BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048764
(295 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224080794|ref|XP_002306233.1| predicted protein [Populus trichocarpa]
gi|222849197|gb|EEE86744.1| predicted protein [Populus trichocarpa]
Length = 557
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/302 (61%), Positives = 224/302 (74%), Gaps = 15/302 (4%)
Query: 7 ANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLY 66
A+P+ KK K+N PE+ F +L +KSKDL +AISLY++A+S N RL+ H+FN LLY
Sbjct: 2 ASPAN-KKKPKSNQTPESQFSYNLNFYSKSKDLHSAISLYDTAISQNTRLNQHNFNTLLY 60
Query: 67 LCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKR 126
LCS S DPS KD +L++GFRVFD M+SN + PNEA +T+VARLAA+K D DYAF+L+K
Sbjct: 61 LCSISLNDPSTKDLSLQYGFRVFDHMVSNGIKPNEASITAVARLAAAKGDGDYAFDLVKN 120
Query: 127 MNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKVSAGTG 173
+ +N +PRLRTYDPALFC+CE LE KAYE E EI ALLKVS T
Sbjct: 121 IG-VYNELPRLRTYDPALFCYCEKLEGDKAYEVEEHMRRIGVGLEEGEIAALLKVSVETR 179
Query: 174 RVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGL 233
R E+VY+YLQKLR VRCV EET K+IE WF + NGV D+GLV+ AV +NGGGWHGL
Sbjct: 180 REERVYEYLQKLRKMVRCVREETAKVIEHWFEVFEGNGVELDVGLVREAVSRNGGGWHGL 239
Query: 234 GWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSE 293
GWIG+ KWVV+RGSV+ GKCC CG QL VDIDD ETERFA+SVA LAME+EVKANFSE
Sbjct: 240 GWIGKEKWVVRRGSVNAGGKCCCCGEQLVSVDIDDDETERFAESVAGLAMEREVKANFSE 299
Query: 294 SQ 295
Q
Sbjct: 300 FQ 301
>gi|356547141|ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Glycine max]
Length = 550
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 185/301 (61%), Positives = 217/301 (72%), Gaps = 17/301 (5%)
Query: 12 PNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNS 71
P KK+K NPET F L SC+K+KDL AISLY+ A+S N RL+ HHFNALLYLCSNS
Sbjct: 5 PKKKKKGCRNPETKFQFELNSCSKAKDLRGAISLYDDAVSNNTRLNQHHFNALLYLCSNS 64
Query: 72 ATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEF 131
DPSLK +AL +GFR F M + V+PNEA VT+VARLAA+K D+DYAFEL+K M +
Sbjct: 65 VADPSLKPTALDYGFRAFRHMSALAVLPNEATVTAVARLAAAKGDADYAFELVKSMGKNY 124
Query: 132 -NVVPRLRTYDPALFCFCENLEAQKAYEEQE-------------ITALLKVSAGTGRVEK 177
N +PRLRTYDPALFCFCE L+A KAYE +E + ALLKVSA GRV+K
Sbjct: 125 NNALPRLRTYDPALFCFCEMLDADKAYEVEEHMNGVGVSLEEAELAALLKVSARCGRVDK 184
Query: 178 VYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS---CDLGLVKNAVLKNGGGWHGLG 234
VY+YL +LRS+VRCV+E T +IE+WF G K + V D G VK VL+NGGGWHG G
Sbjct: 185 VYEYLHRLRSSVRCVSESTAVVIEEWFRGSKASEVGEAEFDAGRVKEGVLRNGGGWHGQG 244
Query: 235 WIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSES 294
W+G+G WVV R SV G CC CG QL CVDIDD ETE+FA SVAALA E+EVKANFSE
Sbjct: 245 WVGKGDWVVSRTSVVADGHCCCCGQQLVCVDIDDVETEKFAGSVAALAFEREVKANFSEF 304
Query: 295 Q 295
Q
Sbjct: 305 Q 305
>gi|356543574|ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Glycine max]
Length = 530
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 178/292 (60%), Positives = 210/292 (71%), Gaps = 17/292 (5%)
Query: 21 NPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDS 80
NPE F L +C+K+KDL AISLY+ A+S N RL+ HHFNALLYLCSNS DPSLK +
Sbjct: 15 NPEAKFQFELNTCSKAKDLRGAISLYDDAVSNNTRLNQHHFNALLYLCSNSVADPSLKPT 74
Query: 81 ALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEF-NVVPRLRT 139
AL +GFR F M + V+PNEA VT+VARLAA+K D+DYAF+L+K M + N +PRLRT
Sbjct: 75 ALDYGFRAFCHMSALAVLPNEATVTAVARLAAAKGDADYAFDLVKSMGKNYNNALPRLRT 134
Query: 140 YDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQKLR 186
YDPALFCFCE L+A KAY EE E+ ALLKVSA GR +KVY+YL KLR
Sbjct: 135 YDPALFCFCEMLDADKAYEVEEHMSGVGVSLEEAEVAALLKVSARCGRADKVYEYLHKLR 194
Query: 187 STVRCVNEETGKIIEDWFSGQK---VNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVV 243
S+VRCV+E + +IE+WF G K V V + G VK VL+NGGGWHG GW+G+G WVV
Sbjct: 195 SSVRCVSESSAVVIEEWFRGSKSSEVGEVEFEAGQVKEGVLRNGGGWHGQGWVGKGDWVV 254
Query: 244 KRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
R SV G CC CG QL CVDIDDAE E+FA SVAALA E+EVKANFSE Q
Sbjct: 255 SRTSVGADGHCCCCGEQLVCVDIDDAEREKFAGSVAALAFEREVKANFSEFQ 306
>gi|255576329|ref|XP_002529057.1| multidrug resistance pump, putative [Ricinus communis]
gi|223531469|gb|EEF33301.1| multidrug resistance pump, putative [Ricinus communis]
Length = 561
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 218/307 (71%), Gaps = 14/307 (4%)
Query: 2 SNTTSANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHF 61
+ TT+ P K K N PE+ F +L +KSKDL +AISLY++A+S +L+ HH+
Sbjct: 3 TGTTTTAPVGKKKPNKKNQTPESQFNYNLNFYSKSKDLNSAISLYKTAISNKTQLNQHHY 62
Query: 62 NALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAF 121
N LLYLCS S DPS K+ AL++GF +F+ M++ + NEA +T++ARLAA+K D DYAF
Sbjct: 63 NTLLYLCSISLNDPSEKELALQNGFDIFEHMVATGIKRNEASITAIARLAAAKGDGDYAF 122
Query: 122 ELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKV 168
LIK M + N +PRLRTYDP LFCFCE LEA KAYE E EI ALLKV
Sbjct: 123 NLIKNMLVD-NQLPRLRTYDPVLFCFCEKLEAFKAYEVEDHIVSMGMNLEELEIAALLKV 181
Query: 169 SAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGG 228
S T E+VY YLQKLR TVRCV EET KI+EDWF +VNG D+GLV+ AV+KNGG
Sbjct: 182 SVETKNKERVYGYLQKLRKTVRCVKEETAKIVEDWFKDFEVNGKELDVGLVRKAVVKNGG 241
Query: 229 GWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVK 288
GWHGLGWI +GKW VKRG++D G+CC CG LACVDIDD ETERFA S+A LAME+EVK
Sbjct: 242 GWHGLGWIEKGKWGVKRGNMDMDGRCCCCGESLACVDIDDLETERFAGSLAGLAMEREVK 301
Query: 289 ANFSESQ 295
ANFSE Q
Sbjct: 302 ANFSEFQ 308
>gi|224132016|ref|XP_002328164.1| predicted protein [Populus trichocarpa]
gi|222837679|gb|EEE76044.1| predicted protein [Populus trichocarpa]
Length = 557
Score = 352 bits (904), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 187/302 (61%), Positives = 223/302 (73%), Gaps = 15/302 (4%)
Query: 7 ANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLY 66
A+P+ KK K+N PE+ F +L +KSKDL +AISLY++A+S N RL+ H+FN LLY
Sbjct: 2 ASPAN-KKKPKSNQTPESQFSYNLNFYSKSKDLHSAISLYDTAISQNTRLNQHNFNTLLY 60
Query: 67 LCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKR 126
LCS S DPS KD +L++GFRVFD M+SN + PNEA +T+VARLAA+K D DYAF+L+K
Sbjct: 61 LCSISLNDPSTKDLSLQYGFRVFDHMVSNGIKPNEASITAVARLAAAKGDGDYAFDLVKN 120
Query: 127 MNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKVSAGTG 173
+ +N +PRLRTYDPALFC+CE LE KAYE E EI ALLKVS T
Sbjct: 121 IG-VYNELPRLRTYDPALFCYCEKLEGDKAYEVEEHMRRIGVGLEEGEIAALLKVSVETR 179
Query: 174 RVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGL 233
R E+VY YLQKLR VRCV EET K+IE WF + NGV D+GLV+ AV +NGGGWHGL
Sbjct: 180 REERVYGYLQKLRKMVRCVREETAKVIEHWFEVFEGNGVELDVGLVREAVSRNGGGWHGL 239
Query: 234 GWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSE 293
GWIG+ KWVV+RGSVD GKCC CG QL VDIDD ETERFA+SVA LAME+EVKANFSE
Sbjct: 240 GWIGKEKWVVRRGSVDAGGKCCCCGGQLVSVDIDDDETERFAESVAGLAMEREVKANFSE 299
Query: 294 SQ 295
Q
Sbjct: 300 FQ 301
>gi|224103055|ref|XP_002312906.1| predicted protein [Populus trichocarpa]
gi|222849314|gb|EEE86861.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/290 (60%), Positives = 213/290 (73%), Gaps = 14/290 (4%)
Query: 19 NPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLK 78
N PE+ F +L +KSKDL +AISLY++A+S + RL+ H FN LLYLCS S DPS +
Sbjct: 10 NQTPESQFNYNLNFYSKSKDLHSAISLYDTAISQDTRLNQHGFNTLLYLCSVSLNDPSTE 69
Query: 79 DSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLR 138
+ ALR GFR+FD M+SN + PNEA +T+VARLAA+K D DYAF+L+K + +N +PRLR
Sbjct: 70 ELALRCGFRIFDHMVSNGIKPNEASITAVARLAAAKGDGDYAFDLVKNVG-AYNELPRLR 128
Query: 139 TYDPALFCFCENLEAQKAYE-------------EQEITALLKVSAGTGRVEKVYQYLQKL 185
TYDPALFCFCE LEA KAYE E EI ALLKVS + ++VY YLQKL
Sbjct: 129 TYDPALFCFCEKLEAHKAYEVEEHMGSMGVGLEEGEIAALLKVSVESRNEKRVYGYLQKL 188
Query: 186 RSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKR 245
R VRCV ET K+IE WF+ + +GV D+ LV+ AV +NGGGWHGLGWIG+GKWV+KR
Sbjct: 189 RKMVRCVRGETAKVIEHWFAVFEGSGVELDVDLVREAVSRNGGGWHGLGWIGKGKWVLKR 248
Query: 246 GSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
GSVD GKCC CG QL VDIDD ETERFA+SVA LAM++EVKANFSE Q
Sbjct: 249 GSVDVGGKCCCCGEQLVSVDIDDDETERFAESVAGLAMQREVKANFSEFQ 298
>gi|297799862|ref|XP_002867815.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313651|gb|EFH44074.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 337 bits (863), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/315 (54%), Positives = 225/315 (71%), Gaps = 27/315 (8%)
Query: 8 NPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESAL-SLNFRLSLHHFNALLY 66
+PSKPNKK+K + NPE + LI+L SC+K KDL+ A++LY++A+ S + RL+ HF +LLY
Sbjct: 15 SPSKPNKKQKGSRNPEKSLLINLHSCSKRKDLSAALALYDAAITSSDIRLNQQHFQSLLY 74
Query: 67 LCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKR 126
LCS +DPSL+ A+ GF++FD+M+S+ + PNE+ VT+VARLAA+K D DYAF+L+K
Sbjct: 75 LCSAFISDPSLQTLAIDRGFQIFDRMVSSGISPNESSVTAVARLAAAKGDGDYAFKLVKD 134
Query: 127 MNNEFNV-VPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKVSAGT 172
+ V VPRLRTY PAL CFCE+LEA+K YE E EI+ALLKVSA T
Sbjct: 135 IVVVGGVSVPRLRTYAPALLCFCESLEAEKGYEVEEHMDASGIMLEEAEISALLKVSAAT 194
Query: 173 GRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS-----CDLGLVKNAVLKNG 227
GR KVY+YL KLR + CV+EET K IE+WF G K + +S CD+ L++ AV KNG
Sbjct: 195 GRENKVYRYLHKLRECIGCVSEETSKTIEEWFYGVKASEISDKTIGCDIELLRAAVSKNG 254
Query: 228 GGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEV 287
GGWHGLGW+G+GKW+VK+G+V +GKC SCG LACVD ++ ETE F S+ ALAME++
Sbjct: 255 GGWHGLGWVGEGKWIVKKGNVSPAGKCLSCGEHLACVDTNEVETENFVNSLVALAMERKA 314
Query: 288 K-------ANFSESQ 295
K A+FSE Q
Sbjct: 315 KMNSCEPMADFSEFQ 329
>gi|449480803|ref|XP_004156000.1| PREDICTED: proteinaceous RNase P 3-like [Cucumis sativus]
Length = 538
Score = 329 bits (844), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 165/307 (53%), Positives = 214/307 (69%), Gaps = 21/307 (6%)
Query: 1 MSNTTSANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHH 60
M +T SA K +K N +PE F + L C++ KDL +AI+L E+A+S + + H
Sbjct: 1 MDSTGSAKARKKSK----NQSPEVKFQLDLTDCSRRKDLLSAITLCETAVSEKLKFNQQH 56
Query: 61 FNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYA 120
FN LLYLCS + +DPSLK+SA+ GFRV++ + S VIPNEA VT+VARLAA+K+D D A
Sbjct: 57 FNTLLYLCSTAISDPSLKESAVSFGFRVYNLLQSIGVIPNEATVTAVARLAAAKRDGDSA 116
Query: 121 FELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLK 167
FEL+K + ++ V PRLRTYDPAL CFCENLE KAY EE +I+ALLK
Sbjct: 117 FELVKTI-GKYKVTPRLRTYDPALICFCENLEVDKAYEVEQHMNSAGVELEEPQISALLK 175
Query: 168 VSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGV---SCDLGLVKNAVL 224
+S+ TG+ +KVY+YL KLR V+CV+E T KIIE WF +K + + + D+GL++ A+L
Sbjct: 176 LSSDTGKEDKVYEYLHKLRRVVKCVSESTAKIIEGWFCSEKASDIGESTMDIGLIREAIL 235
Query: 225 KNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAME 284
NGGGWHG GWIG+G WVVKR +V SGKCC C QL VDI AETE FAQS+AALA+E
Sbjct: 236 SNGGGWHGKGWIGKGNWVVKRTNVYSSGKCCCCAQQLVGVDISCAETENFAQSLAALAIE 295
Query: 285 QEVKANF 291
+E + NF
Sbjct: 296 REAQPNF 302
>gi|449466671|ref|XP_004151049.1| PREDICTED: proteinaceous RNase P 3-like [Cucumis sativus]
Length = 538
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/307 (53%), Positives = 214/307 (69%), Gaps = 21/307 (6%)
Query: 1 MSNTTSANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHH 60
M +T SA K +K N +PE F + L C++ KDL +AI+L E+A+S + + H
Sbjct: 1 MDSTGSAKARKKSK----NQSPEVKFQLDLTDCSRRKDLLSAITLCETAVSEKLKFNQQH 56
Query: 61 FNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYA 120
FN LLYLCS + +DPSLK+SA+ GFRV++ + S VIPNEA VT+VARLAA+K+D D A
Sbjct: 57 FNTLLYLCSTAISDPSLKESAVSFGFRVYNLLQSIGVIPNEATVTAVARLAAAKRDGDSA 116
Query: 121 FELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLK 167
FEL+K + ++ V PRLRTYDPAL CFCENLE KAY EE +I+ALLK
Sbjct: 117 FELVKTI-GKYKVTPRLRTYDPALICFCENLEVDKAYEVEQHMNSAGVELEEPQISALLK 175
Query: 168 VSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGV---SCDLGLVKNAVL 224
+S+ TG+ +KVY+YL KLR V+CV+E T KIIE WF +K + + + D+GL++ A+L
Sbjct: 176 LSSDTGKEDKVYEYLHKLRRFVKCVSESTAKIIEGWFCSEKASDIGESTMDIGLIREAIL 235
Query: 225 KNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAME 284
NGGGWHG GWIG+G WVVKR +V SGKCC C QL VDI AETE FAQS+AALA+E
Sbjct: 236 SNGGGWHGKGWIGKGNWVVKRTNVYSSGKCCCCAQQLVGVDISCAETENFAQSLAALAIE 295
Query: 285 QEVKANF 291
+E + NF
Sbjct: 296 REAQPNF 302
>gi|359486225|ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Vitis vinifera]
Length = 551
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/289 (55%), Positives = 205/289 (70%), Gaps = 17/289 (5%)
Query: 23 ETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSAL 82
E F L +C+K +DL+ A++L+ESA+S NFRL +HFNALLYLC+ S +PS K AL
Sbjct: 12 EGKFRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSKALAL 71
Query: 83 RHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDP 142
+GFR+FD M+++ V PNEA +T+VARLAA+K D D AFE+++ M ++ + PRLRTY P
Sbjct: 72 DYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTM-GKYELSPRLRTYGP 130
Query: 143 ALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQKLRSTV 189
AL+ FC NLE +KA+ EE E+ ALLKVSA GR +KVY YL KLR+ V
Sbjct: 131 ALYWFCANLEGEKAWAVEEHMVSMGVHPEEPELAALLKVSAEMGRGDKVYAYLHKLRTAV 190
Query: 190 RCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRG 246
R V+E T +IIE WF G+ +V GV C LG ++ LKNGGGWHG GWIG+GKW+V R
Sbjct: 191 RSVSESTAEIIEGWFCGEAASEVGGVDCCLGAIEEVALKNGGGWHGQGWIGKGKWLVCRA 250
Query: 247 SVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
VD SG+C SC QLA VDID AETE F +SVAA+AME+EV++NF E Q
Sbjct: 251 KVDSSGQCGSCREQLATVDIDRAETETFLESVAAMAMEREVRSNFREFQ 299
>gi|147844817|emb|CAN79022.1| hypothetical protein VITISV_022893 [Vitis vinifera]
Length = 509
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/289 (55%), Positives = 205/289 (70%), Gaps = 18/289 (6%)
Query: 23 ETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSAL 82
E F L +C+K +DL+ A++L+ESA+S NFRL +HFNALLYLC+ S +PS K AL
Sbjct: 12 EGKFRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSKALAL 71
Query: 83 RHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDP 142
+GFR+FD M+++ V PNEA +T+VARLAA+K D D AFE+++ M ++ + PRLRTY P
Sbjct: 72 DYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTM-GKYELSPRLRTYGP 130
Query: 143 ALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQKLRSTV 189
AL+ FC NLE +KA+ EE E+ ALLKVSA GR +KVY YL KLR+ V
Sbjct: 131 ALYWFCANLEGEKAWAVEEHMVSMGVHPEEPELAALLKVSAEMGRGDKVYAYLHKLRTAV 190
Query: 190 RCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRG 246
R V+E T +IIE WF G+ +V GV C LG ++ LKNGGGWHG GWIG+GKW+V R
Sbjct: 191 RSVSESTAEIIEGWFCGEAASEVGGVDCCLGAIEEVALKNGGGWHGQGWIGKGKWLVCRA 250
Query: 247 SVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
VD SG+ CSC QLA VDID AETE F +SVAA+AME+EV++NF E Q
Sbjct: 251 KVDSSGR-CSCREQLATVDIDRAETETFLESVAAMAMEREVRSNFREFQ 298
>gi|186512202|ref|NP_193921.2| proteinaceous RNase P 3 [Arabidopsis thaliana]
gi|426020118|sp|F4JKB6.1|PRRP3_ARATH RecName: Full=Proteinaceous RNase P 3
gi|332659121|gb|AEE84521.1| proteinaceous RNase P 3 [Arabidopsis thaliana]
Length = 576
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 210/300 (70%), Gaps = 27/300 (9%)
Query: 23 ETNFLISLQSCTKSKDLATAISLYESAL-SLNFRLSLHHFNALLYLCSNSATDPSLKDSA 81
E + LI+L SC+K KDL+ A++LY++A+ S + RL+ HF +LLYLCS +DPSL+ A
Sbjct: 89 EKSLLINLHSCSKRKDLSAALALYDAAITSSDIRLNQQHFQSLLYLCSAFISDPSLQTVA 148
Query: 82 LRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNV-VPRLRTY 140
+ GF++FD+M+S+ + PNE+ VT+VARLAA+K D DYAF+L+K + V VPRLRTY
Sbjct: 149 IDRGFQIFDRMVSSGISPNESSVTAVARLAAAKGDGDYAFKLVKDLVAVGGVSVPRLRTY 208
Query: 141 DPALFCFCENLEAQKAYE-------------EQEITALLKVSAGTGRVEKVYQYLQKLRS 187
PAL CFC+ LEA+K YE E EI+ALLKVSA TGR KVY+YLQKLR
Sbjct: 209 APALLCFCDTLEAEKGYEVEDHMDASGIVLEEAEISALLKVSAATGRENKVYRYLQKLRE 268
Query: 188 TVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWV 242
V CV+EET K IE+WF G K NG+ D+ L++ AVLKNGGGWHGLGW+G+GKW+
Sbjct: 269 CVGCVSEETSKAIEEWFYGVKASEVSDNGIGSDIELLRAAVLKNGGGWHGLGWVGEGKWI 328
Query: 243 VKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVK-------ANFSESQ 295
VK+G+V +GKC SC LACVD ++ ETE F S+ LAME++ K A+FSE Q
Sbjct: 329 VKKGNVSSAGKCLSCDEHLACVDTNEVETEDFVNSLVTLAMERKAKMNSCEPMADFSEFQ 388
>gi|110741661|dbj|BAE98777.1| hypothetical protein [Arabidopsis thaliana]
Length = 517
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 210/300 (70%), Gaps = 27/300 (9%)
Query: 23 ETNFLISLQSCTKSKDLATAISLYESAL-SLNFRLSLHHFNALLYLCSNSATDPSLKDSA 81
E + LI+L SC+K KDL+ A++LY++A+ S + RL+ HF +LLYLCS +DPSL+ A
Sbjct: 30 EKSLLINLHSCSKRKDLSAALALYDAAITSSDIRLNQQHFQSLLYLCSAFISDPSLQTVA 89
Query: 82 LRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNV-VPRLRTY 140
+ GF++FD+M+S+ + PNE+ VT+VARLAA+K D DYAF+L+K + V VPRLRTY
Sbjct: 90 IDRGFQIFDRMVSSGISPNESSVTAVARLAAAKGDGDYAFKLVKDLVAVGGVSVPRLRTY 149
Query: 141 DPALFCFCENLEAQKAYE-------------EQEITALLKVSAGTGRVEKVYQYLQKLRS 187
PAL CFC+ LEA+K YE E EI+ALLKVSA TGR KVY+YLQKLR
Sbjct: 150 APALLCFCDTLEAEKGYEVEDHMDASGIVLEEAEISALLKVSAATGRENKVYRYLQKLRE 209
Query: 188 TVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWV 242
V CV+EET K IE+WF G K NG+ D+ L++ AVLKNGGGWHGLGW+G+GKW+
Sbjct: 210 CVGCVSEETSKAIEEWFYGVKASEVSDNGIGSDIELLRAAVLKNGGGWHGLGWVGEGKWI 269
Query: 243 VKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVK-------ANFSESQ 295
VK+G+V +GKC SC LACVD ++ ETE F S+ LAME++ K A+FSE Q
Sbjct: 270 VKKGNVSSAGKCLSCDEHLACVDTNEVETEDFVNSLVTLAMERKAKMNSCEPMADFSEFQ 329
>gi|110741376|dbj|BAF02238.1| hypothetical protein [Arabidopsis thaliana]
Length = 440
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 209/300 (69%), Gaps = 27/300 (9%)
Query: 23 ETNFLISLQSCTKSKDLATAISLYESAL-SLNFRLSLHHFNALLYLCSNSATDPSLKDSA 81
E + LI+L SC+K KDL+ A++LY++A+ S + RL+ HF +LLYLCS +DPSL+ A
Sbjct: 89 EKSLLINLHSCSKRKDLSAALALYDAAITSSDIRLNQQHFQSLLYLCSAFISDPSLQTVA 148
Query: 82 LRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNV-VPRLRTY 140
+ GF++FD+M+S+ + PNE+ VT+VARLAA+K D YAF+L+K + V VPRLRTY
Sbjct: 149 IDRGFQIFDRMVSSGISPNESSVTAVARLAAAKGDGGYAFKLVKDLVAVGGVSVPRLRTY 208
Query: 141 DPALFCFCENLEAQKAYE-------------EQEITALLKVSAGTGRVEKVYQYLQKLRS 187
PAL CFC+ LEA+K YE E EI+ALLKVSA TGR KVY+YLQKLR
Sbjct: 209 APALLCFCDTLEAEKGYEVEDHMDASGIVLEEAEISALLKVSAATGRENKVYRYLQKLRE 268
Query: 188 TVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWV 242
V CV+EET K IE+WF G K NG+ D+ L++ AVLKNGGGWHGLGW+G+GKW+
Sbjct: 269 CVGCVSEETSKAIEEWFYGVKASEVSDNGIGSDIELLRAAVLKNGGGWHGLGWVGEGKWI 328
Query: 243 VKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVK-------ANFSESQ 295
VK+G+V +GKC SC LACVD ++ ETE F S+ LAME++ K A+FSE Q
Sbjct: 329 VKKGNVSSAGKCLSCDEHLACVDTNEVETEDFVNSLVTLAMERKAKMNSCEPMADFSEFQ 388
>gi|79557286|ref|NP_179256.3| proteinaceous RNase P 2 [Arabidopsis thaliana]
gi|75116712|sp|Q680B9.1|PRRP2_ARATH RecName: Full=Proteinaceous RNase P 2
gi|51970038|dbj|BAD43711.1| unnamed protein product [Arabidopsis thaliana]
gi|330251428|gb|AEC06522.1| proteinaceous RNase P 2 [Arabidopsis thaliana]
Length = 528
Score = 303 bits (775), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 167/305 (54%), Positives = 218/305 (71%), Gaps = 20/305 (6%)
Query: 10 SKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESAL-SLNFRLSLHHFNALLYLC 68
S+PNKK+K + NPETN L +L SC+KSKDL+ A++LY++A+ S RLS HF LLYLC
Sbjct: 17 SRPNKKKKVSRNPETNLLFNLNSCSKSKDLSAALALYDAAITSSEVRLSQQHFQTLLYLC 76
Query: 69 SNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMN 128
S S TD SL+ A+ GF +FD+M+S+ + PNEA VTSVARLAA+K + DYAF+++K
Sbjct: 77 SASITDISLQYLAIDRGFEIFDRMVSSGISPNEASVTSVARLAAAKGNGDYAFKVVKEFV 136
Query: 129 NEFNV-VPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGR 174
+ V +PRLRTY PAL CFCE LEA+K Y EE EI+ALLKVSA TGR
Sbjct: 137 SVGGVSIPRLRTYAPALLCFCEKLEAEKGYEVEEHMEAAGIALEEAEISALLKVSAATGR 196
Query: 175 VEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNGGG 229
KVY+YL KLR V CV+EET KIIE+WF G+K NG+ D+G+++ AVL NGGG
Sbjct: 197 ENKVYRYLHKLREYVGCVSEETLKIIEEWFCGEKAGEVGDNGIGSDVGMLREAVLNNGGG 256
Query: 230 WHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKA 289
WHG GW+G+GKW VK+G+V +G+C SC QLACVD ++ ET++F S+ ALAM+++ K
Sbjct: 257 WHGHGWVGEGKWTVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMDRKTKM 316
Query: 290 NFSES 294
N E+
Sbjct: 317 NSCET 321
>gi|297836360|ref|XP_002886062.1| hypothetical protein ARALYDRAFT_899980 [Arabidopsis lyrata subsp.
lyrata]
gi|297331902|gb|EFH62321.1| hypothetical protein ARALYDRAFT_899980 [Arabidopsis lyrata subsp.
