Your job contains 1 sequence.
>048771
MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK
QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH
TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW
VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPRGSAILYALTTL
APARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGG
GSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGR
RPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANG
FPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSR
VGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTC
AELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNY
STNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGL
RTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPV
FTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSM
GRPVSYERAVAWKVLNEEETAHCICFMFINWSFV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048771
(814 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2034086 - symbol:ATHB-15 "AT1G52150" species:3... 2607 0. 2
TAIR|locus:2134088 - symbol:HB-8 "AT4G32880" species:3702... 2280 0. 2
TAIR|locus:2061544 - symbol:PHB "AT2G34710" species:3702 ... 1876 4.5e-286 2
TAIR|locus:2028140 - symbol:PHV "AT1G30490" species:3702 ... 1773 7.6e-273 2
TAIR|locus:2175856 - symbol:REV "AT5G60690" species:3702 ... 2590 2.6e-269 1
TAIR|locus:2119048 - symbol:ATML1 "AT4G21750" species:370... 165 1.4e-23 3
TAIR|locus:2135368 - symbol:PDF2 "AT4G04890" species:3702... 185 8.1e-23 3
TAIR|locus:2207235 - symbol:HDG2 "AT1G05230" species:3702... 153 1.5e-18 3
TAIR|locus:2127008 - symbol:ANL2 "ANTHOCYANINLESS 2" spec... 146 2.3e-15 3
TAIR|locus:2098866 - symbol:HDG1 "AT3G61150" species:3702... 147 4.0e-13 3
TAIR|locus:2097770 - symbol:HDG8 "AT3G03260" species:3702... 155 8.2e-13 3
TAIR|locus:2062540 - symbol:HDG3 "AT2G32370" species:3702... 146 8.6e-13 3
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 153 2.0e-12 3
TAIR|locus:2030913 - symbol:HDG12 "homeodomain GLABROUS 1... 140 1.2e-11 3
TAIR|locus:2145116 - symbol:HDG7 "AT5G52170" species:3702... 138 2.5e-11 3
TAIR|locus:2167230 - symbol:HDG9 "AT5G17320" species:3702... 156 1.2e-10 3
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702... 115 4.1e-10 3
TAIR|locus:2023932 - symbol:HDG10 "AT1G34650" species:370... 135 4.3e-09 4
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 146 5.4e-07 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 137 6.3e-06 1
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 132 1.4e-05 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 132 2.0e-05 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 131 2.1e-05 1
RGD|2320224 - symbol:LOC100364841 "rCG53272-like" species... 108 5.3e-05 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 126 5.3e-05 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 123 0.00015 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 122 0.00016 1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 122 0.00020 1
TAIR|locus:2166434 - symbol:WOX7 "AT5G05770" species:3702... 101 0.00030 1
TAIR|locus:2131814 - symbol:FWA "AT4G25530" species:3702 ... 87 0.00039 3
UNIPROTKB|O13004 - symbol:GSC2 "Goosecoid 2" species:9031... 99 0.00049 1
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 118 0.00053 1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 114 0.00074 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 115 0.00075 1
FB|FBgn0002023 - symbol:Lim3 "Lim3" species:7227 "Drosoph... 121 0.00077 1
>TAIR|locus:2034086 [details] [associations]
symbol:ATHB-15 "AT1G52150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA;IMP]
[GO:0010014 "meristem initiation" evidence=RCA;IMP] [GO:0009887
"organ morphogenesis" evidence=RCA;IMP] [GO:0010073 "meristem
maintenance" evidence=RCA;TAS] [GO:0010075 "regulation of meristem
growth" evidence=RCA;IMP] [GO:0010087 "phloem or xylem
histogenesis" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] [GO:0080060 "integument development"
evidence=IGI] [GO:0006995 "cellular response to nitrogen
starvation" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009944 "polarity specification of adaxial/abaxial axis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010089 "xylem development" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009965 GO:GO:0010087 KO:K09338
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 GO:GO:0010075 GO:GO:0048263
EMBL:AC006216 GO:GO:0010014 IPI:IPI00545601 RefSeq:NP_849795.1
UniGene:At.11011 ProteinModelPortal:B3H4G8 SMR:B3H4G8 STRING:B3H4G8
PRIDE:B3H4G8 EnsemblPlants:AT1G52150.2 GeneID:841645
KEGG:ath:AT1G52150 OMA:EHVASMA Genevestigator:B3H4G8 Uniprot:B3H4G8
Length = 837
Score = 2607 (922.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 509/584 (87%), Positives = 541/584 (92%)
Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
LYA TTLAP RDFWLLRYTSVLEDGSLVVCERSLK+ QNGP+MP VQ+FVRAEML SGYL
Sbjct: 258 LYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEMLSSGYL 317
Query: 294 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQ- 352
IRPC+GGGSIIHIVDHMDLE SVPEVLRPLYES VLAQKTTMAALRQL+Q+AQEVTQ
Sbjct: 318 IRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQLKQIAQEVTQT 377
Query: 353 -SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLM 411
SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW+V+G D MDDVT+ VNSSPDKLM
Sbjct: 378 NSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-DSMDDVTITVNSSPDKLM 436
Query: 412 GLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKV 471
GLNL+FANGF VSN VLCAKASMLLQNVPPAILLRFLREHRSEWADNNID Y AAA+KV
Sbjct: 437 GLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAYLAAAVKV 496
Query: 472 GPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSG 531
GPCS +RVG FG QVILPLAHTIEHEEFMEVIKLEG+GHSPEDAI+PRD+FLLQLCSG
Sbjct: 497 GPCS---ARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDIFLLQLCSG 553
Query: 532 MDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGK-ETSSPNRTLDLASALEIG 590
MDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS K E SSPNRTLDLASALEIG
Sbjct: 554 MDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKQEVSSPNRTLDLASALEIG 613
Query: 591 PAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALS 650
AG +A+ + S NSTC RSVMTIAFEF ESHMQEHVA+MARQYVR IISSVQRVALALS
Sbjct: 614 SAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQYVRGIISSVQRVALALS 673
Query: 651 PSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAV 710
PS+ISSQ GLRTPLGTPEA TLARWIC SYR Y+GV+LLKS+S+G+ESILKNLWHHTDA+
Sbjct: 674 PSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSDGNESILKNLWHHTDAI 733
Query: 711 MCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFAC 770
+CCS+KALPVFTFANQAGLDMLETTLVALQDI+LEKIFDD+GRK L +EFPQIMQQGFAC
Sbjct: 734 ICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGFAC 793
Query: 771 LQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
LQGGICLSSMGRPVSYERAVAWKVLNEEE AHCICF+FINWSFV
Sbjct: 794 LQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV 837
Score = 1087 (387.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 207/228 (90%), Positives = 216/228 (94%)
Query: 1 MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
MAMSCKDGK G LDNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1 MAMSCKDGKLGCLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPK 60
Query: 61 QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV+EN YFRQH
Sbjct: 61 QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQH 120
Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
T + +L KDTSCESVVTSGQH L Q+P RDASPAGLLSIAEETL EFLSKATGTAVEW
Sbjct: 121 TPNPSLPAKDTSCESVVTSGQHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEW 180
Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP 228
VQMPGMKPGPDS+GI+AISHGC+GVAARACGLVGLEPTRVAEI+KDRP
Sbjct: 181 VQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRP 228
>TAIR|locus:2134088 [details] [associations]
symbol:HB-8 "AT4G32880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010089 "xylem development"
evidence=RCA;IMP] [GO:0045597 "positive regulation of cell
differentiation" evidence=IMP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0010014 "meristem initiation"
evidence=RCA;IMP] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA;IMP] [GO:0010067 "procambium
histogenesis" evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009880 "embryonic pattern specification" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016049
"cell growth" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042546 "cell wall biogenesis"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0048589 "developmental growth" evidence=RCA] [GO:0048765 "root
hair cell differentiation" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR001356 InterPro:IPR004827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00338 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0008284 GO:GO:0043565 GO:GO:0045597 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0010089 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 InterPro:IPR013978
