BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048766
(525 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FGL1|PP423_ARATH Putative pentatricopeptide repeat-containing protein At5g47460
OS=Arabidopsis thaliana GN=PCMP-E103 PE=3 SV=1
Length = 576
Score = 576 bits (1484), Expect = e-163, Method: Compositional matrix adjust.
Identities = 274/517 (52%), Positives = 374/517 (72%), Gaps = 5/517 (0%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ L HLLR S + G+ + C+QLH Y+ K GF+SN +S +LM FY+ +SL DAHK+
Sbjct: 53 PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F E+P P V+SWNSL+SGYVQSG++++ + LF+EL RS+++ + +SFT+ALAAC +L
Sbjct: 113 FDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLS 172
Query: 121 QLGMAIHSKIVKYSLERG-VVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAA 179
LG IHSK+VK LE+G VV+ NCLIDMYGKCG ++DA+ VF M +KD +SWN+++A+
Sbjct: 173 PLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVAS 232
Query: 180 SARNGNLELAFGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSIL 239
+RNG LEL F H++PNPDT++YNE+I+ + GD +A +LS MP+PNSSSWN+IL
Sbjct: 233 CSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTIL 292
Query: 240 TGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLD 299
TGYVN + EA F +M S V DEY+ S +L+ +A L+ + WG LIH+C K GLD
Sbjct: 293 TGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLD 352
Query: 300 ASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQL 359
+ +VVASAL+DMYSKCG ++ A+ MF ++ RKNL+ WN MI+GYARNGD + I+LF QL
Sbjct: 353 SRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQL 412
Query: 360 KTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQK 419
K R L+PD TFLN+LA CSH ++P + + YFE M +Y IKP+VEHCCS+IR MGQ+
Sbjct: 413 KQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQR 472
Query: 420 GEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSD---YVYV 476
GEVW+A+++I+E GFG GV WRALL A A DL A+ AA++I+L GD+D Y+Y+
Sbjct: 473 GEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIEL-GDADKDEYLYI 531
Query: 477 MLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIE 513
++ NLY H W +R MRE G+ KE G SWI+
Sbjct: 532 VMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 124/300 (41%), Gaps = 18/300 (6%)
Query: 71 SWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKI 130
SW++++ + G L VEL DA L G G + L +H +
Sbjct: 23 SWSTIVPALARFGSI-GVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 131 VKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELA- 189
K+ ++N L+ Y S+EDA VF EM D D+ISWNS+++ ++G +
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 190 --FGFLHRLP-NPDTISYNEVINGIAQ-----FGDIEDAIMILSSMPSPNSSSWNSILTG 241
F LHR P+ S+ + A+ G + ++ + N N ++
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 242 YVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDAS 301
Y + +A+ +F M+ KD +++ +++ + L G+ Q +
Sbjct: 202 YGKCGFMDDAVLVFQHMEEKDT----VSWNAIVASCSRNGKLELGLWF----FHQMPNPD 253
Query: 302 IVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKT 361
V + L+D + K G A + + N +WN ++TGY + + E F ++ +
Sbjct: 254 TVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHS 313
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 302 bits (773), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 286/516 (55%), Gaps = 34/516 (6%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
PN+Y L++A++++ + Q LH +KS S+VFV+ +L+ Y L A K+
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F I + VVSWNS+I+G+VQ G KAL LF ++E ++ A + L+AC ++ +L
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNL 248
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
+ G + S I + + + +AN ++DMY KCGS+EDA +F M +KD ++W +++
Sbjct: 249 EFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML--- 305
Query: 181 ARNGNLELAFGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILT 240
+G A D E A +L+SMP + +WN++++
Sbjct: 306 ----------------------------DGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 241 GYVNRNRVPEALHLFGEMQ-SKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLD 299
Y + EAL +F E+Q K++ +++ T + LS A + AL G IHS + K G+
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 300 ASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQL 359
+ V SAL+ MYSKCG +E + +F S+ ++++ W+AMI G A +G + +++F ++
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 360 KTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQK 419
+ +++P+ VTF NV ACSHT + D+ F M +YGI P +H ++ ++G+
Sbjct: 458 QEA-NVKPNGVTFTNVFCACSHTGL-VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRS 515
Query: 420 GEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLC 479
G + +A + I + VW ALL A ++L++A ++ +++LE +D +V+L
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 480 NLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVE 515
N+Y G W+ S +R MR GL+KE GCS IE++
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEID 611
Score = 32.7 bits (73), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 284 TWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGY 343
T G +I + AS + A A L ++ +E A +F + + N WN +I Y
Sbjct: 49 THGHMIRTGTFSDPYSASKLFAMAALSSFA---SLEYARKVFDEIPKPNSFAWNTLIRAY 105
Query: 344 ARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACS 380
A D I F + + P+ TF ++ A +
Sbjct: 106 ASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 291 bits (745), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 163/521 (31%), Positives = 279/521 (53%), Gaps = 40/521 (7%)
Query: 2 NEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMF 61
NEY +L A S L Q+H I KS FLS+V++ +AL+ Y K ++ DA ++F
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210
Query: 62 VEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQ 121
E+ +VVSWNSLI+ + Q+G +AL++F + S + D + S ++AC L +++
Sbjct: 211 DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270
Query: 122 LGMAIHSKIVKY-SLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
+G +H ++VK L ++++N +DMY KC +++A +F M +++I+ S+I+
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS-- 328
Query: 181 ARNGNLELAFGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILT 240
G A + A ++ + M N SWN+++
Sbjct: 329 -----------------------------GYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 241 GYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGL-- 298
GY EAL LF ++ + V Y+F+ +L A L+ L GM H V+K G
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 299 ----DASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIE 354
+ I V ++L+DMY KCG VE +FR + ++ V+WNAMI G+A+NG + +E
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 355 LFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIR 414
LF ++ + +PD +T + VL+AC H ++ YF SMT+D+G+ P +H M+
Sbjct: 480 LFREMLESGE-KPDHITMIGVLSACGHAGF-VEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 415 LMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYV 474
L+G+ G + A+ MI E+ V+W +LL+A ++ + + A +++++E +
Sbjct: 538 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP 597
Query: 475 YVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVE 515
YV+L N+Y G W+ +R MR+ G+ K+ GCSWI+++
Sbjct: 598 YVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 638
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 151/282 (53%), Gaps = 35/282 (12%)
Query: 101 YADAYSFTSALAAC--GQLGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDA 158
+ D+ F L +C +L ++ + +H+ ++K + I N LID Y KCGS+ED
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRY-VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDG 74
Query: 159 IGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPNPDTISYNEVINGIAQFGDIE 218
VF ++P + ++N V+ G+ + G ++
Sbjct: 75 RQVFD-------------------------------KMPQRNIYTWNSVVTGLTKLGFLD 103
Query: 219 DAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIA 278
+A + SMP + +WNS+++G+ +R EAL F M + ++EY+F+++LS +
Sbjct: 104 EADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACS 163
Query: 279 GLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNA 338
GL+ + G+ +HS + K + + + SAL+DMYSKCG V A +F + +N+V+WN+
Sbjct: 164 GLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNS 223
Query: 339 MITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACS 380
+IT + +NG + +++F+ + R ++PD VT +V++AC+
Sbjct: 224 LITCFEQNGPAVEALDVFQMMLESR-VEPDEVTLASVISACA 264
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 21/243 (8%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFL------SNVFVSTALMGFYRKINSL 54
P Y ++L+A +DL Q H ++LK GF ++FV +L+ Y K +
Sbjct: 384 PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCV 443
Query: 55 ADAHKMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAAC 114
+ + +F ++ + VSWN++I G+ Q+G +AL LF E+ S D + L+AC
Sbjct: 444 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSAC 503
Query: 115 GQLGSLQLGMAIHSKIVKYSLERGVVIA------NCLIDMYGKCGSVEDAIGVFGEM-ID 167
G G ++ G S S+ R +A C++D+ G+ G +E+A + EM +
Sbjct: 504 GHAGFVEEGRHYFS-----SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 558
Query: 168 KDIISWNSVIAASARNGNLELAFGFLHRL---PNPDTISYNEVINGIAQFGDIEDAIMIL 224
D + W S++AA + N+ L +L ++ Y + N A+ G ED + +
Sbjct: 559 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 618
Query: 225 SSM 227
SM
Sbjct: 619 KSM 621
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 288 bits (738), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 177/546 (32%), Positives = 278/546 (50%), Gaps = 47/546 (8%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
+QLH +ILKSGF V +L+ FY K + A K+F E+ + V+SWNS+I+GYV +
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 83 GKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIA 142
G K L++FV++ S I D + S A C + LG A+HS VK R
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 143 NCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLP----N 198
N L+DMY KCG ++ A VF EM D+ ++S+ S+IA AR G A + +
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 199 PDTISYNEVINGIAQF-----------------------------------GDIEDAIMI 223
PD + V+N A++ G +++A ++
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 224 LSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEM-QSKDVPMDEYTFSTMLSGIAGLSA 282
S M + SWN+I+ GY EAL LF + + K DE T + +L A LSA
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 283 LTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITG 342
G IH +++ G + VA++L+DMY+KCG + +A +F + K+LV+W MI G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574
Query: 343 YARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGI 402
Y +G + I LF Q++ ++ D ++F+++L ACSH+ + D+ +F M + I
Sbjct: 575 YGMHGFGKEAIALFNQMRQA-GIEADEISFVSLLYACSHSGL-VDEGWRFFNIMRHECKI 632
Query: 403 KPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAA 462
+PTVEH ++ ++ + G++ +A R I + +W ALL D+ +A A
Sbjct: 633 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 692
Query: 463 EVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVEN-----V 517
+V +LE ++ YV++ N+Y W+ +R + +RGLRK GCSWIE++ V
Sbjct: 693 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFV 752
Query: 518 AAHSSN 523
A SSN
Sbjct: 753 AGDSSN 758
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 187/408 (45%), Gaps = 40/408 (9%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
+++ +I +GF+ + + + L Y L +A ++F E+ + WN L++ +S
Sbjct: 114 KEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKS 173
Query: 83 GKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIA 142
G + ++ LF ++ S + D+Y+F+ + L S+ G +H I+K +
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG 233
Query: 143 NCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFG-FLHRL----- 196
N L+ Y K V+ A VF EM ++D+ISWNS+I NG E F+ L
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 197 -------------PNPDTISYNEVINGI--------------------AQFGDIEDAIMI 223
+ IS ++ I ++ GD++ A +
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 224 LSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSAL 283
M + S+ S++ GY EA+ LF EM+ + + D YT + +L+ A L
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 284 TWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGY 343
G +H + + L I V++AL+DMY+KCG ++ A+ +F + K++++WN +I GY
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 473
Query: 344 ARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSE 391
++N + + LF L + PD T VL AC+ FDK E
Sbjct: 474 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS-AFDKGRE 520
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 155/353 (43%), Gaps = 42/353 (11%)
Query: 68 SVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIH 127
SV N+ + + +SG A+ L + +I D + S L C SL+ G +
Sbjct: 60 SVTDANTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVD 117
Query: 128 SKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLE 187
+ I + + L MY CG +++A VF E+ + + WN ++ A++G+
Sbjct: 118 NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFS 177
Query: 188 LAFGFLHRLPNP----DTISY-------------------------------NEVINGIA 212
+ G ++ + D+ ++ N V N +
Sbjct: 178 GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLV 237
Query: 213 QF----GDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEY 268
F ++ A + M + SWNSI+ GYV+ + L +F +M + +D
Sbjct: 238 AFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLA 297
Query: 269 TFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSL 328
T ++ +G A ++ G +HS +K + LLDMYSKCG ++ A ++FR +
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 357
Query: 329 CRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSH 381
+++V++ +MI GYAR G + ++LFE+++ + PD T VL C+
Sbjct: 358 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE-EGISPDVYTVTAVLNCCAR 409
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+E + +L A + L +++H YI+++G+ S+ V+ +L+ Y K +L AH +
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 556
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F +I +VSW +I+GY G ++A+ LF ++ ++ I AD SF S L AC G +
Sbjct: 557 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 616
Query: 121 QLGMAIHSKIVKY--SLERGVVIANCLIDMYGKCGSVEDAIGVFGEM-IDKDIISWNSVI 177
G + I+++ +E V C++DM + G + A M I D W +++
Sbjct: 617 DEGWRFFN-IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 675
Query: 178 AASARNGNLELA 189
+ +++LA
Sbjct: 676 CGCRIHHDVKLA 687
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 281 bits (720), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 167/553 (30%), Positives = 285/553 (51%), Gaps = 45/553 (8%)
Query: 2 NEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMF 61
N +V L+ L C LH I+K G+ SN FV AL+ Y S+ A +F
Sbjct: 145 NPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVF 204
Query: 62 VEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQ 121
I +V W ++S YV++G + +L L + + + Y+F +AL A LG+
Sbjct: 205 EGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFD 264
Query: 122 LGMAIHSKIVK--YSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAA 179
+H +I+K Y L+ V + L+ +Y + G + DA VF EM D++ W+ +IA
Sbjct: 265 FAKGVHGQILKTCYVLDPRVGVG--LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 180 SARNGNLELAFGFLHRL------PNPDTISY----------------------------- 204
+NG A R+ PN T+S
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 205 ----NEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQS 260
N +I+ A+ ++ A+ + + + S N SWN+++ GY N +A +F E
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 261 KDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEI 320
V + E TFS+ L A L+++ G+ +H IK + V+++L+DMY+KCG ++
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 321 ADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACS 380
A S+F + ++ +WNA+I+GY+ +G + + + + +K RD +P+ +TFL VL+ CS
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD-RDCKPNGLTFLGVLSGCS 561
Query: 381 HTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVV 440
+ + D+ E FESM +D+GI+P +EH M+RL+G+ G++ +A ++I + + ++
Sbjct: 562 NAGL-IDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMI 620
Query: 441 WRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRE 500
WRA+LSAS ++ + AR SA E++K+ + YV++ N+Y W + +R M+E
Sbjct: 621 WRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKE 680
Query: 501 RGLRKEAGCSWIE 513
G++KE G SWIE
Sbjct: 681 MGVKKEPGLSWIE 693
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 206/465 (44%), Gaps = 49/465 (10%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
+ +HC ILK G ++F + L+ Y K DA +F E+P+ + VS+ +L GY
Sbjct: 69 KAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA-- 126
Query: 83 GKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIA 142
+ + L+ L R + + FTS L L ++ +HS IVK + +
Sbjct: 127 --CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVG 184
Query: 143 NCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLH--RLPN-- 198
LI+ Y CGSV+ A VF ++ KDI+ W +++ NG E + L R+
Sbjct: 185 AALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFM 244
Query: 199 PDTISYNEVING-----------------------------------IAQFGDIEDAIMI 223
P+ +++ + Q GD+ DA +
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKV 304
Query: 224 LSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSAL 283
+ MP + W+ ++ + EA+ LF M+ V +E+T S++L+G A
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCS 364
Query: 284 TWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGY 343
G +H V+K G D I V++AL+D+Y+KC +++ A +F L KN V+WN +I GY
Sbjct: 365 GLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY 424
Query: 344 ARNGDLTKVIELF-EQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGI 402
G+ K +F E L+ + VTF + L AC+ V + ++ +
Sbjct: 425 ENLGEGGKAFSMFREALRN--QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482
Query: 403 KPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSA 447
K V + S+I + + G++ AQ + E+ W AL+S
Sbjct: 483 KVAVSN--SLIDMYAKCGDIKFAQSVFNEMETIDVA-SWNALISG 524
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 181/383 (47%), Gaps = 41/383 (10%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
PN Y L+AS LG + + +H ILK+ ++ + V L+ Y ++ ++DA K+
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKV 304
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F E+P+ VV W+ +I+ + Q+G +A++LF+ + + + + ++ +S L C
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCS 364
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
LG +H +VK + + ++N LID+Y KC ++ A+ +F E+ K+ +SWN+VI
Sbjct: 365 GLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY 424
Query: 181 ARNGNLELAFG-FLHRLPNPDTISY----------------------------------- 204
G AF F L N +++
Sbjct: 425 ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKV 484
Query: 205 ---NEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSK 261
N +I+ A+ GDI+ A + + M + + +SWN++++GY +AL + M+ +
Sbjct: 485 AVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDR 544
Query: 262 DVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIK-QGLDASIVVASALLDMYSKCGQVEI 320
D + TF +LSG + + G +I+ G++ + + ++ + + GQ++
Sbjct: 545 DCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDK 604
Query: 321 ADSMFRSLC-RKNLVTWNAMITG 342
A + + +++ W AM++
Sbjct: 605 AMKLIEGIPYEPSVMIWRAMLSA 627
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 131/314 (41%), Gaps = 38/314 (12%)
Query: 103 DAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVF 162
D++++ + L C Q AIH I+K + N L++ Y K G +DA+ +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 163 GEMIDKDIISWNSVIAASARNGNLELAFGFLHRLP---NPDTIS---------------- 203
EM +++ +S+ ++ A + L + LHR NP +
Sbjct: 108 DEMPERNNVSFVTLAQGYACQDPIGL-YSRLHREGHELNPHVFTSFLKLFVSLDKAEICP 166
Query: 204 ----------YNE-------VINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRN 246
Y+ +IN + G ++ A + + + W I++ YV
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 247 RVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVAS 306
++L L M+ + YTF T L GL A + +H ++K V
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 307 ALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQ 366
LL +Y++ G + A +F + + ++V W+ MI + +NG + ++LF +++ +
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF-VV 345
Query: 367 PDSVTFLNVLAACS 380
P+ T ++L C+
Sbjct: 346 PNEFTLSSILNGCA 359
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 281 bits (719), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 162/555 (29%), Positives = 277/555 (49%), Gaps = 41/555 (7%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ L L+ A S G QQLH Y K GF SN + AL+ Y K + A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F+E +VV WN ++ Y R + +F +++ EI + Y++ S L C +LG L
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
+LG IHS+I+K + + + + LIDMY K G ++ A + KD++SW ++IA
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 181 ARNG-------------------------NLELAFGFLHRLPNPDTISYNEVINGIA--- 212
+ N A L L I ++G +
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 213 -----------QFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSK 261
+ G IE++ + + ++ +WN++++G+ EAL +F M +
Sbjct: 627 PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE 686
Query: 262 DVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIA 321
+ + +TF + + + + + G +H+ + K G D+ V +AL+ MY+KCG + A
Sbjct: 687 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA 746
Query: 322 DSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSH 381
+ F + KN V+WNA+I Y+++G ++ ++ F+Q+ +++P+ VT + VL+ACSH
Sbjct: 747 EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM-IHSNVRPNHVTLVGVLSACSH 805
Query: 382 TDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVW 441
+ DK YFESM +YG+ P EH ++ ++ + G + RA+ I+E+ +VW
Sbjct: 806 IGL-VDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVW 864
Query: 442 RALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRER 501
R LLSA ++++ +A +++LE + YV+L NLY WD + R M+E+
Sbjct: 865 RTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEK 924
Query: 502 GLRKEAGCSWIEVEN 516
G++KE G SWIEV+N
Sbjct: 925 GVKKEPGQSWIEVKN 939
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 213/486 (43%), Gaps = 43/486 (8%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P Y +L A + +QLH +LK GF S+ +V AL+ Y + +L A +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F + Q V++N+LI+G Q G KA+ LF + + D+ + S + AC G+L
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
G +H+ K I L+++Y KC +E A+ F E ++++ WN ++ A
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 465
Query: 181 ARNGNLELAFGFLHRLP----NPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSS--- 233
+L +F ++ P+ +Y ++ + GD+E I S + N
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 234 --------------------------------SWNSILTGYVNRNRVPEALHLFGEMQSK 261
SW +++ GY N +AL F +M +
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 262 DVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIA 321
+ DE + +S AGL AL G IH+ G + + +AL+ +YS+CG++E +
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 322 DSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSH 381
F + + WNA+++G+ ++G+ + + +F ++ + ++ TF + + A S
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR-EGIDNNNFTFGSAVKAASE 704
Query: 382 TDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVW 441
T K + ++ G E C ++I + + G + A++ E+ + V W
Sbjct: 705 T--ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKN-EVSW 761
Query: 442 RALLSA 447
A+++A
Sbjct: 762 NAIINA 767
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 190/421 (45%), Gaps = 43/421 (10%)
Query: 1 PNEYVLFHLLRA--SSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAH 58
PNE +L A + +D +Q+H IL G + V L+ Y + + A
Sbjct: 184 PNEGTFSGVLEACRGGSVAFDV-VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLAR 242
Query: 59 KMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLG 118
++F + SW ++ISG ++ +A+ LF ++ I Y+F+S L+AC ++
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 119 SLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIA 178
SL++G +H ++K + N L+ +Y G++ A +F M +D +++N++I
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 179 ASARNGNLELAFGFLHRL------PNPDTI-----------------------------S 203
++ G E A R+ P+ +T+ S
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 204 YNEV----INGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQ 259
N++ +N A+ DIE A+ N WN +L Y + + + +F +MQ
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 260 SKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVE 319
+++ ++YT+ ++L L L G IHS +IK + V S L+DMY+K G+++
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 320 IADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAAC 379
A + K++V+W MI GY + K + F Q+ R ++ D V N ++AC
Sbjct: 543 TAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD-RGIRSDEVGLTNAVSAC 601
Query: 380 S 380
+
Sbjct: 602 A 602
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 176/397 (44%), Gaps = 41/397 (10%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
++LH ILK G SN +S L FY L A K+F E+P+ ++ +WN +I
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASR 164
Query: 83 GKYRKALNLFVELERSEIYADAYSFTSALAAC-GQLGSLQLGMAIHSKIVKYSLERGVVI 141
+ LFV + + + +F+ L AC G + + IH++I+ L V+
Sbjct: 165 NLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVV 224
Query: 142 ANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARN----------------GN 185
N LID+Y + G V+ A VF + KD SW ++I+ ++N G
Sbjct: 225 CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGI 284
Query: 186 LELAFGF------------------LHRLP-----NPDTISYNEVINGIAQFGDIEDAIM 222
+ + F LH L + DT N +++ G++ A
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 223 ILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSA 282
I S+M ++ ++N+++ G +A+ LF M + D T ++++ +
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 283 LTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITG 342
L G +H+ K G ++ + ALL++Y+KC +E A F +N+V WN M+
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 343 YARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAAC 379
Y DL +F Q++ + ++ P+ T+ ++L C
Sbjct: 465 YGLLDDLRNSFRIFRQMQ-IEEIVPNQYTYPSILKTC 500
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 162/383 (42%), Gaps = 81/383 (21%)
Query: 118 GSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVI 177
GSL G +HS+I+K L+ ++ L D Y G + A VF EM ++ I +WN +I
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 178 AASARNGNLELAFGFLHRL------PNPDTIS---------------------------- 203
A + FG R+ PN T S
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 204 ------YNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGE 257
N +I+ ++ G ++ A + + + SSW ++++G EA+ LF +
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 258 MQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQ 317
M + Y FS++LS + +L G +H V+K G + V +AL+ +Y G
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 318 VEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLA 377
+ A+ +F ++ +++ VT+N +I G ++ G K +ELF+++ + L+PDS T +++
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH-LDGLEPDSNTLASLVV 397
Query: 378 ACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRM---IRELGF 434
ACS G ++R Q++ +LGF
Sbjct: 398 ACS-------------------------------------ADGTLFRGQQLHAYTTKLGF 420
Query: 435 GSYGVVWRALLSASGACSDLDVA 457
S + ALL+ C+D++ A
Sbjct: 421 ASNNKIEGALLNLYAKCADIETA 443
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 281 bits (719), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/553 (29%), Positives = 287/553 (51%), Gaps = 39/553 (7%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
PN + L ++ G Q+H ++K+G + VS +L+ Y K ++ A +
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F + SVV+WNS+ISGY +G +AL +F + + + SF S + C L L
Sbjct: 252 FDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKEL 311
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEM-IDKDIISWNSVIAA 179
+ +H +VKY I L+ Y KC ++ DA+ +F E+ +++SW ++I+
Sbjct: 312 RFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
Query: 180 SARNGNLELAFGFLHRL------PNPDT----------ISYNEV---------------- 207
+N E A + PN T IS +EV
Sbjct: 372 FLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVG 431
Query: 208 ---INGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVP 264
++ + G +E+A + S + + +W+++L GY A+ +FGE+ +
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 491
Query: 265 MDEYTFSTMLSGIAGLSA-LTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADS 323
+E+TFS++L+ A +A + G H IK LD+S+ V+SALL MY+K G +E A+
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 551
