BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048771
         (814 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255549852|ref|XP_002515977.1| DNA binding protein, putative [Ricinus communis]
 gi|223544882|gb|EEF46397.1| DNA binding protein, putative [Ricinus communis]
          Length = 839

 Score = 1564 bits (4049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 751/839 (89%), Positives = 784/839 (93%), Gaps = 25/839 (2%)

Query: 1   MAMSCKDGKT-GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           MAMSCKDGK   +LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQ IRECPILSNIEP
Sbjct: 1   MAMSCKDGKQPANLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQFIRECPILSNIEP 60

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 119
           KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ
Sbjct: 61  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 120

Query: 120 HTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 179
           HTQ+TTLATKDTSC+SVVTSGQHHLTPQH PRDASPAGLLSIAEETLTEFLSKATGTAVE
Sbjct: 121 HTQNTTLATKDTSCDSVVTSGQHHLTPQHQPRDASPAGLLSIAEETLTEFLSKATGTAVE 180

Query: 180 WVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP----------- 228
           WVQMPGMKPGPDS+GI+AISHGC+GVAARACGLVGLEPTRVAEILKDRP           
Sbjct: 181 WVQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDV 240

Query: 229 -------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPT 275
                   G  I      LYA TTLAPARDFWLLRYTSVLEDGSLV+CERSLKN QNGP+
Sbjct: 241 LNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPS 300

Query: 276 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 335
           MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT
Sbjct: 301 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 360

Query: 336 TMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDG 395
           TMAALRQLRQ+AQE +QS+V  WGRRPAALRALSQRLSRGFNEA+NGFTDEGW++MGNDG
Sbjct: 361 TMAALRQLRQIAQEASQSNVTNWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDG 420

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSE 455
           MDDVT+LVNSSP+KLMGLNLSF+NGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSE
Sbjct: 421 MDDVTILVNSSPEKLMGLNLSFSNGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSE 480

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           WADNNID YSAAAIKVGPC+LPG+R+G+FG QVILPLAHTIEHEEF+EVIKLEG GHSPE
Sbjct: 481 WADNNIDAYSAAAIKVGPCTLPGTRIGSFGGQVILPLAHTIEHEEFLEVIKLEGAGHSPE 540

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS 575
           D IMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS KE S
Sbjct: 541 DPIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEAS 600

Query: 576 SPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYV 635
           SPNRTLDLASALEIGPAGN+++ +YS+NS CMRSVMTIAFEFAFESHMQEHVA+MARQYV
Sbjct: 601 SPNRTLDLASALEIGPAGNKSSTDYSSNSGCMRSVMTIAFEFAFESHMQEHVASMARQYV 660

Query: 636 RSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEG 695
           RSIISSVQRVALALSPS+  S AGLRTPLGTPEA TLARWIC SYRCYLGV+LLKSSSEG
Sbjct: 661 RSIISSVQRVALALSPSHSGSHAGLRTPLGTPEAQTLARWICQSYRCYLGVELLKSSSEG 720

Query: 696 SESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKA 755
            ESILK LWHH+DA+MCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 
Sbjct: 721 GESILKTLWHHSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKT 780

Query: 756 LFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           L +EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE AHCICFMFINWSFV
Sbjct: 781 LCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFMFINWSFV 839


>gi|225442501|ref|XP_002284003.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 1
           [Vitis vinifera]
          Length = 837

 Score = 1561 bits (4041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 753/838 (89%), Positives = 787/838 (93%), Gaps = 25/838 (2%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MAMSCKDGK G +DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MAMSCKDGK-GIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 59

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH
Sbjct: 60  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 119

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           TQ+TTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW
Sbjct: 120 TQNTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 179

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQMPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPTRVAEILKDRP            
Sbjct: 180 VQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVL 239

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I      LYA TTLAPARDFWLLRYTSV+EDGSLVVCERSLKN QNGP+M
Sbjct: 240 NVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSM 299

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT
Sbjct: 300 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 359

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           MAALRQLRQ+AQEV+QS+V GWGRRPAALRALSQRLSRGFNEA+NGFTDEGW++MGNDG+
Sbjct: 360 MAALRQLRQIAQEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGI 419

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           DDVT+LVNSSP+KL GLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW
Sbjct: 420 DDVTILVNSSPEKLTGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 479

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
           ADNNID YSAAA+KVGPCSLPGSRVG+FGSQVILPLAHTIEHEEF+EVIKLEGVGH PED
Sbjct: 480 ADNNIDAYSAAAVKVGPCSLPGSRVGSFGSQVILPLAHTIEHEEFLEVIKLEGVGHCPED 539

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSS 576
           A+MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE SS
Sbjct: 540 AMMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASS 599

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
           PNRTLDLASALEIGPAGNR++N+YS N    RSVMTIAFEFAFESH+QE+VA+MARQYVR
Sbjct: 600 PNRTLDLASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFAFESHLQENVASMARQYVR 659

Query: 637 SIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS 696
           SIISSVQRVALALSPS++SS AGLR PLGTPEA TLARWI HSYRCYLGV+LLKSS EGS
Sbjct: 660 SIISSVQRVALALSPSHLSSHAGLRPPLGTPEAHTLARWISHSYRCYLGVELLKSSGEGS 719

Query: 697 ESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKAL 756
           E+ILK LWH +DA+MCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK L
Sbjct: 720 ETILKTLWHLSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKTL 779

Query: 757 FAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            +EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE AHC+CFMF+NWSFV
Sbjct: 780 CSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCVCFMFMNWSFV 837


>gi|297743212|emb|CBI36079.3| unnamed protein product [Vitis vinifera]
          Length = 835

 Score = 1556 bits (4030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 751/836 (89%), Positives = 785/836 (93%), Gaps = 25/836 (2%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           MSCKDGK G +DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI
Sbjct: 1   MSCKDGK-GIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 59

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ
Sbjct: 60  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 119

Query: 123 STTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           +TTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ
Sbjct: 120 NTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 179

Query: 183 MPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------------- 228
           MPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPTRVAEILKDRP              
Sbjct: 180 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNV 239

Query: 229 ----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPP 278
                G  I      LYA TTLAPARDFWLLRYTSV+EDGSLVVCERSLKN QNGP+MPP
Sbjct: 240 LPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPP 299

Query: 279 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA 338
           VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA
Sbjct: 300 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA 359

Query: 339 ALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD 398
           ALRQLRQ+AQEV+QS+V GWGRRPAALRALSQRLSRGFNEA+NGFTDEGW++MGNDG+DD
Sbjct: 360 ALRQLRQIAQEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGIDD 419

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 458
           VT+LVNSSP+KL GLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD
Sbjct: 420 VTILVNSSPEKLTGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 479

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
           NNID YSAAA+KVGPCSLPGSRVG+FGSQVILPLAHTIEHEEF+EVIKLEGVGH PEDA+
Sbjct: 480 NNIDAYSAAAVKVGPCSLPGSRVGSFGSQVILPLAHTIEHEEFLEVIKLEGVGHCPEDAM 539

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPN 578
           MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE SSPN
Sbjct: 540 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPN 599

Query: 579 RTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSI 638
           RTLDLASALEIGPAGNR++N+YS N    RSVMTIAFEFAFESH+QE+VA+MARQYVRSI
Sbjct: 600 RTLDLASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFAFESHLQENVASMARQYVRSI 659

Query: 639 ISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSES 698
           ISSVQRVALALSPS++SS AGLR PLGTPEA TLARWI HSYRCYLGV+LLKSS EGSE+
Sbjct: 660 ISSVQRVALALSPSHLSSHAGLRPPLGTPEAHTLARWISHSYRCYLGVELLKSSGEGSET 719

Query: 699 ILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFA 758
           ILK LWH +DA+MCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK L +
Sbjct: 720 ILKTLWHLSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKTLCS 779

Query: 759 EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE AHC+CFMF+NWSFV
Sbjct: 780 EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCVCFMFMNWSFV 835


>gi|225442503|ref|XP_002284014.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 3
           [Vitis vinifera]
          Length = 854

 Score = 1551 bits (4015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 753/855 (88%), Positives = 787/855 (92%), Gaps = 42/855 (4%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MAMSCKDGK G +DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MAMSCKDGK-GIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 59

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH
Sbjct: 60  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 119

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           TQ+TTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW
Sbjct: 120 TQNTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 179

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQMPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPTRVAEILKDRP            
Sbjct: 180 VQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVL 239

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I      LYA TTLAPARDFWLLRYTSV+EDGSLVVCERSLKN QNGP+M
Sbjct: 240 NVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSM 299

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT
Sbjct: 300 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 359

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           MAALRQLRQ+AQEV+QS+V GWGRRPAALRALSQRLSRGFNEA+NGFTDEGW++MGNDG+
Sbjct: 360 MAALRQLRQIAQEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGI 419

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQ-----------------N 439
           DDVT+LVNSSP+KL GLNLSFANGFPAVSNAVLCAKASMLLQ                 N
Sbjct: 420 DDVTILVNSSPEKLTGLNLSFANGFPAVSNAVLCAKASMLLQVSFISCSDVLFTIYHFQN 479

Query: 440 VPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHE 499
           VPPAILLRFLREHRSEWADNNID YSAAA+KVGPCSLPGSRVG+FGSQVILPLAHTIEHE
Sbjct: 480 VPPAILLRFLREHRSEWADNNIDAYSAAAVKVGPCSLPGSRVGSFGSQVILPLAHTIEHE 539

Query: 500 EFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLL 559
           EF+EVIKLEGVGH PEDA+MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLL
Sbjct: 540 EFLEVIKLEGVGHCPEDAMMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLL 599

Query: 560 PSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAF 619
           PSGFRIIPLDSGKE SSPNRTLDLASALEIGPAGNR++N+YS N    RSVMTIAFEFAF
Sbjct: 600 PSGFRIIPLDSGKEASSPNRTLDLASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFAF 659

Query: 620 ESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHS 679
           ESH+QE+VA+MARQYVRSIISSVQRVALALSPS++SS AGLR PLGTPEA TLARWI HS
Sbjct: 660 ESHLQENVASMARQYVRSIISSVQRVALALSPSHLSSHAGLRPPLGTPEAHTLARWISHS 719

Query: 680 YRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVAL 739
           YRCYLGV+LLKSS EGSE+ILK LWH +DA+MCCSLKALPVFTFANQAGLDMLETTLVAL
Sbjct: 720 YRCYLGVELLKSSGEGSETILKTLWHLSDAIMCCSLKALPVFTFANQAGLDMLETTLVAL 779

Query: 740 QDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE 799
           QDITLEKIFDDHGRK L +EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE
Sbjct: 780 QDITLEKIFDDHGRKTLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE 839

Query: 800 TAHCICFMFINWSFV 814
            AHC+CFMF+NWSFV
Sbjct: 840 NAHCVCFMFMNWSFV 854


>gi|444436435|gb|AGE09585.1| HB1-like protein [Eucalyptus cladocalyx]
          Length = 844

 Score = 1542 bits (3992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 741/844 (87%), Positives = 783/844 (92%), Gaps = 30/844 (3%)

Query: 1   MAMSCKDGKTG------SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPIL 54
           MA SCKDGK G      SLDNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPIL
Sbjct: 1   MATSCKDGKLGHSNSSNSLDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPIL 60

Query: 55  SNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
           SNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN
Sbjct: 61  SNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 120

Query: 115 GYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKAT 174
           GYFRQHTQ+TTLATKDTSCESVVTSGQH LT QHPPRDASPAGLLSIAEETL EFLSKAT
Sbjct: 121 GYFRQHTQNTTLATKDTSCESVVTSGQHQLTSQHPPRDASPAGLLSIAEETLAEFLSKAT 180

Query: 175 GTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------ 228
           GTAVEWVQMPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPTRVAEILKDRP      
Sbjct: 181 GTAVEWVQMPGMKPGPDSIGIVAISHGCAGVAARACGLVGLEPTRVAEILKDRPSWFRDC 240

Query: 229 ------------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI 270
                        G  I      LYA TTLAPARDFWLLRYTSVLEDGSLVVCERSLKN 
Sbjct: 241 RAVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNT 300

Query: 271 QNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTV 330
           QNGP+MPPVQ FVRAEMLPSGYL+RPCEGGGSII IVDH+DLEPWSVPEVLRPLYESST+
Sbjct: 301 QNGPSMPPVQPFVRAEMLPSGYLVRPCEGGGSIIRIVDHLDLEPWSVPEVLRPLYESSTM 360

Query: 331 LAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTV 390
           LAQKTTMAALRQLRQ+AQEV+Q +V+GWGRRPAALRALSQRLSRGFNEA+NGFTDEGW++
Sbjct: 361 LAQKTTMAALRQLRQIAQEVSQPNVSGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSI 420

Query: 391 MGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR 450
           MGNDG+DDVT+LVNSSPDKLMGLNLSF+NGFPAVSNAVLCA+ASMLLQNVPPA+LLRFLR
Sbjct: 421 MGNDGIDDVTILVNSSPDKLMGLNLSFSNGFPAVSNAVLCARASMLLQNVPPAVLLRFLR 480

Query: 451 EHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGV 510
           EHRSEWADN+ID YSAAA+KVG C+LPGSR+G+FG QVILPLAHTIEHEEF+EVIKLEG+
Sbjct: 481 EHRSEWADNSIDAYSAAAVKVGSCALPGSRIGSFGGQVILPLAHTIEHEEFLEVIKLEGM 540

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
           GHSPEDA+MPRD+F LQ+CSG+DENAVGT AELIFAPIDASFADDAPLLPSGFRIIPLDS
Sbjct: 541 GHSPEDALMPRDIFFLQMCSGVDENAVGTFAELIFAPIDASFADDAPLLPSGFRIIPLDS 600

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
            KE SSPNRTLDLAS+LEIGPAGNR+ N+ + NS C RSVMTIAFEFAFESHMQEHVA+M
Sbjct: 601 VKEASSPNRTLDLASSLEIGPAGNRSFNDINANSGCTRSVMTIAFEFAFESHMQEHVASM 660

Query: 631 ARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLK 690
           ARQYVRSIISSVQRVALALSPSN+ S AGLRTPLGTPEA TLARWICHSYRCYLGVDLLK
Sbjct: 661 ARQYVRSIISSVQRVALALSPSNLGSHAGLRTPLGTPEAQTLARWICHSYRCYLGVDLLK 720

Query: 691 SSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDD 750
           SS+EGSESILKNLWHH+DA+MCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDD
Sbjct: 721 SSNEGSESILKNLWHHSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDD 780

Query: 751 HGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFIN 810
           HGRK L +EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKV+NEEE AHCICFMFIN
Sbjct: 781 HGRKTLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVMNEEENAHCICFMFIN 840

Query: 811 WSFV 814
           WSFV
Sbjct: 841 WSFV 844


>gi|225442505|ref|XP_002284009.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 2
           [Vitis vinifera]
          Length = 832

 Score = 1538 bits (3983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 743/832 (89%), Positives = 777/832 (93%), Gaps = 30/832 (3%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 1   MDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 60

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ+TTLATKDTS
Sbjct: 61  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLATKDTS 120

Query: 133 CESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDS 192
           CESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDS
Sbjct: 121 CESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDS 180

Query: 193 VGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI- 233
           +GIVAISHGC+GVAARACGLVGLEPTRVAEILKDRP                   G  I 
Sbjct: 181 IGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANGGTIE 240

Query: 234 -----LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
                LYA TTLAPARDFWLLRYTSV+EDGSLVVCERSLKN QNGP+MPPVQHFVRAEML
Sbjct: 241 LLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQHFVRAEML 300

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQ 348
           PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ+AQ
Sbjct: 301 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQIAQ 360

Query: 349 EVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           EV+QS+V GWGRRPAALRALSQRLSRGFNEA+NGFTDEGW++MGNDG+DDVT+LVNSSP+
Sbjct: 361 EVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGIDDVTILVNSSPE 420

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAA 468
           KL GLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNID YSAAA
Sbjct: 421 KLTGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAYSAAA 480

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEE------FMEVIKLEGVGHSPEDAIMPRD 522
           +KVGPCSLPGSRVG+FGSQVILPLAHTIEHEE      F+EVIKLEGVGH PEDA+MPRD
Sbjct: 481 VKVGPCSLPGSRVGSFGSQVILPLAHTIEHEEASNLFIFLEVIKLEGVGHCPEDAMMPRD 540

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE SSPNRTLD
Sbjct: 541 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPNRTLD 600

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           LASALEIGPAGNR++N+YS N    RSVMTIAFEFAFESH+QE+VA+MARQYVRSIISSV
Sbjct: 601 LASALEIGPAGNRSSNDYSVNGGNTRSVMTIAFEFAFESHLQENVASMARQYVRSIISSV 660

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKN 702
           QRVALALSPS++SS AGLR PLGTPEA TLARWI HSYRCYLGV+LLKSS EGSE+ILK 
Sbjct: 661 QRVALALSPSHLSSHAGLRPPLGTPEAHTLARWISHSYRCYLGVELLKSSGEGSETILKT 720

Query: 703 LWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQ 762
           LWH +DA+MCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK L +EFPQ
Sbjct: 721 LWHLSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKTLCSEFPQ 780

Query: 763 IMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           IMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE AHC+CFMF+NWSFV
Sbjct: 781 IMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCVCFMFMNWSFV 832


>gi|206572105|gb|ACI13685.1| putative HB15 HD-ZipIII [Malus x domestica]
          Length = 838

 Score = 1536 bits (3977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 736/838 (87%), Positives = 778/838 (92%), Gaps = 24/838 (2%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MAMSCKDG   +LDNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MAMSCKDGNKHALDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKL+AMNKLLMEENDRLQKQVS LVYENGYFRQH
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYFRQH 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           TQ TTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETL EFLSKATGTAVEW
Sbjct: 121 TQGTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEW 180

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQMPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPTRVAEILKD P            
Sbjct: 181 VQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDLPSWLRDCRAVDVL 240

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I      LYA TTLAPA DFWLLRYTSVLEDGSLVVC RSLKN QNGPTM
Sbjct: 241 NVLPTANGGTIELLYMQLYAPTTLAPACDFWLLRYTSVLEDGSLVVCARSLKNTQNGPTM 300

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEP SVPEVLRPLYESS VLAQK T
Sbjct: 301 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPCSVPEVLRPLYESSAVLAQKMT 360

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           MAALRQLRQ+A EV+QS+V GWGRRPAALRALSQRLSRGFN+A+NGFTDEGW++MGNDGM
Sbjct: 361 MAALRQLRQIAHEVSQSNVTGWGRRPAALRALSQRLSRGFNDALNGFTDEGWSMMGNDGM 420

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           DDVT+L+NSSPDKLMGLNLSF NGFPAVSN+VLCAKASMLLQNVPPAILLRFLREHRSEW
Sbjct: 421 DDVTILINSSPDKLMGLNLSFGNGFPAVSNSVLCAKASMLLQNVPPAILLRFLREHRSEW 480

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
           ADNNID YSAAA+KVGPCSL GSRVG+FG QVILPLAHT+EHEEF+EVIKLEGVGHSPED
Sbjct: 481 ADNNIDAYSAAAVKVGPCSLAGSRVGSFGGQVILPLAHTLEHEEFLEVIKLEGVGHSPED 540

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSS 576
           A+MPR+MFLLQLCSGMDENAVG+CAELIFAPIDASFADDAPLLPSGFRIIPLD GKE SS
Sbjct: 541 AMMPREMFLLQLCSGMDENAVGSCAELIFAPIDASFADDAPLLPSGFRIIPLDYGKEASS 600

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
           PNRTLDLASALEIGP GN+ ++ YS ++ C+RSVMTIAFEFA E+HMQEHVA+MARQYVR
Sbjct: 601 PNRTLDLASALEIGPTGNKGSSEYSASAGCVRSVMTIAFEFACETHMQEHVASMARQYVR 660

Query: 637 SIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS 696
           SIISSVQRVALALSPSN+SSQAGLR+PLGTPEA TLARWIC+SYRCYLGV+LLKS +EGS
Sbjct: 661 SIISSVQRVALALSPSNLSSQAGLRSPLGTPEAQTLARWICNSYRCYLGVELLKSGNEGS 720

Query: 697 ESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKAL 756
           ESILK+LWHH+DA+MCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK L
Sbjct: 721 ESILKSLWHHSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKTL 780

Query: 757 FAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            +EFPQIMQQGF CLQGGICLSSMGRPVSYERAVAWKVLNEEETAHC+CF+F+NWSFV
Sbjct: 781 CSEFPQIMQQGFTCLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCMCFLFVNWSFV 838


>gi|449447807|ref|XP_004141659.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Cucumis
           sativus]
 gi|449480641|ref|XP_004155954.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Cucumis
           sativus]
          Length = 837

 Score = 1533 bits (3968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 736/838 (87%), Positives = 775/838 (92%), Gaps = 25/838 (2%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MAMSCKDG    +DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MAMSCKDGNKHGIDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           TQSTTL  KDTSCE VVTSGQH+LT QHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW
Sbjct: 121 TQSTTLGAKDTSCEPVVTSGQHNLTSQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQMPGMKPGPDS+GIVAISHGC GVAARACGLVGLEPTRVAEILKD+P            
Sbjct: 181 VQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDQPSWFRDCRAVDVL 240

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I      LYA TTLAPARDFWLLRYTSVLEDGSLV+CERSLKN QNGPTM
Sbjct: 241 NVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPTM 300

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK T
Sbjct: 301 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMT 360

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           MAALRQLRQ+A EV+QS+V GWGRRPAALR+L QRL+RGFNEA+NGF DEGW+VMGNDGM
Sbjct: 361 MAALRQLRQIAHEVSQSNVTGWGRRPAALRSLGQRLTRGFNEALNGFNDEGWSVMGNDGM 420

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           DDVT+LVNSSPDKLMGLN+SFANGF A+SNAVLCA+ASMLLQNVPPAILLRFLREHRSEW
Sbjct: 421 DDVTILVNSSPDKLMGLNISFANGFSAISNAVLCARASMLLQNVPPAILLRFLREHRSEW 480

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
           ADNNID YSAAA+KVGP SLPGSRVG+FG+QVILPLAHTIEHEEF+EVIKLEG+GH+PED
Sbjct: 481 ADNNIDAYSAAAVKVGPWSLPGSRVGSFGNQVILPLAHTIEHEEFLEVIKLEGIGHTPED 540

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSS 576
           A+MPR+MFLLQLCSGMDENA+GTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE SS
Sbjct: 541 AMMPREMFLLQLCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASS 600

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
           PNRTLDLASALEIGPAGNR  N+ S NS C RSVMTIAFEFAFESHMQEHVA+MARQYVR
Sbjct: 601 PNRTLDLASALEIGPAGNRTPND-SVNSGCTRSVMTIAFEFAFESHMQEHVASMARQYVR 659

Query: 637 SIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS 696
           SIISSVQRVALALSPS++SS  GLR+PLGTPEA TLARWIC+SYRCYLGV+LLKS +EG 
Sbjct: 660 SIISSVQRVALALSPSHLSSHTGLRSPLGTPEAQTLARWICNSYRCYLGVELLKSGNEGG 719

Query: 697 ESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKAL 756
           E +LK LWHH+DA+MCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHG+K L
Sbjct: 720 ELVLKTLWHHSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGKKTL 779

Query: 757 FAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            +EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE AHCICFMF+NWSFV
Sbjct: 780 CSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFMFVNWSFV 837


>gi|224059140|ref|XP_002299735.1| predicted protein [Populus trichocarpa]
 gi|60327629|gb|AAX19054.1| class III HD-Zip protein 5 [Populus trichocarpa]
 gi|222846993|gb|EEE84540.1| predicted protein [Populus trichocarpa]
          Length = 851

 Score = 1531 bits (3964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 743/852 (87%), Positives = 781/852 (91%), Gaps = 39/852 (4%)

Query: 1   MAMSCKDGKTG-SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           MAMSCKDGK   ++DNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEP
Sbjct: 1   MAMSCKDGKNPINMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEP 60

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 119
           KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ
Sbjct: 61  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 120

Query: 120 HTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 179
           HTQ+TTLA+KDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE
Sbjct: 121 HTQNTTLASKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 180

Query: 180 WVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP----------- 228
           WVQMPGMKPGPDS+GIVAISHGCSGV ARACGLVGLEPTRVAEILKDRP           
Sbjct: 181 WVQMPGMKPGPDSIGIVAISHGCSGVGARACGLVGLEPTRVAEILKDRPSWFRDCRAVDV 240

Query: 229 -------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPT 275
                   G  I      LYA TTLAP RDFWLLRYTSVLEDGSLVVCERSLKN QNGP+
Sbjct: 241 LNVLPTANGGTIELLYMQLYAPTTLAPGRDFWLLRYTSVLEDGSLVVCERSLKNTQNGPS 300

Query: 276 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 335
           MPPVQHFVRAEMLPSGYL+RPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT
Sbjct: 301 MPPVQHFVRAEMLPSGYLVRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 360

Query: 336 TMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDG 395
           TMAALRQLRQ+AQE +QSSV  WGRRPAALRALSQRLSRGFNEA+NGF+DEGW+++GNDG
Sbjct: 361 TMAALRQLRQIAQEASQSSVTNWGRRPAALRALSQRLSRGFNEALNGFSDEGWSMIGNDG 420

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQ-------------NVPP 442
           MDDVT+LVNSSPDKLMGLNLSF+NGFPAVS+AVLCAKASMLLQ             NVPP
Sbjct: 421 MDDVTILVNSSPDKLMGLNLSFSNGFPAVSSAVLCAKASMLLQAGIQNCFLSLQHLNVPP 480

Query: 443 AILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFM 502
           AILLRFLREHRSEWADNNID Y+AAA+KVGPCSL GSRVG FG QVILPLAHT+EHEEF+
Sbjct: 481 AILLRFLREHRSEWADNNIDAYAAAAVKVGPCSLQGSRVGNFGGQVILPLAHTVEHEEFL 540

Query: 503 EVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSG 562
           EVIKLEGV HSPEDAIMPRD+FLLQLC GMDENAVGTCAELIFAPIDA+FADDAPLLPSG
Sbjct: 541 EVIKLEGVCHSPEDAIMPRDVFLLQLCCGMDENAVGTCAELIFAPIDATFADDAPLLPSG 600

Query: 563 FRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESH 622
           FRIIPLDSGKE SSPNRTLDLASALE+G AGNRA++++S NS C RSVMTIAFEFAFESH
Sbjct: 601 FRIIPLDSGKEASSPNRTLDLASALEVG-AGNRASSDFSANSGCTRSVMTIAFEFAFESH 659

Query: 623 MQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRC 682
           MQEHVA+MARQY+RSIISSVQRVALALSPS+  SQAGLR+PLGTPEA TLARWIC SYR 
Sbjct: 660 MQEHVASMARQYIRSIISSVQRVALALSPSHQGSQAGLRSPLGTPEAQTLARWICQSYRN 719

Query: 683 YLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDI 742
           YLGV+LLKSSSEGSESILK LWHH+DA+MCCSLKALPVFTFANQAGLDMLETTLVALQDI
Sbjct: 720 YLGVELLKSSSEGSESILKTLWHHSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDI 779

Query: 743 TLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAH 802
           TLEKIFDDHGRK L +EFPQIMQQGF CLQGGICLSSMGRPVSYERAV+WKVLNEEE AH
Sbjct: 780 TLEKIFDDHGRKTLCSEFPQIMQQGFTCLQGGICLSSMGRPVSYERAVSWKVLNEEENAH 839

Query: 803 CICFMFINWSFV 814
           CICFMFINWSFV
Sbjct: 840 CICFMFINWSFV 851


>gi|224074019|ref|XP_002304217.1| predicted protein [Populus trichocarpa]
 gi|60327631|gb|AAX19055.1| class III HD-Zip protein 6 [Populus trichocarpa]
 gi|222841649|gb|EEE79196.1| predicted protein [Populus trichocarpa]
          Length = 837

 Score = 1521 bits (3937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 731/838 (87%), Positives = 771/838 (92%), Gaps = 25/838 (2%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           M MSCKDGK   +DNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MEMSCKDGKQPIMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKL+AMNKLLMEENDRLQKQVSQLVYENGYFRQH
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           T +T LATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW
Sbjct: 121 THNTPLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQMPGMKPGPDS GIVAISHGC+GV ARACGLVGLEPTRVAEILKDRP            
Sbjct: 181 VQMPGMKPGPDSSGIVAISHGCAGVGARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVL 240

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I      LYA TTLAP RDFWLLRYTSVLEDGSLVVCERSLKN QNGP+M
Sbjct: 241 NVLPTANGGTIELLYMQLYAPTTLAPGRDFWLLRYTSVLEDGSLVVCERSLKNTQNGPSM 300

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           PPVQHFVRAEMLPSGYL+RPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT
Sbjct: 301 PPVQHFVRAEMLPSGYLVRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 360

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           M ALRQLRQ+AQE +QS+V  WGRRPAALRALSQRLSRGFNEA+NGF+DEGW+++GNDGM
Sbjct: 361 MVALRQLRQIAQEASQSNVTNWGRRPAALRALSQRLSRGFNEALNGFSDEGWSMIGNDGM 420

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           DDVT+LVNSSPDKLMG NLSF NGFPAVS+AVLCAKASMLLQNVPPAILLRFLREHRSEW
Sbjct: 421 DDVTILVNSSPDKLMGSNLSFTNGFPAVSSAVLCAKASMLLQNVPPAILLRFLREHRSEW 480

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
           ADNNID Y+AAA+KVGP SL GSRVG+FG QVILPLAHTIEHEEF+EVIKLEGVGHSPED
Sbjct: 481 ADNNIDAYAAAAVKVGPFSLQGSRVGSFGGQVILPLAHTIEHEEFLEVIKLEGVGHSPED 540

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSS 576
            IMPRD+FLLQLC GMDENAVGTCAELIFAPIDA+FADDAPLLPSGFRIIPLDSGKE SS
Sbjct: 541 PIMPRDVFLLQLCCGMDENAVGTCAELIFAPIDATFADDAPLLPSGFRIIPLDSGKEASS 600

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
           PNRTLDLA+ALE+GPAGNRA++++S NS C RSVMTIAFEFAFESHMQEHVA+M RQY+R
Sbjct: 601 PNRTLDLAAALEVGPAGNRASSDHSANSGCTRSVMTIAFEFAFESHMQEHVASMTRQYIR 660

Query: 637 SIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS 696
           SIISSVQRVALALSP ++ SQAGLR+PLGTPEA TLARWIC SYR YLGV+LLKS+ EGS
Sbjct: 661 SIISSVQRVALALSP-HLGSQAGLRSPLGTPEAQTLARWICQSYRSYLGVELLKSNGEGS 719

Query: 697 ESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKAL 756
           ESILK LWHH+DA+MCCSLKALP+FTFANQAGLDMLETTLVALQDITLEKIFDDHGRK L
Sbjct: 720 ESILKTLWHHSDAIMCCSLKALPIFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKTL 779

Query: 757 FAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            +EF QIMQQGF CLQGGICLSSMGRPVSYERAVAWKVLNEEE AHCICFMFINWSFV
Sbjct: 780 CSEFSQIMQQGFTCLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFMFINWSFV 837


>gi|356526089|ref|XP_003531652.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 838

 Score = 1518 bits (3930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 725/838 (86%), Positives = 775/838 (92%), Gaps = 26/838 (3%)

Query: 3   MSCKDGKTGS--LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MSCKDG      +DNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MSCKDGSRNGIGMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKE+SRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH
Sbjct: 61  QIKVWFQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           TQ TT ATKDT+CESVVTSGQH+LT QHPPRDASPAGLLSIAEETL EFLSKATGTAVEW
Sbjct: 121 TQITTQATKDTNCESVVTSGQHNLTTQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEW 180

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQMPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPTRVAEILKDRP            
Sbjct: 181 VQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPLWFRDCRAVDVL 240

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I      LYA TTLAPARDFWLLRYTSVLEDGSLV+CERSLKN QNGP+M
Sbjct: 241 NVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSM 300

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT
Sbjct: 301 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 360

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           MAALR LRQ++ EV+QS+V GWGRRPAALRALSQRLSRGFNEA+NGFTDEGWT + NDG+
Sbjct: 361 MAALRHLRQISHEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTTISNDGV 420

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           DDVT+LVNSSPDKLMGLNLSFANGFP+VSNAVLCAKASMLLQNVPPAILLRFLREHRSEW
Sbjct: 421 DDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 480

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
           ADNN+D Y+AAAIKVGPCSL GS VG FG QVILPLAHTIEHEEF+EVIKLEG+ HSPED
Sbjct: 481 ADNNMDAYTAAAIKVGPCSLSGSCVGNFGGQVILPLAHTIEHEEFLEVIKLEGIAHSPED 540

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSS 576
            IMPR+MFLLQLCSGMDENAVGTCAELI APIDASFADDAPLLPSGFRIIPL+SGKE SS
Sbjct: 541 TIMPREMFLLQLCSGMDENAVGTCAELISAPIDASFADDAPLLPSGFRIIPLESGKEASS 600

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
           PNRTLDLAS+L++GP+GNRA+N  + NS+CMRSVMTIAFEFAFESHMQEHV +MARQYVR
Sbjct: 601 PNRTLDLASSLDVGPSGNRASNGSAGNSSCMRSVMTIAFEFAFESHMQEHVTSMARQYVR 660

Query: 637 SIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS 696
           SIISSVQRVALALSPS++SS AGLR+PLGTPEA TLA WIC+SYRCYLGV+LLKS++EG+
Sbjct: 661 SIISSVQRVALALSPSHLSSHAGLRSPLGTPEAQTLAHWICNSYRCYLGVELLKSNNEGN 720

Query: 697 ESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKAL 756
           ES+LK+LWHH+DA++CC+LKALPVFTF+NQAGLDMLETTLVALQDITLEKIFDDHGRK L
Sbjct: 721 ESLLKSLWHHSDAILCCTLKALPVFTFSNQAGLDMLETTLVALQDITLEKIFDDHGRKIL 780

Query: 757 FAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           F+EFPQI+QQGFACLQGGICLSSMGRPVSYER VAWKVLNEEE AHCICFMF+NWSFV
Sbjct: 781 FSEFPQIIQQGFACLQGGICLSSMGRPVSYERVVAWKVLNEEENAHCICFMFVNWSFV 838


>gi|356522958|ref|XP_003530109.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 838

 Score = 1513 bits (3916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 726/839 (86%), Positives = 776/839 (92%), Gaps = 28/839 (3%)

Query: 3   MSCKDGKTGS--LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MSCKDG      +DNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MSCKDGSRNGIGMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKE+SRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH
Sbjct: 61  QIKVWFQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120

Query: 121 TQSTTLATKDTSCESVVTSGQ-HHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 179
           TQ TT ATKDT+CESVVTSGQ H+L  QHPPRDASPAGLLSIAEETL EFLSKATGTAVE
Sbjct: 121 TQITTQATKDTNCESVVTSGQQHNLITQHPPRDASPAGLLSIAEETLAEFLSKATGTAVE 180

Query: 180 WVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP----------- 228
           WVQMPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPTRVAEILKD+P           
Sbjct: 181 WVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDQPLWFRDCRAVDV 240

Query: 229 -------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPT 275
                   G  I      LYA TTLAPARDFWLLRYTSVLEDGSLV+CERSLKN QNGP+
Sbjct: 241 LNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPS 300

Query: 276 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 335
           MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT
Sbjct: 301 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 360

Query: 336 TMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDG 395
           TMAALR LRQ++ EV+QS+V GWGRRPAALRALSQRLSRGFNEA+NGFTDEGWT +GNDG
Sbjct: 361 TMAALRHLRQISHEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTTIGNDG 420

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSE 455
           +DDVT+LVNSSPDKLMGLNLSFANGFP+VSNAVLCAKASMLLQNVPPAILLRFLREHRSE
Sbjct: 421 VDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSE 480

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           WADNN+D Y+AAAIKVGPCSL GSRVG +G QVILPLAHTIEHEEF+EVIKLEG+ HSPE
Sbjct: 481 WADNNMDAYTAAAIKVGPCSLSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGIAHSPE 540

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS 575
           D IMPR+MFLLQLCSGMDENAVGTCAELI APIDASFADDAPLLPSGFRIIPL+SGKE S
Sbjct: 541 DTIMPREMFLLQLCSGMDENAVGTCAELISAPIDASFADDAPLLPSGFRIIPLESGKEAS 600

Query: 576 SPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYV 635
           SPNRTLDLASAL++GP+GNRA+N    NS+CMRSVMTIAFEFAFESHMQEHVA+MARQYV
Sbjct: 601 SPNRTLDLASALDVGPSGNRASNG-CANSSCMRSVMTIAFEFAFESHMQEHVASMARQYV 659

Query: 636 RSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEG 695
           RSIISSVQRVALALSPS++SS AGLR+PLGTPEA TLA WIC+SYRCYLGV+LLKS++EG
Sbjct: 660 RSIISSVQRVALALSPSHLSSHAGLRSPLGTPEAQTLAHWICNSYRCYLGVELLKSNNEG 719

Query: 696 SESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKA 755
           +ES+LK+LWHH+DA++CC+LKALPVFTF+NQAGLDMLETTLVALQDITLEKIFDDHGRK 
Sbjct: 720 NESLLKSLWHHSDAILCCTLKALPVFTFSNQAGLDMLETTLVALQDITLEKIFDDHGRKI 779

Query: 756 LFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           LF+EFPQI+QQGFACLQGGICLSSMGRPVSYER VAWKVLNEEE AHCICFMF+NWSFV
Sbjct: 780 LFSEFPQIIQQGFACLQGGICLSSMGRPVSYERVVAWKVLNEEENAHCICFMFVNWSFV 838


>gi|357454819|ref|XP_003597690.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
 gi|109729907|tpg|DAA05767.1| TPA_inf: class III HD-Zip protein CNA1 [Medicago truncatula]
 gi|355486738|gb|AES67941.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
          Length = 836

 Score = 1499 bits (3882), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 716/837 (85%), Positives = 770/837 (91%), Gaps = 26/837 (3%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           MSCKDGK G +DNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILS+IEPKQI
Sbjct: 1   MSCKDGK-GVMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSHIEPKQI 59

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKEASRLQAVNRKL+AMNKLLMEENDRLQKQVS LVYENGYFRQHTQ
Sbjct: 60  KVWFQNRRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYFRQHTQ 119

Query: 123 STTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           +T LATKDTSC+S VTSGQ  LT QHPPRDASPAGLLSIAEETL EFLSKATGTAVEWVQ
Sbjct: 120 NTNLATKDTSCDSAVTSGQRSLTAQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQ 179

Query: 183 MPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------------- 228
           MPGMKPGP+S+GI+AISHGC GVAARACGLVGLEPTRVAEILKDRP              
Sbjct: 180 MPGMKPGPESIGIIAISHGCHGVAARACGLVGLEPTRVAEILKDRPSWYRDCRAVDILNV 239

Query: 229 ----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPP 278
                G  I      LYA TTLAPARD WLLRYTSVLEDGSLV+CERSLKN QNGP+MPP
Sbjct: 240 LPTANGGTIELLYMQLYAPTTLAPARDLWLLRYTSVLEDGSLVICERSLKNTQNGPSMPP 299

Query: 279 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA 338
           VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST+LAQKTTM 
Sbjct: 300 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTMLAQKTTMV 359

Query: 339 ALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD 398
           ALR LRQ++ EV+QS+V GWGRRPAALRAL QRLSRGFNEA+NGFTDEGW+++GNDG+DD
Sbjct: 360 ALRHLRQISHEVSQSNVTGWGRRPAALRALGQRLSRGFNEALNGFTDEGWSMIGNDGVDD 419

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 458
           VT+LVNSSPDKLMGLNLSFANGFP+VSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD
Sbjct: 420 VTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 479

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
           NN+D YSAAAIK GPCS  GSRVG +G QVILPLAHTIEHEEF+EVIKLEG+ HSPEDAI
Sbjct: 480 NNMDAYSAAAIKAGPCSFSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGIAHSPEDAI 539

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS-SP 577
           MPR++FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE + +P
Sbjct: 540 MPREVFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEVANNP 599

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
           NRTLDL SAL+IGPAGN+A+N+YS NS CMRSVMTIAFEFAFESHMQ+HVA+MARQYVRS
Sbjct: 600 NRTLDLTSALDIGPAGNKASNDYSGNSGCMRSVMTIAFEFAFESHMQDHVASMARQYVRS 659

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
           IISSVQRVALALSPSN++SQ GLRTPLGTPEA TLARWI +SYRC+LG +LLKS++EGSE
Sbjct: 660 IISSVQRVALALSPSNLNSQGGLRTPLGTPEAQTLARWISNSYRCFLGAELLKSNNEGSE 719

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
           S+LK+LWHHTDA++CC+LKALPVFTFANQAGLDMLETTLVALQDI LEKIFDDHGRK L 
Sbjct: 720 SLLKSLWHHTDAILCCTLKALPVFTFANQAGLDMLETTLVALQDIALEKIFDDHGRKILC 779

Query: 758 AEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +EFP I+QQGFACLQGG+CLSSMGRP+SYER VAWKVLNEEE AHCICFMF+NWSFV
Sbjct: 780 SEFPLIIQQGFACLQGGLCLSSMGRPISYERVVAWKVLNEEENAHCICFMFVNWSFV 836


>gi|356522964|ref|XP_003530112.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 841

 Score = 1487 bits (3849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 715/841 (85%), Positives = 767/841 (91%), Gaps = 29/841 (3%)

Query: 3   MSCKDGKTGS--LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MSCKDG      +DNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MSCKDGSRNGIGMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKE+SRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH
Sbjct: 61  QIKVWFQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120

Query: 121 TQSTTLA--TKDTSCESVVTSGQ-HHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTA 177
           T   T    TKDTSCES VTSGQ H+LT QHPPRDASPAGLLSIAEETL EFLSKATGTA
Sbjct: 121 TTQNTKQQPTKDTSCESAVTSGQQHNLTTQHPPRDASPAGLLSIAEETLAEFLSKATGTA 180

Query: 178 VEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP--------- 228
           VEWVQMPGMKPGPDS+GIVAISH C+GVAARACGLVGLEPTRVAEILKDRP         
Sbjct: 181 VEWVQMPGMKPGPDSIGIVAISHSCTGVAARACGLVGLEPTRVAEILKDRPLWFQDCRAV 240

Query: 229 ---------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNG 273
                     G  I      LYA TTLAPARDFWLLRYTSVLEDGSLV+CERSLKN QNG
Sbjct: 241 DVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNG 300

Query: 274 PTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQ 333
           P+MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHM+LEPWSVPEVLRPLYESSTVLAQ
Sbjct: 301 PSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEPWSVPEVLRPLYESSTVLAQ 360

Query: 334 KTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGN 393
           KT++ ALR LRQ++ EV+QS+V GWGRRPAALRALSQRLSRGFNEA+NGFTDEGWT +GN
Sbjct: 361 KTSIVALRHLRQISHEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTTIGN 420

Query: 394 DGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHR 453
           DG+DDVT+LVNSSPDKLMGLNLSFANGFP+VSNAVLCAKASMLLQNVPPAILLRFLREHR
Sbjct: 421 DGVDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHR 480

Query: 454 SEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHS 513
           SEWADNN+D Y+AAAIKVGPCSL GSRVG +G QVILPLAHTIEHEEF+EVIKLEG+ HS
Sbjct: 481 SEWADNNMDAYTAAAIKVGPCSLSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGIAHS 540

Query: 514 PEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE 573
           PED IMPR+MFLLQLCSGMDENAVGTCAELI APIDASFADDAPLLPSGFRIIPL+SGKE
Sbjct: 541 PEDTIMPREMFLLQLCSGMDENAVGTCAELISAPIDASFADDAPLLPSGFRIIPLESGKE 600

Query: 574 TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQ 633
            SSPNRTLDLASAL+IG +GNRA+N  + NS+ MRSVMTIAFEFAFESHMQEHVA+MARQ
Sbjct: 601 ASSPNRTLDLASALDIGSSGNRASNECAGNSSYMRSVMTIAFEFAFESHMQEHVASMARQ 660

Query: 634 YVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           YVRSIISSVQRVALALSPS++SS AGLR+PLGTPEA TLA WIC+SYRCYLGV+LLKS++
Sbjct: 661 YVRSIISSVQRVALALSPSHLSSHAGLRSPLGTPEAQTLAHWICNSYRCYLGVELLKSNN 720

Query: 694 EGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGR 753
           EG+ES+LK+LWHH+DA++CC+LKALPVFTF+NQAGLDMLETTLVALQD  LEKIFDDHGR
Sbjct: 721 EGNESLLKSLWHHSDAILCCTLKALPVFTFSNQAGLDMLETTLVALQDTPLEKIFDDHGR 780

Query: 754 KALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
           K LF+EFPQI+QQGF CLQGGICLSSMGRPVSYER VAWKVLNEEE AHC+CFMF+NWSF
Sbjct: 781 KILFSEFPQIIQQGFVCLQGGICLSSMGRPVSYERVVAWKVLNEEENAHCMCFMFMNWSF 840

Query: 814 V 814
           V
Sbjct: 841 V 841


>gi|357513433|ref|XP_003627005.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
 gi|355521027|gb|AET01481.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
          Length = 832

 Score = 1475 bits (3819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 704/836 (84%), Positives = 769/836 (91%), Gaps = 28/836 (3%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M+CKDG    +DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP+QI
Sbjct: 1   MACKDGNKHLMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPRQI 60

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKE+ RLQ VNRKLTAMNKLLMEENDRLQKQVS LVYENGYFRQ+TQ
Sbjct: 61  KVWFQNRRCREKQRKESFRLQGVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRQNTQ 120

Query: 123 STTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           +   ATKDTSC+SVVTSGQH++T QHPPRDASPAGLLSIAEETL EFLSKATGTAVEWVQ
Sbjct: 121 N---ATKDTSCDSVVTSGQHNMTSQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQ 177

Query: 183 MPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------------- 228
           MPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPTRVAEILKDRP              
Sbjct: 178 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPLWFRDCRAVDIVNV 237

Query: 229 ----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPP 278
                G  I      LYA TTLAPARDFWLLRYTSV+EDGSLV+CERSLKN QNGP+MPP
Sbjct: 238 LPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVVEDGSLVICERSLKNTQNGPSMPP 297

Query: 279 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA 338
           V HFVRA+MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYES  VLAQKTTMA
Sbjct: 298 VPHFVRADMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESPMVLAQKTTMA 357

Query: 339 ALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD 398
           ALR LRQ++ EV+Q +V GWGRRPAALRALSQRLSRGFNEA+NGFTDEGWT+MGNDG+DD
Sbjct: 358 ALRHLRQISHEVSQPNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTMMGNDGVDD 417

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 458
           VT+LVNSSPDKLMGLNLSF NGFP+VSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD
Sbjct: 418 VTILVNSSPDKLMGLNLSFGNGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 477

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
           +N+D Y+AAAIKVGPCSL GSRVG +G QVILPLAHTIEHEEF+EVIKL+GV HSPE+ +
Sbjct: 478 HNMDAYTAAAIKVGPCSLTGSRVGNYGGQVILPLAHTIEHEEFLEVIKLDGVAHSPEE-M 536

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPN 578
           M R++FLLQLCSGMDENA+GTCAELIFAPIDASFADDAPLLPSGFRIIPL+SGKE+SSPN
Sbjct: 537 MARELFLLQLCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLESGKESSSPN 596

Query: 579 RTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSI 638
           RTLDLASAL+IGP GNRA+++ + NS C+RSVMTIAFEFA+ESHMQE+VA MARQYVRSI
Sbjct: 597 RTLDLASALDIGPTGNRASSDNAGNSGCVRSVMTIAFEFAYESHMQENVACMARQYVRSI 656

Query: 639 ISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSES 698
           ISSVQRVALALSPSN+SS AGLR+PLGTPEA TLA WIC+SYRCYLGV+LLKS++EG ES
Sbjct: 657 ISSVQRVALALSPSNLSSHAGLRSPLGTPEAQTLAHWICNSYRCYLGVELLKSNTEGKES 716

Query: 699 ILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFA 758
           +LK+LWHH+DAV+CC+LKA+PVFTF+NQAGLDMLETTLVALQDI+LEKIFDD+GRK LF+
Sbjct: 717 VLKSLWHHSDAVLCCTLKAMPVFTFSNQAGLDMLETTLVALQDISLEKIFDDNGRKTLFS 776

Query: 759 EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           EFPQI+QQGFACLQGGICLSSMGRPVSYERAVAWKVLN+E+ AHCICFMF+NWSFV
Sbjct: 777 EFPQIIQQGFACLQGGICLSSMGRPVSYERAVAWKVLNDEQNAHCICFMFVNWSFV 832


>gi|15218158|ref|NP_175627.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|75216693|sp|Q9ZU11.1|ATB15_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-15; AltName:
           Full=HD-ZIP protein ATHB-15; AltName: Full=Homeodomain
           transcription factor ATHB-15; AltName: Full=Protein
           CORONA; AltName: Full=Protein INCURVATA 4
 gi|4220462|gb|AAD12689.1| Strong similarity to gb|Z50851 HD-zip (athb-8) gene from
           Arabidopsis thaliana containing Homeobox PF|00046 and
           bZIP PF|00170 domains [Arabidopsis thaliana]
 gi|16974581|gb|AAL31186.1| At1g52150/F5F19_21 [Arabidopsis thaliana]
 gi|19578319|emb|CAD28400.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|332194639|gb|AEE32760.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 836

 Score = 1469 bits (3802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 717/840 (85%), Positives = 759/840 (90%), Gaps = 30/840 (3%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MAMSCKDGK G LDNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MAMSCKDGKLGCLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV+EN YFRQH
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQH 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           T + +L  KDTSCESVVTSGQH L  Q+P RDASPAGLLSIAEETL EFLSKATGTAVEW
Sbjct: 121 TPNPSLPAKDTSCESVVTSGQHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEW 180

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQMPGMKPGPDS+GI+AISHGC+GVAARACGLVGLEPTRVAEI+KDRP            
Sbjct: 181 VQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVM 240

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  +      LYA TTLAP RDFWLLRYTSVLEDGSLVVCERSLK+ QNGP+M
Sbjct: 241 NVLPTANGGTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSM 300

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           P VQ+FVRAEML SGYLIRPC+GGGSIIHIVDHMDLE  SVPEVLRPLYES  VLAQKTT
Sbjct: 301 PLVQNFVRAEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTT 360

Query: 337 MAALRQLRQMAQEVTQ--SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
           MAALRQL+Q+AQEVTQ  SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW+V+G D
Sbjct: 361 MAALRQLKQIAQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-D 419

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
            MDDVT+ VNSSPDKLMGLNL+FANGF  VSN VLCAKASMLLQNVPPAILLRFLREHRS
Sbjct: 420 SMDDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRS 479

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EWADNNID Y AAA+KVGPCS   +RVG FG QVILPLAHTIEHEEFMEVIKLEG+GHSP
Sbjct: 480 EWADNNIDAYLAAAVKVGPCS---ARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSP 536

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET 574
           EDAI+PRD+FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS KE 
Sbjct: 537 EDAIVPRDIFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEV 596

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
           SSPNRTLDLASALEIG AG +A+ + S NSTC RSVMTIAFEF  ESHMQEHVA+MARQY
Sbjct: 597 SSPNRTLDLASALEIGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQY 656

Query: 635 VRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
           VR IISSVQRVALALSPS+ISSQ GLRTPLGTPEA TLARWIC SYR Y+GV+LLKS+S+
Sbjct: 657 VRGIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSD 716

Query: 695 GSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 754
           G+ESILKNLWHHTDA++CCS+KALPVFTFANQAGLDMLETTLVALQDI+LEKIFDD+GRK
Sbjct: 717 GNESILKNLWHHTDAIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRK 776

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            L +EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE AHCICF+FINWSFV
Sbjct: 777 TLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV 836


>gi|59709573|gb|AAW88440.1| CORONA [Arabidopsis thaliana]
          Length = 836

 Score = 1468 bits (3801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 716/840 (85%), Positives = 759/840 (90%), Gaps = 30/840 (3%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MAMSCKDGK G LDNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MAMSCKDGKLGCLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV+EN YFRQH
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQH 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           T + +L  KDTSCESVVTSGQH L  Q+P RDASPAGLLSIAEETL EFLSKATGTAVEW
Sbjct: 121 TPNPSLPAKDTSCESVVTSGQHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEW 180

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           +QMPGMKPGPDS+GI+AISHGC+GVAARACGLVGLEPTRVAEI+KDRP            
Sbjct: 181 IQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVDVM 240

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  +      LYA TTLAP RDFWLLRYTSVLEDGSLVVCERSLK+ QNGP+M
Sbjct: 241 NVLPTANGGTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSM 300

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           P VQ+FVRAEML SGYLIRPC+GGGSIIHIVDHMDLE  SVPEVLRPLYES  VLAQKTT
Sbjct: 301 PLVQNFVRAEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTT 360

Query: 337 MAALRQLRQMAQEVTQ--SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
           MAALRQL+Q+AQEVTQ  SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW+V+G D
Sbjct: 361 MAALRQLKQIAQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-D 419

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
            MDDVT+ VNSSPDKLMGLNL+FANGF  VSN VLCAKASMLLQNVPPAILLRFLREHRS
Sbjct: 420 SMDDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRS 479

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EWADNNID Y AAA+KVGPCS   +RVG FG QVILPLAHTIEHEEFMEVIKLEG+GHSP
Sbjct: 480 EWADNNIDAYLAAAVKVGPCS---ARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSP 536

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET 574
           EDAI+PRD+FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS KE 
Sbjct: 537 EDAIVPRDIFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEV 596

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
           SSPNRTLDLASALEIG AG +A+ + S NSTC RSVMTIAFEF  ESHMQEHVA+MARQY
Sbjct: 597 SSPNRTLDLASALEIGSAGTKASTDLSGNSTCTRSVMTIAFEFGIESHMQEHVASMARQY 656

Query: 635 VRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
           VR IISSVQRVALALSPS+ISSQ GLRTPLGTPEA TLARWIC SYR Y+GV+LLKS+S+
Sbjct: 657 VRGIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSD 716

Query: 695 GSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 754
           G+ESILKNLWHHTDA++CCS+KALPVFTFANQAGLDMLETTLVALQDI+LEKIFDD+GRK
Sbjct: 717 GNESILKNLWHHTDAIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRK 776

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            L +EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE AHCICF+FINWSFV
Sbjct: 777 TLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV 836


>gi|297852954|ref|XP_002894358.1| ATHB-15 [Arabidopsis lyrata subsp. lyrata]
 gi|297340200|gb|EFH70617.1| ATHB-15 [Arabidopsis lyrata subsp. lyrata]
          Length = 837

 Score = 1467 bits (3799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 719/841 (85%), Positives = 760/841 (90%), Gaps = 31/841 (3%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MAMSCKDGK G LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MAMSCKDGKLGCLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV+EN YFRQH
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQH 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           T + +L  KDTSCESVVTSGQH L  Q+P RDASPAGLLSIAEETL EFLSKATGTAVEW
Sbjct: 121 TPNPSLPAKDTSCESVVTSGQHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEW 180

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQMPGMKPGPDS+GI+AISHGC+GVAARACGLVGLEPTRVAEI+KDRP            
Sbjct: 181 VQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVDVM 240

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I      LYA TTLAP RDFWLLRYTSVLEDGSLVVCERSLK+ QNGP+M
Sbjct: 241 NVLPTANGGTIELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSM 300

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           P VQ+FVRAEMLPSGYLIRPC+GGGSIIHIVDHMDLE  SVPEVLRPLYES  VLAQKTT
Sbjct: 301 PLVQNFVRAEMLPSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTT 360

Query: 337 MAALRQLRQMAQEVTQ--SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
           MAALRQL+Q+AQEVTQ  SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW+V+G D
Sbjct: 361 MAALRQLKQIAQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-D 419

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
            MDDVT+ VNSSPDKLMG+NL+F+NGF  VSN VLCAKASMLLQNVPPAILLRFLREHRS
Sbjct: 420 SMDDVTITVNSSPDKLMGINLTFSNGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRS 479

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EWADNNID Y AAA+KVGPCS   +RVG FG QVILPLAHTIEHEEFMEVIKLEG+GHSP
Sbjct: 480 EWADNNIDAYLAAAVKVGPCS---ARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSP 536

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGK-E 573
           EDAI+PRD+FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS K E
Sbjct: 537 EDAIVPRDIFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKQE 596

Query: 574 TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQ 633
            SSPNRTLDLASALEIG AG +A+ + S NSTC RSVMTIAFEF  ESHMQEHVA+MARQ
Sbjct: 597 VSSPNRTLDLASALEIGSAGTKASADQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQ 656

Query: 634 YVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           YVR IISSVQRVALALSPS+ISSQ GLRTPLGTPEA TLARWIC SYR Y+GV+LLKS+S
Sbjct: 657 YVRGIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNS 716

Query: 694 EGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGR 753
           EG+ESILKNLWHHTDA++CCS+KALPVFTFANQAGLDMLETTLVALQDI+LEKIFDD+GR
Sbjct: 717 EGNESILKNLWHHTDAIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGR 776

Query: 754 KALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
           K L +EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE AHCICF+FINWSF
Sbjct: 777 KTLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSF 836

Query: 814 V 814
           V
Sbjct: 837 V 837


>gi|30695149|ref|NP_849795.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|332194640|gb|AEE32761.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 837

 Score = 1464 bits (3790), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 717/841 (85%), Positives = 759/841 (90%), Gaps = 31/841 (3%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MAMSCKDGK G LDNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MAMSCKDGKLGCLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV+EN YFRQH
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQH 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           T + +L  KDTSCESVVTSGQH L  Q+P RDASPAGLLSIAEETL EFLSKATGTAVEW
Sbjct: 121 TPNPSLPAKDTSCESVVTSGQHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEW 180

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQMPGMKPGPDS+GI+AISHGC+GVAARACGLVGLEPTRVAEI+KDRP            
Sbjct: 181 VQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVM 240

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  +      LYA TTLAP RDFWLLRYTSVLEDGSLVVCERSLK+ QNGP+M
Sbjct: 241 NVLPTANGGTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSM 300

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           P VQ+FVRAEML SGYLIRPC+GGGSIIHIVDHMDLE  SVPEVLRPLYES  VLAQKTT
Sbjct: 301 PLVQNFVRAEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTT 360

Query: 337 MAALRQLRQMAQEVTQ--SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
           MAALRQL+Q+AQEVTQ  SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW+V+G D
Sbjct: 361 MAALRQLKQIAQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-D 419

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
            MDDVT+ VNSSPDKLMGLNL+FANGF  VSN VLCAKASMLLQNVPPAILLRFLREHRS
Sbjct: 420 SMDDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRS 479

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EWADNNID Y AAA+KVGPCS   +RVG FG QVILPLAHTIEHEEFMEVIKLEG+GHSP
Sbjct: 480 EWADNNIDAYLAAAVKVGPCS---ARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSP 536

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGK-E 573
           EDAI+PRD+FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS K E
Sbjct: 537 EDAIVPRDIFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKQE 596

Query: 574 TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQ 633
            SSPNRTLDLASALEIG AG +A+ + S NSTC RSVMTIAFEF  ESHMQEHVA+MARQ
Sbjct: 597 VSSPNRTLDLASALEIGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQ 656

Query: 634 YVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           YVR IISSVQRVALALSPS+ISSQ GLRTPLGTPEA TLARWIC SYR Y+GV+LLKS+S
Sbjct: 657 YVRGIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNS 716

Query: 694 EGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGR 753
           +G+ESILKNLWHHTDA++CCS+KALPVFTFANQAGLDMLETTLVALQDI+LEKIFDD+GR
Sbjct: 717 DGNESILKNLWHHTDAIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGR 776

Query: 754 KALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
           K L +EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE AHCICF+FINWSF
Sbjct: 777 KTLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSF 836

Query: 814 V 814
           V
Sbjct: 837 V 837


>gi|356526091|ref|XP_003531653.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 843

 Score = 1459 bits (3776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 704/843 (83%), Positives = 760/843 (90%), Gaps = 31/843 (3%)

Query: 3   MSCKDGKTGS----LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIE 58
           MSCKDG        +DNGKYVRYTPEQVEALERLYH+CPKPSSIRR QLIRECP LS+I+
Sbjct: 1   MSCKDGSRNGIGIGMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRLQLIRECPTLSHID 60

Query: 59  PKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFR 118
           PKQIKVWFQNRRCREKQRKE+SRLQAVNRKLTAMNKLLMEE DRLQKQVSQLVYENGYFR
Sbjct: 61  PKQIKVWFQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEEIDRLQKQVSQLVYENGYFR 120

Query: 119 QHTQSTT--LATKDTSCESVVTSGQ-HHLTPQHPPRDASPAGLLSIAEETLTEFLSKATG 175
           QHT   T   A KDTSCES V SGQ H+L  QHPPRDASPAGLLSIAEETL EFLSKATG
Sbjct: 121 QHTTQNTKQQAIKDTSCESAVRSGQQHNLITQHPPRDASPAGLLSIAEETLEEFLSKATG 180

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------- 228
           TAVEWVQMPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPTRVAEILKDRP       
Sbjct: 181 TAVEWVQMPGMKPGPDSIGIVAISHGCNGVAARACGLVGLEPTRVAEILKDRPLWFRDCR 240

Query: 229 -----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  I      LYA TTLAPARDFWLLRYTSVLED SLV+CERSLKN Q
Sbjct: 241 AVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDSSLVICERSLKNTQ 300

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
           NGP+MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHM+LEPWSVPEVLRPLYESS VL
Sbjct: 301 NGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEPWSVPEVLRPLYESSKVL 360

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           +QKTTMAALR LRQ++ EV+ S+V+GWGRRP+ALRALSQRLSRGFNEA+NGFTDEGWT +
Sbjct: 361 SQKTTMAALRHLRQISHEVSPSNVSGWGRRPSALRALSQRLSRGFNEALNGFTDEGWTTI 420

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           GNDG+DDVT+LVNSSPDKLMGLNLSFANGFP+VSNAVLCAKASMLLQNV PAILLRFLRE
Sbjct: 421 GNDGVDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVHPAILLRFLRE 480

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVG 511
           HRSEWADNN+D Y+AAAIKVGPCS  GSRVG +G QVILPLAHTIEHEEF+EVIKLEGV 
Sbjct: 481 HRSEWADNNMDAYTAAAIKVGPCSFSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGVA 540

Query: 512 HSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSG 571
           HSP+D IMPR+MFLLQLCSGMDENAVGTCAELI APIDASFADDAPLLPSGFRIIPL+SG
Sbjct: 541 HSPDDTIMPREMFLLQLCSGMDENAVGTCAELISAPIDASFADDAPLLPSGFRIIPLESG 600

Query: 572 KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMA 631
           KE SSPNRTLDLAS+L++GP+GNRA++  + NS+ MRSVMTIAFEFAFESHMQEHVA MA
Sbjct: 601 KEASSPNRTLDLASSLDVGPSGNRASDECAGNSSYMRSVMTIAFEFAFESHMQEHVAAMA 660

Query: 632 RQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKS 691
           RQYVRSIISSVQRV LALSPS++SS AGLR+PLGTPEA TLA WIC+SYRCYLGV+LLKS
Sbjct: 661 RQYVRSIISSVQRVGLALSPSHLSSHAGLRSPLGTPEAQTLAHWICNSYRCYLGVELLKS 720

Query: 692 SSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDH 751
           ++EG+ES+LK+LWHH+DA++CC+LKALPVFTF+NQAGLDMLETTLVALQDI LEKIFDDH
Sbjct: 721 NNEGNESLLKSLWHHSDAILCCTLKALPVFTFSNQAGLDMLETTLVALQDIPLEKIFDDH 780

Query: 752 GRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINW 811
            RK LF+EFPQI+QQGFACLQGGICLSSMGRPVSYER VAWKVLNEEE AHCICFMF+NW
Sbjct: 781 ERKILFSEFPQIIQQGFACLQGGICLSSMGRPVSYERVVAWKVLNEEENAHCICFMFMNW 840

Query: 812 SFV 814
           SFV
Sbjct: 841 SFV 843


>gi|359476025|ref|XP_002283717.2| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Vitis
           vinifera]
 gi|296081833|emb|CBI20838.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score = 1431 bits (3703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 688/835 (82%), Positives = 749/835 (89%), Gaps = 25/835 (2%)

Query: 4   SCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           SCKD K  +LDNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIK
Sbjct: 6   SCKDAKM-ALDNGKYVRYTPEQVEALERLYHDCPKPSSLRRQQLIRECPILSNIEPKQIK 64

Query: 64  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQS 123
           VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQ+
Sbjct: 65  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTQN 124

Query: 124 TTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 183
            TLAT DTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM
Sbjct: 125 ATLATTDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 184

Query: 184 PGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP--------------- 228
           PGMKPGPDS+GIVAISHGC+GVAARACGLV LEPTRVAEILKD P               
Sbjct: 185 PGMKPGPDSIGIVAISHGCTGVAARACGLVSLEPTRVAEILKDWPSWYRECRNVDVLNVL 244

Query: 229 ---RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPV 279
               G  I      LYA TTLAPARDFWLLRYTSVLEDGSLVVCERSL N QNGP+MPPV
Sbjct: 245 STGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPV 304

Query: 280 QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAA 339
           Q+FVRAE LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST+LAQKTTMAA
Sbjct: 305 QYFVRAEKLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAA 364

Query: 340 LRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
           LRQLRQ++QEV+Q +  GWGRRPAALRAL QRL++GFNEAVNGFTDEGW++M +DG+DDV
Sbjct: 365 LRQLRQISQEVSQPTNTGWGRRPAALRALGQRLTKGFNEAVNGFTDEGWSMMESDGIDDV 424

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADN 459
           T+LVNSSP K+MG+NLS+A+GFP++SNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD+
Sbjct: 425 TLLVNSSPAKMMGVNLSYASGFPSMSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADS 484

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
           +ID YSAAA+K GPC+LP SR G +G QVILPLAHTIEHEEFMEVIKLE V H  ED +M
Sbjct: 485 SIDAYSAAAVKAGPCTLPVSRAGGYGGQVILPLAHTIEHEEFMEVIKLENVDHYREDLMM 544

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNR 579
             D+FLLQLCSG+D+NAVGTC+ELIFAPIDASF+DDAPLLPSGFRIIPLDSG + SSPNR
Sbjct: 545 SGDVFLLQLCSGVDDNAVGTCSELIFAPIDASFSDDAPLLPSGFRIIPLDSGVDGSSPNR 604

Query: 580 TLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSII 639
           TLDLAS+LE+GPAGN+A+++ S ++   +SVMTI+F+FAFE H+QE+VA+MARQYVRSII
Sbjct: 605 TLDLASSLEVGPAGNKASSDNSGHTGSAKSVMTISFQFAFEMHLQENVASMARQYVRSII 664

Query: 640 SSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESI 699
           SSVQRVALALSPS    Q G R   GTPEA TLARWIC SYRCYLGV+LLK S+EG+ESI
Sbjct: 665 SSVQRVALALSPSRFGPQMGFRPLPGTPEAHTLARWICQSYRCYLGVELLKPSNEGNESI 724

Query: 700 LKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAE 759
           LK LWHH+DAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEK FDD+GRK L +E
Sbjct: 725 LKTLWHHSDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKTFDDNGRKTLCSE 784

Query: 760 FPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           FPQIMQQGF CLQGG+CLSSMGRPVSYERAVAWKVL EE+ AHCICFMFINWSFV
Sbjct: 785 FPQIMQQGFVCLQGGVCLSSMGRPVSYERAVAWKVLTEEDNAHCICFMFINWSFV 839


>gi|224092274|ref|XP_002309538.1| predicted protein [Populus trichocarpa]
 gi|60327635|gb|AAX19057.1| class III HD-Zip protein 8 [Populus trichocarpa]
 gi|222855514|gb|EEE93061.1| predicted protein [Populus trichocarpa]
          Length = 828

 Score = 1420 bits (3675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 693/831 (83%), Positives = 748/831 (90%), Gaps = 32/831 (3%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +DNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILS+IEPKQIKVWFQNRRCR
Sbjct: 1   MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSHIEPKQIKVWFQNRRCR 60

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ-STTLATKDT 131
           EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN YFRQ TQ +T LAT DT
Sbjct: 61  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYFRQQTQNATNLATTDT 120

Query: 132 SCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           SCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETL +FLSKATGTAVEWVQMPGMKPGPD
Sbjct: 121 SCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAQFLSKATGTAVEWVQMPGMKPGPD 180

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPR------------------GSAI 233
           S+GIVAISHGC+GVAARACGLVGLEPTRVAEILKDRP                   G  I
Sbjct: 181 SIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVVNALSTGSGGTI 240

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 LYA TTLAPARDFWLLRYTSVLEDGSLVVCERSL N QNGP+MPP QHFVRAEM
Sbjct: 241 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPTQHFVRAEM 300

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPCEGGGSIIH+VDHMDLEPWSVPEVLRPLYESST+LAQKTTMAALR LRQ++
Sbjct: 301 LPSGYLIRPCEGGGSIIHVVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALRHLRQVS 360

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QEV+Q +V GWGRRPAALRALSQRLS+GFNEAVNGF DEGW+++ +DG+DDVTVLVNSSP
Sbjct: 361 QEVSQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFADEGWSMLESDGIDDVTVLVNSSP 420

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
            K+MG+N S+ANGFP++SNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD+ ID Y+AA
Sbjct: 421 AKMMGVNFSYANGFPSMSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADSGIDAYAAA 480

Query: 468 AIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEE----FMEVIKLEGVGHSPEDAIMPRDM 523
           A+K GPCSLP SR G FG QVILPLAHTIEHEE    FMEVIKLE +G+  ED +MP D+
Sbjct: 481 AVKAGPCSLPMSRAGNFGGQVILPLAHTIEHEEASTSFMEVIKLENMGYR-EDMLMPGDV 539

Query: 524 FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDL 583
           FLLQLCSG+DENAVGTCAELIFAPIDASF+DDAP++PSGFRIIPLDSG + SSPNRTLDL
Sbjct: 540 FLLQLCSGVDENAVGTCAELIFAPIDASFSDDAPIIPSGFRIIPLDSGMDASSPNRTLDL 599

Query: 584 ASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQ 643
           ASALE+GPAGNRA+ + S  S C +SVMTIAF+FAFE H+QE+VA+MARQYVRSII+SVQ
Sbjct: 600 ASALEVGPAGNRASGDLSGRSGCTKSVMTIAFQFAFEMHLQENVASMARQYVRSIIASVQ 659

Query: 644 RVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNL 703
           RVALALSPS+  S AG R P GTPEA TLARWIC SYRCYLGV+LLK  +EGSESILK L
Sbjct: 660 RVALALSPSHFGSHAGFRPPPGTPEAHTLARWICESYRCYLGVELLK--NEGSESILKTL 717

Query: 704 WHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQI 763
           WHH+DA+MCCSLK LPVFTFANQAGLDMLETTLVALQDITLEKIFDD+GRK L++EFPQI
Sbjct: 718 WHHSDALMCCSLKTLPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGRKTLYSEFPQI 777

Query: 764 MQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           MQQGF CLQGGICLSSMGRPVSYERAVAWKVLNEEE+AHCICFMFINWSFV
Sbjct: 778 MQQGFMCLQGGICLSSMGRPVSYERAVAWKVLNEEESAHCICFMFINWSFV 828


>gi|383930759|gb|AFH56718.1| class III HD-Zip protein 8 [Prunus persica]
          Length = 840

 Score = 1420 bits (3675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 689/837 (82%), Positives = 745/837 (89%), Gaps = 29/837 (3%)

Query: 4   SCKDGKTG-SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           +CKDG     +DNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQI
Sbjct: 7   ACKDGGMKMQMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQI 66

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN YFRQ TQ
Sbjct: 67  KVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYFRQQTQ 126

Query: 123 STTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           +T LAT DTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETL EFLSKATGTAVEWVQ
Sbjct: 127 NTNLATTDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQ 186

Query: 183 MPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------------- 228
           MPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPTRVAEILKDRP              
Sbjct: 187 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRNCRSVDVLNV 246

Query: 229 ----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPP 278
                G  I      LYA TTLAPARDFWLLRYTSVLEDGSLVVCERSL N QNGP+MPP
Sbjct: 247 LSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPP 306

Query: 279 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA 338
           VQ+FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST+LAQKTTMA
Sbjct: 307 VQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMA 366

Query: 339 ALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD 398
           ALR LRQ++QEV+Q +  GWGRRPAALRALSQRLS+GFNEAVNGFTDEGW+++ +DG+DD
Sbjct: 367 ALRNLRQISQEVSQPNAAGWGRRPAALRALSQRLSKGFNEAVNGFTDEGWSILESDGVDD 426

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 458
           VT+LVNSSP K+MG NL +ANG P++SNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD
Sbjct: 427 VTLLVNSSPGKMMGANL-YANGVPSMSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 485

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
            +ID YSAAAIK GPC L GSR G FG QVI PLAHTIEHEEFMEVIK+E +GH  ED I
Sbjct: 486 RSIDAYSAAAIKPGPCGLLGSRAGGFGDQVIHPLAHTIEHEEFMEVIKIENMGHYREDMI 545

Query: 519 MP-RDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSP 577
           MP  D+FLLQLCSG+DEN+VGTCAEL+FAPIDASF+DD P+LPSGFRIIPLDS  +  SP
Sbjct: 546 MPAADIFLLQLCSGVDENSVGTCAELVFAPIDASFSDDGPILPSGFRIIPLDSRMDAPSP 605

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
           NRTLDLASALE+GPAG+RA+ + + +S   +SVMTIAF+FAFE H+Q++VA+MARQYVRS
Sbjct: 606 NRTLDLASALEVGPAGSRASGDNAGHSGNTKSVMTIAFQFAFEIHLQDNVASMARQYVRS 665

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
           II+SVQRVALALSPS   S +G R P GTPEA TLA WIC SYRCYLG DLLK  SEGSE
Sbjct: 666 IIASVQRVALALSPSRFGSNSGFRPPPGTPEAQTLAGWICQSYRCYLGGDLLK--SEGSE 723

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
           SILK+LWHH+DA++CCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDD+GRK LF
Sbjct: 724 SILKSLWHHSDAILCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGRKTLF 783

Query: 758 AEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +EFPQIMQQGF CLQGGIC+SSMGRP+SYERAVAWKVLNEEETAHCICFMFINWSFV
Sbjct: 784 SEFPQIMQQGFMCLQGGICMSSMGRPISYERAVAWKVLNEEETAHCICFMFINWSFV 840


>gi|147790308|emb|CAN61201.1| hypothetical protein VITISV_009744 [Vitis vinifera]
          Length = 839

 Score = 1413 bits (3657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 683/838 (81%), Positives = 744/838 (88%), Gaps = 35/838 (4%)

Query: 12  SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRC 71
           +LDNGKYVRYTPEQVEALERLYH+CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRC
Sbjct: 2   ALDNGKYVRYTPEQVEALERLYHDCPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 61

Query: 72  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDT 131
           REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQ+ TLAT DT
Sbjct: 62  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTQNATLATTDT 121