Pfam:PF08670 EMBL:AL161582 EMBL:Z50851 EMBL:AJ441292 EMBL:AY099631
EMBL:BT008798 IPI:IPI00546637 PIR:T10695 RefSeq:NP_195014.1
UniGene:At.31628 ProteinModelPortal:Q39123 SMR:Q39123 IntAct:Q39123
STRING:Q39123 PaxDb:Q39123 PRIDE:Q39123 EnsemblPlants:AT4G32880.1
GeneID:829424 KEGG:ath:AT4G32880 TAIR:At4g32880 eggNOG:NOG325934
InParanoid:Q39123 OMA:DAVMCCS PhylomeDB:Q39123
Genevestigator:Q39123 GO:GO:0010067 Uniprot:Q39123
Length = 833
Score = 2280 (807.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 438/584 (75%), Positives = 509/584 (87%)
Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
LYA TTLAPARDFW+LRYTSV+EDGSLV+CERSL N QNGP+MPP HFVRAE+LPSGYL
Sbjct: 257 LYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGPSMPPSPHFVRAEILPSGYL 316
Query: 294 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQS 353
IRPCEGGGSI+HIVDH DLEPWSVPEVLR LYESST+LAQ+TTMAALR LRQ++QE++Q
Sbjct: 317 IRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRTTMAALRYLRQISQEISQP 376
Query: 354 SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGL 413
+V GWGRRPAALRALSQRLS+GFNEAVNGF+DEGW+++ +DG+DDVT+LVNSSP K+M
Sbjct: 377 NVTGWGRRPAALRALSQRLSKGFNEAVNGFSDEGWSILESDGIDDVTLLVNSSPTKMMMT 436
Query: 414 N-LSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVG 472
+ L FANG+ ++ +AVLCAKASMLLQNVPP+ILLRFLREHR EWADN+ID YSAAAIK G
Sbjct: 437 SSLPFANGYTSMPSAVLCAKASMLLQNVPPSILLRFLREHRQEWADNSIDAYSAAAIKAG 496
Query: 473 PCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGM 532
PCSLP R G+FG QVILPLAHTIE+EEFMEVIKLE +GH ED +MP D+FLLQ+CSG+
Sbjct: 497 PCSLPIPRPGSFGGQVILPLAHTIENEEFMEVIKLESLGHYQEDMMMPADIFLLQMCSGV 556
Query: 533 DENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPA 592
DENAV +CAELIFAPIDASF+DDAP++PSGFRIIPLDS E SPNRTLDLASAL++G
Sbjct: 557 DENAVESCAELIFAPIDASFSDDAPIIPSGFRIIPLDSKSEGLSPNRTLDLASALDVG-- 614
Query: 593 GNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPS 652
+R + + +SVMTIAF+ AFE HMQE+VA+MARQYVRS+I+SVQRVALALSPS
Sbjct: 615 -SRTAGDSCGSRGNSKSVMTIAFQLAFEMHMQENVASMARQYVRSVIASVQRVALALSPS 673
Query: 653 NISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMC 712
+ +GLR P +PEA TLARWI HSYRCYLGVDLLK G++ +LK+LWHH DAVMC
Sbjct: 674 S-HQLSGLRPPPASPEAHTLARWISHSYRCYLGVDLLKP--HGTD-LLKSLWHHPDAVMC 729
Query: 713 CSLKAL-PVFTFANQAGLDMLETTLVALQDITLEKIFDDH-GRKALFAEFPQIMQQGFAC 770
CSLKAL PVFTFANQAGLDMLETTLVALQDITL+KIFD++ G+K L +EFPQIMQQGF C
Sbjct: 730 CSLKALSPVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGKKTLSSEFPQIMQQGFMC 789
Query: 771 LQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
+ GGIC+SSMGR V+YE+AV WKVLN++E HCICFMF+NWSF+
Sbjct: 790 MDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNWSFI 833
Score = 1042 (371.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 197/218 (90%), Positives = 210/218 (96%)
Query: 12 SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRC 71
++DNGKYVRYTPEQVEALERLY++CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRC
Sbjct: 10 NMDNGKYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRC 69
Query: 72 REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST-TLATKD 130
REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN YFRQH Q+ LAT D
Sbjct: 70 REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSYFRQHPQNQGNLATTD 129
Query: 131 TSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGP 190
TSCESVVTSGQHHLTPQH PRDASPAGLLSIA+ETLTEF+SKATGTAVEWVQMPGMKPGP
Sbjct: 130 TSCESVVTSGQHHLTPQHQPRDASPAGLLSIADETLTEFISKATGTAVEWVQMPGMKPGP 189
Query: 191 DSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP 228
DS+GIVAISHGC+G+AARACGLVGL+PTRVAEILKD+P
Sbjct: 190 DSIGIVAISHGCTGIAARACGLVGLDPTRVAEILKDKP 227
>TAIR|locus:2061544 [details] [associations]
symbol:PHB "AT2G34710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0080060 "integument
development" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010182 "sugar mediated
signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010564 "regulation
of cell cycle process" evidence=RCA] [GO:0016049 "cell growth"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0033044 "regulation
of chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048589 "developmental growth" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0048825 "cotyledon development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
[GO:0009955 "adaxial/abaxial pattern specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC003096
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009944 KO:K09338 EMBL:Y11122 EMBL:AJ441291
EMBL:AY099791 EMBL:BT000335 IPI:IPI00538463 PIR:T01364
RefSeq:NP_181018.1 UniGene:At.37771 HSSP:P10037
ProteinModelPortal:O04291 SMR:O04291 IntAct:O04291 STRING:O04291
PaxDb:O04291 PRIDE:O04291 EnsemblPlants:AT2G34710.1 GeneID:818036
KEGG:ath:AT2G34710 TAIR:At2g34710 eggNOG:NOG264261
HOGENOM:HOG000272677 InParanoid:O04291 OMA:NRKLNAM PhylomeDB:O04291
ProtClustDB:CLSN2679470 Genevestigator:O04291 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 Uniprot:O04291
Length = 852
Score = 1876 (665.4 bits), Expect = 4.5e-286, Sum P(2) = 4.5e-286
Identities = 368/589 (62%), Positives = 453/589 (76%)
Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
+YA TTLA ARDFW LRY++ LEDGS VVCERSL + GPT PP +FVRAEM PSG+L
Sbjct: 271 MYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSLTSATGGPTGPPSSNFVRAEMKPSGFL 330
Query: 294 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQS 353
IRPC+GGGSI+HIVDH+DL+ WSVPEV+RPLYESS +LAQK T+AALR +RQ+AQE +
Sbjct: 331 IRPCDGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAALRHVRQIAQETSGE 390
Query: 354 SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGL 413
G GR+PA LR SQRL RGFN+AVNGF D+GW+ MG+DG +DVTV++N SP K G
Sbjct: 391 VQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMGSDGAEDVTVMINLSPGKFGGS 450
Query: 414 NLSFANGF-PAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVG 472
+ N F P+ + VLCAKASMLLQNVPPA+L+RFLREHRSEWAD +D Y+AA+++
Sbjct: 451 Q--YGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLREHRSEWADYGVDAYAAASLRAS 508
Query: 473 PCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSG 531
P ++P +R G F S QVILPLA T+EHEE +EV++LEG +SPED + RDM+LLQLCSG
Sbjct: 509 PFAVPCARAGGFPSNQVILPLAQTVEHEESLEVVRLEGHAYSPEDMGLARDMYLLQLCSG 568
Query: 532 MDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET---SSPNRTLDLASALE 588
+DEN VG CA+L+FAPID SFADDAPLLPSGFRIIPL+ K T +S NRTLDLASALE
Sbjct: 569 VDENVVGGCAQLVFAPIDESFADDAPLLPSGFRIIPLEQ-KSTPNGASANRTLDLASALE 627
Query: 589 IGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALA 648
R N RSV+TIAF+F F++H ++ VA+MARQYVRSI+ S+QRVALA
Sbjct: 628 ---GSTRQAGEADPNGCNFRSVLTIAFQFTFDNHSRDSVASMARQYVRSIVGSIQRVALA 684
Query: 649 LSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS-ESILKNLWHHT 707
++P S+ + + P +PEALTL RWI SY + G DL S S+ S +++L LW+H+
Sbjct: 685 IAPRPGSNISPISVPT-SPEALTLVRWISRSYSLHTGADLFGSDSQTSGDTLLHQLWNHS 743
Query: 708 DAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQ 765
DA++CCSLK A PVFTFANQ GLDMLETTLVALQDI L+K D+ GRKAL +EFP+IMQ
Sbjct: 744 DAILCCSLKTNASPVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQ 803
Query: 766 QGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
QG+A L G+C SSMGR VSYE+A WKVL ++E+ HC+ FMF+NWSFV
Sbjct: 804 QGYAHLPAGVCASSMGRMVSYEQATVWKVLEDDESNHCLAFMFVNWSFV 852
Score = 896 (320.5 bits), Expect = 4.5e-286, Sum P(2) = 4.5e-286
Identities = 177/231 (76%), Positives = 192/231 (83%)
Query: 3 MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
M ++ LD+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQI
Sbjct: 11 MMNRESPDKGLDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQI 70
Query: 63 KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
KVWFQNRRCREKQRKEA+RLQ VNRKL AMNKLLMEENDRLQKQVS LVYENG+ +
Sbjct: 71 KVWFQNRRCREKQRKEAARLQTVNRKLNAMNKLLMEENDRLQKQVSNLVYENGHMKHQLH 130
Query: 123 STTLATKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTA 177
+ + T D SCESVV SGQ H PQH RDA+ PAGLLSIAEE L EFLSKATGTA
Sbjct: 131 TASGTTTDNSCESVVVSGQQHQQQNPNPQHQQRDANNPAGLLSIAEEALAEFLSKATGTA 190
Query: 178 VEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP 228
V+WVQM GMKPGPDS+GIVAIS CSG+AARACGLV LEP +VAEILKDRP
Sbjct: 191 VDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLVSLEPMKVAEILKDRP 241
>TAIR|locus:2028140 [details] [associations]
symbol:PHV "AT1G30490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009943 "adaxial/abaxial axis specification"
evidence=IMP] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009880 "embryonic pattern
specification" evidence=IGI] [GO:0080060 "integument development"
evidence=IGI] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010051
"xylem and phloem pattern formation" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC009917
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009880 GO:GO:0009944 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 EMBL:Y10922 EMBL:AJ440967
EMBL:AK221046 EMBL:AK226570 IPI:IPI00523245 PIR:H86429
RefSeq:NP_174337.1 UniGene:At.27961 UniGene:At.33151