Query: 324 MFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTD 383
+F+ K+LV+WN+MI+GYA++G K +++F+++K R ++ D VTF+ V AAC+H
Sbjct: 552 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKK-RKVKMDGVTFIGVFAACTHAG 610
Query: 384 IPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRA 443
+ ++ +YF+ M +D I PT EH M+ L + G++ +A ++I + + +WR
Sbjct: 611 L-VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRT 669
Query: 444 LLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGL 503
+L+A ++ R++A ++I ++ + YV+L N+Y G+W + +R M ER +
Sbjct: 670 ILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNV 729
Query: 504 RKEAGCSWIEVEN 516
+KE G SWIEV+N
Sbjct: 730 KKEPGYSWIEVKN 742
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/509 (27%), Positives = 260/509 (51%), Gaps = 59/509 (11%)
Query: 9 LLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPS 68
+L+ S+ L + + +QLHC +K GFL +V V T+L+ Y K ++ D K+F E+ + +
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN 158
Query: 69 VVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHS 128
VV+W +LISGY ++ + L LF+ ++ ++++F +AL + G G+ +H+
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 218
Query: 129 KIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNG-NLE 187
+VK L++ + ++N LI++Y KCG+V A +F + K +++WNS+I+ A NG +LE
Sbjct: 219 VVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLE 278
Query: 188 LAFGFLHRL-------------------PNPDTISYNEVIN-GIAQFG-----DIEDAIM 222
A G + + N + + E ++ + ++G +I A+M
Sbjct: 279 -ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 223 ILSSMPSP---------------NSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDE 267
+ S + N SW ++++G++ + EA+ LF EM+ K V +E
Sbjct: 338 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNE 397
Query: 268 YTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRS 327
+T+S +L+ + +S +H+ V+K + S V +ALLD Y K G+VE A +F
Sbjct: 398 FTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 453
Query: 328 LCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFD 387
+ K++V W+AM+ GYA+ G+ I++F +L T ++P+ TF ++L C+ T+
Sbjct: 454 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL-TKGGIKPNEFTFSSILNVCAATNASMG 512
Query: 388 KVSEYFESMTKDYGIKPTVEH--CCS--MIRLMGQKGEVWRAQRMI---RELGFGSYGVV 440
+ ++ + IK ++ C S ++ + +KG + A+ + RE S+ +
Sbjct: 513 QGKQF-----HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 567
Query: 441 WRALLSASGACSDLDVARISAAEVIKLEG 469
A LDV + +K++G
Sbjct: 568 ISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 171/365 (46%), Gaps = 41/365 (11%)
Query: 54 LADAHKMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAA 113
L +AH +F + P S+ SL+ G+ + G+ ++A LF+ + R + D F+S L
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 114 CGQLGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISW 173
L G +H + +K+ V + L+D Y K + +D VF EM ++++++W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 174 NSVIAASARNGNLELAFGFLHRLPN----PDTISY------------------------- 204
++I+ ARN + R+ N P++ ++
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 205 ----------NEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHL 254
N +IN + G++ A ++ + +WNS+++GY EAL +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 255 FGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSK 314
F M+ V + E +F++++ A L L + +H V+K G + +AL+ YSK
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342
Query: 315 CGQVEIADSMFRSL-CRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFL 373
C + A +F+ + C N+V+W AMI+G+ +N + ++LF ++K + ++P+ T+
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR-KGVRPNEFTYS 401
Query: 374 NVLAA 378
+L A
Sbjct: 402 VILTA 406
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 14/252 (5%)
Query: 209 NGIAQ-----FGDIE-----DAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEM 258
NG+AQ FG + +A + P + S+ S+L G+ R EA LF +
Sbjct: 25 NGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNI 84
Query: 259 QSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQV 318
+ MD FS++L A L +G +H IK G + V ++L+D Y K
Sbjct: 85 HRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNF 144
Query: 319 EIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAA 378
+ +F + +N+VTW +I+GYARN +V+ LF +++ QP+S TF L
Sbjct: 145 KDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQN-EGTQPNSFTFAAALGV 203
Query: 379 CSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYG 438
+ + + + ++ G+ T+ S+I L + G V +A+ + + S
Sbjct: 204 LAEEGVGGRGLQVH--TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV- 260
Query: 439 VVWRALLSASGA 450
V W +++S A
Sbjct: 261 VTWNSMISGYAA 272
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 167/530 (31%), Positives = 281/530 (53%), Gaps = 39/530 (7%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
+++H ++K GF+S+V+V +L+ Y K+ DA K+F E+P+ +VSWNS+ISGY+
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLAL 209
Query: 83 GKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERG-VVI 141
G +L LF E+ + D +S SAL AC + S ++G IH V+ +E G V++
Sbjct: 210 GDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMV 269
Query: 142 ANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLP---- 197
++DMY K G V A +F MI ++I++WN +I ARNG + AF ++
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329
Query: 198 -NPDTIS-----------YNEVINGIA--------------------QFGDIEDAIMILS 225
PD I+ I+G A + G ++ A +I
Sbjct: 330 LQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFD 389
Query: 226 SMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTW 285
M N SWNSI+ YV + AL LF E+ + D T +++L A +L+
Sbjct: 390 RMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSE 449
Query: 286 GMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYAR 345
G IH+ ++K ++ ++ ++L+ MY+ CG +E A F + K++V+WN++I YA
Sbjct: 450 GREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAV 509
Query: 346 NGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPT 405
+G + LF ++ R + P+ TF ++LAACS + + D+ EYFESM ++YGI P
Sbjct: 510 HGFGRISVWLFSEMIASR-VNPNKSTFASLLAACSISGM-VDEGWEYFESMKREYGIDPG 567
Query: 406 VEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAAEVI 465
+EH M+ L+G+ G A+R + E+ F +W +LL+AS D+ +A +A ++
Sbjct: 568 IEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIF 627
Query: 466 KLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVE 515
K+E D+ YV+L N+Y G W+ + ++ M +G+ + + S +E +
Sbjct: 628 KMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAK 677
Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 181/385 (47%), Gaps = 57/385 (14%)
Query: 40 VSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSE 99
++ AL GF + DA ++F E+ + WN +I G+ G Y +A+ + + +
Sbjct: 67 LTRALRGFADS-RLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG 125
Query: 100 IYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAI 159
+ AD +++ + + + SL+ G IH+ ++K V + N LI +Y K G DA
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE 185
Query: 160 GVFGEMIDKDIISWNSVIAASARNGNLELAFGF--------------------------- 192
VF EM ++DI+SWNS+I+ G L L GF
Sbjct: 186 KVFEEMPERDIVSWNSMIS-----GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGA 240
Query: 193 ------------LH------RLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSS 234
+H R+ D + +++ +++G++ A I + M N +
Sbjct: 241 CSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVA 300
Query: 235 WNSILTGYVNRNRVPEALHLFGEMQSKD-VPMDEYTFSTMLSGIAGLSALTWGMLIHSCV 293
WN ++ Y RV +A F +M ++ + D T +L SA+ G IH
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYA 356
Query: 294 IKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVI 353
+++G +V+ +AL+DMY +CGQ++ A+ +F + KN+++WN++I Y +NG +
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 354 ELFEQLKTVRDLQPDSVTFLNVLAA 378
ELF++L L PDS T ++L A
Sbjct: 417 ELFQELWD-SSLVPDSTTIASILPA 440
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 103/184 (55%), Gaps = 4/184 (2%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ +LL AS+ L T +H Y ++ GFL ++ + TAL+ Y + L A +
Sbjct: 332 PDVITSINLLPASAILEGRT----IHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVI 387
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F + + +V+SWNS+I+ YVQ+GK AL LF EL S + D+ + S L A + SL
Sbjct: 388 FDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSL 447
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
G IH+ IVK +I N L+ MY CG +EDA F ++ KD++SWNS+I A
Sbjct: 448 SEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAY 507
Query: 181 ARNG 184
A +G
Sbjct: 508 AVHG 511
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 14/217 (6%)
Query: 182 RNGNLELAF----GFLHRLPNPDTISYNEVIN---------GIAQFGDIEDAIMILSSMP 228
RNGN L F RL D + +N G A +EDA+ + M
Sbjct: 32 RNGNRNLEFDSGISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMN 91
Query: 229 SPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGML 288
++ WN ++ G+ + EA+ + M V D +T+ ++ +AG+S+L G
Sbjct: 92 KADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKK 151
Query: 289 IHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGD 348
IH+ VIK G + + V ++L+ +Y K G A+ +F + +++V+WN+MI+GY GD
Sbjct: 152 IHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGD 211
Query: 349 LTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIP 385
+ LF+++ +PD + ++ L ACSH P
Sbjct: 212 GFSSLMLFKEMLKC-GFKPDRFSTMSALGACSHVYSP 247
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 279 bits (714), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 174/563 (30%), Positives = 298/563 (52%), Gaps = 56/563 (9%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSG-FLSNVFVSTALMG-FYRKINSLADAH 58
PN+Y ++RA S+ + + +++K+G F S+V V +L+ F + NS +A+
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 59 KMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLG 118
K+F ++ + +VV+W +I+ +Q G R+A+ F+++ S +D ++ +S +AC +L
Sbjct: 224 KVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELE 283
Query: 119 SLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKC---GSVEDAIGVFGEMIDKDIISWNS 175
+L LG +HS ++ L V + L+DMY KC GSV+D VF M D ++SW +
Sbjct: 284 NLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTA 341
Query: 176 VIAASARNGNLELAFGFL--------HRLPNPDTIS------------------------ 203
+I +N NL L H PN T S
Sbjct: 342 LITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK 401
Query: 204 ---------YNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHL 254
N VI+ + +EDA S+ N S+N+ L G +A L
Sbjct: 402 RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKL 461
Query: 255 FGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSK 314
E+ +++ + +TF+++LSG+A + ++ G IHS V+K GL + V +AL+ MYSK
Sbjct: 462 LSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSK 521
Query: 315 CGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLN 374
CG ++ A +F + +N+++W +MITG+A++G +V+E F Q+ ++P+ VT++
Sbjct: 522 CGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQM-IEEGVKPNEVTYVA 580
Query: 375 VLAACSHTDIPFDKVSE---YFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRE 431
+L+ACSH + VSE +F SM +D+ IKP +EH M+ L+ + G + A I
Sbjct: 581 ILSACSHVGL----VSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINT 636
Query: 432 LGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVA 491
+ F + +VWR L A S+ ++ +++A ++++L+ + Y+ L N+Y G W+ +
Sbjct: 637 MPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEES 696
Query: 492 SVMRNFMRERGLRKEAGCSWIEV 514
+ MR M+ER L KE GCSWIEV
Sbjct: 697 TEMRRKMKERNLVKEGGCSWIEV 719
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 130/551 (23%), Positives = 226/551 (41%), Gaps = 102/551 (18%)
Query: 66 QPSVVSW----NSLISGYVQSGKYRKALNLFVELERSEIYA-DAYSFTSALAACGQLGSL 120
QPSV + + LI ++ +G R A++ + R I D+ +F+S L +C +
Sbjct: 19 QPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDF 78
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMI---DKDIISWNSVI 177
+LG +H++++++ +E V+ N LI +Y K G A VF M +D++SW++++
Sbjct: 79 RLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMM 138
Query: 178 AASARNGN----LELAFGFLHRLPNPDTISYNEVIN--------GIAQF----------- 214
A NG +++ FL P+ Y VI G+ +
Sbjct: 139 ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF 198
Query: 215 ------------------GDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFG 256
E+A + M N +W ++T + EA+ F
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFL 258
Query: 257 EMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKC- 315
+M D++T S++ S A L L+ G +HS I+ GL V +L+DMY+KC
Sbjct: 259 DMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCS 316
Query: 316 --GQVEIADSMFRSLCRKNLVTWNAMITGYARNGDL-TKVIELFEQLKTVRDLQPDSVTF 372
G V+ +F + ++++W A+ITGY +N +L T+ I LF ++ T ++P+ TF
Sbjct: 317 ADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTF 376
Query: 373 LNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMI--- 429
+ AC + P +V + G+ S+I + + + AQR
Sbjct: 377 SSAFKACGNLSDP--RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434
Query: 430 ---------------------------------RELGFGSYGVVWRALLSASGACSDLDV 456
RELG ++ + +LLS +
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAF--TFASLLSGVANVGSIRK 492
Query: 457 ARISAAEVIKLEGDSDY-VYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIE-V 514
++V+KL + V L ++Y+ G+ D AS + NFM R + SW +
Sbjct: 493 GEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV-----ISWTSMI 547
Query: 515 ENVAAHSSNIR 525
A H IR
Sbjct: 548 TGFAKHGFAIR 558
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 212/505 (41%), Gaps = 64/505 (12%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQL-HCYILKSGFLSNVFVSTALMGFYRKINSLADAHK 59
P + V F L S D +L H +++ + + +L+ Y K A A
Sbjct: 59 PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAED 118
Query: 60 MFVEIP---QPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQ 116
+F + + VVSW+++++ Y +G+ A+ +FVE + + Y +T+ + AC
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
Query: 117 LGSLQLGMAIHSKIVKYS-LERGVVIANCLIDMYGKC-GSVEDAIGVFGEMIDKDIISWN 174
+ +G ++K E V + LIDM+ K S E+A VF +M + ++++W
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238
Query: 175 SVIAASARNGNLELAFGFLHRLP----NPDTISYNEVINGIAQF---------------- 214
+I + G A F + D + + V + A+
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS 298
Query: 215 --------------------GDIEDAIMILSSMPSPNSSSWNSILTGYV-NRNRVPEALH 253
G ++D + M + SW +++TGY+ N N EA++
Sbjct: 299 GLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN 358
Query: 254 LFGEMQSK-DVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMY 312
LF EM ++ V + +TFS+ LS G + K+GL ++ VA++++ M+
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMF 418
Query: 313 SKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTF 372
K ++E A F SL KNLV++N + G RN + + +L ++ T R+L + TF
Sbjct: 419 VKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI-TERELGVSAFTF 477
Query: 373 LNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIREL 432
++L+ + ++ + E S G+ C ++I + + G + A R+ +
Sbjct: 478 ASLLSGVA--NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 433 -------------GFGSYGVVWRAL 444
GF +G R L
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVL 560
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 279 bits (713), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 163/557 (29%), Positives = 289/557 (51%), Gaps = 47/557 (8%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ Y+L +L A S L + +Q+H +IL+ G + + L+ Y K + AHK+
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKL 306
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F +P +++SW +L+SGY Q+ +++A+ LF + + + D Y+ +S L +C L +L
Sbjct: 307 FNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHAL 366
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
G +H+ +K +L + N LIDMY KC + DA VF D++ +N++I
Sbjct: 367 GFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGY 426
Query: 181 ARNGN-------LELAFGFLHRLPNPDTISYNEVINGIAQFGDI---------------- 217
+R G L + RL P +++ ++ A +
Sbjct: 427 SRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLN 486
Query: 218 -------------------EDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEM 258
+D+ ++ M + WNS+ GYV ++ EAL+LF E+
Sbjct: 487 LDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL 546
Query: 259 Q-SKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQ 317
Q S++ P DE+TF+ M++ L+++ G H ++K+GL+ + + +ALLDMY+KCG
Sbjct: 547 QLSRERP-DEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS 605
Query: 318 VEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLA 377
E A F S +++V WN++I+ YA +G+ K +++ E++ + ++P+ +TF+ VL+
Sbjct: 606 PEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS-EGIEPNYITFVGVLS 664
Query: 378 ACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSY 437
ACSH + D + + FE M + +GI+P EH M+ L+G+ G + +A+ +I ++
Sbjct: 665 ACSHAGLVEDGLKQ-FELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPA 722
Query: 438 GVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNF 497
+VWR+LLS ++++A +A I + + ML N+Y S G W A +R
Sbjct: 723 AIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRER 782
Query: 498 MRERGLRKEAGCSWIEV 514
M+ G+ KE G SWI +
Sbjct: 783 MKVEGVVKEPGRSWIGI 799
Score = 185 bits (469), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 212/424 (50%), Gaps = 49/424 (11%)
Query: 1 PNEYVLFHLLRASSDLG----WDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLAD 56
PNEY+L ++A S L W + QL +++KSGF +V+V T L+ FY K ++
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVF--QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDY 201
Query: 57 AHKMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQ 116
A +F +P+ S V+W ++ISG V+ G+ +L LF +L + D Y ++ L+AC
Sbjct: 202 ARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSI 261
Query: 117 LGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSV 176
L L+ G IH+ I++Y LE + N LID Y KCG V A +F M +K+IISW ++
Sbjct: 262 LPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTL 321
Query: 177 IAASARNG----NLEL-----AFGF----------------LHRLP-------------- 197
++ +N +EL FG LH L
Sbjct: 322 LSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL 381
Query: 198 NPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRN---RVPEALHL 254
D+ N +I+ A+ + DA + + + +N+++ GY + EAL++
Sbjct: 382 GNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNI 441
Query: 255 FGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSK 314
F +M+ + + TF ++L A L++L IH + K GL+ I SAL+D+YS
Sbjct: 442 FRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSN 501
Query: 315 CGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLN 374
C ++ + +F + K+LV WN+M GY + + + + LF +L+ R+ +PD TF N
Sbjct: 502 CYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE-RPDEFTFAN 560
Query: 375 VLAA 378
++ A
Sbjct: 561 MVTA 564
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 206/432 (47%), Gaps = 49/432 (11%)
Query: 3 EYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFV 62
E+ LRAS DL Y +H I+ G + ++S L+ Y + + A K+F
Sbjct: 46 EFARLLQLRASDDLL--HYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFE 103
Query: 63 EIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERS-EIYADAYSFTSALAACGQLGSLQ 121
++P+ ++VSW++++S G Y ++L +F+E R+ + + Y +S + AC L
Sbjct: 104 KMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRG 163
Query: 122 LGMA--IHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAA 179
M + S +VK +R V + LID Y K G+++ A VF + +K ++W ++I+
Sbjct: 164 RWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISG 223
Query: 180 SARNG----NLELAFGFLHRLPNPD--------------------------TISY----- 204
+ G +L+L + + PD + Y
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMD 283
Query: 205 ----NEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQS 260
N +I+ + G + A + + MP+ N SW ++L+GY EA+ LF M
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK 343
Query: 261 KDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEI 320
+ D Y S++L+ A L AL +G +H+ IK L V ++L+DMY+KC +
Sbjct: 344 FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403
Query: 321 ADSMFRSLCRKNLVTWNAMITGYARNG---DLTKVIELFEQLKTVRDLQPDSVTFLNVL- 376
A +F ++V +NAMI GY+R G +L + + +F ++ R ++P +TF+++L
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR-FRLIRPSLLTFVSLLR 462
Query: 377 AACSHTDIPFDK 388
A+ S T + K
Sbjct: 463 ASASLTSLGLSK 474
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 200 DTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEM- 258
DT N +IN ++ G + A + MP N SW+++++ + E+L +F E
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 259 -QSKDVPMDEYTFSTMLSGIAGLSALTWGML--IHSCVIKQGLDASIVVASALLDMYSKC 315
KD P +EY S+ + +GL M+ + S ++K G D + V + L+D Y K
Sbjct: 138 RTRKDSP-NEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKD 196
Query: 316 GQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNV 375
G ++ A +F +L K+ VTW MI+G + G ++LF QL ++ PD V
Sbjct: 197 GNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME-DNVVPDGYILSTV 255
Query: 376 LAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFG 435
L+ACS +PF + + + YG++ +I + G V A ++ G
Sbjct: 256 LSACS--ILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFN--GMP 311
Query: 436 SYGVV-WRALLSA 447
+ ++ W LLS
Sbjct: 312 NKNIISWTTLLSG 324
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 278 bits (711), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 162/555 (29%), Positives = 286/555 (51%), Gaps = 41/555 (7%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ VL +L+A Y + LH Y +K+ LS+V+V ++L+ Y+++ + + ++
Sbjct: 106 PDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRV 165
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F E+P + V+W ++I+G V +G+Y++ L F E+ RSE +D Y+F AL AC L +
Sbjct: 166 FSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQV 225
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
+ G AIH+ ++ + +AN L MY +CG ++D + +F M ++D++SW S+I A
Sbjct: 226 KYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAY 285
Query: 181 ARNGNLELAFGFLHRL------PNPDTISY------------------------------ 204
R G A ++ PN T +
Sbjct: 286 KRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSL 345
Query: 205 ---NEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSK 261
N ++ + G++ A ++ M + SW++I+ GY E F M+
Sbjct: 346 SVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQS 405
Query: 262 DVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIA 321
++ +++LS ++ + G +H+ + GL+ + V S+L++MYSKCG ++ A
Sbjct: 406 GTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Query: 322 DSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSH 381
+F R ++V+ AMI GYA +G + I+LFE+ V +PDSVTF++VL AC+H
Sbjct: 466 SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKV-GFRPDSVTFISVLTACTH 524
Query: 382 TDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVW 441
+ D YF M + Y ++P EH M+ L+ + G + A++MI E+ + VVW
Sbjct: 525 SG-QLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVW 583
Query: 442 RALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRER 501
LL A A D++ R +A +++L+ V L N+Y+S GN + A+ +R M+ +
Sbjct: 584 TTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAK 643
Query: 502 GLRKEAGCSWIEVEN 516
G+ KE G S I++++
Sbjct: 644 GVIKEPGWSSIKIKD 658
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 164/336 (48%), Gaps = 41/336 (12%)
Query: 53 SLADAHKMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSE--IYADAYSFTSA 110
+L A ++F ++P +VSW S+I YV + +AL LF + + + D +
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114
Query: 111 LAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDI 170
L ACGQ ++ G ++H+ VK SL V + + L+DMY + G ++ + VF EM ++
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 171 ISWNSVIAASARNGNLELAFGFLHRLPNPDTIS-------------------YNEVI--- 208
++W ++I G + + + + +S Y + I
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 209 -------------NGIA----QFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEA 251
N +A + G+++D + + +M + SW S++ Y + +A
Sbjct: 235 VIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKA 294
Query: 252 LHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDM 311
+ F +M++ VP +E TF++M S A LS L WG +H V+ GL+ S+ V+++++ M
Sbjct: 295 VETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKM 354
Query: 312 YSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNG 347
YS CG + A +F+ + +++++W+ +I GY + G
Sbjct: 355 YSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAG 390
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 131/269 (48%), Gaps = 42/269 (15%)
Query: 153 GSVEDAIGVFGEMIDKDIISWNSVIA--ASARNGNLEL----AFGFLHRLPNPDT----- 201
G++ A VF +M DI+SW S+I +A N + L A + +PDT
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 202 ----------ISYNEVINGIA--------------------QFGDIEDAIMILSSMPSPN 231
I+Y E ++ A + G I+ + + S MP N
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 232 SSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHS 291
+ +W +I+TG V+ R E L F EM + D YTF+ L AGL + +G IH+
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 292 CVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTK 351
VI +G ++ VA++L MY++CG+++ +F ++ +++V+W ++I Y R G K
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 352 VIELFEQLKTVRDLQPDSVTFLNVLAACS 380
+E F +++ + + P+ TF ++ +AC+
Sbjct: 294 AVETFIKMRNSQ-VPPNEQTFASMFSACA 321
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 5/190 (2%)
Query: 195 RLPNPDTISY--NEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEAL 252
R+ N + + N + + G++ A + MP + SW SI+ YV N EAL
Sbjct: 32 RISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEAL 91
Query: 253 HLFGEMQSKD--VPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLD 310
LF M+ D V D S +L S + +G +H+ +K L +S+ V S+LLD
Sbjct: 92 ILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLD 151
Query: 311 MYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSV 370
MY + G+++ + +F + +N VTW A+ITG G + + F ++ +L D+
Sbjct: 152 MYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS-DTY 210
Query: 371 TFLNVLAACS 380
TF L AC+
Sbjct: 211 TFAIALKACA 220
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 278 bits (710), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 288/561 (51%), Gaps = 50/561 (8%)
Query: 1 PNEYV-LFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHK 59
PN+ L +LR + G Q+HCY+LKSG N+ S L+ Y K A+K
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 60 MFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGS 119
+F +P+ +VVSW++L+SG+V +G + +L+LF E+ R IY + ++F++ L ACG L +
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 120 LQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAA 179
L+ G+ IH +K E V + N L+DMY KCG + +A VF ++D+ +ISWN++IA
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 180 SARNGNLELA---FGFLHRL---PNPDTISYNEVINGIAQFGDIE-----DAIMILSSMP 228
G A FG + PD + ++ + G I ++ S
Sbjct: 183 FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242
Query: 229 SPNSS--------------------------------SWNSILTGYVNRNRVPEALHLFG 256
P+S+ SW+S++ GY EA+ LF
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 302
Query: 257 EMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIK--QGLDASIVVASALLDMYSK 314
+Q + +D + S+++ A + L G + + +K GL+ S++ ++++DMY K
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLK 360
Query: 315 CGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLN 374
CG V+ A+ F + K++++W +ITGY ++G K + +F ++ +++PD V +L
Sbjct: 361 CGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM-LRHNIEPDEVCYLA 419
Query: 375 VLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGF 434
VL+ACSH+ + + E F + + +GIKP VEH ++ L+G+ G + A+ +I +
Sbjct: 420 VLSACSHSGM-IKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 478
Query: 435 GSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVM 494
+W+ LLS D+++ + +++++ + YVM+ NLY G W+
Sbjct: 479 KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNA 538
Query: 495 RNFMRERGLRKEAGCSWIEVE 515
R +GL+KEAG SW+E+E
Sbjct: 539 RELGNIKGLKKEAGMSWVEIE 559
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 276 bits (707), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 175/567 (30%), Positives = 297/567 (52%), Gaps = 56/567 (9%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ + ++++A LG + + +H ++KSG++ +V V+++L+G Y K N ++ ++
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQV 164
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F E+P+ V SWN++IS + QSG+ KAL LF +E S ++ S T A++AC +L L
Sbjct: 165 FDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWL 224
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
