Query 048770
Match_columns 243
No_of_seqs 359 out of 2104
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 13:00:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048770.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048770hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2488 Acetyltransferase (GNA 100.0 1.7E-36 3.6E-41 238.7 13.9 191 5-232 7-198 (202)
2 PF00583 Acetyltransf_1: Acety 99.7 2.3E-16 5.1E-21 110.7 11.9 81 126-207 1-83 (83)
3 PRK10146 aminoalkylphosphonic 99.7 3.3E-16 7.2E-21 121.3 12.2 85 125-210 51-137 (144)
4 KOG3139 N-acetyltransferase [G 99.7 8.2E-15 1.8E-19 113.5 15.7 130 62-216 22-151 (165)
5 PRK10140 putative acetyltransf 99.6 1.6E-14 3.5E-19 113.8 17.1 106 124-231 54-160 (162)
6 PRK09491 rimI ribosomal-protei 99.6 1.8E-14 3.8E-19 112.3 17.0 100 128-233 47-146 (146)
7 TIGR03827 GNAT_ablB putative b 99.6 4.8E-15 1E-19 127.2 14.8 146 62-233 121-266 (266)
8 PRK03624 putative acetyltransf 99.6 1.9E-14 4.1E-19 110.1 13.3 83 124-211 48-130 (140)
9 TIGR01575 rimI ribosomal-prote 99.6 4.6E-14 1E-18 106.8 13.9 84 129-217 39-122 (131)
10 TIGR02382 wecD_rffC TDP-D-fuco 99.6 7.7E-14 1.7E-18 113.9 15.4 79 129-211 107-185 (191)
11 PTZ00330 acetyltransferase; Pr 99.6 4.8E-14 1E-18 109.5 13.5 79 128-210 59-140 (147)
12 KOG3216 Diamine acetyltransfer 99.6 5.1E-14 1.1E-18 107.9 12.5 82 129-211 63-146 (163)
13 TIGR02406 ectoine_EctA L-2,4-d 99.6 7.3E-14 1.6E-18 110.6 13.7 89 124-214 42-131 (157)
14 COG1247 Sortase and related ac 99.6 3.2E-13 7E-18 107.2 16.4 106 129-236 61-167 (169)
15 PRK10975 TDP-fucosamine acetyl 99.5 2.6E-13 5.5E-18 111.0 15.7 79 129-211 110-188 (194)
16 PRK10809 ribosomal-protein-S5- 99.5 1.6E-12 3.5E-17 106.1 17.2 101 129-232 85-186 (194)
17 PHA00673 acetyltransferase dom 99.5 6.3E-13 1.4E-17 104.1 14.0 132 57-210 7-145 (154)
18 PRK10314 putative acyltransfer 99.5 5.5E-13 1.2E-17 105.3 13.8 129 53-211 3-134 (153)
19 PHA01807 hypothetical protein 99.5 3.8E-13 8.2E-18 106.0 12.6 84 124-210 56-140 (153)
20 PRK10514 putative acetyltransf 99.5 1.3E-12 2.8E-17 101.3 14.8 75 129-217 58-132 (145)
21 PRK15130 spermidine N1-acetylt 99.5 2.2E-12 4.7E-17 104.5 16.6 107 123-233 59-166 (186)
22 PRK10151 ribosomal-protein-L7/ 99.5 7.8E-13 1.7E-17 106.5 13.5 109 124-236 70-179 (179)
23 PF13508 Acetyltransf_7: Acety 99.5 5.6E-13 1.2E-17 93.1 10.8 76 122-208 4-79 (79)
24 COG0456 RimI Acetyltransferase 99.5 9E-13 1.9E-17 105.4 13.2 86 131-217 72-160 (177)
25 TIGR03103 trio_acet_GNAT GNAT- 99.5 1.3E-12 2.8E-17 122.6 16.0 82 129-211 133-217 (547)
26 PLN02706 glucosamine 6-phospha 99.5 7.1E-13 1.5E-17 103.6 11.9 79 129-211 63-144 (150)
27 PF13673 Acetyltransf_10: Acet 99.5 7.9E-13 1.7E-17 98.6 11.4 72 123-206 46-117 (117)
28 PF13420 Acetyltransf_4: Acety 99.5 5.8E-13 1.3E-17 104.4 11.1 85 129-216 59-144 (155)
29 PF13523 Acetyltransf_8: Acety 99.5 2.2E-12 4.9E-17 101.0 14.0 130 64-213 7-143 (152)
30 PRK09831 putative acyltransfer 99.4 2.6E-12 5.6E-17 100.4 13.2 139 60-231 4-143 (147)
31 TIGR03448 mycothiol_MshD mycot 99.4 5.6E-12 1.2E-16 109.2 15.8 127 58-211 2-128 (292)
32 TIGR03585 PseH pseudaminic aci 99.4 9.2E-12 2E-16 97.5 14.8 100 124-228 54-154 (156)
33 TIGR03448 mycothiol_MshD mycot 99.4 2.2E-12 4.7E-17 111.7 12.0 82 129-212 208-289 (292)
34 TIGR01686 FkbH FkbH-like domai 99.4 2.3E-11 5E-16 107.1 17.6 76 129-209 242-319 (320)
35 PRK10562 putative acetyltransf 99.4 2E-11 4.2E-16 95.0 14.5 91 123-231 50-140 (145)
36 PRK07922 N-acetylglutamate syn 99.4 1.4E-11 3.1E-16 98.8 13.5 77 128-213 53-129 (169)
37 PLN02825 amino-acid N-acetyltr 99.3 2.5E-11 5.4E-16 112.2 15.2 136 44-211 352-490 (515)
38 PRK07757 acetyltransferase; Pr 99.3 3.4E-11 7.4E-16 94.2 13.3 78 125-211 45-122 (152)
39 KOG3235 Subunit of the major N 99.3 8E-12 1.7E-16 96.4 9.2 89 129-217 50-141 (193)
40 PRK05279 N-acetylglutamate syn 99.3 5.4E-11 1.2E-15 109.2 15.1 80 125-211 338-417 (441)
41 TIGR01890 N-Ac-Glu-synth amino 99.3 1.2E-10 2.6E-15 106.5 14.2 123 58-212 284-406 (429)
42 PF13527 Acetyltransf_9: Acety 99.2 6.9E-11 1.5E-15 89.5 10.3 120 61-209 4-127 (127)
43 PRK12308 bifunctional arginino 99.2 2E-10 4.2E-15 109.5 14.5 81 124-213 506-586 (614)
44 cd02169 Citrate_lyase_ligase C 99.2 8.4E-11 1.8E-15 102.1 10.8 79 123-213 8-87 (297)
45 PF13302 Acetyltransf_3: Acety 99.2 3.2E-10 7E-15 87.0 12.8 76 129-207 66-142 (142)
46 KOG3396 Glucosamine-phosphate 99.2 2.9E-10 6.3E-15 85.7 11.6 132 52-210 7-143 (150)
47 PRK13688 hypothetical protein; 99.2 1.9E-10 4.1E-15 91.0 10.3 83 122-213 46-135 (156)
48 PF08445 FR47: FR47-like prote 99.2 4.1E-10 9E-15 80.2 11.0 60 149-210 22-81 (86)
49 COG1246 ArgA N-acetylglutamate 99.1 3.6E-10 7.7E-15 87.7 9.2 77 128-211 47-123 (153)
50 COG3981 Predicted acetyltransf 99.1 9.3E-10 2E-14 86.5 11.4 81 129-214 77-162 (174)
51 COG1670 RimL Acetyltransferase 99.1 1.8E-09 3.8E-14 86.2 11.9 84 130-215 77-162 (187)
52 TIGR00124 cit_ly_ligase [citra 99.1 1.6E-09 3.4E-14 95.6 11.7 77 126-214 36-112 (332)
53 KOG3234 Acetyltransferase, (GN 99.0 6.1E-10 1.3E-14 86.0 7.1 105 129-236 50-154 (173)
54 PRK01346 hypothetical protein; 99.0 7.1E-09 1.5E-13 94.3 14.9 83 123-211 49-136 (411)
55 COG3153 Predicted acetyltransf 99.0 7.7E-09 1.7E-13 82.4 12.4 143 62-236 9-153 (171)
56 KOG3397 Acetyltransferases [Ge 99.0 3.2E-09 7E-14 83.3 9.5 77 128-210 64-140 (225)
57 TIGR01211 ELP3 histone acetylt 99.0 3.6E-09 7.9E-14 98.3 10.5 85 122-210 412-515 (522)
58 KOG3138 Predicted N-acetyltran 98.9 2.1E-09 4.6E-14 86.6 6.8 69 148-217 89-158 (187)
59 COG2153 ElaA Predicted acyltra 98.9 2.4E-08 5.1E-13 76.4 10.2 78 129-211 58-136 (155)
60 cd04301 NAT_SF N-Acyltransfera 98.9 1.8E-08 3.8E-13 65.3 8.4 62 125-187 3-64 (65)
61 COG3393 Predicted acetyltransf 98.8 3.3E-08 7.2E-13 82.9 10.1 85 122-211 178-262 (268)
62 PF14542 Acetyltransf_CG: GCN5 98.6 9.4E-07 2E-11 61.6 10.3 67 126-201 4-70 (78)
63 PF13718 GNAT_acetyltr_2: GNAT 98.5 6.8E-06 1.5E-10 67.0 13.7 83 147-234 89-196 (196)
64 KOG4135 Predicted phosphogluco 98.4 2.6E-06 5.7E-11 65.4 8.7 80 131-211 83-170 (185)
65 PF12746 GNAT_acetyltran: GNAT 98.3 4E-06 8.7E-11 71.7 10.1 83 121-211 165-247 (265)
66 COG3818 Predicted acetyltransf 98.3 2.8E-06 6E-11 63.9 6.8 67 145-212 81-149 (167)
67 COG1444 Predicted P-loop ATPas 98.1 7.2E-06 1.6E-10 78.7 8.2 89 148-242 531-619 (758)
68 PF08444 Gly_acyl_tr_C: Aralky 98.1 1.8E-05 3.8E-10 56.1 6.6 73 129-210 7-79 (89)
69 COG2388 Predicted acetyltransf 98.0 2.1E-05 4.5E-10 57.1 7.1 62 121-185 15-76 (99)
70 PF12568 DUF3749: Acetyltransf 98.0 0.00026 5.7E-09 53.5 12.0 82 122-210 39-124 (128)
71 COG0454 WecD Histone acetyltra 97.8 4.2E-05 9.1E-10 54.1 4.6 44 154-206 87-130 (156)
72 KOG4144 Arylalkylamine N-acety 97.8 1.3E-05 2.7E-10 62.2 1.8 67 147-217 100-167 (190)
73 PRK13834 putative autoinducer 97.8 0.0035 7.6E-08 51.9 16.4 160 52-239 3-189 (207)
74 COG3053 CitC Citrate lyase syn 97.6 0.00055 1.2E-08 58.6 10.1 74 129-214 45-118 (352)
75 COG5628 Predicted acetyltransf 97.6 0.00041 8.9E-09 51.6 7.6 74 129-207 45-119 (143)
76 PF13480 Acetyltransf_6: Acety 97.6 0.0047 1E-07 46.7 14.0 107 63-190 27-136 (142)
77 PF00765 Autoind_synth: Autoin 97.5 0.0017 3.6E-08 52.7 11.1 149 62-239 5-179 (182)
78 COG4552 Eis Predicted acetyltr 97.3 0.00034 7.4E-09 61.3 4.9 84 122-211 40-127 (389)
79 PF01233 NMT: Myristoyl-CoA:pr 97.2 0.018 3.8E-07 45.4 12.6 106 62-184 32-146 (162)
80 COG3916 LasI N-acyl-L-homoseri 97.0 0.083 1.8E-06 43.3 15.8 153 59-239 9-187 (209)
81 PF06852 DUF1248: Protein of u 96.8 0.038 8.2E-07 44.6 11.9 78 130-211 56-137 (181)
82 PF05301 Mec-17: Touch recepto 96.7 0.02 4.4E-07 42.7 9.1 80 129-213 17-106 (120)
83 TIGR03694 exosort_acyl putativ 96.7 0.047 1E-06 46.2 12.6 66 146-215 109-202 (241)
84 COG1243 ELP3 Histone acetyltra 96.6 0.003 6.5E-08 57.4 4.8 78 129-210 415-508 (515)
85 COG3375 Uncharacterized conser 96.0 0.051 1.1E-06 45.0 8.2 100 121-220 46-146 (266)
86 PF13880 Acetyltransf_13: ESCO 95.9 0.011 2.4E-07 40.0 3.6 29 148-176 5-33 (70)
87 cd04264 DUF619-NAGS DUF619 dom 95.9 0.06 1.3E-06 39.1 7.6 66 124-195 11-76 (99)
88 PF01853 MOZ_SAS: MOZ/SAS fami 95.8 0.035 7.5E-07 45.0 6.6 49 130-181 65-113 (188)
89 TIGR03019 pepcterm_femAB FemAB 95.6 0.19 4.2E-06 44.3 11.3 79 128-211 203-281 (330)
90 PLN03238 probable histone acet 95.4 0.061 1.3E-06 46.3 7.1 50 129-181 139-188 (290)
91 KOG2535 RNA polymerase II elon 95.4 0.024 5.2E-07 49.9 4.7 48 159-210 498-546 (554)
92 COG3882 FkbH Predicted enzyme 95.0 0.072 1.6E-06 49.0 6.7 77 129-210 471-549 (574)
93 cd04265 DUF619-NAGS-U DUF619 d 94.8 0.17 3.6E-06 36.8 6.9 60 129-195 17-76 (99)
94 KOG4601 Uncharacterized conser 94.6 0.38 8.3E-06 40.0 9.2 75 130-207 81-164 (264)
95 KOG2036 Predicted P-loop ATPas 94.5 0.18 4E-06 48.4 8.2 86 149-238 615-749 (1011)
96 PLN03239 histone acetyltransfe 94.5 0.12 2.5E-06 45.8 6.5 50 129-181 197-246 (351)
97 PTZ00064 histone acetyltransfe 94.3 0.12 2.5E-06 47.7 6.2 50 129-181 368-417 (552)
98 TIGR03827 GNAT_ablB putative b 93.8 0.2 4.3E-06 42.9 6.5 65 163-236 20-84 (266)
99 KOG2779 N-myristoyl transferas 93.4 0.45 9.6E-06 42.1 8.0 103 63-182 90-201 (421)
100 PLN00104 MYST -like histone ac 93.4 0.12 2.7E-06 47.2 4.7 50 129-181 290-339 (450)
101 COG2401 ABC-type ATPase fused 92.9 0.085 1.8E-06 48.0 2.9 84 148-242 241-329 (593)
102 PF04377 ATE_C: Arginine-tRNA- 92.7 0.99 2.1E-05 34.4 8.1 63 128-194 46-108 (128)
103 PF04339 DUF482: Protein of un 90.9 9.3 0.0002 34.5 13.5 127 52-211 200-329 (370)
104 KOG2747 Histone acetyltransfer 90.0 0.46 9.9E-06 42.8 4.4 32 150-181 262-293 (396)
105 PRK01305 arginyl-tRNA-protein 89.3 2.5 5.3E-05 35.8 8.1 63 128-194 151-213 (240)
106 KOG2696 Histone acetyltransfer 88.9 9.3 0.0002 34.2 11.5 44 150-194 219-262 (403)
107 PHA00432 internal virion prote 88.6 2.3 4.9E-05 32.7 6.7 81 123-211 39-121 (137)
108 PF04958 AstA: Arginine N-succ 88.6 2.2 4.9E-05 37.9 7.6 57 149-207 122-184 (342)
109 PRK14852 hypothetical protein; 88.5 3.9 8.5E-05 41.4 10.0 89 121-212 75-182 (989)
110 PF09390 DUF1999: Protein of u 88.4 4.5 9.7E-05 31.3 8.1 85 121-210 55-140 (161)
111 PF11124 Pho86: Inorganic phos 87.9 4.6 9.9E-05 35.2 8.9 87 124-211 172-271 (304)
112 TIGR03243 arg_catab_AOST argin 87.8 2.9 6.2E-05 37.1 7.8 23 150-172 119-141 (335)
113 TIGR03245 arg_AOST_alph argini 87.2 3.3 7.1E-05 36.8 7.7 24 149-172 119-142 (336)
114 TIGR03244 arg_catab_AstA argin 87.2 3.4 7.4E-05 36.7 7.9 23 150-172 119-141 (336)
115 PRK10456 arginine succinyltran 87.1 3.4 7.4E-05 36.8 7.9 23 150-172 121-143 (344)
116 cd04266 DUF619-NAGS-FABP DUF61 86.9 5.2 0.00011 29.5 7.5 57 146-207 37-95 (108)
117 PF04768 DUF619: Protein of un 84.4 4 8.6E-05 32.7 6.4 72 132-208 71-143 (170)
118 PHA01733 hypothetical protein 83.9 1.5 3.2E-05 34.3 3.6 84 124-214 50-135 (153)
119 COG5027 SAS2 Histone acetyltra 83.8 0.69 1.5E-05 40.8 1.9 45 131-178 248-292 (395)
120 PF13444 Acetyltransf_5: Acety 83.2 3.8 8.2E-05 29.5 5.4 25 146-170 76-100 (101)
121 COG2898 Uncharacterized conser 79.9 19 0.0004 34.2 9.9 60 128-190 400-459 (538)
122 PRK02983 lysS lysyl-tRNA synth 79.2 23 0.0005 36.7 11.2 59 129-191 429-487 (1094)
123 COG5092 NMT1 N-myristoyl trans 77.6 9.9 0.00022 33.4 6.8 107 60-182 85-199 (451)
124 KOG3698 Hyaluronoglucosaminida 77.0 4.6 9.9E-05 38.3 4.9 70 154-233 822-891 (891)
125 PF11039 DUF2824: Protein of u 74.6 36 0.00079 26.0 9.9 87 124-217 41-128 (151)
126 PF11090 DUF2833: Protein of u 73.8 24 0.00052 24.9 6.8 43 165-210 41-83 (86)
127 COG5630 ARG2 Acetylglutamate s 72.3 5.7 0.00012 35.7 4.1 75 130-209 382-458 (495)
128 PF09924 DUF2156: Uncharacteri 70.8 40 0.00087 29.1 9.2 65 123-191 182-248 (299)
129 KOG4387 Ornithine decarboxylas 70.5 39 0.00084 27.2 8.0 80 154-238 104-188 (191)
130 PRK15312 antimicrobial resista 65.3 14 0.0003 32.2 5.0 100 58-182 159-268 (298)
131 PF07395 Mig-14: Mig-14; Inte 63.6 14 0.00031 31.6 4.8 100 58-182 131-238 (264)
132 KOG2779 N-myristoyl transferas 62.4 1E+02 0.0022 27.8 9.8 121 61-209 265-395 (421)
133 COG2935 Putative arginyl-tRNA: 59.5 40 0.00086 28.7 6.5 62 129-194 159-220 (253)
134 COG3138 AstA Arginine/ornithin 58.3 19 0.00041 31.3 4.5 20 151-170 122-141 (336)
135 PF02799 NMT_C: Myristoyl-CoA: 58.1 1E+02 0.0022 25.1 10.7 122 61-210 33-164 (190)
136 cd07235 MRD Mitomycin C resist 57.4 12 0.00025 27.1 2.9 27 183-211 2-28 (122)
137 cd03173 DUF619-like DUF619 dom 56.3 74 0.0016 23.0 7.8 49 146-200 31-79 (98)
138 PF12261 T_hemolysin: Thermost 52.8 1.2E+02 0.0026 24.4 8.9 49 162-214 97-145 (179)
139 PRK13740 conjugal transfer pro 49.2 5.1 0.00011 26.9 -0.2 15 29-43 42-56 (70)
140 PF02474 NodA: Nodulation prot 48.6 34 0.00074 27.5 4.3 84 147-235 84-178 (196)
141 KOG3014 Protein involved in es 45.3 55 0.0012 27.8 5.2 31 146-176 181-211 (257)
142 PF04816 DUF633: Family of unk 44.4 20 0.00043 29.5 2.5 68 163-236 73-142 (205)
143 cd08353 Glo_EDI_BRP_like_7 Thi 43.9 19 0.00042 26.8 2.3 29 181-211 3-31 (142)
144 COG2384 Predicted SAM-dependen 39.4 74 0.0016 26.6 5.1 66 163-234 92-159 (226)
145 PRK05031 tRNA (uracil-5-)-meth 39.1 94 0.002 27.8 6.2 70 152-231 290-361 (362)
146 cd08346 PcpA_N_like N-terminal 37.8 35 0.00077 24.2 2.8 31 181-212 1-31 (126)
147 cd09012 Glo_EDI_BRP_like_24 Th 37.5 30 0.00065 25.0 2.4 24 185-210 4-27 (124)
148 PF00903 Glyoxalase: Glyoxalas 37.2 21 0.00046 25.4 1.5 31 182-213 2-32 (128)
149 PRK04531 acetylglutamate kinas 35.6 74 0.0016 29.1 5.0 56 147-207 309-364 (398)
150 cd07265 2_3_CTD_N N-terminal d 33.6 42 0.0009 24.1 2.6 32 181-213 4-35 (122)
151 cd08347 PcpA_C_like C-terminal 33.4 41 0.00089 26.0 2.7 32 181-213 1-32 (157)
152 COG0375 HybF Zn finger protein 31.9 1.3E+02 0.0027 22.5 4.8 37 164-200 5-47 (115)
153 cd08356 Glo_EDI_BRP_like_17 Th 31.5 37 0.0008 24.4 2.0 19 194-213 13-31 (113)
154 cd07255 Glo_EDI_BRP_like_12 Th 31.3 51 0.0011 23.6 2.8 32 182-214 3-34 (125)
155 cd08358 Glo_EDI_BRP_like_21 Th 31.1 48 0.001 24.9 2.6 26 184-210 5-30 (127)
156 PHA02769 hypothetical protein; 29.4 58 0.0013 24.3 2.7 48 163-213 91-141 (154)
157 cd07233 Glyoxalase_I Glyoxalas 29.2 68 0.0015 22.6 3.1 28 183-211 2-29 (121)
158 PF04393 DUF535: Protein of un 29.1 3.8E+02 0.0083 23.2 10.4 71 121-191 126-210 (288)
159 cd08342 HPPD_N_like N-terminal 29.0 77 0.0017 23.5 3.5 30 183-213 2-31 (136)
160 PRK10150 beta-D-glucuronidase; 29.0 3.9E+02 0.0084 25.7 9.0 82 132-214 272-358 (604)
161 cd08350 BLMT_like BLMT, a bleo 28.7 47 0.001 23.9 2.2 20 193-213 13-32 (120)
162 cd08352 Glo_EDI_BRP_like_1 Thi 28.4 57 0.0012 23.0 2.6 30 181-211 3-32 (125)
163 COG0346 GloA Lactoylglutathion 28.2 64 0.0014 22.5 2.8 32 182-214 3-34 (138)
164 TIGR03645 glyox_marine lactoyl 25.9 52 0.0011 25.5 2.1 28 181-209 4-31 (162)
165 cd07252 BphC1-RGP6_N_like N-te 24.9 89 0.0019 22.4 3.1 30 181-211 2-31 (120)
166 KOG1472 Histone acetyltransfer 24.8 18 0.00039 35.4 -0.9 77 132-213 431-507 (720)
167 PF12681 Glyoxalase_2: Glyoxal 24.8 62 0.0014 22.3 2.2 22 194-215 7-28 (108)
168 PRK11478 putative lyase; Provi 23.9 59 0.0013 23.4 2.0 29 181-210 6-34 (129)
169 cd09013 BphC-JF8_N_like N-term 23.5 78 0.0017 22.6 2.5 32 181-213 6-37 (121)
170 cd07254 Glo_EDI_BRP_like_20 Th 23.2 1.3E+02 0.0028 21.3 3.7 20 194-213 13-32 (120)
171 cd07267 THT_Oxygenase_N N-term 23.2 60 0.0013 23.1 1.8 29 182-212 4-32 (113)
172 PTZ00129 40S ribosomal protein 22.7 3.8E+02 0.0082 21.0 6.5 47 164-211 71-129 (149)
173 COG3414 SgaB Phosphotransferas 22.4 1.4E+02 0.003 21.3 3.5 23 161-183 8-32 (93)
174 COG2348 Peptidoglycan interpep 22.3 4.9E+02 0.011 24.1 7.8 55 159-214 78-147 (418)
175 COG2266 GTP:adenosylcobinamide 22.3 2.3E+02 0.0049 22.9 5.0 48 165-214 25-72 (177)
176 PF03983 SHD1: SLA1 homology d 22.1 1.6E+02 0.0034 19.9 3.5 26 48-76 42-67 (70)
177 cd08348 BphC2-C3-RGP6_C_like T 22.1 96 0.0021 22.5 2.8 31 182-213 2-32 (134)
178 TIGR00068 glyox_I lactoylgluta 21.8 57 0.0012 24.7 1.5 30 180-210 16-45 (150)
179 PF02388 FemAB: FemAB family; 21.7 6.1E+02 0.013 23.0 8.7 80 130-213 45-142 (406)
180 cd07253 Glo_EDI_BRP_like_2 Thi 21.7 1.2E+02 0.0025 21.3 3.2 32 181-213 3-34 (125)
181 PRK04101 fosfomycin resistance 21.6 98 0.0021 23.0 2.8 32 181-213 4-35 (139)
182 PF12953 DUF3842: Domain of un 21.3 2.1E+02 0.0045 21.9 4.4 51 159-214 6-56 (131)
183 TIGR02143 trmA_only tRNA (urac 20.9 2.9E+02 0.0062 24.7 6.1 69 152-230 281-351 (353)
184 PF06933 SSP160: Special lobe- 20.4 85 0.0018 28.7 2.5 21 4-24 379-399 (756)
185 PF06559 DCD: 2'-deoxycytidine 20.2 53 0.0012 29.3 1.2 36 127-165 321-356 (364)
186 TIGR00100 hypA hydrogenase nic 20.1 3E+02 0.0065 20.2 5.1 38 164-201 5-48 (115)
187 cd08344 MhqB_like_N N-terminal 20.0 77 0.0017 22.4 1.9 30 181-212 2-31 (112)
No 1
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=100.00 E-value=1.7e-36 Score=238.72 Aligned_cols=191 Identities=29% Similarity=0.453 Sum_probs=175.5
Q ss_pred hHHHHhhhHHHHHHHHHHHHHHHHHhhcccccccCccccccccCCeEEEEEeccCCCCCHHHHHHHHHHHHhhhhhhhcC
Q 048770 5 NREKKRKRREILEKKKAIDESLKAASAHKDHLTAFPSFRQYERNGLSVHLESGCGDKLSSAEKQYILNLLKANMEGPYGS 84 (243)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~g~~~~l~~~~~~~l~~~~~~~i~~L~~~nm~~~y~~ 84 (243)
.....++|-.+++.|+..+++|.+++++.+|++.|+-+.+.+.|+. -++++|+|+|++.||.+.|.+
T Consensus 7 ~~~~~~qr~~e~~a~~~~~~~v~~~~~lg~p~e~~~~~~~~~~~~~-------------~~~ldw~f~L~k~nm~~~Y~q 73 (202)
T KOG2488|consen 7 YTGFSKQRLTERAAMNPMERKVLKLCRLGKPLEIFHMGTKGSNNTD-------------YEDLDWCFSLFKKNMGAMYRQ 73 (202)
T ss_pred hhhhhhHHHHHHhhcchHHHHHHHHHhcCCcHHHHHHhhhccccch-------------HHHHHHHHHHHHhhhHHHhhh
Confidence 4467788889999999999999999999999999999999888766 299999999999999999976
Q ss_pred -CCCchhHhhHhhhccCCcceEEEEecCCCCcCcccccceEEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCC
Q 048770 85 -EWPAEEKVKRREMVASEARYIFARELDAPSASASEMSKTNFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGK 163 (243)
Q Consensus 85 -~w~~~~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~ 163 (243)
+|||++..|+.||.....+|+++++.. +.+|||++|+|+.+.+.+++||++++|.+.|||+
T Consensus 74 s~~Gw~~~~K~~El~~~~~~Yi~a~~~~------------------~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR~k 135 (202)
T KOG2488|consen 74 SSWGWDDNSKAKELRNRKLRYICAWNNK------------------SKLVGFTMFRFTVDTGDPVLYCYEVQVASAYRGK 135 (202)
T ss_pred cccccCchhHHHHHhhccceEEEEEcCC------------------CceeeEEEEEEEcccCCeEEEEEEEeehhhhhcc
Confidence 999999999999999999999999853 5899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEeccCCCCCCCCCCCcceEEEEeee
Q 048770 164 GLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSISPSRVDPFTGVEKSYEILCKV 232 (243)
Q Consensus 164 GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~~~~~~~g~~~~y~il~k~ 232 (243)
|||++||+.++..+...++++|+|||+.+|.+|++||. ++||.....+|....+. +|.|.++.
T Consensus 136 GiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~-~~gf~~~~~sp~~~s~~-----~~~~~s~~ 198 (202)
T KOG2488|consen 136 GIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYH-RLGFVVDEESPCDTSGE-----DYFIKSKE 198 (202)
T ss_pred ChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHHH-HcCcccCCCCCccccch-----hhhccccc
Confidence 99999999999999999999999999999999999999 99999999999876655 55555543
No 2
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.71 E-value=2.3e-16 Score=110.71 Aligned_cols=81 Identities=35% Similarity=0.457 Sum_probs=74.8
Q ss_pred eeeCCeEEEEEEEEeeecCC--cCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhC
Q 048770 126 AESKGSIVGFVHFRFCLEED--VPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSK 203 (243)
Q Consensus 126 a~~~g~ivG~~~~~~~~~~~--~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~k 203 (243)
++++|++||++.+....... ...++|..++|+|+|||+|+|+.|++.+++.+++.|+..+.+.|.+.|..+++||+ +
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~-k 79 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYE-K 79 (83)
T ss_dssp EEETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHH-H
T ss_pred CcCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHH-H
Confidence 35689999999998776642 57899999999999999999999999999999999999999999999999999999 9
Q ss_pred CCcE
Q 048770 204 LRYV 207 (243)
Q Consensus 204 lGF~ 207 (243)
+||+
T Consensus 80 ~Gf~ 83 (83)
T PF00583_consen 80 LGFE 83 (83)
T ss_dssp TTEE
T ss_pred cCCC
Confidence 9996
No 3
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.69 E-value=3.3e-16 Score=121.29 Aligned_cols=85 Identities=22% Similarity=0.258 Sum_probs=72.5
Q ss_pred EeeeCCeEEEEEEEEeeec--CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHh
Q 048770 125 FAESKGSIVGFVHFRFCLE--EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLS 202 (243)
Q Consensus 125 va~~~g~ivG~~~~~~~~~--~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~ 202 (243)
++..+|++||++.+..... .....++|..++|+|++||+|+|+.||+.+++.|+..|+..+.|.|...|..|++||+
T Consensus 51 v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~- 129 (144)
T PRK10146 51 LALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYL- 129 (144)
T ss_pred EEEECCEEEEEEEEEecccccccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHH-
Confidence 3344799999999865432 1222357889999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEec
Q 048770 203 KLRYVVSS 210 (243)
Q Consensus 203 klGF~~~~ 210 (243)
++||+..+
T Consensus 130 ~~Gf~~~~ 137 (144)
T PRK10146 130 REGYEQSH 137 (144)
T ss_pred HcCCchhh
Confidence 99998775
No 4
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=99.65 E-value=8.2e-15 Score=113.47 Aligned_cols=130 Identities=22% Similarity=0.271 Sum_probs=97.2
Q ss_pred CCHHHHHHHHHHHHhhhhhhhcCCCCchhHhhHhhhccCCcceEEEEecCCCCcCcccccceEEeeeCCeEEEEEEEEee
Q 048770 62 LSSAEKQYILNLLKANMEGPYGSEWPAEEKVKRREMVASEARYIFARELDAPSASASEMSKTNFAESKGSIVGFVHFRFC 141 (243)
Q Consensus 62 l~~~~~~~i~~L~~~nm~~~y~~~w~~~~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~~~~ 141 (243)
.....++.+..|+..++.+.|... ...-+...+..+.++.-+. ++..||.+.+...