ProteinModelPortal:O04292 SMR:O04292 IntAct:O04292 STRING:O04292
PRIDE:O04292 EnsemblPlants:AT1G30490.1 GeneID:839928
KEGG:ath:AT1G30490 TAIR:At1g30490 eggNOG:NOG326783
InParanoid:O04292 OMA:ICRSYRI PhylomeDB:O04292
Genevestigator:O04292 Uniprot:O04292
Length = 841
Score = 1773 (629.2 bits), Expect = 7.6e-273, Sum P(2) = 7.6e-273
Identities = 355/590 (60%), Positives = 448/590 (75%)
Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
+YA TTLA ARDFW LRY++ LEDGS VVCERSL + GP P FVRA+ML SG+L
Sbjct: 267 IYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGPLSSSFVRAKMLSSGFL 326
Query: 294 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQS 353
IRPC+GGGSIIHIVDH+DL+ SVPEVLRPLYESS +LAQK T+AALR +RQ+AQE +
Sbjct: 327 IRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALRHVRQIAQETSGE 386
Query: 354 SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGL 413
GR+PA LR SQRL RGFN+AVNGF D+GW+ M +DG +D+T+++NSS K G
Sbjct: 387 VQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMSSDGGEDITIMINSSSAKFAGS 446
Query: 414 NLSFANGF-PAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVG 472
+ + F P+ + VLCAKASMLLQNVPP +L+RFLREHR+EWAD +D YSAA+++
Sbjct: 447 Q--YGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLREHRAEWADYGVDAYSAASLRAT 504
Query: 473 PCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSG 531
P ++P R G F S QVILPLA T+EHEEF+EV++L G +SPED + RDM+LLQLCSG
Sbjct: 505 PYAVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLGGHAYSPEDMGLSRDMYLLQLCSG 564
Query: 532 MDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD---SGKETSSPNRTLDLASALE 588
+DEN VG CA+L+FAPID SFADDAPLLPSGFR+IPLD + + S +RT DLAS+L+
Sbjct: 565 VDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPLDQKTNPNDHQSASRTRDLASSLD 624
Query: 589 IGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALA 648
G+ T++ TNS R V+TIAF+F F++H +++VATMARQYVR+++ S+QRVALA
Sbjct: 625 ----GSTKTDS-ETNS---RLVLTIAFQFTFDNHSRDNVATMARQYVRNVVGSIQRVALA 676
Query: 649 LSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE--GSESILKNLWHH 706
++P S Q L T +PEALTL RWI SY + G DL + S+ G +++LK LW H
Sbjct: 677 ITPRPGSMQ--LPT---SPEALTLVRWITRSYSIHTGADLFGADSQSCGGDTLLKQLWDH 731
Query: 707 TDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIM 764
+DA++CCSLK A PVFTFANQAGLDMLETTLVALQDI L+K DD GR+AL +EF +IM
Sbjct: 732 SDAILCCSLKTNASPVFTFANQAGLDMLETTLVALQDIMLDKTLDDSGRRALCSEFAKIM 791
Query: 765 QQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
QQG+A L GIC+SSMGRPVSYE+A WKV+++ E+ HC+ F ++WSFV
Sbjct: 792 QQGYANLPAGICVSSMGRPVSYEQATVWKVVDDNESNHCLAFTLVSWSFV 841
Score = 874 (312.7 bits), Expect = 7.6e-273, Sum P(2) = 7.6e-273
Identities = 171/232 (73%), Positives = 190/232 (81%)
Query: 2 AMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQ 61
+M +D D+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPIL NIEP+Q
Sbjct: 6 SMDDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQ 65
Query: 62 IKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHT 121
IKVWFQNRRCREKQRKE++RLQ VNRKL+AMNKLLMEENDRLQKQVS LVYENG+ +
Sbjct: 66 IKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVYENGFMKHRI 125
Query: 122 QSTTLATKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGT 176
+ + T D SCESVV SGQ T QHP RD + PA LLSIAEETL EFL KATGT
Sbjct: 126 HTASGTTTDNSCESVVVSGQQRQQQNPTHQHPQRDVNNPANLLSIAEETLAEFLCKATGT 185
Query: 177 AVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP 228
AV+WVQM GMKPGPDS+GIVA+S CSG+AARACGLV LEP +VAEILKDRP
Sbjct: 186 AVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRP 237
>TAIR|locus:2175856 [details] [associations]
symbol:REV "AT5G60690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0008289 "lipid binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0010014
"meristem initiation" evidence=RCA;IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA;IMP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA;IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA;IMP]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AB005246 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 GO:GO:0010051 GO:GO:0009855
GO:GO:0009944 KO:K09338 HSSP:P10037 ProtClustDB:CLSN2679470
InterPro:IPR013978 Pfam:PF08670 GO:GO:0009956 GO:GO:0010014
EMBL:AF188994 EMBL:AY170127 EMBL:AF233592 EMBL:AK229564
EMBL:EF598684 EMBL:EF598685 EMBL:EF598686 EMBL:EF598687
EMBL:EF598688 EMBL:EF598689 EMBL:EF598690 EMBL:EF598691
EMBL:EF598692 EMBL:EF598693 EMBL:EF598694 EMBL:EF598695
EMBL:EF598696 EMBL:EF598697 EMBL:EF598698 EMBL:EF598699
EMBL:EF598700 EMBL:EF598701 EMBL:EF598702 EMBL:EF598703
EMBL:EF598704 EMBL:EF598705 EMBL:EF598706 IPI:IPI00531930
RefSeq:NP_200877.1 UniGene:At.49201 UniGene:At.7238
ProteinModelPortal:Q9SE43 SMR:Q9SE43 STRING:Q9SE43 PaxDb:Q9SE43
PRIDE:Q9SE43 EnsemblPlants:AT5G60690.1 GeneID:836190
KEGG:ath:AT5G60690 TAIR:At5g60690 eggNOG:NOG323815
InParanoid:Q9M5B6 OMA:TIELVYM PhylomeDB:Q9SE43
Genevestigator:Q9SE43 Uniprot:Q9SE43
Length = 842
Score = 2590 (916.8 bits), Expect = 2.6e-269, P = 2.6e-269
Identities = 538/826 (65%), Positives = 633/826 (76%)
Query: 7 DGKTGSLDN-GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
D LD+ GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIREC IL+NIEPKQIKVW
Sbjct: 14 DSMNRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVW 73
Query: 66 FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
FQNRRCR+KQRKEASRLQ+VNRKL+AMNKLLMEENDRLQKQVSQLV ENGY +Q Q TT
Sbjct: 74 FQNRRCRDKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCENGYMKQ--QLTT 131
Query: 126 LATKDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
+ D SCESVVT TPQH RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMP
Sbjct: 132 VVN-DPSCESVVT------TPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMP 184
Query: 185 GMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP---------------- 228
GMKPGPDSVGI AIS C+GVAARACGLV LEP ++AEILKDRP
Sbjct: 185 GMKPGPDSVGIFAISQRCNGVAARACGLVSLEPMKIAEILKDRPSWFRDCRSLEVFTMFP 244
Query: 229 --RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQ 280
G I YA TTLAPARDFW LRYT+ L++GS VVCERSL GP
Sbjct: 245 AGNGGTIELVYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASAS 304
Query: 281 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL 340
FVRAEML SGYLIRPC+GGGSIIHIVDH++LE WSVP+VLRPLYESS V+AQK T++AL
Sbjct: 305 QFVRAEMLSSGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISAL 364
Query: 341 RQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVT 400
R +RQ+AQE V G GR+PA LR SQRLSRGFN+AVNGF D+GW+ M DG +D+
Sbjct: 365 RYIRQLAQESNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDII 424
Query: 401 VLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNN 460
V +NS+ K + N+S + F VLCAKASMLLQNVPPA+L+RFLREHRSEWAD N
Sbjct: 425 VAINST--KHLN-NISNSLSF---LGGVLCAKASMLLQNVPPAVLIRFLREHRSEWADFN 478
Query: 461 IDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
+D YSAA +K G + PG R F GSQ+I+PL HTIEHEE +EV++LEG + EDA M
Sbjct: 479 VDAYSAATLKAGSFAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFM 538
Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS--G--KETS 575
RD+ LLQ+C+G+DENAVG C+ELIFAPI+ F DDAPL+PSGFR+IP+D+ G ++
Sbjct: 539 SRDVHLLQICTGIDENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLL 598
Query: 576 SPN-RTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
+ N RTLDL S+LE+GP+ A+ N S +S+ R ++TIAF+F FE+++QE+VA MA QY
Sbjct: 599 TANHRTLDLTSSLEVGPSPENASGN-SFSSSSSRCILTIAFQFPFENNLQENVAGMACQY 657
Query: 635 VRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
VRS+ISSVQRVA+A+SPS IS G + G+PEA+TLA+WI SY +LG +LL S
Sbjct: 658 VRSVISSVQRVAMAISPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSELLTIDSL 717
Query: 695 GSE-SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGR 753
GS+ S+LK LW H DA++CCSLK PVF FANQAGLDMLETTLVALQDITLEKIFD+ GR
Sbjct: 718 GSDDSVLKLLWDHQDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGR 777
Query: 754 KALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE 799
KA+ ++F ++MQQGFACL GIC+S+MGR VSYE+AVAWKV E
Sbjct: 778 KAICSDFAKLMQQGFACLPSGICVSTMGRHVSYEQAVAWKVFAASE 823
Score = 1833 (650.3 bits), Expect = 4.3e-189, P = 4.3e-189
Identities = 368/592 (62%), Positives = 452/592 (76%)
Query: 235 YALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLI 294
YA TTLAPARDFW LRYT+ L++GS VVCERSL GP FVRAEML SGYLI
Sbjct: 259 YAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEMLSSGYLI 318
Query: 295 RPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSS 354
RPC+GGGSIIHIVDH++LE WSVP+VLRPLYESS V+AQK T++ALR +RQ+AQE
Sbjct: 319 RPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALRYIRQLAQESNGEV 378
Query: 355 VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD-KLMGL 413
V G GR+PA LR SQRLSRGFN+AVNGF D+GW+ M DG +D+ V +NS+ +
Sbjct: 379 VYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIVAINSTKHLNNISN 438
Query: 414 NLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGP 473
+LSF G VLCAKASMLLQNVPPA+L+RFLREHRSEWAD N+D YSAA +K G
Sbjct: 439 SLSFLGG-------VLCAKASMLLQNVPPAVLIRFLREHRSEWADFNVDAYSAATLKAGS 491