+ G IH K VK E + + L+DMYGKC +E A VF +M K +++WNS+I
Sbjct: 225 ERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGY 284
Query: 181 ARNGNLELAFGFLHRL------PNPDTIS-------------YNEVINGIA--------- 212
G+ + L+R+ P+ T++ + + I+G
Sbjct: 285 VAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADI 344
Query: 213 -----------QFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSK 261
+ G+ A + S + SWN +++ Y++ +A+ ++ +M S
Sbjct: 345 YVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV 404
Query: 262 DVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIA 321
V D TF+++L + L+AL G IH + + L+ ++ SALLDMYSKCG + A
Sbjct: 405 GVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEA 464
Query: 322 DSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSH 381
+F S+ +K++V+W MI+ Y +G + + F++++ L+PD VT L VL+AC H
Sbjct: 465 FRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKF-GLKPDGVTLLAVLSACGH 523
Query: 382 TDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVW 441
+ D+ ++F M YGI+P +EH MI ++G+ G + A +I++ S
Sbjct: 524 AGL-IDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNA-- 580
Query: 442 RALLSA--SGACSDLD------VARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASV 493
LLS S C L+ +AR+ +++ D Y++L NLY S +WD A
Sbjct: 581 -ELLSTLFSACCLHLEHSLGDRIARL----LVENYPDDASTYMVLFNLYASGESWDAARR 635
Query: 494 MRNFMRERGLRKEAGCSWIEVENVAAH 520
+R M+E GLRK+ GCSWIE+ + H
Sbjct: 636 VRLKMKEMGLRKKPGCSWIEMSDKVCH 662
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 189/398 (47%), Gaps = 42/398 (10%)
Query: 25 LHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIP-QPSVVSWNSLISGYVQSG 83
+H IL G +V + +L+ Y A +F + V WNSL+SGY ++
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 84 KYRKALNLFVELERSEI-YADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIA 142
+ L +F L I D+++F + + A G LG LG IH+ +VK VV+A
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 143 NCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPN---- 198
+ L+ MY K E+++ VF EM ++D+ SWN+VI+ ++G E A R+ +
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 199 PDTISYNEVINGIAQ--------------------------------FGD---IEDAIMI 223
P+++S I+ ++ +G +E A +
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREV 265
Query: 224 LSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSAL 283
MP + +WNS++ GYV + + + M + + T +++L + L
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Query: 284 TWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGY 343
G IH VI+ ++A I V +L+D+Y KCG+ +A+++F + +WN MI+ Y
Sbjct: 326 LHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSY 385
Query: 344 ARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSH 381
G+ K +E+++Q+ +V ++PD VTF +VL ACS
Sbjct: 386 ISVGNWFKAVEVYDQMVSV-GVKPDVVTFTSVLPACSQ 422
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 288 LIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSL-CRKNLVTWNAMITGYARN 346
L+H ++ GL +V+ +L+++Y C A +F + R ++ WN++++GY++N
Sbjct: 25 LVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKN 84
Query: 347 GDLTKVIELFEQLKTVRDLQPDSVTFLNVLAA 378
+E+F++L PDS TF NV+ A
Sbjct: 85 SMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA 116
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 276 bits (706), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/538 (28%), Positives = 291/538 (54%), Gaps = 45/538 (8%)
Query: 21 YCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYV 80
+ +Q+HC ++K G ++ +V T+L+ Y K + +A +F + + WN++++ Y
Sbjct: 290 FGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA 349
Query: 81 QSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVV 140
++ AL+LF + + + D+++ ++ ++ C LG G ++H+++ K ++
Sbjct: 350 ENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST 409
Query: 141 IANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPN-- 198
I + L+ +Y KCG DA VF M +KD+++W S+I+ +NG + A + +
Sbjct: 410 IESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD 469
Query: 199 ----PDTISYNEVINGIA-----QFG-----------------------DI-------ED 219
PD+ V N A +FG D+ E
Sbjct: 470 DSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEM 529
Query: 220 AIMILSSMPSPNSSSWNSILTGYVNRNRVPE-ALHLFGEMQSKDVPMDEYTFSTMLSGIA 278
A+ + +SM + N +WNS+++ Y +RN +PE ++ LF M S+ + D + +++L I+
Sbjct: 530 ALKVFTSMSTENMVAWNSMISCY-SRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAIS 588
Query: 279 GLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNA 338
++L G +H ++ G+ + + +AL+DMY KCG + A+++F+ + K+L+TWN
Sbjct: 589 STASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNL 648
Query: 339 MITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTK 398
MI GY +GD + LF+++K + PD VTFL++++AC+H+ ++ FE M +
Sbjct: 649 MIYGYGSHGDCITALSLFDEMKKAGE-SPDDVTFLSLISACNHSGF-VEEGKNIFEFMKQ 706
Query: 399 DYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVAR 458
DYGI+P +EH +M+ L+G+ G + A I+ + + +W LLSAS ++++
Sbjct: 707 DYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGI 766
Query: 459 ISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVEN 516
+SA +++++E + YV L NLY G + A+ + M+E+GL K+ GCSWIEV +
Sbjct: 767 LSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSD 824
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 152/523 (29%), Positives = 257/523 (49%), Gaps = 51/523 (9%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPS-VVSWNSLISGYVQ 81
+Q+H ++L++ ++ F+ TAL+ Y K DA ++FVEI S VV WN +I G+
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 82 SGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVI 141
SG +L+L++ + + + + SFT AL AC Q + G IH +VK L +
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 142 ANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARN----GNLELAFGFLHRLP 197
L+ MY KCG V +A VF ++DK + WN+++AA A N L+L FGF+ +
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL-FGFMRQKS 368
Query: 198 N-PDTISYNEVIN-----GIAQFGD----------------IE--------------DAI 221
PD+ + + VI+ G+ +G IE DA
Sbjct: 369 VLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAY 428
Query: 222 MILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKD--VPMDEYTFSTMLSGIAG 279
++ SM + +W S+++G + EAL +FG+M+ D + D +++ + AG
Sbjct: 429 LVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAG 488
Query: 280 LSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAM 339
L AL +G+ +H +IK GL ++ V S+L+D+YSKCG E+A +F S+ +N+V WN+M
Sbjct: 489 LEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSM 548
Query: 340 ITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKD 399
I+ Y+RN I+LF L + + PDSV+ +VL A S T S T
Sbjct: 549 ISCYSRNNLPELSIDLF-NLMLSQGIFPDSVSITSVLVAISSTASLLKGKS--LHGYTLR 605
Query: 400 YGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARI 459
GI ++I + + G A+ + +++ S + W ++ G+ D + +
Sbjct: 606 LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSL-ITWNLMIYGYGSHGDC-ITAL 663
Query: 460 SAAEVIKLEGDS--DYVYVMLCNLYTSHGNWDVASVMRNFMRE 500
S + +K G+S D ++ L + G + + FM++
Sbjct: 664 SLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQ 706
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 199/422 (47%), Gaps = 50/422 (11%)
Query: 9 LLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPS 68
LL+A S L +Y + +H ++ G+ + F++T+L+ Y K L A ++F Q
Sbjct: 66 LLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQ 125
Query: 69 -------VVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL- 120
V WNS+I GY + ++++ + F + + DA+S + ++ + G+
Sbjct: 126 SGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFR 185
Query: 121 -QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDK-DIISWNSVIA 178
+ G IH +++ SL+ + LIDMY K G DA VF E+ DK +++ WN +I
Sbjct: 186 REEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIV 245
Query: 179 AS---------------ARNGNLEL-------AFGFLHRLPNP----------------- 199
A+N +++L A G + N
Sbjct: 246 GFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 200 DTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQ 259
D +++ ++ G + +A + S + WN+++ Y + AL LFG M+
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 260 SKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVE 319
K V D +T S ++S + L +G +H+ + K+ + ++ + SALL +YSKCG
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 320 IADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRD-LQPDSVTFLNVLAA 378
A +F+S+ K++V W ++I+G +NG + +++F +K D L+PDS +V A
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 379 CS 380
C+
Sbjct: 486 CA 487
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 157/363 (43%), Gaps = 51/363 (14%)
Query: 68 SVVSWNSLISGYVQSGKYRKALNLFVELE-RSEIYADAYSFTSALAACGQLGSLQLGMAI 126
S S NS I +Q G+Y +AL+L+ + + S + ++F S L AC L +L G I
Sbjct: 23 SPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTI 82
Query: 127 HSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVF-------GEMIDKDIISWNSVIAA 179
H +V IA L++MY KCG ++ A+ VF + +D+ WNS+I
Sbjct: 83 HGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDG 142
Query: 180 SARNGNLELAFGFLHRL----PNPDTISYNEVINGIAQFGDIE-------DAIMILSSMP 228
+ + G R+ PD S + V++ + + G+ M+ +S+
Sbjct: 143 YFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLD 202
Query: 229 S-------------------------------PNSSSWNSILTGYVNRNRVPEALHLFGE 257
+ N WN ++ G+ +L L+
Sbjct: 203 TDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYML 262
Query: 258 MQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQ 317
++ V + +F+ L + +G IH V+K GL V ++LL MYSKCG
Sbjct: 263 AKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGM 322
Query: 318 VEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLA 377
V A+++F + K L WNAM+ YA N ++LF ++ + + PDS T NV++
Sbjct: 323 VGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ-KSVLPDSFTLSNVIS 381
Query: 378 ACS 380
CS
Sbjct: 382 CCS 384
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 4/231 (1%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ ++ + A + L + Q+H ++K+G + NVFV ++L+ Y K A K+
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKV 533
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F + ++V+WNS+IS Y ++ +++LF + I+ D+ S TS L A SL
Sbjct: 534 FTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASL 593
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
G ++H ++ + + N LIDMY KCG + A +F +M K +I+WN +I
Sbjct: 594 LKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGY 653
Query: 181 ARNGNLELAFGFLHRLP----NPDTISYNEVINGIAQFGDIEDAIMILSSM 227
+G+ A + +PD +++ +I+ G +E+ I M
Sbjct: 654 GSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFM 704
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 115/248 (46%), Gaps = 15/248 (6%)
Query: 233 SSWNSILTGYVNRNRVPEALHLFGEMQ-SKDVPMDEYTFSTMLSGIAGLSALTWGMLIHS 291
+S NS + + + +ALHL+ + S +TF ++L + L+ L++G IH
Sbjct: 25 ASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHG 84
Query: 292 CVIKQGLDASIVVASALLDMYSKCGQVEIADSMF-------RSLCRKNLVTWNAMITGYA 344
V+ G +A++L++MY KCG ++ A +F + +++ WN+MI GY
Sbjct: 85 SVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF 144
Query: 345 RNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAA-CSHTDIPFDKVSEYFESMTKDYGIK 403
+ + + F ++ V ++PD+ + V++ C + ++ + M ++ +
Sbjct: 145 KFRRFKEGVGCFRRM-LVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN-SLD 202
Query: 404 PTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALL---SASGAC-SDLDVARI 459
++I + + G A R+ E+ S V+W ++ SG C S LD+ +
Sbjct: 203 TDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYML 262
Query: 460 SAAEVIKL 467
+ +KL
Sbjct: 263 AKNNSVKL 270
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/534 (29%), Positives = 281/534 (52%), Gaps = 47/534 (8%)
Query: 24 QLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSG 83
++HC LK GF+ +V+V+ +L+ Y + ++ +A +F E+P + SWN++ISGY QSG
Sbjct: 171 KIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSG 230
Query: 84 KYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIAN 143
++AL L L D+ + S L+AC + G G+ IHS +K+ LE + ++N
Sbjct: 231 NAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSN 286
Query: 144 CLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLP----NP 199
LID+Y + G + D VF M +D+ISWNS+I A N A + P
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Query: 200 DTISYNEVINGIAQFGDI------------------------------------EDAIMI 223
D ++ + + ++Q GDI + A +
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406
Query: 224 LSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSK-DVPMDEYTFSTMLSGIAGLSA 282
+ +P+ + SWN+I++GY EA+ ++ M+ + ++ ++ T+ ++L + A
Sbjct: 407 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 283 LTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITG 342
L GM +H ++K GL + V ++L DMY KCG++E A S+F + R N V WN +I
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 526
Query: 343 YARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGI 402
+ +G K + LF+++ ++PD +TF+ +L+ACSH+ + D+ FE M DYGI
Sbjct: 527 HGFHGHGEKAVMLFKEMLD-EGVKPDHITFVTLLSACSHSGL-VDEGQWCFEMMQTDYGI 584
Query: 403 KPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAA 462
P+++H M+ + G+ G++ A + I+ + +W ALLSA ++D+ +I++
Sbjct: 585 TPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASE 644
Query: 463 EVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVEN 516
+ ++E + +V+L N+Y S G W+ +R+ +GLRK G S +EV+N
Sbjct: 645 HLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDN 698
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 188/394 (47%), Gaps = 40/394 (10%)
Query: 25 LHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSGK 84
LH ++ S + NV +S L+ Y + ++A A F I V +WN +ISGY ++G
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 85 YRKALNLF-VELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIAN 143
+ + F + + S + D +F S L AC + G IH +K+ V +A
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAA 189
Query: 144 CLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPNPDTIS 203
LI +Y + +V +A +F EM +D+ SWN++I+ ++GN + A + L D+++
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVT 249
Query: 204 Y-----------------------------------NEVINGIAQFGDIEDAIMILSSMP 228
N++I+ A+FG + D + M
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309
Query: 229 SPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGML 288
+ SWNSI+ Y + A+ LF EM+ + D T ++ S ++ L +
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRS 369
Query: 289 IHSCVIKQG-LDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNG 347
+ +++G I + +A++ MY+K G V+ A ++F L ++++WN +I+GYA+NG
Sbjct: 370 VQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNG 429
Query: 348 DLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSH 381
++ IE++ ++ ++ + T+++VL ACS
Sbjct: 430 FASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 196/448 (43%), Gaps = 63/448 (14%)
Query: 9 LLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPS 68
LL A ++ G +H Y +K G S +FVS L+ Y + L D K+F +
Sbjct: 253 LLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRD 312
Query: 69 VVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHS 128
++SWNS+I Y + + +A++LF E+ S I D + S + QLG ++ ++
Sbjct: 313 LISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQG 372
Query: 129 KIVKYSLERG-----VVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARN 183
++L +G + I N ++ MY K G V+ A VF + + D+ISWN++I+ A+N
Sbjct: 373 ----FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 184 GNLELAFGFLHRLPNPDTISYNE------------------------------------V 207
G A + + I+ N+ V
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 208 INGIAQF----GDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDV 263
+ +A G +EDA+ + +P NS WN+++ + +A+ LF EM + V
Sbjct: 489 VTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 548
Query: 264 PMDEYTFSTMLSGIAGLSALTWGMLIHSCV-IKQGLDASIVVASALLDMYSKCGQVEIAD 322
D TF T+LS + + G + G+ S+ ++DMY + GQ+E A
Sbjct: 549 KPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETAL 608
Query: 323 SMFRSLC-RKNLVTWNAMITGYARNG--DLTKVI--ELFEQLKTVRDLQPDSVTFLNVLA 377
+S+ + + W A+++ +G DL K+ LFE ++P+ V + +L+
Sbjct: 609 KFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFE-------VEPEHVGYHVLLS 661
Query: 378 ACSHTDIPFDKVSEYFESMTKDYGIKPT 405
+ ++ V E S+ G++ T
Sbjct: 662 NMYASAGKWEGVDE-IRSIAHGKGLRKT 688
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 141/305 (46%), Gaps = 52/305 (17%)
Query: 119 SLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIA 178
+LQ +H+++V + V I+ L+++Y G+V A F + ++D+ +WN +I+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 179 ASARNGN------------------------------------------LELAFGFLHRL 196
R GN L L FGF+
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMW-- 183
Query: 197 PNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFG 256
D +I+ +++ + +A ++ MP + SWN++++GY EAL L
Sbjct: 184 ---DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 257 EMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCG 316
+++ MD T ++LS G+ IHS IK GL++ + V++ L+D+Y++ G
Sbjct: 241 GLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 317 QVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVL 376
++ +F + ++L++WN++I Y N + I LF++++ R +QPD +T +++
Sbjct: 297 RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR-IQPDCLTLISLA 355
Query: 377 AACSH 381
+ S
Sbjct: 356 SILSQ 360
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Query: 2 NEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMF 61
N+ +L A S G +LH +LK+G +VFV T+L Y K L DA +F
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 62 VEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQ 121
+IP+ + V WN+LI+ + G KA+ LF E+ + D +F + L+AC G +
Sbjct: 510 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 569
Query: 122 LGMAIHSKI-VKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEM-IDKDIISWNSVIAA 179
G + Y + + C++DMYG+ G +E A+ M + D W ++++A
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 180 SARNGNLELA 189
+GN++L
Sbjct: 630 CRVHGNVDLG 639
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 289 IHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGD 348
+H+ ++ ++ +++ L+++Y G V +A F + +++ WN MI+GY R G+
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 349 LTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEH 408
++VI F L PD TF +VL AC T I +K+ + +G V
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC-RTVIDGNKI----HCLALKFGFMWDVYV 187
Query: 409 CCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSA 447
S+I L + V A+ + E+ G W A++S
Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMG-SWNAMISG 225
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 284/546 (52%), Gaps = 51/546 (9%)
Query: 15 DLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNS 74
DLG +Q+H ++K G+ NV+V ++L+ Y K + DA + F EI +P+ VSWN+
Sbjct: 118 DLG-----EQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNA 172
Query: 75 LISGYVQSGKYRKALNLFVELE-RSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKY 133
LI+G+VQ + A L +E ++ + DA +F L L +H+K++K
Sbjct: 173 LIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKL 232
Query: 134 SLERGVVIANCLIDMYGKCGSVEDAIGVF-GEMIDKDIISWNSVIAASARNGNLELAFGF 192
L+ + I N +I Y CGSV DA VF G KD+ISWNS+IA +++ E AF
Sbjct: 233 GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFEL 292
Query: 193 LHRLP----NPDTISY-----------------------------------NEVINGIAQ 213
++ D +Y N +I+ Q
Sbjct: 293 FIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQ 352
Query: 214 F--GDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFS 271
F G +EDA+ + S+ S + SWNSI+TG+ + +A+ F ++S ++ +D+Y FS
Sbjct: 353 FPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFS 412
Query: 272 TMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRK 331
+L + L+ L G IH+ K G ++ V S+L+ MYSKCG +E A F+ + K
Sbjct: 413 ALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSK 472
Query: 332 N-LVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVS 390
+ V WNAMI GYA++G ++LF Q+ ++++ D VTF +L ACSHT + + +
Sbjct: 473 HSTVAWNAMILGYAQHGLGQVSLDLFSQMCN-QNVKLDHVTFTAILTACSHTGLIQEGL- 530
Query: 391 EYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGA 450
E M Y I+P +EH + + L+G+ G V +A+ +I + +V + L A
Sbjct: 531 ELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRA 590
Query: 451 CSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCS 510
C ++++A A ++++E + + YV L ++Y+ W+ + ++ M+ERG++K G S
Sbjct: 591 CGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWS 650
Query: 511 WIEVEN 516
WIE+ N
Sbjct: 651 WIEIRN 656
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 220/463 (47%), Gaps = 46/463 (9%)
Query: 26 HCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSGKY 85
HCY +K G +S+++VS ++ Y K L A+ +F E+P+ VSWN++ISGY GK
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 86 RKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCL 145
A LF ++RS D YSF+ L + LG +H ++K E V + + L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 146 IDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPNPDTISY- 204
+DMY KC VEDA F E+ + + +SWN++IA + +++ AF L + ++
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 205 ---------------------------------------NEVINGIAQFGDIEDAIMILS 225
N +I+ A G + DA +
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 226 SM-PSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALT 284
+ S + SWNS++ G+ A LF +MQ V D YT++ +LS +G
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322
Query: 285 WGMLIHSCVIKQGLDASIVVASALLDMYSK--CGQVEIADSMFRSLCRKNLVTWNAMITG 342
+G +H VIK+GL+ +AL+ MY + G +E A S+F SL K+L++WN++ITG
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382
Query: 343 YARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGI 402
+A+ G ++ F L++ +++ D F +L +CS D+ ++ + ++ G
Sbjct: 383 FAQKGLSEDAVKFFSYLRS-SEIKVDDYAFSALLRSCS--DLATLQLGQQIHALATKSGF 439
Query: 403 KPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALL 445
S+I + + G + A++ +++ V W A++
Sbjct: 440 VSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 123/243 (50%), Gaps = 2/243 (0%)
Query: 205 NEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVP 264
N +++ +FG + A M+ MP +S SWN++++GY + ++ +A LF M+
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSD 98
Query: 265 MDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSM 324
+D Y+FS +L GIA + G +H VIK G + ++ V S+L+DMY+KC +VE A
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEA 158
Query: 325 FRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDI 384
F+ + N V+WNA+I G+ + D+ L ++ + D+ TF +L D
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLD--DP 216
Query: 385 PFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRAL 444
F + + + G++ + C +MI G V A+R+ LG + W ++
Sbjct: 217 MFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSM 276
Query: 445 LSA 447
++
Sbjct: 277 IAG 279
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 7/231 (3%)
Query: 4 YVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKI--NSLADAHKMF 61
Y LL A S + + LH ++K G + AL+ Y + ++ DA +F
Sbjct: 306 YTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLF 365
Query: 62 VEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQ 121
+ ++SWNS+I+G+ Q G A+ F L SEI D Y+F++ L +C L +LQ
Sbjct: 366 ESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQ 425
Query: 122 LGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDK-DIISWNSVIAAS 180
LG IH+ K + + LI MY KCG +E A F ++ K ++WN++I
Sbjct: 426 LGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGY 485
Query: 181 ARNGNLELAFGFLHRLPNP----DTISYNEVINGIAQFGDIEDAIMILSSM 227
A++G +++ ++ N D +++ ++ + G I++ + +L+ M
Sbjct: 486 AQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLM 536
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 3/191 (1%)
Query: 2 NEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMF 61
++Y LLR+ SDL QQ+H KSGF+SN FV ++L+ Y K + A K F
Sbjct: 407 DDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCF 466
Query: 62 VEI-PQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
+I + S V+WN++I GY Q G + +L+LF ++ + D +FT+ L AC G +
Sbjct: 467 QQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLI 526
Query: 121 QLGMAIHSKIVK-YSLERGVVIANCLIDMYGKCGSVEDAIGVFGEM-IDKDIISWNSVIA 178
Q G+ + + + Y ++ + +D+ G+ G V A + M ++ D + + +
Sbjct: 527 QEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLG 586
Query: 179 ASARNGNLELA 189
G +E+A
Sbjct: 587 VCRACGEIEMA 597
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 288 LIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNG 347
L H IK G + I V++ +LD Y K G + A+ +F + +++ V+WN MI+GY G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 348 DLTKVIELFEQLK 360
L LF +K
Sbjct: 81 KLEDAWCLFTCMK 93
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 266/535 (49%), Gaps = 45/535 (8%)
Query: 24 QLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSG 83
Q H I+K N+FV AL+ Y K +L DA ++F + V+WN++I YVQ
Sbjct: 449 QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDE 508
Query: 84 KYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIAN 143
+A +LF + I +D S L AC + L G +H VK L+R + +
Sbjct: 509 NESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGS 568
Query: 144 CLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAF----GFLHRLPNP 199
LIDMY KCG ++DA VF + + ++S N++IA ++N NLE A L R NP
Sbjct: 569 SLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNP 627
Query: 200 DTISYNEVIN------------------------------GIAQFG------DIEDAIMI 223
I++ ++ GI+ G + +A +
Sbjct: 628 SEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACAL 687
Query: 224 LSSMPSPNSSS-WNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSA 282
S + SP S W +++G+ EAL + EM+ V D+ TF T+L + LS+
Sbjct: 688 FSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSS 747
Query: 283 LTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRK-NLVTWNAMIT 341
L G IHS + D + ++ L+DMY+KCG ++ + +F + R+ N+V+WN++I
Sbjct: 748 LREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLIN 807
Query: 342 GYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYG 401
GYA+NG +++F+ ++ + PD +TFL VL ACSH D + FE M YG
Sbjct: 808 GYAKNGYAEDALKIFDSMRQSH-IMPDEITFLGVLTACSHAGKVSDG-RKIFEMMIGQYG 865
Query: 402 IKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISA 461
I+ V+H M+ L+G+ G + A I +W +LL A D ISA
Sbjct: 866 IEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISA 925
Query: 462 AEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVEN 516
++I+LE + YV+L N+Y S G W+ A+ +R MR+RG++K G SWI+VE
Sbjct: 926 EKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQ 980
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 194/362 (53%), Gaps = 6/362 (1%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
+ +H L G S + A++ Y K ++ A K F + + V +WNS++S Y
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSI 138
Query: 83 GKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIA 142
GK K L FV L ++I+ + ++F+ L+ C + +++ G IH ++K LER
Sbjct: 139 GKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCG 198
Query: 143 NCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPN---- 198
L+DMY KC + DA VF ++D + + W + + + G E A R+ +
Sbjct: 199 GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 199 PDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEM 258
PD +++ VIN + G ++DA ++ M SP+ +WN +++G+ R A+ F M
Sbjct: 259 PDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM 318
Query: 259 QSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQV 318
+ V T ++LS I ++ L G+++H+ IK GL ++I V S+L+ MYSKC ++
Sbjct: 319 RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKM 378
Query: 319 EIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAA 378
E A +F +L KN V WNAMI GYA NG+ KV+ELF +K+ D TF ++L+
Sbjct: 379 EAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKS-SGYNIDDFTFTSLLST 437
Query: 379 CS 380
C+
Sbjct: 438 CA 439
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 191/390 (48%), Gaps = 15/390 (3%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
PN++ +L + + +Q+HC ++K G N + AL+ Y K + ++DA ++
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F I P+ V W L SGYV++G +A+ +F + D +F + + +LG L
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKL 277
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIIS----WNSV 176
+ + ++ VV N +I +GK G AI F M + S SV
Sbjct: 278 KDARLLFGEMSSPD----VVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSV 333
Query: 177 IAASARNGNLELAFGFLHRLPNPDTISYN-----EVINGIAQFGDIEDAIMILSSMPSPN 231
++A NL+L +H ++ N +++ ++ +E A + ++ N