T Consensus 22 ~~~~~l~~im~Li~k~lsepyS~~-------tyrYf~~~wp~~~~~a~d~-----------------~~~~VGai~ck~~ 77 (165)
T KOG3139|consen 22 PAEEYLADIMRLIDKDLSEPYSIY-------TYRYFVPNWPCFCFLALDE-----------------KGDTVGAIVCKLD 77 (165)
T ss_pred hHHHHHHHHHHHHhhhcCchhHHH-------HHHhcccCCceEEEEEEcC-----------------CCceEEEEEEecc
Confidence 345566678889998888877320 0011111222222222211 2337999988766
Q ss_pred ecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEeccCCCCC
Q 048770 142 LEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSISPSRV 216 (243)
Q Consensus 142 ~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~~~ 216 (243)
...+...+||..++|+++|||+|||+.|++.+++.++..|+..|+|.|...|.+|+++|+ ++||+..+.+-..+
T Consensus 78 ~~r~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~-sLGF~r~~r~~~YY 151 (165)
T KOG3139|consen 78 THRNTLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYE-SLGFKRDKRLFRYY 151 (165)
T ss_pred ccCCcceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHHH-hcCceEecceeEEE
Confidence 554466799999999999999999999999999999999999999999999999999999 99999988766543
No 5
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.65 E-value=1.6e-14 Score=113.76 Aligned_cols=106 Identities=17% Similarity=0.193 Sum_probs=82.3
Q ss_pred EEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHH-cCCCEEEEEEecCCHhHHHHHHh
Q 048770 124 NFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARK-NRMGAVVLTVQKANLLAMNFYLS 202 (243)
Q Consensus 124 ~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~-~~~~~i~l~v~~~N~~A~~fY~~ 202 (243)
+++..+|++||++.+...............++|+|+|||+|+|+.|++.++.+++. .+++.+.+.|...|.+|++||+
T Consensus 54 ~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~- 132 (162)
T PRK10140 54 LVACIDGDVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYK- 132 (162)
T ss_pred EEEEECCEEEEEEEEecccccccceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHH-
Confidence 44445799999999864322111212223589999999999999999999999988 5999999999999999999999
Q ss_pred CCCcEEeccCCCCCCCCCCCcceEEEEee
Q 048770 203 KLRYVVSSISPSRVDPFTGVEKSYEILCK 231 (243)
Q Consensus 203 klGF~~~~~~p~~~~~~~g~~~~y~il~k 231 (243)
++||+..+..+.... .+|...+..+|++
T Consensus 133 k~GF~~~g~~~~~~~-~~~~~~d~~~~~~ 160 (162)
T PRK10140 133 KYGFEIEGTGKKYAL-RNGEYVDAYYMAR 160 (162)
T ss_pred HCCCEEEeeccccee-eCCeEEEEEEEEe
Confidence 999999999887543 3455555566654
No 6
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.65 E-value=1.8e-14 Score=112.26 Aligned_cols=100 Identities=18% Similarity=0.296 Sum_probs=84.1
Q ss_pred eCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcE
Q 048770 128 SKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 128 ~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
.+|++||++.+..... ..++..++|+|++||+|+|+.|++.++..++..++..+.+.|...|.+|++||+ ++||+
T Consensus 47 ~~~~~vG~~~~~~~~~----~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~-k~Gf~ 121 (146)
T PRK09491 47 VNGQMAAFAITQVVLD----EATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYE-SLGFN 121 (146)
T ss_pred ECCeEEEEEEEEeecC----ceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHH-HcCCE
Confidence 4689999998754332 246788999999999999999999999999888999999999999999999999 99999
Q ss_pred EeccCCCCCCCCCCCcceEEEEeeec
Q 048770 208 VSSISPSRVDPFTGVEKSYEILCKVF 233 (243)
Q Consensus 208 ~~~~~p~~~~~~~g~~~~y~il~k~l 233 (243)
..+..+.......| ..+..+|.+++
T Consensus 122 ~~~~~~~~~~~~~~-~~d~~~~~~~~ 146 (146)
T PRK09491 122 EVTIRRNYYPTADG-REDAIIMALPL 146 (146)
T ss_pred EeeeeeccccCCCC-ceeEEEEeccC
Confidence 99887776543345 56777887764
No 7
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.64 E-value=4.8e-15 Score=127.21 Aligned_cols=146 Identities=15% Similarity=0.210 Sum_probs=108.1
Q ss_pred CCHHHHHHHHHHHHhhhhhhhcCCCCchhHhhHhhhccCCcceEEEEecCCCCcCcccccceEEeeeCCeEEEEEEEEee
Q 048770 62 LSSAEKQYILNLLKANMEGPYGSEWPAEEKVKRREMVASEARYIFARELDAPSASASEMSKTNFAESKGSIVGFVHFRFC 141 (243)
Q Consensus 62 l~~~~~~~i~~L~~~nm~~~y~~~w~~~~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~~~~ 141 (243)
+.++|.+.+.+|....+. .| .+++.......+...+...|+ ++..+|++||++.+...
T Consensus 121 a~~~D~~~l~~L~~~v~~-~~--~~~~~~~~~l~~~~~~~~~~~-------------------v~~~~g~iVG~~~~~~~ 178 (266)
T TIGR03827 121 ATEDDADAMAALYRKVFP-TY--PFPIHDPAYLLETMKSNVVYF-------------------GVEDGGKIIALASAEMD 178 (266)
T ss_pred CCHHHHHHHHHHHHHHhc-cC--CCCccCHHHHHHHhcCCcEEE-------------------EEEECCEEEEEEEEecC
Confidence 457888888888775432 22 222221111122222333333 33346999999987433
Q ss_pred ecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEeccCCCCCCCCCC
Q 048770 142 LEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSISPSRVDPFTG 221 (243)
Q Consensus 142 ~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~~~~~~~g 221 (243)
. ....++|..++|+|+|||+|+|+.||+.+++.++..|+..+++.+...|.+|..+|+ ++||+..++.+.... .+|
T Consensus 179 ~--~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~-k~GF~~~G~l~n~~~-i~G 254 (266)
T TIGR03827 179 P--ENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITFA-RLGYAYGGTLVNNTN-ISG 254 (266)
T ss_pred C--CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHHH-HcCCccccEEeecce-ecC
Confidence 3 234578999999999999999999999999999999999999999999999999999 999999999987764 457
Q ss_pred CcceEEEEeeec
Q 048770 222 VEKSYEILCKVF 233 (243)
Q Consensus 222 ~~~~y~il~k~l 233 (243)
...+..|+.|.|
T Consensus 255 ~~~d~~i~~k~l 266 (266)
T TIGR03827 255 GFESMNIWYKQL 266 (266)
T ss_pred CcccceeeeecC
Confidence 777888888865
No 8
>PRK03624 putative acetyltransferase; Provisional
Probab=99.61 E-value=1.9e-14 Score=110.06 Aligned_cols=83 Identities=24% Similarity=0.301 Sum_probs=71.3
Q ss_pred EEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhC
Q 048770 124 NFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSK 203 (243)
Q Consensus 124 ~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~k 203 (243)
+++..++++||++.+.... ...++..++|+|+|||+|+|+.|++.++..++..++..+.+.|...|..+++||+ +
T Consensus 48 ~v~~~~~~~vG~~~~~~~~----~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~-k 122 (140)
T PRK03624 48 LVAEVGGEVVGTVMGGYDG----HRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYE-A 122 (140)
T ss_pred EEEEcCCcEEEEEEeeccC----CCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHH-H
Confidence 4444478999999875322 2246788999999999999999999999999999999999999999999999999 9
Q ss_pred CCcEEecc
Q 048770 204 LRYVVSSI 211 (243)
Q Consensus 204 lGF~~~~~ 211 (243)
+||+..+.
T Consensus 123 ~GF~~~~~ 130 (140)
T PRK03624 123 LGYEEQDR 130 (140)
T ss_pred cCCccccE
Confidence 99997663
No 9
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.59 E-value=4.6e-14 Score=106.82 Aligned_cols=84 Identities=21% Similarity=0.383 Sum_probs=74.9
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEE
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVV 208 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~ 208 (243)
++++||++.+.... ...++..++|+|++||+|+|+.|++.++..+...++..+.+.|...|..++.||+ ++||+.
T Consensus 39 ~~~~vg~~~~~~~~----~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~-~~Gf~~ 113 (131)
T TIGR01575 39 GGKVVGYAGVQIVL----DEAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNIAAQALYK-KLGFNE 113 (131)
T ss_pred CCeEEEEEEEEecC----CCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccHHHHHHHH-HcCCCc
Confidence 68999999976543 2346889999999999999999999999999999999999999999999999999 999999
Q ss_pred eccCCCCCC
Q 048770 209 SSISPSRVD 217 (243)
Q Consensus 209 ~~~~p~~~~ 217 (243)
.+..+....
T Consensus 114 ~~~~~~~~~ 122 (131)
T TIGR01575 114 IAIRRNYYP 122 (131)
T ss_pred ccccccccc
Confidence 998886543
No 10
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.58 E-value=7.7e-14 Score=113.93 Aligned_cols=79 Identities=20% Similarity=0.217 Sum_probs=70.5
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEE
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVV 208 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~ 208 (243)
+|++||++.+..... ...++..++|+|++||+|+|+.|++.++++|++.|+..|.+.|...|.+|++||+ |+||+.
T Consensus 107 ~g~iiG~i~l~~~~~---~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~-klGF~~ 182 (191)
T TIGR02382 107 SGDPRGYVTLRELND---TDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYI-RSGANI 182 (191)
T ss_pred CCeEEEEEEEEecCC---CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHH-HcCCcc
Confidence 689999998863322 2457888999999999999999999999999999999999999999999999999 999998
Q ss_pred ecc
Q 048770 209 SSI 211 (243)
Q Consensus 209 ~~~ 211 (243)
.+.
T Consensus 183 ~~~ 185 (191)
T TIGR02382 183 EST 185 (191)
T ss_pred ccc
Confidence 764
No 11
>PTZ00330 acetyltransferase; Provisional
Probab=99.58 E-value=4.8e-14 Score=109.48 Aligned_cols=79 Identities=23% Similarity=0.272 Sum_probs=67.6
Q ss_pred eCCeEEEEEEEEeeec---CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCC
Q 048770 128 SKGSIVGFVHFRFCLE---EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKL 204 (243)
Q Consensus 128 ~~g~ivG~~~~~~~~~---~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~kl 204 (243)
.+|++||++.+..... .+...++|..++|+|+|||+|+|+.|++.+++.++..++..+.+.+ |.+|++||+ ++
T Consensus 59 ~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~---n~~a~~~y~-k~ 134 (147)
T PTZ00330 59 PTQRIVGTASLFVEPKFTRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDC---TEDMVAFYK-KL 134 (147)
T ss_pred CCCEEEEEEEEEeccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEec---ChHHHHHHH-HC
Confidence 4789999998764432 2334678999999999999999999999999999999999887765 789999999 99
Q ss_pred CcEEec
Q 048770 205 RYVVSS 210 (243)
Q Consensus 205 GF~~~~ 210 (243)
||+..+
T Consensus 135 GF~~~~ 140 (147)
T PTZ00330 135 GFRACE 140 (147)
T ss_pred CCEEec
Confidence 999876
No 12
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=5.1e-14 Score=107.94 Aligned_cols=82 Identities=21% Similarity=0.206 Sum_probs=75.1
Q ss_pred CCeEEEEEEEEeeec--CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCc
Q 048770 129 KGSIVGFVHFRFCLE--EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRY 206 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~--~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF 206 (243)
++.++||+.|-++.. .....+|+.+|+|.|+|||+|+|+.|++.+-+.|.+.|+.++...|...|++|+.||+ +.|+
T Consensus 63 ~~~~aGf~~yf~~ystW~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~-k~ga 141 (163)
T KOG3216|consen 63 GEVVAGFALYFNNYSTWLGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYE-KVGA 141 (163)
T ss_pred CCceeEEeeeecccccccccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHH-HhCc
Confidence 689999999865544 5668899999999999999999999999999999999999999999999999999999 9999
Q ss_pred EEecc
Q 048770 207 VVSSI 211 (243)
Q Consensus 207 ~~~~~ 211 (243)
+....
T Consensus 142 q~l~~ 146 (163)
T KOG3216|consen 142 QDLKE 146 (163)
T ss_pred cccce
Confidence 87653
No 13
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.57 E-value=7.3e-14 Score=110.64 Aligned_cols=89 Identities=24% Similarity=0.306 Sum_probs=74.7
Q ss_pred EEee-eCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHh
Q 048770 124 NFAE-SKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLS 202 (243)
Q Consensus 124 ~va~-~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~ 202 (243)
+++. .+|++||++.+.... .....+++..++|+|++||+|+|+.|++.+++.++..++..|.+.|...|.+|++||+
T Consensus 42 ~v~~~~~~~ivG~~~~~~~~-~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~- 119 (157)
T TIGR02406 42 IVAESEGGEIVGFVSGYLRP-DRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQASRALFK- 119 (157)
T ss_pred EEEEcCCCeEEEEEEEEecC-CCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHH-
Confidence 3444 368999998764333 3345678999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCC
Q 048770 203 KLRYVVSSISPS 214 (243)
Q Consensus 203 klGF~~~~~~p~ 214 (243)
|+||+.....++
T Consensus 120 k~G~~~~~~~~~ 131 (157)
T TIGR02406 120 ALARRRGVHLIE 131 (157)
T ss_pred HhCcccCCCeEe
Confidence 999988665444
No 14
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.56 E-value=3.2e-13 Score=107.18 Aligned_cols=106 Identities=20% Similarity=0.235 Sum_probs=90.3
Q ss_pred CCeEEEEEEEEeeec-CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcE
Q 048770 129 KGSIVGFVHFRFCLE-EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~-~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
+|+++|++.+..... ..........++|+|+.||+|+|+.|++.++..+...|++.+...+...|.++++|++ ++||+
T Consensus 61 ~g~v~G~a~~~~fr~r~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~lh~-~~GF~ 139 (169)
T COG1247 61 DGKVLGYASAGPFRERPAYRHTVELSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIALHE-KLGFE 139 (169)
T ss_pred CCeEEEEEEeeeccCccccceEEEEEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhHHHHH-HCCCE
Confidence 499999998864333 4445566789999999999999999999999999999999999999999999999999 99999
Q ss_pred EeccCCCCCCCCCCCcceEEEEeeecCcc
Q 048770 208 VSSISPSRVDPFTGVEKSYEILCKVFDNE 236 (243)
Q Consensus 208 ~~~~~p~~~~~~~g~~~~y~il~k~l~~~ 236 (243)
..++.|.. +...|...+-.+|.+.++..
T Consensus 140 ~~G~~~~v-g~k~g~wld~~~~~~~l~~~ 167 (169)
T COG1247 140 EVGTFPEV-GDKFGRWLDLVLMQLLLEEG 167 (169)
T ss_pred Eecccccc-ccccceEEeeeeeehhhccc
Confidence 99999986 44566777778888777654
No 15
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.55 E-value=2.6e-13 Score=111.01 Aligned_cols=79 Identities=25% Similarity=0.320 Sum_probs=70.6
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEE
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVV 208 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~ 208 (243)
+|++||++.+..... ...+|..++|.|+|||+|+|+.|++.+++++++.|++.+.+.|...|.+|++||+ ++||+.
T Consensus 110 ~g~~vG~~~l~~~~~---~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~ye-k~Gf~~ 185 (194)
T PRK10975 110 SGQIQGFVTLRELND---TDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYI-RSGANI 185 (194)
T ss_pred CCCEEEEEEEEecCC---CceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHH-HCCCeE
Confidence 589999998754322 3467888999999999999999999999999999999999999999999999999 999998
Q ss_pred ecc
Q 048770 209 SSI 211 (243)
Q Consensus 209 ~~~ 211 (243)
.++
T Consensus 186 ~~~ 188 (194)
T PRK10975 186 EST 188 (194)
T ss_pred eEE
Confidence 875
No 16
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.51 E-value=1.6e-12 Score=106.06 Aligned_cols=101 Identities=13% Similarity=0.139 Sum_probs=79.8
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHc-CCCEEEEEEecCCHhHHHHHHhCCCcE
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKN-RMGAVVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~-~~~~i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
+|++||++.+.......... ....+.|.|+|||+|+|+.+++.++++++.. |+++|.+.|...|.+|+++|+ |+||+
T Consensus 85 ~~~~iG~i~l~~~~~~~~~~-~eig~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~e-k~Gf~ 162 (194)
T PRK10809 85 EKEIIGVANFSNVVRGSFHA-CYLGYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLA-RLGFE 162 (194)
T ss_pred CCeEEEEEEEEeecCCCeee-EEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHH-HCCCc
Confidence 57999999986433222122 2346778999999999999999999999885 999999999999999999999 99999
Q ss_pred EeccCCCCCCCCCCCcceEEEEeee
Q 048770 208 VSSISPSRVDPFTGVEKSYEILCKV 232 (243)
Q Consensus 208 ~~~~~p~~~~~~~g~~~~y~il~k~ 232 (243)
..+..+.... .+|...+..++++.
T Consensus 163 ~~g~~~~~~~-~~g~~~d~~~~~~~ 186 (194)
T PRK10809 163 KEGYAKDYLL-IDGQWRDHVLTALT 186 (194)
T ss_pred EEeeeccccc-cCCeEEEEEEeeee
Confidence 9998776543 34555566666554
No 17
>PHA00673 acetyltransferase domain containing protein
Probab=99.51 E-value=6.3e-13 Score=104.06 Aligned_cols=132 Identities=12% Similarity=-0.011 Sum_probs=94.1
Q ss_pred ccCCCCCHHHHHHHHHHHHhhhhhhhcCCCCchhH---hhHhhh-ccCCcceEEEEecCCCCcCcccccceEEeeeCCeE
Q 048770 57 GCGDKLSSAEKQYILNLLKANMEGPYGSEWPAEEK---VKRREM-VASEARYIFARELDAPSASASEMSKTNFAESKGSI 132 (243)
Q Consensus 57 ~~~~~l~~~~~~~i~~L~~~nm~~~y~~~w~~~~~---~k~~el-~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~i 132 (243)
++..-+...|++.|..|+.+.....-. ++...+. .....+ .+|.. ..++++++|++
T Consensus 7 ~~~~~A~~~D~paI~~LLadd~l~~~r-~d~~~~~~y~~af~ai~~dp~~-------------------~llVa~~~g~v 66 (154)
T PHA00673 7 RRVAFAELADAPTFASLCAEYAHESAN-ADLAGRAPDHHAYAGMEAAGVA-------------------HFLGVFRGEEL 66 (154)
T ss_pred HHHhhccHhhHHHHHHHHHhccccccc-ccccccchhHHHHHHHHhCCCc-------------------EEEEEEECCEE
Confidence 345567889999999998873211111 1111000 001222 23333 33444457999
Q ss_pred EEEEEEEeeec---CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEe
Q 048770 133 VGFVHFRFCLE---EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVS 209 (243)
Q Consensus 133 vG~~~~~~~~~---~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~ 209 (243)
||++.+.+.+. .+...++|..|+|+|++||+|||+.||++++++|+..|+..+++...++ ...+.||. ++|++..
T Consensus 67 VG~~~l~~~p~l~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~-~~tv~fy~-~~g~~~~ 144 (154)
T PHA00673 67 VGFACLLVTPVPHFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTE-GRLVQLLP-AAGYRET 144 (154)
T ss_pred EEEEEEEEecCCccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCC-ccchHHHH-hCCchhh
Confidence 99998877664 3457789999999999999999999999999999999999999987774 34689999 9999876
Q ss_pred c
Q 048770 210 S 210 (243)
Q Consensus 210 ~ 210 (243)
.
T Consensus 145 ~ 145 (154)
T PHA00673 145 N 145 (154)
T ss_pred c
Confidence 5
No 18
>PRK10314 putative acyltransferase; Provisional
Probab=99.51 E-value=5.5e-13 Score=105.27 Aligned_cols=129 Identities=15% Similarity=0.164 Sum_probs=90.0
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHhhhhhhhcCCCCchhHhhHhhhcc--CCcceEEEEecCCCCcCcccccceEEeeeCC
Q 048770 53 HLESGCGDKLSSAEKQYILNLLKANMEGPYGSEWPAEEKVKRREMVA--SEARYIFARELDAPSASASEMSKTNFAESKG 130 (243)
Q Consensus 53 ~l~~~~~~~l~~~~~~~i~~L~~~nm~~~y~~~w~~~~~~k~~el~~--~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g 130 (243)
...+.+.++|+.+++..++.|-.+-+-... ..+..+. +-.+ +.+.++++ ..++
T Consensus 3 ~~~~~~~~~l~~~~~~~~~~lR~~VF~~eq--~~~~~e~----D~~d~~~~~~h~~~-------------------~~~~ 57 (153)
T PRK10314 3 EWQDLHHSELSVSQLYALLQLRCAVFVVEQ--NCPYQDI----DGDDLTGDNRHILG-------------------WKND 57 (153)
T ss_pred eeEecchhhCCHHHHHHHHHHHHHHhhhhc--CCCcccc----CCCCCCCCcEEEEE-------------------EECC
Confidence 456667789999999999888554432111 1211100 0001 12333333 3368
Q ss_pred eEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHc-CCCEEEEEEecCCHhHHHHHHhCCCcEEe
Q 048770 131 SIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKN-RMGAVVLTVQKANLLAMNFYLSKLRYVVS 209 (243)
Q Consensus 131 ~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~-~~~~i~l~v~~~N~~A~~fY~~klGF~~~ 209 (243)
++||++.+....+ .....+|..++|+|+|||+|+|+.||+.+++.++.. +...+.|.+ +..|..||+ ++||+..
T Consensus 58 ~~vg~~r~~~~~~-~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a---~~~a~~fY~-k~GF~~~ 132 (153)
T PRK10314 58 ELVAYARILKSDD-DLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGA---QAHLQNFYQ-SFGFIPV 132 (153)
T ss_pred EEEEEEEEecCCC-CCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEeh---HHHHHHHHH-HCCCEEC
Confidence 9999999865322 223578999999999999999999999999998775 777888876 457889999 9999998
Q ss_pred cc
Q 048770 210 SI 211 (243)
Q Consensus 210 ~~ 211 (243)
+.
T Consensus 133 g~ 134 (153)
T PRK10314 133 TE 134 (153)
T ss_pred CC
Confidence 85
No 19
>PHA01807 hypothetical protein
Probab=99.50 E-value=3.8e-13 Score=105.97 Aligned_cols=84 Identities=12% Similarity=0.113 Sum_probs=67.5
Q ss_pred EEeeeCCeEEEEEEEEeeecCC-cCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHh
Q 048770 124 NFAESKGSIVGFVHFRFCLEED-VPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLS 202 (243)
Q Consensus 124 ~va~~~g~ivG~~~~~~~~~~~-~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~ 202 (243)
++++.+|++|||+.+.+..... ...+.+..|+|.|+|||+|+|+.||+.++..|+..|+..|.++|...|.+|++||+
T Consensus 56 lva~~dg~lvG~~~l~~~~~~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~- 134 (153)
T PHA01807 56 LLVFRDGKLAGIAVLVFEDDPHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHYR- 134 (153)
T ss_pred EEEEECCEEEEEEEEEcCCCcceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHHH-
Confidence 4444579999999986544321 12233455799999999999999999999999999999999999999999999999
Q ss_pred CCCcEEec
Q 048770 203 KLRYVVSS 210 (243)
Q Consensus 203 klGF~~~~ 210 (243)
.|++-+
T Consensus 135 --~~~~~~ 140 (153)
T PHA01807 135 --RVKPYG 140 (153)
T ss_pred --hcCccC
Confidence 355544
No 20
>PRK10514 putative acetyltransferase; Provisional
Probab=99.49 E-value=1.3e-12 Score=101.32 Aligned_cols=75 Identities=23% Similarity=0.321 Sum_probs=63.5
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEE
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVV 208 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~ 208 (243)
+|++||++.+.. .++..++|+|+|||+|+|+.||+.+.+.+ .++.+.|...|.+|++||+ |+||+.
T Consensus 58 ~~~~iG~~~~~~--------~~~~~~~v~p~~rgkGig~~Ll~~~~~~~-----~~i~~~v~~~N~~a~~~ye-k~Gf~~ 123 (145)
T PRK10514 58 RDQPVGFMLLSG--------GHMEALFVDPDVRGCGVGRMLVEHALSLH-----PELTTDVNEQNEQAVGFYK-KMGFKV 123 (145)
T ss_pred CCcEEEEEEEec--------CcEeEEEECHHhccCCHHHHHHHHHHHhc-----cccEEEeecCCHHHHHHHH-HCCCEE
Confidence 689999988731 23567899999999999999999988753 4678999999999999999 999999
Q ss_pred eccCCCCCC
Q 048770 209 SSISPSRVD 217 (243)
Q Consensus 209 ~~~~p~~~~ 217 (243)
.+..+...+
T Consensus 124 ~~~~~~~~~ 132 (145)
T PRK10514 124 TGRSEVDDQ 132 (145)
T ss_pred ecccccCCC
Confidence 998886543
No 21
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.49 E-value=2.2e-12 Score=104.52 Aligned_cols=107 Identities=20% Similarity=0.167 Sum_probs=83.0
Q ss_pred eEEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHc-CCCEEEEEEecCCHhHHHHHH
Q 048770 123 TNFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKN-RMGAVVLTVQKANLLAMNFYL 201 (243)
Q Consensus 123 ~~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~-~~~~i~l~v~~~N~~A~~fY~ 201 (243)
.|++..+|++||++.+....... ....+ .++|+|+|||+|+|+.+++.+.+++... ++++|.+.|...|.+|++||+
T Consensus 59 ~~~i~~~g~~iG~~~~~~~~~~~-~~~~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~ye 136 (186)
T PRK15130 59 RFVVECDGEKAGLVELVEINHVH-RRAEF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYR 136 (186)
T ss_pred EEEEEECCEEEEEEEEEeecCCC-CeEEE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHH
Confidence 45555679999999876443222 22333 6899999999999999999999999864 999999999999999999999
Q ss_pred hCCCcEEeccCCCCCCCCCCCcceEEEEeeec
Q 048770 202 SKLRYVVSSISPSRVDPFTGVEKSYEILCKVF 233 (243)
Q Consensus 202 ~klGF~~~~~~p~~~~~~~g~~~~y~il~k~l 233 (243)
++||+..+..+.... .+|...+..+|+..-
T Consensus 137 -k~GF~~~~~~~~~~~-~~g~~~d~~~~~~~~ 166 (186)
T PRK15130 137 -KLGFEVEGELIHEFF-INGEYRNTIRMCIFQ 166 (186)
T ss_pred -HCCCEEEEEEeheEE-ECCEEEEEEEEEeeH
Confidence 999999998876543 345555555555543
No 22
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.49 E-value=7.8e-13 Score=106.49 Aligned_cols=109 Identities=12% Similarity=0.195 Sum_probs=86.9
Q ss_pred EEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHc-CCCEEEEEEecCCHhHHHHHHh
Q 048770 124 NFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKN-RMGAVVLTVQKANLLAMNFYLS 202 (243)
Q Consensus 124 ~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~-~~~~i~l~v~~~N~~A~~fY~~ 202 (243)
+++..+|++||++.+....... ..+.+ .+.|+|+|||+|+|+.++..+.++++.. ++++|.+.|...|.+|+++|+
T Consensus 70 ~~i~~~~~~iG~~~l~~~~~~~-~~~~i-g~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~e- 146 (179)
T PRK10151 70 FMIFKEDELIGVLSFNRIEPLN-KTAYI-GYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVAL- 146 (179)
T ss_pred EEEEECCEEEEEEEEEeeccCC-CceEE-EEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHH-
Confidence 3333468999999886443222 23444 4578999999999999999999999875 899999999999999999999
Q ss_pred CCCcEEeccCCCCCCCCCCCcceEEEEeeecCcc
Q 048770 203 KLRYVVSSISPSRVDPFTGVEKSYEILCKVFDNE 236 (243)
Q Consensus 203 klGF~~~~~~p~~~~~~~g~~~~y~il~k~l~~~ 236 (243)
|+||+..++.+.... .+|...+..++++.+.++
T Consensus 147 k~Gf~~~g~~~~~~~-~~g~~~D~~~~~~~~~~~ 179 (179)
T PRK10151 147 RNGFTLEGCLKQAEY-LNGAYDDVNLYARIIDSD 179 (179)
T ss_pred HCCCEEEeEeccceE-ECCEEEEEEEEEEeecCC
Confidence 999999999887654 356667778888887654
No 23
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.48 E-value=5.6e-13 Score=93.14 Aligned_cols=76 Identities=29% Similarity=0.430 Sum_probs=61.8
Q ss_pred ceEEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHH
Q 048770 122 KTNFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYL 201 (243)
Q Consensus 122 ~~~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~ 201 (243)
..+++.+++++||++.+.... +..+|..++|+|++||+|+|+.||+.+...+ +...+++.+ |..+..||+
T Consensus 4 ~~~~~~~~~~ivG~~~~~~~~----~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~---~~~~i~l~~---~~~~~~fY~ 73 (79)
T PF13508_consen 4 RFFVAEDDGEIVGFIRLWPNE----DFAYIGYLAVDPEYRGKGIGSKLLNYLLEKA---KSKKIFLFT---NPAAIKFYE 73 (79)
T ss_dssp EEEEEEETTEEEEEEEEEETT----TEEEEEEEEE-GGGTTSSHHHHHHHHHHHHH---TCSEEEEEE---EHHHHHHHH
T ss_pred EEEEEEECCEEEEEEEEEEcC----CEEEEEEEEECHHHcCCCHHHHHHHHHHHHc---CCCcEEEEE---cHHHHHHHH
Confidence 467777799999999984322 3679999999999999999999999997777 335677766 568999999
Q ss_pred hCCCcEE
Q 048770 202 SKLRYVV 208 (243)
Q Consensus 202 ~klGF~~ 208 (243)
++||++
T Consensus 74 -~~GF~~ 79 (79)
T PF13508_consen 74 -KLGFEE 79 (79)
T ss_dssp -HTTEEE
T ss_pred -HCcCCC
Confidence 999985
No 24
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.48 E-value=9e-13 Score=105.37 Aligned_cols=86 Identities=24% Similarity=0.389 Sum_probs=74.3
Q ss_pred eEEEEEEEEeeecCC--cCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCC-CEEEEEEecCCHhHHHHHHhCCCcE
Q 048770 131 SIVGFVHFRFCLEED--VPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRM-GAVVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 131 ~ivG~~~~~~~~~~~--~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~-~~i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
.++||+.+....... ....+|..|.|+|+|||+|||+.|++.++..+...+. ..+.|.|..+|.+|++||+ ++||+
T Consensus 72 ~~~G~~~~~~~~~~~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~-~~GF~ 150 (177)
T COG0456 72 KVVGFLLVRVVDGRPSADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYR-KLGFE 150 (177)
T ss_pred ceeEEEEEEEecCCccccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHH-HcCCE
Confidence 599999886433321 1257899999999999999999999999999999986 8999999999999999999 99999
Q ss_pred EeccCCCCCC
Q 048770 208 VSSISPSRVD 217 (243)
Q Consensus 208 ~~~~~p~~~~ 217 (243)
..+..+..+.
T Consensus 151 ~~~~~~~yy~ 160 (177)
T COG0456 151 VVKIRKNYYA 160 (177)
T ss_pred EEeeehhhcc
Confidence 9998876554
No 25
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.47 E-value=1.3e-12 Score=122.58 Aligned_cols=82 Identities=18% Similarity=0.206 Sum_probs=70.5
Q ss_pred CCeEEEEEEEEeee---cCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCC
Q 048770 129 KGSIVGFVHFRFCL---EEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLR 205 (243)
Q Consensus 129 ~g~ivG~~~~~~~~---~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klG 205 (243)
+|++|||+.+.... .+.....++..|+|+|+|||+|+|+.||+.+++.++..|+..+.|.|..+|.+|++||+ ++|
T Consensus 133 ~g~IVG~~~~~~~~~~~~d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~-klG 211 (547)
T TIGR03103 133 SGAIIGTVMGVDHRKAFNDPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYE-KLG 211 (547)
T ss_pred CCeEEEEEEEEeccccccCCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHH-HCC
Confidence 58999998753221 12233467899999999999999999999999999999999999999999999999999 999
Q ss_pred cEEecc
Q 048770 206 YVVSSI 211 (243)
Q Consensus 206 F~~~~~ 211 (243)
|+....
T Consensus 212 f~~~~~ 217 (547)
T TIGR03103 212 FRRIPV 217 (547)
T ss_pred CEEeeE
Confidence 998764
No 26
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.47 E-value=7.1e-13 Score=103.57 Aligned_cols=79 Identities=27% Similarity=0.309 Sum_probs=67.9
Q ss_pred CCeEEEEEEEEeee---cCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCC
Q 048770 129 KGSIVGFVHFRFCL---EEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLR 205 (243)
Q Consensus 129 ~g~ivG~~~~~~~~---~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klG 205 (243)
+|++||++.+.+.. .......++..++|+|+|||+|||+.|++.++++|++.|+++|.+.|...|. +||+ ++|
T Consensus 63 ~~~ivG~~~~~~~~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~---~~y~-k~G 138 (150)
T PLN02706 63 SGRIIATGSVFVERKFIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENK---AFYE-KCG 138 (150)
T ss_pred CCcEEEEEEEEEEeecccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccH---HHHH-HCc
Confidence 48999998875332 1234567888999999999999999999999999999999999999999996 6999 999
Q ss_pred cEEecc
Q 048770 206 YVVSSI 211 (243)
Q Consensus 206 F~~~~~ 211 (243)
|+..+.
T Consensus 139 F~~~g~ 144 (150)
T PLN02706 139 YVRKEI 144 (150)
T ss_pred CEEehh
Confidence 998763
No 27
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.47 E-value=7.9e-13 Score=98.56 Aligned_cols=72 Identities=29% Similarity=0.417 Sum_probs=57.4
Q ss_pred eEEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHh
Q 048770 123 TNFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLS 202 (243)
Q Consensus 123 ~~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~ 202 (243)
+++++.+|++|||+.+. . ...|..++|+|+|||+|+|+.|++.++..++. ++..+.+. .|..|.+||+
T Consensus 46 ~~v~~~~~~ivG~~~~~---~----~~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~---~~~~a~~~y~- 113 (117)
T PF13673_consen 46 IFVAEEGGEIVGFAWLE---P----DGEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVE---ANERARRFYR- 113 (117)
T ss_dssp EEEEEETTEEEEEEEEE---T----CEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEE---C-HHHHHHHH-
T ss_pred EEEEEECCEEEEEEEEc---C----CCeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEE---eCHHHHHHHH-
Confidence 44555579999999985 1 12388899999999999999999999999866 87766665 8899999999
Q ss_pred CCCc
Q 048770 203 KLRY 206 (243)
Q Consensus 203 klGF 206 (243)
++||
T Consensus 114 ~~GF 117 (117)
T PF13673_consen 114 KLGF 117 (117)
T ss_dssp HTT-
T ss_pred hCCC
Confidence 9998
No 28
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.47 E-value=5.8e-13 Score=104.39 Aligned_cols=85 Identities=24% Similarity=0.339 Sum_probs=71.6
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHH-HHcCCCEEEEEEecCCHhHHHHHHhCCCcE
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIA-RKNRMGAVVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a-~~~~~~~i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
+|++||++.+..... ....+.+ .+.|.|++|++|+|+.|+..++.+| ...|+++|.+.|...|.+|++||+ ++||+
T Consensus 59 ~g~iiG~~~~~~~~~-~~~~~~~-~~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~-~~GF~ 135 (155)
T PF13420_consen 59 DGKIIGYVSLRDIDP-YNHTAEL-SIYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYK-KLGFE 135 (155)
T ss_dssp TTEEEEEEEEEESSS-GTTEEEE-EEEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHH-HTTEE
T ss_pred CCcEEEEEEEEeeec-cCCEEEE-eeEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHH-hCCCE
Confidence 699999999874322 3344444 4888899999999999999999999 888999999999999999999999 99999
Q ss_pred EeccCCCCC
Q 048770 208 VSSISPSRV 216 (243)
Q Consensus 208 ~~~~~p~~~ 216 (243)
..+..+...