lyrata]
Length = 531
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/306 (54%), Positives = 216/306 (70%), Gaps = 20/306 (6%)
Query: 10 SKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESAL-SLNFRLSLHHFNALLYLC 68
S+PNKK+K + +PETN L +L SC+KSKDL+ A++LY++A+ S RLS HF L+YLC
Sbjct: 17 SRPNKKKKISRSPETNLLFNLNSCSKSKDLSAALALYDAAVTSSELRLSQQHFQTLVYLC 76
Query: 69 SNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMN 128
S S +D SL+ A+ GF +FD+M+S+ + PNEA VTSVARLAA+K D DYAF+++K
Sbjct: 77 SASISDTSLRSLAIDRGFEIFDRMVSSGISPNEASVTSVARLAAAKGDGDYAFKVVKDFV 136
Query: 129 NEFNV-VPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGR 174
+ V +PRLRTY PAL CFCE L+A Y EE EI ALLKVSA TGR
Sbjct: 137 SVGGVSIPRLRTYAPALLCFCERLDADMGYEVEEHMEAAGIALEEAEILALLKVSAATGR 196
Query: 175 VEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNGGG 229
KVY+YL KLR V CV EET KIIE+WF G+K NG+ D+G+++ AVLKNGGG
Sbjct: 197 ENKVYRYLHKLREYVGCVCEETSKIIEEWFCGEKAGEVSDNGIGSDVGMLREAVLKNGGG 256
Query: 230 WHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKA 289
WHG GW+G+GKW VK+G+V +G+C SC QLACVD ++ ET++F S+ ALAME++ K
Sbjct: 257 WHGHGWVGEGKWTVKKGNVSSTGRCLSCREQLACVDTNEVETQKFVDSLVALAMERKAKM 316
Query: 290 NFSESQ 295
N E+Q
Sbjct: 317 NSCETQ 322
>gi|147769934|emb|CAN70051.1| hypothetical protein VITISV_034435 [Vitis vinifera]
Length = 753
Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 143/251 (56%), Positives = 181/251 (72%), Gaps = 5/251 (1%)
Query: 48 SALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSV 107
SA+S NFRL +H NALLYLC+ S +PS K AL +GFR+FD ++++ V PNEA +T+V
Sbjct: 474 SAVSQNFRLIYYHCNALLYLCTISVDEPSSKALALDYGFRIFDHVVNSGVTPNEATITAV 533
Query: 108 ARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYEEQEITALLK 167
A LA +K D D AFE+++ M N + + PRLRTY PALF FC NLE +KA+ + A+ K
Sbjct: 534 ASLATAKSDGDLAFEVVRTMVN-YELSPRLRTYGPALFWFCTNLEGEKAWRSRSWPAV-K 591
Query: 168 VSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVL 224
VSA GR +KVY YL KLR+ VR V+E T +IIE WF G+ +V G C LG ++ L
Sbjct: 592 VSAEMGRGDKVYAYLHKLRTAVRSVSESTAEIIEGWFCGEATSEVGGADCCLGAIEEVAL 651
Query: 225 KNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAME 284
KNGGGWHG GWIG+GKWVV R VD SG+C SC QLA VDID AETE F++SVAA+AME
Sbjct: 652 KNGGGWHGQGWIGKGKWVVCRAKVDSSGQCGSCREQLATVDIDRAETETFSESVAAMAME 711
Query: 285 QEVKANFSESQ 295
+EV++NF E Q
Sbjct: 712 REVRSNFREFQ 722
>gi|2894568|emb|CAA17157.1| putative protein [Arabidopsis thaliana]
gi|7269035|emb|CAB79145.1| putative protein [Arabidopsis thaliana]
Length = 1094
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 144/287 (50%), Positives = 197/287 (68%), Gaps = 17/287 (5%)
Query: 23 ETNFLISLQSCTKSKDLATAISLYESAL-SLNFRLSLHHFNALLYLCSNSATDPSLKDSA 81
E + LI+L SC+K KDL+ A++LY++A+ S + RL+ HF +LLYLCS +DPSL+ A
Sbjct: 505 EKSLLINLHSCSKRKDLSAALALYDAAITSSDIRLNQQHFQSLLYLCSAFISDPSLQTVA 564
Query: 82 LRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNV-VPRLRTY 140
+ GF++FD+M+S+ + PNE+ VT+VARLAA+K D DYAF+L+K + V VPRLRTY
Sbjct: 565 IDRGFQIFDRMVSSGISPNESSVTAVARLAAAKGDGDYAFKLVKDLVAVGGVSVPRLRTY 624
Query: 141 DPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKII 200
PAL CFC+ LEA+K YE ++ + S ++ L+KLR V CV+EET K I
Sbjct: 625 APALLCFCDTLEAEKGYEVED---HMDASGIVLEEAEISALLKKLRECVGCVSEETSKAI 681
Query: 201 EDWFSGQKV-----NGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCC 255
E+WF G K NG+ D+ L++ AVLKNGGGWHGLGW+G+GKW+VK+G+V +GKC
Sbjct: 682 EEWFYGVKASEVSDNGIGSDIELLRAAVLKNGGGWHGLGWVGEGKWIVKKGNVSSAGKCL 741
Query: 256 SCGNQLACVDIDDAETERFAQSVAALAMEQEVK-------ANFSESQ 295
SC LACVD ++ ETE F S+ LAME++ K A+FSE Q
Sbjct: 742 SCDEHLACVDTNEVETEDFVNSLVTLAMERKAKMNSCEPMADFSEFQ 788
>gi|4581132|gb|AAD24622.1| hypothetical protein [Arabidopsis thaliana]
Length = 369
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 154/294 (52%), Positives = 206/294 (70%), Gaps = 11/294 (3%)
Query: 8 NPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESAL-SLNFRLSLHHFNALLY 66
+ S+PNKK+K + NPETN L +L SC+KSKDL+ A++LY++A+ S RLS HF LLY
Sbjct: 15 SSSRPNKKKKVSRNPETNLLFNLNSCSKSKDLSAALALYDAAITSSEVRLSQQHFQTLLY 74
Query: 67 LCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKR 126
LCS S TD SL+ A+ GF +FD+M+S+ + PNEA VTSVARLAA+K + DYAF+++K
Sbjct: 75 LCSASITDISLQYLAIDRGFEIFDRMVSSGISPNEASVTSVARLAAAKGNGDYAFKVVKE 134
Query: 127 MNNEFNV-VPRLRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQYLQKL 185
+ V +PRLRTY PAL CFCE LEA+K YE +E +AG E L KL
Sbjct: 135 FVSVGGVSIPRLRTYAPALLCFCEKLEAEKGYEVEEHME----AAGIALEEAEISALLKL 190
Query: 186 RSTVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNGGGWHGLGWIGQGK 240
R V CV+EET KIIE+WF G+K NG+ D+G+++ AVL NGGGWHG GW+G+GK
Sbjct: 191 REYVGCVSEETLKIIEEWFCGEKAGEVGDNGIGSDVGMLREAVLNNGGGWHGHGWVGEGK 250
Query: 241 WVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSES 294
W VK+G+V +G+C SC QLACVD ++ ET++F S+ ALAM+++ K N E+
Sbjct: 251 WTVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMDRKTKMNSCET 304
>gi|449531908|ref|XP_004172927.1| PREDICTED: proteinaceous RNase P 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 461
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 187/307 (60%), Gaps = 31/307 (10%)
Query: 14 KKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT 73
+K+ PE+ +L C+K + A+ LY+ A S +L+ HH+N LLYLCS+
Sbjct: 96 RKKALKEAPESVLKYNLDMCSKYGQVVKALELYDEARSNGIQLNQHHYNVLLYLCSS--- 152
Query: 74 DPSLKDSA---------LRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELI 124
PSL +++ L GF +F QM+++ V PNEA TS+AR+AA++ D + AF L+
Sbjct: 153 -PSLLETSGANNLSSVVLSRGFEIFQQMMTDKVSPNEATFTSLARIAAARDDPEMAFSLV 211
Query: 125 KRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKVSAG 171
K+M ++++ PRLR+Y PALF FC L ++AYE E E++ALLK+S+
Sbjct: 212 KQMK-DYHIAPRLRSYGPALFGFCRKLMPKEAYEVDSHMLASAVEPEELELSALLKLSSD 270
Query: 172 TGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGG 228
+ +KVY+ L +LR TVR V+E T K+IEDWF S +V D+ V+ +++ GG
Sbjct: 271 VKKADKVYELLHRLRRTVRQVSEPTAKVIEDWFNSESASEVGKKHWDVDKVRECIVRRGG 330
Query: 229 GWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVK 288
GWHG GW+G GKW + R +D++G C SC +L C+DID ETE FA S+ LA Q VK
Sbjct: 331 GWHGEGWLGSGKWKLVRTGIDDNGVCHSCAQKLVCIDIDPKETEDFASSLTKLA-NQRVK 389
Query: 289 ANFSESQ 295
A+F+ Q
Sbjct: 390 ADFNNFQ 396
>gi|449449619|ref|XP_004142562.1| PREDICTED: proteinaceous RNase P 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 588
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 187/307 (60%), Gaps = 31/307 (10%)
Query: 14 KKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT 73
+K+ PE+ +L C+K + A+ LY+ A S +L+ HH+N LLYLCS+
Sbjct: 96 RKKALKEAPESVLKYNLDMCSKYGQVVKALELYDEARSNGIQLNQHHYNVLLYLCSS--- 152
Query: 74 DPSLKDSA---------LRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELI 124
PSL +++ L GF +F QM+++ V PNEA TS+AR+AA++ D + AF L+
Sbjct: 153 -PSLLETSGANNLSSVVLSRGFEIFQQMMTDKVSPNEATFTSLARIAAARDDPEMAFSLV 211
Query: 125 KRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKVSAG 171
K+M ++++ PRLR+Y PALF FC L ++AYE E E++ALLK+S+
Sbjct: 212 KQMK-DYHIAPRLRSYGPALFGFCRKLMPKEAYEVDSHMLASAVEPEELELSALLKLSSD 270
Query: 172 TGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGG 228
+ +KVY+ L +LR TVR V+E T K+IEDWF S +V D+ V+ +++ GG
Sbjct: 271 VKKADKVYELLHRLRRTVRQVSEPTAKVIEDWFNSESASEVGKKHWDVDKVRECIVRRGG 330
Query: 229 GWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVK 288
GWHG GW+G GKW + R +D++G C SC +L C+DID ETE FA S+ LA Q VK
Sbjct: 331 GWHGEGWLGSGKWKLVRTGIDDNGVCHSCAQKLVCIDIDPKETEDFASSLTKLA-NQRVK 389
Query: 289 ANFSESQ 295
A+F+ Q
Sbjct: 390 ADFNNFQ 396
>gi|307135991|gb|ADN33849.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 302
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 179/304 (58%), Gaps = 31/304 (10%)
Query: 15 KRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATD 74
K+ + PE L C+K + A+ LY+ A S +L LHH+N LLYLCS+
Sbjct: 2 KKDSRDAPENVLRYKLDMCSKYGQVVKALELYDEARSDGVQLILHHYNVLLYLCSS---- 57
Query: 75 PSLKDSA---------LRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIK 125
PSL +++ L G ++ QM+++ V PNEA TS+AR+A + D + AF L+K
Sbjct: 58 PSLLETSGANNLLSVVLSRGLEIYQQMITDKVSPNEATFTSLARIAGAMDDPEMAFSLVK 117
Query: 126 RMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKVSAGT 172
+M + +++ PRLR+Y PALF FC L + AYE E E++ALLK+S+
Sbjct: 118 QMED-YHIAPRLRSYGPALFGFCRKLMPEGAYEVDSHMLASAVEPEEPELSALLKLSSDV 176
Query: 173 GRVEKVYQYLQKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGG 229
R +KVY+ L +LR TVR V+E T K+IEDWF S +V D+ V+ +++ GGG
Sbjct: 177 KRADKVYELLHRLRRTVRQVSEPTAKVIEDWFNSESASEVGKKHWDVDKVREGIVRRGGG 236
Query: 230 WHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKA 289
WHG GW+G GKW + R +D++G C SC +L C+DID ETE FA S+ LA Q VK
Sbjct: 237 WHGEGWLGSGKWRLVRTGIDDNGVCHSCAQKLVCIDIDPKETEDFASSLTKLA-NQRVKD 295
Query: 290 NFSE 293
NF +
Sbjct: 296 NFGK 299
>gi|356562261|ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Glycine max]
Length = 550
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 191/310 (61%), Gaps = 22/310 (7%)
Query: 4 TTSANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNA 63
TT+ S ++++ +PE L L C+K D+ A+ Y+ A L LSL H+N
Sbjct: 54 TTTIKLSSKSRRKAFYESPEGVLLRKLNECSKDGDVIQALRHYDEARKLGVLLSLDHYNK 113
Query: 64 LLYLCS--NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAF 121
LLYLCS ++A P L L+ GF +F QML++ V PNEA T+ ARLAA+K+D D AF
Sbjct: 114 LLYLCSVESAAGVPHL---GLKRGFEIFQQMLNDRVQPNEATFTNAARLAAAKEDPDMAF 170
Query: 122 ELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKV 168
EL+K+M N + P+LR+Y+PALF FC+ +A+KAY EE E++ALL+V
Sbjct: 171 ELLKQMKN-VAIAPKLRSYEPALFGFCKRGDAEKAYLVDADMVESGIVAEEPELSALLEV 229
Query: 169 SAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLK 225
S + +KVY+ L +LR+T+R V+E T I+E+WF+ + K+ D+ V+ + +
Sbjct: 230 SVNANKEDKVYEVLHRLRATLRQVSESTLGIVENWFNSEYAAKIGKEKWDVKKVREGIAR 289
Query: 226 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQ 285
GGGWHG GW+G G+W V V+E G C SCG +LA +DID ETE FA S++ LA ++
Sbjct: 290 GGGGWHGQGWLGSGRWKVVNTQVNEDGVCLSCGEKLASIDIDPKETENFAASLSKLACQK 349
Query: 286 EVKANFSESQ 295
E KANF Q
Sbjct: 350 EAKANFVHFQ 359
>gi|225447818|ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Vitis vinifera]
Length = 526
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/300 (42%), Positives = 187/300 (62%), Gaps = 19/300 (6%)
Query: 14 KKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT 73
+K+ +PE L C+K D+ A+ LY+ A S LS HH+N LLYLCS S +
Sbjct: 34 RKKARRESPEGVLRFKLDMCSKRGDVVEALRLYDEARSRGVPLSQHHYNVLLYLCSCSGS 93
Query: 74 --DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEF 131
D ++ + AL+ GF +F QM + + PNEA TS ARLA + +D + AF L+K+M +
Sbjct: 94 NGDENVVNLALKRGFEIFKQMGVDGIEPNEATFTSAARLACAMEDPEMAFNLVKQMKS-C 152
Query: 132 NVVPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKV 178
+ P+LR+Y P LF FC+ +A +AY EE E+ ALL +S + RV++V
Sbjct: 153 GIPPKLRSYGPPLFGFCKKGDADRAYEVDAHMMESGVVAEEPELCALLGLSVESRRVDRV 212
Query: 179 YQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGV---SCDLGLVKNAVLKNGGGWHGLGW 235
Y+ + +LR++VR V+E T +++E WF+ + GV + D+G V+ V+K GGGWHG GW
Sbjct: 213 YEMVHRLRASVRQVSESTAEVVERWFNSEDAAGVGEENWDVGKVREGVVKGGGGWHGQGW 272
Query: 236 IGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
+G+GKW V R +DE+G C SCG +L C+DID ETE FA S+ LA ++EVKA+F + Q
Sbjct: 273 LGKGKWKVVRTEMDEAGVCQSCGEKLVCIDIDPRETENFASSLTKLACQREVKADFVQFQ 332
>gi|115442469|ref|NP_001045514.1| Os01g0968000 [Oryza sativa Japonica Group]
gi|57899860|dbj|BAD87696.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113535045|dbj|BAF07428.1| Os01g0968000 [Oryza sativa Japonica Group]
Length = 548
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 172/297 (57%), Gaps = 24/297 (8%)
Query: 21 NPETNFLISLQSCTKSKDLATAISLYESALSLN--FRLSLHHFNALLYLCSNSATDPSLK 78
P ++ +L CT+ D A A++ ++SALS RL H +N L +L + + D SL
Sbjct: 21 GPNSDLSRTLTDCTRRGDAAAAMAAFDSALSGPDAPRLLAHQYNQLFHLLATADAD-SLP 79
Query: 79 DSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKD----SDYAFELIKRMNNEFNVV 134
++A RVF ML + P+EA +TS+AR+ AS +D AF+L+ M +++ V
Sbjct: 80 NAAAA-ARRVFSHMLGSGASPSEATITSLARVTASDASNPAAADEAFDLVATMRDKYGVA 138
Query: 135 PRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQY 181
PRLR+Y P L F EA KAY EE EI ALL VSA G +KVY+Y
Sbjct: 139 PRLRSYSPVLAAFRRAGEAGKAYAVDAHMEASAVAPEEPEIAALLDVSAKAGDADKVYEY 198
Query: 182 LQKLRSTVRCVNEETGKIIEDWFSGQKV---NGVSCDLGLVKNAVLKNGGGWHGLGWIGQ 238
+ KL TV CV EET +++E WF K D VK+A++ NGGG H LGW+G
Sbjct: 199 MHKLSRTVDCVGEETAEVLEGWFRSGKAAMAGKAEWDACKVKDAIVANGGGCHRLGWLGT 258
Query: 239 GKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
G W V+R V G+C CG +LACVDID ET+RFA SVA+LA+++E K NFS+ Q
Sbjct: 259 GPWTVQRVRVGGDGQCEGCGCRLACVDIDVEETQRFADSVASLALQRETKINFSQFQ 315
>gi|356527775|ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Glycine max]
Length = 724
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 175/344 (50%), Gaps = 71/344 (20%)
Query: 22 PETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCS------------ 69
PE +L C+K D+ A+SLY+SA+S +L HH+ LLYLCS
Sbjct: 105 PEVKLKNALDMCSKRGDVMGALSLYDSAISEGVKLGQHHYTVLLYLCSSAAVGVVRPAKS 164
Query: 70 -------------------------------NSATDPSLKDS-----------ALRHGFR 87
NS + + KD AL+ GF
Sbjct: 165 GSGARTLNSHVYSNEVPNEGTHFDLDGKAELNSDLNSTEKDEILLVSEDVKRYALQRGFE 224
Query: 88 VFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCF 147
V+ M + V NEA +T+VAR+A S D D AFE++++M + + PRLR+Y PALF F
Sbjct: 225 VYQNMCLDKVQMNEAALTAVARMAMSMGDGDRAFEMVRQMK-DLGISPRLRSYGPALFTF 283
Query: 148 CENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNE 194
C N E KA+ EE E+ ALL+VS G G +KVY L KLRS VR V+
Sbjct: 284 CNNGEIDKAFAVEKHMLQHGVYPEEPELEALLRVSVGAGNSDKVYYVLHKLRSIVRKVSP 343
Query: 195 ETGKIIEDWFSGQKVNGVS---CDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDES 251
T +I DWF ++ + V D L++ A+ NGGGWHG GW+G+GKW ++ +
Sbjct: 344 TTSSLIVDWFKSKQASRVGKRKWDERLIREAIENNGGGWHGQGWLGKGKWEAVHTTIGKD 403
Query: 252 GKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
G C C QL +D+D ETE FA+SVA+LA+ +E +NF + Q
Sbjct: 404 GMCKCCQVQLTTIDLDPVETENFAKSVASLAVMREKGSNFQKFQ 447
>gi|218189813|gb|EEC72240.1| hypothetical protein OsI_05356 [Oryza sativa Indica Group]
Length = 602
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 171/297 (57%), Gaps = 24/297 (8%)
Query: 21 NPETNFLISLQSCTKSKDLATAISLYESALSL--NFRLSLHHFNALLYLCSNSATDPSLK 78
P ++ +L CT+ D A A++ +++ALS RL H +N L +L + + D SL
Sbjct: 21 GPNSDLSRTLTDCTRRGDAAAAMAAFDTALSGPDAPRLLAHQYNQLFHLLATADAD-SLP 79
Query: 79 DSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKD----SDYAFELIKRMNNEFNVV 134
++A RVF ML + P+EA +TS+AR+ AS +D AF+L+ M +++ V
Sbjct: 80 NAAAA-ARRVFSHMLGSGASPSEATITSLARVTASDASNPAAADEAFDLVATMRDKYGVA 138
Query: 135 PRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQY 181
PRLR+Y P L F +A KAY EE EI AL VSA G +KVY+Y
Sbjct: 139 PRLRSYSPVLAAFRRAGDAGKAYAVDAHMEASAVAPEEPEIAALFDVSAKAGDADKVYEY 198
Query: 182 LQKLRSTVRCVNEETGKIIEDWFSGQKV---NGVSCDLGLVKNAVLKNGGGWHGLGWIGQ 238
+ KL TV CV EET +++E WF K D VK+A++ NGGG H LGW+G
Sbjct: 199 MHKLSRTVDCVGEETAEVLEGWFRSDKAAMAGKAEWDACNVKDAIVANGGGCHRLGWLGS 258
Query: 239 GKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
G W V+R V +G+C CG +LACVDID ET+RFA SVA LA+++E K NFS+ Q
Sbjct: 259 GPWTVQRVRVGGNGQCEGCGCRLACVDIDVEETQRFADSVAGLALQRETKTNFSQFQ 315
>gi|4263696|gb|AAD15382.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 187/310 (60%), Gaps = 20/310 (6%)
Query: 4 TTSANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNA 63
+ S N S+ KK+ +PE L C+K D+ A+ LY+ A +LS +H+N
Sbjct: 48 SPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNV 107
Query: 64 LLYLCS--NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAF 121
LLY+CS +AT+ S + L GF +F QM+ + V+PNEA T+ ARLA +K D + AF
Sbjct: 108 LLYVCSLAEAATESS-PNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAF 166
Query: 122 ELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKV 168
+++K+M F + PRLR+Y PALF FC +A KAYE E E+ ALLKV
Sbjct: 167 DMVKQMK-AFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKV 225
Query: 169 SAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLK 225
S T +KVY+ LQ+LR VR V++ T +IE+WF + K D+ +++AV+
Sbjct: 226 SMDTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFKSEVATKTGVKKWDVKKIRDAVVS 285
Query: 226 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQ 285
GGGWHG GW+G GKW VKR +DE+G C C +L C+DI+ ETE FA S+ LA E+
Sbjct: 286 GGGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACER 345
Query: 286 EVKANFSESQ 295
EVKANF++ Q
Sbjct: 346 EVKANFNQFQ 355
>gi|406855803|pdb|4G24|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
A. Thaliana With Mn
gi|406855805|pdb|4G26|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
A. Thaliana With Ca
Length = 501
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 187/310 (60%), Gaps = 20/310 (6%)
Query: 4 TTSANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNA 63
+ S N S+ KK+ +PE L C+K D+ A+ LY+ A +LS +H+N
Sbjct: 7 SPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNV 66
Query: 64 LLYLCS--NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAF 121
LLY+CS +AT+ S + L GF +F QM+ + V+PNEA T+ ARLA +K D + AF
Sbjct: 67 LLYVCSLAEAATESS-PNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAF 125
Query: 122 ELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKV 168
+++K+M F + PRLR+Y PALF FC +A KAYE E E+ ALLKV
Sbjct: 126 DMVKQMK-AFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKV 184
Query: 169 SAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLK 225
S T +KVY+ LQ+LR VR V++ T +IE+WF + K D+ +++AV+
Sbjct: 185 SMDTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFKSEVATKTGVKKWDVKKIRDAVVS 244
Query: 226 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQ 285
GGGWHG GW+G GKW VKR +DE+G C C +L C+DI+ ETE FA S+ LA E+
Sbjct: 245 GGGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACER 304
Query: 286 EVKANFSESQ 295
EVKANF++ Q
Sbjct: 305 EVKANFNQFQ 314
>gi|20259520|gb|AAM13880.1| unknown protein [Arabidopsis thaliana]
Length = 572
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 187/310 (60%), Gaps = 20/310 (6%)
Query: 4 TTSANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNA 63
+ S N S+ KK+ +PE L C+K D+ A+ LY+ A +LS +H+N
Sbjct: 78 SPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNV 137
Query: 64 LLYLCS--NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAF 121
LLY+CS +AT+ S + L GF +F QM+ + V+PNEA T+ ARLA +K D + AF
Sbjct: 138 LLYVCSLAEAATESS-PNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAF 196
Query: 122 ELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKV 168
+++K+M F + PRLR+Y PALF FC +A KAYE E E+ ALLKV
Sbjct: 197 DMVKQMK-AFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELVALLKV 255
Query: 169 SAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLK 225
S T +KVY+ LQ+LR VR V++ T +IE+WF + K D+ +++AV+
Sbjct: 256 SMDTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFKSEVATKTGVKKWDVKKIRDAVVS 315
Query: 226 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQ 285
GGGWHG GW+G GKW VKR +DE+G C C +L C+DI+ ETE FA S+ LA E+
Sbjct: 316 GGGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACER 375
Query: 286 EVKANFSESQ 295
EVKANF++ Q
Sbjct: 376 EVKANFNQFQ 385
>gi|30685224|ref|NP_850186.1| proteinaceous RNase P 1 [Arabidopsis thaliana]
gi|75115346|sp|Q66GI4.1|PRRP1_ARATH RecName: Full=Proteinaceous RNase P 1, chloroplastic/mitochondrial;
AltName: Full=Pentatricopeptide repeat-containing
protein At2g32230; Flags: Precursor
gi|51536606|gb|AAU05541.1| At2g32230 [Arabidopsis thaliana]
gi|330253558|gb|AEC08652.1| proteinaceous RNase P 1 [Arabidopsis thaliana]
Length = 572
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 187/310 (60%), Gaps = 20/310 (6%)
Query: 4 TTSANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNA 63
+ S N S+ KK+ +PE L C+K D+ A+ LY+ A +LS +H+N
Sbjct: 78 SPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNV 137
Query: 64 LLYLCS--NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAF 121
LLY+CS +AT+ S + L GF +F QM+ + V+PNEA T+ ARLA +K D + AF
Sbjct: 138 LLYVCSLAEAATESS-PNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAF 196
Query: 122 ELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKV 168
+++K+M F + PRLR+Y PALF FC +A KAYE E E+ ALLKV
Sbjct: 197 DMVKQMK-AFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKV 255
Query: 169 SAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLK 225
S T +KVY+ LQ+LR VR V++ T +IE+WF + K D+ +++AV+
Sbjct: 256 SMDTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFKSEVATKTGVKKWDVKKIRDAVVS 315
Query: 226 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQ 285
GGGWHG GW+G GKW VKR +DE+G C C +L C+DI+ ETE FA S+ LA E+
Sbjct: 316 GGGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACER 375
Query: 286 EVKANFSESQ 295
EVKANF++ Q
Sbjct: 376 EVKANFNQFQ 385
>gi|356553964|ref|XP_003545320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Glycine max]
Length = 559
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/310 (42%), Positives = 187/310 (60%), Gaps = 22/310 (7%)
Query: 4 TTSANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNA 63
TT S +++ +PE L L C+K ++A A+ Y+ A L L+L H+N
Sbjct: 53 TTIVKLSSKARRKAFYESPEGVLLRKLNECSKDGNVAQALCHYDEARKLGVLLNLDHYNK 112
Query: 64 LLYLCS--NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAF 121
LLYLCS ++A P+L L+ GF VF QML++ V PNEA T+ ARLAA+ +D D AF
Sbjct: 113 LLYLCSIESAAGFPNL---GLKRGFEVFQQMLNDRVQPNEATFTNAARLAAANEDPDMAF 169
Query: 122 ELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKV 168
EL+K+M N + P+LR+Y+PALF FC+ +A+KAY EE E++ALL+V
Sbjct: 170 ELLKQMKN-VAIAPKLRSYEPALFGFCKRGDAEKAYLVDADMVESGIVAEEPELSALLEV 228
Query: 169 SAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLK 225
S + +KVY L +LRST+R V+E T I+EDWF+ + K+ D+ V+ + +
Sbjct: 229 SVNAKKEDKVYDILHRLRSTLRQVSESTLGIVEDWFNSEYAAKIGKEKWDVKKVREGIAQ 288
Query: 226 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQ 285
GGGWHG GW+G G+W V V+E G C CG +L +DID ETE FA S++ LA ++
Sbjct: 289 GGGGWHGQGWLGSGRWKVANTQVNEDGVCPLCGEKLVSIDIDPKETENFAASLSKLACQK 348
Query: 286 EVKANFSESQ 295
E KANF Q
Sbjct: 349 EAKANFVHFQ 358
>gi|225462213|ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Vitis vinifera]