Sbjct: 334 LSAIGIVANLDLGL-VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392
Query: 232 SSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHS 291
WN+++ GY + + + LF +M+S +D++TF+++LS A L G HS
Sbjct: 393 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Query: 292 CVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTK 351
+IK+ L ++ V +AL+DMY+KCG +E A +F +C ++ VTWN +I Y ++ + ++
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESE 512
Query: 352 VIELFEQLKTVRDLQPDSVTFLNVLAACSH 381
+LF+++ + D + L AC+H
Sbjct: 513 AFDLFKRMNLC-GIVSDGACLASTLKACTH 541
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 171/387 (44%), Gaps = 52/387 (13%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
+Q+HC +K G ++ ++L+ Y K + DA K+F +P+ SVVS N+LI+GY Q+
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN 608
Query: 83 GKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSL-ERGVVI 141
+A+ LF E+ + +F + + AC + SL LG H +I K G +
Sbjct: 609 -NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYL 667
Query: 142 ANCLIDMYGKCGSVEDAIGVFGEMID-KDIISWNSVIAASARNGNLELAFGF-------- 192
L+ MY + +A +F E+ K I+ W +++ ++NG E A F
Sbjct: 668 GISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG 727
Query: 193 -------------------------------LHRLPNPDTISYNEVINGIAQFGDIEDAI 221
H + D ++ N +I+ A+ GD++ +
Sbjct: 728 VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 222 MILSSM-PSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGL 280
+ M N SWNS++ GY +AL +F M+ + DE TF +L+ +
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA 847
Query: 281 SALTWGMLIHSCVIKQ-GLDASIVVASALLDMYSKCGQVEIADSMFRSL-CRKNLVTWNA 338
++ G I +I Q G++A + + ++D+ + G ++ AD + + + W++
Sbjct: 848 GKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSS 907
Query: 339 MITGYARNGD-------LTKVIELFEQ 358
++ +GD K+IEL Q
Sbjct: 908 LLGACRIHGDDIRGEISAEKLIELEPQ 934
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 166/390 (42%), Gaps = 80/390 (20%)
Query: 119 SLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIA 178
+L++G A+HSK + ++ + N ++D+Y KC
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQ------------------------ 110
Query: 179 ASARNGNLELAFGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSI 238
+SY E QF +E + ++WNS+
Sbjct: 111 -----------------------VSYAE-----KQFDFLEKDV-----------TAWNSM 131
Query: 239 LTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGL 298
L+ Y + + + L F + + +++TFS +LS A + + +G IH +IK GL
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 299 DASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQ 358
+ + AL+DMY+KC ++ A +F + N V W + +GY + G + + +FE+
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 359 LKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSE---YFESMTKDYGIKPTVEHCCSMIRL 415
++ +PD + F+ V+ +T I K+ + F M+ P V MI
Sbjct: 252 MRD-EGHRPDHLAFVTVI----NTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISG 301
Query: 416 MGQKG-EVWRAQRM--IRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSD 472
G++G E + +R+ S ++LSA G ++LD+ + AE IKL S+
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 473 -YVYVMLCNLYTSHGNWDVASVMRNFMRER 501
YV L ++Y+ + A+ + + E+
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/541 (29%), Positives = 292/541 (53%), Gaps = 51/541 (9%)
Query: 23 QQLHCYILKSGFLS-NVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQ 81
+++H +++ +G + V + L+ Y K S+ADA ++F + VSWNS+I+G Q
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQ 392
Query: 82 SGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVI 141
+G + +A+ + + R +I +++ S+L++C L +LG IH + +K ++ V +
Sbjct: 393 NGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSV 452
Query: 142 ANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNG-----------NLELA- 189
+N L+ +Y + G + + +F M + D +SWNS+I A AR+ N + A
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG 512
Query: 190 -------------------FGFL----HRLPNPDTI-----SYNEVINGIAQFGDIEDAI 221
FG L H L + I + N +I + G+++
Sbjct: 513 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCE 572
Query: 222 MILSSMPSPNSS-SWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGL 280
I S M + +WNS+++GY++ + +AL L M +D + ++T+LS A +
Sbjct: 573 KIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASV 632
Query: 281 SALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMI 340
+ L GM +H+C ++ L++ +VV SAL+DMYSKCG+++ A F ++ +N +WN+MI
Sbjct: 633 ATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMI 692
Query: 341 TGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDY 400
+GYAR+G + ++LFE +K PD VTF+ VL+ACSH + ++ ++FESM+ Y
Sbjct: 693 SGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL-LEEGFKHFESMSDSY 751
Query: 401 GIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGAC-----SDLD 455
G+ P +EH M ++G+ GE+ + + I ++ ++WR +L GAC +
Sbjct: 752 GLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL---GACCRANGRKAE 808
Query: 456 VARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVE 515
+ + +A + +LE ++ YV+L N+Y + G W+ R M++ ++KEAG SW+ ++
Sbjct: 809 LGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMK 868
Query: 516 N 516
+
Sbjct: 869 D 869
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 212/447 (47%), Gaps = 56/447 (12%)
Query: 25 LHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSGK 84
H + K+ +V++ L+ Y + A K+F E+P + VSW ++SGY ++G+
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 85 YRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQL--GMAIHSKIVKYSLERGVVIA 142
+++AL ++ + I+++ Y+F S L AC ++GS+ + G IH + K S V++
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 143 NCLIDMYGKC-GSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLH------- 194
N LI MY KC GSV A+ FG++ K+ +SWNS+I+ ++ G+ AF
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 195 ---------------RLPNPDTISYNEV-------------------INGIAQFGDIEDA 220
L PD ++ ++ A+ G + A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 221 IMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSK-DVPMDEYTFSTMLSGIAG 279
+ + M + N+ + N ++ G V + EA LF +M S DV + Y +LS
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPE 320
Query: 280 LS-----ALTWGMLIHSCVIKQGL-DASIVVASALLDMYSKCGQVEIADSMFRSLCRKNL 333
S L G +H VI GL D + + + L++MY+KCG + A +F + K+
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 334 VTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYF 393
V+WN+MITG +NG + +E ++ ++ D+ P S T ++ L++C+ + + K+ +
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLISSLSSCA--SLKWAKLGQQI 437
Query: 394 ESMTKDYGIKPTVEHCCSMIRLMGQKG 420
+ GI V +++ L + G
Sbjct: 438 HGESLKLGIDLNVSVSNALMTLYAETG 464
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 201/428 (46%), Gaps = 53/428 (12%)
Query: 1 PNEYVLFHLLRASSDLGWD--TYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAH 58
P EY L+ + L +Q+ C I KSG L+++FV + L+ + K SL+ A
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 59 KMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELE-----RSEIYADAYSFTSALAA 113
K+F ++ + V+ N L+ G V+ +A LF+++ E Y S +
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSL 323
Query: 114 CGQLGSLQLGMAIHSKIVKYSLERGVV-IANCLIDMYGKCGSVEDAIGVFGEMIDKDIIS 172
++G L+ G +H ++ L +V I N L++MY KCGS+ DA VF M DKD +S
Sbjct: 324 AEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382
Query: 173 WNSVIAASARNGN----------------LELAFGFLHRLPNPDTISY------------ 204
WNS+I +NG L +F + L + ++ +
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 205 -----------NEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNR-VPEAL 252
N ++ A+ G + + I SSMP + SWNSI+ R +PEA+
Sbjct: 443 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAV 502
Query: 253 HLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMY 312
F Q ++ TFS++LS ++ LS G IH +K + +AL+ Y
Sbjct: 503 VCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACY 562
Query: 313 SKCGQVEIADSMFRSLC-RKNLVTWNAMITGYARNGDLTKVIEL-FEQLKTVRDLQPDSV 370
KCG+++ + +F + R++ VTWN+MI+GY N L K ++L + L+T + L DS
Sbjct: 563 GKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRL--DSF 620
Query: 371 TFLNVLAA 378
+ VL+A
Sbjct: 621 MYATVLSA 628
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 177/409 (43%), Gaps = 49/409 (11%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P + L L + + L W QQ+H LK G NV VS ALM Y + L + K+
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 61 FVEIPQPSVVSWNSLISGYVQSGK-YRKALNLFVELERSEIYADAYSFTSALAACGQLGS 119
F +P+ VSWNS+I +S + +A+ F+ +R+ + +F+S L+A L
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 120 LQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMID-KDIISWNSVIA 178
+LG IH +K ++ N LI YGKCG ++ +F M + +D ++WNS+I+
Sbjct: 533 GELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592
Query: 179 ASARN----GNLELAFGFLHRLPNPDTISYNEVINGIA---------------------- 212
N L+L + L D+ Y V++ A
Sbjct: 593 GYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLES 652
Query: 213 -------------QFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQ 259
+ G ++ A+ ++MP NS SWNS+++GY + EAL LF M+
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 260 -SKDVPMDEYTFSTMLSGIAGLSALTWGML-IHSCVIKQGLDASIVVASALLDMYSKCGQ 317
P D TF +LS + L G S GL I S + D+ + G+
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGE 772
Query: 318 VE-IADSMFRSLCRKNLVTWNAMITGYAR-NGDLT----KVIELFEQLK 360
++ + D + + + N++ W ++ R NG K E+ QL+
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLE 821
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 170/394 (43%), Gaps = 49/394 (12%)
Query: 2 NEYVLFHLLRASSDLG--WDTYCQQLHCYILKSGFLSNVFVSTALMGFYRK-INSLADAH 58
N+Y +LRA ++G + +Q+H + K + + VS L+ Y K I S+ A
Sbjct: 101 NQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYAL 160
Query: 59 KMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLG 118
F +I + VSWNS+IS Y Q+G R A +F ++ Y+F S + L
Sbjct: 161 CAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLT 220
Query: 119 S--LQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSV 176
++L I I K L + + + L+ + K GS+ A VF +M ++ ++ N +
Sbjct: 221 EPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGL 280
Query: 177 IAASARNGNLELA---FGFLHRLPNPDTISY----------------------------- 204
+ R E A F ++ + + SY
Sbjct: 281 MVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVI 340
Query: 205 ------------NEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEAL 252
N ++N A+ G I DA + M +S SWNS++TG EA+
Sbjct: 341 TTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAV 400
Query: 253 HLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMY 312
+ M+ D+ +T + LS A L G IH +K G+D ++ V++AL+ +Y
Sbjct: 401 ERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLY 460
Query: 313 SKCGQVEIADSMFRSLCRKNLVTWNAMITGYARN 346
++ G + +F S+ + V+WN++I AR+
Sbjct: 461 AETGYLNECRKIFSSMPEHDQVSWNSIIGALARS 494
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/555 (28%), Positives = 285/555 (51%), Gaps = 41/555 (7%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P Y +LL+ D +++H ++KSGF ++F T L Y K + +A K+
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F +P+ +VSWN++++GY Q+G R AL + + + + S L A L +
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
+G IH ++ + V I+ L+DMY KCGS+E A +F M++++++SWNS+I A
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 181 ARNGNLELAFGFLHRLPN----PDTISYNEVINGIAQFGDIE------------------ 218
+N N + A ++ + P +S ++ A GD+E
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 219 -----------------DAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSK 261
A + + S SWN+++ G+ R +AL+ F +M+S+
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 432
Query: 262 DVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIA 321
V D +T+ ++++ IA LS IH V++ LD ++ V +AL+DMY+KCG + IA
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 322 DSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSH 381
+F + +++ TWNAMI GY +G +ELFE+++ ++P+ VTFL+V++ACSH
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK-GTIKPNGVTFLSVISACSH 551
Query: 382 TDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVW 441
+ + + + F M ++Y I+ +++H +M+ L+G+ G + A I ++ V+
Sbjct: 552 SGL-VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 610
Query: 442 RALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRER 501
A+L A +++ A +A + +L D +V+L N+Y + W+ +R M +
Sbjct: 611 GAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 670
Query: 502 GLRKEAGCSWIEVEN 516
GLRK GCS +E++N
Sbjct: 671 GLRKTPGCSMVEIKN 685
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 188/401 (46%), Gaps = 40/401 (9%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
+Q+ + K+G F T L+ + + S+ +A ++F I V +++++ G+ +
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 83 GKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIA 142
KAL FV + ++ Y+FT L CG L++G IH +VK +
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 143 NCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRL----PN 198
L +MY KC V +A VF M ++D++SWN+++A ++NG +A + +
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 199 PDTISYNEVINGI-----------------------------------AQFGDIEDAIMI 223
P I+ V+ + A+ G +E A +
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 224 LSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSAL 283
M N SWNS++ YV EA+ +F +M + V + + L A L L
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDL 353
Query: 284 TWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGY 343
G IH ++ GLD ++ V ++L+ MY KC +V+ A SMF L + LV+WNAMI G+
Sbjct: 354 ERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGF 413
Query: 344 ARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDI 384
A+NG + F Q+++ R ++PD+ T+++V+ A + I
Sbjct: 414 AQNGRPIDALNYFSQMRS-RTVKPDTFTYVSVITAIAELSI 453
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/552 (29%), Positives = 276/552 (50%), Gaps = 43/552 (7%)
Query: 2 NEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMF 61
++ V L+A ++L +++HC ++K NV V T L+ Y K + AHK+F
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVF 199
Query: 62 VEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQ 121
+I +VV W S+I+GYV++ + L LF + + + + Y++ + + AC +L +L
Sbjct: 200 NDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALH 259
Query: 122 LGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASA 181
G H +VK +E + L+DMY KCG + +A VF E D++ W ++I
Sbjct: 260 QGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 319
Query: 182 RNGNLELAFGFLHRLP----NPDTISYNEVINGIAQFGDIE------------------- 218
NG++ A ++ P+ ++ V++G ++E
Sbjct: 320 HNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNV 379
Query: 219 ---------------DAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDV 263
DA + + +WNSI++G+ + EAL LF M S+ V
Sbjct: 380 ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESV 439
Query: 264 PMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGL--DASIVVASALLDMYSKCGQVEIA 321
+ T +++ S A L +L G +H+ +K G +S+ V +ALLD Y+KCG + A
Sbjct: 440 TPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA 499
Query: 322 DSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSH 381
+F ++ KN +TW+AMI GY + GD +ELFE++ + +P+ TF ++L+AC H
Sbjct: 500 RLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLK-KQQKPNESTFTSILSACGH 558
Query: 382 TDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVW 441
T + ++ +YF SM KDY P+ +H M+ ++ + GE+ +A +I ++ +
Sbjct: 559 TGM-VNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCF 617
Query: 442 RALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRER 501
A L G S D+ I +++ L D YV++ NLY S G W+ A +RN M++R
Sbjct: 618 GAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQR 677
Query: 502 GLRKEAGCSWIE 513
GL K AG S +E
Sbjct: 678 GLSKIAGHSTME 689
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 191/398 (47%), Gaps = 44/398 (11%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
+Q H + +G + ++ ++T L+ Y DA +F +IP+P W ++ Y +
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 83 GKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIA 142
+ + + L+ L + D F+ AL AC +L L G IH ++VK VV+
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLT 180
Query: 143 NCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPNPDTI 202
L+DMY KCG ++ A VF ++ ++++ W S+IA +N E +R+ + +
Sbjct: 181 G-LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 203 ----SYNEVI---------------------NGI--------------AQFGDIEDAIMI 223
+Y +I +GI + GDI +A +
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 224 LSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSAL 283
+ + W +++ GY + V EAL LF +M+ ++ + T +++LSG + L
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENL 359
Query: 284 TWGMLIHSCVIKQGL-DASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITG 342
G +H IK G+ D + VA+AL+ MY+KC Q A +F K++V WN++I+G
Sbjct: 360 ELGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISG 417
Query: 343 YARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACS 380
+++NG + + + LF ++ + + P+ VT ++ +AC+
Sbjct: 418 FSQNGSIHEALFLFHRMNS-ESVTPNGVTVASLFSACA 454
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 6/217 (2%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFL--SNVFVSTALMGFYRKINSLADAH 58
PN + L A + LG LH Y +K GFL S+V V TAL+ FY K A
Sbjct: 441 PNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSAR 500
Query: 59 KMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLG 118
+F I + + ++W+++I GY + G +L LF E+ + + + +FTS L+ACG G
Sbjct: 501 LIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTG 560
Query: 119 SLQLGMAIHSKIVK-YSLERGVVIANCLIDMYGKCGSVEDAIGVFGEM-IDKDIISWNSV 176
+ G S + K Y+ C++DM + G +E A+ + +M I D+ + +
Sbjct: 561 MVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAF 620
Query: 177 IAASARNGNLELAFGFLHRLPN--PDTISYNEVINGI 211
+ + +L + ++ + PD SY +++ +
Sbjct: 621 LHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNL 657
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 5/232 (2%)
Query: 214 FGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTM 273
FG +DA ++ +P P+ W +L Y E + L+ + D+ FS
Sbjct: 89 FGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKA 148
Query: 274 LSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNL 333
L L L G IH C + + VV + LLDMY+KCG+++ A +F + +N+
Sbjct: 149 LKACTELQDLDNGKKIH-CQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNV 207
Query: 334 VTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYF 393
V W +MI GY +N + + LF +++ ++ + T+ ++ AC T + ++F
Sbjct: 208 VCWTSMIAGYVKNDLCEEGLVLFNRMRE-NNVLGNEYTYGTLIMAC--TKLSALHQGKWF 264
Query: 394 ESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALL 445
GI+ + S++ + + G++ A+R+ E V+W A++
Sbjct: 265 HGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDL-VMWTAMI 315
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 267 bits (683), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/524 (30%), Positives = 284/524 (54%), Gaps = 13/524 (2%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P + L AS+++G +Q H + +G + + T+L+ FY K+ + A +
Sbjct: 272 PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMV 331
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F + + VV+WN +ISGYVQ G A+ + + ++ D + + ++A + +L
Sbjct: 332 FDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENL 391
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
+LG + +++S E +V+A+ ++DMY KCGS+ DA VF ++KD+I WN+++AA
Sbjct: 392 KLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAY 451
Query: 181 ARNG----NLELAFGF-LHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPS----PN 231
A +G L L +G L +P P+ I++N +I + + G +++A + M S PN
Sbjct: 452 AESGLSGEALRLFYGMQLEGVP-PNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPN 510
Query: 232 SSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHS 291
SW +++ G V EA+ +MQ + + ++ + LS A L++L G IH
Sbjct: 511 LISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHG 570
Query: 292 CVIKQGLDASIV-VASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLT 350
+I+ +S+V + ++L+DMY+KCG + A+ +F S L NAMI+ YA G+L
Sbjct: 571 YIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLK 630
Query: 351 KVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCC 410
+ I L+ L+ V L+PD++T NVL+AC+H ++ E F + +KP +EH
Sbjct: 631 EAIALYRSLEGV-GLKPDNITITNVLSACNHAG-DINQAIEIFTDIVSKRSMKPCLEHYG 688
Query: 411 SMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGD 470
M+ L+ GE +A R+I E+ F + ++L+++ ++ + ++++ E +
Sbjct: 689 LMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPE 748
Query: 471 SDYVYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEV 514
+ YV + N Y G+WD MR M+ +GL+K+ GCSWI++
Sbjct: 749 NSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQI 792
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 139/515 (26%), Positives = 242/515 (46%), Gaps = 49/515 (9%)
Query: 23 QQLHCYILKSG--FLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYV 80
+Q+H ILK+G + N ++ T L+ FY K ++L A +F ++ +V SW ++I
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKC 149
Query: 81 QSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVV 140
+ G AL FVE+ +EI+ D + + ACG L + G +H +VK LE V
Sbjct: 150 RIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVF 209
Query: 141 IANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRL---- 196
+A+ L DMYGKCG ++DA VF E+ D++ ++WN+++ +NG E A +
Sbjct: 210 VASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG 269
Query: 197 --PNPDTISYN-------------------EVINGI--------------AQFGDIEDAI 221
P T+S ++NG+ + G IE A
Sbjct: 270 VEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAE 329
Query: 222 MILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLS 281
M+ M + +WN I++GYV + V +A+++ M+ + + D T +T++S A
Sbjct: 330 MVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTE 389
Query: 282 ALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMIT 341
L G + I+ ++ IV+AS ++DMY+KCG + A +F S K+L+ WN ++
Sbjct: 390 NLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLA 449
Query: 342 GYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYG 401
YA +G + + LF ++ + + P+ +T+ N++ + D+ + F M + G
Sbjct: 450 AYAESGLSGEALRLFYGMQ-LEGVPPNVITW-NLIILSLLRNGQVDEAKDMFLQM-QSSG 506
Query: 402 IKPTVEHCCSMIRLMGQKG---EVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVAR 458
I P + +M+ M Q G E R ++E G LSA + L + R
Sbjct: 507 IIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGR 566
Query: 459 ISAAEVIKLEGDSDYVYV--MLCNLYTSHGNWDVA 491
+I+ S V + L ++Y G+ + A
Sbjct: 567 TIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA 601
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 192/425 (45%), Gaps = 81/425 (19%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ +V+ ++ +A L W + + +H Y++KSG VFV+++L Y K L DA K+
Sbjct: 171 PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 230
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F EIP + V+WN+L+ GYVQ+GK +A+ LF ++ + + + ++ L+A +G +
Sbjct: 231 FDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGV 290
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVI--- 177
+ G H+ + +E ++ L++ Y K G +E A VF M +KD+++WN +I
Sbjct: 291 EEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGY 350
Query: 178 --------------------------------AASARNGNLELA-----FGFLHRLPNPD 200
+A+AR NL+L + H + D
Sbjct: 351 VQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFES-D 409
Query: 201 TISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQS 260
+ + V++ A+ G I DA + S + WN++L Y EAL LF MQ
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 261 KDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEI 320
+ VP + +TW ++I S + + GQV+
Sbjct: 470 EGVPPN---------------VITWNLIILSLL--------------------RNGQVDE 494
Query: 321 ADSMFRSLCR----KNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVL 376
A MF + NL++W M+ G +NG + I +++ L+P++ + L
Sbjct: 495 AKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQE-SGLRPNAFSITVAL 553
Query: 377 AACSH 381
+AC+H
Sbjct: 554 SACAH 558
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 22/227 (9%)
Query: 229 SPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGML 288
SP+S+S+ ++ + EAL L EM +++ + + +L G L+ G
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91
Query: 289 IHSCVIKQG--LDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYAR- 345
IH+ ++K G + + + L+ Y+KC +EIA+ +F L +N+ +W A+I R
Sbjct: 92 IHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRI 151
Query: 346 ---NGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGI 402
G L +E+ E ++ PD+ NV AC F Y +
Sbjct: 152 GLCEGALMGFVEMLEN-----EIFPDNFVVPNVCKACGALKW------SRFGRGVHGYVV 200
Query: 403 KPTVEHCC----SMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALL 445
K +E C S+ + G+ G + A ++ E+ V W AL+
Sbjct: 201 KSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIP-DRNAVAWNALM 246
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 266 bits (679), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 169/561 (30%), Positives = 291/561 (51%), Gaps = 51/561 (9%)
Query: 1 PNEYVLFHLLRA---SSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADA 57
P+++ +++A SSD+G +QLH ++K S++ AL+ Y + N ++DA
Sbjct: 166 PDQFAFGSIIKACASSSDVGLG---KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDA 222
Query: 58 HKMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVE-LERSEIYADAYSFTSALAACGQ 116
++F IP ++SW+S+I+G+ Q G +AL+ E L + + Y F S+L AC
Sbjct: 223 SRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSS 282
Query: 117 LGSLQLGMAIHSKIVKYSLERGVVIANC-LIDMYGKCGSVEDAIGVFGEMIDKDIISWNS 175
L G IH +K L G IA C L DMY +CG + A VF ++ D SWN
Sbjct: 283 LLRPDYGSQIHGLCIKSELA-GNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNV 341
Query: 176 VIAASARNGNLELAFGFLHRLPN----PDTISYNEVING----------------IAQFG 215
+IA A NG + A ++ + PD IS ++ I ++G
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWG 401
Query: 216 DIEDAIMILSSMP--------------------SPNSSSWNSILTGYVNRNRVPEALHLF 255
+ D + S + + +S SWN+ILT + + E L LF
Sbjct: 402 FLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF 461
Query: 256 GEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKC 315
M + D T +L G +S+L G +H +K GL + + L+DMY+KC
Sbjct: 462 KLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKC 521
Query: 316 GQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNV 375
G + A +F S+ +++V+W+ +I GYA++G + + LF+++K+ ++P+ VTF+ V
Sbjct: 522 GSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA-GIEPNHVTFVGV 580
Query: 376 LAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFG 435
L ACSH + + + Y +M ++GI PT EHC ++ L+ + G + A+R I E+
Sbjct: 581 LTACSHVGLVEEGLKLY-ATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE 639
Query: 436 SYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMR 495
VVW+ LLSA ++ +A+ +A ++K++ + +V+LC+++ S GNW+ A+++R
Sbjct: 640 PDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLR 699
Query: 496 NFMRERGLRKEAGCSWIEVEN 516
+ M++ ++K G SWIE+E+
Sbjct: 700 SSMKKHDVKKIPGQSWIEIED 720
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 220/452 (48%), Gaps = 52/452 (11%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
+++H +IL S + ++ ++ Y K SL DA ++F +P+ ++VS+ S+I+GY Q+
Sbjct: 87 RKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQN 146
Query: 83 GKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIA 142
G+ +A+ L++++ + ++ D ++F S + AC + LG +H++++K ++
Sbjct: 147 GQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ 206
Query: 143 NCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNG-------NLE--LAFGFL 193
N LI MY + + DA VF + KD+ISW+S+IA ++ G +L+ L+FG
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF 266
Query: 194 H--------------RLPNPDTISYNEVINGI--------------------AQFGDIED 219
H L PD Y I+G+ A+ G +
Sbjct: 267 HPNEYIFGSSLKACSSLLRPD---YGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNS 323
Query: 220 AIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAG 279
A + + P+++SWN I+ G N EA+ +F +M+S D + ++L
Sbjct: 324 ARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTK 383
Query: 280 LSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNL--VTWN 337
AL+ GM IHS +IK G A + V ++LL MY+ C + ++F R N V+WN
Sbjct: 384 PMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDF-RNNADSVSWN 442
Query: 338 AMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMT 397
++T ++ +++ LF +L V + +PD +T N+L C +I K+ +
Sbjct: 443 TILTACLQHEQPVEMLRLF-KLMLVSECEPDHITMGNLLRGC--VEISSLKLGSQVHCYS 499
Query: 398 KDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMI 429
