAVISPSWSIHS--GVGTKA 255 (282)
T ss_dssp SCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCC-EEEEEEETTEEEEEEECSSEEEEECTTCEEE--EEESSC
T ss_pred hEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCE-EEEEeCCCCCeeEEEEECCCEEEeCCCCCCC--CCCccc
Confidence 4567777888886 3 49999998777776544 33 3444433344444577999999999656676 346666
Q ss_pred EEEEEEEcCCCC
Q 048761 167 ATIFGSFNSQNP 178 (221)
Q Consensus 167 a~~l~v~ss~~p 178 (221)
-.+|++...+|.
T Consensus 256 Y~ylwvMAG~n~ 267 (282)
T 1xru_A 256 YTFIWGMVGENQ 267 (282)
T ss_dssp CEEEEEEEESCC
T ss_pred eEEEEEEEcCCc
Confidence 778888876553
No 165
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=93.20 E-value=0.18 Score=45.56 Aligned_cols=61 Identities=20% Similarity=0.298 Sum_probs=46.6
Q ss_pred CCCcCCCccCCCCcE-EEEEEeCcEEEEEEeCC-------------------------CceEEEEecCCcEEEEcCCCeE
Q 048761 104 VGAINPPHFHPRATE-IAYVVQGSVYSGFVDSS-------------------------SRVFARVIKQGEVMVFPRGLMH 157 (221)
Q Consensus 104 pgg~~ppH~Hp~a~E-~~yVl~G~~~v~~~~~~-------------------------~k~~~~~L~~GDv~~~P~G~~H 157 (221)
+|+..+.|+.+.++- +..+++|+=+..+..+. .+.+...+++||++++|.|..|
T Consensus 184 ~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW~H 263 (397)
T 3kv9_A 184 QDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWIH 263 (397)
T ss_dssp TTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTCEE
T ss_pred CCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCCeE
Confidence 456678899886553 45788998877777542 1234689999999999999999
Q ss_pred EEEecCC
Q 048761 158 FQMNVGD 164 (221)
Q Consensus 158 ~~~N~g~ 164 (221)
+..|..+
T Consensus 264 ~V~nled 270 (397)
T 3kv9_A 264 AVLTSQD 270 (397)
T ss_dssp EEEEEEE
T ss_pred EccCCcC
Confidence 9999754
No 166
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=93.09 E-value=0.18 Score=45.23 Aligned_cols=63 Identities=17% Similarity=0.250 Sum_probs=47.1
Q ss_pred cCCCcCCCccCCCCcE-EEEEEeCcEEEEEEeCC-------------------------CceEEEEecCCcEEEEcCCCe
Q 048761 103 RVGAINPPHFHPRATE-IAYVVQGSVYSGFVDSS-------------------------SRVFARVIKQGEVMVFPRGLM 156 (221)
Q Consensus 103 ~pgg~~ppH~Hp~a~E-~~yVl~G~~~v~~~~~~-------------------------~k~~~~~L~~GDv~~~P~G~~ 156 (221)
++|+..+.|..+.++- +..+++|+=+..+..+. .+.+...+++||++++|.|..
T Consensus 155 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGWw 234 (371)
T 3k3o_A 155 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 234 (371)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCCe
Confidence 3455678898886554 45689998777776432 123578999999999999999
Q ss_pred EEEEecCCC
Q 048761 157 HFQMNVGDE 165 (221)
Q Consensus 157 H~~~N~g~~ 165 (221)
|+..|..+.
T Consensus 235 H~V~nledS 243 (371)
T 3k3o_A 235 HAVLTPVDC 243 (371)
T ss_dssp EEEEEEEEE
T ss_pred EEEecCCCe
Confidence 999997543
No 167
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=92.59 E-value=0.46 Score=34.36 Aligned_cols=53 Identities=15% Similarity=0.071 Sum_probs=40.6
Q ss_pred CCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 115 RATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 115 ~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
.+.|+.-|++|++++.+-++ .. .+++++||.|.+|++.--.++.. ++..+++.
T Consensus 40 ~~~E~M~vvsG~~~V~lpg~-~e--w~~~~aGesF~Vpans~F~l~v~--~~~~YlC~ 92 (94)
T 2oyz_A 40 QAPERMTVVKGALVVKRVGE-AD--WTTYSSGESFDVEGNSSFELQVK--DATAYLCE 92 (94)
T ss_dssp SSCEEEEEEESEEEEEETTC-SS--CEEEETTCEEEECSSEEEEEEES--SCEEEEEE
T ss_pred CCeEEEEEEEeEEEEEcCCC-Cc--CEEECCCCEEEECCCCEEEEEEc--ccEeEEEE
Confidence 37899999999999998633 23 48999999999999976666543 44555554
No 168
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=91.75 E-value=0.36 Score=39.72 Aligned_cols=78 Identities=24% Similarity=0.301 Sum_probs=47.3
Q ss_pred EEEEEEecCCCcCCCccCCCCc--EEEEEEe--CcEEEEEEeCC------------------CceEEEEecCCcEEEEcC
Q 048761 96 SFVRADLRVGAINPPHFHPRAT--EIAYVVQ--GSVYSGFVDSS------------------SRVFARVIKQGEVMVFPR 153 (221)
Q Consensus 96 s~~rv~l~pgg~~ppH~Hp~a~--E~~yVl~--G~~~v~~~~~~------------------~k~~~~~L~~GDv~~~P~ 153 (221)
..-...+++|+...+|.|+++. =++|+-. +.+.+.|.++. .......-++|++++||.
T Consensus 104 ~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS 183 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWES 183 (216)
T ss_dssp EEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEET
T ss_pred eEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECC
Confidence 3556678899999999998532 1334322 22344444431 111145678999999999
Q ss_pred CCeEEEEe-cCCCCEEEEEEEc
Q 048761 154 GLMHFQMN-VGDEPATIFGSFN 174 (221)
Q Consensus 154 G~~H~~~N-~g~~~a~~l~v~s 174 (221)
-+.|...- .++++ ++-.+|+
T Consensus 184 ~l~H~V~p~~~~~~-RiSIsFN 204 (216)
T 2rg4_A 184 WLRHEVPMNMAEED-RISVSFN 204 (216)
T ss_dssp TSCEEECCCCSSSC-EEEEEEE
T ss_pred CCEEeccCCCCCCC-EEEEEEE
Confidence 99999864 34433 3333444
No 169
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=91.38 E-value=0.79 Score=34.09 Aligned_cols=67 Identities=13% Similarity=0.192 Sum_probs=48.0
Q ss_pred EecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEE
Q 048761 101 DLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSF 173 (221)
Q Consensus 101 ~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ 173 (221)
.+.||- .|.+....+.|+.-|++|++++.+-++ .. .+.+++|+.|.+|++.--.++.. ++..+++.|
T Consensus 43 Vm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~-~e--W~~~~aGesF~VpanssF~lkv~--~~~~Y~C~y 109 (111)
T 3hqx_A 43 VILPTE-QPLTFETHVPERMEIISGECRVKIADS-TE--SELFRAGQSFYVPGNSLFKIETD--EVLDYVCHL 109 (111)
T ss_dssp EECCCS-SCEEEECSSCEEEEEEESEEEEEETTC-SS--CEEEETTCEEEECTTCEEEEECS--SCEEEEEEE
T ss_pred EEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCc-cc--CEEeCCCCEEEECCCCcEEEEEC--cceeEEEEc
Confidence 456763 223344447899999999999998643 23 48999999999999987666543 466666644
No 170
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=91.37 E-value=0.33 Score=43.76 Aligned_cols=63 Identities=16% Similarity=0.249 Sum_probs=47.3
Q ss_pred cCCCcCCCccCCCCc-EEEEEEeCcEEEEEEeCCC-------------------------ceEEEEecCCcEEEEcCCCe
Q 048761 103 RVGAINPPHFHPRAT-EIAYVVQGSVYSGFVDSSS-------------------------RVFARVIKQGEVMVFPRGLM 156 (221)
Q Consensus 103 ~pgg~~ppH~Hp~a~-E~~yVl~G~~~v~~~~~~~-------------------------k~~~~~L~~GDv~~~P~G~~ 156 (221)
++|+..+.|..+.++ -+..+++|+=+.-+..+.. +.+...+++||++++|.|..
T Consensus 182 p~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWw 261 (392)
T 3pua_A 182 VKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWI 261 (392)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCce
Confidence 345667889887654 3567899987777764321 23568999999999999999
Q ss_pred EEEEecCCC
Q 048761 157 HFQMNVGDE 165 (221)
Q Consensus 157 H~~~N~g~~ 165 (221)
|+..|..+.
T Consensus 262 H~V~nledS 270 (392)
T 3pua_A 262 YATLTPVDC 270 (392)
T ss_dssp EEEEEEEEE
T ss_pred EEEecCCCE
Confidence 999998553
No 171
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=90.90 E-value=0.33 Score=42.37 Aligned_cols=46 Identities=24% Similarity=0.347 Sum_probs=31.7
Q ss_pred CCcEEEEEEeC----cEEEEEEeCC----------Cc----eEEEEecCCcEEEEcCCCeEEEE
Q 048761 115 RATEIAYVVQG----SVYSGFVDSS----------SR----VFARVIKQGEVMVFPRGLMHFQM 160 (221)
Q Consensus 115 ~a~E~~yVl~G----~~~v~~~~~~----------~k----~~~~~L~~GDv~~~P~G~~H~~~ 160 (221)
+-.|++|+++. ++.++....+ +. .-...+++||.+++|+|.+|...
T Consensus 116 gKpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 116 GKTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp CCCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEEC
T ss_pred CCCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEec
Confidence 36899999995 3444421100 00 12489999999999999999863
No 172
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=90.34 E-value=6.5 Score=32.15 Aligned_cols=131 Identities=16% Similarity=0.137 Sum_probs=81.3
Q ss_pred CCCeEEEEecCCCC----CC--c---------cccceEEEEEEecCCC-cCCCccCCCCcEEEEEEeCcEEEEEEeCCCc
Q 048761 74 DTGLATIPVNPTVF----PG--I---------NTLGMSFVRADLRVGA-INPPHFHPRATEIAYVVQGSVYSGFVDSSSR 137 (221)
Q Consensus 74 ~~g~~v~~~~~~~~----P~--l---------~~~g~s~~rv~l~pgg-~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k 137 (221)
|.|+..++.+.... +. + ...-.+..+.-+.++. ...+|.- +++|+++-..|.....+..++++
T Consensus 43 PEGG~yrET~Rs~~~~~~~~~~~~~~~~~~~~~R~~~TaIYfLL~~~~~~S~wHRv-~sdEiW~~h~G~p~~~li~~dg~ 121 (203)
T 1xe7_A 43 REGGYFKETDRSPYTMEVEKPVNGGSGNTEMVTRNQSTLIYYLLTPDSPIGKFHKN-INRIIHILQRGKGQYVLVYPDGQ 121 (203)
T ss_dssp TTSSEEEEEEECSCEEEECCCC--------CEEEESCEEEEEEEBTTBCEEEEEEE-SSCEEEEEEEECEEEEEECTTSC
T ss_pred CCCceEEEEEecccccccCccccccccccCCCCccceeEEEEEEcCCCCcccceee-CCCEEEEEEcCCccEEEEcCCCC
Confidence 78888888775432 11 0 1112466667788886 5777776 48999999999665556777776
Q ss_pred eEEEEecC----CcE--EEEcCCCeEEEEec-CCCCE--EEEEEEcCCCCCceecccchhcCCCCHH-HHHHHhCCCHHH
Q 048761 138 VFARVIKQ----GEV--MVFPRGLMHFQMNV-GDEPA--TIFGSFNSQNPGNQKIPSAIFGSGIDVE-LLEKAFGLSPKQ 207 (221)
Q Consensus 138 ~~~~~L~~----GDv--~~~P~G~~H~~~N~-g~~~a--~~l~v~ss~~pg~~~~~~~lf~~~~p~e-vla~af~~~~~~ 207 (221)
..+..|.+ |+. +++|+|.....+.. +++-. .++...- -||+..-...+ .+.+ -|.+-|. .+.
T Consensus 122 ~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~~~~~tLVgCtV--aPGFdF~dFel----~~~~~~L~~~~P--~~~ 193 (203)
T 1xe7_A 122 VKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEFDNGFLISEVV--VPGFDFEDHTF----LKGEDELKHLVG--PEK 193 (203)
T ss_dssp EEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTTTTCEEEEEEE--SSCCCGGGEEE----CCHHHHHHHHHC--HHH
T ss_pred EEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCCcccceEEEEEe--cCCccchhcEe----cCCcHHHHHHCC--HHH
Confidence 55555543 554 89999987776654 22221 3333322 38887555444 3455 5555564 677
Q ss_pred HHHhhh
Q 048761 208 IGTMRR 213 (221)
Q Consensus 208 v~~l~~ 213 (221)
++.|+-
T Consensus 194 ~~~l~~ 199 (203)
T 1xe7_A 194 AAELAF 199 (203)
T ss_dssp HHHTGG
T ss_pred HHHHHH
Confidence 777653
No 173
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=90.31 E-value=5.4 Score=31.21 Aligned_cols=109 Identities=16% Similarity=0.074 Sum_probs=71.6
Q ss_pred CCCeEEEEecCCCCCCccccceEEEEEEecCCCcCCCccCCCCcEEEEEEeCc-EEEEEEeCCCceEEEEe----cCCcE
Q 048761 74 DTGLATIPVNPTVFPGINTLGMSFVRADLRVGAINPPHFHPRATEIAYVVQGS-VYSGFVDSSSRVFARVI----KQGEV 148 (221)
Q Consensus 74 ~~g~~v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~-~~v~~~~~~~k~~~~~L----~~GDv 148 (221)
|.|+..++.+.+...+-+ .-.+..+.-+.+|....+|.-.+++|+.+-..|. +++.+..+++......| .+|+.