Query: 132 SCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           SCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD
Sbjct: 122 SCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 181

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           S+GIVAISHGC+GVAARACGLV LEPTRVAEILKD P                   G  I
Sbjct: 182 SIGIVAISHGCTGVAARACGLVSLEPTRVAEILKDWPSWYRECRNVDVLNVLSTGNGGTI 241

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 LYA TTLAPARDFWLLRYTSVLEDGSLVVCERSL N QNGP+MPPVQ+FVRAE 
Sbjct: 242 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQYFVRAEK 301

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST+LAQKTTMAALRQLRQ++
Sbjct: 302 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALRQLRQIS 361

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QEV+Q +  GWGRRPAALRAL QRL++GFNEAVNGFTDEGW++M +DG+DDVT+LVNSSP
Sbjct: 362 QEVSQPTNTGWGRRPAALRALGQRLTKGFNEAVNGFTDEGWSMMESDGIDDVTLLVNSSP 421

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
            K+MG+NLS+A+GFP++SNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD++ID YSAA
Sbjct: 422 AKMMGVNLSYASGFPSMSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAA 481

Query: 468 AIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEE-----------FMEVIKLEGVGHSPED 516
           A+K GPC+LP SR G +G QVILPLAHTIEHEE           FMEVIKLE V H  ED
Sbjct: 482 AVKAGPCTLPVSRAGGYGGQVILPLAHTIEHEEANLIRFNCLQQFMEVIKLENVDHYRED 541

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSS 576
            +M  D+FLLQLCSG+D+NAVGTC+ELIFAPIDASF+DDAPLLPSGFRIIPLDSG + SS
Sbjct: 542 LMMSGDVFLLQLCSGVDDNAVGTCSELIFAPIDASFSDDAPLLPSGFRIIPLDSGVDGSS 601

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
           PNRTLDLAS+LE+GPAGN+A+++ S ++   +SVMTI+F+FAFE H+QE+VA+MARQYVR
Sbjct: 602 PNRTLDLASSLEVGPAGNKASSDNSGHTGSAKSVMTISFQFAFEMHLQENVASMARQYVR 661

Query: 637 SIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS 696
           SIISSVQRVALALSPS    Q G R   GTPEA TLARWIC SYRCYLGV+LLK S+EG+
Sbjct: 662 SIISSVQRVALALSPSRFGPQMGFRPLPGTPEAHTLARWICQSYRCYLGVELLKPSNEGN 721

Query: 697 ESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKAL 756
           ESILK LWHH+DAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEK FDD+GRK L
Sbjct: 722 ESILKTLWHHSDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKTFDDNGRKTL 781

Query: 757 FAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            +EFPQIMQQGF CLQGG+CLSSMGRPVSYERAVAWKVL EE+ AHCICFMFINWSFV
Sbjct: 782 CSEFPQIMQQGFVCLQGGVCLSSMGRPVSYERAVAWKVLTEEDNAHCICFMFINWSFV 839


>gi|147792360|emb|CAN65768.1| hypothetical protein VITISV_018803 [Vitis vinifera]
          Length = 868

 Score = 1407 bits (3643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 711/878 (80%), Positives = 744/878 (84%), Gaps = 74/878 (8%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MAMSCKDGK G +DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MAMSCKDGK-GIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 59

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH
Sbjct: 60  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 119

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           TQ+TTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW
Sbjct: 120 TQNTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 179

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQMPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPTRVAEILKDRP            
Sbjct: 180 VQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVL 239

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I      LYA TTLAPARDFWL+  T     G    CE S        T 
Sbjct: 240 NVLPTANGGTIELLYMQLYAPTTLAPARDFWLV--TLYFCYGGWKSCEWS-----KHATS 292

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
                   A   P+   IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT
Sbjct: 293 AAFCESRNAAKWPT--CIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 350

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           MAALRQLRQ+AQEV+QS+V GWGRRPAALRALSQRLSRGFNEA+NGFTDEGW++MGNDG+
Sbjct: 351 MAALRQLRQIAQEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMMGNDGI 410

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLL------------------- 437
           DDVT+LVNSSP+KL GLNLSFANGFPAVSNAVLCAKASMLL                   
Sbjct: 411 DDVTILVNSSPEKLTGLNLSFANGFPAVSNAVLCAKASMLLQVKEEVHNLLTWGNQHLSL 470

Query: 438 --------------QNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGT 483
                         QNVPPAILLRFLREHRSEWADNNID YSAAA+KVGPCSLPGSRVG+
Sbjct: 471 FHLLVEFTSLFLIQQNVPPAILLRFLREHRSEWADNNIDAYSAAAVKVGPCSLPGSRVGS 530

Query: 484 FGSQVILPLAHTIEHEE------FMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAV 537
           FGSQVILPLAHTIEHEE      F+EVIKLEGVGH PEDA+MPRDMFLLQLCSGMDENAV
Sbjct: 531 FGSQVILPLAHTIEHEEASNLFIFLEVIKLEGVGHCPEDAMMPRDMFLLQLCSGMDENAV 590

Query: 538 GTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRAT 597
           GTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE SSPNRTLDLASALEIGPAGNR++
Sbjct: 591 GTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPNRTLDLASALEIGPAGNRSS 650

Query: 598 NNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQ 657
           N+YS N    RSVMTIAFEFAFESH+QE+VA+MARQYVRSIISSVQRVALALSPS++SS 
Sbjct: 651 NDYSVNGGNTRSVMTIAFEFAFESHLQENVASMARQYVRSIISSVQRVALALSPSHLSSH 710

Query: 658 AGLRTPLGTPEALTLARWICHSYRCYLGV-DLLKSSSEGSESILKNLWHHTDAVMCCSLK 716
           AGLR PLGTPEA TLARWI HSYRC   V        EGSE+ILK LWH +DA+MCCSLK
Sbjct: 711 AGLRPPLGTPEAHTLARWISHSYRCATWVWSYSNPVVEGSETILKTLWHLSDAIMCCSLK 770

Query: 717 ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGIC 776
           ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK L +EFPQIMQQGFACLQGGIC
Sbjct: 771 ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKTLCSEFPQIMQQGFACLQGGIC 830

Query: 777 LSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           LSSMGRPVSYERAVAWKVLNEEE AHC+CFMF+NWSFV
Sbjct: 831 LSSMGRPVSYERAVAWKVLNEEENAHCVCFMFMNWSFV 868


>gi|219879370|gb|ACL51017.1| class III HD-Zip protein 8 [Citrus trifoliata]
          Length = 829

 Score = 1404 bits (3635), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 679/831 (81%), Positives = 737/831 (88%), Gaps = 31/831 (3%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +DNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ+RRCR
Sbjct: 1   MDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQDRRCR 60

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ-STTLATKDT 131
           EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN +FRQ TQ + TLAT DT
Sbjct: 61  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDT 120

Query: 132 SCESVVTSGQHHLTPQ----HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
           SCESV TSGQHHLTPQ    HPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK
Sbjct: 121 SCESVATSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 180

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPR----------------GS 231
           PGPDS+GIVAISHGC+GVAARACGLVGL+PTRVAEILKDRP                 GS
Sbjct: 181 PGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGS 240

Query: 232 A--------ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           +         LYA TTLAPARDFWLLRYTSVLEDGSLVVCERSL N QNGP+MP   HFV
Sbjct: 241 SGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFV 300

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST++AQKTTMAALR L
Sbjct: 301 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHL 360

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ++QEV+Q SV GWGRRPAALRALSQRLSRGFNEA+NGFTDEGW+++ +DG+DDVTV V
Sbjct: 361 RQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHV 420

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NSSP K+MG+ LS+ NGFP++SNAVLCAKASMLLQ+VPPAILLRFLREHRSEWAD++ID 
Sbjct: 421 NSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDA 480

Query: 464 YSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDM 523
           YSAAA+K GPCSLP  R G FG QVILPLAHTIEHEEF+EVIKLE + H  ED IMP D+
Sbjct: 481 YSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDI 540

Query: 524 FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDL 583
           FLLQLCSG+DENAVG CAEL+FAPIDASF+DDAP++PSGFRIIPLDSGK+T SPNRTLDL
Sbjct: 541 FLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDL 600

Query: 584 ASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQ 643
           ASALE+GP GN+A+ + ST     +SV+TIAF+FAFE H+QE+VA+MARQYVR II+SVQ
Sbjct: 601 ASALEVGPTGNKASGDSSTQCGSKKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQ 660

Query: 644 RVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNL 703
           RVALALSPS   S AGLR P G+PEA TLARWIC SYRCYLG +LLK   EG+ESILK L
Sbjct: 661 RVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLK--CEGNESILKTL 718

Query: 704 WHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQI 763
           WHH+DAV+CCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFD+ GRK L +EFPQI
Sbjct: 719 WHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDESGRKTLCSEFPQI 778

Query: 764 MQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           MQQGF CLQ GICLSSMGRP+SYERAVAWKVLNEEE AHCICFMFINWSFV
Sbjct: 779 MQQGFMCLQSGICLSSMGRPISYERAVAWKVLNEEENAHCICFMFINWSFV 829


>gi|224142954|ref|XP_002324794.1| predicted protein [Populus trichocarpa]
 gi|60327633|gb|AAX19056.1| class III HD-Zip protein 7 [Populus trichocarpa]
 gi|222866228|gb|EEF03359.1| predicted protein [Populus trichocarpa]
          Length = 823

 Score = 1395 bits (3612), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 678/827 (81%), Positives = 736/827 (88%), Gaps = 29/827 (3%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +DNGKYVRYTPEQVEALERLYHECPKP+S RRQQLIRECPILS+IEPKQIKVWFQNRRCR
Sbjct: 1   MDNGKYVRYTPEQVEALERLYHECPKPTSTRRQQLIRECPILSHIEPKQIKVWFQNRRCR 60

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ-STTLATKDT 131
           EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN YFRQ TQ +TTLAT DT
Sbjct: 61  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYFRQQTQNATTLATTDT 120

Query: 132 SCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           SCESVVTSGQH LTPQHPPRDASPAGLLSIAEE L +FLSKATGTAVEWVQMPGMKPGPD
Sbjct: 121 SCESVVTSGQHRLTPQHPPRDASPAGLLSIAEENLAQFLSKATGTAVEWVQMPGMKPGPD 180

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           S+GIVAISHGC+GVAARACGLVGLEPTRVAEILKDRP                   G  I
Sbjct: 181 SIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVINAMSTANGGTI 240

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 LYA TTLAPARDF LLRYTSVLEDGSLVVCERSL N QNGP+MPP QHFVRAEM
Sbjct: 241 ELLYMQLYAPTTLAPARDFLLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPTQHFVRAEM 300

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST+LAQKTTMAALR LRQ++
Sbjct: 301 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALRHLRQIS 360

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE++Q +V GWGRRPAALRALSQRLS+GFNEAVNGF DEGW+++ +DG+DDVTVLVNSSP
Sbjct: 361 QEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFADEGWSLLESDGIDDVTVLVNSSP 420

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
            K MG+N S+ NGFP+++NAVLCAKASMLLQNVPPAILLRFLREHRSEWADN ID Y+A+
Sbjct: 421 TKTMGVNFSYDNGFPSMNNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNGIDAYAAS 480

Query: 468 AIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQ 527
           AIK GPCSLP SR G FG QVILPLAHTIE+EE  +VIKLE +G+  ED +MP D+FLLQ
Sbjct: 481 AIKAGPCSLPVSRAGNFGGQVILPLAHTIENEE-AKVIKLENMGYR-EDMLMPGDVFLLQ 538

Query: 528 LCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASAL 587
           LCSG+DENAVGTCAELIFAPIDASF+DDAP++PSGFRIIPLDSG + SSPNRTLDLASAL
Sbjct: 539 LCSGVDENAVGTCAELIFAPIDASFSDDAPIIPSGFRIIPLDSGMDASSPNRTLDLASAL 598

Query: 588 EIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVAL 647
           E+GPAGNRA+ + S  S C +SVMTIAF+FAFE H+QE+VA+MARQYVRSII+SVQRVAL
Sbjct: 599 EVGPAGNRASGDLSGRSGCTKSVMTIAFQFAFEMHLQENVASMARQYVRSIIASVQRVAL 658

Query: 648 ALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHT 707
           ALSPS+  S AG   P GTPEA TLARWIC SYR YLGV LLK  +EGS+SILK LWHH+
Sbjct: 659 ALSPSHFGSHAGFWPPHGTPEAHTLARWICESYRIYLGVKLLK--NEGSDSILKTLWHHS 716

Query: 708 DAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQG 767
           DA++CCSLK LPVFTF+NQAGLDMLETTLVALQDITLEKIFDD+GRK L +EFPQIMQQG
Sbjct: 717 DALVCCSLKTLPVFTFSNQAGLDMLETTLVALQDITLEKIFDDNGRKTLCSEFPQIMQQG 776

Query: 768 FACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           F CL GGICLSSMGRPVSYERAVAWKVLNEEE+AHCICFMF+NWSFV
Sbjct: 777 FMCLPGGICLSSMGRPVSYERAVAWKVLNEEESAHCICFMFMNWSFV 823


>gi|302398629|gb|ADL36609.1| BZIP domain class transcription factor [Malus x domestica]
          Length = 841

 Score = 1394 bits (3608), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 676/839 (80%), Positives = 741/839 (88%), Gaps = 31/839 (3%)

Query: 4   SCKDGKTG-SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           SCKDG     +DNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQI
Sbjct: 6   SCKDGGMKMQMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQI 65

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN YFRQHTQ
Sbjct: 66  KVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENTYFRQHTQ 125

Query: 123 STTLATKDTSCESVVTSGQHHLTPQH--PPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           + TLAT DTSCESVVTSGQHHLT Q   PPRDASPAGLLSIA+ETL EFLSKATGTAVEW
Sbjct: 126 NATLATTDTSCESVVTSGQHHLTAQQHPPPRDASPAGLLSIAQETLAEFLSKATGTAVEW 185

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQ+PGMKPGPDS+GIVAISHGC+GVAARACGLVGL+PTRVAEILKDRP            
Sbjct: 186 VQLPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWFRNCRSVDVA 245

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I      LYA TTLAPARDFWLLRYTSVLEDGSLVVCERSL N QNGP+M
Sbjct: 246 NVMSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSM 305

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           PPVQ+FVRAEMLPSGYLIRPCEGGGSI+HIVDHMDLEPWSVPEVLRPLYESST+LAQKTT
Sbjct: 306 PPVQNFVRAEMLPSGYLIRPCEGGGSILHIVDHMDLEPWSVPEVLRPLYESSTILAQKTT 365

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           MAALR LRQ++QEV+Q +  GWGRRPAALRALSQRLS+GFNEAVNGFTDEGW+V+ +DG+
Sbjct: 366 MAALRNLRQISQEVSQPNSAGWGRRPAALRALSQRLSKGFNEAVNGFTDEGWSVLESDGV 425

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           DDVT+LVNSSP K+M  NL + +G P++S AVLCAKASMLLQNVPPAILLRFLREHRSEW
Sbjct: 426 DDVTLLVNSSPGKMMSANL-YTDGVPSMSTAVLCAKASMLLQNVPPAILLRFLREHRSEW 484

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
           AD +ID YSAAA+K GPC++ G RVG+FG  VILPLAHTIEHEEFMEVIK+E +GH  ED
Sbjct: 485 ADRSIDAYSAAAVKAGPCNMLGPRVGSFGDNVILPLAHTIEHEEFMEVIKIENLGHYRED 544

Query: 517 AIMP-RDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS 575
            IMP  D+FLLQLCSG+DENAVGTC+EL+FAPIDASF+DDAP+LPSGFRIIPLDS  +T 
Sbjct: 545 MIMPAADIFLLQLCSGVDENAVGTCSELVFAPIDASFSDDAPILPSGFRIIPLDSRMDTP 604

Query: 576 SPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYV 635
           SPNRTLDLASALE+GPAG+RA+ + + +S   +SVMTIAF+FAFE H+QE+VA+MARQYV
Sbjct: 605 SPNRTLDLASALEVGPAGSRASGDNAGHSGNTKSVMTIAFQFAFEIHLQENVASMARQYV 664

Query: 636 RSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEG 695
           RSII+SVQRVALALSPS   S AG R P GTP+A TLA WIC SYRCYLG +LLK  +EG
Sbjct: 665 RSIIASVQRVALALSPSRFGSHAGFRPPPGTPQAQTLAGWICQSYRCYLGGELLK--TEG 722

Query: 696 SESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKA 755
           SESILK+LWHH DA++CCSLKA+P+FTF NQAGLDMLETTLVALQDITLEKIFDD+GRK 
Sbjct: 723 SESILKSLWHHPDAILCCSLKAMPIFTFGNQAGLDMLETTLVALQDITLEKIFDDNGRKT 782

Query: 756 LFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           L +EFPQIMQQGF C QGGIC+SSMGRP+SYERAVAWKVLNEEETAHCICFMFINWSFV
Sbjct: 783 LCSEFPQIMQQGFMCHQGGICMSSMGRPISYERAVAWKVLNEEETAHCICFMFINWSFV 841


>gi|206572107|gb|ACI13686.1| putative HB8 HD-ZipIII [Malus x domestica]
          Length = 844

 Score = 1390 bits (3599), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 680/841 (80%), Positives = 743/841 (88%), Gaps = 33/841 (3%)

Query: 4   SCKDGKTG-SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           SCKDG     +DNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQI
Sbjct: 7   SCKDGGMKMQMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQI 66

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYEN YFRQ TQ
Sbjct: 67  KVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYFRQQTQ 126

Query: 123 STTLATKDTSCESVVTSGQHHLTPQHPP----RDASPAGLLSIAEETLTEFLSKATGTAV 178
           + TLAT DTSC+SVVTSGQHHLTPQ  P    RDASPAGLLSIAEETL EFLSKATGTAV
Sbjct: 127 NATLATTDTSCDSVVTSGQHHLTPQQHPPPPPRDASPAGLLSIAEETLAEFLSKATGTAV 186

Query: 179 EWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP---------- 228
           EWVQ+PGMKPGPDS+GIVAISHGC+GVAARACGLVGL+PTRVAEILKDRP          
Sbjct: 187 EWVQLPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWFRNCRSVD 246

Query: 229 --------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGP 274
                    G  I      LYA TTLAPARDFWLLRYTSVLEDGSLVVCERSL N QNGP
Sbjct: 247 VLNVLSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGP 306

Query: 275 TMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 334
           +MPPVQ+FVRAEMLPSGYLIRPCEGGGSI+HIVDHMDLEPWSVPEVLRPLYESST+LAQK
Sbjct: 307 SMPPVQNFVRAEMLPSGYLIRPCEGGGSILHIVDHMDLEPWSVPEVLRPLYESSTLLAQK 366

Query: 335 TTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
           TTMAALR LRQ++QEV+Q +  GWGRRPAALRALSQRLS+GFNEAVNGFTDEGW+V+ +D
Sbjct: 367 TTMAALRNLRQISQEVSQPNSAGWGRRPAALRALSQRLSKGFNEAVNGFTDEGWSVLESD 426

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
           G+DDVT+LVNSSP K+M  NL + NG P++S AVLCAKASMLLQNVPPAILLRFLREHRS
Sbjct: 427 GVDDVTLLVNSSPGKMMSANL-YTNGVPSMSTAVLCAKASMLLQNVPPAILLRFLREHRS 485

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EWAD +ID YSAAAIK GPC++ G R G+FG QVILPLAHTIEHEEFMEVIK+E +GH  
Sbjct: 486 EWADRSIDAYSAAAIKAGPCNMLGPRAGSFGDQVILPLAHTIEHEEFMEVIKIENMGHYR 545

Query: 515 EDAIMP-RDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE 573
           ED +MP  D+FLLQLCSG+DENAVGTCAEL+FAPIDASF+DDAP+LPSGFRIIPLDS  +
Sbjct: 546 EDMMMPAADIFLLQLCSGVDENAVGTCAELVFAPIDASFSDDAPILPSGFRIIPLDSRMD 605

Query: 574 TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQ 633
           T SPNRTLDLASALE+GPAG+RA+ + + +S   +SVMTIAF+FAFE H+QE++A MARQ
Sbjct: 606 TPSPNRTLDLASALEVGPAGSRASGDNAGHSGNTKSVMTIAFQFAFEIHLQENIAAMARQ 665

Query: 634 YVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           YVRSII+SVQRVALALSPS+  S AG R P GTPEA TLA WIC SYRCYLG +LLK  +
Sbjct: 666 YVRSIIASVQRVALALSPSHFGSHAGFRPPPGTPEAQTLAGWICQSYRCYLGGELLK--T 723

Query: 694 EGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGR 753
           EGSESILK+LWHH+DA++CCSLKA+PVFTFANQAGLDMLETTLVALQDITLEKIFDD+GR
Sbjct: 724 EGSESILKSLWHHSDAILCCSLKAMPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGR 783

Query: 754 KALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
           K L +EFPQIMQQGF CLQGGIC+SSMGRP+SYERAVAWKVLNEEETAHCICFMFINWSF
Sbjct: 784 KTLCSEFPQIMQQGFMCLQGGICMSSMGRPISYERAVAWKVLNEEETAHCICFMFINWSF 843

Query: 814 V 814
           V
Sbjct: 844 V 844


>gi|449436888|ref|XP_004136224.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Cucumis
           sativus]
          Length = 842

 Score = 1382 bits (3577), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 664/838 (79%), Positives = 736/838 (87%), Gaps = 29/838 (3%)

Query: 4   SCKDG--KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQ 61
           +CKD   K  SLDNGKYVRYTPEQVEALERLY+ECPKPSS+RRQQLIRECPILSNIEPKQ
Sbjct: 7   ACKDAASKMSSLDNGKYVRYTPEQVEALERLYYECPKPSSMRRQQLIRECPILSNIEPKQ 66

Query: 62  IKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHT 121
           IKVWFQNRRCREKQRKEASRLQ VNRKLTAMN+LLMEENDRLQKQVSQLVYEN YFRQ T
Sbjct: 67  IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNRLLMEENDRLQKQVSQLVYENSYFRQQT 126

Query: 122 QSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWV 181
           Q+ TLAT DTSCESVVTSGQ +LTP HPP+DASPAGLLSIAEETL EFLSKATGTAVEWV
Sbjct: 127 QNATLATTDTSCESVVTSGQQNLTPPHPPKDASPAGLLSIAEETLAEFLSKATGTAVEWV 186

Query: 182 QMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------- 228
           QMPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPTRVAEILKD P             
Sbjct: 187 QMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDWPSWFRDCRAVDVLN 246

Query: 229 -----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMP 277
                 G  I      LYA TTLAPARDFWLLRYTSVLEDGSLVVCERSL N QNGP+MP
Sbjct: 247 VLSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMP 306

Query: 278 PVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTM 337
           PVQ+FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDL+PWSVPEVLRPLY+SST+LAQK TM
Sbjct: 307 PVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLDPWSVPEVLRPLYKSSTLLAQKNTM 366

Query: 338 AALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
           AALR LRQ++QEV+Q +V GWGRRPAALRALSQ+LSRGFNEAVNGFTDEGW+++ NDG+D
Sbjct: 367 AALRLLRQISQEVSQPNVTGWGRRPAALRALSQKLSRGFNEAVNGFTDEGWSLLENDGVD 426

Query: 398 DVTVLVNSSPDK-LMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           DVT+LVN S  K +MG N+S++NGFP++SNAVLCAKASMLLQNV PA+L+RFLREHRSEW
Sbjct: 427 DVTLLVNMSHGKTMMGANISYSNGFPSMSNAVLCAKASMLLQNVTPAMLIRFLREHRSEW 486

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
           AD++ID YSAAAIK G C LPGS  GTFG QVILPLA T+EHEEFMEV+K E VGH  +D
Sbjct: 487 ADSSIDAYSAAAIKTGQCGLPGSHAGTFGGQVILPLAQTVEHEEFMEVVKFENVGHYRDD 546

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSS 576
            +MP D+FLLQLC+G+DEN VGT AELIFAPIDASF+DDAP+LPSGFRIIPLDSG + SS
Sbjct: 547 MLMPGDIFLLQLCNGVDENTVGTSAELIFAPIDASFSDDAPILPSGFRIIPLDSGMDASS 606

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
           PNRTLDLASAL++GPAGNRA+ + +  S   +SVMTIAF+F F+ H+Q++VA MARQYVR
Sbjct: 607 PNRTLDLASALDVGPAGNRASGDCAGQSGKSKSVMTIAFQFVFDVHLQDNVAAMARQYVR 666

Query: 637 SIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS 696
           SII+SVQRVALALSPSN    A L+TP G PEA TLARWI  SYRCY+G++LLK  +EG 
Sbjct: 667 SIIASVQRVALALSPSNFGPHANLQTPAGAPEAQTLARWITQSYRCYMGMELLK--NEGR 724

Query: 697 ESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKAL 756
           ES+LK+LWHH+DAVMCCSLKALP FTFANQ+GLDMLETTLVALQDITLEKIFDD+G+K L
Sbjct: 725 ESVLKSLWHHSDAVMCCSLKALPNFTFANQSGLDMLETTLVALQDITLEKIFDDNGKKTL 784

Query: 757 FAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            +EFP+IMQQGF CLQGG+CLSSMGR VSYE+AVAWKVLNEEE AHCICFMF+NWSFV
Sbjct: 785 ASEFPRIMQQGFICLQGGVCLSSMGRAVSYEKAVAWKVLNEEENAHCICFMFMNWSFV 842


>gi|38198211|dbj|BAD01502.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 838

 Score = 1378 bits (3567), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 674/841 (80%), Positives = 735/841 (87%), Gaps = 30/841 (3%)

Query: 1   MAMSCKDG-KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           M+MSCKDG K   +DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP
Sbjct: 1   MSMSCKDGGKCTIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 60

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 119
           KQIKVWFQNRRCREKQRKEASRLQ+VNRKLTAMNKLLMEENDRLQKQVS LVYENG FRQ
Sbjct: 61  KQIKVWFQNRRCREKQRKEASRLQSVNRKLTAMNKLLMEENDRLQKQVSHLVYENGCFRQ 120

Query: 120 HTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 179
           HTQ+  LATKDTSCESVVTSGQ HLTPQHPP DASPAGLLSIAEETLTEFLSKATGTAVE
Sbjct: 121 HTQNGALATKDTSCESVVTSGQRHLTPQHPPGDASPAGLLSIAEETLTEFLSKATGTAVE 180

Query: 180 WVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR------------ 227
           WVQMPGMKPGPDS+GIV+ISHGC+GVAARACGLV LEPTRVAEILKDR            
Sbjct: 181 WVQMPGMKPGPDSIGIVSISHGCTGVAARACGLVSLEPTRVAEILKDRTSWYRDCRAVDV 240

Query: 228 ------PRGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPT 275
                   G  I      LYA TTLA  RDF LLRYTSV+EDGSLVVCERSL N  NG +
Sbjct: 241 LDVLPTANGGTIELLYMQLYAPTTLATGRDFLLLRYTSVIEDGSLVVCERSLANTPNGQS 300

Query: 276 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 335
           +P V +FVRAEMLPSGYLIRPCEGGGSIIHIVDHM+LE WSVPEVLRPLYESSTV+AQKT
Sbjct: 301 IPSVPNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEAWSVPEVLRPLYESSTVIAQKT 360

Query: 336 TMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDG 395
           TM ALRQLRQ+AQEV+Q++   WGRRPAALRALSQRLSRGFNEAVNGFTDEGW++  NDG
Sbjct: 361 TMMALRQLRQIAQEVSQTNTPNWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSLTSNDG 420

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLL-QNVPPAILLRFLREHRS 454
           MDDVT+ VNSSP+KLMGLNLSF+NG+P+++ AVLCAKASMLL  NVPPA+LLRFLREHRS
Sbjct: 421 MDDVTIHVNSSPEKLMGLNLSFSNGYPSLNTAVLCAKASMLLPPNVPPALLLRFLREHRS 480

Query: 455 EWAD-NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHS 513
           EWAD NN+D YSAAA+K+GPCSL G+R G FG QVILPLA TIEHEE +EVIKLEGVG  
Sbjct: 481 EWADNNNVDAYSAAAVKLGPCSLLGTRAGNFGGQVILPLAQTIEHEELLEVIKLEGVGLC 540

Query: 514 PEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE 573
           PEDA+M RDMF LQLCSG+DENAVG C+ELIFAPIDASFADDAPLLPSGFRI+PLDS K 
Sbjct: 541 PEDALMGRDMFFLQLCSGIDENAVGMCSELIFAPIDASFADDAPLLPSGFRIMPLDSCKG 600

Query: 574 TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQ 633
            SSPNRTLDLASALE+  A N+A  + +  ++C RSVMTIA EFAFESHMQE VA MARQ
Sbjct: 601 DSSPNRTLDLASALEVRGAANKAAGDRNVGNSCARSVMTIALEFAFESHMQESVAAMARQ 660

Query: 634 YVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           YVRSIISSVQRVA ALSP   S   GL++PLGTPEA TLARWI HSYRCYLG +LL+   
Sbjct: 661 YVRSIISSVQRVASALSP---SPNGGLQSPLGTPEAHTLARWISHSYRCYLGAELLEGVG 717

Query: 694 EGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGR 753
           EGS+SILK++WHH+DA++CCSLK +PVFTFANQ GLDMLETTLVALQDI+LEKI D++GR
Sbjct: 718 EGSDSILKSMWHHSDAIVCCSLKGMPVFTFANQGGLDMLETTLVALQDISLEKILDENGR 777

Query: 754 KALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
           K L++EFPQIMQQGFACLQGGIC+SSMGRPVSYERAVAWKV+NE+ET HCICFMFINWSF
Sbjct: 778 KVLWSEFPQIMQQGFACLQGGICVSSMGRPVSYERAVAWKVVNEDETPHCICFMFINWSF 837

Query: 814 V 814
           V
Sbjct: 838 V 838


>gi|356515619|ref|XP_003526496.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Glycine
           max]
          Length = 845

 Score = 1377 bits (3565), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 674/846 (79%), Positives = 739/846 (87%), Gaps = 34/846 (4%)

Query: 1   MAMS--CKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIE 58
           MA+S  CKDG   +LDNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIE
Sbjct: 2   MAVSSACKDGSKVALDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIE 61

Query: 59  PKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFR 118
           PKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN +FR
Sbjct: 62  PKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSFFR 121

Query: 119 Q--HTQSTTLATKDT--SCESVVTSGQHHLTPQ-HPPRDASPAGLLSIAEETLTEFLSKA 173
           Q  H  + TLAT DT  SCESVVTSGQ +LTPQ HPPRDASPAGLLSIAEETL EFLSKA
Sbjct: 122 QQTHNNNATLATTDTNTSCESVVTSGQRNLTPQQHPPRDASPAGLLSIAEETLAEFLSKA 181

Query: 174 TGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR------ 227
           TGTAVEWVQMPGMKPGPDS+GIVAISHGC GVAARACGLVGLEPTRVAEILKDR      
Sbjct: 182 TGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDRLSWFRD 241

Query: 228 ------------PRGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKN 269
                         G  I      LYA TTLAP RDFWLLRYTS+LEDGS VVCERSL N
Sbjct: 242 CRTVDVLNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSFVVCERSLNN 301

Query: 270 IQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 329
            QNGP MPPVQHFVRA+MLPSGYLIRPCEGGGSIIHIVDHM LEPWSVPEVLRPLYESS 
Sbjct: 302 TQNGPAMPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMVLEPWSVPEVLRPLYESSM 361

Query: 330 VLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT 389
           +LAQ+TTMAALR LRQ++QEV+Q SV GWGRRPAALRALSQRLS+GFNEAVNGF D+GW+
Sbjct: 362 LLAQRTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGFADDGWS 421

Query: 390 VMGNDGMDDVTVLVNSSPDKLMGLNLSFAN-GFPAVSNAVLCAKASMLLQNVPPAILLRF 448
           ++ +DG+DDVT+LVNSSP K+MG++L + N GFP+VS++VLCAKASMLLQNVPPAILLRF
Sbjct: 422 MLESDGIDDVTLLVNSSPSKMMGVSLVYNNNGFPSVSSSVLCAKASMLLQNVPPAILLRF 481

Query: 449 LREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLE 508
           LREHRSEWAD++ID YSAAAIK GPCSLPG+R G FG QVILPLAHTIEHEEFMEVIKLE
Sbjct: 482 LREHRSEWADSSIDAYSAAAIKAGPCSLPGARSGGFGGQVILPLAHTIEHEEFMEVIKLE 541

Query: 509 GVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPL 568
            +G+  +D  +P D+FLLQLCSG+DE+AVGT AEL+FAPIDASF+DDAP+LPSGFRIIPL
Sbjct: 542 NMGYYRDDMSIPGDVFLLQLCSGVDEHAVGTSAELVFAPIDASFSDDAPILPSGFRIIPL 601

Query: 569 DSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVA 628
           DSG + +SPNRTLDLASALE+G   N+A ++ S +S   +SVMTIAF+FAFE H+QE++A
Sbjct: 602 DSGTDAASPNRTLDLASALEVGTTANKAASDNSAHSGSTKSVMTIAFQFAFEVHLQENIA 661

Query: 629 TMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDL 688
           TMARQYVRSII+SVQRV+LALSPS   S      P GTPEA TLARWIC+SYR YLGV+L
Sbjct: 662 TMARQYVRSIIASVQRVSLALSPSRFGSHNAFHLPPGTPEAQTLARWICNSYRFYLGVEL 721

Query: 689 LKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIF 748
           LK   EGSESILK+LWHH+DAV+CCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIF
Sbjct: 722 LK--CEGSESILKSLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIF 779

Query: 749 DDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMF 808
           DD+G+K L  EFPQIMQQGF C+QGGICLSSMGRPVSYERAVAWKVLNEEE+AHCICFMF
Sbjct: 780 DDNGKKTLCTEFPQIMQQGFMCIQGGICLSSMGRPVSYERAVAWKVLNEEESAHCICFMF 839

Query: 809 INWSFV 814
           INWSFV
Sbjct: 840 INWSFV 845


>gi|357466691|ref|XP_003603630.1| Class III HD-Zip protein [Medicago truncatula]
 gi|355492678|gb|AES73881.1| Class III HD-Zip protein [Medicago truncatula]
          Length = 834

 Score = 1373 bits (3554), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 666/840 (79%), Positives = 736/840 (87%), Gaps = 32/840 (3%)

Query: 1   MAMS--CKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIE 58
           MA+S  CKDG   ++DNGKYVRYTPEQVEALERLYHECPKP+S+RRQQLIRECPILS+IE
Sbjct: 1   MAVSSGCKDGSKIAMDNGKYVRYTPEQVEALERLYHECPKPTSLRRQQLIRECPILSHIE 60

Query: 59  PKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFR 118
           PKQIKVWFQNRRCREKQRKEA RLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN +FR
Sbjct: 61  PKQIKVWFQNRRCREKQRKEAGRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENTFFR 120

Query: 119 QHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAV 178
           QHTQ+TTLAT DTSCESVVTSGQ H  PQ  PRDASPAGLLSIAEETL EFLSKATGTAV
Sbjct: 121 QHTQNTTLATTDTSCESVVTSGQQH--PQ--PRDASPAGLLSIAEETLAEFLSKATGTAV 176

Query: 179 EWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR----------- 227
           EWVQMPGMKPGPDS+GIVAISHG  GVAARACGLVGLEP RVAEILKDR           
Sbjct: 177 EWVQMPGMKPGPDSIGIVAISHGSPGVAARACGLVGLEPARVAEILKDRLSWYRDCRTVD 236

Query: 228 -------PRGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGP 274
                    G  I      LYA TTLAP RDFWLLRYTS+LEDGSLVVCERSL N QNGP
Sbjct: 237 VLNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGP 296

Query: 275 TMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 334
           +MPPV HFVRAE+LPSGYLIRPCEGGGSIIHIVDHM LEPWSVPEVLRPLYESS +LAQ+
Sbjct: 297 SMPPVPHFVRAEVLPSGYLIRPCEGGGSIIHIVDHMLLEPWSVPEVLRPLYESSMLLAQR 356

Query: 335 TTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
           TTMAALR LRQ++QEV+Q SV GWGRRPAALRALSQRLS+GFNEAVNGFTD+GW+++ +D
Sbjct: 357 TTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGFTDDGWSMLDSD 416

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
           G+DDVT+LVNSSP K+MGLNL + NGFP+V+++VLCAKASMLLQNVPPAILLRFLREHRS
Sbjct: 417 GIDDVTLLVNSSPSKMMGLNLGYNNGFPSVTSSVLCAKASMLLQNVPPAILLRFLREHRS 476

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EWAD +ID YSAAAIK GPCSLPG+R G FG QVILPLAHTIEHEEFMEVIKLE +G+  
Sbjct: 477 EWADTSIDAYSAAAIKAGPCSLPGARTGAFGGQVILPLAHTIEHEEFMEVIKLENMGYYR 536

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET 574
           +D  MP D+FLLQLCSG+DE+AVGT AELIFAPIDASF+DDAP+LPSGFRIIPL+SG + 
Sbjct: 537 DDMTMPGDIFLLQLCSGVDEHAVGTSAELIFAPIDASFSDDAPILPSGFRIIPLESGTDA 596

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
           +SPNRTLDLASALE+G  GN+A  + S +S   +SVMTIAF+FAFE+H+Q+++A MARQY
Sbjct: 597 ASPNRTLDLASALEVGTTGNKAGGDNSGHSGITKSVMTIAFQFAFEAHLQDNIAAMARQY 656

Query: 635 VRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
           VRSI++SVQRV+LALSPS   SQ     P GTPEA TL RWIC+SYR YLG +LLK   E
Sbjct: 657 VRSIVASVQRVSLALSPSRFGSQNAFPLPPGTPEAQTLTRWICNSYRFYLGAELLK--CE 714

Query: 695 GSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 754
           GSESILK+LWHH+DAV+CCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDD+G+K
Sbjct: 715 GSESILKSLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKK 774

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            L +EFPQIMQQGF C+QGGICLSSMGRP++YERAVAWKVLNEEE+AHCICFMFINWSFV
Sbjct: 775 TLCSEFPQIMQQGFMCIQGGICLSSMGRPITYERAVAWKVLNEEESAHCICFMFINWSFV 834


>gi|356507931|ref|XP_003522716.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Glycine
           max]
          Length = 844

 Score = 1372 bits (3550), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/840 (79%), Positives = 734/840 (87%), Gaps = 31/840 (3%)

Query: 4   SCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           +CKDG   +LDNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQIK
Sbjct: 7   ACKDGSKVALDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPKQIK 66

Query: 64  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQS 123
           VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN +FRQ T +
Sbjct: 67  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSFFRQQTHN 126

Query: 124 T-TLATKDT--SCESVVTSGQHHLTPQ-HPPRDASPAGLLSIAEETLTEFLSKATGTAVE 179
             TLAT DT  SCESVVTSGQ +LTPQ HPPRDASPAGLLSIAEETL EFLSKATGTAVE
Sbjct: 127 NATLATTDTNTSCESVVTSGQRNLTPQQHPPRDASPAGLLSIAEETLAEFLSKATGTAVE 186

Query: 180 WVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR------------ 227
           WVQMPGMKPGPDS+GIVAISHGC GVAARACGLVGLEP RVAEILKDR            
Sbjct: 187 WVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPARVAEILKDRLSWFRDCRTVDV 246

Query: 228 ------PRGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPT 275
                   G  I      LYA TTLAP RDFWLLRYTS+LEDGSLVVCERSL N QNGP 
Sbjct: 247 LNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPA 306

Query: 276 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 335
           MPPVQHFVRA+ML SGYLIRPCEGGGSIIHIVDHM LEPWSVPEVLRPLYESS +LAQ+T
Sbjct: 307 MPPVQHFVRADMLASGYLIRPCEGGGSIIHIVDHMVLEPWSVPEVLRPLYESSMLLAQRT 366

Query: 336 TMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDG 395
           TMAALR LRQ++QEV+Q SV GWGRRPAALRALSQRLS+GFNEAVNGF D+GW+++ +DG
Sbjct: 367 TMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGFADDGWSMLESDG 426

Query: 396 MDDVTVLVNSSPDKLMGLNLSFAN-GFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
           +DDVT+LVNSSP K+MG+NL + N GFP+VS+++LCAKASMLLQNVPPAILLRFLREHRS
Sbjct: 427 IDDVTLLVNSSPSKMMGVNLGYNNNGFPSVSSSLLCAKASMLLQNVPPAILLRFLREHRS 486

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EWAD++ID YSAAAIK GPCSLPG+R G FG QVILPLAHTIEHEEFMEVIKLE +G+  
Sbjct: 487 EWADSSIDAYSAAAIKAGPCSLPGARPGGFGGQVILPLAHTIEHEEFMEVIKLENMGYYR 546

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET 574
           +D  +P D+FLLQLCSG+DE+AVGT AEL+FAPIDASF+DDAP+LPSGFRIIPLDSG + 
Sbjct: 547 DDMNIPGDVFLLQLCSGVDEHAVGTSAELVFAPIDASFSDDAPILPSGFRIIPLDSGTDA 606

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
           +SPNRTLDLASALE+G   N+A  + S +S   +SVMTIAF+FAFE H+QE++ATMARQY
Sbjct: 607 ASPNRTLDLASALEVGTTANKAAGDNSGHSGSTKSVMTIAFQFAFEVHLQENIATMARQY 666

Query: 635 VRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
           VRSII+SVQRV+LALSPS   S      P GTPEA TLARWIC+SYR YLGV+LLK   E
Sbjct: 667 VRSIIASVQRVSLALSPSRFGSHNAFHLPPGTPEAQTLARWICNSYRFYLGVELLK--CE 724

Query: 695 GSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 754
           GSESILK+LWHH+DAV+CCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDD+G+K
Sbjct: 725 GSESILKSLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKK 784

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            L  EFPQIMQQGF C+QGGICLSSMGRPVSYERAVAWKVLNEEE+AHCICFMFINWSFV
Sbjct: 785 TLCTEFPQIMQQGFMCIQGGICLSSMGRPVSYERAVAWKVLNEEESAHCICFMFINWSFV 844


>gi|18076738|emb|CAC84276.1| HD-Zip protein [Zinnia violacea]
          Length = 838

 Score = 1369 bits (3543), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/841 (79%), Positives = 732/841 (87%), Gaps = 30/841 (3%)

Query: 1   MAMSCKDG-KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           M+MSCKDG K   +DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP
Sbjct: 1   MSMSCKDGGKCTIMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 60

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 119
           KQIKVWFQNRRCREKQRKEASRLQ+VNRKLTAMNKLLMEENDRLQKQVS LVYENG FRQ
Sbjct: 61  KQIKVWFQNRRCREKQRKEASRLQSVNRKLTAMNKLLMEENDRLQKQVSHLVYENGCFRQ 120

Query: 120 HTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 179
           HTQ+  LATKDTSCESVVTSGQ HLTPQHPP DASPAGLLSIAEETLTEFLSKATGTAVE
Sbjct: 121 HTQNGALATKDTSCESVVTSGQRHLTPQHPPGDASPAGLLSIAEETLTEFLSKATGTAVE 180

Query: 180 WVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR------------ 227
           WVQMPGMKPGPDS+GIV+ISHGC+GVAARACGLV LEPTRVAEILKDR            
Sbjct: 181 WVQMPGMKPGPDSIGIVSISHGCTGVAARACGLVSLEPTRVAEILKDRTSWYRDCRAVDV 240

Query: 228 ------PRGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPT 275
                   G  I      LYA TTLA  RDF LLRYTSV+EDGSLVVCERSL N  NG +
Sbjct: 241 LDVLPTANGGTIELLYMQLYAPTTLATGRDFLLLRYTSVIEDGSLVVCERSLANTPNGQS 300

Query: 276 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 335
           +P V +FVRAEMLPSGYLIRPCEGGGSIIHIVDHM+LE WSVPEVLRPLYESSTV+AQKT
Sbjct: 301 IPSVPNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEAWSVPEVLRPLYESSTVIAQKT 360

Query: 336 TMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDG 395
           TM ALRQLRQ+AQEV+Q++   WGRRPAALRALSQRLSRGFNEAVNGFTDEGW++  NDG
Sbjct: 361 TMMALRQLRQIAQEVSQTNTPNWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSLTSNDG 420

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLL-QNVPPAILLRFLREHRS 454
           MDDVT+ VNSSP+KLMGLNLSF+NG+P+++ AVLCAKASMLL  NVPPA+LLRFLREHRS
Sbjct: 421 MDDVTIHVNSSPEKLMGLNLSFSNGYPSLNTAVLCAKASMLLPPNVPPALLLRFLREHRS 480

Query: 455 EWAD-NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHS 513
           EWAD NN+D YSAAA+K+GPCSL G+R G FG QVILPLA TIEHEE +EVIKLEGVG  
Sbjct: 481 EWADNNNVDAYSAAAVKLGPCSLLGTRAGNFGGQVILPLAQTIEHEELLEVIKLEGVGLC 540

Query: 514 PEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE 573
           PEDA+M RDMF LQLCSG+DENAVG C+ELIFAPIDASFADDAPLLPSGFRI+PLDS K 
Sbjct: 541 PEDALMGRDMFFLQLCSGIDENAVGMCSELIFAPIDASFADDAPLLPSGFRIMPLDSCKG 600

Query: 574 TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQ 633
            SSPNRTLDLASALE+  A N+A  + +  ++C RSVMTIA EFAFESHMQE VA MARQ
Sbjct: 601 DSSPNRTLDLASALEVRGAANKAAGDRNVGNSCARSVMTIALEFAFESHMQESVAAMARQ 660

Query: 634 YVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           YVRSIISSVQRVA ALSP   S   GL++PLGTPEA TLARWI HSYRCYLG +LL+   
Sbjct: 661 YVRSIISSVQRVASALSP---SPNGGLQSPLGTPEAHTLARWISHSYRCYLGAELLEGVG 717

Query: 694 EGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGR 753
           EGS+SILK++WHH+DA++CCSLK +PVF FANQ GLDMLE  LVALQDI+L+KI D++GR
Sbjct: 718 EGSDSILKSMWHHSDAIVCCSLKGMPVFPFANQGGLDMLEPPLVALQDISLKKILDENGR 777

Query: 754 KALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
           K L++EFPQIMQQGFACLQGGIC+SSMGRPVSYERAVAWKV+NE+ET HCICFMFINWSF
Sbjct: 778 KVLWSEFPQIMQQGFACLQGGICVSSMGRPVSYERAVAWKVVNEDETPHCICFMFINWSF 837

Query: 814 V 814
           V
Sbjct: 838 V 838


>gi|145324911|ref|NP_001077702.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|332194641|gb|AEE32762.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 794

 Score = 1367 bits (3538), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 671/792 (84%), Positives = 712/792 (89%), Gaps = 30/792 (3%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MAMSCKDGK G LDNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MAMSCKDGKLGCLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV+EN YFRQH
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQH 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           T + +L  KDTSCESVVTSGQH L  Q+P RDASPAGLLSIAEETL EFLSKATGTAVEW
Sbjct: 121 TPNPSLPAKDTSCESVVTSGQHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEW 180

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQMPGMKPGPDS+GI+AISHGC+GVAARACGLVGLEPTRVAEI+KDRP            
Sbjct: 181 VQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVM 240

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  +      LYA TTLAP RDFWLLRYTSVLEDGSLVVCERSLK+ QNGP+M
Sbjct: 241 NVLPTANGGTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSM 300

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           P VQ+FVRAEML SGYLIRPC+GGGSIIHIVDHMDLE  SVPEVLRPLYES  VLAQKTT
Sbjct: 301 PLVQNFVRAEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTT 360

Query: 337 MAALRQLRQMAQEVTQ--SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
           MAALRQL+Q+AQEVTQ  SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW+V+G D
Sbjct: 361 MAALRQLKQIAQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-D 419

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
            MDDVT+ VNSSPDKLMGLNL+FANGF  VSN VLCAKASMLLQNVPPAILLRFLREHRS
Sbjct: 420 SMDDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRS 479

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EWADNNID Y AAA+KVGPCS   +RVG FG QVILPLAHTIEHEEFMEVIKLEG+GHSP
Sbjct: 480 EWADNNIDAYLAAAVKVGPCS---ARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSP 536

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET 574
           EDAI+PRD+FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS KE 
Sbjct: 537 EDAIVPRDIFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEV 596

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
           SSPNRTLDLASALEIG AG +A+ + S NSTC RSVMTIAFEF  ESHMQEHVA+MARQY
Sbjct: 597 SSPNRTLDLASALEIGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQY 656

Query: 635 VRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
           VR IISSVQRVALALSPS+ISSQ GLRTPLGTPEA TLARWIC SYR Y+GV+LLKS+S+
Sbjct: 657 VRGIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSD 716

Query: 695 GSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 754
           G+ESILKNLWHHTDA++CCS+KALPVFTFANQAGLDMLETTLVALQDI+LEKIFDD+GRK
Sbjct: 717 GNESILKNLWHHTDAIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRK 776

Query: 755 ALFAEFPQIMQQ 766
            L +EFPQIMQQ
Sbjct: 777 TLCSEFPQIMQQ 788


>gi|89514865|gb|ABD75307.1| class III homeodomain-leucine zipper protein C3HDZ2 [Ginkgo biloba]
          Length = 843

 Score = 1354 bits (3505), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/838 (76%), Positives = 733/838 (87%), Gaps = 30/838 (3%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           KDGK G +D GKYVRYT EQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEPKQIKVW
Sbjct: 7   KDGKAG-MDPGKYVRYTAEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVW 65

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ  Q+ +
Sbjct: 66  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQLQNAS 125

Query: 126 LATKDTSCESVVTSGQH----HLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWV 181
           +AT DTSCESVVTSGQH    HLT +HPPRDASPAGLLSIAEETLTEFLSKATGTAVEW+
Sbjct: 126 IATTDTSCESVVTSGQHQQQNHLTARHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWI 185

Query: 182 QMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------- 228
           QMPGMKPGPDS+GIVAISHGC+GVAARACGLVG+EPT+VAEILKDRP             
Sbjct: 186 QMPGMKPGPDSIGIVAISHGCTGVAARACGLVGIEPTKVAEILKDRPSWFRDCRCVDVLT 245

Query: 229 -----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMP 277
                 G  +      +YA TTLA ARDFW LRYTSVLEDGSLVVCERSL   Q GP+MP
Sbjct: 246 AFSTGNGGTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQGGPSMP 305

Query: 278 PVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTM 337
           PVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK TM
Sbjct: 306 PVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTM 365

Query: 338 AALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
           AALR LRQ+AQEV+   V GWGR+PAALR  SQRL +GFNEAVNGFTD+GW++MGNDG D
Sbjct: 366 AALRHLRQIAQEVSCDVVLGWGRQPAALRTFSQRLGKGFNEAVNGFTDDGWSLMGNDGTD 425

Query: 398 DVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWA 457
           DVT+L+NSSP+K++G  L+ + GFPA+   +LCAKASMLLQNVPPA+L+RFLREHRSEWA
Sbjct: 426 DVTILINSSPNKILGSQLASSEGFPALGGGILCAKASMLLQNVPPALLVRFLREHRSEWA 485

Query: 458 DNNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
           D+NID YSAAA+K  PCS+P SR+G FG  QVILPLAHT+EHEEF+EVIKLEG G + E+
Sbjct: 486 DSNIDAYSAAALKASPCSVPSSRIGGFGGGQVILPLAHTVEHEEFLEVIKLEGNGLTQEE 545

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSS 576
           A++ R+MFLLQLCSG+DENAVG CAEL+FAPIDASFAD+APLLPSGFR+IPLDSG + SS
Sbjct: 546 ALLSREMFLLQLCSGVDENAVGACAELVFAPIDASFADNAPLLPSGFRVIPLDSGVDGSS 605

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
           PNRTLDLASALEIGPAG R + +Y  NS  +RSV+TIAF+F +E+H++E+VA+MARQYVR
Sbjct: 606 PNRTLDLASALEIGPAGTRVSGDYGGNSGNLRSVLTIAFQFTYENHLRENVASMARQYVR 665

Query: 637 SIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS 696
           S+++SVQRVA+AL+PS +SS  G R P GTPEALTLARWICHSYR +LGV+LL+++ E +
Sbjct: 666 SVVASVQRVAMALAPSRLSSHLGPRPPPGTPEALTLARWICHSYRFHLGVELLRANCEAN 725

Query: 697 ESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKAL 756
           ES+LK LWHH+DA++CCSLK+LPVFTFANQAGLDMLETTLVALQDI+LEKI DD+GRK+L
Sbjct: 726 ESVLKMLWHHSDAIICCSLKSLPVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKSL 785

Query: 757 FAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            ++F QIMQQG+A L  GIC+SSMGRPVSY+RA+AWKVLN+EE+ HCI FMF+NWSFV
Sbjct: 786 CSDFAQIMQQGYAYLPAGICVSSMGRPVSYDRAIAWKVLNDEESTHCIAFMFMNWSFV 843


>gi|89514875|gb|ABD75312.1| class III homeodomain-leucine zipper protein C3HDZ2 [Taxus globosa]
          Length = 843

 Score = 1313 bits (3397), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/844 (74%), Positives = 723/844 (85%), Gaps = 31/844 (3%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MA++C     G +D GKYVRYT EQVEALERLY +CPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MAVTCGKEGKGGMDPGKYVRYTAEQVEALERLYRDCPKPSSIRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQ 120

Query: 121 TQSTTLATKDT-SCESVVTSGQH----HLTPQHPPRDASPAGLLSIAEETLTEFLSKATG 175
            Q+ ++AT D  SCESVVTSGQH    HLTP+ PPRDASPAGLLSIAEETLTEFLSKATG
Sbjct: 121 LQNASIATTDNNSCESVVTSGQHQQQNHLTPRQPPRDASPAGLLSIAEETLTEFLSKATG 180

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------- 228
           TAVEW+QMPGMKPGPD++GIVAISHGC+GVAARACGLVGLEPT+VAEILKDRP       
Sbjct: 181 TAVEWIQMPGMKPGPDAIGIVAISHGCTGVAARACGLVGLEPTKVAEILKDRPSWFRDCR 240

Query: 229 -----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  +      +YA TTLAPARDF  LRYTSV+EDGSLVVCERSL + +
Sbjct: 241 SVDVLTAFSTGNGGTVEILYMQMYAPTTLAPARDFCTLRYTSVMEDGSLVVCERSLSD-K 299

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
             P+MPPV HFVRAEM PSGYLIRPCEGG SIIHIVDHMDLEPWSVPEVLRPLYESS VL
Sbjct: 300 GSPSMPPVPHFVRAEMFPSGYLIRPCEGGSSIIHIVDHMDLEPWSVPEVLRPLYESSAVL 359

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQ+TTMAALR+LRQ+AQEV+   V GWGR+PAALR  SQRL +GFNEA+NGFTD+GW++M
Sbjct: 360 AQRTTMAALRRLRQVAQEVSSDMVLGWGRQPAALRMFSQRLCKGFNEAINGFTDDGWSLM 419

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           G+DGMDDVT+L+NSSP KL+G  L+  +G PA    +LCAKASMLLQNVPP++L+RFLRE
Sbjct: 420 GSDGMDDVTILINSSPSKLLGSQLASTDGLPAFGGGILCAKASMLLQNVPPSLLVRFLRE 479

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGV 510
           HRSEWAD+NID YSAAA+K  PC++P SR+G FG  QVILPLAHT+EHEEF+EVIKLE  
Sbjct: 480 HRSEWADSNIDAYSAAALKASPCAVPTSRIGGFGGGQVILPLAHTVEHEEFLEVIKLECN 539

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
           G + E+A++ RDMFLLQLCSG+DENAVG CAEL+FAPIDAS  D APLLPSGFR+IPLDS
Sbjct: 540 GLTQEEALLSRDMFLLQLCSGIDENAVGACAELVFAPIDASLTDSAPLLPSGFRVIPLDS 599

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
           G ++SSPNRTLDLASAL++GP GNR   +Y  NS+ +RSV+TIAF+F +E+H++E+VA+M
Sbjct: 600 GIDSSSPNRTLDLASALDVGPTGNRPAGDYGGNSSNIRSVLTIAFQFTYENHLRENVASM 659

Query: 631 ARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLK 690
           ARQYVR++++SVQRVA+AL+PS + S  G R P GTPEALTLARWIC SYR +LGV+LL+
Sbjct: 660 ARQYVRNVVASVQRVAMALAPSRLGSHLGPRPPPGTPEALTLARWICQSYRFHLGVELLR 719

Query: 691 SSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDD 750
            +SE +ES+LK LWHH+DA+MCCSLKALPVFTFANQAGLDMLETTLVALQDI+LEKI D+
Sbjct: 720 PNSEVNESVLKMLWHHSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDISLEKILDE 779

Query: 751 HGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFIN 810
           +GRK+LF++F QIMQQG+A L  GIC+SSMGRPVSY+RA+AWKVLNEE+  HC+ FMF+N
Sbjct: 780 NGRKSLFSDFTQIMQQGYAYLPAGICVSSMGRPVSYDRAIAWKVLNEEDNTHCLAFMFMN 839

Query: 811 WSFV 814
           WSFV
Sbjct: 840 WSFV 843


>gi|15233969|ref|NP_195014.1| homeobox-leucine zipper protein ATHB-8 [Arabidopsis thaliana]
 gi|75220729|sp|Q39123.1|ATHB8_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-8; AltName:
           Full=HD-ZIP protein ATHB-8; AltName: Full=Homeodomain
           transcription factor ATHB-8
 gi|1149569|emb|CAA90703.1| HD-zip [Arabidopsis thaliana]
 gi|7270235|emb|CAB80005.1| HD-zip transcription factor (athb-8) [Arabidopsis thaliana]
 gi|20152536|emb|CAD29660.1| homeodomain-leucine zipper protein 8 [Arabidopsis thaliana]
 gi|20466330|gb|AAM20482.1| HD-zip transcription factor (athb-8) [Arabidopsis thaliana]
 gi|31711762|gb|AAP68237.1| At4g32880 [Arabidopsis thaliana]
 gi|332660738|gb|AEE86138.1| homeobox-leucine zipper protein ATHB-8 [Arabidopsis thaliana]
          Length = 833

 Score = 1307 bits (3382), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/840 (75%), Positives = 723/840 (86%), Gaps = 35/840 (4%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M      + ++DNGKYVRYTPEQVEALERLY++CPKPSS+RRQQLIRECPILSNIEPKQI
Sbjct: 1   MGGGSNNSHNMDNGKYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQI 60

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN YFRQH Q
Sbjct: 61  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSYFRQHPQ 120

Query: 123 ST-TLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWV 181
           +   LAT DTSCESVVTSGQHHLTPQH PRDASPAGLLSIA+ETLTEF+SKATGTAVEWV
Sbjct: 121 NQGNLATTDTSCESVVTSGQHHLTPQHQPRDASPAGLLSIADETLTEFISKATGTAVEWV 180

Query: 182 QMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------- 228
           QMPGMKPGPDS+GIVAISHGC+G+AARACGLVGL+PTRVAEILKD+P             
Sbjct: 181 QMPGMKPGPDSIGIVAISHGCTGIAARACGLVGLDPTRVAEILKDKPCWLRDCRSLDIVN 240

Query: 229 -----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMP 277
                 G  +      LYA TTLAPARDFW+LRYTSV+EDGSLV+CERSL N QNGP+MP
Sbjct: 241 VLSTANGGTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGPSMP 300

Query: 278 PVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTM 337
           P  HFVRAE+LPSGYLIRPCEGGGSI+HIVDH DLEPWSVPEVLR LYESST+LAQ+TTM
Sbjct: 301 PSPHFVRAEILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRTTM 360

Query: 338 AALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
           AALR LRQ++QE++Q +V GWGRRPAALRALSQRLS+GFNEAVNGF+DEGW+++ +DG+D
Sbjct: 361 AALRYLRQISQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFSDEGWSILESDGID 420

Query: 398 DVTVLVNSSPDKLMGL-NLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           DVT+LVNSSP K+M   +L FANG+ ++ +AVLCAKASMLLQNVPP+ILLRFLREHR EW
Sbjct: 421 DVTLLVNSSPTKMMMTSSLPFANGYTSMPSAVLCAKASMLLQNVPPSILLRFLREHRQEW 480

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
           ADN+ID YSAAAIK GPCSLP  R G+FG QVILPLAHTIE+EEFMEVIKLE +GH  ED
Sbjct: 481 ADNSIDAYSAAAIKAGPCSLPIPRPGSFGGQVILPLAHTIENEEFMEVIKLESLGHYQED 540

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSS 576
            +MP D+FLLQ+CSG+DENAV +CAELIFAPIDASF+DDAP++PSGFRIIPLDS  E  S
Sbjct: 541 MMMPADIFLLQMCSGVDENAVESCAELIFAPIDASFSDDAPIIPSGFRIIPLDSKSEGLS 600

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
           PNRTLDLASAL++   G+R   +   +    +SVMTIAF+ AFE HMQE+VA+MARQYVR
Sbjct: 601 PNRTLDLASALDV---GSRTAGDSCGSRGNSKSVMTIAFQLAFEMHMQENVASMARQYVR 657

Query: 637 SIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS 696
           S+I+SVQRVALALSPS+    +GLR P  +PEA TLARWI HSYRCYLGVDLLK    G+
Sbjct: 658 SVIASVQRVALALSPSS-HQLSGLRPPPASPEAHTLARWISHSYRCYLGVDLLK--PHGT 714

Query: 697 ESILKNLWHHTDAVMCCSLKAL-PVFTFANQAGLDMLETTLVALQDITLEKIFD-DHGRK 754
           + +LK+LWHH DAVMCCSLKAL PVFTFANQAGLDMLETTLVALQDITL+KIFD ++G+K
Sbjct: 715 D-LLKSLWHHPDAVMCCSLKALSPVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGKK 773

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            L +EFPQIMQQGF C+ GGIC+SSMGR V+YE+AV WKVLN++E  HCICFMF+NWSF+
Sbjct: 774 TLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNWSFI 833


>gi|110349542|gb|ABG73246.1| class III HD-Zip protein HDZ32 [Pinus taeda]
          Length = 844

 Score = 1306 bits (3379), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/840 (74%), Positives = 713/840 (84%), Gaps = 29/840 (3%)

Query: 4   SCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           S K+GK+ S+D GKYVRYT EQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEPKQIK
Sbjct: 5   SGKEGKSSSMDQGKYVRYTAEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIK 64

Query: 64  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQS 123
           VWFQNRRCREKQRKEASRLQAVNRKL+AMNKLLMEENDRLQKQVSQLVYENGYFRQ  Q+
Sbjct: 65  VWFQNRRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYFRQQLQN 124

Query: 124 TTLATKDTSCESVVTSGQH----HLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 179
            ++AT DTSCESVVTS +H    HLTP+ PPRDASPAGLLSIAEETLTEFLSKA G AVE
Sbjct: 125 ASIATTDTSCESVVTSVKHQQQNHLTPRDPPRDASPAGLLSIAEETLTEFLSKAKGNAVE 184

Query: 180 WVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP----------- 228
           W+QMPGMKPGPD++GIV ISHGC+GVAARAC LVG++PT+VAEILKDR            
Sbjct: 185 WIQMPGMKPGPDAIGIVTISHGCTGVAARACSLVGIDPTKVAEILKDRTSWLRDCRSVDV 244

Query: 229 -------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPT 275
                   G  I      +YA TTLA ARDFW LRYTSVLEDGSLVVCERSL   Q GP+
Sbjct: 245 LTAFSTGNGGTIELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQGGPS 304

Query: 276 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 335
           MP VQ FVRAEM PSGYLIRPCEGGGS+IHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 
Sbjct: 305 MPAVQQFVRAEMQPSGYLIRPCEGGGSLIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKV 364

Query: 336 TMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDG 395
           TM+ALR LRQ+AQEV+   V GWGR+PAALR  SQRL +GFNEAVNGFTD+GW++MGNDG
Sbjct: 365 TMSALRHLRQIAQEVSSDVVLGWGRQPAALRTFSQRLCKGFNEAVNGFTDDGWSLMGNDG 424

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSE 455
           M+DVT+LVNSSP KL G   + ++G PA+   +LCAKASMLLQNVPPA+L+RFLREHRSE
Sbjct: 425 MEDVTILVNSSPSKLFGQQFASSDGLPALGGGILCAKASMLLQNVPPALLVRFLREHRSE 484

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           WAD+NID YSAA+ K  PC++P SRVG FG  QVILPLAHT+EHEEF+EVIKLE  G + 
Sbjct: 485 WADSNIDAYSAASWKASPCTVPSSRVGGFGGGQVILPLAHTVEHEEFLEVIKLENHGLTQ 544

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET 574
           E+A++ RDMFLLQLCSG+DENAVG CAEL+FAPIDAS AD +PLLPSGFR+IPLDSG + 
Sbjct: 545 EEALLSRDMFLLQLCSGLDENAVGACAELVFAPIDASLADSSPLLPSGFRVIPLDSGMDG 604

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
           SSPNRTLDLAS+LEIG AG R + +Y  NS  +RSV+TIAF+F FE+H++E+VA+MARQY
Sbjct: 605 SSPNRTLDLASSLEIGSAGARTSVDYGGNSGNLRSVLTIAFQFTFENHLRENVASMARQY 664

Query: 635 VRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
           VR +++SVQRVA+AL+PS + S  G R P GTPEALTLARW+C SYR +LGV+LL+ +SE
Sbjct: 665 VRGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSE 724

Query: 695 GSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 754
            +ES+LK LWHH+DA+MCCSLK+LPVFTFANQAGLDMLETTLVALQDI+LEKI DD+GRK
Sbjct: 725 VNESLLKTLWHHSDAIMCCSLKSLPVFTFANQAGLDMLETTLVALQDISLEKILDDNGRK 784

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +  ++  QIMQQG+A L  G+C+SSMGRP SY+RA+AWKVLN+EE  HCI FMF+NWSFV
Sbjct: 785 SFCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV 844


>gi|317160484|gb|ADV04324.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 845

 Score = 1305 bits (3376), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/841 (74%), Positives = 714/841 (84%), Gaps = 30/841 (3%)

Query: 4   SCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           S K+GK   +D GKYVRYT EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK
Sbjct: 5   SSKEGKFSGMDQGKYVRYTAEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 64

Query: 64  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQS 123
           VWFQNRRCREKQRKEASRLQAVNRKL+AMNKLLMEENDRLQKQVSQLVYENGYFRQ  Q+
Sbjct: 65  VWFQNRRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYFRQQLQN 124

Query: 124 TTLATKDTSCESVVTSGQH----HLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVE 179
            ++AT DTSCESVVTS +H    HLTP+ PPRDASPAGLLSIAEETLTEFLSKA G AVE
Sbjct: 125 ASIATTDTSCESVVTSVKHQQQNHLTPRDPPRDASPAGLLSIAEETLTEFLSKAKGNAVE 184

Query: 180 WVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP----------- 228
           W+QMPGMKPGPD++GIV ISHGC+GVAARAC LVG++PT+VAEILKDR            
Sbjct: 185 WIQMPGMKPGPDAIGIVTISHGCTGVAARACSLVGIDPTKVAEILKDRTSWLRDCRSVDV 244

Query: 229 -------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPT 275
                   G  +      +YA TTLA ARDFW LRYTSVLEDGSLVVCERSL   Q GP+
Sbjct: 245 LTAFSTGNGGTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQGGPS 304

Query: 276 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 335
           MP VQHFVRAEM PSGYLIRPCEGGGS+IHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 
Sbjct: 305 MPAVQHFVRAEMQPSGYLIRPCEGGGSLIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKV 364

Query: 336 TMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDG 395
           TMAALR LRQ+AQEV+   V GWGR+PAALR  SQRL +GFNEAVNGFTD+GW++MGNDG
Sbjct: 365 TMAALRHLRQIAQEVSSDVVLGWGRQPAALRTFSQRLCKGFNEAVNGFTDDGWSLMGNDG 424

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSE 455
           MDDVT+L+NSSP KL+G   + ++G PA+   +LCAKASMLLQNVPPA+L+RFLREHRSE
Sbjct: 425 MDDVTILINSSPSKLLGQQFASSDGLPALGGGILCAKASMLLQNVPPALLVRFLREHRSE 484

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGS--QVILPLAHTIEHEEFMEVIKLEGVGHS 513
           WAD+NID YSAA+ K  PC++P SR+G FG   QVILPLAHT+EHEEF+EVIKLE  G +
Sbjct: 485 WADSNIDAYSAASWKASPCTVPSSRIGGFGGGGQVILPLAHTVEHEEFLEVIKLENNGLT 544

Query: 514 PEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE 573
            E+A++ RDMFLLQLCSG+DENAVG CAEL+FAPIDAS AD +PLLPSGFR+IPLDSG +
Sbjct: 545 QEEALLSRDMFLLQLCSGIDENAVGACAELVFAPIDASLADSSPLLPSGFRVIPLDSGMD 604

Query: 574 TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQ 633
            SSPNRTLDLASALEIG AG R + +Y  NS+ +RSV+TIAF+F FE+H++E+VATMARQ
Sbjct: 605 GSSPNRTLDLASALEIGSAGTRTSVDYGGNSSNLRSVLTIAFQFTFENHLRENVATMARQ 664

Query: 634 YVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           YVR +++SVQRVA+AL+PS + S  G R P GTPEALTLARW+C SYR +LGV+LL+ +S
Sbjct: 665 YVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNS 724

Query: 694 EGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGR 753
           E +ES+LK LWHH+DA+MCCSLK+LP+FTFANQAGLDMLETTLVALQDI+LEKI DD+GR
Sbjct: 725 EVNESVLKTLWHHSDAIMCCSLKSLPIFTFANQAGLDMLETTLVALQDISLEKILDDNGR 784

Query: 754 KALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
           K+  ++  QIMQQG+A L  G+C+SSMGRP SY+RA+AWKVLN+EE  HCI FMF+NWSF
Sbjct: 785 KSFCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSF 844

Query: 814 V 814
           V
Sbjct: 845 V 845


>gi|297798676|ref|XP_002867222.1| ATHB-8 [Arabidopsis lyrata subsp. lyrata]
 gi|297313058|gb|EFH43481.1| ATHB-8 [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score = 1304 bits (3374), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/831 (76%), Positives = 721/831 (86%), Gaps = 35/831 (4%)

Query: 12  SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRC 71
           ++DNGKYVRYTPEQVEALERLY++CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRC
Sbjct: 9   NIDNGKYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRC 68

Query: 72  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST-TLATKD 130
           REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN YFRQH Q+   LAT D
Sbjct: 69  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSYFRQHPQNQGNLATTD 128

Query: 131 TSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGP 190
            SCESVVTSGQHHLTPQH PRDASPAGLLSIA+ETLTEF+SKATGTAVEWVQMPGMKPGP
Sbjct: 129 NSCESVVTSGQHHLTPQHQPRDASPAGLLSIADETLTEFISKATGTAVEWVQMPGMKPGP 188

Query: 191 DSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSA 232
           DS+GIVAISHGC+G+AARACGLVGL+PTRVAEILKD+P                   G  
Sbjct: 189 DSIGIVAISHGCTGIAARACGLVGLDPTRVAEILKDKPCWLRDCRSLDIVNVLSTANGGT 248

Query: 233 I------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAE 286
           +      LYA TTLAPARDFW+LRYTSV+EDGSLV+CERSL N QNGP+MPP  HFVRAE
Sbjct: 249 LELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGPSMPPSPHFVRAE 308

Query: 287 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQM 346
           +LPSGYLIRPCEGGGSI+HIVDH DLEPWSVPEVLR LYESST+LAQ+TTMAALR LRQ+
Sbjct: 309 ILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRTTMAALRYLRQI 368

Query: 347 AQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSS 406
           +QE++Q +V GWGRRPAALRALSQRLS+GFNEAVNGF+DEGW+++ +DG+DDVT+LVNSS
Sbjct: 369 SQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFSDEGWSILESDGIDDVTLLVNSS 428

Query: 407 PDKLMGL-NLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYS 465
           P K+M   +L FANGF ++ +AVLCAKASMLLQNVPP+ILLRFLREHR EWADN+ID YS
Sbjct: 429 PTKMMMTSSLPFANGFTSMPSAVLCAKASMLLQNVPPSILLRFLREHRQEWADNSIDAYS 488

Query: 466 AAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFL 525
           AAAIK GPCSLP  R G+FG QVILPLAHTIE+EEFMEVIKLE +GH  ED +MP D+FL
Sbjct: 489 AAAIKAGPCSLPIPRPGSFGGQVILPLAHTIENEEFMEVIKLESLGHYQEDMMMPADIFL 548

Query: 526 LQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLAS 585
           LQ+CSG+DENAV +CAELIFAPIDASF+DDAP++PSGFRIIPLDS  E  SPNRTLDLAS
Sbjct: 549 LQMCSGVDENAVESCAELIFAPIDASFSDDAPIIPSGFRIIPLDSKSEGLSPNRTLDLAS 608

Query: 586 ALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRV 645
           AL++   G+R   +   +    +SVMTIAF+ AFE HMQE+VA+MARQYVRS+I+SVQRV
Sbjct: 609 ALDV---GSRTAGDSCGSRGNSKSVMTIAFQLAFEMHMQENVASMARQYVRSVIASVQRV 665

Query: 646 ALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWH 705
           ALALSPS+    +GLR P  +PEA TLARWI HSYRCYLGVDLLK    G++ +LK+LWH
Sbjct: 666 ALALSPSS-HQLSGLRPPPASPEAHTLARWISHSYRCYLGVDLLK--PHGTD-LLKSLWH 721

Query: 706 HTDAVMCCSLKAL-PVFTFANQAGLDMLETTLVALQDITLEKIFD-DHGRKALFAEFPQI 763
           H DAVMCCSLKAL PVFTFANQAGLDMLETTLVALQDITL+KIFD ++G+K L ++FPQI
Sbjct: 722 HPDAVMCCSLKALAPVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGKKNLCSDFPQI 781

Query: 764 MQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           MQQGF C+ GGIC+SSMGR V+YE+AVAWKVLN++E AHC+ FMF+NWSF+
Sbjct: 782 MQQGFMCMDGGICMSSMGRAVTYEKAVAWKVLNDDEDAHCVSFMFLNWSFI 832


>gi|89514863|gb|ABD75306.1| class III homeodomain-leucine zipper protein C3HDZ1 [Ginkgo biloba]
          Length = 842

 Score = 1302 bits (3370), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/842 (74%), Positives = 715/842 (84%), Gaps = 28/842 (3%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MA+  +    G++D  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPK
Sbjct: 1   MAVIAQKDVKGAMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ 
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQ 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHL--TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAV 178
            Q+ ++AT DTSCESVVTSGQH    TPQHPPRDASPAGLLSIAEETL EFLSKATGTAV
Sbjct: 121 LQNASVATTDTSCESVVTSGQHQHNPTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAV 180

Query: 179 EWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP---------- 228
           +WVQMPGMKPGPDS+GIVAISH CSGVAARACGLVGLEPT++AEILKDRP          
Sbjct: 181 DWVQMPGMKPGPDSIGIVAISHSCSGVAARACGLVGLEPTKIAEILKDRPSWLRDCRCLD 240