G+ P +I + + G + +A+R+
Sbjct: 500 LKTGLAPEQFIKNGLIDMYAKCGSLGQARRIF 531
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 176/416 (42%), Gaps = 44/416 (10%)
Query: 73 NSLISGYVQSGKYRKALNLF-VELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIV 131
N I+ +S YR+AL F + S ++ S + AC SL G IH I+
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 132 KYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGN----LE 187
+ + ++ N ++ MYGKCGS+ DA VF M +++++S+ SVI ++NG +
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 188 LAFGFLHRLPNPDTISYNEVINGIA----------------------------------- 212
L L PD ++ +I A
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 213 QFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDV-PMDEYTFS 271
+F + DA + +P + SW+SI+ G+ EAL EM S V +EY F
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 272 TMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRK 331
+ L + L +G IH IK L + + +L DMY++CG + A +F + R
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP 334
Query: 332 NLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSE 391
+ +WN +I G A NG + + +F Q+++ PD+++ ++L C+ T
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRS-SGFIPDAISLRSLL--CAQTKPMALSQGM 391
Query: 392 YFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSA 447
S +G + C S++ + +++ + + + V W +L+A
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTA 447
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 265 bits (677), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 163/566 (28%), Positives = 286/566 (50%), Gaps = 45/566 (7%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVF--VSTALMGFYRKINSLADAH 58
P+ LL +D Q+H + +K GF +N F VS L+ Y ++ L A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 59 KMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLG 118
+F EIP+ V++N+LI+GY + G Y ++++LF+++ +S ++F+ L A L
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 119 SLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIA 178
LG +H+ V R + N ++D Y K V + +F EM + D +S+N VI+
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 179 ASARNGNLELAFGFLHR-------------------------------------LPNPDT 201
+ ++ E + F L D+
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 202 ISY--NEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQ 259
I + N +++ A+ E+A +I S+P + SW ++++GYV + L LF +M+
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 260 SKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVE 319
++ D+ TF+T+L A ++L G +H+ +I+ G ++ S L+DMY+KCG ++
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 320 IADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAAC 379
A +F + +N V+WNA+I+ +A NGD I F ++ LQPDSV+ L VL AC
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM-IESGLQPDSVSILGVLTAC 563
Query: 380 SHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGV 439
SH ++ +EYF++M+ YGI P +H M+ L+G+ G A++++ E+ F +
Sbjct: 564 SHCGF-VEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI 622
Query: 440 VWRALLSASGACSDLDVARISAAEVIKLEGDSD-YVYVMLCNLYTSHGNWDVASVMRNFM 498
+W ++L+A + +A +A ++ +E D YV + N+Y + G W+ ++ M
Sbjct: 623 MWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAM 682
Query: 499 RERGLRKEAGCSWIEVEN-VAAHSSN 523
RERG++K SW+EV + + SSN
Sbjct: 683 RERGIKKVPAYSWVEVNHKIHVFSSN 708
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/526 (22%), Positives = 228/526 (43%), Gaps = 82/526 (15%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
+++ I+K+GF ++ S ++ + ++ A K++ E+P + VS N++ISG+V++
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 83 G-------------------------------KYRKALNLFVELERSE--IYADAYSFTS 109
G + +A LF ++ RS D +FT+
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 110 ALAACGQLGSLQLGMAIHSKIVKYSLERG--VVIANCLIDMYGKCGSVEDAIGVFGEMID 167
L C +H+ VK + + ++N L+ Y + ++ A +F E+ +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 168 KDIISWNSVIAASARNG----NLELAFGFLHRLPNPDTISYNEVINGIAQFGD------- 216
KD +++N++I ++G ++ L P +++ V+ + D
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 217 ----------------------------IEDAIMILSSMPSPNSSSWNSILTGYVNRNRV 248
+ + M+ MP + S+N +++ Y ++
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 249 PEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASAL 308
+LH F EMQ + F+TMLS A LS+L G +H + D+ + V ++L
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSL 392
Query: 309 LDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPD 368
+DMY+KC E A+ +F+SL ++ V+W A+I+GY + G ++LF +++ +L+ D
Sbjct: 393 VDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG-SNLRAD 451
Query: 369 SVTFLNVL-AACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQR 427
TF VL A+ S + K F + G V ++ + + G + A +
Sbjct: 452 QSTFATVLKASASFASLLLGKQLHAFIIRS---GNLENVFSGSGLVDMYAKCGSIKDAVQ 508
Query: 428 MIRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIK--LEGDS 471
+ E+ V W AL+SA D + A + A++I+ L+ DS
Sbjct: 509 VFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDS 553
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 265 bits (677), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 154/492 (31%), Positives = 252/492 (51%), Gaps = 36/492 (7%)
Query: 27 CYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSGKYR 86
C + L N++ ++ Y K L A +F +P+ VVSWN+++ GY Q G
Sbjct: 102 CKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLH 161
Query: 87 KALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCLI 146
+AL + E RS I + +SF L AC + LQL H +++ VV++ +I
Sbjct: 162 EALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSII 221
Query: 147 DMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPNPDTISYNE 206
D Y KCG +E A F EM KDI W ++I+
Sbjct: 222 DAYAKCGQMESAKRCFDEMTVKDIHIWTTLIS---------------------------- 253
Query: 207 VINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMD 266
G A+ GD+E A + MP N SW +++ GYV + AL LF +M + V +
Sbjct: 254 ---GYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPE 310
Query: 267 EYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFR 326
++TFS+ L A +++L G IH +I+ + + +V S+L+DMYSK G +E ++ +FR
Sbjct: 311 QFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR 370
Query: 327 SLC--RKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDI 384
+C + + V WN MI+ A++G K + + + + R +QP+ T + +L ACSH+ +
Sbjct: 371 -ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR-VQPNRTTLVVILNACSHSGL 428
Query: 385 PFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRAL 444
++ +FESMT +GI P EH +I L+G+ G R I E+ F +W A+
Sbjct: 429 -VEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAI 487
Query: 445 LSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGLR 504
L + ++ + +A E+IKL+ +S Y++L ++Y HG W++ +R M++R +
Sbjct: 488 LGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVN 547
Query: 505 KEAGCSWIEVEN 516
KE SWIE+E
Sbjct: 548 KEKAVSWIEIEK 559
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 170/407 (41%), Gaps = 66/407 (16%)
Query: 73 NSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVK 132
S +S + + +A++ L + I S L CG SL+ G IH +
Sbjct: 15 QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKI 74
Query: 133 YSLER-GVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFG 191
+R +++N LI MY KCG DA VF +M +++ SWN++++ ++G L A
Sbjct: 75 TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARV 134
Query: 192 FLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEA 251
+P D +S+N ++ G AQ G++ EA
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLH-------------------------------EA 163
Query: 252 LHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDM 311
L + E + + +E++F+ +L+ L H V+ G +++V++ +++D
Sbjct: 164 LWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 312 YSKCGQ-------------------------------VEIADSMFRSLCRKNLVTWNAMI 340
Y+KCGQ +E A+ +F + KN V+W A+I
Sbjct: 224 YAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALI 283
Query: 341 TGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDY 400
GY R G + ++LF ++ + ++P+ TF + L C+ I + +
Sbjct: 284 AGYVRQGSGNRALDLFRKMIAL-GVKPEQFTFSSCL--CASASIASLRHGKEIHGYMIRT 340
Query: 401 GIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSA 447
++P S+I + + G + ++R+ R V W ++SA
Sbjct: 341 NVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISA 387
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 36/262 (13%)
Query: 2 NEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMF 61
NE+ LL A +Q H +L +GFLSNV +S +++ Y K + A + F
Sbjct: 178 NEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCF 237
Query: 62 VEIPQPSVVSWNSLIS-------------------------------GYVQSGKYRKALN 90
E+ + W +LIS GYV+ G +AL+
Sbjct: 238 DEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALD 297
Query: 91 LFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYG 150
LF ++ + + ++F+S L A + SL+ G IH +++ ++ ++ + LIDMY
Sbjct: 298 LFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYS 357
Query: 151 KCGSVEDAIGVFGEMIDK-DIISWNSVIAASARNGNLELAFGFLHRL----PNPDTISYN 205
K GS+E + VF DK D + WN++I+A A++G A L + P+ +
Sbjct: 358 KSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV 417
Query: 206 EVINGIAQFGDIEDAIMILSSM 227
++N + G +E+ + SM
Sbjct: 418 VILNACSHSGLVEEGLRWFESM 439
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 3/192 (1%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P ++ L AS+ + + +++H Y++++ N V ++L+ Y K SL + ++
Sbjct: 309 PEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERV 368
Query: 61 F-VEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGS 119
F + + V WN++IS Q G KAL + ++ + + + + L AC G
Sbjct: 369 FRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGL 428
Query: 120 LQLGMA-IHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEM-IDKDIISWNSVI 177
++ G+ S V++ + CLID+ G+ G ++ + EM + D WN+++
Sbjct: 429 VEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAIL 488
Query: 178 AASARNGNLELA 189
+GN EL
Sbjct: 489 GVCRIHGNEELG 500
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 265 bits (676), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 158/519 (30%), Positives = 268/519 (51%), Gaps = 49/519 (9%)
Query: 6 LFHLLRASSDLGWDT----YCQ----QLHCYILKSGFLSNVFVSTALMGFYRKINSLADA 57
+F + +D+ W+ Y Q + C + KS + L+G + K + +A
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEA 238
Query: 58 HKMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQL 117
+ F + VVSWN++I+GY QSGK +A LF E D +++T+ ++
Sbjct: 239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVS----- 289
Query: 118 GSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVI 177
G +Q M VE+A +F +M +++ +SWN+++
Sbjct: 290 GYIQNRM------------------------------VEEARELFDKMPERNEVSWNAML 319
Query: 178 AASARNGNLELAFGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNS 237
A + +E+A +P + ++N +I G AQ G I +A + MP + SW +
Sbjct: 320 AGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAA 379
Query: 238 ILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQG 297
++ GY EAL LF +M+ + ++ +FS+ LS A + AL G +H ++K G
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Query: 298 LDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFE 357
+ V +ALL MY KCG +E A+ +F+ + K++V+WN MI GY+R+G + FE
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 499
Query: 358 QLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMG 417
+K L+PD T + VL+ACSHT + DK +YF +MT+DYG+ P +H M+ L+G
Sbjct: 500 SMKR-EGLKPDDATMVAVLSACSHTGL-VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLG 557
Query: 418 QKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVM 477
+ G + A +++ + F +W LL AS + ++A +A ++ +E ++ +YV+
Sbjct: 558 RAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVL 617
Query: 478 LCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVEN 516
L NLY S G W +R MR++G++K G SWIE++N
Sbjct: 618 LSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQN 656
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 180/354 (50%), Gaps = 22/354 (6%)
Query: 48 YRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSF 107
Y + +A ++F +P+ S VS+N +ISGY+++G++ A LF E+ D S+
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSW 129
Query: 108 TSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMID 167
+ G + + LG A ++ + ER V N ++ Y + G V+DA VF M +
Sbjct: 130 NVMIK--GYVRNRNLGKA--RELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE 185
Query: 168 KDIISWNSVIAASARNGNLELAFGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSM 227
K+ +SWN++++A +N +E A N +S+N ++ G + I +A SM
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 228 PSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGM 287
+ SWN+I+TGY ++ EA LF E +DV +T++ M+SG +
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV----FTWTAMVSGYIQNRMVEEAR 301
Query: 288 LIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNG 347
+ + ++ + V +A+L Y + ++E+A +F + +N+ TWN MITGYA+ G
Sbjct: 302 ELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCG 357
Query: 348 DLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYG 401
+++ LF+++ + D V++ ++A S + F+ + F M ++ G
Sbjct: 358 KISEAKNLFDKMP-----KRDPVSWAAMIAGYSQSGHSFEAL-RLFVQMEREGG 405
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 133/283 (46%), Gaps = 27/283 (9%)
Query: 92 FVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHS-----------KIVKYSLERGVV 140
F L+R+ S T L CG + +AI S ++ K V
Sbjct: 37 FHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSV 96
Query: 141 IANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPNPD 200
N +I Y + G E A +F EM ++D++SWN +I RN NL A +P D
Sbjct: 97 SYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERD 156
Query: 201 TISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQS 260
S+N +++G AQ G ++DA + MP N SWN++L+ YV +++ EA LF ++
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN 216
Query: 261 KDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDA----SIVVASALLDMYSKCG 316
+ +++ +L G + +Q D+ +V + ++ Y++ G
Sbjct: 217 WAL----VSWNCLLGGFVKKKKIV--------EARQFFDSMNVRDVVSWNTIITGYAQSG 264
Query: 317 QVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQL 359
+++ A +F +++ TW AM++GY +N + + ELF+++
Sbjct: 265 KIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 265 bits (676), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 162/553 (29%), Positives = 279/553 (50%), Gaps = 68/553 (12%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ +VL +L + ++L +Q+HC SG + FV ++ Y + + DA K+
Sbjct: 114 PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKV 173
Query: 61 FVEIP-----------------------------------QPSVVSWNSLISGYVQSGKY 85
F + + ++VSWN ++SG+ +SG +
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYH 233
Query: 86 RKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCL 145
++A+ +F ++ D + +S L + G L +G IH ++K L + + + +
Sbjct: 234 KEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAM 293
Query: 146 IDMYGKCGSVEDAIGVFG--EMIDKDIISWNSVIAASARNGNLELAFGFLHRLPNPDTIS 203
IDMYGK G V I +F EM++ + N+ I +RNG ++ A
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMMEAGVC--NAYITGLSRNGLVDKA-------------- 337
Query: 204 YNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDV 263
+ F ++ M L N SW SI+ G + EAL LF EMQ V
Sbjct: 338 -------LEMFELFKEQTMEL------NVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 264 PMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADS 323
+ T +ML ++AL G H ++ L ++ V SAL+DMY+KCG++ ++
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 324 MFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTD 383
+F + KNLV WN+++ G++ +G +V+ +FE L R L+PD ++F ++L+AC
Sbjct: 445 VFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR-LKPDFISFTSLLSACGQVG 503
Query: 384 IPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRA 443
+ D+ +YF+ M+++YGIKP +EH M+ L+G+ G++ A +I+E+ F VW A
Sbjct: 504 LT-DEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGA 562
Query: 444 LLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGL 503
LL++ +++D+A I+A ++ LE ++ YV+L N+Y + G W +RN M GL
Sbjct: 563 LLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGL 622
Query: 504 RKEAGCSWIEVEN 516
+K GCSWI+V+N
Sbjct: 623 KKNPGCSWIQVKN 635
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 221/497 (44%), Gaps = 67/497 (13%)
Query: 24 QLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSG 83
Q H ILKSG ++ ++S L+ Y N DA + IP P++ S++SLI ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 84 KYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIAN 143
+ +++ +F + + D++ + C +L + ++G IH L+ +
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 144 CLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPNPDTIS 203
+ MY +CG + DA VF M DKD+++ ++++ A AR G L
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCL----------------- 198
Query: 204 YNEVINGIAQFGDIEDAIMILSSMPS----PNSSSWNSILTGYVNRNRVPEALHLFGEMQ 259
E+ + ILS M S N SWN IL+G+ EA+ +F ++
Sbjct: 199 --------------EEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 260 SKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVE 319
D+ T S++L + L G LIH VIKQGL V SA++DMY K G V
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 320 IADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAAC 379
S+F NA ITG +RNG + K +E+FE K + ++ + V++ +++A C
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKE-QTMELNVVSWTSIIAGC 363
Query: 380 SHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFG--SY 437
+ + + E F M + G+KP SM+ G I LG G ++
Sbjct: 364 AQNGKDIEAL-ELFREM-QVAGVKPNHVTIPSMLPACGN----------IAALGHGRSTH 411
Query: 438 GVVWR-----------ALLSASGACSDLDVARISAAEVIKLEGDSDYV-YVMLCNLYTSH 485
G R AL+ C +++++I V + + V + L N ++ H
Sbjct: 412 GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI----VFNMMPTKNLVCWNSLMNGFSMH 467
Query: 486 GNW-DVASVMRNFMRER 501
G +V S+ + MR R
Sbjct: 468 GKAKEVMSIFESLMRTR 484
>sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protein At1g53600,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2
SV=2
Length = 717
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/478 (31%), Positives = 260/478 (54%), Gaps = 9/478 (1%)
Query: 48 YRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVEL-ERSEIYADAYS 106
Y K+ + DA +F + + +V++W ++I GY ++G + LF+ + + ++ ++ +
Sbjct: 218 YCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNT 277
Query: 107 FTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMI 166
AC + G IH + + LE + + N L+ MY K G + +A VFG M
Sbjct: 278 LAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK 337
Query: 167 DKDIISWNSVIAASARNGNLELAFGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSS 226
+KD +SWNS+I + + A+ ++P D +S+ ++I G + G+I + +
Sbjct: 338 NKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 227 MPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWG 286
MP ++ +W ++++ +V+ EAL F +M K+V + YTFS++LS A L+ L G
Sbjct: 398 MPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457
Query: 287 MLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARN 346
+ IH V+K + + V ++L+ MY KCG A +F + N+V++N MI+GY+ N
Sbjct: 458 LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYN 517
Query: 347 GDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTV 406
G K ++LF L++ +P+ VTFL +L+AC H D +YF+SM Y I+P
Sbjct: 518 GFGKKALKLFSMLES-SGKEPNGVTFLALLSACVHVGY-VDLGWKYFKSMKSSYNIEPGP 575
Query: 407 EHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIK 466
+H M+ L+G+ G + A +I + + VW +LLSAS +D+A ++A ++I+
Sbjct: 576 DHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIE 635
Query: 467 LEGDSDYVYVMLCNLYTSHG-NWDVASVMRNFMRERGLRKEAGCSWI----EVENVAA 519
LE DS YV+L LY+ G N D +M N + + ++K+ G SWI EV N A
Sbjct: 636 LEPDSATPYVVLSQLYSIIGKNRDCDRIM-NIKKSKRIKKDPGSSWIILKGEVHNFLA 692
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 205/469 (43%), Gaps = 27/469 (5%)
Query: 34 FLSNVFVSTALMGFYRKIN------SLADAHKMFVEIPQPSVVSWNSLISGYVQSGKYRK 87
FL STA+ +I+ +L +A +F ++ S+VSW ++IS Y ++GK K
Sbjct: 40 FLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSK 99
Query: 88 ALNLFVELERSEIYADAYSFTSALAACGQLG-SLQLGMAIHSKIVKYSLERGVVIANCLI 146
A +F E+ + T+ + LG + +L I E+ V +I
Sbjct: 100 AWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIP--------EKNAVSYATMI 151
Query: 147 DMYGKCGSVEDAIGVFGEMIDK--DIISWNSVIAASARNGNLELAFGFLHRLPNPDTISY 204
+ + G ++A ++ E K D ++ N +++ R G A + + +S
Sbjct: 152 TGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSC 211
Query: 205 NEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEM-QSKDV 263
+ +++G + G I DA + M N +W +++ GY + LF M Q DV
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 264 PMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADS 323
++ T + M G IH V + L+ + + ++L+ MYSK G + A +
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 324 MFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTD 383
+F + K+ V+WN++ITG + +++ ELFE++ D V++ +++ S
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG-----KDMVSWTDMIKGFSGKG 386
Query: 384 IPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRA 443
K E F M + I T + ++ W + + +E+ SY + +
Sbjct: 387 -EISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSY--TFSS 443
Query: 444 LLSASGACSDLDVARISAAEVIKLEGDSDY-VYVMLCNLYTSHGNWDVA 491
+LSA+ + +DL V+K+ +D V L ++Y GN + A
Sbjct: 444 VLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDA 492
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 104/191 (54%), Gaps = 2/191 (1%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
PN Y +L A++ L Q+H ++K ++++ V +L+ Y K + DA+K+
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F I +P++VS+N++ISGY +G +KAL LF LE S + +F + L+AC +G +
Sbjct: 496 FSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYV 555
Query: 121 QLGMA-IHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIIS-WNSVIA 178
LG S Y++E G C++D+ G+ G ++DA + M K W S+++
Sbjct: 556 DLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLS 615
Query: 179 ASARNGNLELA 189
AS + ++LA
Sbjct: 616 ASKTHLRVDLA 626
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 177/395 (44%), Gaps = 39/395 (9%)
Query: 2 NEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMF 61
N L + +A D Q+H + + ++F+ +LM Y K+ + +A +F
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 62 VEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYA-----DAYSFTSALAACGQ 116
+ VSWNSLI+G VQ + +A LF ++ ++ + +S ++ C +
Sbjct: 334 GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVE 393
Query: 117 LGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDII----S 172
L GM E+ + +I + G E+A+ F +M+ K++ +
Sbjct: 394 L----FGMMP---------EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYT 440
Query: 173 WNSVIAASARNGNLELAFGFLHRLPNPDTIS----YNEVINGIAQFGDIEDAIMILSSMP 228
++SV++A+A +L R+ + ++ N +++ + G+ DA I S +
Sbjct: 441 FSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS 500
Query: 229 SPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGI--AGLSALTWG 286
PN S+N++++GY +AL LF ++S + TF +LS G L W
Sbjct: 501 EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK 560
Query: 287 M---LIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSL-CRKNLVTWNAMITG 342
+ S I+ G D + ++D+ + G ++ A ++ ++ C+ + W ++++
Sbjct: 561 YFKSMKSSYNIEPGPDH----YACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSA 616
Query: 343 YARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLA 377
++ + EL K + +L+PDS T VL+
Sbjct: 617 -SKTHLRVDLAEL--AAKKLIELEPDSATPYVVLS 648
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/506 (30%), Positives = 266/506 (52%), Gaps = 42/506 (8%)
Query: 19 DTYC------QQLHCYILKSGFLSNVFVSTALMGFY-RKINSLADAHKMFVEIPQPSVVS 71
DT C +Q+H ++K+G +S+ ++ ++ F + + A+ +F I +
Sbjct: 32 DTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFV 91
Query: 72 WNSLISGYVQSGKYRKALNLFVEL--ERSEIYADAYSFTSALAACGQLGSLQLGMAIHSK 129
WN++I G+ +S A+++F+++ + ++ S A G+LG + G +H
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGM 151
Query: 130 IVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELA 189
++K LE I N ++ MY CG + +A +F MI D+++WNS+I
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIM----------- 200
Query: 190 FGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVP 249
G A+ G I+ A + MP N SWNS+++G+V R
Sbjct: 201 --------------------GFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFK 240
Query: 250 EALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALL 309
+AL +F EMQ KDV D +T ++L+ A L A G IH +++ + + +V +AL+
Sbjct: 241 DALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALI 300
Query: 310 DMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDS 369
DMY KCG +E ++F +K L WN+MI G A NG + ++LF +L+ L+PDS
Sbjct: 301 DMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELER-SGLEPDS 359
Query: 370 VTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMI 429
V+F+ VL AC+H+ + E+F M + Y I+P+++H M+ ++G G + A+ +I
Sbjct: 360 VSFIGVLTACAHSG-EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALI 418
Query: 430 RELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWD 489
+ + V+W +LLSA ++++A+ +A + KL+ D YV+L N Y S+G ++
Sbjct: 419 KNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFE 478
Query: 490 VASVMRNFMRERGLRKEAGCSWIEVE 515
A R M+ER + KE GCS IEV+
Sbjct: 479 EAVEQRLLMKERQMEKEVGCSSIEVD 504
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 156/365 (42%), Gaps = 60/365 (16%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P + +A LG +QLH ++K G + F+ ++ Y L +A ++
Sbjct: 124 PQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRI 183
Query: 61 FVEIPQPSVVSWNS-------------------------------LISGYVQSGKYRKAL 89
F+ + VV+WNS +ISG+V++G+++ AL
Sbjct: 184 FLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDAL 243
Query: 90 NLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCLIDMY 149
++F E++ ++ D ++ S L AC LG+ + G IH IV+ E ++ LIDMY
Sbjct: 244 DMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMY 303
Query: 150 GKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLP----NPDTISYN 205
KCG +E+ + VF K + WNS+I A NG E A L PD++S+
Sbjct: 304 CKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFI 363
Query: 206 EVINGIAQFGDIEDA-----IMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQS 260
V+ A G++ A +M M P+ + ++ + EA L
Sbjct: 364 GVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALI----- 418
Query: 261 KDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASAL--LDMYSKCGQV 318
K++P++E T + W L+ +C ++ + A L LD CG V
Sbjct: 419 KNMPVEEDT-------------VIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYV 465
Query: 319 EIADS 323
++++
Sbjct: 466 LLSNA 470
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ + + LL A + LG + +H YI+++ F N V TAL+ Y K + + +
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F P+ + WNS+I G +G +A++LF ELERS + D+ SF L AC G +
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEV 375
Query: 121 QLGMAIHSKIV-KYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEM-IDKDIISWNSVIA 178
+ KY +E + ++++ G G +E+A + M +++D + W+S+++
Sbjct: 376 HRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLS 435
Query: 179 ASARNGNLEL---AFGFLHRLPNPDTISYNEVINGIAQFGDIEDAI 221
A + GN+E+ A L +L +T Y + N A +G E+A+
Sbjct: 436 ACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAV 481
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 263 bits (672), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 170/570 (29%), Positives = 291/570 (51%), Gaps = 61/570 (10%)
Query: 1 PNEYVLFHLLRASSDLGWDT---YCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADA 57
P+ + L ++ A S+L +Q+H Y L+ G L N F+ L+ Y K+ LA +
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASS 255
Query: 58 HKMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQL 117
+ +V+WN+++S Q+ + +AL E+ + D ++ +S L AC L
Sbjct: 256 KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315
Query: 118 GSLQLGMAIHSKIVKY-SLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSV 176
L+ G +H+ +K SL+ + + L+DMY C V VF M D+ I WN++
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375
Query: 177 IAASARNGN----------LELAFGFL------------------------------HRL 196
IA ++N + +E + G L R
Sbjct: 376 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG 435
Query: 197 PNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFG 256
+ D N +++ ++ G I+ A+ I M + +WN+++TGYV +AL L
Sbjct: 436 LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLH 495
Query: 257 EMQSKD-----------VPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVA 305
+MQ+ + + + T T+L A LSAL G IH+ IK L + V