T Consensus 20 PEGG~yrEt~Rs~~~~~R-~~~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge~ 98 (154)
T 1znp_A 20 PEGGFYHQTFRDKAGGER-GHSTAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGER 98 (154)
T ss_dssp TTSSEEEEEEECSSSTTT-CSCEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTEE
T ss_pred CCCccEEEEEeCCCCCCC-cceeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCcc
Confidence 788888888866543322 2356666677888776677642489999999997 88888877666545555 45765
Q ss_pred --EEEcCCCeEEEEecCCCCEEEEEEEcCCCCCceecccch
Q 048761 149 --MVFPRGLMHFQMNVGDEPATIFGSFNSQNPGNQKIPSAI 187 (221)
Q Consensus 149 --~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~~~~~~~l 187 (221)
++||+|.....+..| .-.++...- .||+..-...+
T Consensus 99 pQ~vVP~G~WqaA~~~g--~~~LVsCtV--aPGF~f~dFel 135 (154)
T 1znp_A 99 PQVIVPANCWQSAESLG--DFTLVGCTV--SPGFAFSSFVM 135 (154)
T ss_dssp SEEEECTTCEEEEEESS--SEEEEEEEE--SSCCCGGGEEE
T ss_pred cEEEEcCCEEEEeeECC--CeEEEEEEe--cCCCcccccEe
Confidence 899999877776554 333333322 47776444333
No 174
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=90.29 E-value=1.5 Score=33.06 Aligned_cols=47 Identities=21% Similarity=0.110 Sum_probs=36.2
Q ss_pred EEEEEEeCcEEEEEEeCCCc---eEEEEecCCcEEEEcCCCeEEEEecCC
Q 048761 118 EIAYVVQGSVYSGFVDSSSR---VFARVIKQGEVMVFPRGLMHFQMNVGD 164 (221)
Q Consensus 118 E~~yVl~G~~~v~~~~~~~k---~~~~~L~~GDv~~~P~G~~H~~~N~g~ 164 (221)
.-+.|++|++.+..-++++. .....+.+|+.-++|+...|.+.-.++
T Consensus 40 gkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD 89 (119)
T 3dl3_A 40 GQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDD 89 (119)
T ss_dssp EEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTT
T ss_pred EEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCC
Confidence 46789999999986543332 134689999999999999999994433
No 175
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=89.74 E-value=1.4 Score=40.24 Aligned_cols=77 Identities=14% Similarity=0.092 Sum_probs=48.4
Q ss_pred ceEEEEEEec--CCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEec---CCCCEE
Q 048761 94 GMSFVRADLR--VGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNV---GDEPAT 168 (221)
Q Consensus 94 g~s~~rv~l~--pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~---g~~~a~ 168 (221)
.+++.++++. ++.....-.+ .+..+++|++|++++... +++.....|++||++++|++..-.+.+. +.+.++
T Consensus 356 eF~v~~~~~~~~~~~~~~~~~~-~~~~illv~~G~g~i~~~--~~~~~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~~ 432 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQVIEGL-NGPSIVIATNGKGTIQIT--GDDSTKQKIDTGYVFFVAPGSSIELTADSANQDQDFT 432 (440)
T ss_dssp SCEEEEEECCTTTCCEEEECCC-SSCEEEEEEESEEEEEET--TCGGGCEEEETTCEEEECTTCCEEEEECSSCCSSCCE
T ss_pred eEEEEEEEecCCCCceeEEecC-CCcEEEEEEeCeEEEEeC--CcccceEEeccCCEEEEeCCCcEEEEEecccCCCcEE
Confidence 4788888887 3422111122 357899999999998753 1211015899999999999943334444 144566
Q ss_pred EEEEE
Q 048761 169 IFGSF 173 (221)
Q Consensus 169 ~l~v~ 173 (221)
++.++
T Consensus 433 ~~~a~ 437 (440)
T 1pmi_A 433 TYRAF 437 (440)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65554
No 176
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=88.95 E-value=0.58 Score=43.73 Aligned_cols=62 Identities=19% Similarity=0.274 Sum_probs=45.2
Q ss_pred CCCcCCCccCCCCc-EEEEEEeCcEEEEEEeCC-------------------------CceEEEEecCCcEEEEcCCCeE
Q 048761 104 VGAINPPHFHPRAT-EIAYVVQGSVYSGFVDSS-------------------------SRVFARVIKQGEVMVFPRGLMH 157 (221)
Q Consensus 104 pgg~~ppH~Hp~a~-E~~yVl~G~~~v~~~~~~-------------------------~k~~~~~L~~GDv~~~P~G~~H 157 (221)
.|+...+|..+.++ -+..|++|+=..-+..+. ++.+...+++||++++|.|.+|
T Consensus 305 ~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~H 384 (528)
T 3pur_A 305 AGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWIH 384 (528)
T ss_dssp TTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCEE
T ss_pred CCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCceE
Confidence 44556788877544 466788888777666542 1224589999999999999999
Q ss_pred EEEecCCC
Q 048761 158 FQMNVGDE 165 (221)
Q Consensus 158 ~~~N~g~~ 165 (221)
+..|..+.
T Consensus 385 aV~tleDS 392 (528)
T 3pur_A 385 AVLTPVDS 392 (528)
T ss_dssp EEEEEEEE
T ss_pred EEecCCCe
Confidence 99997543
No 177
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=88.41 E-value=1.4 Score=38.32 Aligned_cols=57 Identities=19% Similarity=0.278 Sum_probs=41.4
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHF 158 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~ 158 (221)
-+++.++++..+... .......++.|++|++++.. +++ ...|++||.+++|++.-.+
T Consensus 250 ~F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~~vpa~~~~~ 306 (319)
T 1qwr_A 250 YFSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKY---EDK--TCPLKKGDHFILPAQMPDF 306 (319)
T ss_dssp SCEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCCCE
T ss_pred EEEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEE---CCE--EEEEcCCcEEEEeCCCceE
Confidence 467788888754332 22246789999999999865 244 3789999999999986433
No 178
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=85.87 E-value=0.94 Score=40.71 Aligned_cols=57 Identities=18% Similarity=0.173 Sum_probs=41.5
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHF 158 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~ 158 (221)
-+++.++++.++... ..+. +..++.|++|++++... ++ ...|++||.+++|++...+
T Consensus 323 ~F~v~~~~l~~~~~~--~~~~-~~~il~v~~G~~~l~~~---~~--~~~l~~G~~~fvpa~~~~~ 379 (394)
T 2wfp_A 323 DFAFSLHDLALQETS--IGQH-SAAILFCVEGEAVLRKD---EQ--RLVLKPGESAFIGADESPV 379 (394)
T ss_dssp SCEEEEEECCSSCEE--ECCS-SCEEEEEEEEEEEEEET---TE--EEEECTTCEEEECGGGCCE
T ss_pred EEEEEEEEEcCCeEE--ecCC-CcEEEEEEeceEEEEEC---Ce--EEEEccCcEEEEeCCCceE
Confidence 577888888755321 2343 56899999999987642 33 4799999999999985333
No 179
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=85.61 E-value=4.7 Score=33.61 Aligned_cols=68 Identities=10% Similarity=-0.037 Sum_probs=46.8
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
.+.+..+++++|........+...-++||++|++++. + ..|++||.+++..+..-.+.+. ++++++.+
T Consensus 159 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v~-----g----~~l~~gd~~~~~~~~~l~l~a~--~~a~~Ll~ 226 (242)
T 1tq5_A 159 DMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTIN-----G----VKASTSDGLAIWDEQAISIHAD--SDSEVLLF 226 (242)
T ss_dssp SCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEET-----T----EEEETTCEEEEESCSCEEEEES--SSEEEEEE
T ss_pred CCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEEC-----C----EEeCCCCEEEECCCCeEEEEeC--CCCEEEEE
Confidence 5778889999998763323333456799999998762 3 4699999999987654444442 45665543
No 180
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=85.28 E-value=4.6 Score=34.67 Aligned_cols=77 Identities=17% Similarity=0.135 Sum_probs=49.2
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
..+.+..+.+++|........+...-++||++|++++. +......+.++.++++..|-.-.+.+.++++++++.+
T Consensus 167 ~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~-----g~~~~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LLl 241 (290)
T 1j1l_A 167 TPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG-----PDDAQQKIEPHHTAVLGEGDSVQVENKDPKRSHFVLI 241 (290)
T ss_dssp SCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES-----CTTSCEEECTTEEEEECSCSEEEEECCSSSCEEEEEE
T ss_pred CCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC-----CcccceeccCceEEEecCCCEEEEEEcCCCCcEEEEE
Confidence 35788889999998763322333356899999999863 2100135666777777766655555544567777654
Q ss_pred Ec
Q 048761 173 FN 174 (221)
Q Consensus 173 ~s 174 (221)
--
T Consensus 242 ~G 243 (290)
T 1j1l_A 242 AG 243 (290)
T ss_dssp EE
T ss_pred Ec
Confidence 43
No 181
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=85.20 E-value=3.3 Score=35.64 Aligned_cols=67 Identities=13% Similarity=0.167 Sum_probs=44.8
Q ss_pred ceEEEEEEecCCCcCCCccCCCCc-EEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRAT-EIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~-E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
-+++.++++.+.... .. .+. .++.|++| +++.. +++ ...|++||.+++|++.-.+... |+ .+.++.+
T Consensus 229 ~F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~---~~~--~~~l~~G~~~~ipa~~~~~~i~-g~-~~~~~~a 296 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILR---GKE--TADLHRGYSCLVPASTDSFTVE-SE-RGKIVRI 296 (300)
T ss_dssp SEEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEE---SSS--EEEECTTCEEEECTTCCEEEEE-EE-EEEEEEE
T ss_pred eEEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEe---CCe--EEEEccceEEEEeCCCceEEEE-eC-ceEEEEE
Confidence 477888888743222 23 467 89999999 88765 244 3689999999999987544432 21 3455444
No 182
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=83.86 E-value=1.4 Score=32.49 Aligned_cols=55 Identities=18% Similarity=0.194 Sum_probs=40.6
Q ss_pred EecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEe
Q 048761 101 DLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMN 161 (221)
Q Consensus 101 ~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N 161 (221)
.+.||. .+....+.|+.-|++|++++.+-.+ .. .+.+++||.|.+|++.--.++.
T Consensus 42 Vm~PGe---Y~F~T~~~E~MevvsG~l~V~LpG~-~e--W~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 42 LLHPGV---YTLSSEVAETIRVLSGMAYYHAEGA-ND--VQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp EECSEE---EEECCSSCEEEEEEEEEEEEECTTC-SS--CEEEETTCEEEECSSSCEEEEE
T ss_pred EEeeeE---EEecCCCcEEEEEEEeEEEEECCCC-cc--CEEECCCCEEEECCCCcEEEEE
Confidence 445553 2333347899999999999998632 23 4899999999999998666554
No 183
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=83.79 E-value=1 Score=40.49 Aligned_cols=38 Identities=16% Similarity=0.181 Sum_probs=29.9
Q ss_pred EEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEcCC
Q 048761 139 FARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFNSQ 176 (221)
Q Consensus 139 ~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~ 176 (221)
++..-++||.++||+|.+|..+|..+.--+..-.+|.+
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe 330 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPE 330 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGG
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChh
Confidence 46778999999999999999999986555555555543
No 184
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=83.72 E-value=2 Score=30.98 Aligned_cols=52 Identities=10% Similarity=0.176 Sum_probs=33.2
Q ss_pred EEEEEecCCCcC-CCccCCCCcEEEEEEeCcEEEEEEeCCCc-eE---EEEecCCcEEE
Q 048761 97 FVRADLRVGAIN-PPHFHPRATEIAYVVQGSVYSGFVDSSSR-VF---ARVIKQGEVMV 150 (221)
Q Consensus 97 ~~rv~l~pgg~~-ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k-~~---~~~L~~GDv~~ 150 (221)
+....+++|..+ ...- .+..+++|++|++.+...+++|+ .. ...+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~g~--~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKENS--KADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECTTS--BCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeCCC--CCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 456678888765 3332 26789999999999887655553 22 46789999873
No 185
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=83.56 E-value=5 Score=33.81 Aligned_cols=70 Identities=10% Similarity=0.057 Sum_probs=46.1
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIF 170 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 170 (221)
.+.+..+.+++|........+.. -++||++|++++. +.++. ...|.+||.+++..+..-.+.+ .++++++
T Consensus 181 ~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~~~~--~~~l~~gd~~~l~~~~~l~l~a--~~~a~~L 250 (256)
T 2vec_A 181 QVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--THHEE--KAALTCGDGAFIRDEANITLVA--DSPLRAL 250 (256)
T ss_dssp SCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ETTEE--EEEECTTCEEEEESCSEEEEEE--SSSEEEE
T ss_pred CcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Ccccc--ceEECCCCEEEECCCCeEEEEe--CCCCEEE
Confidence 57788889999987643333333 6899999999875 21111 2679999999998665434444 2455554
No 186
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=83.47 E-value=4.4 Score=34.48 Aligned_cols=71 Identities=15% Similarity=0.157 Sum_probs=47.3
Q ss_pred cceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcC-C----CeEEEEecCCCCE
Q 048761 93 LGMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPR-G----LMHFQMNVGDEPA 167 (221)
Q Consensus 93 ~g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~-G----~~H~~~N~g~~~a 167 (221)
..+.+..+.+++|........+...-++||++|++++. +. ...|.+||.+++.. | ..-.+.+. +++
T Consensus 165 ~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~-----g~--~~~l~~~d~~~~~~~~~~~~~~l~l~a~--~~a 235 (277)
T 2p17_A 165 VPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG-----AD--NIEGKAGQALFFSRHNRGEETELNVTAR--EKL 235 (277)
T ss_dssp SCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET-----TT--TEEEETTEEEEECCCCTTCEEEEEEEES--SSE
T ss_pred CCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC-----CC--ceEeCCCcEEEEcCCCCCccceEEEEeC--CCc
Confidence 36788889999998764333223356899999998763 32 14699999999986 5 33334443 356
Q ss_pred EEEEE
Q 048761 168 TIFGS 172 (221)
Q Consensus 168 ~~l~v 172 (221)
+++.+
T Consensus 236 ~~Ll~ 240 (277)
T 2p17_A 236 RLLLY 240 (277)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66543
No 187
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=82.96 E-value=3.2 Score=30.00 Aligned_cols=52 Identities=17% Similarity=0.183 Sum_probs=37.2
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~ 149 (221)
+....+++|..+-..--+ +..+++|++|++.+...+++|+. ....+.+||++
T Consensus 28 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 28 MSEVTLARGDTLFHEGDP-GDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELI 80 (149)
T ss_dssp CEEEEECTTCEEECTTSE-ECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEE
T ss_pred ceEEEeCCCCEEECCCCC-CCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEe
Confidence 346678888765322222 57799999999999887766653 35688999987
No 188
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=79.65 E-value=5.2 Score=29.71 Aligned_cols=51 Identities=4% Similarity=-0.053 Sum_probs=35.3
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCc-eEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSR-VFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k-~~~~~L~~GDv~ 149 (221)
+....+++|..+-.. ...+..+++|++|++.+.. +.+|+ .....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVIDQ-GDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEeC-CCCCcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 445678888765322 2236789999999999988 44454 334678899976
No 189
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=79.02 E-value=5.9 Score=30.47 Aligned_cols=52 Identities=15% Similarity=0.175 Sum_probs=36.9
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEEE
Q 048761 98 VRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVMV 150 (221)
Q Consensus 98 ~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~~ 150 (221)
....+++|..+-..-- ....+++|++|.+.+...+++|+. ....+.+||++-
T Consensus 14 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 14 HRRRYTAKSTIIYAGD-RCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFG 66 (207)
T ss_dssp EEEEECTTCEEECTTS-BCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEES
T ss_pred ceEEECCCCEEEcCCC-CCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcc
Confidence 3457788876522212 257899999999999888766653 456889999984
No 190
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=78.65 E-value=5.9 Score=30.68 Aligned_cols=115 Identities=13% Similarity=0.011 Sum_probs=70.8
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEEEEc---CCC--eEEEEecCCCCEEEEE
Q 048761 98 VRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVMVFP---RGL--MHFQMNVGDEPATIFG 171 (221)
Q Consensus 98 ~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~~~P---~G~--~H~~~N~g~~~a~~l~ 171 (221)
....+++|..+-..-.+ ...+++|++|.+.+...+++|+. ....+.+||++-.. .+. .+.... .+++.++.