Query: 229 --------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGP 274
                    G  I       YA TTLA ARDFW LRYT+VLEDGSLVVCERSL   Q GP
Sbjct: 241 VLTPFPTGNGGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLSGAQGGP 300

Query: 275 TMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 334
           ++ P QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK
Sbjct: 301 SIAPAQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 360

Query: 335 TTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
            T+AALR++RQ+AQEVT   V GWGR+PA LR  SQRLSRGFNEAVNGFTD+GW++MGND
Sbjct: 361 MTIAALRRIRQIAQEVTGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGND 420

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
           GM+DVT+ +NSSP KL+G  ++ +NG  AV   +LCAKASMLLQNVPPA+L+RFLREHRS
Sbjct: 421 GMEDVTIAINSSPSKLLGSQVNSSNGLTAVGGGILCAKASMLLQNVPPALLVRFLREHRS 480

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHS 513
           EWAD NID YSAAA+K  P S+PGSR G F GSQVILPLAHT+EHEEF+EVIKLEG G +
Sbjct: 481 EWADCNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLT 540

Query: 514 PEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE 573
            E+A++ RDMFLLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLDS  +
Sbjct: 541 QEEAVLSRDMFLLQLCSGIDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDSRTD 600

Query: 574 -TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMAR 632
            TS PNRTLDLASALE+G AG R + +   NS  +RSV+TIAF+F +E+H++E+VA+MAR
Sbjct: 601 GTSGPNRTLDLASALEVGSAGTRTSGDSGANSFNLRSVLTIAFQFTYENHLRENVASMAR 660

Query: 633 QYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSS 692
           QYVRS+++SVQRVA+AL+PS +SS  G R P GTPEALTLARWIC SYR +LGV+LL++ 
Sbjct: 661 QYVRSVVASVQRVAMALAPSRLSSHVGPRLPPGTPEALTLARWICQSYRFHLGVELLRAD 720

Query: 693 SEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHG 752
            E SES+LK LWHH+DA++CCSLK+LPVFTFANQAGLDMLETTLVALQDI+L+KI D++G
Sbjct: 721 CEASESVLKLLWHHSDAIVCCSLKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENG 780

Query: 753 RKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWS 812
           RK+L ++F QIMQQG+A L  GIC+SSMGRPVSY+RAVAWKVLN+ ++ HC+ FMF+NWS
Sbjct: 781 RKSLCSDFAQIMQQGYAYLPAGICVSSMGRPVSYDRAVAWKVLNDADSTHCMVFMFMNWS 840

Query: 813 FV 814
           F+
Sbjct: 841 FM 842


>gi|90110448|gb|ABD90526.1| class III homeodomain-leucine zipper [Ginkgo biloba]
          Length = 842

 Score = 1302 bits (3369), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/842 (74%), Positives = 714/842 (84%), Gaps = 28/842 (3%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MA+  +    G++D  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPK
Sbjct: 1   MAVIAQKDVKGAMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ 
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQ 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHL--TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAV 178
            Q+ ++AT DTSCESVVTSGQH    TPQHPPRDASPAGLLSIAEETL EFLSKATGTAV
Sbjct: 121 LQNASVATTDTSCESVVTSGQHQHNPTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAV 180

Query: 179 EWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP---------- 228
           +WVQMPGMKPGPDS+GIVAISH CSGVAARACGLVGLEPT++AEILKDRP          
Sbjct: 181 DWVQMPGMKPGPDSIGIVAISHSCSGVAARACGLVGLEPTKIAEILKDRPSWLRDCRCLD 240

Query: 229 --------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGP 274
                    G  I       YA TTLA ARDFW LRYT+VLEDGSLVVCERSL   Q GP
Sbjct: 241 VLTPFPTGNGGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLSGAQGGP 300

Query: 275 TMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 334
           ++ P QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK
Sbjct: 301 SIAPAQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 360

Query: 335 TTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
            T+AALR++RQ+AQEVT   V GWGR+PA LR  SQRLSRGFNEAVNGFTD+GW++MGND
Sbjct: 361 MTIAALRRIRQIAQEVTGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGND 420

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
           GM+DVT+ +NSSP KL+G  ++ +NG  AV   +LCAKASMLLQNVPPA+L+RFLREHRS
Sbjct: 421 GMEDVTIAINSSPSKLLGSQVNSSNGLTAVGGGILCAKASMLLQNVPPALLVRFLREHRS 480

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHS 513
           EWAD NID YSAAA+K  P S+PGSR G F GSQVILPLAHT+EHEEF+EVIKLEG G +
Sbjct: 481 EWADCNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLT 540

Query: 514 PEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE 573
            E+A++ RDMFLLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLDS  +
Sbjct: 541 QEEAVLSRDMFLLQLCSGIDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDSRTD 600

Query: 574 -TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMAR 632
            TS PNRTLDLASALE+G AG R + +   NS  +RSV+TIAF+F +E+H++E+VA+MAR
Sbjct: 601 GTSGPNRTLDLASALEVGSAGTRTSGDSGANSFNLRSVLTIAFQFTYENHLRENVASMAR 660

Query: 633 QYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSS 692
           QYVRS+++SVQRVA+AL+PS +SS  G R P GTPEALTLARWIC SYR  LGV+LL++ 
Sbjct: 661 QYVRSVVASVQRVAMALAPSRLSSHVGPRLPPGTPEALTLARWICQSYRFLLGVELLRAD 720

Query: 693 SEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHG 752
            E SES+LK LWHH+DA++CCSLK+LPVFTFANQAGLDMLETTLVALQDI+L+KI D++G
Sbjct: 721 CEASESVLKLLWHHSDAIVCCSLKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENG 780

Query: 753 RKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWS 812
           RK+L ++F QIMQQG+A L  GIC+SSMGRPVSY+RAVAWKVLN+ ++ HC+ FMF+NWS
Sbjct: 781 RKSLCSDFAQIMQQGYAYLPAGICVSSMGRPVSYDRAVAWKVLNDADSTHCMVFMFMNWS 840

Query: 813 FV 814
           F+
Sbjct: 841 FM 842


>gi|89514867|gb|ABD75308.1| class III homeodomain-leucine zipper protein C3HDZ3 [Ginkgo biloba]
          Length = 837

 Score = 1298 bits (3359), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/829 (74%), Positives = 711/829 (85%), Gaps = 27/829 (3%)

Query: 12  SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRC 71
           ++D+ KYVRYT EQVEALERLY++CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRC
Sbjct: 10  AMDSSKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC 69

Query: 72  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDT 131
           REKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ  Q+ ++AT DT
Sbjct: 70  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYLRQQIQTASIATTDT 129

Query: 132 SCESVVTSG--QHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPG 189
           SCESVVTSG  QHHLTPQHPPRDASPAGLLSIAEETLT+FLSKATGTAV+W+QMPGMKPG
Sbjct: 130 SCESVVTSGPHQHHLTPQHPPRDASPAGLLSIAEETLTQFLSKATGTAVDWIQMPGMKPG 189

Query: 190 PDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGS 231
           PDS+GIVAISH C+GVA+RACGLVGLE ++VAEILKDRP                   G 
Sbjct: 190 PDSIGIVAISHSCTGVASRACGLVGLESSKVAEILKDRPSWLRDCRCLDVLTAFPTGNGG 249

Query: 232 AI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRA 285
            I      +YA TTLA ARD W LRYTSVLEDGSLVVCERSL   Q GP MP VQHFVRA
Sbjct: 250 TIELLYTQMYAPTTLASARDIWTLRYTSVLEDGSLVVCERSLTGTQGGPNMPSVQHFVRA 309

Query: 286 EMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ 345
           EMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV+RPLYESSTVLAQK T++ALR LRQ
Sbjct: 310 EMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVIRPLYESSTVLAQKMTISALRHLRQ 369

Query: 346 MAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNS 405
           +AQEV+   V GWGR+PAALRA SQRL RGFNEAVNGFTD+GW+++GNDGMDDVT+ +NS
Sbjct: 370 VAQEVSGEVVLGWGRQPAALRAFSQRLGRGFNEAVNGFTDDGWSLLGNDGMDDVTIAINS 429

Query: 406 SPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYS 465
           SP KL+   L+ ++G  A+   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD NID YS
Sbjct: 430 SPSKLLASQLAASDGLAALGGGILCAKASMLLQNVPPALLVRFLREHRSEWADCNIDAYS 489

Query: 466 AAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFL 525
           +AA+K  P S+P SR G FGSQVILPLAHT+EHEEF+EVIKLEG G + E+ ++ RDMFL
Sbjct: 490 SAAMKANPYSIPSSRGGVFGSQVILPLAHTMEHEEFLEVIKLEGHGLTHEETVLSRDMFL 549

Query: 526 LQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLAS 585
           LQLCSG+DENAVG CA+L+FAPIDASFADDAPLLPSGFR+IPLDSG + S+PNRTLDLAS
Sbjct: 550 LQLCSGIDENAVGCCAQLVFAPIDASFADDAPLLPSGFRVIPLDSGTDGSTPNRTLDLAS 609

Query: 586 ALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRV 645
           AL++G AG R + +Y + ST MRSV+TIAF+F +E+H++++VA MARQYVRS+++SVQRV
Sbjct: 610 ALDVGSAGTRTSGDYGS-STNMRSVLTIAFQFTYETHLRDNVAAMARQYVRSVVASVQRV 668

Query: 646 ALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWH 705
           A+AL+PS  S+  G R P GTPEALTLA WIC SYR +LG++LL+   E SES+LK LWH
Sbjct: 669 AMALAPSRQSTLLGPRPPPGTPEALTLAGWICQSYRFHLGLELLRGDCEASESVLKLLWH 728

Query: 706 HTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQ 765
           H+DA+MCCS K LPVFTFANQAGLDMLETTLVALQDI+LEKI D++GRK+L ++F QIMQ
Sbjct: 729 HSDAIMCCSWKTLPVFTFANQAGLDMLETTLVALQDISLEKILDENGRKSLCSDFSQIMQ 788

Query: 766 QGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           QG+A L  GIC+SSMGRPVSY+RA+AWKVLN+EE+ HCI FMF+NWSFV
Sbjct: 789 QGYAYLPAGICVSSMGRPVSYDRAIAWKVLNDEESTHCIAFMFMNWSFV 837


>gi|24417147|dbj|BAC22512.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 836

 Score = 1292 bits (3343), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/836 (74%), Positives = 707/836 (84%), Gaps = 31/836 (3%)

Query: 4   SCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           SCK G +  +DNGKYVRYTPEQVEALERLYH+CPKPSS RRQQLIRECPILSNIEPKQIK
Sbjct: 7   SCK-GDSMGMDNGKYVRYTPEQVEALERLYHDCPKPSSHRRQQLIRECPILSNIEPKQIK 65

Query: 64  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQS 123
           VWFQNRRCREKQRKEASRLQAVNRKL+AMNKLLMEENDRLQKQVS LVYEN +FRQ TQ+
Sbjct: 66  VWFQNRRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSNLVYENSHFRQQTQN 125

Query: 124 TTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 183
             L T DTSCESVVTSGQHH +PQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM
Sbjct: 126 MALVTTDTSCESVVTSGQHHSSPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 185

Query: 184 PGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------RGSAIL--- 234
           PGMKPGPDS+GI+AISHGC+GVA+RACGLVGLEPTRVAEILKDRP      R   +L   
Sbjct: 186 PGMKPGPDSIGIIAISHGCTGVASRACGLVGLEPTRVAEILKDRPSWYRDCRAVDVLNVL 245

Query: 235 ---------------YALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPV 279
                          YA TTLAPARDFWLLRYTS LEDGSLVVCERSL N QNGPTMPPV
Sbjct: 246 TTGTNRTIELLYMQLYAPTTLAPARDFWLLRYTSALEDGSLVVCERSLNNTQNGPTMPPV 305

Query: 280 QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAA 339
            HFVRA++LPSGYLIRPC+GGGSIIHIVDH+D E  SVPEVLRPLYESST+LAQ+TT+AA
Sbjct: 306 PHFVRAKILPSGYLIRPCDGGGSIIHIVDHVDFEAGSVPEVLRPLYESSTLLAQRTTLAA 365

Query: 340 LRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
            RQLRQ++QE++Q +V  WGRRPAALRAL+QR+SRGFNEA+NG  DEGWT+M  DG+DDV
Sbjct: 366 FRQLRQISQEISQPAVTSWGRRPAALRALAQRMSRGFNEAINGLNDEGWTMMEGDGVDDV 425

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADN 459
           TVLVNSSPDK+MG    FA+GFP++S+AVLCAKASMLLQNVPPAIL RFLREHRSEWAD+
Sbjct: 426 TVLVNSSPDKVMGATPMFADGFPSISHAVLCAKASMLLQNVPPAILTRFLREHRSEWADS 485

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVG-HSPEDAI 518
           +ID Y+A ++K G C +P +R G FG QVILPLAHTIEHEEFMEVIKLE +  +  ED +
Sbjct: 486 SIDCYAATSVKGGACGIPLARSGGFGGQVILPLAHTIEHEEFMEVIKLENMSPYRAEDML 545

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPN 578
           +P D+F LQLC+G+DENA+GT AELIFAPIDASF DDAPLLPSGFRIIPL++    +S N
Sbjct: 546 IPGDIFFLQLCNGVDENAIGTSAELIFAPIDASFTDDAPLLPSGFRIIPLNN----NSQN 601

Query: 579 RTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSI 638
            T DLAS LE+GP G R+  +Y   S   +SVMTIAF+FAFE H+QE +A MARQYVRSI
Sbjct: 602 PTRDLASTLEVGPPGKRSPADYLGQSGSTKSVMTIAFQFAFEIHLQESIAAMARQYVRSI 661

Query: 639 ISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSES 698
           I+SVQRVALALSPS+   ++ L++  GTPEA  LARWIC S+RC+LG DL K   E S++
Sbjct: 662 IASVQRVALALSPSSFGPRS-LQSASGTPEAQMLARWICQSFRCFLGEDLFKMVDERSDT 720

Query: 699 ILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFA 758
           +LK LWHH+DA+MCCSLKALP FTFANQAGLDMLETTLV+LQDITL+KIFD  GR ++ +
Sbjct: 721 MLKTLWHHSDAIMCCSLKALPDFTFANQAGLDMLETTLVSLQDITLDKIFDRGGRTSICS 780

Query: 759 EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           E PQI+QQGFAC   G+CL+SMGRPVSYERAVAWKVLN+EE  HCI F+F+NWSFV
Sbjct: 781 ELPQILQQGFACFPSGVCLTSMGRPVSYERAVAWKVLNDEENPHCIAFVFVNWSFV 836


>gi|82908746|gb|ABB93543.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908758|gb|ABB93549.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908766|gb|ABB93553.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908776|gb|ABB93558.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908792|gb|ABB93566.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908814|gb|ABB93577.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908824|gb|ABB93582.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908842|gb|ABB93591.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
          Length = 842

 Score = 1277 bits (3304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/837 (73%), Positives = 705/837 (84%), Gaps = 30/837 (3%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           KD K  S+D  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 8   KDAKN-SMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 66

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ  Q+ +
Sbjct: 67  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNAS 126

Query: 126 LATKDTSCESVVTSGQHHL--TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 183
           +A  DTSCESVVTSGQH    TPQHPPRDASPAGLLSIAEETL EFLSKA G AV+WVQM
Sbjct: 127 VAATDTSCESVVTSGQHQHNPTPQHPPRDASPAGLLSIAEETLAEFLSKAKGAAVDWVQM 186

Query: 184 PGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP--------------- 228
           PGMKPGPDS+GIVAIS+ C+GVAARACGLVGL+PT+VAEILKDRP               
Sbjct: 187 PGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTAF 246

Query: 229 ---RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPV 279
               G  I       YA TTLA ARDFW LRYT+VLEDGSLVVCERSL   Q GP++PPV
Sbjct: 247 PTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPV 306

Query: 280 QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAA 339
           QHFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRPLYESSTVLAQK T+AA
Sbjct: 307 QHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAA 366

Query: 340 LRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
           LR+LRQ+AQE T   V GWGR+PA LR  SQRLSRGFNEAVNGFTD+GW+++G+DG++DV
Sbjct: 367 LRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDGVEDV 426

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADN 459
           T+ +NSSP+K     ++ +NG   +   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD+
Sbjct: 427 TIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADS 486

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
           NID YSAAA+K  P S+PGSR G F GSQVILPLAHT+EHEEF+EVIKLEG G + E+A+
Sbjct: 487 NIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAV 546

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS-SP 577
           + RDMFLLQLCSG+DENA G CAEL+FAPID SFADDAPLLPSGFR+IPL+S  + S  P
Sbjct: 547 LSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGGP 606

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
           NRTLDLASALE+G AG R + +  TNS  +RSV+TIAF+F +ESH++E+VA MARQYVRS
Sbjct: 607 NRTLDLASALEVGSAGTRTSGDSGTNSN-LRSVLTIAFQFTYESHLRENVAAMARQYVRS 665

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
           +++SVQRVA+AL+PS +S+  G R P GTPEALTLARWIC SYR ++GVDL ++  E SE
Sbjct: 666 VVASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASE 725

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
           S+LK LWHH+DA+MCCS+K+LPVFTFANQAGLDMLETTLVALQDI+L+KI D++GRK+ F
Sbjct: 726 SVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFF 785

Query: 758 AEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            ++ QI+QQG+A L  GICLSSMGRP SY+RA+AWKVLN+E++ HCI FMF+NWSF+
Sbjct: 786 TDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM 842


>gi|82908650|gb|ABB93495.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908654|gb|ABB93497.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908656|gb|ABB93498.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908658|gb|ABB93499.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908660|gb|ABB93500.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908662|gb|ABB93501.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908664|gb|ABB93502.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908666|gb|ABB93503.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908668|gb|ABB93504.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908670|gb|ABB93505.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908672|gb|ABB93506.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908674|gb|ABB93507.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908676|gb|ABB93508.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908678|gb|ABB93509.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908680|gb|ABB93510.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908682|gb|ABB93511.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908684|gb|ABB93512.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908686|gb|ABB93513.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908688|gb|ABB93514.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908690|gb|ABB93515.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908692|gb|ABB93516.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908694|gb|ABB93517.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908696|gb|ABB93518.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908698|gb|ABB93519.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908700|gb|ABB93520.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908702|gb|ABB93521.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908704|gb|ABB93522.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908706|gb|ABB93523.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908708|gb|ABB93524.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908710|gb|ABB93525.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908712|gb|ABB93526.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908714|gb|ABB93527.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908716|gb|ABB93528.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908718|gb|ABB93529.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908720|gb|ABB93530.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908722|gb|ABB93531.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908724|gb|ABB93532.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908726|gb|ABB93533.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908728|gb|ABB93534.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908730|gb|ABB93535.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908732|gb|ABB93536.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908734|gb|ABB93537.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908736|gb|ABB93538.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908738|gb|ABB93539.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908740|gb|ABB93540.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908742|gb|ABB93541.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908744|gb|ABB93542.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908748|gb|ABB93544.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908750|gb|ABB93545.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908752|gb|ABB93546.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908754|gb|ABB93547.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908756|gb|ABB93548.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908760|gb|ABB93550.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908762|gb|ABB93551.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908764|gb|ABB93552.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908768|gb|ABB93554.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908770|gb|ABB93555.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908772|gb|ABB93556.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908774|gb|ABB93557.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908778|gb|ABB93559.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908780|gb|ABB93560.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908782|gb|ABB93561.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908784|gb|ABB93562.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908786|gb|ABB93563.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908788|gb|ABB93564.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908790|gb|ABB93565.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908794|gb|ABB93567.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908796|gb|ABB93568.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908798|gb|ABB93569.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908800|gb|ABB93570.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908802|gb|ABB93571.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908804|gb|ABB93572.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908806|gb|ABB93573.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908808|gb|ABB93574.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908810|gb|ABB93575.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908812|gb|ABB93576.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908816|gb|ABB93578.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908818|gb|ABB93579.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908820|gb|ABB93580.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908822|gb|ABB93581.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908826|gb|ABB93583.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908828|gb|ABB93584.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908830|gb|ABB93585.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908832|gb|ABB93586.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908834|gb|ABB93587.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908836|gb|ABB93588.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908838|gb|ABB93589.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908840|gb|ABB93590.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908844|gb|ABB93592.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82909691|gb|ABB94009.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909693|gb|ABB94010.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909695|gb|ABB94011.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909697|gb|ABB94012.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909699|gb|ABB94013.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909701|gb|ABB94014.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909703|gb|ABB94015.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909705|gb|ABB94016.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909707|gb|ABB94017.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909709|gb|ABB94018.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909711|gb|ABB94019.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909713|gb|ABB94020.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909715|gb|ABB94021.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909717|gb|ABB94022.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909719|gb|ABB94023.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909721|gb|ABB94024.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909723|gb|ABB94025.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909725|gb|ABB94026.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909727|gb|ABB94027.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909729|gb|ABB94028.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909731|gb|ABB94029.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909733|gb|ABB94030.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909737|gb|ABB94032.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909739|gb|ABB94033.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909741|gb|ABB94034.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909743|gb|ABB94035.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909745|gb|ABB94036.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909747|gb|ABB94037.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909749|gb|ABB94038.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909751|gb|ABB94039.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909753|gb|ABB94040.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909755|gb|ABB94041.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909757|gb|ABB94042.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909759|gb|ABB94043.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909761|gb|ABB94044.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909763|gb|ABB94045.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909765|gb|ABB94046.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909767|gb|ABB94047.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909769|gb|ABB94048.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909771|gb|ABB94049.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909773|gb|ABB94050.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909775|gb|ABB94051.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909777|gb|ABB94052.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909779|gb|ABB94053.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909781|gb|ABB94054.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909783|gb|ABB94055.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909785|gb|ABB94056.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909787|gb|ABB94057.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909789|gb|ABB94058.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909791|gb|ABB94059.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909793|gb|ABB94060.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909795|gb|ABB94061.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909797|gb|ABB94062.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909799|gb|ABB94063.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909801|gb|ABB94064.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909803|gb|ABB94065.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909805|gb|ABB94066.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909807|gb|ABB94067.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909809|gb|ABB94068.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909811|gb|ABB94069.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909813|gb|ABB94070.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909815|gb|ABB94071.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909817|gb|ABB94072.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909819|gb|ABB94073.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909821|gb|ABB94074.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909823|gb|ABB94075.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909825|gb|ABB94076.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909827|gb|ABB94077.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909829|gb|ABB94078.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909831|gb|ABB94079.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909833|gb|ABB94080.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909835|gb|ABB94081.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909837|gb|ABB94082.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909839|gb|ABB94083.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909841|gb|ABB94084.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909843|gb|ABB94085.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909845|gb|ABB94086.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909847|gb|ABB94087.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909849|gb|ABB94088.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909851|gb|ABB94089.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909853|gb|ABB94090.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909855|gb|ABB94091.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909857|gb|ABB94092.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909859|gb|ABB94093.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909861|gb|ABB94094.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909863|gb|ABB94095.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909865|gb|ABB94096.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909867|gb|ABB94097.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909869|gb|ABB94098.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909873|gb|ABB94100.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909875|gb|ABB94101.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909877|gb|ABB94102.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909879|gb|ABB94103.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909881|gb|ABB94104.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909883|gb|ABB94105.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909885|gb|ABB94106.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909887|gb|ABB94107.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909889|gb|ABB94108.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909891|gb|ABB94109.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909893|gb|ABB94110.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909895|gb|ABB94111.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909897|gb|ABB94112.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909899|gb|ABB94113.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909901|gb|ABB94114.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909903|gb|ABB94115.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909905|gb|ABB94116.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909907|gb|ABB94117.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909909|gb|ABB94118.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909911|gb|ABB94119.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909913|gb|ABB94120.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909915|gb|ABB94121.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909917|gb|ABB94122.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909919|gb|ABB94123.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909921|gb|ABB94124.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909923|gb|ABB94125.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909925|gb|ABB94126.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909927|gb|ABB94127.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909929|gb|ABB94128.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score = 1276 bits (3301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/837 (72%), Positives = 704/837 (84%), Gaps = 30/837 (3%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           KD K  S+D  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 8   KDAKN-SMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 66

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ  Q+ +
Sbjct: 67  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNAS 126

Query: 126 LATKDTSCESVVTSGQHHL--TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 183
           +A  DTSCESVVTSGQH    TPQHPPRDASPAGLLSIAEETL EFLSKA G AV+WVQM
Sbjct: 127 VAATDTSCESVVTSGQHQHNPTPQHPPRDASPAGLLSIAEETLAEFLSKAKGAAVDWVQM 186

Query: 184 PGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP--------------- 228
           PGMKPGPDS+GIVAIS+ C+GVAARACGLVGL+PT+VAEILKDRP               
Sbjct: 187 PGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTAF 246

Query: 229 ---RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPV 279
               G  I       YA TTLA ARDFW LRYT+VLEDGSLVVCERSL   Q GP++PPV
Sbjct: 247 PTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPV 306

Query: 280 QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAA 339
           QHFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRPLYESSTVLAQK T+AA
Sbjct: 307 QHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAA 366

Query: 340 LRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
           LR+LRQ+AQE T   V GWGR+PA LR  SQRLSRGFNEAVNGFTD+GW+++G+DG++DV
Sbjct: 367 LRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDGVEDV 426

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADN 459
           T+ +NSSP+K     ++ +NG   +   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD+
Sbjct: 427 TIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADS 486

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
           NID YSAAA+K  P S+PGSR G F GSQVILPLAHT+EHEEF+EVIKLEG G + E+A+
Sbjct: 487 NIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAV 546

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS-SP 577
           + RDMFLLQLCSG+DENA G CAEL+FAPID SFADDAPLLPSGFR+IPL+S  + S  P
Sbjct: 547 LSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGGP 606

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
           NRTLDLASALE+G AG R + +   NS  +RSV+TIAF+F +ESH++E+VA MARQYVRS
Sbjct: 607 NRTLDLASALEVGSAGTRTSGDSGANSN-LRSVLTIAFQFTYESHLRENVAAMARQYVRS 665

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
           +++SVQRVA+AL+PS +S+  G R P GTPEALTLARWIC SYR ++GVDL ++  E SE
Sbjct: 666 VVASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASE 725

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
           S+LK LWHH+DA+MCCS+K+LPVFTFANQAGLDMLETTLVALQDI+L+KI D++GRK+ F
Sbjct: 726 SVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFF 785

Query: 758 AEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            ++ QI+QQG+A L  GICLSSMGRP SY+RA+AWKVLN+E++ HCI FMF+NWSF+
Sbjct: 786 TDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM 842


>gi|89514873|gb|ABD75311.1| class III homeodomain-leucine zipper protein C3HDZ1 [Taxus globosa]
          Length = 837

 Score = 1275 bits (3300), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/839 (73%), Positives = 709/839 (84%), Gaps = 29/839 (3%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M  K+GK  S+D  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQI
Sbjct: 1   MMNKEGKN-SMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQI 59

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ  Q
Sbjct: 60  KVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQ 119

Query: 123 STTLATKDTSCESVVTSGQHHL--TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           + ++AT DTSCESVVTSGQH    TPQHP RDASPAGLLSIAEETL EFL KATGTAV+W
Sbjct: 120 NASVATTDTSCESVVTSGQHQHNPTPQHPLRDASPAGLLSIAEETLAEFLLKATGTAVDW 179

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQMPGMKPGPDS+GIVAISH C+GVAARACGLVGLEPT+VAEILKDRP            
Sbjct: 180 VQMPGMKPGPDSIGIVAISHSCTGVAARACGLVGLEPTKVAEILKDRPSWLRDCRCLDVL 239

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I       YA TTLA ARDFW LRYT+VLEDGSLVVCERSL + Q GP+M
Sbjct: 240 TAFPTGNGGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLNSTQGGPSM 299

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           PPV HFVRAEMLPSGYLIRPCEGGGSII IVDHMDLEPWSVPEVLRPLYESST+LAQK T
Sbjct: 300 PPVPHFVRAEMLPSGYLIRPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTILAQKMT 359

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           +AALR+LRQ+AQEVT   V GWGR+PA LR  SQRLSRGFNEAVNGFTD+GW+ MG+DG+
Sbjct: 360 IAALRRLRQIAQEVTGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSSMGSDGV 419

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           +DVT+++NSSP KL+G  ++ +NG   +   +LCAKASMLLQNVPPA+L+RFLREHRSEW
Sbjct: 420 EDVTIVINSSPSKLVGSQVNSSNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEW 479

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           AD ++D YSAAA+K  P  LPGSR G F GSQVILPLAHT+EHEEF+EVIKLEG G + E
Sbjct: 480 ADCSMDAYSAAALKASPYCLPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQE 539

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS 575
           +A++ RDMFLLQLCSG+DE+A G CA+L+FAPID SFADDAPLLPSGFR+IPL+S   ++
Sbjct: 540 EAVLSRDMFLLQLCSGIDESAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLESRTVSA 599

Query: 576 SPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYV 635
             NRTLDLASALE+G  G+RA+ +   NS  +RSV+TIAF+F +E+H++E+VA MARQYV
Sbjct: 600 GANRTLDLASALEVGSTGSRASGDSGANSN-LRSVLTIAFQFTYENHLRENVAAMARQYV 658

Query: 636 RSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEG 695
           RS+++SVQRVA+AL+PS ++   G R P GTPEALTLARWICHSYR +LGVDLL +  E 
Sbjct: 659 RSVVASVQRVAMALAPSRLNPHIGPRPPPGTPEALTLARWICHSYRLHLGVDLLPADCEA 718

Query: 696 SESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKA 755
           S+++LK LWHH+DA+MCCSLK+LPVFTFANQAGLDMLETTLVALQDI+L+KI D++GRK+
Sbjct: 719 SDALLKMLWHHSDAIMCCSLKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKS 778

Query: 756 LFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           L  +F QIMQQG+A L  GIC+SSMGRPVSY+RA+AWKVLN+EE+ HC+ FMF++WSF+
Sbjct: 779 LCTDFAQIMQQGYAYLPAGICVSSMGRPVSYDRAIAWKVLNDEESTHCVVFMFMSWSFM 837


>gi|110349540|gb|ABG73245.1| class III HD-Zip protein HDZ31 [Pinus taeda]
          Length = 842

 Score = 1275 bits (3300), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/837 (72%), Positives = 705/837 (84%), Gaps = 30/837 (3%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           KD K  S+D  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 8   KDAKN-SMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 66

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ  Q+ +
Sbjct: 67  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNAS 126

Query: 126 LATKDTSCESVVTSGQHHL--TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 183
           +A  DTSCESVVTSGQH    TPQHPPRDASPAGLLSIAEETLTEFLSKA G AV+WVQM
Sbjct: 127 VAATDTSCESVVTSGQHQHNPTPQHPPRDASPAGLLSIAEETLTEFLSKAKGAAVDWVQM 186

Query: 184 PGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP--------------- 228
           PGMKPGPDS+GIVAIS+ C+GVAARACGLVGL+PT+VAEILKDRP               
Sbjct: 187 PGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTAF 246

Query: 229 ---RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPV 279
               G  I       YA TTLA ARDFW LRYT+VLEDGSLVVCERSL   Q GP++PPV
Sbjct: 247 PTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPV 306

Query: 280 QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAA 339
           QHFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRPLYESSTVLAQK T+AA
Sbjct: 307 QHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAA 366

Query: 340 LRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
           LR+LRQ+AQE T   V GWGR+PA LR  SQRLSRGFNEAVNGFTD+GW++MG+DG++DV
Sbjct: 367 LRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGSDGVEDV 426

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADN 459
           T+ +NSSP+K     ++ +NG   +   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD+
Sbjct: 427 TIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADS 486

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
           NID YSAAA+K  P S+PGSR G F GSQVILPLAHT+EHEEF+EVIKLEG G + E+A+
Sbjct: 487 NIDAYSAAALKSSPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAV 546

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS-SP 577
           + RDMFLLQLCSG+DENA G CAEL+FAPID SFADDAPLLPSGFR+IPL+S  + S  P
Sbjct: 547 LSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGGP 606

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
           NRTLDLASALE+G  G R + +  T+S  +RSV+TIAF+F +ESH++E+VA MARQYVRS
Sbjct: 607 NRTLDLASALEVGSTGTRTSGDSGTSSN-LRSVLTIAFQFTYESHLRENVAAMARQYVRS 665

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
           +++SVQRVA+A++PS ++S  G R P GTPEALTLARWIC SYR ++GVDL ++  E SE
Sbjct: 666 VVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASE 725

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
           S+LK LWHH+DA+MCCS+K+LPVFTFANQAGLDMLETTLVALQDI+L+KI D++GRK+ F
Sbjct: 726 SVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFF 785

Query: 758 AEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            ++ QI+QQG+A L  GICLSSMGRP SY+RA+AWKVLN+E++ HCI FMF+NWSF+
Sbjct: 786 TDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM 842


>gi|82908652|gb|ABB93496.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
          Length = 842

 Score = 1275 bits (3299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/837 (72%), Positives = 704/837 (84%), Gaps = 30/837 (3%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           KD K  S+D  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 8   KDAKN-SMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 66

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ  Q+ +
Sbjct: 67  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNAS 126

Query: 126 LATKDTSCESVVTSGQHHL--TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 183
           +A  DTSCESVVTSGQH    TPQHPPRDASPAGLLSIAEETL EFLSKA G AV+WVQM
Sbjct: 127 VAATDTSCESVVTSGQHQHNPTPQHPPRDASPAGLLSIAEETLAEFLSKAKGAAVDWVQM 186

Query: 184 PGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP--------------- 228
           PGMKPGPDS+GIVAIS+ C+GVAARACGLVGL+PT+VAE+LKDRP               
Sbjct: 187 PGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEVLKDRPSWLRDCRCLDVLTAF 246

Query: 229 ---RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPV 279
               G  I       YA TTLA ARDFW LRYT+VLEDGSLVVCERSL   Q GP++PPV
Sbjct: 247 PTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPV 306

Query: 280 QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAA 339
           QHFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRPLYESSTVLAQK T+AA
Sbjct: 307 QHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAA 366

Query: 340 LRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
           LR+LRQ+AQE T   V GWGR+PA LR  SQRLSRGFNEAVNGFTD+GW+++G+DG++DV
Sbjct: 367 LRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDGVEDV 426

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADN 459
           T+ +NSSP+K     ++ +NG   +   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD+
Sbjct: 427 TIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADS 486

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
           NID YSAAA+K  P S+PGSR G F GSQVILPLAHT+EHEEF+EVIKLEG G + E+A+
Sbjct: 487 NIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAV 546

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS-SP 577
           + RDMFLLQLCSG+DENA G CAEL+FAPID SFADDAPLLPSGFR+IPL+S  + S  P
Sbjct: 547 LSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGGP 606

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
           NRTLDLASALE+G AG R + +   NS  +RSV+TIAF+F +ESH++E+VA MARQYVRS
Sbjct: 607 NRTLDLASALEVGSAGTRTSGDSGANSN-LRSVLTIAFQFTYESHLRENVAAMARQYVRS 665

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
           +++SVQRVA+AL+PS +S+  G R P GTPEALTLARWIC SYR ++GVDL ++  E SE
Sbjct: 666 VVASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASE 725

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
           S+LK LWHH+DA+MCCS+K+LPVFTFANQAGLDMLETTLVALQDI+L+KI D++GRK+ F
Sbjct: 726 SVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFF 785

Query: 758 AEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            ++ QI+QQG+A L  GICLSSMGRP SY+RA+AWKVLN+E++ HCI FMF+NWSF+
Sbjct: 786 TDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM 842


>gi|317160480|gb|ADV04322.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 842

 Score = 1275 bits (3299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/837 (72%), Positives = 704/837 (84%), Gaps = 30/837 (3%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           KD K  S+D  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 8   KDAKN-SMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 66

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ  Q+ +
Sbjct: 67  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNAS 126

Query: 126 LATKDTSCESVVTSGQHHL--TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 183
           +A  DTSCESVVTSGQH    TPQHPPRDASPAGLLSIAEETL EFLSKA G AV+WVQM
Sbjct: 127 VAATDTSCESVVTSGQHQHNPTPQHPPRDASPAGLLSIAEETLAEFLSKAKGAAVDWVQM 186

Query: 184 PGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP--------------- 228
           PGMKPGPDS+GIVAIS+ C+GVAARACGLVGL+PT+VAEILKDRP               
Sbjct: 187 PGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTAF 246

Query: 229 ---RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPV 279
               G  I       YA TTLA ARDFW LRYT+VLEDGSLVVCERSL   Q GP++PPV
Sbjct: 247 PTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPV 306

Query: 280 QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAA 339
           QHFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRPLYESSTVLAQK T+AA
Sbjct: 307 QHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAA 366

Query: 340 LRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
           LR+LRQ+AQE T   V GWGR+PA LR  SQRLSRGFNEAVNGFTD+GW+++G+DG++DV
Sbjct: 367 LRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDGVEDV 426

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADN 459
           T+ +NSSP+K     ++ +NG   +   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD+
Sbjct: 427 TIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADS 486

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
           NID YSAAA+K  P S+PGSR G F GSQVILPLAHT+EHEEF+EVIKLEG G + E+A+
Sbjct: 487 NIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAV 546

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS-SP 577
           + RDMFLLQLCSG+DENA G CAEL+FAPID SFADDAPLLPSGFR+IPL+S  + S  P
Sbjct: 547 LSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGGP 606

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
           NRTLDLASALE+G AG R + +   NS  +RSV+TIAF+F +ESH++E+VA MARQYVRS
Sbjct: 607 NRTLDLASALEVGSAGARTSGDSGANSN-LRSVLTIAFQFTYESHLRENVAAMARQYVRS 665

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
           +++SVQRVA+AL+PS +S+  G R P GTPEALTLARWIC SYR ++GVDL ++  E SE
Sbjct: 666 VVASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASE 725

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
           S+LK LWHH+DA+MCCS+K+LPVFTFANQAGLDMLETTLVALQDI+L+KI D++GRK+ F
Sbjct: 726 SVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFF 785

Query: 758 AEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            ++ QI+QQG+A L  GICLSSMGRP SY+RA+AWKVLN+E++ HCI FMF+NWSF+
Sbjct: 786 TDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM 842


>gi|89514869|gb|ABD75309.1| class III homeodomain-leucine zipper protein C3HDZ1 [Pseudotsuga
           menziesii]
          Length = 842

 Score = 1274 bits (3297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/837 (72%), Positives = 705/837 (84%), Gaps = 30/837 (3%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           KD K  S+D  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECP+LSNIEPKQIKVW
Sbjct: 8   KDAKN-SMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPMLSNIEPKQIKVW 66

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ  Q+ +
Sbjct: 67  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNAS 126

Query: 126 LATKDTSCESVVTSGQHHL--TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 183
           +A  DTSCESVV+SGQH    TPQHPPRDASPAGLLSIAEETL EFLSKA G AV+WVQM
Sbjct: 127 VAATDTSCESVVSSGQHQHNPTPQHPPRDASPAGLLSIAEETLAEFLSKAKGAAVDWVQM 186

Query: 184 PGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP--------------- 228
           PGMKPGPDS+GIVAIS+ C+GVAARACGLVGL+PT+VAEILK+RP               
Sbjct: 187 PGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKERPSWLRDCRCLDVLTAF 246

Query: 229 ---RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPV 279
               G  I       YA TTLA ARDFW LRYT+VLEDGSLVVCERSL   Q GP++PPV
Sbjct: 247 PTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPV 306

Query: 280 QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAA 339
           QHFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRPLYESSTVLAQK T+AA
Sbjct: 307 QHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAA 366

Query: 340 LRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
           LR+LRQ+AQE T   V GWGR+PA LR  SQRLSRGFNEAVNGFTD+GW++MG+DG++DV
Sbjct: 367 LRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGSDGVEDV 426

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADN 459
           T+ +NSSP+K  G  ++ +NG   +   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD+
Sbjct: 427 TIAINSSPNKHFGSQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADS 486

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
           NID YSAAA+K  P S+PGSR G F GSQVILPLAHT+EHEEF+EVIKLEG G + E+A+
Sbjct: 487 NIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAV 546

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS-SP 577
           + RDMFLLQLCSG+DENA G CAEL+FAPID SFADDAPLLPSGFRIIPL+S  + S  P
Sbjct: 547 LSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRIIPLESRTDGSGGP 606

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
           NRTLDLASALE+G AG R + +   NS  +RSV+TIAF+F +ESH++E+VA MARQYVR+
Sbjct: 607 NRTLDLASALEVGSAGTRTSGDSGANSN-LRSVLTIAFQFTYESHLRENVAAMARQYVRT 665

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
           +++SVQRVA+AL+PS +SS  G R P GTPEALTLARWIC SYR ++GVDL ++  + SE
Sbjct: 666 VVASVQRVAMALAPSRLSSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCDASE 725

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
           S+LK LWHH+DA+MCCS+K+LPVFTFANQAGLDMLETTLVALQDI+L+KI D++GRK+ F
Sbjct: 726 SVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFF 785

Query: 758 AEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            ++ QI+QQG+A L  GICLSSMGRP SY+RA+AWKVLN+E++ HCI FMF+NWSF+
Sbjct: 786 TDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFVNWSFM 842


>gi|82909735|gb|ABB94031.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score = 1274 bits (3296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/837 (72%), Positives = 704/837 (84%), Gaps = 30/837 (3%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           KD K  S+D  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 8   KDAKN-SMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 66

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ  Q+ +
Sbjct: 67  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNAS 126

Query: 126 LATKDTSCESVVTSGQHHL--TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 183
           +A  DTSCESVVTSGQH    TPQHPPRDASPAGLLSIAEETL EFLSKA G AV+WVQM
Sbjct: 127 VAATDTSCESVVTSGQHQHNPTPQHPPRDASPAGLLSIAEETLAEFLSKAKGAAVDWVQM 186

Query: 184 PGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP--------------- 228
           PGMKPGPDS+GIVAIS+ C+GVAARACGLVGL+PT+VAEILKDRP               
Sbjct: 187 PGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTAF 246

Query: 229 ---RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPV 279
               G  I       YA TTLA ARDFW LRYT+VLEDGSLVVCERSL   Q GP++PPV
Sbjct: 247 PTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPV 306

Query: 280 QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAA 339
           QHFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRPLYESSTVLAQK T+AA
Sbjct: 307 QHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAA 366

Query: 340 LRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
           LR+LRQ+AQE T   V GWGR+PA LR  SQRLSRGFNEAVNGFTD+GW+++G+DG++DV
Sbjct: 367 LRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDGVEDV 426

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADN 459
           T+ +NSSP+K     ++ +NG   +   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD+
Sbjct: 427 TIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADS 486

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
           NID YSAAA+K  P S+PGSR G F GSQVILPLAHT+EHEEF+EVIKLEG G + E+A+
Sbjct: 487 NIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAV 546

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS-SP 577
           + RDMFLLQLCSG+DENA G CAEL+FAPID SFADDAPLLPSGFR+IPL+S  + S  P
Sbjct: 547 LSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGGP 606

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
           NRTLDLASALE+G AG R + +   NS  +RSV+TIAF+F +ESH++E+VA MARQYVRS
Sbjct: 607 NRTLDLASALEVGSAGTRTSGDSGANSN-LRSVLTIAFQFTYESHLRENVAAMARQYVRS 665

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
           +++SVQRVA+AL+PS +S+  G R P GTPEALTLARWIC SYR ++GVDL ++  E SE
Sbjct: 666 VVASVQRVAMALAPSRLSAHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASE 725

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
           S+LK LWHH+DA+MCCS+K+LPVFTFANQAGLDMLETTLVALQDI+L+KI D++GRK+ F
Sbjct: 726 SVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFF 785

Query: 758 AEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            ++ QI+QQG+A L  GICLSSMGRP SY+RA+AWKVLN++++ HCI FMF+NWSF+
Sbjct: 786 TDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDKDSTHCIVFMFMNWSFM 842


>gi|82909871|gb|ABB94099.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score = 1273 bits (3295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/837 (72%), Positives = 703/837 (83%), Gaps = 30/837 (3%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           KD K  S+D  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 8   KDAKN-SMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 66

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ  Q+ +
Sbjct: 67  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNAS 126

Query: 126 LATKDTSCESVVTSGQHHL--TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 183
           +A  DTSCESVVTSGQH    TPQHPPRDASPAGLLSIAEETL EFLSKA G AV+WVQM
Sbjct: 127 VAATDTSCESVVTSGQHQHNPTPQHPPRDASPAGLLSIAEETLAEFLSKAKGAAVDWVQM 186

Query: 184 PGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP--------------- 228
           PGMKPGPDS+GIVAIS+ C+GVAARACGLVGL+PT+VAEILKDRP               
Sbjct: 187 PGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTAF 246

Query: 229 ---RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPV 279
               G  I       YA TTLA ARDFW LRYT+VLEDGSLVVCERSL   Q GP++PPV
Sbjct: 247 PTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPV 306

Query: 280 QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAA 339
           QHFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRPLYESSTVLAQK T+AA
Sbjct: 307 QHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAA 366

Query: 340 LRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
           LR+LRQ+AQE T   V GWGR+PA LR  SQRLSRGFNEAVNGFTD+GW+++G+DG++DV
Sbjct: 367 LRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLLGSDGVEDV 426

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADN 459
           T+ +NSSP+K     ++ +NG   +   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD+
Sbjct: 427 TIAINSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADS 486

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
           NID YSAAA+K  P S+PGSR G F GSQVILPLAHT+EHEEF+EVIKLEG G + E+A+
Sbjct: 487 NIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAV 546

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS-SP 577
           + RDMFLLQLCSG+DENA G CAEL+FAPID SFADDAPLLPSGFR+IPL+S  + S  P
Sbjct: 547 LSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGGP 606

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
           NRTLDLASALE+G AG R + +   NS  +RSV+TIAF+F +ESH++E+VA MARQYVRS
Sbjct: 607 NRTLDLASALEVGSAGTRTSGDSGANSN-LRSVLTIAFQFTYESHLRENVAAMARQYVRS 665

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
           +++SVQRVA+AL+PS +S+    R P GTPEALTLARWIC SYR ++GVDL ++  E SE
Sbjct: 666 VVASVQRVAMALAPSRLSAHVSPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASE 725

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
           S+LK LWHH+DA+MCCS+K+LPVFTFANQAGLDMLETTLVALQDI+L+KI D++GRK+ F
Sbjct: 726 SVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFF 785

Query: 758 AEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            ++ QI+QQG+A L  GICLSSMGRP SY+RA+AWKVLN+E++ HCI FMF+NWSF+
Sbjct: 786 TDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM 842


>gi|90110450|gb|ABD90527.1| class III homeodomain-leucine zipper [Pseudotsuga menziesii]
          Length = 842

 Score = 1273 bits (3294), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/837 (72%), Positives = 704/837 (84%), Gaps = 30/837 (3%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           KD K  S+D  KYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 8   KDAKN-SMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 66

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ  Q+ +
Sbjct: 67  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNAS 126

Query: 126 LATKDTSCESVVTSGQHHL--TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 183
           +A  DTSCESVVTSGQH    TPQHPPRDASPAGLLSIAEETL EFLSKA G AV+WVQM
Sbjct: 127 VAATDTSCESVVTSGQHQHNPTPQHPPRDASPAGLLSIAEETLAEFLSKAKGAAVDWVQM 186

Query: 184 PGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP--------------- 228
           PGMKPGPDS+GIVAIS+ C+GVAARACGLVGL+PT+VAEILK+RP               
Sbjct: 187 PGMKPGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEILKERPSWLRDCRCLDVLTAF 246

Query: 229 ---RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPV 279
               G  I       YA TTLA ARDFW LRYT+VLEDGSLVVCERSL   Q GP++PPV
Sbjct: 247 PTGNGGTIELLYMQTYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPV 306

Query: 280 QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAA 339
           QHFVRAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRPLYESSTVLAQK T+AA
Sbjct: 307 QHFVRAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAA 366

Query: 340 LRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
           LR+LRQ+AQE T   V GWGR+PA LR  SQRLSRGFNEAVNGFTD+GW++MG+DG++DV
Sbjct: 367 LRRLRQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGSDGVEDV 426

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADN 459
           T+ +NSSP+K  G  ++ +NG   +   + CAKASMLLQNVPPA+L+RFLREHRSEWAD+
Sbjct: 427 TIAINSSPNKHFGSQVNASNGLTTLGGGIPCAKASMLLQNVPPALLVRFLREHRSEWADS 486

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
           NID YSAAA+K  P S+PGSR G F GSQVILPLAHT+EHEEF+EVIKLEG G + E+A+
Sbjct: 487 NIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAV 546

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS-SP 577
           + RDMFLLQLCSG+DENA G CAEL+FAPID SFADDAPLLPSGFR+IPL+S  + S  P
Sbjct: 547 LSRDMFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGGP 606

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
           NRTLDLASALE+G AG R + +   NS  +RSV+TIAF+F +ESH++E+VA MARQYVR+
Sbjct: 607 NRTLDLASALEVGSAGTRTSGDSGANSN-LRSVLTIAFQFTYESHLRENVAAMARQYVRT 665

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
           +++SVQRVA+AL+PS +SS  G R P GTPEALTLARWIC SYR ++GVDL ++  + SE
Sbjct: 666 VVASVQRVAMALAPSRLSSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCDASE 725

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
           S+LK LWHH+DA+MCCS+K+LPVFTFANQAGLDMLETTLVALQDI+L+KI D++GRK+ F
Sbjct: 726 SVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFF 785

Query: 758 AEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            ++ QI+QQG+A L  GICLSSMGRP SY+RA+AWKVLN+E++ HCI FMF+NWSF+
Sbjct: 786 TDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFVNWSFM 842


>gi|90110452|gb|ABD90528.1| class III homeodomain-leucine zipper [Pseudotsuga menziesii]
          Length = 840

 Score = 1248 bits (3230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 593/840 (70%), Positives = 705/840 (83%), Gaps = 26/840 (3%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           M ++    ++ +++ GKYVRYT EQVEALERLY++CPKPSS+RRQQLIRECPILS+IEPK
Sbjct: 1   MTVTVVTAQSCAMEAGKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRK ASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 
Sbjct: 61  QIKVWFQNRRCREKQRKGASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQ 120

Query: 121 TQSTTLATKDTSCESVVTSG--QHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAV 178
            Q+ ++AT DTSCESVVTSG  QHHLTPQHPPRDA+PAG LSIAEETLT+FLSKAT TAV
Sbjct: 121 IQTVSIATTDTSCESVVTSGPHQHHLTPQHPPRDANPAGFLSIAEETLTQFLSKATETAV 180

Query: 179 EWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP---------- 228
           +W+QMPGMKPGPDS+GIV IS+ C+G+AARACG  GLEP++VA+ILKDRP          
Sbjct: 181 DWIQMPGMKPGPDSIGIVTISNSCTGIAARACGFAGLEPSKVADILKDRPAWLHDCRCLD 240

Query: 229 --------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGP 274
                   +G  I      +YA TTLAPARD W LRYTS+LEDGSLVVCERSL   Q+GP
Sbjct: 241 VLTAFPTGKGGTIELLYTQMYAPTTLAPARDLWTLRYTSLLEDGSLVVCERSLTGTQSGP 300

Query: 275 TMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 334
            MP VQHFVRA+MLPSGYLIRPCEGGG IIHIVDHMDLEPW+VPEV+RPLYESS VLAQK
Sbjct: 301 NMPSVQHFVRAQMLPSGYLIRPCEGGGCIIHIVDHMDLEPWTVPEVIRPLYESSAVLAQK 360

Query: 335 TTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
            T+ ALR LRQ+AQEV+   V GWGR+PAALRA SQRL RGFN+AVNGF D+GW+++G+D
Sbjct: 361 MTITALRHLRQVAQEVSGEVVLGWGRQPAALRAFSQRLCRGFNDAVNGFVDDGWSLLGSD 420

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
           G++DV + +NSSP+KL+G  L+ ++G  A++  +LCAKASMLLQNVPPA+L+RFLREHRS
Sbjct: 421 GVEDVIIAINSSPNKLLGSQLASSDGLSALNGGILCAKASMLLQNVPPALLVRFLREHRS 480

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EWAD NID YS+A +K    ++PGS  G  GSQVILPLAHT+EHEEF+EVIKLEG G + 
Sbjct: 481 EWADCNIDAYSSATMKANAFNVPGSLGGITGSQVILPLAHTVEHEEFLEVIKLEGHGLTH 540

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET 574
           E+A++ +DMFLLQLCSG+DE A G CA+L FAPIDASFADDAPLLPSGFR+IPL+SG +T
Sbjct: 541 EEALLSKDMFLLQLCSGIDEQAAGFCAQLAFAPIDASFADDAPLLPSGFRVIPLESGSDT 600

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
           S PNRTLDLASALE+G AG RA+ +   +   +RSV+TIAF+F +++H++++VA+MARQY
Sbjct: 601 SPPNRTLDLASALEVGSAGARASGDCGDSPYNLRSVLTIAFQFTYQNHVRDNVASMARQY 660

Query: 635 VRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
           VR +I+SVQRV++AL+PS  S   G R P GTPEALTL RWIC SYR +LG++LL S+SE
Sbjct: 661 VRHVIASVQRVSVALAPSLQSPHLGPRPPPGTPEALTLTRWICQSYRMHLGLELLGSNSE 720

Query: 695 GSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 754
            +ES+LK LWHH+D +MCCS K LPVFTFANQAGLDMLETTLVALQDI+LEKI DD+GRK
Sbjct: 721 TNESVLKLLWHHSDGIMCCSWKTLPVFTFANQAGLDMLETTLVALQDISLEKILDDNGRK 780

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            L ++F QIMQQG+A L  GIC+SSMGRPVSY+RA+AWKVLN+E++ HCI FMF+NWSFV
Sbjct: 781 RLCSDFTQIMQQGYAYLPAGICISSMGRPVSYDRAIAWKVLNDEDSTHCIAFMFVNWSFV 840


>gi|89514871|gb|ABD75310.1| class III homeodomain-leucine zipper protein C3HDZ2 [Pseudotsuga
           menziesii]
          Length = 839

 Score = 1246 bits (3225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 593/840 (70%), Positives = 706/840 (84%), Gaps = 27/840 (3%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           M ++    ++ +++ GKYVRYT EQVEALERLY++CPKPSS+RRQQLIRECPILS+IEPK
Sbjct: 1   MTVTVVTAQSCAMEAGKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQ 120

Query: 121 TQSTTLATKDTSCESVVTSG--QHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAV 178
            Q+ ++AT DTSCESVVTSG  QHHLTPQHPPRDA+PAG LSIAEETLT+FLSKAT TAV
Sbjct: 121 IQTVSIATTDTSCESVVTSGPHQHHLTPQHPPRDANPAGFLSIAEETLTQFLSKATETAV 180

Query: 179 EWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP---------- 228
           +W+QMPGMKPGPDS+GIV IS+ C+G+AARACG  GLEP++VA+ILKDRP          
Sbjct: 181 DWIQMPGMKPGPDSIGIVTISNSCTGIAARACGFAGLEPSKVADILKDRPAWLHDCRCLD 240

Query: 229 --------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGP 274
                   +G  I      +YA TTLAPARD W LRYTS+LEDGSLVVCERSL   Q+GP
Sbjct: 241 VLTAFPTGKGGTIELLYTQMYAPTTLAPARDLWTLRYTSLLEDGSLVVCERSLTGTQSGP 300

Query: 275 TMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 334
            MP VQHFVRA+MLPSGYLIRPCEGGG IIHIVDHMDLEPW+VPEV+RPLYESS VLAQK
Sbjct: 301 NMPSVQHFVRAQMLPSGYLIRPCEGGGCIIHIVDHMDLEPWTVPEVIRPLYESSAVLAQK 360

Query: 335 TTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
            T+ ALR LRQ+AQEV+   V GWGR+PAALRA SQRL RGFN+AVNGF D+GW+++G+D
Sbjct: 361 MTITALRHLRQVAQEVSGEVVLGWGRQPAALRAFSQRLCRGFNDAVNGFVDDGWSLLGSD 420

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
           G++DV + +NS+P+KL+G  L+ ++G  A++  +LCAKASMLLQNVPPA+ +RFLREHRS
Sbjct: 421 GVEDVIIAINSTPNKLLGSQLASSDGLSALNGGILCAKASMLLQNVPPALPVRFLREHRS 480

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EWAD NID YS+A +K    ++PGS  G  GSQVILPLAHT+EHEEF+EVIKLEG G + 
Sbjct: 481 EWADCNIDAYSSATMKANAFNVPGSLGGITGSQVILPLAHTVEHEEFLEVIKLEGHGLTH 540

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET 574
           E+A++ +DMFLLQLCSG+DE A G CA+L FAPIDASFADDAPLLPSGFR+IPL+SG +T
Sbjct: 541 EEALLSKDMFLLQLCSGIDEQAAGFCAQLAFAPIDASFADDAPLLPSGFRVIPLESGSDT 600

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
           S PNRTLDLASALE+G AG RA+ +   +S  +RSV+TIAF+F +++H++++VA+MARQY
Sbjct: 601 SPPNRTLDLASALEVGSAGARASGDCG-DSPNLRSVLTIAFQFTYQNHVRDNVASMARQY 659

Query: 635 VRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
           VR +I+SVQRV++AL+PS  S   G R P GTPEALTL RWIC SYR +LG++LL S+SE
Sbjct: 660 VRHVIASVQRVSVALAPSLQSPHLGPRPPPGTPEALTLTRWICQSYRMHLGLELLGSNSE 719

Query: 695 GSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 754
            +ES+LK LWHH+D +MCCS K LPVFTFANQAGLDMLETTLVALQDI+LEKI DD+GRK
Sbjct: 720 TNESVLKLLWHHSDGIMCCSWKTLPVFTFANQAGLDMLETTLVALQDISLEKILDDNGRK 779

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            L ++F QIMQQG+A L  GIC+SSMGRPVSY+RA+AWKVLN+E++ HCI FMF+NWSFV
Sbjct: 780 RLCSDFTQIMQQGYAYLPAGICISSMGRPVSYDRAIAWKVLNDEDSTHCIAFMFVNWSFV 839


>gi|110349552|gb|ABG73251.1| class III HD-Zip protein HDZ32 [Ginkgo biloba]
          Length = 779

 Score = 1245 bits (3221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 592/779 (75%), Positives = 677/779 (86%), Gaps = 29/779 (3%)

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST 124
           WFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ  Q+ 
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQLQNA 60

Query: 125 TLATKDTSCESVVTSGQH----HLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           ++AT DTSCESVVTSGQH    HLT +HPPRDASPAGLLSIAEETLTEFLSKATGTAVEW
Sbjct: 61  SIATTDTSCESVVTSGQHQQQNHLTARHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 120

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           +QMPGMKPGPDS+GIVAISHGC+GVAARACGLVG+EPT+VAEILKDRP            
Sbjct: 121 IQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGIEPTKVAEILKDRPSWFRDCRCVDVL 180

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  +      +YA TTLA ARDFW LRYTSVLEDGSLVVCERSL   Q GP+M
Sbjct: 181 TAFSTGNGGTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQGGPSM 240

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK T
Sbjct: 241 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMT 300

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           MAALR LRQ+AQEV+   V GWGR+PAALR  SQRL +GFNEAVNGFTD+GW++MGNDG 
Sbjct: 301 MAALRHLRQIAQEVSCDVVLGWGRQPAALRTFSQRLGKGFNEAVNGFTDDGWSLMGNDGT 360

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           DDVT+L+NSSP+K++G  L+ + GFPA+   +LCAKASMLLQNVPPA+L+RFLREHRSEW
Sbjct: 361 DDVTILINSSPNKILGSQLASSEGFPALGGGILCAKASMLLQNVPPALLVRFLREHRSEW 420

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           AD+NID YSAAA+K  PCS+P SR+G FG  QVILPLAHT+EHEEF+EVIKLEG G + E
Sbjct: 421 ADSNIDAYSAAALKASPCSVPSSRIGGFGGGQVILPLAHTVEHEEFLEVIKLEGNGLTQE 480

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS 575
           +A++ R+MFLLQLCSG+DENAVG CAEL+FAPIDASFAD+APLLPSGFR+IPLDSG + S
Sbjct: 481 EALLSREMFLLQLCSGVDENAVGACAELVFAPIDASFADNAPLLPSGFRVIPLDSGVDGS 540

Query: 576 SPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYV 635
           SPNRTLDLASALEIGPAG R + +Y  NS  +RSV+TIAF+F +E H++E+VA+MARQYV
Sbjct: 541 SPNRTLDLASALEIGPAGTRVSGDYGGNSGNLRSVLTIAFQFTYEDHLRENVASMARQYV 600

Query: 636 RSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEG 695
           RS+++SVQRVA+AL+PS +SS  G R P GTPEALTLARWICHSYR +LGV+LL+++ E 
Sbjct: 601 RSVVASVQRVAMALAPSRLSSHLGPRPPPGTPEALTLARWICHSYRFHLGVELLRANCEA 660

Query: 696 SESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKA 755
           +ES+LK LWHH+DA++CCSLK+LPVFTFANQAGLDMLETTLVALQDI+LEKI DD+GRK+
Sbjct: 661 NESVLKMLWHHSDAIICCSLKSLPVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKS 720

Query: 756 LFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           L ++F QIMQQG+A L  GIC+SSMGRPVSY+RA+AWKVLN+EE+ HCI FMF+NWSFV
Sbjct: 721 LCSDFAQIMQQGYAYLPAGICVSSMGRPVSYDRAIAWKVLNDEESTHCIAFMFMNWSFV 779


>gi|317160482|gb|ADV04323.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 836

 Score = 1238 bits (3202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 590/840 (70%), Positives = 699/840 (83%), Gaps = 30/840 (3%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           M M+    ++  ++ GKYVRYT EQVEALERLY++CPKPSS+RRQQLIRECPILS+IEPK
Sbjct: 1   MTMTVVTAQSCGMEAGKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQ 120

Query: 121 TQSTTLATKDTSCESVVTSGQH--HLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAV 178
            Q+ ++AT DTSCESVVTSG H  HLTPQHPPRDASPAG LSIAEETLT+ LSKAT TAV
Sbjct: 121 IQTVSIATTDTSCESVVTSGPHPHHLTPQHPPRDASPAGFLSIAEETLTQLLSKATETAV 180

Query: 179 EWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP---------- 228
           +W+QMPGMKPGPDS+GIV IS+ C+GVAARACG  GLEP++VA+ILKDRP          
Sbjct: 181 DWIQMPGMKPGPDSIGIVTISNSCTGVAARACGFAGLEPSKVADILKDRPAWLHDCRCLN 240

Query: 229 --------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGP 274
                   +G  +      +YA TTLAPARD   LRYTS+LEDGSLVVCERSL  IQ+GP
Sbjct: 241 VLTAFPTGKGGTVEVLYTQMYAPTTLAPARDLLTLRYTSLLEDGSLVVCERSLTGIQSGP 300

Query: 275 TMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 334
            MP VQHFVRA+MLPSGYLIRPCEGGG IIHIVDHMDLEPWSVPEV+RPLYESS VLA +
Sbjct: 301 NMPSVQHFVRAQMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVIRPLYESSAVLATR 360

Query: 335 TTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
            T+ ALR LRQ+AQEV+   V GWGR+PAALRA SQRL RGFN+AVNGF D+GW+++G+D
Sbjct: 361 VTITALRHLRQVAQEVSGEVVLGWGRQPAALRAFSQRLCRGFNDAVNGFVDDGWSLLGSD 420

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
           G++DV + +NSSP K +G  L+ ++G  A++  +LCAKASMLLQNVPPA+L+RFLREHRS
Sbjct: 421 GVEDVIIAINSSPSKFLGSQLASSDGISALNGGILCAKASMLLQNVPPALLVRFLREHRS 480

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EWAD N+D YS+A +K    ++PGS  G  GSQVILPLAHT+EHEEF+EVIKLEG G + 
Sbjct: 481 EWADCNVDAYSSATMKANAYNVPGSLGGITGSQVILPLAHTVEHEEFLEVIKLEGQGLTH 540

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET 574
           E+A++ +DMFLLQLCSG+DE+AVG CA+L+FAPIDASFADDAPLLPSGFR+IPL+SG + 
Sbjct: 541 EEALLSKDMFLLQLCSGIDEHAVGFCAQLVFAPIDASFADDAPLLPSGFRVIPLESGSDA 600

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
           S PNRTLDLASALE+G AG RA+ +   +   +RSV+TIAF+F +++H+++ VA MARQY
Sbjct: 601 SPPNRTLDLASALEVGSAGTRASGDCGDSPYNLRSVLTIAFQFTYQNHVRDSVAAMARQY 660

Query: 635 VRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
           VR +I+SVQRVA+AL+PS  S       P GTPEALTLARWIC SYR +LG++L++SSSE
Sbjct: 661 VRHVIASVQRVAIALAPSLQSPHP----PPGTPEALTLARWICESYRMHLGLELIESSSE 716

Query: 695 GSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 754
            +ES+LK LWHH+D +MCCS K LPVFTFANQAGLDMLETTLVALQDI+LEKI D++GRK
Sbjct: 717 TNESVLKLLWHHSDGIMCCSWKTLPVFTFANQAGLDMLETTLVALQDISLEKILDENGRK 776

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            L ++F QIMQQG+A L  GIC+SSMGRPVSY+RA+AWKVLN+E+  HCI FMF+NWSFV
Sbjct: 777 RLCSDFTQIMQQGYAYLPAGICISSMGRPVSYDRAIAWKVLNDEDVTHCISFMFVNWSFV 836


>gi|110349544|gb|ABG73247.1| class III HD-Zip protein HDZ33 [Pinus taeda]
          Length = 840

 Score = 1228 bits (3178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/840 (69%), Positives = 695/840 (82%), Gaps = 26/840 (3%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           M ++    ++  ++ GKYVRYT EQVEALERLY++CPKPSS+RRQQLIRECPILS+IEPK
Sbjct: 1   MTVTVVTAQSFGMEAGKYVRYTAEQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQ 120

Query: 121 TQSTTLATKDTSCESVVTSGQH--HLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAV 178
            Q+ ++ T DTSCESVVTSG H  HLTPQHPPRDASPAG LSIAEETLT+FLSKAT TAV
Sbjct: 121 IQTVSITTTDTSCESVVTSGPHPHHLTPQHPPRDASPAGFLSIAEETLTQFLSKATETAV 180

Query: 179 EWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP---------- 228
           +W+QMPGMKPGPDS+GIV IS+ C+GVAARACG  GLEP++VA+ILKDRP          
Sbjct: 181 DWIQMPGMKPGPDSIGIVTISNSCTGVAARACGFAGLEPSKVADILKDRPAWLHDCRRLD 240

Query: 229 --------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGP 274
                   +G A       +YA TTLAPARD   LRYTS+LEDGSLVVCERSL   Q+GP
Sbjct: 241 VLTAFPTGKGGAFELLYTQMYAPTTLAPARDLLTLRYTSLLEDGSLVVCERSLTGTQSGP 300

Query: 275 TMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 334
            MPPVQHFVR +MLPSGYLIRPCEGGG IIHIVDHMDLEPWSVPEV+RPLYESS VLAQK
Sbjct: 301 NMPPVQHFVRTQMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVIRPLYESSAVLAQK 360

Query: 335 TTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
            T+ ALR LRQ+AQEV+   V GWGR+PAALRA SQRL RGFN+AVNGF D+GW+++G+D
Sbjct: 361 MTITALRHLRQVAQEVSGEVVLGWGRQPAALRAFSQRLCRGFNDAVNGFADDGWSLLGSD 420

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
           G++DV + +NSSP K +   ++ ++G  A++  ++CAKASMLLQNVPPA+L+RFLREHRS
Sbjct: 421 GVEDVIIAINSSPSKFLSSQIASSDGLSALNGGIMCAKASMLLQNVPPALLVRFLREHRS 480

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EWAD NID YS+A +K    ++PGS  G  GSQVILPLAHT+EHEEF+EVIKLEG G + 
Sbjct: 481 EWADCNIDAYSSATMKANAYNVPGSLGGITGSQVILPLAHTVEHEEFLEVIKLEGHGLTH 540

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET 574
           E+A++ +DMFLLQLCSG+DE+A G C++L+FAPIDASFADDAPLLPSGFR+IPL+SG + 
Sbjct: 541 EEALLSKDMFLLQLCSGIDEHAAGFCSQLVFAPIDASFADDAPLLPSGFRVIPLESGSDV 600

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
           S PNRTLDLASALEIG AG RA+ +   +   +RSV+TIAF+F +++++++ VA M RQY
Sbjct: 601 SPPNRTLDLASALEIGSAGTRASGDCGDSPCNLRSVLTIAFQFTYQNNVRDSVAAMTRQY 660

Query: 635 VRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
           VR++I+SVQRVA+AL+PS  S   G R P GTPEALTL RWI  SYR +LG++L+  +SE
Sbjct: 661 VRNVIASVQRVAIALAPSQQSPHIGPRLPPGTPEALTLTRWIFQSYRMHLGLELIGDNSE 720

Query: 695 GSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 754
            +ES+LK LWHH+D +MCCS K LPVFTFANQAGLDMLETTLVALQDI+LEKI D++GRK
Sbjct: 721 PNESVLKLLWHHSDGIMCCSWKPLPVFTFANQAGLDMLETTLVALQDISLEKILDENGRK 780

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            L ++F QIMQQG+A L  GIC+SSMGRPVSY+RA+AWKVLN+E+  HCI FMF+NWSFV
Sbjct: 781 RLCSDFTQIMQQGYAYLPSGICISSMGRPVSYDRAIAWKVLNDEDVIHCIAFMFLNWSFV 840


>gi|255550932|ref|XP_002516514.1| DNA binding protein, putative [Ricinus communis]
 gi|223544334|gb|EEF45855.1| DNA binding protein, putative [Ricinus communis]
          Length = 782

 Score = 1224 bits (3166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/818 (75%), Positives = 675/818 (82%), Gaps = 74/818 (9%)

Query: 5   CKDGKTG-SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           CKDG +  ++DNGKYVRYTPEQVEALERLYHECPKPSS+RRQQLIRECPILSNIEPKQIK
Sbjct: 9   CKDGGSKIAMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIK 68

Query: 64  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ- 122
           VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN YFRQ TQ 
Sbjct: 69  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYFRQQTQN 128

Query: 123 STTLATKDT--SCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           +T LAT DT  SCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETL EFLSKATGTAVEW
Sbjct: 129 ATNLATTDTNTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEW 188

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQMPGMKPGPDS+GIVAISHGC GVAARACGLVGLEPTRVAEILKDRP            
Sbjct: 189 VQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVL 248

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I      LYA TTLAPARDFWLLRYTSVLEDGSLV+CERSL N QNGP+M
Sbjct: 249 NALSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLNNTQNGPSM 308

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           PP QHFVRAEMLPSGYLIRPCEGGGSIIHIVDH+DLE                       
Sbjct: 309 PPTQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHVDLE----------------------- 345

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
             ALR LRQ++QEV+Q +V+GWGRRPAALRALSQRLS+GFNEA+NGFTDEG    GN   
Sbjct: 346 --ALRHLRQISQEVSQPNVSGWGRRPAALRALSQRLSKGFNEAINGFTDEGVVHAGN--- 400

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
                       K+MGLN+S+A+GFPA+SN VLCAKASMLLQNVPPAILLRFLREHRSEW
Sbjct: 401 ------------KMMGLNISYASGFPAMSNGVLCAKASMLLQNVPPAILLRFLREHRSEW 448

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
           AD  ID Y+AAA+K GPC+LP +R G FG QVILPLAHTIEHEEFMEVIKLE +G+  ED
Sbjct: 449 ADTGIDAYAAAAVKAGPCTLPVARAGNFGGQVILPLAHTIEHEEFMEVIKLENMGYR-ED 507

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSS 576
            IMP D+FLLQLCSG+DENAVGTCAEL+FAPIDASF+DDAP++PSGFRIIPLDS  + +S
Sbjct: 508 MIMPGDIFLLQLCSGVDENAVGTCAELVFAPIDASFSDDAPIIPSGFRIIPLDSKMDVTS 567

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
           PNRTLDLASALE+GPAGN+A+ +   +    +SVMTIAF+FAFE H+QE+VA+MARQYVR
Sbjct: 568 PNRTLDLASALEVGPAGNKASGDLPGHCGSTKSVMTIAFQFAFEIHLQENVASMARQYVR 627

Query: 637 SIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS 696
           S+I+SVQRVALALSPS   S   LR P GTPEA TL+ WIC SYRCYLGV+LLK  +EGS
Sbjct: 628 SVIASVQRVALALSPSRFGSNPSLRPPPGTPEAHTLSSWICQSYRCYLGVELLK--NEGS 685

Query: 697 ESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKAL 756
           ESILK+LWHH DA+MCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDD+GRK L
Sbjct: 686 ESILKSLWHHADALMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGRKTL 745

Query: 757 FAEFPQIMQQGFACLQ-GGICLSSMGRPVSYERAVAWK 793
            +EFPQIMQQGF CLQ    C    G+   YERAVAWK
Sbjct: 746 CSEFPQIMQQGFMCLQVASAC--QYGKTSIYERAVAWK 781


>gi|222424857|dbj|BAH20380.1| AT1G52150 [Arabidopsis thaliana]
          Length = 702

 Score = 1209 bits (3128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 594/706 (84%), Positives = 632/706 (89%), Gaps = 30/706 (4%)

Query: 135 SVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVG 194
           SVVTSGQH L  Q+P RDASPAGLLSIAEETL EFLSKATGTAVEWVQMPGMKPGPDS+G
Sbjct: 1   SVVTSGQHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIG 60

Query: 195 IVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI--- 233
           I+AISHGC+GVAARACGLVGLEPTRVAEI+KDRP                   G  +   
Sbjct: 61  IIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVMNVLPTANGGTVELL 120

Query: 234 ---LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
              LYA TTLAP RDFWLLRYTSVLEDGSLVVCERSLK+ QNGP+MP VQ+FVRAEML S
Sbjct: 121 YMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEMLSS 180

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEV 350
           GYLIRPC+GGGSIIHIVDHMDLE  SVPEVLRPLYES  VLAQKTTMAALRQL+Q+AQEV
Sbjct: 181 GYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQLKQIAQEV 240

Query: 351 TQ--SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           TQ  SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW+V+G D MDDVT+ VNSSPD
Sbjct: 241 TQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-DSMDDVTITVNSSPD 299

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAA 468
           KLMGLNL+FANGF  VSN VLCAKASMLLQNVPPAILLRFLREHRSEWADNNID Y AAA
Sbjct: 300 KLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAYLAAA 359

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
           +KVGPCS   +RVG FG QVILPLAHTIEHEEFMEVIKLEG+GHSPEDAI+PRD+FLLQL
Sbjct: 360 VKVGPCS---ARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDIFLLQL 416

Query: 529 CSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALE 588
           CSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS KE SSPNRTLDLASALE
Sbjct: 417 CSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEVSSPNRTLDLASALE 476

Query: 589 IGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALA 648
           IG AG +A+ + S NSTC RSVMTIAFEF  ESHMQEHVA+MARQYVR IISSVQRVALA
Sbjct: 477 IGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQYVRGIISSVQRVALA 536

Query: 649 LSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTD 708
           LSPS+ISSQ GLRTPLGTPEA TLARWIC SYR Y+GV+LLKS+S+G+ESILKNLWHHTD
Sbjct: 537 LSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSDGNESILKNLWHHTD 596

Query: 709 AVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGF 768
           A++CCS+KALPVFTFANQAGLDMLETTLVALQDI+LEKIFDD+GRK L +EFPQIMQQGF
Sbjct: 597 AIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGF 656

Query: 769 ACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           ACLQGGICLSSMGRPVSYERAVAWKVLNEEE AHCICF+FINWSFV
Sbjct: 657 ACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV 702


>gi|110349554|gb|ABG73252.1| class III HD-Zip protein HDZ33 [Ginkgo biloba]
          Length = 776

 Score = 1202 bits (3109), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 572/776 (73%), Positives = 660/776 (85%), Gaps = 26/776 (3%)

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST 124
           WFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ  Q+ 
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYLRQQIQTA 60

Query: 125 TLATKDTSCESVVTSG--QHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           ++AT DTSCESVVTSG  QHHLTPQHPPRDASPAGLLSIAEETLT+FLSKATGTAV+W+Q
Sbjct: 61  SIATTDTSCESVVTSGPHQHHLTPQHPPRDASPAGLLSIAEETLTQFLSKATGTAVDWIQ 120

Query: 183 MPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------------- 228
           MPGMKPGPDS+GIVAISH C+GVA+RACGLVGLE ++VAEILKDRP              
Sbjct: 121 MPGMKPGPDSIGIVAISHSCTGVASRACGLVGLESSKVAEILKDRPSWLRDCRCLDVLTA 180

Query: 229 ----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPP 278
                G  I      +YA TTLA ARD W LRYTSVLEDGSLVVCERSL   Q GP MP 
Sbjct: 181 FPTGNGGTIELLYTQMYAPTTLASARDIWTLRYTSVLEDGSLVVCERSLTGTQGGPNMPS 240

Query: 279 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA 338
           VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEV+RPLYESSTVLAQK T++
Sbjct: 241 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVIRPLYESSTVLAQKMTIS 300

Query: 339 ALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD 398
           ALR LRQ+AQEV+   V GWGR+PAALRA SQRL RGFNEAVNGFTD+GW+++GNDGMDD
Sbjct: 301 ALRHLRQVAQEVSGEVVLGWGRQPAALRAFSQRLGRGFNEAVNGFTDDGWSLLGNDGMDD 360

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 458
           VT+ +NSSP KL+   L+ ++G  A+   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD
Sbjct: 361 VTIAINSSPSKLLASQLAASDGLAALGGGILCAKASMLLQNVPPALLVRFLREHRSEWAD 420

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
            NID YS+AA+K  P S+P SR G FGSQVILPLAHT+EHEEF+EVIKLEG G + E+ +
Sbjct: 421 CNIDAYSSAAMKANPYSIPSSRGGVFGSQVILPLAHTMEHEEFLEVIKLEGHGLTHEETV 480

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPN 578
           + RDMFLLQLCSG+DENAVG CA+L+FAPIDASFADDAPLLPSGFR+IPLDSG + S+PN
Sbjct: 481 LSRDMFLLQLCSGIDENAVGCCAQLVFAPIDASFADDAPLLPSGFRVIPLDSGTDGSTPN 540

Query: 579 RTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSI 638
           RTLDLASAL++G AG R + +Y +++  MRSV+TIAF+F +E+H++++VA MARQYVRS+
Sbjct: 541 RTLDLASALDVGSAGTRTSGDYGSSTYNMRSVLTIAFQFTYETHLRDNVAAMARQYVRSV 600

Query: 639 ISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSES 698
           ++SVQRVA+AL+PS  S+  G R P GTPEALTLA WIC SYR +LG++LL+   E SES
Sbjct: 601 VASVQRVAMALAPSRQSTLLGPRPPPGTPEALTLAGWICQSYRFHLGLELLRGDCEASES 660

Query: 699 ILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFA 758
           +LK LWHH+DA+MCCS K LPVFTFANQAGLDMLETTLVALQDI+LEKI D++GRK+L +
Sbjct: 661 VLKLLWHHSDAIMCCSWKTLPVFTFANQAGLDMLETTLVALQDISLEKILDENGRKSLCS 720

Query: 759 EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +F QIMQQG+A L  GIC+SSMGRPVSY+RA+AWKVLN+EE+ HCI FMF+NWSFV
Sbjct: 721 DFSQIMQQGYAYLPAGICVSSMGRPVSYDRAIAWKVLNDEESTHCIAFMFMNWSFV 776


>gi|383212093|dbj|BAM08933.1| class III homeobox-leucine zipper protein [Asparagus asparagoides]
          Length = 849

 Score = 1201 bits (3106), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/845 (69%), Positives = 689/845 (81%), Gaps = 41/845 (4%)

Query: 6   KDGKTGS--LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           ++GK+    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIK
Sbjct: 10  QNGKSSQQQIDAGKYVRYTPEQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPKQIK 69

Query: 64  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQS 123
           VWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY+NGY RQ  Q 
Sbjct: 70  VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYDNGYMRQ--QI 127

Query: 124 TTLATKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAV 178
            T+AT DTSCESVVTSGQHH     TPQHP RDA+ PAGLL+IAEETL EFLSKATGTAV
Sbjct: 128 HTVATTDTSCESVVTSGQHHQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAV 187

Query: 179 EWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------RGSA 232
           EWVQM GMKPGPDS+GI+A+SH CSGVAARACGLV LEPT+VAEILKDRP      R   
Sbjct: 188 EWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRSLD 247

Query: 233 IL------------------YALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGP 274
           +L                  YA TTLA ARDFW LRYT+ LEDGSLV+CERSL     GP
Sbjct: 248 VLTVIPTGNGGNIELMYMQTYAPTTLASARDFWTLRYTTGLEDGSLVICERSLTPSTGGP 307

Query: 275 TMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK 334
             PP   FVRAEMLPSGYLIRPCEGGGS+IHIVDHMDL+ WSVPEVLRPLYES  +LAQK
Sbjct: 308 AGPPASGFVRAEMLPSGYLIRPCEGGGSMIHIVDHMDLDAWSVPEVLRPLYESPKILAQK 367

Query: 335 TTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
            T+AAL  +RQ+AQE +     G GR+PA LR  SQRLS+GFN+AVNGFTD GW+++G+D
Sbjct: 368 MTIAALHHIRQIAQETSGEIAYGGGRQPAVLRTFSQRLSKGFNDAVNGFTDNGWSLLGSD 427

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANG--FPAVSNAVLCAKASMLLQNVPPAILLRFLREH 452
           G++DVT+++NSSP+KL G   S AN   F  +   +LCAKASMLLQNVPPA+L+RFLREH
Sbjct: 428 GVEDVTIMINSSPNKLFG---SHANSSIFSPIGGGILCAKASMLLQNVPPALLVRFLREH 484

Query: 453 RSEWADNNIDVYSAAAIKVGPCSLPGSRV--GTFGSQVILPLAHTIEHEEFMEVIKLEGV 510
           RSEWAD  +D YSAA+++  P ++PG R   G  G QVILPLAHTIEHEEF+EVI+LEG 
Sbjct: 485 RSEWADCGVDAYSAASLRASPYAVPGLRASSGFMGGQVILPLAHTIEHEEFLEVIRLEGH 544

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
           G + +D IM RDMFLLQLCSG+DEN+VG CA+L+FAPID SFADDAPLLPSGFRIIPLD 
Sbjct: 545 GFTQDDVIMARDMFLLQLCSGVDENSVGACAQLVFAPIDESFADDAPLLPSGFRIIPLDP 604

Query: 571 GKETSSPNRTLDLASALEIGP-AGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVAT 629
             ++ +  RTLDLAS LE+GP +  R+ ++ ++N+  +RSV+TIAF+F FE+H++++VA 
Sbjct: 605 KTDSPAATRTLDLASTLEVGPGSAARSASDNASNAYNLRSVLTIAFQFTFENHLRDNVAA 664

Query: 630 MARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLL 689
           MARQYVRS+++SVQRVA+A++PS + SQ G++ P G+PEA TLARWI  SYR + GV+L 
Sbjct: 665 MARQYVRSVVASVQRVAMAIAPSRLGSQLGVKHPPGSPEAQTLARWISRSYRFHTGVELF 724

Query: 690 KSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFD 749
           ++ S+  +S+LK LW H+DA+MCCSLKA PVFTF+NQAGLDMLETTL+ALQDITLEKI D
Sbjct: 725 RAESQADDSLLKLLWQHSDAIMCCSLKATPVFTFSNQAGLDMLETTLIALQDITLEKILD 784

Query: 750 DHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFI 809
           D GRK L +EFP+IMQQGFA L GGIC+SSMGRPVSYE+AVAWKVLN++++ HC+ FMF+
Sbjct: 785 DGGRKVLCSEFPKIMQQGFAYLPGGICVSSMGRPVSYEQAVAWKVLNDDDSHHCLAFMFV 844

Query: 810 NWSFV 814
           NWSFV
Sbjct: 845 NWSFV 849


>gi|383212095|dbj|BAM08934.1| class III homeobox-leucine zipper protein [Asparagus officinalis]
          Length = 849

 Score = 1198 bits (3099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/836 (69%), Positives = 683/836 (81%), Gaps = 39/836 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D GKYVRYTPEQVEALER+Y ECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 19  IDAGKYVRYTPEQVEALERVYSECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 78

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY+NGY RQ  Q  T+AT DTS
Sbjct: 79  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYDNGYMRQ--QIHTVATTDTS 136

Query: 133 CESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
           CESVVTSGQHH     TPQHP RDA+ PAGLL+IAEETL EFLSKATGTAVEWVQM GMK
Sbjct: 137 CESVVTSGQHHQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVEWVQMVGMK 196

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------RGSAIL------- 234
           PGPDS+GI+A+SH CSGVAARACGLV LEPT+VAEILKDRP      R   +L       
Sbjct: 197 PGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRSLDVLTVIPTGN 256

Query: 235 -----------YALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
                      YA TTLA ARDFW LRYT+ LEDGSLV+CERSL     GP  PP   FV
Sbjct: 257 GGNIELMYMQTYAPTTLASARDFWTLRYTTGLEDGSLVICERSLTPSTGGPAGPPASGFV 316

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYLIRPCEGGGS+IHIVDHMDL+ WSVPEVLRPLYES  +LAQK T+AAL  +
Sbjct: 317 RAEMLPSGYLIRPCEGGGSMIHIVDHMDLDAWSVPEVLRPLYESPKILAQKMTIAALHHI 376

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE +     G GR+PA LR  SQRLS+GFN+AVNGFTD+GW+++G+DG++DVT+++
Sbjct: 377 RQIAQETSGEIAYGGGRQPAVLRTFSQRLSKGFNDAVNGFTDDGWSLLGSDGVEDVTIMI 436

Query: 404 NSSPDKLMGLNLSFANG--FPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNI 461
           NSSP+KL G   S AN   F  +   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD  +
Sbjct: 437 NSSPNKLFG---SHANSSIFSPIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADCGV 493

Query: 462 DVYSAAAIKVGPCSLPGSRV--GTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
           D YSAA+++  P ++PG R   G  G QVILPLAHT+EHEEF+EVI+LEG G + +D IM
Sbjct: 494 DAYSAASLRASPYAVPGLRASNGFMGGQVILPLAHTVEHEEFLEVIRLEGHGFTQDDVIM 553

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNR 579
            RDMFLLQLCSG+DEN+VG CA+L+FAPID SFADDAPLLPSGFRIIPLD   ++ +  R
Sbjct: 554 SRDMFLLQLCSGVDENSVGACAQLVFAPIDESFADDAPLLPSGFRIIPLDPKTDSPAATR 613

Query: 580 TLDLASALEIGP-AGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSI 638
           TLDLAS LE+GP +  R+ ++ ++N+  +RSV+TIAF+F FE+H++++VA MARQYVRS+
Sbjct: 614 TLDLASTLEVGPGSAARSASDNASNAYNLRSVLTIAFQFTFENHLRDNVAAMARQYVRSV 673

Query: 639 ISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSES 698
           ++SVQRVA+A++PS + +Q G++ P G+PEA TLARWI  SYR + GV+L ++  +  +S
Sbjct: 674 VASVQRVAMAIAPSRLGTQLGVKHPPGSPEAQTLARWISRSYRFHTGVELFRAEPQADDS 733

Query: 699 ILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFA 758
           +LK LW H+DA+MCCSLKA PVFTFANQAGLDMLETTL+ALQDITLEKI DD GRK L  
Sbjct: 734 LLKLLWQHSDAIMCCSLKATPVFTFANQAGLDMLETTLIALQDITLEKILDDGGRKILCL 793

Query: 759 EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           EFP+IMQQGFA L GGIC+SSMGRPVSYE+AVAWKVLN++++ HC+ FMF+NWSFV
Sbjct: 794 EFPKIMQQGFAYLPGGICVSSMGRPVSYEQAVAWKVLNDDDSHHCLAFMFVNWSFV 849


>gi|359483940|ref|XP_002281868.2| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 1
           [Vitis vinifera]
 gi|147820218|emb|CAN73584.1| hypothetical protein VITISV_033098 [Vitis vinifera]
 gi|297740817|emb|CBI30999.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score = 1191 bits (3081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/846 (68%), Positives = 675/846 (79%), Gaps = 33/846 (3%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MA+S        +D+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPK
Sbjct: 1   MALSMHKESKQQMDSSKYVRYTPEQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ 
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQ 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATG 175
            QS + AT DTSCESVV SGQH      TPQHP RDAS PAGLL+IAEETL EFLSKATG
Sbjct: 121 LQSASTATTDTSCESVVMSGQHQQQQNPTPQHPQRDASNPAGLLAIAEETLAEFLSKATG 180

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------- 228
           TAV+WVQM GMKPGPDS+GIVA+S  CSGVAARACGLV LEPT+VAEILKDRP       
Sbjct: 181 TAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCR 240

Query: 229 -----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  I       YA TTLA ARDFW LRYT+ LEDGSLV+CERSL +  
Sbjct: 241 CLDVLSVIPTGNGGTIELIYMQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTSST 300

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GPT PP   ++RAEMLPSGYLIRPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS +L
Sbjct: 301 GGPTGPPASSYIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKIL 360

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQKTT+AALR +RQ+AQE +     G GR+PA LR  SQRL RGFN+AVNGF D+GW++M
Sbjct: 361 AQKTTVAALRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFADDGWSLM 420

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           G+DG++DVT+++NSSP K +G   + +  FP     VLCAKASMLLQNVPPA+L+RFLRE
Sbjct: 421 GSDGVEDVTIVINSSPSKFLGPQYN-STMFPTFGGGVLCAKASMLLQNVPPALLVRFLRE 479

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGV 510
           HRSEWAD  +D YSAA +K  P  +P +R G F  SQVILPLAHT+EHEEF+EV++LEG 
Sbjct: 480 HRSEWADYGVDAYSAACLKASPYEVPCARPGGFPSSQVILPLAHTVEHEEFLEVVRLEGH 539

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
             SPED  + RDM+LLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD 
Sbjct: 540 AFSPEDVALTRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDP 599

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
             +  +  RTLDLAS LE+G  G R  N    N+  +RSV+TIAF+F FE+H++++VA M
Sbjct: 600 KTDGPAATRTLDLASTLEVGAGGARPANESDLNNYNLRSVLTIAFQFTFENHVRDNVAAM 659

Query: 631 ARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLK 690
           ARQYVRS+++SVQRVA+A++PS +SS  GL+   G+PEALTLARWIC SYR + G +LL+
Sbjct: 660 ARQYVRSVMASVQRVAMAIAPSRLSSHMGLKPLPGSPEALTLARWICRSYRIHTGGELLR 719

Query: 691 SSSEGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIF 748
             S+G +++LK LW+H+DA+MCCSLK  A PVFTFANQAGLDMLETTLVALQDI L+KI 
Sbjct: 720 VDSQGGDAVLKLLWNHSDAIMCCSLKTNASPVFTFANQAGLDMLETTLVALQDIMLDKIL 779

Query: 749 DDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMF 808
           D+ GRK L +EF +IMQQGFA L  GIC SSMGRPVSYE+A+AWKVLN+E++ HC+ FMF
Sbjct: 780 DEAGRKILCSEFSKIMQQGFAYLPAGICTSSMGRPVSYEQAIAWKVLNDEDSNHCLAFMF 839

Query: 809 INWSFV 814
           INWSFV
Sbjct: 840 INWSFV 845


>gi|359483942|ref|XP_003633040.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 2
           [Vitis vinifera]
          Length = 859

 Score = 1181 bits (3055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/860 (67%), Positives = 675/860 (78%), Gaps = 47/860 (5%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MA+S        +D+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPK
Sbjct: 1   MALSMHKESKQQMDSSKYVRYTPEQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ 
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQ 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATG 175
            QS + AT DTSCESVV SGQH      TPQHP RDAS PAGLL+IAEETL EFLSKATG
Sbjct: 121 LQSASTATTDTSCESVVMSGQHQQQQNPTPQHPQRDASNPAGLLAIAEETLAEFLSKATG 180

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------- 228
           TAV+WVQM GMKPGPDS+GIVA+S  CSGVAARACGLV LEPT+VAEILKDRP       
Sbjct: 181 TAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCR 240

Query: 229 -----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  I       YA TTLA ARDFW LRYT+ LEDGSLV+CERSL +  
Sbjct: 241 CLDVLSVIPTGNGGTIELIYMQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTSST 300

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GPT PP   ++RAEMLPSGYLIRPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS +L
Sbjct: 301 GGPTGPPASSYIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKIL 360

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQKTT+AALR +RQ+AQE +     G GR+PA LR  SQRL RGFN+AVNGF D+GW++M
Sbjct: 361 AQKTTVAALRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFADDGWSLM 420

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQ------------- 438
           G+DG++DVT+++NSSP K +G   + +  FP     VLCAKASMLLQ             
Sbjct: 421 GSDGVEDVTIVINSSPSKFLGPQYN-STMFPTFGGGVLCAKASMLLQVHRKSRQPCYLNL 479

Query: 439 -NVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTI 496
            NVPPA+L+RFLREHRSEWAD  +D YSAA +K  P  +P +R G F  SQVILPLAHT+
Sbjct: 480 QNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYEVPCARPGGFPSSQVILPLAHTV 539

Query: 497 EHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDA 556
           EHEEF+EV++LEG   SPED  + RDM+LLQLCSG+DENA G CA+L+FAPID SFADDA
Sbjct: 540 EHEEFLEVVRLEGHAFSPEDVALTRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDA 599

Query: 557 PLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFE 616
           PLLPSGFR+IPLD   +  +  RTLDLAS LE+G  G R  N    N+  +RSV+TIAF+
Sbjct: 600 PLLPSGFRVIPLDPKTDGPAATRTLDLASTLEVGAGGARPANESDLNNYNLRSVLTIAFQ 659

Query: 617 FAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWI 676
           F FE+H++++VA MARQYVRS+++SVQRVA+A++PS +SS  GL+   G+PEALTLARWI
Sbjct: 660 FTFENHVRDNVAAMARQYVRSVMASVQRVAMAIAPSRLSSHMGLKPLPGSPEALTLARWI 719

Query: 677 CHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLET 734
           C SYR + G +LL+  S+G +++LK LW+H+DA+MCCSLK  A PVFTFANQAGLDMLET
Sbjct: 720 CRSYRIHTGGELLRVDSQGGDAVLKLLWNHSDAIMCCSLKTNASPVFTFANQAGLDMLET 779

Query: 735 TLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKV 794
           TLVALQDI L+KI D+ GRK L +EF +IMQQGFA L  GIC SSMGRPVSYE+A+AWKV
Sbjct: 780 TLVALQDIMLDKILDEAGRKILCSEFSKIMQQGFAYLPAGICTSSMGRPVSYEQAIAWKV 839

Query: 795 LNEEETAHCICFMFINWSFV 814
           LN+E++ HC+ FMFINWSFV
Sbjct: 840 LNDEDSNHCLAFMFINWSFV 859


>gi|359483944|ref|XP_003633041.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 3
           [Vitis vinifera]
          Length = 862

 Score = 1173 bits (3034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 582/863 (67%), Positives = 675/863 (78%), Gaps = 50/863 (5%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MA+S        +D+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPK
Sbjct: 1   MALSMHKESKQQMDSSKYVRYTPEQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ 
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQ 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATG 175
            QS + AT DTSCESVV SGQH      TPQHP RDAS PAGLL+IAEETL EFLSKATG
Sbjct: 121 LQSASTATTDTSCESVVMSGQHQQQQNPTPQHPQRDASNPAGLLAIAEETLAEFLSKATG 180

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------- 228
           TAV+WVQM GMKPGPDS+GIVA+S  CSGVAARACGLV LEPT+VAEILKDRP       
Sbjct: 181 TAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCR 240

Query: 229 -----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  I       YA TTLA ARDFW LRYT+ LEDGSLV+CERSL +  
Sbjct: 241 CLDVLSVIPTGNGGTIELIYMQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTSST 300

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GPT PP   ++RAEMLPSGYLIRPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS +L
Sbjct: 301 GGPTGPPASSYIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKIL 360

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQKTT+AALR +RQ+AQE +     G GR+PA LR  SQRL RGFN+AVNGF D+GW++M
Sbjct: 361 AQKTTVAALRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFADDGWSLM 420

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           G+DG++DVT+++NSSP K +G   + +  FP     VLCAKASMLLQNVPPA+L+RFLRE
Sbjct: 421 GSDGVEDVTIVINSSPSKFLGPQYN-STMFPTFGGGVLCAKASMLLQNVPPALLVRFLRE 479

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGV 510
           HRSEWAD  +D YSAA +K  P  +P +R G F  SQVILPLAHT+EHEEF+EV++LEG 
Sbjct: 480 HRSEWADYGVDAYSAACLKASPYEVPCARPGGFPSSQVILPLAHTVEHEEFLEVVRLEGH 539

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
             SPED  + RDM+LLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD 
Sbjct: 540 AFSPEDVALTRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDP 599

Query: 571 GK--ETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVA 628
               E    +RTLDLAS LE+G  G R  N    N+  +RSV+TIAF+F FE+H++++VA
Sbjct: 600 KTVCEALYIDRTLDLASTLEVGAGGARPANESDLNNYNLRSVLTIAFQFTFENHVRDNVA 659

Query: 629 TMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSY-------- 680
            MARQYVRS+++SVQRVA+A++PS +SS  GL+   G+PEALTLARWIC SY        
Sbjct: 660 AMARQYVRSVMASVQRVAMAIAPSRLSSHMGLKPLPGSPEALTLARWICRSYRFDLDQLT 719

Query: 681 -RCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLV 737
            R + G +LL+  S+G +++LK LW+H+DA+MCCSLK  A PVFTFANQAGLDMLETTLV
Sbjct: 720 SRIHTGGELLRVDSQGGDAVLKLLWNHSDAIMCCSLKTNASPVFTFANQAGLDMLETTLV 779

Query: 738 ALQDITLEKIFDDHGRKALFAEFPQIMQQ------GFACLQGGICLSSMGRPVSYERAVA 791
           ALQDI L+KI D+ GRK L +EF +IMQQ      GFA L  GIC SSMGRPVSYE+A+A
Sbjct: 780 ALQDIMLDKILDEAGRKILCSEFSKIMQQVIMMHHGFAYLPAGICTSSMGRPVSYEQAIA 839

Query: 792 WKVLNEEETAHCICFMFINWSFV 814
           WKVLN+E++ HC+ FMFINWSFV
Sbjct: 840 WKVLNDEDSNHCLAFMFINWSFV 862


>gi|115454289|ref|NP_001050745.1| Os03g0640800 [Oryza sativa Japonica Group]
 gi|75119691|sp|Q6AST1.1|HOX32_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX32; AltName:
           Full=HD-ZIP protein HOX32; AltName: Full=Homeodomain
           transcription factor HOX32; AltName: Full=OsHox32
 gi|50881435|gb|AAT85280.1| homeobox leucine-zipper protein, putative [Oryza sativa Japonica
           Group]
 gi|108710033|gb|ABF97828.1| class III HD-Zip protein 4, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113549216|dbj|BAF12659.1| Os03g0640800 [Oryza sativa Japonica Group]
 gi|215737063|dbj|BAG95992.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 859

 Score = 1169 bits (3025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 568/839 (67%), Positives = 675/839 (80%), Gaps = 34/839 (4%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
           G    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 23  GGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQ 82

Query: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA 127
           NRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS+LVYENGY RQ   + ++A
Sbjct: 83  NRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQLHNPSVA 142

Query: 128 TKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           T DTSCESVVTSGQHH         P RDA+ PAGLL+IAEETL EFLSKATGTAV+WVQ
Sbjct: 143 TTDTSCESVVTSGQHHQQQNPAATRPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQ 202

Query: 183 MPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------------- 228
           M GMKPGPDS+GI+A+SH CSGVAARACGLV LEPT+VAEILKDRP              
Sbjct: 203 MVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDVLHV 262

Query: 229 ----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPP 278
                G  I       YA TTLA  RDFW+LRYTS LEDGSLV+CERSL     GP+ P 
Sbjct: 263 IPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQSTGGPSGPN 322

Query: 279 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA 338
             +FVRAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYES  +LAQK T+A
Sbjct: 323 TPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIA 382

Query: 339 ALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD 398
           ALR +RQ+A E +     G GR+PA LR  SQRLSRGFN+AVNGF D+GW++M +DG +D
Sbjct: 383 ALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAED 442

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 458
           VT+  NSSP+KL+G +++ +  F A+   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD
Sbjct: 443 VTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWAD 502

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA 517
             +D YSAAA++  P ++PG R G F GSQVILPLAHT+EHEEF+EVI+LEG     ++ 
Sbjct: 503 PGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEV 562

Query: 518 IMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSP 577
           ++ RDM+LLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD   +  S 
Sbjct: 563 VLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDGKTDAPSA 622

Query: 578 NRTLDLASALEIGPAGN-RATNNYSTNSTC-MRSVMTIAFEFAFESHMQEHVATMARQYV 635
            RTLDLAS LE+G  G  RA+++  T+STC  RSV+TIAF+F++E+H++E VA MARQYV
Sbjct: 623 TRTLDLASTLEVGSGGTTRASSD--TSSTCNTRSVLTIAFQFSYENHLRESVAAMARQYV 680

Query: 636 RSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEG 695
           R++++SVQRVA+A++PS +  Q   + P G+PEA TLARWI  SYR + G DLL++ S+ 
Sbjct: 681 RTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHTGADLLRTDSQS 740

Query: 696 SESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKA 755
           ++S LK +W H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKA
Sbjct: 741 TDSSLKAMWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKA 800

Query: 756 LFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           L  EFP+IMQQGFA L GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FMF+NWSFV
Sbjct: 801 LCTEFPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 859


>gi|187609448|sp|A2XK30.1|HOX32_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX32; AltName:
           Full=HD-ZIP protein HOX32; AltName: Full=Homeodomain
           transcription factor HOX32; AltName: Full=OsHox32
 gi|125545051|gb|EAY91190.1| hypothetical protein OsI_12798 [Oryza sativa Indica Group]
          Length = 859

 Score = 1168 bits (3021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 568/839 (67%), Positives = 674/839 (80%), Gaps = 34/839 (4%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
           G    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 23  GGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQ 82

Query: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA 127
           NRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS+LVYENGY RQ   + ++A
Sbjct: 83  NRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQLHNPSVA 142

Query: 128 TKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           T DTSCESVVTSGQHH         P RDA+ PAGLL+IAEETL EFLSKATGTAV+WVQ
Sbjct: 143 TTDTSCESVVTSGQHHQQQNPAATRPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQ 202

Query: 183 MPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------------- 228
           M GMKPGPDS+GI+A+SH CSGVAARACGLV LEPT+VAEILKDRP              
Sbjct: 203 MVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDVLHV 262

Query: 229 ----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPP 278
                G  I       YA TTLA  RDFW+LRYTS LEDGSLV+CERSL     GP+ P 
Sbjct: 263 IPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQSTGGPSGPN 322

Query: 279 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA 338
             +FVRAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYES  +LAQK T+A
Sbjct: 323 TPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIA 382

Query: 339 ALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD 398
           ALR +RQ+A E +     G GR+PA LR  SQRLSRGFN+AVNGF D+GW++M +DG +D
Sbjct: 383 ALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAED 442

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 458
           VT+  NSSP+KL+G +++ +  F A+   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD
Sbjct: 443 VTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWAD 502

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA 517
             +D YSAAA++  P ++PG R G F GSQVILPLAHT+EHEEF+EVI+LEG     ++ 
Sbjct: 503 PGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEV 562

Query: 518 IMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSP 577
           ++ RDM+LLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD   +  S 
Sbjct: 563 VLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDGKTDAPSA 622

Query: 578 NRTLDLASALEIGPAGN-RATNNYSTNSTC-MRSVMTIAFEFAFESHMQEHVATMARQYV 635
            RTLDLAS LE+G  G  RA+++  T+STC  RSV+TIAF+F++E+H++E VA MARQYV
Sbjct: 623 TRTLDLASTLEVGSGGTTRASSD--TSSTCNTRSVLTIAFQFSYENHLRESVAAMARQYV 680

Query: 636 RSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEG 695
           R++++SVQRVA+A++PS +  Q   + P G+PEA TLARWI  SYR + G DLL++ S+ 
Sbjct: 681 RTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHTGADLLRTDSQS 740

Query: 696 SESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKA 755
            +S LK +W H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKA
Sbjct: 741 MDSSLKAMWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKA 800

Query: 756 LFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           L  EFP+IMQQGFA L GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FMF+NWSFV
Sbjct: 801 LCTEFPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 859


>gi|357120582|ref|XP_003562005.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Brachypodium
           distachyon]
          Length = 861

 Score = 1166 bits (3016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 561/837 (67%), Positives = 673/837 (80%), Gaps = 31/837 (3%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
           G    +D GKYVRYTPEQV+ALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 26  GGAPQVDTGKYVRYTPEQVDALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQ 85

Query: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA 127
           NRRCREKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVS+LVYENGY R H  + ++A
Sbjct: 86  NRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVYENGYMRTHLSNPSVA 145

Query: 128 TKDTSCESVVTSGQHHLTPQ----HPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           T DTSCESVVTSGQH          P RDA+ PAGLL+IAEETL EFLSKATGTAV+WVQ
Sbjct: 146 TTDTSCESVVTSGQHQQQQNPAVPRPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQ 205

Query: 183 MPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------------- 228
           M GMKPGPDS+GI+A+SH CSGVAARACGLV LEPT+VAEILKDRP              
Sbjct: 206 MVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDVLQI 265

Query: 229 ----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPP 278
                G  I       YA TTLA  RDFW+LRYTS LEDGSLV+CERSL     GP+ P 
Sbjct: 266 IPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQATGGPSGPN 325

Query: 279 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA 338
             +FVRAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYES  +LAQK T+A
Sbjct: 326 TPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIA 385

Query: 339 ALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD 398
           ALR +RQ+A E +     G GR+PA LR  SQRLSRGFN+AVNGF D+GW++M +DG +D
Sbjct: 386 ALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFLDDGWSLMSSDGAED 445

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 458
           VT+ +NSSP+KL+G +++ +  F A+   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD
Sbjct: 446 VTIAINSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWAD 505

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA 517
             +D YSAAA++  P ++PG R   F GSQVILPLAHT+EHEEF+EVI+LEG     ++ 
Sbjct: 506 PGVDAYSAAALRASPYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEV 565

Query: 518 IMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSP 577
           ++ RDM+LLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD+  +  S 
Sbjct: 566 VLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDAPSA 625

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
            RTLDLAS LE+G  G RA ++  + S   RSV+TIAF+F++E+H++E VA+MARQYVR+
Sbjct: 626 TRTLDLASTLEVGSGGTRAASDAPSTSN-TRSVLTIAFQFSYENHLRESVASMARQYVRT 684

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
           +++SVQRVA+A++PS +  Q  ++ P G+PEA TLARWI  SYR + G +LL + S+ ++
Sbjct: 685 VVASVQRVAMAIAPSRLGGQIEMKNPPGSPEAHTLARWIGKSYRFHTGAELLCTDSQSAD 744

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
           + LK LW H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKAL 
Sbjct: 745 ASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALC 804

Query: 758 AEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +EFP+IMQQGFA L GG+C+SSMGRPVSYE+AVAWKVL+E++T HC+ FMF+NWSFV
Sbjct: 805 SEFPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSEDDTPHCLAFMFVNWSFV 861


>gi|326505494|dbj|BAJ95418.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 867

 Score = 1164 bits (3011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/833 (67%), Positives = 672/833 (80%), Gaps = 33/833 (3%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D GKYVRYTPEQV+ALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 37  VDTGKYVRYTPEQVDALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 96

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVS+LVYENGY R H  + ++AT DTS
Sbjct: 97  EKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVYENGYMRTHLSNPSVATTDTS 156

Query: 133 CESVVTSGQHH-----LTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 186
           CESVVTSGQH      + P+ P RDA+ PAGLL+IAEETL EFLSKATGTAV+WVQM GM
Sbjct: 157 CESVVTSGQHQQQQNAVVPR-PQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMVGM 215

Query: 187 KPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------ 228
           KPGPDS+GI+A+SH CSGVAARACGLV LEPT+VAEILKDRP                  
Sbjct: 216 KPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDVLQIIPTG 275

Query: 229 RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHF 282
            G  I       YA TTLA  RDFW+LRYTS LEDGSLV+CERSL     GP+ P   +F
Sbjct: 276 NGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQATGGPSGPNTPNF 335

Query: 283 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ 342
           VRAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYES  +LAQK T+AALR 
Sbjct: 336 VRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALRH 395

Query: 343 LRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           +RQ+A E +     G GR+PA LR  SQRLSRGFN+AVNGF D+GW++M +DG +DVT+ 
Sbjct: 396 IRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFLDDGWSLMSSDGAEDVTIA 455

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNID 462
           +NSSP+KL G +++ +  F A+   VLCAKASMLLQNVPPA+L+RFLREHRSEWAD  +D
Sbjct: 456 INSSPNKLAGTHVNPSQMFSAIGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADPGVD 515

Query: 463 VYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPR 521
            YSAAA++  P ++PG R   F GSQVILPLAHT+EHEEF+EVI+LEG     ++ ++ R
Sbjct: 516 AYSAAALRASPYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSR 575

Query: 522 DMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTL 581
           DM+LLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD+  +  S  RTL
Sbjct: 576 DMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDAPSATRTL 635

Query: 582 DLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISS 641
           DLAS LE+GP G RA ++ S+ S   RSV+TIAF+F++E+H++E VA MARQYVR++++S
Sbjct: 636 DLASTLEVGPGGTRAPSDASSTSN-TRSVLTIAFQFSYENHLRESVAAMARQYVRTVVAS 694

Query: 642 VQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILK 701
           VQRVA+A++PS    Q  ++ P G+PEA TLARWI  SYR + G +LL + S+ +++ LK
Sbjct: 695 VQRVAMAIAPSRPGGQIEMKNPPGSPEAHTLARWIGRSYRFHTGAELLCTESQSADASLK 754

Query: 702 NLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFP 761
            LW H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKAL +EFP
Sbjct: 755 ALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCSEFP 814

Query: 762 QIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +IMQQGFA L GG+C+SSMGRPVSYE+AVAWKVL +++  HC+ FMF+NWSFV
Sbjct: 815 KIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLGDDDAPHCLAFMFVNWSFV 867


>gi|242051699|ref|XP_002454995.1| hypothetical protein SORBIDRAFT_03g002660 [Sorghum bicolor]
 gi|241926970|gb|EES00115.1| hypothetical protein SORBIDRAFT_03g002660 [Sorghum bicolor]
          Length = 844

 Score = 1162 bits (3006), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 566/831 (68%), Positives = 675/831 (81%), Gaps = 35/831 (4%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+R+CP+L++++PKQIKVWFQNRRCREKQR
Sbjct: 16  KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRDCPVLASVDPKQIKVWFQNRRCREKQR 75

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ-STTLATKDTSCES 135
           KE+SRLQA+NRKLTAMNKLLMEENDRLQKQVSQLVYENGY+RQ TQ S  LAT DTSCES
Sbjct: 76  KESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYENGYYRQQTQQSAGLATTDTSCES 135

Query: 136 VVTSGQHHLTPQHPP---RDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDS 192
           VVTSG  ++    P    RDA PAGL+SIAEETLTEFLSKATGTAVEWVQMPGMKPGPDS
Sbjct: 136 VVTSGHQNVAAAAPQAQPRDAGPAGLMSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDS 195

Query: 193 VGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR----------------PRGS----- 231
           +GI+AISHGC+GVAARACGLVG+EP +VAE+LKDR                P G+     
Sbjct: 196 IGIIAISHGCAGVAARACGLVGMEPAKVAEVLKDRLLWLRDCRSMEVVNVLPAGNNGTIE 255

Query: 232 ---AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
                LYA TTLAPARDFWLLRYTS+L+DGSLVVCERSL   Q GP+MP VQ F+R EML
Sbjct: 256 LLYLQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERSLSTKQGGPSMPLVQPFIRGEML 315

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQ 348
           PSG+LIRP +GGGS+IHIVDH+DLEPWSVPEV+RPLYESS ++AQK +MAALR LRQ+A 
Sbjct: 316 PSGFLIRPSDGGGSVIHIVDHIDLEPWSVPEVVRPLYESSAMVAQKMSMAALRYLRQVAH 375

Query: 349 EVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           E T S + GWGR+PAALRALSQ+L+RGFNEA+NG  D+GW+V+ +DG+DDV + VNSSP 
Sbjct: 376 EDTHSVITGWGRQPAALRALSQKLTRGFNEALNGLADDGWSVVESDGVDDVCISVNSSPS 435

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAA 468
           K++  N +F NG P VS++VLCAKASMLLQ+V P  LLRF+RE RS+WAD+N+D + A+A
Sbjct: 436 KVINCNATFNNGLPVVSSSVLCAKASMLLQDVSPPALLRFMREQRSQWADSNLDAFFASA 495

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
           +K   C+LP SR+G F  QVILPLAHT + EEF+EVIKL G   + +DA++ RD+FLLQ+
Sbjct: 496 MKPNFCNLPMSRLGGFSGQVILPLAHTFDPEEFLEVIKL-GNASNYQDALLHRDLFLLQM 554

Query: 529 CSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALE 588
            +G+DEN VGTC+ELIFAPIDASF+DD+PLLPSGFRIIP+D+  +TSSP  TLDLAS LE
Sbjct: 555 YNGVDENMVGTCSELIFAPIDASFSDDSPLLPSGFRIIPIDAPLDTSSPKCTLDLASTLE 614

Query: 589 IGPAGNRATNNYSTN--STCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVA 646
           +G   +R   +   N  S   ++VMTI F+FAFESH+Q+ VA MARQY+RSII+SVQR+A
Sbjct: 615 VGTPRSRINGSGPGNAASAGSKAVMTIVFQFAFESHLQDSVAAMARQYMRSIIASVQRIA 674

Query: 647 LALSPSNISSQAG--LRTPLGTPEALTLARWICHSYRCYLGVDLLKS-SSEGSESILKNL 703
           LALS S +         TP  +PEA TLARWIC SYR + G +L+KS    G E +LK L
Sbjct: 675 LALSSSRLVPHGSSISHTP-ASPEATTLARWICQSYRFHFGAELIKSGDGSGCEGVLKTL 733

Query: 704 WHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQI 763
           WHH  A++CCSLKALPVFTFANQ+GLDMLETTLVALQDITLEK+FDD GRK L AE P I
Sbjct: 734 WHHASAILCCSLKALPVFTFANQSGLDMLETTLVALQDITLEKVFDDQGRKNLCAELPGI 793

Query: 764 MQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           M+QGF C+  G+C+S +GRPVSYE+A+AWKVL+++  AHCICFMF+NWSFV
Sbjct: 794 MEQGFTCIPSGLCVSGLGRPVSYEKALAWKVLDDDSGAHCICFMFVNWSFV 844


>gi|224056521|ref|XP_002298892.1| predicted protein [Populus trichocarpa]
 gi|60327627|gb|AAX19053.1| class III HD-Zip protein 4 [Populus trichocarpa]
 gi|222846150|gb|EEE83697.1| predicted protein [Populus trichocarpa]
          Length = 844

 Score = 1159 bits (2999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 572/846 (67%), Positives = 669/846 (79%), Gaps = 34/846 (4%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MA+S    K   +D+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPK
Sbjct: 1   MALSIH-SKDKHMDSSKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPK 59

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LVYENG+ RQ 
Sbjct: 60  QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGFMRQQ 119

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPP----RDAS-PAGLLSIAEETLTEFLSKATG 175
            Q+ +  T D SCESVV SGQH       P    RDA+ PAGLL+IAEETL EFLSKATG
Sbjct: 120 IQTASATTTDNSCESVVMSGQHQQQQNPTPQQPQRDANNPAGLLAIAEETLAEFLSKATG 179

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPR------ 229
           TAV+WVQM GMKPGPDS+GIVA+S  CSGVAARACGLV LEPT+VAEILKDRP       
Sbjct: 180 TAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCR 239

Query: 230 ------------GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  I       YA TTLA ARDFW LRYT+ LEDGSLV+CERSL +  
Sbjct: 240 CLDILSVIPTGSGGTIELIYMQTYAPTTLAAARDFWTLRYTTTLEDGSLVICERSLTSST 299

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GPT PP   F+RAEMLPSGYLIRPCEG GSIIHIVDH+DL+ WSVPEVLRPLYESS +L
Sbjct: 300 GGPTGPPPSSFIRAEMLPSGYLIRPCEGSGSIIHIVDHVDLDVWSVPEVLRPLYESSKIL 359

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQK TMAALR +RQ+AQE +     G GR+PA LR  SQRL RGFN+AVNGFTD+GW+++
Sbjct: 360 AQKMTMAALRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFTDDGWSLL 419

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           G+DG DDVT+++NSSP+K +G   + A+ FP     VLCAKASMLLQNVPPA+L+RFLRE
Sbjct: 420 GSDGGDDVTIVINSSPNKFLGSQYN-ASMFPTFGGGVLCAKASMLLQNVPPALLVRFLRE 478

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGV 510
           HRSEWAD  +D YSAA +K  P ++P +R G F  SQVILPLAHT+EHEEF+EV++LEG 
Sbjct: 479 HRSEWADYGVDAYSAACLKASPYAVPCARPGGFPSSQVILPLAHTMEHEEFLEVVRLEGH 538

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
             SPED  + RDM+LLQLCSG+DENAVG CA+L+FAPID SFADDAPLL SGFR+IPLD 
Sbjct: 539 AFSPEDVALARDMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAPLLSSGFRVIPLDP 598

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
             +  +  RTLDLAS LE+GP G R  +   TNS  +RSV+TIAF+F+FE+HM+++VA M
Sbjct: 599 KTDAPATTRTLDLASTLEVGPGGTRPASEADTNSYNLRSVLTIAFQFSFENHMRDNVAAM 658

Query: 631 ARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLK 690
           ARQYVR ++ SVQRVA+A++PS +SS  G +T  G+PEALTLA+WIC SYR + G +L +
Sbjct: 659 ARQYVRGVVGSVQRVAMAIAPSRLSSNVGPKTLPGSPEALTLAQWICRSYRIHTGGELFR 718

Query: 691 SSSEGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIF 748
             S+  +++LK LWHH+DA+MCCSLK  A PVFTFANQAGLDMLETTLVALQDI L+KI 
Sbjct: 719 VESQAGDALLKQLWHHSDAIMCCSLKTNASPVFTFANQAGLDMLETTLVALQDIMLDKIL 778

Query: 749 DDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMF 808
           D+ GRK L +EF +I QQGFA L  GIC+SSMGRPVSYE+AVAWKVLN++++ HC+ FMF
Sbjct: 779 DEAGRKILCSEFSKITQQGFAYLPAGICVSSMGRPVSYEQAVAWKVLNDDDSNHCLAFMF 838

Query: 809 INWSFV 814
           +NWSFV
Sbjct: 839 MNWSFV 844


>gi|242033571|ref|XP_002464180.1| hypothetical protein SORBIDRAFT_01g013710 [Sorghum bicolor]
 gi|241918034|gb|EER91178.1| hypothetical protein SORBIDRAFT_01g013710 [Sorghum bicolor]
          Length = 854

 Score = 1157 bits (2993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/839 (67%), Positives = 673/839 (80%), Gaps = 34/839 (4%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
           G    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 18  GGAPQVDTGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQ 77

Query: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA 127
           NRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS+LVYENGY RQ   + + A
Sbjct: 78  NRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQLHNPSAA 137

Query: 128 TKDTSCESVVTSGQHHLTPQ----HPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           T DTSCESVVTSGQHH         P RDA+ PAGLL+IAEETL EFLSKATGTAV+WVQ
Sbjct: 138 TTDTSCESVVTSGQHHQQQNPAAPRPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQ 197

Query: 183 MPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------------- 228
           M GMKPGPDS+GI+A+SH CSGVAARACGLV LEPT+VAEILKDRP              
Sbjct: 198 MVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDILHV 257

Query: 229 ----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPP 278
                G  I       YA TTLA  RDFW LRYTS LEDGSLV+CERSL     GP+ P 
Sbjct: 258 IPTGNGGTIELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPN 317

Query: 279 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA 338
             +FVRAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYES  +LAQKTT+A
Sbjct: 318 TPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKTTIA 377

Query: 339 ALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD 398
           ALR +RQ+A E +     G GR+PA LR  SQRLSRGFN+AVNGF D+GW++M +DG +D
Sbjct: 378 ALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAED 437

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 458
           VT+ +NSSP+KL+G +++ +  F  +   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD
Sbjct: 438 VTIAINSSPNKLIGPHVNSSQLFTTIGGGILCAKASMLLQNVPPALLVRFLREHRSEWAD 497

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA 517
             +D YSAAA++  P ++PG R   F GSQVILPLAHT+EHEEF+EVI+LEG     ++ 
Sbjct: 498 PGVDAYSAAALRASPYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEV 557

Query: 518 IMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSP 577
           ++ RDM+LLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD+  +  S 
Sbjct: 558 VLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDPPSG 617

Query: 578 NRTLDLASALEIGPAGN-RATNNYSTNSTC-MRSVMTIAFEFAFESHMQEHVATMARQYV 635
            RTLDLAS LE+G  G  RA+++ S  STC  RSV+TIAF+F++E+H++E VA MARQYV
Sbjct: 618 TRTLDLASTLEVGSGGTTRASSDAS--STCNTRSVLTIAFQFSYENHLRESVAAMARQYV 675

Query: 636 RSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEG 695
           R++++SVQRVA+A++PS +  Q  ++   G+PEA TLARWI  SYR + G +LL++ ++ 
Sbjct: 676 RTVVASVQRVAMAIAPSRLGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQC 735

Query: 696 SESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKA 755
           +++ LK LW H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKA
Sbjct: 736 TDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKA 795

Query: 756 LFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           L  E+P+IMQQGFA L GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FMF+NWSFV
Sbjct: 796 LCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 854


>gi|357126818|ref|XP_003565084.1| PREDICTED: homeobox-leucine zipper protein HOX29-like isoform 1
           [Brachypodium distachyon]
          Length = 839

 Score = 1155 bits (2988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 558/831 (67%), Positives = 672/831 (80%), Gaps = 29/831 (3%)

Query: 12  SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRC 71
           ++D  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+REC +L+ ++PKQIKVWFQNRRC
Sbjct: 10  AMDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLAAVDPKQIKVWFQNRRC 69

Query: 72  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ-HTQSTTLATKD 130
           REKQR+E+ RLQ++NRKLTAMNKLLMEENDRLQKQVS LVYENGY+RQ HT S  LAT D
Sbjct: 70  REKQRRESGRLQSLNRKLTAMNKLLMEENDRLQKQVSSLVYENGYYRQQHTHSAGLATTD 129

Query: 131 TSCESVVTSGQH-HLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPG 189
           TSCESVVTSGQ  ++    PPRDASPAGL+SIAEETLTEFLSKATGTAVEWVQMPGMKPG
Sbjct: 130 TSCESVVTSGQQQNVVVPPPPRDASPAGLMSIAEETLTEFLSKATGTAVEWVQMPGMKPG 189

Query: 190 PDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------RGSAI---------- 233
           PDS+GI+AISHGC+GVAARACGLVG+EP +VAEILKDRP      R   +          
Sbjct: 190 PDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPLWLRDCRSMEVVNVLPAGSNG 249

Query: 234 --------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRA 285
                   LYA TTLAPARDFWLLRYTS+L+DGSLVVCERSL + Q GP+MP VQ F+R 
Sbjct: 250 TIELLYMQLYAQTTLAPARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRG 309

Query: 286 EMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ 345
           EMLPSG+LIRP +GGGS+IHIVDH+DLEP SVPEV+RPLYESS ++AQK +MAALR LRQ
Sbjct: 310 EMLPSGFLIRPSDGGGSVIHIVDHLDLEPRSVPEVVRPLYESSAIVAQKMSMAALRYLRQ 369

Query: 346 MAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNS 405
           +A E T S + GWGR+PAALRALSQ+L+RGFNEA+ G TD+GW+ + +DG+DDV + VNS
Sbjct: 370 LAHEDTHSIITGWGRQPAALRALSQKLTRGFNEALCGLTDDGWSAIESDGVDDVCISVNS 429

Query: 406 SPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYS 465
           S +K++  N +F +G P VS  VLCAKASMLLQ+V P  LL+FL EHRS+WAD+ +D + 
Sbjct: 430 SLNKVISCNATFGDGLPIVSAGVLCAKASMLLQDVSPPSLLQFLHEHRSQWADSTLDAFF 489

Query: 466 AAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFL 525
           A+A+K   C+LP SR+G F  QVILPLAHT + EEF+EVIK+ G   + +D +M RD+FL
Sbjct: 490 ASALKPNFCNLPMSRLGGFSGQVILPLAHTFDPEEFLEVIKI-GNASNYQDTLMHRDLFL 548

Query: 526 LQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLAS 585
           LQ+ +G+DEN VG+C+ELIFAPIDASF+DD+PLLPSGFRIIP+DS  +TSSPN TLDLAS
Sbjct: 549 LQMYNGVDENTVGSCSELIFAPIDASFSDDSPLLPSGFRIIPIDSPLDTSSPNCTLDLAS 608

Query: 586 ALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRV 645
            LE+G    R T + S N   M++VMTIAF+FAFESH+Q+ VA MA+QY+RSIISSVQR+
Sbjct: 609 TLEVGTPRGRMTGSGSVNGAGMKAVMTIAFQFAFESHLQDSVAAMAQQYMRSIISSVQRI 668

Query: 646 ALALSPSNISSQAGLR-TPLGTPEALTLARWICHSYRCYLGVDLLKS-SSEGSESILKNL 703
           ALALS S + S    R  P  TPEA TL+RWI  SYR + G +L+KS  ++G ES+LK+L
Sbjct: 669 ALALSSSRLVSHGSPRLLPHVTPEAATLSRWIVQSYRFHFGAELIKSGDADGGESVLKSL 728

Query: 704 WHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQI 763
           WHHT A++CCSLKA+PV TFANQ+GLDMLETTL ALQD+ LEKI  D   K+L AE P I
Sbjct: 729 WHHTSAILCCSLKAMPVLTFANQSGLDMLETTLAALQDMALEKILGDQAGKSLLAELPGI 788

Query: 764 MQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           M+QGFAC+QGG+C S +GRP +YE+AVAWKVL++   AHC+CF F+ WSFV
Sbjct: 789 MEQGFACVQGGVCASRLGRPAAYEKAVAWKVLDDGGAAHCVCFAFLGWSFV 839


>gi|297746262|emb|CBI16318.3| unnamed protein product [Vitis vinifera]
          Length = 844

 Score = 1139 bits (2947), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/833 (68%), Positives = 657/833 (78%), Gaps = 41/833 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           LD+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 22  LDSGKYVRYTAEQVEALERVYLECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY RQ  Q+ + AT D S
Sbjct: 82  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMRQQLQTASAATTDAS 141

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CESVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 142 CESVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 195

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           SVGI AISH CSGVAARACGLV LEP+++AEILKDRP                   G  +
Sbjct: 196 SVGIFAISHSCSGVAARACGLVSLEPSKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTV 255

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 +YA TTLAPARDFW LRYT+ L++GSLVVCERSL     GP       FVRAEM
Sbjct: 256 ELLYTQIYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGSGAGPNTAAAAQFVRAEM 315

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPCEGGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQK T+AALR +RQ+A
Sbjct: 316 LPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRVVAQKMTIAALRYIRQIA 375

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V G GR+PA LR  SQRLSRGFN+A+NGF D+GW++M  DG +DV + VNS+ 
Sbjct: 376 QETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSLMSCDGAEDVIIAVNSTK 435

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
           +     N + +   P     VLCAKASMLLQNVPPA+L+RFLREHRSEWAD ++D YSAA
Sbjct: 436 NLNTTSNPANSLSLPG---GVLCAKASMLLQNVPPAVLVRFLREHRSEWADFSVDAYSAA 492

Query: 468 AIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
           ++K  P S PG R   F GSQ+I+PL HTIEHEE +EVI+LEG   + EDA M RD+ LL
Sbjct: 493 SLKASPYSYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAHEDAFMSRDIHLL 552

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSG----KETSSPNRTLD 582
           Q+CSG+DENAVG C+EL+FAPID  F DDAPLLPSGFRIIPLDS     +ET + +RTLD
Sbjct: 553 QICSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSKSGDTQETLTTHRTLD 612

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           L S+LE+GPA N+A  + S++    RSV+TIAF+F FES++Q++VATMARQYVRS+ISSV
Sbjct: 613 LTSSLEVGPATNQAAGD-SSSCYNTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSV 671

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKN 702
           QRVA+A+SPS +    G +   G+PEALTLA WIC SY  ++G +LL+S S G +S+LKN
Sbjct: 672 QRVAMAISPSGLGPAVGPKLSAGSPEALTLAHWICQSYSYHVGAELLRSDSVGGDSVLKN 731

Query: 703 LWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQ 762
           LWHH DA++CCSLK+LPV  FANQAGLDMLETTLVALQDI+L+KIFD+ GRK L A+F +
Sbjct: 732 LWHHQDAILCCSLKSLPVLIFANQAGLDMLETTLVALQDISLDKIFDESGRKGLCADFAK 791

Query: 763 IMQQGFACLQGGICLSSMGRPVSYERAVAWKVL-NEEETAHCICFMFINWSFV 814
           IMQQGFA L  GIC+S+MGR VSYE+A+AWKVL  EE T HC+ F FINWSFV
Sbjct: 792 IMQQGFAYLPAGICMSTMGRHVSYEQAIAWKVLAAEENTVHCLAFSFINWSFV 844


>gi|45479746|gb|AAS66760.1| PHAVOLUTA-like HD-ZIPIII protein [Nicotiana sylvestris]
          Length = 843

 Score = 1139 bits (2947), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 564/841 (67%), Positives = 657/841 (78%), Gaps = 32/841 (3%)

Query: 5   CKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 64
           C + K   +DN KYVRYTPEQVEALER+Y ECPKP+S+RRQQLIRECPILSNIEPKQIKV
Sbjct: 4   CLNNKNQIMDNSKYVRYTPEQVEALERVYAECPKPTSLRRQQLIRECPILSNIEPKQIKV 63

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST 124
           WFQNRRCREKQRKEASRL  VNRKL+AMNKLLMEENDRLQKQVSQLVYENGY +Q   + 
Sbjct: 64  WFQNRRCREKQRKEASRLTTVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYMKQQINTV 123

Query: 125 TLATKDTSCESVVTSGQHHL---TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEW 180
           +  T DTSCESVV +GQ      TPQHP RDA+ PAGLL+IAEETL EFL KATGTAV+W
Sbjct: 124 SSTTTDTSCESVVVNGQQQRKNPTPQHPERDANNPAGLLAIAEETLAEFLGKATGTAVDW 183

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQM GMKPGPDS+GIVA+S  CSGVAARACGLV LEPT+VAEILKDRP            
Sbjct: 184 VQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCLNIL 243

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I       YA TTLA ARDFW LRYT+ LEDGSLV+CERSL     GPT 
Sbjct: 244 SVIPTGNGGTIELIYLQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTTATGGPTG 303

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           PP   FVRAEMLPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYESS +LAQKTT
Sbjct: 304 PPATSFVRAEMLPSGYLIRPCEGGGSMIHIVDHIDLDAWSVPEVLRPLYESSKILAQKTT 363

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           +AALR +RQ+AQE +       GR+PA LRALSQRL RGFN+AVNGF D+GWTVM +DG+
Sbjct: 364 VAALRHIRQIAQETSGEIQYTGGRQPAVLRALSQRLCRGFNDAVNGFVDDGWTVMDSDGV 423

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           +DVTV +NSS  K +G   +  +  P     VLCA+ASMLLQNVPPA+L+RFLREHRSEW
Sbjct: 424 EDVTVAINSSSTKFLGSQYNTLSILPTF-GGVLCARASMLLQNVPPALLVRFLREHRSEW 482

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           AD  +D YSAA++K  P ++P +R G F  SQVILPLA T+EHEEF+EV++LEG   SPE
Sbjct: 483 ADYGVDAYSAASLKASPYAVPCARPGGFPSSQVILPLAQTVEHEEFLEVVRLEGPAFSPE 542

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS 575
           D  + RDM+LLQLCSG+DENA G CA+L+FAPID SF DDAPLLPSGFR+IPL+   +  
Sbjct: 543 DIALSRDMYLLQLCSGVDENASGACAQLVFAPIDESFGDDAPLLPSGFRVIPLEPKSDGP 602

Query: 576 SPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYV 635
           +  RTLDLAS LE G  G R       ++   RSV+TIAF+F FESH +++VA MARQYV
Sbjct: 603 AATRTLDLASTLEAGTGGTRPAGEIEASNYNHRSVLTIAFQFTFESHYRDNVAAMARQYV 662

Query: 636 RSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEG 695
           RSI+ SVQRVA+A++PS +SSQ   +   G+PEA+TLARWI  SYR + G DLL+  S+ 
Sbjct: 663 RSIVGSVQRVAMAIAPSRLSSQLTPKPFPGSPEAVTLARWISRSYRVHTGGDLLQVDSQD 722

Query: 696 SESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGR 753
            +++LK LWHH+DA+MCCS+K  A  VFTFANQAGLDMLETTL+ALQDI L+KI D+ GR
Sbjct: 723 GDAVLKQLWHHSDAIMCCSVKMNASAVFTFANQAGLDMLETTLLALQDIMLDKILDEAGR 782

Query: 754 KALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
           K L +EF +IMQQGFA L  GIC+SSMGRPVSYE+AVAWKVLN+E++ HC+ FMFINWSF
Sbjct: 783 KVLLSEFSKIMQQGFAYLPAGICVSSMGRPVSYEQAVAWKVLNDEDSNHCLAFMFINWSF 842

Query: 814 V 814
           V
Sbjct: 843 V 843


>gi|357126820|ref|XP_003565085.1| PREDICTED: homeobox-leucine zipper protein HOX29-like isoform 2
           [Brachypodium distachyon]
          Length = 872

 Score = 1139 bits (2946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 558/864 (64%), Positives = 672/864 (77%), Gaps = 62/864 (7%)

Query: 12  SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRC 71
           ++D  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+REC +L+ ++PKQIKVWFQNRRC
Sbjct: 10  AMDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLAAVDPKQIKVWFQNRRC 69

Query: 72  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ-HTQSTT----- 125
           REKQR+E+ RLQ++NRKLTAMNKLLMEENDRLQKQVS LVYENGY+RQ HT S       
Sbjct: 70  REKQRRESGRLQSLNRKLTAMNKLLMEENDRLQKQVSSLVYENGYYRQQHTHSVRPSSPP 129

Query: 126 ----------------------------LATKDTSCESVVTSGQH-HLTPQHPPRDASPA 156
                                       LAT DTSCESVVTSGQ  ++    PPRDASPA
Sbjct: 130 PAPAAMMREAHAFVAPPPPPLLLPLQAGLATTDTSCESVVTSGQQQNVVVPPPPRDASPA 189

Query: 157 GLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLE 216
           GL+SIAEETLTEFLSKATGTAVEWVQMPGMKPGPDS+GI+AISHGC+GVAARACGLVG+E
Sbjct: 190 GLMSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGME 249

Query: 217 PTRVAEILKDRP------RGSAI------------------LYALTTLAPARDFWLLRYT 252
           P +VAEILKDRP      R   +                  LYA TTLAPARDFWLLRYT
Sbjct: 250 PAKVAEILKDRPLWLRDCRSMEVVNVLPAGSNGTIELLYMQLYAQTTLAPARDFWLLRYT 309

Query: 253 SVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDL 312
           S+L+DGSLVVCERSL + Q GP+MP VQ F+R EMLPSG+LIRP +GGGS+IHIVDH+DL
Sbjct: 310 SILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGGGSVIHIVDHLDL 369

Query: 313 EPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRL 372
           EP SVPEV+RPLYESS ++AQK +MAALR LRQ+A E T S + GWGR+PAALRALSQ+L
Sbjct: 370 EPRSVPEVVRPLYESSAIVAQKMSMAALRYLRQLAHEDTHSIITGWGRQPAALRALSQKL 429

Query: 373 SRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAK 432
           +RGFNEA+ G TD+GW+ + +DG+DDV + VNSS +K++  N +F +G P VS  VLCAK
Sbjct: 430 TRGFNEALCGLTDDGWSAIESDGVDDVCISVNSSLNKVISCNATFGDGLPIVSAGVLCAK 489

Query: 433 ASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPL 492
           ASMLLQ+V P  LL+FL EHRS+WAD+ +D + A+A+K   C+LP SR+G F  QVILPL
Sbjct: 490 ASMLLQDVSPPSLLQFLHEHRSQWADSTLDAFFASALKPNFCNLPMSRLGGFSGQVILPL 549

Query: 493 AHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASF 552
           AHT + EEF+EVIK+ G   + +D +M RD+FLLQ+ +G+DEN VG+C+ELIFAPIDASF
Sbjct: 550 AHTFDPEEFLEVIKI-GNASNYQDTLMHRDLFLLQMYNGVDENTVGSCSELIFAPIDASF 608

Query: 553 ADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMT 612
           +DD+PLLPSGFRIIP+DS  +TSSPN TLDLAS LE+G    R T + S N   M++VMT
Sbjct: 609 SDDSPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEVGTPRGRMTGSGSVNGAGMKAVMT 668

Query: 613 IAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLR-TPLGTPEALT 671
           IAF+FAFESH+Q+ VA MA+QY+RSIISSVQR+ALALS S + S    R  P  TPEA T
Sbjct: 669 IAFQFAFESHLQDSVAAMAQQYMRSIISSVQRIALALSSSRLVSHGSPRLLPHVTPEAAT 728

Query: 672 LARWICHSYRCYLGVDLLKS-SSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLD 730
           L+RWI  SYR + G +L+KS  ++G ES+LK+LWHHT A++CCSLKA+PV TFANQ+GLD
Sbjct: 729 LSRWIVQSYRFHFGAELIKSGDADGGESVLKSLWHHTSAILCCSLKAMPVLTFANQSGLD 788

Query: 731 MLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAV 790
           MLETTL ALQD+ LEKI  D   K+L AE P IM+QGFAC+QGG+C S +GRP +YE+AV
Sbjct: 789 MLETTLAALQDMALEKILGDQAGKSLLAELPGIMEQGFACVQGGVCASRLGRPAAYEKAV 848

Query: 791 AWKVLNEEETAHCICFMFINWSFV 814
           AWKVL++   AHC+CF F+ WSFV
Sbjct: 849 AWKVLDDGGAAHCVCFAFLGWSFV 872


>gi|224113651|ref|XP_002332526.1| predicted protein [Populus trichocarpa]
 gi|60327625|gb|AAX19052.1| class III HD-Zip protein 3 [Populus trichocarpa]
 gi|222832638|gb|EEE71115.1| predicted protein [Populus trichocarpa]
          Length = 843

 Score = 1138 bits (2944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/848 (66%), Positives = 662/848 (78%), Gaps = 41/848 (4%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           ++M  KD +   +D+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPIL NIEPK
Sbjct: 3   LSMHSKDKQ---MDSSKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILCNIEPK 59

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVS LVYENGY RQ 
Sbjct: 60  QIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMRQQ 119

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPP----RDAS-PAGLLSIAEETLTEFLSKATG 175
            Q+ +    D SCESVV SGQH       P    RDA+ PAGLL+IAEETL EFLSKATG
Sbjct: 120 IQTASATATDNSCESVVMSGQHQQQQNPTPQQPQRDANNPAGLLTIAEETLAEFLSKATG 179

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPR------ 229
           TAV+WVQM GMKPGPDS+GIVA+S  CSGVAARACGLV LEP +VAEILKDRP       
Sbjct: 180 TAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPIKVAEILKDRPSWFRDCR 239

Query: 230 ------------GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  I       YA TTLA ARDFW LRYT+ LEDGSLV+CERSL +  
Sbjct: 240 CLDIMSVIPTGSGGTIELIYMQTYAPTTLAAARDFWTLRYTTTLEDGSLVICERSLTSST 299

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GPT PP   FVRA+MLPSGYLIRPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS +L
Sbjct: 300 GGPTGPPSSSFVRADMLPSGYLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKIL 359

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQK TMAAL+ +RQ+AQE +     G GR+PA LR  SQRL RGFN+AVNGFTD GW+++
Sbjct: 360 AQKMTMAALQYIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFTDSGWSLL 419

Query: 392 GNDGMDDVTVLVNSSPDKLMG--LNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFL 449
             DG DDVT+++NSSP K +G   N S +  F      VLCAKASMLLQNVPPA+L+RFL
Sbjct: 420 DGDGGDDVTIVINSSPTKFLGSQYNASISPTF----GGVLCAKASMLLQNVPPALLVRFL 475

Query: 450 REHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLE 508
           REHRSEWAD  +DVYSAA +K  P ++P +R G F  SQVILPLAHT+EHEEF+EV++LE
Sbjct: 476 REHRSEWADYGVDVYSAACLKASPYAVPCTRPGGFPSSQVILPLAHTVEHEEFLEVVRLE 535

Query: 509 GVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPL 568
           G   SPED  + +DM+LLQLCSG+DENA+G CA+L+FAPID SFADDAPLLPSGFR+IPL
Sbjct: 536 GHAFSPEDVALAQDMYLLQLCSGVDENALGACAQLVFAPIDESFADDAPLLPSGFRVIPL 595

Query: 569 DSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVA 628
           D   +  +  RTLDLAS LE+GP G R  +   TNS  +RSV+TIAF+F FE+H +++VA
Sbjct: 596 DPKTDAPAATRTLDLASTLEVGPGGARPASEADTNSYNLRSVLTIAFQFTFENHFRDNVA 655

Query: 629 TMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDL 688
            MARQYVR +++SVQRVA+A+SPS +SS  G ++   +PEALTLARWI  SYR + G +L
Sbjct: 656 AMARQYVRGVVASVQRVAMAISPSRLSSNMGPKSLPVSPEALTLARWIYRSYRIHTGGEL 715

Query: 689 LKSSSEGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEK 746
            +  S+  +++LK LWHH+DA+MCCSLK  A PVFTFANQAGLDMLETTLVALQDI L+K
Sbjct: 716 FRVDSQAGDALLKRLWHHSDAIMCCSLKTNASPVFTFANQAGLDMLETTLVALQDIMLDK 775

Query: 747 IFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICF 806
           I D+ GRK L +EF +IMQQG+A L  GIC+SSMGRPVSYE+A+AWKVLN++ + HC+ F
Sbjct: 776 ILDEAGRKILCSEFSKIMQQGYAYLPAGICVSSMGRPVSYEQAIAWKVLNDDNSNHCLAF 835

Query: 807 MFINWSFV 814
           MFINWSFV
Sbjct: 836 MFINWSFV 843


>gi|356533043|ref|XP_003535078.1| PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine
           max]
          Length = 846

 Score = 1137 bits (2941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 559/847 (65%), Positives = 661/847 (78%), Gaps = 34/847 (4%)

Query: 1   MAMSC-KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           MA+S  KD     +D+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEP
Sbjct: 1   MALSMHKDSANNQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEP 60

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 119
           KQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LVYENGY +Q
Sbjct: 61  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKQ 120

Query: 120 HTQSTTLATK-DTSCESVVTSGQHHLTPQ---HPPRDAS-PAGLLSIAEETLTEFLSKAT 174
              + +  T  D SCESVV SGQ+        HP RDA+ PAGLL+IAEETL EFLSKAT
Sbjct: 121 QIHTASAGTTTDNSCESVVMSGQNQQQNPTPQHPNRDANNPAGLLAIAEETLAEFLSKAT 180

Query: 175 GTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR------- 227
           GTAV+WVQM GMKPGPDS+GIVA+S  CSGVAARACGLV LEPT+VAEILKDR       
Sbjct: 181 GTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRQSWYRDC 240

Query: 228 ---------PRGSA--------ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI 270
                    P G+           YA TTLA ARDFW LRYT+ LEDGSLV+CERSL + 
Sbjct: 241 RCVDVLSIVPTGNGGTIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSS 300

Query: 271 QNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTV 330
             GPT PP   FVRAEMLPSG+L+RPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS  
Sbjct: 301 TGGPTGPPSTTFVRAEMLPSGFLVRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKF 360

Query: 331 LAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTV 390
           LAQK T+AAL+ +RQ+AQE +       GR+PA LR  SQRL RGFN+AVNGF D+GW++
Sbjct: 361 LAQKLTIAALQHIRQIAQESSGEIQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSL 420

Query: 391 MGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR 450
           MG DG++DVT+ +NSSP+K +G N + A+ FPA    VLCAKASMLLQNVPPA+L+RFLR
Sbjct: 421 MGTDGVEDVTIAINSSPNKFLGSNYN-ASMFPAFGGGVLCAKASMLLQNVPPALLVRFLR 479

Query: 451 EHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEG 509
           EHRSEWAD  +D YSAA +K  P ++P +R G F S QVILPLAHTIEHEEF+EV+++EG
Sbjct: 480 EHRSEWADYGVDAYSAACLKASPYAVPCARPGGFPSTQVILPLAHTIEHEEFLEVVRIEG 539

Query: 510 VGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD 569
              SPED  + RDM+LLQLCSG+DENA+G CA+L+FAPID SFADDA LLPSGFR+IPLD
Sbjct: 540 HAFSPEDVALARDMYLLQLCSGVDENAIGACAQLVFAPIDESFADDALLLPSGFRVIPLD 599

Query: 570 SGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVAT 629
              +  +  RTLDLAS +E+G    R       N   +RSV+TIAF+F FE+H +++VA 
Sbjct: 600 PKSDGPAATRTLDLASTMEVGSGNARPAGEADLNGYNLRSVLTIAFQFTFENHTRDNVAA 659

Query: 630 MARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLL 689
           MARQYVRS++ SVQRVA+A++PS  ++Q G ++  G+PEALTLARWIC SYR + G +L 
Sbjct: 660 MARQYVRSVVGSVQRVAMAIAPSRFNTQLGPKSLSGSPEALTLARWICRSYRVHTGTELF 719

Query: 690 KSSSEGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKI 747
           K+ S   ++ILK LWHH DA++CCS+K  A PVFTF+NQAGLDMLETTLV+LQDI L+K+
Sbjct: 720 KAESTAGDAILKQLWHHPDAIICCSVKTNASPVFTFSNQAGLDMLETTLVSLQDIMLDKV 779

Query: 748 FDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFM 807
            D+ GRK L +EF +IMQQGFA L  GIC+SSM RPVSYE+ VAWKVLN++++ HC+ FM
Sbjct: 780 LDESGRKILCSEFSKIMQQGFASLPAGICVSSMNRPVSYEQVVAWKVLNDDDSNHCLAFM 839

Query: 808 FINWSFV 814
           FINWSFV
Sbjct: 840 FINWSFV 846


>gi|359478353|ref|XP_002285176.2| PREDICTED: homeobox-leucine zipper protein REVOLUTA [Vitis
           vinifera]
          Length = 843

 Score = 1134 bits (2934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/833 (68%), Positives = 657/833 (78%), Gaps = 42/833 (5%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           LD+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 22  LDSGKYVRYTAEQVEALERVYLECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY RQ  Q+ + AT D S
Sbjct: 82  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMRQQLQTVS-ATTDAS 140

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CESVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 141 CESVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 194

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           SVGI AISH CSGVAARACGLV LEP+++AEILKDRP                   G  +
Sbjct: 195 SVGIFAISHSCSGVAARACGLVSLEPSKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTV 254

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 +YA TTLAPARDFW LRYT+ L++GSLVVCERSL     GP       FVRAEM
Sbjct: 255 ELLYTQIYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGSGAGPNTAAAAQFVRAEM 314

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPCEGGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQK T+AALR +RQ+A
Sbjct: 315 LPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRVVAQKMTIAALRYIRQIA 374

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V G GR+PA LR  SQRLSRGFN+A+NGF D+GW++M  DG +DV + VNS+ 
Sbjct: 375 QETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSLMSCDGAEDVIIAVNSTK 434

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
           +     N + +   P     VLCAKASMLLQNVPPA+L+RFLREHRSEWAD ++D YSAA
Sbjct: 435 NLNTTSNPANSLSLPG---GVLCAKASMLLQNVPPAVLVRFLREHRSEWADFSVDAYSAA 491

Query: 468 AIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
           ++K  P S PG R   F GSQ+I+PL HTIEHEE +EVI+LEG   + EDA M RD+ LL
Sbjct: 492 SLKASPYSYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAHEDAFMSRDIHLL 551

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSG----KETSSPNRTLD 582
           Q+CSG+DENAVG C+EL+FAPID  F DDAPLLPSGFRIIPLDS     +ET + +RTLD
Sbjct: 552 QICSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSKSGDTQETLTTHRTLD 611

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           L S+LE+GPA N+A  + S++    RSV+TIAF+F FES++Q++VATMARQYVRS+ISSV
Sbjct: 612 LTSSLEVGPATNQAAGD-SSSCYNTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSV 670

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKN 702
           QRVA+A+SPS +    G +   G+PEALTLA WIC SY  ++G +LL+S S G +S+LKN
Sbjct: 671 QRVAMAISPSGLGPAVGPKLSAGSPEALTLAHWICQSYSYHVGAELLRSDSVGGDSVLKN 730

Query: 703 LWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQ 762
           LWHH DA++CCSLK+LPV  FANQAGLDMLETTLVALQDI+L+KIFD+ GRK L A+F +
Sbjct: 731 LWHHQDAILCCSLKSLPVLIFANQAGLDMLETTLVALQDISLDKIFDESGRKGLCADFAK 790