T Consensus 136 ~~g~~~~~~ 144 (155)
T PF13420_consen 136 EEGELKDHI 144 (155)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEecEE
Confidence 999888754
No 29
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.46 E-value=2.2e-12 Score=101.01 Aligned_cols=130 Identities=17% Similarity=0.203 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHhhh-hhhhcCCCCchhHhhHh-hhc-cCCcceEEEEecCCCCcCcccccceEEeeeCCeEEEEEEEEe
Q 048770 64 SAEKQYILNLLKANM-EGPYGSEWPAEEKVKRR-EMV-ASEARYIFARELDAPSASASEMSKTNFAESKGSIVGFVHFRF 140 (243)
Q Consensus 64 ~~~~~~i~~L~~~nm-~~~y~~~w~~~~~~k~~-el~-~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~~~ 140 (243)
+.|++.|..++.+.- ...+...|......... .+. ++.. ..+|++.+|+++||+.+..
T Consensus 7 ~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------~~~v~~~dg~~~g~~~~~~ 67 (152)
T PF13523_consen 7 PDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGH-------------------HPYVAEDDGEPIGYFEIYW 67 (152)
T ss_dssp GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTE-------------------EEEEEEETTEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCc-------------------eEEEEEECCEEEEEEEEec
Confidence 778888888877653 33333445432111111 221 2222 3445555899999997742
Q ss_pred eec---CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHc-CCCEEEEEEecCCHhHHHHHHhCCCcEEeccCC
Q 048770 141 CLE---EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKN-RMGAVVLTVQKANLLAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 141 ~~~---~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~-~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p 213 (243)
... .......+..+.++|++||+|+|+.+++.++..+.+. +++.|.+.|...|.+|+++|+ |+||+.+++..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~-k~GF~~~g~~~ 143 (152)
T PF13523_consen 68 PDEDYDADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYE-KAGFRKVGEFE 143 (152)
T ss_dssp GGGSS---TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHH-HTT-EEEEEEE
T ss_pred ccccccCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHH-HcCCEEeeEEE
Confidence 111 1345566888889999999999999999999999887 899999999999999999999 99999999654
No 30
>PRK09831 putative acyltransferase; Provisional
Probab=99.44 E-value=2.6e-12 Score=100.37 Aligned_cols=139 Identities=12% Similarity=0.141 Sum_probs=88.7
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhcCCCCchhHhhHhhhccCC-cceEEEEecCCCCcCcccccceEEeeeCCeEEEEEEE
Q 048770 60 DKLSSAEKQYILNLLKANMEGPYGSEWPAEEKVKRREMVASE-ARYIFARELDAPSASASEMSKTNFAESKGSIVGFVHF 138 (243)
Q Consensus 60 ~~l~~~~~~~i~~L~~~nm~~~y~~~w~~~~~~k~~el~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~ 138 (243)
..+++.|...+.++........+...++.+... .+.... ..+. ........+++..+|++||++.+
T Consensus 4 r~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----------~~~~~~~~~v~~~~~~iiG~~~~ 70 (147)
T PRK09831 4 RNYQPGDFQQLCAIFIRAVTMTASQHYSPQQIA---AWAQIDESRWK----------EKLAKSQVRVAVINAQPVGFITC 70 (147)
T ss_pred ccCChhhHHHHHHHHHHHHHHhhhhcCCHHHHH---hccCCCHHHHH----------HHHhcCceEEEEECCEEEEEEEe
Confidence 456778888888887766655443222221110 000000 0000 00001234555668999999886
Q ss_pred EeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEeccCCCCCCC
Q 048770 139 RFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSISPSRVDP 218 (243)
Q Consensus 139 ~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~~~~~ 218 (243)
.. .++..++|+|++||+|+|+.||+.+++.+.. +++.. |..|++||+ ++||+..+..+..
T Consensus 71 ~~--------~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-------l~v~~-~~~a~~~Y~-k~Gf~~~g~~~~~--- 130 (147)
T PRK09831 71 IE--------HYIDMLFVDPEYTRRGVASALLKPLIKSESE-------LTVDA-SITAKPFFE-RYGFQTVKQQRVE--- 130 (147)
T ss_pred hh--------ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-------eEeec-chhhHHHHH-HCCCEEeeccceE---
Confidence 31 3678899999999999999999999988754 45544 578999999 9999999987742
Q ss_pred CCCCcceEEEEee
Q 048770 219 FTGVEKSYEILCK 231 (243)
Q Consensus 219 ~~g~~~~y~il~k 231 (243)
..|...+-.+|.|
T Consensus 131 ~~g~~~~~~~m~~ 143 (147)
T PRK09831 131 CRGEWFINFYMRY 143 (147)
T ss_pred ECCEEEEeeEEEe
Confidence 2344555556655
No 31
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.43 E-value=5.6e-12 Score=109.18 Aligned_cols=127 Identities=15% Similarity=0.108 Sum_probs=88.2
Q ss_pred cCCCCCHHHHHHHHHHHHhhhhhhhcCCCCchhHhhHhhhccCCcceEEEEecCCCCcCcccccceEEeeeCCeEEEEEE
Q 048770 58 CGDKLSSAEKQYILNLLKANMEGPYGSEWPAEEKVKRREMVASEARYIFARELDAPSASASEMSKTNFAESKGSIVGFVH 137 (243)
Q Consensus 58 ~~~~l~~~~~~~i~~L~~~nm~~~y~~~w~~~~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~ 137 (243)
+.+.++++|+..+.+|+..--...-...|..+. ..++..+.. .....+++..+|++||++.
T Consensus 2 ~~~~l~~~d~~~v~~L~~~~~~~~~~~~~~~~~---~~~~~~~~~----------------~~~~~~~~~~~~~~vG~~~ 62 (292)
T TIGR03448 2 WRAALDADLRRDVRELLAAATAVDGVAPVSEQV---LRGLREPGA----------------GHTRHLVAVDSDPIVGYAN 62 (292)
T ss_pred ccccCCHHHHHHHHHHHHHHHhcCCCCCCCHHH---HhhccccCC----------------CCceEEEEEECCEEEEEEE
Confidence 456789999999999987432211112455322 123322110 0112344455799999998
Q ss_pred EEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEecc
Q 048770 138 FRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSI 211 (243)
Q Consensus 138 ~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~ 211 (243)
+...... ..++..++|+|+|||+|||+.||+.++..+. ..+.+.|...|..|++||+ ++||+....
T Consensus 63 ~~~~~~~---~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n~~a~~fy~-~~Gf~~~~~ 128 (292)
T TIGR03448 63 LVPARGT---DPAMAELVVHPAHRRRGIGRALIRALLAKGG----GRLRVWAHGDLPAARALAS-RLGLVPTRE 128 (292)
T ss_pred EEcCCCC---cceEEEEEECHhhcCCCHHHHHHHHHHHhcc----CceEEEEcCCCHHHHHHHH-HCCCEEccE
Confidence 7654322 2468899999999999999999999988753 4678888889999999999 999987753
No 32
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.42 E-value=9.2e-12 Score=97.53 Aligned_cols=100 Identities=13% Similarity=0.065 Sum_probs=77.0
Q ss_pred EEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHH-cCCCEEEEEEecCCHhHHHHHHh
Q 048770 124 NFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARK-NRMGAVVLTVQKANLLAMNFYLS 202 (243)
Q Consensus 124 ~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~-~~~~~i~l~v~~~N~~A~~fY~~ 202 (243)
+++..+|++||++.+..... ......+ .+++.|.+| +|+|+.++..++++|++ .+++.|.+.|...|.+|++||+
T Consensus 54 ~~~~~~g~~vG~~~~~~~~~-~~~~~~~-g~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~- 129 (156)
T TIGR03585 54 WIVCQESRPIGVISFTDINL-VHKSAFW-GIYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYE- 129 (156)
T ss_pred EEEEECCEEEEEEEEEecCh-hhCeEEE-EEEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHH-
Confidence 44445799999999864432 1233444 355899999 99999999999999986 4999999999999999999999
Q ss_pred CCCcEEeccCCCCCCCCCCCcceEEE
Q 048770 203 KLRYVVSSISPSRVDPFTGVEKSYEI 228 (243)
Q Consensus 203 klGF~~~~~~p~~~~~~~g~~~~y~i 228 (243)
++||+..+..+.... .+|...|-.+
T Consensus 130 k~Gf~~~g~~~~~~~-~~g~~~d~~~ 154 (156)
T TIGR03585 130 KFGFEREGVFRQGIF-KEGEYYDVLL 154 (156)
T ss_pred HcCCeEeeeehhhee-ECCeEEEEEE
Confidence 999999998776543 2344444443
No 33
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.41 E-value=2.2e-12 Score=111.75 Aligned_cols=82 Identities=26% Similarity=0.371 Sum_probs=70.4
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEE
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVV 208 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~ 208 (243)
+|++|||+.+..... .....+++.+.|+|+|||+|||+.|+..++.+++..|+..+.+.|...|.+|++||+ ++||+.
T Consensus 208 ~~~~vG~~~~~~~~~-~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~y~-k~GF~~ 285 (292)
T TIGR03448 208 PGELLGFHWTKVHPD-EPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRTYE-KLGFTV 285 (292)
T ss_pred CCcEEEEEEEEecCC-CCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHHHH-HcCCEE
Confidence 589999976554332 223467788899999999999999999999999999999999999999999999999 999998
Q ss_pred eccC
Q 048770 209 SSIS 212 (243)
Q Consensus 209 ~~~~ 212 (243)
.+..
T Consensus 286 ~~~~ 289 (292)
T TIGR03448 286 AEVD 289 (292)
T ss_pred cccc
Confidence 7643
No 34
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.40 E-value=2.3e-11 Score=107.15 Aligned_cols=76 Identities=17% Similarity=0.270 Sum_probs=67.5
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEec--CCHhHHHHHHhCCCc
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQK--ANLLAMNFYLSKLRY 206 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~--~N~~A~~fY~~klGF 206 (243)
++.+||++.+... ...++|..++|+|.+||+|+|+.||..+...|++.|+..|.|++.+ .|.+|+.||+ ++||
T Consensus 242 d~givG~~~~~~~----~~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~fY~-~~GF 316 (320)
T TIGR01686 242 DSGIIGIFVFEKK----EGNLFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFLSFYE-QIGF 316 (320)
T ss_pred CCceEEEEEEEec----CCcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHHHHHH-HcCC
Confidence 4679999987543 2457899999999999999999999999999999999999999864 7999999999 9999
Q ss_pred EEe
Q 048770 207 VVS 209 (243)
Q Consensus 207 ~~~ 209 (243)
+..
T Consensus 317 ~~~ 319 (320)
T TIGR01686 317 EDE 319 (320)
T ss_pred ccC
Confidence 854
No 35
>PRK10562 putative acetyltransferase; Provisional
Probab=99.38 E-value=2e-11 Score=95.03 Aligned_cols=91 Identities=25% Similarity=0.271 Sum_probs=69.8
Q ss_pred eEEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHh
Q 048770 123 TNFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLS 202 (243)
Q Consensus 123 ~~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~ 202 (243)
.+++..+|++||++.+... .++..++|+|+|||+|+|+.||+.+... +..+.+.|...|..|++||+
T Consensus 50 ~~v~~~~~~~iG~~~~~~~-------~~i~~~~v~~~~rg~G~g~~ll~~~~~~-----~~~~~~~v~~~N~~s~~~y~- 116 (145)
T PRK10562 50 TWVWEEDGKLLGFVSVLEG-------RFVGALFVAPKAVRRGIGKALMQHVQQR-----YPHLSLEVYQKNQRAVNFYH- 116 (145)
T ss_pred EEEEEECCEEEEEEEEeec-------cEEEEEEECHHHcCCCHHHHHHHHHHhh-----CCeEEEEEEcCChHHHHHHH-
Confidence 3444557899999987421 2477799999999999999999888663 56789999999999999999
Q ss_pred CCCcEEeccCCCCCCCCCCCcceEEEEee
Q 048770 203 KLRYVVSSISPSRVDPFTGVEKSYEILCK 231 (243)
Q Consensus 203 klGF~~~~~~p~~~~~~~g~~~~y~il~k 231 (243)
++||+..+.... +.++ .+..||.-
T Consensus 117 k~Gf~~~~~~~~---~~~~--~~~~~~~~ 140 (145)
T PRK10562 117 AQGFRIVDSAWQ---EETQ--HPTWIMSW 140 (145)
T ss_pred HCCCEEcccccc---CCCC--CEEEEEEe
Confidence 999999986433 2222 35666654
No 36
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.37 E-value=1.4e-11 Score=98.76 Aligned_cols=77 Identities=17% Similarity=0.352 Sum_probs=65.2
Q ss_pred eCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcE
Q 048770 128 SKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 128 ~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
.+|++||++.+..... ..+.|..++|+|++||+|+|+.||+.+++.|+..|+..+.+.+. +++||+ |+||+
T Consensus 53 ~~~~iiG~~~~~~~~~---~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~-----~~~fY~-k~GF~ 123 (169)
T PRK07922 53 LDGEVVGCGALHVMWE---DLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTF-----EVEFFA-RHGFV 123 (169)
T ss_pred cCCcEEEEEEEeecCC---CceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEec-----cHHHHH-HCCCE
Confidence 4789999998754332 34678899999999999999999999999999999999988764 368999 99999
Q ss_pred EeccCC
Q 048770 208 VSSISP 213 (243)
Q Consensus 208 ~~~~~p 213 (243)
..+..+
T Consensus 124 ~~~~~~ 129 (169)
T PRK07922 124 EIDGTP 129 (169)
T ss_pred ECcccc
Confidence 987654
No 37
>PLN02825 amino-acid N-acetyltransferase
Probab=99.35 E-value=2.5e-11 Score=112.25 Aligned_cols=136 Identities=16% Similarity=0.221 Sum_probs=94.6
Q ss_pred ccccCCeEEEEE---eccCCCCCHHHHHHHHHHHHhhhhhhhcCCCCchhHhhHhhhccCCcceEEEEecCCCCcCcccc
Q 048770 44 QYERNGLSVHLE---SGCGDKLSSAEKQYILNLLKANMEGPYGSEWPAEEKVKRREMVASEARYIFARELDAPSASASEM 120 (243)
Q Consensus 44 ~~~~~g~~~~l~---~~~~~~l~~~~~~~i~~L~~~nm~~~y~~~w~~~~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~ 120 (243)
=|.++|.--.+. +.....++.+|+..|.+|+.......+...|.. + .+......|
T Consensus 352 lft~dg~gt~i~~~~~e~IR~At~eDi~~I~~Li~~lee~g~lv~rs~-e-----~le~ei~~f---------------- 409 (515)
T PLN02825 352 LFTRDGMGTMIASDMYEGTRMARVEDLAGIRQIIRPLEESGILVRRTD-E-----ELLRALDSF---------------- 409 (515)
T ss_pred hhccCCceeEeccChHhhheeCCHHHHHHHHHHHHHHHHcCCCcCCCH-H-----HHHhcCCcE----------------
Confidence 466666643333 334456889999999999875332211112221 1 111111223
Q ss_pred cceEEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHH
Q 048770 121 SKTNFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFY 200 (243)
Q Consensus 121 ~~~~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY 200 (243)
++++.||++|||+.+....+ ...+++..|+|+|+|||+|+|+.||+.+++.|++.|+..+.+.+. .+.+||
T Consensus 410 ---~V~e~Dg~IVG~aal~~~~~--~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Lltt----~a~~fY 480 (515)
T PLN02825 410 ---VVVEREGSIIACAALFPFFE--EKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLTT----RTADWF 480 (515)
T ss_pred ---EEEEECCEEEEEEEEEeecC--CCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeC----cHHHHH
Confidence 33344799999998754332 345788999999999999999999999999999999999999772 478999
Q ss_pred HhCCCcEEecc
Q 048770 201 LSKLRYVVSSI 211 (243)
Q Consensus 201 ~~klGF~~~~~ 211 (243)
+ ++||+..+.
T Consensus 481 ~-k~GF~~~~~ 490 (515)
T PLN02825 481 V-RRGFSECSI 490 (515)
T ss_pred H-HCCCEEeCh
Confidence 9 999998765
No 38
>PRK07757 acetyltransferase; Provisional
Probab=99.33 E-value=3.4e-11 Score=94.19 Aligned_cols=78 Identities=22% Similarity=0.309 Sum_probs=64.7
Q ss_pred EeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCC
Q 048770 125 FAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKL 204 (243)
Q Consensus 125 va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~kl 204 (243)
++..+|++||++.+.... ....++..++|+|+|||+|+|+.|++.++..+.+.|+..+.+.+. +.+||+ ++
T Consensus 45 i~~~~~~lvG~~~l~~~~---~~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~-----~~~~Y~-k~ 115 (152)
T PRK07757 45 VAEEEGEIVGCCALHILW---EDLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTY-----QPEFFE-KL 115 (152)
T ss_pred EEEECCEEEEEEEEEecc---CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC-----cHHHHH-HC
Confidence 334479999999986433 234678899999999999999999999999999989998877653 358999 99
Q ss_pred CcEEecc
Q 048770 205 RYVVSSI 211 (243)
Q Consensus 205 GF~~~~~ 211 (243)
||+..+.
T Consensus 116 GF~~~~~ 122 (152)
T PRK07757 116 GFREVDK 122 (152)
T ss_pred CCEEccc
Confidence 9999876
No 39
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=99.33 E-value=8e-12 Score=96.42 Aligned_cols=89 Identities=25% Similarity=0.357 Sum_probs=75.6
Q ss_pred CCeEEEEEEEEeee--cCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHH-cCCCEEEEEEecCCHhHHHHHHhCCC
Q 048770 129 KGSIVGFVHFRFCL--EEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARK-NRMGAVVLTVQKANLLAMNFYLSKLR 205 (243)
Q Consensus 129 ~g~ivG~~~~~~~~--~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~-~~~~~i~l~v~~~N~~A~~fY~~klG 205 (243)
+|+|||++...... ++..+.+.|+.|.|...||+.|||+.||........+ .+...|.|.|.++|.+|+.+|.+.+|
T Consensus 50 ~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~tl~ 129 (193)
T KOG3235|consen 50 NGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKNTLG 129 (193)
T ss_pred CCcEEEEeeeehhhcccCCCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhhhccc
Confidence 79999999765433 3556688999999999999999999999665554444 48899999999999999999998999
Q ss_pred cEEeccCCCCCC
Q 048770 206 YVVSSISPSRVD 217 (243)
Q Consensus 206 F~~~~~~p~~~~ 217 (243)
|++.+..|..+.
T Consensus 130 F~v~eve~kYYa 141 (193)
T KOG3235|consen 130 FVVCEVEPKYYA 141 (193)
T ss_pred eEEeeccccccc
Confidence 999999888654
No 40
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.31 E-value=5.4e-11 Score=109.17 Aligned_cols=80 Identities=20% Similarity=0.263 Sum_probs=66.5
Q ss_pred EeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCC
Q 048770 125 FAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKL 204 (243)
Q Consensus 125 va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~kl 204 (243)
+++.++++||++.+..... ...++|..++|+|+|||+|+|+.||+.++.+|++.|+..+.+.+ ..|++||+ ++
T Consensus 338 va~~dg~iVG~~~~~~~~~--~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~----~~a~~fY~-k~ 410 (441)
T PRK05279 338 VIERDGLIIGCAALYPFPE--EKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLT----TRTAHWFL-ER 410 (441)
T ss_pred EEEECCEEEEEEEEEEcCC--CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEec----chHHHHHH-HC
Confidence 3444799999987754322 34578999999999999999999999999999999999887643 45899999 99
Q ss_pred CcEEecc
Q 048770 205 RYVVSSI 211 (243)
Q Consensus 205 GF~~~~~ 211 (243)
||+..+.
T Consensus 411 GF~~~g~ 417 (441)
T PRK05279 411 GFVPVDV 417 (441)
T ss_pred cCEECCh
Confidence 9999886
No 41
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.25 E-value=1.2e-10 Score=106.53 Aligned_cols=123 Identities=15% Similarity=0.148 Sum_probs=85.9
Q ss_pred cCCCCCHHHHHHHHHHHHhhhhhhhcCCCCchhHhhHhhhccCCcceEEEEecCCCCcCcccccceEEeeeCCeEEEEEE
Q 048770 58 CGDKLSSAEKQYILNLLKANMEGPYGSEWPAEEKVKRREMVASEARYIFARELDAPSASASEMSKTNFAESKGSIVGFVH 137 (243)
Q Consensus 58 ~~~~l~~~~~~~i~~L~~~nm~~~y~~~w~~~~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~ 137 (243)
....+++.|++.+.+|+.. .....|..... ...+..+...|++ ++.+|++|||+.
T Consensus 284 ~IR~at~~Dl~~I~~L~~~----~~~~~~~~~~~--~~~l~~~~~~~~V-------------------~~~dg~iVG~~~ 338 (429)
T TIGR01890 284 SIRQATIDDIGGIAALIRP----LEEQGILVRRS--REYLEREISEFSI-------------------IEHDGNIIGCAA 338 (429)
T ss_pred heEECCHHHHHHHHHHHHH----HHHcCCchhhh--HHHHHhhcCcEEE-------------------EEECCEEEEEEE
Confidence 3556788999999998752 22223322111 1112112222333 334699999998
Q ss_pred EEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEeccC
Q 048770 138 FRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSIS 212 (243)
Q Consensus 138 ~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~ 212 (243)
+....+ ....++..++|+|+|||+|+|+.||+.++.+|++.|+..+.+. ..| +.+||+ ++||+..+..
T Consensus 339 ~~~~~~--~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~--~~~--a~~fY~-k~GF~~~g~~ 406 (429)
T TIGR01890 339 LYPYAE--EDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVL--TTR--TGHWFR-ERGFQTASVD 406 (429)
T ss_pred EEecCC--CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEe--ecc--hHHHHH-HCCCEECChh
Confidence 865432 3457899999999999999999999999999999999987653 333 579999 9999999763
No 42
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.25 E-value=6.9e-11 Score=89.50 Aligned_cols=120 Identities=19% Similarity=0.298 Sum_probs=78.8
Q ss_pred CCCHHHHHHHHHHHHhhhhhhhcCCCCchhHhhHhhhccCCcceEEEEecCCCCcCcccccceEEeeeCCeEEEEEEEEe
Q 048770 61 KLSSAEKQYILNLLKANMEGPYGSEWPAEEKVKRREMVASEARYIFARELDAPSASASEMSKTNFAESKGSIVGFVHFRF 140 (243)
Q Consensus 61 ~l~~~~~~~i~~L~~~nm~~~y~~~w~~~~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~~~ 140 (243)
.++++|.+.+.+|+...........| ..........+. .+++++++|++||++.+..
T Consensus 4 ~~~~~d~~~i~~l~~~~F~~~~~~~~---~~~~~~~~~~~~--------------------~~~~~~~~~~ivg~~~~~~ 60 (127)
T PF13527_consen 4 PLTESDFEQIIELFNEAFGDSESPPE---IWEYFRNLYGPG--------------------RCVVAEDDGKIVGHVGLIP 60 (127)
T ss_dssp EE-GGGHHHHHHHHHHHTTT-CHHHH---HHHHHHHHHHTT--------------------EEEEEEETTEEEEEEEEEE
T ss_pred ECCHHHHHHHHHHHHHHCCCCCCchh---hhhhhhcccCcC--------------------cEEEEEECCEEEEEEEEEE
Confidence 45688999999988765532221110 001111122222 2344445799999987743
Q ss_pred e---ec-CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEe
Q 048770 141 C---LE-EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVS 209 (243)
Q Consensus 141 ~---~~-~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~ 209 (243)
. .. ...++.++..+.|+|+|||+|+|+.||+.+++.+++.|+..+.+.. . +..||+ ++||+..
T Consensus 61 ~~~~~~g~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~--~---~~~~Y~-~~G~~~~ 127 (127)
T PF13527_consen 61 RRLSVGGKKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFLFP--S---SPPFYR-RFGFEYA 127 (127)
T ss_dssp EEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE---S---SHHHHH-HTTEEEE
T ss_pred EEEEECCEEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec--C---Chhhhh-cCCCEEC
Confidence 2 11 2235789999999999999999999999999999999998777765 2 259999 9999863
No 43
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.23 E-value=2e-10 Score=109.47 Aligned_cols=81 Identities=22% Similarity=0.258 Sum_probs=67.5
Q ss_pred EEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhC
Q 048770 124 NFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSK 203 (243)
Q Consensus 124 ~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~k 203 (243)
++++.+|++|||+.+.... ...++|..|+|+|+|||+|||+.||+.++.++++.|+..+.+.+ .+..||+ |
T Consensus 506 ~Va~~~g~IVG~~~l~~~~---~~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~-----~a~~FYe-k 576 (614)
T PRK12308 506 AVAEHHGEVTGCASLYIYD---SGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLT-----RVPEFFM-K 576 (614)
T ss_pred EEEEECCEEEEEEEEEEcC---CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEee-----CcHHHHH-H
Confidence 4444579999999876432 23568999999999999999999999999999999999998865 2469999 9
Q ss_pred CCcEEeccCC
Q 048770 204 LRYVVSSISP 213 (243)
Q Consensus 204 lGF~~~~~~p 213 (243)
+||+..+...
T Consensus 577 ~GF~~~~~~~ 586 (614)
T PRK12308 577 QGFSPTSKSL 586 (614)
T ss_pred CCCEECCccc
Confidence 9999988655
No 44
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.22 E-value=8.4e-11 Score=102.12 Aligned_cols=79 Identities=14% Similarity=0.137 Sum_probs=66.5
Q ss_pred eEEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHh
Q 048770 123 TNFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLS 202 (243)
Q Consensus 123 ~~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~ 202 (243)
.++..++|++||++.+.. .+|..++|+|+|||+|+|+.||+.++..+++.|+..+.|.+...| ..||+
T Consensus 8 ~~v~~~~~~iVG~~~l~~--------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~---~~fYe- 75 (297)
T cd02169 8 VGIFDDAGELIATGSIAG--------NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKN---AKFFR- 75 (297)
T ss_pred EEEEEECCEEEEEEEecc--------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccH---HHHHH-
Confidence 334445799999988742 148899999999999999999999999999999999999987654 59999
Q ss_pred CCCcEEec-cCC
Q 048770 203 KLRYVVSS-ISP 213 (243)
Q Consensus 203 klGF~~~~-~~p 213 (243)
++||+..+ .++
T Consensus 76 k~GF~~~~~~~~ 87 (297)
T cd02169 76 GLGFKELANASD 87 (297)
T ss_pred HCCCEEecccCC
Confidence 99999988 444
No 45
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.22 E-value=3.2e-10 Score=87.04 Aligned_cols=76 Identities=20% Similarity=0.232 Sum_probs=62.4
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHH-HcCCCEEEEEEecCCHhHHHHHHhCCCcE
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIAR-KNRMGAVVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~-~~~~~~i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
++++||++.+..... ....+.+ .+.|.|++||+|+|+.++..+..++. ..++..|.+.|.+.|.+|+++++ |+||+
T Consensus 66 ~~~~iG~i~~~~~~~-~~~~~ei-g~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~-k~GF~ 142 (142)
T PF13302_consen 66 DGEIIGFIGLYNIDK-NNNWAEI-GYWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLE-KLGFE 142 (142)
T ss_dssp TTEEEEEEEEEEEET-TTTEEEE-EEEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHH-HTT-E
T ss_pred CCceEEEeeeeeccc-CCCcccc-ccchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHH-HcCCC
Confidence 468999999843322 3344555 48899999999999999999999996 56999999999999999999999 99996
No 46
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.21 E-value=2.9e-10 Score=85.67 Aligned_cols=132 Identities=19% Similarity=0.208 Sum_probs=94.8
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHhhhhhhhcCCCCchhHhhH-hhhccCCcceEEE-EecCCCCcCcccccceEEeeeC
Q 048770 52 VHLESGCGDKLSSAEKQYILNLLKANMEGPYGSEWPAEEKVKR-REMVASEARYIFA-RELDAPSASASEMSKTNFAESK 129 (243)
Q Consensus 52 ~~l~~~~~~~l~~~~~~~i~~L~~~nm~~~y~~~w~~~~~~k~-~el~~~~~~~~~~-~~~~~~~~~~~~~~~~~va~~~ 129 (243)
+.|+.-..++.+.--++-+-.|+..-.- ..+.-.++ ..|.....||.++ ..+.. .
T Consensus 7 ~~lR~L~~~D~~kGf~elL~qLT~vG~v-------t~e~F~krf~~mk~~~~~Y~i~Vied~~----------------s 63 (150)
T KOG3396|consen 7 FKLRPLEEDDYGKGFIELLKQLTSVGVV-------TREQFEKRFEAMKKSGDWYYIVVIEDKE----------------S 63 (150)
T ss_pred eEEeecccccccchHHHHHHHHhhcccc-------CHHHHHHHHHHHHhcCCcEEEEEEEeCC----------------c
Confidence 5777666677766666666666654221 01111122 3455555545444 44332 4
Q ss_pred CeEEEEEEEEeeec---CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCc
Q 048770 130 GSIVGFVHFRFCLE---EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRY 206 (243)
Q Consensus 130 g~ivG~~~~~~~~~---~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF 206 (243)
+++||.+.+..... .....+.|.++.|++++||++||+.|+..+..+++..|+=++.|.|.+.|. .||+ |+||
T Consensus 64 ~~vigtatL~IE~KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv---~FYe-KcG~ 139 (150)
T KOG3396|consen 64 EKVIGTATLFIERKFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNV---KFYE-KCGY 139 (150)
T ss_pred CeEEEEEEEEEehhhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhh---hHHH-HcCc
Confidence 89999998754432 334456799999999999999999999999999999999999999999887 9999 9999
Q ss_pred EEec
Q 048770 207 VVSS 210 (243)
Q Consensus 207 ~~~~ 210 (243)
...+
T Consensus 140 s~~~ 143 (150)
T KOG3396|consen 140 SNAG 143 (150)
T ss_pred cccc
Confidence 8766
No 47
>PRK13688 hypothetical protein; Provisional
Probab=99.19 E-value=1.9e-10 Score=90.99 Aligned_cols=83 Identities=17% Similarity=0.224 Sum_probs=60.0
Q ss_pred ceEEeeeCCeEEEEEEEEeee-------cCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCH
Q 048770 122 KTNFAESKGSIVGFVHFRFCL-------EEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANL 194 (243)
Q Consensus 122 ~~~va~~~g~ivG~~~~~~~~-------~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~ 194 (243)
..+++.+++++||++.+.... ......++|..|+|+|+|||+|+|+.||+.+. +.++. +.+...|
T Consensus 46 ~~~~~~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a~----~~~~~---~~~~~~~- 117 (156)
T PRK13688 46 PFYGIYYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFAK----SFQLP---IKTIARN- 117 (156)
T ss_pred CEEEEEECCEEEEEEEEEecCCcccccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHH----HhCCe---EEEEecc-
Confidence 334455579999988764321 12245678999999999999999999998643 34443 3444556
Q ss_pred hHHHHHHhCCCcEEeccCC
Q 048770 195 LAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 195 ~A~~fY~~klGF~~~~~~p 213 (243)
.|.+||+ ++||+..+..+
T Consensus 118 ~a~~FY~-k~GF~~~~~~~ 135 (156)
T PRK13688 118 KSKDFWL-KLGFTPVEYKN 135 (156)
T ss_pred chHHHHH-hCCCEEeEEec
Confidence 4789999 99999998763
No 48
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.18 E-value=4.1e-10 Score=80.18 Aligned_cols=60 Identities=17% Similarity=0.121 Sum_probs=51.3
Q ss_pred EEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEec
Q 048770 149 LYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSS 210 (243)
Q Consensus 149 ~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~ 210 (243)
..|..+++.|++||+|+|+.++..+...+.+.|.. .++.+..+|.+|++||+ ++||+...
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~-~~l~v~~~N~~s~~ly~-klGf~~~~ 81 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLERGKT-PFLYVDADNEASIRLYE-KLGFREIE 81 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSE-EEEEEETT-HHHHHHHH-HCT-EEEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHH-HcCCEEEE
Confidence 35899999999999999999999998888887764 68899999999999999 99999875
No 49
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.13 E-value=3.6e-10 Score=87.69 Aligned_cols=77 Identities=14% Similarity=0.238 Sum_probs=66.2
Q ss_pred eCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcE
Q 048770 128 SKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 128 ~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
.+|.+||++.+.... ....+.+..|+|+|++||+|+|..|++.++..|++.|++.+.+-+. .+..||+ ++||.
T Consensus 47 ~~g~viGC~aL~~~~--~~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt----~~~~~F~-~~GF~ 119 (153)
T COG1246 47 RDGKVIGCAALHPVL--EEDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTT----RSPEFFA-ERGFT 119 (153)
T ss_pred eCCcEEEEEeecccC--ccCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec----ccHHHHH-HcCCe
Confidence 369999999986322 2346789999999999999999999999999999999999998664 3568999 99999
Q ss_pred Eecc
Q 048770 208 VSSI 211 (243)
Q Consensus 208 ~~~~ 211 (243)
....
T Consensus 120 ~vd~ 123 (153)
T COG1246 120 RVDK 123 (153)
T ss_pred ECcc
Confidence 9886
No 50
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=99.12 E-value=9.3e-10 Score=86.47 Aligned_cols=81 Identities=21% Similarity=0.270 Sum_probs=69.6
Q ss_pred CCeEEEEEEEEeeecC-----CcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhC
Q 048770 129 KGSIVGFVHFRFCLEE-----DVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSK 203 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~-----~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~k 203 (243)
++++||++.+|....+ +.+. .-.|.|+.||+|+|+.++..++..|+..|++.|.++|.++|.++.+.-+ +
T Consensus 77 d~~ivG~i~lRh~Ln~~ll~~gGHI----GY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI~-~ 151 (174)
T COG3981 77 DGQIVGFINLRHQLNDFLLEEGGHI----GYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVIE-A 151 (174)
T ss_pred CCcEEEEEEeeeecchHHHhcCCcc----cceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHHH-h
Confidence 5999999999877652 3333 3358999999999999999999999999999999999999999999999 9
Q ss_pred CCcEEeccCCC
Q 048770 204 LRYVVSSISPS 214 (243)
Q Consensus 204 lGF~~~~~~p~ 214 (243)
+|=....+...