T Consensus 23 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a--~~~~~v~~ 99 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGDL-GQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVA--VEDTELLA 99 (216)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEE--SSSEEEEE
T ss_pred eEEEeCCCCEEEeCCCC-CCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEE--cCCEEEEE
Confidence 45678888765332222 57899999999999988766653 45789999987321 112 233333 34555554
Q ss_pred EEcC-------CCCCcee----------------------------cccchh---------cCCCCHHHHHHHhCCCHHH
Q 048761 172 SFNS-------QNPGNQK----------------------------IPSAIF---------GSGIDVELLEKAFGLSPKQ 207 (221)
Q Consensus 172 v~ss-------~~pg~~~----------------------------~~~~lf---------~~~~p~evla~af~~~~~~ 207 (221)
+-.. ++|.... +...+. .-.++.+-+|.-.|+++++
T Consensus 100 i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 179 (216)
T 4ev0_A 100 LFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSRET 179 (216)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSCHHH
T ss_pred EcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCCHHH
Confidence 4221 2444310 111111 1158899999999999999
Q ss_pred HHHhhhcC
Q 048761 208 IGTMRRRF 215 (221)
Q Consensus 208 v~~l~~~~ 215 (221)
+.++.+.+
T Consensus 180 vsR~l~~l 187 (216)
T 4ev0_A 180 VSRVLHAL 187 (216)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98887664
No 191
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=77.85 E-value=6.6 Score=30.72 Aligned_cols=52 Identities=21% Similarity=0.131 Sum_probs=37.9
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEEE
Q 048761 98 VRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVMV 150 (221)
Q Consensus 98 ~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~~ 150 (221)
....+++|..+-..--+ ...+++|++|.+.+...+++|+. ....+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGDP-AGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 45678888765332222 57899999999999988777653 356789999984
No 192
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=77.83 E-value=7.3 Score=30.55 Aligned_cols=114 Identities=11% Similarity=0.125 Sum_probs=70.3
Q ss_pred EEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEEEEc---CC--CeEEEEecCCCCEEEEEE
Q 048761 99 RADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVMVFP---RG--LMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 99 rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~~~P---~G--~~H~~~N~g~~~a~~l~v 172 (221)
...+++|..+-..--+ +..+++|++|.+.+...+++|+. ....+.+||++-.. .+ ..+..... +++.++.+
T Consensus 31 ~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~v~~i 107 (227)
T 3d0s_A 31 PVDFPRGHTVFAEGEP-GDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTI--TEVRAVSM 107 (227)
T ss_dssp EEEECTTCEEECTTCC-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEES--SCEEEEEE
T ss_pred EEEeCCCCEEEcCCCc-CCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEc--ccEEEEEE
Confidence 5678888765322222 57899999999999988766653 35688999987321 12 22334443 44555543
Q ss_pred Ec-------CCCCCcee----------------------------cccc----------------hhcCCCCHHHHHHHh
Q 048761 173 FN-------SQNPGNQK----------------------------IPSA----------------IFGSGIDVELLEKAF 201 (221)
Q Consensus 173 ~s-------s~~pg~~~----------------------------~~~~----------------lf~~~~p~evla~af 201 (221)
-. .++|.... ++.. .+.-.++.+-||.-.
T Consensus 108 ~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~lA~~l 187 (227)
T 3d0s_A 108 DRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLV 187 (227)
T ss_dssp EHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHEEEETTEEEEECCCCHHHHHHHH
T ss_pred eHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCcCCCceEEcCCCCHHHHHHHh
Confidence 22 24554310 0000 112258899999999
Q ss_pred CCCHHHHHHhhhcC
Q 048761 202 GLSPKQIGTMRRRF 215 (221)
Q Consensus 202 ~~~~~~v~~l~~~~ 215 (221)
|++++++.++.+.+
T Consensus 188 g~sr~tvsR~l~~l 201 (227)
T 3d0s_A 188 GASRETVNKALADF 201 (227)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 99999998887654
No 193
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=77.67 E-value=13 Score=31.70 Aligned_cols=72 Identities=11% Similarity=0.024 Sum_probs=47.7
Q ss_pred eEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecC--------CcEEEEcCCCeEEEEecCCCC
Q 048761 95 MSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQ--------GEVMVFPRGLMHFQMNVGDEP 166 (221)
Q Consensus 95 ~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~--------GDv~~~P~G~~H~~~N~g~~~ 166 (221)
+.+..++|++|.......-. .+-.++.+.|++++.+. ++.+...-+. .|.+++|+|.--.+...+ +
T Consensus 29 ~~f~~~~L~~Ge~~~~~~~~-~E~~iv~l~G~~~V~~~---g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~--~ 102 (270)
T 2qjv_A 29 VGFDVWQLXAGESITLPSDE-RERCLVLVAGLASVXAA---DSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAET--D 102 (270)
T ss_dssp CEEEEEEECTTCEEEECCSS-EEEEEEEEESCEEEEET---TEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESS--S
T ss_pred eEEEEEEecCCCEEEecCCC-cEEEEEEecceEEEEEC---CEEEeccccccccccCCCCcEEEECCCCEEEEEecC--C
Confidence 67888899999887666542 34456678899999875 5532221223 599999999954455544 4
Q ss_pred EEEEEE
Q 048761 167 ATIFGS 172 (221)
Q Consensus 167 a~~l~v 172 (221)
+.+...
T Consensus 103 ~~~~v~ 108 (270)
T 2qjv_A 103 LELAVC 108 (270)
T ss_dssp EEEEEE
T ss_pred ceEEEE
Confidence 665543
No 194
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=77.46 E-value=7.2 Score=30.66 Aligned_cols=53 Identities=13% Similarity=0.053 Sum_probs=37.7
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCc-eEEEEecCCcEEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSR-VFARVIKQGEVMV 150 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k-~~~~~L~~GDv~~ 150 (221)
+....+++|..+-..-.+ ...+++|++|.+.+...+++|+ .....+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 29 VTERNFQPDELVVEQDAE-GEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp EEEEEECTTCBCCCTTCT-TTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred cEEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 456788888876433333 5789999999999988876665 3357899999873
No 195
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=77.02 E-value=7.1 Score=30.83 Aligned_cols=51 Identities=20% Similarity=0.120 Sum_probs=37.3
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEE
Q 048761 98 VRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVM 149 (221)
Q Consensus 98 ~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~ 149 (221)
....+++|..+-..-.+ ...+++|++|.+.+...+++|+. ....+.+||++
T Consensus 35 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEEK-AQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 45678888765322222 57899999999999988776653 45678999987
No 196
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=76.88 E-value=12 Score=29.25 Aligned_cols=113 Identities=14% Similarity=0.051 Sum_probs=70.6
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEc-
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFN- 174 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~s- 174 (221)
+....+++|..+-..-.+ ...+++|++|.+.+. .+++|+. ....+.+||++- ....+..... +++.++.+-.
T Consensus 23 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~--~~~~v~~i~~~ 96 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGEGD-ENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC--MHSGCLVEAT--ERTEVRFADIR 96 (222)
T ss_dssp CEEEEECTTCEEECTTCC-CCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE--SCSSCEEEES--SCEEEEEECHH
T ss_pred CcEEEECCCCEEECCCCC-CCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec--CCCCEEEEEc--cceEEEEEeHH
Confidence 345678888765332222 577999999999995 5555553 356889999987 3334444443 4555554322
Q ss_pred ------CCCCCcee----------------------------cccc----------------hhcCCCCHHHHHHHhCCC
Q 048761 175 ------SQNPGNQK----------------------------IPSA----------------IFGSGIDVELLEKAFGLS 204 (221)
Q Consensus 175 ------s~~pg~~~----------------------------~~~~----------------lf~~~~p~evla~af~~~ 204 (221)
.++|.... +... .+.-.++.+-||.-.|++
T Consensus 97 ~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~~t~~~lA~~lG~s 176 (222)
T 1ft9_A 97 TFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTQGGVIVSVDFTVEEIANLIGSS 176 (222)
T ss_dssp HHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCBCCCSCC--CCCCEECCCHHHHHHHHCSC
T ss_pred HHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCc
Confidence 13565410 0000 011158899999999999
Q ss_pred HHHHHHhhhcC
Q 048761 205 PKQIGTMRRRF 215 (221)
Q Consensus 205 ~~~v~~l~~~~ 215 (221)
++++.++.+.+
T Consensus 177 r~tvsR~l~~L 187 (222)
T 1ft9_A 177 RQTTSTALNSL 187 (222)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99998887654
No 197
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=76.83 E-value=3.1 Score=30.35 Aligned_cols=52 Identities=17% Similarity=0.156 Sum_probs=34.7
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~ 149 (221)
+....+++|..+-..-.+ ...+++|++|.+.+...+++|+. ....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCCc-cceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 455678888765333232 57899999999998876554442 34688899987
No 198
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=76.58 E-value=1.6 Score=37.72 Aligned_cols=45 Identities=18% Similarity=0.252 Sum_probs=34.2
Q ss_pred CcEEEEEEe-CcEEEEEEeCC-----------Cc------eEEEEecCCcEEEEcCCCeEEEE
Q 048761 116 ATEIAYVVQ-GSVYSGFVDSS-----------SR------VFARVIKQGEVMVFPRGLMHFQM 160 (221)
Q Consensus 116 a~E~~yVl~-G~~~v~~~~~~-----------~k------~~~~~L~~GDv~~~P~G~~H~~~ 160 (221)
-.|++|+++ .++.+||.... ++ .-...+++||.+++|+|.+|...
T Consensus 117 KpE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 117 VESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CCEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEE
T ss_pred CcEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcC
Confidence 579999999 56777765321 12 23578999999999999999874
No 199
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=76.36 E-value=7.9 Score=29.78 Aligned_cols=116 Identities=15% Similarity=0.147 Sum_probs=70.7
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEEEEc----CC--CeEEEEecCCCCEEEE
Q 048761 98 VRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVMVFP----RG--LMHFQMNVGDEPATIF 170 (221)
Q Consensus 98 ~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~~~P----~G--~~H~~~N~g~~~a~~l 170 (221)
....+++|..+-..--+ ...+++|++|.+.+...+++|+. ....+.+||++-.. .+ ..+..... +++.++
T Consensus 20 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~v~ 96 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAK--TACEVA 96 (210)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEES--SCEEEE
T ss_pred EEEEeCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEEC--CcEEEE
Confidence 34577888765322222 57899999999999988776653 34678999998422 11 22233333 455555
Q ss_pred EEEc-------CCCCCcee----------------------------cccch---------------hcCCCCHHHHHHH
Q 048761 171 GSFN-------SQNPGNQK----------------------------IPSAI---------------FGSGIDVELLEKA 200 (221)
Q Consensus 171 ~v~s-------s~~pg~~~----------------------------~~~~l---------------f~~~~p~evla~a 200 (221)
.+-. .++|.... +...+ +.-.++.+-||.-
T Consensus 97 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~iA~~ 176 (210)
T 3ryp_A 97 EISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQI 176 (210)
T ss_dssp EEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHHHHHHH
T ss_pred EEcHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCcCCCCCceEeccCHHHHHHH
Confidence 4422 13454310 00000 0014788999999
Q ss_pred hCCCHHHHHHhhhcCC
Q 048761 201 FGLSPKQIGTMRRRFD 216 (221)
Q Consensus 201 f~~~~~~v~~l~~~~~ 216 (221)
.|++++++.++.+.+.