Length = 895
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 193/315 (61%), Gaps = 21/315 (6%)
Query: 1 MSNTTSANPSKPNKKRKT--NPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSL 58
+ +++A + NK RK +PE L C+K D+ A+ LY+ A SL LS
Sbjct: 388 IPESSAAAKTMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRLYDEARSLGVPLSQ 447
Query: 59 HHFNALLYLCSNSAT--DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKD 116
H++N LLYLCS S + D ++ + AL+ GF +F QM + + PNEA TS ARLA + +D
Sbjct: 448 HNYNVLLYLCSCSGSNGDENVVNLALKRGFEIFKQMGVDGIEPNEATFTSAARLACAMED 507
Query: 117 SDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQEIT 163
+ AF L+K+M + + P+LR+Y P LF FC+ +A +AY EE E+
Sbjct: 508 PEMAFNLVKQMKS-CGIPPKLRSYGPPLFGFCKKGDANRAYEVDAHMVESGVVAEEPELC 566
Query: 164 ALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGV---SCDLGLVK 220
ALL +S + V++VY+ + +LR++VR V+E T +++E WF+ + GV + D+G V+
Sbjct: 567 ALLGLSVESRWVDQVYEMMHRLRASVRQVSESTAEVVERWFNSEDAAGVGEENWDVGKVR 626
Query: 221 NAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAA 280
V+K GGGWHG GW+G+GKW V R +DE+G C SCG +L +DID ETE FA S+
Sbjct: 627 EGVVKGGGGWHGQGWLGKGKWKVGRTEMDEAGVCQSCGEKLVGIDIDPRETENFASSLTK 686
Query: 281 LAMEQEVKANFSESQ 295
LA ++EVKA+F + Q
Sbjct: 687 LACQREVKADFVQFQ 701
>gi|357454841|ref|XP_003597701.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486749|gb|AES67952.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 558
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 174/282 (61%), Gaps = 17/282 (6%)
Query: 30 LQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVF 89
L +C+K+ D+ A++LY+ A + L+L H+N LLYLC+ D S L+ GF +F
Sbjct: 89 LNNCSKTSDVLQALNLYDEARKAHVPLNLDHYNKLLYLCTVQNGDGSFFHLGLQRGFEIF 148
Query: 90 DQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCE 149
+QML +NV PNEA T+ ARLAA+K+D + AFEL+K+M + P+LR+Y PAL+ FC
Sbjct: 149 EQMLRDNVEPNEATFTNAARLAAAKEDPEMAFELLKQM-KRVGIAPKLRSYGPALYGFCA 207
Query: 150 NLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEET 196
+A KAY EE E+ ALL+VS +KVY+ L +LR+ VR V+E T
Sbjct: 208 RGDAMKAYEVDDDMIESGVMAEEDELCALLEVSVEVKNEDKVYEILHRLRAVVRQVSEST 267
Query: 197 GKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGK 253
K+IEDWF + K+ D ++ ++ GGGWHG GW+G G+W V + +VDE G
Sbjct: 268 LKVIEDWFESEYAMKIGKREWDDEEIREGFVRGGGGWHGQGWLGSGEWKVVKTNVDEDGM 327
Query: 254 CCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
C SC +L +DID ETE FA S++ LA E++ KANF+ Q
Sbjct: 328 CLSCSEKLVSIDIDPKETENFAASLSKLAHEKQPKANFNHFQ 369
>gi|297826669|ref|XP_002881217.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327056|gb|EFH57476.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 572
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 185/310 (59%), Gaps = 20/310 (6%)
Query: 4 TTSANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNA 63
+ S N S+ KK+ +PE L C+K D+ A+ LY+ A +LS +H+N
Sbjct: 78 SPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNV 137
Query: 64 LLYLCS--NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAF 121
LLY+CS +AT+ S + L GF +F QM+ + V+PNEA T+ ARLA +K D + AF
Sbjct: 138 LLYVCSLAEAATESS-PNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAF 196
Query: 122 ELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKV 168
+++K+M F + PRLR+Y PALF FC +A KAYE E E+ ALLKV
Sbjct: 197 DMVKQMK-AFGIQPRLRSYGPALFGFCRKGDAGKAYEVDAHMVESEVVPEEPELAALLKV 255
Query: 169 SAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLK 225
S T +KVY+ LQ+LR VR V++ T IE+WF + K D+ +++AV
Sbjct: 256 SMDTKNADKVYEMLQRLRDLVRQVSKSTFDTIEEWFKSEAAAKAGVKKWDVKKIRDAVES 315
Query: 226 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQ 285
GGGWHG GW+G GKW VKR +DE+G C C +L C+DI+ ETE FA S+ LA E+
Sbjct: 316 GGGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACER 375
Query: 286 EVKANFSESQ 295
EVKANF++ Q
Sbjct: 376 EVKANFNQFQ 385
>gi|224134767|ref|XP_002327484.1| predicted protein [Populus trichocarpa]
gi|222836038|gb|EEE74459.1| predicted protein [Populus trichocarpa]
Length = 486
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 177/299 (59%), Gaps = 21/299 (7%)
Query: 14 KKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT 73
KK+ PE L +C+K D+ + LY+ A L+ HH+N LLYLCS +
Sbjct: 6 KKKARREAPEGVLKFKLDTCSKRGDVVEGLRLYDEARKNGVELNQHHYNVLLYLCSQNGG 65
Query: 74 DPSLKDSALR-HGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFN 132
+ S LR GF +F QM+ + V PNEA T+ ARLA++ +D + AF+L+K+M F
Sbjct: 66 E---NVSDLRKQGFEIFQQMIIDKVPPNEATFTNAARLASAMEDPEMAFDLVKQMKG-FG 121
Query: 133 VVPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVY 179
++P+LR+Y P LF FC+ A KAY EE E++ALLKVSA +KVY
Sbjct: 122 ILPKLRSYGPPLFGFCKKGMADKAYEVDAHMIEYGVVAEEPELSALLKVSADVNNADKVY 181
Query: 180 QYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHGLGWI 236
+ L +LR++VR E T IIEDWF + K + D+ VK V + GGGWHG GW+
Sbjct: 182 ELLHRLRTSVRQATESTVGIIEDWFKSKHAAKTGKENWDVRKVKEGVARGGGGWHGQGWL 241
Query: 237 GQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
G G+W V R +D+ G C SCG +LAC+DID ETE FA S++ LA+ +EVKA+F Q
Sbjct: 242 GCGQWRVVRTQMDKEGVCGSCGERLACIDIDPRETEDFAISLSKLALGREVKADFIRFQ 300
>gi|224077472|ref|XP_002305261.1| predicted protein [Populus trichocarpa]
gi|222848225|gb|EEE85772.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 178/303 (58%), Gaps = 18/303 (5%)
Query: 10 SKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCS 69
SK KK+ PE L C+K D+ + LY+ A L+ HH+N +LYLCS
Sbjct: 29 SKRLKKKARRDAPEGVLRFKLDMCSKVGDVVEGLRLYDEARRNGVELNQHHYNVMLYLCS 88
Query: 70 -NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMN 128
N + S A + GF +F QM+ + V PNEA T+ ARLA+ +D + AF+L+K+M
Sbjct: 89 QNRGENGSDLKLACKRGFEIFQQMIIDKVPPNEATFTNAARLASVMEDPEMAFDLVKQMK 148
Query: 129 NEFNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRV 175
F ++P+LR+Y P LF FC+ KAY EE E+++LLK+SA
Sbjct: 149 G-FGIMPKLRSYGPPLFGFCKKGMVDKAYEVDAHMIESGVVAEEPELSSLLKLSADVNNA 207
Query: 176 EKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHG 232
+K+Y+ L +LR++VR V E T +IEDWF + K+ D+ VK V++ GGGWHG
Sbjct: 208 DKMYELLHRLRTSVRQVMESTVGVIEDWFKSEHAAKIGKGDWDVIKVKEGVVRGGGGWHG 267
Query: 233 LGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFS 292
GW+G G+W V R +D+ G C SCG +LAC+DID ETE FA S++ LA +EVKA+F
Sbjct: 268 QGWLGHGQWRVVRTQMDKKGVCGSCGERLACIDIDPRETENFAISLSKLAFGREVKADFI 327
Query: 293 ESQ 295
+ Q
Sbjct: 328 QFQ 330
>gi|194698092|gb|ACF83130.1| unknown [Zea mays]
Length = 521
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 152/263 (57%), Gaps = 27/263 (10%)
Query: 55 RLSLHHFNALLYLCSNSATD----PSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARL 110
RLS H +N LL+L + ATD PS +A R RVF ML P+EA +TS+AR+
Sbjct: 31 RLSAHQYNQLLHLLA--ATDRSSFPSPPAAAAR---RVFAHMLQAAAPPSEATITSLARV 85
Query: 111 AASKKDS--DYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY----------- 157
A+ S D AFEL+ M +++ + PRLR+Y P L F EA KAY
Sbjct: 86 IAADPASAADEAFELVATMKDKYGLSPRLRSYGPVLAAFRRAGEAAKAYAVEAHMTASGV 145
Query: 158 --EEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS-- 213
EE E+ ALL VS+ G +KVY+Y+ KLR V CV+EET ++E WF +
Sbjct: 146 SPEEPELAALLDVSSRAGDADKVYEYMHKLRQAVHCVSEETAGVVEAWFRSDEAATAGKP 205
Query: 214 -CDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETE 272
D VK+A++ NGGG H LGW+G G W V+R V ++ +C C LAC+DID ET+
Sbjct: 206 QWDAAQVKDAIVANGGGCHRLGWLGTGPWTVQRVRVGDADQCGGCRFHLACIDIDMEETQ 265
Query: 273 RFAQSVAALAMEQEVKANFSESQ 295
RFA SVA LA+E+E K NFS Q
Sbjct: 266 RFADSVAGLALERETKTNFSRFQ 288
>gi|226491748|ref|NP_001150343.1| antiporter/ drug transporter/ transporter [Zea mays]
gi|195638562|gb|ACG38749.1| antiporter/ drug transporter/ transporter [Zea mays]
Length = 545
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 152/263 (57%), Gaps = 27/263 (10%)
Query: 55 RLSLHHFNALLYLCSNSATD----PSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARL 110
RLS H +N LL+L + ATD PS +A R RVF ML P+EA +TS+AR+
Sbjct: 55 RLSAHQYNQLLHLLA--ATDRSSFPSPPAAAAR---RVFAHMLQAAAPPSEATITSLARV 109
Query: 111 AASKKDS--DYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY----------- 157
A+ S D AFEL+ M +++ + PRLR+Y P L F EA KAY
Sbjct: 110 IAADPASAADEAFELVATMKDKYGLSPRLRSYGPVLAAFRRAGEAAKAYAVEAHMTASGV 169
Query: 158 --EEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS-- 213
EE E+ ALL VS+ G +KVY+Y+ KLR V CV+EET ++E WF +
Sbjct: 170 SPEEPELAALLDVSSRAGDADKVYEYMHKLRQAVHCVSEETAGVVEAWFRSDEAATAGKP 229
Query: 214 -CDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETE 272
D VK+A++ NGGG H LGW+G G W V+R V ++ +C C LAC+DID ET+
Sbjct: 230 QWDAAQVKDAIVANGGGCHRLGWLGTGPWTVQRVRVGDADQCGGCRFHLACIDIDMEETQ 289
Query: 273 RFAQSVAALAMEQEVKANFSESQ 295
RFA SVA LA+E+E K NFS Q
Sbjct: 290 RFADSVAGLALERETKTNFSRFQ 312
>gi|326518132|dbj|BAK07318.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 692
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 175/289 (60%), Gaps = 24/289 (8%)
Query: 21 NPETNFLISLQSCTKSKDLATAISLYESAL--SLNFRLSLHHFNALLYLCSNSATDPSLK 78
+PE L C++ DLATA+ LYE+A+ + L+LHH+N LLYLCSNS
Sbjct: 86 SPEGLLKHRLDMCSRDADLATALQLYEAAVDPATAVPLALHHYNCLLYLCSNSG-----D 140
Query: 79 DSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLR 138
A R GF +F M + V PNEA +TS+ARLAA+ +D AF +++RM + PRLR
Sbjct: 141 ADAARRGFEIFAAMEAQGVEPNEATLTSLARLAAAVRDPAMAFSVVRRMAAA-GIPPRLR 199
Query: 139 TYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQKL 185
+Y PALF +C+ +A A EE E+TALL+V+A GR ++VY+ L +
Sbjct: 200 SYGPALFAYCDARDANGAAEVEAHMDAGGVVPEETELTALLRVNADIGRADQVYRVLHRT 259
Query: 186 RSTVRCVNEETGKIIEDWFSGQKV--NGVS-CDLGLVKNAVLKNGGGWHGLGWIGQGKWV 242
R+ VR V + T +++E WF GV D V+ V+K GGGWHG GW+G+G+W
Sbjct: 260 RTLVRQVCQATAQVVEAWFRSDAAAEAGVDKWDARKVREGVVKGGGGWHGQGWLGKGQWD 319
Query: 243 VKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANF 291
V + +D+ G+C CG +L C+DID +ETE FA+S+A LA +EV+ +F
Sbjct: 320 VGQSEMDKDGRCQRCGEKLVCIDIDPSETETFAKSLAELACNREVRDDF 368
>gi|357166890|ref|XP_003580902.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Brachypodium distachyon]
Length = 567
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 129/291 (44%), Positives = 182/291 (62%), Gaps = 22/291 (7%)
Query: 21 NPETNFLISLQSCTKSKDLATAISLYESAL----SLNFRLSLHHFNALLYLCSNSATDPS 76
+PE L C++ DL TA++LY++AL S LS+HH+N LLYLCSN+A S
Sbjct: 87 SPEGLLKHKLDMCSRDGDLPTALALYDAALDPASSPPVPLSIHHYNCLLYLCSNAAATAS 146
Query: 77 LKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPR 136
D+A R GF +F +M + V PNEA +TSVARLAA+++D AF +++RM + + PR
Sbjct: 147 DPDAASR-GFEIFARMEAQGVEPNEATLTSVARLAAARRDPAMAFSVVRRMADA-GIPPR 204
Query: 137 LRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQ 183
LRTY PALF +C+ +A A EE E+ ALL+V+A GR ++VY+ L
Sbjct: 205 LRTYGPALFAYCDAGDADGASEVEAHMDAGGVLPEETELAALLRVNADKGRADEVYRVLH 264
Query: 184 KLRSTVRCVNEETGKIIEDWFSGQKVN--GVS-CDLGLVKNAVLKNGGGWHGLGWIGQGK 240
+ R R V E T ++IE WF + GV D VK V+K GGGWHG GW+G+G+
Sbjct: 265 RTRVLARQVCETTAQVIEAWFRSDAASQAGVDKWDAKKVKEGVVKGGGGWHGQGWLGKGQ 324
Query: 241 WVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANF 291
W V+R +D++GKC CG +L C+DID +ETE FA+S+ LA ++EV+ +F
Sbjct: 325 WDVERSEMDKNGKCQRCGEKLVCIDIDPSETENFAKSLTELACKREVRDDF 375
>gi|302764204|ref|XP_002965523.1| hypothetical protein SELMODRAFT_84628 [Selaginella moellendorffii]
gi|300166337|gb|EFJ32943.1| hypothetical protein SELMODRAFT_84628 [Selaginella moellendorffii]
Length = 532
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 173/300 (57%), Gaps = 24/300 (8%)
Query: 14 KKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT 73
KK+K P+ E F L+SC+K D+ A+ +Y+S+ +LS +H+N LLYLCS++A
Sbjct: 42 KKKKFTPDSELRF--KLESCSKVGDVTGALDIYDSSKDQGVKLSQYHYNVLLYLCSSAAL 99
Query: 74 DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNV 133
L AL G ++++M + NEA TS+ARLA +K+D D AF L+K M +
Sbjct: 100 GVIL---ALDRGLEIYERMKLEGISANEAAFTSIARLAVAKRDGDLAFSLVKEMTTS-GI 155
Query: 134 VPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKVSAGTGRVEKVYQ 180
P+LR+Y PAL+ + ++ KA+E E E+ LL++S G+ ++VY
Sbjct: 156 TPKLRSYGPALYTYFKSNRVDKAFEVDDHMRSFGVQPEEMELQILLELSLKAGQEQRVYS 215
Query: 181 YLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC----DLGLVKNAVLKNGGGWHGLGWI 236
L +LR +VR V+ T IE WFS + D V+ A+ GGG LGWI
Sbjct: 216 VLHRLRRSVREVSPSTATTIERWFSSDAASSSGSDKKYDDEDVRRALAAQGGGGLELGWI 275
Query: 237 GQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKAN-FSESQ 295
G G+W VKR ++D SG C SC +++A VD++ ET RFA+++AALA E+E AN F E Q
Sbjct: 276 GSGRWSVKRTALDASGVCESCRHKMAAVDLNAEETNRFAENLAALACEKERDANSFKEFQ 335
>gi|406855802|pdb|4G23|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
A. Thaliana With Mn
gi|406855804|pdb|4G25|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
A. Thaliana, Semet Substituted Form With Sr
Length = 501
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 182/310 (58%), Gaps = 20/310 (6%)
Query: 4 TTSANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNA 63
+ S N S+ KK+ +PE L C+K D+ A+ LY+ A +LS +H+N
Sbjct: 7 SPSENLSRKAKKKAIQQSPEALLKQKLDXCSKKGDVLEALRLYDEARRNGVQLSQYHYNV 66
Query: 64 LLYLCS--NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAF 121
LLY+CS +AT+ S + L GF +F Q + + V+PNEA T+ ARLA +K D + AF
Sbjct: 67 LLYVCSLAEAATESS-PNPGLSRGFDIFKQXIVDKVVPNEATFTNGARLAVAKDDPEXAF 125
Query: 122 ELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKV 168
+ +K+ F + PRLR+Y PALF FC +A KAYE E E+ ALLKV
Sbjct: 126 DXVKQXK-AFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHXVESEVVPEEPELAALLKV 184
Query: 169 SAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLK 225
S T +KVY+ LQ+LR VR V++ T IE+WF + K D+ +++AV+
Sbjct: 185 SXDTKNADKVYKTLQRLRDLVRQVSKSTFDXIEEWFKSEVATKTGVKKWDVKKIRDAVVS 244
Query: 226 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQ 285
GGGWHG GW+G GKW VKR DE+G C C +L C+DI+ ETE FA S+ LA E+
Sbjct: 245 GGGGWHGQGWLGTGKWNVKRTEXDENGVCKCCKEKLVCIDINPVETETFAASLTRLACER 304
Query: 286 EVKANFSESQ 295
EVKANF++ Q
Sbjct: 305 EVKANFNQFQ 314
>gi|302802496|ref|XP_002983002.1| hypothetical protein SELMODRAFT_117602 [Selaginella moellendorffii]
gi|300149155|gb|EFJ15811.1| hypothetical protein SELMODRAFT_117602 [Selaginella moellendorffii]
Length = 534
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 172/300 (57%), Gaps = 24/300 (8%)
Query: 14 KKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT 73
KK+K P+ E F L+SC+K D+ A+ +Y+S+ +LS +H+N LLYLCS++A
Sbjct: 42 KKKKFTPDSELRF--KLESCSKVGDVTGALDIYDSSKDQGVKLSQYHYNVLLYLCSSAAL 99
Query: 74 DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNV 133
L AL G ++++M + NEA TS+ARLA +K+D D AF L+K M +
Sbjct: 100 GVIL---ALDRGLEIYERMKLEGISANEAAFTSIARLAVAKRDGDLAFSLVKEMTTS-GI 155
Query: 134 VPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKVSAGTGRVEKVYQ 180
P+LR+Y PAL+ + ++ + KA+E E E+ LL++S G ++VY
Sbjct: 156 TPKLRSYGPALYTYFKSNQVDKAFEVDDHMRSFGVQPEEMELQILLELSLKAGLDQRVYS 215
Query: 181 YLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC----DLGLVKNAVLKNGGGWHGLGWI 236
L +LR +VR V+ T IE WFS + D V+ A+ GGG LGWI
Sbjct: 216 VLHRLRRSVREVSPSTATTIERWFSSDAASSSGSDKKYDDEDVRRALAAQGGGGLELGWI 275
Query: 237 GQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKAN-FSESQ 295
G G W VKR ++D SG C SC +++A VD++ ET RFA+++AALA E+E AN F E Q
Sbjct: 276 GSGGWSVKRTALDASGVCESCRHKMAAVDLNAEETNRFAENLAALACEKERDANSFKEFQ 335
>gi|242046020|ref|XP_002460881.1| hypothetical protein SORBIDRAFT_02g036790 [Sorghum bicolor]
gi|241924258|gb|EER97402.1| hypothetical protein SORBIDRAFT_02g036790 [Sorghum bicolor]
Length = 526
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 150/262 (57%), Gaps = 21/262 (8%)
Query: 55 RLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASK 114
RL+ H +N LL+L +++ +A RVF ML P+EA +TS+AR+ A+
Sbjct: 31 RLAAHQYNQLLHLLASADRSSFPGPAAAAAARRVFAHMLQAGAPPSEATITSLARVIAAA 90
Query: 115 KD-----SDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY------------ 157
D +D AFEL+ M +++ + PRLR+Y P L F EA KAY
Sbjct: 91 DDPGSSAADEAFELVATMKDKYGLSPRLRSYGPVLAAFRSAGEAAKAYAVEAHMTASGVS 150
Query: 158 -EEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQK--VNGVS- 213
EE E+ ALL VS+ G +KVY+Y+ KLR V CV+EET ++E WF K + G S
Sbjct: 151 PEEPELAALLDVSSRAGDADKVYEYMHKLRQAVDCVSEETAGVVEAWFRSDKAAMAGKSE 210
Query: 214 CDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETER 273
+ VK+A++ NGGG H LGW+G G W ++R V +C C +LAC+DID ET +
Sbjct: 211 WNAAQVKDAIVANGGGCHRLGWLGTGPWTMQRVRVGADDQCAGCRYRLACIDIDMEETRK 270
Query: 274 FAQSVAALAMEQEVKANFSESQ 295
FA SVA LA+E+E K NFS Q
Sbjct: 271 FADSVAGLALERETKTNFSRFQ 292
>gi|357520987|ref|XP_003630782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524804|gb|AET05258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 143/235 (60%), Gaps = 17/235 (7%)
Query: 77 LKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPR 136
+K+ AL+ GF V++ M + V NEA +TSVAR+A + D D AFE++K+M + PR
Sbjct: 191 VKEYALQRGFEVYENMRMSKVEMNEAALTSVARMAMALSDGDKAFEMVKQMK-ILGINPR 249
Query: 137 LRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQ 183
LR+Y PAL +C N E KA+ EE E+ ALL+VS G+ ++VY L
Sbjct: 250 LRSYGPALSTYCNNGEIDKAFDVEKHMLEHGVYPEEPELEALLRVSIRGGKSDRVYYVLH 309
Query: 184 KLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGK 240
KLRS+VR V+ T +I DWF + KV D GL+ A+ NGGGWHG GW+G+GK
Sbjct: 310 KLRSSVRKVSTTTADLIVDWFKSKIALKVGKRKWDNGLIMKAMQNNGGGWHGTGWLGKGK 369
Query: 241 WVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
W V + SV + G C CG QLA +D+D ETE FA+SVA++A+ E +NF Q
Sbjct: 370 WQVLQTSVRKDGMCKCCGVQLATIDLDPVETENFAKSVASIAISNEKNSNFQTFQ 424
>gi|357520951|ref|XP_003630764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524786|gb|AET05240.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 143/235 (60%), Gaps = 17/235 (7%)
Query: 77 LKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPR 136
+K+ AL+ GF V++ M + V NEA +TSVAR+A + D D AFE++K+M + PR
Sbjct: 225 VKEYALQRGFEVYENMRMSKVEMNEAALTSVARMAMALSDGDKAFEMVKQMK-ILGINPR 283
Query: 137 LRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQ 183
LR+Y PAL +C N E KA+ EE E+ ALL+VS G+ ++VY L
Sbjct: 284 LRSYGPALSTYCNNGEIDKAFDVEKHMLEHGVYPEEPELEALLRVSIRGGKSDRVYYVLH 343
Query: 184 KLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGK 240
KLRS+VR V+ T +I DWF + KV D GL+ A+ NGGGWHG GW+G+GK
Sbjct: 344 KLRSSVRKVSTTTADLIVDWFKSKIALKVGKRKWDNGLIMKAMQNNGGGWHGTGWLGKGK 403
Query: 241 WVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
W V + SV + G C CG QLA +D+D ETE FA+SVA++A+ E +NF Q
Sbjct: 404 WQVLQTSVRKDGMCKCCGVQLATIDLDPVETENFAKSVASIAISNEKNSNFQTFQ 458
>gi|226497374|ref|NP_001147555.1| antiporter/ drug transporter/ transporter [Zea mays]
gi|195612160|gb|ACG27910.1| antiporter/ drug transporter/ transporter [Zea mays]
gi|219884449|gb|ACL52599.1| unknown [Zea mays]
Length = 553
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 180/299 (60%), Gaps = 22/299 (7%)
Query: 14 KKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLN--FRLSLHHFNALLYLCSNS 71
++R+ +P+ L C+++ DL TA+ LY+ ALS + LSLHH+N LLYLCSN+
Sbjct: 66 RRRRARESPQGLLRHQLDMCSRNADLTTALRLYDDALSPDNPIPLSLHHYNCLLYLCSNA 125
Query: 72 A---TDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMN 128
A +D + +A + GF +F +M ++ V PNEA +TSVARLAA+ +D AF +++RM
Sbjct: 126 AATDSDSHISATAAQRGFDIFARMEADGVQPNEATLTSVARLAAATRDPAMAFSVVRRMA 185
Query: 129 NEFNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRV 175
PRLRTY PALF +C+ +A A EE E+ ALL+V+A TG+
Sbjct: 186 AA-GTPPRLRTYGPALFAYCDAKDADGAKQVEAHMDASGVVPEEPELAALLRVNADTGKA 244
Query: 176 EKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVN--GV-SCDLGLVKNAVLKNGGGWHG 232
++VY+ L + R VR V + T +++E WF + GV S D VK V+K GGGWHG
Sbjct: 245 DEVYRLLHRTRVLVRQVCDTTAQVVEAWFRSDAASQAGVDSWDPTKVKEGVVKGGGGWHG 304
Query: 233 LGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANF 291
GW+G+G W V + + G C CG +L C+DID AET+ FA S+ LA++ E + +F
Sbjct: 305 QGWLGKGAWSVGWTEMGKDGTCQRCGERLVCIDIDPAETDNFANSLTELAIKLEAREDF 363
>gi|255570201|ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
gi|223534642|gb|EEF36338.1| multidrug resistance pump, putative [Ricinus communis]
Length = 589
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 176/299 (58%), Gaps = 25/299 (8%)
Query: 21 NPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT------- 73
+PE + +C+K +L A+ LY+ A +L+ HH+N LLYLCS+ ++
Sbjct: 103 SPEGVLRSKIDNCSKHGNLVEALRLYDEARINGVQLNQHHYNVLLYLCSSGSSVELGGNG 162
Query: 74 -DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFN 132
+ + + GF +F QM+ + V PNEA T+ ARLA + +D + AF+LIK+M F+
Sbjct: 163 ANEKASNMQFKRGFEIFQQMVIDKVPPNEATFTNAARLAIAMEDPEMAFDLIKQMKC-FD 221
Query: 133 VVPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVY 179
++P+LR+Y PALF FC+ A +AY EE E++ALLK+S R +KVY
Sbjct: 222 ILPKLRSYGPALFGFCKKGMADRAYAVDAHMAESGVMPEEPELSALLKLSVDIKRADKVY 281
Query: 180 QYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHGLGWI 236
+ L +LR+TVR V E T IIE WF + K+ D+ V+ V++ GGGWHG GW+
Sbjct: 282 EMLHRLRATVRQVTETTIDIIEAWFKSEDASKIGEEKWDVSKVREGVVRGGGGWHGQGWL 341
Query: 237 GQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
G G+W V R +D C SC +L C+DID +ETE FA S+ LA ++EVKA+F Q
Sbjct: 342 GSGQWRVVRTQIDAKAVCNSCSEKLVCIDIDPSETENFATSLTNLACQREVKADFVRFQ 400
>gi|242074900|ref|XP_002447386.1| hypothetical protein SORBIDRAFT_06g034140 [Sorghum bicolor]
gi|241938569|gb|EES11714.1| hypothetical protein SORBIDRAFT_06g034140 [Sorghum bicolor]
Length = 528
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 177/292 (60%), Gaps = 22/292 (7%)
Query: 21 NPETNFLISLQSCTKSKDLATAISLYESALSLN--FRLSLHHFNALLYLCSNSA---TDP 75
+PE L C+++ DL TA+ LY+ ALS + LSLHH+N LLYLCSN+A TD
Sbjct: 73 SPEGLLRHQLDMCSRNADLTTALRLYDDALSPDTPVPLSLHHYNCLLYLCSNAAATDTDT 132
Query: 76 SLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVP 135
+A + GF +F +M ++ V PNEA +TSVARLAA+ +D AF +++RM P
Sbjct: 133 DSSTAAAQRGFDIFARMEADGVQPNEATLTSVARLAAATRDPAMAFSVVRRMAAA-GTPP 191
Query: 136 RLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYL 182
RLR+Y PALF +C+ +A A EE E+ ALL+V+A G+ ++VY+ L
Sbjct: 192 RLRSYGPALFAYCDAKDADGAKQVEAHMDASGVVPEEPELAALLRVNADKGKADEVYRLL 251
Query: 183 QKLRSTVRCVNEETGKIIEDWFSGQKVN--GVS-CDLGLVKNAVLKNGGGWHGLGWIGQG 239
+ R+ VR V + T +++E WF + GV D VK V+K GGGWHG GW+G+G
Sbjct: 252 HRTRALVRQVCDTTAQVVEAWFRSDAASQAGVDKWDPSKVKEGVVKGGGGWHGQGWLGKG 311