T Consensus 152 NGGile~~~~~ 162 (174)
T COG3981 152 NGGILENEFFG 162 (174)
T ss_pred cCCEEeEEEcc
Confidence 99887765443
No 51
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=99.08 E-value=1.8e-09 Score=86.17 Aligned_cols=84 Identities=15% Similarity=0.170 Sum_probs=69.9
Q ss_pred CeEEEEEEEEeeec-CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHc-CCCEEEEEEecCCHhHHHHHHhCCCcE
Q 048770 130 GSIVGFVHFRFCLE-EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKN-RMGAVVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 130 g~ivG~~~~~~~~~-~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~-~~~~i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
+++||.+.+..... ..... ......+.|.++|+|+|+.++..+.++++.. ++++|.+.|.+.|.+|+++++ |+||+
T Consensus 77 ~~~iG~~~~~~~~~~~~~~~-~~ig~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~e-k~Gf~ 154 (187)
T COG1670 77 GELIGVIGLSDIDRAANGDL-AEIGYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYE-KLGFR 154 (187)
T ss_pred CeEEEEEEEEEeccccccce-EEEEEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHH-HcCCh
Confidence 58999999875442 11222 2335556999999999999999999999985 999999999999999999999 99999
Q ss_pred EeccCCCC
Q 048770 208 VSSISPSR 215 (243)
Q Consensus 208 ~~~~~p~~ 215 (243)
..+.....
T Consensus 155 ~eg~~~~~ 162 (187)
T COG1670 155 LEGELRQH 162 (187)
T ss_pred hhhhhhhc
Confidence 99987764
No 52
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=99.07 E-value=1.6e-09 Score=95.63 Aligned_cols=77 Identities=12% Similarity=0.109 Sum_probs=66.0
Q ss_pred eeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCC
Q 048770 126 AESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLR 205 (243)
Q Consensus 126 a~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klG 205 (243)
++.+|++||++.+.- . .|..++|+|+|||+|+|+.||..++..+++.|+..+.+.+.+.| .+||+ ++|
T Consensus 36 ~~~~~~lVg~g~l~g------~--~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~---~~fy~-klG 103 (332)
T TIGR00124 36 VYEDEEIIGCGGIAG------N--VIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEY---AALFE-YCG 103 (332)
T ss_pred EEECCEEEEEEEEec------C--EEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchH---HHHHH-HcC
Confidence 334799999998731 1 48899999999999999999999999999999999999997765 47999 999
Q ss_pred cEEeccCCC
Q 048770 206 YVVSSISPS 214 (243)
Q Consensus 206 F~~~~~~p~ 214 (243)
|...+..+.
T Consensus 104 F~~i~~~~~ 112 (332)
T TIGR00124 104 FKTLAEAKD 112 (332)
T ss_pred CEEeeeecc
Confidence 999986663
No 53
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=99.04 E-value=6.1e-10 Score=85.98 Aligned_cols=105 Identities=21% Similarity=0.214 Sum_probs=85.4
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEE
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVV 208 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~ 208 (243)
+|++.|++.-...........++..+.|.|+||+.|+|+.||..+++.....+.--+.|-|...|+-|+.||+ ++||.+
T Consensus 50 ~~~imgyimgk~Eg~~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYk-kLGY~~ 128 (173)
T KOG3234|consen 50 TGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYK-KLGYSV 128 (173)
T ss_pred CCceEEEEeeeccccCcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHH-hcCceE
Confidence 4889999887655555666788999999999999999999999999999888888999999999999999999 999999
Q ss_pred eccCCCCCCCCCCCcceEEEEeeecCcc
Q 048770 209 SSISPSRVDPFTGVEKSYEILCKVFDNE 236 (243)
Q Consensus 209 ~~~~p~~~~~~~g~~~~y~il~k~l~~~ 236 (243)
-.+.+..+-. |.+.+--=|.|+++++
T Consensus 129 YR~Vi~YY~~--g~deda~dMRKalSrD 154 (173)
T KOG3234|consen 129 YRTVIEYYSV--GPDEDAYDMRKALSRD 154 (173)
T ss_pred EEeeeeeecc--CCCcchHhhhhhhccC
Confidence 8887775431 2233333366777655
No 54
>PRK01346 hypothetical protein; Provisional
Probab=99.03 E-value=7.1e-09 Score=94.25 Aligned_cols=83 Identities=18% Similarity=0.066 Sum_probs=66.8
Q ss_pred eEEeeeCCeEEEEEEEEeee-----cCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHH
Q 048770 123 TNFAESKGSIVGFVHFRFCL-----EEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAM 197 (243)
Q Consensus 123 ~~va~~~g~ivG~~~~~~~~-----~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~ 197 (243)
.++++++|++||++.+.... ....+..+|..++|+|+|||+|+|+.||+.++..+++.|+..+.|.+.. .
T Consensus 49 ~~va~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~~-----~ 123 (411)
T PRK01346 49 TLGAFDGDEVVGTAGAFDLRLTVPGGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTASE-----G 123 (411)
T ss_pred eEEEEECCEEEEEEEEeccccccCCCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECCc-----h
Confidence 34555679999999865322 1123678999999999999999999999999999999999888887543 3
Q ss_pred HHHHhCCCcEEecc
Q 048770 198 NFYLSKLRYVVSSI 211 (243)
Q Consensus 198 ~fY~~klGF~~~~~ 211 (243)
.||+ ++||.....
T Consensus 124 ~~Y~-r~Gf~~~~~ 136 (411)
T PRK01346 124 GIYG-RFGYGPATY 136 (411)
T ss_pred hhHh-hCCCeeccc
Confidence 7999 999987764
No 55
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.01 E-value=7.7e-09 Score=82.43 Aligned_cols=143 Identities=17% Similarity=0.205 Sum_probs=96.9
Q ss_pred CCHHHHHHHHHHHHhhhhhhhcCCCCchhHhhHhhhccCCcceEEEEecCCCCcCcccccceEEeeeCCeEEEEEEEEee
Q 048770 62 LSSAEKQYILNLLKANMEGPYGSEWPAEEKVKRREMVASEARYIFARELDAPSASASEMSKTNFAESKGSIVGFVHFRFC 141 (243)
Q Consensus 62 l~~~~~~~i~~L~~~nm~~~y~~~w~~~~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~~~~ 141 (243)
.++.|...|.+++++.+. ++.+......+.... +| .....+|+.++|++||.+.|...
T Consensus 9 e~~~d~~~i~~~~~~aF~-------~~~e~~~v~~lR~~~-~~--------------~~~LslVA~d~g~vvG~Il~s~v 66 (171)
T COG3153 9 ETPADIPAIEALTREAFG-------PGREAKLVDKLREGG-RP--------------DLTLSLVAEDDGEVVGHILFSPV 66 (171)
T ss_pred cChhhHHHHHHHHHHHhh-------cchHHHHHHHHHhcC-Cc--------------ccceeEEEeeCCEEEEEEEEeEE
Confidence 457788888888876664 222222222332221 01 12345777788999999988654
Q ss_pred ecC--CcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEeccCCCCCCCC
Q 048770 142 LEE--DVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSISPSRVDPF 219 (243)
Q Consensus 142 ~~~--~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~~~~~~ 219 (243)
.-. ....+-+.-+.|+|++||+|||+.||+..++.++..|...|.+.=.+ .||. ++||+......-....
T Consensus 67 ~~~g~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlGdp------~YY~-rfGF~~~~~~~l~~p~- 138 (171)
T COG3153 67 TVGGEELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAGASAVVVLGDP------TYYS-RFGFEPAAGAKLYAPG- 138 (171)
T ss_pred EecCcccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecCc------cccc-ccCcEEccccccccCC-
Confidence 333 45667788999999999999999999999999999999988875444 7998 9999998764433211
Q ss_pred CCCcceEEEEeeecCcc
Q 048770 220 TGVEKSYEILCKVFDNE 236 (243)
Q Consensus 220 ~g~~~~y~il~k~l~~~ 236 (243)
. ..+-..|.+.|...
T Consensus 139 ~--~~~~~fl~~~L~~~ 153 (171)
T COG3153 139 P--VPDERFLALELGDG 153 (171)
T ss_pred C--CCCceEEEEEccCC
Confidence 1 11234555666543
No 56
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=98.99 E-value=3.2e-09 Score=83.31 Aligned_cols=77 Identities=22% Similarity=0.377 Sum_probs=65.9
Q ss_pred eCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcE
Q 048770 128 SKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 128 ~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
...++||...+.... .....+++..+.|+...||+|.|++||+.++.+++..|.+.++|++.... +||+ ++||+
T Consensus 64 ~~~~VigH~rLS~i~-n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~DQ~----~FYe-~lGYe 137 (225)
T KOG3397|consen 64 ENDEVLGHSRLSHLP-NRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTDDQC----RFYE-SLGYE 137 (225)
T ss_pred cccceeeeeccccCC-CCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecccch----hhhh-hhccc
Confidence 357888888775443 34467899999999999999999999999999999999999999987743 7999 99999
Q ss_pred Eec
Q 048770 208 VSS 210 (243)
Q Consensus 208 ~~~ 210 (243)
...
T Consensus 138 ~c~ 140 (225)
T KOG3397|consen 138 KCD 140 (225)
T ss_pred ccC
Confidence 765
No 57
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.97 E-value=3.6e-09 Score=98.32 Aligned_cols=85 Identities=22% Similarity=0.339 Sum_probs=69.0
Q ss_pred ceEEeee---CCeEEEEEEEEeeecC-----CcCEEEEEEEEEc-----------ccccCCCHHHHHHHHHHHHHHHcCC
Q 048770 122 KTNFAES---KGSIVGFVHFRFCLEE-----DVPVLYVYELQLE-----------SRVQGKGLGKFLMQLIELIARKNRM 182 (243)
Q Consensus 122 ~~~va~~---~g~ivG~~~~~~~~~~-----~~~~~~i~~l~V~-----------~~~rg~GlG~~L~~~l~~~a~~~~~ 182 (243)
..|..+. ++.+|||+.++...+. .....+|.+|.|- ++|||+|+|+.||+.++.+|++.|+
T Consensus 412 e~F~~y~~~~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G~ 491 (522)
T TIGR01211 412 EFFLSYEDPKNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEGS 491 (522)
T ss_pred eEEEEEEcCCCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCCC
Confidence 3455554 5799999999866531 1235677787754 8999999999999999999999999
Q ss_pred CEEEEEEecCCHhHHHHHHhCCCcEEec
Q 048770 183 GAVVLTVQKANLLAMNFYLSKLRYVVSS 210 (243)
Q Consensus 183 ~~i~l~v~~~N~~A~~fY~~klGF~~~~ 210 (243)
..|.+.+ |..|++||+ ++||...+
T Consensus 492 ~~i~v~s---~~~A~~FY~-klGf~~~g 515 (522)
T TIGR01211 492 EKILVIS---GIGVREYYR-KLGYELDG 515 (522)
T ss_pred CEEEEee---CchHHHHHH-HCCCEEEc
Confidence 9998743 779999999 99999876
No 58
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=98.94 E-value=2.1e-09 Score=86.60 Aligned_cols=69 Identities=25% Similarity=0.387 Sum_probs=65.1
Q ss_pred EEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcC-CCEEEEEEecCCHhHHHHHHhCCCcEEeccCCCCCC
Q 048770 148 VLYVYELQLESRVQGKGLGKFLMQLIELIARKNR-MGAVVLTVQKANLLAMNFYLSKLRYVVSSISPSRVD 217 (243)
Q Consensus 148 ~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~-~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~~~~ 217 (243)
++||..+.|.|.||.+|||+.|+..+.+.+...+ ++.++|.|...|..|+.||+ +.||+.+...+..+.
T Consensus 89 ~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~-~~gF~~~~~~~~~y~ 158 (187)
T KOG3138|consen 89 VIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYE-KRGFEIVERLKNYYS 158 (187)
T ss_pred eeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHH-hcCceEeeccccccc
Confidence 6899999999999999999999999999998887 88999999999999999999 999999999888654
No 59
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.88 E-value=2.4e-08 Score=76.39 Aligned_cols=78 Identities=21% Similarity=0.251 Sum_probs=64.6
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHc-CCCEEEEEEecCCHhHHHHHHhCCCcE
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKN-RMGAVVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~-~~~~i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
+|++++++.+.+....... .-|..+.|.|++||+|+|+.||..++..+.+. .-..+.|+.+. -...||. ++||.
T Consensus 58 ~g~LvAyaRLl~~~~~~~~-~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQa---hLq~fYa-~~GFv 132 (155)
T COG2153 58 DGELVAYARLLPPGAEYEE-VSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQA---HLQDFYA-SFGFV 132 (155)
T ss_pred CCeEEEEEecCCCCCCcCc-eeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHH---HHHHHHH-HhCcE
Confidence 6999999998655444333 67999999999999999999998888888776 56678887776 4779999 99999
Q ss_pred Eecc
Q 048770 208 VSSI 211 (243)
Q Consensus 208 ~~~~ 211 (243)
.++.
T Consensus 133 ~~~e 136 (155)
T COG2153 133 RVGE 136 (155)
T ss_pred EcCc
Confidence 9874
No 60
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.88 E-value=1.8e-08 Score=65.31 Aligned_cols=62 Identities=29% Similarity=0.384 Sum_probs=52.5
Q ss_pred EeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEE
Q 048770 125 FAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVL 187 (243)
Q Consensus 125 va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l 187 (243)
++..+++++|++.+..... ....+++..+.|+|++||+|+|+.++..+.+++.+.+++.+.+
T Consensus 3 ~~~~~~~~ig~~~~~~~~~-~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 3 VAEDDGEIVGFASLSPDGS-GGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred EEecCCEEEEEEEEEecCC-CCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 4445789999999875543 3456889999999999999999999999999999999998876
No 61
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=98.82 E-value=3.3e-08 Score=82.94 Aligned_cols=85 Identities=19% Similarity=0.213 Sum_probs=68.4
Q ss_pred ceEEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHH
Q 048770 122 KTNFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYL 201 (243)
Q Consensus 122 ~~~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~ 201 (243)
..+..+.+|+||..+... .....+..|..++++|+|||+|+|+.|+..+..-.-..|. ..+|.+...|+.|.+.|+
T Consensus 178 ~~~f~~~d~~iVa~A~t~---a~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk-~~~L~~~~~N~~A~~iY~ 253 (268)
T COG3393 178 RTYFLEGDGKIVAKAETA---AENPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGK-IPCLFVNSDNPVARRIYQ 253 (268)
T ss_pred eEEEEccCCcEEEeeecc---ccCCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCC-eeEEEEecCCHHHHHHHH
Confidence 335555567999998854 3344567799999999999999999999887766656664 567888899999999999
Q ss_pred hCCCcEEecc
Q 048770 202 SKLRYVVSSI 211 (243)
Q Consensus 202 ~klGF~~~~~ 211 (243)
++||+..+.
T Consensus 254 -riGF~~~g~ 262 (268)
T COG3393 254 -RIGFREIGE 262 (268)
T ss_pred -HhCCeecce
Confidence 999999874
No 62
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.59 E-value=9.4e-07 Score=61.64 Aligned_cols=67 Identities=18% Similarity=0.296 Sum_probs=51.7
Q ss_pred eeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHH
Q 048770 126 AESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYL 201 (243)
Q Consensus 126 a~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~ 201 (243)
+..+|+.+|++.|.. ...++.+....|.|++||+|+|+.|++.+.++|+++|.+ |.+...=+.++++
T Consensus 4 ~~~~g~~~a~l~Y~~----~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~k-----v~p~C~y~~~~~~ 70 (78)
T PF14542_consen 4 LKDDGEEIAELTYRE----DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLK-----VVPTCSYVAKYFR 70 (78)
T ss_dssp EESSTTEEEEEEEEE----SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-E-----EEETSHHHHHHHH
T ss_pred EEECCEEEEEEEEEe----CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCE-----EEEECHHHHHHHH
Confidence 444688999999954 346889999999999999999999999999999999853 3344444556655
No 63
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.46 E-value=6.8e-06 Score=67.02 Aligned_cols=83 Identities=17% Similarity=0.216 Sum_probs=51.7
Q ss_pred CEEEEEEEEEcccccCCCHHHHHHHHHHHHHH-------------------------HcCCCEEEEEEecCCHhHHHHHH
Q 048770 147 PVLYVYELQLESRVQGKGLGKFLMQLIELIAR-------------------------KNRMGAVVLTVQKANLLAMNFYL 201 (243)
Q Consensus 147 ~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~-------------------------~~~~~~i~l~v~~~N~~A~~fY~ 201 (243)
..+-|..|+|+|++|++|+|+.+++.+++++. ..+++.+-.. +-.+..-.+|+.
T Consensus 89 ~g~RIvRIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtS-FG~t~~Ll~FW~ 167 (196)
T PF13718_consen 89 SGARIVRIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTS-FGATPELLKFWQ 167 (196)
T ss_dssp EEEEEEEEEE-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEE-EE--HHHHHHHH
T ss_pred cceeEEEEEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEec-cCCCHHHHHHHH
Confidence 45679999999999999999999999999993 5567655443 344677899999
Q ss_pred hCCCcEEeccCCCCCCCCCCCcceEEEEeeecC
Q 048770 202 SKLRYVVSSISPSRVDPFTGVEKSYEILCKVFD 234 (243)
Q Consensus 202 ~klGF~~~~~~p~~~~~~~g~~~~y~il~k~l~ 234 (243)
|+||..+...+.... ..|+ .=.||-++++
T Consensus 168 -k~gf~pv~l~~~~n~-~SGe--~S~imlr~ls 196 (196)
T PF13718_consen 168 -KNGFVPVYLGQTRNE-ASGE--HSAIMLRPLS 196 (196)
T ss_dssp -CTT-EEEEE-SS--T-TT-----EEEEEEE--
T ss_pred -HCCcEEEEEecCccc-ccCc--eeeeEEeecC
Confidence 999999887666422 3343 3357777763
No 64
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=98.38 E-value=2.6e-06 Score=65.42 Aligned_cols=80 Identities=19% Similarity=0.220 Sum_probs=64.1
Q ss_pred eEEEEEEEEeeec-------CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHc-CCCEEEEEEecCCHhHHHHHHh
Q 048770 131 SIVGFVHFRFCLE-------EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKN-RMGAVVLTVQKANLLAMNFYLS 202 (243)
Q Consensus 131 ~ivG~~~~~~~~~-------~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~-~~~~i~l~v~~~N~~A~~fY~~ 202 (243)
..||-+.+....+ +...++.+.-+.-.|..||+|+|+..+.+++.++... ++.+..+.+...|.++++||.
T Consensus 83 ~MvGDvNlFlt~~~~~~n~s~~~~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFk- 161 (185)
T KOG4135|consen 83 HMVGDVNLFLTTSPDTENPSDDVITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFK- 161 (185)
T ss_pred hhccceeeEEecCCCcCCcccceeeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHH-
Confidence 4666555433322 2244555666677999999999999999999999876 899999999999999999999
Q ss_pred CCCcEEecc
Q 048770 203 KLRYVVSSI 211 (243)
Q Consensus 203 klGF~~~~~ 211 (243)
|++|..+..
T Consensus 162 k~~f~q~~~ 170 (185)
T KOG4135|consen 162 KFLFTQVFY 170 (185)
T ss_pred Hhhheeeee
Confidence 999998875
No 65
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=98.35 E-value=4e-06 Score=71.65 Aligned_cols=83 Identities=18% Similarity=0.145 Sum_probs=61.3
Q ss_pred cceEEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHH
Q 048770 121 SKTNFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFY 200 (243)
Q Consensus 121 ~~~~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY 200 (243)
+..+++..+|++|+-+.-.+..+.. .-.+|.++|+|||+|||+.+...++..|.++|+.-.+ .+ .|.+++++=
T Consensus 165 G~Gf~i~~~~~iVs~~~s~~~~~~~----~EI~I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~W-Dc--~N~~S~~lA 237 (265)
T PF12746_consen 165 GFGFCILHDGEIVSGCSSYFVYENG----IEIDIETHPEYRGKGLATAVAAAFILECLENGLYPSW-DC--HNLASIALA 237 (265)
T ss_dssp --EEEEEETTEEEEEEEEEEEETTE----EEEEEEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE--EE--SSHHHHHHH
T ss_pred CcEEEEEECCEEEEEEEEEEEECCE----EEEEEEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCe-eC--CCHHHHHHH
Confidence 4567777789999876655555433 2357889999999999999999999999999976543 34 699999999
Q ss_pred HhCCCcEEecc
Q 048770 201 LSKLRYVVSSI 211 (243)
Q Consensus 201 ~~klGF~~~~~ 211 (243)
+ |+||+....
T Consensus 238 ~-kLGf~~~~~ 247 (265)
T PF12746_consen 238 E-KLGFHFDFE 247 (265)
T ss_dssp H-HCT--EEEE
T ss_pred H-HcCCcccce
Confidence 9 999998874
No 66
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=98.28 E-value=2.8e-06 Score=63.94 Aligned_cols=67 Identities=18% Similarity=0.159 Sum_probs=60.8
Q ss_pred CcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecC--CHhHHHHHHhCCCcEEeccC
Q 048770 145 DVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKA--NLLAMNFYLSKLRYVVSSIS 212 (243)
Q Consensus 145 ~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~--N~~A~~fY~~klGF~~~~~~ 212 (243)
..+.+|+..+.|....||+|+|+.|.+-+.+.|...|...+.++|..+ |+++..|.- .+||..+|..
T Consensus 81 Ye~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHa-alGF~eVG~a 149 (167)
T COG3818 81 YENFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHA-ALGFHEVGQA 149 (167)
T ss_pred CCceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhh-hcCceEccce
Confidence 456789999999999999999999999999999999999999888755 999999999 9999999853
No 67
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=98.15 E-value=7.2e-06 Score=78.65 Aligned_cols=89 Identities=20% Similarity=0.294 Sum_probs=70.0
Q ss_pred EEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEeccCCCCCCCCCCCcceEE
Q 048770 148 VLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSISPSRVDPFTGVEKSYE 227 (243)
Q Consensus 148 ~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~~~~~~~g~~~~y~ 227 (243)
.+-|..|+|+|++|++|||++|++.+...|+ .+++-+-.. +-.++.-.+|+. ++||.++..+|.... ..|. .=.
T Consensus 531 G~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~Dwlgvs-FG~t~~L~rFW~-rnGF~pVhls~~rn~-~SGe--ys~ 604 (758)
T COG1444 531 GWRIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVS-FGYTEELLRFWL-RNGFVPVHLSPTRNA-SSGE--YTA 604 (758)
T ss_pred eeeEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeec-cCCCHHHHHHHH-HcCeEEEEecCccCc-CCCc--eeE
Confidence 3458999999999999999999999999986 566644443 344778899999 999999999988643 2232 235
Q ss_pred EEeeecCccchhccc
Q 048770 228 ILCKVFDNESKALLQ 242 (243)
Q Consensus 228 il~k~l~~~~~~~~~ 242 (243)
||-|+|+..+++.++
T Consensus 605 i~lkpLs~~~~~~~~ 619 (758)
T COG1444 605 IVLKPLSDAGKELVE 619 (758)
T ss_pred EEEecCCHHHHHHHH
Confidence 788999998887765
No 68
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=98.05 E-value=1.8e-05 Score=56.13 Aligned_cols=73 Identities=14% Similarity=0.074 Sum_probs=62.5
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEE
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVV 208 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~ 208 (243)
+|.+|-.+... ..+.+..-+..|+|||+|+.+.++..+.....+.|+. ++..|.+.|..++++.. ++||..
T Consensus 7 eG~PVSW~lmd-------qtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P-~Y~hv~~~N~~~~r~~~-~lg~~~ 77 (89)
T PF08444_consen 7 EGNPVSWSLMD-------QTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFP-FYGHVDEDNEASQRLSK-SLGFIF 77 (89)
T ss_pred CCCEeEEEEec-------ccccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCC-eEeehHhccHHHHHHHH-HCCCee
Confidence 58888877642 1234667788999999999999999999999999986 89999999999999999 999998
Q ss_pred ec
Q 048770 209 SS 210 (243)
Q Consensus 209 ~~ 210 (243)
..
T Consensus 78 ~p 79 (89)
T PF08444_consen 78 MP 79 (89)
T ss_pred cC
Confidence 65
No 69
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=98.05 E-value=2.1e-05 Score=57.15 Aligned_cols=62 Identities=11% Similarity=0.209 Sum_probs=51.2
Q ss_pred cceEEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEE
Q 048770 121 SKTNFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAV 185 (243)
Q Consensus 121 ~~~~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i 185 (243)
+..+++..+|..+|++.+... +...+.|..-+|.+++||||+|+.|++.+.+.|++.|.+-+
T Consensus 15 ~~~y~~~~~G~~~~e~~y~~~---~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~kii 76 (99)
T COG2388 15 NGRYVLTDEGEVIGEATYYDR---GENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKII 76 (99)
T ss_pred ceEEEEecCCcEEEEEEEecC---CCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeEc
Confidence 455666668999999887543 34578899999999999999999999999999999987433
No 70
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=97.97 E-value=0.00026 Score=53.45 Aligned_cols=82 Identities=13% Similarity=0.147 Sum_probs=54.1
Q ss_pred ceEEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEe---cCCHhHH-
Q 048770 122 KTNFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQ---KANLLAM- 197 (243)
Q Consensus 122 ~~~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~---~~N~~A~- 197 (243)
..|++.-|++++|-+.+.... ....+..|.|++--||+|+|..|++.+...+ .+++...+... +.+.+++
T Consensus 39 ~l~aArFNdRlLgAv~v~~~~----~~~~L~~l~VRevTRrRGVG~yLlee~~rq~--p~i~~w~l~~~~~~~~~~~~~~ 112 (128)
T PF12568_consen 39 RLFAARFNDRLLGAVKVTISG----QQAELSDLCVREVTRRRGVGLYLLEEVLRQL--PDIKHWWLADEGVEPQDRAVMA 112 (128)
T ss_dssp EEEEEEETTEEEEEEEEEEET----TEEEEEEEEE-TT-SSSSHHHHHHHHHHHHS---S--EEEE--TT-S--THHHHH
T ss_pred eEEEEEechheeeeEEEEEcC----cceEEeeEEEeeccccccHHHHHHHHHHHHC--CCCcEEEEecCCCcccchHHHH
Confidence 344455589999999886543 3578999999999999999999998887665 46666666543 2355555
Q ss_pred HHHHhCCCcEEec
Q 048770 198 NFYLSKLRYVVSS 210 (243)
Q Consensus 198 ~fY~~klGF~~~~ 210 (243)
.|.. .+||...+
T Consensus 113 ~Fm~-a~GF~~~~ 124 (128)
T PF12568_consen 113 AFMQ-ACGFSAQS 124 (128)
T ss_dssp HHHH-HHT-EE-S
T ss_pred HHHH-HcCccccC
Confidence 5777 99996543
No 71
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.76 E-value=4.2e-05 Score=54.14 Aligned_cols=44 Identities=32% Similarity=0.437 Sum_probs=40.9
Q ss_pred EEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCc
Q 048770 154 LQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRY 206 (243)
Q Consensus 154 l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF 206 (243)
++|+|++||+|+|+.|+..++..+...|+. .|..+..+|. ++||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~--------~~~~~~~~~~-~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS--------LNRLALEVYE-KNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce--------ehHHHHHHHH-hcCC
Confidence 999999999999999999999999997765 7888999999 9999
No 72
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=97.76 E-value=1.3e-05 Score=62.16 Aligned_cols=67 Identities=10% Similarity=0.194 Sum_probs=51.5
Q ss_pred CEEEEEEEEEcccccCCCHHHHHHHH-HHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEeccCCCCCC
Q 048770 147 PVLYVYELQLESRVQGKGLGKFLMQL-IELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSISPSRVD 217 (243)
Q Consensus 147 ~~~~i~~l~V~~~~rg~GlG~~L~~~-l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~~~~ 217 (243)
..+.|..+.|+|+||.+|+|+.|+.. +...+...-..++.|-+.. +.+.||+ ++||+.++.....++
T Consensus 100 ~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~---pLvPFYE-r~gFk~vgp~~~~~~ 167 (190)
T KOG4144|consen 100 HNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHD---PLVPFYE-RFGFKAVGPCAITVG 167 (190)
T ss_pred cceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecC---CccchhH-hcCceeecccccccc
Confidence 34889999999999999999999955 5555544444566676655 6789999 999999986554443
No 73
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=97.75 E-value=0.0035 Score=51.87 Aligned_cols=160 Identities=10% Similarity=0.070 Sum_probs=99.5
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHhhhhhhhcCCCCc--hhHhhHhhhccCCcceEEEEecCCCCcCcccccceEEeeeC
Q 048770 52 VHLESGCGDKLSSAEKQYILNLLKANMEGPYGSEWPA--EEKVKRREMVASEARYIFARELDAPSASASEMSKTNFAESK 129 (243)
Q Consensus 52 ~~l~~~~~~~l~~~~~~~i~~L~~~nm~~~y~~~w~~--~~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 129 (243)
+.+......++.+++++.++.|=.+-..+.. +|.. .+.....++-.+...|++.... +
T Consensus 3 ~~~v~~~~~~~~~~~l~~~~rLR~~VF~~el--gW~~~~~~g~E~D~yD~~~~~yll~~~~------------------~ 62 (207)
T PRK13834 3 ILAISPDQYEREASLLKQMHRLRARVFGGRL--GWDVSITDGEERDQFDDLKPTYILAISD------------------S 62 (207)
T ss_pred EEEEeCchhhcCHHHHHHHHHHHHHHhcccc--CCCCCCCCCcCccCCCCCCCEEEEEEeC------------------C
Confidence 3444455567778888888888653222211 4532 1112233444455666666543 5
Q ss_pred CeEEEEEEEEeeec------------------CCcCEEEEEEEEEcccccCC---C----HHHHHHHHHHHHHHHcCCCE
Q 048770 130 GSIVGFVHFRFCLE------------------EDVPVLYVYELQLESRVQGK---G----LGKFLMQLIELIARKNRMGA 184 (243)
Q Consensus 130 g~ivG~~~~~~~~~------------------~~~~~~~i~~l~V~~~~rg~---G----lG~~L~~~l~~~a~~~~~~~ 184 (243)
|++||++.+..... ....++.+..++|++++++. + +...|+..+.+++..+|++.
T Consensus 63 g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~ 142 (207)
T PRK13834 63 GRVAGCARLLPAIGPTMLAQVFPQLLPAGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGYTE 142 (207)
T ss_pred CeEEEEEecccCCCcchhhhhcHHhcCCCCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCCCE
Confidence 89999986643211 23568899999999986322 2 55678899999999999999
Q ss_pred EEEEEecCCHhHHHHHHhCCCcEEeccCCCCCCCCCCCcceEEEEeeecCccchh
Q 048770 185 VVLTVQKANLLAMNFYLSKLRYVVSSISPSRVDPFTGVEKSYEILCKVFDNESKA 239 (243)
Q Consensus 185 i~l~v~~~N~~A~~fY~~klGF~~~~~~p~~~~~~~g~~~~y~il~k~l~~~~~~ 239 (243)
++..+.+ .-.+.+. ++||......|... ..|. .+.-..-+++.++..
T Consensus 143 ~~~v~~~---~~~r~l~-r~G~~~~~lG~~~~--~g~~--~~~a~~i~v~~~~~~ 189 (207)
T PRK13834 143 IVTATDL---RFERILA-RAGWPMQRLGEPKA--IGNT--MAVAGILPADRDSFE 189 (207)
T ss_pred EEEEECH---HHHHHHH-HcCCCeEECCCCEE--ECCe--EEEEEEEECCHHHHH
Confidence 8887766 4557888 99998876555432 1111 333334455555443
No 74
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.64 E-value=0.00055 Score=58.57 Aligned_cols=74 Identities=9% Similarity=0.099 Sum_probs=63.8
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEE
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVV 208 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~ 208 (243)
++++|++.++.-+ -|..++|++.+||-|+.-.|+..+.+.+-+.|...+.+.+-+.+. .||. .+||..
T Consensus 45 ~~~iiacGsiaGn--------vikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~---~lFk-~~GF~~ 112 (352)
T COG3053 45 NEEIIACGSIAGN--------VIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEYA---ALFK-QCGFSE 112 (352)
T ss_pred CCcEEEecccccc--------eeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhHH---HHHH-hCCceE
Confidence 5899999876322 277899999999999999999999999999999999999988665 8999 999998
Q ss_pred eccCCC
Q 048770 209 SSISPS 214 (243)
Q Consensus 209 ~~~~p~ 214 (243)
....+.
T Consensus 113 i~~~~~ 118 (352)
T COG3053 113 IASAEN 118 (352)
T ss_pred eeccCc
Confidence 876554
No 75
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=97.59 E-value=0.00041 Score=51.56 Aligned_cols=74 Identities=18% Similarity=0.091 Sum_probs=53.1
Q ss_pred CCeEEEEEEEEeeec-CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcE
Q 048770 129 KGSIVGFVHFRFCLE-EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~-~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
+|.+|||+.+.-... ...-..-+.++++-..|||+|+|++..+.+-..+ .| .-.+-+...|.+|+.|+. +.-+.
T Consensus 45 ~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~--~g--~w~Va~i~EN~PA~~fwK-~~~~t 119 (143)
T COG5628 45 GGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSA--WG--VWQVATVRENTPARAFWK-RVAET 119 (143)
T ss_pred CCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHHHHHHHHh--hc--eEEEEEeccCChhHHHHH-hhhcc
Confidence 689999987642222 1122234788999999999999999998876544 23 345567788999999998 66544
No 76
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.58 E-value=0.0047 Score=46.71 Aligned_cols=107 Identities=13% Similarity=0.060 Sum_probs=70.2
Q ss_pred CHHHHHHHHHHHHhhhhhh---hcCCCCchhHhhHhhhccCCcceEEEEecCCCCcCcccccceEEeeeCCeEEEEEEEE
Q 048770 63 SSAEKQYILNLLKANMEGP---YGSEWPAEEKVKRREMVASEARYIFARELDAPSASASEMSKTNFAESKGSIVGFVHFR 139 (243)
Q Consensus 63 ~~~~~~~i~~L~~~nm~~~---y~~~w~~~~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~~ 139 (243)
++++++++++++..++... +...+.++- ..++...... ......+++..+|++||+....
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~--------------~~~~~l~~~~~~g~~va~~~~~ 89 (142)
T PF13480_consen 27 DPADLEAFYELYRESWARRHGGFAPPFSRDF---FRDLLRSLAE--------------SGRLRLFVLYDGGEPVAFALGF 89 (142)
T ss_pred CHHHHHHHHHHHHHHHhhhhCCCCCcchHHH---HHHHHHhhcc--------------CCCEEEEEEEECCEEEEEEEEE
Confidence 6778999999988776554 211222221 1222111100 0011233444579999988654
Q ss_pred eeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEe
Q 048770 140 FCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQ 190 (243)
Q Consensus 140 ~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~ 190 (243)
... ..++.....++|+++..++|..|+..++..|.+.|++.+-+...