T Consensus 177 lg~sr~tvsR~l~~L~ 192 (210)
T 3ryp_A 177 VGCSRETVGRILKMLE 192 (210)
T ss_dssp HTCCHHHHHHHHHHHH
T ss_pred hCCcHHHHHHHHHHHH
Confidence 9999999998876653
No 200
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=75.88 E-value=39 Score=29.96 Aligned_cols=77 Identities=6% Similarity=-0.123 Sum_probs=49.0
Q ss_pred EEEecCCCCCCccccceEEEEEEecCCCcCC-CccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeE
Q 048761 79 TIPVNPTVFPGINTLGMSFVRADLRVGAINP-PHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMH 157 (221)
Q Consensus 79 v~~~~~~~~P~l~~~g~s~~rv~l~pgg~~p-pH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H 157 (221)
.+.+.....|-+.. +....+++..++... .--| +.--..|++|++++.+..++|. .+..|+++|..++-+-++|
T Consensus 320 Ye~AS~A~~phlPd--l~g~~l~Vd~~d~~~DL~d~--ge~hY~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H 394 (443)
T 3g7d_A 320 YEAASMASAAHLPD--LVGSFLRVDADGRGADLIDH--AENHYVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRH 394 (443)
T ss_dssp EEEEECCCCTTCTT--CEEEEEEEC------CBCCS--SEEEEEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCE
T ss_pred eehhhhhccccCCC--ceeEEEEecCCCcchhhhhc--ccceEEEecCceEEEecCCCCc-cceEECCCCceeecccccc
Confidence 44444455555533 233344444443322 1113 3444558999999999877654 7899999999999999999
Q ss_pred EEE
Q 048761 158 FQM 160 (221)
Q Consensus 158 ~~~ 160 (221)
.+.
T Consensus 395 ~w~ 397 (443)
T 3g7d_A 395 RWH 397 (443)
T ss_dssp EEE
T ss_pred ccc
Confidence 998
No 201
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=75.58 E-value=15 Score=28.49 Aligned_cols=113 Identities=14% Similarity=0.182 Sum_probs=71.1
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCc-eEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEEEc-
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSR-VFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGSFN- 174 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k-~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v~s- 174 (221)
+....+++|..+-..-.+ +..+++|++|.+.+ ..+.+|+ .....+.+||++-.| ..+..... +++.++.+-.
T Consensus 27 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~-~~~~~G~~~~~~~~~~G~~~G~~--~~~~~~A~--~~~~v~~i~~~ 100 (220)
T 2fmy_A 27 FREQRYSKKAILYTPNTE-RNLVFLVKSGRVRV-YLAYEDKEFTLAILEAGDIFCTH--TRAFIQAM--EDTTILYTDIR 100 (220)
T ss_dssp SEEEEECTTCEEECTTCS-SCEEEEEEESEEEE-EEECSSCEEEEEEEETTCEEESC--SSSEEEES--SSEEEEEEEHH
T ss_pred hheeEeCCCCEEECCCCC-CCeEEEEEecEEEE-EECCCCCEEEEEEcCCCCEeCCc--cceEEEEc--CcEEEEEEeHH
Confidence 345678888765322222 57899999999999 4555555 335788999998762 23344443 4555554432
Q ss_pred ------CCCCCcee----------------------------c-------cc---------chhcCCCCHHHHHHHhCCC
Q 048761 175 ------SQNPGNQK----------------------------I-------PS---------AIFGSGIDVELLEKAFGLS 204 (221)
Q Consensus 175 ------s~~pg~~~----------------------------~-------~~---------~lf~~~~p~evla~af~~~ 204 (221)
.++|.... + +. ..+.-.++.+-||.-.|++
T Consensus 101 ~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~~~~t~~~lA~~lg~s 180 (220)
T 2fmy_A 101 NFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLELGLNTEEIALMLGTT 180 (220)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEECSSCHHHHHHHHTSC
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCc
Confidence 13554410 0 00 0011268899999999999
Q ss_pred HHHHHHhhhcC
Q 048761 205 PKQIGTMRRRF 215 (221)
Q Consensus 205 ~~~v~~l~~~~ 215 (221)
++++.++.+.+
T Consensus 181 r~tvsR~l~~l 191 (220)
T 2fmy_A 181 RQTVSVLLNDF 191 (220)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999887665
No 202
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=75.06 E-value=7.1 Score=30.00 Aligned_cols=49 Identities=12% Similarity=-0.008 Sum_probs=33.7
Q ss_pred EecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCc-eEEEEecCCcEEE
Q 048761 101 DLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSR-VFARVIKQGEVMV 150 (221)
Q Consensus 101 ~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k-~~~~~L~~GDv~~ 150 (221)
.+++|..+-..-.+ +..+++|++|.+.+...+++|+ .....+.+||++-
T Consensus 3 ~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 3 RFARKETIYLRGEE-ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFG 52 (195)
T ss_dssp EECTTCEEECTTSB-CCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred EcCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEec
Confidence 45666554222122 5679999999999988776665 3356889999884
No 203
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=75.01 E-value=7.8 Score=29.83 Aligned_cols=52 Identities=8% Similarity=-0.041 Sum_probs=37.8
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCc-eEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSR-VFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k-~~~~~L~~GDv~ 149 (221)
+....+++|..+-..=-+ +..+++|++|++.+...+++|+ .....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~G~~-~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGDP-GDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCCC-CCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 445678888765322222 6789999999999998877664 345688999987
No 204
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=74.99 E-value=9.2 Score=29.63 Aligned_cols=117 Identities=15% Similarity=0.163 Sum_probs=71.1
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEEEEc-----CCCeEEEEecCCCCEEEEE
Q 048761 98 VRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVMVFP-----RGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 98 ~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~~~P-----~G~~H~~~N~g~~~a~~l~ 171 (221)
....+++|..+-..-.+ ...+++|++|.+.+...+++|+. ....+.+||++.+. .+.++...-...+++.++.
T Consensus 27 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~~~~~~~~ 105 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNMD-CTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAEKDTDLWI 105 (220)
T ss_dssp EEEEECTTCEEEEGGGC-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEESSCEEEEE
T ss_pred ceEEeCCCCEEECCCCC-cceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEeeeeEEEE
Confidence 45678888765332222 57899999999999988777653 34678899996321 2222222222234566554
Q ss_pred EEcC-------CCCCcee----------------------------ccc------chhcC---CCCHHHHHHHhCCCHHH
Q 048761 172 SFNS-------QNPGNQK----------------------------IPS------AIFGS---GIDVELLEKAFGLSPKQ 207 (221)
Q Consensus 172 v~ss-------~~pg~~~----------------------------~~~------~lf~~---~~p~evla~af~~~~~~ 207 (221)
+-.. ++|.... +.. ...+. .++.+-||.-.|+++++
T Consensus 106 i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 185 (220)
T 3dv8_A 106 IPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGSHREV 185 (220)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSSEECCCHHHHHHHHTCCHHH
T ss_pred EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCceecCCHHHHHHHhCCCHHH
Confidence 4221 2443310 000 11111 68899999999999999
Q ss_pred HHHhhhcC
Q 048761 208 IGTMRRRF 215 (221)
Q Consensus 208 v~~l~~~~ 215 (221)
+.++.+.+
T Consensus 186 vsR~l~~L 193 (220)
T 3dv8_A 186 ITRMLRYF 193 (220)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887664
No 205
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=74.86 E-value=6.7 Score=30.28 Aligned_cols=49 Identities=12% Similarity=0.049 Sum_probs=35.4
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
+....+.||..+-..=.+ +..+.+|++|++.+.. ++|+ ....+.+||++
T Consensus 94 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQEGTF-GDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECTTSC-CSEEEEEEECCEEEEC--TTSC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEECCCc-CcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEe
Confidence 456678888765332222 5789999999999875 4466 46789999987
No 206
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=74.47 E-value=9.1 Score=29.15 Aligned_cols=114 Identities=12% Similarity=0.151 Sum_probs=48.4
Q ss_pred EEEEecCCCcC-CCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEEE-Ec---CCCeE--EEEecCCCCEEE
Q 048761 98 VRADLRVGAIN-PPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVMV-FP---RGLMH--FQMNVGDEPATI 169 (221)
Q Consensus 98 ~rv~l~pgg~~-ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~~-~P---~G~~H--~~~N~g~~~a~~ 169 (221)
....+++|..+ ...- .+..+++|++|.+.+...+++|+. ....+.+||++- +. .+.++ .... -+++.+
T Consensus 31 ~~~~~~~g~~l~~~G~--~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a--~~~~~v 106 (194)
T 3dn7_A 31 QLKKVRKKETLLKTGE--ICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQS--VENCEL 106 (194)
T ss_dssp EEEEECTTCEEECTTS--BCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEE--SSCEEE
T ss_pred EEEEEcCCCEEECCCC--eeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEE--ECCEEE
Confidence 45678888765 3332 257899999999999988776653 346789999985 21 22222 3333 345555
Q ss_pred EEEEc-------CCCCCcee----------------------------cccch-----hcCCCCHHHHHHHhCCCHHHHH
Q 048761 170 FGSFN-------SQNPGNQK----------------------------IPSAI-----FGSGIDVELLEKAFGLSPKQIG 209 (221)
Q Consensus 170 l~v~s-------s~~pg~~~----------------------------~~~~l-----f~~~~p~evla~af~~~~~~v~ 209 (221)
+.+-. .++|.... +...+ +.-.++.+-||.-.|++++++.
T Consensus 107 ~~i~~~~~~~l~~~~p~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~~~~t~~~iA~~lG~sretls 186 (194)
T 3dn7_A 107 LSITYTEQENLFERIPALERYFRLVYQKSFAAAQLRSKFQHMYSKEEQYHNFSSRFPEFIQRVPQYLLASYLGFTPEYLS 186 (194)
T ss_dssp EEEEHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHHC-------------------------------------
T ss_pred EEEeHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHChHHHHHCCHHHHHHHhCCCHHHHH
Confidence 54422 12454410 11011 1115788888999999999999
Q ss_pred HhhhcC
Q 048761 210 TMRRRF 215 (221)
Q Consensus 210 ~l~~~~ 215 (221)
|+.++.
T Consensus 187 R~l~~l 192 (194)
T 3dn7_A 187 EIRKKY 192 (194)
T ss_dssp ------
T ss_pred HHHHhh
Confidence 887764
No 207
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=73.98 E-value=7.8 Score=30.85 Aligned_cols=114 Identities=10% Similarity=0.085 Sum_probs=69.0
Q ss_pred EEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEE-EEecCCcEEEEcC---CC----eEEEEecCCCCEEEE
Q 048761 99 RADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFA-RVIKQGEVMVFPR---GL----MHFQMNVGDEPATIF 170 (221)
Q Consensus 99 rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~-~~L~~GDv~~~P~---G~----~H~~~N~g~~~a~~l 170 (221)
...+++|..+-.--- ....+++|++|.+.+...+.+|+... ..+ +||++-... +. .+...... +++.++
T Consensus 20 ~~~~~~ge~i~~~G~-~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v~ 96 (238)
T 2bgc_A 20 PKQFHKKELIFNQWD-PQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQATAY 96 (238)
T ss_dssp CEEEETTCEEECTTC-CCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEEEE
T ss_pred EEEECCCCEEEeCCC-CCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceEEE
Confidence 456777776522212 25789999999999988877776433 345 899985432 22 34555444 456555
Q ss_pred EEEc-------CCCCCcee----------------------------cccc----------------hhcC-CCCHHHHH
Q 048761 171 GSFN-------SQNPGNQK----------------------------IPSA----------------IFGS-GIDVELLE 198 (221)
Q Consensus 171 ~v~s-------s~~pg~~~----------------------------~~~~----------------lf~~-~~p~evla 198 (221)
.+-. .++|.... +... .+.- .++.+-||
T Consensus 97 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rla~~L~~l~~~~g~~~~~~~~i~~~~~t~~~lA 176 (238)
T 2bgc_A 97 VIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICSQLLILTYVYGKETPDGIKITLDNLTMQELG 176 (238)
T ss_dssp EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHEEEETTEEEECCSCCCHHHHH
T ss_pred EEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhCCCCCCceEEEeccCCHHHHH
Confidence 4422 12444310 0000 1222 47889999
Q ss_pred HHhCCCH-HHHHHhhhcC
Q 048761 199 KAFGLSP-KQIGTMRRRF 215 (221)
Q Consensus 199 ~af~~~~-~~v~~l~~~~ 215 (221)
.-.|+++ +++.|+.+.+
T Consensus 177 ~~lG~sr~etvsR~l~~l 194 (238)
T 2bgc_A 177 YSSGIAHSSAVSRIISKL 194 (238)
T ss_dssp HHTTCCCHHHHHHHHHHH
T ss_pred HHhCCChHHHHHHHHHHH
Confidence 9999999 7888877654
No 208
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=73.60 E-value=9.3 Score=31.00 Aligned_cols=117 Identities=15% Similarity=0.124 Sum_probs=71.5
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEEEEcC----C--CeEEEEecCCCCEEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVMVFPR----G--LMHFQMNVGDEPATI 169 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~~~P~----G--~~H~~~N~g~~~a~~ 169 (221)
+....+++|..+-..=-+ ...+++|++|.+.+...+++|+. ....+.+||++-... + ........ +++.+
T Consensus 69 ~~~~~~~~ge~i~~~G~~-~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~--~~~~l 145 (260)
T 3kcc_A 69 CHIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAK--TACEV 145 (260)
T ss_dssp SEEEEECTTCEEECTTCB-CCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEES--SCEEE
T ss_pred CEEEEECCCCEEECCCCc-CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEEC--CCeEE
Confidence 345678888765322222 57899999999999988766653 457789999984321 1 12233333 45555
Q ss_pred EEEEc-------CCCCCcee----------------------------cccch------h---------cCCCCHHHHHH
Q 048761 170 FGSFN-------SQNPGNQK----------------------------IPSAI------F---------GSGIDVELLEK 199 (221)
Q Consensus 170 l~v~s-------s~~pg~~~----------------------------~~~~l------f---------~~~~p~evla~ 199 (221)
+.+-. .++|.... +...+ + .-.++.+-||.