Query: 240 KWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANF 291
W V +D+ G C CG +L C+DID +ET+ FA S+ LA+++EVK +F
Sbjct: 312 AWSVGWTEMDKDGTCQRCGEKLVCIDIDPSETDNFANSLTELAIKREVKEDF 363
>gi|218195893|gb|EEC78320.1| hypothetical protein OsI_18054 [Oryza sativa Indica Group]
Length = 557
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 184/317 (58%), Gaps = 26/317 (8%)
Query: 2 SNTTSANPSKPNKK-----RKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLN--F 54
+ TT+ + KPN+ R+ +PE L C++ DL TA++LYE+A+S +
Sbjct: 47 TTTTAESHPKPNESNAARRRRARDSPEGLLKAKLDMCSRDNDLPTALALYEAAISPDSLI 106
Query: 55 RLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASK 114
LSL H+N LLYLC+N+A S A + GF +F +M ++ V PNEA +T +ARLAA++
Sbjct: 107 PLSLGHYNCLLYLCANAAAADSSSPDAAQRGFDIFSRMEADGVQPNEATLTILARLAAAR 166
Query: 115 KDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQE 161
+D AF +++RM P LR+Y PALF +C+ +A A EE E
Sbjct: 167 RDPAMAFSIVRRMATA-GTAPHLRSYGPALFAYCDAGDADGATEVEAHMDASGVVPEEAE 225
Query: 162 ITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGL 218
+ ALL+V++ GR ++VY+ L + R +R V + T +++E WF+ + D
Sbjct: 226 LAALLRVNSARGRPDQVYRLLHRARVLLRQVADATAQLLESWFASHAASEAGLDHWDATK 285
Query: 219 VKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSV 278
VK + GGGWHG GW+G+G+W V R +D+ G C CG +L C+DID +ET FA+SV
Sbjct: 286 VKQGLRNGGGGWHGQGWLGKGQWTVARTDMDKDGTCHRCGEKLVCIDIDPSETHSFAESV 345
Query: 279 AALAMEQEVKANFSESQ 295
A +A+ ++ ANF + Q
Sbjct: 346 AQIAINRD--ANFVKFQ 360
>gi|388517681|gb|AFK46902.1| unknown [Medicago truncatula]
Length = 392
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/141 (62%), Positives = 102/141 (72%), Gaps = 3/141 (2%)
Query: 158 EEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS---C 214
EE EI ALLKVSA GR ++VY YL KLRS V CV E T +IE+WF + V
Sbjct: 9 EEAEIAALLKVSAKKGRADRVYMYLHKLRSGVTCVEESTATVIEEWFQSSEAREVGEGDL 68
Query: 215 DLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERF 274
D+ V+ AVL+NGGGWHGLGW+G+G WVV R SVD+ G CC CG QL CVDIDD E E+F
Sbjct: 69 DVTRVREAVLRNGGGWHGLGWVGKGDWVVSRMSVDDDGICCGCGEQLVCVDIDDEEMEKF 128
Query: 275 AQSVAALAMEQEVKANFSESQ 295
A SVAALA+E+EVKANFSE Q
Sbjct: 129 ASSVAALAVEREVKANFSEFQ 149
>gi|413936385|gb|AFW70936.1| hypothetical protein ZEAMMB73_755879 [Zea mays]
Length = 684
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 137/237 (57%), Gaps = 19/237 (8%)
Query: 77 LKDSALRHGFRVFDQMLSNN--VIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVV 134
L D A GF +FD+M S V +EA +T+ AR+A S DSD AFE++K+M +
Sbjct: 261 LGDYARARGFEIFDKMCSEKERVQMSEAALTAKARMALSMGDSDMAFEIVKQMKG-LGLK 319
Query: 135 PRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKVSAGTGRVEKVYQY 181
P+LR+Y PAL FC + +KA+E E E+ LL+ S R +KVY
Sbjct: 320 PKLRSYGPALTAFCNSGNVEKAFEVEAHMLESGITPEEAELETLLRASVVGRRGDKVYYL 379
Query: 182 LQKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQ 238
L K R+ VR V+ T ++ E WF + KV D G + A+ NGGGWHG GW+G+
Sbjct: 380 LHKFRTAVRQVSHSTAELFEAWFRSPTASKVGKRKWDAGAIAKAIENNGGGWHGFGWLGR 439
Query: 239 GKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
GKW V +++E+G C +CG +LA +D+D ETE FA VA LA+++E K+NF Q
Sbjct: 440 GKWTVAHSNINENGVCLACGEKLAIIDLDPKETEDFATFVAKLAIKRERKSNFENFQ 496
>gi|326509963|dbj|BAJ87198.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 588
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 150/262 (57%), Gaps = 23/262 (8%)
Query: 53 NFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAA 112
+ RL+ H +N LL+L + +A P +A R RVF ML P+EA +TS+AR+ A
Sbjct: 97 DLRLAAHQYNQLLHLLA-TAPFPGHPAAAAR---RVFAHMLGAGAAPSEATITSLARVVA 152
Query: 113 SKKDSDYA---FELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY------------ 157
+ D++ A F L+ M +++ + PRLR+Y P L F +A KAY
Sbjct: 153 ADADAEGADEAFALVSTMRDKYGLAPRLRSYSPVLAAFRRAGDAGKAYAVEAHMAASAVS 212
Query: 158 -EEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS--- 213
EE E+ ALL+VSA G +KVY+Y+ KLR V CV EET +++E WF ++
Sbjct: 213 PEEPEVAALLEVSAKAGDADKVYEYMHKLRRAVGCVTEETAEVLEGWFRSEEAAAAGKAE 272
Query: 214 CDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETER 273
D VK A++ GGG H LGW+ G W V+R V G+C CG +LA VDID +T +
Sbjct: 273 WDACRVKEAIVAKGGGCHQLGWLRTGPWTVQRVRVAADGECGGCGCRLASVDIDMEDTHK 332
Query: 274 FAQSVAALAMEQEVKANFSESQ 295
FA S++ LA+E+E KANFS Q
Sbjct: 333 FADSISGLALERETKANFSHFQ 354
>gi|222619946|gb|EEE56078.1| hypothetical protein OsJ_04901 [Oryza sativa Japonica Group]
Length = 484
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 150/259 (57%), Gaps = 14/259 (5%)
Query: 43 ISLYESALSLN--FRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPN 100
++ ++SALS RL H +N L +L + + D SL ++A RVF ML + P+
Sbjct: 1 MAAFDSALSGPDAPRLLAHQYNQLFHLLATADAD-SLPNAAAA-ARRVFSHMLGSGASPS 58
Query: 101 EALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQK-AYEE 159
EA +TS+AR+ AS + A + F++V +R + ++EA A EE
Sbjct: 59 EATITSLARVTASDASNPAA------ADEAFDLVATMRDKPGKAYAVDAHMEASAVAPEE 112
Query: 160 QEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKV---NGVSCDL 216
EI ALL VSA G +KVY+Y+ KL TV CV EET +++E WF K D
Sbjct: 113 PEIAALLDVSAKAGDADKVYEYMHKLSRTVDCVGEETAEVLEGWFRSGKAAMAGKAEWDA 172
Query: 217 GLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQ 276
VK+A++ NGGG H LGW+G G W V+R V G+C CG +LACVDID ET+RFA
Sbjct: 173 CKVKDAIVANGGGCHRLGWLGTGPWTVQRVRVGGDGQCEGCGCRLACVDIDVEETQRFAD 232
Query: 277 SVAALAMEQEVKANFSESQ 295
SVA+LA+++E K NFS+ Q
Sbjct: 233 SVASLALQRETKINFSQFQ 251
>gi|356511361|ref|XP_003524395.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32230, mitochondrial-like [Glycine max]
Length = 540
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 159/323 (49%), Gaps = 61/323 (18%)
Query: 14 KKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT 73
KK+K +PE L C+K D+ A+SLY+SA+S +L HH+ LL+LCS++A
Sbjct: 16 KKKKDKDSPEVKLKNGLDMCSKRGDVMGALSLYDSAISEGVKLGQHHYTLLLFLCSSAAV 75
Query: 74 -------------------------DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVA 108
+K AL+ GF+V++ M + V NEA
Sbjct: 76 GVVRPAKSGSGARTLNALVSSNELVSEDVKRYALQRGFQVYENMRVDKVQMNEA------ 129
Query: 109 RLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY----------- 157
D AFE++K+M LR+Y PAL FC N E KA+
Sbjct: 130 ------AXGDMAFEMVKQMX--------LRSYGPALSTFCNNGEIDKAFAVEKHMLXHGV 175
Query: 158 --EEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS-- 213
EE E+ AL +VS G G +K+Y L KLR VR V+ TG +I D F ++ + V
Sbjct: 176 YPEEPELEALSRVSVGAGNSDKIYYVLHKLRIIVRKVSPTTGSLIFDLFKNKQASRVGKR 235
Query: 214 -CDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETE 272
D L+ A NGGG HG GW+G+GKW V ++ G C CG QL +D+D ET+
Sbjct: 236 KWDKRLIMEATENNGGGRHGQGWLGKGKWEVVHTTIGNDGLCKCCGVQLTTIDLDPVETQ 295
Query: 273 RFAQSVAALAMEQEVKANFSESQ 295
FA VA+LA+ +E +NF + Q
Sbjct: 296 NFANLVASLAVMREKGSNFQKFQ 318
>gi|326517014|dbj|BAJ96499.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 544
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 150/262 (57%), Gaps = 23/262 (8%)
Query: 53 NFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAA 112
+ RL+ H +N LL+L + +A P +A R RVF ML P+EA +TS+AR+ A
Sbjct: 53 DLRLAAHQYNQLLHLLA-TAPFPGHPAAAAR---RVFAHMLGAGAAPSEATITSLARVVA 108
Query: 113 SKKDSDYA---FELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY------------ 157
+ D++ A F L+ M +++ + PRLR+Y P L F +A KAY
Sbjct: 109 ADADAEGADEAFALVSTMRDKYGLAPRLRSYSPVLAAFRRAGDAGKAYAVEAHMAASAVS 168
Query: 158 -EEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS--- 213
EE E+ ALL+VSA G +KVY+Y+ KLR V CV EET +++E WF ++
Sbjct: 169 PEEPEVAALLEVSAKAGDADKVYEYMHKLRRAVGCVTEETAEVLEGWFRSEEAAAAGKAE 228
Query: 214 CDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETER 273
D VK A++ GGG H LGW+ G W V+R V G+C CG +LA VDID +T +
Sbjct: 229 WDACRVKEAIVAKGGGCHQLGWLRTGPWTVQRVRVAADGECGGCGCRLASVDIDMEDTHK 288
Query: 274 FAQSVAALAMEQEVKANFSESQ 295
FA S++ LA+E+E KANFS Q
Sbjct: 289 FADSISGLALERETKANFSHFQ 310
>gi|222629843|gb|EEE61975.1| hypothetical protein OsJ_16752 [Oryza sativa Japonica Group]
Length = 783
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 182/318 (57%), Gaps = 27/318 (8%)
Query: 2 SNTTSANPSKPNKK------RKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLN-- 53
+ TT+ + KPN+ + PE L C++ DL TA++LYE+A+S +
Sbjct: 272 TTTTAESHPKPNESNAARRRPRPRLAPEGLLKAKLDMCSRDNDLPTALALYEAAISPDSL 331
Query: 54 FRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAAS 113
LSL H+N LLYLC+N+A S A + GF +F +M ++ V PNEA +T +ARLAA+
Sbjct: 332 IPLSLGHYNCLLYLCANAAAADSSSPDAAQRGFDIFSRMEADGVQPNEATLTILARLAAA 391
Query: 114 KKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQ 160
++D AF +++RM P LR+Y PALF +C+ +A A EE
Sbjct: 392 RRDPAMAFSIVRRMATA-GTAPHLRSYGPALFAYCDAGDADGATEVEAHMDASGVVPEEA 450
Query: 161 EITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLG 217
E+ ALL+V++ GR ++VY+ L + R +R V + T +++E WF+ + D
Sbjct: 451 ELAALLRVNSARGRPDQVYRLLHRARVLLRQVADATAQLLESWFASHAASEAGLDHWDAT 510
Query: 218 LVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQS 277
VK + GGGWHG GW+G+G+W V R +D+ G C CG +L C+DID +ET FA+S
Sbjct: 511 KVKQGLRNGGGGWHGQGWLGKGQWTVARTDMDKDGTCHRCGEKLVCIDIDPSETHSFAES 570
Query: 278 VAALAMEQEVKANFSESQ 295
VA +A+ ++ ANF + Q
Sbjct: 571 VAQIAINRD--ANFVKFQ 586
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 109/192 (56%), Gaps = 19/192 (9%)
Query: 120 AFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALL 166
AF +++RM P LR+Y PALF +C+ +A A EE E+ ALL
Sbjct: 2 AFSIVRRMATA-GTAPHLRSYGPALFAYCDAGDADGATEVEAHMDASGVVPEEAELAALL 60
Query: 167 KVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGLVKNAV 223
+V++ GR ++VY+ L + R +R V + T +++E WF+ + D VK +
Sbjct: 61 RVNSARGRPDQVYRLLHRARVLLRQVADATAQLLESWFASHAASEAGLDHWDATKVKQGL 120
Query: 224 LKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAM 283
GGGWHG GW+G+G+W V R +D+ G C CG +L C+DID +ET FA+SVA +A+
Sbjct: 121 RNGGGGWHGQGWLGKGQWTVARTDMDKDGTCHRCGEKLVCIDIDPSETHSFAESVAQIAI 180
Query: 284 EQEVKANFSESQ 295
++ ANF + Q
Sbjct: 181 NRD--ANFVKFQ 190
>gi|242064790|ref|XP_002453684.1| hypothetical protein SORBIDRAFT_04g010320 [Sorghum bicolor]
gi|241933515|gb|EES06660.1| hypothetical protein SORBIDRAFT_04g010320 [Sorghum bicolor]
Length = 632
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 139/237 (58%), Gaps = 19/237 (8%)
Query: 77 LKDSALRHGFRVFDQMLSNN--VIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVV 134
L++ A GF +F++M S V +EA +T+ AR+A S DSD AFE++K+M + +
Sbjct: 306 LREYACARGFEIFEKMCSEKERVQMSEAALTAKARMALSMGDSDMAFEIVKQMKD-LGLK 364
Query: 135 PRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKVSAGTGRVEKVYQY 181
P+LR+Y PAL FC +KA+E E E+ LL+ S R +KVY
Sbjct: 365 PKLRSYGPALTAFCNGGNVEKAFEVEAHMLESGITPEEAELETLLRASVVGRRGDKVYYL 424
Query: 182 LQKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQ 238
+ K R+TVR V+ T ++ E WF + KV D G + A+ NGGGWHG GW+G+
Sbjct: 425 MHKFRTTVRQVSPSTAELFEVWFRSPTASKVGKRKWDTGAIVKAIENNGGGWHGFGWLGR 484
Query: 239 GKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
GKW V R +++++G C +CG +LA +D+D ETE FA VA LA+++E +NF Q
Sbjct: 485 GKWTVTRSNINKNGVCLACGEKLAIIDLDPKETEDFATFVAKLAIKRERNSNFENFQ 541
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 28 ISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSA 72
+ L C+K D+ AI+LY+SA+ RL HH+N LLYLCS+++
Sbjct: 188 VELDMCSKRGDVMGAIALYDSAVEEGVRLGQHHYNVLLYLCSSAS 232
>gi|147855560|emb|CAN79167.1| hypothetical protein VITISV_031236 [Vitis vinifera]
Length = 696
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 166/311 (53%), Gaps = 45/311 (14%)
Query: 1 MSNTTSANPSKPNKKRKT--NPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSL 58
+ +++A + NK RK +PE C+K D+ A+ LY+ A S LS
Sbjct: 388 IPESSAAAKTMSNKTRKKARRESPEGVLRFKTDMCSKHGDVVEALHLYDEARSRGVPLSQ 447
Query: 59 HHFNALLYLCSNSAT--DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKD 116
H++N LLYLCS S + D ++ + AL+ GF +F QM + + PNEA TS RLA + +D
Sbjct: 448 HNYNVLLYLCSCSGSNGDENVVNLALKRGFEIFKQMGVDGIEPNEATFTSATRLACAMED 507
Query: 117 SDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQEIT 163
+ AF L+K+M + + P+LR+Y P LF FC+ +A +AY EE E+
Sbjct: 508 PEMAFNLVKQMKS-CGIPPKLRSYGPPLFRFCKKGDADRAYEVDAHMVESGVVAEEPELC 566
Query: 164 ALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAV 223
ALL +S + V++V++ + LR++VR V+E T +++E WF+ + V
Sbjct: 567 ALLGLSVESRWVDQVHEMMHHLRASVRQVSESTAEVVERWFNSEDAARV----------- 615
Query: 224 LKNGGGWHGLGWIGQGKWVVKR---GSVDESGKCCSCGNQLACVDIDDAETERFAQSVAA 280
G+ W V + +DE+G C SCG +L +DID ETE FA S+
Sbjct: 616 -------------GEENWDVGKVVGTEMDEAGVCQSCGEKLVGIDIDPRETENFASSLTK 662
Query: 281 LAMEQEVKANF 291
LA ++EVKA+F
Sbjct: 663 LACQREVKADF 673
>gi|357131791|ref|XP_003567517.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Brachypodium distachyon]
Length = 603
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/263 (40%), Positives = 142/263 (53%), Gaps = 20/263 (7%)
Query: 53 NFRLSLHHFNALLYLCSNS--ATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVT-SVAR 109
+ R + H +N LL+L +++ ++ P + RVF ML S+AR
Sbjct: 114 DLRFAAHQYNQLLHLLASADRSSFPGGHPAVAASARRVFAHMLEATTAAPAEATITSLAR 173
Query: 110 LAASKKDS-DYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY----------- 157
+ AS D AFEL+ M + + PRLR+Y P L F EA KAY
Sbjct: 174 VIASDPGGGDEAFELVATMRERYGLAPRLRSYGPVLAAFRRTGEAGKAYAVEAHMAASAV 233
Query: 158 --EEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKV---NGV 212
EE E+ ALL VSA G +KVY+Y+ KLR V CV+ ET +++E WF +K
Sbjct: 234 SPEEPELAALLDVSAKAGDADKVYEYMHKLRRAVACVSLETAEVLEGWFQSEKAAMAGKA 293
Query: 213 SCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETE 272
D VK+A++ NGGG H LGW+ G WVV+R +V G+C CG LA VDID ET+
Sbjct: 294 EWDAQQVKDAIVANGGGCHQLGWLQNGPWVVRRATVGTDGECGGCGCCLASVDIDMEETQ 353
Query: 273 RFAQSVAALAMEQEVKANFSESQ 295
FA SV+ LA+E+E KANFS Q
Sbjct: 354 TFADSVSGLALERETKANFSHFQ 376
>gi|224119796|ref|XP_002331163.1| predicted protein [Populus trichocarpa]
gi|222873246|gb|EEF10377.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 166/288 (57%), Gaps = 18/288 (6%)
Query: 23 ETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSAL 82
E + L C+K D+ AI LY+ A ++ +H+ LLYLCS++A +K AL
Sbjct: 12 ELKLRVRLDMCSKRGDVIAAIQLYDLAQREGIKMGQYHYAVLLYLCSSAAFSEDVKKYAL 71
Query: 83 RHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDP 142
+ G +F++M V NEA +T+VAR+A S + D AFE++K+M+ + P+LR+Y P
Sbjct: 72 QRGCEIFEKMCKEKVPINEATLTAVARMAMSIGNGDLAFEMVKQMD-ALGINPKLRSYGP 130
Query: 143 ALFCFC--ENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQKLRS 187
AL FC +++ KA+ EE E+ ALL+VS G+ +KVY L KLR
Sbjct: 131 ALSVFCSSGDID--KAFYVEKHMLEHGVYPEEPELKALLRVSVEGGKGDKVYYLLHKLRR 188
Query: 188 TVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGS 247
VR V+ T II WF+ + + V VK A+ GGGWHG GW+G+GKW V S
Sbjct: 189 IVRRVSPSTAGIIVRWFNSKAASRVGKTKWDVKEAIENGGGGWHGQGWLGKGKWTVSCTS 248
Query: 248 VDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
V G C CG +L +D+D ETE+FA+SVA++A++++ ++F Q
Sbjct: 249 VGLDGICKYCGQKLTTIDLDAVETEKFAESVASIAIKRDRDSSFQRFQ 296
>gi|168063907|ref|XP_001783909.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664592|gb|EDQ51306.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 522
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 170/295 (57%), Gaps = 27/295 (9%)
Query: 22 PETNFLISLQSCTKSKDLATAISLYESALSLN-FRLSLHHFNALLYLCSNSATD---PSL 77
PE + +L C+K D+ A+ +Y+ + +++N +LYLCS++ATD P
Sbjct: 31 PEQDLRRALDMCSKHADVKQALEIYDKTCKEGKIAFNQYNYNIILYLCSSAATDSLKPQK 90
Query: 78 KDSAL--RHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVP 135
K L + GF V++ M S V PNEA T+VARLA +K+D D AF+++K+M E N+ P
Sbjct: 91 KQRILYMKRGFEVYEAMKSQGVPPNEATFTAVARLAVAKEDGDLAFDMVKQM-AEANLSP 149
Query: 136 RLRTYDPALFCFCENLEAQKAYEEQE-------------ITALLKVSAGTGRVEKVYQYL 182
RLR+Y PAL+ +C+ +KA+E + + ALLKVS G G +KVY L
Sbjct: 150 RLRSYAPALYTYCKLKNHKKAFEVDDHMKKSGVALEESELEALLKVSVGAGLEDKVYSLL 209
Query: 183 QKLRSTVRCVNEETGKIIEDWF--SGQKVNGVSCDLGL-----VKNAVLKNGGGWHGLGW 235
+LR+TVR V+ ++I+ WF S G S L VK A GGGWHGLGW
Sbjct: 210 HRLRTTVRDVSPSAVEVIQQWFTSSAAATAGKSNWEHLPGPEYVKKATESCGGGWHGLGW 269
Query: 236 IGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKAN 290
+G+G W VK VD+ G C CG LA +D+D ETE FAQS++ +A ++E K N
Sbjct: 270 LGRGTWEVKSSVVDDHGVCQECGEPLATIDLDPQETEMFAQSLSRMACQREAKNN 324
>gi|449465334|ref|XP_004150383.1| PREDICTED: proteinaceous RNase P 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
gi|449506617|ref|XP_004162799.1| PREDICTED: proteinaceous RNase P 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 633
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 145/243 (59%), Gaps = 17/243 (6%)
Query: 69 SNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMN 128
SN D K AL GF ++++M + N+ NEA +TSVAR+A S D D AF+++K+M
Sbjct: 191 SNILVDEDFKKYALETGFEIYEKMCAENIPMNEATLTSVARMAMSMGDGDKAFDMVKQM- 249
Query: 129 NEFNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRV 175
+ PRLR+Y PAL FC+N + +KA+ EE E+ ALL+VS
Sbjct: 250 KPLGLNPRLRSYGPALSTFCKNGKLEKAFSVEKHMLEHGVYPEEPELAALLRVSINASNA 309
Query: 176 EKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHG 232
EKVY L KLR++VR V T +I WF + +V V D ++K A+ GGGWHG
Sbjct: 310 EKVYYLLHKLRTSVRQVLPSTADLIITWFKSKDAARVGKVKLDRKIIKKAIGNGGGGWHG 369
Query: 233 LGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFS 292
LGW+G+GKW V +V + G C SCG +LA +D+D ETE FA+SVAA+ ++E ++F
Sbjct: 370 LGWLGRGKWSVSSTNVGKDGLCKSCGEKLATIDLDPIETENFAESVAAIVTQREKNSSFQ 429
Query: 293 ESQ 295
+ Q
Sbjct: 430 KFQ 432
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 21 NPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSA 72
N ET F +L C+K+ D AI LYE A L +H+ +LYLCS++A
Sbjct: 46 NNETPFRANLDMCSKTGDFIGAIKLYEWAQKEGINLEQYHYAVILYLCSSAA 97
>gi|167998708|ref|XP_001752060.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697158|gb|EDQ83495.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 552
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 166/300 (55%), Gaps = 26/300 (8%)
Query: 15 KRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLN-FRLSLHHFNALLYLCSNSAT 73
K+K +P E+ S+ C+K D AI +Y+ ++ + + +N LLYLCS+ AT
Sbjct: 21 KKKRDPA-ESELRRSIDMCSKHADAMGAIEIYDKVVAEGKMSFNQYSYNVLLYLCSSGAT 79
Query: 74 ---DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNE 130
K L+ GF V++ M V PNEA T+VARLA +K D D AF+++K+M
Sbjct: 80 VVLTDEQKQLCLQRGFAVYEAMKLQGVPPNEATFTAVARLAVAKDDGDLAFDMVKQMAKA 139
Query: 131 FNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEK 177
+ PRLR+Y PAL +C+ +KA+ EE E+ ALLK++A G +K
Sbjct: 140 -KLSPRLRSYSPALHTYCKLKNIEKAFEVDEHMLAAGVQPEESELEALLKLTADAGLEDK 198
Query: 178 VYQYLQKLRSTVRCVNEETGKIIEDWF-SGQKVNGVSCDLG------LVKNAVLKNGGGW 230
VY L ++R+TVR ++ T +++ WF S N + VK A GGGW
Sbjct: 199 VYPLLHRIRTTVRGLSPSTAGVVQQWFESSAGANAGKSNWNSLPSQETVKAAYESRGGGW 258
Query: 231 HGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKAN 290
HGLGW+G+G W VK +D +G C CG QL +DID ET FA+S++ LA ++E K+N
Sbjct: 259 HGLGWLGRGSWEVKPSELDANGVCQECGEQLVTIDIDPKETVMFAKSLSELACQREGKSN 318
>gi|357139247|ref|XP_003571195.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Brachypodium distachyon]
Length = 729
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 170/343 (49%), Gaps = 76/343 (22%)
Query: 28 ISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLC--------------SNSAT 73
++L C+K D+ AI+LY+SA+ R+ HH+N LLYLC S
Sbjct: 190 VALDLCSKRGDVIGAINLYDSAVKEGIRMGQHHYNVLLYLCSSAALGIVQPAKSGSAGKL 249
Query: 74 DPS-------------------------------------------LKDSALRHGFRVFD 90
DP+ +++ A GF +F+
Sbjct: 250 DPASVESSGHPEDSNVPEGHVQNQEGNETILFPSVQIGSSIPVSDEIREYARTRGFEIFE 309
Query: 91 QMLS--NNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFC 148
+M S V ++A +T VAR+A S + D AFE++K+M E + P+LR+Y PAL FC
Sbjct: 310 KMCSEKERVAMSKAALTGVARMATSMGNGDMAFEIVKQM-KELGITPKLRSYGPALTAFC 368
Query: 149 ENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEE 195
++ +KA+ EE E+ LL+ S R ++VY L K R+TVR V+
Sbjct: 369 DSGNVEKAFEVEAHMLESGVTPEEPELEMLLRASVVARRGDRVYYLLHKFRNTVRQVSPS 428
Query: 196 TGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESG 252
T + IE WF + KV D + + +GGGWHGLGW+G+GKW + R +D++G
Sbjct: 429 TAEQIEAWFRSSTASKVGKRKWDACALAKEIENHGGGWHGLGWLGRGKWTITRSHIDKNG 488
Query: 253 KCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
C +CG +LA +D+D ETE FA VA LA+++E +NF Q
Sbjct: 489 VCLACGGKLAIIDLDPKETEDFATLVATLALKRERTSNFDNFQ 531
>gi|302759989|ref|XP_002963417.1| hypothetical protein SELMODRAFT_80247 [Selaginella moellendorffii]
gi|300168685|gb|EFJ35288.1| hypothetical protein SELMODRAFT_80247 [Selaginella moellendorffii]
Length = 536
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 172/303 (56%), Gaps = 24/303 (7%)
Query: 6 SANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL 65
+++PS +K+K N E F +L +C+K D+ A+S Y S + L+++N LL
Sbjct: 51 ASSPSP--RKKKFNLVSEVRF--TLDTCSKFGDVNGALSAYSSNREA-VKFDLYNYNVLL 105
Query: 66 YLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIK 125
YLCS++A + D LR G +F+QM + NV PNEA T++ARL+ +K+D D AFE++K
Sbjct: 106 YLCSSAALG-EMMDGFLRKGLEIFEQMQAENVAPNEATFTALARLSVAKRDGDLAFEIVK 164
Query: 126 RMNNEFNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGT 172
M + P+LR Y PAL+ + + + +KA+ EE E+ LL +S+
Sbjct: 165 AMIAA-KIPPKLRCYGPALYVYFKRNDPEKAFEVYNHMLVHGVQPEEAELEVLLHLSSKA 223
Query: 173 GRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGL-VKNAVLKNGG 228
++VY L LR TVR V++ T +IE WF +V G S V+ + L GG
Sbjct: 224 CLGDRVYLLLHHLRETVRDVSQSTVSVIERWFKSDFAGRVTGNSLPGDFDVRCSSLAKGG 283
Query: 229 GWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVK 288
GWHGLGW+GQG+W V S+ G CC C Q+ +DI +T+ FA+ +A+LA ++E
Sbjct: 284 GWHGLGWLGQGRWNVGYTSLTAEGVCCRCNEQMVTIDITPEDTDVFAKCIASLAFKRESN 343
Query: 289 ANF 291
+F
Sbjct: 344 NSF 346
>gi|168007180|ref|XP_001756286.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692325|gb|EDQ78682.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 526
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 169/303 (55%), Gaps = 27/303 (8%)
Query: 13 NKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLN-FRLSLHHFNALLYLCSNS 71
N K+K + + E+ S+ C+K D+ AI +Y+ ++ + + +N LLYLCS++
Sbjct: 19 NHKKKKD-SAESELRRSIDMCSKFADVMGAIEIYDKVVAEGKVAFNQYTYNVLLYLCSSA 77
Query: 72 ATDPSLKDSA----LRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRM 127
AT+ + D L GF +++ M V PNEA T+VARLA +K+D D AF+++K+M