Query: 474 CSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGM 532
+ PG R F GSQ+I+PL HTIEHEE +EV++LEG + EDA M RD+ LLQ+C+G+
Sbjct: 492 FAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGI 551
Query: 533 DENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS--G--KETSSPN-RTLDLASAL 587
DENAVG C+ELIFAPI+ F DDAPL+PSGFR+IP+D+ G ++ + N RTLDL S+L
Sbjct: 552 DENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSL 611
Query: 588 EIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVAL 647
E+GP+ A+ N S +S+ R ++TIAF+F FE+++QE+VA MA QYVRS+ISSVQRVA+
Sbjct: 612 EVGPSPENASGN-SFSSSSSRCILTIAFQFPFENNLQENVAGMACQYVRSVISSVQRVAM 670
Query: 648 ALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE-SILKNLWHH 706
A+SPS IS G + G+PEA+TLA+WI SY +LG +LL S GS+ S+LK LW H
Sbjct: 671 AISPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSELLTIDSLGSDDSVLKLLWDH 730
Query: 707 TDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQ 766
DA++CCSLK PVF FANQAGLDMLETTLVALQDITLEKIFD+ GRKA+ ++F ++MQQ
Sbjct: 731 QDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAICSDFAKLMQQ 790
Query: 767 GFACLQGGICLSSMGRPVSYERAVAWKVL--NEEET--AHCICFMFINWSFV 814
GFACL GIC+S+MGR VSYE+AVAWKV +EE HC+ F F+NWSFV
Sbjct: 791 GFACLPSGICVSTMGRHVSYEQAVAWKVFAASEENNNNLHCLAFSFVNWSFV 842
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 165 (63.1 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 64/228 (28%), Positives = 100/228 (43%)
Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
L P R+ + +RY DG V + SL +++ P R+ PSG LI+ +
Sbjct: 382 LVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSP-------ITRSRRRPSGCLIQELQN 434
Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQS----- 353
G S + V+H++++ SV + +PL + K +A L RQ ++A + +
Sbjct: 435 GYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMASNIPACD 494
Query: 354 -SV--NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
SV + GR+ ++ L++R+ F V T WT + G DDV V+ S D
Sbjct: 495 LSVITSPEGRK--SMLKLAERMVMSFCTGVGASTAHAWTTLSTTGSDDVRVMTRKSMDD- 551
Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
G P VL A S + V P + FLR+ RSEW
Sbjct: 552 --------PGRPP--GIVLSAATSFWIP-VAPKRVFDFLRDENSRSEW 588
Score = 149 (57.5 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 36/98 (36%), Positives = 54/98 (55%)
Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
+Y R+T Q++ LE + ECP P +R++L RE LS +EP Q+K WFQN+R + K +
Sbjct: 65 RYHRHTQRQIQELESFFKECPHPDDKQRKELSRE---LS-LEPLQVKFWFQNKRTQMKAQ 120
Query: 77 KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
E N+ L + N L EN+R + +S N
Sbjct: 121 HERHE----NQILKSENDKLRAENNRYKDALSNATCPN 154
Score = 93 (37.8 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 554 DDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTI 613
D LLPSGF I+P D + + +E G GN +T +C S++T+
Sbjct: 663 DYVALLPSGFAILP-DGSARGGGGSANASAGAGVEGGGEGNNL-EVVTTTGSCGGSLLTV 720
Query: 614 AFEFAFESHMQEHVATMARQYVRSIIS-SVQRVALALS 650
AF+ +S ++ + V S+I +V+R+ AL+
Sbjct: 721 AFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAALA 758
Score = 49 (22.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 758 AEFPQIMQQGFACLQGGICLSSMGRP--VSYERAVAWKVLNEEE 799
A+ P I++ A ++ + ++ G P VS + +V ++LNEEE
Sbjct: 255 ADKPMIVELAVAAMEELVRMAQTGDPLWVSSDNSV--EILNEEE 296
Score = 48 (22.0 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 126 LATKDTSCESVVTSGQHHLTPQHPPRDASPAG---LLSIAEETLTEFLSKA-TGTAVEWV 181
+AT D CE + +S ++ SP G +L +AE + F + TA W
Sbjct: 472 VATLDRQCERLASSMASNIPACDLSVITSPEGRKSMLKLAERMVMSFCTGVGASTAHAWT 531
Query: 182 QMPGMKPGPDSVGIV 196
+ G D V ++
Sbjct: 532 TLS--TTGSDDVRVM 544
Score = 39 (18.8 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 287 MLPSGYLIRP---CEGGG 301
+LPSG+ I P GGG
Sbjct: 667 LLPSGFAILPDGSARGGG 684
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 185 (70.2 bits), Expect = 8.1e-23, Sum P(3) = 8.1e-23
Identities = 67/231 (29%), Positives = 107/231 (46%)
Query: 203 SGVAARACGLVGLEPTRVAEILKDRPRGSAILYALTT-LAPARDFWLLRYTSVLEDGSLV 261
SG+ +RA L L T VA + + + + L P R+ + +RY DGS
Sbjct: 336 SGIVSRALTLEVLS-TGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWA 394
Query: 262 VCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL 321
V + SL +++ P+ P +R PSG LI+ G S + ++HM+++ SV +
Sbjct: 395 VVDVSLDSLR--PSTP----ILRTRRRPSGCLIQELPNGYSKVTWIEHMEVDDRSVHNMY 448
Query: 322 RPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQS-----SV--NGWGRRPAALRALSQRLS 373
+PL +S K +A L RQ ++A + + SV + GR+ ++ L++R+
Sbjct: 449 KPLVQSGLAFGAKRWVATLERQCERLASSMASNIPGDLSVITSPEGRK--SMLKLAERMV 506
Query: 374 RGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSS---PDKLMGLNLSFANGF 421
F V T WT M G DDV V+ S P + G+ LS A F
Sbjct: 507 MSFCSGVGASTAHAWTTMSTTGSDDVRVMTRKSMDDPGRPPGIVLSAATSF 557
Score = 152 (58.6 bits), Expect = 8.1e-23, Sum P(3) = 8.1e-23
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
+Y R+T Q++ LE + ECP P +R++L R+ N+EP Q+K WFQN+R + K +
Sbjct: 65 RYHRHTQRQIQELESFFKECPHPDDKQRKELSRDL----NLEPLQVKFWFQNKRTQMKAQ 120
Query: 77 KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
E N+ L + N L EN+R ++ +S N
Sbjct: 121 SERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 154
Score = 61 (26.5 bits), Expect = 8.1e-23, Sum P(3) = 8.1e-23
Identities = 26/98 (26%), Positives = 43/98 (43%)
Query: 554 DDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTI 613
D LLPSGF I+P D N+ ++ S G G S++T+
Sbjct: 654 DYVALLPSGFAILP-DGSVGGGDGNQHQEMVSTTSSGSCGG--------------SLLTV 698
Query: 614 AFEFAFESHMQEHVATMARQYVRSIIS-SVQRVALALS 650
AF+ +S ++ + V S+I +V+R+ A+S
Sbjct: 699 AFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVS 736
Score = 41 (19.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 761 PQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE 799
P I++ A ++ + ++ G P+ + ++LNEEE
Sbjct: 249 PIIVELAVAAMEELVRMAQTGDPLWLSTDNSVEILNEEE 287
Score = 38 (18.4 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 287 MLPSGYLIRP--CEGGG 301
+LPSG+ I P GGG
Sbjct: 658 LLPSGFAILPDGSVGGG 674
>TAIR|locus:2207235 [details] [associations]
symbol:HDG2 "AT1G05230" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010090 "trichome morphogenesis" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0010090 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 eggNOG:NOG261733 ProtClustDB:CLSN2681990
EMBL:AC000098 EMBL:AY037177 EMBL:AY091690 IPI:IPI00530516
PIR:G86186 RefSeq:NP_001184911.1 RefSeq:NP_172015.1
RefSeq:NP_849596.1 UniGene:At.19179 UniGene:At.50922
ProteinModelPortal:Q94C37 SMR:Q94C37 STRING:Q94C37 PaxDb:Q94C37
PRIDE:Q94C37 EnsemblPlants:AT1G05230.1 EnsemblPlants:AT1G05230.2
EnsemblPlants:AT1G05230.4 GeneID:839256 KEGG:ath:AT1G05230
TAIR:At1g05230 InParanoid:Q94C37 OMA:VGVITNQ PhylomeDB:Q94C37
Genevestigator:Q94C37 Uniprot:Q94C37
Length = 721
Score = 153 (58.9 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
+Y R+T Q++ +E + ECP P +R+QL RE N+EP Q+K WFQN+R + K
Sbjct: 67 RYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSREL----NLEPLQVKFWFQNKRTQMKNH 122
Query: 75 -QRKEASRLQAVNRKL 89
+R E S L+A N KL
Sbjct: 123 HERHENSHLRAENEKL 138
Score = 153 (58.9 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 68/237 (28%), Positives = 103/237 (43%)
Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
SA + L P R+ + RY DGS V + SL ++Q P PP + RA S
Sbjct: 357 SAEFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQ--PN-PPARCRRRA----S 409
Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ---- 345
G LI+ G S + V+H++++ V + + + + K +A L RQ +
Sbjct: 410 GCLIQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASV 469
Query: 346 MAQEVTQSSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
MA ++ V N GRR ++ L++R+ F V+ T WT + G +DV V
Sbjct: 470 MATNISSGEVGVITNQEGRR--SMLKLAERMVISFCAGVSASTAHTWTTLSGTGAEDVRV 527
Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
+ S D G P VL A S + VPP + FLR+ R+EW
Sbjct: 528 MTRKSVDD---------PGRPP--GIVLSAATSFWIP-VPPKRVFDFLRDENSRNEW 572
Score = 52 (23.4 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 539 TCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
T + +I+AP+D D LLPSGF I+P D + +P
Sbjct: 623 TASFVIYAPVDIVAMNIVLNGGDPDYVALLPSGFAILP-DGNANSGAP 669
Score = 52 (23.4 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 73 EKQRKEASR---LQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATK 129
+KQRK+ SR L+ + K NK +N + + S L EN R A
Sbjct: 91 DKQRKQLSRELNLEPLQVKFWFQNKRTQMKNHHERHENSHLRAENEKLRNDNLRYREALA 150
Query: 130 DTSC 133
+ SC
Sbjct: 151 NASC 154
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 146 (56.5 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 33/86 (38%), Positives = 51/86 (59%)
Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREK- 74
+Y R+TP+Q++ LE ++ ECP P +R +L + C +E +Q+K WFQNRR + K
Sbjct: 137 RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
Query: 75 --QRKEASRLQAVNRKLTAMNKLLME 98
+R E + L+ N KL A N + E
Sbjct: 192 QLERHENALLRQENDKLRAENMSIRE 217
Score = 124 (48.7 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 62/237 (26%), Positives = 101/237 (42%)
Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