T Consensus 146 ~~i~~~~~~~l~~~~p~l~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~Ll~l~~~~~~~~~~~~~~l~lt~~~lA~ 225 (260)
T 3kcc_A 146 AEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLLVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQ 225 (260)
T ss_dssp EEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTSTTCEEETTEEEEECCHHHHHH
T ss_pred EEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCceeecCCHHHHHH
Confidence 54422 13454410 00000 0 00478899999
Q ss_pred HhCCCHHHHHHhhhcCC
Q 048761 200 AFGLSPKQIGTMRRRFD 216 (221)
Q Consensus 200 af~~~~~~v~~l~~~~~ 216 (221)
-.|++++++.++.+.+.
T Consensus 226 ~lG~sr~tvsR~l~~L~ 242 (260)
T 3kcc_A 226 IVGCSRETVGRILKMLE 242 (260)
T ss_dssp HHTCCHHHHHHHHHHHH
T ss_pred HhCCCHHHHHHHHHHHH
Confidence 99999999998877653
No 209
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=73.29 E-value=7.7 Score=32.56 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=38.1
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
+....+++|..+-.-=.+ +..+++|++|.+.+...+.+|+.....+.+||++
T Consensus 36 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 36 VQPLRAAAGQVLLRQGEP-AVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp CEEEEECTTCEEECTTSB-CCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred CeEEEECCCCEEEeCCCc-CCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 345678888764222122 5679999999999988877776566889999987
No 210
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=73.24 E-value=9.7 Score=30.42 Aligned_cols=117 Identities=12% Similarity=0.114 Sum_probs=72.4
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEEEEc---CCCe----EEEEecCCCCEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVMVFP---RGLM----HFQMNVGDEPAT 168 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~~~P---~G~~----H~~~N~g~~~a~ 168 (221)
+....+++|..+-..--+ ...+++|++|.+.+...+++|+. ....+.+||++-.. .+.. ..... -+++.
T Consensus 43 ~~~~~~~~ge~i~~~G~~-~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A--~~~~~ 119 (243)
T 3la7_A 43 PVVETFERNKTIFFPGDP-AERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVA--FTPVE 119 (243)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHSSCCSBCCEEEEE--SSSEE
T ss_pred heeEEECCCCEEEcCCCC-CceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhCCCCCcceEEEEE--ccceE
Confidence 446678888875332222 57899999999999988777653 45678999987321 1211 22333 34555
Q ss_pred EEEEEc-------CCCCCcee----------------------------cccc----------------hhcCCCCHHHH
Q 048761 169 IFGSFN-------SQNPGNQK----------------------------IPSA----------------IFGSGIDVELL 197 (221)
Q Consensus 169 ~l~v~s-------s~~pg~~~----------------------------~~~~----------------lf~~~~p~evl 197 (221)
++.+-. .++|.... ++.. .+.-.++.+-|
T Consensus 120 v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~L~~l~~~~g~~~~~~~~i~~~lt~~~l 199 (243)
T 3la7_A 120 LLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADGITIDLKLSHQAI 199 (243)
T ss_dssp EEEEEHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHEEECSSSEEECSCCCHHHH
T ss_pred EEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCeEEeccCCHHHH
Confidence 554422 24554410 0000 11125789999
Q ss_pred HHHhCCCHHHHHHhhhcCC
Q 048761 198 EKAFGLSPKQIGTMRRRFD 216 (221)
Q Consensus 198 a~af~~~~~~v~~l~~~~~ 216 (221)
|.-.|++++++.|+.+.+.
T Consensus 200 A~~lG~sr~tvsR~l~~L~ 218 (243)
T 3la7_A 200 AEAIGSTRVTVTRLLGDLR 218 (243)
T ss_dssp HHHHTCCHHHHHHHHHHHH
T ss_pred HHHHCCcHHHHHHHHHHHH
Confidence 9999999999988876653
No 211
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=73.15 E-value=7.5 Score=30.38 Aligned_cols=118 Identities=13% Similarity=0.155 Sum_probs=48.4
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEEEE----cCC--CeEEEEecCCCCEEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVMVF----PRG--LMHFQMNVGDEPATI 169 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~~~----P~G--~~H~~~N~g~~~a~~ 169 (221)
+....+++|..+-..-.+ ...+++|++|.+.+...+++|+. ....+.+||++-. ..+ ..+..... +++.+
T Consensus 22 ~~~~~~~~g~~i~~~G~~-~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~--~~~~v 98 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQDDP-IEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAG--ENSKI 98 (213)
T ss_dssp SEEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEES--SSEEE
T ss_pred cEEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEc--cceEE
Confidence 445678888765332222 57899999999999887766653 3467899998732 212 23334443 44555
Q ss_pred EEEEc-------CCCCCce----------------------------ecccch---------hcCCCCHHHHHHHhCCCH
Q 048761 170 FGSFN-------SQNPGNQ----------------------------KIPSAI---------FGSGIDVELLEKAFGLSP 205 (221)
Q Consensus 170 l~v~s-------s~~pg~~----------------------------~~~~~l---------f~~~~p~evla~af~~~~ 205 (221)
+.+-. .++|... .+...+ +.-.++.+-||.-.|+++
T Consensus 99 ~~i~~~~~~~l~~~~p~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~g~~~~~~t~~~lA~~lg~sr 178 (213)
T 1o5l_A 99 LSIPKEVFLDLLMKDRELLLFFLKDVSEHFRVVSEKLFFLTTKTLREKLMNFLVRHMNEKRELTLPVTLEELSRLFGCAR 178 (213)
T ss_dssp EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------------------------------------
T ss_pred EEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhccCCcccCCCCHHHHHHHhCCCH
Confidence 53322 1244431 011111 111467788888889998
Q ss_pred HHHHHhhhcCCC
Q 048761 206 KQIGTMRRRFDP 217 (221)
Q Consensus 206 ~~v~~l~~~~~~ 217 (221)
+++.++.+.+..
T Consensus 179 ~tvsR~l~~L~~ 190 (213)
T 1o5l_A 179 PALSRVFQELER 190 (213)
T ss_dssp ------------
T ss_pred HHHHHHHHHHHH
Confidence 888888776643
No 212
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=72.29 E-value=6.9 Score=30.38 Aligned_cols=48 Identities=8% Similarity=0.066 Sum_probs=33.9
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
+....+.||..+-..-.+ +.++++|++|++.+. ..+|+. ..+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~~-~~~ly~I~~G~v~v~--~~~g~~--~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGTI-GKKMYFIQHGVVSVL--TKGNKE--MKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECEEEEE--CTTSCC--EEEETTCEE
T ss_pred CCceEECCCCEEEECCCc-CCeEEEEeccEEEEE--ECCCeE--EEEcCCCEe
Confidence 445678888765333233 578999999999875 344564 579999987
No 213
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=72.22 E-value=9.5 Score=30.52 Aligned_cols=117 Identities=9% Similarity=0.040 Sum_probs=71.6
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEEEE--cCCCeEEEEecCCCCEEEEEEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVMVF--PRGLMHFQMNVGDEPATIFGSF 173 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~~~--P~G~~H~~~N~g~~~a~~l~v~ 173 (221)
.....+++|..+-..--+ +..+++|++|.+.+...+++|+. ....+.+||++-. .....+.... -+++.++.+-
T Consensus 32 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A--~~~~~v~~i~ 108 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMPGEE-ITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATA--MEPTRTCWFS 108 (250)
T ss_dssp SEEEEECTTCEEECTTCC-CCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEE--SSSEEEEEEC
T ss_pred CeEEEECCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEE--cccEEEEEEc
Confidence 345678888765332222 57799999999999988777653 3467899999842 2222233333 3455555332
Q ss_pred c-------CCCCCcee----------------------------cccc----------------hhcCCCCHHHHHHHhC
Q 048761 174 N-------SQNPGNQK----------------------------IPSA----------------IFGSGIDVELLEKAFG 202 (221)
Q Consensus 174 s-------s~~pg~~~----------------------------~~~~----------------lf~~~~p~evla~af~ 202 (221)
. .++|.... +... .+.-.++.+-||.-.|
T Consensus 109 ~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~iA~~lG 188 (250)
T 3e6c_C 109 EKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITG 188 (250)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCEEETTEEEEECCCCHHHHHHHHT
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCcEecCCCCHHHHHHHhC
Confidence 1 12454310 0000 1122678999999999
Q ss_pred CCHHHHHHhhhcCC
Q 048761 203 LSPKQIGTMRRRFD 216 (221)
Q Consensus 203 ~~~~~v~~l~~~~~ 216 (221)
++++++.++.+.+.
T Consensus 189 ~sr~tvsR~l~~L~ 202 (250)
T 3e6c_C 189 VHHVTVSRVLASLK 202 (250)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH
Confidence 99999998876643
No 214
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=70.92 E-value=9.4 Score=30.23 Aligned_cols=116 Identities=7% Similarity=-0.031 Sum_probs=71.1
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCc-eEEEEecCCcEEEEc---CC---CeEEEEecCCCCEEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSR-VFARVIKQGEVMVFP---RG---LMHFQMNVGDEPATI 169 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k-~~~~~L~~GDv~~~P---~G---~~H~~~N~g~~~a~~ 169 (221)
.....+++|..+-..-.+ +..+++|++|.+.+...+++|+ .....+.+||++-.. .+ ..+..... +++.+
T Consensus 43 ~~~~~~~~ge~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~--~~~~v 119 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGNP-CTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAH--TEVHT 119 (232)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEES--SCEEE
T ss_pred cEEEEECCCCEEECCCCc-ccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEc--cceEE
Confidence 456788888765332222 5789999999999987766554 345678999987322 12 23344443 44555
Q ss_pred EEEEc-------CCCCCcee----------------------------cccch----------hcCCCCHHHHHHHhCCC
Q 048761 170 FGSFN-------SQNPGNQK----------------------------IPSAI----------FGSGIDVELLEKAFGLS 204 (221)
Q Consensus 170 l~v~s-------s~~pg~~~----------------------------~~~~l----------f~~~~p~evla~af~~~ 204 (221)
+.+-. .++|.... +...+ +.-.++.+-||.-.|++
T Consensus 120 ~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~t~~~lA~~lG~s 199 (232)
T 1zyb_A 120 VCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLDDT 199 (232)
T ss_dssp EEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHTSC
T ss_pred EEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhhcCCeEEecCCHHHHHHHhCCC
Confidence 54322 23443310 01111 11147899999999999
Q ss_pred HHHHHHhhhcC
Q 048761 205 PKQIGTMRRRF 215 (221)
Q Consensus 205 ~~~v~~l~~~~ 215 (221)
++++.++.+.+
T Consensus 200 r~tvsR~l~~l 210 (232)
T 1zyb_A 200 RLNISKTLNEL 210 (232)
T ss_dssp HHHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 99998887665
No 215
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=70.03 E-value=9.7 Score=29.31 Aligned_cols=113 Identities=13% Similarity=0.130 Sum_probs=67.6
Q ss_pred EEEecCCCcCCCccCCCC--cEEEEEEeCcEEEEEEeCCCce-EEEEecCCcEEEE----cCCCeEEEEecCCCCEEEEE
Q 048761 99 RADLRVGAINPPHFHPRA--TEIAYVVQGSVYSGFVDSSSRV-FARVIKQGEVMVF----PRGLMHFQMNVGDEPATIFG 171 (221)
Q Consensus 99 rv~l~pgg~~ppH~Hp~a--~E~~yVl~G~~~v~~~~~~~k~-~~~~L~~GDv~~~----P~G~~H~~~N~g~~~a~~l~ 171 (221)
...+++|..+-..-.+ . ..+++|++|.+.+...+++|+. ....+.+||++-. .....+..... +++.++.