Sbjct: 78 ATEVVVTDEERRLCLERGFVIYEAMKLQEVPPNEATFTAVARLAVAKEDGDLAFDMVKQM 137
Query: 128 NNEFNVVPRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGR 174
N + PRLR+Y PAL +C+ +KA+ EE E+ ALL+++ G
Sbjct: 138 ANA-KLSPRLRSYSPALHIYCKLKNFEKAFEVEEHMLAAGVQAEESELEALLQLATDFGL 196
Query: 175 VEKVYQYLQKLRSTVRCVNEETGKIIEDWF------SGQKVNGVSC-DLGLVKNAVLKNG 227
KVY L ++R+TVR ++ +++ WF S K N S VK A G
Sbjct: 197 EYKVYSLLHRIRTTVRGLSPSCAGVVQQWFESSPAASAGKSNWDSLPSPKTVKAAYESRG 256
Query: 228 GGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEV 287
GGWHGLGW+G+G W VK +D G C CG QL +DID ETE FA+S++ LA ++E
Sbjct: 257 GGWHGLGWLGRGNWEVKSSVLDTGGVCQECGQQLVTIDIDPNETEMFAKSLSELACQREG 316
Query: 288 KAN 290
K N
Sbjct: 317 KNN 319
>gi|359484351|ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Vitis vinifera]
Length = 816
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 140/235 (59%), Gaps = 17/235 (7%)
Query: 77 LKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPR 136
K ALR GF ++++M V NEA +TSVAR+A S + D AF+++K+M + PR
Sbjct: 306 FKKYALRRGFEIYEKMCLEKVPMNEATLTSVARMAMSMGNGDMAFDMVKQM-KPLGINPR 364
Query: 137 LRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQ 183
LR+Y PAL FC N + +KA+ EE E+ ALL+V G+ +KVY L
Sbjct: 365 LRSYGPALSAFCNNGDIEKAFGVEEHMLEHGVYPEEPELEALLRVGIEAGKSDKVYYVLH 424
Query: 184 KLRSTVRCVNEETGKIIEDWFSGQKVNGV---SCDLGLVKNAVLKNGGGWHGLGWIGQGK 240
KLR++VR V+ T +IE WF + D L+ A++ GGGWHG GW+G+GK
Sbjct: 425 KLRTSVRQVSHSTANLIEKWFKSNAAAAAGKGNWDQRLISEAIVNGGGGWHGQGWLGKGK 484
Query: 241 WVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
W V +V G C CG +LA +D+D ETE+FA+SVA++A+++E ++F + Q
Sbjct: 485 WNVSHTNVGADGLCLCCGEKLATIDLDPTETEKFAESVASIAIKREKNSSFQKFQ 539
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 28 ISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSA 72
+ L+ C+K+ D+ A+ LY+SAL L +H+ LLYLCS++A
Sbjct: 121 VGLEMCSKNGDVMGALELYDSALREGIELGQYHYTVLLYLCSSAA 165
>gi|297738805|emb|CBI28050.3| unnamed protein product [Vitis vinifera]
Length = 751
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 140/235 (59%), Gaps = 17/235 (7%)
Query: 77 LKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPR 136
K ALR GF ++++M V NEA +TSVAR+A S + D AF+++K+M + PR
Sbjct: 241 FKKYALRRGFEIYEKMCLEKVPMNEATLTSVARMAMSMGNGDMAFDMVKQM-KPLGINPR 299
Query: 137 LRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQ 183
LR+Y PAL FC N + +KA+ EE E+ ALL+V G+ +KVY L
Sbjct: 300 LRSYGPALSAFCNNGDIEKAFGVEEHMLEHGVYPEEPELEALLRVGIEAGKSDKVYYVLH 359
Query: 184 KLRSTVRCVNEETGKIIEDWFSGQKVNGV---SCDLGLVKNAVLKNGGGWHGLGWIGQGK 240
KLR++VR V+ T +IE WF + D L+ A++ GGGWHG GW+G+GK
Sbjct: 360 KLRTSVRQVSHSTANLIEKWFKSNAAAAAGKGNWDQRLISEAIVNGGGGWHGQGWLGKGK 419
Query: 241 WVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
W V +V G C CG +LA +D+D ETE+FA+SVA++A+++E ++F + Q
Sbjct: 420 WNVSHTNVGADGLCLCCGEKLATIDLDPTETEKFAESVASIAIKREKNSSFQKFQ 474
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 11 KPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSN 70
K +KK K + + E + L+ C+K+ D+ A+ LY+SAL L +H+ LLYLCS+
Sbjct: 105 KGSKKNKVD-SQEGLLRVGLEMCSKNGDVMGALELYDSALREGIELGQYHYTVLLYLCSS 163
Query: 71 SA 72
+A
Sbjct: 164 AA 165
>gi|255546443|ref|XP_002514281.1| multidrug resistance pump, putative [Ricinus communis]
gi|223546737|gb|EEF48235.1| multidrug resistance pump, putative [Ricinus communis]
Length = 745
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 143/235 (60%), Gaps = 17/235 (7%)
Query: 77 LKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPR 136
+K AL GF ++++M + + NEA +T+VAR+A S + D AF+++K+M + PR
Sbjct: 236 IKKYALERGFEIYEKMCMDKIPMNEATLTAVARIAMSMGNGDMAFDMVKQM-KLLGLNPR 294
Query: 137 LRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQ 183
LR+Y PAL FC + +A KA+ EE E+ ALL+VS G+ +KVY L
Sbjct: 295 LRSYGPALAAFCSSGDADKAFTVEKHMLDHGVHPEEPELEALLRVSVEAGKGDKVYYLLH 354
Query: 184 KLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGK 240
KLR++VR V+ T II +WF + +V D +VK A+ GGGWHG GW+G+GK
Sbjct: 355 KLRTSVRKVSPSTANIIIEWFKSKAASRVGKTKWDKRVVKEAIANGGGGWHGQGWLGKGK 414
Query: 241 WVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
W V SV C SCG +LA +D+D ETE FA+SVA++A+++E ++F + Q
Sbjct: 415 WTVSCSSVGVDAFCKSCGKKLATIDLDPTETESFAESVASIAIKREKDSSFQKFQ 469
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 11 KPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSN 70
K +K+ K +P E F + L C K D+ AI LY+ A ++ +H+ LLYLCS+
Sbjct: 43 KWSKRNKGDPQ-EVKFRLELDKCCKRGDVMAAIQLYDLAQREGIKMGQYHYTVLLYLCSS 101
Query: 71 SA 72
+A
Sbjct: 102 AA 103
>gi|414878559|tpg|DAA55690.1| TPA: antiporter/ drug transporter/ transporter [Zea mays]
Length = 599
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 137/270 (50%), Gaps = 41/270 (15%)
Query: 55 RLSLHHFNALLYLCSNSATD----PSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARL 110
RLS H +N LL+L + ATD PS +A R RVF ML P+EA +TS+AR+
Sbjct: 109 RLSAHQYNQLLHLLA--ATDRSSFPSPPAAAAR---RVFAHMLQAAAPPSEATITSLARV 163
Query: 111 AASKKDS--DYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY----------- 157
A+ S D AFEL+ M +++ + PRLR+Y P L F EA KAY
Sbjct: 164 IAADPASAADEAFELVATMKDKYGLSPRLRSYGPVLAAFRRAGEAAKAYAVEAHMTASGV 223
Query: 158 --EEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS-- 213
EE E+ ALL VS+ G +KVY+Y+ KLR V CV+EET ++E WF +
Sbjct: 224 SPEEPELAALLDVSSRAGDADKVYEYMHKLRQAVHCVSEETAGVVEAWFRSDEAATAGKP 283
Query: 214 -CDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVD-------ESGKCCSCGNQLACVD 265
D VK+A++ NGGG WV ++D ++ +C C LAC+D
Sbjct: 284 QWDAAQVKDAIVANGGG-------CPPPWVAWNPALDRAAGKSGDADQCGGCRFHLACID 336
Query: 266 IDDAETERFAQSVAALAMEQEVKANFSESQ 295
ID + LA+E+E K NFS Q
Sbjct: 337 IDMERHRGLLIPLLGLALERETKTNFSRFQ 366
>gi|222622584|gb|EEE56716.1| hypothetical protein OsJ_06217 [Oryza sativa Japonica Group]
Length = 711
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 140/237 (59%), Gaps = 19/237 (8%)
Query: 77 LKDSALRHGFRVFDQMLS--NNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVV 134
L++ A GF +F++M S V NE+ +T+VAR+A S + D AF+++K+M ++ +
Sbjct: 284 LREYARTRGFEIFEKMRSEEEKVPMNESALTAVARMAMSMGNGDMAFDVVKQMKDQ-GIA 342
Query: 135 PRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQY 181
P+LR+Y PAL FC + +KA+ EE E+ LLK S + +KVY
Sbjct: 343 PKLRSYGPALTAFCNSGNVEKAFEVEAHMLESGVRPEEPELETLLKASVAAQQGDKVYYL 402
Query: 182 LQKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQ 238
L K R+TVR + T K++EDWF + KV D G + A+ NGGGWHGLGW+G+
Sbjct: 403 LHKFRTTVRQASSTTAKLLEDWFQSPTASKVGKRKWDSGAITKAIENNGGGWHGLGWLGR 462
Query: 239 GKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
GKW + +D +G C +CG +L +D+D ETE FA VA LA+++E ++NF Q
Sbjct: 463 GKWTISHSHIDRNGACLACGEKLTIIDLDPKETEDFATLVAKLAIKRERRSNFDNFQ 519
>gi|218190470|gb|EEC72897.1| hypothetical protein OsI_06719 [Oryza sativa Indica Group]
Length = 719
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 140/237 (59%), Gaps = 19/237 (8%)
Query: 77 LKDSALRHGFRVFDQMLS--NNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVV 134
L++ A GF +F++M S V NE+ +T+VAR+A S + D AF+++K+M ++ +
Sbjct: 299 LREYARTRGFEIFEKMRSEEEKVPMNESALTAVARMAMSMGNGDMAFDVVKQMKDQ-GIA 357
Query: 135 PRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQY 181
P+LR+Y PAL FC + +KA+ EE E+ LLK S + +KVY
Sbjct: 358 PKLRSYGPALTAFCNSGNVEKAFEVEAHMLESGVRPEEPELETLLKASVAAQQGDKVYYL 417
Query: 182 LQKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQ 238
L K R+TVR + T K++EDWF + KV D G + A+ NGGGWHGLGW+G+
Sbjct: 418 LHKFRTTVRQASSTTAKLLEDWFQSPTASKVGKRKWDAGAITKAIENNGGGWHGLGWLGR 477
Query: 239 GKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
GKW + +D +G C +CG +L +D+D ETE FA VA LA+++E ++NF Q
Sbjct: 478 GKWTISHSHIDRNGACLACGEKLTIIDLDPKETEDFATLVAKLAIKRERRSNFDNFQ 534
>gi|115445507|ref|NP_001046533.1| Os02g0273800 [Oryza sativa Japonica Group]
gi|47848046|dbj|BAD21831.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536064|dbj|BAF08447.1| Os02g0273800 [Oryza sativa Japonica Group]
gi|215697065|dbj|BAG91059.1| unnamed protein product [Oryza sativa Japonica Group]
gi|326324779|dbj|BAJ84577.1| P0413A11.14-1 [Oryza sativa Indica Group]
Length = 719
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 140/237 (59%), Gaps = 19/237 (8%)
Query: 77 LKDSALRHGFRVFDQMLS--NNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVV 134
L++ A GF +F++M S V NE+ +T+VAR+A S + D AF+++K+M ++ +
Sbjct: 299 LREYARTRGFEIFEKMRSEEEKVPMNESALTAVARMAMSMGNGDMAFDVVKQMKDQ-GIA 357
Query: 135 PRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQY 181
P+LR+Y PAL FC + +KA+ EE E+ LLK S + +KVY
Sbjct: 358 PKLRSYGPALTAFCNSGNVEKAFEVEAHMLESGVRPEEPELETLLKASVAAQQGDKVYYL 417
Query: 182 LQKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQ 238
L K R+TVR + T K++EDWF + KV D G + A+ NGGGWHGLGW+G+
Sbjct: 418 LHKFRTTVRQASSTTAKLLEDWFQSPTASKVGKRKWDSGAITKAIENNGGGWHGLGWLGR 477
Query: 239 GKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
GKW + +D +G C +CG +L +D+D ETE FA VA LA+++E ++NF Q
Sbjct: 478 GKWTISHSHIDRNGACLACGEKLTIIDLDPKETEDFATLVAKLAIKRERRSNFDNFQ 534
>gi|302776824|ref|XP_002971555.1| hypothetical protein SELMODRAFT_147976 [Selaginella moellendorffii]
gi|300160687|gb|EFJ27304.1| hypothetical protein SELMODRAFT_147976 [Selaginella moellendorffii]
Length = 421
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 132/232 (56%), Gaps = 18/232 (7%)
Query: 77 LKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPR 136
+ D LR G +F+QM + NV PNEA T++ARL+ +K+D D AFE++K M + P+
Sbjct: 1 MMDGFLRKGLEIFEQMQAENVAPNEATFTALARLSVAKRDGDLAFEIVKAMIAA-KIPPK 59
Query: 137 LRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQYLQ 183
LR Y PAL+ + + +A+KA+ EE E+ LL +S+ ++VY L
Sbjct: 60 LRCYGPALYVYFKRNDAEKAFEVYNHMLVHGVQPEEAELEVLLHLSSKACLGDRVYLLLH 119
Query: 184 KLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGL-VKNAVLKNGGGWHGLGWIGQG 239
LR TVR V++ T +IE WF +V G S V+ + L GGGWHGLGW+GQG
Sbjct: 120 HLRETVRDVSQSTVSVIERWFKSDFAGRVTGNSLPGDFDVRCSSLAKGGGWHGLGWLGQG 179
Query: 240 KWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANF 291
W V S+ G CC C Q+ +DI +T+ FA+ +A+LA ++E +F
Sbjct: 180 IWNVGYTSLTAEGVCCRCNEQMVTIDITPEDTDVFAKCIASLAFKRESNNSF 231
>gi|296081503|emb|CBI20026.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 49/176 (27%)
Query: 133 VVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKVSAGTGRVEKVY 179
+ P+LR+Y P LF FC+ +A +AYE E E+ ALL +S + RV++VY
Sbjct: 6 IPPKLRSYGPPLFGFCKKGDADRAYEVDAHMMESGVVAEEPELCALLGLSVESRRVDRVY 65
Query: 180 QYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQG 239
+ + +LR++VR V+E T +++E WF+ + G
Sbjct: 66 EMVHRLRASVRQVSESTAEVVERWFNSEDAAG---------------------------- 97
Query: 240 KWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
+DE+G C SCG +L C+DID ETE FA S+ LA ++EVKA+F + Q
Sbjct: 98 --------MDEAGVCQSCGEKLVCIDIDPRETENFASSLTKLACQREVKADFVQFQ 145
>gi|38567837|emb|CAE05786.2| OSJNBb0020J19.15 [Oryza sativa Japonica Group]
Length = 344
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 102/177 (57%), Gaps = 18/177 (10%)
Query: 135 PRLRTYDPALFCFCENLEAQKAY-------------EEQEITALLKVSAGTGRVEKVYQY 181
P LR+Y PALF +C+ +A A EE E+ ALL+V++ GR ++VY+
Sbjct: 8 PHLRSYGPALFAYCDAGDADGATEVEAHMDASGVVPEEAELAALLRVNSARGRPDQVYRL 67
Query: 182 LQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGLVKNAVLKNGGGWHGLGWIGQ 238
L + R +R V + T +++E WF+ + D VK + GGGWHG GW+G+
Sbjct: 68 LHRARVLLRQVADATAQLLESWFASHAASEAGLDHWDATKVKQGLRNGGGGWHGQGWLGK 127
Query: 239 GKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
G+W V R +D+ G C CG +L C+DID +ET FA+SVA +A+ ++ ANF + Q
Sbjct: 128 GQWTVARTDMDKDGTCHRCGEKLVCIDIDPSETHSFAESVAQIAINRD--ANFVKFQ 182
>gi|296082798|emb|CBI21803.3| unnamed protein product [Vitis vinifera]
Length = 339
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 89/176 (50%), Gaps = 49/176 (27%)
Query: 133 VVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKVSAGTGRVEKVY 179
+ P+LR+Y P LF FC+ +A +AYE E E+ ALL +S + V++VY
Sbjct: 6 IPPKLRSYGPPLFGFCKKGDANRAYEVDAHMVESGVVAEEPELCALLGLSVESRWVDQVY 65
Query: 180 QYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQG 239
+ + +LR++VR V+E T +++E WF+ + G
Sbjct: 66 EMMHRLRASVRQVSESTAEVVERWFNSEDAAG---------------------------- 97
Query: 240 KWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKANFSESQ 295
+DE+G C SCG +L +DID ETE FA S+ LA ++EVKA+F + Q
Sbjct: 98 --------MDEAGVCQSCGEKLVGIDIDPRETENFASSLTKLACQREVKADFVQFQ 145
>gi|242060047|ref|XP_002459169.1| hypothetical protein SORBIDRAFT_03g047110 [Sorghum bicolor]
gi|241931144|gb|EES04289.1| hypothetical protein SORBIDRAFT_03g047110 [Sorghum bicolor]
Length = 414
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 51/77 (66%)
Query: 219 VKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSV 278
VK+A++ NGGG H LGW+G G W V+R V C C +LAC+DID ET RFA SV
Sbjct: 105 VKDAIVANGGGCHRLGWLGTGPWTVQRVRVGADDHCGGCRYRLACIDIDMEETRRFADSV 164
Query: 279 AALAMEQEVKANFSESQ 295
A LA+E+E K NFS Q
Sbjct: 165 AGLALERETKTNFSRFQ 181
>gi|15239331|ref|NP_200851.1| antiporter/ drug transporter [Arabidopsis thaliana]
gi|79331594|ref|NP_001032110.1| antiporter/ drug transporter [Arabidopsis thaliana]
gi|9757745|dbj|BAB08226.1| unnamed protein product [Arabidopsis thaliana]
gi|332009946|gb|AED97329.1| antiporter/ drug transporter [Arabidopsis thaliana]
gi|332009947|gb|AED97330.1| antiporter/ drug transporter [Arabidopsis thaliana]
Length = 156
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 60/77 (77%)
Query: 218 LVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQS 277
+++ AVLKNGGGWHG GW+G GKW+VK+G+V +G+C SC QLACVD ++ ET++F S
Sbjct: 1 MLREAVLKNGGGWHGHGWVGDGKWIVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDS 60
Query: 278 VAALAMEQEVKANFSES 294
+ ALAME++ K N ES
Sbjct: 61 LVALAMERKAKMNSCES 77
>gi|110738688|dbj|BAF01269.1| hypothetical protein [Arabidopsis thaliana]
Length = 135
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 60/77 (77%)
Query: 218 LVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQS 277
+++ AVLKNGGGWHG GW+G GKW+VK+G+V +G+C SC QLACVD ++ ET++F S
Sbjct: 1 MLREAVLKNGGGWHGHGWVGDGKWIVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDS 60
Query: 278 VAALAMEQEVKANFSES 294
+ ALAME++ K N ES
Sbjct: 61 LVALAMERKAKMNSCES 77
>gi|255083625|ref|XP_002508387.1| predicted protein [Micromonas sp. RCC299]
gi|226523664|gb|ACO69645.1| predicted protein [Micromonas sp. RCC299]
Length = 585
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 39/219 (17%)
Query: 13 NKKRKTN--PNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCS- 69
++KRK N P P + D A A + +++A+ L H FN LL+LCS
Sbjct: 19 DRKRKKNFAPKPGQAARREIDVACAKGDTAAAFAAFDAAVDSGEPLQPHSFNVLLHLCSG 78
Query: 70 ---------------NSATDPSLK----DSALRHGFR---VFDQMLSNNVIPNEALVTSV 107
+ AT P+ K H R +F++M+ +V E T++
Sbjct: 79 GTSTGGNYKDDAKTADGATPPAAKVVVPPKDAVHPERANAIFNKMVELDVQRTEMTYTAL 138
Query: 108 ARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE--------- 158
AR+ A+ + A +++KR+ +E + P+LRT+ PAL FC + + A E
Sbjct: 139 ARIEAASGEPRRALDVVKRLIDE-RLTPKLRTFAPALHAFCMKGDIEGALEAEAEIANAG 197
Query: 159 ----EQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVN 193
E E LL A R E L+++R VR ++
Sbjct: 198 IEISEAEYAVLLNAYADAERWEDGLALLRRMREEVRTLS 236
>gi|307108020|gb|EFN56261.1| hypothetical protein CHLNCDRAFT_145111 [Chlorella variabilis]
Length = 579
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
Query: 132 NVVPRLRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRC 191
V P+LR++ PAL + E E KA+E A ++ G ++ Q S
Sbjct: 245 GVAPKLRSFTPALIAYAEAGECAKAFEVDAAIAAHQLDLGEPEFGRLVQAAAAGASWAAA 304
Query: 192 VNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDES 251
+ + + L V G G G+W V +VD +
Sbjct: 305 LG------VLRRIGAELTTLQPASLARVAALFASPTAARAFEGVPGGGRWEVGPAAVDGA 358
Query: 252 GKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVKAN 290
G+C CG +LA +D+ E +FAQ +AA+A QE + N
Sbjct: 359 GRCSRCGGRLAALDLSGEELRQFAQGIAAIAERQERRPN 397
>gi|301120109|ref|XP_002907782.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106294|gb|EEY64346.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 505
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 113/283 (39%), Gaps = 57/283 (20%)
Query: 10 SKPNKKRKTNPNP----ETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL 65
+K ++R+ P E + I +Q C + D A+ +YE ++ + ++ ++
Sbjct: 27 TKTQRRRERKQTPAEKLEYQYRIQVQKCAQENDATRALEVYEQMKREGVNVAPYIYSVVI 86
Query: 66 YLCSNSATDPSLKDSALRHG-FRVFDQMLSNNV--------IPNEALVTSVARLAASKKD 116
+CS A DP +A ++G + V+ M + +E + +++ +L + +D
Sbjct: 87 NVCSK-ADDP----AAFKNGAYNVYQDMKQASAASKQKKKSDSSEPMYSAMIKLCSKAQD 141
Query: 117 SDYAFELIKRMNNEFNVVPRLRTYDPALFCF--------CENLEAQKAYEEQEIT----- 163
D +I M V P+LRT+ P L C + + E E+T
Sbjct: 142 FDTCEIIITEMEVA-KVDPKLRTFSPLLQALSDAGNLDKCIGVHEKLLSHELELTEDDYV 200
Query: 164 ALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAV 223
ALL+ S G E+ Y +L + + T ++++WF+ + A
Sbjct: 201 ALLRASVKAGSGERFYAFLDSFIDEIWQPSLSTWDVLKEWFNSE--------------AA 246
Query: 224 LKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDI 266
NG W + GSV G C G+QL V++
Sbjct: 247 RMNGRTWK-----------ITEGSVSREGVCFVTGDQLQSVEL 278
>gi|147858758|emb|CAN83101.1| hypothetical protein VITISV_007460 [Vitis vinifera]
Length = 435
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 77 LKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPR 136
K ALR GF+ V NEA +TS+ R+A S + D AF+++K+ + PR
Sbjct: 264 FKKYALRSGFQ--------EVPMNEATLTSLVRMAMSMGNGDMAFDMVKQ-TKPLGINPR 314
Query: 137 LRTYDPALFCFCENLEAQKAYEEQE 161
LR+Y LF FC N + +KA+ +E
Sbjct: 315 LRSYGSELFTFCNNGDIEKAFGVEE 339
>gi|348689807|gb|EGZ29621.1| hypothetical protein PHYSODRAFT_252680 [Phytophthora sojae]
Length = 512
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 109/291 (37%), Gaps = 61/291 (20%)
Query: 23 ETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSAL 82
E + I +Q+C D A A+ +YE S ++ + +N ++ +CS + K A
Sbjct: 41 EYQYRIQVQNCAHDNDAARALQVYEQMKSEGVNVAPYIYNVVINVCSRMEDLAAFKSGA- 99
Query: 83 RHGFRVFDQM-----------------LSNNVIPNEALVTSVARLAASKKDSDYAFELIK 125
+ V+ M +P E + +++ ++ + +D + LI
Sbjct: 100 ---YAVYQDMKEACDNAKQQQQKGKKKHQQQQVP-EPIYSAMVKICSKAQDFEACETLIA 155
Query: 126 RMNNEFNVVPRLRTYDPAL-------------FCFCENLEAQKAYEEQEITALLKVSAGT 172
M E V P+LRT+ P L + + L+ + E + ALL+
Sbjct: 156 EM-EEAKVEPKLRTFGPLLQAHSDAGHLDKCIWVHDKFLKNELEPTEADYVALLRACVKA 214
Query: 173 GRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHG 232
G ++ Y +L + V + T ++++WFS +
Sbjct: 215 GDAQRFYAFLDRFIDDVWQPSLTTWDVLKEWFSSEAAQ---------------------- 252
Query: 233 LGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVAALAM 283
+ KW + G+V + G C G+QL +++ T V A+ +
Sbjct: 253 ---VDGRKWKITEGTVSKEGVCSVTGDQLQSLELSPELTSELLAKVIAVVV 300
>gi|325183720|emb|CCA18179.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 481
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 124/315 (39%), Gaps = 53/315 (16%)
Query: 1 MSNTTSANPSKPNKKRKTNPNPETNFLIS-----LQSCTKSKDLATAISLYESALSLNFR 55
+S +SA+ K R+ + LI+ ++ C KS D A+S + N
Sbjct: 16 VSEHSSASNYGKKKARRLRRQTDEEKLIAESRRGIELCVKSGDAIGALSTLQRLKDQNLE 75
Query: 56 LSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQM--LSNNVIPNEALVTSVARLAAS 113
+ + + L CS S +L D F++F++M ++N + +E +T++ R+
Sbjct: 76 VPPYLYRVTLNACSQSLKVDTLVDQT----FKLFEEMESITNQKLIDENTLTAMIRICVQ 131
Query: 114 KKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-------------EQ 160
K D L +M N +++ P+LRT+ L + +KA E E
Sbjct: 132 SKQLDRCALLFDKMRN-YDIKPKLRTFSSLLSAYAAAGTLEKALEMKSMIEQNGIKMTES 190
Query: 161 EITALLK-VSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLV 219
E ALL SA + RV L + + + T I+ W++ G C
Sbjct: 191 EYIALLDGCSAESDRV-LFRTMLDEFAQNIMVPSRSTWDNIKHWYT----RGAIC----- 240
Query: 220 KNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGNQLACVDIDDAETERFAQSVA 279
+ KW + +VD +G C N+L +D+ E + +
Sbjct: 241 ----------------VDGEKWDCQVINVDANGCCPLTKNRLKSIDLTLEEKQELLDKIE 284
Query: 280 AL-AMEQEVKANFSE 293
AL ME+E A + E
Sbjct: 285 ALIGMEEEKLAQWKE 299
>gi|412992232|emb|CCO19945.1| predicted protein [Bathycoccus prasinos]
Length = 557
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 58/253 (22%)
Query: 13 NKKRKTNPNPET---------NFLISLQSCTKSKDLAT------AISLY-ESALSLNFRL 56
NK+ K N P+T N ++ Q+ K D A+ A + Y ES + L
Sbjct: 4 NKRHKPNDTPDTPDGVNGGVINRQLTFQTRKKIDDAASRNDRRLAFTTYDESKNNPAIAL 63
Query: 57 SLHHFNALLYLCS-NSATDP-SLKDSALRHGFRVFDQMLSNN----------VIPNEALV 104
+H N LL+LCS N D S K+ +F +++ ++ E
Sbjct: 64 PMHTLNVLLHLCSANDENDSFSTKEEDKERAEEIFFRLMKDSEEEEDKHQQGRRKTEMSY 123
Query: 105 TSVARLAASKKDSDYAFELIKRMNN---------------EFNVVPRLRTYDPALFCFCE 149
T++AR+ A + + +FE++ N + + P+LRTY P+L FCE
Sbjct: 124 TAMARVYARNGEFEKSFEMVDLCKNGGALGKGKDGGGKKTQQKLTPKLRTYAPSLRGFCE 183
Query: 150 N---LEAQKAYE----------EQEITALLKVSAGTGRV--EKVYQYLQKLRSTVRCVNE 194
+ A+ +E E E TA++ V + E ++ L+K++S VR +
Sbjct: 184 SGNWKRAEDVFEAIEREGLECTEMEFTAMMSVYGREKKTCEENGFRMLRKMKSKVRTCGK 243
Query: 195 ETGKIIEDWFSGQ 207
E + +E +F +
Sbjct: 244 ELIESVERFFKAE 256
>gi|428168076|gb|EKX37025.1| hypothetical protein GUITHDRAFT_145271 [Guillardia theta CCMP2712]
Length = 574
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 104/269 (38%), Gaps = 52/269 (19%)
Query: 26 FLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRHG 85
++ ++ + + ++L LSL + F+ +LYL PS + ++
Sbjct: 13 YVSKIRQAVREGKVEDGLALLREMLSLGHQPPSFVFSHVLYLLETQG--PS-RFGDVQEL 69
Query: 86 FRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALF 145
+V M NV P EA T++ R + + A E++ M N +P+ RT+ P L
Sbjct: 70 MKV---MKEQNVQPEEAFFTTLIRFHLAMGNPSSAREVLGEMMKAENTLPKRRTFLPVLE 126
Query: 146 CFCENLEAQKAYE-------------EQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCV 192
CE ++A++ E E L+K+ + ++ + L+++R + +
Sbjct: 127 AVCEGGNEEEAFKMLTLMRELGIVMGESEFIYLVKLCSFDYARHRMPEVLEEMRQVLYGI 186
Query: 193 NEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESG 252
+ + + +WF +K + VS G + E G
Sbjct: 187 QQPLAEELRNWF--EKTHNVST-------------------------------GRITEFG 213
Query: 253 KCCSCGNQLACVDIDDAETERFAQSVAAL 281
C C +L VD+ + + R + + +
Sbjct: 214 MCSVCQARLGIVDVKEEQVARMCEDLEKM 242
>gi|302832000|ref|XP_002947565.1| hypothetical protein VOLCADRAFT_120484 [Volvox carteri f.
nagariensis]
gi|300267429|gb|EFJ51613.1| hypothetical protein VOLCADRAFT_120484 [Volvox carteri f.