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG 555
Query: 306 SALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDL 365
SAL+DMY+KCG ++++ +F + +KN++TWN +I Y +G+ + I+L ++ V+ +
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLL-RMMMVQGV 614
Query: 366 QPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRA 425
+P+ VTF++V AACSH+ + D+ F M DYG++P+ +H ++ L+G+ G + A
Sbjct: 615 KPNEVTFISVFAACSHSGM-VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673
Query: 426 QRMIREL--GFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYT 483
+++ + F G W +LL AS ++L++ I+A +I+LE + YV+L N+Y+
Sbjct: 674 YQLMNMMPRDFNKAG-AWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 732
Query: 484 SHGNWDVASVMRNFMRERGLRKEAGCSWIE 513
S G WD A+ +R M+E+G+RKE GCSWIE
Sbjct: 733 SAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 199/435 (45%), Gaps = 56/435 (12%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGF-LSNVFVSTALMGFYRKINSLADAHK 59
P+ Y LL+A +DL +Q+H ++ K G+ + +V V+ L+ YRK +K
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 154
Query: 60 MFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGS 119
+F I + + VSWNSLIS K+ AL F + + +++ S + AC L
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL-P 213
Query: 120 LQLGMAIHSKIVKYSLERGVV---IANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSV 176
+ G+ + ++ Y L +G + I N L+ MYGK G + + + G +D+++WN+V
Sbjct: 214 MPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 177 IAASARNGNLELAFGFLHRL----PNPDTISYNEVINGIAQF----------------GD 216
+++ +N L A +L + PD + + V+ + G
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 217 IEDAIMILSS--------------------MPSPNSSSWNSILTGYVNRNRVPEALHLF- 255
+++ + S+ M WN+++ GY EAL LF
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 256 GEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKC 315
G +S + + T + ++ A + IH V+K+GLD V + L+DMYS+
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 316 GQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVR----------DL 365
G+++IA +F + ++LVTWN MITGY + + L +++ + L
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 366 QPDSVTFLNVLAACS 380
+P+S+T + +L +C+
Sbjct: 514 KPNSITLMTILPSCA 528
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 159/351 (45%), Gaps = 43/351 (12%)
Query: 72 WNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIV 131
W L+ V+S R+A+ +V++ I D Y+F + L A L ++LG IH+ +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 132 KYSLE-RGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAF 190
K+ V +AN L+++Y KCG VF + +++ +SWNS+I++ E+A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 191 GFLH----------------------RLPNPDTISYNE---------------VINGI-- 211
LP P+ + + +IN +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 212 --AQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYT 269
+ G + + ++L S + +WN++L+ ++ EAL EM + V DE+T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 270 FSTMLSGIAGLSALTWGMLIHSCVIKQG-LDASIVVASALLDMYSKCGQVEIADSMFRSL 328
S++L + L L G +H+ +K G LD + V SAL+DMY C QV +F +
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 329 CRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAAC 379
+ + WNAMI GY++N + + LF ++ L +S T V+ AC
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Query: 235 WNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVI 294
W +L V N + EA+ + +M + D Y F +L +A L + G IH+ V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 295 KQGLDA-SIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVI 353
K G S+ VA+ L+++Y KCG +F + +N V+WN++I+ +
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 354 ELFEQLKTVRDLQPDSVTFLNVLAACSHTDIP 385
E F + +++P S T ++V+ ACS+ +P
Sbjct: 185 EAFRCMLD-ENVEPSSFTLVSVVTACSNLPMP 215
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 263 bits (671), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 172/567 (30%), Positives = 287/567 (50%), Gaps = 47/567 (8%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
PN + + +A + L C+ +H +++KS F S+VFV TA + + K NS+ A K+
Sbjct: 50 PNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKV 109
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F +P+ +WN+++SG+ QSG KA +LF E+ +EI D+ + + + + SL
Sbjct: 110 FERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSL 169
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMI---DKDIISWNSVI 177
+L A+H+ ++ ++ V +AN I YGKCG ++ A VF E I D+ ++SWNS+
Sbjct: 170 KLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVF-EAIDRGDRTVVSWNSMF 228
Query: 178 AASARNGNLELAFGFLHRL-------------------PNPDTISYNEVING-------- 210
A + G AFG + NP+T++ +I+
Sbjct: 229 KAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTD 288
Query: 211 ---------IAQFGDIED---AIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEM 258
I+ + ED A ++ M S SW +++GY + + EAL LF M
Sbjct: 289 QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM 348
Query: 259 QSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDA-SIVVASALLDMYSKCGQ 317
D T +++SG +L G I + G ++++ +AL+DMYSKCG
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGS 408
Query: 318 VEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLA 377
+ A +F + K +VTW MI GYA NG + ++LF ++ + D +P+ +TFL VL
Sbjct: 409 IHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL-DYKPNHITFLAVLQ 467
Query: 378 ACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSY 437
AC+H+ +K EYF M + Y I P ++H M+ L+G+KG++ A +IR +
Sbjct: 468 ACAHSG-SLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPD 526
Query: 438 GVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNF 497
+W ALL+A ++ +A +A + LE YV + N+Y + G WD + +R+
Sbjct: 527 AGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSI 586
Query: 498 MRERGLRKEAGCSWIEVENVAAHSSNI 524
M++R ++K G S I+V N HS +
Sbjct: 587 MKQRNIKKYPGESVIQV-NGKNHSFTV 612
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 172/401 (42%), Gaps = 45/401 (11%)
Query: 68 SVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIH 127
SV +WN I V ++L LF E++R + ++F AC +L + +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 128 SKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLE 187
+ ++K V + +DM+ KC SV+ A VF M ++D +WN++++ ++G+ +
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 188 LAFGFLHRLP----NPDTISY-----------------------------------NEVI 208
AF + PD+++ N I
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 209 NGIAQFGDIEDAIMILSSMPSPNSS--SWNSILTGYVNRNRVPEALHLFGEMQSKDVPMD 266
+ + GD++ A ++ ++ + + SWNS+ Y +A L+ M ++ D
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 255
Query: 267 EYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFR 326
TF + + LT G LIHS I G D I + + MYSK A +F
Sbjct: 256 LSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 315
Query: 327 SLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPF 386
+ + V+W MI+GYA GD+ + + LF + + +PD VT L++++ C
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGE-KPDLVTLLSLISGCG--KFGS 372
Query: 387 DKVSEYFESMTKDYGIK-PTVEHCCSMIRLMGQKGEVWRAQ 426
+ ++ ++ YG K V C ++I + + G + A+
Sbjct: 373 LETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEAR 413
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 111/219 (50%), Gaps = 10/219 (4%)
Query: 233 SSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSC 292
++WN + VNRN E+L LF EM+ + +TF + A L+ + ++H+
Sbjct: 18 NAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 293 VIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKV 352
+IK + + V +A +DM+ KC V+ A +F + ++ TWNAM++G+ ++G K
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 353 IELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTK---DYGIKPTVEHC 409
LF +++ + ++ PDSVT + ++ + S F+K + E+M G+ V
Sbjct: 138 FSLFREMR-LNEITPDSVTVMTLIQSAS-----FEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 410 CSMIRLMGQKGEVWRAQRMIRELGFGSYGVV-WRALLSA 447
+ I G+ G++ A+ + + G VV W ++ A
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKA 230
>sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protein At2g37310
OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1
Length = 657
Score = 262 bits (670), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/508 (29%), Positives = 259/508 (50%), Gaps = 34/508 (6%)
Query: 10 LRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSV 69
L D + +Q+H ++++ GF S+VFV ++ +Y K +++ A K+F E+ + V
Sbjct: 139 LSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV 198
Query: 70 VSWNSLISGYVQSGKYRKALNLF-VELERSEIYADAYSFTSALAACGQLGSLQLGMAIHS 128
VSWNS+ISGY QSG + ++ L S+ + + S ACGQ L G+ +H
Sbjct: 199 VSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHK 258
Query: 129 KIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLEL 188
K+++ ++ + + N +I Y KCG +L+
Sbjct: 259 KMIENHIQMDLSLCNAVIGFYAKCG-------------------------------SLDY 287
Query: 189 AFGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRV 248
A + D+++Y +I+G G +++A+ + S M S S+WN++++G + N
Sbjct: 288 ARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHH 347
Query: 249 PEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASAL 308
E ++ F EM + T S++L + S L G IH+ I+ G D +I V +++
Sbjct: 348 EEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSI 407
Query: 309 LDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPD 368
+D Y+K G + A +F + ++L+ W A+IT YA +GD LF+Q++ + +PD
Sbjct: 408 IDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCL-GTKPD 466
Query: 369 SVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRM 428
VT VL+A +H+ D F+SM Y I+P VEH M+ ++ + G++ A
Sbjct: 467 DVTLTAVLSAFAHSGDS-DMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEF 525
Query: 429 IRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNW 488
I ++ VW ALL+ + DL++AR + + ++E ++ Y ++ NLYT G W
Sbjct: 526 ISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRW 585
Query: 489 DVASVMRNFMRERGLRKEAGCSWIEVEN 516
+ A ++RN M+ GL+K G SWIE E
Sbjct: 586 EEAEMVRNKMKRIGLKKIPGTSWIETEK 613
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 124/264 (46%), Gaps = 28/264 (10%)
Query: 194 HRLP---------------NPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSI 238
HRLP PD +++I+ + A+ + + N+ S+N++
Sbjct: 35 HRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNAL 94
Query: 239 LTGYVNRNRVPEALHLF-----GEMQSKDVPM-DEYTFSTMLSGIAGLSALTWGML---I 289
L Y +R +A LF S D D + S +L ++G G L +
Sbjct: 95 LIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQV 154
Query: 290 HSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDL 349
H VI+ G D+ + V + ++ Y+KC +E A +F + +++V+WN+MI+GY+++G
Sbjct: 155 HGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSF 214
Query: 350 TKVIELFEQLKTVRDLQPDSVTFLNVLAACSH-TDIPFDKVSEYFESMTKDYGIKPTVEH 408
++++ + D +P+ VT ++V AC +D+ F E + M +++ I+ +
Sbjct: 215 EDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGL--EVHKKMIENH-IQMDLSL 271
Query: 409 CCSMIRLMGQKGEVWRAQRMIREL 432
C ++I + G + A+ + E+
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEM 295
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 147/354 (41%), Gaps = 64/354 (18%)
Query: 1 PNEYVLFHLLRA---SSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADA 57
PN + + +A SSDL + ++H ++++ ++ + A++GFY K SL A
Sbjct: 232 PNGVTVISVFQACGQSSDL---IFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYA 288
Query: 58 HKMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELE--------------------- 96
+F E+ + V++ ++ISGY+ G ++A+ LF E+E
Sbjct: 289 RALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHE 348
Query: 97 ----------RSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCLI 146
R + + +S L + +L+ G IH+ ++ + + + +I
Sbjct: 349 EVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSII 408
Query: 147 DMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRL----PNPDTI 202
D Y K G + A VF D+ +I+W ++I A A +G+ + A ++ PD +
Sbjct: 409 DNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDV 468
Query: 203 SYNEVINGIAQFGDIEDAIMILSSMPS-----PNSSSWNSILTGYVNRNRVPEALHLFGE 257
+ V++ A GD + A I SM + P + +++ ++ +A+ +
Sbjct: 469 TLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISK 528
Query: 258 MQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDM 311
M P+D A WG L++ + L+ + L +M
Sbjct: 529 M-----PIDPI-------------AKVWGALLNGASVLGDLEIARFACDRLFEM 564
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 262 bits (669), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 163/554 (29%), Positives = 279/554 (50%), Gaps = 44/554 (7%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ Y +LR + +++H ++++ G+ ++ V AL+ Y K + A +
Sbjct: 194 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F +P+ ++SWN++ISGY ++G + L LF + + D + TS ++AC LG
Sbjct: 254 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDR 313
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
+LG IH+ ++ + + N L MY GS +A +F M KDI+SW ++I+
Sbjct: 314 RLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY 373
Query: 181 ARNGNLELAFGFLHRLPN----PDTISYNEVINGIAQFGD-------------------- 216
N + A + PD I+ V++ A GD
Sbjct: 374 EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV 433
Query: 217 ---------------IEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSK 261
I+ A+ I ++P N SW SI+ G NR EAL +M+
Sbjct: 434 IVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT 493
Query: 262 DVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIA 321
P + T + L+ A + AL G IH+ V++ G+ + +ALLDMY +CG++ A
Sbjct: 494 LQP-NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTA 552
Query: 322 DSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSH 381
S F S +K++ +WN ++TGY+ G + V+ELF+++ R ++PD +TF+++L CS
Sbjct: 553 WSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSR-VRPDEITFISLLCGCSK 610
Query: 382 TDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVW 441
+ + + YF M +DYG+ P ++H ++ L+G+ GE+ A + I+++ VW
Sbjct: 611 SQMVRQGLM-YFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 668
Query: 442 RALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRER 501
ALL+A +D+ +SA + +L+ S Y++LCNLY G W + +R M+E
Sbjct: 669 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKEN 728
Query: 502 GLRKEAGCSWIEVE 515
GL +AGCSW+EV+
Sbjct: 729 GLTVDAGCSWVEVK 742
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 176/372 (47%), Gaps = 44/372 (11%)
Query: 38 VFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVE-LE 96
V + A + + + +L DA +F ++ + ++ SWN L+ GY + G + +A+ L+ L
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 97 RSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVE 156
+ D Y+F L CG + L G +H +V+Y E + + N LI MY KCG V+
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVK 248
Query: 157 DAIGVFGEMIDKDIISWNSVIAASARNG----NLELAFGFLHRLPNPDTISYNEVINGIA 212
A +F M +DIISWN++I+ NG LEL F +PD ++ VI+
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 213 QFGDI-----------------------------------EDAIMILSSMPSPNSSSWNS 237
GD +A + S M + SW +
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 238 ILTGYVNRNRVPE-ALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQ 296
+++GY N +P+ A+ + M V DE T + +LS A L L G+ +H IK
Sbjct: 369 MISGY-EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 297 GLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELF 356
L + ++VA+ L++MYSKC ++ A +F ++ RKN+++W ++I G N + +
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFL 487
Query: 357 EQLKTVRDLQPD 368
Q+K LQP+
Sbjct: 488 RQMKMT--LQPN 497
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 151/345 (43%), Gaps = 41/345 (11%)
Query: 76 ISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSL 135
+ G +GK +A+ L ++ + D F + + C + + G ++S +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 136 ERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHR 195
GV + N + M+ + G++ DA VFG+M ++++ SWN ++ A+ G + A HR
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 196 L-----PNPDTISY-----------------------------------NEVINGIAQFG 215
+ PD ++ N +I + G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 216 DIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLS 275
D++ A ++ MP + SWN++++GY E L LF M+ V D T ++++S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 276 GIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVT 335
L G IH+ VI G I V ++L MY G A+ +F + RK++V+
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 336 WNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACS 380
W MI+GY N K I+ + + ++PD +T VL+AC+
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQ-DSVKPDEITVAAVLSACA 409
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 6/218 (2%)
Query: 239 LTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGL 298
L G ++ EA+ L MQ V +DE F ++ A G ++S +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 299 DASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQ 358
+ + +A L M+ + G + A +F + +NL +WN ++ GYA+ G + + L+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 359 LKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQ 418
+ V ++PD TF VL C IP + YG + ++ ++I + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCG--GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 419 KGEVWRAQRMIRELGFGSYGVVWRALLSA---SGACSD 453
G+V A+ + + + W A++S +G C +
Sbjct: 244 CGDVKSARLLFDRMPRRDI-ISWNAMISGYFENGMCHE 280
>sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein At2g35030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2
SV=1
Length = 627
Score = 262 bits (669), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 266/486 (54%), Gaps = 21/486 (4%)
Query: 36 SNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVEL 95
NV TA++ Y + L+ A +F E+P+ +VVSWN++I GY QSG+ KAL LF E+
Sbjct: 107 KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 96 ERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSV 155
I S+ S + A Q G + M + ++ + R VV ++D K G V
Sbjct: 167 PERNIV----SWNSMVKALVQRGRIDEAMNLFERMPR----RDVVSWTAMVDGLAKNGKV 218
Query: 156 EDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPNPDTISYNEVINGIAQFG 215
++A +F M +++IISWN++I A+N ++ A +P D S+N +I G +
Sbjct: 219 DEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNR 278
Query: 216 DIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEM-QSKDVPMDEYTFSTML 274
++ A + MP N SW +++TGYV EAL++F +M + V + T+ ++L
Sbjct: 279 EMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSIL 338
Query: 275 SGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRS--LCRKN 332
S + L+ L G IH + K + +V SALL+MYSK G++ A MF + +C+++
Sbjct: 339 SACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRD 398
Query: 333 LVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEY 392
L++WN+MI YA +G + IE++ Q++ +P +VT+LN+L ACSH + +K E+
Sbjct: 399 LISWNSMIAVYAHHGHGKEAIEMYNQMRK-HGFKPSAVTYLNLLFACSHAGL-VEKGMEF 456
Query: 393 FESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIR----ELGFGSYGVVWRALLSAS 448
F+ + +D + EH ++ L G+ G + I L YG A+LSA
Sbjct: 457 FKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYG----AILSAC 512
Query: 449 GACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAG 508
+++ +A+ +V++ D YV++ N+Y ++G + A+ MR M+E+GL+K+ G
Sbjct: 513 NVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPG 572
Query: 509 CSWIEV 514
CSW++V
Sbjct: 573 CSWVKV 578
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
PN +L A SDL QQ+H I KS N V++AL+ Y K L A KM
Sbjct: 329 PNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKM 388
Query: 61 FVE--IPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLG 118
F + Q ++SWNS+I+ Y G ++A+ ++ ++ + A ++ + L AC G
Sbjct: 389 FDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAG 448
Query: 119 SLQLGMAIHSKIVK-YSLERGVVIANCLIDMYGKCGSVED 157
++ GM +V+ SL CL+D+ G+ G ++D
Sbjct: 449 LVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKD 488
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 261 bits (668), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 150/503 (29%), Positives = 262/503 (52%), Gaps = 36/503 (7%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLAD--AHKMFVEIPQPSVVSWNSLISGYV 80
+Q+H ++L+ G + ++ T L+ K+ D A ++ + + W ++I GY
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 81 QSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVV 140
GK+ +A+ ++ + + EI +++F++ L ACG + L LG H++ + V
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVY 185
Query: 141 IANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPNPD 200
+ N +IDMY KC S++ A VF EM P D
Sbjct: 186 VGNTMIDMYVKCESIDCARKVFDEM-------------------------------PERD 214
Query: 201 TISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQS 260
IS+ E+I A+ G++E A + S+P+ + +W +++TG+ + EAL F M+
Sbjct: 215 VISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEK 274
Query: 261 KDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDAS--IVVASALLDMYSKCGQV 318
+ DE T + +S A L A + K G S +V+ SAL+DMYSKCG V
Sbjct: 275 SGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNV 334
Query: 319 EIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAA 378
E A ++F S+ KN+ T+++MI G A +G + + LF + T +++P++VTF+ L A
Sbjct: 335 EEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMA 394
Query: 379 CSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYG 438
CSH+ + D+ + F+SM + +G++PT +H M+ L+G+ G + A +I+ + +G
Sbjct: 395 CSHSGL-VDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHG 453
Query: 439 VVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFM 498
VW ALL A ++ ++A I+A + +LE D Y++L N+Y S G+W +R +
Sbjct: 454 GVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLI 513
Query: 499 RERGLRKEAGCSWIEVENVAAHS 521
+E+GL+K SW+ +N H
Sbjct: 514 KEKGLKKTPAVSWVVDKNGQMHK 536
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 267 EYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCG--QVEIADSM 324
E S+++S + L IH V+++GLD S + + L+ +K G A +
Sbjct: 46 ELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRV 105
Query: 325 FRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAAC 379
+ +N W A+I GYA G + I ++ ++ ++ P S TF +L AC
Sbjct: 106 IEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRK-EEITPVSFTFSALLKAC 159
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 258 bits (659), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 157/522 (30%), Positives = 275/522 (52%), Gaps = 38/522 (7%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ + L +L++ L +++H Y +K+G + +VS +LMG Y + + HK+
Sbjct: 44 PDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKV 103
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVEL-ERSEIYADAYSFTSALAACGQLGS 119
F E+PQ VVSWN LIS YV +G++ A+ +F + + S + D + S L+AC L +
Sbjct: 104 FDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKN 163
Query: 120 LQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAA 179
L++G I+ + V E V I N L+DM+ KCG ++ A VF M DK++ W S++
Sbjct: 164 LEIGERIY-RFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMV-- 220
Query: 180 SARNGNLELAFGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSIL 239
FG++ G I++A ++ P + W +++
Sbjct: 221 ----------FGYV-------------------STGRIDEARVLFERSPVKDVVLWTAMM 251
Query: 240 TGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLD 299
GYV NR EAL LF MQ+ + D + ++L+G A AL G IH + + +
Sbjct: 252 NGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVT 311
Query: 300 ASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQL 359
VV +AL+DMY+KCG +E A +F + ++ +W ++I G A NG + ++L+ ++
Sbjct: 312 VDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM 371
Query: 360 KTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQK 419
+ V ++ D++TF+ VL AC+H + + F SMT+ + ++P EHC +I L+ +
Sbjct: 372 ENV-GVRLDAITFVAVLTACNHGGFVAEG-RKIFHSMTERHNVQPKSEHCSCLIDLLCRA 429
Query: 420 GEVWRAQRMIRELGFGSYGV---VWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYV 476
G + A+ +I ++ S V+ +LLSA+ ++ +A A ++ K+E +
Sbjct: 430 GLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHT 489
Query: 477 MLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVENVA 518
+L ++Y S W+ + +R M++ G+RK GCS IE++ V
Sbjct: 490 LLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVG 531
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 87/159 (54%)
Query: 222 MILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLS 281
M +S + +P+ +N +L + + L LFGE++ + + D +T +L I L
Sbjct: 1 MNMSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLR 60
Query: 282 ALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMIT 341
+ G +H +K GL+ V+++L+ MY+ G++EI +F + ++++V+WN +I+
Sbjct: 61 KVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLIS 120
Query: 342 GYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACS 380
Y NG I +F+++ +L+ D T ++ L+ACS
Sbjct: 121 SYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACS 159
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/519 (29%), Positives = 266/519 (51%), Gaps = 34/519 (6%)
Query: 1 PNEYVLFHLLRASSDLGWDTYC-QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHK 59
P+ + LL G C ++LHC+++K G SN++V AL+ Y + A
Sbjct: 132 PDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARG 191
Query: 60 MFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGS 119
+F + V SWN +ISGY + +Y +++ L VE+ER+ + + + L+AC ++
Sbjct: 192 VFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKD 251
Query: 120 LQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAA 179
L +H + + E + + N L++ Y CG ++ A+ +F M
Sbjct: 252 KDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSM-------------- 297
Query: 180 SARNGNLELAFGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSIL 239
AR D IS+ ++ G + G+++ A MP + SW ++
Sbjct: 298 KAR-----------------DVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMI 340
Query: 240 TGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLD 299
GY+ E+L +F EMQS + DE+T ++L+ A L +L G I + + K +
Sbjct: 341 DGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIK 400
Query: 300 ASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQL 359
+VV +AL+DMY KCG E A +F + +++ TW AM+ G A NG + I++F Q+
Sbjct: 401 NDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQM 460
Query: 360 KTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQK 419
+ + +QPD +T+L VL+AC+H+ + D+ ++F M D+ I+P++ H M+ ++G+
Sbjct: 461 QDM-SIQPDDITYLGVLSACNHSGM-VDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRA 518
Query: 420 GEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLC 479
G V A ++R++ +VW ALL AS +D +A ++A ++++LE D+ VY +LC
Sbjct: 519 GLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLC 578
Query: 480 NLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVENVA 518
N+Y W +R + + ++K G S IEV A
Sbjct: 579 NIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFA 617
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 97/168 (57%), Gaps = 4/168 (2%)
Query: 215 GDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTML 274
G + A + +P P+ WN+++ G+ + E + L+ M + V D +TF +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 275 SGIA-GLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNL 333
+G+ AL G +H V+K GL +++ V +AL+ MYS CG +++A +F C++++
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 334 VTWNAMITGYARNGDLTKVIELFEQLKTVRDL-QPDSVTFLNVLAACS 380
+WN MI+GY R + + IEL +++ R+L P SVT L VL+ACS
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEME--RNLVSPTSVTLLLVLSACS 247
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/512 (30%), Positives = 265/512 (51%), Gaps = 17/512 (3%)
Query: 19 DTY-----CQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWN 73
DTY + +H I+ N + LM Y + +A A K+F EIP+ +V+ N
Sbjct: 50 DTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIIN 109
Query: 74 SLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKY 133
+I YV +G Y + + +F + + D Y+F L AC G++ +G IH K
Sbjct: 110 VMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV 169
Query: 134 SLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFL 193
L + + N L+ MYGKCG + +A V EM +D++SWNS++ A+N + A
Sbjct: 170 GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVC 229
Query: 194 HRLP----NPDTISYNEVINGIAQFGDIEDAIMI---LSSMPSPNSSSWNSILTGYVNRN 246
+ + D + ++ ++ E+ + + M + SWN ++ G +N
Sbjct: 230 REMESVKISHDAGTMASLLPAVSN-TTTENVMYVKDMFFKMGKKSLVSWN-VMIGVYMKN 287
Query: 247 RVP-EALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVA 305
+P EA+ L+ M++ D + +++L SAL+ G IH + ++ L ++++
Sbjct: 288 AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 347
Query: 306 SALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDL 365