T Consensus 7 ~~~~~~g~~i~~~g~~-~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~--~~~~v~~ 83 (202)
T 2zcw_A 7 TVSFKAGDVILYPGVP-GPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAA--TDVRLEP 83 (202)
T ss_dssp CEEECTTCEEECSBSC-CTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEES--SCEEEEE
T ss_pred EEEECCCCEEECCCCC-CCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEc--ccEEEEE
Confidence 3567777664322222 4 5689999999999888766653 3467899998743 11123334443 4566665
Q ss_pred EEcCC-CCCce----------------------------ecccch---------------hcCCCCHHHHHHHhCCCHHH
Q 048761 172 SFNSQ-NPGNQ----------------------------KIPSAI---------------FGSGIDVELLEKAFGLSPKQ 207 (221)
Q Consensus 172 v~ss~-~pg~~----------------------------~~~~~l---------------f~~~~p~evla~af~~~~~~ 207 (221)
+ ... .|... .+...+ +.-.++.+-||.-.|++.++
T Consensus 84 i-~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 162 (202)
T 2zcw_A 84 L-PENPDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVVLKATHDELAAAVGSVRET 162 (202)
T ss_dssp C-CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHHHTCCHHH
T ss_pred E-hHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEccCCCHHHHHHHhCCCHHH
Confidence 5 321 13220 000001 11147889999999999999
Q ss_pred HHHhhhcC
Q 048761 208 IGTMRRRF 215 (221)
Q Consensus 208 v~~l~~~~ 215 (221)
+.++.+.+
T Consensus 163 vsR~l~~L 170 (202)
T 2zcw_A 163 VTKVIGEL 170 (202)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88876654
No 216
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=69.69 E-value=8.8 Score=30.15 Aligned_cols=116 Identities=10% Similarity=0.063 Sum_probs=67.6
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCc-eEEEEecCCcEEEEc---CC--CeEEEEecCCCCEEEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSR-VFARVIKQGEVMVFP---RG--LMHFQMNVGDEPATIF 170 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k-~~~~~L~~GDv~~~P---~G--~~H~~~N~g~~~a~~l 170 (221)
.....+++|..+-..-.+ ...+++|++|.+.+...+++|+ .....+.+||++-.. .+ ..+..... +++.++
T Consensus 33 ~~~~~~~~g~~i~~~g~~-~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~v~ 109 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGDI-PNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIAV--ENSKVL 109 (232)
T ss_dssp CEEEEECTTCEEECTTCC-CCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEES--SCEEEE
T ss_pred CeEEEECCCCEEEeCCCC-CCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEEe--cceEEE
Confidence 456688888765332222 5789999999999887655544 345789999987321 12 22334443 445555
Q ss_pred EEEc-------CCCCCcee----------------------------cccc---------------hhcCCCCHHHHHHH
Q 048761 171 GSFN-------SQNPGNQK----------------------------IPSA---------------IFGSGIDVELLEKA 200 (221)
Q Consensus 171 ~v~s-------s~~pg~~~----------------------------~~~~---------------lf~~~~p~evla~a 200 (221)
.+-. .++|.... +... .+.-.++.+-||.-
T Consensus 110 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~ 189 (232)
T 2gau_A 110 AIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLSIYLSREELATL 189 (232)
T ss_dssp EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCBCTTSSBBSCCCCHHHHHHH
T ss_pred EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCcEEEcccCHHHHHHH
Confidence 4322 12443310 0101 11126889999999
Q ss_pred hCCCHHHHHHhhhcC
Q 048761 201 FGLSPKQIGTMRRRF 215 (221)
Q Consensus 201 f~~~~~~v~~l~~~~ 215 (221)
.|++++++.++.+.+
T Consensus 190 lg~sr~tvsR~l~~l 204 (232)
T 2gau_A 190 SNMTVSNAIRTLSTF 204 (232)
T ss_dssp TTSCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHH
Confidence 999999999887665
No 217
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=68.40 E-value=3.3 Score=37.09 Aligned_cols=21 Identities=19% Similarity=0.199 Sum_probs=19.0
Q ss_pred EEEecCCcEEEEcCCCeEEEE
Q 048761 140 ARVIKQGEVMVFPRGLMHFQM 160 (221)
Q Consensus 140 ~~~L~~GDv~~~P~G~~H~~~ 160 (221)
...|++||.+++|+|.+|...
T Consensus 241 ~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEE
T ss_pred EEECCCCCEEEcCCCCceEcC
Confidence 467999999999999999875
No 218
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=66.49 E-value=14 Score=30.14 Aligned_cols=52 Identities=13% Similarity=0.080 Sum_probs=37.6
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCC-c-eEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSS-R-VFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~-k-~~~~~L~~GDv~ 149 (221)
+....+++|..+-..-.+ +..+++|++|++.+.....++ + .....+.+||+|
T Consensus 180 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGEP-GDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCcc-CCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 456788888765433333 678999999999998765444 2 345789999987
No 219
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=65.78 E-value=8.8 Score=27.40 Aligned_cols=48 Identities=15% Similarity=0.186 Sum_probs=32.6
Q ss_pred EEEEEec-CCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 97 FVRADLR-VGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~-pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
+....++ +|..+-.. ...+..+++|++|++.+.. .+|+. ..+.+||++
T Consensus 39 ~~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~--~~g~~--~~l~~G~~f 87 (134)
T 2d93_A 39 MIFEVVEQAGAIILED-GQELDSWYVILNGTVEISH--PDGKV--ENLFMGNSF 87 (134)
T ss_dssp EEEEEECSSSCEEECT-TCEECEEEECCBSCEEEEC--SSSCE--EEECTTCEE
T ss_pred heEEEecCCCCEEEeC-CCCCCeEEEEEeCEEEEEc--CCCcE--EEecCCCcc
Confidence 3456777 77654221 2225679999999999763 45664 679999976
No 220
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=64.67 E-value=18 Score=26.25 Aligned_cols=48 Identities=15% Similarity=0.136 Sum_probs=32.9
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEE
Q 048761 98 VRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMV 150 (221)
Q Consensus 98 ~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~ 150 (221)
....+++|..+-..=- .+..+++|++|++.+... + .....+.+||++-
T Consensus 51 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~---~-~~~~~~~~G~~fG 98 (160)
T 4f8a_A 51 QTVHCAPGDLIYHAGE-SVDSLCFVVSGSLEVIQD---D-EVVAILGKGDVFG 98 (160)
T ss_dssp EEEEECTTCEEECTTS-BCCEEEEEEESEEEEEET---T-EEEEEEETTCEEE
T ss_pred eeeeeCCCCEEEeCCC-CccEEEEEEeeEEEEEEC---C-EEEEEecCCCEeC
Confidence 3467778766422212 257899999999998652 2 3457899999874
No 221
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=61.68 E-value=25 Score=25.61 Aligned_cols=48 Identities=10% Similarity=0.083 Sum_probs=33.9
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
+....+++|..+-..=.+ +..+++|++|.+.+.. +++. ...+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~---~~~~-~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYV---NNEW-ATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEESCEEEEE---TTEE-EEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEE---CCEE-EEEecCCCEe
Confidence 445678888765322222 6789999999999876 2453 4679999986
No 222
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=61.19 E-value=19 Score=25.69 Aligned_cols=48 Identities=8% Similarity=-0.033 Sum_probs=33.2
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
+....+++|..+-.-=. .+..+++|++|++.+.- +++ ....+.+||++
T Consensus 46 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~---~g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 46 MYPVEYGKDSCIIKEGD-VGSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVF 93 (139)
T ss_dssp CEEEEECSSCEEECTTS-CCCEEEEEEECCEEEEE---TTE-EEEEECTTCEE
T ss_pred cEEEecCCCCEEEeCCC-cCCEEEEEEeCEEEEEE---CCE-EEEEeCCCCEe
Confidence 34567888876532222 36789999999999843 355 35788999986
No 223
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=61.10 E-value=16 Score=32.07 Aligned_cols=54 Identities=19% Similarity=0.027 Sum_probs=38.7
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCc---eEEEEecCCcEEEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSR---VFARVIKQGEVMVF 151 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k---~~~~~L~~GDv~~~ 151 (221)
+....+++|..+-..-. .+..+++|++|++.+...+.+|+ .....+.+||+|-.
T Consensus 65 ~~~~~~~~g~~i~~~Gd-~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFRQGD-IGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEeCCC-CCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 44568888876522212 25789999999999988766653 45678999998843
No 224
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=59.78 E-value=28 Score=27.34 Aligned_cols=64 Identities=14% Similarity=0.156 Sum_probs=45.6
Q ss_pred CCccCCCCcEEEEEEeCcEEEEEEeCCC------ceEEEEecCCcEEEEcCCCeEEEEecCCCCEEEEEE
Q 048761 109 PPHFHPRATEIAYVVQGSVYSGFVDSSS------RVFARVIKQGEVMVFPRGLMHFQMNVGDEPATIFGS 172 (221)
Q Consensus 109 ppH~Hp~a~E~~yVl~G~~~v~~~~~~~------k~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~v 172 (221)
..-.||..+|.+.-+.|.-.+-++-+++ +...+....|+.+.+-+|++|.-.-.-+++..++.+
T Consensus 70 ~lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~~F~vv 139 (168)
T 1xsq_A 70 ELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTI 139 (168)
T ss_dssp EEEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSSCEEEEEE
T ss_pred EEeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCCcceEEEE
Confidence 3556888999999999986644443322 445789999999999999999954333455666633
No 225
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=59.33 E-value=9.4 Score=33.52 Aligned_cols=32 Identities=16% Similarity=0.293 Sum_probs=26.1
Q ss_pred EEEEecCCcEEEEcCCCeEEEEecCCCCEEEE
Q 048761 139 FARVIKQGEVMVFPRGLMHFQMNVGDEPATIF 170 (221)
Q Consensus 139 ~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 170 (221)
+...=++||.+++++|..||.+|.|-.-.+..
T Consensus 279 yr~~QkpGd~Vi~~PgayH~v~n~G~~~n~aw 310 (332)
T 2xxz_A 279 YRFVQRPGDLVWINAGTVHWVQATGWCNNIAW 310 (332)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred EEEEECCCCEEEECCCceEEEEecceeeEEEE
Confidence 35777999999999999999999996444433
No 226
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=58.59 E-value=33 Score=27.11 Aligned_cols=79 Identities=16% Similarity=0.119 Sum_probs=51.6
Q ss_pred ceEEEEEEecCC--CcCCCccCCCCcEEEEEEeCcEEEEEEeCCC------ceEEEEecCCcEEEEcCCCeEEEEecCCC
Q 048761 94 GMSFVRADLRVG--AINPPHFHPRATEIAYVVQGSVYSGFVDSSS------RVFARVIKQGEVMVFPRGLMHFQMNVGDE 165 (221)
Q Consensus 94 g~s~~rv~l~pg--g~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~------k~~~~~L~~GDv~~~P~G~~H~~~N~g~~ 165 (221)
++++.|..-.+. .+...-.||..+|.+.-+.|.-.+-++-+++ +...+....|+.+.+-+|++|.-.-.-++
T Consensus 55 ~isifr~~~r~~p~~v~~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~ 134 (175)
T 2bdr_A 55 IISIFRADAQDMPLTVRMLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEK 134 (175)
T ss_dssp EEEEEEEECCCSSEEECEEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSS
T ss_pred EEEEEEccccCCCceeeEEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCC
Confidence 355555432222 2234566888999999999986555544432 45679999999999999999974333334
Q ss_pred CEEEEEE
Q 048761 166 PATIFGS 172 (221)
Q Consensus 166 ~a~~l~v 172 (221)
+..++.+
T Consensus 135 ~~dF~vv 141 (175)
T 2bdr_A 135 RDDFLVV 141 (175)
T ss_dssp EEEEEEE
T ss_pred CceEEEE
Confidence 5555543
No 227
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=57.85 E-value=6.2 Score=35.89 Aligned_cols=21 Identities=19% Similarity=0.218 Sum_probs=18.7
Q ss_pred EEecCCcEEEEcCCCeEEEEe
Q 048761 141 RVIKQGEVMVFPRGLMHFQMN 161 (221)
Q Consensus 141 ~~L~~GDv~~~P~G~~H~~~N 161 (221)
..|++||.+++|+|.+|....