+A L L+ L P R+ LR+ +G V + S+ ++ PV +R LPS
Sbjct: 433 NAELQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSGGAPV---IRR--LPS 487
Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA-- 347
G +++ G S + V+H + + + ++ RPL S + +A L RQ +A
Sbjct: 488 GCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAIL 547
Query: 348 --QEVTQ---SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
VT +S+ GR+ ++ L+QR++ F ++ + W+ + +D DV V
Sbjct: 548 ISSSVTSHDNTSITPGGRK--SMLKLAQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVRV 605
Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS--EW 456
+ S D G P VL A S+ L P L FLR R EW
Sbjct: 606 MTRKSVDD---------PGEPP--GIVLSAATSVWLPAAPQR-LYDFLRNERMRCEW 650
Score = 59 (25.8 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 558 LLPSGFRIIP---LDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTI 613
LLPSGF ++P +D G R + S L + A NN T + SV T+
Sbjct: 727 LLPSGFAVLPDGGIDGGGSGDGDQRPVGGGSLLTV--AFQILVNNLPTAKLTVESVETV 783
Score = 53 (23.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 220 VAEILKDRPRGSAILYALTTLAPARDFWLLRYTSVLEDGSLVVCER----SLKNIQNGPT 275
+A I K + +G ++L + A +L+ T + G+LVV ++ + NG
Sbjct: 662 MAHITKGQDQGVSLLRSNAMNANQSSMLILQETCIDASGALVVYAPVDIPAMHVVMNGGD 721
Query: 276 MPPVQHFVRAEMLPSGYLIRP---CEGGGS 302
V +LPSG+ + P +GGGS
Sbjct: 722 SSYVA------LLPSGFAVLPDGGIDGGGS 745
>TAIR|locus:2098866 [details] [associations]
symbol:HDG1 "AT3G61150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL137898 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256
ProtClustDB:CLSN2685237 KO:K09338 EMBL:AJ224338 EMBL:AY050866
EMBL:AY096757 IPI:IPI00541112 PIR:T47907 RefSeq:NP_191674.1
UniGene:At.21209 HSSP:Q8C172 ProteinModelPortal:Q9M2E8 SMR:Q9M2E8
IntAct:Q9M2E8 PaxDb:Q9M2E8 PRIDE:Q9M2E8 EnsemblPlants:AT3G61150.1
GeneID:825287 KEGG:ath:AT3G61150 TAIR:At3g61150 eggNOG:NOG267226
InParanoid:Q9M2E8 OMA:HTEYDEN PhylomeDB:Q9M2E8
Genevestigator:Q9M2E8 Uniprot:Q9M2E8
Length = 808
Score = 147 (56.8 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
+Y R+TP+Q++ LE ++ EC P +R L R N++P+Q+K WFQNRR + K
Sbjct: 113 RYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRL----NLDPRQVKFWFQNRRTQMKTQ 168
Query: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
+R E + L+ N KL A N + E
Sbjct: 169 IERHENALLRQENDKLRAENMSVRE 193
Score = 105 (42.0 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 56/237 (23%), Positives = 96/237 (40%)
Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
A L L+ L P R LR+ +G V + S+ +I+ G + LPSG
Sbjct: 431 AELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS-------CRRLPSG 483
Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLR----QM 346
L++ G S + ++H + + + + RPL MAAL RQ M
Sbjct: 484 CLVQDMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILM 543
Query: 347 AQEVTQSS----VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
+ V+ S+ +N GR+ ++ L++R++ F V + + W+ + +D DV +
Sbjct: 544 SSTVSTSTNPSPINCNGRK--SMLKLAKRMTDNFCGGVCASSLQKWSKLNVGNVDEDVRI 601
Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHR--SEW 456
+ S + P ++ A+ + V P L FL R SEW
Sbjct: 602 MTRKSVNN------------PGEPPGIILNAATSVWMPVSPRRLFDFLGNERLRSEW 646
Score = 55 (24.4 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 39/137 (28%), Positives = 63/137 (45%)
Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDA-------SFADDA--PLLPSGFRIIPLDSGKE 573
M +LQ S +D A G A +++AP+D + D A LLPSGF I+P +G+
Sbjct: 686 MLILQETS-ID--AAG--AVVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILP--NGQ- 737
Query: 574 TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQ 633
+ R +A E GN S++T+AF+ S + + +
Sbjct: 738 -AGTQR----CAAEERNSIGNGGCMEEGG------SLLTVAFQILVNSLPTAKLTVESVE 786
Query: 634 YVRSIIS-SVQRVALAL 649
V ++IS +VQ++ AL
Sbjct: 787 TVNNLISCTVQKIKAAL 803
Score = 52 (23.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 45/211 (21%), Positives = 83/211 (39%)
Query: 353 SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVLVNSS---PD 408
S +N GR+ ++ L++R++ F V + + W+ + +D DV ++ S P
Sbjct: 554 SPINCNGRK--SMLKLAKRMTDNFCGGVCASSLQKWSKLNVGNVDEDVRIMTRKSVNNPG 611
Query: 409 KLMGLNLSFANG----------FPAVSNAVLCAKASMLLQNVPPAILLRFLREH-RSEWA 457
+ G+ L+ A F + N L ++ +L P + + H RS
Sbjct: 612 EPPGIILNAATSVWMPVSPRRLFDFLGNERLRSEWDILSNGGPMKEMAHIAKGHDRS--- 668
Query: 458 DNNIDVYSAAAIKVGPCS---LPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
N++ + A+AI S L + + G+ V+ + M V P
Sbjct: 669 -NSVSLLRASAINANQSSMLILQETSIDAAGAVVVYAPVDIPAMQAVMNGGDSAYVALLP 727
Query: 515 ED-AIMPRDMFLLQLCSGMDENAVGT--CAE 542
AI+P Q C+ + N++G C E
Sbjct: 728 SGFAILPNGQAGTQRCAAEERNSIGNGGCME 758
Score = 44 (20.5 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 23/83 (27%), Positives = 37/83 (44%)
Query: 220 VAEILK--DRPRGSAILYALTTLAPARDFWLLRYTSVLEDGSLVVCER----SLKNIQNG 273
+A I K DR ++L A A +L+ TS+ G++VV +++ + NG
Sbjct: 658 MAHIAKGHDRSNSVSLLRASAINANQSSMLILQETSIDAAGAVVVYAPVDIPAMQAVMNG 717
Query: 274 PTMPPVQHFVRAEMLPSGYLIRP 296
V +LPSG+ I P
Sbjct: 718 GDSAYVA------LLPSGFAILP 734
>TAIR|locus:2097770 [details] [associations]
symbol:HDG8 "AT3G03260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 EMBL:AC012328
EMBL:AK117867 IPI:IPI00538783 RefSeq:NP_186976.2 UniGene:At.41007
ProteinModelPortal:Q9M9P4 SMR:Q9M9P4 PRIDE:Q9M9P4
EnsemblPlants:AT3G03260.1 GeneID:821305 KEGG:ath:AT3G03260
TAIR:At3g03260 InParanoid:Q9M9P4 OMA:LNMESVA PhylomeDB:Q9M9P4
Genevestigator:Q9M9P4 Uniprot:Q9M9P4
Length = 699
Score = 155 (59.6 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 35/91 (38%), Positives = 51/91 (56%)
Query: 15 NGKYV--RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
NGK R+TP+Q++ LE + ECP P +R QL RE +EP QIK WFQN+R +
Sbjct: 22 NGKRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCREL----KLEPDQIKFWFQNKRTQ 77
Query: 73 EKQRKEASRLQAVNRKLTAMNKLLMEENDRL 103
K +++ S N L N+ L +N+ +
Sbjct: 78 SKTQEDRS----TNVLLRGENETLQSDNEAM 104
Score = 76 (31.8 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 37/155 (23%), Positives = 66/155 (42%)
Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLK-NIQNGPTMPPVQHFVRAEMLPSGY 292
L+ L+ L PAR+F ++R +E G ++ + S + N G + R PSG
Sbjct: 329 LHILSPLVPAREFMVVRCCQEIEKGIWIIADVSHRANFDFGNAAC----YKR----PSGC 380
Query: 293 LIRPCEGGGSIIHIVDHMDLE-PWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEV 350
LI+ S + ++H++++ ++ R L + K + L R +MA
Sbjct: 381 LIQALPDAHSKVMWIEHVEVDHKLDTHKIYRDLLSGGSGYGAKRWIVTLERMCERMALSS 440
Query: 351 TQ-------SSVNGWGRRPAALRALSQRLSRGFNE 378
Q S V G ++ L +R+ + FNE
Sbjct: 441 IQTLPPSDRSEVITTGEARRSVMKLGERMVKNFNE 475
Score = 70 (29.7 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 33/102 (32%), Positives = 51/102 (50%)
Query: 522 DMFLLQLCSGMDENAVGTCAELIFAPIDAS---FA-----DDA--PLLPSGFRIIPLDSG 571
DM +LQ C MD A+G +++AP+D + FA D + P+LPSGF +I D
Sbjct: 589 DMLMLQDCY-MD--ALG--GMIVYAPMDMATMHFAVSGEVDPSHIPILPSGF-VISSDGR 642
Query: 572 KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTI 613
+ T TL L A +I +G +A + N + +V +
Sbjct: 643 RSTVEDGGTL-LTVAFQILVSG-KANRSREVNEKSVDTVSAL 682
>TAIR|locus:2062540 [details] [associations]
symbol:HDG3 "AT2G32370" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048825 "cotyledon development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 KO:K09338 eggNOG:NOG261733 GO:GO:0048825
EMBL:AC005700 EMBL:EF988635 IPI:IPI00527257 PIR:C84732
RefSeq:NP_180796.2 UniGene:At.38083 ProteinModelPortal:Q9ZV65
SMR:Q9ZV65 PaxDb:Q9ZV65 PRIDE:Q9ZV65 EnsemblPlants:AT2G32370.1
GeneID:817798 KEGG:ath:AT2G32370 TAIR:At2g32370 InParanoid:A7LBA8
PhylomeDB:Q9ZV65 Genevestigator:Q9ZV65 Uniprot:Q9ZV65
Length = 725
Score = 146 (56.5 bits), Expect = 8.6e-13, Sum P(3) = 8.6e-13
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
KY R+T Q+ +E + ECP P +R L + ++P QIK WFQN+R + K +
Sbjct: 71 KYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQL----GLDPVQIKFWFQNKRTQNKNQ 126
Query: 77 KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ 109
+E R + N +L +N L EN RL++ + Q
Sbjct: 127 QE--RFE--NSELRNLNNHLRSENQRLREAIHQ 155
Score = 94 (38.1 bits), Expect = 8.6e-13, Sum P(3) = 8.6e-13
Identities = 54/238 (22%), Positives = 100/238 (42%)
Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
SA L+ L R+ + +RY +G V + S+ ++ +P + ++ PS
Sbjct: 364 SAEYQVLSPLVTTRESYFVRYCKQQGEGLWAVVDISIDHL-----LPNIN--LKCRRRPS 416
Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
G LI+ G S + V+H++++ + L + A + L RQ +++
Sbjct: 417 GCLIQEMHSGYSKVTWVEHVEVDDAGSYSIFEKLICTGQAFAANRWVGTLVRQCERISSI 476
Query: 350 VT---QSSVNG-----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM-GNDGMDDVT 400
++ QS +G ++ +++R++R F + T G T+ G +G +D+
Sbjct: 477 LSTDFQSVDSGDHITLTNHGKMSMLKIAERIARTFFAGMTNAT--GSTIFSGVEG-EDIR 533
Query: 401 VLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE--HRSEW 456
V+ S + G P ++CA S L PP + FLRE HR W
Sbjct: 534 VMTMKSVND---------PGKPP--GVIICAATSFWLP-APPNTVFDFLREATHRHNW 579
Score = 62 (26.9 bits), Expect = 8.6e-13, Sum P(3) = 8.6e-13
Identities = 21/86 (24%), Positives = 38/86 (44%)
Query: 539 TCAELIFAPIDASFADDA------P----LLPSGFRIIPLDSGKETSSPNR---TLDLAS 585