Query: 763 IMQQGFACLQGGICLSSMGRPVSYERAVAWKVL-NEEETAHCICFMFINWSFV 814
           IMQQGFA L  GIC+S+MGR VSYE+A+AWKVL  EE T HC+ F FINWSFV
Sbjct: 791 IMQQGFAYLPAGICMSTMGRHVSYEQAIAWKVLAAEENTVHCLAFSFINWSFV 843


>gi|356555875|ref|XP_003546255.1| PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine
           max]
          Length = 846

 Score = 1132 bits (2929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 561/847 (66%), Positives = 659/847 (77%), Gaps = 34/847 (4%)

Query: 1   MAMSC-KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           MA+S  KD     +D+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEP
Sbjct: 1   MALSMHKDSANNQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEP 60

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 119
           KQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LVYENGY +Q
Sbjct: 61  KQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKQ 120

Query: 120 HTQSTTLATK-DTSCESVVTSGQHHLTPQ---HPPRDAS-PAGLLSIAEETLTEFLSKAT 174
              + +  T  D SCESVV SGQ+        HP RDA+ PAGLL+IAEETL EFLSKAT
Sbjct: 121 QIHTASAGTTTDNSCESVVMSGQNQQQNPTPQHPNRDANNPAGLLAIAEETLAEFLSKAT 180

Query: 175 GTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR------- 227
           GTAV+WVQM GMKPGPDS+GIVA+S  CSGVAARACGLV LEPT+VAEILKDR       
Sbjct: 181 GTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRQSWYRDC 240

Query: 228 ---------PRGSA--------ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI 270
                    P G+           YA TTLA ARDFW LRYT+ LEDGSLV+CERSL + 
Sbjct: 241 RCVDVLSIVPTGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSS 300

Query: 271 QNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTV 330
             GP  PP   FVRAEMLPSG+LIRPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS +
Sbjct: 301 TGGPAGPPSTTFVRAEMLPSGFLIRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKI 360

Query: 331 LAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTV 390
           LAQK T+AAL+ +RQ+A E +     G GR+PA LR  SQRL RGFN+AVNGF D+GW++
Sbjct: 361 LAQKLTIAALQHIRQIALESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSL 420

Query: 391 MGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR 450
           MG DG++DVT+ +NSSP+K +G N + A+ FPA    VLCAKASMLLQNVPPA+L+RFLR
Sbjct: 421 MGTDGVEDVTIAINSSPNKFLGSNYN-ASMFPAFGGGVLCAKASMLLQNVPPALLVRFLR 479

Query: 451 EHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEG 509
           EHRSEWAD  +D YSAA +K  P ++P +R G F S QVILPLAHTIEHEEF+EV+++EG
Sbjct: 480 EHRSEWADYGVDAYSAACLKASPYAVPCARPGGFPSTQVILPLAHTIEHEEFLEVVRIEG 539

Query: 510 VGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD 569
              SPED  M RDM+LLQLCSG+DE+AVG CA+L+FAPID SFADDA LLPSGFR+IPLD
Sbjct: 540 HAFSPEDVAMARDMYLLQLCSGVDESAVGACAQLVFAPIDESFADDALLLPSGFRVIPLD 599

Query: 570 SGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVAT 629
              +  +P RTLDLAS +E+G    R       N   +RSV+TIAF+F FE+H +++VA 
Sbjct: 600 PKSDGPAPTRTLDLASTMEVGSGNARPAGEADLNGYNLRSVLTIAFQFTFENHTRDNVAA 659

Query: 630 MARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLL 689
           MARQYVRS++ SVQRVA+A++PS +++Q   ++  G+PEALTLARWI  SYR + G +L 
Sbjct: 660 MARQYVRSVVGSVQRVAMAIAPSRLNTQLAPKSLPGSPEALTLARWIFRSYRMHTGTELF 719

Query: 690 KSSSEGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKI 747
           K+ S   ++ILK LWHH DA+MCCS+K  A PVFTFANQAGLDMLETTLVALQDI L+K+
Sbjct: 720 KAESTAGDAILKQLWHHPDAIMCCSVKTNASPVFTFANQAGLDMLETTLVALQDIMLDKV 779

Query: 748 FDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFM 807
            D+  RK L  EF +IMQQGFA L  GIC SSM RPVSYE+AVAWKVLN++++ HC+ FM
Sbjct: 780 LDESSRKILCCEFSKIMQQGFAYLPAGICASSMNRPVSYEQAVAWKVLNDDDSNHCLAFM 839

Query: 808 FINWSFV 814
           F+NWSFV
Sbjct: 840 FMNWSFV 846


>gi|255578153|ref|XP_002529946.1| DNA binding protein, putative [Ricinus communis]
 gi|223530576|gb|EEF32454.1| DNA binding protein, putative [Ricinus communis]
          Length = 842

 Score = 1132 bits (2928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/832 (68%), Positives = 654/832 (78%), Gaps = 42/832 (5%)

Query: 14  DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCRE 73
           D+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCRE
Sbjct: 22  DSGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCRE 81

Query: 74  KQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
           KQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY RQ  Q+ + AT D SC
Sbjct: 82  KQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMRQQLQTASAAT-DASC 140

Query: 134 ESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDS 192
           +SVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPDS
Sbjct: 141 DSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDS 194

Query: 193 VGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI- 233
           VGI AIS  CSGVAARACGLV LEPT++AEILKDRP                   G  I 
Sbjct: 195 VGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIE 254

Query: 234 -----LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
                +YA TTLAPARDFW LRYTS L++GSLVVCERSL     GP       FVRAEML
Sbjct: 255 LVYSQVYAPTTLAPARDFWTLRYTSSLDNGSLVVCERSLSGSGAGPNAAAAAQFVRAEML 314

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQ 348
           PSGYLIRPC+GGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQK T+AALR +RQ+AQ
Sbjct: 315 PSGYLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRFIRQIAQ 374

Query: 349 EVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           E +   V G GR+PA LR  SQRLSRGFN+A+NGF D+GW++M  DG +DV V +NS+  
Sbjct: 375 ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSLMSCDGAEDVIVTINST-- 432

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAA 468
           K +    + AN F A    +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+D YSAA+
Sbjct: 433 KNLSSTSNAANSF-AFLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYSAAS 491

Query: 469 IKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQ 527
           +K G  + PG R   F GSQ+I+PL HTIEHEE +EVI+LEG     EDA + RD+ LLQ
Sbjct: 492 LKAGSYAFPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLVQEDAFVSRDIHLLQ 551

Query: 528 LCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS----SPNRTLDL 583
           +CSG+DENAVG C+EL+FAPID  F DDAPLLPSGFRIIPLDS  + +    + +RTLDL
Sbjct: 552 ICSGIDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSKTKDTQDALTTSRTLDL 611

Query: 584 ASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQ 643
            S+LE+GPA N    + S+ S   RSV+TIAF+F FES++QE+VATMARQYVRS+ISSVQ
Sbjct: 612 TSSLEVGPAANNTAGDASS-SQSTRSVLTIAFQFPFESNLQENVATMARQYVRSVISSVQ 670

Query: 644 RVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNL 703
           RVA+A+SPS +    G +   G+PEALTLA WIC SY  YLG +LL+S S   +S+LK L
Sbjct: 671 RVAMAISPSGLGPAVGPKLSPGSPEALTLAHWICQSYSYYLGAELLRSDSLAGDSVLKQL 730

Query: 704 WHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQI 763
           WHH DA++CCSLK+LPVF FANQAGLDMLETTLVALQDITL+KIFD+ GRKAL A+F ++
Sbjct: 731 WHHQDAILCCSLKSLPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALCADFAKL 790

Query: 764 MQQGFACLQGGICLSSMGRPVSYERAVAWKVL-NEEETAHCICFMFINWSFV 814
           MQQGFA L GGIC+S+MGR VSYE+AVAWKVL  +E T HC+ F F+NWSFV
Sbjct: 791 MQQGFAGLPGGICMSTMGRHVSYEQAVAWKVLAADESTVHCLAFSFVNWSFV 842


>gi|326517046|dbj|BAJ96515.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 845

 Score = 1124 bits (2907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/835 (65%), Positives = 668/835 (80%), Gaps = 37/835 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+REC +L++++PKQIKVWFQNRRCR
Sbjct: 15  MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLASVDPKQIKVWFQNRRCR 74

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKE+ RLQ++NRKL AMNKLLMEENDRLQKQVS LVYENGY+RQ T S  LAT DTS
Sbjct: 75  EKQRKESGRLQSLNRKLAAMNKLLMEENDRLQKQVSHLVYENGYYRQQTHSAGLATTDTS 134

Query: 133 CESVVTSGQHHLTP--QHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGP 190
           CESVVTSGQ ++      PPRDASPAGL+SIAEETLTEFLSKATGTAVEWVQMPGMKPGP
Sbjct: 135 CESVVTSGQQNVVAVPPPPPRDASPAGLMSIAEETLTEFLSKATGTAVEWVQMPGMKPGP 194

Query: 191 DSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------RGSAI----------- 233
           DS+GI+AISHGC+GVAARACGLVG+EP +VA+ILKDRP      R   I           
Sbjct: 195 DSIGIIAISHGCAGVAARACGLVGMEPAKVADILKDRPLWLRDCRSMEIVNVLPAGSNGT 254

Query: 234 -------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAE 286
                  LYA TTLAPARDFWL+RYTS+L+DGSLVVCERSL + Q GP+MP VQ FVR E
Sbjct: 255 IELLYMQLYAPTTLAPARDFWLMRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFVRGE 314

Query: 287 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQM 346
           MLPSG+LIRP +GGGS+IHIVDH+DLEPWSVPEV+RPLYESS ++AQK +MAALR LRQ+
Sbjct: 315 MLPSGFLIRPSDGGGSVIHIVDHLDLEPWSVPEVVRPLYESSAMVAQKMSMAALRYLRQV 374

Query: 347 AQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSS 406
           A E T S + GWGR+PAALRALSQ+L+RGFNE + G  D+GW+V+ +DG+DDV + VNSS
Sbjct: 375 AHEDTHSVITGWGRQPAALRALSQKLTRGFNETLGGLADDGWSVIESDGVDDVCISVNSS 434

Query: 407 PDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSA 466
           P KLM  N +F++G P VS  VLCAKASMLLQ+V P  LLRFLREHRS+WAD+++D + A
Sbjct: 435 PSKLMSCNATFSDGLPMVSTGVLCAKASMLLQDVSPPSLLRFLREHRSQWADSSLDAFFA 494

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
           +A+K   C+LP SR+G F  QVILPLAHT + EEF+EVIK+ G   + +D +M RD+FLL
Sbjct: 495 SALKPNFCNLPVSRLGGFSGQVILPLAHTFDPEEFLEVIKI-GNASNYQDTLMHRDLFLL 553

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASA 586
           Q+ +G+DEN +GTC+ELIFAPIDASF+DD+PLLPSGFRIIP++S  +T SPN TLDLAS 
Sbjct: 554 QMYNGVDENTIGTCSELIFAPIDASFSDDSPLLPSGFRIIPIESPLDTPSPNCTLDLAST 613

Query: 587 LEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVA 646
           LE+G  G+R T +  + S   ++VMTIAF+FAFESH+Q+ VA MARQY+RSIISSVQR+A
Sbjct: 614 LEVGTPGSRITGHSRSGS---KAVMTIAFQFAFESHLQDSVAVMARQYMRSIISSVQRIA 670

Query: 647 LALSPSNISSQAGLR-TPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS-ESILKNLW 704
           LALS S++      R  P  TPEA TL+RWI  SYR + G +L+K +   S ES LK LW
Sbjct: 671 LALSSSHLVPHGSSRLAPPVTPEAATLSRWIVQSYRFHFGAELIKPADASSGESALKALW 730

Query: 705 HHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKI--FDDHGRKALFAEF-P 761
           HHT A++CCSLKA+P  TFANQ+GLDMLETTL AL++IT++K+  ++  G+  L A+   
Sbjct: 731 HHTSAILCCSLKAMPELTFANQSGLDMLETTLAALREITMDKVLEYEQGGKGLLCADLMA 790

Query: 762 QIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNE--EETAHCICFMFINWSFV 814
            + +QGFAC++GG C SSMGRP SY +AVAWKVL++     AHC+CF FI+WSFV
Sbjct: 791 SVAEQGFACVEGGTCASSMGRPASYGKAVAWKVLDDGGAGAAHCVCFAFIDWSFV 845


>gi|115489546|ref|NP_001067260.1| Os12g0612700 [Oryza sativa Japonica Group]
 gi|122248513|sp|Q2QM96.1|HOX33_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX33; AltName:
           Full=HD-ZIP protein HOX33; AltName: Full=Homeodomain
           transcription factor HOX33; AltName: Full=OsHox33
 gi|187609460|sp|A2ZMN9.2|HOX33_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX33; AltName:
           Full=HD-ZIP protein HOX33; AltName: Full=Homeodomain
           transcription factor HOX33; AltName: Full=OsHox33
 gi|77556590|gb|ABA99386.1| class III HD-Zip protein 4, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113649767|dbj|BAF30279.1| Os12g0612700 [Oryza sativa Japonica Group]
 gi|218187239|gb|EEC69666.1| hypothetical protein OsI_39093 [Oryza sativa Indica Group]
 gi|222617467|gb|EEE53599.1| hypothetical protein OsJ_36852 [Oryza sativa Japonica Group]
          Length = 855

 Score = 1122 bits (2903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/833 (65%), Positives = 656/833 (78%), Gaps = 33/833 (3%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 25  VDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEASRLQ VNRKL AMNKLLMEENDRLQKQVS+LVYENGY R    + + AT DTS
Sbjct: 85  EKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSRLVYENGYMRTQLHNPSAATTDTS 144

Query: 133 CESVVTSGQHHLTPQ----HPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
           CESVVTSGQHH        HP RDA+ PAGLL+IAEETL EF+SKATGTAVEWVQM GMK
Sbjct: 145 CESVVTSGQHHQQQNPAVLHPQRDANNPAGLLAIAEETLAEFMSKATGTAVEWVQMVGMK 204

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDS+GI+A+SH CSGVAARACGLV LEPT+VAEILKDRP                   
Sbjct: 205 PGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDIIHVIPTGN 264

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I       YA TTLA  RDFW LRYTS LEDGSLV+CERSL     GP+ P   +F+
Sbjct: 265 GGTIELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFI 324

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAE+LPSGYLIRPCEGGGS+I+IVDH+DL+ WSVPEVLRPLYES  +LAQK T+AALR +
Sbjct: 325 RAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALRHI 384

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+A E +     G GR+PA  R  SQRLSRGFN+AV+GF D+GW+++ +DG +D+T+ V
Sbjct: 385 RQIAHESSGEIPYGAGRQPAVFRTFSQRLSRGFNDAVSGFPDDGWSLLSSDGSEDITISV 444

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NSSP+KL+G ++S    F  V   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD  +D 
Sbjct: 445 NSSPNKLVGSHVSPNPLFSTVGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDA 504

Query: 464 YSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           YSAA+++  P ++PG R   F GSQVILPLAHT+EHEEF+EVI+LEG G S ++ ++ RD
Sbjct: 505 YSAASLRASPYAVPGLRTSGFMGSQVILPLAHTLEHEEFLEVIRLEGHGFSHDEVLLSRD 564

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           M+LLQLCSG+DENA    A+L+FAPID SFADDAPLLPSGFR+IPLD+  +  S  RTLD
Sbjct: 565 MYLLQLCSGVDENATSASAQLVFAPIDESFADDAPLLPSGFRVIPLDTKMDGPSATRTLD 624

Query: 583 LASALEIGPAG-NRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISS 641
           LASALE+GP G +RA+     + TC RSV+TIAF+F++E+H++E VA MAR YVR++++S
Sbjct: 625 LASALEVGPGGASRAS--VEASGTCNRSVLTIAFQFSYENHLRESVAAMARSYVRAVMAS 682

Query: 642 VQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILK 701
           VQRVA+A++PS +  Q G++ P  +PEALTLA WI  SYR + G D+  S +E ++S L 
Sbjct: 683 VQRVAVAIAPSRLGPQIGMKHPPASPEALTLASWIGRSYRAHTGADIRWSDTEDADSPLA 742

Query: 702 NLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFP 761
            LW H+DA++CCSLK  P+FTFAN AGLD+LETTLV LQDI+LE I DD GRKAL +EFP
Sbjct: 743 LLWKHSDAILCCSLKPAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFP 802

Query: 762 QIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +IMQQGF  L GG+C SSMGR  SYE+AVAWKVL++++  HC+ FM +NW+F+
Sbjct: 803 KIMQQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM 855


>gi|169730542|gb|ACA64837.1| SKIP interacting protein 22 [Oryza sativa]
          Length = 855

 Score = 1118 bits (2893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/833 (65%), Positives = 655/833 (78%), Gaps = 33/833 (3%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 25  VDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEASRLQ VNRKL AMNKLLMEENDRLQKQVS+LVYENGY R    + + AT DTS
Sbjct: 85  EKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSRLVYENGYMRTQLHNPSAATTDTS 144

Query: 133 CESVVTSGQHHLTPQ----HPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
           CESVVTSGQHH        HP RDA+ PAGLL+IAEETL EF+SKATGTAVEWVQM GMK
Sbjct: 145 CESVVTSGQHHQQQNPAVLHPQRDANNPAGLLAIAEETLAEFMSKATGTAVEWVQMVGMK 204

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDS+GI+ +SH CSGVAARACGLV LEPT+VAEILKDRP                   
Sbjct: 205 PGPDSIGIITVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDIIHVIPTGN 264

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I       +A TTLA  RDFW LRYTS LEDGSLV+CERSL     GP+ P   +F+
Sbjct: 265 GGTIELIYMQTHAPTTLAAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTLNFI 324

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAE+LPSGYLIRPCEGGGS+I+IVDH+DL+ WSVPEVLRPLYES  +LAQK T+AALR +
Sbjct: 325 RAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALRHI 384

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+A E +     G GR+PA  R  SQRLSRGFN+AV+GF D+GW+++ +DG +D+T+ V
Sbjct: 385 RQIAHESSGEIPYGAGRQPAVFRTFSQRLSRGFNDAVSGFPDDGWSLLSSDGSEDITISV 444

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NSSP+KL+G ++S    F  V   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD  +D 
Sbjct: 445 NSSPNKLVGSHVSPNPLFSTVGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDA 504

Query: 464 YSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           YSAA+++  P ++PG R   F GSQVILPLAHT+EHEEF+EVI+LEG G S ++ ++ RD
Sbjct: 505 YSAASLRASPYAVPGLRTSGFMGSQVILPLAHTLEHEEFLEVIRLEGHGFSHDEVLLSRD 564

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           M+LLQLCSG+DENA    A+L+FAPID SFADDAPLLPSGFR+IPLD+  +  S  RTLD
Sbjct: 565 MYLLQLCSGVDENATSASAQLVFAPIDESFADDAPLLPSGFRVIPLDTKMDGPSATRTLD 624

Query: 583 LASALEIGPAG-NRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISS 641
           LASALE+GP G +RA+     + TC RSV+TIAF+F++E+H++E VA MAR YVR++++S
Sbjct: 625 LASALEVGPGGASRAS--VEASGTCNRSVLTIAFQFSYENHLRESVAAMARSYVRAVMAS 682

Query: 642 VQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILK 701
           VQRVA+A++PS +  Q G++ P  +PEALTLA WI  SYR + G D+  S +E ++S L 
Sbjct: 683 VQRVAVAIAPSRLGPQIGMKHPPASPEALTLASWIGRSYRAHTGADIRWSDTEDADSPLA 742

Query: 702 NLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFP 761
            LW H+DA++CCSLK  P+FTFAN AGLD+LETTLV LQDI+LE I DD GRKAL +EFP
Sbjct: 743 LLWKHSDAILCCSLKPAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFP 802

Query: 762 QIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +IMQQGF  L GG+C SSMGR  SYE+AVAWKVL++++  HC+ FM +NW+F+
Sbjct: 803 KIMQQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM 855


>gi|356539327|ref|XP_003538150.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Glycine
           max]
          Length = 842

 Score = 1118 bits (2891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/838 (67%), Positives = 648/838 (77%), Gaps = 52/838 (6%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           LD+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 21  LDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 80

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENG+ RQ   + +  T D S
Sbjct: 81  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMRQQLHTPSATTTDAS 140

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           C+SVVT      TPQH  RDAS PAGLLSIAEETLTEFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 141 CDSVVT------TPQHTLRDASNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPD 194

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           SVGI AIS  CSGVAARACGLV LEPT++AEILKDRP                   G  I
Sbjct: 195 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTI 254

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                  YA TTLAPARDFW LRYT+ LE+GSLVVCERSL     GP       FVRAE 
Sbjct: 255 ELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGTGPNPAAAAQFVRAET 314

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPCEGGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQK T+AALR +RQ+A
Sbjct: 315 LPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIRQIA 374

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V G GR+PA LR  SQRLSRGFN+AVNGF D+GWTV+  DG +DV + VNS+ 
Sbjct: 375 QETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWTVLNCDGAEDVIIAVNSTK 434

Query: 408 DKLMGLN-----LSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNID 462
           + L G +     L+F  G       +LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+D
Sbjct: 435 N-LSGTSNPASSLTFLGG-------ILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVD 486

Query: 463 VYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPR 521
            YSAA++K G  + PG R   F GSQ+I+PL HTIEHEE +EVI+LEG   + EDA + R
Sbjct: 487 AYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFVSR 546

Query: 522 DMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSG----KETSSP 577
           D+ LLQ+CSG+DENAVG C+EL+FAPID  F DDAPL+PSGFRIIPLDS     K+  + 
Sbjct: 547 DIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLVPSGFRIIPLDSKPGDKKDAVAT 606

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
           NRTLDL S  E+GPA     +  S+ +T  RSV+TIAF+F F+S +Q++VA MARQYVRS
Sbjct: 607 NRTLDLTSGFEVGPATTAGADASSSQNT--RSVLTIAFQFPFDSSLQDNVAVMARQYVRS 664

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
           +ISSVQRVA+A+SPS I+   G +   G+PEA+TLA WIC SY  YLG DLL+S S   +
Sbjct: 665 VISSVQRVAMAISPSGINPSIGAKLSPGSPEAVTLAHWICQSYSYYLGSDLLRSDSLVGD 724

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
            +LK LWHH DA++CCSLK+LPVF FANQAGLDMLETTLVALQDITL+KIFD+ GRKAL 
Sbjct: 725 MMLKQLWHHQDAILCCSLKSLPVFIFANQAGLDMLETTLVALQDITLDKIFDEAGRKALC 784

Query: 758 AEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLN-EEETAHCICFMFINWSFV 814
            +F ++M+QGFA L  GIC+S+MGR VSY++A+AWKVL  E+ T HC+ F FINWSFV
Sbjct: 785 TDFAKLMEQGFAYLPAGICMSTMGRHVSYDQAIAWKVLTGEDNTVHCLAFSFINWSFV 842


>gi|356542621|ref|XP_003539765.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform 2
           [Glycine max]
          Length = 844

 Score = 1115 bits (2884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/840 (67%), Positives = 650/840 (77%), Gaps = 54/840 (6%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           LD+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 21  LDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 80

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENG+ RQ   + + AT D S
Sbjct: 81  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMRQQLHTPSAATTDAS 140

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           C+SVVT      TPQH  RDA+ PAGLLSIAEETLTEFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 141 CDSVVT------TPQHTMRDANNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPD 194

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           SVGI AIS  CSGVAARACGLV LEPT++AEILKDRP                   G  I
Sbjct: 195 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTI 254

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                  YA TTLAPARDFW LRYT+ LE+GSLVVCERSL     GP       FVRAE 
Sbjct: 255 ELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGTGPNPAAAAQFVRAET 314

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPCEGGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQK T+AALR +RQ+A
Sbjct: 315 LPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIRQIA 374

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V G GR+PA LR  SQRLSRGFN+AVNGF D+GWTV+  DG +DV + VNS+ 
Sbjct: 375 QETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWTVLNCDGAEDVFIAVNSTK 434

Query: 408 DKLMGL-----NLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNID 462
           + L G      +L+F  G       +LCAKASMLLQNVPPA+L+RFLREHRSEWAD ++D
Sbjct: 435 N-LSGTSNPASSLTFLGG-------ILCAKASMLLQNVPPAVLVRFLREHRSEWADFSVD 486

Query: 463 VYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPR 521
            YSAA++K G  + PG R   F GSQ+I+PL HTIEHEE +EVI+LEG   + EDA + R
Sbjct: 487 AYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFVSR 546

Query: 522 DMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSG--KETSSPNR 579
           D+ LLQ+CSG+DENAVG C+EL+FAPID  F DDAPL+PSGFRIIPLDS   K  SS NR
Sbjct: 547 DIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLIPSGFRIIPLDSKPVKFCSSVNR 606

Query: 580 TLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSII 639
           TLDL S  E+GPA    T+  S+ +T  RSV+TIAF+F F+S +Q++VA MARQYVRS+I
Sbjct: 607 TLDLTSGFEVGPATTAGTDASSSQNT--RSVLTIAFQFPFDSSLQDNVAVMARQYVRSVI 664

Query: 640 SSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESI 699
           SSVQRVA+A+SPS IS   G +   G+PEA+TLA WIC SY  Y+G DLL+S S   + +
Sbjct: 665 SSVQRVAMAISPSGISPSVGAKLSPGSPEAVTLAHWICQSYSYYIGSDLLRSDSLVGDMM 724

Query: 700 LKNLWHHTDAVMCCSLKA----LPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKA 755
           LK LWHH DA++CCSLKA    LPVF FANQAGLDMLETTLVALQDITL+KIFD+ GRKA
Sbjct: 725 LKQLWHHQDAILCCSLKASKLPLPVFIFANQAGLDMLETTLVALQDITLDKIFDEAGRKA 784

Query: 756 LFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLN-EEETAHCICFMFINWSFV 814
           L  +F ++M+QGFA L  GIC+S+MGR VSY++A+AWKVL  E+ T HC+ F FINWSFV
Sbjct: 785 LCTDFAKLMEQGFAYLPAGICMSTMGRHVSYDQAIAWKVLTGEDNTVHCLAFSFINWSFV 844


>gi|356542619|ref|XP_003539764.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform 1
           [Glycine max]
          Length = 845

 Score = 1113 bits (2879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/841 (66%), Positives = 650/841 (77%), Gaps = 55/841 (6%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           LD+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 21  LDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 80

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENG+ RQ   + + AT D S
Sbjct: 81  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMRQQLHTPSAATTDAS 140

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           C+SVVT      TPQH  RDA+ PAGLLSIAEETLTEFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 141 CDSVVT------TPQHTMRDANNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPD 194

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           SVGI AIS  CSGVAARACGLV LEPT++AEILKDRP                   G  I
Sbjct: 195 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTI 254

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                  YA TTLAPARDFW LRYT+ LE+GSLVVCERSL     GP       FVRAE 
Sbjct: 255 ELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGTGPNPAAAAQFVRAET 314

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPCEGGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQK T+AALR +RQ+A
Sbjct: 315 LPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIRQIA 374

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V G GR+PA LR  SQRLSRGFN+AVNGF D+GWTV+  DG +DV + VNS+ 
Sbjct: 375 QETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWTVLNCDGAEDVFIAVNSTK 434

Query: 408 DKLMGL-----NLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNID 462
           + L G      +L+F  G       +LCAKASMLLQNVPPA+L+RFLREHRSEWAD ++D
Sbjct: 435 N-LSGTSNPASSLTFLGG-------ILCAKASMLLQNVPPAVLVRFLREHRSEWADFSVD 486

Query: 463 VYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPR 521
            YSAA++K G  + PG R   F GSQ+I+PL HTIEHEE +EVI+LEG   + EDA + R
Sbjct: 487 AYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFVSR 546

Query: 522 DMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS---GKETSSPN 578
           D+ LLQ+CSG+DENAVG C+EL+FAPID  F DDAPL+PSGFRIIPLDS    K+  + N
Sbjct: 547 DIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLIPSGFRIIPLDSKPGDKKEVATN 606

Query: 579 RTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSI 638
           RTLDL S  E+GPA    T+  S+ +T  RSV+TIAF+F F+S +Q++VA MARQYVRS+
Sbjct: 607 RTLDLTSGFEVGPATTAGTDASSSQNT--RSVLTIAFQFPFDSSLQDNVAVMARQYVRSV 664

Query: 639 ISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSES 698
           ISSVQRVA+A+SPS IS   G +   G+PEA+TLA WIC SY  Y+G DLL+S S   + 
Sbjct: 665 ISSVQRVAMAISPSGISPSVGAKLSPGSPEAVTLAHWICQSYSYYIGSDLLRSDSLVGDM 724

Query: 699 ILKNLWHHTDAVMCCSLKA----LPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 754
           +LK LWHH DA++CCSLKA    LPVF FANQAGLDMLETTLVALQDITL+KIFD+ GRK
Sbjct: 725 MLKQLWHHQDAILCCSLKASKLPLPVFIFANQAGLDMLETTLVALQDITLDKIFDEAGRK 784

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLN-EEETAHCICFMFINWSF 813
           AL  +F ++M+QGFA L  GIC+S+MGR VSY++A+AWKVL  E+ T HC+ F FINWSF
Sbjct: 785 ALCTDFAKLMEQGFAYLPAGICMSTMGRHVSYDQAIAWKVLTGEDNTVHCLAFSFINWSF 844

Query: 814 V 814
           V
Sbjct: 845 V 845


>gi|109729912|tpg|DAA05770.1| TPA_inf: class III HD-Zip III protein HB8 [Zea mays]
 gi|413947684|gb|AFW80333.1| putative homeobox/bZIP/lipid-binding protein family [Zea mays]
          Length = 858

 Score = 1112 bits (2877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 564/847 (66%), Positives = 678/847 (80%), Gaps = 47/847 (5%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+R+CP+L++++PKQIKVWFQNRRCR
Sbjct: 14  MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRDCPVLASVDPKQIKVWFQNRRCR 73

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKE+SRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGY+RQ TQS  LAT DTS
Sbjct: 74  EKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYYRQQTQSAGLATTDTS 133

Query: 133 CESVVTSGQHHLT---PQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPG 189
           CESVVTSG  ++    PQ  PRDA PAGL+SIAEETLTEFLSKATGTAVEWVQMPGMKPG
Sbjct: 134 CESVVTSGPQNVAAVLPQAQPRDAGPAGLMSIAEETLTEFLSKATGTAVEWVQMPGMKPG 193

Query: 190 PDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------RGSAI---------- 233
           PDS+GI+AISHGC GVAARACGLVG+EP +VAE+LKDRP      R   +          
Sbjct: 194 PDSIGIIAISHGCPGVAARACGLVGMEPAKVAEVLKDRPLWLRDCRSMEVVNVLPAGTSG 253

Query: 234 --------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRA 285
                   LYA TTLAPARDFWLLRYTS+L+DGSLVVCERSL   Q GP+MP VQ FVR 
Sbjct: 254 TVELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERSLGANQGGPSMPLVQPFVRG 313

Query: 286 EMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ 345
           EMLPSG+L+RP +GGGS+IHIVDHMDLEPWSVPEV+RPLYESS ++AQK +MAALR LRQ
Sbjct: 314 EMLPSGFLVRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKMSMAALRYLRQ 373

Query: 346 MAQEVTQSSV--NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           +A E T  SV   GWGR+PA+LRALSQ+L+RGFNEA+NG  D+GW+V+G+DG+DDV V V
Sbjct: 374 VAHEDTAHSVVTGGWGRQPASLRALSQKLTRGFNEALNGLADDGWSVVGSDGVDDVCVSV 433

Query: 404 NSSPDKLMGLNLSFANGFPAV---SNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNN 460
           +SSP +++  N +F+NG P V   S++VLCAKASMLLQ+V P  LLRF+RE RS+WAD+N
Sbjct: 434 SSSPSRVVSCNATFSNG-PVVGTGSSSVLCAKASMLLQDVSPPELLRFMREQRSQWADSN 492

Query: 461 IDVYSAAAIKVGPCSLP-GSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
           +D + A+A+K   CSLP   R+G FG QVILPLAHT + EEF+EVIK+   G+  +DA++
Sbjct: 493 LDAFFASAMKPDFCSLPIPPRLGGFGGQVILPLAHTFDPEEFLEVIKVGNAGNY-QDALL 551

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNR 579
            RD+FLLQ+ +G+DEN  GTC+ELIFAPIDASF+DD+PLLPSGFRIIP+D+  +TSSP  
Sbjct: 552 HRDLFLLQMYNGVDENMAGTCSELIFAPIDASFSDDSPLLPSGFRIIPIDAPLDTSSPKC 611

Query: 580 TLDLASALEIGPAGNRATNNYSTNSTCM-----RSVMTIAFEFAFESHMQEHVATMARQY 634
           TLDLAS LE G   +R + +    +        ++VMTI F+FAFESH+Q+ VA MARQY
Sbjct: 612 TLDLASTLEAGTPRSRTSGSGGPGTAAAACAGSKAVMTIVFQFAFESHLQDSVAAMARQY 671

Query: 635 VRSIISSVQRVALALSPSNI----SSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLK 690
           VRSI++SVQR+ALALS + +     S      P   PEA TLARWIC SYR + G +L+K
Sbjct: 672 VRSIVASVQRIALALSSARLVVPHGSGVSHGAPAAGPEAATLARWICQSYRFHFGAELIK 731

Query: 691 SS--SEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIF 748
           S+  S   E++LK LWHH  A++CCSLKALPVFTFANQ+GLDMLETTLVALQDI LE++F
Sbjct: 732 SADGSGCGEAVLKTLWHHAGAILCCSLKALPVFTFANQSGLDMLETTLVALQDIALERVF 791

Query: 749 DDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETA-HCICFM 807
           DD GRK L AE P +M+QGFAC+ GG+C+S +GRPVSYE+A+AWKVL++     HC+CFM
Sbjct: 792 DDQGRKNLCAELPGVMEQGFACVPGGMCVSGLGRPVSYEKALAWKVLDDGSGGVHCVCFM 851

Query: 808 FINWSFV 814
           F+NWSFV
Sbjct: 852 FVNWSFV 858


>gi|357156427|ref|XP_003577453.1| PREDICTED: homeobox-leucine zipper protein HOX33-like [Brachypodium
           distachyon]
          Length = 875

 Score = 1108 bits (2865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/837 (64%), Positives = 657/837 (78%), Gaps = 35/837 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQ+IR+CPIL NIEPKQIKVWFQNRRCR
Sbjct: 39  VDTGKYVRYTPEQVEALERVYTECPKPSSLRRQQIIRDCPILCNIEPKQIKVWFQNRRCR 98

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN---GYFRQHTQSTTLATK 129
           EKQRKE+SR+Q VNRKLTAMNKLLMEENDRLQKQVS+LVYEN      +   ++ + AT 
Sbjct: 99  EKQRKESSRMQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENMSAKSLKTQLRNASAATT 158

Query: 130 DTSCESVVTSGQHHLTPQ----HPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
           DTSCESVVTSGQHH         P RDA+ PAGLL+IAEETL EFLSKATGTAVEWVQM 
Sbjct: 159 DTSCESVVTSGQHHQQQNPAAPRPQRDANNPAGLLAIAEETLAEFLSKATGTAVEWVQMV 218

Query: 185 GMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP---------------- 228
           GMKPGPDS+GI+A+SH CSGVAARACGLV LEPT+VAEILKDRP                
Sbjct: 219 GMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDILHVIP 278

Query: 229 --RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQ 280
              G  I       YA TTL   RDFW LRYTS LEDGSLV+CERSL     GP+ P   
Sbjct: 279 TGNGGTIELIYMQTYAPTTLVAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTP 338

Query: 281 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL 340
           +F+RAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYES  +LAQKTT+AAL
Sbjct: 339 NFIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKTTIAAL 398

Query: 341 RQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVT 400
           R +RQ+A E +     G GR+PA LR  SQRLSRGFN+AV+GF D+GW+++ +DG +D+T
Sbjct: 399 RHIRQIAHESSGEIPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSLLSSDGSEDIT 458

Query: 401 VLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNN 460
           + VNSSP+KL G ++S +  F A+   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD  
Sbjct: 459 ITVNSSPNKLAGSHVSPSPLFSAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPG 518

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
           +D YSAA+++  P ++PG R G F GSQVILPLAHT+EHEEF+EV++LEG G S ++ ++
Sbjct: 519 VDAYSAASLRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVLRLEGHGFSHDEVLL 578

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNR 579
            RDM+LLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD+  +  S  R
Sbjct: 579 ARDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDTKTDVPSATR 638

Query: 580 TLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSII 639
           TLDLASALE+G  G    ++ ++ +  MRSV+TIAF+F+FE+H++E VA MARQYVR+++
Sbjct: 639 TLDLASALEVGSGGALRGSSDASGTCNMRSVLTIAFQFSFENHLRESVAAMARQYVRAVM 698

Query: 640 SSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESI 699
           +SVQRVA+A++PS + SQ  L+ P G+PEALTLA WI  SY  + G ++  S++E ++S 
Sbjct: 699 ASVQRVAMAIAPSRLGSQIELKHPPGSPEALTLASWIGKSYSAHTGAEIRWSNTEDADSP 758

Query: 700 LKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAE 759
           L  LW+H+DA++CCSLKA P+FTF N A LDMLETTLV LQDI+LE I DD GRKAL  +
Sbjct: 759 LMLLWNHSDAILCCSLKAAPMFTFGNNAALDMLETTLVNLQDISLEAILDDEGRKALCTD 818

Query: 760 FPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETA--HCICFMFINWSFV 814
           F +IMQQGFA L  G+C SSMGR  SYE+AVAWKVL+++     HC+ FMF+NW+F+
Sbjct: 819 FSKIMQQGFAYLPAGVCKSSMGRQASYEQAVAWKVLSDDVAGAPHCLAFMFVNWTFL 875


>gi|187609452|sp|A2WLR5.2|HOX29_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX29; AltName:
           Full=HD-ZIP protein HOX29; AltName: Full=Homeodomain
           transcription factor HOX29; AltName: Full=OsHox29
          Length = 861

 Score = 1106 bits (2861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 558/865 (64%), Positives = 675/865 (78%), Gaps = 67/865 (7%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 1   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 60

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENG----------------- 115
           EKQRKE+SRLQA+NRKLTAMNKLLMEENDRLQKQVSQLVY++G                 
Sbjct: 61  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 120

Query: 116 YFRQHTQSTTLAT-KDTSCESVVTSGQHHLTP-----QHPPRDASPAGLLSIAEETLTEF 169
                     LAT  DTSCESVVTSG HH        Q PPRDASPAGL+SIAEETLTEF
Sbjct: 121 PQAAAAAGHQLATATDTSCESVVTSGHHHQQQQHNVVQPPPRDASPAGLMSIAEETLTEF 180

Query: 170 LSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP- 228
           LSKATGTAVEW+QMPGMKPGPDS+GI+AISHGC+GVAARACGLVG+EP +VAEILKDRP 
Sbjct: 181 LSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPL 240

Query: 229 -----RGSAI------------------LYALTTLAPARDFWLLRYTSVLEDGSLVVCER 265
                R   +                  LYA TTLAPARDFWLLRYTS+L+DGSLVVCER
Sbjct: 241 WLRDCRSMDVVNVLPAGANGTIELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVCER 300

Query: 266 SLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 325
           SL + Q GP+MP VQ F+R EMLPSG+LIRP +GGGS+IHIVDHMDLEPWSVPEV+RPLY
Sbjct: 301 SLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLY 360

Query: 326 ESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTD 385
           ESS ++AQK +MAALR LRQ+A E T+S + GWGR+PAALRALSQ+L+RGFNEA+NG  D
Sbjct: 361 ESSAMVAQKISMAALRYLRQVAHEDTRSVITGWGRQPAALRALSQKLTRGFNEALNGLAD 420

Query: 386 EGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAIL 445
           +GW+V+ +DG+DDV + VNSS  K++G N +F++G P VS  VLCAKASMLLQ+V P  L
Sbjct: 421 DGWSVIESDGVDDVCISVNSS--KVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPPSL 478

Query: 446 LRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVI 505
           L+FLREHRS+WAD+N+D + A+A+K   C+LP SR+G F  QVILPLAHT E EEF+EVI
Sbjct: 479 LQFLREHRSQWADSNLDAFFASAMKPNFCNLPMSRLGGFSGQVILPLAHTFEPEEFLEVI 538

Query: 506 KLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRI 565
           KL G   + +D ++ RD+FLLQ+ +G++E++ GTC+ELIFAPIDASF+DD+PLLPSGFRI
Sbjct: 539 KL-GNASNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSPLLPSGFRI 597

Query: 566 IPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTC--------MRSVMTIAFEF 617
           IP+DS  +TSSPN TLDLAS LE     +R +       TC         ++VMTIAF+F
Sbjct: 598 IPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVNGGGGTCAAAAASSSSKAVMTIAFQF 657

Query: 618 AFESHMQEHVATMARQYVRSIISSVQRVALALS-----PSNISSQAGLRTPLGTPEALTL 672
           AF+ H+Q+ VA MARQY+R+IISSVQR+A+ALS     P   ++ A   +P+ TPEA TL
Sbjct: 658 AFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAAAAAAQLSPV-TPEAATL 716

Query: 673 ARWICHSYRCYLGVDLLKS--SSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLD 730
            RWIC SYR + G +L+KS  ++  +ESILK +WHH  A++CCSLKA+PVFTFANQ+GLD
Sbjct: 717 PRWICQSYRFHFGAELIKSVDANSSNESILKAVWHHPSAILCCSLKAMPVFTFANQSGLD 776

Query: 731 MLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAV 790
           MLETTLVALQD+TLEK+FDD GRK L  E P IM+QG AC++GG+C+SS+GR  SYE+AV
Sbjct: 777 MLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQGMACMEGGVCVSSVGRAASYEKAV 836

Query: 791 AWKVLN-EEETAHCICFMFINWSFV 814
           AWKV++ +   AHCI FMFINW+F+
Sbjct: 837 AWKVVDGDGGGAHCISFMFINWTFL 861


>gi|449433543|ref|XP_004134557.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ATHB-9-like [Cucumis sativus]
          Length = 847

 Score = 1105 bits (2858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 549/844 (65%), Positives = 651/844 (77%), Gaps = 38/844 (4%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           KD     +D+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 7   KDTSNKQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVW 66

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKE+SRLQ+VNRKL+AMNKLLMEENDRLQKQVS LVYENG+ RQ   S +
Sbjct: 67  FQNRRCREKQRKESSRLQSVNRKLSAMNKLLMEENDRLQKQVSHLVYENGFMRQQLHSAS 126

Query: 126 LATKDTSCESVVTSGQHHLTPQHPP----RDAS-PAGLLSIAEETLTEFLSKATGTAVEW 180
             T D SCESVV SGQ        P    RD + PAGLL++AEETL EFLSKATGTAV+W
Sbjct: 127 GTTTDNSCESVVMSGQPQQQQNPNPQHPNRDVNNPAGLLAVAEETLAEFLSKATGTAVDW 186

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR------------- 227
           VQM GMKPGPDS+GIVA+S  CSGVAARACGLV LEPT+VAEILKDR             
Sbjct: 187 VQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRLSWYRDCRCLNVL 246

Query: 228 ---PRGSA--------ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
              P G+           YA TTLA ARDFW +RYT+ LEDGSLVVCERSL +   GP  
Sbjct: 247 SVIPTGNGGTIELIYMQTYAPTTLAAARDFWTMRYTTSLEDGSLVVCERSLSSSSGGPAG 306

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           PP   FVRAEMLPSGYLIR CEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS +LAQK T
Sbjct: 307 PPPSTFVRAEMLPSGYLIRACEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQKIT 366

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           +AALR +RQ+AQE         GR+PA LR  SQ+L RGFN+AVNGF D+GW+ MG+DG+
Sbjct: 367 IAALRHIRQIAQETNGEIQCTGGRQPAVLRTFSQKLCRGFNDAVNGFADDGWSPMGSDGV 426

Query: 397 DDVTVLVNSSPDKLMG--LNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
           +DVT+L+N+S +K  G   N S    +P+    V+CAKASMLLQNVPPA+L+RFLREHRS
Sbjct: 427 EDVTILINTSANKFSGSQYNTSL---YPSFGGGVMCAKASMLLQNVPPALLVRFLREHRS 483

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHS 513
           EWAD  +D YSAA++K  P ++P +R G F  SQVILPLA T+EHEEF+EV++LEG+   
Sbjct: 484 EWADYGVDAYSAASLKASPYAVPCARPGGFPSSQVILPLATTVEHEEFLEVVRLEGLAFF 543

Query: 514 PEDAIMPR-DMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGK 572
                     +F  QLCSG+DENAVG CA+L+FAPID SFADDAPLLPSGFR+IPLD   
Sbjct: 544 FFAFXXYLFSIFSWQLCSGVDENAVGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKT 603

Query: 573 ETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMAR 632
           +  +  RTLDLAS LE+G    R+      ++  +RSV+TIAF+F FE+H+QE+VA MAR
Sbjct: 604 DEPTAARTLDLASTLEVGANAARSAGETDLSNYNLRSVLTIAFQFTFENHLQENVAAMAR 663

Query: 633 QYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSS 692
           QYVRS++ SVQRVA+A+SPS +SS  GL+   G+PEALTLARWIC SYR ++G +LL++ 
Sbjct: 664 QYVRSVVGSVQRVAMAISPSRLSSNMGLKPLPGSPEALTLARWICRSYRVHVGAELLQAD 723

Query: 693 SEGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFDD 750
           S+  +++LK LWHH+DA+MCCS+K  A  VFTFANQAGLDMLETTLV LQDI L+KI D+
Sbjct: 724 SQSGDAMLKQLWHHSDAIMCCSVKTNASAVFTFANQAGLDMLETTLVGLQDIMLDKILDE 783

Query: 751 HGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFIN 810
            GRK L +EFP+IMQQGFA L  GIC+SSMGRP+SYE+AVAWKVLN++++ HC+ FMFIN
Sbjct: 784 AGRKILCSEFPKIMQQGFANLPSGICVSSMGRPISYEQAVAWKVLNDDDSNHCLAFMFIN 843

Query: 811 WSFV 814
           WSFV
Sbjct: 844 WSFV 847


>gi|222625436|gb|EEE59568.1| hypothetical protein OsJ_11861 [Oryza sativa Japonica Group]
          Length = 807

 Score = 1105 bits (2857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/800 (67%), Positives = 642/800 (80%), Gaps = 34/800 (4%)

Query: 47  LIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQ 106
           LIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQ
Sbjct: 10  LIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQ 69

Query: 107 VSQLVYENGYFRQHTQSTTLATKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSI 161
           VS+LVYENGY RQ   + ++AT DTSCESVVTSGQHH         P RDA+ PAGLL+I
Sbjct: 70  VSRLVYENGYMRQQLHNPSVATTDTSCESVVTSGQHHQQQNPAATRPQRDANNPAGLLAI 129

Query: 162 AEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVA 221
           AEETL EFLSKATGTAV+WVQM GMKPGPDS+GI+A+SH CSGVAARACGLV LEPT+VA
Sbjct: 130 AEETLAEFLSKATGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVA 189

Query: 222 EILKDRP------------------RGSAI------LYALTTLAPARDFWLLRYTSVLED 257
           EILKDRP                   G  I       YA TTLA  RDFW+LRYTS LED
Sbjct: 190 EILKDRPSWYRDCRCVDVLHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLED 249

Query: 258 GSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 317
           GSLV+CERSL     GP+ P   +FVRAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSV
Sbjct: 250 GSLVICERSLTQSTGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSV 309

Query: 318 PEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFN 377
           PEVLRPLYES  +LAQK T+AALR +RQ+A E +     G GR+PA LR  SQRLSRGFN
Sbjct: 310 PEVLRPLYESPKILAQKMTIAALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFN 369

Query: 378 EAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLL 437
           +AVNGF D+GW++M +DG +DVT+  NSSP+KL+G +++ +  F A+   +LCAKASMLL
Sbjct: 370 DAVNGFPDDGWSLMSSDGAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLL 429

Query: 438 QNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTI 496
           QNVPPA+L+RFLREHRSEWAD  +D YSAAA++  P ++PG R G F GSQVILPLAHT+
Sbjct: 430 QNVPPALLVRFLREHRSEWADPGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTL 489

Query: 497 EHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDA 556
           EHEEF+EVI+LEG     ++ ++ RDM+LLQLCSG+DENA G CA+L+FAPID SFADDA
Sbjct: 490 EHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDA 549

Query: 557 PLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGN-RATNNYSTNSTC-MRSVMTIA 614
           PLLPSGFR+IPLD   +  S  RTLDLAS LE+G  G  RA+++  T+STC  RSV+TIA
Sbjct: 550 PLLPSGFRVIPLDGKTDAPSATRTLDLASTLEVGSGGTTRASSD--TSSTCNTRSVLTIA 607

Query: 615 FEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLAR 674
           F+F++E+H++E VA MARQYVR++++SVQRVA+A++PS +  Q   + P G+PEA TLAR
Sbjct: 608 FQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLAR 667

Query: 675 WICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLET 734
           WI  SYR + G DLL++ S+ ++S LK +W H+D++MCCSLKA PVFTFANQAGLDMLET
Sbjct: 668 WIGRSYRFHTGADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKAAPVFTFANQAGLDMLET 727

Query: 735 TLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKV 794
           TL+ALQDI+LEKI DD GRKAL  EFP+IMQQGFA L GG+C+SSMGRPVSYE+AVAWKV
Sbjct: 728 TLIALQDISLEKILDDDGRKALCTEFPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKV 787

Query: 795 LNEEETAHCICFMFINWSFV 814
           L++++T HC+ FMF+NWSFV
Sbjct: 788 LSDDDTPHCLAFMFVNWSFV 807


>gi|187609456|sp|Q5QMZ9.2|HOX29_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX29; AltName:
           Full=HD-ZIP protein HOX29; AltName: Full=Homeodomain
           transcription factor HOX29; AltName: Full=OSHB5;
           AltName: Full=OsHox29
 gi|187369569|dbj|BAG31403.1| class III homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
          Length = 868

 Score = 1100 bits (2846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/867 (64%), Positives = 673/867 (77%), Gaps = 67/867 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
            ++D  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+RECP L+N++PKQIKVWFQNRR
Sbjct: 6   AAMDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRR 65

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENG--------------- 115
           CREKQRKE+SRLQA+NRKLTAMNKLLMEENDRLQKQVSQLVY++G               
Sbjct: 66  CREKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPA 125

Query: 116 --YFRQHTQSTTLAT-KDTSCESVVTSGQHHLTP-----QHPPRDASPAGLLSIAEETLT 167
                       LAT  DTSCESVVTSG HH        Q PPRDASPAGL+SIAEETLT
Sbjct: 126 FPPQAAAAAGHQLATATDTSCESVVTSGHHHQQQQHNVVQPPPRDASPAGLMSIAEETLT 185

Query: 168 EFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR 227
           EFLSKATGTAVEW+QMPGMKPGPDS+GI+AISHGC+GVAARACGLVG+EP +VAEILKDR
Sbjct: 186 EFLSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDR 245

Query: 228 P------RGSAI------------------LYALTTLAPARDFWLLRYTSVLEDGSLVVC 263
           P      R   +                  LYA TTLAPARDFWLLRYTS+L+DGSLVVC
Sbjct: 246 PLWLRDCRSMDVVNVLPAGANGTIELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVC 305

Query: 264 ERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 323
           ERSL + Q GP+MP VQ F+R EMLPSG+LIRP + GGS+IHIVDHMDLEPWSVPEV+RP
Sbjct: 306 ERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDVGGSVIHIVDHMDLEPWSVPEVVRP 365

Query: 324 LYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGF 383
           LYESS ++AQK +MAALR LRQ+A E T+S + GWGR+PAALRALSQ+L+RGFNEA+NG 
Sbjct: 366 LYESSAMVAQKISMAALRYLRQVAHEDTRSVITGWGRQPAALRALSQKLTRGFNEALNGL 425

Query: 384 TDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPA 443
            D+GW+V+ +DG+DDV + VNSS  K++G N +F++G P VS  VLCAKASMLLQ+V P 
Sbjct: 426 ADDGWSVIESDGVDDVCISVNSS--KVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPP 483

Query: 444 ILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFME 503
            LL+FLREHRS+WAD+N+D + A+ +K   C+LP SR+G F  QVILPLAHT E EEF+E
Sbjct: 484 SLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSRLGGFSGQVILPLAHTFEPEEFLE 543

Query: 504 VIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGF 563
           VIKL G   + +D ++ RD+FLLQ+ +G++E++ GTC+ELIFAPIDASF+DD+PLLPSGF
Sbjct: 544 VIKL-GNASNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSPLLPSGF 602

Query: 564 RIIPLDSGKETSSPNRTLDLASALEIGPAGNR--------ATNNYSTNSTCMRSVMTIAF 615
           RIIP+DS  +TSSPN TLDLAS LE     +R             +  S+  ++VMTIAF
Sbjct: 603 RIIPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVNGGGGGCAAAAASSSSKAVMTIAF 662

Query: 616 EFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLR-----TPLGTPEAL 670
           +FAF+ H+Q+ VA MARQY+R+IISSVQR+A+ALS S +            +P+ TPEA 
Sbjct: 663 QFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAGAAAAQLSPV-TPEAA 721

Query: 671 TLARWICHSYRCYLGVDLLKS--SSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAG 728
           TL RWIC SYR + G +L+KS  ++  +ESILK +WHH  A++CCSLKA+PVFTFANQ+G
Sbjct: 722 TLPRWICQSYRFHFGDELIKSVDANSSNESILKAVWHHPSAILCCSLKAMPVFTFANQSG 781

Query: 729 LDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYER 788
           LDMLETTLVALQD+TLEK+FDD GRK L  E P IM+QG AC++GG+C+SS+GR  SYE+
Sbjct: 782 LDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQGMACMEGGVCVSSVGRAASYEK 841

Query: 789 AVAWKVLN-EEETAHCICFMFINWSFV 814
           AVAWKV++ +   AHCICFMFINW+F+
Sbjct: 842 AVAWKVVDGDGGGAHCICFMFINWTFL 868


>gi|449435534|ref|XP_004135550.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Cucumis
           sativus]
          Length = 844

 Score = 1097 bits (2836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/843 (65%), Positives = 652/843 (77%), Gaps = 39/843 (4%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           +D     +D  KYVRYTPEQV+ALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 7   RDSLNKQMDTSKYVRYTPEQVDALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVW 66

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQ QVS+LVYENGY RQ   + +
Sbjct: 67  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQTQVSRLVYENGYMRQQLHTAS 126

Query: 126 LATKDTSCESVVTSGQHHLT---PQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWV 181
             T D SCESVV SGQ H      +H  +DA+ PAGLL+IAEETL EFLSKATGTAV+WV
Sbjct: 127 GTTTDNSCESVVMSGQQHQQQNPTKHTQKDANNPAGLLAIAEETLAEFLSKATGTAVDWV 186

Query: 182 QMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR-------------- 227
           QM GMKPGPDS+GIVA+S  C+GVAARACGLV LEP +VAEILKDR              
Sbjct: 187 QMIGMKPGPDSIGIVAVSRNCNGVAARACGLVSLEPMKVAEILKDRLSWFRDCRCVDVLS 246

Query: 228 ----PRGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMP 277
                 G  I       YA TTLA ARDFW LRYT+ LEDGSLV+CERSL +   GP+ P
Sbjct: 247 VISTGNGGTIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPSGP 306

Query: 278 PVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTM 337
           P   FVRAEMLPSGYLIR CEGG S+IHIVDH+DL+ WSVPEVLRPLYES+ +LAQ+TT+
Sbjct: 307 PPSSFVRAEMLPSGYLIRACEGG-SLIHIVDHVDLDVWSVPEVLRPLYESTKILAQRTTV 365

Query: 338 AALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
           AALR +RQ+AQE +     G GR+PA LR  SQRL RGFN+AVNGF D+GW++M +DG++
Sbjct: 366 AALRYVRQIAQEASGEVQLGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMDSDGVE 425

Query: 398 DVTVLVNSSPDKLMG--LNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSE 455
           DVTV++NSSP+K +G   N S    F      VLCAKASMLLQNVPPA+L+RFLREHRSE
Sbjct: 426 DVTVVINSSPNKFLGSQYNTSLYPTF----GGVLCAKASMLLQNVPPALLVRFLREHRSE 481

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           WAD  +D YSAA +K    ++P +R G F G QVILPLAHT+E+EEF+EV++LEG    P
Sbjct: 482 WADYGVDAYSAACLKASAYAVPCARPGGFPGGQVILPLAHTVENEEFLEVVRLEGHAMFP 541

Query: 515 EDAIMP-RDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE 573
           E+A +  RDM+LLQLCSG+DEN VG CA+L+FAPID SFADDAPLLPSGFR+IPL+S  E
Sbjct: 542 EEAALGGRDMYLLQLCSGVDENTVGACAQLVFAPIDESFADDAPLLPSGFRVIPLESKAE 601

Query: 574 TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQ 633
                RTLDLAS LE+ P  NR        +  +RSV+TIAF+F FE+HM++ VA MARQ
Sbjct: 602 MPGATRTLDLASTLEVRPGTNRPGCETDVTNYNLRSVLTIAFQFTFENHMRDSVAAMARQ 661

Query: 634 YVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           YVR+++ SVQRVA+A++PS + SQ G ++   +PEALTLA+WI  SYR + G +L +  S
Sbjct: 662 YVRTVVGSVQRVAMAIAPSQLGSQIGPKSLPASPEALTLAQWITRSYRIHSGAELFQVES 721

Query: 694 EGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDH 751
           +  ++ILK LWHH+D ++CCS+K  A PVFTFANQAGLDMLETTLV+LQDITLEKI DD 
Sbjct: 722 QSGDAILKQLWHHSDTILCCSVKTNASPVFTFANQAGLDMLETTLVSLQDITLEKILDDA 781

Query: 752 GRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINW 811
           GRK L +EF +IMQQGFA L  GIC+SSMGRPVSYE+A+AWKVLN+++  HC+ FMF+NW
Sbjct: 782 GRKILCSEFSKIMQQGFAYLPAGICVSSMGRPVSYEQAIAWKVLNDDDVHHCLAFMFVNW 841

Query: 812 SFV 814
           SF+
Sbjct: 842 SFM 844


>gi|125524797|gb|EAY72911.1| hypothetical protein OsI_00785 [Oryza sativa Indica Group]
          Length = 886

 Score = 1096 bits (2835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 558/890 (62%), Positives = 675/890 (75%), Gaps = 92/890 (10%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 1   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 60

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENG----------------- 115
           EKQRKE+SRLQA+NRKLTAMNKLLMEENDRLQKQVSQLVY++G                 
Sbjct: 61  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 120

Query: 116 YFRQHTQSTTLAT-KDTSCESVVTSGQHHLTP-----QHPPRDASPAGLLSIAEETLTEF 169
                     LAT  DTSCESVVTSG HH        Q PPRDASPAGL+SIAEETLTEF
Sbjct: 121 PQAAAAAGHQLATATDTSCESVVTSGHHHQQQQHNVVQPPPRDASPAGLMSIAEETLTEF 180

Query: 170 LSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR-- 227
           LSKATGTAVEW+QMPGMKPGPDS+GI+AISHGC+GVAARACGLVG+EP +VAEILKDR  
Sbjct: 181 LSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPL 240

Query: 228 --------------PRGS---------------------------------AILYALTTL 240
                         P G+                                   LYA TTL
Sbjct: 241 WLRDCRSMDVVNVLPAGANGTIELLYMQARTHKPENSEPEPEILKLKFVFDLQLYAPTTL 300

Query: 241 APARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGG 300
           APARDFWLLRYTS+L+DGSLVVCERSL + Q GP+MP VQ F+R EMLPSG+LIRP +GG
Sbjct: 301 APARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGG 360

Query: 301 GSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGR 360
           GS+IHIVDHMDLEPWSVPEV+RPLYESS ++AQK +MAALR LRQ+A E T+S + GWGR
Sbjct: 361 GSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKISMAALRYLRQVAHEDTRSVITGWGR 420

Query: 361 RPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANG 420
           +PAALRALSQ+L+RGFNEA+NG  D+GW+V+ +DG+DDV + VNSS  K++G N +F++G
Sbjct: 421 QPAALRALSQKLTRGFNEALNGLADDGWSVIESDGVDDVCISVNSS--KVIGCNATFSSG 478

Query: 421 FPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSR 480
            P VS  VLCAKASMLLQ+V P  LL+FLREHRS+WAD+N+D + A+A+K   C+LP SR
Sbjct: 479 LPIVSTGVLCAKASMLLQDVSPPSLLQFLREHRSQWADSNLDAFFASAMKPNFCNLPMSR 538

Query: 481 VGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTC 540
           +G F  QVILPLAHT E EEF+EVIKL G   + +D ++ RD+FLLQ+ +G++E++ GTC
Sbjct: 539 LGGFSGQVILPLAHTFEPEEFLEVIKL-GNASNYQDTLVHRDLFLLQMYNGVEESSAGTC 597

Query: 541 AELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNY 600
           +ELIFAPIDASF+DD+PLLPSGFRIIP+DS  +TSSPN TLDLAS LE     +R +   
Sbjct: 598 SELIFAPIDASFSDDSPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVN 657

Query: 601 STNSTC--------MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALS-- 650
               TC         ++VMTIAF+FAF+ H+Q+ VA MARQY+R+IISSVQR+A+ALS  
Sbjct: 658 GGGGTCAAAAASSSSKAVMTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSS 717

Query: 651 ---PSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKS--SSEGSESILKNLWH 705
              P   ++ A   +P+ TPEA TL RWIC SYR + G +L+KS  ++  +ESILK +WH
Sbjct: 718 RLVPPGAAAAAAQLSPV-TPEAATLPRWICQSYRFHFGAELIKSVDANSSNESILKAVWH 776

Query: 706 HTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQ 765
           H  A++CCSLKA+PVFTFANQ+GLDMLETTLVALQD+TLEK+FDD GRK L  E P IM+
Sbjct: 777 HPSAILCCSLKAMPVFTFANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIME 836

Query: 766 QGFACLQGGICLSSMGRPVSYERAVAWKVLN-EEETAHCICFMFINWSFV 814
           QG AC++GG+C+SS+GR  SYE+AVAWKV++ +   AHCI FMFINW+F+
Sbjct: 837 QGMACMEGGVCVSSVGRAASYEKAVAWKVVDGDGGGAHCISFMFINWTFL 886


>gi|326504574|dbj|BAJ91119.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 880

 Score = 1096 bits (2834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/834 (64%), Positives = 652/834 (78%), Gaps = 33/834 (3%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D GKYVRYTPEQVEALER+Y+ECPKPSS+RRQQ+IR+CPIL NIEPKQIKVWFQNRRCR
Sbjct: 48  VDTGKYVRYTPEQVEALERVYNECPKPSSLRRQQIIRDCPILCNIEPKQIKVWFQNRRCR 107

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN---GYFRQHTQSTTLATK 129
           EKQRKE+SR+Q VNRKLTAMNKLLMEENDRLQKQVS+LVYEN      +    + + AT 
Sbjct: 108 EKQRKESSRMQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENVSAKSLKTKIHNASAATT 167

Query: 130 DTSCESVVTSGQHH-LTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
           DTSCESVVTSGQ   L    P RDA+ PAGLL+IAEETLT F+SKATGTAVEWVQM GMK
Sbjct: 168 DTSCESVVTSGQQQALAAPRPQRDANNPAGLLAIAEETLTAFMSKATGTAVEWVQMMGMK 227

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDS+GI+A+SH C GVAARACGLV LEPT+VAEILKDRP                   
Sbjct: 228 PGPDSIGIIAVSHNCIGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDILHVFPTGN 287

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I       YA TTLA  RDFW LRYT  LEDGSLV+CERSL     GP+ P    F+
Sbjct: 288 GGTIELIYMQTYAPTTLAAPRDFWTLRYTCGLEDGSLVICERSLTQSTGGPSGPNTPGFI 347

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYES  ++AQK T+AALR +
Sbjct: 348 RAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKIVAQKMTIAALRHI 407

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+A E +     G GR+PA LR  SQRLSRGFN+AV+GF D+GW+++ +DG +D+T+ V
Sbjct: 408 RQIAHESSGEIPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSLLTSDGAEDITITV 467

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NSSP+KL+G ++S +  F A+   +LCAKASML+Q+VPPA+L+RFLREHRSEWAD  +D 
Sbjct: 468 NSSPNKLVGSHISPSPLFSAIGGGILCAKASMLVQDVPPALLVRFLREHRSEWADPGVDA 527

Query: 464 YSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           YSAA+++  P ++PG R G F G+QVILPLAHT+EHEEF+EV++LEG G S ++ ++ RD
Sbjct: 528 YSAASLRASPYAVPGLRAGGFMGNQVILPLAHTLEHEEFLEVLRLEGHGFSHDEVLLARD 587

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           M+LLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD+  +  S  RTLD
Sbjct: 588 MYLLQLCSGVDENASGACAQLVFAPIDESFADDAPLLPSGFRVIPLDTKTDVPSATRTLD 647

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           LASALE+G  G    +  S    C RSV+TIAF+F+FE+H++E VA MARQYVR++++SV
Sbjct: 648 LASALEVGSGGALRGSGDSPGG-CTRSVLTIAFQFSFENHLRESVAAMARQYVRAVMASV 706

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKN 702
           QRVA+A++PS + SQ  L+ P G+PEALTLA WI  SYR + G ++  S +E ++S LK 
Sbjct: 707 QRVAMAIAPSRLGSQIQLKHPPGSPEALTLASWIGRSYRAHTGEEIRWSDTEEADSPLKL 766

Query: 703 LWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQ 762
           LW+H+DA++CCSLK  P+FTF N A LDMLETTLV LQDI+LE I DD GRKAL AEF +
Sbjct: 767 LWNHSDAILCCSLKPAPMFTFGNNAALDMLETTLVNLQDISLEAILDDEGRKALCAEFSK 826

Query: 763 IMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETA--HCICFMFINWSFV 814
           +MQQGFA L GG+C SSMGR  SYE+AVAWKV+ ++     HC+ FMF+NW+F+
Sbjct: 827 VMQQGFAYLPGGVCKSSMGRQASYEQAVAWKVVGDDVAGAPHCLAFMFVNWTFL 880


>gi|449488526|ref|XP_004158070.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Cucumis
           sativus]
          Length = 844

 Score = 1095 bits (2833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/843 (65%), Positives = 651/843 (77%), Gaps = 39/843 (4%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           +D     +D  KYVRYTPEQV+ALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 7   RDSLNKQMDTSKYVRYTPEQVDALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVW 66

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQ QVS+LVYENGY RQ   + +
Sbjct: 67  FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQTQVSRLVYENGYMRQQLHTAS 126

Query: 126 LATKDTSCESVVTSGQHHLT---PQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWV 181
             T D SCESVV SGQ H      +H  +DA+ PAGLL+IAEETL EFLSKATGTAV+WV
Sbjct: 127 GTTTDNSCESVVMSGQQHQQQNPTKHTQKDANNPAGLLAIAEETLAEFLSKATGTAVDWV 186

Query: 182 QMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR-------------- 227
           QM GMKPGPDS+GIVA+S  C+GVAARACGLV LEP +VAEILKDR              
Sbjct: 187 QMIGMKPGPDSIGIVAVSRNCNGVAARACGLVSLEPMKVAEILKDRLSWFRDCRCVDVLS 246

Query: 228 ----PRGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMP 277
                 G  I       YA TTLA ARDFW LRYT+ LEDGSLV+CERSL     GP+ P
Sbjct: 247 VISTGNGGTIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTLSTGGPSGP 306

Query: 278 PVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTM 337
           P   FVRAEMLPSGYLIR CEGG S+IHIVDH+DL+ WSVPEVLRPLYES+ +LAQ+TT+
Sbjct: 307 PPSSFVRAEMLPSGYLIRACEGG-SLIHIVDHVDLDVWSVPEVLRPLYESTKILAQRTTV 365

Query: 338 AALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
           AALR +RQ+AQE +     G GR+PA LR  SQRL RGFN+AVNGF D+GW++M +DG++
Sbjct: 366 AALRYVRQIAQEASGEVQLGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMDSDGVE 425

Query: 398 DVTVLVNSSPDKLMG--LNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSE 455
           DVTV++NSSP+K +G   N S    F      VLCAKASMLLQNVPPA+L+RFLREHRSE
Sbjct: 426 DVTVVINSSPNKFLGSQYNTSLYPTF----GGVLCAKASMLLQNVPPALLVRFLREHRSE 481

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           WAD  +D YSAA +K    ++P +R G F G QVILPLAHT+E+EEF+EV++LEG    P
Sbjct: 482 WADYGVDAYSAACLKASAYAVPCARPGGFPGGQVILPLAHTVENEEFLEVVRLEGHAMFP 541

Query: 515 EDAIMP-RDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE 573
           E+A +  RDM+LLQLCSG+DEN VG CA+L+FAPID SFADDAPLLPSGFR+IPL+S  E
Sbjct: 542 EEAALGGRDMYLLQLCSGVDENTVGACAQLVFAPIDESFADDAPLLPSGFRVIPLESKAE 601

Query: 574 TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQ 633
                RTLDLAS LE+ P  NR        +  +RSV+TIAF+F FE+HM++ VA MARQ
Sbjct: 602 MPGATRTLDLASTLEVRPGTNRPGCETDVTNYNLRSVLTIAFQFTFENHMRDSVAAMARQ 661

Query: 634 YVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           YVR+++ SVQRVA+A++PS + SQ G ++   +PEALTLA+WI  SYR + G +L +  S
Sbjct: 662 YVRTVVGSVQRVAMAIAPSQLGSQIGPKSLPASPEALTLAQWITRSYRIHSGAELFQVES 721

Query: 694 EGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDH 751
           +  ++ILK LWHH+D ++CCS+K  A PVFTFANQAGLDMLETTLV+LQDITLEKI DD 
Sbjct: 722 QSGDAILKQLWHHSDTILCCSVKTNASPVFTFANQAGLDMLETTLVSLQDITLEKILDDA 781

Query: 752 GRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINW 811
           GRK L +EF +IMQQGFA L  GIC+SSMGRPVSYE+A+AWKVLN+++  HC+ FMF+NW
Sbjct: 782 GRKILCSEFSKIMQQGFAYLPAGICVSSMGRPVSYEQAIAWKVLNDDDVHHCLAFMFVNW 841

Query: 812 SFV 814
           SF+
Sbjct: 842 SFM 844


>gi|383212091|dbj|BAM08932.1| class III homeobox-leucine zipper protein [Asparagus asparagoides]
          Length = 839

 Score = 1095 bits (2832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/847 (64%), Positives = 653/847 (77%), Gaps = 45/847 (5%)

Query: 1   MAMSCKDGKTGSLDN-----GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILS 55
           +A+    G +G L+      GKYVRYT EQVEALE++Y  CPKPSS+RRQQLIRE PILS
Sbjct: 5   VAIRTSSGSSGGLEKHMDSTGKYVRYTAEQVEALEKVYAVCPKPSSMRRQQLIRENPILS 64

Query: 56  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENG 115
           NIEPKQIKVWFQNRRCREKQRKE+SRLQAVNRKLTA+NKLLMEEN+RLQKQV+QLV+EN 
Sbjct: 65  NIEPKQIKVWFQNRRCREKQRKESSRLQAVNRKLTALNKLLMEENERLQKQVAQLVHENT 124

Query: 116 YFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKAT 174
           Y +Q  Q+ +L   DTSCESVVT      TPQ+P RDAS PAGLLS+AEETLTEFLSKAT
Sbjct: 125 YMKQQLQNVSLG-NDTSCESVVT------TPQNPLRDASNPAGLLSVAEETLTEFLSKAT 177

Query: 175 GTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------ 228
           GTAV+WVQMPGMKPGPDS+GIVAIS  CSGVAARACGLV LEPT+VAEILKDRP      
Sbjct: 178 GTAVDWVQMPGMKPGPDSIGIVAISQTCSGVAARACGLVSLEPTKVAEILKDRPSWFRDC 237

Query: 229 ------------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI 270
                        G  I      +YA TTLAPARD W LRYT+ LEDGSLVVCERSL+  
Sbjct: 238 RSLEVFTMFPAGNGGTIELVYMQMYAPTTLAPARDLWTLRYTTNLEDGSLVVCERSLRGS 297

Query: 271 QNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTV 330
             GP+      F RAEM PSG+LIRPC+GGGSI+HIVDH++LEPWSVPEVLRPLYESS V
Sbjct: 298 GGGPSAASAHQFARAEMFPSGFLIRPCDGGGSIVHIVDHLNLEPWSVPEVLRPLYESSRV 357

Query: 331 LAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTV 390
           LAQK T AALR +RQ+AQE++   V   GR+PA LR  SQ+LSRGFN+A+N F D+GW+V
Sbjct: 358 LAQKMTAAALRHIRQIAQEMSGEMVYPLGRQPAVLRTFSQKLSRGFNDAINSFVDDGWSV 417

Query: 391 MGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVS--NAVLCAKASMLLQNVPPAILLRF 448
           MG DG++DV V  NS     M    S AN   AV+  + V+CAKASMLLQNVPPA+L+RF
Sbjct: 418 MGCDGVEDVVVTTNS-----MKKTNSDANPVNAVTVPDGVVCAKASMLLQNVPPALLVRF 472

Query: 449 LREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKL 507
           LREHRSEWAD NID YSA+++K G    PG R   F GSQ I+ LAHT+E+EE +EV++L
Sbjct: 473 LREHRSEWADYNIDAYSASSLKAGSAFFPGLRSTRFSGSQTIMHLAHTVENEELLEVVRL 532

Query: 508 EGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIP 567
           EG   + ++AI+ RD+ LLQLCSG+DENA G+C +L+FAPID  F DDAPLLPSGFR+IP
Sbjct: 533 EGQALTQDEAILSRDIHLLQLCSGIDENAAGSCVQLVFAPIDELFPDDAPLLPSGFRVIP 592

Query: 568 LDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHV 627
           LD   +  + NRTLDLAS+LE+G A NR     + +   +RSV+TIAF+F +E H+QE V
Sbjct: 593 LDCRPDGLNSNRTLDLASSLEVGSAVNRTGGEAAPSDYSLRSVLTIAFQFPYEFHLQESV 652

Query: 628 ATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVD 687
           A MARQYVR+I+S+VQRV++AL+PS +   +  +   G+PEA+TLARWIC SY C+LG+D
Sbjct: 653 AAMARQYVRNIVSAVQRVSMALAPSQLGLSSSDKLLAGSPEAVTLARWICQSYNCHLGLD 712

Query: 688 LLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKI 747
           LL+S+ E  ES+LK LW H DA++CCSLK  PVFTFANQAGLDMLETTLVALQDITLEKI
Sbjct: 713 LLRSTEESGESLLKMLWDHPDAILCCSLKMQPVFTFANQAGLDMLETTLVALQDITLEKI 772