T Consensus 268 v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 268 VGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEECTTCEEEECTTCCEEEEE
T ss_pred EecCCCCEEecCCCCccccCC
Confidence 459999999999999998754
No 228
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=57.65 E-value=25 Score=30.95 Aligned_cols=51 Identities=4% Similarity=-0.088 Sum_probs=36.3
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCc-eEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSR-VFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k-~~~~~L~~GDv~ 149 (221)
+....+++|..+-..=.+ +..+++|++|++.+... .+|+ .....+.+||+|
T Consensus 168 ~~~~~~~~Ge~I~~qGd~-~d~~YiI~sG~v~v~~~-~~G~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGDD-GDNFYVIDRGTFDIYVK-CDGVGRCVGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEECEEEEEEE-CSSCEEEEEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCCC-CceEEEEEeeEEEEEEe-cCCCEEEEEEecCCCEE
Confidence 456788888765433333 68899999999998874 3443 335679999977
No 229
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=56.86 E-value=13 Score=26.40 Aligned_cols=45 Identities=20% Similarity=0.225 Sum_probs=31.6
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 98 VRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 98 ~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
....+++|..+-..-.+ ...+++|++|++.+... ++ ..+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~---~~---~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGEP-GDRMFFVVEGSVSVATP---NP---VELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESCEEECSS---SC---EEECTTCEE
T ss_pred cEEEeCCCCEEEeCCCC-cceEEEEEeeEEEEEeC---Cc---ceECCCCEe
Confidence 45688888765333232 57899999999998643 22 578888876
No 230
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=55.12 E-value=22 Score=29.09 Aligned_cols=52 Identities=17% Similarity=0.220 Sum_probs=36.3
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEe-CCCc-eEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVD-SSSR-VFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~-~~~k-~~~~~L~~GDv~ 149 (221)
+....+++|..+-..-- .+..+++|++|++.+.... .+|+ .....+.+||+|
T Consensus 180 ~~~~~~~~g~~I~~~G~-~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 180 LEETHYENGEYIIRQGA-RGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp CEEEEECTTCEEECTTC-EECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred ccEEEECCCCEEEeCCC-CCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 35567888876532222 2578999999999998875 3343 345789999987
No 231
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=52.55 E-value=21 Score=27.68 Aligned_cols=49 Identities=12% Similarity=0.074 Sum_probs=34.5
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMV 150 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~ 150 (221)
+....+.||..+-..--+ +.++.+|++|++.+... +. ....+.+||++-
T Consensus 98 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~~---~~-~~~~l~~G~~fG 146 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQGDA-LQAIYFVCSGSMEVLKD---NT-VLAILGKGDLIG 146 (212)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEESS---SC-EEEEECTTCEEE
T ss_pred hheEEeCCCCEEEECCCc-ccEEEEEEecEEEEEEC---Ce-EEEEecCCCCcC
Confidence 445678888765322222 67899999999998742 43 357899999874
No 232
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=50.63 E-value=33 Score=27.74 Aligned_cols=48 Identities=10% Similarity=0.126 Sum_probs=34.7
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
+....+++|..+-..-.+ +..+++|++|++.+.. +|+ ....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~---~g~-~~~~l~~G~~f 109 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYV---NNE-WATSVGEGGSF 109 (291)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEEE---TTE-EEEEECTTCEE
T ss_pred ccEEEECCCCEEEeCCCC-CceEEEEeeeEEEEEE---CCe-EEEEcCCCCcc
Confidence 355678888765333233 6789999999999876 244 35789999987
No 233
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=48.96 E-value=4.4 Score=29.01 Aligned_cols=49 Identities=12% Similarity=0.173 Sum_probs=29.5
Q ss_pred EEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceE-EE--EecCCcEE
Q 048761 99 RADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVF-AR--VIKQGEVM 149 (221)
Q Consensus 99 rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~-~~--~L~~GDv~ 149 (221)
...+++|..+-.. ......+++|++|++.+. ...+|+.. .. .+.+||++
T Consensus 31 ~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 31 PCLFTEKSYLVRE-GDPVNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CCCBCTTEEEECT-TSBCSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBS
T ss_pred EEEeCCCCEEEeC-CCCCCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEe
Confidence 3456666544221 122578999999999964 44445421 12 78899975
No 234
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=48.41 E-value=21 Score=27.93 Aligned_cols=47 Identities=13% Similarity=-0.015 Sum_probs=33.5
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 98 VRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 98 ~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
....+++|..+-..=.+ ++.+++|++|++.+... ++. ...+.+||++
T Consensus 31 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~v~~~---~~~-~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQGDQ-GDYFYVVEKGTVDFYVN---DNK-VNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECTTCC-CCEEEEEEECCEEEEST---TSC-CEEECTTCEE
T ss_pred ceEEECCCCEEEecCCC-CCEEEEEEeeEEEEEEC---CEE-EEecCCCCee
Confidence 45678888765332233 68999999999998752 343 3789999997
No 235
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=47.95 E-value=37 Score=26.43 Aligned_cols=49 Identities=8% Similarity=0.008 Sum_probs=33.6
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
+....+++|..+-..-- .+..+++|++|++.+..... + ....+.+||++
T Consensus 148 ~~~~~~~~g~~i~~~g~-~~~~~y~I~~G~v~v~~~~~-~--~~~~l~~g~~f 196 (246)
T 3of1_A 148 LDTKIYQPGETIIREGD-QGENFYLIEYGAVDVSKKGQ-G--VINKLKDHDYF 196 (246)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECEEEEEETTT-E--EEEEEETTCEE
T ss_pred hheEEeCCCCEEEeCCC-cCCEEEEEEecEEEEEEcCC-c--eEEEcCCCCcc
Confidence 34567788876533222 26789999999999876432 1 35789999986
No 236
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=47.90 E-value=9 Score=29.84 Aligned_cols=116 Identities=15% Similarity=0.150 Sum_probs=68.5
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCc-eEEEEecCCcEEEEcC---CCe---EEEEecCCCCEEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSR-VFARVIKQGEVMVFPR---GLM---HFQMNVGDEPATI 169 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k-~~~~~L~~GDv~~~P~---G~~---H~~~N~g~~~a~~ 169 (221)
+....+++|..+-..-.+ ...+++|++|.+.+...+++|+ .....+.+||++-... +.+ +..... +++.+
T Consensus 32 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~v 108 (227)
T 3dkw_A 32 SDLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAV--VPSQL 108 (227)
T ss_dssp CEEEECCTTEEEECTTSB-CCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCTTTTTTCSBCSSCEEES--SCCEE
T ss_pred CEEEEECCCCEEEcCCCc-cceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEc--CcEEE
Confidence 345577787765332222 5789999999999887665543 2346788999874321 222 223333 34444
Q ss_pred EEEEc-------CCCCCcee----------------------------cc-------cc------hhcCCCCHHHHHHHh
Q 048761 170 FGSFN-------SQNPGNQK----------------------------IP-------SA------IFGSGIDVELLEKAF 201 (221)
Q Consensus 170 l~v~s-------s~~pg~~~----------------------------~~-------~~------lf~~~~p~evla~af 201 (221)
+.+-. .++|.... +. .. .+.-.++.+-||.-.
T Consensus 109 ~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~~~~~t~~~lA~~l 188 (227)
T 3dkw_A 109 FRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLAAHAPGENCRVEIPVAKQLVAGHL 188 (227)
T ss_dssp EEEESHHHHHHHSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSSCCCCCCCSCTHHHHHHT
T ss_pred EEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCCCeEEEecCCHHHHHHHh
Confidence 43322 24564410 00 11 012257889999999
Q ss_pred CCCHHHHHHhhhcC
Q 048761 202 GLSPKQIGTMRRRF 215 (221)
Q Consensus 202 ~~~~~~v~~l~~~~ 215 (221)
|++++++.++.+.+
T Consensus 189 g~sr~tvsR~l~~l 202 (227)
T 3dkw_A 189 SIQPETFSRIMHRL 202 (227)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99999998887654
No 237
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=47.35 E-value=39 Score=28.84 Aligned_cols=65 Identities=14% Similarity=0.132 Sum_probs=45.3
Q ss_pred ceEEEEEEecCCCcCC-CccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEE-------EEecCCC
Q 048761 94 GMSFVRADLRVGAINP-PHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHF-------QMNVGDE 165 (221)
Q Consensus 94 g~s~~rv~l~pgg~~p-pH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~-------~~N~g~~ 165 (221)
|.....+.+.||.... .-.|+ ..|=+|+++|.+ ..|+.++-|+|+.|. -+- .+.
T Consensus 216 G~~TrLlr~~Pg~dt~~v~iHd-y~EEvY~LeG~~----------------d~G~Y~~RPpg~~HGps~~~~ppf~-Se~ 277 (303)
T 2qdr_A 216 GGGVWLLAILPHFDNKYQMIQP-YNEEGYCLTGYC----------------DVGDYRIVKDHYWYCPSFSTLPRHI-TDD 277 (303)
T ss_dssp SCEEEEEEECSSEECCSEEEEC-SCEEEEEEEEEE----------------EETTEEEETTEEEEECTTEEECCEE-ESS
T ss_pred CCeEEEEEECCCCCCCCceeec-cceeEEEEeeec----------------cCceeeEcCCCCccCccccCCCCcC-cCC
Confidence 5566777888886653 34465 567789999976 238899999999998 332 356
Q ss_pred CEEEEEEEcCC
Q 048761 166 PATIFGSFNSQ 176 (221)
Q Consensus 166 ~a~~l~v~ss~ 176 (221)
.+.++.-.+.+
T Consensus 278 G~l~fvR~Dgd 288 (303)
T 2qdr_A 278 GGLFFVRVDRD 288 (303)
T ss_dssp CEEEEEEESSC
T ss_pred ceEEEEEeCcc
Confidence 67777665544
No 238
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=43.19 E-value=33 Score=31.98 Aligned_cols=32 Identities=13% Similarity=0.322 Sum_probs=26.1
Q ss_pred EEEEecCCcEEEEcCCCeEEEEecCCCCEEEE
Q 048761 139 FARVIKQGEVMVFPRGLMHFQMNVGDEPATIF 170 (221)
Q Consensus 139 ~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 170 (221)
+...=++||.+++++|..||.+|.|-.-.+..
T Consensus 338 yr~vQkpGd~Vi~~PgayH~v~n~G~~~n~aw 369 (531)
T 3avr_A 338 YRFIQRPGDLVWINAGTVHWVQAIGWCNNIAW 369 (531)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred EEEEECCCCEEEECCCceEEEEecceeeeeEE
Confidence 35778999999999999999999996444333
No 239
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=43.07 E-value=23 Score=32.81 Aligned_cols=29 Identities=17% Similarity=0.298 Sum_probs=24.6
Q ss_pred EEEEecCCcEEEEcCCCeEEEEecCCCCE
Q 048761 139 FARVIKQGEVMVFPRGLMHFQMNVGDEPA 167 (221)
Q Consensus 139 ~~~~L~~GDv~~~P~G~~H~~~N~g~~~a 167 (221)
+...=++||.+++++|..||.+|.|-..-
T Consensus 313 yr~iQkPGdfVit~PgtyH~Vqs~Gf~~n 341 (510)
T 4ask_A 313 YRFVQRPGDLVWINAGTVHWVQATGWCNN 341 (510)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEE
T ss_pred EEEEECCCCEEEECCCceEEEEecCeeee
Confidence 35777999999999999999999986433
No 240
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=42.15 E-value=35 Score=27.82 Aligned_cols=48 Identities=8% Similarity=-0.031 Sum_probs=34.4
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
+....+++|..+-..-.+ +..+++|++|++.+.. +|+ ....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~---~g~-~~~~~~~G~~f 109 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGDV-GSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVF 109 (299)
T ss_dssp CEEEEECTTCEEECTTCB-CCCEEEEEESCEEEEE---TTE-EEEEECTTCEE
T ss_pred cCeEEECCCCEEEcCCCc-CceEEEEEEEEEEEEE---CCE-EEEEeCCCCee
Confidence 445788888765333333 6789999999999843 244 35789999987
No 241
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=40.26 E-value=1.3e+02 Score=25.76 Aligned_cols=65 Identities=11% Similarity=0.205 Sum_probs=40.1
Q ss_pred EecCCCcCCCccCCCCcEE-EEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecC--CCCEEEE
Q 048761 101 DLRVGAINPPHFHPRATEI-AYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVG--DEPATIF 170 (221)
Q Consensus 101 ~l~pgg~~ppH~Hp~a~E~-~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g--~~~a~~l 170 (221)
+|++|......+-....|+ ++.+.|.+.+.+. |+. +.|..-|.+++|+|.--...... ..++.+.
T Consensus 63 ~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~vd---g~~--f~lg~~dalYVp~G~~~v~~as~d~~~~a~fa 130 (289)
T 1ywk_A 63 EIILDKELGVDYFLERRELGVINIGGPGFIEID---GAK--ETMKKQDGYYIGKETKHVRFSSENPDNPAKFY 130 (289)
T ss_dssp ECCCSGGGTSSSTTTTEEEEEEECSSCEEEEET---TEE--EEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred EcCCCceecccccCCCcEEEEEEccCeEEEEEC---CEE--EecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 4555543333322234555 5567889998875 554 68999999999999765544422 3455544
No 242
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=39.34 E-value=54 Score=27.99 Aligned_cols=50 Identities=12% Similarity=0.160 Sum_probs=34.5
Q ss_pred CcEE-EEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCCCeEEEEecC--CCCEEEE
Q 048761 116 ATEI-AYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMHFQMNVG--DEPATIF 170 (221)
Q Consensus 116 a~E~-~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H~~~N~g--~~~a~~l 170 (221)
..|+ ++.+.|.+.+.+. |+. +.|..-|.+++|+|.-....... ..++++.
T Consensus 78 ~rE~~iV~l~G~~~V~vd---G~~--f~lg~~dalYVp~g~~~v~~as~da~~~a~fa 130 (282)
T 1xru_A 78 RRELGVINIGGAGTITVD---GQC--YEIGHRDALYVGKGAKEVVFASIDTGTPAKFY 130 (282)
T ss_dssp TEEEEEEECSSCEEEEET---TEE--EEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred CcEEEEEEccCeEEEEEC---CEE--EecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 3554 5567889998875 554 68999999999999865544432 3355554
No 243
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=38.79 E-value=48 Score=28.61 Aligned_cols=49 Identities=8% Similarity=0.015 Sum_probs=33.3
Q ss_pred EEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCc--eEEEEecCCcEE
Q 048761 100 ADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSR--VFARVIKQGEVM 149 (221)
Q Consensus 100 v~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k--~~~~~L~~GDv~ 149 (221)
..+.+|..+-.--. .+..+++|++|++.+.....+++ .....+.+||+|
T Consensus 274 ~~~~~ge~I~~eGd-~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQGE-PGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCTTS-BCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeCCC-cCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 45666665433223 26789999999999987654432 235789999987
No 244
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=37.45 E-value=68 Score=25.80 Aligned_cols=35 Identities=9% Similarity=0.043 Sum_probs=27.2
Q ss_pred CcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCC
Q 048761 116 ATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRG 154 (221)
Q Consensus 116 a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G 154 (221)
..-++|+++|++.+... +++ ...|.+||.+.+-..
T Consensus 140 ~~~~v~~l~G~~~v~~~--~~~--~~~L~~~d~l~~~~~ 174 (200)
T 1yll_A 140 STLLLFAQQDGVAISLQ--GQP--RGQLAAHDCLCAEGL 174 (200)
T ss_dssp SEEEEEESSSCEEEEET--TEE--EEEECTTCEEEEESC
T ss_pred CEEEEEEccCcEEEEcC--CCc--eeecCCCCEEEEeCC
Confidence 46799999999998652 123 489999999998654
No 245
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=36.06 E-value=55 Score=28.58 Aligned_cols=46 Identities=13% Similarity=0.150 Sum_probs=33.0
Q ss_pred EEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 100 ADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 100 v~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
..+++|..+-..=.+ +..+++|++|++.+... ++.....+.+||+|
T Consensus 364 ~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~~---~~~~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGEE-GTSWYIILKGSVNVVIY---GKGVVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTSC-CCEEEEEEESEEEEEET---TTEEEEEEETTCEE
T ss_pred eEecCCCEEEeCCCc-CCeEEEEEEeEEEEEEc---CCeeEEEecCCCEE
Confidence 478888765333233 67899999999998753 33345789999977
No 246
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=33.35 E-value=1.1e+02 Score=23.08 Aligned_cols=53 Identities=13% Similarity=0.118 Sum_probs=37.1
Q ss_pred CCCccCCCCcEEEEEEeCcEEEEEEeCCC---------------------ceEEEEecCCcEEEEcCCCeEEEE
Q 048761 108 NPPHFHPRATEIAYVVQGSVYSGFVDSSS---------------------RVFARVIKQGEVMVFPRGLMHFQM 160 (221)
Q Consensus 108 ~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~---------------------k~~~~~L~~GDv~~~P~G~~H~~~ 160 (221)
..+-.|-+--.+-|+++|+=.+++....+ ......|++|+.++|-++-+|.-.