nagariensis]
Length = 396
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 92 MLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENL 151
M S + P++ ++AR A + A +L + + + +LR + PA +C +
Sbjct: 1 MKSAGMKPDQGTYLALARREALLGNPQAALQLTQECIQDGKLA-QLRMFHPAQVGYCLSG 59
Query: 152 EAQKAYE-------------EQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGK 198
+ + + E E LL+ A G E++ L +++S + ++ ET
Sbjct: 60 DVAQLHHIDSIIASHRLDNTEYEFARLLEGIAAAGTYEQMKAVLVRMQSDMNQMSPETAG 119
Query: 199 IIEDWFSGQKVNGVSCDL-------GLVKNAVLKNGGGWHGLGWIGQGKW-VVKRGSVDE 250
I +F + GLV++ + + GG G G+ +W VV+ V E
Sbjct: 120 HITSFFEKNAAAQQAFAPADQGGCRGLVRH--ITDAGGDSG----GEWRWRVVQNAEVAE 173
Query: 251 SGKCCSCGNQLACVDIDDAETERFAQSVAALA 282
G+C + G + +D++D E + FA+++A LA
Sbjct: 174 DGRCEAAGGTVKVIDLEDEEWDAFAKAIAELA 205
>gi|384253474|gb|EIE26949.1| hypothetical protein COCSUDRAFT_59444 [Coccomyxa subellipsoidea
C-169]
Length = 581
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 38/220 (17%)
Query: 83 RHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDP 142
R G ++ + +E T++AR+AA++ D A + R + +LR++ P
Sbjct: 193 RRGKELWQTLKERGGGKSEVCYTALARMAATEGKPDQALD-AAREALATGLHLKLRSFVP 251
Query: 143 ALFCFCENLEAQKAYEEQEITA-------------LLKVSAGTGRVEKVYQYLQKLRSTV 189
AL +C A++ E+ A L+ V A + L ++ +
Sbjct: 252 ALKAYCAAGNVDAAFKVDELIAEQELDLTEDEYALLIGVCAYGAVWARAEGVLTRIAREL 311
Query: 190 RCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGK-WVVKRGSV 248
+ E T +E +F +G+G+ WV++R SV
Sbjct: 312 TALQEGTLAAVERFFRSPSAAQS-----------------------LGEGQSWVLERCSV 348
Query: 249 DESGKCCSCGNQLACVDIDDAETERFAQSVAALAMEQEVK 288
ESG+ C QL VD+ E FA+ +AALA ++E +
Sbjct: 349 SESGQPSCCDGQLEAVDLSPEEYHAFAEGIAALARQKEKR 388
>gi|299470328|emb|CBN78378.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 723
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 23/150 (15%)
Query: 9 PSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLC 68
P P K++K F + + K+ D A+ LY A + +S FNA+L
Sbjct: 26 PQSPRKRQKA-------FSTMVVNSVKAGDADRALLLYGKAAEVGCMISETVFNAVL--- 75
Query: 69 SNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMN 128
++ +G RV M+ + P E + R AAS+ + AF ++ M
Sbjct: 76 ------------SVSNGVRVLSDMVEAGIKPRENHYAFLLREAASRGAFEEAFSQVREMV 123
Query: 129 NEFNVVPRLRTYDPALFCFCENLEAQKAYE 158
+ V PRLRTY P L C + A E
Sbjct: 124 D-GGVRPRLRTYSPLLKGLCHKPDMTLASE 152
>gi|303287330|ref|XP_003062954.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455590|gb|EEH52893.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 726
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 88 VFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCF 147
VFD M ++ E T++AR+ A+ D++ AFEL + +E + P+LRT+ PAL F
Sbjct: 212 VFDHMAKKDIPRTEMSYTALARVRAACGDAEGAFELANTVESEPRLAPKLRTFAPALHAF 271
Query: 148 C 148
Sbjct: 272 A 272
>gi|308799561|ref|XP_003074561.1| unnamed protein product [Ostreococcus tauri]
gi|116000732|emb|CAL50412.1| unnamed protein product [Ostreococcus tauri]
Length = 506
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 111/308 (36%), Gaps = 60/308 (19%)
Query: 13 NKKRKTNP-NPETNFLISLQSCTKSKDLATAISLYESALSL--NFRLSLHHFNALLYLC- 68
KKR +P P ++ + + + A +E A + L+ H N LL++C
Sbjct: 39 GKKRGGDPFGPAAVARRAIDAACQRDEFDAAWKTFEEAREKEGTYTLAPHSCNVLLHMCA 98
Query: 69 --SNSATDPSLKDSALR--HGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELI 124
S + T +R + M + + NE T++AR+ A+ D D A E
Sbjct: 99 GGSGAWTSGMASAECVRGDKAVEITSYMEKHGIAMNEMSYTALARVRAASGDVDGALEAA 158
Query: 125 KRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-------------EQEITALLKVSAG 171
+ E + P++RTY AL + +K E E +LK
Sbjct: 159 A-LCKEKKLTPKVRTYACALHACARGGDLRKMERVDAIMRGHGLLPTELEFMEMLKAYRI 217
Query: 172 TGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWH 231
+ + L+K+R+ +RC ++E + + WF
Sbjct: 218 AEEFDAGFDMLRKMRTEIRCPSDEMCEELRVWFGAAP----------------------- 254
Query: 232 GLGWIGQGKWVVKRGSVDESGKCCSC--------GNQLACVDIDDAETERFAQSVAALAM 283
GW V SVDE+G + QL + + + E E +A LA
Sbjct: 255 --GWC-----VADEVSVDEAGTAVAVLVMDEKRIQIQLKAISLTEDERENLLSGIAKLAC 307
Query: 284 EQEVKANF 291
E+E + F
Sbjct: 308 EREAISEF 315
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 13/155 (8%)
Query: 14 KKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT 73
+ R PN T+ +I + + KS +L A+ LY +S +F + + L+
Sbjct: 858 RSRGCEPNAITHNII-ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLI-------- 908
Query: 74 DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNV 133
D LK ++F++ML PN + + + D+A EL K+M E +
Sbjct: 909 DGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKE-GI 967
Query: 134 VPRLRTYDPALFCFCENL---EAQKAYEEQEITAL 165
P L++Y + C C EA + +EE ++T L
Sbjct: 968 RPDLKSYTILVECLCITGRIDEAVQYFEELKLTGL 1002
>gi|389602584|ref|XP_001567493.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505509|emb|CAM42931.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 801
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 98/254 (38%), Gaps = 46/254 (18%)
Query: 22 PETNFLISLQS-CTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDS 80
PET +L C +D+A A L E LN ++ +N L+ + SA
Sbjct: 167 PETAVYNTLLGYCAAVRDVAQATFLVEEMKQLNVPRDVNTYNCLMSVMVESA-------- 218
Query: 81 ALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTY 140
+VF ++LS N+ P+ ++ + A+ D D AF+L++ M + ++P + TY
Sbjct: 219 PYAETLKVFQELLSLNLRPSNRSYNTILKAASRHSDYDRAFQLVEEMKKK-GLIPDMETY 277
Query: 141 DPALFCFCEN----------LEAQKAYEEQ----------EITALLKVSAGTGRVEKVYQ 180
+ L CE A+++ EQ + LL+ Y
Sbjct: 278 N-YLISVCEQRIDYVRGTSVYSAKRSTREQILQGSHAIAELVMTLLREMRSMQVCPDTYT 336
Query: 181 YLQKLRSTVRCVNEETGKIIEDWF-SGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQG 239
Y + L +RC +E + D ++ S +G G GLG
Sbjct: 337 YNKALSILLRCEDERVFVVYNDMVRHANEIVDHSSSVGRA------TSGSSRGLG----- 385
Query: 240 KWVVKRGSVDESGK 253
+ RGSV+E +
Sbjct: 386 ---IARGSVNEPNR 396
>gi|428179078|gb|EKX47950.1| hypothetical protein GUITHDRAFT_136922 [Guillardia theta CCMP2712]
Length = 714
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 15 KRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATD 74
+++ P+P T F L C SK A+ + E +L++ ++A++++C +
Sbjct: 404 RKEIPPDPMT-FSALLSVCQHSKQWEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGR- 461
Query: 75 PSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVV 134
L FR+ D+ + + PN + T++ +D D AF +++ M + +V
Sbjct: 462 -------LDDAFRILDECKRDGIKPNVIMFTALIHACKVARDLDRAFRVLELMKED-HVT 513
Query: 135 PRLRTYDPALFCFCE 149
P L T++ L CE
Sbjct: 514 PNLVTFN-VLLGTCE 527
>gi|440789636|gb|ELR10941.1| pentatricopeptide repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 610
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 17/145 (11%)
Query: 1 MSNTTSANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYES-ALSLNFRLSLH 59
++ SA + P R + P+ L + +++ A+ L + L N R+
Sbjct: 148 LNGLMSALSTLPGAGRNSPVKPDVRVYGKLIASRQTEQAFAALDLMRAHGLHPNLRV--- 204
Query: 60 HFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDY 119
ALL +C+ + +P VFDQ+ +++ P+ + L A +D
Sbjct: 205 -ITALLPVCTMATVEP------------VFDQIRRHDLRPDRVFLVGTLELYARSHATDK 251
Query: 120 AFELIKRMNNEFNVVPRLRTYDPAL 144
EL++ M EF V P + ++ AL
Sbjct: 252 LLELLRVMEPEFKVAPDVHIFNVAL 276
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 35/166 (21%)
Query: 23 ETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLY-LCSNSATDPSLKDSA 81
+ ++ +Q+C D ++ ++LY+ ++ H F+ ++ LC K+
Sbjct: 292 KITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLC---------KEGK 342
Query: 82 LRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNE-FNVVPRLRTY 140
L G+ VF+ M+ PN A+ T + A + A L+ RM +E FN P + TY
Sbjct: 343 LNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFN--PDVVTY 400
Query: 141 DPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQYLQKLR 186
+ C+N GRVE+ Y Q R
Sbjct: 401 SVVVNGLCKN----------------------GRVEEAMDYFQTCR 424
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Query: 20 PNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKD 79
P ET I L K + A+ +++ + R + +N+LL S A +++
Sbjct: 409 PTIETYTSI-LDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLL---SGLAKARQMEN 464
Query: 80 SALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRT 139
+ L + D+ML+N V+PNE T++ A D + AF + +RM E N+ +
Sbjct: 465 ARL-----MLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKE-NLAIDIVA 518
Query: 140 YDPALFCFCENLEAQKAYEE-QEIT 163
Y L C++ Q+A E Q+IT
Sbjct: 519 YGALLKACCKSGAMQRAVEVFQQIT 543
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 67/169 (39%), Gaps = 32/169 (18%)
Query: 20 PNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKD 79
PN T+ +I + + KS L A+ L+ +S +F + + LL D LK
Sbjct: 858 PNTITHNII-IANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLL--------DGLLKS 908
Query: 80 SALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRT 139
L +F++M+ PN A+ + D + A EL KRM E + P L++
Sbjct: 909 GRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVRE-GIRPDLKS 967
Query: 140 YDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQYLQKLRST 188
Y + C CE GRV+ Y +KL+ T
Sbjct: 968 YTSLVGCLCE----------------------AGRVDDALHYFEKLKQT 994
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 32/173 (18%)
Query: 16 RKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDP 75
R+ P+ T + I + S KS +L A+ + +S +FR + + L+ D
Sbjct: 852 RRCKPDAIT-YNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI--------DG 902
Query: 76 SLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVP 135
K L R+F++M PN A+ + D++ A +L KRM NE + P
Sbjct: 903 LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE-GIRP 961
Query: 136 RLRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQYLQKLRST 188
L++Y + C C GRV++ Y +L+ST
Sbjct: 962 DLKSYTILVDCLCL----------------------AGRVDEALYYFNELKST 992
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 11/137 (8%)
Query: 23 ETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLY-LCSNSATDPSLKDSA 81
+ ++ +Q+C D + ++LY+ ++ H F+ ++ LC K+
Sbjct: 274 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC---------KEGK 324
Query: 82 LRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYD 141
L G+ VF+ M+ PN A+ T + A + A L+ RM +E P + TY
Sbjct: 325 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYS 383
Query: 142 PALFCFCENLEAQKAYE 158
+ C+N ++A +
Sbjct: 384 VVVNGLCKNGRVEEALD 400
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 32/173 (18%)
Query: 16 RKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDP 75
R+ P+ T + I + S KS +L A+ + +S +FR + + L+ D
Sbjct: 852 RRCKPDAIT-YNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI--------DG 902
Query: 76 SLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVP 135
K L R+F++M PN A+ + D++ A +L KRM NE + P
Sbjct: 903 LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE-GIRP 961
Query: 136 RLRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQYLQKLRST 188
L++Y + C C GRV++ Y +L+ST
Sbjct: 962 DLKSYTILVDCLCL----------------------AGRVDEALYYFNELKST 992
>gi|242079531|ref|XP_002444534.1| hypothetical protein SORBIDRAFT_07g023400 [Sorghum bicolor]
gi|241940884|gb|EES14029.1| hypothetical protein SORBIDRAFT_07g023400 [Sorghum bicolor]
Length = 121
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 158 EEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCD 215
EE E+ LL+V+A G+ ++VY+ L + R+ +R V T +++E WF + V D
Sbjct: 9 EEPELAVLLRVNADKGKADEVYRLLHRTRALIRQVCGTTAQVVEAWFWSDATSQVGVD 66
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 11/137 (8%)
Query: 23 ETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLY-LCSNSATDPSLKDSA 81
+ ++ +Q+C D + ++LY+ ++ H F+ ++ LC K+
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC---------KEGK 342
Query: 82 LRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYD 141
L G+ VF+ M+ PN A+ T + A + A L+ RM +E P + TY
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYS 401
Query: 142 PALFCFCENLEAQKAYE 158
+ C+N ++A +
Sbjct: 402 VVVNGLCKNGRVEEALD 418
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML +IPN T++ D A E+ KRM ++ +++P L
Sbjct: 206 KESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQ-SLLPDL 264
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+N + ++A++
Sbjct: 265 ITYNTLIYGLCKNGDLKQAHD 285
>gi|389613445|dbj|BAM20071.1| similar to CG4611, partial [Papilio xuthus]
Length = 235
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 24 TNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALR 83
TN+ + +++ + DL A + + +S ++ +H FN LL+ C N K+ LR
Sbjct: 22 TNYNVMIKAFGRCGDLPMAFKIVDEMISKKIKIRVHTFNHLLHACIND------KEHGLR 75
Query: 84 HGFRVFDQMLSNNVIPN 100
H V+ +MLS PN
Sbjct: 76 HALLVWRKMLSMREKPN 92
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 13/153 (8%)
Query: 16 RKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDP 75
R PN T+ ++ + KS L AI LY +S +F + + L+ D
Sbjct: 852 RGCKPNTITHNIV-IFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLI--------DG 902
Query: 76 SLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVP 135
LK L + F++ML +PN L + + D + A EL +RM E + P
Sbjct: 903 LLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKE-GIRP 961
Query: 136 RLRTYDPALFCFC---ENLEAQKAYEEQEITAL 165
L++Y + C C + +A +EE +++ L
Sbjct: 962 DLKSYSIMVDCLCMVGKVDDALHYFEELKLSGL 994
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML +IPN T++ D+A E+ KRM ++ +++P L
Sbjct: 221 KESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQ-SLLPDL 279
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ + ++A++
Sbjct: 280 ITYNTLIYGLCKKGDLKQAHD 300
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S L +FD+ML N ++PN T++ D A E+ K+M ++ ++ P L
Sbjct: 218 KESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQ-SLSPDL 276
Query: 138 RTYDPALFCFCEN---LEAQKAYEEQEI----------TALLKVSAGTGRVEKVYQYLQK 184
TY+ ++ C+N +AQ E + T L+ S G +E ++Y ++
Sbjct: 277 ITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKR 336
Query: 185 L 185
+
Sbjct: 337 M 337
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 11/145 (7%)
Query: 20 PNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKD 79
P ET I L K ++ A+ +++ + R + +N+LL S A +++
Sbjct: 295 PTIETYTSI-LDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLL---SGLAKARQMEN 350
Query: 80 SALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRT 139
+ L + ++ML+N V+PNE T++ A D + AF + +RM E N+ +
Sbjct: 351 ARL-----MLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKE-NLAIDIVA 404
Query: 140 YDPALFCFCENLEAQKAYEE-QEIT 163
Y L C++ Q+A E Q+IT
Sbjct: 405 YGALLKACCKSGAMQRAAEVFQQIT 429
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 55 RLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASK 114
R SL +NA++ +C+N FR+F+ M+ + V+P+ + ++ A K
Sbjct: 304 RKSLITWNAMMMVCANHGYAED--------AFRLFEGMIGSGVVPDGVTILALLVAYAHK 355
Query: 115 KDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAY 157
D L + M ++ V PR+ Y + + Q+AY
Sbjct: 356 GFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAY 398
>gi|219110673|ref|XP_002177088.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411623|gb|EEC51551.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 637
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 81/216 (37%), Gaps = 40/216 (18%)
Query: 29 SLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLC-------------------- 68
++Q C K DL TA+ +YE A++ ++ F LL LC
Sbjct: 75 TVQQCCKIDDLMTAMEVYEQAVADGIKMEAQSFYNLLNLCDGLGDRSIHIGTPKQSIELA 134
Query: 69 ---SNSATDPSLK----DSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAF 121
SN L+ D + FR+ + M + E T++ +L + + A
Sbjct: 135 CNESNEEILDRLRPVDIDDRRKFAFRIKEHMDGLGLPLIETAYTALIKLLSKSRQLGKAE 194
Query: 122 ELIKRMNNEFNVVPRLRTYDPALFCFCEN---LEAQKAYE----------EQEITALLKV 168
L+ P+LR + P L +CE + A + ++ E+E AL++
Sbjct: 195 VLLDEAEGVQQCRPKLRMFAPLLSAYCETGSMIPALRVWQRLHRHGLVLSEKEYVALIRC 254
Query: 169 SAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWF 204
+ T + + L L V + ET I WF
Sbjct: 255 AVITKDACVMDRVLSDLAEDVLVPSRETCLAIRAWF 290
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 28 ISLQSCTKSKDLATAISLYESALSLNF---RLSLHHFNALLYLCSNSATDPSL-----KD 79
IS+Q D T SL+++ +LN LSLH + L +S SL K
Sbjct: 38 ISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKF 97
Query: 80 SALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRM 127
+ G +VFD ML NV+P ++ S +R + D D AF + K+M
Sbjct: 98 GCIHLGRKVFDTMLKRNVVPWTTIIGSYSR----EGDIDIAFSMFKQM 141
>gi|389578489|ref|ZP_10168516.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA
[Desulfobacter postgatei 2ac9]
gi|389400124|gb|EIM62346.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA
[Desulfobacter postgatei 2ac9]
Length = 445
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 153 AQKAYEEQEITALLKVSAGTGRVEK-VYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNG 211
Q + ++ T++ VS GTGRVEK VY + ++L V E + D + + G
Sbjct: 56 GQSLFTDKRDTSIQYVSPGTGRVEKVVYGHRRRLMEVVIATEPEDEYVEYDPVTLAGIVG 115
Query: 212 VSCDLGLVKNAVLKNGGGWHGL 233
+ D LV N LKNGG W GL
Sbjct: 116 MPRD-ALVTN--LKNGGLWQGL 134
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 28 ISLQSCTKSKDLATAISLYESALSLNF---RLSLHHFNALLYLCSNSATDPSL-----KD 79
IS+Q D T SL+++ +LN LSLH + L +S SL K
Sbjct: 38 ISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKF 97
Query: 80 SALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRM 127
+ G +VFD ML NV+P ++ S +R + D D AF + K+M
Sbjct: 98 GCIHLGRKVFDTMLKRNVVPWTTIIGSYSR----EGDIDIAFSMFKQM 141
>gi|146096442|ref|XP_001467807.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134072173|emb|CAM70874.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 801
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 22 PETNFLISLQS-CTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDS 80
PET +L C +D+A A L E LN + ++ +N L+ + SA
Sbjct: 167 PETAVYNTLLGYCAAVRDVAQATFLIEEMKQLNVQRDVNTYNCLMSVMMESA-------- 218
Query: 81 ALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTY 140
RVF ++L N+ P ++ + A D D AF+ ++ M + ++P + TY
Sbjct: 219 PYEETLRVFQELLYLNLKPTIRSYNTILKAACRHGDYDRAFQFVEEMKKK-GLIPNVETY 277
Query: 141 DPALFCFCEN 150
+ L CE
Sbjct: 278 N-YLITVCEQ 286
>gi|302768873|ref|XP_002967856.1| hypothetical protein SELMODRAFT_169254 [Selaginella moellendorffii]
gi|300164594|gb|EFJ31203.1| hypothetical protein SELMODRAFT_169254 [Selaginella moellendorffii]
Length = 731
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 30 LQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVF 89
+ C ++ +LA A +Y LS + FN+L+ C S A++ F VF
Sbjct: 158 IDGCARTGELAKAFGIYRIMLSKKIKPDRVIFNSLINACGRSG--------AVKRAFEVF 209
Query: 90 DQMLSNNVI-PNEALVTSVARLAASKKDSDYAFELIKRM 127
++ S N I PN + S+ + D D A+E+ M
Sbjct: 210 TELKSENPINPNHVTMCSLIDACSKAGDGDSAYEVYTMM 248
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 38/185 (20%)
Query: 16 RKTNP-NPETNFLISL-QSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT 73
+ NP NP + SL +C+K+ D +A +Y + A ++ CS+S
Sbjct: 213 KSENPINPNHVTMCSLIDACSKAGDGDSAYEVYTMMRKRGIGGCPEPYTAAVHACSSSGN 272
Query: 74 DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNV 133
L F ++D M + V P+E +++ +A D AF++++ + ++++
Sbjct: 273 --------LERAFSIYDDMKKDGVKPDEIFFSALIDVAGHASKIDCAFDVLQEV-EKYSL 323
Query: 134 VPRLRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEK---VYQYLQK--LRST 188
VP P +F ++L+ V + TG EK +Y+ +Q +R +
Sbjct: 324 VP-----GPVIF-----------------SSLMGVCSNTGNWEKAIFLYENIQAVGIRPS 361
Query: 189 VRCVN 193
V +N
Sbjct: 362 VSTLN 366
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN T++ K D A E+ KRM ++ +++P L
Sbjct: 224 KESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQ-SLLPDL 282
Query: 138 RTYDPALFCFCENLEAQKA 156
TY+ ++ C+ + ++A
Sbjct: 283 ITYNTLIYGLCKKGDLKQA 301
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 41/200 (20%)
Query: 26 FLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL--YL--------------CS 69
F I + S K ++ A S++++ R S+ FN L+ Y+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 70 NSATDPSL-----------KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSD 118
S P + K+S + +FD+ML+N ++PN T++ D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 119 YAFELIKRMNNEFNVVPRLRTYDPALFCFCEN---LEAQKAYEEQEI----------TAL 165
A E+ K+M ++ ++ P L TY+ ++ C+ +AQ +E + T L
Sbjct: 259 LAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTL 317
Query: 166 LKVSAGTGRVEKVYQYLQKL 185
+ S G +E ++Y +++
Sbjct: 318 IDGSCKEGHLETAFEYRKRM 337
>gi|414590862|tpg|DAA41433.1| TPA: hypothetical protein ZEAMMB73_769800 [Zea mays]
Length = 1295
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 10/119 (8%)
Query: 23 ETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLY-LCSNSATDPSLKDSA 81
+ N+ I L C + DL L+ + N ++++ +L+Y LC +
Sbjct: 1042 QINYSIILHGCCQHLDLKAISDLWFDMIHHNIAPDVYNYTSLIYALC---------RHRN 1092
Query: 82 LRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTY 140
L+ VF+ ML N + PN T + + + AF + RM+ +VP L Y
Sbjct: 1093 LQDALGVFELMLENGLSPNIVTCTILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMY 1151
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML +IPN T++ D A E+ KRM ++ +++P L
Sbjct: 210 KESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQ-SLLPDL 268
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ + ++A++
Sbjct: 269 ITYNTLIYGLCKKGDLKQAHD 289
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML N ++PN T++ D A E+ K+M ++ ++ P L
Sbjct: 218 KESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDL 276
Query: 138 RTYDPALFCFCEN---LEAQKAYEEQEI----------TALLKVSAGTGRVEKVYQYLQK 184
TY+ ++ C+ +AQ +E + T L+ S G +E ++Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKR 336
Query: 185 L 185
+
Sbjct: 337 M 337
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML N ++PN T++ D A E+ K+M ++ ++ P L
Sbjct: 218 KESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDL 276
Query: 138 RTYDPALFCFCEN---LEAQKAYEEQEI----------TALLKVSAGTGRVEKVYQYLQK 184
TY+ ++ C+ +AQ +E + T L+ S G +E ++Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKR 336
Query: 185 L 185
+
Sbjct: 337 M 337
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 85 GFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPAL 144
FR+FD+ML N++PNE + + ++ AFEL+ +M + +VP TY P +
Sbjct: 525 AFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQK-GLVPDTYTYRPLI 583
Query: 145 FCFC 148
C
Sbjct: 584 SSLC 587
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML N ++PN T++ D A E+ ++M ++ +++P L
Sbjct: 218 KESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ-SLLPDL 276
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ + ++A++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAHD 297
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 63/156 (40%), Gaps = 27/156 (17%)
Query: 87 RVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNN--------EFNV----- 133
R+ M++ P+ + S+ D YA++L+K+M + +N+
Sbjct: 355 RILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGI 414
Query: 134 -----VPRLRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQYLQKLRST 188
+P L + A + E L+A + ++ L + G G+ EK Y ++++ S
Sbjct: 415 CGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSK 474
Query: 189 VRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVL 224
I D + KV G+ C+ V NA L
Sbjct: 475 ---------GFIPDTSTYSKVIGLLCNASKVDNAFL 501
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 63/156 (40%), Gaps = 27/156 (17%)
Query: 87 RVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNN--------EFNV----- 133
R+ M++ P+ + S+ D YA++L+K+M + +N+
Sbjct: 355 RILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGI 414
Query: 134 -----VPRLRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQYLQKLRST 188
+P L + A + E L+A + ++ L + G G+ EK Y ++++ S
Sbjct: 415 CGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSK 474
Query: 189 VRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVL 224
I D + KV G+ C+ V NA L
Sbjct: 475 ---------GFIPDTSTYSKVIGLLCNASKVDNAFL 501
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 35 KSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLS 94
K+ +LA A+ L E L +L++ + ALL D ++ ++ VF ML+
Sbjct: 208 KAGNLAEALKLVEEILQAGIKLNVVTYTALL--------DGLCEEGRMKEAEEVFRAMLN 259
Query: 95 NNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFC 148
V PN+ T++ K+ +YA +++K M E + P L Y L+ C
Sbjct: 260 AGVAPNQETYTALVHGFIKAKEMEYAKDILKEM-KEKCIKPDLLLYGTILWGLC 312
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 27/160 (16%)
Query: 14 KKRKTNPNPETN-FLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL------- 65
K +K P+ N F L++ + K + A ++Y S L NFR +L FN LL
Sbjct: 155 KFKKIVPDYGVNCFNALLRTLCQEKSMTDARNVYHS-LKHNFRPNLQTFNILLSGWKNVE 213
Query: 66 -----------------YLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVA 108
+ NS D K + ++VFD+M ++ P+ TSV
Sbjct: 214 DAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVI 273
Query: 109 RLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFC 148
D A +++K M E+ V P + Y+ A+ +C
Sbjct: 274 GGLGLVGQPDKARDVLKEM-KEYGVYPDVPAYNAAIRNYC 312
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 63/156 (40%), Gaps = 27/156 (17%)
Query: 87 RVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNN--------EFNV----- 133
R+ M++ P+ + S+ D YA++L+K+M + +N+
Sbjct: 355 RILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGI 414
Query: 134 -----VPRLRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQYLQKLRST 188
+P L + A + E L+A + ++ L + G G+ EK Y ++++ S
Sbjct: 415 CGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSK 474
Query: 189 VRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVL 224
I D + KV G+ C+ V NA L
Sbjct: 475 ---------GFIPDTSTYSKVIGLLCNASKVDNAFL 501
>gi|302801247|ref|XP_002982380.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
gi|300149972|gb|EFJ16625.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
Length = 730
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 14 KKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT 73
++ PN E + +L +C+ +KDLA ++++ LS + R S+ ALL + +
Sbjct: 92 QRMDVEPN-EMVIVSTLAACSGAKDLALGMAIHARILSPDLRKSVFVGTALLNMYA---- 146
Query: 74 DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRM 127
K A+ VFDQM +V+ A++T+ A++ D A E ++ M
Sbjct: 147 ----KCGAIEQARAVFDQMPHKDVVSWTAMITAFAQMG----DCRQALETLEGM 192
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 15/151 (9%)
Query: 70 NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNN 129
NS P K +VFD+ML + P + R+ + ++ FEL+ +M
Sbjct: 337 NSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEE---VFELLAKMRK 393
Query: 130 E------------FNVVPRLRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEK 177
+ R R +D L + E E + ++ G++E+
Sbjct: 394 MGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEE 453
Query: 178 VYQYLQKLRSTVRCVNEETGKIIEDWFSGQK 208
Y Y ++++ NE +I+ WFSG++
Sbjct: 454 AYGYYKEMKDKGMRPNENVEDMIQSWFSGKQ 484
>gi|168024390|ref|XP_001764719.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684013|gb|EDQ70418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1020
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 20/158 (12%)
Query: 5 TSANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNAL 64
+ A P KP+ + + +C K ++ A+ +Y+S + + L + A
Sbjct: 439 SEATPVKPD---------HVTYGALISACAKGGEVGRALEVYQSMRENDVKGFLACYTAA 489
Query: 65 LYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELI 124
++ CS L + ++D +L + V P+E +++ A D D AF ++
Sbjct: 490 VHACSQKGD--------LDYALAIYDDLLKDGVKPDEVFFSALVDAAGHSGDVDKAFSIL 541
Query: 125 KRMNNEFNVVPRLRTYDPALFCFCENL-EAQKAYEEQE 161
M + P Y +L C NL E +K E E
Sbjct: 542 DIMRKS-GMKPGAVVYS-SLMGVCSNLGEWEKGLEVYE 577
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 87 RVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFC 146
+V+++ML+++ + N+ + AR D AF++IK M + VP TY +
Sbjct: 406 KVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRK-GFVPDTSTYSKVITF 464
Query: 147 FCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQY 181
CE ++ +KA+ L + G + VY Y
Sbjct: 465 LCEAMKVEKAF------LLFQEMKSVGVIPDVYTY 493
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 15/151 (9%)
Query: 70 NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNN 129
NS P K +VFD+ML + P + R+ + ++ FEL+ +M
Sbjct: 377 NSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEE---VFELLAKMRK 433
Query: 130 E------------FNVVPRLRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEK 177
+ R R +D L + E E + ++ G++E+
Sbjct: 434 MGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEE 493