T + +++AP+D + D P +LPSGF I P +GK T+
Sbjct: 628 TASFVLYAPVDMTSMDITLHGGGDPDFVVILPSGFAIFPDGTGKPGGKEGGSLLTISFQM 687
Query: 586 ALEIGPAGNRATNNYSTNSTCMRSVM 611
+E GP + ++ +T +R+ +
Sbjct: 688 LVESGPEARLSVSSVATTENLIRTTV 713
Score = 38 (18.4 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 9/38 (23%), Positives = 23/38 (60%)
Query: 609 SVMTIAFEFAFESHMQEHVATMARQYVRSII-SSVQRV 645
S++TI+F+ ES + ++ + ++I ++V+R+
Sbjct: 679 SLLTISFQMLVESGPEARLSVSSVATTENLIRTTVRRI 716
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 153 (58.9 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 36/95 (37%), Positives = 51/95 (53%)
Query: 7 DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
DG +Y R+T +Q++ LE + ECP P +R QL RE + P+QIK WF
Sbjct: 25 DGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSREL----GLAPRQIKFWF 80
Query: 67 QNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 98
QNRR + K +R + S L+A N K+ N + E
Sbjct: 81 QNRRTQLKAQHERADNSALKAENDKIRCENIAIRE 115
Score = 99 (39.9 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 62/258 (24%), Positives = 98/258 (37%)
Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
L+ L R+F LRY E GS +V S +P ++ PSG LI+
Sbjct: 354 LSPLVATREFCELRYCQQTEQGSWIVVNVSYD-------LPQFVSHSQSYRFPSGCLIQD 406
Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALR---QLRQMAQEVTQS 353
G S + V+H++ E E++ LY ++ + A R L++M +
Sbjct: 407 MPNGYSKVTWVEHIETEE---KELVHELYRE--IIHRGIAFGADRWVTTLQRMCERFASL 461
Query: 354 SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGL 413
SV R LS R + TV+ + +G+
Sbjct: 462 SVPASSSRDLGGVILSPEGKRSMMRLAQRMISNYCLSVSRSNNTRSTVVSELNE---VGI 518
Query: 414 NLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS--EW--ADNNIDVYSAAAI 469
++ A+ P + VLCA + L N P + FL++ R+ +W N V A I
Sbjct: 519 RVT-AHKSPEPNGTVLCAATTFWLPNSPQNVF-NFLKDERTRPQWDVLSNGNAVQEVAHI 576
Query: 470 KVGPCSLPGSRVGTF-GS 486
G S PG+ + GS
Sbjct: 577 SNG--SHPGNCISVLRGS 592
Score = 46 (21.3 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 30/113 (26%), Positives = 47/113 (41%)
Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID------ASFADDA---PLLPSGFRII 566
+A +M +LQ S D + A ++++P+D A +D PLL SGF I
Sbjct: 593 NATHSNNMLILQE-SSTDSSG----AFVVYSPVDLAALNIAMSGEDPSYIPLLSSGFTIS 647
Query: 567 P------LDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTI 613
P + G ++S R S + +G +N T M SV T+
Sbjct: 648 PDGNGSNSEQGGASTSSGRASASGSLITVG--FQIMVSNLPTAKLNMESVETV 698
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 140 (54.3 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 31/85 (36%), Positives = 48/85 (56%)
Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
++ R+TP Q++ LE ++EC P +R QL RE + P+QIK WFQNRR ++K
Sbjct: 24 RFHRHTPHQIQRLESTFNECQHPDEKQRNQLSREL----GLAPRQIKFWFQNRRTQKKAQ 79
Query: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
+R + L+ N K+ N + E
Sbjct: 80 HERADNCALKEENDKIRCENIAIRE 104
Score = 100 (40.3 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 61/259 (23%), Positives = 106/259 (40%)
Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
L L+ L R+F +LRY +E G+ + S + P R+ PSG L
Sbjct: 331 LQVLSPLVTTREFCVLRYCQQIEHGTWAIVNVSYE-------FPQFISQSRSYRFPSGCL 383
Query: 294 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQ 352
I+ G S + V+H + E + E+ + + + +A L+++ + + +
Sbjct: 384 IQDMSNGYSKVTWVEHGEFEEQEPIHEMFKDIVHKGLAFGAERWIATLQRMCERFTNLLE 443
Query: 353 ---SSVNGWGRRPA-----ALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
SS++ G P+ ++ L+ R+ F +V + TV+ G+D+ + V
Sbjct: 444 PATSSLDLGGVIPSPEGKRSIMRLAHRMVSNFCLSVGTSNNTRSTVVS--GLDEFGIRVT 501
Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS--EW--ADNN 460
S + NG VLCA S L + P + FL++ R+ +W N
Sbjct: 502 SHKSR------HEPNGM------VLCAATSFWLP-ISPQNVFNFLKDERTRPQWDVLSNG 548
Query: 461 IDVYSAAAIKVGPCSLPGS 479
V A I G S PG+
Sbjct: 549 NSVQEVAHITNG--SNPGN 565
Score = 50 (22.7 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 522 DMFLLQLCSGMDENAVGTCAELIFAPID------ASFADDA---PLLPSGFRIIPLDSGK 572
+M +LQ S +D ++ A +I+ P+D A D P+LPSGF I P S K
Sbjct: 581 NMLILQE-SCIDSSSA---ALVIYTPVDLPALNIAMSGQDTSYIPILPSGFAISPDGSSK 636
Score = 50 (22.7 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 287 MLPSGYLIRP---CEGGGSIIHI 306
+LPSG+ I P +GGGS+I +
Sbjct: 622 ILPSGFAISPDGSSKGGGSLITV 644
>TAIR|locus:2145116 [details] [associations]
symbol:HDG7 "AT5G52170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 eggNOG:euNOG18333
HOGENOM:HOG000243256 HSSP:Q6B2C0 EMBL:AB025603 IPI:IPI00525258
RefSeq:NP_200030.1 UniGene:At.55500 ProteinModelPortal:Q9LTK3
SMR:Q9LTK3 EnsemblPlants:AT5G52170.1 GeneID:835293
KEGG:ath:AT5G52170 TAIR:At5g52170 InParanoid:Q9LTK3
PhylomeDB:Q9LTK3 Genevestigator:Q9LTK3 Uniprot:Q9LTK3
Length = 682
Score = 138 (53.6 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 34/85 (40%), Positives = 47/85 (55%)
Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
KY R+T Q++ LE + ECP P+ +R +L ++ +E KQIK WFQNRR + K
Sbjct: 60 KYHRHTSYQIQELESFFKECPHPNEKQRLELGKKL----TLESKQIKFWFQNRRTQMKTQ 115
Query: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
+R E L+ N KL N L E
Sbjct: 116 LERHENVILKQENEKLRLENSFLKE 140
Score = 97 (39.2 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 42/185 (22%), Positives = 74/185 (40%)
Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
++ L P + LRY DG V + S +I G ++ + ++M PSG +I+
Sbjct: 320 MSPLVPIKQKKFLRYCKQHGDGLWAVVDVSY-DINRGNEN--LKSYGGSKMFPSGCIIQD 376
Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSV 355
G S + ++H + E + +PL SS L +A L RQ ++
Sbjct: 377 IGNGCSKVTWIEHSEYEESHTHSLYQPLLSSSVGLGATKWLATLQRQCESFTMLLSSEDH 436
Query: 356 NGWGRRPA-ALRALSQRLSRGFNEAVNGFTDEGWT-VMGNDGMDDVTVLVNSSPDKLMGL 413
G ++ L+QR+ F + W ++ + D +L S + G+
Sbjct: 437 TGLSHAGTKSILKLAQRMKLNFYSGITASCIHKWEKLLAENVGQDTRILTRKSLEP-SGI 495
Query: 414 NLSFA 418
LS A
Sbjct: 496 VLSAA 500
Score = 52 (23.4 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 541 AELIFAPIDA-------SFADDA--PLLPSGFRIIPLDSGKETSS 576
A +++AP+D S D A LLPSGF I+P G +SS
Sbjct: 578 ALVVYAPVDIPSMNTVMSGGDSAYVALLPSGFSILP--DGSSSSS 620
>TAIR|locus:2167230 [details] [associations]
symbol:HDG9 "AT5G17320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AB005238 ProtClustDB:CLSN2679643
IPI:IPI00529269 RefSeq:NP_197234.1 UniGene:At.54882
ProteinModelPortal:Q9FFI0 SMR:Q9FFI0 EnsemblPlants:AT5G17320.1
GeneID:831598 KEGG:ath:AT5G17320 TAIR:At5g17320 eggNOG:KOG0493
InParanoid:Q9FFI0 PhylomeDB:Q9FFI0 Genevestigator:Q9FFI0
Uniprot:Q9FFI0
Length = 718
Score = 156 (60.0 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 38/106 (35%), Positives = 56/106 (52%)
Query: 7 DGKTGSLDNGK-YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
D T + K Y R+T EQ+ LE + ECP P +R+ L E N++PKQIK W
Sbjct: 18 DANTNNRHEKKGYHRHTNEQIHRLETYFKECPHPDEFQRRLLGEEL----NLKPKQIKFW 73
Query: 66 FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
FQN+R + K E +A N L A N + EN+ ++ ++ +V
Sbjct: 74 FQNKRTQAKSHNE----KADNAALRAENIKIRRENESMEDALNNVV 115
Score = 79 (32.9 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 52/231 (22%), Positives = 98/231 (42%)
Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERS--LKNIQNGPTMPPVQHFVRAEMLPSG 291
L+ L+ L P R+F +LR +ED ++ + S L NI+ + P PSG
Sbjct: 351 LHILSPLVPPREFMILRTCQQIEDNVWMIADVSCHLPNIEFDLSFPI------CTKRPSG 404
Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSV-PEVL-RPL-YESSTVLAQKTTMAALRQLRQMAQ 348
LI+ G S + ++H+ + V P L R L Y A++ T+ R ++
Sbjct: 405 VLIQALPHGFSKVTWIEHVVVNDNRVRPHKLYRDLLYGGFGYGARRWTVTLERTCERLIF 464
Query: 349 EVTQSSVNGWGRRPAALRALSQRLS-RGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
+ ++ P ++ + R S E + + W + + +D ++
Sbjct: 465 STSVPALPN-NDNPGVVQTIRGRNSVMHLGERM--LRNFAWMMKMVNKLDFSPQSETNNS 521
Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR--EHRSEW 456
+G+ ++ G P ++CA +S+ L +PP + FL+ E R +W
Sbjct: 522 GIRIGVRINNEAGQPP--GLIVCAGSSLSLP-LPPVQVYDFLKNLEVRHQW 569
Score = 45 (20.9 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 28/87 (32%), Positives = 42/87 (48%)
Query: 532 MDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD---SGKETSSPNRTLDLASALE 588
MD N CA I ID + P+LPSGF +I D S E + TL L A +
Sbjct: 628 MDLNTA--CAA-ISGDIDPT---TIPILPSGF-MISRDGRPSEGEAEGGSYTL-LTVAFQ 679
Query: 589 I---GPAGNRATNNYSTNSTCMRSVMT 612
I GP+ + TN ++T + ++++
Sbjct: 680 ILVSGPSYSPDTN-LEVSATTVNTLIS 705
Score = 42 (19.8 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 21/82 (25%), Positives = 37/82 (45%)
Query: 495 TIEH--EEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASF 552
+++H + F VI E + H + PR+ +L+ C +++N V A++ + F
Sbjct: 335 SVDHRGKTFSRVI-YEQL-HILSPLVPPREFMILRTCQQIEDN-VWMIADVSCHLPNIEF 391
Query: 553 ADDAPLL---PSGFRIIPLDSG 571
P+ PSG I L G
Sbjct: 392 DLSFPICTKRPSGVLIQALPHG 413
Score = 41 (19.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 607 MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPL-G 665
+R + + + A+ E V+ +QY + +V+ PSN +S + R L G
Sbjct: 130 LRHLQKLRAQNAYLKDEYERVSNYLKQYGGHSMHNVEATPYLHGPSNHASTSKNRPALYG 189
Query: 666 T 666
T
Sbjct: 190 T 190