Query: 748 FDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFM 807
           FD+ GR AL ++F ++M+QG++ L GG+CLS MGR VSYE+AVAWKV++ E   HC+   
Sbjct: 773 FDEPGRAALCSDFSKLMEQGYSYLPGGVCLSGMGRSVSYEQAVAWKVMDLENNLHCLAIC 832

Query: 808 FINWSFV 814
           F+NWSFV
Sbjct: 833 FMNWSFV 839


>gi|18076736|emb|CAC84906.1| HD-Zip protein [Zinnia violacea]
          Length = 835

 Score = 1094 bits (2829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/835 (65%), Positives = 647/835 (77%), Gaps = 44/835 (5%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           LDNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 12  LDNGKYVRYTTEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 71

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKE+SRLQ VN+KL+AMNKLLMEENDRLQKQVSQLV ENGY RQ   + + AT D S
Sbjct: 72  EKQRKESSRLQTVNKKLSAMNKLLMEENDRLQKQVSQLVCENGYMRQQMHTGSAAT-DAS 130

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CESVV       TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 131 CESVVN------TPQHSLRDATNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 184

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           SVGI AIS  CSGVAARACGLV LEPT++ EILKDRP                   G  I
Sbjct: 185 SVGIFAISQSCSGVAARACGLVSLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTI 244

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                  +A TTLAPARDFW LRYT+ L++GSLVVCERSL     GP    V  FVR EM
Sbjct: 245 ELVYMQTFAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGSGAGPNPAAVAQFVRGEM 304

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPCEGGGS+IHIVDH++LE WSVPEVLRPLYESS V+AQK T+AALR +RQ+A
Sbjct: 305 LPSGYLIRPCEGGGSVIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIRQIA 364

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V G GR+PA LR LSQRLSRGFN+A+NGF+D+GW++M  DG++DV + VNS+ 
Sbjct: 365 QESSGEVVYGLGRQPAVLRTLSQRLSRGFNDAINGFSDDGWSLMNCDGVEDVIIAVNSTK 424

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
           +    +N S +  +      +LCAKASML Q+VPPA+L+RFLREHRSEWAD N+D YSAA
Sbjct: 425 NLNNSMNPSNSISYLG---GILCAKASMLFQDVPPAVLVRFLREHRSEWADFNVDAYSAA 481

Query: 468 AIKVGPC-SLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFL 525
           ++K   C + PG R   F GSQ+I+PL HTIEHEE +EV++LEG     ED    RD+ L
Sbjct: 482 SVKANSCNTYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHALGQEDPFTSRDIHL 541

Query: 526 LQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD----SGKET-SSPNRT 580
           LQLC+G+DENAVG C+EL+FAPID  F DDAPL+PSGFRIIPLD     GK    + +RT
Sbjct: 542 LQLCNGIDENAVGACSELVFAPIDEMFPDDAPLVPSGFRIIPLDPKSGGGKNALVTTHRT 601

Query: 581 LDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIIS 640
           LDL S+L++ PA N  + + ST  T  RSV+TIAF+F FE+++ E VATMARQYVRS+I+
Sbjct: 602 LDLTSSLDVTPANNHGSTDLSTCQTS-RSVLTIAFQFPFENNLAESVATMARQYVRSVIN 660

Query: 641 SVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESIL 700
           SVQRVA+A+SPS +S   G +    +PEA+TLA+WIC SY  +LG DLL S S   +S+L
Sbjct: 661 SVQRVAMAISPSGLSPCVGPKPSPTSPEAVTLAQWICQSYTYHLGADLLSSGSLVGDSLL 720

Query: 701 KNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEF 760
           K+LW H DA++CCSLK+LPVFTFANQAGLDMLETTLV+LQDITL+KIFDD GRKAL  EF
Sbjct: 721 KDLWQHQDAILCCSLKSLPVFTFANQAGLDMLETTLVSLQDITLDKIFDDSGRKALVPEF 780

Query: 761 PQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVL-NEEETAHCICFMFINWSFV 814
            +IMQQG+A L GGIC+S+MGR ++YE+AVAWKVL  +E T HC+ F F+NWSFV
Sbjct: 781 AKIMQQGYAHLPGGICMSTMGRHITYEQAVAWKVLAADESTVHCLAFSFVNWSFV 835


>gi|356528394|ref|XP_003532788.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Glycine max]
          Length = 849

 Score = 1092 bits (2825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/835 (64%), Positives = 644/835 (77%), Gaps = 35/835 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D GKYVRYTPEQVEALER+Y ECPKPSS RRQQ+IRECP+L+NIE KQIKVWFQNRRCR
Sbjct: 17  MDCGKYVRYTPEQVEALERVYIECPKPSSSRRQQIIRECPLLANIETKQIKVWFQNRRCR 76

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ--HTQSTTLATKD 130
           EKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVSQLVY+NG+ +Q  HT S T  T D
Sbjct: 77  EKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVYDNGFMKQQIHTASAT-TTTD 135

Query: 131 TSCESVVTSGQ-HHLTP--QHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 186
            SCESVV SGQ  H  P  QHP  DA+ PAGLL+IA+ETL  FLSKATGTAV WVQM GM
Sbjct: 136 NSCESVVVSGQRQHQNPKIQHPQWDANNPAGLLAIAQETLAAFLSKATGTAVNWVQMIGM 195

Query: 187 KPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------ 228
           KPGPDS+GIVA+S  CSGVAARACGLV LEPT+VAEILKDRP                  
Sbjct: 196 KPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCLNVLSVIPTG 255

Query: 229 RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHF 282
            G  I       YA TTLA ARDFW LRYT+ LEDGSLV+CERSL +   GPT P   +F
Sbjct: 256 NGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPAASNF 315

Query: 283 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ 342
           VRAEMLPSGYLIR CEGGGSI+HIVDH+DL+ WSVPEVLRPLYES   LAQK T AALR 
Sbjct: 316 VRAEMLPSGYLIRSCEGGGSIVHIVDHVDLDVWSVPEVLRPLYESPKFLAQKLTTAALRN 375

Query: 343 LRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           +RQ+AQE +     G GR+PA LR  SQRL +GFN+AVNGF D+GW++MGNDG++DVT+ 
Sbjct: 376 VRQIAQESSGEVQYGGGRQPAVLRTFSQRLCKGFNDAVNGFVDDGWSLMGNDGVEDVTIG 435

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNID 462
           +NSSP+K    + +  +  PA    VLCAKASMLLQNVPPA+L+RFLREHRSEWA+  +D
Sbjct: 436 INSSPNKFFSSHYN-TSMLPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWANYGVD 494

Query: 463 VYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPR 521
            YS+A +K  P ++P +R   F  S VI+PLAHTIEHEEF+EV+++EG    P+D  +  
Sbjct: 495 AYSSACLKASPYAVPCARPSGFPSSHVIIPLAHTIEHEEFLEVVRIEGNAFPPDDVALAC 554

Query: 522 DMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTL 581
           DM+L+QLCSG+DENA+G CA+L+FAPID SFADDA LLPSGFRIIPLD   +  +  RTL
Sbjct: 555 DMYLMQLCSGIDENAIGACAQLVFAPIDESFADDALLLPSGFRIIPLDPKTDGPASTRTL 614

Query: 582 DLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISS 641
           DLAS LE G    R+      N+  +RSV+TIAF+F FE+H++++VA MARQYVR+++ S
Sbjct: 615 DLASTLETGSGNARSAGESDLNNYNLRSVLTIAFQFTFENHLRDNVAVMARQYVRNVVRS 674

Query: 642 VQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILK 701
           VQRVA+A++PS IS+Q G ++  G PEALTLARWIC SY  +   +L    S   ++ILK
Sbjct: 675 VQRVAMAIAPSRISTQLGPKSLPGPPEALTLARWICKSYSLHTCTELFSVESTSGDAILK 734

Query: 702 NLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAE 759
            LWHH DA++CCS+K  A PVFTFANQAGLDMLETTLVALQDI L+K+ D+ GRK L  E
Sbjct: 735 QLWHHPDAILCCSVKTNASPVFTFANQAGLDMLETTLVALQDIMLDKVLDEAGRKFLCIE 794

Query: 760 FPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           F +IMQQGFA L  GIC+SSM RPVSYE+A+AWKVL+++++ HC+ F+F+NWSFV
Sbjct: 795 FSKIMQQGFAYLPAGICVSSMNRPVSYEQAIAWKVLDDDDSNHCLAFVFMNWSFV 849


>gi|449522211|ref|XP_004168121.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Cucumis
           sativus]
          Length = 841

 Score = 1091 bits (2821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/851 (66%), Positives = 645/851 (75%), Gaps = 47/851 (5%)

Query: 1   MAMSC---KDGKTGSL-----DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECP 52
           MAM+    ++  TGS+      +GKYVRYT EQVEALER+Y ECPKPSS+RRQQL+R+CP
Sbjct: 1   MAMAIAHHRESSTGSITRHLDSSGKYVRYTSEQVEALERVYAECPKPSSLRRQQLVRDCP 60

Query: 53  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 112
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKL AMNKLLMEENDRLQKQVSQLV 
Sbjct: 61  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSQLVC 120

Query: 113 ENGYFRQHTQST-TLATKDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFL 170
           ENG+ RQ   +    AT D SC+SVVT      TPQ   RDA+ PAGLLSIAEETL EFL
Sbjct: 121 ENGFMRQQLHTVPAAATADASCDSVVT------TPQPSRRDANNPAGLLSIAEETLAEFL 174

Query: 171 SKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-- 228
           SKATGTAV+WVQMPGMKPGPDSVGI AIS  C GVAARACGLV LEP+++AEILKDRP  
Sbjct: 175 SKATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPSKIAEILKDRPSW 234

Query: 229 ----------------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERS 266
                            G  I      +YA TTLAPARDFW LRYT  LE+GSLVVCERS
Sbjct: 235 FRDCRSLEVFTMFPAGNGGTIELVYTQVYAPTTLAPARDFWTLRYTITLENGSLVVCERS 294

Query: 267 LKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYE 326
           L     GP+      FVRAEMLPSGYLIRPCEGGGSIIHIVDH++LE W VPEVLRPLYE
Sbjct: 295 LSGSGAGPSEAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWHVPEVLRPLYE 354

Query: 327 SSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDE 386
           SS V+AQK T+AALR +RQ+AQE +   V G GR+PA LR  SQRLSRGFN+AVNGF D 
Sbjct: 355 SSKVVAQKMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDN 414

Query: 387 GWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILL 446
           GW+++  +G +DV + VNS+  K  G   + AN        VLCAKASMLLQNVPPA+L+
Sbjct: 415 GWSLINCEGAEDVVLTVNST--KNFGTTSNPANSL-TYPGGVLCAKASMLLQNVPPAVLV 471

Query: 447 RFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVI 505
           RFLREHRSEWAD NID YSAA +K    + PG R   F GSQ+I+PL HTIEHEE +EVI
Sbjct: 472 RFLREHRSEWADFNIDAYSAATLKANSYTYPGMRPTRFTGSQIIMPLGHTIEHEELLEVI 531

Query: 506 KLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRI 565
           +LEG     EDA + RD+ LLQ+CSG+DENAVG C+ELIFAPID  F DDAPLLPSGFRI
Sbjct: 532 RLEGHPMVQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLLPSGFRI 591

Query: 566 IPLDS-GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQ 624
           IPLDS   +     RTLDL S+LE+G +G   T   +++S   RSV+TIAF+F FES MQ
Sbjct: 592 IPLDSRTSDAKGSQRTLDLTSSLEVG-SGTSNTAGDASSSQSARSVLTIAFQFPFESSMQ 650

Query: 625 EHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYL 684
           ++VA MA QYVRS+ISSVQRVA+A+SPS      G +   G+PEALTLA WIC SY   L
Sbjct: 651 DNVANMAHQYVRSVISSVQRVAMAISPSGGGPALGPKLSPGSPEALTLAHWICKSYSLQL 710

Query: 685 GVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITL 744
           G +L+KS S   +S+LKNLW+H DA++CCSLK+LPVF FANQAGLDMLETTLVALQDITL
Sbjct: 711 GTELIKSDSLEGDSLLKNLWNHQDAILCCSLKSLPVFLFANQAGLDMLETTLVALQDITL 770

Query: 745 EKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLN-EEETAHC 803
           +KIFD+ GRKAL A+FP++MQQGFA L GGIC S+MGR VSYE+AVAWKVL  +E T HC
Sbjct: 771 DKIFDESGRKALCADFPKLMQQGFAYLPGGICASTMGRHVSYEQAVAWKVLEADETTVHC 830

Query: 804 ICFMFINWSFV 814
           + F FINWSFV
Sbjct: 831 LAFSFINWSFV 841


>gi|147783606|emb|CAN61612.1| hypothetical protein VITISV_013992 [Vitis vinifera]
          Length = 842

 Score = 1089 bits (2816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 554/833 (66%), Positives = 644/833 (77%), Gaps = 43/833 (5%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           LD+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 22  LDSGKYVRYTAEQVEALERVYLECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 81

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY RQ  Q+ + AT D S
Sbjct: 82  EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMRQQLQTASAATTDAS 141

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CESVVT      TPQH  RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 142 CESVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 195

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           SVGI AISH CSG  + +         +  EILKDRP                   G  +
Sbjct: 196 SVGIFAISHSCSGSGSSSMRSCKFRTLK--EILKDRPSWFRDCRSLEVFTMFPAGNGGTV 253

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 +YA TTLAPARDFW LRYT+ L++GSLVVCERSL     GP       FVRAEM
Sbjct: 254 ELLYTQIYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGSGAGPNTAAAAQFVRAEM 313

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPCEGGGSIIHIVDH++LE WSVPEVLRPLYESS V+AQK T+AALR +RQ+A
Sbjct: 314 LPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRVVAQKMTIAALRYIRQIA 373

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V G GR+PA LR  SQRLSRGFN+A+NGF D+GW++M  DG +DV + VNS+ 
Sbjct: 374 QETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSLMSCDGAEDVIIAVNSTK 433

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
           +     N + +   P     VLCAKASMLLQNVPPA+L+RFLREHRSEWAD ++D YSAA
Sbjct: 434 NLNTTSNPANSLSLPG---GVLCAKASMLLQNVPPAVLVRFLREHRSEWADFSVDAYSAA 490

Query: 468 AIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
           ++K  P S PG R   F GSQ+I+PL HTIEHEE +EVI+LEG   + EDA M RD+ LL
Sbjct: 491 SLKASPYSYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAHEDAFMSRDIHLL 550

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSG----KETSSPNRTLD 582
           Q+CSG+DENAVG C+EL+FAPID  F DDAPLLPSGFRIIPLDS     +ET + +RTLD
Sbjct: 551 QICSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSKSGDTQETLTTHRTLD 610

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           L S+LE+GPA N+A  + S++    RSV+TIAF+F FES++Q++VATMARQYVRS+ISSV
Sbjct: 611 LTSSLEVGPATNQAAGD-SSSCYNTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISSV 669

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKN 702
           QRVA+A+SPS +    G +   G+PEALTLA WIC SY  ++G +LL+S S G +S+LKN
Sbjct: 670 QRVAMAISPSGLGPAVGPKLSAGSPEALTLAHWICQSYSYHVGAELLRSDSVGGDSVLKN 729

Query: 703 LWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQ 762
           LWHH DA++CCSLK+LPV  FANQAGLDMLETTLVALQDI+L+KIFD+ GRK L A+F +
Sbjct: 730 LWHHQDAILCCSLKSLPVLIFANQAGLDMLETTLVALQDISLDKIFDESGRKGLCADFAK 789

Query: 763 IMQQGFACLQGGICLSSMGRPVSYERAVAWKVL-NEEETAHCICFMFINWSFV 814
           IMQQGFA L  GIC+S+MGR VSYE+A+AWKVL  EE T HC+ F FINWSFV
Sbjct: 790 IMQQGFAYLPAGICMSTMGRHVSYEQAIAWKVLAAEENTVHCLAFSFINWSFV 842


>gi|356512574|ref|XP_003524993.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Glycine max]
          Length = 853

 Score = 1088 bits (2814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/836 (63%), Positives = 644/836 (77%), Gaps = 35/836 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D GKYVRYTPEQVEALER+Y ECPKPSS RRQQ+IRECP+L+NIE KQIKVWFQNRRCR
Sbjct: 19  MDCGKYVRYTPEQVEALERVYVECPKPSSSRRQQIIRECPLLANIETKQIKVWFQNRRCR 78

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATK--- 129
           EKQRKEASRLQ VNRKL++MNKLLMEENDRLQKQVSQLVY+NG+ +Q   + +  T    
Sbjct: 79  EKQRKEASRLQTVNRKLSSMNKLLMEENDRLQKQVSQLVYDNGFMKQQIHTASATTTTTT 138

Query: 130 DTSCESVVTSGQH---HLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPG 185
           D SCESVV SGQH   +   QHP  DA+ PAGLL+IA+ETL EFLSKATGTAV WVQM G
Sbjct: 139 DNSCESVVVSGQHQPQNPKTQHPQWDANNPAGLLAIAQETLVEFLSKATGTAVNWVQMIG 198

Query: 186 MKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP----------------- 228
           MKPGPDS+GIVA+S  CSGVAARACGLV LEPT+VAEILKDRP                 
Sbjct: 199 MKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCLNVLSVVSA 258

Query: 229 -RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQH 281
             G  I       YA TTLA ARDFW LRY++ LEDGSLV+CERSL +   GPT P   +
Sbjct: 259 GNGGTIELMYMQTYAPTTLAAARDFWTLRYSTSLEDGSLVICERSLTSSTGGPTGPAASN 318

Query: 282 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALR 341
           F+RAEMLPSGYLIR CEGGGSIIHIVDH+DL+ WSVPEVLRPLYES   LAQK T AALR
Sbjct: 319 FIRAEMLPSGYLIRSCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESPKFLAQKLTTAALR 378

Query: 342 QLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
             RQ+AQE +     G GR+PA LR  SQRL +GFN+AVNGF D+GW++MGNDG++DVT+
Sbjct: 379 HARQIAQESSGDVHYGGGRQPAVLRTFSQRLCKGFNDAVNGFVDDGWSLMGNDGVEDVTI 438

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNI 461
            +NSSP+K  G + +  +  PA    V+CAKASMLLQNVPPA+L+RFLREHRSEWA+  +
Sbjct: 439 AINSSPNKFFGSHYN-TSMLPAFGGGVMCAKASMLLQNVPPALLVRFLREHRSEWANYEV 497

Query: 462 DVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
           D YS+A +K  P ++P +R   F  S VI+PLAHTIEHEEF+EV+++EG    P+D    
Sbjct: 498 DAYSSACLKASPYAVPCARPSGFPSSHVIIPLAHTIEHEEFLEVVRIEGNAFPPDDVAWA 557

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRT 580
            DM+L+QLCSG+DENA+G CA+L+FAPID SFADDA LLPSGFRIIPLD   +  +  RT
Sbjct: 558 CDMYLMQLCSGIDENAIGACAQLVFAPIDESFADDALLLPSGFRIIPLDPKTDGLASTRT 617

Query: 581 LDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIIS 640
           LDLAS LE G    R+     +N+  +RSV+TIAF+F FE+H++++VA MARQYVR+++ 
Sbjct: 618 LDLASTLETGSGNARSAGESDSNNYNLRSVLTIAFQFTFENHLRDNVAVMARQYVRNVVR 677

Query: 641 SVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESIL 700
           SVQRVA+A++PS +S+Q G ++  G PEALTLARWIC SYR +   +L    S   ++IL
Sbjct: 678 SVQRVAMAIAPSRLSTQLGPKSFPGPPEALTLARWICRSYRLHTCTELFSVESTSGDAIL 737

Query: 701 KNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFA 758
           K LWHH DA++CCS+K  A PVFTFANQAGLDMLETTLVALQDI L+K+ D+ GRK L  
Sbjct: 738 KQLWHHPDAILCCSVKTDASPVFTFANQAGLDMLETTLVALQDIMLDKVLDEAGRKVLCI 797

Query: 759 EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           EF +IMQQGFA L  GIC+SSM RPVSYE+A+AWKVL+++++ HC+ F+F+NWSFV
Sbjct: 798 EFSKIMQQGFAYLPAGICVSSMNRPVSYEQAIAWKVLDDDDSNHCLAFVFMNWSFV 853


>gi|56202112|dbj|BAD73204.1| putative homeobox leucine-zipper protein [Oryza sativa Japonica
           Group]
          Length = 886

 Score = 1087 bits (2811), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/890 (62%), Positives = 672/890 (75%), Gaps = 92/890 (10%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 1   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 60

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYF--------------- 117
           EKQRKE+SRLQA+NRKLTAMNKLLMEENDRLQKQVSQLVY++G                 
Sbjct: 61  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 120

Query: 118 --RQHTQSTTLAT-KDTSCESVVTSGQHHLTP-----QHPPRDASPAGLLSIAEETLTEF 169
                     LAT  DTSCESVVTSG HH        Q PPRDASPAGL+SIAEETLTEF
Sbjct: 121 PQAAAAAGHQLATATDTSCESVVTSGHHHQQQQHNVVQPPPRDASPAGLMSIAEETLTEF 180

Query: 170 LSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR-- 227
           LSKATGTAVEW+QMPGMKPGPDS+GI+AISHGC+GVAARACGLVG+EP +VAEILKDR  
Sbjct: 181 LSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPL 240

Query: 228 --------------PRGS---------------------------------AILYALTTL 240
                         P G+                                   LYA TTL
Sbjct: 241 WLRDCRSMDVVNVLPAGANGTIELLYMQARTHKPENSEPEPEILKLKFVFDLQLYAPTTL 300

Query: 241 APARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGG 300
           APARDFWLLRYTS+L+DGSLVVCERSL + Q GP+MP VQ F+R EMLPSG+LIRP + G
Sbjct: 301 APARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDVG 360

Query: 301 GSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGR 360
           GS+IHIVDHMDLEPWSVPEV+RPLYESS ++AQK +MAALR LRQ+A E T+S + GWGR
Sbjct: 361 GSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKISMAALRYLRQVAHEDTRSVITGWGR 420

Query: 361 RPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANG 420
           +PAALRALSQ+L+RGFNEA+NG  D+GW+V+ +DG+DDV + VNSS  K++G N +F++G
Sbjct: 421 QPAALRALSQKLTRGFNEALNGLADDGWSVIESDGVDDVCISVNSS--KVIGCNATFSSG 478

Query: 421 FPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSR 480
            P VS  VLCAKASMLLQ+V P  LL+FLREHRS+WAD+N+D + A+ +K   C+LP SR
Sbjct: 479 LPIVSTGVLCAKASMLLQDVSPPSLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSR 538

Query: 481 VGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTC 540
           +G F  QVILPLAHT E EEF+EVIKL G   + +D ++ RD+FLLQ+ +G++E++ GTC
Sbjct: 539 LGGFSGQVILPLAHTFEPEEFLEVIKL-GNASNYQDTLVHRDLFLLQMYNGVEESSAGTC 597

Query: 541 AELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNR----- 595
           +ELIFAPIDASF+DD+PLLPSGFRIIP+DS  +TSSPN TLDLAS LE     +R     
Sbjct: 598 SELIFAPIDASFSDDSPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVN 657

Query: 596 ---ATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPS 652
                   +  S+  ++VMTIAF+FAF+ H+Q+ VA MARQY+R+IISSVQR+A+ALS S
Sbjct: 658 GGGGGCAAAAASSSSKAVMTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSS 717

Query: 653 NISSQAGLR-----TPLGTPEALTLARWICHSYRCYLGVDLLKS--SSEGSESILKNLWH 705
            +            +P+ TPEA TL RWIC SYR + G +L+KS  ++  +ESILK +WH
Sbjct: 718 RLVPPGAGAAAAQLSPV-TPEAATLPRWICQSYRFHFGDELIKSVDANSSNESILKAVWH 776

Query: 706 HTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQ 765
           H  A++CCSLKA+PVFTFANQ+GLDMLETTLVALQD+TLEK+FDD GRK L  E P IM+
Sbjct: 777 HPSAILCCSLKAMPVFTFANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIME 836

Query: 766 QGFACLQGGICLSSMGRPVSYERAVAWKVLN-EEETAHCICFMFINWSFV 814
           QG AC++GG+C+SS+GR  SYE+AVAWKV++ +   AHCICFMFINW+F+
Sbjct: 837 QGMACMEGGVCVSSVGRAASYEKAVAWKVVDGDGGGAHCICFMFINWTFL 886


>gi|60327621|gb|AAX19050.1| class III HD-Zip protein 1 [Populus trichocarpa]
          Length = 855

 Score = 1086 bits (2809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/849 (64%), Positives = 650/849 (76%), Gaps = 65/849 (7%)

Query: 14  DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCRE 73
           DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPIL+NIEPKQIKVWFQNRRCRE
Sbjct: 24  DNGKYVRYTSEQVEALERVYAECPKPSSLRRQQLIRECPILANIEPKQIKVWFQNRRCRE 83

Query: 74  KQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
           KQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENG+ +Q  Q+   A   +  
Sbjct: 84  KQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMQQQLQTAPAAADASCD 143

Query: 134 ESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDS 192
            +V T       PQH  RDA+ PAGLLS+AEETL EFLSKATGTAV+WVQMPGMKPGPDS
Sbjct: 144 SAVTT-------PQHSLRDANNPAGLLSLAEETLAEFLSKATGTAVDWVQMPGMKPGPDS 196

Query: 193 VGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR----------------PRGS----- 231
           VGI AIS  CSGVAARACGLV LEPT++AEILKDR                P G+     
Sbjct: 197 VGIFAISQRCSGVAARACGLVSLEPTKLAEILKDRQSWFRDCRNLEVFTVFPAGNGGTIE 256

Query: 232 ---AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
              + +YA TTLAPARDFW LRYT  LE+GSLVVCERSL     GP       FVRAEML
Sbjct: 257 LLYSQIYAPTTLAPARDFWTLRYTINLENGSLVVCERSLSGSGAGPNAAAAAQFVRAEML 316

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQ 348
           PSGYLIRPCEGGGSIIHIVDH++L+ WSVPEVLRPLYESS  +AQK T+ ALR +RQ+A 
Sbjct: 317 PSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPLYESSKAVAQKVTITALRHVRQIAH 376

Query: 349 EVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           E +   V G GR+PA LR  SQRLSRGFN+A+NGF D+GW++M +DG +DV + VN++ +
Sbjct: 377 ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSLMNSDGAEDVIIAVNTTKN 436

Query: 409 KLMGLN----LSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVY 464
            +   N    LSF  G       +LCAKASMLLQNVPPA+L+RFLREHRSEWAD ++D Y
Sbjct: 437 LISANNPAHSLSFLGG-------ILCAKASMLLQNVPPAVLVRFLREHRSEWADFSVDAY 489

Query: 465 SAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDM 523
           SAA++K G  + PG R   F GSQ+I+PL HTIE EE +EVI+LEG   + EDA + RD+
Sbjct: 490 SAASLKAGSYAYPGMRSMRFTGSQIIMPLGHTIEQEELLEVIRLEGHSFAQEDAFVSRDI 549

Query: 524 FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS----GKETSSPNR 579
            LLQ+CSG+DENAVG C+EL+FAPID  F DDAPLLPSGFR+IPL+S     +E  + NR
Sbjct: 550 HLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLLPSGFRVIPLESKTKDAQEALTTNR 609

Query: 580 TLDLASALEIGPAGNRATNNYSTNSTC-MRSVMTIAFEFAFESHMQEHVATMARQYVRSI 638
           TLDL S+LE+GP  N A+ +    S+C +RSV+TIAF+F FES++Q++VATMARQYVRS+
Sbjct: 610 TLDLTSSLEVGPVTNHASVD---GSSCHLRSVLTIAFQFPFESNLQDNVATMARQYVRSV 666

Query: 639 ISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSY--------RCY-LGVDLL 689
           ISSVQRVA A+SPS ++   G +   G+PEALTLA WIC SY         CY LG +LL
Sbjct: 667 ISSVQRVATAISPSGLNPALGPKLSAGSPEALTLAHWICQSYWQVLPQVSSCYHLGAELL 726

Query: 690 KSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFD 749
           +S S G +S+LK+LWHH DA++CCSL+ALPVF FANQAGLDMLETTLVALQDITL+KIFD
Sbjct: 727 RSDSVGGDSVLKHLWHHPDAILCCSLEALPVFIFANQAGLDMLETTLVALQDITLDKIFD 786

Query: 750 DHGRKALFAEFPQIMQQ---GFACLQGGICLSSMGRPVSYERAVAWKVL-NEEETAHCIC 805
           + GRKALF +F ++MQQ   GFACL  GIC+S+MGR VSYE+AV+WKVL  EE T HCI 
Sbjct: 787 ESGRKALFTDFAKLMQQANNGFACLPAGICMSTMGRNVSYEQAVSWKVLAAEENTVHCIA 846

Query: 806 FMFINWSFV 814
           F F+NWSF+
Sbjct: 847 FSFVNWSFL 855


>gi|18076740|emb|CAC84277.1| HD-Zip protein [Zinnia violacea]
          Length = 849

 Score = 1084 bits (2804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 547/837 (65%), Positives = 640/837 (76%), Gaps = 47/837 (5%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           LDNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 25  LDNGKYVRYTTEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKE+SRLQ VN+KL+AMNKLLMEENDRLQKQVSQLV ENGY RQ   + + AT D S
Sbjct: 85  EKQRKESSRLQTVNKKLSAMNKLLMEENDRLQKQVSQLVCENGYMRQQLHTGSAAT-DAS 143

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CESV+T      TPQ   RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 144 CESVLT------TPQQSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           SVGI AIS  CSGVAARACGLV LEPT++ EILKDRP                   G  I
Sbjct: 198 SVGIFAISQSCSGVAARACGLVSLEPTKIVEILKDRPSWFRDCRNLEVFTMFPAGNGGTI 257

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 ++A TTLAPARDFW LRYT+ LE+GSLVVCERSL     GP       FVR EM
Sbjct: 258 ELVYTQIFAPTTLAPARDFWTLRYTTTLENGSLVVCERSLSGSGAGPNPAAASQFVRGEM 317

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPCEGGGSI+HIVDH++LE WSVPEVLRPLYESS V+AQK T+AALR +RQ+A
Sbjct: 318 LPSGYLIRPCEGGGSIVHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIRQIA 377

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V G GR+PA LR LSQRLSRGFN+AVNGF+D+GW++M  DG +DV V VNS+ 
Sbjct: 378 QESSGEVVYGVGRQPAVLRTLSQRLSRGFNDAVNGFSDDGWSLMNCDGAEDVIVAVNSTK 437

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
           +    +N S +   P     ++CAKASML +NVPP +L+RFLREHRSEWAD N+D YSAA
Sbjct: 438 NLNNSMNSSTS---PPYLGGIICAKASMLFENVPPGVLVRFLREHRSEWADFNVDAYSAA 494

Query: 468 AIKVGPC-SLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFL 525
           ++K  P  + PG R   F GSQ+I+PL HTIEHEE +EV++LEG     ED  M RD+ L
Sbjct: 495 SVKANPYNTYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGQALGQEDPFMSRDIHL 554

Query: 526 LQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPN------- 578
           LQLC+G+DEN+VG C+ELIFAPID  F DDAPL+PSGFRIIPLD  K   + N       
Sbjct: 555 LQLCNGIDENSVGACSELIFAPIDEMFPDDAPLIPSGFRIIPLDP-KSVDAKNALVTTHR 613

Query: 579 RTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSI 638
            TLDL S+L++ P  N  + + ST  T  RSV+TI F+F FE+ + E VATMARQYVRS+
Sbjct: 614 TTLDLTSSLDVTPTPNHGSTDVSTCQT-TRSVLTITFQFPFENSLAESVATMARQYVRSV 672

Query: 639 ISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSES 698
           I+SVQRVA+A+SPS +S   G +   G+PEALTLA+WIC SY  +LG DLL S S   ES
Sbjct: 673 INSVQRVAMAISPSGLSPCVGPKPSPGSPEALTLAQWICQSYMYHLGADLLSSGSVVGES 732

Query: 699 ILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFA 758
           +LK+LW H DA++CCSLK+ PVF FANQ+GLDMLETTLV+LQDITL+K+FDD GRKAL  
Sbjct: 733 LLKDLWQHQDAILCCSLKSQPVFIFANQSGLDMLETTLVSLQDITLDKMFDDSGRKALVP 792

Query: 759 EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVL-NEEETAHCICFMFINWSFV 814
           EF +IMQQG+A L GGIC+S+MGR V+YE+AVAWKVL  +E T HC+ F F+NWSF+
Sbjct: 793 EFAKIMQQGYAHLPGGICMSTMGRHVTYEQAVAWKVLAADESTVHCLAFSFVNWSFL 849


>gi|242042549|ref|XP_002468669.1| hypothetical protein SORBIDRAFT_01g050000 [Sorghum bicolor]
 gi|241922523|gb|EER95667.1| hypothetical protein SORBIDRAFT_01g050000 [Sorghum bicolor]
          Length = 840

 Score = 1084 bits (2803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/832 (63%), Positives = 641/832 (77%), Gaps = 36/832 (4%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           K   +D+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPKQIKVWFQN
Sbjct: 19  KVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQN 78

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLAT 128
           RRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + RQ  Q+T+LA 
Sbjct: 79  RRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTSLA- 137

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            DTSCES VT      TP +P RDAS P+GLL+IAEET TEFLSKATGTA++WVQMPGMK
Sbjct: 138 NDTSCESNVT------TPPNPIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 191

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDSVGIVAISHGC GVAARACGLV LEPT+V EILKDRP                   
Sbjct: 192 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSWFRDCRSLEVFTMFPAGN 251

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  +      +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP     Q FV
Sbjct: 252 GGTVELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASAQQFV 311

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T  ALR L
Sbjct: 312 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 371

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV V  
Sbjct: 372 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVVAC 431

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NS+       N     G P     ++CAKASMLLQ+VPPA+L+RFLREHRSEWAD N+D 
Sbjct: 432 NSTKKIRNNSNAGITFGAPG---GIICAKASMLLQSVPPAVLVRFLREHRSEWADYNMDA 488

Query: 464 YSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           Y A+++K   CSLPG R   F G Q+I+PLAHT+E+EE +EV++LEG   + ++A++ RD
Sbjct: 489 YLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRD 548

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           + LLQLC+G+DE +VG+  +L+FAPID  F DDAPL+ SGFR+IPLD   +  +  RTLD
Sbjct: 549 IHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDMKTDGVASGRTLD 608

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           LAS+L++G A  +A+ + S +   +RSV+TIAF+F +E H+Q+ VATMARQYVR ++S+V
Sbjct: 609 LASSLDVGSAAPQASGDASPDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRGVVSAV 668

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKN 702
           QRV++A+SPS     AG R   G PEA TLARW+C SY  +LG++LL  S E  E++LK 
Sbjct: 669 QRVSMAISPSQSGLNAGQRMLSGFPEAATLARWVCQSYHYHLGLELLNQSDEAGEALLKM 728

Query: 703 LWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQ 762
           LWHH DAV+CCS K  P+FTFAN+AGLDMLET+LVALQD+TL+KIFD+ GRKA+F++  +
Sbjct: 729 LWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKAIFSDISK 788

Query: 763 IMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +M+QG+A L  G+C+S MGR VS+++AVAWKVL E+   HC+ F F+NWSFV
Sbjct: 789 LMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNVHCLAFCFVNWSFV 840


>gi|24417149|dbj|BAC22513.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 846

 Score = 1083 bits (2802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/838 (65%), Positives = 639/838 (76%), Gaps = 56/838 (6%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           LDNGKYVRYT EQVEALER+Y ECPKPSS++RQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 29  LDNGKYVRYTAEQVEALERVYAECPKPSSLKRQQLIRECPILSNIEPKQIKVWFQNRRCR 88

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEASRLQ VNRKL+AMNKLLMEENDRLQKQVSQLVYENGY RQ    T  +  D S
Sbjct: 89  EKQRKEASRLQMVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYMRQQLH-TAQSVTDAS 147

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CES VT      TPQH  RDA+ PAGLLSIAEETLTEFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 148 CESAVT------TPQHSLRDANNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPD 201

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR----------------PRGSA--- 232
           SVGI AIS  CSGVAARACGLV LEPT++ EILKDR                P G+    
Sbjct: 202 SVGIFAISQSCSGVAARACGLVSLEPTKIVEILKDRTSWFRDCRNLEVLTMLPAGNGGTI 261

Query: 233 -----ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 +YA TTLAPARDFW LRYT+ LE+GSLVVCERSL     GP       FVR EM
Sbjct: 262 ELVYTQVYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGPGGGPNAAAASQFVRGEM 321

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPC+GGGSIIHIVDH++LEPWS PEVLRPLYESS V+AQK T+AALR +RQ+A
Sbjct: 322 LPSGYLIRPCDGGGSIIHIVDHLNLEPWSAPEVLRPLYESSKVVAQKMTIAALRYIRQIA 381

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V G GR+PA LR LSQRLSRGFN+A+NGF D+GW++M  DG +DV V +NS+ 
Sbjct: 382 QESSGEVVYGLGRQPAILRTLSQRLSRGFNDAINGFNDDGWSLMNCDGAEDVIVSINSTK 441

Query: 408 DKLMGLN----LSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           +     N    LSF  G       VLCAKASML  NVPPA+L+RFLREHRSEWAD N+D 
Sbjct: 442 NLNTSTNSSNPLSFLGG-------VLCAKASMLFHNVPPAVLVRFLREHRSEWADFNVDA 494

Query: 464 YSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           YSAA++K  P    G R   F GSQVI+PL  TIEHEE +EVI+LEG     ED  + RD
Sbjct: 495 YSAASVKASPYGYQGIRPTRFTGSQVIMPLGQTIEHEEMLEVIRLEGHAVGQEDPFVSRD 554

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPL-----DSGKETSSP 577
           + LLQLCSG+DENAVG C+EL+FAPID  F DDAPL+PSGFRIIPL     D      + 
Sbjct: 555 IHLLQLCSGIDENAVGACSELVFAPIDEMFPDDAPLIPSGFRIIPLEPKSGDPKDAAGTT 614

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
           +RTLDL S+LE+G    ++TN+ S+++  MRSV+TIAF+F FE+++ + VATMARQYVRS
Sbjct: 615 HRTLDLTSSLEVG----QSTNHGSSDN--MRSVLTIAFQFPFENNLADSVATMARQYVRS 668

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
           +I+SVQRVA+A+SPS +S     +    +PEALTLA+WIC SY  +LG DLL S S   +
Sbjct: 669 VINSVQRVAMAISPSGLSPSLAPKLSPSSPEALTLAQWICQSYTYHLGTDLLTSGSVVGD 728

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
           S+LK+LW H DA++CCSLK+ PVF FANQAGLDMLETT VALQDITL+K+FD+ GRKALF
Sbjct: 729 SLLKDLWQHQDAILCCSLKSPPVFIFANQAGLDMLETTFVALQDITLDKMFDEAGRKALF 788

Query: 758 AEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVL-NEEETAHCICFMFINWSFV 814
            EF +IMQQG+A L GGIC+S+MGR +SYE+A+AWKVL  +E T H + F F+NWSFV
Sbjct: 789 PEFAKIMQQGYAYLPGGICMSTMGRHISYEQAIAWKVLAGDETTVHRLAFSFVNWSFV 846


>gi|24417151|dbj|BAC22514.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 848

 Score = 1083 bits (2801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 547/837 (65%), Positives = 640/837 (76%), Gaps = 47/837 (5%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           LDNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 24  LDNGKYVRYTTEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 83

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKE+SRLQ VN+KL+AMNKLLMEENDRLQKQVSQLV ENGY RQ   + + AT D S
Sbjct: 84  EKQRKESSRLQTVNKKLSAMNKLLMEENDRLQKQVSQLVCENGYMRQQLHTGSAAT-DAS 142

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CESV+T      TPQ   RDA+ PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 143 CESVLT------TPQQSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 196

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           SVGI AIS  CSGVAARACGLV LEPT++ EILKDRP                   G  I
Sbjct: 197 SVGIFAISQSCSGVAARACGLVSLEPTKIVEILKDRPSWFRDCRNLEVFTMFPAGNGGTI 256

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 ++A TTLAPARDFW LRYT+ LE+GSLVVCERSL     GP       FVR EM
Sbjct: 257 ELVYTQIFAPTTLAPARDFWTLRYTTTLENGSLVVCERSLSGSGAGPNPAAASQFVRGEM 316

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPCEGGGSI+HIVDH++LE WSVPEVLRPLYESS V+AQK T+AALR +RQ+A
Sbjct: 317 LPSGYLIRPCEGGGSIVHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIRQIA 376

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V G GR+PA LR LSQRLSRGFN+AVNGF+D+GW++M  DG +DV V VNS+ 
Sbjct: 377 QESSGEVVYGVGRQPAVLRTLSQRLSRGFNDAVNGFSDDGWSLMNCDGAEDVIVAVNSTK 436

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
           +    +N S +   P     ++CAKASML +NVPP +L+RFLREHRSEWAD N+D YSAA
Sbjct: 437 NLNNSMNSSTS---PPYLGGIICAKASMLFENVPPGVLVRFLREHRSEWADFNVDAYSAA 493

Query: 468 AIKVGPC-SLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFL 525
           ++K  P  + PG R   F GSQ+I+PL HTIEHEE +EV++LEG     ED  M RD+ L
Sbjct: 494 SVKANPYNTYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGQALGQEDPFMSRDIHL 553

Query: 526 LQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPN------- 578
           LQLC+G+DEN+VG C+ELIFAPID  F DDAPL+PSGFRIIPLD  K   + N       
Sbjct: 554 LQLCNGIDENSVGACSELIFAPIDEMFPDDAPLIPSGFRIIPLDP-KSVDAKNALVTTHR 612

Query: 579 RTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSI 638
            TLDL S+L++ P  N  + + ST  T  RSV+TI F+F FE+ + E VATMARQYVRS+
Sbjct: 613 TTLDLTSSLDVTPTPNHGSTDVSTCQT-TRSVLTITFQFPFENSLAESVATMARQYVRSV 671

Query: 639 ISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSES 698
           I+SVQRVA+A+SPS +S   G +   G+PEALTLA+WIC SY  +LG DLL S S   ES
Sbjct: 672 INSVQRVAMAISPSGLSPCVGPKPSPGSPEALTLAQWICQSYMYHLGADLLSSGSVVGES 731

Query: 699 ILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFA 758
           +LK+LW H DA++CCSLK+ PVF FANQ+GLDMLETTLV+LQDITL+K+FDD GRKAL  
Sbjct: 732 LLKDLWQHQDAILCCSLKSQPVFIFANQSGLDMLETTLVSLQDITLDKMFDDSGRKALVP 791

Query: 759 EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVL-NEEETAHCICFMFINWSFV 814
           EF +IMQQG+A L GGIC+S+MGR V+YE+AVAWKVL  +E T HC+ F F+NWSF+
Sbjct: 792 EFAKIMQQGYAHLPGGICMSTMGRHVTYEQAVAWKVLAADESTVHCLAFSFVNWSFL 848


>gi|414864313|tpg|DAA42870.1| TPA: putative homeobox/lipid-binding domain family protein isoform
           1 [Zea mays]
 gi|414864314|tpg|DAA42871.1| TPA: putative homeobox/lipid-binding domain family protein isoform
           2 [Zea mays]
          Length = 840

 Score = 1083 bits (2800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/832 (63%), Positives = 641/832 (77%), Gaps = 36/832 (4%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           K   +D+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPKQIKVWFQN
Sbjct: 19  KVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQN 78

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLAT 128
           RRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + RQ  Q+T+LA 
Sbjct: 79  RRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTSLAN 138

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            DTSCES VT+      P +  RDAS P+GLL+IAEET TEFLSKATGTA++WVQMPGMK
Sbjct: 139 -DTSCESNVTA------PPNAIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 191

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDSVGIVAISHGC GVAARACGLV LEPT+V EILKDRP                   
Sbjct: 192 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSWFRDCRSLEVFTMFPAGN 251

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I      +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP     Q FV
Sbjct: 252 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQFV 311

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T  ALR L
Sbjct: 312 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 371

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV V  
Sbjct: 372 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVVAC 431

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NS+       N     G P     ++CAKASMLLQ+VPPA+L+RFLREHRSEWAD NID 
Sbjct: 432 NSTKKIRNNSNAGITFGAPG---GIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDA 488

Query: 464 YSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           Y A+++K   CSLPG R   F G Q+I+PLAHT+E+EE +EV++LEG   + ++A++ RD
Sbjct: 489 YLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRD 548

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           + LLQLC+G+DE +VG+  +L+FAPID  F DDAPL+ SGFR+IPLD   +  S  RTLD
Sbjct: 549 IHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDMKTDGVSSGRTLD 608

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           LAS+L++G A  +A+ +   +   +RSV+TIAF+F +E H+Q+ VATMARQYVRS++S+V
Sbjct: 609 LASSLDVGSAAPQASGDAPPDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSVVSAV 668

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKN 702
           QRV++A+SPS     AG R   G PEA TLARW+C SY  +LGV+LL  S E  E++LK 
Sbjct: 669 QRVSMAISPSQSGLNAGQRMLSGFPEAATLARWVCQSYHYHLGVELLNQSDEAGEALLKM 728

Query: 703 LWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQ 762
           LWHH DAV+CCS K  P+FTFAN+AGLDMLET+L+ALQD+TL+KIFD+ GRKA+F++  +
Sbjct: 729 LWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLIALQDLTLDKIFDESGRKAIFSDISK 788

Query: 763 IMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +M+QG+A L  G+C+S MGR VS+++AVAWKVL E+ + HC+ F F+NWSFV
Sbjct: 789 LMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSSVHCLAFCFVNWSFV 840


>gi|162459714|ref|NP_001105994.1| rolled leaf 2 [Zea mays]
 gi|82754245|gb|ABB89930.1| rolled leaf 2 [Zea mays]
          Length = 840

 Score = 1082 bits (2797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/832 (63%), Positives = 641/832 (77%), Gaps = 36/832 (4%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           K   +D+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPKQIKVWFQN
Sbjct: 19  KVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQN 78

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLAT 128
           RRCR+KQRKE+SRLQAVNR+LTAMNKLLMEEN+RLQKQVSQLV+EN + RQ  Q+T+LA 
Sbjct: 79  RRCRDKQRKESSRLQAVNRRLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTSLA- 137

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            DTSCES VT+      P +  RDAS P+GLL+IAEET TEFLSKATGTA++WVQMPGMK
Sbjct: 138 NDTSCESNVTA------PPNAIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 191

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDSVGIVAISHGC GVAARACGLV LEPT+V EILKDRP                   
Sbjct: 192 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSWFRDCRSLEVFTMFPAGN 251

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I      +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP     Q FV
Sbjct: 252 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQFV 311

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T  ALR L
Sbjct: 312 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 371

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV V  
Sbjct: 372 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVVAC 431

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NS+       N     G P     ++CAKASMLLQ+VPPA+L+RFLREHRSEWAD NID 
Sbjct: 432 NSTKKIRNNSNAGITFGAPG---GIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDA 488

Query: 464 YSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           Y A+++K   CSLPG R   F G Q+I+PLAHT+E+EE +EV++LEG   + ++A++ RD
Sbjct: 489 YLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRD 548

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           + LLQLC+G+DE +VG+  +L+FAPID  F DDAPL+ SGFR+IPLD   +  S  RTLD
Sbjct: 549 IHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDMKTDGVSSGRTLD 608

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           LAS+L++G A  +A+ +   +   +RSV+TIAF+F +E H+Q+ VATMARQYVRS++S+V
Sbjct: 609 LASSLDVGSAAPQASGDAPPDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSVVSAV 668

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKN 702
           QRV++A+SPS     AG R   G PEA TLARW+C SY  +LGV+LL  S E  E++LK 
Sbjct: 669 QRVSMAISPSQSGLNAGQRMLSGFPEAATLARWVCQSYHYHLGVELLNQSDEAGEALLKM 728

Query: 703 LWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQ 762
           LWHH DAV+CCS K  P+FTFAN+AGLDMLET+L+ALQD+TL+KIFD+ GRKA+F++  +
Sbjct: 729 LWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLIALQDLTLDKIFDESGRKAIFSDISK 788

Query: 763 IMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +M+QG+A L  G+C+S MGR VS+++AVAWKVL E+ + HC+ F F+NWSFV
Sbjct: 789 LMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSSVHCLAFCFVNWSFV 840


>gi|63115354|gb|AAY33856.1| class III HD-zip protein [Gossypium barbadense]
          Length = 836

 Score = 1080 bits (2794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/845 (63%), Positives = 642/845 (75%), Gaps = 42/845 (4%)

Query: 1   MAMSCKDGKTGS----LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSN 56
           MAM+    +  S    LD GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPILSN
Sbjct: 3   MAMTHHHNRESSIDKHLDTGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILSN 62

Query: 57  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGY 116
           IEPKQ K  FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENGY
Sbjct: 63  IEPKQFKALFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGY 122

Query: 117 FRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATG 175
            RQ   +   +  D SC+S VT      TPQH  R+A+ PAGLLSIAEETL EFLSKATG
Sbjct: 123 MRQQLHTVNASATDASCDSAVT------TPQHSLRNANNPAGLLSIAEETLAEFLSKATG 176

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------- 228
           TAV WVQMPGMKPGPDSVGI A S  CSG+AARACGLV LEPT++AEILKDRP       
Sbjct: 177 TAVNWVQMPGMKPGPDSVGIFATSQSCSGMAARACGLVSLEPTKIAEILKDRPSWFRDCR 236

Query: 229 -----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  I      ++A TTLAPARDFW LRYT+ LE+GSLVVCERSL    
Sbjct: 237 KLEVFTMFPAGNGGTIELVYTQMFAPTTLAPARDFWTLRYTTTLENGSLVVCERSLSGSG 296

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GP++     FVRAE+LPSGYLIRPCEGGGSIIHIVDH++LE WSVPEVLRPLYESS V+
Sbjct: 297 AGPSVASAAQFVRAEVLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRVI 356

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQK T+ ALR +RQ+AQE +   V   GR+PA LR  SQRLSRGFNEA+NGF ++GW++M
Sbjct: 357 AQKMTIPALRYVRQIAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNEAINGFNEDGWSIM 416

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
             DG +DV + +NS        NL+    F      VLCAKASMLLQNVPPA+L+RFLRE
Sbjct: 417 NCDGTEDVIIAINSGKSLSNSSNLTTGLSFLG---GVLCAKASMLLQNVPPAVLVRFLRE 473

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGV 510
           HR EWAD N+D YSAA++K G  + PG R  +F GSQ+I+PL  T+EHEE +EVI+LEG 
Sbjct: 474 HRLEWADFNVDAYSAASLKAGTYTYPGMRPTSFTGSQIIMPLGQTVEHEELLEVIRLEGQ 533

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
             + EDA++ RD+ LLQ+CSG+D+NAVG C+EL+FAPID  F DDA LLPSGFRIIPL+S
Sbjct: 534 SLTQEDALLSRDIHLLQICSGIDDNAVGACSELVFAPIDEMFPDDAALLPSGFRIIPLES 593

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
             ++ + NRTLDL S+LE+GPA ++A  +  + +   RSV+TIAF+F F+++++++VATM
Sbjct: 594 KPDSLATNRTLDLTSSLEVGPATSQAAGDSPSQNA--RSVLTIAFQFPFDTNLRDNVATM 651

Query: 631 ARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLK 690
           ARQYVRS+ISSVQR A+A+SP   S   G +   G+PEALTLA WIC SY  +LG +LLK
Sbjct: 652 ARQYVRSVISSVQRXAMAISPCGSSPTIGPKPSPGSPEALTLAHWICQSYSFHLGEELLK 711

Query: 691 SSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDD 750
           S S G +S+LKNLW H DA++CCSLK++PVF FANQAGLDMLETTLV L DITL+KIFD+
Sbjct: 712 SESLGGDSVLKNLWQHQDAILCCSLKSVPVFIFANQAGLDMLETTLVDLPDITLDKIFDE 771

Query: 751 HGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVL-NEEETAHCICFMFI 809
            GRKAL ++F ++MQQGF  L  G+C+S+MGR VSYE+AVAWKVL  +  T HC+ F FI
Sbjct: 772 SGRKALCSDFTKLMQQGFTHLLAGVCMSTMGRHVSYEQAVAWKVLAADANTVHCLAFSFI 831

Query: 810 NWSFV 814
           NWSFV
Sbjct: 832 NWSFV 836


>gi|109729905|tpg|DAA05766.1| TPA_inf: class III HD-Zip protein REV1 [Lotus japonicus]
          Length = 841

 Score = 1080 bits (2793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/856 (63%), Positives = 651/856 (76%), Gaps = 57/856 (6%)

Query: 1   MAMSCKDGKTGSLD-----NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILS 55
           MAM+    +  S+D     +GKYVRYT  QVEALER+Y ECPKPSS+RRQQLIRECP+L+
Sbjct: 1   MAMAFVQDRESSIDRHLDSSGKYVRYTAGQVEALERVYTECPKPSSLRRQQLIRECPVLA 60

Query: 56  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENG 115
           N+EPKQIKVWFQNRRCREKQRKEASRLQAVNRKL AMNKLLMEENDRLQKQVSQLV ENG
Sbjct: 61  NVEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLNAMNKLLMEENDRLQKQVSQLVCENG 120

Query: 116 YFRQHTQSTTLA-TKDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLTEFLSKA 173
           + RQ  Q+ + A T D + +SV T+ ++ +      RDA SPAG LSIAEETL EFLSKA
Sbjct: 121 FMRQQLQAPSAAGTTDGNGDSVATTSRNSM------RDANSPAGFLSIAEETLAEFLSKA 174

Query: 174 TGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR------ 227
           TGTAV+WVQ+PGMKPGPDSVGI  IS  CSGVAARACGLV LEP +VAEILKDR      
Sbjct: 175 TGTAVDWVQLPGMKPGPDSVGIFTISQSCSGVAARACGLVSLEPNKVAEILKDRLSWFRD 234

Query: 228 ----------PRGSA--------ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKN 269
                     P G+           YA  TL+PARDFW LRYT+ LE+GSLVVCERSL  
Sbjct: 235 CRSLEVFTMFPAGNGGTIELVYTQTYAPMTLSPARDFWTLRYTTTLENGSLVVCERSLSG 294

Query: 270 IQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 329
              GP       FVRAEMLPSGYLIRPCEGGGSIIHIVDH++L+ WSVPEVLRPLYESS 
Sbjct: 295 SGAGPNAAAAHQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPLYESSK 354

Query: 330 VLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT 389
           V+AQ+ T+AALR +RQ+AQE +   V G GR+PA LR  SQRLSRGFN+AVNGF D+GW+
Sbjct: 355 VVAQRMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWS 414

Query: 390 VMGNDGMDDVTVLVNSSPDKLMGLN-----LSFANGFPAVSNAVLCAKASMLLQNVPPAI 444
           V+  DG +DV + VNS+ + L G +     L+FA G       VLCAKASMLLQN+PPA+
Sbjct: 415 VLNCDGAEDVIISVNSTKN-LSGTSNPASSLTFAGG-------VLCAKASMLLQNIPPAV 466

Query: 445 LLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFME 503
           L+RFLREHRSEWAD N+D YSAA++K G  + PG R   F G+Q+I+PL HTIEHEE +E
Sbjct: 467 LVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPMRFTGNQIIMPLGHTIEHEEMLE 526

Query: 504 VIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGF 563
           VI+LEG   + EDA   RD+ LLQLCSG+DE+AVG C ELIFAPID  F DDAPL+PSGF
Sbjct: 527 VIRLEGHSLAQEDAFASRDVHLLQLCSGIDEDAVGACCELIFAPIDEMFPDDAPLVPSGF 586

Query: 564 RIIPLDSG----KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAF 619
           RIIPLDS     K+T + N+TL+L S LE+G + N    + S+     RSV+TIAF+F F
Sbjct: 587 RIIPLDSKPGDKKDTMTTNKTLNLTSGLEVGASTNHTAGDASSCHN-NRSVLTIAFQFPF 645

Query: 620 ESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHS 679
           ES +Q++VA MARQYVRS+ISSVQ V++A+SPS  +  AG +  +G+PEALTLARW+C S
Sbjct: 646 ESSLQDNVAVMARQYVRSVISSVQTVSMAISPSGTNPAAGAKLSVGSPEALTLARWVCQS 705

Query: 680 YRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVAL 739
           Y  YLG  LL+S S   + +LK+LWHH DA++CCSLK++P+F FANQAGLDMLETTLVAL
Sbjct: 706 YSYYLGTGLLRSDSLVGDLVLKHLWHHQDAILCCSLKSVPMFIFANQAGLDMLETTLVAL 765

Query: 740 QDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE 799
           QDITL+KIFD+ GRKALFA+F ++MQQGFA L  GIC+S+MGR VSYE+ +AWKVL EE+
Sbjct: 766 QDITLDKIFDESGRKALFADFAKLMQQGFAYLPAGICMSTMGRHVSYEQVIAWKVLAEED 825

Query: 800 -TAHCICFMFINWSFV 814
            + HC+ F FINWSFV
Sbjct: 826 NSVHCLAFSFINWSFV 841


>gi|297826941|ref|XP_002881353.1| hypothetical protein ARALYDRAFT_902559 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327192|gb|EFH57612.1| hypothetical protein ARALYDRAFT_902559 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 859

 Score = 1079 bits (2790), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/838 (65%), Positives = 643/838 (76%), Gaps = 42/838 (5%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           LD+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 28  LDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 87

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEA+RLQ VNRKL AMNKLLMEENDRLQKQVS LVYENG+ +Q   +++  T D S
Sbjct: 88  EKQRKEAARLQTVNRKLNAMNKLLMEENDRLQKQVSHLVYENGHMKQQLHTSSGTTTDNS 147

Query: 133 CESVVTSGQHHLTPQHPP----RDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
           CESVV SGQ H      P    RDA+ PAGLLSIAEE L EFLSKATGTAV+WVQM GMK
Sbjct: 148 CESVVVSGQQHQQQNPNPQHLQRDANNPAGLLSIAEEALAEFLSKATGTAVDWVQMIGMK 207

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDS+GIVAIS  CSG+AARACGLV LEP +VAEILKDRP                   
Sbjct: 208 PGPDSIGIVAISRNCSGIAARACGLVSLEPMKVAEILKDRPSWLRDCRCVDTLSVIPAGN 267

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I      +YA TTLA ARDFW LRY++ LEDGS VVCERS+ +   GPT PP   FV
Sbjct: 268 GGTIELIYTQMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSITSATGGPTGPPSSSFV 327

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEM PSG+LIRPCEGGGSI+HIVDH+DL+ WSVPEV+RPLYESS +LAQK T+AALR +
Sbjct: 328 RAEMRPSGFLIRPCEGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAALRHV 387

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE +     G GR+PA LR  SQRL RGFN+AVNGF D+GW+ MG+DG +D+TV++
Sbjct: 388 RQIAQETSGEVQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMGSDGAEDITVMI 447

Query: 404 NSSPDKLMGLNLSFANGF-PAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNID 462
           N SP KL G    + N F P+  + VLCAKASMLLQNVPPA+L+RFLREHRSEWAD  +D
Sbjct: 448 NLSPGKLCGSQ--YGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLREHRSEWADYGVD 505

Query: 463 VYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPR 521
            Y+AA+++  P ++P +R G F S QVILPLA T+EHEE +EV++LEG  +SPED  + R
Sbjct: 506 AYAAASLRASPFAVPCARAGGFPSNQVILPLAQTVEHEESLEVVRLEGHAYSPEDMGLAR 565

Query: 522 DMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD--SGKETSSPNR 579
           DM+LLQLCSG+DEN VG CA+L+FAPID SFADDAPLLPSGFRIIPL+  S    +S NR
Sbjct: 566 DMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRIIPLEQKSTPNGASTNR 625

Query: 580 TLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSII 639
           TLDLASALE      R       N    RSV+TIAF+F F++H ++ VA+MARQYVRSI+
Sbjct: 626 TLDLASALE---GSTRQAGEADPNGCNFRSVLTIAFQFTFDNHSRDSVASMARQYVRSIV 682

Query: 640 SSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS-ES 698
            S+QRVALA++P   S+ + +  P  +PEALTL RWI  SY  + G DL  S S+ S ++
Sbjct: 683 GSIQRVALAIAPRPGSNISPISVPT-SPEALTLVRWIARSYSLHTGADLFGSDSQTSGDT 741

Query: 699 ILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKAL 756
           +L  LW+HTDA++CCSLK  A PVFTFANQ GLDMLETTLVALQDI L+K  D+ GRKAL
Sbjct: 742 LLHQLWNHTDAILCCSLKTNASPVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKAL 801

Query: 757 FAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            +EFP+IMQQG+A L  G+C SSMGR VSYE+A  WKVL ++E+ HC+ FMF+NWSFV
Sbjct: 802 CSEFPKIMQQGYAHLPAGVCASSMGRMVSYEQATVWKVLEDDESNHCLAFMFVNWSFV 859


>gi|162462024|ref|NP_001105533.1| rolled leaf1 [Zea mays]
 gi|40950648|gb|AAR97952.1| rolled leaf1 [Zea mays]
          Length = 840

 Score = 1078 bits (2788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/832 (63%), Positives = 638/832 (76%), Gaps = 36/832 (4%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           K   +D+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPKQIKVWFQN
Sbjct: 19  KVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQN 78

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLAT 128
           RRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + RQ  Q+T+LA 
Sbjct: 79  RRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTSLAN 138

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            DTSCES VT      TP +P RDAS P+GLL+IAEET TEFLSKATGTA++WVQMPGMK
Sbjct: 139 -DTSCESNVT------TPPNPIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 191

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDSVGIVAISHGC GVAARACGLV LEPT+  EILKDRP                   
Sbjct: 192 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDCRSLEVFTRFPAGN 251

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I      +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP     Q FV
Sbjct: 252 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASTQQFV 311

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T  ALR L
Sbjct: 312 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 371

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV +  
Sbjct: 372 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVIAC 431

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NS+       N     G P     ++CAKASMLLQ+VPPA+L+RFLREHRSEWAD NID 
Sbjct: 432 NSTKKIRNTSNAGITFGAPG---GIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDA 488

Query: 464 YSAAAIKVGPCSLPGSRVGTFG-SQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           Y A+++K   CSLPG R   F   Q+I+PLAHT+E+EE +EV++LEG   + ++A++ RD
Sbjct: 489 YLASSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRD 548

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           + LLQLC+G+DE +VG+  +L+FAPID  F DDAPL+ SGFR+IPLD   +  S  RTLD
Sbjct: 549 IHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDVKTDGVSSGRTLD 608

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           LAS+L++G A  +A+ + S +   +RSV+TIAF+F +E H+Q+ VA MARQYVRS+IS+V
Sbjct: 609 LASSLDVGSAAPQASGDASPDDCSLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAV 668

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKN 702
           QRV++A+SPS     AG R   G PEA TLARW+C SY  +LG++LL  S    E++LK 
Sbjct: 669 QRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKM 728

Query: 703 LWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQ 762
           LWHH DAV+CCS K  P+FTFAN+AGLDMLET+LVALQD+TL+KIFD+ GRKALF++  +
Sbjct: 729 LWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISK 788

Query: 763 IMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +M+QG+A L  G+C+S MGR VS+++AVAWKVL E+   HC+ F F+NWSFV
Sbjct: 789 LMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV 840


>gi|63095203|gb|AAY32332.1| HB1 [Phyllostachys praecox]
          Length = 824

 Score = 1077 bits (2786), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/829 (64%), Positives = 644/829 (77%), Gaps = 39/829 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D+GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+RECPIL+NIEPKQIKVWFQNRRCR
Sbjct: 8   IDSGKYVRYTPEQVEALERMYAECPKPSSTRRQQLLRECPILANIEPKQIKVWFQNRRCR 67

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           +KQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV+EN Y +Q  Q+ +LA  DTS
Sbjct: 68  DKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENAYMKQQLQNPSLAN-DTS 126

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CES VT+       Q+P +DAS P+GLLSIAEETLTEFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 127 CESNVTT-------QNPLKDASNPSGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPD 179

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           SVGIVAISHGC GVAARAC LV LEPT+V EILKDRP                   G  I
Sbjct: 180 SVGIVAISHGCRGVAARACDLVNLEPTKVVEILKDRPSWFCDRQSLEVFTMFPAGNGGTI 239

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 LYA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP+    Q FVRAEM
Sbjct: 240 ELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQFVRAEM 299

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T AALR +RQ+A
Sbjct: 300 LPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIA 359

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV +  NS  
Sbjct: 360 QETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNS-- 417

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
            K +  N + AN F A    V+CAKASMLLQ+VPPA+L+RFLREHRSEWAD N D YSA 
Sbjct: 418 -KKIRNNSTAANAFGA-PGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSAL 475

Query: 468 AIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
           A+K   CSLPG R   F GSQ+I+PLAHT+E+EE +EVI+LEG   + ++ ++ RD+ LL
Sbjct: 476 ALKTSSCSLPGLRPTRFSGSQIIMPLAHTVENEEILEVIRLEGQALTHDEGLLSRDIHLL 535

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASA 586
           QLC+G+DE ++G+C +L+FAPID  F DDAPL+ SGFR+IPLD   + +   RTLDLAS+
Sbjct: 536 QLCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGAPTGRTLDLASS 595

Query: 587 LEIGPAGNRATNNYSTNST-CMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRV 645
           LE+G    +AT + S +    +RSV+TIAF+F +E H+Q+ VATMARQYVRS++S+VQRV
Sbjct: 596 LEVGSTTQQATGDASLDDCRNLRSVLTIAFQFPYEIHLQDSVATMARQYVRSVVSAVQRV 655

Query: 646 ALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWH 705
           ++A+SP      AG +   G PEA TLARWIC SY+ +LGV+LL+ + E  ES+L+ LW 
Sbjct: 656 SMAISPPRSGVNAGQKIFSGFPEAATLARWICQSYQFHLGVELLRQADEAGESLLRMLWD 715

Query: 706 HTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQ 765
           + DA++CCS K  PVFTFAN+ GL+MLET+LVALQD++L+KIFD+ GRKAL +E P++M+
Sbjct: 716 YEDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDETGRKALHSEIPKLME 775

Query: 766 QGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           QG+  L  G+CLS MGR VS+E+AVAWKVL E+   HC+ F F+NWSFV
Sbjct: 776 QGYVYLPAGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 824


>gi|15226808|ref|NP_181018.1| homeobox-leucine zipper protein ATHB-14 [Arabidopsis thaliana]
 gi|75096986|sp|O04291.1|ATB14_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-14; AltName:
           Full=HD-ZIP protein ATHB-14; AltName: Full=Homeodomain
           transcription factor ATHB-14; AltName: Full=Protein
           PHABULOSA
 gi|2145356|emb|CAA72007.1| HD-Zip protein [Arabidopsis thaliana]
 gi|3132474|gb|AAC16263.1| homeodomain transcription factor (ATHB-14) [Arabidopsis thaliana]
 gi|20152534|emb|CAD29659.1| homeodomain-leucine zipper protein 14 [Arabidopsis thaliana]
 gi|20466650|gb|AAM20642.1| homeodomain transcription factor [Arabidopsis thaliana]
 gi|23198254|gb|AAN15654.1| homeodomain transcription factor [Arabidopsis thaliana]
 gi|330253918|gb|AEC09012.1| homeobox-leucine zipper protein ATHB-14 [Arabidopsis thaliana]
          Length = 852

 Score = 1076 bits (2783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/848 (64%), Positives = 644/848 (75%), Gaps = 42/848 (4%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M  ++     LD+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQI
Sbjct: 11  MMNRESPDKGLDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQI 70

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKEA+RLQ VNRKL AMNKLLMEENDRLQKQVS LVYENG+ +    
Sbjct: 71  KVWFQNRRCREKQRKEAARLQTVNRKLNAMNKLLMEENDRLQKQVSNLVYENGHMKHQLH 130

Query: 123 STTLATKDTSCESVVTSGQHHLTPQHPP----RDAS-PAGLLSIAEETLTEFLSKATGTA 177
           + +  T D SCESVV SGQ H      P    RDA+ PAGLLSIAEE L EFLSKATGTA
Sbjct: 131 TASGTTTDNSCESVVVSGQQHQQQNPNPQHQQRDANNPAGLLSIAEEALAEFLSKATGTA 190

Query: 178 VEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP--------- 228
           V+WVQM GMKPGPDS+GIVAIS  CSG+AARACGLV LEP +VAEILKDRP         
Sbjct: 191 VDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLVSLEPMKVAEILKDRPSWLRDCRSV 250

Query: 229 ---------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNG 273
                     G  I      +YA TTLA ARDFW LRY++ LEDGS VVCERSL +   G
Sbjct: 251 DTLSVIPAGNGGTIELIYTQMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSLTSATGG 310

Query: 274 PTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQ 333
           PT PP  +FVRAEM PSG+LIRPC+GGGSI+HIVDH+DL+ WSVPEV+RPLYESS +LAQ
Sbjct: 311 PTGPPSSNFVRAEMKPSGFLIRPCDGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQ 370

Query: 334 KTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGN 393
           K T+AALR +RQ+AQE +     G GR+PA LR  SQRL RGFN+AVNGF D+GW+ MG+
Sbjct: 371 KMTVAALRHVRQIAQETSGEVQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMGS 430

Query: 394 DGMDDVTVLVNSSPDKLMGLNLSFANGF-PAVSNAVLCAKASMLLQNVPPAILLRFLREH 452
           DG +DVTV++N SP K  G    + N F P+  + VLCAKASMLLQNVPPA+L+RFLREH
Sbjct: 431 DGAEDVTVMINLSPGKFGGSQ--YGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLREH 488

Query: 453 RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGVG 511
           RSEWAD  +D Y+AA+++  P ++P +R G F S QVILPLA T+EHEE +EV++LEG  
Sbjct: 489 RSEWADYGVDAYAAASLRASPFAVPCARAGGFPSNQVILPLAQTVEHEESLEVVRLEGHA 548

Query: 512 HSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD-- 569
           +SPED  + RDM+LLQLCSG+DEN VG CA+L+FAPID SFADDAPLLPSGFRIIPL+  
Sbjct: 549 YSPEDMGLARDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRIIPLEQK 608

Query: 570 SGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVAT 629
           S    +S NRTLDLASALE      R       N    RSV+TIAF+F F++H ++ VA+
Sbjct: 609 STPNGASANRTLDLASALE---GSTRQAGEADPNGCNFRSVLTIAFQFTFDNHSRDSVAS 665

Query: 630 MARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLL 689
           MARQYVRSI+ S+QRVALA++P   S+ + +  P  +PEALTL RWI  SY  + G DL 
Sbjct: 666 MARQYVRSIVGSIQRVALAIAPRPGSNISPISVPT-SPEALTLVRWISRSYSLHTGADLF 724

Query: 690 KSSSEGS-ESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEK 746
            S S+ S +++L  LW+H+DA++CCSLK  A PVFTFANQ GLDMLETTLVALQDI L+K
Sbjct: 725 GSDSQTSGDTLLHQLWNHSDAILCCSLKTNASPVFTFANQTGLDMLETTLVALQDIMLDK 784

Query: 747 IFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICF 806
             D+ GRKAL +EFP+IMQQG+A L  G+C SSMGR VSYE+A  WKVL ++E+ HC+ F
Sbjct: 785 TLDEPGRKALCSEFPKIMQQGYAHLPAGVCASSMGRMVSYEQATVWKVLEDDESNHCLAF 844

Query: 807 MFINWSFV 814
           MF+NWSFV
Sbjct: 845 MFVNWSFV 852


>gi|187471155|sp|A2XBL9.2|HOX10_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX10; AltName:
           Full=HD-ZIP protein HOX10; AltName: Full=Homeodomain
           transcription factor HOX10; AltName: Full=OsHB1;
           AltName: Full=OsHox10
          Length = 839

 Score = 1075 bits (2781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 530/844 (62%), Positives = 647/844 (76%), Gaps = 41/844 (4%)

Query: 1   MAMSCKDG----KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSN 56
           M  S  DG    K   +D+GKYVRYTPEQVEALER+Y +CPKP+S RRQQL+RECPIL+N
Sbjct: 7   MRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILAN 66

Query: 57  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGY 116
           IEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN +
Sbjct: 67  IEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAH 126

Query: 117 FRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATG 175
            RQ  Q+T LA  DTSCES VT      TPQ+P RDAS P+GLLSIAEETLTEFLSKATG
Sbjct: 127 MRQQLQNTPLA-NDTSCESNVT------TPQNPLRDASNPSGLLSIAEETLTEFLSKATG 179

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------- 228
           TA++WVQMPGMKPGPDSVGIVAISHGC GVAARACGLV LEPT+V EILKDRP       
Sbjct: 180 TAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCR 239

Query: 229 -----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  +      LYA TTL PARDFW LRYT+ +EDGSLVVCERSL    
Sbjct: 240 NLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSG 299

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GP+    Q +VRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+
Sbjct: 300 GGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVV 359

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQK T AALR +RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW++M
Sbjct: 360 AQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIM 419

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           G DG++DV +  NS+       N   A G P     ++CAKASMLLQ+VPPA+L+RFLRE
Sbjct: 420 GGDGVEDVVIACNSTKKIRSNSNAGIAFGAPG---GIICAKASMLLQSVPPAVLVRFLRE 476

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGV 510
           HRSEWAD NID Y A+ +K   CSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG 
Sbjct: 477 HRSEWADYNIDAYLASTLKTSACSLPGLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQ 536

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
             + ++A++ RD+ LLQLC+G+DE +VG+  +L+FAPID  F D+ PL+ SGFR+IPLD 
Sbjct: 537 PLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID-DFPDETPLISSGFRVIPLDM 595

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
             + +S  RTLDLAS+LE+G A  +A+ + S +   +RSV+TIAF+F +E H+Q+ VA M
Sbjct: 596 KTDGASSGRTLDLASSLEVGSATAQASGDASADDCNLRSVLTIAFQFPYELHLQDSVAAM 655

Query: 631 ARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLK 690
           ARQYVRSI+S+VQRV++A+SPS     AG R   G PEA TLARW+C SY  +LGV+LL 
Sbjct: 656 ARQYVRSIVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLS 715

Query: 691 SSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDD 750
            S   +E +LK LWH+ DA++CCS K  PVFTFAN+AGLDMLET+LVALQD+TL++IFD+
Sbjct: 716 QSDGDAEQLLKMLWHYQDAILCCSFKEKPVFTFANKAGLDMLETSLVALQDLTLDRIFDE 775

Query: 751 HGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFIN 810
            G++ALF+  P++M+QG   L  G+C+S MGR VS+++AVAWKVL E+   HC+ F F+N
Sbjct: 776 PGKEALFSNIPKLMEQGHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVN 835

Query: 811 WSFV 814
           WSFV
Sbjct: 836 WSFV 839


>gi|206572103|gb|ACI13684.1| putative REV HD-ZipIII [Malus x domestica]
          Length = 845

 Score = 1074 bits (2778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/835 (64%), Positives = 636/835 (76%), Gaps = 43/835 (5%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           LD GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIREC ILSNIEP+QIKVWFQNRRCR
Sbjct: 21  LDAGKYVRYTSEQVEALERVYAECPKPSSLRRQQLIRECSILSNIEPRQIKVWFQNRRCR 80