Query: 178 VYQYLQKLRSTVRCVNEETGKIIEDWFSGQK 208
Y Y ++++ NE +I+ WFSG++
Sbjct: 494 AYGYYKEMKDKGMRPNENVEDMIQSWFSGKQ 524
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 70 NSATDPSLKDSALRHG-----FRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELI 124
N T +L D R G FR+FD+M+ + P + T + R + A +
Sbjct: 192 NVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF 251
Query: 125 KRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE 158
+ M N ++P L TY+ + +C+ +KA E
Sbjct: 252 RTMRNS-GMLPNLYTYNTMMDGYCKIAHVKKALE 284
>gi|71027557|ref|XP_763422.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350375|gb|EAN31139.1| hypothetical protein TP03_0402 [Theileria parva]
Length = 596
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 32/175 (18%)
Query: 70 NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNN 129
NS D + + R+ ++MLS+ + P+ +++ + + D D +F+L+ M
Sbjct: 279 NSVIDACARVGEMNSATRLLEEMLSSGIEPDLITFSTIIKGYCVQSDMDKSFQLLSVM-Y 337
Query: 130 EFNVVPRLRTYD--------PALFCFCENLEAQKAYEEQEI-------TALLKVSAGTGR 174
E ++P + Y+ L CE L +Q +E I T L+K+ +G+
Sbjct: 338 ERGIMPDVILYNSLLEGCVKSGLLWLCEKLWSQM--QEYNIPPSNFTLTILIKMYGRSGQ 395
Query: 175 VEKVYQYLQKLRSTVR--------------CVNEETGKIIEDWFSGQKVNGVSCD 215
++KV++ +L C+ ++ D + K+NGV D
Sbjct: 396 LDKVFELADELPKRYNFSINTHVYTCLMSACITNGKYSMVLDIYKYMKINGVKPD 450
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 70 NSATDPSLKDSALRHG-----FRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELI 124
N T +L D R G FR+FD+M+ + P + T + R + A +
Sbjct: 192 NVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF 251
Query: 125 KRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE 158
+ M N ++P L TY+ + +C+ +KA E
Sbjct: 252 RTMRNS-GMLPNLYTYNTMMDGYCKIAHVKKALE 284
>gi|255558614|ref|XP_002520332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540551|gb|EEF42118.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 441
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 9/159 (5%)
Query: 54 FRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAAS 113
FR+ L A + N D K + +F+ M +PN S R ++
Sbjct: 272 FRIMLFKGFAPDVVTYNCLIDGCCKTYRIERALELFEDMNRRGCVPNRVTYNSFIRYYSA 331
Query: 114 KKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTG 173
+ D A E+++RM N + + +Y P + C EA + E ++ L V G+
Sbjct: 332 VNEIDKAVEMLRRMQNMNHGLATSSSYTPIIHALC---EADRVLEARDFLLEL-VDGGSI 387
Query: 174 RVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGV 212
E Y+ + + + R VN +I+D F + +G+
Sbjct: 388 PREYTYKLVCETMKSAREVN-----LIDDEFHNRIKDGI 421
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 20/161 (12%)
Query: 30 LQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVF 89
+Q+ +S++ ++Y L + FN LL D +KDS + H ++VF
Sbjct: 218 VQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLL--------DALVKDSEVDHAYKVF 269
Query: 90 DQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRM------------NNEFNVVPRL 137
+ M + P+E T + R+ D + EL + M N +
Sbjct: 270 EDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNTMIQALANA 329
Query: 138 RTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKV 178
R D A+ F + +E + E + +L + A ++ K+
Sbjct: 330 RMVDKAILLFLKMVEKECRPSEFTYSVILHLLATERKLHKL 370
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 15/151 (9%)
Query: 70 NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNN 129
NS P K +VFD+ML + P + R+ + ++ FEL+ +M
Sbjct: 326 NSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEE---VFELLAKMRK 382
Query: 130 E------------FNVVPRLRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEK 177
+ R R +D L + E E + ++ G++E+
Sbjct: 383 MGCQPTVDTYIMLIRKLCRWRDFDNVLLLWNEMKEKGVGPDLSSYIVMIHGLFLNGKIEE 442
Query: 178 VYQYLQKLRSTVRCVNEETGKIIEDWFSGQK 208
Y Y ++++ NE +I+ WFSG++
Sbjct: 443 AYGYYKEMKEKGMRPNENVEDMIQSWFSGKQ 473
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 41/200 (20%)
Query: 26 FLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL--YL--------------CS 69
F I + S K ++ A S++++ + R S+ FN L+ Y+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 70 NSATDPSL-----------KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSD 118
S P + K+S + +FD+ML N ++PN T++ D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 119 YAFELIKRMNNEFNVVPRLRTYDPALFCFCEN---LEAQKAYEEQEI----------TAL 165
A E+ K+M ++ ++ P L TY+ ++ C+ +AQ +E + T L
Sbjct: 259 LAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 166 LKVSAGTGRVEKVYQYLQKL 185
+ + G +E ++Y +K+
Sbjct: 318 IDGNCKEGDLETAFEYRKKM 337
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN T++ D A E+ KRM ++ +++P L
Sbjct: 220 KESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQ-SLLPDL 278
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ + ++A+
Sbjct: 279 ITYNTLIYGLCKKGDLKQAHH 299
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 28 ISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFR 87
I L C + DL L+ + NF +++++L+Y + L+
Sbjct: 393 IVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIY--------AYCRHRQLKEALE 444
Query: 88 VFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCF 147
VF+ M+S+ + PN T + +++ AF + ++ +F VVP L TY +
Sbjct: 445 VFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKV-RQFGVVPSLCTYRVIIHGL 503
Query: 148 CE 149
C+
Sbjct: 504 CK 505
>gi|356567066|ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 488
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 55 RLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASK 114
R SL +N ++ +C+N D A FR+F+ M+ + V+P+ + ++ A K
Sbjct: 306 RKSLITWNTMVTVCANYGN----ADEA----FRLFEWMVCSGVVPDSVTLLALLVAYAHK 357
Query: 115 KDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE 158
D L + M+ ++ V PR+ Y + Q+AY+
Sbjct: 358 GLVDEGIRLFESMDRDYGVEPRIEHYGAVIDMLGRAGRLQEAYD 401
>gi|15228119|ref|NP_181269.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216847|sp|Q9ZUT4.1|PP192_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37320
gi|4056486|gb|AAC98052.1| hypothetical protein [Arabidopsis thaliana]
gi|37202040|gb|AAQ89635.1| At2g37320 [Arabidopsis thaliana]
gi|51969760|dbj|BAD43572.1| hypothetical protein [Arabidopsis thaliana]
gi|330254289|gb|AEC09383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 13/129 (10%)
Query: 13 NKKRKTNPNP-ETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNS 71
+K RK+ +P + F L +CT S L S++ L + + LH SNS
Sbjct: 210 SKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLH--------ISNS 261
Query: 72 ATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEF 131
K L+ FR+FDQ + +V+ +++ A+ + + A EL + M +
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQ----AIELFELMMPKS 317
Query: 132 NVVPRLRTY 140
P TY
Sbjct: 318 GTKPDAITY 326
>gi|398020760|ref|XP_003863543.1| hypothetical protein, conserved [Leishmania donovani]
gi|322501776|emb|CBZ36858.1| hypothetical protein, conserved [Leishmania donovani]
Length = 801
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 11/130 (8%)
Query: 22 PETNFLISLQS-CTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDS 80
PET +L C +D+A A L E LN + ++ +N L+ + L+ +
Sbjct: 167 PETAVYNTLLGYCAAVRDVAQATFLIEEMKQLNVQRDVNTYNCLMSVM--------LESA 218
Query: 81 ALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTY 140
+VF ++L N+ P ++ + A D D AF+ ++ M + ++P + TY
Sbjct: 219 PYEETLKVFQELLYLNLKPTIRSYNTILKAACRHGDYDRAFQFVEEMKKK-GLIPNVETY 277
Query: 141 DPALFCFCEN 150
+ L CE
Sbjct: 278 N-YLITVCEQ 286
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 14 KKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT 73
++ PN E + + + K+ +LA A+ L E L +L++ + ALL
Sbjct: 387 RRVALTPN-EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALL-------- 437
Query: 74 DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNV 133
D ++ ++ VF ML+ V PN+ T++ K+ +YA +++K M E +
Sbjct: 438 DGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM-KEKCI 496
Query: 134 VPRLRTYDPALFCFCENLEAQKA 156
P L Y L+ C ++A
Sbjct: 497 KPDLLLYGTILWGLCNESRLEEA 519
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 70 NSATDPSLKDSALRHG-----FRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELI 124
N T +L D R G FR+FD+M+ + P + T + R + A +
Sbjct: 192 NVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF 251
Query: 125 KRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE 158
+ M N ++P L TY+ + +C+ +KA E
Sbjct: 252 RTMRNS-GMLPNLYTYNTMMDGYCKIAHVKKALE 284
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + + +F++ML N ++PN T++ D A E+ K+M ++ ++ P L
Sbjct: 218 KESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDL 276
Query: 138 RTYDPALFCFCEN---LEAQKAYEEQEI----------TALLKVSAGTGRVEKVYQYLQK 184
TY+ ++ C+ +AQ +E + T L+ S G +E ++Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKR 336
Query: 185 L 185
+
Sbjct: 337 M 337
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML N ++PN T++ D A E+ K+M ++ ++ P L
Sbjct: 218 KESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDL 276
Query: 138 RTYDPALFCFCEN---LEAQKAYEEQEI----------TALLKVSAGTGRVEKVYQY 181
TY+ ++ C+ +AQ +E + T L+ S G +E ++Y
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEY 333
>gi|302799808|ref|XP_002981662.1| hypothetical protein SELMODRAFT_115078 [Selaginella moellendorffii]
gi|300150494|gb|EFJ17144.1| hypothetical protein SELMODRAFT_115078 [Selaginella moellendorffii]
Length = 585
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 30 LQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVF 89
+ C ++ +LA A +Y LS + FN+L+ C S A++ F VF
Sbjct: 141 IDGCARTGELAKAFGIYRIMLSKKIKPDRVIFNSLINACGRSG--------AVKRAFEVF 192
Query: 90 DQMLSNNVI-PNEALVTSVARLAASKKDSDYAFELIKRM 127
++ S ++I PN + S+ + D D A+E+ M
Sbjct: 193 TELKSESLINPNHVTMCSLIDACSKAGDGDSAYEVYTMM 231
>gi|85000739|ref|XP_955088.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65303234|emb|CAI75612.1| hypothetical protein, conserved [Theileria annulata]
Length = 559
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 37/180 (20%)
Query: 70 NSATDPSLKDSALRHG-----FRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELI 124
N+ T S+ D+ R G R+ ++MLS+ + P+ +++ + + D D +F+L+
Sbjct: 245 NTVTYNSIIDACARVGEMGSATRLLEEMLSSGIEPDLITFSTIIKGYCVQSDMDKSFQLL 304
Query: 125 KRMNNEFNVVPRLRTYD--------PALFCFCENLEAQKAYEEQEI-------TALLKVS 169
M E ++P + Y+ L CE L +Q +E I T L+K+
Sbjct: 305 SVM-YERGIMPDVILYNSLLEGCVKSGLLWLCEKLWSQM--QEYNIPPSNFTLTILIKMY 361
Query: 170 AGTGRVEKVYQYLQKLRSTVR--------------CVNEETGKIIEDWFSGQKVNGVSCD 215
+G+++KV++ +L C+ ++ D + K+NGV D
Sbjct: 362 GRSGQLDKVFELADELPKRYNFSINTHVYTCLMSACITNGRYAMVLDIYKYMKINGVKPD 421
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + ++FD+ML ++PN T++ D A E+ K+M ++ +++P L
Sbjct: 224 KESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQ-SLLPDL 282
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ + ++A++
Sbjct: 283 VTYNALIYGLCKKGDLKQAHD 303
>gi|410109917|gb|AFV61038.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
diamantinensis]
Length = 284
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML + PN T++ K D A E+ KRM ++ +++P L
Sbjct: 169 KESKMDDANELFDEMLVKGLAPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQ-SLLPDL 227
Query: 138 RTYDPALFCFCENLEAQKA 156
TY+ ++ C+ + ++A
Sbjct: 228 ITYNTLIYGLCKKGDLKQA 246
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 41/200 (20%)
Query: 26 FLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL--YL--------------CS 69
F I + S K ++ A S++++ + R S+ FN L+ Y+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 70 NSATDPSL-----------KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSD 118
S P + K+S + +FD+ML N ++PN T++ D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 119 YAFELIKRMNNEFNVVPRLRTYDPALFCFCEN---LEAQKAYEEQEI----------TAL 165
A E+ K+M ++ ++ P L TY+ ++ C+ +AQ +E + T L
Sbjct: 259 LAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 166 LKVSAGTGRVEKVYQYLQKL 185
+ + G +E ++Y +++
Sbjct: 318 IDGNCKEGDLETAFEYRKRM 337
>gi|356554511|ref|XP_003545589.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 421
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 39/217 (17%)
Query: 12 PNKKRKTNPNPETNFLISLQSCTKSKD-LATAIS-------------LYESALSLNFRLS 57
PN KT + E + SLQS +S D L T++S + E L N +
Sbjct: 49 PNSHIKTTLDQE---MASLQSSQRSWDFLITSLSPSSSDKARLILEWILEKMLKENEK-D 104
Query: 58 LHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDS 117
F+ L++LC +KD L G RVF M + V PN + S+ + S D
Sbjct: 105 RDLFSELIFLCGK------VKDVML--GMRVFSSMEATGVKPNSLVFNSLISVCLSSHDI 156
Query: 118 DYAFELIKRMNNEFNVVPRLRTYDPALFCFCE--NLEAQKAYEEQEITALLKVSAGTGRV 175
A L + M + + P TY+ + F + N++A A+ + A R+
Sbjct: 157 VTAVSLFEIMESSESYKPDFHTYNIFISAFSKSGNVDAMLAWYSAKKAA---------RL 207
Query: 176 EKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGV 212
Q + L S CVN KI + F ++G+
Sbjct: 208 GPDLQMFESLISG--CVNSRKFKIADRIFEEMMISGI 242
>gi|357154778|ref|XP_003576898.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g46610-like [Brachypodium distachyon]
Length = 623
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 84/223 (37%), Gaps = 42/223 (18%)
Query: 25 NFLISLQSCTKSKDLATAISLYESAL-------SLNFRLSLHHFNALLYLCSNSATDPSL 77
N LI L K+K A+ +YE L +L++ L + HFN LL N+A
Sbjct: 341 NHLIWLMG--KAKKWWAALEIYEDLLEKGPQPNNLSYELIMSHFNILL----NAAK---- 390
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNE------- 130
+ R G R+ D+M + P SV + ++ A + KRM +E
Sbjct: 391 RRGIWRWGVRLLDKMQEKGLKPGSREWNSVLLACSRAAETSAAVNIFKRMIDEGLKPDVV 450
Query: 131 -----FNVVPRLRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQYLQ-- 183
+ + + + YD AL + L+ T L+ + G G + V L+
Sbjct: 451 SYGALLSALEKGKLYDEALRVWKHMLKVGIDPNLHAYTILVSIYIGKGNHDMVDTVLRDM 510
Query: 184 ---KLRSTV--------RCVNEETGKIIEDWFSGQKVNGVSCD 215
K+ TV C + G +WF K+ + D
Sbjct: 511 LYAKIEPTVVTFNAIISACARNKKGGAAFEWFHRMKMQNIEPD 553
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 10/141 (7%)
Query: 16 RKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDP 75
+K P T + C+K K + A+ LY S++ F LL
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGK-INKALRLYHEMTGKGIAPSIYTFTTLL--------SG 516
Query: 76 SLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVP 135
+ +R ++F++M NV PN + + D AFE +K M E +VP
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM-TEKGIVP 575
Query: 136 RLRTYDPALFCFCENLEAQKA 156
+Y P + C +A +A
Sbjct: 576 DTYSYRPLIHGLCLTGQASEA 596
>gi|297823557|ref|XP_002879661.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325500|gb|EFH55920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 500
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 14 KKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT 73
+ ++PN T F L +CT S L S++ L + + LH SNS
Sbjct: 213 RNSTSDPNDYT-FTALLSACTGSGALGQGRSVHCQTLQMGLKSYLH--------ISNSLI 263
Query: 74 DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNV 133
K L+ FR+FDQ + +V+ +++ A+ + + A EL + M + +
Sbjct: 264 SMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQYGLATQ----AIELFELMMPKSGI 319
Query: 134 VPRLRTY 140
P TY
Sbjct: 320 KPDAITY 326
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN T++ D A E+ K++ ++ + P L
Sbjct: 218 KESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQ-GLSPDL 276
Query: 138 RTYDPALFCFCENLE-----------AQKAYEEQEI--TALLKVSAGTGRVEKVYQYLQK 184
TY+ ++ FC+ + + K + +I T L+ S G +E ++Y +K
Sbjct: 277 ITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKK 336
Query: 185 L 185
+
Sbjct: 337 M 337
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K LR G+++F+QML N + P+ + A K D A L + M + + P +
Sbjct: 20 KQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVS-VGLEPSI 78
Query: 138 RTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETG 197
TY+ L FC+ + ++A E L K A G V Y ST+ +TG
Sbjct: 79 YTYNSLLNAFCKETKMKEAME------LFKTMAEKGFEPDVVTY-----STIISGLCKTG 127
Query: 198 KIIE 201
K+ E
Sbjct: 128 KVTE 131
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 41/200 (20%)
Query: 26 FLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL--YL--------------CS 69
F I + S K ++ A S++++ + R S+ FN L+ Y+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 70 NSATDPSL-----------KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSD 118
S P + K+S + +FD+ML N ++PN T++ D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 119 YAFELIKRMNNEFNVVPRLRTYDPALFCFCEN---LEAQKAYEEQEI----------TAL 165
A E+ K+M ++ ++ P L TY+ ++ C+ +AQ +E + T L
Sbjct: 259 LAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 166 LKVSAGTGRVEKVYQYLQKL 185
+ + G +E ++Y +++
Sbjct: 318 IDGNCKEGDLETAFEYRKRM 337
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN T++ D A E+ K+M ++ ++ P L
Sbjct: 216 KESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDL 274
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ E ++A++
Sbjct: 275 ITYNTLIYGLCKKGELKQAHD 295
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML N ++PN T++ D A E+ ++M ++ +++P L
Sbjct: 218 KESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ-SLLPDL 276
Query: 138 RTYDPALFCFCEN---LEAQKAYEEQEI----------TALLKVSAGTGRVEKVYQYLQK 184
TY+ ++ C+ +AQ +E + T L+ + G +E ++Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336
Query: 185 L 185
+
Sbjct: 337 M 337
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 70 NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNN 129
NS D K + F +FD+M + V+P+ + V + D AF++++RM
Sbjct: 514 NSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERM-K 572
Query: 130 EFNVVPRLRTYDPALFCFCENLEAQKAYE 158
E VP + TY + C+ KA++
Sbjct: 573 EAKCVPDVVTYSALINGLCKAGTVDKAFD 601
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN T++ D A E+ K+M ++ +++P L
Sbjct: 220 KESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDL 278
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ + ++A++
Sbjct: 279 ITYNTLIYGLCKKGDLKQAHD 299
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K S + +FD+ML N ++PN T++ + D A E+ K+M ++ ++ P L
Sbjct: 218 KASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQ-SLSPDL 276
Query: 138 RTYDPALFCFCEN---LEAQKAYEEQEI----------TALLKVSAGTGRVEKVYQYLQK 184
TY+ ++ C+ +AQ +E + T L+ + G +E ++Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336
Query: 185 L 185
+
Sbjct: 337 M 337
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN T++ D A E+ K+M ++ +++P L
Sbjct: 199 KESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDL 257
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ + ++A++
Sbjct: 258 ITYNTLIYGLCKKGDLKQAHD 278
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 8/140 (5%)
Query: 24 TNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALR 83
T+ ++ + C K DLA + S+ F+ S+H NALL D + R
Sbjct: 25 TDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALL--------DVFARTKRHR 76
Query: 84 HGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPA 143
+ L+ +P+ + ++ + AF +I+ M ++ V P L+T++
Sbjct: 77 EAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLV 136
Query: 144 LFCFCENLEAQKAYEEQEIT 163
L C++ + A + E T
Sbjct: 137 LHGLCKSGKVLAAMDHFETT 156
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 63/165 (38%), Gaps = 14/165 (8%)
Query: 19 NPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL-YLCSNSA-TDPS 76
NPNP F + S KD A A L + +N + +C P
Sbjct: 343 NPNPSL-FNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 401
Query: 77 LKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPR 136
L D A + ++ +ML+ N + N+ V + AR D AF+LIK M + VP
Sbjct: 402 LLDLAEK----IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPD 456
Query: 137 LRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQY 181
TY + C + +KA+ L + G VY Y
Sbjct: 457 TSTYSKVITFLCHATKVEKAF------LLFQEMKMVGVTPDVYTY 495
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 63/165 (38%), Gaps = 14/165 (8%)
Query: 19 NPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL-YLCSNSA-TDPS 76
NPNP F + S KD A A L + +N + +C P
Sbjct: 109 NPNPSL-FNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 167
Query: 77 LKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPR 136
L D A + ++ +ML+ N + N+ V + AR D AF+LIK M + VP
Sbjct: 168 LLDLAEK----IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPD 222
Query: 137 LRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQY 181
TY + C + +KA+ L + G VY Y
Sbjct: 223 TSTYSKVITFLCHATKVEKAF------LLFQEMKMVGVTPDVYTY 261
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN T++ D A E+ K+M ++ +++P L
Sbjct: 224 KESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDL 282
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ + ++A++
Sbjct: 283 ITYNTLIYGLCKKGDLKQAHD 303
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 28/166 (16%)
Query: 20 PNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL--YL---------- 67
P F I + K +D+ A S++++ R S+ +N L+ Y+
Sbjct: 121 PASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180
Query: 68 ----CSNSATDPSL-----------KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAA 112
S P + K+S + +FD+ML ++PN T++
Sbjct: 181 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 240
Query: 113 SKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE 158
D A E+ K+M ++ +++P L TY+ ++ C+ + ++A++
Sbjct: 241 KNGRVDLALEIYKQMLSQ-SLLPDLITYNTLIYGLCKKGDLKQAHD 285
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+ L +F++ML N ++PN T++ + D A E+ K+M ++ + P L
Sbjct: 218 KEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQ-GLSPDL 276
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ E ++ ++
Sbjct: 277 ITYNTLIYGLCKKGELKQVHD 297
>gi|226493605|ref|NP_001151863.1| rf1 protein [Zea mays]
gi|195650381|gb|ACG44658.1| rf1 protein [Zea mays]
Length = 467
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 64 LLYLCSNSATDP-----------SLKDSALRHGFRVFDQMLSNNVIPNEALV-TSVARLA 111
LL +C ++ T P + +L H +FD+ML + P T VA L
Sbjct: 143 LLAVCRDAGTPPDACTYNILMRAAAASGSLGHARHLFDEMLRRGIAPTVVTFGTLVAALC 202
Query: 112 ASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCE--NLEAQKAYEEQ 160
A+ + D AFE+ + M +++V+P + Y + CE +++A A +E+
Sbjct: 203 AAGQLED-AFEVKEVMVRQYHVLPNVYVYTSLIKGLCEKGDVDAAMALKEE 252
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 41/200 (20%)
Query: 26 FLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL--YL--------------CS 69
F I + S K ++ A S++++ R S+ FN L+ Y+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 70 NSATDPSL-----------KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSD 118
S P + K+S + +FD+ML N ++PN T++ D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 119 YAFELIKRMNNEFNVVPRLRTYDPALFCFCEN---LEAQKAYEEQEI----------TAL 165
A E+ +M ++ ++ P L TY+ ++ C+ +AQ +E + T L
Sbjct: 259 LAMEIYXQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTL 317
Query: 166 LKVSAGTGRVEKVYQYLQKL 185
+ S G +E ++Y +++
Sbjct: 318 IDGSCKEGDLETAFEYRKRM 337
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 41/200 (20%)
Query: 26 FLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL--YL--------------CS 69
F I + S K ++ A S++++ + R S+ FN L+ Y+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 70 NSATDPSL-----------KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSD 118
S P + K+S + +FD+ML N ++PN T++ D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVD 258
Query: 119 YAFELIKRMNNEFNVVPRLRTYDPALFCFCEN---LEAQKAYEEQEI----------TAL 165
A E+ K+M ++ ++ P L TY+ ++ C+ +AQ +E + T L
Sbjct: 259 LAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 166 LKVSAGTGRVEKVYQYLQKL 185
+ + G +E ++Y +++
Sbjct: 318 IDGNCKEGDLETAFKYRKRM 337
>gi|168023641|ref|XP_001764346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684498|gb|EDQ70900.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 978
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 61/145 (42%), Gaps = 19/145 (13%)
Query: 7 ANPSKPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLY 66
A P KP+ + + +C ++ ++ A+ +Y++ N + S + A+++
Sbjct: 430 ATPIKPD---------HVTYGALISACARAGEVDRALEVYQNMRESNVKGSPACYTAVVH 480
Query: 67 LCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKR 126
CS + + V+D + + V P+E +++ A +D + AF +I
Sbjct: 481 ACSQKGN--------VDYALLVYDDLKKDGVKPDEVFFSALVDAAGHAQDIEKAFSIIAN 532
Query: 127 MNNEFNVVPRLRTYDPALFCFCENL 151
M E + P Y +L C NL
Sbjct: 533 MKKE-GLKPGAVVYS-SLMGVCSNL 555
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 63/165 (38%), Gaps = 14/165 (8%)
Query: 19 NPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL-YLCSNSA-TDPS 76
NPNP F + S KD A A L + +N + +C P
Sbjct: 174 NPNPSL-FNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 232
Query: 77 LKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPR 136
L D A + ++ +ML+ N + N+ V + AR D AF+LIK M + VP
Sbjct: 233 LLDLAEK----IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPD 287
Query: 137 LRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQY 181
TY + C + +KA+ L + G VY Y
Sbjct: 288 TSTYSKVITFLCHATKVEKAF------LLFQEMKMVGVTPDVYTY 326
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+ L +F++ML N ++PN T++ + D A E+ K+M ++ + P L
Sbjct: 218 KEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQ-GLSPDL 276
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ E ++ ++
Sbjct: 277 ITYNTLIYGLCKKGELKQVHD 297
>gi|449445204|ref|XP_004140363.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 37/147 (25%)
Query: 26 FLISLQSCTKSKDLATAISLYESAL-SLNFRLSLHHFNALLYLCSN-SATDPS------- 76
F ++L C K D+ + L+ + S+NF+ + FN+++ LC + + TD +
Sbjct: 315 FKLALDECIKCGDIKSGKYLWNEIIQSINFQPDTYMFNSMIALCCHQNDTDEARRLLDEM 374
Query: 77 -------------------LKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDS 117
LK LR +FD+M+ N IP+ A + R+ +D
Sbjct: 375 ICFGAFPNAETYNLLFQFLLKGRKLRDASAIFDEMIKNEFIPSHANCNAAIRIYIESQDP 434
Query: 118 DYAFELIKRMNNEFNVVPRLRTYDPAL 144
+ A ++ K M L+ YD L
Sbjct: 435 NGAIKVWKCM---------LKNYDSDL 452
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN T++ + D A E+ K+M ++ ++ P L
Sbjct: 218 KESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQ-SLSPDL 276
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ + ++A++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAHD 297
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 83/200 (41%), Gaps = 41/200 (20%)
Query: 26 FLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL--YL--------------CS 69
F I + S K ++ A S++++ + R S+ FN L+ Y+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 70 NSATDPSL-----------KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSD 118
S P + K+S + +FD+M+ N ++PN T++ D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 119 YAFELIKRMNNEFNVVPRLRTYDPALFCFCEN---LEAQKAYEEQEI----------TAL 165
A E+ K+M ++ ++ P L TY+ ++ C+ +AQ +E + T L
Sbjct: 259 LAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 166 LKVSAGTGRVEKVYQYLQKL 185
+ + G +E ++Y +++
Sbjct: 318 IDGNCKEGDLETAFEYRKRM 337
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN T++ D A E+ K+M ++ +++P L
Sbjct: 224 KESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDL 282
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ + ++A++
Sbjct: 283 ITYNTLIYGLCKKGDLKQAHD 303
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 87 RVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFC 146
++F +M+ NVIPNE + + ++ AFEL+ M E +VP TY P +
Sbjct: 516 KLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEM-VEKGLVPDTYTYRPLISG 574
Query: 147 FCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSG 206
C TGRV + +++ L+ + +NE G +
Sbjct: 575 LCS----------------------TGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYT 612
Query: 207 QKVNGVSCDLGLVKNAVL 224
+NG+ C +GL+ A L
Sbjct: 613 ALINGL-CKIGLMDKAEL 629
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 10/146 (6%)
Query: 11 KPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSN 70
K +K + P T F+ + KS D+ ++ +++ ++H FNAL+ N
Sbjct: 579 KEMQKLRHRPTTRT-FMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALI----N 633
Query: 71 SATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNE 130
+ + A+ + D+M V NE T + + AS D+ AFE R+ NE
Sbjct: 634 GLVEKRQMEKAVE----ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 689
Query: 131 FNVVPRLRTYDPALFCFCENLEAQKA 156
+ + TY+ L C++ Q A
Sbjct: 690 -GLEVDIFTYEALLKACCKSGRMQSA 714
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML N ++PN T++ D A E+ ++M ++ +++P L
Sbjct: 218 KESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ-SLLPDL 276
Query: 138 RTYDPALFCFCE 149
TY+ ++ C+
Sbjct: 277 ITYNTLIYGLCK 288
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN T++ D A E+ K+M ++ ++ P L