+AL+DMY+KCG +E A +F ++ +++V+W AMI+ Y +G + LF +L+ L
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQD-SGL 406
Query: 366 QPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRA 425
PDS+ F+ LAACSH + ++ F+ MT Y I P +EH M+ L+G+ G+V A
Sbjct: 407 VPDSIAFVTTLAACSHAGL-LEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 426 QRMIRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSH 485
R I+++ VW ALL A SD D+ ++A ++ +L + YV+L N+Y
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 486 GNWDVASVMRNFMRERGLRKEAGCSWIEVENV 517
G W+ + +RN M+ +GL+K G S +EV +
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRI 557
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 158/350 (45%), Gaps = 12/350 (3%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ Y +L+A S G +++H K G S +FV L+ Y K L++A +
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
E+ + VVSWNSL+ GY Q+ ++ AL + E+E +I DA + S L A +
Sbjct: 198 LDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTE 257
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEM----IDKDIISWNSV 176
+ M + K ++ +V N +I +Y K +A+ ++ M + D +S SV
Sbjct: 258 NV-MYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 177 IAASARNGNLELA---FGFLHRLP-NPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNS 232
+ A L L G++ R P+ + N +I+ A+ G +E A + +M S +
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Query: 233 SSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSC 292
SW ++++ Y R +A+ LF ++Q + D F T L+ + L G
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL 435
Query: 293 VIKQ-GLDASIVVASALLDMYSKCGQVEIADSMFRSLC-RKNLVTWNAMI 340
+ + + + ++D+ + G+V+ A + + N W A++
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL 485
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 24/277 (8%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ + +L A D + +++H YI + + N+ + AL+ Y K L A +
Sbjct: 307 PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDV 366
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F + VVSW ++IS Y SG+ A+ LF +L+ S + D+ +F + LAAC G L
Sbjct: 367 FENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLL 426
Query: 121 QLG------MAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEM-IDKDIISW 173
+ G M H KI LE C++D+ G+ G V++A +M ++ + W
Sbjct: 427 EEGRSCFKLMTDHYKITP-RLEH----LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVW 481
Query: 174 NSVIAASARNGNLE---LAFGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMI------- 223
+++ A + + + LA L +L + Y + N A+ G E+ I
Sbjct: 482 GALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSK 541
Query: 224 -LSSMPSPNSSSWNSILTGYVNRNRV-PEALHLFGEM 258
L P ++ N I+ ++ +R P++ ++ E+
Sbjct: 542 GLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYREL 578
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 271/553 (49%), Gaps = 54/553 (9%)
Query: 11 RASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVV 70
R DLG + LH ++ +G VF+ L+ Y K L A +F + V
Sbjct: 161 RCDLDLG-----ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQV 215
Query: 71 SWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACG---QLGSLQLGMAIH 127
SWNSLISGYV+ G + LNL ++ R + Y+ S L AC G ++ GMAIH
Sbjct: 216 SWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIH 275
Query: 128 SKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAA-------- 179
K +E +V+ L+DMY K GS+++AI +F M K+++++N++I+
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEIT 335
Query: 180 -SARNGNLELAFGFLHR--LPNPDTIS-------------YNEVINGI------------ 211
A + +L R P+P T S Y I+ +
Sbjct: 336 DEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFI 395
Query: 212 --------AQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDV 263
A G ED + +S + +SW S++ +V ++ A LF ++ S +
Sbjct: 396 GSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHI 455
Query: 264 PMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADS 323
+EYT S M+S A +AL+ G I IK G+DA V ++ + MY+K G + +A+
Sbjct: 456 RPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQ 515
Query: 324 MFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTD 383
+F + ++ T++AMI+ A++G + + +FE +KT ++P+ FL VL AC H
Sbjct: 516 VFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKT-HGIKPNQQAFLGVLIACCHGG 574
Query: 384 IPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRA 443
+ + +YF+ M DY I P +H ++ L+G+ G + A+ +I GF + V WRA
Sbjct: 575 LVTQGL-KYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRA 633
Query: 444 LLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGL 503
LLS+ D + + A +++LE ++ YV+L N+Y G A +R MR+RG+
Sbjct: 634 LLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGV 693
Query: 504 RKEAGCSWIEVEN 516
+KE SWI + N
Sbjct: 694 KKEPALSWIVIGN 706
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 195/402 (48%), Gaps = 48/402 (11%)
Query: 26 HCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSGKY 85
H +++KS +++ L+ Y K L A ++F +P+ +++S+NSLISGY Q G Y
Sbjct: 70 HGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFY 129
Query: 86 RKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCL 145
+A+ LF+E + + D +++ AL CG+ L LG +H +V L + V + N L
Sbjct: 130 EQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVL 189
Query: 146 IDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPNP------ 199
IDMY KCG ++ A+ +F ++D +SWNS+I+ R G E L ++
Sbjct: 190 IDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTT 249
Query: 200 ------------------------------------DTISYNEVINGIAQFGDIEDAIMI 223
D + +++ A+ G +++AI +
Sbjct: 250 YALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKL 309
Query: 224 LSSMPSPNSSSWNSILTGYVNRNRVP-----EALHLFGEMQSKDVPMDEYTFSTMLSGIA 278
S MPS N ++N++++G++ + + EA LF +MQ + + TFS +L +
Sbjct: 310 FSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACS 369
Query: 279 GLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNA 338
L +G IH+ + K + + SAL+++Y+ G E F S ++++ +W +
Sbjct: 370 AAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTS 429
Query: 339 MITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACS 380
MI + +N L +LF QL + ++P+ T +++AC+
Sbjct: 430 MIDCHVQNEQLESAFDLFRQLFSSH-IRPEEYTVSLMMSACA 470
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 177/371 (47%), Gaps = 55/371 (14%)
Query: 57 AHKMFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQ 116
A F I Q S+V+ LI+ V G YR L+ + + + + ++ Y AA +
Sbjct: 7 AKTFFNNIAQDSLVT---LITKRVGLG-YR-FLSSLCQPKNTALDSEGYKILFQTAA--K 59
Query: 117 LGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSV 176
GS+ LG H ++K SL + + N L++MY KC + A +F M +++IIS+NS+
Sbjct: 60 SGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSL 119
Query: 177 IAA---------------SARNGNLEL-------AFGF------------LHRLPNPDTI 202
I+ AR NL+L A GF LH L + +
Sbjct: 120 ISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGL 179
Query: 203 SY-----NEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGE 257
S N +I+ ++ G ++ A+ + + SWNS+++GYV E L+L +
Sbjct: 180 SQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAK 239
Query: 258 MQSKDVPMDEYTFSTMLSGIA---GLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSK 314
M + + Y ++L + GM IH K G++ IVV +ALLDMY+K
Sbjct: 240 MHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAK 299
Query: 315 CGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLT-----KVIELFEQLKTVRDLQPDS 369
G ++ A +F + KN+VT+NAMI+G+ + ++T + +LF ++ R L+P
Sbjct: 300 NGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQR-RGLEPSP 358
Query: 370 VTFLNVLAACS 380
TF VL ACS
Sbjct: 359 STFSVVLKACS 369
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 137/320 (42%), Gaps = 27/320 (8%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ +L+A S Y +Q+H I K+ F S+ F+ +AL+ Y + S D +
Sbjct: 356 PSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC 415
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F + + SW S+I +VQ+ + A +LF +L S I + Y+ + ++AC +L
Sbjct: 416 FASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAAL 475
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
G I +K ++ + I MY K G++ A VF E+ + D+ +++++I++
Sbjct: 476 SSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSL 535
Query: 181 ARNGNLELAFGFLHRLP----NPDTISYNEVINGIAQFGDIEDAIMILSSMP-----SPN 231
A++G+ A + P+ ++ V+ G + + M +PN
Sbjct: 536 AQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPN 595
Query: 232 SSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHS 291
+ ++ R+ +A +L +D P +TW L+ S
Sbjct: 596 EKHFTCLVDLLGRTGRLSDAENLILSSGFQDHP------------------VTWRALLSS 637
Query: 292 CVIKQGLDASIVVASALLDM 311
C + + VA L+++
Sbjct: 638 CRVYKDSVIGKRVAERLMEL 657
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/532 (29%), Positives = 266/532 (50%), Gaps = 48/532 (9%)
Query: 24 QLHCYILKSGFLSNVFVSTALMGFYRKIN-SLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
Q H +++KSG ++ V +L+ Y K+ + + ++F +SW S++SGYV
Sbjct: 82 QFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTG 141
Query: 83 GKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIA 142
++ KAL +FVE+ + A+ ++ +SA+ AC +LG ++LG H ++ + E I+
Sbjct: 142 KEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFIS 201
Query: 143 NCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARN------------------- 183
+ L +YG DA VF EM + D+I W +V++A ++N
Sbjct: 202 STLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGL 261
Query: 184 -------GNLELAFGFLHRLPNPDTISYNEVINGI--------------AQFGDIEDAIM 222
G + A G L RL I + NGI + G + +A
Sbjct: 262 VPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQ 321
Query: 223 ILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSA 282
+ + M NS SW+++L GY +A+ +F EM+ KD+ Y F T+L AGL+A
Sbjct: 322 VFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAA 377
Query: 283 LTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITG 342
+ G IH +++G +++V SAL+D+Y K G ++ A ++ + +N++TWNAM++
Sbjct: 378 VRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSA 437
Query: 343 YARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGI 402
A+NG + + F + + ++PD ++F+ +L AC HT + D+ YF M K YGI
Sbjct: 438 LAQNGRGEEAVSFFNDM-VKKGIKPDYISFIAILTACGHTGM-VDEGRNYFVLMAKSYGI 495
Query: 403 KPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLD-VARISA 461
KP EH MI L+G+ G A+ ++ + +W LL A +D VA A
Sbjct: 496 KPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIA 555
Query: 462 AEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIE 513
+++LE YV+L N+Y + G A +R M RG+ K G SWI+
Sbjct: 556 KRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 186/408 (45%), Gaps = 48/408 (11%)
Query: 2 NEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMF 61
NE+ L ++A S+LG + H ++ GF N F+S+ L Y DA ++F
Sbjct: 162 NEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVF 221
Query: 62 VEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSE-IYADAYSFTSALAACGQLGSL 120
E+P+P V+ W +++S + ++ Y +AL LF + R + + D +F + L ACG L L
Sbjct: 222 DEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRL 281
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
+ G IH K++ + VV+ + L+DMYGKCGSV +A VF M K+ +SW++++
Sbjct: 282 KQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGY 341
Query: 181 ARNGNLELAFGFLHRLPNPDTISYNEVINGIAQ-------------------FGD----- 216
+NG E A + D + V+ A FG+
Sbjct: 342 CQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVES 401
Query: 217 -----------IEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPM 265
I+ A + S M N +WN++L+ R EA+ F +M K +
Sbjct: 402 ALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKP 461
Query: 266 DEYTFSTMLSGIAGLSALTWG-----MLIHSCVIKQGLDASIVVASALLDMYSKCGQVEI 320
D +F +L+ + G ++ S IK G + S ++D+ + G E
Sbjct: 462 DYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHY----SCMIDLLGRAGLFEE 517
Query: 321 ADSMF-RSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQP 367
A+++ R+ CR + W ++ A N D ++V E K + +L+P
Sbjct: 518 AENLLERAECRNDASLWGVLLGPCAANADASRVAERIA--KRMMELEP 563
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 179/406 (44%), Gaps = 49/406 (12%)
Query: 83 GKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIA 142
G+ +A+ + SEI A + S L C ++ S G+ H+ +VK LE +
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 143 NCLIDMYGKCG-SVEDAIGVFGEMIDKDIISWNSVIAASARNGN----LELAFGFLHRLP 197
N L+ +Y K G + + VF KD ISW S+++ LE+ +
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 198 NPDTISYNEVINGIAQFGDIE-----------------------------------DAIM 222
+ + + + + ++ G++ DA
Sbjct: 160 DANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARR 219
Query: 223 ILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEM-QSKDVPMDEYTFSTMLSGIAGLS 281
+ MP P+ W ++L+ + + EAL LF M + K + D TF T+L+ L
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 282 ALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMIT 341
L G IH +I G+ +++VV S+LLDMY KCG V A +F + +KN V+W+A++
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLG 339
Query: 342 GYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYG 401
GY +NG+ K IE+F +++ + D F VL AC+ + ++ + G
Sbjct: 340 GYCQNGEHEKAIEIFREME-----EKDLYCFGTVLKACA--GLAAVRLGKEIHGQYVRRG 392
Query: 402 IKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSA 447
V ++I L G+ G + A R+ ++ + + W A+LSA
Sbjct: 393 CFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNM-ITWNAMLSA 437
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 105/231 (45%), Gaps = 5/231 (2%)
Query: 218 EDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGI 277
+ A + L+ S ++ + S + ++ EA+ + S ++P ++++L
Sbjct: 12 QHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTC 71
Query: 278 AGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQ-VEIADSMFRSLCRKNLVTW 336
+ + G+ H+ V+K GL+ V ++LL +Y K G + +F K+ ++W
Sbjct: 72 NKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISW 131
Query: 337 NAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESM 396
+M++GY + K +E+F ++ + L + T + + ACS ++ ++ F +
Sbjct: 132 TSMMSGYVTGKEHVKALEVFVEMVSF-GLDANEFTLSSAVKACS--ELGEVRLGRCFHGV 188
Query: 397 TKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSA 447
+G + ++ L G E A+R+ E+ + W A+LSA
Sbjct: 189 VITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDV-ICWTAVLSA 238
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/559 (28%), Positives = 278/559 (49%), Gaps = 47/559 (8%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
PN Y L + +A S L T +Q H ++K +++V T+L+G Y K + D K+
Sbjct: 116 PNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKV 175
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKAL---NLFVELERSEIYADAYSFTSALAACGQL 117
F +P+ + +W++++SGY G+ +A+ NLF+ E+ E Y FT+ L++
Sbjct: 176 FAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR-EKEEGSDSDYVFTAVLSSLAAT 234
Query: 118 GSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVI 177
+ LG IH +K L V ++N L+ MY KC S+ +A +F D++ I+W++++
Sbjct: 235 IYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294
Query: 178 AASARNGNLELAFGFLHRL------PNPDTI----------------------------- 202
++NG A R+ P+ TI
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 203 ----SYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEM 258
+ +++ A+ G + DA + + + W S+++GYV + EAL L+ M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 259 QSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQV 318
++ + ++ T +++L + L+ L G +H IK G + + SAL MYSKCG +
Sbjct: 415 KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSL 474
Query: 319 EIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAA 378
E + +FR K++V+WNAMI+G + NG + +ELFE++ ++PD VTF+N+++A
Sbjct: 475 EDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM-LAEGMEPDDVTFVNIISA 533
Query: 379 CSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYG 438
CSH ++ YF M+ G+ P V+H M+ L+ + G++ A+ I
Sbjct: 534 CSHKGF-VERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGL 592
Query: 439 VVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNW-DVASVMRNF 497
+WR LLSA ++ + +++ L YV L +YT+ G DV V ++
Sbjct: 593 CLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKH- 651
Query: 498 MRERGLRKEAGCSWIEVEN 516
MR G+ KE GCSWIE++N
Sbjct: 652 MRANGVSKEVGCSWIELKN 670
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 191/402 (47%), Gaps = 45/402 (11%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
+ +H I+++G + + + L+ FY K LA AH +F I VVSWNSLI+GY Q+
Sbjct: 34 RAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQN 93
Query: 83 GKYRKA---LNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGV 139
G + + LF E+ +I +AY+ A L S +G H+ +VK S +
Sbjct: 94 GGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDI 153
Query: 140 VIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELA---FGFLHRL 196
+ L+ MY K G VED + VF M +++ +W+++++ A G +E A F R
Sbjct: 154 YVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLRE 213
Query: 197 PNPDTIS---YNEVI---------------------NGIAQFGDIEDAIM---------- 222
+ S + V+ NG+ F + +A++
Sbjct: 214 KEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLN 273
Query: 223 ----ILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIA 278
+ S NS +W++++TGY EA+ LF M S + EYT +L+ +
Sbjct: 274 EACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACS 333
Query: 279 GLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNA 338
+ L G +HS ++K G + + +AL+DMY+K G + A F L +++ W +
Sbjct: 334 DICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTS 393
Query: 339 MITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACS 380
+I+GY +N D + + L+ ++KT + P+ T +VL ACS
Sbjct: 394 LISGYVQNSDNEEALILYRRMKTA-GIIPNDPTMASVLKACS 434
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 185/375 (49%), Gaps = 47/375 (12%)
Query: 97 RSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVE 156
++E+ + L Q +L G A+H +I++ + AN L++ Y KCG +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 157 DAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHR---------LPNPDTIS---- 203
A +F +I KD++SWNS+I ++NG + ++ + LPN T++
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 204 -------------YNEVINGIAQFGDI----------------EDAIMILSSMPSPNSSS 234
+ ++ ++ FGDI ED + + + MP N+ +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 235 WNSILTGYVNRNRVPEALHLFGE-MQSKDVPMD-EYTFSTMLSGIAGLSALTWGMLIHSC 292
W+++++GY R RV EA+ +F ++ K+ D +Y F+ +LS +A + G IH
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCI 246
Query: 293 VIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKV 352
IK GL + +++AL+ MYSKC + A MF S +N +TW+AM+TGY++NG+ +
Sbjct: 247 TIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEA 306
Query: 353 IELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSM 412
++LF ++ + ++P T + VL ACS DI + + + S G + + ++
Sbjct: 307 VKLFSRMFSA-GIKPSEYTIVGVLNACS--DICYLEEGKQLHSFLLKLGFERHLFATTAL 363
Query: 413 IRLMGQKGEVWRAQR 427
+ + + G + A++
Sbjct: 364 VDMYAKAGCLADARK 378
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/583 (29%), Positives = 288/583 (49%), Gaps = 78/583 (13%)
Query: 9 LLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPS 68
L++ + + + +QLH +++ LS+ S ++ Y + L +A +F + P
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLLFKTLKSPP 69
Query: 69 VVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHS 128
V++W S+I + + KAL FVE+ S D F S L +C + L+ G ++H
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 129 KIVKYSLERGVVIANCLIDMYGK---------CGSVEDAIG------------------- 160
IV+ ++ + N L++MY K G+V D +
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 161 --------VFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRL------PNPDTIS--- 203
VF M KD++S+N++IA A++G E A + + P+ T+S
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
Query: 204 -----YNEVING-------------------------IAQFGDIEDAIMILSSMPSPNSS 233
Y +VI G A+ IED+ + S + +
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 234 SWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCV 293
SWNS++ GYV R EAL LF +M + V FS+++ A L+ L G +H V
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 294 IKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVI 353
++ G ++I +ASAL+DMYSKCG ++ A +F + + V+W A+I G+A +G + +
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429
Query: 354 ELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMI 413
LFE++K + ++P+ V F+ VL ACSH + D+ YF SMTK YG+ +EH ++
Sbjct: 430 SLFEEMKR-QGVKPNQVAFVAVLTACSHVGL-VDEAWGYFNSMTKVYGLNQELEHYAAVA 487
Query: 414 RLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDY 473
L+G+ G++ A I ++ G VW LLS+ +L++A A ++ ++ ++
Sbjct: 488 DLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMG 547
Query: 474 VYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVEN 516
YV++CN+Y S+G W + +R MR++GLRK+ CSWIE++N
Sbjct: 548 AYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKN 590
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 159/318 (50%), Gaps = 17/318 (5%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ + L +L S+ +++H Y+++ G S+V++ ++L+ Y K + D+ ++
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F + +SWNSL++GYVQ+G+Y +AL LF ++ +++ A +F+S + AC L +L
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
LG +H +++ + IA+ L+DMY KCG+++ A +F M D +SW ++I
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 419
Query: 181 ARNGNLELAFGFLHRLP----NPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWN 236
A +G+ A + P+ +++ V+ + G +++A +SM N
Sbjct: 420 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM--TKVYGLN 477
Query: 237 SILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQ 296
L Y V + L G+++ + Y F + + + W L+ SC + +
Sbjct: 478 QELEHYAA---VADLLGRAGKLE------EAYNFISKM--CVEPTGSVWSTLLSSCSVHK 526
Query: 297 GLDASIVVASALLDMYSK 314
L+ + VA + + S+
Sbjct: 527 NLELAEKVAEKIFTVDSE 544
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 256 bits (653), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 154/555 (27%), Positives = 284/555 (51%), Gaps = 43/555 (7%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
PNE+ LL ASS LG + + + +H I+ G NV + T+L+ FY + + + DA ++
Sbjct: 223 PNEFTFVKLLGASSFLGLE-FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRV 281
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
+ V W S++SG+V++ + ++A+ F+E+ + + +++++ L+ C + SL
Sbjct: 282 LNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSL 341
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVE-DAIGVFGEMIDKDIISWNSVIAA 179
G IHS+ +K E + N L+DMY KC + E +A VFG M+ +++SW ++I
Sbjct: 342 DFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILG 401
Query: 180 SARNGNLELAFGFLHRL------PNPDTISY----------------------------- 204
+G ++ FG L + PN T+S
Sbjct: 402 LVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGE 461
Query: 205 ----NEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQS 260
N +++ A ++ A ++ SM ++ ++ S++T + + AL + M
Sbjct: 462 MVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYG 521
Query: 261 KDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEI 320
+ MD+ + +S A L AL G +H +K G + V ++L+DMYSKCG +E
Sbjct: 522 DGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLED 581
Query: 321 ADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACS 380
A +F + ++V+WN +++G A NG ++ + FE+++ +++ +PDSVTFL +L+ACS
Sbjct: 582 AKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMR-MKETEPDSVTFLILLSACS 640
Query: 381 HTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVV 440
+ + D EYF+ M K Y I+P VEH ++ ++G+ G + A ++ + ++
Sbjct: 641 NGRLT-DLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMI 699
Query: 441 WRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRE 500
++ LL A +L + A + + L +Y++L +LY G ++A RN M E
Sbjct: 700 FKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTE 759
Query: 501 RGLRKEAGCSWIEVE 515
+ L K+ G S +EV+
Sbjct: 760 KRLSKKLGKSTVEVQ 774
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 197/396 (49%), Gaps = 40/396 (10%)
Query: 24 QLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSG 83
+HC ++K G L N+ + L+ Y K + + +A K+F E+ +V +W +IS + +S
Sbjct: 44 HIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQ 103
Query: 84 KYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIAN 143
++ AL+LF E+ S + + ++F+S + +C L + G +H ++K E V+ +
Sbjct: 104 EFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGS 163
Query: 144 CLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRL------P 197
L D+Y KCG ++A +F + + D ISW +I++ A F + P
Sbjct: 164 SLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPP 223
Query: 198 NP------------------DTISYNEVINGI--------------AQFGDIEDAIMILS 225
N TI N ++ GI +QF +EDA+ +L+
Sbjct: 224 NEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN 283
Query: 226 SMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTW 285
S + W S+++G+V R EA+ F EM+S + + +T+S +LS + + +L +
Sbjct: 284 SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDF 343
Query: 286 GMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEI-ADSMFRSLCRKNLVTWNAMITGYA 344
G IHS IK G + S V +AL+DMY KC E+ A +F ++ N+V+W +I G
Sbjct: 344 GKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLV 403
Query: 345 RNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACS 380
+G + L ++ R+++P+ VT VL ACS
Sbjct: 404 DHGFVQDCFGLLMEM-VKREVEPNVVTLSGVLRACS 438
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 187/387 (48%), Gaps = 41/387 (10%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
PNE+ ++R+ + L +Y ++H ++K+GF N V ++L Y K +A ++
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F + +SW +IS V + K+R+AL + E+ ++ + + ++F L A LG L
Sbjct: 182 FSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-L 240
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAAS 180
+ G IHS I+ + VV+ L+D Y + +EDA+ V ++D+ W SV++
Sbjct: 241 EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGF 300
Query: 181 ARNGNLELAFGFLHRLPN----PDTISYNEVIN---------------------GIAQFG 215
RN + A G + + P+ +Y+ +++ G
Sbjct: 301 VRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDST 360
Query: 216 DIEDAIM---------------ILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQS 260
D+ +A++ + +M SPN SW +++ G V+ V + L EM
Sbjct: 361 DVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVK 420
Query: 261 KDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEI 320
++V + T S +L + L + + IH+ ++++ +D +VV ++L+D Y+ +V+
Sbjct: 421 REVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDY 480
Query: 321 ADSMFRSLCRKNLVTWNAMITGYARNG 347
A ++ RS+ R++ +T+ +++T + G
Sbjct: 481 AWNVIRSMKRRDNITYTSLVTRFNELG 507
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 145/301 (48%), Gaps = 41/301 (13%)
Query: 119 SLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIA 178
S ++G+ IH ++K+ L + + N L+ +Y K + +A +F EM + + +W +I+
Sbjct: 38 SSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMIS 97
Query: 179 ASARNGNLELAFGFLHRL----PNPDTISYNEVINGIAQFGDI----------------- 217
A ++ A + +P+ +++ V+ A DI
Sbjct: 98 AFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEG 157
Query: 218 ------------------EDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQ 259
++A + SS+ + ++ SW +++ V + EAL + EM
Sbjct: 158 NSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMV 217
Query: 260 SKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVE 319
VP +E+TF +L G + L +G IHS +I +G+ ++V+ ++L+D YS+ ++E
Sbjct: 218 KAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKME 276
Query: 320 IADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAAC 379
A + S +++ W ++++G+ RN + + F +++++ LQP++ T+ +L+ C
Sbjct: 277 DAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSL-GLQPNNFTYSAILSLC 335
Query: 380 S 380
S
Sbjct: 336 S 336
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 1/171 (0%)
Query: 219 DAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIA 278
+A + M +W +++ + AL LF EM + +E+TFS+++ A
Sbjct: 76 NARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCA 135
Query: 279 GLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNA 338
GL +++G +H VIK G + + VV S+L D+YSKCGQ + A +F SL + ++W
Sbjct: 136 GLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTM 195
Query: 339 MITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKV 389
MI+ + ++ + ++ + P+ TF+ +L A S + F K
Sbjct: 196 MISSLVGARKWREALQFYSEMVKA-GVPPNEFTFVKLLGASSFLGLEFGKT 245
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 255 bits (652), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 148/488 (30%), Positives = 259/488 (53%), Gaps = 9/488 (1%)
Query: 20 TYCQQLHCYILKSGFLSNVFVSTALMGFYR---KINSLADAHKMFVEIPQPSVVSWNSLI 76