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 18/72 (25%), Positives = 28/72 (38%)
Query: 136 VVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTA-VEW-VQMPGMKPGPDSV 193
V+ H L+P PPR+ E+ + + +E+ + P P V
Sbjct: 346 VIYEQLHILSPLVPPREFMILRTCQQIEDNVWMIADVSCHLPNIEFDLSFPICTKRPSGV 405
Query: 194 GIVAISHGCSGV 205
I A+ HG S V
Sbjct: 406 LIQALPHGFSKV 417
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 115 (45.5 bits), Expect = 4.1e-10, Sum P(3) = 4.1e-10
Identities = 44/171 (25%), Positives = 74/171 (43%)
Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
+Y R+T Q++ +E L+ E P + R +L ++ + P Q+K WFQN+R + K +
Sbjct: 91 RYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKL----GLSPIQVKFWFQNKRTQIKAQ 146
Query: 77 KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
+ S N KL A N+ L E+ +Q L ++ L + S+
Sbjct: 147 QSRSD----NAKLKAENETLKTESQNIQSNFQCLFCSTCGHNLRLENARLRQELDRLRSI 202
Query: 137 VT----SGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 183
V+ S +TP+ + +L IAEE + A A E +M
Sbjct: 203 VSMRNPSPSQEITPETNKNNND--NML-IAEEEKAIDMELAVSCARELAKM 250
Score = 106 (42.4 bits), Expect = 4.1e-10, Sum P(3) = 4.1e-10
Identities = 42/153 (27%), Positives = 72/153 (47%)
Query: 232 AILYALTTLAPARDFWLLRYTSV-LEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
A L ++ L P R+ + LRY E+G +V + + I+ Q+ R + PS
Sbjct: 351 AELQVVSPLVPTREAYFLRYVEQNAEEGKWMVVDFPIDRIKPASATTTDQY--RRK--PS 406
Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVP-EVLRPLYESSTVLAQKTTMAAL-RQLRQMAQ 348
G +I+ G S + V+H+++E V EV+R ES + ++ L RQ +MA
Sbjct: 407 GCIIQAMRNGYSQVTWVEHVEVEEKHVQDEVVREFVESGVAFGAERWLSVLKRQCERMAS 466
Query: 349 EVTQSSVNGWGRRPAA-----LRALSQRLSRGF 376
+ +++ G P+ L LSQR+ + F
Sbjct: 467 -LMATNITDLGVIPSVEARKNLMKLSQRMVKTF 498
Score = 56 (24.8 bits), Expect = 4.1e-10, Sum P(3) = 4.1e-10
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 555 DAPLLPSGFRIIPLD-----SGKETSSPNRTLDLA 584
+ PLLP GF ++P++ G SSP+ L +A
Sbjct: 633 EIPLLPVGFSVVPVNPSDGVEGSSVSSPSCLLTVA 667
>TAIR|locus:2023932 [details] [associations]
symbol:HDG10 "AT1G34650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 EMBL:AC007894 EMBL:AC023279
IPI:IPI00526139 PIR:B86470 RefSeq:NP_174724.1 UniGene:At.51941
ProteinModelPortal:Q9S9Z0 SMR:Q9S9Z0 EnsemblPlants:AT1G34650.1
GeneID:840369 KEGG:ath:AT1G34650 TAIR:At1g34650 InParanoid:Q9S9Z0
PhylomeDB:Q9S9Z0 ProtClustDB:CLSN2679643 Genevestigator:Q9S9Z0
Uniprot:Q9S9Z0
Length = 708
Score = 135 (52.6 bits), Expect = 4.3e-09, Sum P(4) = 4.3e-09
Identities = 30/87 (34%), Positives = 48/87 (55%)
Query: 13 LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
+D+ ++ QV+ LE +HECP P +R+QL E N++ KQIK WFQNRR +
Sbjct: 15 IDSNNRRHHSNHQVQRLEAFFHECPHPDDSQRRQLGNEL----NLKHKQIKFWFQNRRTQ 70
Query: 73 EKQRKEAS---RLQAVNRKLTAMNKLL 96
+ E + L+ N K+ +N+ +
Sbjct: 71 ARIHNEKADNIALRVENMKIRCVNEAM 97
Score = 82 (33.9 bits), Expect = 4.3e-09, Sum P(4) = 4.3e-09
Identities = 60/254 (23%), Positives = 106/254 (41%)
Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERS--LKNIQNGPTMPPVQHFVRAEMLPSG 291
L+ L+ L R+F +LR +++ ++ + S L+N++ T P PSG
Sbjct: 344 LHILSPLVLPREFIILRTCQQMKEDLWLIADVSCYLQNVEFESTAPI------CTKRPSG 397
Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPL-YESSTVLAQKTTMAALRQLRQMAQE 349
LI+ G S + ++H+++ P L R L Y A++ T L++M +
Sbjct: 398 VLIQALPHGRSKVTWIEHVEVTDKVWPHQLYRDLLYGGFGYGARRWTAT----LQRMCER 453
Query: 350 VTQSSVNGWGRR--PAALRALSQRLS-RGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSS 406
++ S+ + P ++ + R S E + + W + +D +D L S
Sbjct: 454 LSLYSMTDFPPTDYPGVVKTIEGRRSVMSLGERM--LKNFAWIMKMSDKLD----LPQQS 507
Query: 407 PDKLMGLNLSFANGFPAVS--NAVLCAKASMLLQNVPPAILLRFLR--EHRSEW---ADN 459
G+ +S A ++CA +S+ L +PP + FLR E R +W
Sbjct: 508 GANNSGVRISVRTNTEAGQPPGLIVCAGSSLSLP-LPPLQVYDFLRNLEVRHQWDVHCQG 566
Query: 460 NIDVYSAAAIKVGP 473
N V AA GP
Sbjct: 567 N-PVTEAARFVTGP 579
Score = 54 (24.1 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 512 HSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLL---PSGFRIIPL 568
H ++PR+ +L+ C M E+ + A++ + F AP+ PSG I L
Sbjct: 345 HILSPLVLPREFIILRTCQQMKED-LWLIADVSCYLQNVEFESTAPICTKRPSGVLIQAL 403
Query: 569 DSGK 572
G+
Sbjct: 404 PHGR 407
Score = 49 (22.3 bits), Expect = 4.3e-09, Sum P(4) = 4.3e-09
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 537 VGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS---GKETSSPNRTLDLASALEIGPAG 593
+ T I +D S P+LPSGF II DS E + TL L A +I G
Sbjct: 620 LNTAYSAISGQVDPS---TIPILPSGF-IISRDSHPSSSEVDGGSMTL-LTLAFQIFVTG 674
Query: 594 -NRATN-NYSTNSTCMRSVMTIAFE 616
+ T+ N ++T + ++++ A +
Sbjct: 675 PSYYTDLNLKDSATTVNTLVSSAVQ 699
Score = 40 (19.1 bits), Expect = 4.3e-09, Sum P(4) = 4.3e-09
Identities = 30/120 (25%), Positives = 52/120 (43%)
Query: 158 LLSIAEETLTEFLSKATGTAVEWVQ-MPGMKPGPDSVGIVA----ISHGCSGV-AARACG 211
+L E L+ +L+K G ++ V +P + GP + G + S+G S +
Sbjct: 131 ILKTEYERLSSYLTKHGGYSIPSVDALPDLH-GPSTYGSTSNNRPASYGSSSNHLPQQSS 189
Query: 212 LVGLEPTRVAEILKDRPRGSAILYA----LTTLAPARDFWLLRYTSVLEDGSLVVCERSL 267
L+ TR E++ P +L L+ L R F + + +V E SL+ E S+
Sbjct: 190 LLRRPFTR--ELINTTPLPKPVLLQHFQQLSQLEKNRMFEIAK-NAVAEVMSLIQMEHSM 246
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 146 (56.5 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 49/159 (30%), Positives = 77/159 (48%)
Query: 6 KDGKTGSLDNG-KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 64
+DG D+ K +R + EQ LE + E + ++ L ++ N+ +Q++V
Sbjct: 150 EDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQL----NLRTRQVEV 205
Query: 65 WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQ 122
WFQNRR R K ++ + + R N L +EN RLQK+VS+L + + + H +
Sbjct: 206 WFQNRRARTKLKQTEVDCEYLKR--CCEN--LTDENRRLQKEVSELRALKLSPHLYMHMK 261
Query: 123 STTLATKDTSCESV-VTSGQHHLTPQHPPRDASPAGLLS 160
T T SCE V VTS + P +SP G +S
Sbjct: 262 PPTTLTMCPSCERVAVTSSSSSVAPP-VMNSSSPMGPMS 299
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 137 (53.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 47/135 (34%), Positives = 69/135 (51%)
Query: 7 DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
D + GS K +R + +Q LE + E S++ +Q I L N+ P+Q++VWF
Sbjct: 182 DDENGS--TRKKLRLSKDQSAFLEDSFKE---HSTLNPKQKIALAKQL-NLRPRQVEVWF 235
Query: 67 QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQST 124
QNRR R K ++ + + R + L EEN RLQK+V +L + + F +T
Sbjct: 236 QNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTLKTSTPFYMQLPAT 291
Query: 125 TLATKDTSCESVVTS 139
TL T SCE V TS
Sbjct: 292 TL-TMCPSCERVATS 305
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/126 (30%), Positives = 65/126 (51%)
Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
K +R T +Q LE + + + ++Q L R+ N+ P+Q++VWFQNRR R K +
Sbjct: 113 KKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQL----NLRPRQVEVWFQNRRARTKLK 168
Query: 77 KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
+ + + + + L +EN RLQK++ +L + F H ++TL TK SCE
Sbjct: 169 QTEVDCEFLKKCC----ETLADENIRLQKEIQELKTLKLTQPFYMHMPASTL-TKCPSCE 223
Query: 135 SVVTSG 140
+ G
Sbjct: 224 RIGGGG 229
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 132 (51.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 44/136 (32%), Positives = 68/136 (50%)
Query: 6 KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
+DG G + K +R + +Q LE + E S++ +Q + L N+ +Q++VW
Sbjct: 153 EDGGNGD-GSRKKLRLSKDQALVLEETFKE---HSTLNPKQKLALAKQL-NLRARQVEVW 207
Query: 66 FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQS 123
FQNRR R K ++ + + R N L EEN RLQK+VS+L + + + H
Sbjct: 208 FQNRRARTKLKQTEVDCEYLKR--CCDN--LTEENRRLQKEVSELRALKLSPHLYMHMTP 263
Query: 124 TTLATKDTSCESVVTS 139
T T SCE V +S
Sbjct: 264 PTTLTMCPSCERVSSS 279
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 44/130 (33%), Positives = 64/130 (49%)
Query: 11 GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
GS K R EQV+ LE+ + K R+ QL R ++P+QI +WFQNRR
Sbjct: 79 GSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 134
Query: 71 CREKQRKEASRLQAVNRK---LTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA 127
R K ++ + R+ L A N LL N +LQ ++ L +N R+ T+S L
Sbjct: 135 ARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGL--KN---REQTESINL- 188
Query: 128 TKDT--SCES 135
K+T SC +
Sbjct: 189 NKETEGSCSN 198
>RGD|2320224 [details] [associations]
symbol:LOC100364841 "rCG53272-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:2320224 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00530000063899
IPI:IPI00959398 Ensembl:ENSRNOT00000035489 Uniprot:F1M524
Length = 96
Score = 108 (43.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 28/79 (35%), Positives = 39/79 (49%)
Query: 21 YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEAS 80
+T QVE +E L+ E P P + R +L R N+ ++KVWF NRR KQRK
Sbjct: 19 FTQWQVEEMENLFEETPYPDVLTRGELARTL----NVPEVKVKVWFSNRRA--KQRKNER 72
Query: 81 RLQAVNRKLTAMNKLLMEE 99
R N A + + M +
Sbjct: 73 RAMLRNMPSGAEDFIFMTD 91
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 126 (49.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 34/103 (33%), Positives = 54/103 (52%)
Query: 11 GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
GS K R EQ++ALE+ + K S R+ +L R ++P+QI +WFQNRR