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV ENGY RQ   S + AT D S
Sbjct: 81  EKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGYMRQQLHSASAATTDAS 140

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
            +SVVT      TPQH  RDA+ PAGLLS+AEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 141 GDSVVT------TPQHSLRDANNPAGLLSVAEETLAEFLSKATGTAVDWVQMPGMKPGPD 194

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           SVGI AIS  CSGVAARACGLV LEPT++AEILKDRP                   G  I
Sbjct: 195 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTI 254

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                  YA TTLAPARDFW LRYT+ L++GS VVCERSL     GP       FVR  M
Sbjct: 255 ELIYTQTYAPTTLAPARDFWTLRYTATLDNGSFVVCERSLSGSGAGPNPASASQFVRGAM 314

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPCEGGGSI+HIVDH++LE WSVPEVLRPLYESS V+AQ+ T+AALR +RQ+A
Sbjct: 315 LPSGYLIRPCEGGGSIVHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAALRYIRQIA 374

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMG--NDGMDDVTVLVNS 405
           +E +   V   GR+PA LR  SQRL RGFN+AVNGF D+GW+++    DG DDV + VNS
Sbjct: 375 EETSGEVVYSLGRQPAVLRTFSQRLIRGFNDAVNGFNDDGWSLVNCDGDGADDVIIAVNS 434

Query: 406 SPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYS 465
           +  K +    + AN   A+   VLCAKASMLLQNVPPA+L+RFLREHRSEWAD N+D YS
Sbjct: 435 T--KNLTSTSNHANSL-ALLGGVLCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYS 491

Query: 466 AAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMF 524
           A ++K G  + PG R   F G Q+I+PL HTIE EE +EV++LEG   + EDA   RD+ 
Sbjct: 492 ATSMKAGAYAYPGMRPTRFTGGQIIMPLGHTIEQEELLEVVRLEGHSLTQEDAFASRDIH 551

Query: 525 LLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS----GKETSSPNRT 580
           LLQ+CSG+DENAVG C+EL+FAPID  F DDAPLLPSGFRIIPLDS     K+T + +RT
Sbjct: 552 LLQICSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSKTGDSKDTLNTHRT 611

Query: 581 LDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIIS 640
           LDL S+LE+G   + A    +T     RSV+TIAF+F F++ +QE+VA MARQYVRS+IS
Sbjct: 612 LDLTSSLEVGSTTSNAAGELTTFHN-TRSVLTIAFQFPFDNSLQENVANMARQYVRSVIS 670

Query: 641 SVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESIL 700
           SVQRVA+A+SPS +S   G +   G+PEA TLA WIC SY  ++G +LL+  S G +S+L
Sbjct: 671 SVQRVAMAISPSGLSPSVGPKLSPGSPEAQTLAHWICQSYSYHVGGELLRPDSLGGDSLL 730

Query: 701 KNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEF 760
           K+LWHH DA++CCSLK++PVF FANQAGLDMLETTLVALQDI+L+KIFD+ GRK L A+F
Sbjct: 731 KHLWHHQDAILCCSLKSMPVFIFANQAGLDMLETTLVALQDISLDKIFDESGRKTLCADF 790

Query: 761 PQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVL-NEEETAHCICFMFINWSFV 814
            ++M QGFA L  GIC+S+MGR VSYE+A+AWKV+  EE + HC+ F F+NWSFV
Sbjct: 791 AKLMNQGFAYLPAGICMSTMGRHVSYEQAIAWKVVAAEENSVHCLAFSFVNWSFV 845


>gi|223975951|gb|ACN32163.1| unknown [Zea mays]
 gi|413957207|gb|AFW89856.1| rolled leaf1 isoform 1 [Zea mays]
 gi|413957208|gb|AFW89857.1| rolled leaf1 isoform 2 [Zea mays]
          Length = 842

 Score = 1073 bits (2776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/832 (63%), Positives = 637/832 (76%), Gaps = 37/832 (4%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           K   +D+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPKQIKVWFQN
Sbjct: 22  KVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQN 81

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLAT 128
           RRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + RQ  Q+T+LA 
Sbjct: 82  RRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTSLA- 140

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            DTSCES VT      TP +P RDAS P+GLL+IAEET TEFLSKATGTA++WVQMPGMK
Sbjct: 141 NDTSCESNVT------TPPNPIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 194

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDSVGIVAISHGC GVAARACGLV LEPT+  EILKDRP                   
Sbjct: 195 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDCRSLEVFTRFPAGN 254

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I      +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP     Q FV
Sbjct: 255 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASTQQFV 314

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T  ALR L
Sbjct: 315 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 374

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV +  
Sbjct: 375 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVIAC 434

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NS+       N     G P     ++CAKASMLLQ+VPPA+L+RFLREHRSEWAD NID 
Sbjct: 435 NSTKKIRNTSNAGITFGAPG---GIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDA 491

Query: 464 YSAAAIKVGPCSLPGSRVGTFG-SQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           Y A+++K   CSLPG R   F   Q+I+PLAHT+E+EE +EV++LEG   + ++A++ RD
Sbjct: 492 YLASSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRD 551

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           + LLQLC+G+DE +VG+  +L+FAPID  F DDAPL+ SGFR+IPLD   +  S  RTLD
Sbjct: 552 IHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDVKTDGVSSGRTLD 611

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           LAS+L++G A  +A+   S +   +RSV+TIAF+F +E H+Q+ VA MARQYVRS+IS+V
Sbjct: 612 LASSLDVGSAAPQASGE-SPDDCSLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAV 670

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKN 702
           QRV++A+SPS     AG R   G PEA TLARW+C SY  +LG++LL  S    E++LK 
Sbjct: 671 QRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKM 730

Query: 703 LWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQ 762
           LWHH DAV+CCS K  P+FTFAN+AGLDMLET+LVALQD+TL+KIFD+ GRKALF++  +
Sbjct: 731 LWHHPDAVLCCSFKEKPMFTFANKAGLDMLETSLVALQDLTLDKIFDESGRKALFSDISK 790

Query: 763 IMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +M+QG+A L  G+C+S MGR VS+++AVAWKVL E+   HC+ F F+NWSFV
Sbjct: 791 LMEQGYAYLPSGVCMSGMGRHVSFDQAVAWKVLGEDSNIHCLAFCFVNWSFV 842


>gi|115450213|ref|NP_001048707.1| Os03g0109400 [Oryza sativa Japonica Group]
 gi|75128608|sp|Q6TAQ6.1|HOX10_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX10; AltName:
           Full=HD-ZIP protein HOX10; AltName: Full=Homeodomain
           transcription factor HOX10; AltName: Full=OsHB1;
           AltName: Full=OsHox10
 gi|37813100|gb|AAR04340.1| homeodomain leucine-zipper protein Hox10 [Oryza sativa Japonica
           Group]
 gi|108705779|gb|ABF93574.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|113547178|dbj|BAF10621.1| Os03g0109400 [Oryza sativa Japonica Group]
 gi|215717163|dbj|BAG95526.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 839

 Score = 1073 bits (2774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/844 (62%), Positives = 646/844 (76%), Gaps = 41/844 (4%)

Query: 1   MAMSCKDG----KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSN 56
           M  S  DG    K   +D+GKYVRYTPEQVEALER+Y +CPKP+S RRQQL+RECPIL+N
Sbjct: 7   MRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILAN 66

Query: 57  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGY 116
           IEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN +
Sbjct: 67  IEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAH 126

Query: 117 FRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATG 175
            RQ  Q+T LA  DTSCES VT      TPQ+P RDAS P+GLLSIAEETLTEFLSKATG
Sbjct: 127 MRQQLQNTPLA-NDTSCESNVT------TPQNPLRDASNPSGLLSIAEETLTEFLSKATG 179

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------- 228
           TA++WVQMPGMKPGPDSVGIVAISHGC GVAARACGLV LEPT+V EILKDRP       
Sbjct: 180 TAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCR 239

Query: 229 -----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  +      LYA TTL PARDFW LRYT+ +EDGSLVVCERSL    
Sbjct: 240 NLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSG 299

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GP+    Q +VRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+
Sbjct: 300 GGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVV 359

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQK T AALR +RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW++M
Sbjct: 360 AQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIM 419

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           G DG++DV +  NS+       N   A G P     ++CAKASMLLQ+VPPA+L+RFLRE
Sbjct: 420 GGDGVEDVVIACNSTKKIRSNSNAGIAFGAPG---GIICAKASMLLQSVPPAVLVRFLRE 476

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGV 510
           HRSEWAD NID Y A+ +K   CSL G R   F GSQ+I+PLAHT+E+EE +EV++LEG 
Sbjct: 477 HRSEWADYNIDAYLASTLKTSACSLTGLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQ 536

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
             + ++A++ RD+ LLQLC+G+DE +VG+  +L+FAPID  F D+ PL+ SGFR+IPLD 
Sbjct: 537 PLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID-DFPDETPLISSGFRVIPLDM 595

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
             + +S  RTLDLAS+LE+G A  +A+ + S +   +RSV+TIAF+F +E H+Q+ VA M
Sbjct: 596 KTDGASSGRTLDLASSLEVGSATAQASGDASADDCNLRSVLTIAFQFPYELHLQDSVAAM 655

Query: 631 ARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLK 690
           ARQYVRSI+S+VQRV++A+SPS     AG R   G PEA TLARW+C SY  +LGV+LL 
Sbjct: 656 ARQYVRSIVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLS 715

Query: 691 SSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDD 750
            S   +E +LK LWH+ DA++CCS K  PVFTFAN+AGLDMLET+LVALQD+TL++IFD+
Sbjct: 716 QSDGDAEQLLKMLWHYQDAILCCSFKEKPVFTFANKAGLDMLETSLVALQDLTLDRIFDE 775

Query: 751 HGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFIN 810
            G++ALF+  P++M+QG   L  G+C+S MGR VS+++AVAWKVL E+   HC+ F F+N
Sbjct: 776 PGKEALFSNIPKLMEQGHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVN 835

Query: 811 WSFV 814
           WSFV
Sbjct: 836 WSFV 839


>gi|187609457|sp|A2Z8L4.2|HOX9_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX9; AltName:
           Full=HD-ZIP protein HOX9; AltName: Full=Homeodomain
           transcription factor HOX9; AltName: Full=OsHB2; AltName:
           Full=OsHox9
          Length = 840

 Score = 1072 bits (2771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/828 (63%), Positives = 644/828 (77%), Gaps = 38/828 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D+GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNRRCR
Sbjct: 25  MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCR 84

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           +KQRKEASRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN Y +Q  Q+ +L   DTS
Sbjct: 85  DKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLG-NDTS 143

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CES VT      TPQ+P RDAS P+GLL+IAEETLTEFLSKATGTAV+WV MPGMKPGPD
Sbjct: 144 CESNVT------TPQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPD 197

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           S GIVA+SHGC GVAARACGLV LEPT++ EILKDRP                   G  I
Sbjct: 198 SFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTI 257

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 +YA TTL PARDFW LRYT+ ++DGSLVVCERSL     GP+    Q FVRAEM
Sbjct: 258 ELVYMQMYAPTTLVPARDFWTLRYTTTMDDGSLVVCERSLSGSGGGPSTASAQQFVRAEM 317

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T AALR +RQ+A
Sbjct: 318 LPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIA 377

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV +  N+  
Sbjct: 378 QETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNAK- 436

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
            K+   + S AN F      V+CAKASMLLQ+VPPA+L+RFLREHRSEWAD N D YSA+
Sbjct: 437 -KVRNTSTS-ANAF-VTPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSAS 493

Query: 468 AIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
           ++K   CSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG   + +D +M RD+ LL
Sbjct: 494 SLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLL 553

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASA 586
           QLC+G+DE ++G+C +L+FAPID  F DDAPL+ SGFR+IPLD   + +   RTLDLAS+
Sbjct: 554 QLCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAGRTLDLASS 613

Query: 587 LEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVA 646
           LE+G    + T + S +   +RSV+TIAF+F +E H+Q+ VATMARQYVRSI+SSVQRV+
Sbjct: 614 LEVGSTA-QPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVS 672

Query: 647 LALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHH 706
           +A+SPS     AG +   G PEA TLARWIC SY+ +LGV+LL+ + +  E++LK LW +
Sbjct: 673 MAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDY 732

Query: 707 TDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQ 766
            DA++CCS K  PVFTFAN+ GL+MLET+LVALQD++L+KIFD+ GRKAL+ E P++M+Q
Sbjct: 733 EDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQ 792

Query: 767 GFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           G+  L GG+CLS MGR VS+E+AVAWKVL E+   HC+ F F+NWSFV
Sbjct: 793 GYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 840


>gi|242086246|ref|XP_002443548.1| hypothetical protein SORBIDRAFT_08g021350 [Sorghum bicolor]
 gi|241944241|gb|EES17386.1| hypothetical protein SORBIDRAFT_08g021350 [Sorghum bicolor]
          Length = 857

 Score = 1071 bits (2770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/834 (62%), Positives = 642/834 (76%), Gaps = 32/834 (3%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIR+CPILSNIEPKQIKVWFQNRRCR
Sbjct: 24  VDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRDCPILSNIEPKQIKVWFQNRRCR 83

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVS+LV++NGY +    S ++AT DTS
Sbjct: 84  EKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVFDNGYMKNRLHSPSVATTDTS 143

Query: 133 CESVVTSGQHHLTPQ----HPP-RDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 186
           CESVVTSG H+        HPP RDA+ PAGLL+IAEETL EF+SKATGTAV WVQM GM
Sbjct: 144 CESVVTSGHHNQQQNPAVLHPPQRDANNPAGLLAIAEETLAEFMSKATGTAVNWVQMVGM 203

Query: 187 KPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR----------------PRG 230
           KPGPDSVGI+A+SH CSGVAARACGLV LEPT+VAEILKDR                P G
Sbjct: 204 KPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRASWYRDCRHVDILHVIPTG 263

Query: 231 SA--------ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHF 282
           +           YALTTLA  RDFW LRYTS L+DGSLV+CERSL     GP+ P   +F
Sbjct: 264 NGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICERSLTQSTGGPSGPNTPNF 323

Query: 283 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ 342
           +RAE+LPSGYLIRPC+GGGS+I+IVDH+DL   SVPEVLRPLYES  +LAQK T AALR 
Sbjct: 324 IRAEVLPSGYLIRPCDGGGSMIYIVDHVDLNASSVPEVLRPLYESPKILAQKMTAAALRH 383

Query: 343 LRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT-VMGNDGMDDVTV 401
           +RQ+A E +     G GR+PA LR  SQRLSRGFN+AV+GF D+GW+ ++ +DG +D+T+
Sbjct: 384 IRQIAHESSGEMPYGVGRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSSLLSSDGAEDITI 443

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNI 461
            +NSSP+KL+G ++S +  F A+   ++CAKASMLLQNVPPAIL+RFLREHRSEWAD  +
Sbjct: 444 SINSSPNKLIGSHVSPSPFFSAMGGGIMCAKASMLLQNVPPAILVRFLREHRSEWADPGV 503

Query: 462 DVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
           D YSAA+++  P ++PG R G F G+QVILPLA T+EHEE +EVI+LEG G S E+ +M 
Sbjct: 504 DAYSAASLRANPYAVPGLRAGGFMGNQVILPLARTLEHEECLEVIRLEGHGFSHEEVLMS 563

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRT 580
           RDMFLLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD+  +  S  RT
Sbjct: 564 RDMFLLQLCSGVDENAPGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDVPSATRT 623

Query: 581 LDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIIS 640
           LDLASALE+G  G     + S+ +   RSV+TIAF+F+FE+H+++ VA MARQYVR +++
Sbjct: 624 LDLASALEVGSGGGLRALSDSSGTCTTRSVLTIAFQFSFENHLRDSVAAMARQYVRGVMA 683

Query: 641 SVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESIL 700
           SVQRVA+A++PS +     L+ P G+PEAL LA WI  SYR + G ++  S +EG++S L
Sbjct: 684 SVQRVAMAIAPSRLGPHIELKHPPGSPEALALATWIGRSYRAHTGTEIRWSDTEGADSPL 743

Query: 701 KNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEF 760
              W H+DA++CCSLK      FAN AG D+LETTLV +QD+ LE + DD G+KALFA+ 
Sbjct: 744 MPFWKHSDAILCCSLKPAFTLKFANSAGFDILETTLVNIQDLPLEAVLDDDGQKALFAQL 803

Query: 761 PQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            +IMQQG A L GG+C SSMGR  SYE+AVAWKV+ ++    C+  M +NW+F+
Sbjct: 804 SKIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLVNWTFI 857


>gi|115482560|ref|NP_001064873.1| Os10g0480200 [Oryza sativa Japonica Group]
 gi|75168160|sp|Q9AV49.1|HOX9_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX9; AltName:
           Full=HD-ZIP protein HOX9; AltName: Full=Homeodomain
           transcription factor HOX9; AltName: Full=OsHB2; AltName:
           Full=OsHox9
 gi|13384370|gb|AAK21338.1|AC024594_2 putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|31432701|gb|AAP54299.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|78708820|gb|ABB47795.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|113639482|dbj|BAF26787.1| Os10g0480200 [Oryza sativa Japonica Group]
          Length = 840

 Score = 1070 bits (2766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/828 (63%), Positives = 643/828 (77%), Gaps = 38/828 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D+GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNRRCR
Sbjct: 25  MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCR 84

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           +KQRKEASRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN Y +Q  Q+ +L   DTS
Sbjct: 85  DKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLG-NDTS 143

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CES VT      TPQ+P RDAS P+GLL+IAEETLTEFLSKATGTAV+WV MPGMKPGPD
Sbjct: 144 CESNVT------TPQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPD 197

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           S GIVA+SHGC GVAARACGLV LEPT++ EILKDRP                   G  I
Sbjct: 198 SFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTI 257

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP+    Q FVRAEM
Sbjct: 258 ELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEM 317

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T AALR +RQ+A
Sbjct: 318 LPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIA 377

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV +  N+  
Sbjct: 378 QETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNAK- 436

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
            K+   + S AN F      V+CAKASMLLQ+VPPA+L+RFLREHRSEWAD N D YSA+
Sbjct: 437 -KVRNTSTS-ANAF-VTPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSAS 493

Query: 468 AIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
           ++K   CSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG   + +D +M RD+ LL
Sbjct: 494 SLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLL 553

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASA 586
           QLC+G+DE ++G+C +L+ APID  F DDAPL+ SGFR+IPLD   + +   RTLDLAS+
Sbjct: 554 QLCTGIDEKSMGSCFQLVSAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAGRTLDLASS 613

Query: 587 LEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVA 646
           LE+G    + T + S +   +RSV+TIAF+F +E H+Q+ VATMARQYVRSI+SSVQRV+
Sbjct: 614 LEVGSTA-QPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVS 672

Query: 647 LALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHH 706
           +A+SPS     AG +   G PEA TLARWIC SY+ +LGV+LL+ + +  E++LK LW +
Sbjct: 673 MAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDY 732

Query: 707 TDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQ 766
            DA++CCS K  PVFTFAN+ GL+MLET+LVALQD++L+KIFD+ GRKAL+ E P++M+Q
Sbjct: 733 EDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQ 792

Query: 767 GFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           G+  L GG+CLS MGR VS+E+AVAWKVL E+   HC+ F F+NWSFV
Sbjct: 793 GYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 840


>gi|222613019|gb|EEE51151.1| hypothetical protein OsJ_31913 [Oryza sativa Japonica Group]
          Length = 816

 Score = 1068 bits (2761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/828 (63%), Positives = 643/828 (77%), Gaps = 38/828 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D+GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNRRCR
Sbjct: 1   MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCR 60

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           +KQRKEASRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN Y +Q  Q+ +L   DTS
Sbjct: 61  DKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLG-NDTS 119

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CES VT      TPQ+P RDAS P+GLL+IAEETLTEFLSKATGTAV+WV MPGMKPGPD
Sbjct: 120 CESNVT------TPQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPD 173

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           S GIVA+SHGC GVAARACGLV LEPT++ EILKDRP                   G  I
Sbjct: 174 SFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTI 233

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP+    Q FVRAEM
Sbjct: 234 ELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEM 293

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T AALR +RQ+A
Sbjct: 294 LPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIA 353

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV +  N+  
Sbjct: 354 QETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNAK- 412

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
            K+   + S AN F      V+CAKASMLLQ+VPPA+L+RFLREHRSEWAD N D YSA+
Sbjct: 413 -KVRNTSTS-ANAF-VTPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSAS 469

Query: 468 AIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
           ++K   CSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG   + +D +M RD+ LL
Sbjct: 470 SLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLL 529

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASA 586
           QLC+G+DE ++G+C +L+ APID  F DDAPL+ SGFR+IPLD   + +   RTLDLAS+
Sbjct: 530 QLCTGIDEKSMGSCFQLVSAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAGRTLDLASS 589

Query: 587 LEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVA 646
           LE+G    + T + S +   +RSV+TIAF+F +E H+Q+ VATMARQYVRSI+SSVQRV+
Sbjct: 590 LEVGSTA-QPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVS 648

Query: 647 LALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHH 706
           +A+SPS     AG +   G PEA TLARWIC SY+ +LGV+LL+ + +  E++LK LW +
Sbjct: 649 MAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDY 708

Query: 707 TDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQ 766
            DA++CCS K  PVFTFAN+ GL+MLET+LVALQD++L+KIFD+ GRKAL+ E P++M+Q
Sbjct: 709 EDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQ 768

Query: 767 GFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           G+  L GG+CLS MGR VS+E+AVAWKVL E+   HC+ F F+NWSFV
Sbjct: 769 GYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 816


>gi|125542090|gb|EAY88229.1| hypothetical protein OsI_09681 [Oryza sativa Indica Group]
          Length = 857

 Score = 1066 bits (2757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/862 (61%), Positives = 649/862 (75%), Gaps = 59/862 (6%)

Query: 1   MAMSCKDG----KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSN 56
           M  S  DG    K   +D+GKYVRYTPEQVEALER+Y +CPKP+S RRQQL+RECPIL+N
Sbjct: 7   MRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILAN 66

Query: 57  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGY 116
           IEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN +
Sbjct: 67  IEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAH 126

Query: 117 FRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATG 175
            RQ  Q+T LA  DTSCES VT      TPQ+P RDAS P+GLLSIAEETLTEFLSKATG
Sbjct: 127 MRQQLQNTPLA-NDTSCESNVT------TPQNPLRDASNPSGLLSIAEETLTEFLSKATG 179

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------- 228
           TA++WVQMPGMKPGPDSVGIVAISHGC GVAARACGLV LEPT+V EILKDRP       
Sbjct: 180 TAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCR 239

Query: 229 -----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  +      LYA TTL PARDFW LRYT+ +EDGSLVVCERSL    
Sbjct: 240 NLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSG 299

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GP+    Q +VRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+
Sbjct: 300 GGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVV 359

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQK T AALR +RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW++M
Sbjct: 360 AQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIM 419

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           G DG++DV +  NS+       N   A G P     ++CAKASMLLQ+VPPA+L+RFLRE
Sbjct: 420 GGDGVEDVVIACNSTKKIRSNSNAGIAFGAPG---GIICAKASMLLQSVPPAVLVRFLRE 476

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGV 510
           HRSEWAD NID Y A+ +K   CSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG 
Sbjct: 477 HRSEWADYNIDAYLASTLKTSACSLPGLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQ 536

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
             + ++A++ RD+ LLQLC+G+DE +VG+  +L+FAPID  F D+ PL+ SGFR+IPLD 
Sbjct: 537 PLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID-DFPDETPLISSGFRVIPLDM 595

Query: 571 ---------------GK---ETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMT 612
                          GK   + +S  RTLDLAS+LE+G A  +A+ + S +   +RSV+T
Sbjct: 596 KTLELIEAFGFKYSLGKIKQDGASSGRTLDLASSLEVGSATAQASGDASADDCNLRSVLT 655

Query: 613 IAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTL 672
           IAF+F +E H+Q+ VA MARQYVRSI+S+VQRV++A+SPS     AG R   G PEA TL
Sbjct: 656 IAFQFPYELHLQDSVAAMARQYVRSIVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATL 715

Query: 673 ARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDML 732
           ARW+C SY  +LGV+LL  S   +E +LK LWH+ DA++CCS K  PVFTFAN+AGLDML
Sbjct: 716 ARWVCQSYHYHLGVELLSQSDGDAEQLLKMLWHYQDAILCCSFKEKPVFTFANKAGLDML 775

Query: 733 ETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAW 792
           ET+LVALQD+TL++IFD+ G++ALF+  P++M+QG   L  G+C+S MGR VS+++AVAW
Sbjct: 776 ETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQGHVYLPSGVCMSGMGRHVSFDQAVAW 835

Query: 793 KVLNEEETAHCICFMFINWSFV 814
           KVL E+   HC+ F F+NWSFV
Sbjct: 836 KVLAEDSNVHCLAFCFVNWSFV 857


>gi|242039345|ref|XP_002467067.1| hypothetical protein SORBIDRAFT_01g019120 [Sorghum bicolor]
 gi|241920921|gb|EER94065.1| hypothetical protein SORBIDRAFT_01g019120 [Sorghum bicolor]
          Length = 838

 Score = 1063 bits (2750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/828 (62%), Positives = 631/828 (76%), Gaps = 38/828 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D GKYVRYTPEQVE LER+Y ECPKPSS RRQQL+RECPILSNIEPKQIKVWFQNRRCR
Sbjct: 23  MDTGKYVRYTPEQVETLERVYAECPKPSSARRQQLLRECPILSNIEPKQIKVWFQNRRCR 82

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           +KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN Y +Q  Q+ +LA  D S
Sbjct: 83  DKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLA-NDAS 141

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           C+S VT+  +        RDAS P+GLLSIAEETLTEFLSKATGTA++WVQMPGMKPGPD
Sbjct: 142 CDSNVTAPANL-------RDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMPGMKPGPD 194

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           S GIV ISHG  GVAARACGLV LEPT++ EILKDRP                   G  I
Sbjct: 195 SFGIVTISHGGRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMLPAGNGGTI 254

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 +YA TTL PARDFW LRYT+ +EDGSLVVCERSL    +G +    Q FVRAEM
Sbjct: 255 ELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGDGQSAATAQQFVRAEM 314

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYL+R CEGGGSI+ IVDH+DL+ WSVPEVLRPLYESS V+AQK T AALR LRQ+A
Sbjct: 315 LPSGYLVRQCEGGGSIVRIVDHLDLDAWSVPEVLRPLYESSRVVAQKMTTAALRHLRQIA 374

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW++M  DG++DV +  NS  
Sbjct: 375 QETSGEVVYAMGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMAGDGIEDVIIACNSKK 434

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
            +  G N + A G P     ++CAKASMLLQ+VPPA+L+RFLREHRSEWAD N D YSA+
Sbjct: 435 IR-SGSNPATAFGAPG---GIICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSAS 490

Query: 468 AIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
           A+K  PCSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG   + ++ ++ RD+ LL
Sbjct: 491 ALKTSPCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQTLTHDEGLLSRDIHLL 550

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASA 586
           QLC+G+DE ++G+C +L+FAPID  F DDAPL+ SGFR+IPLD   +  S  RTLDLAS+
Sbjct: 551 QLCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDIKTDGLSSGRTLDLASS 610

Query: 587 LEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVA 646
           LE+G    +A+ + S ++  +RSV+TIAF+F +E H+Q+ VA MARQYVRSI+S+VQRV+
Sbjct: 611 LEVGATTQQASADGSQDACNLRSVLTIAFQFPYEIHLQDTVAAMARQYVRSIVSAVQRVS 670

Query: 647 LALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHH 706
           +A+SPS      G +   G PEA TL RWIC SYR ++GVDL+  S +  ES+L+  W H
Sbjct: 671 MAISPSQSGLNTGQKIISGFPEAATLVRWICQSYRYHMGVDLVSHSDQAGESLLRMFWDH 730

Query: 707 TDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQ 766
            DAV+CCS K  PVFTF NQ G+DMLETTL+ALQD+TL+KIFD+ GRKAL AE P++M+Q
Sbjct: 731 QDAVLCCSFKEKPVFTFGNQMGIDMLETTLIALQDLTLDKIFDEPGRKALHAEVPKLMEQ 790

Query: 767 GFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           G+A L  G+CLS MGR VSYE AVAWKVL E+   HC+ F F+NWSFV
Sbjct: 791 GYAYLPAGVCLSGMGRHVSYEEAVAWKVLGEDGNVHCLAFCFVNWSFV 838


>gi|24431605|gb|AAN61485.1| Putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|125584645|gb|EAZ25309.1| hypothetical protein OsJ_09120 [Oryza sativa Japonica Group]
          Length = 857

 Score = 1063 bits (2749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/862 (61%), Positives = 648/862 (75%), Gaps = 59/862 (6%)

Query: 1   MAMSCKDG----KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSN 56
           M  S  DG    K   +D+GKYVRYTPEQVEALER+Y +CPKP+S RRQQL+RECPIL+N
Sbjct: 7   MRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILAN 66

Query: 57  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGY 116
           IEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN +
Sbjct: 67  IEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAH 126

Query: 117 FRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATG 175
            RQ  Q+T LA  DTSCES VT      TPQ+P RDAS P+GLLSIAEETLTEFLSKATG
Sbjct: 127 MRQQLQNTPLA-NDTSCESNVT------TPQNPLRDASNPSGLLSIAEETLTEFLSKATG 179

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------- 228
           TA++WVQMPGMKPGPDSVGIVAISHGC GVAARACGLV LEPT+V EILKDRP       
Sbjct: 180 TAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCR 239

Query: 229 -----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  +      LYA TTL PARDFW LRYT+ +EDGSLVVCERSL    
Sbjct: 240 NLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSG 299

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GP+    Q +VRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+
Sbjct: 300 GGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVV 359

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQK T AALR +RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW++M
Sbjct: 360 AQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIM 419

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           G DG++DV +  NS+       N   A G P     ++CAKASMLLQ+VPPA+L+RFLRE
Sbjct: 420 GGDGVEDVVIACNSTKKIRSNSNAGIAFGAPG---GIICAKASMLLQSVPPAVLVRFLRE 476

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGV 510
           HRSEWAD NID Y A+ +K   CSL G R   F GSQ+I+PLAHT+E+EE +EV++LEG 
Sbjct: 477 HRSEWADYNIDAYLASTLKTSACSLTGLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQ 536

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
             + ++A++ RD+ LLQLC+G+DE +VG+  +L+FAPID  F D+ PL+ SGFR+IPLD 
Sbjct: 537 PLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID-DFPDETPLISSGFRVIPLDM 595

Query: 571 ---------------GK---ETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMT 612
                          GK   + +S  RTLDLAS+LE+G A  +A+ + S +   +RSV+T
Sbjct: 596 KTLELIEAFGFKYSLGKIKQDGASSGRTLDLASSLEVGSATAQASGDASADDCNLRSVLT 655

Query: 613 IAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTL 672
           IAF+F +E H+Q+ VA MARQYVRSI+S+VQRV++A+SPS     AG R   G PEA TL
Sbjct: 656 IAFQFPYELHLQDSVAAMARQYVRSIVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATL 715

Query: 673 ARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDML 732
           ARW+C SY  +LGV+LL  S   +E +LK LWH+ DA++CCS K  PVFTFAN+AGLDML
Sbjct: 716 ARWVCQSYHYHLGVELLSQSDGDAEQLLKMLWHYQDAILCCSFKEKPVFTFANKAGLDML 775

Query: 733 ETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAW 792
           ET+LVALQD+TL++IFD+ G++ALF+  P++M+QG   L  G+C+S MGR VS+++AVAW
Sbjct: 776 ETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQGHVYLPSGVCMSGMGRHVSFDQAVAW 835

Query: 793 KVLNEEETAHCICFMFINWSFV 814
           KVL E+   HC+ F F+NWSFV
Sbjct: 836 KVLAEDSNVHCLAFCFVNWSFV 857


>gi|297793627|ref|XP_002864698.1| hypothetical protein ARALYDRAFT_496218 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310533|gb|EFH40957.1| hypothetical protein ARALYDRAFT_496218 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 844

 Score = 1063 bits (2749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/837 (64%), Positives = 639/837 (76%), Gaps = 52/837 (6%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIREC IL+NIEPKQIKVWFQNRRCR+K
Sbjct: 23  SGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVWFQNRRCRDK 82

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCE 134
           QRKEASRLQ+VNRKL+AMNKLLMEENDRLQKQVSQLV ENGY +Q  Q TT+   D SCE
Sbjct: 83  QRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCENGYMKQ--QLTTVVCNDPSCE 140

Query: 135 SVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSV 193
           SVVT      TPQH  RDAS PAGL+SIAEETL EFLSKATGTAV+WVQMPGMKPGPDSV
Sbjct: 141 SVVT------TPQHSLRDASSPAGLISIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSV 194

Query: 194 GIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI-- 233
           GI AIS  CSGVAARACGLV LEP ++AEILKDRP                   G  I  
Sbjct: 195 GIFAISQRCSGVAARACGLVSLEPMKIAEILKDRPSWFRDCRSLEVFTLFPAGNGGTIEL 254

Query: 234 ----LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLP 289
                YA TTLAPARDFW LRYT+ L++GS VVCERSL     GP       FVRAEML 
Sbjct: 255 VYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEMLS 314

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQE 349
           SGYLIRPC+GGGSIIHIVDH++LE WSVP+VLRPLYESS V+AQK T++ALR +RQ+AQE
Sbjct: 315 SGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALRYIRQLAQE 374

Query: 350 VTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD- 408
                V G GR+PA LR  SQRLSRGFN+AVNGF D+GW+ M  DG +D+ V +NS+   
Sbjct: 375 TNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIVAINSTKHL 434

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAA 468
             +  +LSF  G       VLCAKASMLLQNVPPA+L+RFLREHRSEWAD N+D YSAA 
Sbjct: 435 NNISNSLSFLGG-------VLCAKASMLLQNVPPAVLIRFLREHRSEWADFNVDAYSAAT 487

Query: 469 IKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQ 527
           +K G  + PG R   F GSQ+I+PL HTIEHEE +EV++LEG   + EDA M RD+ LLQ
Sbjct: 488 LKAGTFAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQ 547

Query: 528 LCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET-----SSPNRTLD 582
           +C+G+DENAVG C+ELIFAPI+  F DDAPL+PSGFR+IP+D+         ++ +RTLD
Sbjct: 548 ICTGIDENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDAQDLLTANHRTLD 607

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           L S+LE+GP+   A+ N S++S+  R ++TIAF+F FE+++QE+VA MA QYVRS+ISSV
Sbjct: 608 LTSSLEVGPSPENASGNSSSSSSSSRCILTIAFQFPFENNLQENVAGMACQYVRSVISSV 667

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS-ESILK 701
           QRVA+A+SPS IS   G +   G+PEA+TLA+WI  SY  +LG +L+   S GS +S+LK
Sbjct: 668 QRVAMAVSPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSELMTIDSLGSNDSVLK 727

Query: 702 NLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFP 761
            LW H DA++CCSLK  PVF FANQAGLDMLETTLVALQDITLEKIFD+ GRKAL ++F 
Sbjct: 728 LLWDHQDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKALCSDFA 787

Query: 762 QIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE----TAHCICFMFINWSFV 814
           ++MQQGFACL  GIC+S+MGR VSYE+AVAWKV    E      HC+ F F+NWSFV
Sbjct: 788 KLMQQGFACLPSGICVSTMGRHVSYEQAVAWKVFAASEDNNNNLHCLAFSFVNWSFV 844


>gi|357146669|ref|XP_003574071.1| PREDICTED: homeobox-leucine zipper protein HOX9-like [Brachypodium
           distachyon]
          Length = 841

 Score = 1062 bits (2746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/828 (62%), Positives = 643/828 (77%), Gaps = 39/828 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D+GKYVRYTPEQVEALER+Y ECPKP+S RRQQL+RECPILSNIE +QIKVWFQNRRCR
Sbjct: 27  MDSGKYVRYTPEQVEALERVYAECPKPTSTRRQQLLRECPILSNIEARQIKVWFQNRRCR 86

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           +KQRKE+SRLQAVNRKL+AMNKLLMEEN+RLQKQVSQLV+EN Y +Q  Q+ +LA  DTS
Sbjct: 87  DKQRKESSRLQAVNRKLSAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLA-NDTS 145

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CES VT      TPQ+PPRDAS PAGLL+IAEETLTEFLSKATGTAV+WV MPGMKPGPD
Sbjct: 146 CESNVT------TPQNPPRDASNPAGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPD 199

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           S GIVAISHGC GVAARACGLV LEPT++ EILKDRP                   G  I
Sbjct: 200 SFGIVAISHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTQLPAGNGGTI 259

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP+    Q FVRAEM
Sbjct: 260 ELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEM 319

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYL+RPC+GGGSI+H+VDH+DLE WSVPEVLRPLYESS V+AQK T AALR +RQ+A
Sbjct: 320 LPSGYLVRPCDGGGSIVHMVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIA 379

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV +  NS  
Sbjct: 380 QETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNS-- 437

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
            K +  N +  + F +    V+CAKASMLLQ+VPPA+L+RFLREHRSEWAD N D YSA+
Sbjct: 438 -KKIRSNTAAPSAFES-PGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSAS 495

Query: 468 AIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
           A+K   CSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG   + ++ ++ RD+ LL
Sbjct: 496 ALKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEG--QALDEGLLSRDIHLL 553

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASA 586
           Q C+G+DE ++G+C +L+FAPID  F DDAPL+ SGFR+IPLD   + +   RTLDLAS+
Sbjct: 554 QFCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGTPTGRTLDLASS 613

Query: 587 LEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVA 646
           LE+G    +A  N S + + +RSV+TIAF+F +E H+Q+ VATMARQYVRSI+S+VQRV+
Sbjct: 614 LEVGSTTLQAPGNTSLDDSNLRSVLTIAFQFPYEMHLQDTVATMARQYVRSIVSAVQRVS 673

Query: 647 LALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHH 706
           +A+SPS     A  +   G PEA TLARWIC SY+ +LGV+L++ + E  ES+L+ LW +
Sbjct: 674 MAISPSRSGLNAEQKIISGFPEAATLARWICQSYQFHLGVELVRQADEAGESLLRMLWDY 733

Query: 707 TDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQ 766
            DA++CCS K  PVFTFAN+ G++MLET+ +ALQD++L+KIFD+ GRKAL++E P++M+Q
Sbjct: 734 EDAILCCSFKEKPVFTFANEMGINMLETSFLALQDLSLDKIFDEAGRKALYSEIPKLMEQ 793

Query: 767 GFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           G+  L  G+CLS MGR VS+E+A+AWKVL E+   HC+ F F+NWSFV
Sbjct: 794 GYVYLPAGVCLSGMGRHVSFEQAIAWKVLGEDNNVHCLAFCFVNWSFV 841


>gi|224131988|ref|XP_002328157.1| predicted protein [Populus trichocarpa]
 gi|60327623|gb|AAX19051.1| class III HD-Zip protein 2 [Populus trichocarpa]
 gi|222837672|gb|EEE76037.1| predicted protein [Populus trichocarpa]
          Length = 844

 Score = 1061 bits (2745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/843 (64%), Positives = 647/843 (76%), Gaps = 62/843 (7%)

Query: 14  DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCRE 73
           D+GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPIL+NIEPKQIKVWFQNRRCRE
Sbjct: 22  DDGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILANIEPKQIKVWFQNRRCRE 81

Query: 74  KQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
           KQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENG+ RQ  Q+    T D SC
Sbjct: 82  KQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMRQQLQTV---TTDASC 138

Query: 134 ESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDS 192
           +SVV       TPQH  RDA +PAGLLSIAEETL+EFL+KATGTA+EWVQMPGMKPGPDS
Sbjct: 139 DSVVA------TPQHSLRDANNPAGLLSIAEETLSEFLAKATGTALEWVQMPGMKPGPDS 192

Query: 193 VGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR----------------PRGS----- 231
           +GI +IS  C GVAARACGLV LEP ++AEILKDR                P G+     
Sbjct: 193 IGIFSISQRCGGVAARACGLVSLEPKKIAEILKDRSSWFRDCRNLEVFTMFPAGNGGTIE 252

Query: 232 ---AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
              + +YA TTLAPARD W LRYT+ LE+GSLVVCERSL     GP       FVRAEML
Sbjct: 253 LVYSQIYAPTTLAPARDMWTLRYTTSLENGSLVVCERSLSGYGAGPDAAAAAQFVRAEML 312

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQ 348
           PSGYLIRPCE GGSIIHIVDH++L+ WSVPEVLRPLYESS  +AQK T+AALR +RQ+A 
Sbjct: 313 PSGYLIRPCE-GGSIIHIVDHLNLQAWSVPEVLRPLYESSKAVAQKMTIAALRYVRQVAH 371

Query: 349 EVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           E +   V G GR+PA LR  +QRLSRGFN+A+NGF D+GW++M  DG +DV + VNS+ +
Sbjct: 372 ETSGEVVYGLGRQPAVLRTFNQRLSRGFNDAINGFNDDGWSLMNADGAEDVIIAVNSTKN 431

Query: 409 KLMGLN-----LSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
            L+G N     LSF  G       +LCAKASMLLQNV PA+L+ FLREH +EWAD ++D 
Sbjct: 432 -LIGANNSAHSLSFLGG-------ILCAKASMLLQNVHPAVLVCFLREHHAEWADFSVDA 483

Query: 464 YSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           YSAA  K G  + PG R   F GSQ+ +PL HTIE E+ +EVI+LEG   + EDA + +D
Sbjct: 484 YSAALWKAGSYAYPGMRPMRFTGSQITMPLGHTIEQEDLLEVIRLEGHSFAQEDAFVSQD 543

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSG----KETSSPN 578
           + LLQ+CSG+DENAVG C+EL+FAPID +F DDAPLLPSGFRII L+S     +E  + N
Sbjct: 544 IHLLQICSGIDENAVGACSELVFAPIDETFPDDAPLLPSGFRIISLESKAKDTQEVLTTN 603

Query: 579 RTLDLASALEIGPAGNR-ATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
            TLDL S+LE G A N  A +  S +S  +RSV+TIAF+F FES++Q++VATMARQYVRS
Sbjct: 604 CTLDLTSSLEAGLAINHTAVDGSSCHS--LRSVLTIAFQFPFESNLQDNVATMARQYVRS 661

Query: 638 IISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYR-----CYLGVDLLKSS 692
           +ISSVQRVA+A+SPS +S   G +   G+PEALTLA WIC S+R      +LG +LL+S 
Sbjct: 662 VISSVQRVAMAISPSGLSPVLGPKLSAGSPEALTLAHWICQSHRQVLLNYHLGAELLRSD 721

Query: 693 SEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHG 752
           S G +S+LK+LWHH DA++CCSLK+LPVF FANQAGLDMLETTLVALQDITL+KIF++ G
Sbjct: 722 SVGGDSVLKHLWHHPDAILCCSLKSLPVFIFANQAGLDMLETTLVALQDITLDKIFNESG 781

Query: 753 RKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETA-HCICFMFINW 811
           R+AL+ EF ++MQQGFACL  GIC+S+MGR VSYE+AVAWKVL+ EE A HCI F F+NW
Sbjct: 782 RQALYTEFAKLMQQGFACLPAGICMSTMGRNVSYEQAVAWKVLSAEENAVHCIAFSFVNW 841

Query: 812 SFV 814
           SF+
Sbjct: 842 SFL 844


>gi|37694044|gb|AAQ98963.1| homeodomain leucine-zipper protein Hox9 [Oryza sativa Japonica
           Group]
          Length = 840

 Score = 1057 bits (2734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 523/828 (63%), Positives = 640/828 (77%), Gaps = 38/828 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D+GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNRRCR
Sbjct: 25  MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCR 84

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           +KQRKEASRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN Y +Q  Q+ +L   DTS
Sbjct: 85  DKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLG-NDTS 143

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CES VT      T Q+P RDAS P+GLL+IAEETLTEFLSKATGTAV+WV MPGMKPGPD
Sbjct: 144 CESNVT------TLQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPD 197

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           S GIVA+SHGC GVAARACGLV LEPT++ EILKDRP                   G  I
Sbjct: 198 SFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTI 257

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP+    Q FVRAEM
Sbjct: 258 ELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEM 317

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           L SGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T AALR +RQ+A
Sbjct: 318 LTSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIA 377

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV +  N+  
Sbjct: 378 QETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNAR- 436

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
            K+   + S AN F      V+CAKASMLLQ+VPPA+L+RFLREHRSEWAD N D YSA+
Sbjct: 437 -KVRNTSTS-ANAF-VTPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSAS 493

Query: 468 AIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
           ++K   CSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG   + +D +M RD+ LL
Sbjct: 494 SLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLL 553

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASA 586
           QLC+G+DE ++G+C +L+ APID  F DDA L+ SGFR+IPL+   + +   RTLDLAS+
Sbjct: 554 QLCTGIDEKSMGSCFQLVSAPIDELFPDDAQLISSGFRVIPLNMKTDGTPAGRTLDLASS 613

Query: 587 LEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVA 646
           LE+G    + T + S +   +RSV+TIAF+F +E H+Q+ VATMARQYVRSI+SSVQRV+
Sbjct: 614 LEVGSTA-QPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVS 672

Query: 647 LALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHH 706
           +A+SPS     AG +   G PEA TLARWIC SY+ +LGV+LL+ + +  E++LK LW +
Sbjct: 673 MAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDY 732

Query: 707 TDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQ 766
            DA++CCS K  PVFTFAN+ GL+MLET+LVALQD++L+KIFD+ GRKAL+ E P++M+Q
Sbjct: 733 EDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQ 792

Query: 767 GFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           G+  L GG+CLS MGR VS+E+AVAWKVL E+   HC+ F F+NWSFV
Sbjct: 793 GYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 840


>gi|414877999|tpg|DAA55130.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 953

 Score = 1057 bits (2734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/843 (62%), Positives = 645/843 (76%), Gaps = 37/843 (4%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
           G    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQ LIR+CPIL NIEPKQIKVWFQ
Sbjct: 112 GAAPQVDAGKYVRYTPEQVEALERVYSECPKPSSLRRQHLIRDCPILRNIEPKQIKVWFQ 171

Query: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA 127
           NRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVS+LV++NGY +    S ++A
Sbjct: 172 NRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVFDNGYMKNRLHSPSVA 231

Query: 128 TKDTSCESVVTSGQHHLTPQ----HPP-RDA-SPAGLLSIAEETLTEFLSKATGTAVEWV 181
           T DTSCESVVTSGQH+        HPP RDA +PAGLL+IAEETL EF+SKATGTAV WV
Sbjct: 232 TTDTSCESVVTSGQHNQQQNPAVLHPPQRDANNPAGLLAIAEETLAEFMSKATGTAVNWV 291

Query: 182 QMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR-------------- 227
           QM GMKPGPDSVGI+A+SH CSGVAARACGLV LEPT+VAEILKDR              
Sbjct: 292 QMVGMKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRASWYRDCRHVDVLH 351

Query: 228 --PRGSA--------ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMP 277
             P G+           YALTTLA  RDFW LRYTS L+DGSLV+CERSL     GP+ P
Sbjct: 352 VIPTGNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICERSLTQSTGGPSGP 411

Query: 278 PVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTM 337
              +F+RAE+LPSGYLIRPC+GGGS+I+IVDH++L   SVPEVLRPLYES  +LAQK T 
Sbjct: 412 NTPNFIRAEVLPSGYLIRPCDGGGSMIYIVDHVNLNACSVPEVLRPLYESPKILAQKMTA 471

Query: 338 AALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGN-DGM 396
           AALR +RQ+A E +     G GR+PA LR  SQRLSRGFN+AV+GF D+GW+ + N DG 
Sbjct: 472 AALRHIRQIAHESSGEMPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSCLLNTDGA 531

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           +D+TV +NSSP+KL+G ++S +  F A+   ++CAKASMLLQNVPPA+L+RFLREHRSEW
Sbjct: 532 EDITVTINSSPNKLVGSHVSASPLFSAMGGGIMCAKASMLLQNVPPALLVRFLREHRSEW 591

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           AD  ID YS A+++  P ++PG R G F G+QVILPLA T+EHEE +EVI+LEG G S E
Sbjct: 592 ADPGIDAYSVASLRANPYTVPGLRAGGFMGNQVILPLARTLEHEESLEVIRLEGHGFSHE 651

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET- 574
           + +M RDMFLLQLCSG+DE+A G CA+L+FAPID SFADDAPLLPSGFR+IPLD+  +  
Sbjct: 652 EVLMSRDMFLLQLCSGVDEDAPGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDVP 711

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTC-MRSVMTIAFEFAFESHMQEHVATMARQ 633
           ++  RTLDLASALE+G  G+    +   + TC  RSV+TIAF+F+FE+H++E VA MA+Q
Sbjct: 712 TATTRTLDLASALEVGSGGSGMRASCDGSGTCATRSVLTIAFQFSFENHLRESVAAMAKQ 771

Query: 634 YVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           YVR +++SVQRVA+A++PS + S+  L+ P G+PEAL LA WI  SYR + G ++  S +
Sbjct: 772 YVRGVMASVQRVAMAIAPSRLGSRIELKHPPGSPEALALATWIGRSYRAHTGTEIRWSDT 831

Query: 694 EGSESILKNLWHHTDAVMCCSLKALPVFT--FANQAGLDMLETTLVALQDITLEKIFDDH 751
           EG++S L   W H+DA++CCSLK  P FT  FAN AG D+LETT+V +QD+ LE + D+ 
Sbjct: 832 EGADSPLMLFWKHSDAILCCSLKP-PAFTLKFANSAGFDILETTMVNIQDLPLEAVLDEE 890

Query: 752 GRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINW 811
           G+KAL A+ P IMQQG A L GG+C SSMGR  SYE+AVAWKV+ ++    C+  M  NW
Sbjct: 891 GQKALSAQLPAIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANW 950

Query: 812 SFV 814
           +F+
Sbjct: 951 TFI 953


>gi|414871038|tpg|DAA49595.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 835

 Score = 1056 bits (2732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/834 (62%), Positives = 636/834 (76%), Gaps = 40/834 (4%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           K+G +D GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+RECPILSNIE KQIKVWFQN
Sbjct: 14  KSG-MDTGKYVRYTPEQVEALERVYAECPKPSSARRQQLLRECPILSNIEAKQIKVWFQN 72

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLAT 128
           RRCR+KQR E+SRLQ+VNRKLTAMNKLLMEEN+RLQKQVSQLV+EN Y +Q  Q+ +LAT
Sbjct: 73  RRCRDKQRNESSRLQSVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLAT 132

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            D SCES  T      TP +  RDAS P+GLL+IAEETLTEFLSKATGTA++WVQMPGMK
Sbjct: 133 -DASCESNAT------TPANL-RDASNPSGLLAIAEETLTEFLSKATGTAIDWVQMPGMK 184

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDS GIV ISHG  GVAARACGLV LEPT++ EILKDRP                   
Sbjct: 185 PGPDSFGIVTISHGGRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVYTMLPAGN 244

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I      +YA TTL PARDFW LRYT+ +EDGSLVVCERSL    +G +    Q FV
Sbjct: 245 GGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGDGQSAATTQQFV 304

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYL+R CEGGGSI+ IVDH+DL+ WSVPEVLRPLYESS V+AQK T  ALR L
Sbjct: 305 RAEMLPSGYLVRQCEGGGSIVRIVDHLDLDAWSVPEVLRPLYESSRVVAQKMTTTALRHL 364

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VM  DGM+DV +  
Sbjct: 365 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMCGDGMEDVIIAC 424

Query: 404 NSSPDKLMGLNLSFANGFPAVS-NAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNID 462
           NS   K +  + + A GF A     ++CAKASMLLQ+VPPA+L+RFLREHRSEWAD N D
Sbjct: 425 NS---KKIRSSSNPATGFGAPGPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNFD 481

Query: 463 VYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPR 521
            YSA+A+K  PCSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG   + ++ ++ R
Sbjct: 482 AYSASALKTSPCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQTLTHDEGLLSR 541

Query: 522 DMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTL 581
           D+ LLQLC+GMDE ++G+C +L+FAPID  F DDAPL+ SGFR+IPLD   +     RTL
Sbjct: 542 DIHLLQLCTGMDEKSMGSCFQLVFAPIDELFPDDAPLVSSGFRVIPLDIKTDGPPSGRTL 601

Query: 582 DLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISS 641
           DLAS+LE+G    +   N S +   +RSV+TIAF+F +E+H+Q+ VA MARQYVRSI+S+
Sbjct: 602 DLASSLEVGATTQQVAGNGSQDVCNLRSVLTIAFQFPYETHLQDTVAAMARQYVRSIVSA 661

Query: 642 VQRVALALSPSNIS-SQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESIL 700
           VQRV++A+SPS+   + AG +   G+PEA TL RWIC SYR +LGVDL+  S +  ES+L
Sbjct: 662 VQRVSMAISPSHSGLNTAGQKLISGSPEAATLVRWICQSYRYHLGVDLVSHSDQAGESLL 721

Query: 701 KNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEF 760
           +  W H DAV+CCS K  PVFTF NQ G+DMLETTLVALQD+TL+KIFD+ GRKAL AE 
Sbjct: 722 RMFWDHQDAVLCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKIFDEPGRKALHAEV 781

Query: 761 PQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           P++M+QG+A L  G+CLS MGR VSYE+AVAWKVL E+   HC+ F F+NWSF+
Sbjct: 782 PKLMEQGYAYLPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFI 835


>gi|226502384|ref|NP_001142394.1| uncharacterized protein LOC100274567 [Zea mays]
 gi|224030609|gb|ACN34380.1| unknown [Zea mays]
 gi|323388783|gb|ADX60196.1| HB homeobox transcription factor [Zea mays]
          Length = 854

 Score = 1056 bits (2732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/843 (62%), Positives = 645/843 (76%), Gaps = 37/843 (4%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
           G    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQ LIR+CPIL NIEPKQIKVWFQ
Sbjct: 13  GAAPQVDAGKYVRYTPEQVEALERVYSECPKPSSLRRQHLIRDCPILRNIEPKQIKVWFQ 72

Query: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA 127
           NRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVS+LV++NGY +    S ++A
Sbjct: 73  NRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVFDNGYMKNRLHSPSVA 132

Query: 128 TKDTSCESVVTSGQHHLTPQ----HPP-RDA-SPAGLLSIAEETLTEFLSKATGTAVEWV 181
           T DTSCESVVTSGQH+        HPP RDA +PAGLL+IAEETL EF+SKATGTAV WV
Sbjct: 133 TTDTSCESVVTSGQHNQQQNPAVLHPPQRDANNPAGLLAIAEETLAEFMSKATGTAVNWV 192

Query: 182 QMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR-------------- 227
           QM GMKPGPDSVGI+A+SH CSGVAARACGLV LEPT+VAEILKDR              
Sbjct: 193 QMVGMKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRASWYRDCRHVDVLH 252

Query: 228 --PRGSA--------ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMP 277
             P G+           YALTTLA  RDFW LRYTS L+DGSLV+CERSL     GP+ P
Sbjct: 253 VIPTGNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICERSLTQSTGGPSGP 312

Query: 278 PVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTM 337
              +F+RAE+LPSGYLIRPC+GGGS+I+IVDH++L   SVPEVLRPLYES  +LAQK T 
Sbjct: 313 NTPNFIRAEVLPSGYLIRPCDGGGSMIYIVDHVNLNACSVPEVLRPLYESPKILAQKMTA 372

Query: 338 AALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGN-DGM 396
           AALR +RQ+A E +     G GR+PA LR  SQRLSRGFN+AV+GF D+GW+ + N DG 
Sbjct: 373 AALRHIRQIAHESSGEMPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSCLLNTDGA 432

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           +D+TV +NSSP+KL+G ++S +  F A+   ++CAKASMLLQNVPPA+L+RFLREHRSEW
Sbjct: 433 EDITVTINSSPNKLVGSHVSASPLFSAMGGGIMCAKASMLLQNVPPALLVRFLREHRSEW 492

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           AD  ID YS A+++  P ++PG R G F G+QVILPLA T+EHEE +EVI+LEG G S E
Sbjct: 493 ADPGIDAYSVASLRANPYTVPGLRAGGFMGNQVILPLARTLEHEESLEVIRLEGHGFSHE 552

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET- 574
           + +M RDMFLLQLCSG+DE+A G CA+L+FAPID SFADDAPLLPSGFR+IPLD+  +  
Sbjct: 553 EVLMSRDMFLLQLCSGVDEDAPGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDVP 612

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTC-MRSVMTIAFEFAFESHMQEHVATMARQ 633
           ++  RTLDLASALE+G  G+    +   + TC  RSV+TIAF+F+FE+H++E VA MA+Q
Sbjct: 613 TATTRTLDLASALEVGSGGSGMRASCDGSGTCATRSVLTIAFQFSFENHLRESVAAMAKQ 672

Query: 634 YVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           YVR +++SVQRVA+A++PS + S+  L+ P G+PEAL LA WI  SYR + G ++  S +
Sbjct: 673 YVRGVMASVQRVAMAIAPSRLGSRIELKHPPGSPEALALATWIGRSYRAHTGTEIRWSDT 732

Query: 694 EGSESILKNLWHHTDAVMCCSLKALPVFT--FANQAGLDMLETTLVALQDITLEKIFDDH 751
           EG++S L   W H+DA++CCSLK  P FT  FAN AG D+LETT+V +QD+ LE + D+ 
Sbjct: 733 EGADSPLMLFWKHSDAILCCSLKP-PAFTLKFANSAGFDILETTMVNIQDLPLEAVLDEE 791

Query: 752 GRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINW 811
           G+KAL A+ P IMQQG A L GG+C SSMGR  SYE+AVAWKV+ ++    C+  M  NW
Sbjct: 792 GQKALSAQLPAIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMLANW 851

Query: 812 SFV 814
           +F+
Sbjct: 852 TFI 854


>gi|326526073|dbj|BAJ93213.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 840

 Score = 1056 bits (2731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/826 (63%), Positives = 636/826 (76%), Gaps = 41/826 (4%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYTPEQVEALER+Y ECPKP+S RRQQL+RECPILSNIEP+QIKVWFQNRRCR+K
Sbjct: 30  SGKYVRYTPEQVEALERVYAECPKPTSTRRQQLLRECPILSNIEPRQIKVWFQNRRCRDK 89

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCE 134
           QRKE+SRLQAVNRKL+AMNKLLMEEN+RLQKQVSQLV+EN Y +Q  Q+ +LA  DTSCE
Sbjct: 90  QRKESSRLQAVNRKLSAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLAN-DTSCE 148

Query: 135 SVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSV 193
           S VT      TP +P RDAS PAGLL+IAEETLTEFLSKATGTAV+WV MPGMKPGPDS 
Sbjct: 149 SNVT------TPPNPLRDASNPAGLLAIAEETLTEFLSKATGTAVDWVPMPGMKPGPDSF 202

Query: 194 GIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI-- 233
           GIVAISHGC GVAARACGLV LEPT++ EILKDRP                   G  I  
Sbjct: 203 GIVAISHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMLPAGNGGTIEL 262

Query: 234 ----LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLP 289
               +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP+    Q FVRAEMLP
Sbjct: 263 VYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLP 322

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQE 349
           SGYL+RPC+GGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T AALR +RQ+AQE
Sbjct: 323 SGYLVRPCDGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQE 382

Query: 350 VTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDK 409
            +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VM  DG++DV +  NS   K
Sbjct: 383 TSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMAGDGIEDVIIACNS---K 439

Query: 410 LMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAI 469
            +  N +  N F A    V+CAKASMLLQNVPPA+L+RFLREHRSEWAD N D YSA+A+
Sbjct: 440 KIRSNNTAPNAFIA-PGGVICAKASMLLQNVPPAVLVRFLREHRSEWADYNFDAYSASAL 498

Query: 470 KVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
           K   CSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG   + ++ ++ RD+ LLQ 
Sbjct: 499 KSSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEG--QALDEGLLSRDIHLLQF 556

Query: 529 CSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALE 588
           C+G+DE ++G+C +L+FAPID  F DDAPL+ SGFR+IPLD   + +   RTLDLAS+LE
Sbjct: 557 CTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGAPTGRTLDLASSLE 616

Query: 589 IGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALA 648
            G    +A+ N   +   +RSV+TIAF+F +E H+Q+ VATMARQYVRSI+S+VQRV++A
Sbjct: 617 AGSTTLQASGN--ADDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSAVQRVSMA 674

Query: 649 LSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTD 708
           +SPS     A  +   G PEA TLARWIC SYR +LGV+L + + E  ES+L+ LW H D
Sbjct: 675 ISPSRSGLNAEQKIISGFPEAATLARWICQSYRFHLGVELFRQADEAGESLLRMLWDHED 734

Query: 709 AVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGF 768
           A++CCS K  PVFTFAN+ G++MLET+ VALQD++L+KIFD+ GRKAL++E P++M+QGF
Sbjct: 735 AILCCSFKEKPVFTFANEMGINMLETSFVALQDLSLDKIFDEAGRKALYSEIPKLMEQGF 794

Query: 769 ACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
             L GG+CLS MGR VS+E A+AWKV+ E+   HC+ F F+NWSFV
Sbjct: 795 VYLPGGVCLSGMGRHVSFENAIAWKVVGEDNNVHCLAFCFVNWSFV 840


>gi|45775302|gb|AAS77254.1| class III HD-Zip protein [Populus tremula x Populus alba]
          Length = 843

 Score = 1053 bits (2724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/837 (63%), Positives = 635/837 (75%), Gaps = 53/837 (6%)

Query: 14  DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCRE 73
           DNGKYVRYT EQVEALER+Y ECPKPSS+RRQQLIRECPIL+NIEPKQIKVWFQNRRCRE
Sbjct: 24  DNGKYVRYTSEQVEALERVYAECPKPSSLRRQQLIRECPILANIEPKQIKVWFQNRRCRE 83

Query: 74  KQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
           KQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV ENG+ +Q  Q+   A   +  
Sbjct: 84  KQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMQQQLQTAPAAADASCD 143

Query: 134 ESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDS 192
            +V T       PQH  RDA+ PAGLLS+AEETL EFLSKATGTAV+WVQMPGMKPGPDS
Sbjct: 144 SAVTT-------PQHSLRDANDPAGLLSLAEETLAEFLSKATGTAVDWVQMPGMKPGPDS 196

Query: 193 VGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR----------------PRGSA---- 232
           VGI AIS  CSGVAARACGLV LEPT++AEILKDR                P G+     
Sbjct: 197 VGIFAISQRCSGVAARACGLVSLEPTKLAEILKDRQSRFRDCRNLEPFTMFPAGNGGTIE 256

Query: 233 ----ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
                +YA TTLAPARDFW LRYT  LE+GSLVVC+RSL     GP       FVRAEML
Sbjct: 257 LLYRQIYAPTTLAPARDFWTLRYTISLENGSLVVCDRSLSGSGAGPNAAAAAQFVRAEML 316

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQ 348
           PSGYLIRPCEGGGSIIHIVDH++L+ WSVPEVLRPLYESS  +AQK T+ ALR +RQ+A 
Sbjct: 317 PSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPLYESSKAVAQKVTITALRHVRQIAH 376

Query: 349 EVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           E +   V G GR+PA LR  SQRLSRGFN+A+NGF D+GW++M +DG +DV + VN++ +
Sbjct: 377 ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSLMNSDGAEDVIIAVNTTKN 436

Query: 409 KLMGLN----LSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVY 464
            +   N    LSF  G       +LCAKASMLLQNVPPA+L+RFLREHRSEWAD ++D Y
Sbjct: 437 LISANNPAHSLSFLGG-------ILCAKASMLLQNVPPAVLVRFLREHRSEWADFSVDAY 489

Query: 465 SAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDM 523
           SAA++K G  + PG R   F GSQ+I+PL HTIE EE +EVI+LEG   + EDA + RD+
Sbjct: 490 SAASLKAGSYAYPGMRSMRFTGSQIIMPLGHTIEQEELLEVIRLEGHSFAQEDAFVSRDI 549

Query: 524 FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS----GKETSSPNR 579
            LLQ+CSG+DENAVG C+EL+FAPID  F DDAPLLPSGFR+IPL+S     +E  + NR
Sbjct: 550 HLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLLPSGFRVIPLESKTKDAQEALTTNR 609

Query: 580 TLDLASALEIGPAGNRATNNYSTNSTC-MRSVMTIAFEFAFESHMQEHVATMARQYVRSI 638
           TLDL S+LE+GP  N A+ +    S+C +RSV+TIAF+F FES++Q++VATMARQYVRS+
Sbjct: 610 TLDLTSSLEVGPVTNHASVD---GSSCHLRSVLTIAFQFPFESNLQDNVATMARQYVRSV 666

Query: 639 ISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSES 698
           ISSVQRVA A+SPS ++   G +   G+PEALTLA WIC SY  +LG +LL+S S G +S
Sbjct: 667 ISSVQRVATAISPSGLNPALGPKLSAGSPEALTLAHWICQSYCYHLGAELLRSDSVGGDS 726

Query: 699 ILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFA 758
           +LK+LWHH DA++CCSL+ALPVF FANQAGLDMLETTLVALQDITL+KIFD+ G KALF 
Sbjct: 727 VLKHLWHHPDAILCCSLEALPVFIFANQAGLDMLETTLVALQDITLDKIFDESGHKALFT 786

Query: 759 EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLN-EEETAHCICFMFINWSFV 814
           +F ++MQ   ACL  GIC+ ++    S E+ V+ K L  E  TAHCI F  +NW+F+
Sbjct: 787 DFAKVMQHVSACLPAGICMPTVWHNESDEQTVSCKELTAEHNTAHCIAFSSVNWTFL 843


>gi|302190096|dbj|BAJ14107.1| PHABULOSA [Juncus prismatocarpus subsp. leschenaultii]
          Length = 857

 Score = 1053 bits (2722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/853 (61%), Positives = 660/853 (77%), Gaps = 52/853 (6%)

Query: 12  SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRC 71
           ++D GKYVRYTPEQVEALER+Y+ECPKPSS++RQQLIRE P+L NIEPKQIKVWFQNRRC
Sbjct: 7   AMDGGKYVRYTPEQVEALERVYNECPKPSSLKRQQLIRENPLLVNIEPKQIKVWFQNRRC 66

Query: 72  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST-TLATKD 130
           REKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ   +  ++AT D
Sbjct: 67  REKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLHNQPSVATTD 126

Query: 131 TSCESVVTSGQHH-------------LTPQHPPRD-ASPAGLLSIAEETLTEFLSKATGT 176
            SC+SVV+ GQ               LT Q+PPRD  +PAGLL+IAEETL EFLSKATGT
Sbjct: 127 NSCDSVVSHGQKSQHGQQSQRGQQIALT-QNPPRDLNNPAGLLAIAEETLAEFLSKATGT 185

Query: 177 AVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR--------- 227
           +VEWV + GMKPGPDS+GI+A+S+ C+GVAARACGLV LEPT+VAEILKD+         
Sbjct: 186 SVEWVPLVGMKPGPDSMGIIAVSNNCTGVAARACGLVSLEPTKVAEILKDKMSWYRDCRR 245

Query: 228 -------PRGSA--------ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLK-NIQ 271
                  P G+           YA TT+APARDFW +RYT+ L+DGSLV+CERSL     
Sbjct: 246 LDVLTIIPTGNGGNIELIYMQTYAPTTIAPARDFWTVRYTTALDDGSLVICERSLTPTTT 305

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GP  P    FVRAEMLPSGYLIRPC+GGGS+IHIVDH+DL+ W+VPEV+RPLYES  VL
Sbjct: 306 GGPVGPTTAGFVRAEMLPSGYLIRPCDGGGSMIHIVDHVDLDAWNVPEVIRPLYESPKVL 365

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQKTT+AA+R +RQ+A E++       GR+PA LR  SQRLSRGFN+AVNGF D+GW+++
Sbjct: 366 AQKTTIAAMRYIRQIAHELSGEVSFTGGRQPAVLRTFSQRLSRGFNDAVNGFVDDGWSLL 425

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           G+DG DDV+V VNSSPDKL+G + S A  F ++   +LCAK+SMLLQNVPPA+L++FLRE
Sbjct: 426 GSDGSDDVSVAVNSSPDKLLGPHASLAL-FSSLGGGILCAKSSMLLQNVPPALLVQFLRE 484

Query: 452 HRSEWADNNIDVYSAAAIKV-GPCSLPGSRV--GTFGSQVILPLAHTIEHEEFMEVIKLE 508
           HR+EWAD ++D YSAA+++   P ++PG R   G + +QVILPLAHT+E+EE +EV++LE
Sbjct: 485 HRAEWADCSVDTYSAASLRSNNPFAVPGLRSNNGLWANQVILPLAHTVENEELLEVVRLE 544

Query: 509 G-VGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIP 567
           G  G + ++ ++ RDM+LLQLC+G+DENA G CA+L+FAPID S ADDAPLL SGFR+ P
Sbjct: 545 GHHGFNQDELVLSRDMYLLQLCNGIDENAPGACAQLVFAPIDESLADDAPLLASGFRLTP 604

Query: 568 LDSGKETSSPNRTLDLASALEIGPA-GNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEH 626
           L+   + ++  RTLDLAS LEI P  G+    + ST+++  RSV+T+AF+FA+E H++++
Sbjct: 605 LEPKNDGAAQTRTLDLASTLEIKPCNGSTRHASDSTSASHSRSVLTLAFQFAYEHHLRDN 664

Query: 627 VATMARQYVRSIISSVQRVALALSPSNISSQ---AGLRTPLGTPEALTLARWICHSYRCY 683
           VA MARQYVR++++SVQRVA+A+SPS + S     G++   G+PEA+TL  WI  SYR +
Sbjct: 665 VAIMARQYVRTVVASVQRVAMAISPSRVGSGVQLGGVKGSNGSPEAVTLVDWIVKSYRVH 724

Query: 684 LGVDLLKSSSEGS-ESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDI 742
            G +L+    + + +++LK LWHH+DA++CCSLKA P F+FANQAGLDMLETTL+ALQDI
Sbjct: 725 TGAELINGDCDSNGDALLKLLWHHSDAIVCCSLKASPEFSFANQAGLDMLETTLLALQDI 784

Query: 743 TLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE-TA 801
            LE + D+ GRK L +EF +IM QGF  L GGICLSSMGRPVSYE A+ WKVLN+++ +A
Sbjct: 785 RLESVLDESGRKNLCSEFSKIMHQGFGRLPGGICLSSMGRPVSYEEAIVWKVLNQDDSSA 844

Query: 802 HCICFMFINWSFV 814
           HC  FMF NWSFV
Sbjct: 845 HCFAFMFTNWSFV 857


>gi|15239411|ref|NP_200877.1| homeobox-leucine zipper protein REVOLUTA [Arabidopsis thaliana]
 gi|75203823|sp|Q9SE43.2|REV_ARATH RecName: Full=Homeobox-leucine zipper protein REVOLUTA; AltName:
           Full=HD-ZIP protein REV; AltName: Full=Homeodomain
           transcription factor REV; AltName: Full=Protein
           AMPHIVASAL VASCULAR BUNDLE 1; AltName: Full=Protein
           INTERFASCICULAR FIBERLESS 1
 gi|7229679|gb|AAF42938.1|AF233592_1 REVOLUTA [Arabidopsis thaliana]
 gi|24416437|gb|AAF15262.2|AF188994_1 homeodomain-leucine zipper protein interfascicular fiberless 1
           [Arabidopsis thaliana]
 gi|9759333|dbj|BAB09842.1| Revoluta [Arabidopsis thaliana]
 gi|27413560|gb|AAO11835.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|110738992|dbj|BAF01416.1| REVOLUTA or interfascicular fiberless 1 [Arabidopsis thaliana]
 gi|332009984|gb|AED97367.1| homeobox-leucine zipper protein REVOLUTA [Arabidopsis thaliana]
          Length = 842

 Score = 1051 bits (2718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/837 (64%), Positives = 635/837 (75%), Gaps = 54/837 (6%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIREC IL+NIEPKQIKVWFQNRRCR+K
Sbjct: 23  SGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVWFQNRRCRDK 82

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCE 134
           QRKEASRLQ+VNRKL+AMNKLLMEENDRLQKQVSQLV ENGY +Q     T    D SCE
Sbjct: 83  QRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCENGYMKQQL---TTVVNDPSCE 139

Query: 135 SVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSV 193
           SVVT      TPQH  RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPDSV
Sbjct: 140 SVVT------TPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSV 193

Query: 194 GIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI-- 233
           GI AIS  C+GVAARACGLV LEP ++AEILKDRP                   G  I  
Sbjct: 194 GIFAISQRCNGVAARACGLVSLEPMKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIEL 253

Query: 234 ----LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLP 289
                YA TTLAPARDFW LRYT+ L++GS VVCERSL     GP       FVRAEML 
Sbjct: 254 VYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEMLS 313

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQE 349
           SGYLIRPC+GGGSIIHIVDH++LE WSVP+VLRPLYESS V+AQK T++ALR +RQ+AQE
Sbjct: 314 SGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALRYIRQLAQE 373

Query: 350 VTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD- 408
                V G GR+PA LR  SQRLSRGFN+AVNGF D+GW+ M  DG +D+ V +NS+   
Sbjct: 374 SNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIVAINSTKHL 433

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAA 468
             +  +LSF  G       VLCAKASMLLQNVPPA+L+RFLREHRSEWAD N+D YSAA 
Sbjct: 434 NNISNSLSFLGG-------VLCAKASMLLQNVPPAVLIRFLREHRSEWADFNVDAYSAAT 486

Query: 469 IKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQ 527
           +K G  + PG R   F GSQ+I+PL HTIEHEE +EV++LEG   + EDA M RD+ LLQ
Sbjct: 487 LKAGSFAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQ 546

Query: 528 LCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET-----SSPNRTLD 582
           +C+G+DENAVG C+ELIFAPI+  F DDAPL+PSGFR+IP+D+         ++ +RTLD
Sbjct: 547 ICTGIDENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLD 606

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           L S+LE+GP+   A+ N  ++S+  R ++TIAF+F FE+++QE+VA MA QYVRS+ISSV
Sbjct: 607 LTSSLEVGPSPENASGNSFSSSS-SRCILTIAFQFPFENNLQENVAGMACQYVRSVISSV 665

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS-ESILK 701
           QRVA+A+SPS IS   G +   G+PEA+TLA+WI  SY  +LG +LL   S GS +S+LK
Sbjct: 666 QRVAMAISPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSELLTIDSLGSDDSVLK 725

Query: 702 NLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFP 761
            LW H DA++CCSLK  PVF FANQAGLDMLETTLVALQDITLEKIFD+ GRKA+ ++F 
Sbjct: 726 LLWDHQDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAICSDFA 785