T Consensus 90 ~~~----~~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g~g 136 (142)
T PF13480_consen 90 RHG----GTLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFGGG 136 (142)
T ss_pred EEC----CEEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEECCC
Confidence 332 35777888889999999999999999999999999988887653
No 77
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=97.52 E-value=0.0017 Score=52.71 Aligned_cols=149 Identities=15% Similarity=0.162 Sum_probs=91.3
Q ss_pred CCHHHHHHHHHHHHhhhhhhhcCCCCc--hhHhhHhhhccCCcceEEEEecCCCCcCcccccceEEeeeCCeEEEEEEEE
Q 048770 62 LSSAEKQYILNLLKANMEGPYGSEWPA--EEKVKRREMVASEARYIFARELDAPSASASEMSKTNFAESKGSIVGFVHFR 139 (243)
Q Consensus 62 l~~~~~~~i~~L~~~nm~~~y~~~w~~--~~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~~ 139 (243)
++..+++.++.+=++-+.+.- +|.- .+.....+.-++.+.|+++.+ +|+++|++.+.
T Consensus 5 ~~~~~l~~~~rlR~~vFv~rl--gW~v~~~dg~E~DqyD~~~~~ylv~~~-------------------~g~v~g~~RLl 63 (182)
T PF00765_consen 5 LSRRLLEEMFRLRHRVFVDRL--GWDVPCEDGMEIDQYDDPDAVYLVALD-------------------DGRVVGCARLL 63 (182)
T ss_dssp HHHHHHHHHHHHHHHHHTTCS--CCCHHCCTSEE--TTGCTT-EEEEEEE-------------------TTEEEEEEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHhh--CCCCcCCCCcEeeecCCCCCeEEEEEE-------------------CCEEEEEeeec
Confidence 456667777776553222211 5542 111222334445566666655 59999999886
Q ss_pred eeec------------------CCcCEEEEEEEEEcccccC------CCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHh
Q 048770 140 FCLE------------------EDVPVLYVYELQLESRVQG------KGLGKFLMQLIELIARKNRMGAVVLTVQKANLL 195 (243)
Q Consensus 140 ~~~~------------------~~~~~~~i~~l~V~~~~rg------~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~ 195 (243)
+... ....++.+..++|+++..+ .-+...|+..+.++|..+|++.+...+.. +
T Consensus 64 ptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~~~v~V~~~---~ 140 (182)
T PF00765_consen 64 PTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIRHIVGVVDP---A 140 (182)
T ss_dssp ETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-SEEEEEEEH---H
T ss_pred cCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCCEEEEEECh---H
Confidence 4432 2357899999999988532 24677899999999999999999888865 6
Q ss_pred HHHHHHhCCCcEEeccCCCCCCCCCCCcceEEEEeeecCccchh
Q 048770 196 AMNFYLSKLRYVVSSISPSRVDPFTGVEKSYEILCKVFDNESKA 239 (243)
Q Consensus 196 A~~fY~~klGF~~~~~~p~~~~~~~g~~~~y~il~k~l~~~~~~ 239 (243)
-.+++. +.||...-..+...- | ......+.-+++.++..
T Consensus 141 ~~r~l~-r~G~~~~~lG~~~~~---~-~~~~~a~~i~v~~~~~~ 179 (182)
T PF00765_consen 141 MERILR-RAGWPVRRLGPPRSI---G-GERVVALLIPVSQETLK 179 (182)
T ss_dssp HHHHHH-HCT-EEEESSEEEEE---T-TEEEEEEEEE-SHHHHH
T ss_pred HHHHHH-HcCCceEECCCCeee---C-CeEEEEEEEECCHHHHH
Confidence 779999 999998876554221 1 12344445566555443
No 78
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=97.31 E-value=0.00034 Score=61.29 Aligned_cols=84 Identities=12% Similarity=0.086 Sum_probs=65.0
Q ss_pred ceEEeeeCCeEEEEEEEE-eeec---CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHH
Q 048770 122 KTNFAESKGSIVGFVHFR-FCLE---EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAM 197 (243)
Q Consensus 122 ~~~va~~~g~ivG~~~~~-~~~~---~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~ 197 (243)
..+|++.+.++++.++.. +..+ ...+..+|..+.+.|+|||+|+.+.||.+..+...+.|+.-..|+.. +.
T Consensus 40 n~~vi~~nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~P~-----s~ 114 (389)
T COG4552 40 NSYVIYMNQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALHPF-----SG 114 (389)
T ss_pred cceEEeehhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEeccC-----ch
Confidence 456777778888877643 1111 23456679999999999999999999999999988999887777543 34
Q ss_pred HHHHhCCCcEEecc
Q 048770 198 NFYLSKLRYVVSSI 211 (243)
Q Consensus 198 ~fY~~klGF~~~~~ 211 (243)
+||+ |+||+..+.
T Consensus 115 ~iYr-KfGye~asn 127 (389)
T COG4552 115 GIYR-KFGYEYASN 127 (389)
T ss_pred hhHh-hccccccce
Confidence 8999 999998764
No 79
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=97.17 E-value=0.018 Score=45.35 Aligned_cols=106 Identities=13% Similarity=0.120 Sum_probs=69.4
Q ss_pred CCHHHHHHHHHHHHhhhhhhhcC--CCCchhHhhHhhhccCCc---ceEEEEecCCCCcCcccccceEEeeeCCeEEEEE
Q 048770 62 LSSAEKQYILNLLKANMEGPYGS--EWPAEEKVKRREMVASEA---RYIFARELDAPSASASEMSKTNFAESKGSIVGFV 136 (243)
Q Consensus 62 l~~~~~~~i~~L~~~nm~~~y~~--~w~~~~~~k~~el~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~ 136 (243)
-++.+++.+++|+..|.-+-=.+ .+.+....-.-.+..|.. |.+-++... .+++|||+
T Consensus 32 ~d~~~l~ely~lL~~nYVEDdd~~fRf~YS~efL~WaL~pPg~~~~whiGVR~~~-----------------~~kLvgfI 94 (162)
T PF01233_consen 32 NDDEELKELYELLNENYVEDDDNMFRFDYSKEFLKWALKPPGWKKEWHIGVRVKS-----------------SKKLVGFI 94 (162)
T ss_dssp TSHHHHHHHHHHHHHHSSBTTTSSEEE---HHHHHHHHTSTT--GGGEEEEEETT-----------------TTEEEEEE
T ss_pred CCHHHHHHHHHHHHhcCccCCcceEEeeCCHHHHhheeeCcCCccceEEEEEECC-----------------CCEEEEEE
Confidence 36889999999999887432211 333444444445555543 344444332 58999999
Q ss_pred EEEeee----cCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCE
Q 048770 137 HFRFCL----EEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGA 184 (243)
Q Consensus 137 ~~~~~~----~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~ 184 (243)
...+.. +.......|.-|.|++.+|.++++-.|++.+.+.+...|+=.
T Consensus 95 saip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~q 146 (162)
T PF01233_consen 95 SAIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQ 146 (162)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--E
T ss_pred ccceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCcee
Confidence 754332 233456788999999999999999999999999988877643
No 80
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.04 E-value=0.083 Score=43.33 Aligned_cols=153 Identities=15% Similarity=0.117 Sum_probs=99.4
Q ss_pred CCCCCHHHHHHHHHHHHhhhhhhhcCCCCc--hhHhhHhhhccCCcceEEEEecCCCCcCcccccceEEeeeCCeEEEEE
Q 048770 59 GDKLSSAEKQYILNLLKANMEGPYGSEWPA--EEKVKRREMVASEARYIFARELDAPSASASEMSKTNFAESKGSIVGFV 136 (243)
Q Consensus 59 ~~~l~~~~~~~i~~L~~~nm~~~y~~~w~~--~~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~ 136 (243)
...+.+..++.++.|-..-+.+.- .|.- .+.....+.-+.+..|+++... +|+++|++
T Consensus 9 ~~~~~~~~l~em~rlR~~vF~erL--~W~v~~~~g~E~DqyD~~~t~Yll~~~~------------------~g~I~G~~ 68 (209)
T COG3916 9 RRELFPKALEEMHRLRYQVFKERL--GWDVVCIDGFEIDQYDNLDTVYLLALTS------------------DGRIVGCV 68 (209)
T ss_pred cchhcHHHHHHHHHHHHHHHHHhc--CCceeccCCccccccCCCCceEEEEEcC------------------CCcEEEEE
Confidence 345567777777777554443333 4541 1123344556677788888653 69999999
Q ss_pred EEEeeec------------------CCcCEEEEEEEEEcc--ccc---CCCH-HHHHHHHHHHHHHHcCCCEEEEEEecC
Q 048770 137 HFRFCLE------------------EDVPVLYVYELQLES--RVQ---GKGL-GKFLMQLIELIARKNRMGAVVLTVQKA 192 (243)
Q Consensus 137 ~~~~~~~------------------~~~~~~~i~~l~V~~--~~r---g~Gl-G~~L~~~l~~~a~~~~~~~i~l~v~~~ 192 (243)
.+..... ....++....++|++ .-+ +.+. +..|+..+.+++...|+++|...|..
T Consensus 69 RlLptt~P~mL~~vF~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~~~IvtVt~~- 147 (209)
T COG3916 69 RLLPTTGPYMLTDVFPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGITGIVTVTDT- 147 (209)
T ss_pred EeccCCCcchhhhhhHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcCCceEEEEEch-
Confidence 8753321 234677888888876 222 2333 66788999999999999999988876
Q ss_pred CHhHHHHHHhCCCcEEeccCCCCCCCCCCCcceEEEEeeecCccchh
Q 048770 193 NLLAMNFYLSKLRYVVSSISPSRVDPFTGVEKSYEILCKVFDNESKA 239 (243)
Q Consensus 193 N~~A~~fY~~klGF~~~~~~p~~~~~~~g~~~~y~il~k~l~~~~~~ 239 (243)
.-.+.+. +.||......|... .|.+ .-..+..+++.++.+
T Consensus 148 --~meril~-r~Gw~~~riG~~~~---ig~~-~~VA~~l~i~~~s~~ 187 (209)
T COG3916 148 --GMERILR-RAGWPLTRIGPPLT---IGNE-RAVALLLDIDRESLE 187 (209)
T ss_pred --HHHHHHH-HcCCCeEEcCCcee---eCCe-eEEEEEeecCHHHHH
Confidence 4558888 99999887666532 2222 344556677666544
No 81
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=96.79 E-value=0.038 Score=44.62 Aligned_cols=78 Identities=17% Similarity=0.199 Sum_probs=53.9
Q ss_pred CeEEEEEEEE-eee---cCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCC
Q 048770 130 GSIVGFVHFR-FCL---EEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLR 205 (243)
Q Consensus 130 g~ivG~~~~~-~~~---~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klG 205 (243)
.++|+.+++. +.+ ....+..++.-.+++|+|||+|+++.+-+.+.+.....+. ...++ .|..+.+||.+-+|
T Consensus 56 ~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~~~-N~~~~---~~~~~~~~w~k~~G 131 (181)
T PF06852_consen 56 DRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSVDD-NSVAQ---GNVKMSNFWHKMFG 131 (181)
T ss_pred CcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhccCCC-ceeee---cCHHHHHHHHHHhC
Confidence 6788877653 332 2346788999999999999999997555666555444333 23333 45578899987889
Q ss_pred cEEecc
Q 048770 206 YVVSSI 211 (243)
Q Consensus 206 F~~~~~ 211 (243)
|...+.
T Consensus 132 ~~~~~h 137 (181)
T PF06852_consen 132 FDDYGH 137 (181)
T ss_pred CCCCcc
Confidence 877665
No 82
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=96.72 E-value=0.02 Score=42.74 Aligned_cols=80 Identities=19% Similarity=0.376 Sum_probs=53.3
Q ss_pred CCeEEEEEEEE------eeecCC----cCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHH
Q 048770 129 KGSIVGFVHFR------FCLEED----VPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMN 198 (243)
Q Consensus 129 ~g~ivG~~~~~------~~~~~~----~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~ 198 (243)
.|.++|+.-+. ++.... .+...|-+++|++..|++|+|+.|.+.++. ..++.--.+.+..-...-++
T Consensus 17 ~g~viG~LKVG~K~Lfl~d~~g~~~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~---~e~~~p~~~a~DrPS~Kll~ 93 (120)
T PF05301_consen 17 KGAVIGFLKVGYKKLFLLDERGQHREIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQ---EENVSPHQLAIDRPSPKLLS 93 (120)
T ss_pred CceEEEEEEEeeeeEEEEcCCCCEEEecccceeeeEEEEeceeccCchHHHHHHHHH---HcCCCcccceecCCcHHHHH
Confidence 47899998442 222211 233356899999999999999999999874 44555556666666677788
Q ss_pred HHHhCCCcEEeccCC
Q 048770 199 FYLSKLRYVVSSISP 213 (243)
Q Consensus 199 fY~~klGF~~~~~~p 213 (243)
|.++.+| .....|
T Consensus 94 Fl~Khy~--L~~~ip 106 (120)
T PF05301_consen 94 FLKKHYG--LQRYIP 106 (120)
T ss_pred HHHHhcC--CCcCCC
Confidence 8874444 444444
No 83
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=96.71 E-value=0.047 Score=46.22 Aligned_cols=66 Identities=9% Similarity=0.085 Sum_probs=53.2
Q ss_pred cCEEEEEEEEEcccccCC--------C--------------------HHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHH
Q 048770 146 VPVLYVYELQLESRVQGK--------G--------------------LGKFLMQLIELIARKNRMGAVVLTVQKANLLAM 197 (243)
Q Consensus 146 ~~~~~i~~l~V~~~~rg~--------G--------------------lG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~ 197 (243)
..++.+..++|++++|++ | +...|+..+..+|..+|++.++..+.+ .-.
T Consensus 109 ~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~---~l~ 185 (241)
T TIGR03694 109 SRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALSSANGITHWYAIMEP---RLA 185 (241)
T ss_pred CceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHHHHCCCcEEEEEeCH---HHH
Confidence 467889999999999974 2 456788999999999999998887776 466
Q ss_pred HHHHhCCCcEEeccCCCC
Q 048770 198 NFYLSKLRYVVSSISPSR 215 (243)
Q Consensus 198 ~fY~~klGF~~~~~~p~~ 215 (243)
+++. ++|+......|..
T Consensus 186 r~l~-r~G~~~~~lG~~~ 202 (241)
T TIGR03694 186 RLLS-RFGIQFRQVGPPV 202 (241)
T ss_pred HHHH-HhCCceEEcCCCe
Confidence 7888 9999877665543
No 84
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=96.60 E-value=0.003 Score=57.37 Aligned_cols=78 Identities=24% Similarity=0.365 Sum_probs=57.4
Q ss_pred CCeEEEEEEEEeeecCC-----c-CEEE-----EEEEE--E---cccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecC
Q 048770 129 KGSIVGFVHFRFCLEED-----V-PVLY-----VYELQ--L---ESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKA 192 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~-----~-~~~~-----i~~l~--V---~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~ 192 (243)
++-++||..+++..+.. . +... ++... | ...+|.+|+|+.||+.++.+|++.++.+|.+....
T Consensus 415 ~d~lig~lrlR~p~e~~~r~e~~~~~aivrelhvyg~~vpig~~~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgi- 493 (515)
T COG1243 415 NDILIGFLRLREPSEGAHREEIDDKTAIVRELHVYGSEVPIGKREDEWQHRGYGRELLEEAERIAREEGAKKILVISGI- 493 (515)
T ss_pred hhhhhheeeecccccchhhhhcccchhhhhhhhccccccccccCcchhhcccHHHHHHHHHHHHHHhhccccEEEEecc-
Confidence 36799999887654410 0 1111 11111 1 46799999999999999999999999888876555
Q ss_pred CHhHHHHHHhCCCcEEec
Q 048770 193 NLLAMNFYLSKLRYVVSS 210 (243)
Q Consensus 193 N~~A~~fY~~klGF~~~~ 210 (243)
++..+|. |+||...|
T Consensus 494 --G~ReYy~-k~GY~~~g 508 (515)
T COG1243 494 --GVREYYR-KLGYELDG 508 (515)
T ss_pred --cHHHHHH-HhCccccC
Confidence 7889999 99999887
No 85
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=95.95 E-value=0.051 Score=45.03 Aligned_cols=100 Identities=22% Similarity=0.121 Sum_probs=73.3
Q ss_pred cceEEeeeC-CeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHH
Q 048770 121 SKTNFAESK-GSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNF 199 (243)
Q Consensus 121 ~~~~va~~~-g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~f 199 (243)
+.++.++.+ |++||.+.-.+....+....|-+.+.|.|+++|.|+|-.|=..=.+.+...|+..|..|-.+-|.---.|
T Consensus 46 GlvlgAf~~dg~lVGls~G~pg~r~g~~y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~~~G~tli~WTfDPl~alNA~f 125 (266)
T COG3375 46 GLVLGAFSADGRLVGLSYGYPGGRGGSLYLYSHMLGVREEVKGSGLGVALKMKQRERALSMGYTLIAWTFDPLNALNARF 125 (266)
T ss_pred CeEEEEEcCCCcEEEEEeccCCcCCCceeeeeeehhccccccccchhhhhHHHHHHHHHhcCeeeEEEecccchhhhhhc
Confidence 455555554 5999987644422244445667789999999999999999888888999999999999998887655455
Q ss_pred HHhCCCcEEeccCCCCCCCCC
Q 048770 200 YLSKLRYVVSSISPSRVDPFT 220 (243)
Q Consensus 200 Y~~klGF~~~~~~p~~~~~~~ 220 (243)
=-.|+|-...-..++.++++.
T Consensus 126 Ni~KLGa~artYi~nfYg~m~ 146 (266)
T COG3375 126 NISKLGAIARTYIKNFYGEMA 146 (266)
T ss_pred chhhhceeEEEeeccccchhc
Confidence 434888777666666665543
No 86
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=95.92 E-value=0.011 Score=40.00 Aligned_cols=29 Identities=14% Similarity=0.126 Sum_probs=24.9
Q ss_pred EEEEEEEEEcccccCCCHHHHHHHHHHHH
Q 048770 148 VLYVYELQLESRVQGKGLGKFLMQLIELI 176 (243)
Q Consensus 148 ~~~i~~l~V~~~~rg~GlG~~L~~~l~~~ 176 (243)
.+-|..|.|+|.+|++||++.||+.+...
T Consensus 5 ~~GI~RIWV~~~~RR~GIAt~Lld~ar~~ 33 (70)
T PF13880_consen 5 VCGISRIWVSPSHRRKGIATRLLDAAREN 33 (70)
T ss_pred EEEeEEEEeChhhhhhhHHHHHHHHHHHh
Confidence 34578999999999999999999987653
No 87
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=95.87 E-value=0.06 Score=39.13 Aligned_cols=66 Identities=14% Similarity=0.095 Sum_probs=49.1
Q ss_pred EEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHh
Q 048770 124 NFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLL 195 (243)
Q Consensus 124 ~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~ 195 (243)
+.++.++...|++.+.... .+..+.|+.-+.|.+..||.|+|..|+..+.+- ...+...+.++|+.
T Consensus 11 ~~~y~~e~y~~~aIvt~~~-~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d-----~~~L~Wrsr~~n~~ 76 (99)
T cd04264 11 HAIYLSEGYNAAAIVTYEG-VNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRD-----FPKLFWRSRKTNPI 76 (99)
T ss_pred eEEEEeCCceEEEEEeccC-CCCCceEEEEEEEchhhhhcChHHHHHHHHHhh-----CCceEEEeCCCCcc
Confidence 3344456677777764322 134678999999999999999999999987632 46788899888874
No 88
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=95.79 E-value=0.035 Score=44.95 Aligned_cols=49 Identities=20% Similarity=0.178 Sum_probs=35.2
Q ss_pred CeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcC
Q 048770 130 GSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNR 181 (243)
Q Consensus 130 g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~ 181 (243)
-.+|||.+=.-.. ....-+..|.|.|.||++|+|++|++.--..++..+
T Consensus 65 ~h~vGyFSKEk~s---~~~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~ 113 (188)
T PF01853_consen 65 FHIVGYFSKEKES---WDNNNLSCILTLPPYQRKGYGRFLIDFSYELSRREG 113 (188)
T ss_dssp EEEEEEEEEESS----TT-EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred ceeEEEEEEEecc---cCCeeEeehhhcchhhhcchhhhhhhhHHHHhhccC
Confidence 4788886632111 122346779999999999999999999888888775
No 89
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=95.59 E-value=0.19 Score=44.28 Aligned_cols=79 Identities=8% Similarity=0.002 Sum_probs=59.1
Q ss_pred eCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcE
Q 048770 128 SKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 128 ~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
.+|++||.+.+.... ..++.+.....++++..+-+..|+-.+++.|.+.|+....+.....|.+..+|=+ +.||+
T Consensus 203 ~~g~~va~~l~~~~~----~~~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~~~FK~-~~G~~ 277 (330)
T TIGR03019 203 GDGVVASAVLSFYFR----DEVLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFKFKK-NWGFE 277 (330)
T ss_pred CCCCEEEEEEEEEeC----CEEEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCccHHHHh-cCCCe
Confidence 368888876543221 1233334566789999999999999999999999999999977666666667777 89999
Q ss_pred Eecc
Q 048770 208 VSSI 211 (243)
Q Consensus 208 ~~~~ 211 (243)
....
T Consensus 278 ~~~l 281 (330)
T TIGR03019 278 PQPL 281 (330)
T ss_pred eccc
Confidence 7653
No 90
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=95.42 E-value=0.061 Score=46.26 Aligned_cols=50 Identities=24% Similarity=0.319 Sum_probs=37.0
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcC
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNR 181 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~ 181 (243)
+..+|||.+=--...++. -+..|.|.|.||++|+|++|++..-.+++..|
T Consensus 139 g~h~vGYFSKEK~s~~~n---NLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 139 GSHIVGYFSKEKVSAEDY---NLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred CcEEEEEeceeccccCCC---cEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 468999865321211222 27778999999999999999999888887765
No 91
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=95.40 E-value=0.024 Score=49.86 Aligned_cols=48 Identities=31% Similarity=0.502 Sum_probs=40.2
Q ss_pred cccCCCHHHHHHHHHHHHHHHc-CCCEEEEEEecCCHhHHHHHHhCCCcEEec
Q 048770 159 RVQGKGLGKFLMQLIELIARKN-RMGAVVLTVQKANLLAMNFYLSKLRYVVSS 210 (243)
Q Consensus 159 ~~rg~GlG~~L~~~l~~~a~~~-~~~~i~l~v~~~N~~A~~fY~~klGF~~~~ 210 (243)
.||.+|+|+.||+.++.+|+.. |-.+|-+-... +...+|. ++||+..|
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGV---GtR~YY~-klGY~LdG 546 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVISGV---GTRNYYR-KLGYELDG 546 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEecc---chHHHHH-hhCeeecC
Confidence 7999999999999999999876 77777664443 5568999 99999887
No 92
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.02 E-value=0.072 Score=48.96 Aligned_cols=77 Identities=17% Similarity=0.248 Sum_probs=63.5
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecC--CHhHHHHHHhCCCc
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKA--NLLAMNFYLSKLRY 206 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~--N~~A~~fY~~klGF 206 (243)
|+-+||++++.-. ...+.|..+.++-..=|+++-+.||..+++.|...|++.+...-.+. |..-..||+ ++||
T Consensus 471 DnGiigvviv~kk----~~~w~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~pt~kN~pv~~FyE-~mgf 545 (574)
T COG3882 471 DNGIIGVVIVEKK----ESEWFIDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIPTEKNAPVSDFYE-RMGF 545 (574)
T ss_pred cCceEEEEEEEec----CCeEEhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEecccccCCcHHHHHH-Hhcc
Confidence 4568898887422 24567778888888889999999999999999999999999876554 888899999 9999
Q ss_pred EEec
Q 048770 207 VVSS 210 (243)
Q Consensus 207 ~~~~ 210 (243)
+..+
T Consensus 546 ~l~~ 549 (574)
T COG3882 546 KLKG 549 (574)
T ss_pred cccc
Confidence 9665
No 93
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=94.76 E-value=0.17 Score=36.80 Aligned_cols=60 Identities=15% Similarity=0.104 Sum_probs=43.1
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHh
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLL 195 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~ 195 (243)
++..=|++.+.... ...+.|+.-+.|.+..||.|+|..|+..+.+- ..++...+..+|+.
T Consensus 17 ~e~y~~~aivt~~~--~~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d-----~~~L~Wrsr~~n~~ 76 (99)
T cd04265 17 SEGYNAAAIVTNEE--VDGVPYLDKFAVSSSAQGEGTGEALWRRLRRD-----FPKLFWRSRSTNPI 76 (99)
T ss_pred eCCCcEEEEEeccC--CCCceEEEEEEEchhhhhcChHHHHHHHHHhh-----CCceEEEeCCCCcc
Confidence 34444555443221 13578999999999999999999999987632 34688888888863
No 94
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.57 E-value=0.38 Score=40.00 Aligned_cols=75 Identities=12% Similarity=0.126 Sum_probs=51.2
Q ss_pred CeEEEEEEE------Eeeec---CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHH
Q 048770 130 GSIVGFVHF------RFCLE---EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFY 200 (243)
Q Consensus 130 g~ivG~~~~------~~~~~---~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY 200 (243)
+.+.|++-+ .++.. .....+.|-+++|++..|++|.|..|++++.. +.+..-=.+.+..-....++|.
T Consensus 81 s~l~GllKVG~KkLfl~D~~~~~ye~e~lcILDFyVheS~QR~G~G~~lfdyMl~---kE~vephQ~a~DrPS~kLl~Fm 157 (264)
T KOG4601|consen 81 SILKGLLKVGYKKLFLTDNEQNQYEEEALCILDFYVHESEQRSGNGFKLFDYMLK---KENVEPHQCAFDRPSAKLLQFM 157 (264)
T ss_pred hheeeeehccceeEEEeccHhhhhccCCceEEEEEeehhhhhcCchHHHHHHHHH---hcCCCchheeccChHHHHHHHH
Confidence 578888743 22222 22345668899999999999999999999863 4555544555555555567888
Q ss_pred HhCCCcE
Q 048770 201 LSKLRYV 207 (243)
Q Consensus 201 ~~klGF~ 207 (243)
++++|.+
T Consensus 158 ~khYgl~ 164 (264)
T KOG4601|consen 158 EKHYGLK 164 (264)
T ss_pred HHhcCcc
Confidence 7566654
No 95
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=94.52 E-value=0.18 Score=48.41 Aligned_cols=86 Identities=19% Similarity=0.235 Sum_probs=57.8
Q ss_pred EEEEEEEEcccccCCCHHHHHHHHHHHHHHHc--CCC-----------EEE-----------------------------
Q 048770 149 LYVYELQLESRVQGKGLGKFLMQLIELIARKN--RMG-----------AVV----------------------------- 186 (243)
Q Consensus 149 ~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~--~~~-----------~i~----------------------------- 186 (243)
+.|..|+|+|+|++.|+|++.++.+.++.... .++ ++.
T Consensus 615 aRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG~~~~i~e~~~~~~~~~k~v~e~~~vsllee~i~pR~~lppLL~~L~er~ 694 (1011)
T KOG2036|consen 615 ARIVRIAVHPEYQKMGYGSRAVQLLTDYFEGKFTSISEDVLAVDHSIKRVEEAEKVSLLEEQIKPRKDLPPLLLKLSERP 694 (1011)
T ss_pred ceEEEEEeccchhccCccHHHHHHHHHHHhccCCCccccccccCccccccchhhhhhhhhhhcccccCCCceeeEcccCC
Confidence 45899999999999999999999999887543 111 000
Q ss_pred ------EEEec-CCHhHHHHHHhCCCcEEeccCCCCCCCCCCCcceEEEEeeecCccch
Q 048770 187 ------LTVQK-ANLLAMNFYLSKLRYVVSSISPSRVDPFTGVEKSYEILCKVFDNESK 238 (243)
Q Consensus 187 ------l~v~~-~N~~A~~fY~~klGF~~~~~~p~~~~~~~g~~~~y~il~k~l~~~~~ 238 (243)
+.|.- --..-.+||. ++||.++.......+ .+|+ .=.||-++++.+..
T Consensus 695 perldylGvSfGLT~~L~kFWk-~~gF~PvylrQt~n~-lTGE--HtcimLk~L~~~e~ 749 (1011)
T KOG2036|consen 695 PERLDYLGVSFGLTPSLLKFWK-KNGFVPVYLRQTSND-LTGE--HTCIMLKTLEGDES 749 (1011)
T ss_pred CcccceeeecccCCHHHHHHHH-hcCceeEEeeccccc-cccc--eeEEEEecCCCccc
Confidence 11111 1244589999 999999885443322 3444 56788899886543
No 96
>PLN03239 histone acetyltransferase; Provisional
Probab=94.48 E-value=0.12 Score=45.75 Aligned_cols=50 Identities=18% Similarity=0.166 Sum_probs=36.1
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcC
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNR 181 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~ 181 (243)
+-.+|||.+=--....+. -+..|.|.|.||++|+|++|++.--.+++..|
T Consensus 197 g~h~vGYFSKEK~s~~~~---NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 197 GFHPVGYYSKEKYSDVGY---NLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred ceEEEEEeeecccCCCCC---ceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 357888855221111122 37788999999999999999999888887765
No 97
>PTZ00064 histone acetyltransferase; Provisional
Probab=94.29 E-value=0.12 Score=47.71 Aligned_cols=50 Identities=22% Similarity=0.159 Sum_probs=36.6
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcC
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNR 181 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~ 181 (243)
+-.+|||..=--..... .-+..|.|.|.||++|+|++|++.--.+++..|
T Consensus 368 G~HiVGYFSKEK~S~~~---nNLACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 368 GCHIVGYFSKEKVSLLH---YNLACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred CcEEEEEecccccCccc---CceEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 45899986522111122 237788999999999999999999888887765
No 98
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=93.81 E-value=0.2 Score=42.91 Aligned_cols=65 Identities=12% Similarity=0.203 Sum_probs=54.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEeccCCCCCCCCCCCcceEEEEeeecCcc
Q 048770 163 KGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSISPSRVDPFTGVEKSYEILCKVFDNE 236 (243)
Q Consensus 163 ~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~~~~~~~g~~~~y~il~k~l~~~ 236 (243)
.|-...|+..+...|++.|+.+|.+-|...+ ..+|+ +.||...+..|..+.+ + +-.+|++.++.+
T Consensus 20 ~~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~---~~~~~-~~g~~~e~~i~~~f~g---~--~~~~~~~~~~~~ 84 (266)
T TIGR03827 20 GNDVEALIPDLDALAKKEGYTKIIAKVPGSD---KPLFE-ERGYLEEAKIPGYFNG---H--DAYFMSKYLDED 84 (266)
T ss_pred CccHHHHHHHHHHHHHHcCCcEEEEEccHHH---HHHHH-HCCCeEEEecccccCC---C--ceEEEEEcCchH
Confidence 3447889999999999999999999998865 58999 9999999999976643 3 568899988764
No 99
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=93.43 E-value=0.45 Score=42.14 Aligned_cols=103 Identities=15% Similarity=0.132 Sum_probs=66.3
Q ss_pred CHHHHHHHHHHHHhhhhhhhcC--CCCchhHhhHhhhccCC---cceEEEEecCCCCcCcccccceEEeeeCCeEEEEEE
Q 048770 63 SSAEKQYILNLLKANMEGPYGS--EWPAEEKVKRREMVASE---ARYIFARELDAPSASASEMSKTNFAESKGSIVGFVH 137 (243)
Q Consensus 63 ~~~~~~~i~~L~~~nm~~~y~~--~w~~~~~~k~~el~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~ 137 (243)
+..+++.++.|+.+|.-+.-.+ -+.+..+.-...+..|. .|.+-++-.. .+++|||++
T Consensus 90 ~~~~l~el~~lL~enyVEd~~~m~rf~Ys~eFl~Wal~~pg~~~~WHiGVRv~~-----------------s~kLVaFIs 152 (421)
T KOG2779|consen 90 DFKDLEELYNLLNENYVEDDDSMFRFDYSPEFLKWALQPPGWKKEWHIGVRVKS-----------------SKKLVAFIS 152 (421)
T ss_pred cHhHHHHHHhhcccCCCCccccchhhhccHHHHHhhhcCCCCccceEEEEEEec-----------------CCceEEEEe
Confidence 4567888888888875432221 33333333333444443 2333333322 579999997
Q ss_pred EEee----ecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCC
Q 048770 138 FRFC----LEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRM 182 (243)
Q Consensus 138 ~~~~----~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~ 182 (243)
..+. .+.....+.|..+.|+...|+++++--|+..+...+.-.|+
T Consensus 153 aiP~~irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~gI 201 (421)
T KOG2779|consen 153 AIPATIRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEGI 201 (421)
T ss_pred ccccEEEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhhh
Confidence 5432 22445577899999999999999999999999887766554
No 100
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=93.40 E-value=0.12 Score=47.23 Aligned_cols=50 Identities=24% Similarity=0.306 Sum_probs=36.2
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcC
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNR 181 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~ 181 (243)
+-.+|||.+=--...++ .-+..|.+.|.||++|+|++|++.--.+++..|
T Consensus 290 g~h~vGyFSKEk~s~~~---~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 290 GCHMVGYFSKEKHSEED---YNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred CcEEEEEecccccCcCC---CceEEEEecchhhhcchhheehhheehhhhccC
Confidence 45899986532111122 237788999999999999999998888777665
No 101
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=92.90 E-value=0.085 Score=47.99 Aligned_cols=84 Identities=13% Similarity=0.120 Sum_probs=55.2
Q ss_pred EEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEE-----EecCCHhHHHHHHhCCCcEEeccCCCCCCCCCCC
Q 048770 148 VLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLT-----VQKANLLAMNFYLSKLRYVVSSISPSRVDPFTGV 222 (243)
Q Consensus 148 ~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~-----v~~~N~~A~~fY~~klGF~~~~~~p~~~~~~~g~ 222 (243)
..-|..+.|+|+||+-|+|..-|..+.++..+..+..+.-. +-..-..=-.||+ +.||+......+ |.