Sbjct: 65 GSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARAL----GLQPRQIAIWFQNRR 120
Query: 71 CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
R K ++ + R+ ++ N++L +N +LQ QV L
Sbjct: 121 ARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMAL 163
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 46/150 (30%), Positives = 71/150 (47%)
Query: 11 GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
G + K +R + +Q LE + E +++ +Q + L N+ +Q++VWFQNRR
Sbjct: 124 GGETSRKKLRLSKDQSAFLEETFKE---HNTLNPKQKLALAKKL-NLTARQVEVWFQNRR 179
Query: 71 CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL---VYENGYFRQHTQSTTLA 127
R K ++ + + R + KL EEN RLQK+ +L ++ Q T TTL
Sbjct: 180 ARTKLKQTEVDCEYLKR---CVEKLT-EENRRLQKEAMELRTLKLSPQFYGQMTPPTTLI 235
Query: 128 TKDTSCESV--VTSGQHHLTPQHPPRDASP 155
SCE V +S HH H P +P
Sbjct: 236 MCP-SCERVGGPSSSNHH--HNHRPVSINP 262
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 38/157 (24%), Positives = 74/157 (47%)
Query: 3 MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
++ K K + + R++ EQ+++LE ++ + ++ QL RE ++P+Q+
Sbjct: 18 LTMKKMKKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLAREL----GLQPRQV 73
Query: 63 KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
+WFQN+R R K ++ + + + N L + + L+K+ LV E ++ TQ
Sbjct: 74 AIWFQNKRARWKSKQLETEYNILRQNYD--N--LASQFESLKKEKQALVSELQRLKEATQ 129
Query: 123 STTLATKDTSC---ESVVT-SGQHHLTPQHPPRDASP 155
T ++ C ++VV S HH + R P
Sbjct: 130 KKT-QEEERQCSGDQAVVALSSTHHESENEENRRRKP 165
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 39/126 (30%), Positives = 62/126 (49%)
Query: 14 DNG-KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
DN K +R + +Q LE + + + ++Q L ++ + +Q++VWFQNRR R
Sbjct: 125 DNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQL----GLRARQVEVWFQNRRAR 180
Query: 73 EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKD 130
K ++ + + R N L EEN RLQK+V++L + + F H T T
Sbjct: 181 TKLKQTEVDCEFLRR--CCEN--LTEENRRLQKEVTELRALKLSPQFYMHMSPPTTLTMC 236
Query: 131 TSCESV 136
SCE V
Sbjct: 237 PSCEHV 242
>TAIR|locus:2166434 [details] [associations]
symbol:WOX7 "AT5G05770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB005237
eggNOG:NOG241769 EMBL:AB493739 IPI:IPI00518458 RefSeq:NP_196196.1
UniGene:At.54734 ProteinModelPortal:Q9FFK0 SMR:Q9FFK0
EnsemblPlants:AT5G05770.1 GeneID:830462 KEGG:ath:AT5G05770
TAIR:At5g05770 InParanoid:Q9FFK0 PhylomeDB:Q9FFK0
Genevestigator:Q9FFK0 Uniprot:Q9FFK0
Length = 122
Score = 101 (40.6 bits), Expect = 0.00030, P = 0.00030
Identities = 28/94 (29%), Positives = 49/94 (52%)
Query: 5 CKDGKTGSLDNGKYVRYTP--EQVEALERLYHECPK-PSSIRRQQLIRECPILSNIEPKQ 61
C + G K R+ P EQV+ L L+ + PS+ + Q++ E IE K
Sbjct: 14 CNNNNGGGGTGAKCGRWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKN 73
Query: 62 IKVWFQNRRCREKQR-KEASRLQAVNRKLTAMNK 94
+ WFQN + RE+Q+ ++ S ++ +R+ T ++K
Sbjct: 74 VFYWFQNHKARERQKCRKISTVKFDHRQDTDLSK 107
>TAIR|locus:2131814 [details] [associations]
symbol:FWA "AT4G25530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEP] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009909 "regulation of flower development" evidence=IEP;RCA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] [GO:0009911
"positive regulation of flower development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0007275
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AL022197 EMBL:AL161563
Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009911 GO:GO:0031047 HOGENOM:HOG000243256
GO:GO:0006349 EMBL:AF178688 EMBL:AF243535 IPI:IPI00545721
PIR:A85295 RefSeq:NP_567722.1 UniGene:At.2139
ProteinModelPortal:Q9FVI6 SMR:Q9FVI6 IntAct:Q9FVI6 STRING:Q9FVI6
PaxDb:Q9FVI6 PRIDE:Q9FVI6 EnsemblPlants:AT4G25530.1 GeneID:828658
KEGG:ath:AT4G25530 TAIR:At4g25530 eggNOG:NOG295539
InParanoid:Q9FVI6 PhylomeDB:Q9FVI6 Genevestigator:Q9FVI6
GermOnline:AT4G25530 Uniprot:Q9FVI6
Length = 686
Score = 87 (35.7 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 31/91 (34%), Positives = 42/91 (46%)
Query: 20 RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
R T Q + LE Y E P P+ +R +L + N+ Q+K WFQN+R EK +
Sbjct: 46 RRTAYQTQELENFYMENPHPTEEQRYELGQRL----NMGVNQVKNWFQNKRNLEKINND- 100
Query: 80 SRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
L+ N L EE+DRL QL
Sbjct: 101 -HLE---------NVTLREEHDRLLATQDQL 121
Score = 85 (35.0 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 42/191 (21%), Positives = 83/191 (43%)
Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
++ L P R +RY + G VV + + QN PT+ P + ++ LPSG +I
Sbjct: 333 ISPLVPKRKVTFIRYCKEIRQGLWVVVD--VTPTQN-PTLLP---YGCSKRLPSGLIIDD 386
Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVN 356
G S + ++ + + ++ +PL L K +A L+ R T SS N
Sbjct: 387 LSNGYSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQ--RHCESLSTLSSTN 444
Query: 357 ------GWGRRPAA-LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM-DDVTVLVNSS-- 406
G + A + L+QR++ + + + + W + + + +++ ++ +
Sbjct: 445 LTEISPGLSAKGATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENVAQNMSFMIRKNVN 504
Query: 407 -PDKLMGLNLS 416
P +L G+ LS
Sbjct: 505 EPGELTGIVLS 515
Score = 46 (21.3 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 553 ADDAPLLPSGFRIIP 567
+D LPSGF I+P
Sbjct: 611 SDSVKFLPSGFSIVP 625
>UNIPROTKB|O13004 [details] [associations]
symbol:GSC2 "Goosecoid 2" species:9031 "Gallus gallus"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
eggNOG:NOG244876 HOGENOM:HOG000112823 OrthoDB:EOG4RFKV2
GeneTree:ENSGT00700000104273 EMBL:AADN02043256 EMBL:Y09850
IPI:IPI00821873 Ensembl:ENSGALT00000038540 InParanoid:O13004
Uniprot:O13004
Length = 61
Score = 99 (39.9 bits), Expect = 0.00049, P = 0.00049
Identities = 19/57 (33%), Positives = 36/57 (63%)
Query: 21 YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
+T EQ++ALE L+H+ P I R+ L +++ ++++VWF+NRR + + +K
Sbjct: 8 FTEEQLQALETLFHQNQYPDVITREHLANRI----HLKEERVEVWFKNRRAKWRHQK 60
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 40/128 (31%), Positives = 63/128 (49%)
Query: 17 KYVRYTPEQVEALERLY--HECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
K +R T +Q LE + H P ++Q L R+ N+ P+Q++VWFQNRR R K
Sbjct: 126 KKLRLTKQQSALLEDNFKLHSTLNPK--QKQALARQL----NLRPRQVEVWFQNRRARTK 179
Query: 75 QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTS 132
++ + + + + L +EN RLQK++ L + + F H + TL T S
Sbjct: 180 LKQTEVDCEFLKKCC----ETLTDENRRLQKELQDLKALKLSQPFYMHMPAATL-TMCPS 234
Query: 133 CESVVTSG 140
CE + G
Sbjct: 235 CERLGGGG 242
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 114 (45.2 bits), Expect = 0.00074, P = 0.00074
Identities = 35/107 (32%), Positives = 53/107 (49%)
Query: 8 GKTGSLDNGKYV----RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
G S D G + + T EQV LE + + K S R+ +L E ++P+Q+
Sbjct: 42 GSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAEL----GLDPRQVA 97
Query: 64 VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
VWFQNRR R K + RL+ KL + ++ + RL+ +V QL
Sbjct: 98 VWFQNRRARWKNK----RLEEEYNKLKNSHDNVVVDKCRLESEVIQL 140
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 115 (45.5 bits), Expect = 0.00075, P = 0.00075
Identities = 36/127 (28%), Positives = 65/127 (51%)
Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
K R T Q+ +LER + E K S R+ +L RE ++P+QI VWFQNRR R K +
Sbjct: 77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWKAK 132
Query: 77 KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLAT---KDT-S 132
+ ++ ++ +++ +D ++K + L+ + G ++ + T+ +DT
Sbjct: 133 QLEQLYDSLRQEYDVVSREKQMLHDEVKK-LRALLRDQGLIKKQISAGTIKVSGEEDTVE 191
Query: 133 CESVVTS 139
SVV +
Sbjct: 192 ISSVVVA 198
>FB|FBgn0002023 [details] [associations]
symbol:Lim3 "Lim3" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007399 "nervous system
development" evidence=TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 HSSP:P50480 FlyBase:FBgn0002023
EMBL:BT003469 ProteinModelPortal:Q86P58 SMR:Q86P58 IntAct:Q86P58
STRING:Q86P58 PRIDE:Q86P58 InParanoid:Q86P58 ArrayExpress:Q86P58
Bgee:Q86P58 Uniprot:Q86P58
Length = 523
Score = 121 (47.7 bits), Expect = 0.00077, P = 0.00077
Identities = 48/161 (29%), Positives = 81/161 (50%)
Query: 11 GSLDN---GKYVR--YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
GSLD K R T +Q+E L+ Y+ PKP+ R+QL ++ + ++ + ++VW
Sbjct: 251 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 306
Query: 66 FQNRRCREKQ-RKEASRLQAVNRKLTAMNKLLMEENDR-LQKQVSQLVYENGYFRQHTQS 123
FQNRR +EK+ +K+A R + ++ +M D+ L K ++ Y++ F H S
Sbjct: 307 FQNRRAKEKRLKKDAGRTRW-SQYFRSMKGNCSPRTDKFLDKDELKVDYDS--FSHHDLS 363
Query: 124 T-TLAT------KDTSCESVVTSGQH-HLTP-QHPPRDASP 155
+ +T + S S+ S H +P Q+PP SP
Sbjct: 364 NDSYSTVNLGLDEGASPHSIRGSYMHGSSSPSQYPPSSRSP 404
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 814 814 0.00099 121 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 629 (67 KB)
Total size of DFA: 415 KB (2200 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 71.53u 0.17s 71.70t Elapsed: 00:00:03
Total cpu time: 71.54u 0.17s 71.71t Elapsed: 00:00:03
Start: Tue May 21 02:17:35 2013 End: Tue May 21 02:17:38 2013