T QQ H ++LK+G + F ++ L+ F + +++ AH + I P+ + NS+I
Sbjct: 53 TEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVI 112
Query: 77 SGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLE 136
Y S AL +F E+ ++ D YSFT L AC + G IH +K L
Sbjct: 113 RAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLV 172
Query: 137 RGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRL 196
V + N L+++YG+ G E A V M +D +SWNS+++A G ++ A +
Sbjct: 173 TDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEM 232
Query: 197 PNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFG 256
+ S+N +I+G A G +++A + SMP + SWN+++T Y + E L +F
Sbjct: 233 EERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFN 292
Query: 257 EM--QSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSK 314
+M S + P D +T ++LS A L +L+ G +H + K G++ +A+AL+DMYSK
Sbjct: 293 KMLDDSTEKP-DGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSK 351
Query: 315 CGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLN 374
CG+++ A +FR+ ++++ TWN++I+ + +G +E+F ++ +P+ +TF+
Sbjct: 352 CGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEM-VYEGFKPNGITFIG 410
Query: 375 VLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGF 434
VL+AC+H + D+ + FE M+ Y ++PT+EH M+ L+G+ G++ A+ ++ E+
Sbjct: 411 VLSACNHVGM-LDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPA 469
Query: 435 GSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWD-VASV 493
++ +LL A L+ A A +++L Y + NLY S G W+ V
Sbjct: 470 DEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDG 529
Query: 494 MRNFMRER 501
RN ER
Sbjct: 530 RRNMRAER 537
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 5/226 (2%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ + L +L A + LG + + +H YI K G F++TAL+ Y K + A ++
Sbjct: 302 PDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEV 361
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F + V +WNS+IS G + AL +F E+ + +F L+AC +G L
Sbjct: 362 FRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGML 421
Query: 121 QLGMAIHSKIVK-YSLERGVVIANCLIDMYGKCGSVEDAIGVFGEM-IDKDIISWNSVIA 178
+ + Y +E + C++D+ G+ G +E+A + E+ D+ I S++
Sbjct: 422 DQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLG 481
Query: 179 ASARNGNLELAFGFLHRLPN---PDTISYNEVINGIAQFGDIEDAI 221
A R G LE A +RL D+ Y ++ N A G E I
Sbjct: 482 ACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVI 527
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 255 bits (652), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 149/529 (28%), Positives = 274/529 (51%), Gaps = 37/529 (6%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
+QLH I++ ++ ++ L+ A ++F ++ +P+V NSLI + Q+
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 83 GKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIA 142
+ +A +F E++R ++AD +++ L AC L + +H+ I K L + +
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVP 155
Query: 143 NCLIDMYGKCG---------------------------------SVEDAIGVFGEMIDKD 169
N LID Y +CG + DA +F EM +D
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215
Query: 170 IISWNSVIAASARNGNLELAFGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPS 229
+ISWN+++ AR + AF ++P +T+S++ ++ G ++ GD+E A ++ MP
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPL 275
Query: 230 P--NSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGM 287
P N +W I+ GY + + EA L +M + + D ++L+ L+ GM
Sbjct: 276 PAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGM 335
Query: 288 LIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNG 347
IHS + + L ++ V +ALLDMY+KCG ++ A +F + +K+LV+WN M+ G +G
Sbjct: 336 RIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHG 395
Query: 348 DLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVE 407
+ IELF +++ ++PD VTF+ VL +C+H + D+ +YF SM K Y + P VE
Sbjct: 396 HGKEAIELFSRMRR-EGIRPDKVTFIAVLCSCNHAGL-IDEGIDYFYSMEKVYDLVPQVE 453
Query: 408 HCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKL 467
H ++ L+G+ G + A ++++ + V+W ALL A +++D+A+ ++KL
Sbjct: 454 HYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKL 513
Query: 468 EGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVEN 516
+ Y +L N+Y + +W+ + +R+ M+ G+ K +G S +E+E+
Sbjct: 514 DPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELED 562
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 5/226 (2%)
Query: 9 LLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPS 68
+L A ++ G + ++H + +S SN +V AL+ Y K +L A +F +IP+
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 69 VVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHS 128
+VSWN+++ G G ++A+ LF + R I D +F + L +C G + G+
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 129 KIVK-YSLERGVVIANCLIDMYGKCGSVEDAIGVFGEM-IDKDIISWNSVIAASARNGNL 186
+ K Y L V CL+D+ G+ G +++AI V M ++ +++ W +++ A + +
Sbjct: 441 SMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEV 500
Query: 187 ELAFGFLH---RLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPS 229
++A L +L D +Y+ + N A D E I S M S
Sbjct: 501 DIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKS 546
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/534 (28%), Positives = 272/534 (50%), Gaps = 43/534 (8%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
QQ+HC LK G + VS +L+ Y K+ A +F + + ++SWNS+I+G Q+
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 83 GKYRKALNLFVELERSEIYADAYSFTSALAACGQLGS-LQLGMAIHSKIVKYSLERGVVI 141
G +A+ LF++L R + D Y+ TS L A L L L +H +K + +
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454
Query: 142 ANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAA--------------------SA 181
+ LID Y + +++A +F E + D+++WN+++A
Sbjct: 455 STALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE 513
Query: 182 RNGNLELAF-----GFLHRLPNPDTISYNEVINGI--------------AQFGDIEDAIM 222
R+ + LA GFL + + + +G + GD+ A
Sbjct: 514 RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQF 573
Query: 223 ILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSA 282
S+P P+ +W ++++G + A H+F +M+ V DE+T +T+ + L+A
Sbjct: 574 AFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA 633
Query: 283 LTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITG 342
L G IH+ +K V ++L+DMY+KCG ++ A +F+ + N+ WNAM+ G
Sbjct: 634 LEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVG 693
Query: 343 YARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGI 402
A++G+ + ++LF+Q+K++ ++PD VTF+ VL+ACSH+ + + ++ SM DYGI
Sbjct: 694 LAQHGEGKETLQLFKQMKSL-GIKPDKVTFIGVLSACSHSGL-VSEAYKHMRSMHGDYGI 751
Query: 403 KPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAA 462
KP +EH + +G+ G V +A+ +I + + ++R LL+A D + + A
Sbjct: 752 KPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVAT 811
Query: 463 EVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVEN 516
++++LE YV+L N+Y + WD + R M+ ++K+ G SWIEV+N
Sbjct: 812 KLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 865
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 179/357 (50%), Gaps = 19/357 (5%)
Query: 39 FVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQSGK-----YRKALNLFV 93
F+ L+ Y K SL A ++F ++P +VSWNS+++ Y QS + ++A LF
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 94 ELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCG 153
L + +Y + + L C G + + H K L+ +A L+++Y K G
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG 194
Query: 154 SVEDAIGVFGEMIDKDIISWNSVIAASARNG----NLELAFGFLHRLPNPDTISYNEVIN 209
V++ +F EM +D++ WN ++ A G ++L+ F NP+ I+ ++
Sbjct: 195 KVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL-RLLA 253
Query: 210 GIAQFGDIEDAIMILSSMPSPNSSSWNSI------LTGYVNRNRVPEALHLFGEMQSKDV 263
I+ GD DA + S ++SS + I L+ Y++ + L F +M DV
Sbjct: 254 RIS--GDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDV 311
Query: 264 PMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADS 323
D+ TF ML+ + +L G +H +K GLD + V+++L++MY K + A +
Sbjct: 312 ECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFART 371
Query: 324 MFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACS 380
+F ++ ++L++WN++I G A+NG + + LF QL L+PD T +VL A S
Sbjct: 372 VFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC-GLKPDQYTMTSVLKAAS 427
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 160/351 (45%), Gaps = 40/351 (11%)
Query: 69 VVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHS 128
++ N +S Y+ SG+Y L F ++ S++ D +F LA ++ SL LG +H
Sbjct: 280 IIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHC 339
Query: 129 KIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNG-NLE 187
+K L+ + ++N LI+MY K A VF M ++D+ISWNSVIA A+NG +E
Sbjct: 340 MALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVE 399
Query: 188 LAFGFLHRLP---NPDTISYNEVINGIA-----------------QFGDIEDAIM----- 222
F+ L PD + V+ + + ++ D+ +
Sbjct: 400 AVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALI 459
Query: 223 -------------ILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQSKDVPMDEYT 269
IL + + +WN+++ GY + + L LF M + D++T
Sbjct: 460 DAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519
Query: 270 FSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLC 329
+T+ L A+ G +H+ IK G D + V+S +LDMY KCG + A F S+
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 330 RKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAACS 380
+ V W MI+G NG+ + +F Q++ + L PD T + A S
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL-PDEFTIATLAKASS 629
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 161/375 (42%), Gaps = 30/375 (8%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQPSVVSWNSLISGYVQS 82
+ H Y K G + FV+ AL+ Y K + + +F E+P VV WN ++ Y++
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 83 GKYRKALNLFVELERSEIYADAYSF------TSALAACGQLGSLQLGMAIHSKIVKYSLE 136
G +A++L S + + + + + GQ+ S G S
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSV------- 277
Query: 137 RGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDI----ISWNSVIAASARNGNLELA--- 189
++ N + Y G + F +M++ D+ +++ ++A + + +L L
Sbjct: 278 SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQV 337
Query: 190 --FGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNR 247
L T+S N +IN + A + +M + SWNS++ G
Sbjct: 338 HCMALKLGLDLMLTVS-NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGL 396
Query: 248 VPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGL-SALTWGMLIHSCVIKQGLDASIVVAS 306
EA+ LF ++ + D+YT +++L + L L+ +H IK + V++
Sbjct: 397 EVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVST 456
Query: 307 ALLDMYSKCGQVEIADSMFRSLCRKN--LVTWNAMITGYARNGDLTKVIELFEQLKTVRD 364
AL+D YS+ ++ A+ +F R N LV WNAM+ GY ++ D K ++LF + +
Sbjct: 457 ALIDAYSRNRCMKEAEILFE---RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE 513
Query: 365 LQPDSVTFLNVLAAC 379
+ D T V C
Sbjct: 514 -RSDDFTLATVFKTC 527
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 2/189 (1%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+E+ + L +ASS L +Q+H LK ++ FV T+L+ Y K S+ DA+ +
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCL 675
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F I ++ +WN+++ G Q G+ ++ L LF +++ I D +F L+AC G +
Sbjct: 676 FKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLV 735
Query: 121 QLGMA-IHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEM-IDKDIISWNSVIA 178
+ S Y ++ + +CL D G+ G V+ A + M ++ + +++A
Sbjct: 736 SEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLA 795
Query: 179 ASARNGNLE 187
A G+ E
Sbjct: 796 ACRVQGDTE 804
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 9/201 (4%)
Query: 198 NPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNR-----VPEAL 252
NP+ N +I+ ++ G + A + MP + SWNSIL Y + + +A
Sbjct: 71 NPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAF 130
Query: 253 HLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGM-LIHSCVIKQGLDASIVVASALLDM 311
LF ++ V T S ML + S W H K GLD VA AL+++
Sbjct: 131 LLFRILRQDVVYTSRMTLSPMLK-LCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNI 189
Query: 312 YSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVT 371
Y K G+V+ +F + +++V WN M+ Y G + I+L + L P+ +T
Sbjct: 190 YLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHS-SGLNPNEIT 248
Query: 372 FLNVLAACSHTDIPFDKVSEY 392
L +LA S D +V +
Sbjct: 249 -LRLLARISGDDSDAGQVKSF 268
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 47/205 (22%)
Query: 120 LQLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAA 179
L LG H++I+ + + N LI MY KCGS+ A VF +M D+D++SWNS++AA
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 180 SARNG-----NLELAFGFLHRLPNPDTISYNE---------------------------- 206
A++ N++ AF L R+ D + +
Sbjct: 115 YAQSSECVVENIQQAF-LLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 207 ------------VINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHL 254
++N +FG +++ ++ MP + WN +L Y+ EA+ L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 255 FGEMQSKDVPMDEYTFSTMLSGIAG 279
S + +E T +L+ I+G
Sbjct: 234 SSAFHSSGLNPNEITLR-LLARISG 257
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 281 SALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMI 340
S L G H+ ++ + + + L+ MYSKCG + A +F + ++LV+WN+++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 341 TGYARNGDLTKVIELFEQ-LKTVRDLQPDSV-----TFLNVLAACSHTDIPFDKVSEYFE 394
YA++ + V+E +Q R L+ D V T +L C H+ + SE F
Sbjct: 113 AAYAQSSEC--VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW--ASESFH 168
Query: 395 SMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSA 447
G+ +++ + + G+V + + E+ + V+W +L A
Sbjct: 169 GYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV-VLWNLMLKA 220
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/496 (30%), Positives = 251/496 (50%), Gaps = 36/496 (7%)
Query: 23 QQLHCYILKSGFLSNVFVSTALMGFYRKINS---LADAHKMFVEIPQPSVVSWNSLISGY 79
+Q+H +LK+G + + + T + F S L A +F +P WN +I G+
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 80 VQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGV 139
S + ++L L+ + S +AY+F S L AC L + + IH++I K E V
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150
Query: 140 VIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPNP 199
N LI+ Y A GN +LA R+P P
Sbjct: 151 YAVNSLINSY-------------------------------AVTGNFKLAHLLFDRIPEP 179
Query: 200 DTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFGEMQ 259
D +S+N VI G + G ++ A+ + M N+ SW ++++GYV + EAL LF EMQ
Sbjct: 180 DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239
Query: 260 SKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCGQVE 319
+ DV D + + LS A L AL G IHS + K + V+ L+DMY+KCG++E
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME 299
Query: 320 IADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVLAAC 379
A +F+++ +K++ W A+I+GYA +G + I F +++ + ++P+ +TF VL AC
Sbjct: 300 EALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKM-GIKPNVITFTAVLTAC 358
Query: 380 SHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGSYGV 439
S+T + ++ F SM +DY +KPT+EH ++ L+G+ G + A+R I+E+ V
Sbjct: 359 SYTGL-VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV 417
Query: 440 VWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRNFMR 499
+W ALL A ++++ +I ++ YV N++ WD A+ R M+
Sbjct: 418 IWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMK 477
Query: 500 ERGLRKEAGCSWIEVE 515
E+G+ K GCS I +E
Sbjct: 478 EQGVAKVPGCSTISLE 493
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ L + L A + LG + +H Y+ K+ + + L+ Y K + +A ++
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F I + SV +W +LISGY G R+A++ F+E+++ I + +FT+ L AC G +
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 121 QLGMAIHSKIVKYSLERGVVIA------NCLIDMYGKCGSVEDAIGVFGEM-IDKDIISW 173
+ G K++ YS+ER + C++D+ G+ G +++A EM + + + W
Sbjct: 365 EEG-----KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 419
Query: 174 NSVIAASARNGNLELA 189
+++ A + N+EL
Sbjct: 420 GALLKACRIHKNIELG 435
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/501 (30%), Positives = 262/501 (52%), Gaps = 26/501 (5%)
Query: 24 QLHCYILKSGFLSNVFVSTALMGFYRKIN----SLADAHKMFVEIPQPSVVSWNSLISGY 79
Q+H +KSG + + + ++ F + L AHK+F ++PQ + SWN++I G+
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 80 VQSGKYRK--ALNLFVELERSE-IYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLE 136
+S + + A+ LF E+ E + + ++F S L AC + G +Q G IH +KY
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 137 RGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRL 196
+ + L+ MY CG ++DA +F K+II + V+ R + E+
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFY----KNIIEKDMVVMTDRRKRDGEIVL------ 210
Query: 197 PNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEALHLFG 256
+N +I+G + GD + A M+ M + SWN++++GY +A+ +F
Sbjct: 211 -------WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFR 263
Query: 257 EMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDMYSKCG 316
EM+ D+ + T ++L I+ L +L G +H G+ V+ SAL+DMYSKCG
Sbjct: 264 EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 323
Query: 317 QVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDSVTFLNVL 376
+E A +F L R+N++TW+AMI G+A +G I+ F +++ ++P V ++N+L
Sbjct: 324 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQA-GVRPSDVAYINLL 382
Query: 377 AACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEVWRAQRMIRELGFGS 436
ACSH + ++ YF M G++P +EH M+ L+G+ G + A+ I +
Sbjct: 383 TACSHGGL-VEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKP 441
Query: 437 YGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLYTSHGNWDVASVMRN 496
V+W+ALL A ++++ + A ++ + YV L N+Y S GNW S MR
Sbjct: 442 DDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRL 501
Query: 497 FMRERGLRKEAGCSWIEVENV 517
M+E+ +RK+ GCS I+++ V
Sbjct: 502 RMKEKDIRKDPGCSLIDIDGV 522
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 157/378 (41%), Gaps = 98/378 (25%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGF------LSNV--------FVSTALMG 46
PN + +L+A + G +Q+H LK GF +SN+ F+ A +
Sbjct: 126 PNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVL 185
Query: 47 FYRKI---------------------NSLAD----------AHKMFVEIPQPSVVSWNSL 75
FY+ I N + D A +F ++ Q SVVSWN++
Sbjct: 186 FYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTM 245
Query: 76 ISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSL 135
ISGY +G ++ A+ +F E+++ +I + + S L A +LGSL+LG +H +
Sbjct: 246 ISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGI 305
Query: 136 ERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHR 195
V+ + LIDMY KCG +E AI VF + +++I+W++
Sbjct: 306 RIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSA-------------------- 345
Query: 196 LPNPDTISYNEVINGIAQFGDIEDAIMILSSMPS----PNSSSWNSILTGYVNRNRVPEA 251
+ING A G DAI M P+ ++ ++LT + V E
Sbjct: 346 -----------MINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 394
Query: 252 LHLFGEMQSKD---VPMDEYTFSTMLSGIAGL---------------SALTWGMLIHSCV 293
F +M S D ++ Y L G +GL + W L+ +C
Sbjct: 395 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACR 454
Query: 294 IKQGLDASIVVASALLDM 311
++ ++ VA+ L+DM
Sbjct: 455 MQGNVEMGKRVANILMDM 472
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 157/516 (30%), Positives = 263/516 (50%), Gaps = 42/516 (8%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLS-NVFVSTALMGFYRKINSLADAHK 59
P+ +L++ASS L + +Q+HC+I+ SG LS ++ +L+ FY ++ + A K
Sbjct: 131 PDRQTFLYLMKASSFL---SEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEK 187
Query: 60 MFVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGS 119
+F +P P V S+N +I GY + G +AL L+ ++ I D Y+ S L CG L
Sbjct: 188 VFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSD 247
Query: 120 LQLGMAIHSKIVKYS--LERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVI 177
++LG +H I + ++++N L+DMY KC A F M KD+ SWN+++
Sbjct: 248 IRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMV 307
Query: 178 AASARNGNLELAFGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNS 237
G + GD+E A + MP + SWNS
Sbjct: 308 V-------------------------------GFVRLGDMEAAQAVFDQMPKRDLVSWNS 336
Query: 238 ILTGYVNRNRVPEALH-LFGEMQ-SKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIK 295
+L GY + + LF EM + V D T +++SG A L+ G +H VI+
Sbjct: 337 LLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIR 396
Query: 296 QGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIEL 355
L ++SAL+DMY KCG +E A +F++ K++ W +MITG A +G+ + ++L
Sbjct: 397 LQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQL 456
Query: 356 FEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRL 415
F +++ + P++VT L VL ACSH+ + ++ F M +G P EH S++ L
Sbjct: 457 FGRMQE-EGVTPNNVTLLAVLTACSHSGL-VEEGLHVFNHMKDKFGFDPETEHYGSLVDL 514
Query: 416 MGQKGEVWRAQRMI-RELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYV 474
+ + G V A+ ++ +++ +W ++LSA D++ A ++ E++KLE + +
Sbjct: 515 LCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGG 574
Query: 475 YVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCS 510
YV+L N+Y + G W + R M RG++K AG S
Sbjct: 575 YVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 252 bits (644), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 152/527 (28%), Positives = 272/527 (51%), Gaps = 41/527 (7%)
Query: 29 ILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVEIPQ--PSVVSWNSLISGYVQSGKYR 86
+L+ +NV + T + + A K+F + PQ S +S NS+I Y+++ +Y
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYP 59
Query: 87 KALNLFVELERSEIYA-DAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCL 145
+ L+ +L + +A D ++FT+ +C + G+ +HS+I ++ + ++ +
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 146 IDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPN-PDTISY 204
+DMY K G + A F EM + +SW ++I+ R G L+LA ++P+ D + Y
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIY 179
Query: 205 NEVINGIAQFGD-------------------------------IEDAIMILSSMPSPNSS 233
N +++G + GD I+ A + +MP N
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 234 SWNSILTGYVNRNRVPEALHLFGEMQ-SKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSC 292
SWN+++ GY + E + LF EMQ + + D+ T ++L I+ AL+ G H
Sbjct: 240 SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 293 VIKQGLDASIVVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKV 352
V ++ LD + V +A+LDMYSKCG++E A +F + K + +WNAMI GYA NG+
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 353 IELFEQLKTVRDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSM 412
++LF + + + +PD +T L V+ AC+H + ++ ++F M ++ G+ +EH M
Sbjct: 360 LDLF--VTMMIEEKPDEITMLAVITACNHGGL-VEEGRKWFHVM-REMGLNAKIEHYGCM 415
Query: 413 IRLMGQKGEVWRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSD 472
+ L+G+ G + A+ +I + F G++ + LSA G D++ A + ++LE +D
Sbjct: 416 VDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQND 475
Query: 473 YVYVMLCNLYTSHGNWDVASVMRNFMRERGLRKEAGCSWIEVENVAA 519
YV+L NLY + WD +++N MR+ +KE GCS IE+ + +
Sbjct: 476 GNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVS 522
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 98/196 (50%), Gaps = 2/196 (1%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P++ + +L A SD G + + HC++ + V V TA++ Y K + A ++
Sbjct: 272 PDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRI 331
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F E+P+ V SWN++I GY +G R AL+LFV + E D + + + AC G +
Sbjct: 332 FDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLV 390
Query: 121 QLGMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEM-IDKDIISWNSVIAA 179
+ G + + L + C++D+ G+ GS+++A + M + + I +S ++A
Sbjct: 391 EEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSA 450
Query: 180 SARNGNLELAFGFLHR 195
+ ++E A L +
Sbjct: 451 CGQYKDIERAERILKK 466
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 251 bits (642), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 260/515 (50%), Gaps = 38/515 (7%)
Query: 4 YVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKMFVE 63
Y + L R S W ++++ I+ G + F+ T ++ F KI + A ++F +
Sbjct: 12 YFIPFLQRVKSRNEW----KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQ 67
Query: 64 IPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEI-YADAYSFTSALAACGQLGSLQL 122
+ P+V +NS+I Y + Y + ++ +L R D ++F +C LGS L
Sbjct: 68 VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 127
Query: 123 GMAIHSKIVKYSLERGVVIANCLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASAR 182
G +H + K+ VV N LIDMY K + DA VF EM ++D+ISWNS+
Sbjct: 128 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSL------ 181
Query: 183 NGNLELAFGFLHRLPNPDTISYNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGY 242
++G A+ G ++ A + M SW ++++GY
Sbjct: 182 -------------------------LSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGY 216
Query: 243 VNRNRVPEALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASI 302
EA+ F EMQ + DE + ++L A L +L G IH ++G
Sbjct: 217 TGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQT 276
Query: 303 VVASALLDMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTV 362
V +AL++MYSKCG + A +F + K++++W+ MI+GYA +G+ IE F +++
Sbjct: 277 GVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRA 336
Query: 363 RDLQPDSVTFLNVLAACSHTDIPFDKVSEYFESMTKDYGIKPTVEHCCSMIRLMGQKGEV 422
+ ++P+ +TFL +L+ACSH + + + YF+ M +DY I+P +EH +I ++ + G++
Sbjct: 337 K-VKPNGITFLGLLSACSHVGM-WQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKL 394
Query: 423 WRAQRMIRELGFGSYGVVWRALLSASGACSDLDVARISAAEVIKLEGDSDYVYVMLCNLY 482
RA + + + +W +LLS+ +LDVA ++ +++LE + YV+L N+Y
Sbjct: 395 ERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIY 454
Query: 483 TSHGNWDVASVMRNFMRERGLRKEAGCSWIEVENV 517
G W+ S +R +R ++K G S IEV N+
Sbjct: 455 ADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNI 489
Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 159/351 (45%), Gaps = 58/351 (16%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+ + + ++ + LG +Q+H ++ K G +V AL+ Y K + L DAHK+
Sbjct: 107 PDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKV 166
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRK-------------------------------AL 89
F E+ + V+SWNSL+SGY + G+ +K A+
Sbjct: 167 FDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAM 226
Query: 90 NLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIANCLIDMY 149
+ F E++ + I D S S L +C QLGSL+LG IH + + + N LI+MY
Sbjct: 227 DFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMY 286
Query: 150 GKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELA---FGFLHRLP-NPDTISYN 205
KCG + AI +FG+M KD+ISW+++I+ A +GN A F + R P+ I++
Sbjct: 287 SKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFL 346
Query: 206 EVINGIAQFGDIEDAIMILSSMPS-----PNSSSWNSILTGYVNRNRVPEALHLFGEMQS 260
+++ + G ++ + M P + ++ ++ A+ + +
Sbjct: 347 GLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEI-----T 401
Query: 261 KDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALLDM 311
K +PM + WG L+ SC LD ++V L+++
Sbjct: 402 KTMPMKP-------------DSKIWGSLLSSCRTPGNLDVALVAMDHLVEL 439
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 130/283 (45%), Gaps = 20/283 (7%)
Query: 1 PNEYVLFHLLRASSDLGWDTYCQQLHCYILKSGFLSNVFVSTALMGFYRKINSLADAHKM 60
P+E L +L + + LG + +H Y + GFL V AL+ Y K ++ A ++
Sbjct: 239 PDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQL 298
Query: 61 FVEIPQPSVVSWNSLISGYVQSGKYRKALNLFVELERSEIYADAYSFTSALAACGQLGSL 120
F ++ V+SW+++ISGY G A+ F E++R+++ + +F L+AC +G
Sbjct: 299 FGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMW 358
Query: 121 QLGMAIHSKIVK-YSLERGVVIANCLIDMYGKCGSVEDAIGVFGEM-IDKDIISWNSVIA 178
Q G+ + + Y +E + CLID+ + G +E A+ + M + D W S+++
Sbjct: 359 QEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLS 418
Query: 179 ASARNGNLELAF---GFLHRLPNPDTISYNEVINGIAQFGDIEDAIMI--------LSSM 227
+ GNL++A L L D +Y + N A G ED + +
Sbjct: 419 SCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKT 478
Query: 228 PSPNSSSWNSILTGYVNRN-------RVPEALHLFGEMQSKDV 263
P + N+I+ +V+ + + L LF Q +DV
Sbjct: 479 PGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTSHQDQDV 521
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,668,312
Number of Sequences: 539616
Number of extensions: 7453955
Number of successful extensions: 25904
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 17507
Number of HSP's gapped (non-prelim): 2251
length of query: 525
length of database: 191,569,459
effective HSP length: 122
effective length of query: 403
effective length of database: 125,736,307
effective search space: 50671731721
effective search space used: 50671731721
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)