T Consensus 241 aariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe-~~gfkylwdtas------Gr 313 (593)
T COG2401 241 AARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFE-KVGFKYLWDTAS------GR 313 (593)
T ss_pred hhheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhh-hhceeeeeecCC------CC
Confidence 34588999999999999999999999999988754433321 1000001125999 999998764333 11
Q ss_pred cceEEEEeeecCccchhccc
Q 048770 223 EKSYEILCKVFDNESKALLQ 242 (243)
Q Consensus 223 ~~~y~il~k~l~~~~~~~~~ 242 (243)
-+|-.++..+|+.+++
T Consensus 314 ----Pvl~~plteEa~r~i~ 329 (593)
T COG2401 314 ----PVLPTPLTEEAKRYID 329 (593)
T ss_pred ----eeeccchhHHHHHHHH
Confidence 2344777777775543
No 102
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=92.72 E-value=0.99 Score=34.39 Aligned_cols=63 Identities=13% Similarity=0.092 Sum_probs=47.2
Q ss_pred eCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCH
Q 048770 128 SKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANL 194 (243)
Q Consensus 128 ~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~ 194 (243)
.+|++||.+.+-...+.-. .|+. +-+|++...++|+..+-.-+.+|++.|+.-+.|.=...+-
T Consensus 46 ~~~kLiav~v~D~l~~glS---aVY~-fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~YLGY~I~~c 108 (128)
T PF04377_consen 46 LDGKLIAVAVVDILPDGLS---AVYT-FYDPDYSKRSLGTYSILREIELARELGLPYYYLGYWIHGC 108 (128)
T ss_pred eCCeEEEEEEeecccchhh---heee-eeCCCccccCcHHHHHHHHHHHHHHcCCCEEeeCeEeCCC
Confidence 4799999988754443221 1333 3499999999999999888899999999988886655544
No 103
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=90.85 E-value=9.3 Score=34.50 Aligned_cols=127 Identities=13% Similarity=0.065 Sum_probs=73.4
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHhhhhhhhcCCCCchhHhhHhhhcc--CCcceEEEEecCCCCcCcccccceEEeeeC
Q 048770 52 VHLESGCGDKLSSAEKQYILNLLKANMEGPYGSEWPAEEKVKRREMVA--SEARYIFARELDAPSASASEMSKTNFAESK 129 (243)
Q Consensus 52 ~~l~~~~~~~l~~~~~~~i~~L~~~nm~~~y~~~w~~~~~~k~~el~~--~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 129 (243)
|+++...+.++++++++.++.+...+....++.++-..+- ...+.. ++.- ..+++..+
T Consensus 200 i~~~~l~G~~i~~~~~~~f~~~Y~~Ty~k~~~~~yLt~~F--F~~l~~~m~~~~------------------~l~~A~~~ 259 (370)
T PF04339_consen 200 IRIRTLTGDEITDEDWDRFYRLYQNTYAKRWGRPYLTREF--FEQLAETMPEQV------------------VLVVARRD 259 (370)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHHHHhhCCChhhcHHH--HHHHHHhCcCCE------------------EEEEEEEC
Confidence 4666668999999999999988876655443322211111 111211 1111 12333447
Q ss_pred CeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHH-HHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEE
Q 048770 130 GSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLM-QLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVV 208 (243)
Q Consensus 130 g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~-~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~ 208 (243)
|++||+..+.... ..+|-.......++. ++==.++ =..+++|-++|++.+...+.... ++ ..||.+
T Consensus 260 g~~Va~aL~l~~~----~~LyGRYwG~~~~~~--~LHFe~cYYq~Ie~aI~~Gl~~f~~GaqGEH----K~---~RGf~P 326 (370)
T PF04339_consen 260 GQPVAFALCLRGD----DTLYGRYWGCDEEIP--FLHFELCYYQGIEYAIEHGLRRFEPGAQGEH----KI---ARGFEP 326 (370)
T ss_pred CeEEEEEEEEEeC----CEEEEeeeccccccc--CcchHHHHHHHHHHHHHcCCCEEECCcchhH----HH---HcCCcc
Confidence 9999998765443 234433344444443 3333333 45678899999998887765432 33 558887
Q ss_pred ecc
Q 048770 209 SSI 211 (243)
Q Consensus 209 ~~~ 211 (243)
+.+
T Consensus 327 ~~t 329 (370)
T PF04339_consen 327 VPT 329 (370)
T ss_pred ccc
Confidence 764
No 104
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=90.03 E-value=0.46 Score=42.78 Aligned_cols=32 Identities=22% Similarity=0.286 Sum_probs=26.5
Q ss_pred EEEEEEEcccccCCCHHHHHHHHHHHHHHHcC
Q 048770 150 YVYELQLESRVQGKGLGKFLMQLIELIARKNR 181 (243)
Q Consensus 150 ~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~ 181 (243)
-+..|-|.|.||++|+|++|++.--.+.+..|
T Consensus 262 NlaCILtLPpyQRkGYGklLIdFSYeLSr~E~ 293 (396)
T KOG2747|consen 262 NLACILTLPPYQRKGYGKLLIDFSYELSRREG 293 (396)
T ss_pred ceeeeeecChhhhcccchhhhhhhhhhhcccC
Confidence 37778899999999999999988777765543
No 105
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=89.27 E-value=2.5 Score=35.82 Aligned_cols=63 Identities=16% Similarity=0.131 Sum_probs=48.1
Q ss_pred eCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCH
Q 048770 128 SKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANL 194 (243)
Q Consensus 128 ~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~ 194 (243)
.+|++||.+.+-...+.- . .|+ .+-+|++-..++|+..+-.-+.+|++.|+.-++|.-...+-
T Consensus 151 ~~g~LiaVav~D~l~d~l-S--AVY-~FyDPd~~~~SLG~~~iL~qI~~ak~~gl~y~YLGY~I~~c 213 (240)
T PRK01305 151 GDGKLVAVAVTDVLDDGL-S--AVY-TFYDPDEEHRSLGTFAILWQIELAKRLGLPYVYLGYWIKGS 213 (240)
T ss_pred eCCeEEEEEEEeccCCce-e--eEE-EeeCCCccccCCHHHHHHHHHHHHHHcCCCeEeeeEEECCC
Confidence 479999998875433221 1 232 34599999999999999888999999999999997776654
No 106
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=88.89 E-value=9.3 Score=34.23 Aligned_cols=44 Identities=23% Similarity=0.258 Sum_probs=31.9
Q ss_pred EEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCH
Q 048770 150 YVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANL 194 (243)
Q Consensus 150 ~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~ 194 (243)
-|..|-+.|.|||+|+|+.|++.+....... -.-+-+||...+.
T Consensus 219 RiSQmlilpPfq~~Glgs~l~E~i~r~~~~~-p~v~DiTVEdPse 262 (403)
T KOG2696|consen 219 RISQMLILPPFQGKGLGSQLYEAIARDYLEE-PTVLDITVEDPSE 262 (403)
T ss_pred hhheeEEeccccCCchHHHHHHHHHHhhccC-CceeEEEecCchH
Confidence 4778889999999999999999887443222 2345667765443
No 107
>PHA00432 internal virion protein A
Probab=88.58 E-value=2.3 Score=32.74 Aligned_cols=81 Identities=12% Similarity=0.117 Sum_probs=51.9
Q ss_pred eEEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcc--cccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHH
Q 048770 123 TNFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLES--RVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFY 200 (243)
Q Consensus 123 ~~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~--~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY 200 (243)
++....+|.++++.. ..+.+++.+..=+|.. .-..+..-+.++..+..... ....++-.|...|..+++|.
T Consensus 39 ~~~~~~~G~~~aI~G-----n~G~~vW~v~T~~v~~~~~~~~reF~k~~~~~ld~ml~--~yp~LwNyV~~~N~~hir~L 111 (137)
T PHA00432 39 CVTLSLDGFVLAIGG-----NQGDQVWFVTSDQVWRLTKKEKREFRKLIMEYRDMMLD--QYPSLWNYVWVGNKSHIRFL 111 (137)
T ss_pred EEEEecCCeEEEEec-----CCCCceEEEecHHhhhCChhhhHHHHHHHHHHHHHHHH--hhhhhheeeecCCHHHHHHH
Confidence 455556799988763 4455666665555533 11122333333344433333 35678889999999999999
Q ss_pred HhCCCcEEecc
Q 048770 201 LSKLRYVVSSI 211 (243)
Q Consensus 201 ~~klGF~~~~~ 211 (243)
+ .+||+....
T Consensus 112 k-~lGf~f~~e 121 (137)
T PHA00432 112 K-SIGAVFHNE 121 (137)
T ss_pred H-HcCeeeecc
Confidence 9 999998874
No 108
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=88.57 E-value=2.2 Score=37.92 Aligned_cols=57 Identities=21% Similarity=0.232 Sum_probs=32.5
Q ss_pred EEEEEEEEcccccCCCHHHHHHHHHHH-HHHHc--CCCEEEEEEe---cCCHhHHHHHHhCCCcE
Q 048770 149 LYVYELQLESRVQGKGLGKFLMQLIEL-IARKN--RMGAVVLTVQ---KANLLAMNFYLSKLRYV 207 (243)
Q Consensus 149 ~~i~~l~V~~~~rg~GlG~~L~~~l~~-~a~~~--~~~~i~l~v~---~~N~~A~~fY~~klGF~ 207 (243)
-.|..++++|+||+-|.|+.|-..-.. +|... =-++|..... ..| +--.||+ .+|-+
T Consensus 122 sEl~tLfL~p~~R~~~~G~lLSr~RfLFiA~~~~rF~~~viAElrG~~De~-G~SPFWd-alG~~ 184 (342)
T PF04958_consen 122 SELCTLFLDPDYRGGGNGRLLSRSRFLFIAQHRERFADRVIAELRGVSDED-GRSPFWD-ALGRH 184 (342)
T ss_dssp EEEEEEEE-GGGTTSHHHHHHHHHHHHHHHH-GGGS-SEEEEE--B---TT----HHHH-HTGGG
T ss_pred eeeEEEEECHHHcCCchHHHHHHHHHHHHHhChhhcchheeeeccCCcCCC-CCCchHH-Hhhcc
Confidence 457889999999999999999844333 33222 2345555432 222 2337887 77744
No 109
>PRK14852 hypothetical protein; Provisional
Probab=88.45 E-value=3.9 Score=41.38 Aligned_cols=89 Identities=12% Similarity=0.062 Sum_probs=67.8
Q ss_pred cceEEeeeCCeEEEEEEEEeeec-------------------CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcC
Q 048770 121 SKTNFAESKGSIVGFVHFRFCLE-------------------EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNR 181 (243)
Q Consensus 121 ~~~~va~~~g~ivG~~~~~~~~~-------------------~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~ 181 (243)
+.+|++...+.++|..++..+.. .+..++.+..+.+++..|..-+--.+++.+..++...+
T Consensus 75 t~~~i~k~~~~~l~T~t~~~ds~~~Gl~~D~lf~~eLd~lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~ 154 (989)
T PRK14852 75 TSVFIFKSYHDVLCTLTHIPDSGLFGLPMDTLYKPEVDALRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSE 154 (989)
T ss_pred ceEEEeccCCcEEEEEEEecCCcccCcCHHHHHHHHHHHHHHcCCeEEeeehheechhhcccchhHHHHHHHHHHHHHcC
Confidence 34455555566777776654422 34577889999999988887777788888888887789
Q ss_pred CCEEEEEEecCCHhHHHHHHhCCCcEEeccC
Q 048770 182 MGAVVLTVQKANLLAMNFYLSKLRYVVSSIS 212 (243)
Q Consensus 182 ~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~ 212 (243)
++-+.++|.+... .||++-+||+..+..
T Consensus 155 ~dd~~i~VnPkH~---~FY~r~l~f~~ig~~ 182 (989)
T PRK14852 155 VDDILVTVNPKHV---KFYTDIFLFKPFGEV 182 (989)
T ss_pred CCeEEEEECcchH---HHHHHHhCCcccccc
Confidence 9999999988655 899878999999853
No 110
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=88.39 E-value=4.5 Score=31.34 Aligned_cols=85 Identities=16% Similarity=0.152 Sum_probs=55.1
Q ss_pred cceEEee-eCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHH
Q 048770 121 SKTNFAE-SKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNF 199 (243)
Q Consensus 121 ~~~~va~-~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~f 199 (243)
+++|++. .+|++.||+...-.+....+++++..|.+.|. +....-.-|+.++..-|-+.++-.|.+.+.+. ...-
T Consensus 55 gHSFvA~~e~~~~~GfvLAQaVWQGdrptVlV~ri~~~~~-~~~~~~~GLLrAvvKSAYDa~VYEv~l~l~p~---l~~A 130 (161)
T PF09390_consen 55 GHSFVAEDEGGELQGFVLAQAVWQGDRPTVLVRRILLAPG-EPEEVYEGLLRAVVKSAYDAGVYEVHLHLDPE---LEAA 130 (161)
T ss_dssp S--EEEE-ETTEEEEEEEEEEEE-SSSEEEEEEEE---EE-SSHHHHHHHHHHHHHHHHHTT-SEEEE---TH---HHHH
T ss_pred CCcEEEEccCCceeeeeehhHHhcCCCceEEEEEeecCCC-CcHHHHHHHHHHHHHhhhccceEEEEeeCCHH---HHHH
Confidence 4778888 78999999998888888889999999877664 33466677888888888889999999998883 3333
Q ss_pred HHhCCCcEEec
Q 048770 200 YLSKLRYVVSS 210 (243)
Q Consensus 200 Y~~klGF~~~~ 210 (243)
.. .-||...+
T Consensus 131 ~~-a~~~~~~~ 140 (161)
T PF09390_consen 131 AR-AEGFRLGG 140 (161)
T ss_dssp HH-HTT----S
T ss_pred Hh-hcccccCC
Confidence 44 56777554
No 111
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=87.95 E-value=4.6 Score=35.19 Aligned_cols=87 Identities=9% Similarity=0.023 Sum_probs=66.1
Q ss_pred EEeeeCCeEEEEEEEEeeec---CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHc---------CC-CEEEEEEe
Q 048770 124 NFAESKGSIVGFVHFRFCLE---EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKN---------RM-GAVVLTVQ 190 (243)
Q Consensus 124 ~va~~~g~ivG~~~~~~~~~---~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~---------~~-~~i~l~v~ 190 (243)
.++...+.||+.+.+..+.+ ...-++-|..|.|+.=|..-|+=..|++++...+++. |. -.+.+.+.
T Consensus 172 ~IIvYRetPIAiisl~~~~~~St~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~k~~~si~ll~d~Y 251 (304)
T PF11124_consen 172 HIIVYRETPIAIISLVPNKDQSTKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKGKKGCSIKLLVDVY 251 (304)
T ss_pred eEEEEcCCceEEEEeccccccCCCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccccccceEEEEEEee
Confidence 44444578999999876655 3345677899999999999999999999997766551 11 13445667
Q ss_pred cCCHhHHHHHHhCCCcEEecc
Q 048770 191 KANLLAMNFYLSKLRYVVSSI 211 (243)
Q Consensus 191 ~~N~~A~~fY~~klGF~~~~~ 211 (243)
.....-.+..+ +.||.....
T Consensus 252 SFD~~~~k~L~-~~gF~~i~s 271 (304)
T PF11124_consen 252 SFDKDMKKTLK-KKGFKKISS 271 (304)
T ss_pred eccHHHHHHHH-HCCCeeeec
Confidence 77888899999 999999883
No 112
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=87.83 E-value=2.9 Score=37.07 Aligned_cols=23 Identities=22% Similarity=0.317 Sum_probs=20.1
Q ss_pred EEEEEEEcccccCCCHHHHHHHH
Q 048770 150 YVYELQLESRVQGKGLGKFLMQL 172 (243)
Q Consensus 150 ~i~~l~V~~~~rg~GlG~~L~~~ 172 (243)
.|..++++|+||+-|.|+.|-..
T Consensus 119 ElctLfL~p~~R~~~~G~LLSr~ 141 (335)
T TIGR03243 119 ELCTLFLDPDYRKGGNGRLLSRS 141 (335)
T ss_pred eeEEEEECHHHcCCCchhhHHHH
Confidence 47789999999999999998844
No 113
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=87.16 E-value=3.3 Score=36.75 Aligned_cols=24 Identities=8% Similarity=0.227 Sum_probs=20.4
Q ss_pred EEEEEEEEcccccCCCHHHHHHHH
Q 048770 149 LYVYELQLESRVQGKGLGKFLMQL 172 (243)
Q Consensus 149 ~~i~~l~V~~~~rg~GlG~~L~~~ 172 (243)
-.|..++++|+||+-|.|+.|-..
T Consensus 119 sElctLfL~p~~R~~~~G~lLSr~ 142 (336)
T TIGR03245 119 SLLCSFYVDPRLRKTEAAELLSRA 142 (336)
T ss_pred eeeEEEEECHHHcCCCchhHHHHH
Confidence 347789999999999999998844
No 114
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=87.16 E-value=3.4 Score=36.67 Aligned_cols=23 Identities=22% Similarity=0.317 Sum_probs=20.0
Q ss_pred EEEEEEEcccccCCCHHHHHHHH
Q 048770 150 YVYELQLESRVQGKGLGKFLMQL 172 (243)
Q Consensus 150 ~i~~l~V~~~~rg~GlG~~L~~~ 172 (243)
.|..|+++|+||+.|.|+.|-..
T Consensus 119 ElctLfL~p~~R~~~~G~LLSr~ 141 (336)
T TIGR03244 119 ELCTLFLDPDYRKGGNGRLLSKS 141 (336)
T ss_pred eeEEEEECHHHcCCcchhhHHHH
Confidence 47789999999999999988743
No 115
>PRK10456 arginine succinyltransferase; Provisional
Probab=87.14 E-value=3.4 Score=36.76 Aligned_cols=23 Identities=22% Similarity=0.260 Sum_probs=20.0
Q ss_pred EEEEEEEcccccCCCHHHHHHHH
Q 048770 150 YVYELQLESRVQGKGLGKFLMQL 172 (243)
Q Consensus 150 ~i~~l~V~~~~rg~GlG~~L~~~ 172 (243)
.|..|+++|+||+-|.|+.|-..
T Consensus 121 ElctLfl~p~~R~~~~G~LLSr~ 143 (344)
T PRK10456 121 ELCTLFLDPDWRKEGNGYLLSKS 143 (344)
T ss_pred eeEEEEECHHHcCCCchhHHHHH
Confidence 47789999999999999998744
No 116
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=86.85 E-value=5.2 Score=29.53 Aligned_cols=57 Identities=12% Similarity=0.272 Sum_probs=41.7
Q ss_pred cCEEEEEEEEEcccccC-CCHHHHHHHHHHHHHHHcCCCE-EEEEEecCCHhHHHHHHhCCCcE
Q 048770 146 VPVLYVYELQLESRVQG-KGLGKFLMQLIELIARKNRMGA-VVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 146 ~~~~~i~~l~V~~~~rg-~GlG~~L~~~l~~~a~~~~~~~-i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
..+.|+.-+.|.+..|| .|++..+..++.+ ...+ +...+..+|+.-.=||++.-|+-
T Consensus 37 ~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~-----~fp~~L~Wrsr~~n~~n~Wyfers~Gs~ 95 (108)
T cd04266 37 EKIAYLDKFAVLPKAQGSDGIADILFNAMLD-----GFPNELIWRSRKDNPVNKWYFERSVGVL 95 (108)
T ss_pred CCceEEEEEEEccccccccchHHHHHHHHHH-----cCCCceEEEeCCCCcccceEEeeeeEEE
Confidence 56789999999999997 8999999998864 3333 88888888874322334244443
No 117
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=84.39 E-value=4 Score=32.68 Aligned_cols=72 Identities=13% Similarity=0.114 Sum_probs=46.9
Q ss_pred EEEEEEEEee-ecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEE
Q 048770 132 IVGFVHFRFC-LEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVV 208 (243)
Q Consensus 132 ivG~~~~~~~-~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~ 208 (243)
.-|.+.+... +.....+.|+.-+.|.+..||.|++..+..++.. ..+ .+...+..+|+.-.=|+++.-|+-.
T Consensus 71 y~~~AIVt~e~~~~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~~---d~p--~L~Wrsr~~n~~~~Wyf~rs~G~~~ 143 (170)
T PF04768_consen 71 YEGAAIVTPEGPDSNGPVPYLDKFAVSKSAQGSGVADNVFNAIRK---DFP--KLFWRSREDNPNNKWYFERSDGSFK 143 (170)
T ss_dssp SSEEEEEEEE-SCTCTSEEEEEEEEE-HHHHHTTHHHHHHHHHHH---H-S--SEEEEEETT-TTHHHHHHH-SEEEE
T ss_pred ceEEEEEEecCCCCCCCCeEEEEEEecchhhhcCHHHHHHHHHHH---hcc--ceEEEecCCCCcccEEEEeeEEEEE
Confidence 3344444332 2345578999999999999999999999999842 233 3888999988744334453566554
No 118
>PHA01733 hypothetical protein
Probab=83.87 E-value=1.5 Score=34.30 Aligned_cols=84 Identities=17% Similarity=0.160 Sum_probs=50.2
Q ss_pred EEeeeCCeEEEEEEEEeeecCCc-CEEEEEEEEEcccccCCCHHHHHHHHHHHHHH-HcCCCEEEEEEecCCHhHHHHHH
Q 048770 124 NFAESKGSIVGFVHFRFCLEEDV-PVLYVYELQLESRVQGKGLGKFLMQLIELIAR-KNRMGAVVLTVQKANLLAMNFYL 201 (243)
Q Consensus 124 ~va~~~g~ivG~~~~~~~~~~~~-~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~-~~~~~~i~l~v~~~N~~A~~fY~ 201 (243)
+....+|.++|+.....+..++. ..+.+..-+|. .++ +..+.....+.. ......++-.|...|..+++|.+
T Consensus 50 ~~~~~nG~l~aI~Gv~~d~~~~vG~pWlV~T~~v~-k~~-----~~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir~Lk 123 (153)
T PHA01733 50 AFVAPDGSLAGVAGLVEDMGNRVGEIWMVCTPAIE-KNP-----IALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRKLLR 123 (153)
T ss_pred EEEecCCcEEEEecccccccCCCCceeEEecHHhH-hCC-----HHHHHHHHHHHHHhccccHHHHhHhcccHHHHHHHH
Confidence 44445799999888754322222 22223222222 233 222222222222 44666778889999999999999
Q ss_pred hCCCcEEeccCCC
Q 048770 202 SKLRYVVSSISPS 214 (243)
Q Consensus 202 ~klGF~~~~~~p~ 214 (243)
.+||+.....|-
T Consensus 124 -~lGF~f~~~~~~ 135 (153)
T PHA01733 124 -KLGFKGLRYVQP 135 (153)
T ss_pred -HcCceeeccccc
Confidence 999999886664
No 119
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=83.82 E-value=0.69 Score=40.84 Aligned_cols=45 Identities=22% Similarity=0.320 Sum_probs=29.8
Q ss_pred eEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHH
Q 048770 131 SIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIAR 178 (243)
Q Consensus 131 ~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~ 178 (243)
++|||.+=--....+. -+..|-+.|.||++|+|+.|++.--...+
T Consensus 248 h~vGyFSKEK~S~~~y---NLaCILtLP~yQRrGYG~lLIdFSY~Ls~ 292 (395)
T COG5027 248 HLVGYFSKEKESEQDY---NLACILTLPPYQRRGYGKLLIDFSYLLSQ 292 (395)
T ss_pred eeeeeechhhcccccC---ceEEEEecChhHhcccceEeeeeeeeccc
Confidence 4778754221122222 36778899999999999999976544444
No 120
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=83.25 E-value=3.8 Score=29.49 Aligned_cols=25 Identities=12% Similarity=0.057 Sum_probs=20.8
Q ss_pred cCEEEEEEEEEcccccCCCHHHHHH
Q 048770 146 VPVLYVYELQLESRVQGKGLGKFLM 170 (243)
Q Consensus 146 ~~~~~i~~l~V~~~~rg~GlG~~L~ 170 (243)
..++.+..+.|+|+||+......|+
T Consensus 76 ~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 76 RRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred CcEEEeehheECHhHCCChHHHHHh
Confidence 3677889999999999988877664
No 121
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=79.88 E-value=19 Score=34.19 Aligned_cols=60 Identities=15% Similarity=0.165 Sum_probs=44.8
Q ss_pred eCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEe
Q 048770 128 SKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQ 190 (243)
Q Consensus 128 ~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~ 190 (243)
.+|+++||+.+..... ..-+-++-+--+|+.= +|+-..|+..+..++++.|++.+.+...
T Consensus 400 ~~g~VvaFa~l~~~~~--~~~~SlDlMR~sp~ap-~g~mdfLf~~li~~aKe~G~~~fsLgmA 459 (538)
T COG2898 400 NEGEVVAFANLMPTGG--KEGYSLDLMRRSPDAP-NGTMDFLFSELILWAKEEGYQRFSLGMA 459 (538)
T ss_pred CCCCeEEEEeecccCC--cceeEEEeeecCCCCC-chHHHHHHHHHHHHHHHcCCeEEecCCc
Confidence 3688999999865432 2234455555566654 7999999999999999999999988543
No 122
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=79.20 E-value=23 Score=36.69 Aligned_cols=59 Identities=14% Similarity=0.155 Sum_probs=45.2
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEec
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQK 191 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~ 191 (243)
+|+++||+.+..... ..+.++-+--+|+. =.|+--.|+..+..++++.|++.+.|...+
T Consensus 429 ~G~i~af~s~~p~~~---~g~slDLMRr~pda-pnGvmE~L~~~l~~~~k~~G~~~~sLg~AP 487 (1094)
T PRK02983 429 DGQVVALLSFVPWGR---RGLSLDLMRRSPDA-PNGVIELMVAELALEAESLGITRISLNFAV 487 (1094)
T ss_pred CCeEEEEEEEeeeCC---CCEEEEecccCCCC-CCCHHHHHHHHHHHHHHHcCCCEEEechhh
Confidence 699999999976322 22444444445664 689999999999999999999999986654
No 123
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=77.61 E-value=9.9 Score=33.40 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=65.0
Q ss_pred CCCCHHHHHHHHHHHHhhhh-hhhcC-CCCchhHhhHhhhccCCc--ceEEEEecCCCCcCcccccceEEeeeCCeEEEE
Q 048770 60 DKLSSAEKQYILNLLKANME-GPYGS-EWPAEEKVKRREMVASEA--RYIFARELDAPSASASEMSKTNFAESKGSIVGF 135 (243)
Q Consensus 60 ~~l~~~~~~~i~~L~~~nm~-~~y~~-~w~~~~~~k~~el~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~ 135 (243)
+-.+...++.++.|+.+|.- +.|.. -+.+.-..-+..+..|.. +|.+...-. ...++|||
T Consensus 85 dv~N~~ql~dv~~lL~eNYVED~~ag~rf~Y~~EFl~Wal~~pg~kK~whigvRvk----------------~t~klVaF 148 (451)
T COG5092 85 DVANKKQLEDVFVLLEENYVEDIYAGHRFRYSVEFLQWALDGPGGKKRWHIGVRVK----------------GTQKLVAF 148 (451)
T ss_pred eccccchhHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHhhcCCCCceeeEEEEEEc----------------ccceeEEE
Confidence 34456677888889888863 34422 222222222222333332 233333221 13589999
Q ss_pred EEEEee----ecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCC
Q 048770 136 VHFRFC----LEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRM 182 (243)
Q Consensus 136 ~~~~~~----~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~ 182 (243)
+..... ......++.+.-+.|+.+.|++-+.--|+..+...|...|+
T Consensus 149 Isa~p~~v~vRgK~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~~~i 199 (451)
T COG5092 149 ISAKPHLVSVRGKRSSVLEVNFLCIHKELRSKRLTPVLIKEITRRANVDGI 199 (451)
T ss_pred EecceeEEEEcccccccceEEEEEEehhhhhCccchHHHHHHHHhhhhhhh
Confidence 865322 22445678899999999999999999999999888766543
No 124
>KOG3698 consensus Hyaluronoglucosaminidase [Posttranslational modification, protein turnover, chaperones]
Probab=77.04 E-value=4.6 Score=38.27 Aligned_cols=70 Identities=16% Similarity=0.193 Sum_probs=57.0
Q ss_pred EEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEeccCCCCCCCCCCCcceEEEEeeec
Q 048770 154 LQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSISPSRVDPFTGVEKSYEILCKVF 233 (243)
Q Consensus 154 l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~~~~~~~g~~~~y~il~k~l 233 (243)
.++..+.---|+.+.+|+.+..-.+.+|.....++|..+..+-++||. ++||...+.+.. ..+.||...|
T Consensus 822 ~~~~~~a~D~~~~k~m~~vll~tL~aNGsrGaf~~V~~dD~~~~~fys-~lG~~d~~~~e~---------~~~~i~Gr~l 891 (891)
T KOG3698|consen 822 TYFGMDASDAHPMKKMIQVLLVTLAANGSRGAFLTVAIDDIERQKFYS-ELGLTDLGLSEC---------QRFRIFGRTL 891 (891)
T ss_pred hccccccccchHHHHHHHHHHHHHHhcCCcceeEEechhHHHHHHHHH-HhchHHHhHhhc---------ceEEEecccC
Confidence 345555667899999999999999999999999999999999999999 999988775442 2567776543
No 125
>PF11039 DUF2824: Protein of unknown function (DUF2824); InterPro: IPR022568 This family of proteins has no known function. Members of the family are found in P22-like viruses and bacteria. Some of the phage members have been annotated as head assembly proteins, but this has not been confirmed.
Probab=74.57 E-value=36 Score=26.05 Aligned_cols=87 Identities=11% Similarity=-0.031 Sum_probs=53.0
Q ss_pred EEeeeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHc-CCCEEEEEEecCCHhHHHHHHh
Q 048770 124 NFAESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKN-RMGAVVLTVQKANLLAMNFYLS 202 (243)
Q Consensus 124 ~va~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~-~~~~i~l~v~~~N~~A~~fY~~ 202 (243)
+.+++.+.++|++.++..... ++.|..++ +|++|| +....-.....+.-++ ....+.--|...-.-.+-..+
T Consensus 41 ~gVyeg~~l~Gi~~v~~i~~~---~vecHa~y-~P~fRG--~a~~~~~~F~kwlL~Ns~f~~vit~vp~kt~~Grvic~- 113 (151)
T PF11039_consen 41 LGVYEGGQLGGIVYVEEIQPS---VVECHAMY-DPGFRG--YALEIGRLFCKWLLENSPFQNVITFVPDKTRYGRVICR- 113 (151)
T ss_pred EEEEeceEEEEEEEEEEEeee---eEEEEeee-ccccch--hHHHHHHHHHHHHhcCCceeEEEEecccccccchhHhh-
Confidence 444457899999988765432 45565555 799999 6666555555555454 443333333222222334455
Q ss_pred CCCcEEeccCCCCCC
Q 048770 203 KLRYVVSSISPSRVD 217 (243)
Q Consensus 203 klGF~~~~~~p~~~~ 217 (243)
=+|.+.+|+..+...
T Consensus 114 llg~~RVG~id~~~~ 128 (151)
T PF11039_consen 114 LLGARRVGHIDDYFK 128 (151)
T ss_pred hhCCceeeeHHHHhc
Confidence 789999998777543
No 126
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=73.82 E-value=24 Score=24.87 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEec
Q 048770 165 LGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSS 210 (243)
Q Consensus 165 lG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~ 210 (243)
.-+.+...+....+. ...++=.|...|..+++|.+ .+|++...
T Consensus 41 F~k~i~~~~d~~l~~--Y~~l~N~V~~~N~~HIRfLk-~lGA~f~~ 83 (86)
T PF11090_consen 41 FRKLIKEYLDKMLKQ--YPVLWNFVWVGNKSHIRFLK-SLGAVFHN 83 (86)
T ss_pred HHHHHHHHHHHHHHH--hhheeEEEEeCCHHHHHHHH-hcCcEEcc
Confidence 344444444444333 55688899999999999999 99998654
No 127
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=72.28 E-value=5.7 Score=35.73 Aligned_cols=75 Identities=13% Similarity=0.255 Sum_probs=48.5
Q ss_pred CeEEEEEEEEeeecCCcCEEEEEEEEEcccccC-CCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHH-HhCCCcE
Q 048770 130 GSIVGFVHFRFCLEEDVPVLYVYELQLESRVQG-KGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFY-LSKLRYV 207 (243)
Q Consensus 130 g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg-~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY-~~klGF~ 207 (243)
|.--|.+.+.........+.|+..++|.++.|| -|||..+...+.+..- ..+......+|. +-+|| +++-|+-
T Consensus 382 gdY~g~aIlTyegs~~~~vpYLDKfAVl~~aQGs~gisd~vfniM~e~fP----~eL~WRSR~~N~-vNkwYf~rSvg~l 456 (495)
T COG5630 382 GDYRGAAILTYEGSGENNVPYLDKFAVLDDAQGSEGISDAVFNIMREEFP----NELFWRSRHNNQ-VNKWYFARSVGYL 456 (495)
T ss_pred ccceeeEEEEeeccCCCCCcceeeeeccccccccchHHHHHHHHHHHhCc----HhhhhhhcccCc-chheeeehhhehh
Confidence 334566655545445567889999999999999 9999999887754432 234455555565 33444 3355554
Q ss_pred Ee
Q 048770 208 VS 209 (243)
Q Consensus 208 ~~ 209 (243)
..