Sbjct: 207 KESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLXPDL 265
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ + ++A++
Sbjct: 266 ITYNTLIYGLCKKGDLKQAHD 286
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 12/140 (8%)
Query: 20 PNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL-YLCSNSATDPSLK 78
PN +T + I ++ D + A L+E + + +N+LL LC D +
Sbjct: 190 PNAKT-YSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEA-- 246
Query: 79 DSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLR 138
+++F +M SN + P+ + R D AF+++ RM +N+VP +
Sbjct: 247 -------YKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRR-YNLVPNVF 298
Query: 139 TYDPALFCFCENLEAQKAYE 158
TY+ + C++ + +AY+
Sbjct: 299 TYNCIVKKLCKSEKVDEAYQ 318
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 14 KKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT 73
K+ +PN T F + K+ DL A+SLY+ + L++ + AL+
Sbjct: 190 KRDALSPNVVT-FTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI-------- 240
Query: 74 DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNE 130
D K ++ ++ +M+ + V PN + T++ + DSD A + + +M N+
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 88 VFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCF 147
VF++M+ N +P+ + ++ K A E + RM E+ + P + TY+ L F
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALE-VYRMMGEYGIRPTVTTYNTMLHSF 247
Query: 148 CENLEAQKAYE 158
C+ E Q+A +
Sbjct: 248 CKGGEVQRALD 258
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 41/200 (20%)
Query: 26 FLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL--YL--------------CS 69
F I + S K ++ A S++++ + R S+ FN L+ Y+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 70 NSATDPSL-----------KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSD 118
S P + K+S + +FD+ML N ++PN T++ D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 119 YAFELIKRMNNEFNVVPRLRTYDPALFCFCEN---LEAQKAYEEQEI----------TAL 165
A E+ K M ++ ++ P L TY+ ++ C+ +AQ +E + T L
Sbjct: 259 LAMEIYKLMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 166 LKVSAGTGRVEKVYQYLQKL 185
+ + G +E ++Y +++
Sbjct: 318 IDGNCKEGDLETAFEYRKRM 337
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 30/170 (17%)
Query: 35 KSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLS 94
+ DLA+A+ L+ +++ F L+ S D ++ ++A R+FD+M+
Sbjct: 452 RKGDLASAMELHREMARNGVSGNVYTFTTLI---SGFCKDGNMDEAA-----RLFDKMID 503
Query: 95 NNVIPNE----ALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCEN 150
++V+PNE ++ R+ +K AF+L +M + + P TY + C
Sbjct: 504 SSVVPNEVTFNVMIEGYCRVGNVRK----AFQLYDQMVDR-GLTPDNYTYRSLISVLCLT 558
Query: 151 LEAQKAYEEQE-------------ITALLKVSAGTGRVEKVYQYLQKLRS 187
L A KA E + +T L+ GR+ + Y ++R+
Sbjct: 559 LGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRA 608
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 73/182 (40%), Gaps = 25/182 (13%)
Query: 25 NFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHF--NALLYLCSNSATDPSLKDSAL 82
+F + CT+ SL+ A+S R+ + + N + Y + LK L
Sbjct: 266 DFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTY---RTLLTGFLKKKQL 322
Query: 83 RHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDP 142
R+ + M++ P+ +L S+ + +D YA++L RMN P Y+
Sbjct: 323 GWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNT-CGCPPGYVVYNI 381
Query: 143 ALFCFCENLE---------AQKAYEEQEITALL----------KVSAGTGRVEKVYQYLQ 183
+ C E A+K YEE + + + + G G+ EK +Q ++
Sbjct: 382 FIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVK 441
Query: 184 KL 185
++
Sbjct: 442 EM 443
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN T++ D A E+ K+M ++ ++ P L
Sbjct: 207 KESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQ-SLSPDL 265
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ + ++A++
Sbjct: 266 ITYNTLIYGLCKKGDLKQAHD 286
>gi|403364284|gb|EJY81900.1| PPR repeat-containing protein, putative [Oxytricha trifallax]
Length = 551
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 26 FLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSAL--- 82
F+ L++C++ D TA + + F ++ + +N L+ + +N+ +P +K+S +
Sbjct: 283 FVAILKACSQLGDTKTAYDILQEMKQKGFPMTEYVYNELIRVYANACREPDIKESHIDMY 342
Query: 83 -RHGFRVFDQMLSNNVIPNEALVTSVARLAAS 113
+ + + D M +NV PN ++ S+ + A+
Sbjct: 343 IKDCWELMDNMKKDNVEPNIHILNSLVHVYAN 374
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 31/158 (19%)
Query: 30 LQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVF 89
+ C K+ L A ++ + L + +++ +++L+ D KD L +V
Sbjct: 421 IDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLI--------DRLFKDKRLDLALKVL 472
Query: 90 DQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCE 149
+ML N+ PN + T + +D A++L+ M E P + TY
Sbjct: 473 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMM-EEKGCNPNVVTY--------- 522
Query: 150 NLEAQKAYEEQEITALLKVSAGTGRVEKVYQYLQKLRS 187
TA++ +GRVEK + LQ++ S
Sbjct: 523 -------------TAMIDGFGKSGRVEKCLELLQQMSS 547
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN T++ D A E+ K+M ++ +++P L
Sbjct: 224 KESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDL 282
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY+ ++ C+ + +A++
Sbjct: 283 ITYNTLIYGLCKKGDLNQAHD 303
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 63/165 (38%), Gaps = 14/165 (8%)
Query: 19 NPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL-YLCSNSA-TDPS 76
NPNP F + S KD A A L + +N + +C P
Sbjct: 174 NPNPSL-FNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 232
Query: 77 LKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPR 136
L D A + ++ +ML+ N + N+ V + AR D AF+LIK M + VP
Sbjct: 233 LLDLAEK----IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPD 287
Query: 137 LRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQY 181
TY + C + +KA+ L + G VY Y
Sbjct: 288 TSTYSKVITFLCHATKVEKAF------LLFQEMKMVGVTPDVYTY 326
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 61 FNALLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYA 120
+N L+ C +S + L + VFD+ML +V PN ++ D A
Sbjct: 151 YNVLINACCSSGS--------LGDAWNVFDEMLRKHVCPNVVTFGTLISGLCGDSRLDEA 202
Query: 121 FELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYE-EQEITA-LLKVSAG------- 171
F L + M FNV P Y + C E A+E ++E+ A L++ +G
Sbjct: 203 FRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIA 262
Query: 172 ----TGRVEKVYQYLQKLR 186
GR ++V+ L+++R
Sbjct: 263 ALFKVGRKDEVFVVLEEMR 281
>gi|403222430|dbj|BAM40562.1| pentatricopeptide repeat containing protein [Theileria orientalis
strain Shintoku]
Length = 784
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 23 ETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL 65
E F I ++SC+ S+D A+SLY+ LSLN ++H + L+
Sbjct: 353 EVLFTIMIKSCSVSRDAEKALSLYQEMLSLNLYPTIHTYTELI 395
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 22/176 (12%)
Query: 16 RKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLY-LCSNSATD 74
R P+ + ++ +Q+C D +SLY + H ++ ++ LC
Sbjct: 231 RNVAPD-KITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLC------ 283
Query: 75 PSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVV 134
K+ G+ VF++M+ N A+ T++ A + A L +RM E +
Sbjct: 284 ---KEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKE-GLE 339
Query: 135 PRLRTYDPALFCFCENLEAQKAYEEQE--------ITALLKVSA--GTGRVEKVYQ 180
P + TY + C C++ +A E E + A+L S G G+ +V++
Sbjct: 340 PDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHE 395
>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Query: 14 KKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSAT 73
K+ PN T F + K+ DL +SLYE + L++ + AL+
Sbjct: 190 KRDALFPNVVT-FTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALI-------- 240
Query: 74 DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNE 130
D K ++ ++ +ML + V PN + T++ + DSD A + + +M N+
Sbjct: 241 DGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQ 297
>gi|356560394|ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 612
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 18/161 (11%)
Query: 70 NSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNN 129
NS P K + ++FD+ML ++ P + R+ +K++ FEL+ +M
Sbjct: 409 NSLIKPLCKAHKVDEAKQLFDEMLKRHLSPTIQTFHAFFRILRTKEE---VFELLDKM-K 464
Query: 130 EFNVVPRLRTYDPALFCFC------ENLEAQKAYEEQEIT-------ALLKVSAGTGRVE 176
E P + TY + FC + + A E EI+ L+ G++E
Sbjct: 465 ELRCYPTIETYIMLIRKFCRWCQLDDVFKIWDAMREDEISHDRSSYIVLIHGLFLNGKLE 524
Query: 177 KVYQYLQKLRSTVRCVNEETGKIIEDWFSG-QKVNGVSCDL 216
+ +Y +++ +T ++++ W SG Q G DL
Sbjct: 525 EAQRYYAEMQEKGFLPEPKTEEMLQAWVSGKQATEGQEKDL 565
>gi|302771776|ref|XP_002969306.1| hypothetical protein SELMODRAFT_61378 [Selaginella moellendorffii]
gi|300162782|gb|EFJ29394.1| hypothetical protein SELMODRAFT_61378 [Selaginella moellendorffii]
Length = 587
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 35 KSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLS 94
K+ DL+ +Y++A R L +N +L+ S + +++ + H ++ +ML+
Sbjct: 418 KAGDLSKVEEVYQAATGQGLRPDLALYNIVLHGLSGAK-----QEAGVAH---LWAEMLN 469
Query: 95 NNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCEN 150
N V P+ A T + A ++I +M + V+P TY+ L C C+N
Sbjct: 470 NGVSPSVATYTILIHALCRDNRLQAARQIIDKMKGQ-GVLPDAITYNTLLHCLCKN 524
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 12/140 (8%)
Query: 20 PNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALL-YLCSNSATDPSLK 78
PN +T + I ++ D + A L+E + + +N+LL LC D +
Sbjct: 217 PNAKT-YSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEA-- 273
Query: 79 DSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLR 138
+++F +M SN + P+ + R D AF+++ RM +N+VP +
Sbjct: 274 -------YKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRR-YNLVPNVF 325
Query: 139 TYDPALFCFCENLEAQKAYE 158
TY+ + C++ + +AY+
Sbjct: 326 TYNCIVKKLCKSEKVDEAYQ 345
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Query: 20 PNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKD 79
PN T + I + + K K+++ A+ +YE + +++L+Y+ S + LKD
Sbjct: 325 PNVVT-YTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAG---RLKD 380
Query: 80 SALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRT 139
+ VF+ M IP+ ++ A + A +L+ +M E + P L T
Sbjct: 381 AR-----DVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKM-EESSCKPDLNT 434
Query: 140 YDPALFCFCEN 150
Y P L C N
Sbjct: 435 YSPLLKMCCRN 445
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 13/146 (8%)
Query: 11 KPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSN 70
K +K + P T F+ + KS D+ ++ +++ ++H FN L+ N
Sbjct: 578 KEMQKLRHRPTTRT-FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI----N 632
Query: 71 SATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNE 130
+ R + D+M V NE T + + AS D+ AFE R+ NE
Sbjct: 633 GLVEK-------RQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 685
Query: 131 FNVVPRLRTYDPALFCFCENLEAQKA 156
+ + TY+ L C++ Q A
Sbjct: 686 -GLDVDIFTYEALLKACCKSGRMQSA 710
>gi|367007302|ref|XP_003688381.1| hypothetical protein TPHA_0N01660 [Tetrapisispora phaffii CBS 4417]
gi|357526689|emb|CCE65947.1| hypothetical protein TPHA_0N01660 [Tetrapisispora phaffii CBS 4417]
Length = 390
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 24/131 (18%)
Query: 29 SLQSCTKSK--DLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRHGF 86
SLQ+ + K DL+ SL++ +F L+ H +L A +LKD F
Sbjct: 155 SLQAAERKKTGDLSVR-SLHDIVKPEDFILNSEHLTTILV-----AVPKTLKD-----DF 203
Query: 87 RVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAF---ELIKRMNNEFNVVPRLRTYDPA 143
+ + L++N++P+ A V + KD++Y L K+ N+FN+ R R Y P
Sbjct: 204 QENYEKLADNIVPSSATVIA--------KDAEYILYNVHLFKKSVNKFNIAARERKYIPR 255
Query: 144 LFCFCENLEAQ 154
F + E L Q
Sbjct: 256 EFNYSEELIDQ 266
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 10/146 (6%)
Query: 11 KPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSN 70
K +K + P T F+ + +S D+ A+ +++ ++H FNAL+
Sbjct: 558 KEMQKERHRPTTRT-FMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGL-- 614
Query: 71 SATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNE 130
++ + + D+M + PNE T++ AS D+ AFE ++ E
Sbjct: 615 ------VEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTE 668
Query: 131 FNVVPRLRTYDPALFCFCENLEAQKA 156
+ + TY+ L C++ Q A
Sbjct: 669 -GLELDVYTYEALLKACCKSGRMQSA 693
>gi|302810233|ref|XP_002986808.1| hypothetical protein SELMODRAFT_41291 [Selaginella moellendorffii]
gi|300145462|gb|EFJ12138.1| hypothetical protein SELMODRAFT_41291 [Selaginella moellendorffii]
Length = 587
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 35 KSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVFDQMLS 94
K+ DL+ +Y++A R L +N +L+ S + +++ + H ++ +ML+
Sbjct: 418 KAGDLSKVEEVYQAATGQGLRPDLALYNIVLHGLSGAK-----QEAGVAH---LWAEMLN 469
Query: 95 NNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCEN 150
N V P+ A T + A ++I +M + V+P TY+ L C C+N
Sbjct: 470 NGVSPSVATYTILIHALCRDNRLQAARQIIDKMKGQ-GVLPDAITYNTLLHCLCKN 524
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 88 VFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCF 147
+ D+ +S+ +P+ + +A + D AFEL+K M+ P L TY+ +
Sbjct: 102 LVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGN-GCTPNLVTYNTLIDGL 160
Query: 148 CENLEAQKAYEEQEITALLKVSAGTGRVEKVYQY 181
C+ + +KAYE LL+ +G V V Y
Sbjct: 161 CKASKTEKAYE------LLETLVSSGFVPDVVTY 188
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 13/146 (8%)
Query: 11 KPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSN 70
K +K + P T F+ + KS D+ ++ +++ ++H FN L+ N
Sbjct: 578 KEMQKLRHRPTTRT-FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI----N 632
Query: 71 SATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNE 130
+ R + D+M V NE T + + AS D+ AFE R+ NE
Sbjct: 633 GLVEK-------RQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 685
Query: 131 FNVVPRLRTYDPALFCFCENLEAQKA 156
+ + TY+ L C++ Q A
Sbjct: 686 -GLDVDIFTYEALLKACCKSGRMQSA 710
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 16 RKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLY-LCSNSATD 74
R P+ T F + K+ A SL N R S +N L+ LC D
Sbjct: 290 RGVTPDTVT-FNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVD 348
Query: 75 PSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVV 134
+ KD + D+ +S+ +P+ + +A + D AFEL+K M+ +
Sbjct: 349 RA-KD--------LVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGK-GCT 398
Query: 135 PRLRTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKVYQY 181
P L TY+ + C+ + +KAYE LL+ +G V V Y
Sbjct: 399 PNLVTYNTLIDGLCKASKTEKAYE------LLESLVSSGFVPDVVTY 439
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 12/141 (8%)
Query: 19 NPNPET-NFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSL 77
PN T N LIS + K+ L A+ +Y+ L N S+ +++L+ C
Sbjct: 281 TPNSTTYNALIS--AYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACE-------- 330
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K R+F++M + +PN S+ A + A E+ ++MN P +
Sbjct: 331 KAGQWETALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNAH-GCTPDV 389
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY + + + QKA +
Sbjct: 390 VTYTALISAYERGGQWQKALQ 410
>gi|397615121|gb|EJK63235.1| hypothetical protein THAOC_16122 [Thalassiosira oceanica]
Length = 703
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 66/190 (34%), Gaps = 51/190 (26%)
Query: 30 LQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNS--------------ATDP 75
+Q C + DL AI+ + SAL N +L F LL LC + T+P
Sbjct: 60 IQLCCRDNDLPLAITTFHSALQNNVKLEAQTFYILLNLCDGTFAERTGVHVGTPRAHTNP 119
Query: 76 SLKDSALR----------------------------HGFRVFDQMLSNNVIPNEALVTSV 107
+D H ++ + M + N+ E T++
Sbjct: 120 GGRDDDKTKSSRTIEKTDSQKTKVSPAQISAECRQGHAHQIHELMSALNIALTEQAYTAL 179
Query: 108 ARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENL---------EAQKAYE 158
RLA+ D D A + +LR Y L +C L Q+++
Sbjct: 180 VRLASRVGDYDSAERYLDEAERTQQCKVKLRMYSSLLRAYCGELSDGDGVTDTSRQRSHS 239
Query: 159 EQEITALLKV 168
++ ++ LKV
Sbjct: 240 QEGLSKALKV 249
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 11 KPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSN 70
K +K + P T F+ + KS D+ ++ +++ ++H FN L+ N
Sbjct: 578 KEMQKLRHRPTTRT-FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI----N 632
Query: 71 SATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNE 130
+ + A+ + D+M V NE T + + AS D+ AFE R+ NE
Sbjct: 633 GLVEKRQMEKAVE----ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 688
Query: 131 FNVVPRLRTYDPALFCFCENLEAQKA 156
+ + TY+ L C++ Q A
Sbjct: 689 -GLDVDIFTYEALLKACCKSGRMQSA 713
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 12/141 (8%)
Query: 19 NPNPET-NFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSL 77
PN T N LIS + K+ L A+ +Y+ L N S+ +++L+ C
Sbjct: 205 TPNSTTYNALIS--AYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACE-------- 254
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K R+F++M +N +PN S+ A + A E+ ++M P +
Sbjct: 255 KAGQWETALRIFNEMQQDNCVPNTVTYNSLVTACAQGGQWEKATEVFEQMTAH-GCTPDV 313
Query: 138 RTYDPALFCFCENLEAQKAYE 158
TY + + + QKA +
Sbjct: 314 VTYTALISAYERGGQWQKALQ 334
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 20/174 (11%)
Query: 49 ALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRH-----GFRVFDQMLSNNVIPNEAL 103
AL+L L+ H A L N+ D L+ S+ H RVF M+ N V PN
Sbjct: 151 ALTL-LHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYT 209
Query: 104 VTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFCFCENLEAQKAYEEQEIT 163
+ R S+ D + +++M E + P + TY+ + C+ + ++A
Sbjct: 210 YNVIIRGVVSQGDLEKGLGFMRKMEKE-GISPNVVTYNTLIDASCKKKKVKEAMALLRAM 268
Query: 164 ALLKVSA-------------GTGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWF 204
A+ V+A G GR+ +V + ++++R +E T + + F
Sbjct: 269 AVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGF 322
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 7 ANPSKPNKKRKTNPNPETNFLI---SLQSCTKSKDLATAISLYESALSLNFRLSLHHFNA 63
++PS + + +PE N + + KSK A+ ++E N + LH
Sbjct: 111 SSPSVLTSLVRIHDDPEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTV 170
Query: 64 LLYLCSNSATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFEL 123
L+ + LKD ++V+ +M+ + V+PN + + + +D + A +
Sbjct: 171 LM--------NSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFI 222
Query: 124 IKRMNNEFNVVPRLRTYDPALFCFC------ENLEAQKAYEEQEI 162
+ M + VVP + TY+ + +C E L Q E + I
Sbjct: 223 LNEMEVK-GVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGI 266
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 60/157 (38%), Gaps = 29/157 (18%)
Query: 87 RVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDPALFC 146
R+ M++ PN + S+ +D YA++L K+M + P Y+ +
Sbjct: 328 RILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKM-IKCGCQPGYLLYNIFIGS 386
Query: 147 FCENLE---------AQKAYEEQ----------EITALLKVSAGTGRVEKVYQYLQKLRS 187
C N E A+KAY E ++ + G G+ +K ++ + ++ S
Sbjct: 387 ICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMS 446
Query: 188 TVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVL 224
+ D + KV G CD V+ A L
Sbjct: 447 K---------GFVPDDSTYSKVIGFLCDASKVEKAFL 474
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 11 KPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSN 70
K +K + P T F+ + KS D+ ++ +++ ++H FN L+ N
Sbjct: 576 KEMQKLRHRPTTRT-FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI----N 630
Query: 71 SATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNE 130
+ + A+ + D+M V NE T + + AS D+ AFE R+ NE
Sbjct: 631 GLVEKRQMEKAVE----ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 686
Query: 131 FNVVPRLRTYDPALFCFCENLEAQKA 156
+ + TY+ L C++ Q A
Sbjct: 687 -GLDVDIFTYEALLKACCKSGRMQSA 711
>gi|297827165|ref|XP_002881465.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327304|gb|EFH57724.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 35/187 (18%)
Query: 16 RKTNPNPETNFLISLQSCTKSKDLATAI--SLYESALSLNFRLSLHHFNALLYLCSNSAT 73
R+ P+ ET ++ L +C + L + + L LN RL +
Sbjct: 208 RQFCPD-ETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLG------------TALV 254
Query: 74 DPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNV 133
D K L++ VF++M NV A++ +A+ +++ A +L +M E +V
Sbjct: 255 DMYAKSGGLKYARLVFERMADKNVWTWSAMIVGLAQYGFAEE----ALQLFSKMMKESSV 310
Query: 134 VPRLRTYDPALFCFCENL----EAQKAYEEQE-----------ITALLKVSAGTGRVEKV 178
P T+ + C C + + K + E E A++ + GR+ +
Sbjct: 311 RPNYVTF-LGVLCACSHTGLVDDGYKYFHEMEKRHKIKPMMIHYGAMVDILGRAGRLNEA 369
Query: 179 YQYLQKL 185
Y ++QK+
Sbjct: 370 YDFIQKM 376
>gi|125536310|gb|EAY82798.1| hypothetical protein OsI_38004 [Oryza sativa Indica Group]
Length = 669
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 22/142 (15%)
Query: 25 NFLISLQSCTKSKDLATAISLYESAL-------SLNFRLSLHHFNALLYLCSNSATDPSL 77
N LI L K+K A+ +YE L +L++ L + HFN LL N+A
Sbjct: 348 NHLIWLMG--KAKKWWAALEIYEDLLDKGPKPNNLSYELIMSHFNILL----NAAK---- 397
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
+ R G R+ D+M + P +V + ++ A ++ KRM ++ + P +
Sbjct: 398 RRGIWRWGVRLLDKMQQKGLKPGSREWNAVLLACSRAAETSAAVDIFKRMIDQ-GLTPDV 456
Query: 138 RTYDPALFCFCENLEAQKAYEE 159
+Y L LE K Y+E
Sbjct: 457 VSYGALL----SALEKGKLYDE 474
>gi|308810889|ref|XP_003082753.1| pentatricopeptide (ISS) [Ostreococcus tauri]
gi|116061222|emb|CAL56610.1| pentatricopeptide (ISS) [Ostreococcus tauri]
Length = 923
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 22 PET-NFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDS 80
P+T F + +C + + A+ LY L+ SL + +L+ S S + S
Sbjct: 455 PDTITFNTLIHACASNGEDGKAMELYRDMLANGVPPSLRTYVSLIVSLSRSK-----RGS 509
Query: 81 ALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTY 140
+ R+FD + + V PNE L TS+ AF+ +RM E +V TY
Sbjct: 510 QVEEAERLFDVAIEDGVEPNEFLFTSLMDAQVKANRPFAAFDTYERM-READVSRTTVTY 568
Query: 141 DPAL-FCFCENLE---AQKAYE-EQEIT------------ALLKVSAGTGRVEKVYQYLQ 183
AL C+ + E ++AY +++T L+V + GR+E++ + ++
Sbjct: 569 GCALQACYYVDDEEDGVERAYAILRDMTESGVQMNDWCSNTFLRVISRAGRIEEMLEEVK 628
Query: 184 KLRSTVRCVNEETGKII 200
K+ + +ET + I
Sbjct: 629 KIVRRKGMLEQETFEAI 645
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 14/121 (11%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+M+ N ++PN T++ D A E K M + P L
Sbjct: 218 KESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQ-GFSPDL 276
Query: 138 RTYDPALFCFCEN---LEAQKAYEEQEI----------TALLKVSAGTGRVEKVYQYLQK 184
TY+ ++ C+ +AQ +E + T L+ S G +E ++Y ++
Sbjct: 277 ITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKR 336
Query: 185 L 185
+
Sbjct: 337 M 337
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 10/146 (6%)
Query: 11 KPNKKRKTNPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSN 70
K +K + P T F+ + +S D+ A+ +++ ++H FNAL+
Sbjct: 537 KEMQKERHRPTTRT-FMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGL-- 593
Query: 71 SATDPSLKDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNE 130
++ + + D+M + PNE T++ AS D+ AFE ++ E
Sbjct: 594 ------VEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTE 647
Query: 131 FNVVPRLRTYDPALFCFCENLEAQKA 156
+ + TY+ L C++ Q A
Sbjct: 648 -GLELDVYTYEALLKACCKSGRMQSA 672
>gi|328874279|gb|EGG22645.1| hypothetical protein DFA_04775 [Dictyostelium fasciculatum]
Length = 628
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/117 (18%), Positives = 50/117 (42%), Gaps = 13/117 (11%)
Query: 83 RHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRLRTYDP 142
++ ++ D+++ N+ P + V ++ D+D FE++K M N + +VP Y
Sbjct: 225 KNALKLLDRVIKENMSPTVHMFDGVINAYSNAGDTDKPFEILKVMENTYGLVPDHVNYTT 284
Query: 143 ALFCFCENLEAQKAYE-------------EQEITALLKVSAGTGRVEKVYQYLQKLR 186
+ +N + A E ++ ++ A R+EK + Y ++ +
Sbjct: 285 MVHGLIKNKKIDTAIEVFSDAKTKGMNPDSVTLSVMIDACAKDDRIEKAFNYYEEFK 341
>gi|330934400|ref|XP_003304531.1| hypothetical protein PTT_17160 [Pyrenophora teres f. teres 0-1]
gi|311318772|gb|EFQ87354.1| hypothetical protein PTT_17160 [Pyrenophora teres f. teres 0-1]
Length = 818
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 2 SNTTSANPSKPNKKRKT---------NPNPETNFLISLQSCTKSKDLATAISLYESALSL 52
S+TT P P T + NP F +L S + + L + ++ ES+
Sbjct: 571 SSTTGTTPFPPGALATTAQALSRLLISINPSHVFNAALPSSSAIRPLLSQLTRTESS--- 627
Query: 53 NFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFR--VFDQMLSNNVIPNEALVTSVARL 110
LH F ALL L + ++ D S +D +R F V D +LSNN + A + L
Sbjct: 628 --TWQLHAFEALLALTNLASLDRSTQDHIIRQSFDTVVDDLLLSNNTMIRRAATELICNL 685
Query: 111 AAS 113
AS
Sbjct: 686 MAS 688
>gi|108862483|gb|ABA97464.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 675
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 84/225 (37%), Gaps = 52/225 (23%)
Query: 25 NFLISLQSCTKSKDLATAISLYESAL-------SLNFRLSLHHFNALLYLCSNSATDPSL 77
N LI L K+K A+ +YE L +L++ L + HFN LL N+A
Sbjct: 354 NHLIWLMG--KAKKWWAALEIYEDLLDKGPKPNNLSYELIMSHFNILL----NAAK---- 403
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
+ R G R+ D+M + P +V + ++ A ++ KRM ++ + P +
Sbjct: 404 RRGIWRWGVRLLDKMQQKGLKPGSREWNAVLLACSRAAETSAAVDIFKRMIDQ-GLTPDV 462
Query: 138 RTYDPALFCFCENLEAQKAYEE-----------------QEITALLKVSAGTGRVEKVYQ 180
+Y L LE K Y+E T L+ + G G V
Sbjct: 463 VSYGALL----SALEKGKLYDEALRVWEHMCKVGVKPNLHAYTILVSIYIGKGNHAMVDS 518
Query: 181 YLQ-----KLRSTV--------RCVNEETGKIIEDWFSGQKVNGV 212
L+ K+ TV CV G +WF KV +
Sbjct: 519 VLRGMLSAKIEPTVVTFNAIISACVRNNKGGSAFEWFHRMKVQNI 563
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN T++ D A E+ K+M ++ ++ P L
Sbjct: 222 KESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDL 280
Query: 138 RTYDPALFCFCEN---LEAQKAYEEQEI----------TALLKVSAGTGRVEKVYQYLQK 184
TY+ ++ C+ +AQ +E + T L+ S G +E ++Y +
Sbjct: 281 VTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXR 340
Query: 185 L 185
+
Sbjct: 341 M 341
>gi|297742819|emb|CBI35573.3| unnamed protein product [Vitis vinifera]
Length = 12183
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 19 NPNPETNFLISLQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLK 78
+P NF I L +CT+ LA L+ + L L + +L+ + + A D S+
Sbjct: 54 DPTQHFNFSIVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVD 113
Query: 79 DSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDS 117
DS +VF+QM +NV+ A++T+ + K++
Sbjct: 114 DSR-----KVFEQMPEHNVMSWTAIITAYVQSGECDKEA 147
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 60/161 (37%), Gaps = 20/161 (12%)
Query: 30 LQSCTKSKDLATAISLYESALSLNFRLSLHHFNALLYLCSNSATDPSLKDSALRHGFRVF 89
LQ + +D A +Y L + L + FN LL D KD + ++VF
Sbjct: 195 LQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLL--------DALAKDQKVDKAYKVF 246
Query: 90 DQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRM------------NNEFNVVPRL 137
+ M + P+ T + R+ +D + L + M N + +
Sbjct: 247 EDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKG 306
Query: 138 RTYDPALFCFCENLEAQKAYEEQEITALLKVSAGTGRVEKV 178
R D A+ F + +E E + LL V G++ K+
Sbjct: 307 RMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKL 347
>gi|115488188|ref|NP_001066581.1| Os12g0283900 [Oryza sativa Japonica Group]
gi|113649088|dbj|BAF29600.1| Os12g0283900 [Oryza sativa Japonica Group]
Length = 675
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 84/225 (37%), Gaps = 52/225 (23%)
Query: 25 NFLISLQSCTKSKDLATAISLYESAL-------SLNFRLSLHHFNALLYLCSNSATDPSL 77
N LI L K+K A+ +YE L +L++ L + HFN LL N+A
Sbjct: 354 NHLIWLMG--KAKKWWAALEIYEDLLDKGPKPNNLSYELIMSHFNILL----NAAK---- 403
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEALVTSVARLAASKKDSDYAFELIKRMNNEFNVVPRL 137
+ R G R+ D+M + P +V + ++ A ++ KRM ++ + P +
Sbjct: 404 RRGIWRWGVRLLDKMQQKGLKPGSREWNAVLLACSRAAETSAAVDIFKRMIDQ-GLTPDV 462
Query: 138 RTYDPALFCFCENLEAQKAYEE-----------------QEITALLKVSAGTGRVEKVYQ 180
+Y L LE K Y+E T L+ + G G V
Sbjct: 463 VSYGALL----SALEKGKLYDEALRVWEHMCKVGVKPNLHAYTILVSIYIGKGNHAMVDS 518
Query: 181 YLQ-----KLRSTV--------RCVNEETGKIIEDWFSGQKVNGV 212
L+ K+ TV CV G +WF KV +
Sbjct: 519 VLRGMLSAKIEPTVVTFNAIISACVRNNKGGSAFEWFHRMKVQNI 563
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.130 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,392,926,068
Number of Sequences: 23463169
Number of extensions: 173835986
Number of successful extensions: 475235
Number of sequences better than 100.0: 299
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 209
Number of HSP's that attempted gapping in prelim test: 474490
Number of HSP's gapped (non-prelim): 646
length of query: 295
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 154
effective length of database: 9,050,888,538
effective search space: 1393836834852
effective search space used: 1393836834852
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)