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~ 133 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPC 133 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCcccccc
Confidence 34556766788999999977777653111 001367899999999999999853
No 247
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=32.78 E-value=51 Score=28.90 Aligned_cols=52 Identities=13% Similarity=-0.027 Sum_probs=33.6
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC------C-ceEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS------S-RVFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~------~-k~~~~~L~~GDv~ 149 (221)
+....+.+|..+-.--. .+..+++|++|++.+.....+ | +.....+.+||+|
T Consensus 290 l~~~~~~~Ge~I~~eGd-~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQGD-LADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCC-cCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 45567888876532222 368899999999998765442 2 2235788999987
No 248
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=29.67 E-value=94 Score=30.49 Aligned_cols=55 Identities=16% Similarity=0.057 Sum_probs=38.5
Q ss_pred ceEEEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCC---CceEEEEecCCcEE
Q 048761 94 GMSFVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSS---SRVFARVIKQGEVM 149 (221)
Q Consensus 94 g~s~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~---~k~~~~~L~~GDv~ 149 (221)
--.+....+++|..+=.-=.+ ++.+++|++|++.+.+..++ .......+.+||.|
T Consensus 62 ~~~m~ye~~~~Ge~IfrqGd~-gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sF 119 (999)
T 4f7z_A 62 CLCGYYENLEKGITLFRQGDI-GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAF 119 (999)
T ss_dssp HHHCEEEEECTTCEEECTTSC-CCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEE
T ss_pred HhheEEEEECCCCEEEcCCCc-CCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcch
Confidence 345666788888765322244 78999999999999876433 23335789999987
No 249
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=29.67 E-value=66 Score=26.57 Aligned_cols=63 Identities=11% Similarity=0.179 Sum_probs=39.1
Q ss_pred EEEEEEecCCCcCCCccCCC------------CcEEEEEEe------CcEEEEEEeCCCceEEEEecCCcEEEEcCCCeE
Q 048761 96 SFVRADLRVGAINPPHFHPR------------ATEIAYVVQ------GSVYSGFVDSSSRVFARVIKQGEVMVFPRGLMH 157 (221)
Q Consensus 96 s~~rv~l~pgg~~ppH~Hp~------------a~E~~yVl~------G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G~~H 157 (221)
.+....+.+|+...+|+-.. .+=++|.-+ |++.+ .+..+ ......++|++++||.+..|
T Consensus 100 ~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf--~~~~~-~~~V~P~~G~~v~F~s~~lH 176 (243)
T 3dkq_A 100 PPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVI--QDTYG-QQSIKLSAGSLVLYPSSSLH 176 (243)
T ss_dssp EEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEE--EETTE-EEEECCCTTCEEEEETTSEE
T ss_pred cceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEE--eeCCC-cEEEecCCCEEEEECCCCeE
Confidence 35567889999888886431 111223222 34432 22211 23567899999999999999
Q ss_pred EEEe
Q 048761 158 FQMN 161 (221)
Q Consensus 158 ~~~N 161 (221)
...-
T Consensus 177 ~v~p 180 (243)
T 3dkq_A 177 QVTP 180 (243)
T ss_dssp EECC
T ss_pred cCcc
Confidence 8754
No 250
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=28.34 E-value=82 Score=17.52 Aligned_cols=29 Identities=7% Similarity=0.001 Sum_probs=24.3
Q ss_pred CCCCHHHHHHHhCCCHHHHHHhhhcCCCC
Q 048761 190 SGIDVELLEKAFGLSPKQIGTMRRRFDPK 218 (221)
Q Consensus 190 ~~~p~evla~af~~~~~~v~~l~~~~~~~ 218 (221)
.+++..-+|+.++++..+|.+..+.+...
T Consensus 20 ~g~s~~~IA~~lgis~~Tv~~~~~~~~~~ 48 (51)
T 1tc3_C 20 LNVSLHEMSRKISRSRHCIRVYLKDPVSY 48 (51)
T ss_dssp TTCCHHHHHHHHTCCHHHHHHHHHCSTTT
T ss_pred cCCCHHHHHHHHCcCHHHHHHHHhhHHhc
Confidence 37888899999999999999987776543
No 251
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=25.77 E-value=72 Score=27.45 Aligned_cols=48 Identities=15% Similarity=0.038 Sum_probs=35.3
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 97 FVRADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 97 ~~rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
+....+++|..+-..=.+ +..+++|++|++.+... ++. ...+.+||+|
T Consensus 153 ~~~~~~~~ge~I~~~Gd~-~~~~yiI~~G~v~v~~~---~~~-v~~l~~G~~f 200 (381)
T 4din_B 153 MFPVTHIAGETVIQQGNE-GDNFYVVDQGEVDVYVN---GEW-VTNISEGGSF 200 (381)
T ss_dssp CEEEECCTTCBSSCTTSB-CCEEEECSSSEEEEEET---TEE-EEEEESSCCB
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEeeEEEEEEC---CeE-eeeCCCCCEE
Confidence 556788888876444343 68899999999998752 443 4679999986
No 252
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.33 E-value=35 Score=23.85 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=25.7
Q ss_pred cccchhcCCCCHHHHHHHhCCCHHHHHHhhhcC
Q 048761 183 IPSAIFGSGIDVELLEKAFGLSPKQIGTMRRRF 215 (221)
Q Consensus 183 ~~~~lf~~~~p~evla~af~~~~~~v~~l~~~~ 215 (221)
+..++|- .+++|+|..-|+++.-+++||.+-+
T Consensus 45 IDG~lL~-~L~ee~L~edf~ls~Lq~kKi~~fI 76 (84)
T 2dkz_A 45 IDGNLLV-QLTEEILSEDFKLSKLQVKKIMQFI 76 (84)
T ss_dssp CCHHHHH-HCCHHHHHHTSCCCHHHHHHHHHHH
T ss_pred cchHHHH-hCCHHHHHhhcCCCHHHHHHHHHHH
Confidence 3345555 7999999999999999999997643
No 253
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=23.49 E-value=2.6e+02 Score=24.69 Aligned_cols=74 Identities=22% Similarity=0.206 Sum_probs=51.9
Q ss_pred EEEecC---------CcEEEEcCCCeEEEEecCCCCEEEEEEEcCCCCCc--------e-------------------ec
Q 048761 140 ARVIKQ---------GEVMVFPRGLMHFQMNVGDEPATIFGSFNSQNPGN--------Q-------------------KI 183 (221)
Q Consensus 140 ~~~L~~---------GDv~~~P~G~~H~~~N~g~~~a~~l~v~ss~~pg~--------~-------------------~~ 183 (221)
...|++ ||.++-|.-.+|...-.++.|+++++--...|-.. + .+
T Consensus 156 wr~l~~~~~~~~w~~gdsyveps~cphty~l~~d~parivsyt~~s~l~~l~~e~n~w~~~a~e~~l~~l~~~~aagv~L 235 (443)
T 3g7d_A 156 WRVLHANHGGDRWITGDSYVEPSYCPHSYSLAGDAPARIVSYTAQSNISPLMTEANNWSTGAFEEALKALSGKVSAGSVL 235 (443)
T ss_dssp EEEECBCCSSCTTSCBCEEEECTTCCCEEEESSSSCEEEEEEECCCTTHHHHHHHTTSCHHHHHHHHHHHSSCCCHHHHH
T ss_pred heeeccCCCCCccccCCcccccccCCcccccccCCchheEeeccccchHHHHHhhcccccHHHHHHHHhhcccchHHHHH
Confidence 366777 99999999999999999999999985543322100 0 00
Q ss_pred ccchhcCCCCHHHHHHHhCCCHHHHHHhhh
Q 048761 184 PSAIFGSGIDVELLEKAFGLSPKQIGTMRR 213 (221)
Q Consensus 184 ~~~lf~~~~p~evla~af~~~~~~v~~l~~ 213 (221)
...+-+.++..+=|++..|+..+.+..+..
T Consensus 236 R~ar~ReglTQ~~LAe~TGIPq~hISeMen 265 (443)
T 3g7d_A 236 DLFLARRAHTRTSAAEAAGVPPADLEAALR 265 (443)
T ss_dssp HHHHHHTTCCHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHhCCCHHHHHHHhc
Confidence 111222378899999999999888866643
No 254
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=23.41 E-value=1.1e+02 Score=29.02 Aligned_cols=47 Identities=13% Similarity=0.156 Sum_probs=33.3
Q ss_pred EEEecCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 99 RADLRVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 99 rv~l~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
...+++|..+-..=- .+..+.+|++|.+.+... ++.....+.+||++
T Consensus 58 ~~~~~kGe~I~~eGd-~~~~lyiIlsG~V~v~~~---g~~il~~l~~Gd~f 104 (694)
T 3cf6_E 58 ESHAKGGTVLFNQGE-EGTSWYIILKGSVNVVIY---GKGVVCTLHEGDDF 104 (694)
T ss_dssp EEECSTTCEEECTTS-BCCEEEEEEESEEEEEET---TTEEEEEEETTCEE
T ss_pred EEEECCCCEEECCCC-cCCeEEEEEEEEEEEEEe---CCEEEEEeCCCCEe
Confidence 457888876532222 257899999999998764 33345789999977
No 255
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=23.31 E-value=83 Score=30.87 Aligned_cols=43 Identities=14% Similarity=0.158 Sum_probs=28.5
Q ss_pred cCCCcCCCccCCCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEE
Q 048761 103 RVGAINPPHFHPRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVM 149 (221)
Q Consensus 103 ~pgg~~ppH~Hp~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~ 149 (221)
+.|..+--+= ..++.+.+|++|++.|... ++....+|++||.|
T Consensus 367 kaGtvI~rQG-E~gds~YIIlsG~V~V~~~---~~~~v~~L~~Gd~F 409 (999)
T 4f7z_A 367 KGGTVLFNQG-EEGTSWYIILKGSVNVVIY---GKGVVCTLHEGDDF 409 (999)
T ss_dssp STTCEEECTT-SBCCEEEEEEESEEEEEET---TTEEEEEEETTCEE
T ss_pred cCCCEEEeCC-CcCCeEEEEEeeEEEEEEc---CCcceEEecCCCcc
Confidence 4454433222 2367899999999987643 33335789999998
No 256
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=22.32 E-value=2.1e+02 Score=20.20 Aligned_cols=48 Identities=19% Similarity=0.222 Sum_probs=27.5
Q ss_pred CCCcCCCccC-CCCcEEEEEEeCcEEEEEEeCCCceEEEEecCCcEEEEcCC
Q 048761 104 VGAINPPHFH-PRATEIAYVVQGSVYSGFVDSSSRVFARVIKQGEVMVFPRG 154 (221)
Q Consensus 104 pgg~~ppH~H-p~a~E~~yVl~G~~~v~~~~~~~k~~~~~L~~GDv~~~P~G 154 (221)
.||+..|-+- ....+--.|--|.+.. ..+|+.....++.||.++|++|
T Consensus 22 ~gGI~LP~sakeKp~~G~VvAVG~G~~---~~~G~~~p~~VkvGD~Vlf~k~ 70 (97)
T 1pcq_O 22 AGGIVLTGSAAAKSTRGEVLAVGNGRI---LENGEVKPLDVKVGDIVIFNDG 70 (97)
T ss_dssp TTSSCCCCCCSCCCCEEEEEEECSEEC---TTSSSCEECSCCTTCEEEECCC
T ss_pred cceEEeCcccccCCcccEEEEEcCcee---cCCCCEEecccCCCCEEEECCc
Confidence 3555544332 2223333344466642 3346655567999999999993
No 257
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=20.85 E-value=96 Score=25.66 Aligned_cols=40 Identities=23% Similarity=0.225 Sum_probs=27.5
Q ss_pred ceEEEEecCCcEEEEcCCCeEEEE-ecCCC-CEEEEEEEcCC
Q 048761 137 RVFARVIKQGEVMVFPRGLMHFQM-NVGDE-PATIFGSFNSQ 176 (221)
Q Consensus 137 k~~~~~L~~GDv~~~P~G~~H~~~-N~g~~-~a~~l~v~ss~ 176 (221)
+.....+++||++++-..++|.-. |.++. +..+...|...
T Consensus 214 ~~v~~~~~aGd~vlf~~~~~H~s~~N~s~~~R~~~~~~y~~~ 255 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASA 255 (308)
T ss_dssp CCEEECBCTTCEEEECTTCCEEECCBCSSSCEEEEEEEEEET
T ss_pred CeEEccCCCccEEEECCCccccCCCCCCCCceEEEEEEEECC
Confidence 334688999999999999999964 65543 33333344443
No 258
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=20.24 E-value=86 Score=25.64 Aligned_cols=27 Identities=15% Similarity=0.373 Sum_probs=22.5
Q ss_pred eEEEEecCCcEEEEcCCCeEEEE-ecCC
Q 048761 138 VFARVIKQGEVMVFPRGLMHFQM-NVGD 164 (221)
Q Consensus 138 ~~~~~L~~GDv~~~P~G~~H~~~-N~g~ 164 (221)
.....+++||++++-..++|.-. |.++
T Consensus 227 ~v~~~~~aGd~~~f~~~~~H~s~~N~s~ 254 (291)
T 2opw_A 227 FVPTPVQRGALVLIHGEVVHKSKQNLSD 254 (291)
T ss_dssp CEEECBCTTCEEEEETTCEEEECCBCSS
T ss_pred eeecccCCCcEEEEcCCceecCCCCCCC
Confidence 44689999999999999999975 6554
Done!