T Consensus 457 k~ 458 (495)
T COG5630 457 KQ 458 (495)
T ss_pred hc
Confidence 43
No 128
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=70.76 E-value=40 Score=29.07 Aligned_cols=65 Identities=15% Similarity=0.075 Sum_probs=38.0
Q ss_pred eEEeee-CCeEEEEEEEEeeecCCcCEEEEEEEEE-cccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEec
Q 048770 123 TNFAES-KGSIVGFVHFRFCLEEDVPVLYVYELQL-ESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQK 191 (243)
Q Consensus 123 ~~va~~-~g~ivG~~~~~~~~~~~~~~~~i~~l~V-~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~ 191 (243)
++++.. +|+++||+.+..... .. .++.++.- +++ -=+|+-..|+..+...+++.|++.|.|...+
T Consensus 182 ~~~~~~~dgki~af~~~~~~~~--~~-~~~~~~~k~~~~-a~~G~~e~l~~~~~~~~~~~g~~~lnLg~ap 248 (299)
T PF09924_consen 182 GFVARVADGKIVAFAIGSPLGG--RD-GWSIDFEKADPD-APKGIYEFLNVEFAEHLKAEGVEYLNLGFAP 248 (299)
T ss_dssp EEEEEE-TTEEEEEEEEEEEE---TT-EEEEEEEEE-TT--STTHHHHHHHHHHHHS--TT--EEE-----
T ss_pred EEEEEECCCcEEEEEEEEEccC--Cc-cEEEEEEecCCC-CCCcHHHHHHHHHHHhhhhCCceEEEccccc
Confidence 344444 799999999875552 22 34444443 333 4589999999999999988899988865443
No 129
>KOG4387 consensus Ornithine decarboxylase antizyme [Amino acid transport and metabolism]
Probab=70.46 E-value=39 Score=27.21 Aligned_cols=80 Identities=10% Similarity=0.008 Sum_probs=49.9
Q ss_pred EEEcccccC-CCHHHHHHHHHHHHHHHc-CCCEEEEEEecCCHhH---HHHHHhCCCcEEeccCCCCCCCCCCCcceEEE
Q 048770 154 LQLESRVQG-KGLGKFLMQLIELIARKN-RMGAVVLTVQKANLLA---MNFYLSKLRYVVSSISPSRVDPFTGVEKSYEI 228 (243)
Q Consensus 154 l~V~~~~rg-~GlG~~L~~~l~~~a~~~-~~~~i~l~v~~~N~~A---~~fY~~klGF~~~~~~p~~~~~~~g~~~~y~i 228 (243)
+++.+..|= -+.-+.=+-+++++|.+. .+.+|.+...+++..- .+-+. -+||++......... ..-+|.+
T Consensus 104 l~~~IPdq~l~~gsKe~lvalLEfAEekl~~d~Vfi~F~K~R~dr~~Llrtfs-yvGFEpvrp~HP~~p----p~~~~ff 178 (191)
T KOG4387|consen 104 LFFEIPDQALDVGSKEGLVALLEFAEEKLHVDKVFICFDKNREDRAALLRTFS-YVGFEPVRPDHPVVP----PRPDVFF 178 (191)
T ss_pred EEEecCcchhcccchHhHHHHHHHHHHhhccceEEEEEecCccChHhhhhheh-cceeeecCCCCCCCC----CccceEE
Confidence 334443333 334444555566666554 9999999999875322 34455 789988875422222 2458999
Q ss_pred EeeecCccch
Q 048770 229 LCKVFDNESK 238 (243)
Q Consensus 229 l~k~l~~~~~ 238 (243)
|+.+++.+..
T Consensus 179 M~Y~~er~~~ 188 (191)
T KOG4387|consen 179 MVYPLERDVS 188 (191)
T ss_pred EEEeeccccc
Confidence 9999988743
No 130
>PRK15312 antimicrobial resistance protein Mig-14; Provisional
Probab=65.30 E-value=14 Score=32.18 Aligned_cols=100 Identities=11% Similarity=0.010 Sum_probs=57.4
Q ss_pred cCCCCCHHHHHHHHHHHHhhhhhhhcCCCCchh----HhhHhhhccCCcceEEEEecCCCCcCcccccceEEeeeCCeEE
Q 048770 58 CGDKLSSAEKQYILNLLKANMEGPYGSEWPAEE----KVKRREMVASEARYIFARELDAPSASASEMSKTNFAESKGSIV 133 (243)
Q Consensus 58 ~~~~l~~~~~~~i~~L~~~nm~~~y~~~w~~~~----~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~iv 133 (243)
..++++++++..|+. ++|..-|+... .....++...-...+ ...|...+|+|+
T Consensus 159 ~is~fS~~Ela~iY~-------~Lf~~Rwg~~~~~~~~~~l~e~f~~Lr~l~----------------fG~VLfl~~~Pc 215 (298)
T PRK15312 159 SVADCSSDELTHIFI-------ELFRSRFGNTLSCYPADNLANFFSQLRHLL----------------FGHILYIEGIPC 215 (298)
T ss_pred EhHHCCHHHHHHHHH-------HHHHHHhCCCCCcccHHHHHHHHHHhHHhh----------------eeeEEEECCcce
Confidence 456889999988884 34544565322 222233322211111 223455679999
Q ss_pred EEEEEEeeecCCcCEEEE--EEEEEcccccCCCHHHHHH----HHHHHHHHHcCC
Q 048770 134 GFVHFRFCLEEDVPVLYV--YELQLESRVQGKGLGKFLM----QLIELIARKNRM 182 (243)
Q Consensus 134 G~~~~~~~~~~~~~~~~i--~~l~V~~~~rg~GlG~~L~----~~l~~~a~~~~~ 182 (243)
|+-.+.-... ...+++ ....++|++...-+|+-|| +.+...|+..+.
T Consensus 216 A~qlv~k~eS--p~wi~~D~iNgG~Dpe~~~~spGSIL~WlNi~~A~~~~~~~~K 268 (298)
T PRK15312 216 AFDIVLKSES--QMNVYFDVPNGAVKNECMPLSPGSILMWLNISRARHYCQERQK 268 (298)
T ss_pred EEEEEEEecC--CCcEEEecccCccCcccccCCCccEEEEecHHHHHHHHHhcCC
Confidence 9865532221 122232 3567999999999999887 556666665553
No 131
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood [].
Probab=63.60 E-value=14 Score=31.61 Aligned_cols=100 Identities=15% Similarity=0.058 Sum_probs=57.7
Q ss_pred cCCCCCHHHHHHHHHHHHhhhhhhhcCCCCch--hHhhHhhhccCCcceEEEEecCCCCcCcccccceEEeeeCCeEEEE
Q 048770 58 CGDKLSSAEKQYILNLLKANMEGPYGSEWPAE--EKVKRREMVASEARYIFARELDAPSASASEMSKTNFAESKGSIVGF 135 (243)
Q Consensus 58 ~~~~l~~~~~~~i~~L~~~nm~~~y~~~w~~~--~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~ 135 (243)
..+++|++++..|+. ++|..-|+.. ......++...-..++ ...|...+|+||++
T Consensus 131 ~v~~~S~~Ela~iY~-------~Lf~~Rwg~~~~~~~~l~e~f~~Lr~~~----------------fG~vL~l~~~P~Ai 187 (264)
T PF07395_consen 131 PVSEFSPEELADIYI-------DLFQKRWGFRCYGKEHLAEFFSELRHMI----------------FGSVLFLNGQPCAI 187 (264)
T ss_pred EHHHCCHHHHHHHHH-------HHHHHHhCCCCCcHHHHHHHHHHhHHhh----------------eeeEEEECCcceEE
Confidence 456889999988884 3444445521 1111222222111111 22345557999998
Q ss_pred EEEEeeecCCcCEEEEE--EEEEcccccCCCHHHHHH----HHHHHHHHHcCC
Q 048770 136 VHFRFCLEEDVPVLYVY--ELQLESRVQGKGLGKFLM----QLIELIARKNRM 182 (243)
Q Consensus 136 ~~~~~~~~~~~~~~~i~--~l~V~~~~rg~GlG~~L~----~~l~~~a~~~~~ 182 (243)
-.+.-. + ....+++. ...++|+++..-.|+-|| +.+.+.|++.|.
T Consensus 188 qlv~k~-e-s~~wv~~D~iNgG~Dp~~~~~SpGSiL~w~Ni~~A~~~~~~~~k 238 (264)
T PF07395_consen 188 QLVYKV-E-SPKWVYFDYINGGYDPECRDFSPGSILMWLNIQDAWEYCRAQGK 238 (264)
T ss_pred EEEEEe-c-CCCeEEEecccCccCcccccCCCccEEEEeeHHHHHHHHHHhCC
Confidence 654322 2 22233333 457899999999999987 666667766654
No 132
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=62.45 E-value=1e+02 Score=27.80 Aligned_cols=121 Identities=15% Similarity=0.186 Sum_probs=65.7
Q ss_pred CCCHHHHHHHHHHHHhhhhhhhcC-CCCchhHhhHhhhccCCcceEEEEecCCCCcCcccccceEEeee-CCeEEEEEEE
Q 048770 61 KLSSAEKQYILNLLKANMEGPYGS-EWPAEEKVKRREMVASEARYIFARELDAPSASASEMSKTNFAES-KGSIVGFVHF 138 (243)
Q Consensus 61 ~l~~~~~~~i~~L~~~nm~~~y~~-~w~~~~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~-~g~ivG~~~~ 138 (243)
.+.+.|++.++.|+...+...--. .+.. ++..-.-+.....-| +||++. +|.|-+|++|
T Consensus 265 ~me~kDvp~V~~Ll~~yl~qf~la~~f~~-eev~Hwf~p~e~VV~------------------syVvesp~g~ITDF~SF 325 (421)
T KOG2779|consen 265 EMEEKDVPAVFRLLRNYLKQFELAPVFDE-EEVEHWFLPRENVVY------------------SYVVESPNGKITDFCSF 325 (421)
T ss_pred cccccchHHHHHHHHHHHHheecccccCH-HHhHhhcccccceEE------------------EEEEECCCCcccceeeE
Confidence 477889999999998766432211 2322 111101011112222 234433 7889999987
Q ss_pred Eeeec--------CCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEe
Q 048770 139 RFCLE--------EDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVS 209 (243)
Q Consensus 139 ~~~~~--------~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~ 209 (243)
...+. .....+|++.- |..+ --=..||.-++-.|+..|++-......-+|. .|+. .++|-.-
T Consensus 326 y~lpsTv~~~~~~ktl~aaYlyY~-v~~~----t~~~~lvnDalilak~~gfDVFNAld~meN~---~fl~-~LkFg~G 395 (421)
T KOG2779|consen 326 YSLPSTVMGNPKYKTLQAAYLYYN-VATS----TPLLQLVNDALILAKQKGFDVFNALDLMENE---SFLK-DLKFGPG 395 (421)
T ss_pred EeccccccCCCCcceeeeeeEEEe-ccCC----ccHHHHHHHHHHHHHhcCCceeehhhhhhhh---hHHH-hcCcCcC
Confidence 54332 11122233211 1111 1134567667777888899877765556676 7888 9999754
No 133
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=59.45 E-value=40 Score=28.65 Aligned_cols=62 Identities=15% Similarity=0.105 Sum_probs=46.3
Q ss_pred CCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCH
Q 048770 129 KGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANL 194 (243)
Q Consensus 129 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~ 194 (243)
.|++|+.+..-.-.+ +... + ..+-+|++...++|+..+-.=+.+|++.|...++|.-...+-
T Consensus 159 ~G~LvAVavtDvL~d-GlSs--V-Y~FydPd~s~~SLGt~~iL~~I~~aq~~~l~yvYLGYwI~~c 220 (253)
T COG2935 159 EGKLVAVAVTDVLPD-GLSS--V-YTFYDPDMSKRSLGTLSILDQIAIAQRLGLPYVYLGYWIKGC 220 (253)
T ss_pred CCcEEEEEeeecccC-ccee--E-EEEeCCChhhhcchHHHHHHHHHHHHHhCCCeEEEEEEECCc
Confidence 589998877643332 2221 2 234599999999999988777788999999999998777654
No 134
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=58.31 E-value=19 Score=31.28 Aligned_cols=20 Identities=25% Similarity=0.395 Sum_probs=16.9
Q ss_pred EEEEEEcccccCCCHHHHHH
Q 048770 151 VYELQLESRVQGKGLGKFLM 170 (243)
Q Consensus 151 i~~l~V~~~~rg~GlG~~L~ 170 (243)
+..++++|++|.-|.|+.|-
T Consensus 122 l~sLFl~pd~Rkg~nG~Lls 141 (336)
T COG3138 122 LCTLFLDPDWRKGGNGRLLS 141 (336)
T ss_pred hhheeecHHHhcccchhhhh
Confidence 56789999999999888765
No 135
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=58.10 E-value=1e+02 Score=25.14 Aligned_cols=122 Identities=16% Similarity=0.196 Sum_probs=69.0
Q ss_pred CCCHHHHHHHHHHHHhhhhhhhcC--CCCchhHhhHhhhccCCcceEEEEecCCCCcCcccccceEEeeeCCeEEEEEEE
Q 048770 61 KLSSAEKQYILNLLKANMEGPYGS--EWPAEEKVKRREMVASEARYIFARELDAPSASASEMSKTNFAESKGSIVGFVHF 138 (243)
Q Consensus 61 ~l~~~~~~~i~~L~~~nm~~~y~~--~w~~~~~~k~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~ 138 (243)
.+.+.|++.+..|+...++. |.- .+. ++..+-.=+..++.-|..+.+.+ +|+|-.|++|
T Consensus 33 ~m~~~Dv~~v~~Ll~~yl~~-f~l~~~fs-~eev~Hw~lp~~~Vv~syVve~~-----------------~~~ITDf~SF 93 (190)
T PF02799_consen 33 PMEEKDVPQVTKLLNKYLKK-FDLAPVFS-EEEVKHWFLPRKNVVYSYVVEDP-----------------DGKITDFFSF 93 (190)
T ss_dssp E--GGGHHHHHHHHHHHHTT-SSEEEE---HHHHHHHHS-BTTTEEEEEEEET-----------------TSEEEEEEEE
T ss_pred cCchhhHHHHHHHHHHHHHh-cccccccC-HHHHHhhcccCCCeEEEEEEecC-----------------CCceeeEEEE
Confidence 45688999999999887764 321 232 22222111222333333333332 4689999887
Q ss_pred Eeeec----C----CcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEec
Q 048770 139 RFCLE----E----DVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSS 210 (243)
Q Consensus 139 ~~~~~----~----~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~ 210 (243)
-.-+. . ....+|++.-.-. . ==-+.||+-++-.|++.|++-...-..-+|. .|.+ .++|..-.
T Consensus 94 Y~Lpstvi~~~k~~~l~aAY~fY~~~~-~----~~l~~Lm~DaLi~Ak~~gfDVFNaLd~mdN~---~fL~-~lKFg~Gd 164 (190)
T PF02799_consen 94 YSLPSTVIGNPKHKTLKAAYSFYYVAT-S----TRLKELMNDALILAKNEGFDVFNALDLMDNS---SFLE-DLKFGPGD 164 (190)
T ss_dssp EEEEEEESSSSSSSEEEEEEEEEEEES-S----SHHHHHHHHHHHHHHHTTESEEEEESTTTGG---GTTT-TTT-EEEE
T ss_pred eecceeecCCCCccceeeeeeeeeeec-C----CCHHHHHHHHHHHHHHcCCCEEehhhhccch---hhHh-hCCccCCC
Confidence 54332 1 1223343322222 1 2245788888889999999977776666787 7888 99998643
No 136
>cd07235 MRD Mitomycin C resistance protein (MRD). Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.
Probab=57.42 E-value=12 Score=27.10 Aligned_cols=27 Identities=22% Similarity=0.368 Sum_probs=19.8
Q ss_pred CEEEEEEecCCHhHHHHHHhCCCcEEecc
Q 048770 183 GAVVLTVQKANLLAMNFYLSKLRYVVSSI 211 (243)
Q Consensus 183 ~~i~l~v~~~N~~A~~fY~~klGF~~~~~ 211 (243)
..|.|.|..- .+|++||+ ++||+....
T Consensus 2 ~~i~l~V~D~-~~a~~FY~-~LGf~~~~~ 28 (122)
T cd07235 2 DAVGIVVADM-AKSLDFYR-RLGFDFPEE 28 (122)
T ss_pred ceEEEEeccH-HHHHHHHH-HhCceecCC
Confidence 4567777554 46999999 899987543
No 137
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=56.31 E-value=74 Score=22.97 Aligned_cols=49 Identities=10% Similarity=0.220 Sum_probs=38.6
Q ss_pred cCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHH
Q 048770 146 VPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFY 200 (243)
Q Consensus 146 ~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY 200 (243)
..+.|+.-+.|.+..++.|++..+...+.+- ...+...+..+|+.- ++|
T Consensus 31 ~~v~~LdkFav~~~~~~~gv~D~vf~~i~~d-----~~~L~Wrsr~~n~~n-~Wy 79 (98)
T cd03173 31 NSIPYLDKFAVSDHLWLNNVTDNIFNLIRKD-----FPSLLWRVRENDANL-KWY 79 (98)
T ss_pred CCCEEEEEEEEcccccccCHHHHHHHHHHhh-----CCeeEEEeCCCCCcc-ceE
Confidence 4567999999999999999999999887532 347888888888633 444
No 138
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=52.76 E-value=1.2e+02 Score=24.41 Aligned_cols=49 Identities=14% Similarity=0.276 Sum_probs=40.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEeccCCC
Q 048770 162 GKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSISPS 214 (243)
Q Consensus 162 g~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~ 214 (243)
+.|.++.|+..+.......|++-+..|... .-.+.+. ++|.......+-
T Consensus 97 ~~g~~~~l~~~l~~~L~~~g~~w~vfTaT~---~lr~~~~-rlgl~~~~La~A 145 (179)
T PF12261_consen 97 SPGAARLLFAALAQLLAQQGFEWVVFTATR---QLRNLFR-RLGLPPTVLADA 145 (179)
T ss_pred CcccHHHHHHHHHHHHHHCCCCEEEEeCCH---HHHHHHH-HcCCCceecccc
Confidence 689999999999999999999877766544 6788999 999987765444
No 139
>PRK13740 conjugal transfer protein TraY; Provisional
Probab=49.21 E-value=5.1 Score=26.90 Aligned_cols=15 Identities=40% Similarity=0.727 Sum_probs=12.3
Q ss_pred HhhcccccccCcccc
Q 048770 29 ASAHKDHLTAFPSFR 43 (243)
Q Consensus 29 a~~~~~~l~~~~~~~ 43 (243)
+-+++|+|..||+|-
T Consensus 42 ~lRL~DHL~rFpDfy 56 (70)
T PRK13740 42 QIRLRDHLKRFPDFY 56 (70)
T ss_pred HHHHHHHHHhCcccc
Confidence 456789999999984
No 140
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=48.56 E-value=34 Score=27.49 Aligned_cols=84 Identities=12% Similarity=0.043 Sum_probs=54.5
Q ss_pred CEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCC---Cc-------EEeccCCCCC
Q 048770 147 PVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKL---RY-------VVSSISPSRV 216 (243)
Q Consensus 147 ~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~kl---GF-------~~~~~~p~~~ 216 (243)
-+..+.-..|.|+.+|.||+..| ..+.-..++.++.--..+|.. +..+.++ ++ |. ++..+.|+..
T Consensus 84 LVaElGLygVRpDLEGlGi~hs~-r~m~PvLq~LgVPF~FGtVR~---al~~Hv~-R~~R~gl~ti~~gvrVRSTlpdv~ 158 (196)
T PF02474_consen 84 LVAELGLYGVRPDLEGLGISHSM-RVMYPVLQELGVPFGFGTVRH---ALRNHVE-RLCRNGLATILSGVRVRSTLPDVY 158 (196)
T ss_pred eEEEEEEEEeeccccccccchhh-hhhhhHHHhcCCCeecccchH---HHHHHHH-HHhccchhhcccCceeeccCcccc
Confidence 35566777899999999999965 577777788899888888876 4445555 44 33 5556666653
Q ss_pred CCC-CCCcceEEEEeeecCc
Q 048770 217 DPF-TGVEKSYEILCKVFDN 235 (243)
Q Consensus 217 ~~~-~g~~~~y~il~k~l~~ 235 (243)
-.. .-.-.+..++..++..
T Consensus 159 ~dlppTr~ed~lv~V~Pi~r 178 (196)
T PF02474_consen 159 LDLPPTRIEDVLVVVLPIGR 178 (196)
T ss_pred CCCCCcccccceEEEEcCCC
Confidence 211 1222344555566543
No 141
>KOG3014 consensus Protein involved in establishing cohesion between sister chromatids during DNA replication [Replication, recombination and repair]
Probab=45.31 E-value=55 Score=27.83 Aligned_cols=31 Identities=13% Similarity=0.199 Sum_probs=26.1
Q ss_pred cCEEEEEEEEEcccccCCCHHHHHHHHHHHH
Q 048770 146 VPVLYVYELQLESRVQGKGLGKFLMQLIELI 176 (243)
Q Consensus 146 ~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~ 176 (243)
..++-|..|.|.+..|++|+++.|+..+...
T Consensus 181 ~~~~GIsRIWV~s~~Rr~gIAs~lldva~~~ 211 (257)
T KOG3014|consen 181 PAICGISRIWVSSLRRRKGIASLLLDVARCN 211 (257)
T ss_pred CcEeeeEEEEeehhhhhhhhHHHHHHHHHHh
Confidence 4566789999999999999999999877543
No 142
>PF04816 DUF633: Family of unknown function (DUF633) ; InterPro: IPR006901 This is a family of uncharacterised bacterial proteins.; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity; PDB: 3LEC_A 3KU1_G 3KR9_A 3GNL_B.
Probab=44.40 E-value=20 Score=29.53 Aligned_cols=68 Identities=13% Similarity=0.138 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHHHHHHc--CCCEEEEEEecCCHhHHHHHHhCCCcEEeccCCCCCCCCCCCcceEEEEeeecCcc
Q 048770 163 KGLGKFLMQLIELIARKN--RMGAVVLTVQKANLLAMNFYLSKLRYVVSSISPSRVDPFTGVEKSYEILCKVFDNE 236 (243)
Q Consensus 163 ~GlG~~L~~~l~~~a~~~--~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~~~~~~~g~~~~y~il~k~l~~~ 236 (243)
-|+|..++..+++..... ....+.|........-+++.. .+||.+.....-..+ ..-|+||.-....+
T Consensus 73 AGMGG~lI~~ILe~~~~~~~~~~~lILqP~~~~~~LR~~L~-~~gf~I~~E~lv~e~-----~~~YeIi~~~~~~~ 142 (205)
T PF04816_consen 73 AGMGGELIIEILEAGPEKLSSAKRLILQPNTHAYELRRWLY-ENGFEIIDEDLVEEN-----GRFYEIIVAERGEE 142 (205)
T ss_dssp EEE-HHHHHHHHHHTGGGGTT--EEEEEESS-HHHHHHHHH-HTTEEEEEEEEEEET-----TEEEEEEEEEESSS
T ss_pred ecCCHHHHHHHHHhhHHHhccCCeEEEeCCCChHHHHHHHH-HCCCEEEEeEEEeEC-----CEEEEEEEEEeCCC
Confidence 477888886666655433 556777776665566667777 999999885443222 34788887655443
No 143
>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=43.91 E-value=19 Score=26.79 Aligned_cols=29 Identities=28% Similarity=0.402 Sum_probs=21.5
Q ss_pred CCCEEEEEEecCCHhHHHHHHhCCCcEEecc
Q 048770 181 RMGAVVLTVQKANLLAMNFYLSKLRYVVSSI 211 (243)
Q Consensus 181 ~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~ 211 (243)
+++.|.+.|..- ..|++||+ ++||+....
T Consensus 3 ~i~Hi~i~v~Dl-~~s~~FY~-~LG~~~~~~ 31 (142)
T cd08353 3 RMDNVGIVVRDL-EAAIAFFL-ELGLELEGR 31 (142)
T ss_pred eeeeEEEEeCCH-HHHHHHHH-HcCCEEccc
Confidence 456677777654 46899999 899987654
No 144
>COG2384 Predicted SAM-dependent methyltransferase [General function prediction only]
Probab=39.40 E-value=74 Score=26.64 Aligned_cols=66 Identities=17% Similarity=0.155 Sum_probs=42.4
Q ss_pred CCHHHHHHHHHHHHHHHc--CCCEEEEEEecCCHhHHHHHHhCCCcEEeccCCCCCCCCCCCcceEEEEeeecC
Q 048770 163 KGLGKFLMQLIELIARKN--RMGAVVLTVQKANLLAMNFYLSKLRYVVSSISPSRVDPFTGVEKSYEILCKVFD 234 (243)
Q Consensus 163 ~GlG~~L~~~l~~~a~~~--~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~~~~~~~g~~~~y~il~k~l~ 234 (243)
-|+|-.|+..+++...+. ++.++.|.-..+-..-+.|.. .++|.+....-- ..+..-|+|+.-.-.
T Consensus 92 AGMGG~lI~~ILee~~~~l~~~~rlILQPn~~~~~LR~~L~-~~~~~I~~E~il-----eE~~kiYEIlv~e~~ 159 (226)
T COG2384 92 AGMGGTLIREILEEGKEKLKGVERLILQPNIHTYELREWLS-ANSYEIKAETIL-----EEDGKIYEILVVEKS 159 (226)
T ss_pred eCCcHHHHHHHHHHhhhhhcCcceEEECCCCCHHHHHHHHH-hCCceeeeeeee-----cccCeEEEEEEEecC
Confidence 578888886666555443 677777765554444556777 999999874332 223558888766544
No 145
>PRK05031 tRNA (uracil-5-)-methyltransferase; Validated
Probab=39.14 E-value=94 Score=27.84 Aligned_cols=70 Identities=13% Similarity=0.123 Sum_probs=48.6
Q ss_pred EEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhH--HHHHHhCCCcEEeccCCCCCCCCCCCcceEEEE
Q 048770 152 YELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLA--MNFYLSKLRYVVSSISPSRVDPFTGVEKSYEIL 229 (243)
Q Consensus 152 ~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A--~~fY~~klGF~~~~~~p~~~~~~~g~~~~y~il 229 (243)
.-+.++|.+ .|++..+++.+.. .-.-|++.|.+.. -| ++.+. + ||++....|-..-|.+.+-....+|
T Consensus 290 D~v~lDPPR--~G~~~~~l~~l~~-----~~~ivyvSC~p~t-larDl~~L~-~-gY~l~~v~~~DmFPqT~HvE~v~lL 359 (362)
T PRK05031 290 STIFVDPPR--AGLDDETLKLVQA-----YERILYISCNPET-LCENLETLS-Q-THKVERFALFDQFPYTHHMECGVLL 359 (362)
T ss_pred CEEEECCCC--CCCcHHHHHHHHc-----cCCEEEEEeCHHH-HHHHHHHHc-C-CcEEEEEEEcccCCCCCcEEEEEEE
Confidence 457789994 7899999888865 1346788888743 23 34555 5 9999999888877776665555555
Q ss_pred ee
Q 048770 230 CK 231 (243)
Q Consensus 230 ~k 231 (243)
++
T Consensus 360 ~r 361 (362)
T PRK05031 360 EK 361 (362)
T ss_pred Ee
Confidence 43
No 146
>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.
Probab=37.83 E-value=35 Score=24.24 Aligned_cols=31 Identities=19% Similarity=0.264 Sum_probs=21.8
Q ss_pred CCCEEEEEEecCCHhHHHHHHhCCCcEEeccC
Q 048770 181 RMGAVVLTVQKANLLAMNFYLSKLRYVVSSIS 212 (243)
Q Consensus 181 ~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~ 212 (243)
|+..|.|.|..- ..|+.||.+.+||+.....
T Consensus 1 ~i~hv~l~v~d~-~~a~~FY~~~lG~~~~~~~ 31 (126)
T cd08346 1 GLHHVTLITRDA-QETVDFYTDVLGLRLVKKT 31 (126)
T ss_pred CcccEEEEcCCh-hHhHHHHHHccCCEEeeeE
Confidence 345677776443 4689999856999987654
No 147
>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=37.51 E-value=30 Score=25.04 Aligned_cols=24 Identities=21% Similarity=0.326 Sum_probs=17.2
Q ss_pred EEEEEecCCHhHHHHHHhCCCcEEec
Q 048770 185 VVLTVQKANLLAMNFYLSKLRYVVSS 210 (243)
Q Consensus 185 i~l~v~~~N~~A~~fY~~klGF~~~~ 210 (243)
+.|.|.. =.+|+.||+ .+||+...
T Consensus 4 v~l~V~D-l~~s~~FY~-~lGf~~~~ 27 (124)
T cd09012 4 INLPVKD-LEKSTAFYT-ALGFEFNP 27 (124)
T ss_pred EEeecCC-HHHHHHHHH-HCCCEEcc
Confidence 4455533 357899999 89999764
No 148
>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein.; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....
Probab=37.16 E-value=21 Score=25.39 Aligned_cols=31 Identities=19% Similarity=0.390 Sum_probs=23.5
Q ss_pred CCEEEEEEecCCHhHHHHHHhCCCcEEeccCC
Q 048770 182 MGAVVLTVQKANLLAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 182 ~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p 213 (243)
+..|.+.|..-. .++.||++-+||+......
T Consensus 2 l~Hi~i~v~d~~-~~~~FY~~~lG~~~~~~~~ 32 (128)
T PF00903_consen 2 LDHIAIRVKDLE-KAIDFYTDVLGFRLVEESD 32 (128)
T ss_dssp EEEEEEEESCHH-HHHHHHHHTTTSEEEEEEE
T ss_pred eEEEEEEcCCHH-HHHHHHHHHhCCcEEeeec
Confidence 345667665544 6899999789999988766
No 149
>PRK04531 acetylglutamate kinase; Provisional
Probab=35.60 E-value=74 Score=29.05 Aligned_cols=56 Identities=13% Similarity=0.234 Sum_probs=41.4
Q ss_pred CEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcE
Q 048770 147 PVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYV 207 (243)
Q Consensus 147 ~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~ 207 (243)
.+.|+.-+.|.+..||.|++..+...+.+- ...+...+..+|+.-.=||++.-|+-
T Consensus 309 ~~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~-----~~~L~Wrsr~~n~~~~Wyf~~s~G~~ 364 (398)
T PRK04531 309 GGPYLDKFAVLDDARGEGLGRAVWNVMREE-----TPQLFWRSRHNNTINKFYYAESDGCI 364 (398)
T ss_pred CceEeEEEEEccchhhcChHHHHHHHHHhh-----CCceEEEcCCCCCccceeeecccceE
Confidence 467999999999999999999999987633 24688899888874433344244443
No 150
>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase. This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do
Probab=33.62 E-value=42 Score=24.14 Aligned_cols=32 Identities=25% Similarity=0.129 Sum_probs=22.2
Q ss_pred CCCEEEEEEecCCHhHHHHHHhCCCcEEeccCC
Q 048770 181 RMGAVVLTVQKANLLAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 181 ~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p 213 (243)
++..+.|.|.. =.+|.+||.+.+||+.....+
T Consensus 4 ~l~hv~l~v~D-l~~s~~FY~~~lG~~~~~~~~ 35 (122)
T cd07265 4 RPGHVQLRVLD-LEEAIKHYREVLGLDEVGRDD 35 (122)
T ss_pred eEeEEEEEeCC-HHHHHHHHHhccCCEeeeecC
Confidence 34556676654 346899998569999876543
No 151
>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.
Probab=33.41 E-value=41 Score=26.05 Aligned_cols=32 Identities=19% Similarity=0.170 Sum_probs=22.9
Q ss_pred CCCEEEEEEecCCHhHHHHHHhCCCcEEeccCC
Q 048770 181 RMGAVVLTVQKANLLAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 181 ~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p 213 (243)
|++.|.+.|..- ..+..||++.+||+.....+
T Consensus 1 gl~HI~i~V~Dl-e~s~~FY~~~LG~~~~~~~~ 32 (157)
T cd08347 1 GLHGVTLTVRDP-EATAAFLTDVLGFREVGEEG 32 (157)
T ss_pred CcccEEEEeCCH-HHHHHHHHHhcCCEEEeeeC
Confidence 456677777554 46899997468999876654
No 152
>COG0375 HybF Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) [General function prediction only]
Probab=31.93 E-value=1.3e+02 Score=22.50 Aligned_cols=37 Identities=30% Similarity=0.353 Sum_probs=27.7
Q ss_pred CHHHHHHHHHHHHHHHcCC---CEEEEEEec---CCHhHHHHH
Q 048770 164 GLGKFLMQLIELIARKNRM---GAVVLTVQK---ANLLAMNFY 200 (243)
Q Consensus 164 GlG~~L~~~l~~~a~~~~~---~~i~l~v~~---~N~~A~~fY 200 (243)
.+...++..++++|++++. ..|+|.+.. -|+.+.+|-
T Consensus 5 Sla~aii~~i~~~A~~~~a~~V~~V~l~IG~ls~v~~~~l~Fa 47 (115)
T COG0375 5 SLAQAIIELIEEQAEKHGAKRVTAVWLEIGELSCVEPEALRFA 47 (115)
T ss_pred HHHHHHHHHHHHHHHHcCCceEEEEEEEEcceeccCHHHHHHH
Confidence 4778899999999999987 455665543 278777764
No 153
>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=31.46 E-value=37 Score=24.37 Aligned_cols=19 Identities=16% Similarity=0.205 Sum_probs=15.8
Q ss_pred HhHHHHHHhCCCcEEeccCC
Q 048770 194 LLAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 194 ~~A~~fY~~klGF~~~~~~p 213 (243)
.+|++||+ .+||+.....+
T Consensus 13 ~~s~~FY~-~LGf~~~~~~~ 31 (113)
T cd08356 13 AESKQFYQ-ALGFELEWEND 31 (113)
T ss_pred HHHHHHHH-HhCCeeEecCC
Confidence 57899999 89999987654
No 154
>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=31.28 E-value=51 Score=23.60 Aligned_cols=32 Identities=31% Similarity=0.366 Sum_probs=22.8
Q ss_pred CCEEEEEEecCCHhHHHHHHhCCCcEEeccCCC
Q 048770 182 MGAVVLTVQKANLLAMNFYLSKLRYVVSSISPS 214 (243)
Q Consensus 182 ~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~ 214 (243)
+..|.|.|..- .++.+||.+.+||+.....+.
T Consensus 3 i~hi~l~v~d~-~~~~~Fy~~~lG~~~~~~~~~ 34 (125)
T cd07255 3 IGAVTLRVADL-ERSLAFYQDVLGLEVLERTDS 34 (125)
T ss_pred EEEEEEEECCH-HHHHHHHHhccCcEEEEcCCC
Confidence 45677777544 458899985699999877543
No 155
>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=31.12 E-value=48 Score=24.94 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=18.3
Q ss_pred EEEEEEecCCHhHHHHHHhCCCcEEec
Q 048770 184 AVVLTVQKANLLAMNFYLSKLRYVVSS 210 (243)
Q Consensus 184 ~i~l~v~~~N~~A~~fY~~klGF~~~~ 210 (243)
.+++.|.. -.+|++||++.+||+...
T Consensus 5 Hv~irV~D-lerSi~FY~~vLG~~~~~ 30 (127)
T cd08358 5 HFVFKVGN-RNKTIKFYREVLGMKVLR 30 (127)
T ss_pred EEEEEeCC-HHHHHHHHHHhcCCEEEe
Confidence 45555543 457999996479998755
No 156
>PHA02769 hypothetical protein; Provisional
Probab=29.45 E-value=58 Score=24.29 Aligned_cols=48 Identities=13% Similarity=0.154 Sum_probs=31.8
Q ss_pred CCHHHHHHHHHHHHHHHc---CCCEEEEEEecCCHhHHHHHHhCCCcEEeccCC
Q 048770 163 KGLGKFLMQLIELIARKN---RMGAVVLTVQKANLLAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 163 ~GlG~~L~~~l~~~a~~~---~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p 213 (243)
..-|..|+..+...+.+. |..-++.--+++. +-++|. +.||+.+|...
T Consensus 91 ~apgd~lvnfl~~l~~k~~~dg~evlwtlgfpdh--snaly~-kagfk~vg~ts 141 (154)
T PHA02769 91 TAPGDHLVNFLNDLAEKLKKDGFEVLWTLGFPDH--SNALYK-KAGFKLVGQTS 141 (154)
T ss_pred cCChHHHHHHHHHHHHHHhcCCeEEEEEecCCCc--chhHHh-hhhhhHhcccc
Confidence 345777887777766553 6655554445543 447899 99999988543
No 157
>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione. Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly
Probab=29.18 E-value=68 Score=22.64 Aligned_cols=28 Identities=18% Similarity=0.193 Sum_probs=19.6
Q ss_pred CEEEEEEecCCHhHHHHHHhCCCcEEecc
Q 048770 183 GAVVLTVQKANLLAMNFYLSKLRYVVSSI 211 (243)
Q Consensus 183 ~~i~l~v~~~N~~A~~fY~~klGF~~~~~ 211 (243)
..+.+.|..- .+|.+||.+.+||+....
T Consensus 2 ~hv~i~v~d~-~~a~~fY~~~lG~~~~~~ 29 (121)
T cd07233 2 LHTMLRVKDL-EKSLDFYTDVLGMKLLRR 29 (121)
T ss_pred eeEEEEecCc-HHHHHHHHhccCCeEEEE
Confidence 3466666443 468999985689998764
No 158
>PF04393 DUF535: Protein of unknown function (DUF535); InterPro: IPR007488 Family member Shigella flexneri VirK (Q99QA5 from SWISSPROT) is a virulence protein required for the expression, or correct membrane localisation of IcsA (VirG) on the bacterial cell surface [, ]. This family also includes Pasteurella haemolytica lapB (P32181 from SWISSPROT), which is thought to be membrane-associated.
Probab=29.13 E-value=3.8e+02 Score=23.21 Aligned_cols=71 Identities=15% Similarity=0.219 Sum_probs=51.8
Q ss_pred cceEEeee-CCeEEEEEEEEeeecCCcCEEEEEEEEEccc-------------ccCCCHHHHHHHHHHHHHHHcCCCEEE
Q 048770 121 SKTNFAES-KGSIVGFVHFRFCLEEDVPVLYVYELQLESR-------------VQGKGLGKFLMQLIELIARKNRMGAVV 186 (243)
Q Consensus 121 ~~~~va~~-~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~-------------~rg~GlG~~L~~~l~~~a~~~~~~~i~ 186 (243)
...+...+ +|.++..+.|.+....+.+.++|..|+--.. ..|.==-+.||+.+..+|...|+..|.
T Consensus 126 el~L~L~~~~~~~ly~~tF~~~~~~~~~~l~IG~lQGp~~~~~~e~ik~~TK~~hGlrPK~ll~e~l~~la~~~~~~~i~ 205 (288)
T PF04393_consen 126 ELSLSLRDEEGQRLYSLTFSFVPQNGENTLFIGGLQGPKSENAHEIIKSATKACHGLRPKRLLLEALQALARALGIEQIL 205 (288)
T ss_pred eeEEEEEcCCCceEEEEEEEEEccCCCceEEEEeeeCCCCCCChHHHHHHHHHhcCcCHHHHHHHHHHHHHHHcCCCEEE
Confidence 34444444 4599999999988777889999999986555 233334456778888999999999887
Q ss_pred EEEec
Q 048770 187 LTVQK 191 (243)
Q Consensus 187 l~v~~ 191 (243)
.....
T Consensus 206 aVsn~ 210 (288)
T PF04393_consen 206 AVSNK 210 (288)
T ss_pred EECCC
Confidence 75443
No 159
>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS). HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su
Probab=29.02 E-value=77 Score=23.47 Aligned_cols=30 Identities=13% Similarity=0.128 Sum_probs=21.2
Q ss_pred CEEEEEEecCCHhHHHHHHhCCCcEEeccCC
Q 048770 183 GAVVLTVQKANLLAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 183 ~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p 213 (243)
+.+.+.|. +=.+|++||++.+||+.....+
T Consensus 2 ~Hi~i~V~-D~e~s~~FY~~vLGf~~~~~~~ 31 (136)
T cd08342 2 DHVEFYVG-NAKQLASWFSTKLGFEPVAYHG 31 (136)
T ss_pred eEEEEEeC-CHHHHHHHHHHhcCCeEEEecC
Confidence 45667774 3457899999449999876543
No 160
>PRK10150 beta-D-glucuronidase; Provisional
Probab=28.96 E-value=3.9e+02 Score=25.67 Aligned_cols=82 Identities=12% Similarity=0.034 Sum_probs=55.1
Q ss_pred EEEEEEEEeeec---CCcCEEEEEEEEEcccc--cCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCc
Q 048770 132 IVGFVHFRFCLE---EDVPVLYVYELQLESRV--QGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRY 206 (243)
Q Consensus 132 ivG~~~~~~~~~---~~~~~~~i~~l~V~~~~--rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF 206 (243)
.+||=.+.+... -+..-+++..+..+++. .|.++....+..-..++++.|+..|++.-.+..+....+.- ++|+
T Consensus 272 ~~GfR~i~~~~~~f~lNG~pv~lrG~~~h~~~~~~G~a~~~~~~~~d~~l~K~~G~N~vR~sh~p~~~~~~~~cD-~~Gl 350 (604)
T PRK10150 272 RFGIRSVAVKGGQFLINGKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLAD-RHGI 350 (604)
T ss_pred eeEEEEEEEeCCEEEECCEEEEEEeeeccCCCCccCCcCCHHHHHHHHHHHHHCCCCEEEeccCCCCHHHHHHHH-hcCc
Confidence 356655544322 11233556666555544 45556666776667788999999999977776777777778 9999
Q ss_pred EEeccCCC
Q 048770 207 VVSSISPS 214 (243)
Q Consensus 207 ~~~~~~p~ 214 (243)
-+....|.
T Consensus 351 lV~~E~p~ 358 (604)
T PRK10150 351 VVIDETPA 358 (604)
T ss_pred EEEEeccc
Confidence 99888775
No 161
>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins. BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.
Probab=28.67 E-value=47 Score=23.85 Aligned_cols=20 Identities=20% Similarity=0.227 Sum_probs=16.1
Q ss_pred CHhHHHHHHhCCCcEEeccCC
Q 048770 193 NLLAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 193 N~~A~~fY~~klGF~~~~~~p 213 (243)
=.+|++||. .+||+.....+
T Consensus 13 l~~s~~FY~-~lG~~~~~~~~ 32 (120)
T cd08350 13 LDATEAFYA-RLGFSVGYRQA 32 (120)
T ss_pred HHHHHHHHH-HcCCEEEecCC
Confidence 357899999 69999877655
No 162
>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=28.43 E-value=57 Score=23.02 Aligned_cols=30 Identities=17% Similarity=0.222 Sum_probs=22.5
Q ss_pred CCCEEEEEEecCCHhHHHHHHhCCCcEEecc
Q 048770 181 RMGAVVLTVQKANLLAMNFYLSKLRYVVSSI 211 (243)
Q Consensus 181 ~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~ 211 (243)
++..|.+.|.. =.+|+.||.+.+||.....
T Consensus 3 ~~~hi~l~v~d-~~~a~~fy~~~lG~~~~~~ 32 (125)
T cd08352 3 GIHHVAIICSD-YEKSKEFYVEILGFKVIRE 32 (125)
T ss_pred ccceEEEEcCC-HHHHHHHHHHhcCCEEeee
Confidence 56778888854 3568999985799998654
No 163
>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]
Probab=28.17 E-value=64 Score=22.49 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=22.8
Q ss_pred CCEEEEEEecCCHhHHHHHHhCCCcEEeccCCC
Q 048770 182 MGAVVLTVQKANLLAMNFYLSKLRYVVSSISPS 214 (243)
Q Consensus 182 ~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~ 214 (243)
+..+.+.|..- ..|+.||...+||+.....+.
T Consensus 3 l~hv~l~v~dl-~~s~~FY~~~LG~~~~~~~~~ 34 (138)
T COG0346 3 IHHVTLAVPDL-EASIDFYTDVLGLRLVKDTVN 34 (138)
T ss_pred eEEEEEeeCCH-hHhHHHHHhhcCCeeeeeccc
Confidence 34566666553 469999984599999886654
No 164
>TIGR03645 glyox_marine lactoylglutathione lyase family protein. Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.
Probab=25.87 E-value=52 Score=25.55 Aligned_cols=28 Identities=18% Similarity=0.302 Sum_probs=21.0
Q ss_pred CCCEEEEEEecCCHhHHHHHHhCCCcEEe
Q 048770 181 RMGAVVLTVQKANLLAMNFYLSKLRYVVS 209 (243)
Q Consensus 181 ~~~~i~l~v~~~N~~A~~fY~~klGF~~~ 209 (243)
++..|.+.|..- .+|+.||++.+||+..
T Consensus 4 ~i~Hv~i~V~Dl-e~s~~FY~~~LG~~~~ 31 (162)
T TIGR03645 4 TFSHIGISVPDL-DAAVKFYTEVLGWYLI 31 (162)
T ss_pred eEEEEEEEeCCH-HHHHHHHHHhcCCEEE
Confidence 456788887654 4699999845999875
No 165
>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1.13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-
Probab=24.90 E-value=89 Score=22.42 Aligned_cols=30 Identities=13% Similarity=0.085 Sum_probs=21.1
Q ss_pred CCCEEEEEEecCCHhHHHHHHhCCCcEEecc
Q 048770 181 RMGAVVLTVQKANLLAMNFYLSKLRYVVSSI 211 (243)
Q Consensus 181 ~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~ 211 (243)
++..|.|.|..-. +|.+||++-+||+....
T Consensus 2 ~l~~v~l~v~Dl~-~s~~FY~~~LG~~~~~~ 31 (120)
T cd07252 2 SLGYLGVESSDLD-AWRRFATDVLGLQVGDR 31 (120)
T ss_pred cccEEEEEeCCHH-HHHHHHHhccCceeccC
Confidence 3456777776544 68999974699987654
No 166
>KOG1472 consensus Histone acetyltransferase SAGA/ADA, catalytic subunit PCAF/GCN5 and related proteins [Chromatin structure and dynamics; Transcription]
Probab=24.83 E-value=18 Score=35.41 Aligned_cols=77 Identities=18% Similarity=0.150 Sum_probs=53.7
Q ss_pred EEEEEEEEeeecCCcCEEEEEEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEecc
Q 048770 132 IVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSI 211 (243)
Q Consensus 132 ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~ 211 (243)
+||-++++...+.+ ..-+.--.|.-..|-+|+|+.+|.++.++.+..+. ...+.+..++ .|+..+. +.||...-.
T Consensus 431 ~vggi~~r~f~~k~--f~eivf~av~~~eqv~g~g~hlmnhlkd~~~~~~~-i~~~ltyad~-~aigyfk-kqgfs~ei~ 505 (720)
T KOG1472|consen 431 VVGGICFRPFPEKG--FTEIVFCAVTTDEQVKGSGTHLMNHLKDYVRSSST-IDYALTYADE-GAIGYFK-KQGFSKEIK 505 (720)
T ss_pred cccccccCcCcccC--CcceeeccccCcccccccCcCchhhHHHHhhccch-HHHHHHhhhh-ccccccc-Cccchhhcc
Confidence 88888887655532 22356667899999999999999999998877642 1223344444 4778887 889875544
Q ss_pred CC
Q 048770 212 SP 213 (243)
Q Consensus 212 ~p 213 (243)
.+
T Consensus 506 ~~ 507 (720)
T KOG1472|consen 506 FE 507 (720)
T ss_pred cc
Confidence 33
No 167
>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A ....
Probab=24.75 E-value=62 Score=22.34 Aligned_cols=22 Identities=27% Similarity=0.259 Sum_probs=17.4
Q ss_pred HhHHHHHHhCCCcEEeccCCCC
Q 048770 194 LLAMNFYLSKLRYVVSSISPSR 215 (243)
Q Consensus 194 ~~A~~fY~~klGF~~~~~~p~~ 215 (243)
..|.+||++.+||+.....+..
T Consensus 7 ~~a~~FY~~~lg~~~~~~~~~~ 28 (108)
T PF12681_consen 7 EAAAAFYEDVLGFEVVFDDPDY 28 (108)
T ss_dssp HHHHHHHHHTTTSEEEEEETSE
T ss_pred HHHHHHHHHhcCCEEEEeCCCe
Confidence 4689999956999999965543
No 168
>PRK11478 putative lyase; Provisional
Probab=23.94 E-value=59 Score=23.42 Aligned_cols=29 Identities=14% Similarity=0.340 Sum_probs=20.6
Q ss_pred CCCEEEEEEecCCHhHHHHHHhCCCcEEec
Q 048770 181 RMGAVVLTVQKANLLAMNFYLSKLRYVVSS 210 (243)
Q Consensus 181 ~~~~i~l~v~~~N~~A~~fY~~klGF~~~~ 210 (243)
++..|.+.|.. =.+|++||.+.+||++..
T Consensus 6 ~i~hv~l~v~D-~~~a~~FY~~~LG~~~~~ 34 (129)
T PRK11478 6 QVHHIAIIATD-YAVSKAFYCDILGFTLQS 34 (129)
T ss_pred eecEEEEEcCC-HHHHHHHHHHHhCCEecc
Confidence 45567777744 346889997479999864
No 169
>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp. JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C
Probab=23.45 E-value=78 Score=22.64 Aligned_cols=32 Identities=16% Similarity=0.117 Sum_probs=22.0
Q ss_pred CCCEEEEEEecCCHhHHHHHHhCCCcEEeccCC
Q 048770 181 RMGAVVLTVQKANLLAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 181 ~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p 213 (243)
++..+.+.|.. =.+|.+||++-+||+.....+
T Consensus 6 ~i~hv~l~v~d-l~~a~~FY~~~lG~~~~~~~~ 37 (121)
T cd09013 6 HLAHVELLTPK-PEESLWFFTDVLGLEETGREG 37 (121)
T ss_pred EeeEEEEEeCC-HHHHHHHHHhCcCCEEEeecC
Confidence 34556666643 357899998568999876543
No 170
>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=23.20 E-value=1.3e+02 Score=21.29 Aligned_cols=20 Identities=10% Similarity=0.169 Sum_probs=15.7
Q ss_pred HhHHHHHHhCCCcEEeccCC
Q 048770 194 LLAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 194 ~~A~~fY~~klGF~~~~~~p 213 (243)
..|..||.+-+||+.....+
T Consensus 13 ~~a~~FY~~~lG~~~~~~~~ 32 (120)
T cd07254 13 EASIAFYSKLFGVEPTKVRD 32 (120)
T ss_pred HHHHHHHHHHhCCeEecccC
Confidence 57899998788998766543
No 171
>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase. This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.
Probab=23.19 E-value=60 Score=23.07 Aligned_cols=29 Identities=14% Similarity=0.064 Sum_probs=20.0
Q ss_pred CCEEEEEEecCCHhHHHHHHhCCCcEEeccC
Q 048770 182 MGAVVLTVQKANLLAMNFYLSKLRYVVSSIS 212 (243)
Q Consensus 182 ~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~ 212 (243)
+..+.+.|.. =.+|.+||. .+||+.....
T Consensus 4 l~hv~l~v~D-l~~s~~FY~-~lGl~~~~~~ 32 (113)
T cd07267 4 IAHVRFEHPD-LDKAERFLT-DFGLEVAART 32 (113)
T ss_pred EEEEEEccCC-HHHHHHHHH-HcCCEEEEec
Confidence 3455666654 346889999 7999886543
No 172
>PTZ00129 40S ribosomal protein S14; Provisional
Probab=22.70 E-value=3.8e+02 Score=20.97 Aligned_cols=47 Identities=9% Similarity=0.105 Sum_probs=37.2
Q ss_pred CHHHHHH-HHHHHHHHHcCCCEEEEEE-----------ecCCHhHHHHHHhCCCcEEecc
Q 048770 164 GLGKFLM-QLIELIARKNRMGAVVLTV-----------QKANLLAMNFYLSKLRYVVSSI 211 (243)
Q Consensus 164 GlG~~L~-~~l~~~a~~~~~~~i~l~v-----------~~~N~~A~~fY~~klGF~~~~~ 211 (243)
-++.++. +.+...+.+.|+..|.+.+ .+....|++-.. +.|+++...
T Consensus 71 pyAAq~aa~~~a~k~~~~Gi~~v~V~vr~~gg~~~kg~GpGr~~airaL~-~~glkI~~I 129 (149)
T PTZ00129 71 PYAAMMAAQDVAARCKELGINALHIKLRATGGVRTKTPGPGAQAALRALA-RAGLKIGRI 129 (149)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEEEEecCCCCCCCCCCCHHHHHHHHH-HCCCEEEEE
Confidence 4555444 7777778888999999999 466788999999 999998664
No 173
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=22.42 E-value=1.4e+02 Score=21.30 Aligned_cols=23 Identities=22% Similarity=0.371 Sum_probs=19.7
Q ss_pred cCCCHHHHHH--HHHHHHHHHcCCC
Q 048770 161 QGKGLGKFLM--QLIELIARKNRMG 183 (243)
Q Consensus 161 rg~GlG~~L~--~~l~~~a~~~~~~ 183 (243)
-|.|+|+-+| ..+++.+++.|+.
T Consensus 8 CG~GvgSS~~ik~kve~~l~~~gi~ 32 (93)
T COG3414 8 CGNGVGSSTMIKMKVEEVLKELGID 32 (93)
T ss_pred CCCCccHHHHHHHHHHHHHHHcCCC
Confidence 4899999877 8889999999986
No 174
>COG2348 Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]
Probab=22.31 E-value=4.9e+02 Score=24.07 Aligned_cols=55 Identities=15% Similarity=0.213 Sum_probs=41.6
Q ss_pred cccCCCHHHHHHHHHHHHHHHcCCCEEEEE---------------EecCCHhHHHHHHhCCCcEEeccCCC
Q 048770 159 RVQGKGLGKFLMQLIELIARKNRMGAVVLT---------------VQKANLLAMNFYLSKLRYVVSSISPS 214 (243)
Q Consensus 159 ~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~---------------v~~~N~~A~~fY~~klGF~~~~~~p~ 214 (243)
+|-++.+-..+++.+...++...+-.|.+. ....|.+.++.+. .+||+..+-...
T Consensus 78 dy~~~~l~~~~~k~l~~y~k~~~~l~i~idP~l~~~~~~~~~~~~~~~~n~~~i~~l~-~lG~k~~g~t~~ 147 (418)
T COG2348 78 DYSNQELLDYFIKELKKYAKSKRALFIKIDPYLVYQQFDLGGEIIENYNNLAIIKLLK-DLGYKHSGFTKG 147 (418)
T ss_pred cccchHHHHHHHHHHHHHHhhccceEEEeccchhhhcccCCCccccCcchHHHHHHHH-HhhhhhcCcccc
Confidence 888889999999999999987655444421 1145788999999 999998875444
No 175
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism]
Probab=22.25 E-value=2.3e+02 Score=22.86 Aligned_cols=48 Identities=13% Similarity=0.139 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEeccCCC
Q 048770 165 LGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSISPS 214 (243)
Q Consensus 165 lG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~ 214 (243)
.|+-|+.++.+.+++ .+..+.+.+.++-+.-..|.+ +.|+++..+.-.
T Consensus 25 ~GkpLI~~v~~al~~-~~d~i~v~isp~tp~t~~~~~-~~gv~vi~tpG~ 72 (177)
T COG2266 25 CGKPLIDRVLEALRK-IVDEIIVAISPHTPKTKEYLE-SVGVKVIETPGE 72 (177)
T ss_pred CCccHHHHHHHHHHh-hcCcEEEEeCCCCHhHHHHHH-hcCceEEEcCCC
Confidence 367788888877766 788999999998888888888 999998887555
No 176
>PF03983 SHD1: SLA1 homology domain 1, SHD1 ; InterPro: IPR007131 The SLA1 homology domain is found in the cytoskeleton assembly control protein SLA1, which is responsible for the correct formation of the actin cytoskeleton.; GO: 0008092 cytoskeletal protein binding, 0030674 protein binding, bridging, 0042802 identical protein binding, 0043130 ubiquitin binding; PDB: 2HBP_A.
Probab=22.13 E-value=1.6e+02 Score=19.94 Aligned_cols=26 Identities=23% Similarity=0.500 Sum_probs=18.1
Q ss_pred CCeEEEEEeccCCCCCHHHHHHHHHHHHh
Q 048770 48 NGLSVHLESGCGDKLSSAEKQYILNLLKA 76 (243)
Q Consensus 48 ~g~~~~l~~~~~~~l~~~~~~~i~~L~~~ 76 (243)
||..+.+- .+.|+.+|.+|+-.++..
T Consensus 42 nG~~i~VP---~~kLS~~D~~yve~~tg~ 67 (70)
T PF03983_consen 42 NGVKIAVP---LEKLSDEDQEYVEKITGK 67 (70)
T ss_dssp TS-EEEEE---TTSB-HHHHHHHHHHHS-
T ss_pred CCeEEEeE---hHHcCHHHHHHHHHHhcc
Confidence 66655554 789999999999987653
No 177
>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1.13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are
Probab=22.12 E-value=96 Score=22.54 Aligned_cols=31 Identities=29% Similarity=0.465 Sum_probs=21.2
Q ss_pred CCEEEEEEecCCHhHHHHHHhCCCcEEeccCC
Q 048770 182 MGAVVLTVQKANLLAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 182 ~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p 213 (243)
+..|.+.|..- .++++||.+.+||+.....+
T Consensus 2 i~hv~l~v~D~-~~s~~FY~~~lG~~~~~~~~ 32 (134)
T cd08348 2 LSHVVLYVRDL-EAMVRFYRDVLGFTVTDRGP 32 (134)
T ss_pred eeEEEEEecCH-HHHHHHHHHhcCCEEEeecc
Confidence 34566666543 46889998459999876554
No 178
>TIGR00068 glyox_I lactoylglutathione lyase. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.
Probab=21.80 E-value=57 Score=24.70 Aligned_cols=30 Identities=20% Similarity=0.318 Sum_probs=22.3
Q ss_pred cCCCEEEEEEecCCHhHHHHHHhCCCcEEec
Q 048770 180 NRMGAVVLTVQKANLLAMNFYLSKLRYVVSS 210 (243)
Q Consensus 180 ~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~ 210 (243)
.++..|.+.|..-+ +|+.||..-+||+...
T Consensus 16 ~~i~hv~l~v~Dl~-~a~~FY~~vLG~~~~~ 45 (150)
T TIGR00068 16 RRLLHTMLRVGDLD-KSLDFYTEVLGMKLLR 45 (150)
T ss_pred ceEEEEEEEecCHH-HHHHHHHHhcCCEEEE
Confidence 45667788876544 6899997569999754
No 179
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=21.72 E-value=6.1e+02 Score=23.03 Aligned_cols=80 Identities=11% Similarity=0.080 Sum_probs=44.4
Q ss_pred CeEEEEEEEEeeecC-CcCEEEEEEEEEcc--cccCCCHHHHHHHHHHHHHHHcCCCEEEEEE---------------ec
Q 048770 130 GSIVGFVHFRFCLEE-DVPVLYVYELQLES--RVQGKGLGKFLMQLIELIARKNRMGAVVLTV---------------QK 191 (243)
Q Consensus 130 g~ivG~~~~~~~~~~-~~~~~~i~~l~V~~--~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v---------------~~ 191 (243)
+.++|.+.+...... +...+|| -=-| +|...-+-..+++.+..++++.++-.|.+.- ..
T Consensus 45 ~~v~aa~ll~~~~~~~g~~~~yi---prGPv~d~~d~ell~~f~~~Lk~~akk~~a~~lridP~~~~~~~~~~g~~~~~~ 121 (406)
T PF02388_consen 45 GEVAAAALLLRKKPFKGFKYAYI---PRGPVMDYSDEELLEFFLEELKKYAKKKRALFLRIDPNVIYQERDEDGEPIEGE 121 (406)
T ss_dssp S-EEEEEEEEEEECTTTCEEEEE---TT--EC-TT-HHHHHHHHHHHHHHHCTTTEEEEEE--S-EEECE-TTS-EEEE-
T ss_pred CeEEEEEEEEEeccCCceeEEEE---CCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEeCchhhhhcccccccccCc
Confidence 677665544322222 2223333 2234 7777888889999999999886654444311 22
Q ss_pred CCHhHHHHHHhCCCcEEeccCC
Q 048770 192 ANLLAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 192 ~N~~A~~fY~~klGF~~~~~~p 213 (243)
.|...+..+. .+||...+...
T Consensus 122 ~~~~~~~~l~-~~G~~~~g~~~ 142 (406)
T PF02388_consen 122 ENDELIENLK-ALGFRHQGFTK 142 (406)
T ss_dssp S-THHHHHHH-HTT-CCTS-SS
T ss_pred chHHHHHHHH-hcCceecCccc
Confidence 4567789999 99999887555
No 180
>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=21.72 E-value=1.2e+02 Score=21.34 Aligned_cols=32 Identities=31% Similarity=0.396 Sum_probs=23.1
Q ss_pred CCCEEEEEEecCCHhHHHHHHhCCCcEEeccCC
Q 048770 181 RMGAVVLTVQKANLLAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 181 ~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p 213 (243)
++..+.+.|.. =.++++||++-+||+.....+
T Consensus 3 ~l~hi~l~v~d-~~~s~~Fy~~~lG~~~~~~~~ 34 (125)
T cd07253 3 RIDHVVLTVAD-IEATLDFYTRVLGMEVVRFGE 34 (125)
T ss_pred ccceEEEEecC-HHHHHHHHHHHhCceeecccc
Confidence 45677777743 456899999449999877544
No 181
>PRK04101 fosfomycin resistance protein FosB; Provisional
Probab=21.57 E-value=98 Score=22.99 Aligned_cols=32 Identities=13% Similarity=0.170 Sum_probs=22.1
Q ss_pred CCCEEEEEEecCCHhHHHHHHhCCCcEEeccCC
Q 048770 181 RMGAVVLTVQKANLLAMNFYLSKLRYVVSSISP 213 (243)
Q Consensus 181 ~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p 213 (243)
++..|.|.|..- .++.+||++.+||++....+
T Consensus 4 ~i~hi~L~v~Dl-~~s~~FY~~~lG~~~~~~~~ 35 (139)
T PRK04101 4 GINHICFSVSNL-EKSIEFYEKVLGAKLLVKGR 35 (139)
T ss_pred cEEEEEEEecCH-HHHHHHHHhccCCEEEeecC
Confidence 445666766543 46889997689999875433
No 182
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=21.34 E-value=2.1e+02 Score=21.88 Aligned_cols=51 Identities=20% Similarity=0.188 Sum_probs=34.5
Q ss_pred cccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHHHHHHhCCCcEEeccCCC
Q 048770 159 RVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAMNFYLSKLRYVVSSISPS 214 (243)
Q Consensus 159 ~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~p~ 214 (243)
+=||-|+|+.+++.+....- +.+.+...-.|.-|-.--. |.|-..-.+-.+
T Consensus 6 DGQGGGiG~~iv~~lr~~~~----~~~eI~AlGTNa~AT~~Ml-KaGA~~gATGEN 56 (131)
T PF12953_consen 6 DGQGGGIGKQIVEKLRKELP----EEVEIIALGTNAIATSAML-KAGANEGATGEN 56 (131)
T ss_pred eCCCChhHHHHHHHHHHhCC----CCcEEEEEehhHHHHHHHH-HcCCCCcccccc
Confidence 45899999999998864432 2466666667777777667 777665444333
No 183
>TIGR02143 trmA_only tRNA (uracil-5-)-methyltransferase. This family consists exclusively of proteins believed to act as tRNA (uracil-5-)-methyltransferase. All members of far are proteobacterial. The seed alignment was taken directly from pfam05958 in Pfam 12.0, but higher cutoffs are used to select only functionally equivalent proteins. Homologous proteins excluded by the higher cutoff scores of this model include other uracil methyltransferases, such as RumA, active on rRNA.
Probab=20.92 E-value=2.9e+02 Score=24.65 Aligned_cols=69 Identities=12% Similarity=0.062 Sum_probs=46.1
Q ss_pred EEEEEcccccCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHhHH--HHHHhCCCcEEeccCCCCCCCCCCCcceEEEE
Q 048770 152 YELQLESRVQGKGLGKFLMQLIELIARKNRMGAVVLTVQKANLLAM--NFYLSKLRYVVSSISPSRVDPFTGVEKSYEIL 229 (243)
Q Consensus 152 ~~l~V~~~~rg~GlG~~L~~~l~~~a~~~~~~~i~l~v~~~N~~A~--~fY~~klGF~~~~~~p~~~~~~~g~~~~y~il 229 (243)
.-+.++|. +.|++..+++.+.. .-.-|++.|.+.- -|. +.+. + ||++....|-..-|.+.+-....+|
T Consensus 281 d~v~lDPP--R~G~~~~~l~~l~~-----~~~ivYvsC~p~t-laRDl~~L~-~-~Y~l~~v~~~DmFP~T~HvE~v~lL 350 (353)
T TIGR02143 281 STIFVDPP--RAGLDPDTCKLVQA-----YERILYISCNPET-LKANLEQLS-E-THRVERFALFDQFPYTHHMECGVLL 350 (353)
T ss_pred CEEEECCC--CCCCcHHHHHHHHc-----CCcEEEEEcCHHH-HHHHHHHHh-c-CcEEEEEEEcccCCCCCcEEEEEEE
Confidence 45778999 58999999988764 2346777777642 232 2333 2 4999998888877776664444444
Q ss_pred e
Q 048770 230 C 230 (243)
Q Consensus 230 ~ 230 (243)
.
T Consensus 351 ~ 351 (353)
T TIGR02143 351 E 351 (353)
T ss_pred E
Confidence 3
No 184
>PF06933 SSP160: Special lobe-specific silk protein SSP160; InterPro: IPR009701 This family consists of several special lobe-specific silk protein SSP160 sequences which appear to be specific to Chironomus (Midge) species.
Probab=20.36 E-value=85 Score=28.74 Aligned_cols=21 Identities=38% Similarity=0.422 Sum_probs=18.2
Q ss_pred hhHHHHhhhHHHHHHHHHHHH
Q 048770 4 RNREKKRKRREILEKKKAIDE 24 (243)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~ 24 (243)
|+.+||-|||..++||.+.++
T Consensus 379 ~sg~~kvkrkarlekmrak~r 399 (756)
T PF06933_consen 379 KSGQKKVKRKARLEKMRAKCR 399 (756)
T ss_pred hcchHHHHHHHHHHHHHHHHH
Confidence 677999999999999998765
No 185
>PF06559 DCD: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); InterPro: IPR010550 This family consists of several bacterial 2'-deoxycytidine 5'-triphosphate deaminase proteins (3.5.4.13 from EC).; GO: 0008829 dCTP deaminase activity; PDB: 2R9Q_C.
Probab=20.22 E-value=53 Score=29.27 Aligned_cols=36 Identities=31% Similarity=0.432 Sum_probs=12.2
Q ss_pred eeCCeEEEEEEEEeeecCCcCEEEEEEEEEcccccCCCH
Q 048770 127 ESKGSIVGFVHFRFCLEEDVPVLYVYELQLESRVQGKGL 165 (243)
Q Consensus 127 ~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~~~~rg~Gl 165 (243)
.++|++||-..|..-.+... .+|.-.+...|||||+
T Consensus 321 lehGQ~vgrLvyE~m~~~P~---~lYG~~~gSnYq~QgL 356 (364)
T PF06559_consen 321 LEHGQIVGRLVYERMAERPE---RLYGAGIGSNYQGQGL 356 (364)
T ss_dssp EETT-EEEEEEEEEBSS-------TTSS-----------
T ss_pred eeCCcEEEEEEehhhccCcc---ccccccccccchhhhh
Confidence 34688999877753333221 2455567889999986
No 186
>TIGR00100 hypA hydrogenase nickel insertion protein HypA. In Hpylori, hypA mutant abolished hydrogenase activity and decrease in urease activity. Nickel supplementation in media restored urease activity and partial hydrogenase activity. HypA probably involved in inserting Ni in enzymes.
Probab=20.11 E-value=3e+02 Score=20.24 Aligned_cols=38 Identities=21% Similarity=0.364 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCE---EEEEEecC---CHhHHHHHH
Q 048770 164 GLGKFLMQLIELIARKNRMGA---VVLTVQKA---NLLAMNFYL 201 (243)
Q Consensus 164 GlG~~L~~~l~~~a~~~~~~~---i~l~v~~~---N~~A~~fY~ 201 (243)
+|...+++.+++.|++++..+ |.|.+..- ++.+++|.-
T Consensus 5 sia~~iv~~v~~~a~~~~~~~V~~V~l~iG~ls~V~p~~L~faf 48 (115)
T TIGR00100 5 SLAEAMLEIVEEQAEKHQAKKVTRVTLEIGELSCVNPSQLQFAF 48 (115)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEEEEEccccccCHHHHHHHH
Confidence 678889999999988877655 55555432 566666653
No 187
>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.
Probab=20.01 E-value=77 Score=22.39 Aligned_cols=30 Identities=20% Similarity=0.193 Sum_probs=21.0
Q ss_pred CCCEEEEEEecCCHhHHHHHHhCCCcEEeccC
Q 048770 181 RMGAVVLTVQKANLLAMNFYLSKLRYVVSSIS 212 (243)
Q Consensus 181 ~~~~i~l~v~~~N~~A~~fY~~klGF~~~~~~ 212 (243)
++..|.|.|.. =.++.+||. .+||+.....
T Consensus 2 ~i~hv~l~v~d-~~~s~~FY~-~lG~~~~~~~ 31 (112)
T cd08344 2 SIDHFALEVPD-LEVARRFYE-AFGLDVREEG 31 (112)
T ss_pred ceeEEEEecCC-HHHHHHHHH-HhCCcEEeec
Confidence 34556666653 356889999 8999987543
Done!