Query: 762 QIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE----TAHCICFMFINWSFV 814
           ++MQQGFACL  GIC+S+MGR VSYE+AVAWKV    E      HC+ F F+NWSFV
Sbjct: 786 KLMQQGFACLPSGICVSTMGRHVSYEQAVAWKVFAASEENNNNLHCLAFSFVNWSFV 842


>gi|89514841|gb|ABD75295.1| class III homeodomain-leucine zipper protein C3HDZ1 [Marchantia
           polymorpha]
          Length = 860

 Score = 1050 bits (2716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 523/861 (60%), Positives = 647/861 (75%), Gaps = 48/861 (5%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MA++ ++ ++    +GKYVRYT EQVEALER+Y+ECPKPSSIRRQQLI++CPIL+NIEPK
Sbjct: 1   MAVTKRESRSVMDASGKYVRYTNEQVEALERVYNECPKPSSIRRQQLIKDCPILANIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN Y RQH
Sbjct: 61  QIKVWFQNRRCREKQRKEATRLLSVNAKLTALNKLLMEENERLSKHTSQLAIENQYLRQH 120

Query: 121 TQS-------------TTLATKDTSCESVVTSG-QHHLTPQHPPRDASPAGLLSIAEETL 166
           T S               +AT DTS ESVVT G Q H TPQHPPRDASPAGLL+IAEETL
Sbjct: 121 TSSDRNLKPNRRLHEQAGMATPDTSSESVVTGGLQRHPTPQHPPRDASPAGLLAIAEETL 180

Query: 167 TEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKD 226
           TEFL+KATGTA++W+QMPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPT+VA++LKD
Sbjct: 181 TEFLAKATGTAIDWIQMPGMKPGPDSIGIVAISHGCAGVAARACGLVGLEPTKVADVLKD 240

Query: 227 RP------------------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVV 262
           RP                   G  +      +YA TTLAPARDF  LRYTS LEDG+LV+
Sbjct: 241 RPAWLRDCRRLDVLGAFPTGNGGTVELIYTQMYAPTTLAPARDFCTLRYTSFLEDGNLVI 300

Query: 263 CERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 322
           CERSL      PTMPPVQ FVRAEMLPSGYLIRPCEGGG IIHIVDHMDLEPWSVPEVLR
Sbjct: 301 CERSLSGAHGAPTMPPVQFFVRAEMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVLR 360

Query: 323 PLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNG 382
           PLYESS VLAQK T+ ALR LR++AQE+    V G  ++PA LRALSQRL+RGFNEAVNG
Sbjct: 361 PLYESSAVLAQKMTIGALRHLRRLAQEIPGEVVLGSDQQPAVLRALSQRLARGFNEAVNG 420

Query: 383 FTDEGWTVMGNDGMDDVTVLVNSSPD-KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVP 441
           F D+GWT + +DGMDDV+V+VN +P+ K  G   +  +   ++   +LCAKASMLLQNVP
Sbjct: 421 FADDGWTTLPSDGMDDVSVVVNPNPNSKQFGGGPNATDRLCSIGGGILCAKASMLLQNVP 480

Query: 442 PAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEF 501
           PA+L+RFLREHRSEWAD  ID  +AAA++        SR    G Q+ LPLAH +E EEF
Sbjct: 481 PALLIRFLREHRSEWADCEIDADAAAALRSTNYVGSESRGSLCGGQLPLPLAHAVEQEEF 540

Query: 502 MEVIKLEGVGHSPEDAIMPR-DMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLP 560
           +EV+KLEG   + +  ++ R D FLLQLCSG+DENAVG CA+L+FAP+D +  DD PLL 
Sbjct: 541 LEVVKLEGHSPTQDGGVLNRSDSFLLQLCSGVDENAVGACAQLVFAPVDVAVTDDVPLLA 600

Query: 561 SGFRIIPLDSG-KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAF 619
           SGFR+IPLDSG  +    +RTLDL S LE G +  R   +   ++  +RSV+TIAF+FAF
Sbjct: 601 SGFRVIPLDSGIVDGYGLSRTLDLTSTLE-GGSEARLVGDSGASACHLRSVLTIAFQFAF 659

Query: 620 ESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAG--LRTPLGTPEALTLARWIC 677
           E H ++ VA MARQYVR++++SVQRVA+AL+PS + S  G     P  TPEAL LAR + 
Sbjct: 660 EVHTRDSVAAMARQYVRTVVASVQRVAMALAPSRLGSHLGGTRHPPPATPEALVLARRVL 719

Query: 678 HSYRCYLGVDLL----KSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLE 733
            SYR Y+G++L     ++    SE++ K  W+H+DA++CC+ K+LP FTF N+AGL+MLE
Sbjct: 720 QSYRSYMGMELTRELERTDYSNSEALFKIFWNHSDAILCCACKSLPEFTFGNRAGLEMLE 779

Query: 734 TTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWK 793
           T+  ALQ++T EK  D++GRK  +++F Q+M QG+ACL  G+ +SSMGRP +Y++A+AWK
Sbjct: 780 TSSGALQELTWEKTLDENGRKPAYSDFTQVMTQGYACLPAGVRISSMGRPATYQQAIAWK 839

Query: 794 VLNEEETAHCICFMFINWSFV 814
           V++E++  HCI FMF NWSF+
Sbjct: 840 VVDEDDHTHCIAFMFTNWSFL 860


>gi|449456008|ref|XP_004145742.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           REVOLUTA-like [Cucumis sativus]
          Length = 840

 Score = 1048 bits (2711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 547/851 (64%), Positives = 630/851 (74%), Gaps = 48/851 (5%)

Query: 1   MAMSC---KDGKTGSL-----DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECP 52
           MAM+    ++  TGS+      +GKYVRYT EQVEALER+Y ECPKPSS+RRQQL+R+CP
Sbjct: 1   MAMAIAHHRESSTGSITRHLDSSGKYVRYTSEQVEALERVYAECPKPSSLRRQQLVRDCP 60

Query: 53  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 112
           ILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKL AMNKLLMEENDRLQKQVSQLV 
Sbjct: 61  ILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSQLVC 120

Query: 113 ENGYFRQHTQST-TLATKDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFL 170
           ENG+ RQ   +    AT D SC+SVVT      TPQ   RDA+ PAG  S     L  FL
Sbjct: 121 ENGFMRQQLHTVPAAATADASCDSVVT------TPQPSRRDANNPAGXFSKPIIDLF-FL 173

Query: 171 SKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-- 228
                T+  WVQMPGMKPGPDSVGI AIS  C GVAARACGLV LEP+++AEILKDRP  
Sbjct: 174 LTYKXTSCXWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPSKIAEILKDRPSW 233

Query: 229 ----------------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERS 266
                            G  I      +YA TTLAPARDFW LRYT  LE+GSLVVCERS
Sbjct: 234 FRDCRSLEVFTMFPAGNGGTIELVYTQVYAPTTLAPARDFWTLRYTITLENGSLVVCERS 293

Query: 267 LKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYE 326
           L     GP+      FVRAEMLPSGYLIRPCEGGGSIIHIVDH++LE W VPEVLRPLYE
Sbjct: 294 LSGSGAGPSEAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWHVPEVLRPLYE 353

Query: 327 SSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDE 386
           SS V+AQK T+AALR +RQ+AQE +   V G GR+PA LR  SQRLSRGFN+AVNGF D 
Sbjct: 354 SSKVVAQKMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDN 413

Query: 387 GWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILL 446
           GW+++  +G +DV + VNS+  K  G   + AN        VLCAKASMLLQNVPPA+L+
Sbjct: 414 GWSLINCEGAEDVVLTVNST--KNFGTTSNPANSL-TYPGGVLCAKASMLLQNVPPAVLV 470

Query: 447 RFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVI 505
           RFLREHRSEWAD NID YSAA +K    + PG R   F GSQ+I+PL HTIEHEE +EVI
Sbjct: 471 RFLREHRSEWADFNIDAYSAATLKANSYTYPGMRPTRFTGSQIIMPLGHTIEHEELLEVI 530

Query: 506 KLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRI 565
           +LEG     EDA + RD+ LLQ+CSG+DENAVG C+ELIFAPID  F DDAPLLPSGFRI
Sbjct: 531 RLEGHPMVQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLLPSGFRI 590

Query: 566 IPLDS-GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQ 624
           IPLDS   +     RTLDL S+LE+G +G   T   +++S   RSV+TIAF+F FES MQ
Sbjct: 591 IPLDSRTSDAKGSQRTLDLTSSLEVG-SGTSNTAGDASSSQSARSVLTIAFQFPFESSMQ 649

Query: 625 EHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYL 684
           ++VA MA QYVRS+ISSVQRVA+A+SPS      G +   G+PEALTLA WIC SY   L
Sbjct: 650 DNVANMAHQYVRSVISSVQRVAMAISPSGGGPALGPKLSPGSPEALTLAHWICKSYSLQL 709

Query: 685 GVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITL 744
           G +L+KS S   +S+LKNLW+H DA++CCSLK+LPVF FANQAGLDMLETTLVALQDITL
Sbjct: 710 GTELIKSDSLEGDSLLKNLWNHQDAILCCSLKSLPVFLFANQAGLDMLETTLVALQDITL 769

Query: 745 EKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLN-EEETAHC 803
           +KIFD+ GRKAL A+FP++MQQGFA L GGIC S+MGR VSYE+AVAWKVL  +E T HC
Sbjct: 770 DKIFDESGRKALCADFPKLMQQGFAYLPGGICASTMGRHVSYEQAVAWKVLEADETTVHC 829

Query: 804 ICFMFINWSFV 814
           + F FINWSFV
Sbjct: 830 LAFSFINWSFV 840


>gi|312282957|dbj|BAJ34344.1| unnamed protein product [Thellungiella halophila]
          Length = 844

 Score = 1048 bits (2709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 530/847 (62%), Positives = 640/847 (75%), Gaps = 53/847 (6%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           +D      D+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPIL NIEP+QIKVW
Sbjct: 13  RDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVW 72

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKE++RLQ VNRKL+AMNKLLMEENDRLQKQVS LVYENG+ +    + +
Sbjct: 73  FQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGFMKHRIHTAS 132

Query: 126 LATKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEW 180
             T D SCESVV SGQ       T QHP RDA+ PAGLLSIAEETL EFL KATGTAV+W
Sbjct: 133 GTTTDNSCESVVVSGQQRQQQNPTHQHPQRDANNPAGLLSIAEETLAEFLCKATGTAVDW 192

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQM GMKPGPDS+GIVA+S  CSG+AARACGLV LEP +V EILKDRP            
Sbjct: 193 VQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVVEILKDRPSWFRDCRCVETL 252

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I      +YA TTLA ARDFW LRY++ LEDGS VVCE+SL +   GP  
Sbjct: 253 SVIPTGNGGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCEKSLTSATGGPNG 312

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           P    FVRA+ML SG+LIRPC+GGGSIIHIVDH+DL+  SVPEVLRPLYESS +LAQK T
Sbjct: 313 PLSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMT 372

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           +AALR +RQ+AQE +       GR+PA LR  SQRL RGFN+AVNGF D+GW+ M +DG 
Sbjct: 373 VAALRHVRQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFADDGWSPMSSDGG 432

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGF-PAVSNAVLCAKASMLLQNVPPAILLRFLREHRSE 455
           +D+T+++NSS  K  G    + N F P+  + VLCAKASMLLQNVPP +L+RFLREHR+E
Sbjct: 433 EDITIMINSSSAKFAGSQ--YGNSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLREHRAE 490

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           WAD  +D YSAA+++  P ++P  R G F S QVILPLA T+EHEEF+EV++L G  +SP
Sbjct: 491 WADYGVDAYSAASLRATPFAVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLGGHAYSP 550

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET 574
           ED  + RDM+LLQLCSG+DEN VG CA+L+FAPID SFADDAPLLPSGFR+IPL+     
Sbjct: 551 EDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPLEQKTTP 610

Query: 575 S---SPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMA 631
           S   S NRT DLAS+L+    G+  T++  TNS   R V+TIAF+F F++H +++VATMA
Sbjct: 611 SDHVSANRTRDLASSLD----GSTKTDS-ETNS---RLVLTIAFQFTFDNHSRDNVATMA 662

Query: 632 RQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKS 691
           RQYVR+++ S+QRVALA++P   S Q  L T   +PEALTL RWI  SY  + G +LL +
Sbjct: 663 RQYVRNVVGSIQRVALAITPRPGSMQ--LPT---SPEALTLVRWISRSYSIHTGANLLGA 717

Query: 692 SSEG--SESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKI 747
            S+    +++LK LW+H DA++CCSLK  A PVFTFANQAGLDMLETTLVALQDI L+K 
Sbjct: 718 ESQACDGDTLLKQLWNHADAILCCSLKTNASPVFTFANQAGLDMLETTLVALQDIMLDKT 777

Query: 748 FDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFM 807
            +D GRKAL +EF +IMQQG+A L  GIC+SSMGRPVSYE+A  WKVL+++E+ HC+ F+
Sbjct: 778 LNDSGRKALCSEFAKIMQQGYANLPAGICVSSMGRPVSYEQATVWKVLDDDESNHCLAFI 837

Query: 808 FINWSFV 814
            +NWSFV
Sbjct: 838 LVNWSFV 844


>gi|90110436|gb|ABD90520.1| class III homeodomain-leucine zipper [Marchantia polymorpha]
          Length = 860

 Score = 1047 bits (2707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/861 (60%), Positives = 645/861 (74%), Gaps = 48/861 (5%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MA++ ++ ++    +GKYVRYT EQVEALER+Y+ECPKPSSIRRQQLI++CPIL+NIEPK
Sbjct: 1   MAVTKRESRSVMDASGKYVRYTNEQVEALERVYNECPKPSSIRRQQLIKDCPILANIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEA+RL +VN K TA+NKLLMEEN+RL K  SQL  EN Y RQH
Sbjct: 61  QIKVWFQNRRCREKQRKEATRLLSVNAKPTALNKLLMEENERLSKHTSQLAIENQYLRQH 120

Query: 121 TQS-------------TTLATKDTSCESVVTSG-QHHLTPQHPPRDASPAGLLSIAEETL 166
           T S               +AT DTS ESVVT G Q H TPQHPPRDASPAGLL+IAEETL
Sbjct: 121 TSSERNLKPSRRLHEQAGMATPDTSSESVVTGGLQRHPTPQHPPRDASPAGLLAIAEETL 180

Query: 167 TEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKD 226
           TEFL+KATGTA++W+QMPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPT+VA++LKD
Sbjct: 181 TEFLAKATGTAIDWIQMPGMKPGPDSIGIVAISHGCAGVAARACGLVGLEPTKVADVLKD 240

Query: 227 RP------------------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVV 262
           RP                   G  +      +YA TTLAPARDF  LRYTS LEDG+LV+
Sbjct: 241 RPAWLRDCRRLDVLGAFPTGNGGTVELIYTQMYAPTTLAPARDFCALRYTSFLEDGNLVI 300

Query: 263 CERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 322
           CERSL      PTMPPVQ FVRAEMLPSGYLIRPCEGGG IIHIVDHMDLEPWSVPEVLR
Sbjct: 301 CERSLSGAHGAPTMPPVQFFVRAEMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVLR 360

Query: 323 PLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNG 382
           PLYESS VLAQK TM ALR LR++AQE+    V G  ++PA LRALSQRL+RGFNEAVNG
Sbjct: 361 PLYESSAVLAQKMTMGALRHLRRLAQEIPGEVVLGSDQQPAVLRALSQRLARGFNEAVNG 420

Query: 383 FTDEGWTVMGNDGMDDVTVLVNSSPD-KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVP 441
           F D+GWT + +DGMDDV+V+VN +P+ K  G   +  +   ++   +LCAKASMLLQNVP
Sbjct: 421 FADDGWTTLPSDGMDDVSVVVNPNPNSKQFGGGPNATDRLCSIGGGILCAKASMLLQNVP 480

Query: 442 PAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEF 501
           PA+L+RFLREHRSEWAD  ID  +AAA++        SR    G Q+ LPLAH +E EEF
Sbjct: 481 PALLIRFLREHRSEWADCEIDADAAAALRSTNYVGSESRGSLCGGQLPLPLAHAVEQEEF 540

Query: 502 MEVIKLEGVGHSPEDAIMPR-DMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLP 560
           +EV+KLEG   + +  ++ R D FLLQLCSG+DENAVG CA+L+FAP+D +  DD PLL 
Sbjct: 541 LEVVKLEGHSPTQDGGVLNRSDSFLLQLCSGVDENAVGACAQLVFAPVDVAVTDDVPLLA 600

Query: 561 SGFRIIPLDSG-KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAF 619
           SGFR+IPLDSG  +    +RTLDL S LE G +  R   +   ++  +RSV+TIAF+FAF
Sbjct: 601 SGFRVIPLDSGIVDGYGLSRTLDLTSTLE-GGSEARLVGDSGASACHLRSVLTIAFQFAF 659

Query: 620 ESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAG--LRTPLGTPEALTLARWIC 677
           E +  + VA MARQYVR++++SVQRVA+AL+PS + S  G     P  TPEAL LAR + 
Sbjct: 660 EVYTGDSVAAMARQYVRTVVASVQRVAMALAPSRLGSHLGGTRHPPPATPEALVLARRVL 719

Query: 678 HSYRCYLGVDLL----KSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLE 733
            SYR Y+G++L     ++    SE++ K  W+H+DA++CC+ K+LP FTF N+AGL+MLE
Sbjct: 720 QSYRSYMGMELTRELERTDYSNSEALFKIFWNHSDAILCCACKSLPEFTFGNRAGLEMLE 779

Query: 734 TTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWK 793
           T+  ALQ++T EK  D++GRK  +++F Q+M QG+ACL  G+ +SSMGRP +Y++A+AWK
Sbjct: 780 TSSGALQELTWEKTLDENGRKTAYSDFTQVMTQGYACLPAGVRISSMGRPATYQQAIAWK 839

Query: 794 VLNEEETAHCICFMFINWSFV 814
           V++E++  HCI FMF NWSF+
Sbjct: 840 VVDEDDHTHCIAFMFTNWSFL 860


>gi|297851492|ref|XP_002893627.1| hypothetical protein ARALYDRAFT_473277 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339469|gb|EFH69886.1| hypothetical protein ARALYDRAFT_473277 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 840

 Score = 1046 bits (2705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/851 (61%), Positives = 636/851 (74%), Gaps = 53/851 (6%)

Query: 2   AMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQ 61
           +M  +D      D+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPIL NIEP+Q
Sbjct: 5   SMDDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQ 64

Query: 62  IKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHT 121
           IKVWFQNRRCREKQRKE++RLQ VNRKL+AMNKLLMEENDRLQKQVS LVYENG+ +   
Sbjct: 65  IKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVYENGFMKHRI 124

Query: 122 QSTTLATKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGT 176
            + +  T D SCESVV  GQ       T QHP RDA+ PA LLSIAEETL EFL KATGT
Sbjct: 125 HTASGTTTDNSCESVVVIGQQRQQQNPTHQHPQRDANNPANLLSIAEETLAEFLCKATGT 184

Query: 177 AVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------- 228
           AV+WVQM GMKPGPDS+GIVA+S  CSG+AARACGLV LEP +VAEILKDRP        
Sbjct: 185 AVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRPSWFRDCRC 244

Query: 229 ----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQN 272
                      G  I      +YA TTLA ARDFW LRY++ LEDGS VVCERSL +   
Sbjct: 245 VETLNVIPTGNGGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATG 304

Query: 273 GPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLA 332
           GP  P    FVRA+ML SG+LIRPC+GGGSIIHIVDH+DL+  SVPEVLRPLYESS +LA
Sbjct: 305 GPNGPLSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILA 364

Query: 333 QKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMG 392
           QK T+AALR +RQ+AQE +       GR+PA LR  SQRL RGFN+AVNGF D+GW+ M 
Sbjct: 365 QKMTVAALRHVRQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMS 424

Query: 393 NDGMDDVTVLVNSSPDKLMGLNLSFANGF-PAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           +DG +D+T+++NSS  K  G    + + F P+  + VLCAKASMLLQNVPP +L+RFLRE
Sbjct: 425 SDGAEDITIMINSSSAKFAGSQ--YGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLRE 482

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGV 510
           HR+EWAD  +D YSAA+++  P ++P  R G F S QVILPLA T+EHEEF+EV++L G 
Sbjct: 483 HRAEWADYGVDAYSAASLRATPFTVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLGGH 542

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
            +SPED  + RDM+LLQLCSG+DEN VG CA+L+FAPID SFADDAPLLPSGFR+IPLD 
Sbjct: 543 AYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPLDQ 602

Query: 571 G---KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHV 627
                +  S +RT DLAS+L+     +  TN+        R V+TIAF+F F++H +++V
Sbjct: 603 KTNPNDHQSASRTRDLASSLDGSTKTDSETNS--------RLVLTIAFQFTFDNHSRDNV 654

Query: 628 ATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVD 687
           ATMARQYVR+++ S+QRVALA++P   S Q  L T   +PEALTL RWI  SY  + G D
Sbjct: 655 ATMARQYVRNVVGSIQRVALAITPRPGSMQ--LPT---SPEALTLVRWITRSYSIHTGAD 709

Query: 688 LLKSSSE--GSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDIT 743
           L  + S+  G +++LK LW+H+DA++CCSLK    PVFTFANQAGLDMLETTLVALQDI 
Sbjct: 710 LFGADSQSCGGDTLLKQLWNHSDAILCCSLKTNGSPVFTFANQAGLDMLETTLVALQDIM 769

Query: 744 LEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHC 803
           L+K  DD GRKAL +EF +IMQQG+A L  GIC+SSMGRPVSYE+A  WKV+++ E+ HC
Sbjct: 770 LDKTLDDSGRKALCSEFAKIMQQGYANLPAGICVSSMGRPVSYEQATVWKVVDDNESNHC 829

Query: 804 ICFMFINWSFV 814
           + F+ +NWSFV
Sbjct: 830 LAFILVNWSFV 840


>gi|15220758|ref|NP_174337.1| homeobox-leucine zipper protein ATHB-9 [Arabidopsis thaliana]
 gi|75096987|sp|O04292.1|ATBH9_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-9; AltName:
           Full=HD-ZIP protein ATHB-9; AltName: Full=Homeodomain
           transcription factor ATHB-9; AltName: Full=Protein
           PHAVOLUTA
 gi|2145358|emb|CAA71854.1| HD-Zip protein [Arabidopsis thaliana]
 gi|20069421|emb|CAD29544.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|110741482|dbj|BAE98697.1| HD-Zip protein [Arabidopsis thaliana]
 gi|332193111|gb|AEE31232.1| homeobox-leucine zipper protein ATHB-9 [Arabidopsis thaliana]
          Length = 841

 Score = 1043 bits (2698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/851 (61%), Positives = 635/851 (74%), Gaps = 53/851 (6%)

Query: 2   AMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQ 61
           +M  +D      D+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPIL NIEP+Q
Sbjct: 6   SMDDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQ 65

Query: 62  IKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHT 121
           IKVWFQNRRCREKQRKE++RLQ VNRKL+AMNKLLMEENDRLQKQVS LVYENG+ +   
Sbjct: 66  IKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVYENGFMKHRI 125

Query: 122 QSTTLATKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGT 176
            + +  T D SCESVV SGQ       T QHP RD + PA LLSIAEETL EFL KATGT
Sbjct: 126 HTASGTTTDNSCESVVVSGQQRQQQNPTHQHPQRDVNNPANLLSIAEETLAEFLCKATGT 185

Query: 177 AVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------- 228
           AV+WVQM GMKPGPDS+GIVA+S  CSG+AARACGLV LEP +VAEILKDRP        
Sbjct: 186 AVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRPSWFRDCRC 245

Query: 229 ----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQN 272
                      G  I      +YA TTLA ARDFW LRY++ LEDGS VVCERSL +   
Sbjct: 246 VETLNVIPTGNGGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATG 305

Query: 273 GPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLA 332
           GP  P    FVRA+ML SG+LIRPC+GGGSIIHIVDH+DL+  SVPEVLRPLYESS +LA
Sbjct: 306 GPNGPLSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILA 365

Query: 333 QKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMG 392
           QK T+AALR +RQ+AQE +       GR+PA LR  SQRL RGFN+AVNGF D+GW+ M 
Sbjct: 366 QKMTVAALRHVRQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMS 425

Query: 393 NDGMDDVTVLVNSSPDKLMGLNLSFANGF-PAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           +DG +D+T+++NSS  K  G    + + F P+  + VLCAKASMLLQNVPP +L+RFLRE
Sbjct: 426 SDGGEDITIMINSSSAKFAGSQ--YGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLRE 483

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGV 510
           HR+EWAD  +D YSAA+++  P ++P  R G F S QVILPLA T+EHEEF+EV++L G 
Sbjct: 484 HRAEWADYGVDAYSAASLRATPYAVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLGGH 543

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
            +SPED  + RDM+LLQLCSG+DEN VG CA+L+FAPID SFADDAPLLPSGFR+IPLD 
Sbjct: 544 AYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPLDQ 603

Query: 571 G---KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHV 627
                +  S +RT DLAS+L+     +  TN+        R V+TIAF+F F++H +++V
Sbjct: 604 KTNPNDHQSASRTRDLASSLDGSTKTDSETNS--------RLVLTIAFQFTFDNHSRDNV 655

Query: 628 ATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVD 687
           ATMARQYVR+++ S+QRVALA++P   S Q  L T   +PEALTL RWI  SY  + G D
Sbjct: 656 ATMARQYVRNVVGSIQRVALAITPRPGSMQ--LPT---SPEALTLVRWITRSYSIHTGAD 710

Query: 688 LLKSSSE--GSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDIT 743
           L  + S+  G +++LK LW H+DA++CCSLK  A PVFTFANQAGLDMLETTLVALQDI 
Sbjct: 711 LFGADSQSCGGDTLLKQLWDHSDAILCCSLKTNASPVFTFANQAGLDMLETTLVALQDIM 770

Query: 744 LEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHC 803
           L+K  DD GR+AL +EF +IMQQG+A L  GIC+SSMGRPVSYE+A  WKV+++ E+ HC
Sbjct: 771 LDKTLDDSGRRALCSEFAKIMQQGYANLPAGICVSSMGRPVSYEQATVWKVVDDNESNHC 830

Query: 804 ICFMFINWSFV 814
           + F  ++WSFV
Sbjct: 831 LAFTLVSWSFV 841


>gi|6634772|gb|AAF19752.1|AC009917_11 Strong similarity to gb|Y10922 HD-Zip protein from Arabidopsis
           thaliana, containing START PF|01852, bZIP transcription
           factor PF|00170, and homeobox PF|00046 domains. ESTs
           gb|F20019, gb|Z46707, gb|Z46706, gb|F20018 come from
           this gene [Arabidopsis thaliana]
          Length = 840

 Score = 1043 bits (2697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/851 (61%), Positives = 635/851 (74%), Gaps = 53/851 (6%)

Query: 2   AMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQ 61
           +M  +D      D+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPIL NIEP+Q
Sbjct: 5   SMDDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQ 64

Query: 62  IKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHT 121
           IKVWFQNRRCREKQRKE++RLQ VNRKL+AMNKLLMEENDRLQKQVS LVYENG+ +   
Sbjct: 65  IKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVYENGFMKHRI 124

Query: 122 QSTTLATKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGT 176
            + +  T D SCESVV SGQ       T QHP RD + PA LLSIAEETL EFL KATGT
Sbjct: 125 HTASGTTTDNSCESVVVSGQQRQQQNPTHQHPQRDVNNPANLLSIAEETLAEFLCKATGT 184

Query: 177 AVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------- 228
           AV+WVQM GMKPGPDS+GIVA+S  CSG+AARACGLV LEP +VAEILKDRP        
Sbjct: 185 AVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRPSWFRDCRC 244

Query: 229 ----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQN 272
                      G  I      +YA TTLA ARDFW LRY++ LEDGS VVCERSL +   
Sbjct: 245 VETLNVIPTGNGGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATG 304

Query: 273 GPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLA 332
           GP  P    FVRA+ML SG+LIRPC+GGGSIIHIVDH+DL+  SVPEVLRPLYESS +LA
Sbjct: 305 GPNGPLSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILA 364

Query: 333 QKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMG 392
           QK T+AALR +RQ+AQE +       GR+PA LR  SQRL RGFN+AVNGF D+GW+ M 
Sbjct: 365 QKMTVAALRHVRQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMS 424

Query: 393 NDGMDDVTVLVNSSPDKLMGLNLSFANGF-PAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           +DG +D+T+++NSS  K  G    + + F P+  + VLCAKASMLLQNVPP +L+RFLRE
Sbjct: 425 SDGGEDITIMINSSSAKFAGSQ--YGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLRE 482

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGV 510
           HR+EWAD  +D YSAA+++  P ++P  R G F S QVILPLA T+EHEEF+EV++L G 
Sbjct: 483 HRAEWADYGVDAYSAASLRATPYAVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLGGH 542

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
            +SPED  + RDM+LLQLCSG+DEN VG CA+L+FAPID SFADDAPLLPSGFR+IPLD 
Sbjct: 543 AYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPLDQ 602

Query: 571 G---KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHV 627
                +  S +RT DLAS+L+     +  TN+        R V+TIAF+F F++H +++V
Sbjct: 603 KTNPNDHQSASRTRDLASSLDGSTKTDSETNS--------RLVLTIAFQFTFDNHSRDNV 654

Query: 628 ATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVD 687
           ATMARQYVR+++ S+QRVALA++P   S Q  L T   +PEALTL RWI  SY  + G D
Sbjct: 655 ATMARQYVRNVVGSIQRVALAITPRPGSMQ--LPT---SPEALTLVRWITRSYSIHTGAD 709

Query: 688 LLKSSSE--GSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDIT 743
           L  + S+  G +++LK LW H+DA++CCSLK  A PVFTFANQAGLDMLETTLVALQDI 
Sbjct: 710 LFGADSQSCGGDTLLKQLWDHSDAILCCSLKTNASPVFTFANQAGLDMLETTLVALQDIM 769

Query: 744 LEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHC 803
           L+K  DD GR+AL +EF +IMQQG+A L  GIC+SSMGRPVSYE+A  WKV+++ E+ HC
Sbjct: 770 LDKTLDDSGRRALCSEFAKIMQQGYANLPAGICVSSMGRPVSYEQATVWKVVDDNESNHC 829

Query: 804 ICFMFINWSFV 814
           + F  ++WSFV
Sbjct: 830 LAFTLVSWSFV 840


>gi|89514843|gb|ABD75296.1| class III homeodomain-leucine zipper protein C3HDZ1 [Phaeoceros
           carolinianus]
          Length = 861

 Score = 1042 bits (2695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/856 (61%), Positives = 646/856 (75%), Gaps = 49/856 (5%)

Query: 6   KDGKTGSLDN-GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 64
           KD ++  +DN GKYVRYT EQVEALER+Y+ECPKPSSIRRQQLI++CPIL+NIE KQIKV
Sbjct: 7   KDSRSSPMDNTGKYVRYTNEQVEALERVYNECPKPSSIRRQQLIKDCPILANIEAKQIKV 66

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFR------ 118
           WFQNRRCREKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN Y R      
Sbjct: 67  WFQNRRCREKQRKEATRLLSVNAKLTALNKLLMEENERLSKHTSQLAIENQYLRQQQQQL 126

Query: 119 -----------QHTQSTTLATKDTSCESVVTSG-QHHLTPQHPPRDASPAGLLSIAEETL 166
                      +  +   + T DTS ES VT G Q H TPQHPPRDASPAGLLSIAEETL
Sbjct: 127 VKSDCIGKPSRRSQEQLAMTTTDTSSESAVTGGLQQHPTPQHPPRDASPAGLLSIAEETL 186

Query: 167 TEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKD 226
           TEFL+KATGTAV+W+QMPGMKPGP+S+GIVAISHGC+G+AARACGLVGLEPT+VAEILKD
Sbjct: 187 TEFLAKATGTAVDWIQMPGMKPGPESIGIVAISHGCAGIAARACGLVGLEPTKVAEILKD 246

Query: 227 RP------------------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVV 262
           RP                   G  +      +YA TTLAP RDF  LRYT+ LEDG+LV+
Sbjct: 247 RPSWLRDCRRLDILGAFPTGNGGTVELIYTQMYAPTTLAPPRDFCTLRYTTFLEDGNLVI 306

Query: 263 CERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 322
           CERSL     GPTMPPVQ+FVRAEMLPSGYLIRPC+GGGSIIHIVDH+DLEPWSVPEVLR
Sbjct: 307 CERSLSGAHGGPTMPPVQYFVRAEMLPSGYLIRPCDGGGSIIHIVDHVDLEPWSVPEVLR 366

Query: 323 PLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNG 382
           PLYESS VLAQKTT+ ALR LRQMA E       G G++PA LRALSQR++RGFNEAVNG
Sbjct: 367 PLYESSAVLAQKTTIGALRHLRQMAVESAIELPIGNGQQPAVLRALSQRIARGFNEAVNG 426

Query: 383 FTDEGWTVMGNDGMDDVTVLVNSSPD-KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVP 441
           F+D+GW  +  DGMDDV+V  NSSP  K +G   +  +   ++   +LCAKASMLLQNVP
Sbjct: 427 FSDDGWNTIVTDGMDDVSVAFNSSPHCKQLGAQATSTDRLCSLGGGILCAKASMLLQNVP 486

Query: 442 PAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEF 501
           PA+L+RFLREHRSEWAD +ID  +AAA+K       G R      Q+ +PLAH +E EEF
Sbjct: 487 PALLIRFLREHRSEWADCDIDADAAAALKTSTYGASG-RGSLCSGQLPMPLAHAVEQEEF 545

Query: 502 MEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPS 561
           +EV+KLEG G + +  ++PR+ FLLQLCSG+DENAVG CA+L+FAP+DA+ +DD PLLPS
Sbjct: 546 LEVVKLEGHG-AHDGTVLPRETFLLQLCSGIDENAVGACAQLVFAPVDAAVSDDVPLLPS 604

Query: 562 GFRIIPLDSG--KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAF 619
           GFR+IPLDSG        +RTLDLAS LE G   +R   +  T+S  +RSV+TIAF+F++
Sbjct: 605 GFRVIPLDSGLIDGYGGLSRTLDLASTLEGGSESSRFVGDSGTSSCHLRSVLTIAFQFSY 664

Query: 620 ESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHS 679
           E H ++ VA MARQYVR++++SVQRVA+AL+P+ + SQ  LR   GTPEAL LAR I  S
Sbjct: 665 EIHTRDAVAAMARQYVRTVVASVQRVAMALAPARVGSQLALRQSPGTPEALLLARRILQS 724

Query: 680 YRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVAL 739
           YR  LG+DL+++ +  ++++ K  W H DA++CCS K LP ++FAN++GL+MLE T   L
Sbjct: 725 YRVNLGMDLVRTETGSTDALFKAFWLHGDAIVCCSWKTLPEYSFANRSGLEMLEITSGGL 784

Query: 740 QDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKV-LNEE 798
           QD++ EK  D++ RK ++A+F Q+MQQG+A L GG+ LSSMGRP +YERAVAWKV L+++
Sbjct: 785 QDVSWEKTLDENSRKNVYADFNQVMQQGYAYLPGGVRLSSMGRPATYERAVAWKVILDDD 844

Query: 799 ETAHCICFMFINWSFV 814
           E+  C+ FMF+NWSF+
Sbjct: 845 ESTPCVAFMFVNWSFL 860


>gi|226531570|ref|NP_001146215.1| uncharacterized protein LOC100279785 [Zea mays]
 gi|219886211|gb|ACL53480.1| unknown [Zea mays]
 gi|414868944|tpg|DAA47501.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 854

 Score = 1035 bits (2677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/836 (60%), Positives = 635/836 (75%), Gaps = 34/836 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           LD GKYVRYT EQV+ALE  Y ECPKPSS+RRQQLIR+C +L+N+EP+QIKVWFQNRRCR
Sbjct: 19  LDAGKYVRYTAEQVDALELAYGECPKPSSLRRQQLIRDCAVLTNVEPRQIKVWFQNRRCR 78

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQR+E+SRLQ VNRKL AMNKLLMEENDRLQKQVS+LV++NGY +    S ++AT DTS
Sbjct: 79  EKQRRESSRLQTVNRKLGAMNKLLMEENDRLQKQVSRLVFDNGYMKNRLHSPSVATTDTS 138

Query: 133 CESVVTSGQHHLTPQ----HPP-RDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 186
           CESVVTSGQH         HPP RDA+ PAGLL+IAEETL EF+SKATGTAV WVQM GM
Sbjct: 139 CESVVTSGQHKQQQNPAVLHPPQRDANNPAGLLAIAEETLAEFMSKATGTAVNWVQMVGM 198

Query: 187 KPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR----------------PRG 230
           KPGPDSVGI+A+SH CSGVAARACGLV LEPT+VAEILKDR                P G
Sbjct: 199 KPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRASWYRDCRRVDILHVIPTG 258

Query: 231 SA--------ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHF 282
           +           YALTTLA  RDFW LRYTS L+DGSLV+CERSL +   GP+ P    F
Sbjct: 259 NGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICERSLTHSTGGPSGPKTPDF 318

Query: 283 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ 342
           +RAE+LPSGYLIRPC+GGGS+I+IVDH+DL   SVPEVLRPLYES  +LAQK T AALR 
Sbjct: 319 IRAEVLPSGYLIRPCDGGGSMIYIVDHVDLNACSVPEVLRPLYESPKILAQKMTAAALRH 378

Query: 343 LRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW-TVMGNDGMDDVTV 401
           +RQ+A E +  +  G GR+PA LR  SQRLSRGFN+AV+GF D+GW +++ +DG +D+++
Sbjct: 379 IRQIAHESSGETPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPDDGWSSLLSSDGAEDISI 438

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNI 461
            +NSSP+KL+G ++S +  F A+   ++CAKASMLLQNVPPA+L+RFLREHRSEWAD  +
Sbjct: 439 TINSSPNKLIGSDVSPSPFFSAMGGGIMCAKASMLLQNVPPALLVRFLREHRSEWADPGV 498

Query: 462 DVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
           D YSAA+++  P ++PG R G F G+QVILPLA T+EHEE +EVI+L+G G S ++ +M 
Sbjct: 499 DAYSAASLRANPYNVPGLRAGGFMGNQVILPLARTVEHEECLEVIRLQGHGFSHDEVLMS 558

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRT 580
            DMFLLQLCSG+DE+A G CA+L+FAPID SFADDAPLLPSGFR+IPLD+  +  S  RT
Sbjct: 559 PDMFLLQLCSGIDEDAPGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDVPSATRT 618

Query: 581 LDLASALEIGPAGNR-ATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSII 639
           LDLASALE+G  G   A ++  + +   RSV+TIAF+F+FE+H++E VA MARQYVR+++
Sbjct: 619 LDLASALEVGSGGGLCALSDSGSGTRSTRSVLTIAFQFSFENHLRESVAAMARQYVRAVM 678

Query: 640 SSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE-GSES 698
           + VQRVA+A+SPS +     L+ P G+PEAL LA WI  SYR + G ++  S +E  + S
Sbjct: 679 AIVQRVAMAISPSRLGPHVELKHPPGSPEALALASWIGRSYRAHTGTEIRWSDTEDAAGS 738

Query: 699 ILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFA 758
            L   W H+DA++CCSLK      FAN AG D+LETT+  +QD+ LE + DD G+KAL A
Sbjct: 739 PLTLFWKHSDAIICCSLKPAFTLKFANSAGFDILETTVANVQDLQLEAVLDDGGQKALVA 798

Query: 759 EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           + P+IM QG A L GG+C SSMGR  SYE+AVAWKV+ ++    C+  MF+NW+F+
Sbjct: 799 QLPKIMLQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAPQCLALMFVNWTFI 854


>gi|206572101|gb|ACI13683.1| putative PHV HD-ZIPIII [Malus x domestica]
          Length = 783

 Score = 1025 bits (2651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/785 (65%), Positives = 608/785 (77%), Gaps = 34/785 (4%)

Query: 62  IKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHT 121
           IKVWFQNRRCREKQRKE+SRLQ VNRKLTAMNKLLMEENDRLQKQVS LVYENG+ +Q  
Sbjct: 1   IKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGFMKQQL 60

Query: 122 QSTTLATKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGT 176
            + +  T D SCESVV SGQH      TPQHP RDA+ PAGLL+IAEETL EFLSKATGT
Sbjct: 61  HTASGTTTDNSCESVVMSGQHQQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGT 120

Query: 177 AVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR--------- 227
           AV+WVQM GMKPGPDS+GIVA+S  CSGVAARACGLV LEPT+VAEILKDR         
Sbjct: 121 AVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRKSWFRDCRC 180

Query: 228 -------PRGSA--------ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQN 272
                  P G+           YA TTLA ARDFW LRYT+ LEDGSLVVCERSL +   
Sbjct: 181 LEVLSLIPAGNGGTIELVYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVVCERSLTSSTG 240

Query: 273 GPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLA 332
           GP  P    FVRAEMLPSGYLIRPCEGGGSII+IVDH+DL+ WSVPEVLR LYESS +LA
Sbjct: 241 GPPGPTSASFVRAEMLPSGYLIRPCEGGGSIINIVDHVDLDAWSVPEVLRSLYESSKILA 300

Query: 333 QKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMG 392
           QKTT++ALR +RQ+AQE +    +G GR+PA LR   QRL  GFN+AVNGF D+GWT+MG
Sbjct: 301 QKTTISALRHIRQIAQESSGEIQHGGGRQPAVLRTFCQRLCSGFNDAVNGFADDGWTLMG 360

Query: 393 NDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH 452
           +DG++DVT+ +NSSP K++G   +  + FP     VLCAKASMLLQ+VPPA+L+RFLREH
Sbjct: 361 SDGVEDVTIAINSSP-KVLGSQYN-TSIFPPFGGGVLCAKASMLLQSVPPALLVRFLREH 418

Query: 453 RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGVG 511
           R+EWAD  +D YSAA +K  P ++P +R G F S Q ILPLA T+EHEEF+EV++LEG  
Sbjct: 419 RAEWADYGVDAYSAACLKASPYAVPLARGGGFPSTQNILPLAQTVEHEEFLEVVRLEGPA 478

Query: 512 HSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSG 571
            SPED  + RDM+LLQLCSG+DENAVG CA+L+FAPID SFADDAPLLPSGF +IPLD  
Sbjct: 479 FSPEDVALTRDMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAPLLPSGFHVIPLDPK 538

Query: 572 KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMA 631
            +  +  RTLDLAS LE+G +G RA N+   NS   RSV+TIAF+F FE+H++++VA MA
Sbjct: 539 ADGPTATRTLDLASTLEVGTSGARAINDADGNSYNRRSVLTIAFQFTFENHLRDNVAAMA 598

Query: 632 RQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKS 691
           RQYVRS++SSVQRVA+A++PS +SSQ G +   G PEA TLARWI  S+R + G +L + 
Sbjct: 599 RQYVRSVVSSVQRVAMAIAPSPLSSQIGPKPLPGCPEAHTLARWIFRSFRIHTGGELFRV 658

Query: 692 SSEGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFD 749
               S++ILK LW H+DA+MCCS+K    PVFTFANQAGLDMLETTLVALQDI L+KI D
Sbjct: 659 DISSSDAILKQLWRHSDAIMCCSVKTNTSPVFTFANQAGLDMLETTLVALQDIMLDKILD 718

Query: 750 DHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFI 809
           + GRK L +EF +IMQQGFA L  GIC SSMGRPVSYE+AVAWKV+N++++ HC+  MF+
Sbjct: 719 EAGRKFLCSEFSKIMQQGFAYLPAGICASSMGRPVSYEQAVAWKVVNDDDSNHCLALMFM 778

Query: 810 NWSFV 814
           NWSF+
Sbjct: 779 NWSFM 783


>gi|357453943|ref|XP_003597252.1| Homeobox leucine-zipper protein [Medicago truncatula]
 gi|355486300|gb|AES67503.1| Homeobox leucine-zipper protein [Medicago truncatula]
          Length = 839

 Score = 1021 bits (2641), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/836 (61%), Positives = 623/836 (74%), Gaps = 53/836 (6%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQ+EALE++Y ECPKPSS+RRQQLIRECP+L+NIEPKQIKVWFQNRRCREK
Sbjct: 21  SGKYVRYTAEQIEALEKVYVECPKPSSLRRQQLIRECPVLANIEPKQIKVWFQNRRCREK 80

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA--TKDTS 132
           QRKEAS+LQ+VNRKL+AMNKLLMEEN+RLQKQVSQLV ENG+ RQ    T  A     + 
Sbjct: 81  QRKEASQLQSVNRKLSAMNKLLMEENERLQKQVSQLVNENGFMRQQLHPTPAAPNADGSG 140

Query: 133 CESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
            +S   +      P +  RDA SPAG LSIAEETLTEFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 141 VDSAAAA------PMNSLRDANSPAGFLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPD 194

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------RGSAIL----------- 234
           SVGI AIS G +GVAARACGLV LEPT++ EILKDRP      R S +            
Sbjct: 195 SVGIFAISQGGNGVAARACGLVSLEPTKIVEILKDRPTWYRDCRSSEVFTMFPAGNGGTI 254

Query: 235 -------YALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                  YA  TLA ARDFW LRYT+ LE+GS+VVCERSL     GP       F RAEM
Sbjct: 255 ELVYTQTYAPMTLASARDFWTLRYTTNLENGSVVVCERSLSGTGAGPNAAAASQFERAEM 314

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYLIRPCEGGGSIIHIVDH++L+ WSVPEVLRP+YESS ++AQ+ T+AALR +RQ+A
Sbjct: 315 LPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPIYESSQMVAQRLTIAALRYIRQVA 374

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V   GR+PA LR  SQRLSRGFN+AVNGF D GW+V+  DG + VT+ VNS  
Sbjct: 375 QETSGDVVYSMGRQPAVLRTFSQRLSRGFNDAVNGFNDNGWSVLNCDGAEGVTISVNSIK 434

Query: 408 DKLMGLNLSFANGFPAVS----NAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
                 NLS  +  PA S      ++CAKASMLLQN  PA+L+RFLREHRSEWAD ++D 
Sbjct: 435 ------NLSGTSN-PASSLSLLGGIVCAKASMLLQNTTPAVLVRFLREHRSEWADFSVDA 487

Query: 464 YSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           +SAA++K G    PG R   F G+Q I+PL HTIEHEE +E+I+LEG+    +D+ + RD
Sbjct: 488 FSAASLKAGSYGYPGMRSTKFTGNQAIMPLGHTIEHEEMLEIIRLEGLAQ--DDSFVSRD 545

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS----GKETSSPN 578
           + LLQLC+G+DENAVG C+ELIFAPID  F +DAPL+PSGFRI+ L+S     K T++ N
Sbjct: 546 VHLLQLCTGIDENAVGACSELIFAPIDDMFPEDAPLVPSGFRIVLLNSQPGDTKNTTTAN 605

Query: 579 RTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSI 638
           RTLDL S LE+ PA   A  + S  +   R V+T+AF+F FES +Q++VA MARQYVR +
Sbjct: 606 RTLDLTSGLEVSPATAHANGDASCPNN--RCVLTVAFQFPFESGLQDNVAAMARQYVRRV 663

Query: 639 ISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSES 698
           +S+VQ VA A+SPS++++  G +   GTPEALTLA+WIC SY  +LG  LL+S S   + 
Sbjct: 664 VSAVQAVATAISPSSVNTSGGAKLSPGTPEALTLAQWICQSYSHHLGAQLLRSDSLIGDM 723

Query: 699 ILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFA 758
           +LK+LWHH DA++CCSLK +PVF FANQAGLDMLETTLVALQDITL+KIFD+  RK L A
Sbjct: 724 LLKHLWHHPDAILCCSLKQVPVFIFANQAGLDMLETTLVALQDITLDKIFDESARKNLIA 783

Query: 759 EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            F ++MQQGFAC+  GIC+S+MGR  SY++AVAWKV  E+ + HC+ F FINWSF+
Sbjct: 784 YFAKLMQQGFACMPAGICMSTMGRHASYDQAVAWKVHAEDNSVHCLAFSFINWSFI 839


>gi|357448489|ref|XP_003594520.1| Homeobox-leucine zipper protein ATHB-14 [Medicago truncatula]
 gi|355483568|gb|AES64771.1| Homeobox-leucine zipper protein ATHB-14 [Medicago truncatula]
          Length = 823

 Score = 1007 bits (2604), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/845 (60%), Positives = 627/845 (74%), Gaps = 73/845 (8%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNR   
Sbjct: 9   MDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNR--- 65

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ--HTQSTTLATK- 129
                            + ++ L++     + KQVS LVYENGY +Q  HT S + AT  
Sbjct: 66  -----------------SFLHLLVIV----VTKQVSHLVYENGYMKQQIHTVSASAATTT 104

Query: 130 DTSCESVVTSGQHHLT--PQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 186
           D SC+SVV SGQ+      Q P RDA+ PAGLL++AEETL EFLSKATGTAV+WVQM GM
Sbjct: 105 DNSCDSVVMSGQNQQQNPTQRPQRDANNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGM 164

Query: 187 KPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR----------------PRG 230
           KPGP+S+GIVA+S   SG+AARACGLV LEPT+VAEILKDR                P G
Sbjct: 165 KPGPESIGIVAVSRNSSGIAARACGLVSLEPTKVAEILKDRLSWYRDCRCVDVLSIVPTG 224

Query: 231 SA---------ILYALTT--------LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNG 273
                      +L+  T         L  +RDFW LRYT+ LEDGSLV+CERSL     G
Sbjct: 225 GGGTIELMYMQVLFYSTKELTMPFLFLLTSRDFWTLRYTTSLEDGSLVICERSLNASTGG 284

Query: 274 PTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQ 333
           PT P   +FVRAEMLPSG+LIRPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYESS +LAQ
Sbjct: 285 PTGPSPSNFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQ 344

Query: 334 KTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGN 393
           K T+AAL+ ++Q+AQE +     G GR+PA LR  SQRL RGFN+AVNGF D+GW+++GN
Sbjct: 345 KLTIAALQHIKQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLLGN 404

Query: 394 DGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHR 453
           DG++DVT+ VNSSP+K +G N  +++ FP     VLCAKASMLLQNVPPA+L+RFLREHR
Sbjct: 405 DGVEDVTIAVNSSPNKFLGSN--YSSMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHR 462

Query: 454 SEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGH 512
           SEWAD  +D YSA  +K  P ++P  R G F  SQVILPLA TIEHEEF+EV+++EG   
Sbjct: 463 SEWADYGVDAYSATCLKSSPYAVPCPRPGGFPSSQVILPLAPTIEHEEFLEVVRIEGHAF 522

Query: 513 SPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGK 572
           SPED  + RDM+LLQLCSG+DEN+VG CA+L+FAPID SFADDA LLPSGFR+IPLD   
Sbjct: 523 SPEDVALARDMYLLQLCSGIDENSVGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKS 582

Query: 573 ETSSPNRTLD-LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMA 631
           +  + +RTLD L  +    P+G  A     +N   +RSV+TIAF+F FE+H++++VA+MA
Sbjct: 583 DGPTTSRTLDLLEGSRNARPSGEGA----GSNGYNLRSVLTIAFQFTFENHLRDNVASMA 638

Query: 632 RQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKS 691
           RQYVRS+++SVQRVA+A++PS   +Q G ++  G+PEA  LARWI  SYR + G +L + 
Sbjct: 639 RQYVRSVVASVQRVAMAIAPSRPGTQLGPKSLPGSPEAHALARWISRSYRMHTGAELFRV 698

Query: 692 SSEGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFD 749
            S  S++ILK LWHH+DA+MCCS+K  A P+FTF+NQAGLDMLETTLVALQDI L+K+ D
Sbjct: 699 ESAASDAILKQLWHHSDAIMCCSVKTNASPIFTFSNQAGLDMLETTLVALQDIMLDKVLD 758

Query: 750 DHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFI 809
           + GRK L +EF +IMQQG+A L GGIC+SSM RPVSYE+A+AWKVLN+++  HC+ FMFI
Sbjct: 759 EAGRKILCSEFSKIMQQGYASLPGGICVSSMNRPVSYEQAIAWKVLNDDDANHCLAFMFI 818

Query: 810 NWSFV 814
           NWSFV
Sbjct: 819 NWSFV 823


>gi|125532383|gb|EAY78948.1| hypothetical protein OsI_34053 [Oryza sativa Indica Group]
          Length = 799

 Score =  997 bits (2577), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/828 (60%), Positives = 617/828 (74%), Gaps = 55/828 (6%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D+GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNRRCR
Sbjct: 1   MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCR 60

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           +KQRKEASRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN Y +Q  Q+ +L   DTS
Sbjct: 61  DKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLG-NDTS 119

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CES VT      TPQ+P RDAS P+GLL+IAEETLTEFLSKATGTAV+WV MPGMK    
Sbjct: 120 CESNVT------TPQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMK---- 169

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
                        V  +           + EILKDRP                   G  I
Sbjct: 170 -------------VDCQLLRFTLPASNDIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTI 216

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 +YA TTL PARDFW LRYT+ ++DGSLVVCERSL     GP+    Q FVRAEM
Sbjct: 217 ELVYMQMYAPTTLVPARDFWTLRYTTTMDDGSLVVCERSLSGSGGGPSTASAQQFVRAEM 276

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T AALR +RQ+A
Sbjct: 277 LPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIA 336

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV +  N+  
Sbjct: 337 QETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNAK- 395

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
            K+   + S AN F      V+CAKASMLLQ+VPPA+L+RFLREHRSEWAD N D YSA+
Sbjct: 396 -KVRNTSTS-ANAF-VTPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSAS 452

Query: 468 AIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
           ++K   CSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG   + +D +M RD+ LL
Sbjct: 453 SLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLL 512

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASA 586
           QLC+G+DE ++G+C +L+FAPID  F DDAPL+ SGFR+IPLD   + +   RTLDLAS+
Sbjct: 513 QLCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAGRTLDLASS 572

Query: 587 LEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVA 646
           LE+G    + T + S +   +RSV+TIAF+F +E H+Q+ VATMARQYVRSI+SSVQRV+
Sbjct: 573 LEVGSTA-QPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVS 631

Query: 647 LALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHH 706
           +A+SPS     AG +   G PEA TLARWIC SY+ +LGV+LL+ + +  E++LK LW +
Sbjct: 632 MAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDY 691

Query: 707 TDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQ 766
            DA++CCS K  PVFTFAN+ GL+MLET+LVALQD++L+KIFD+ GRKAL+ E P++M+Q
Sbjct: 692 EDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQ 751

Query: 767 GFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           G+  L GG+CLS MGR VS+E+AVAWKVL E+   HC+ F F+NWSFV
Sbjct: 752 GYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 799


>gi|90110446|gb|ABD90525.1| class III homeodomain-leucine zipper [Psilotum nudum]
          Length = 829

 Score =  996 bits (2576), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 502/841 (59%), Positives = 619/841 (73%), Gaps = 44/841 (5%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M  KD K G +D+GKYVRY+ EQVEALERLY+ECPKPS++RRQQLIRECPILSNIEPKQI
Sbjct: 4   MGIKDCK-GVMDSGKYVRYSNEQVEALERLYNECPKPSALRRQQLIRECPILSNIEPKQI 62

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKEA+RLQ VN KLTAMNKLLMEENDRLQKQV+QL+ ENGY RQ   
Sbjct: 63  KVWFQNRRCREKQRKEAARLQTVNGKLTAMNKLLMEENDRLQKQVAQLLRENGYLRQQLP 122

Query: 123 STTLATKDTSCESVVTSGQHHL-TPQHPPRDASP-AGLLSIAEETLTEFLSKATGTAVEW 180
              L T DTSC+SVVTSG  HL TPQHPP DA+  +G+LS+AEE L EFL KATGTA++W
Sbjct: 123 QGGLTTTDTSCDSVVTSGLQHLPTPQHPPHDAATHSGILSLAEEALAEFLQKATGTAIDW 182

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPR----------- 229
           +QMPGMKPGPDS G++ ISHGC+GVAARAC LVGLEP +V EILK RP            
Sbjct: 183 IQMPGMKPGPDSTGMINISHGCTGVAARACSLVGLEPAKVVEILKGRPSWHWDCRQLTKL 242

Query: 230 -GSAI------------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
             S +            +YA TTLAPARDF  LRYTS LEDGS V+CERSL N    PT 
Sbjct: 243 YSSNVGNNGTIEVLYMQMYAPTTLAPARDFCTLRYTSPLEDGSYVICERSLNNTHGPPTA 302

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           P +Q FVRAEMLP GYLIRPCEG GSI+ IVDHMDLE W+VPEVLRPLYESS  LA K T
Sbjct: 303 PHMQSFVRAEMLPCGYLIRPCEGSGSILIIVDHMDLESWTVPEVLRPLYESSAALAHKIT 362

Query: 337 MAALRQLRQMAQEVTQSSVNGWG-RRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDG 395
           + ALR LR +AQ    + V   G RRPAA+R+LSQRL+RGFN+AVNGF D+GWT + +DG
Sbjct: 363 IPALRYLRHLAQA---AGVEIPGVRRPAAVRSLSQRLARGFNDAVNGFGDDGWTTVPSDG 419

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSE 455
            DDVTV + S+ +          + F + +  VLCAKASMLLQNVPPA+L+RFLREHRSE
Sbjct: 420 TDDVTVAIKSNYNA-----RELGDQFTSGTAGVLCAKASMLLQNVPPALLVRFLREHRSE 474

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           WAD      S +A+++    +  +      SQV+    H +E +EF+E+IKLEG     E
Sbjct: 475 WADYGAAANSTSALQINNFGILDTHGDVCISQVLQQPIHAVEDDEFLELIKLEG---REE 531

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSG-KET 574
            + +PRD+FLLQLCSG++EN  G  A+++FAPID S  DD PLLPSGFR IPLD+   + 
Sbjct: 532 GSTLPRDIFLLQLCSGLEENTAGASAQMVFAPIDISIPDDVPLLPSGFRAIPLDNCLLDA 591

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
            SP+RTLDLAS L++G    +  NN   +   +RSV+T+AF+F+F SHMQE   TM+RQY
Sbjct: 592 GSPSRTLDLASTLDVGSTNGKYANNAVFH---LRSVLTLAFQFSFHSHMQESATTMSRQY 648

Query: 635 VRSIISSVQRVALALSPSNISSQAG-LRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           VR+++S+VQR+A+AL+PS +S   G  R   GTPE +  ARWIC SY+C LG+DL+    
Sbjct: 649 VRNVVSTVQRLAMALAPSRLSPHMGSSRQMPGTPEGVNYARWICRSYKCKLGIDLVSVDG 708

Query: 694 EGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGR 753
           E S+  LK +W   DA+MCCS K++PVFTFANQAGL+MLET+ V LQ+++ +K  D++ +
Sbjct: 709 ERSDEYLKAVWQCYDAIMCCSCKSMPVFTFANQAGLEMLETSSVTLQELSWDKTLDENAK 768

Query: 754 KALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
           K+L + F Q+MQQG+ACL  G+ LSSMGR VSYERAVAWKVL++++    + F+++NWSF
Sbjct: 769 KSLCSVFSQVMQQGYACLSAGVRLSSMGRVVSYERAVAWKVLDDDDNMRGVAFIYVNWSF 828

Query: 814 V 814
           +
Sbjct: 829 I 829


>gi|89514855|gb|ABD75302.1| class III homeodomain-leucine zipper protein C3HDZ1 [Psilotum
           nudum]
          Length = 827

 Score =  995 bits (2572), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 502/839 (59%), Positives = 617/839 (73%), Gaps = 44/839 (5%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M  KD K G +D+GKYVRY+ EQVEALERLY+ECPKPS++RRQQLIRECPILSNIEPKQI
Sbjct: 4   MGIKDCK-GVMDSGKYVRYSNEQVEALERLYNECPKPSALRRQQLIRECPILSNIEPKQI 62

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKEA+RLQ VN KLTAMNKLLMEENDRLQKQV+QL+ ENGY RQ   
Sbjct: 63  KVWFQNRRCREKQRKEAARLQTVNGKLTAMNKLLMEENDRLQKQVAQLLCENGYLRQQLP 122

Query: 123 STTLATKDTSCESVVTSGQHHL-TPQHPPRDASP-AGLLSIAEETLTEFLSKATGTAVEW 180
              L T DTSC+SVVTSG  HL TPQHPP DA+  +G+LS+AEE L EFL KATGTA++W
Sbjct: 123 QGGLTTTDTSCDSVVTSGLQHLPTPQHPPHDAATHSGILSLAEEALAEFLQKATGTAIDW 182

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPR----------- 229
           +QMPGMKPGPDS G++ ISHGC+GVAARAC LVGLEP +V EILKDRP            
Sbjct: 183 IQMPGMKPGPDSTGMINISHGCTGVAARACSLVGLEPAKVVEILKDRPSWHWDCRQLTKL 242

Query: 230 -GSAI------------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
             S +            +YA TTLAPARDF  LRYTS LEDGS V+CERSL N    PT 
Sbjct: 243 YSSNVGNNGTIEVLYMQMYAPTTLAPARDFCTLRYTSPLEDGSYVICERSLNNTHGPPTA 302

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           P +Q FVRAEMLP GYLIRPCEG GSI+ IVDHMDLE W+VPEVLRPLYESS  LA K T
Sbjct: 303 PHMQSFVRAEMLPCGYLIRPCEGSGSILIIVDHMDLESWTVPEVLRPLYESSAALAHKIT 362

Query: 337 MAALRQLRQMAQEVTQSSVNGWG-RRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDG 395
           + ALR LR +AQ    + V   G RRPAA+R+LSQRL+RGFN+AVNGF D+GWT + +DG
Sbjct: 363 IPALRYLRHLAQA---AGVEIPGVRRPAAVRSLSQRLARGFNDAVNGFGDDGWTTVPSDG 419

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSE 455
            DDVTV + S+ +          + F + +  VLCAKASMLLQNVPPA+L+RFLREHRSE
Sbjct: 420 TDDVTVAIKSNYNA-----RELGDQFTSGTAGVLCAKASMLLQNVPPALLVRFLREHRSE 474

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           WAD      S +A+++    +  +      SQV+    H +E +EF+E+IKLEG     E
Sbjct: 475 WADYGAAANSTSALQINNFGILDTHGDVCISQVLQQPIHAVEDDEFLELIKLEG---REE 531

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSG-KET 574
            + +PRD+FLLQLCSG++EN  G  A+++FAPID S  DD PLLPSGFR IPLD+   + 
Sbjct: 532 GSTLPRDIFLLQLCSGLEENTAGASAQMVFAPIDISIPDDVPLLPSGFRAIPLDNCLLDA 591

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
            SP+RTLDLAS L++G    +  NN   +   +RSV+T+AF+F+F SHMQE   TM+RQY
Sbjct: 592 GSPSRTLDLASTLDVGSTNGKYANNAVFH---LRSVLTLAFQFSFHSHMQESATTMSRQY 648

Query: 635 VRSIISSVQRVALALSPSNISSQAG-LRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           VR+++S+VQR+A+AL+PS +S   G  R   GTPE +  ARWIC SY+C LG+DL+    
Sbjct: 649 VRNVVSTVQRLAMALAPSRLSPHMGSSRQMPGTPEGVNYARWICRSYKCKLGIDLVSVDG 708

Query: 694 EGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGR 753
           E S+  LK +W   DA+MCCS K++PVFTFANQAGL+MLET+ V LQ+++ EK  D++ +
Sbjct: 709 ERSDEYLKAVWQCYDAIMCCSCKSMPVFTFANQAGLEMLETSSVTLQELSWEKTLDENAK 768

Query: 754 KALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWS 812
           K+L + F Q+MQQG+ACL  G+ LSSMGR  SYERAVAWKVL++++    + F+++NWS
Sbjct: 769 KSLCSVFSQVMQQGYACLSAGVRLSSMGRVASYERAVAWKVLDDDDNMRGVAFIYVNWS 827


>gi|89514857|gb|ABD75303.1| class III homeodomain-leucine zipper protein C3HDZ2 [Psilotum
           nudum]
          Length = 819

 Score =  989 bits (2558), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/840 (60%), Positives = 617/840 (73%), Gaps = 59/840 (7%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           KDGK G    GKYVRYT EQV+ALE LY+ECPKPSS+RRQQLI+ECPILSNIEPKQIKVW
Sbjct: 7   KDGKGGIDAAGKYVRYTTEQVDALESLYNECPKPSSLRRQQLIKECPILSNIEPKQIKVW 66

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRRCREKQRKEASRLQ VN KLTAMNKLLMEENDRLQKQV+QL+YENGY RQ  Q   
Sbjct: 67  FQNRRCREKQRKEASRLQNVNAKLTAMNKLLMEENDRLQKQVAQLLYENGYIRQQLQHGG 126

Query: 126 LATKDTSCESVVTSGQHHL-TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
           + T DTSC+SVVTSG  HL TPQHP  DA+ +G+LS+AEETLTEFL KATGTA++W+QMP
Sbjct: 127 ITT-DTSCDSVVTSGLQHLSTPQHPQTDAAHSGILSLAEETLTEFLGKATGTAIDWIQMP 185

Query: 185 GMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------RGSAILYAL- 237
           GMKPGPD  G+V ISHGC GVAARACGLVGLEP RV E+LKDRP      R  A LYA  
Sbjct: 186 GMKPGPDMTGMVNISHGCPGVAARACGLVGLEPARVVEVLKDRPSWHRDCRQLATLYATN 245

Query: 238 -----------------TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQ 280
                            TTLAPARDF  LRYTS+LEDGS V+CERSL      PT PP+Q
Sbjct: 246 TNNNGKMEVLYMQMYAPTTLAPARDFCTLRYTSLLEDGSYVICERSLNGTLGVPTAPPMQ 305

Query: 281 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL 340
            FVRAEM PSGYLIRPCEG GS+I IVDHMDLEPW+VPEVLRPLYESS +LA K T+ A+
Sbjct: 306 SFVRAEMHPSGYLIRPCEGSGSVIIIVDHMDLEPWTVPEVLRPLYESSAILAHKITIEAM 365

Query: 341 RQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVT 400
           R L+Q+AQ+     V G  ++P A+ +LSQRL+RGFN+AVNGF D+GWT + N+GMDDVT
Sbjct: 366 RHLQQLAQQAA-IEVPGGVQQPPAVWSLSQRLARGFNDAVNGFADDGWTSVSNEGMDDVT 424

Query: 401 VLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNN 460
           V+V S+P    G  LS           VLCAKASMLLQNVPP +L+RFLREHRSEWADNN
Sbjct: 425 VIVKSNPK---GRELS-----------VLCAKASMLLQNVPPGLLVRFLREHRSEWADNN 470

Query: 461 IDV----YSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
            +     +S   I  GPC         + SQ++ P     + +EF+E++K EG  H    
Sbjct: 471 SETNALRFSNLGIS-GPCG------DVYNSQILQPQFPADQRDEFLELLKFEGPQHGTLS 523

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD-SGKETS 575
           ++   DMFLLQLCSG++E+A G  A+++FAPID+S +DD  LLPSGFR+IPL+ S     
Sbjct: 524 SM---DMFLLQLCSGIEESAAGASAQIVFAPIDSSISDDVLLLPSGFRVIPLENSSLGGG 580

Query: 576 SPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYV 635
           +P RTLDLAS LEIG  G +  N+    +  +RSV+TIAF+F FESH+QE VATMARQYV
Sbjct: 581 TPTRTLDLASTLEIGLGGCKHANDNPMLN--LRSVLTIAFQFTFESHIQEKVATMARQYV 638

Query: 636 RSIISSVQRVALALSPSNISS-QAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
           RS+ SSVQ++A+ALSP  + +  A LR   G+P+ L L  W+C SYR  LG+DL++ +SE
Sbjct: 639 RSVASSVQQIAMALSPCCMDTPSAPLRKMAGSPKGLALVHWMCQSYRFNLGMDLVRVNSE 698

Query: 695 GSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 754
            +E   K +WHH DA+MCCS K++P+FTFANQAGL+MLETT +AL +++ EK  D+   K
Sbjct: 699 NNEEYFKLVWHHCDAIMCCSCKSIPIFTFANQAGLEMLETTSIALPEVSWEKTLDEDEIK 758

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            + + F Q++QQG+ACL  GI  SS+GRP SY+RA+AWKV +E+E    + F++ NWSF+
Sbjct: 759 NMGSVFNQVLQQGYACLPAGIGRSSLGRPTSYDRAIAWKVTDEDELITGVAFLYHNWSFL 818


>gi|225449048|ref|XP_002274194.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Vitis
           vinifera]
          Length = 841

 Score =  984 bits (2543), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/829 (59%), Positives = 612/829 (73%), Gaps = 46/829 (5%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           KYVRYT EQVEALER+Y ECPKPSS RRQQLIRECPILSNIE KQIKVWFQNRRCREKQ+
Sbjct: 28  KYVRYTAEQVEALERVYAECPKPSSTRRQQLIRECPILSNIESKQIKVWFQNRRCREKQK 87

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
           KEA +LQ+VN+KL +MNKLLMEEN+RLQKQVSQLVYENGY +Q  Q+ T  T DT C+S+
Sbjct: 88  KEAVQLQSVNKKLNSMNKLLMEENERLQKQVSQLVYENGYMKQQLQNVTATTTDTRCDSL 147

Query: 137 VTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGI 195
           V       TPQH  R  + P GLLSIAEE + EFLSKA GTAV+WVQ+PGMKPGPDSVG 
Sbjct: 148 VA------TPQHSSRTGNNPIGLLSIAEEAMGEFLSKAKGTAVDWVQIPGMKPGPDSVGT 201

Query: 196 VAISHGCSGVAARACGLVGLEPTRVAEILKDR----------------PRGSAIL----- 234
           VAISH C+GVAARAC LV LEPT + EILKDR                P G+  +     
Sbjct: 202 VAISHSCNGVAARACSLVSLEPTEIMEILKDRQSWFRDCRKLEVFAKFPAGNGGILELIY 261

Query: 235 ---YALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
              YA TTLAPARDFW LRYTS LEDGSLVVCERS+     GP       FVRA+MLPSG
Sbjct: 262 MQVYAPTTLAPARDFWTLRYTSSLEDGSLVVCERSMSGSGAGPNPSTASQFVRAKMLPSG 321

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVT 351
           YLIRPCEGGGSIIHIVDH+DLE WSVPEVL+PLY+SS ++AQK T+AAL  +RQ+AQE +
Sbjct: 322 YLIRPCEGGGSIIHIVDHLDLEAWSVPEVLQPLYKSSKLVAQKMTVAALHHIRQIAQETS 381

Query: 352 QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLM 411
               +  G++PA LRA  Q+LSRGFN+A+NGF D+GW++M  DG +D+ + VNS+ +   
Sbjct: 382 GDVTHTLGKQPAVLRAFRQKLSRGFNDAINGFNDDGWSLMQIDGAEDLIISVNSAKNLST 441

Query: 412 GLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKV 471
             N + A   P     +LC KA+MLLQNV P++++RFLREHRSEWAD ++D Y+AA+++ 
Sbjct: 442 ISNSTAALSLPG---GILCVKAAMLLQNVSPSLMVRFLREHRSEWADFSVDAYAAASLRG 498

Query: 472 GPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA-IMPRDMFLLQLC 529
              +LPG     F G+Q  + L  T E+ E +E+I+LEG   S E+A +M R++ LLQ+C
Sbjct: 499 DSFALPGLSPSQFSGNQTTMSLGITAEN-EILEIIQLEGHALSQEEASVMWRNIHLLQIC 557

Query: 530 SGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSG----KETSSPNRTLDLAS 585
           +G+D+NA   C+EL+F+PID  F DDAP+L SGFRI+ LD+     ++  +  R ++LAS
Sbjct: 558 NGVDDNAGEACSELVFSPIDEMFPDDAPILSSGFRILELDAKTCDRQDMLAAKRMMNLAS 617

Query: 586 ALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRV 645
            LE+  +        S++S   RSV+ IAF+F FESH+Q +V TMARQY R++ISSVQRV
Sbjct: 618 NLEVRSSDATGCTASSSDS---RSVLIIAFQFLFESHLQGNVVTMARQYARNVISSVQRV 674

Query: 646 ALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWH 705
           A+A++PS +  +   ++  G+PEALTLARWIC SY  +LG  LLKS+  G +S+LK LWH
Sbjct: 675 AMAITPSGLHGRP--KSTSGSPEALTLARWICQSYSFHLGDQLLKSNYHGGDSVLKQLWH 732

Query: 706 HTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQ 765
           H DA++CCSLK  PVF FANQAGLDMLETTLVALQD++L+KIFD+ GRKAL    PQ+MQ
Sbjct: 733 HQDAILCCSLKLHPVFIFANQAGLDMLETTLVALQDVSLDKIFDEAGRKALCNVVPQVMQ 792

Query: 766 QGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           QGFA +  GI +S+MGR VS+E+A+AWKVL EE T HC+ F FINWSFV
Sbjct: 793 QGFALVPAGIGMSTMGRHVSFEQAIAWKVLTEENTVHCLAFAFINWSFV 841


>gi|296086017|emb|CBI31458.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score =  981 bits (2537), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/829 (59%), Positives = 612/829 (73%), Gaps = 46/829 (5%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           KYVRYT EQVEALER+Y ECPKPSS RRQQLIRECPILSNIE KQIKVWFQNRRCREKQ+
Sbjct: 27  KYVRYTAEQVEALERVYAECPKPSSTRRQQLIRECPILSNIESKQIKVWFQNRRCREKQK 86

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
           KEA +LQ+VN+KL +MNKLLMEEN+RLQKQVSQLVYENGY +Q  Q+ T  T DT C+S+
Sbjct: 87  KEAVQLQSVNKKLNSMNKLLMEENERLQKQVSQLVYENGYMKQQLQNVTATTTDTRCDSL 146

Query: 137 VTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGI 195
           V       TPQH  R  + P GLLSIAEE + EFLSKA GTAV+WVQ+PGMKPGPDSVG 
Sbjct: 147 VA------TPQHSSRTGNNPIGLLSIAEEAMGEFLSKAKGTAVDWVQIPGMKPGPDSVGT 200

Query: 196 VAISHGCSGVAARACGLVGLEPTRVAEILKDR----------------PRGSAIL----- 234
           VAISH C+GVAARAC LV LEPT + EILKDR                P G+  +     
Sbjct: 201 VAISHSCNGVAARACSLVSLEPTEIMEILKDRQSWFRDCRKLEVFAKFPAGNGGILELIY 260

Query: 235 ---YALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
              YA TTLAPARDFW LRYTS LEDGSLVVCERS+     GP       FVRA+MLPSG
Sbjct: 261 MQVYAPTTLAPARDFWTLRYTSSLEDGSLVVCERSMSGSGAGPNPSTASQFVRAKMLPSG 320

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVT 351
           YLIRPCEGGGSIIHIVDH+DLE WSVPEVL+PLY+SS ++AQK T+AAL  +RQ+AQE +
Sbjct: 321 YLIRPCEGGGSIIHIVDHLDLEAWSVPEVLQPLYKSSKLVAQKMTVAALHHIRQIAQETS 380

Query: 352 QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLM 411
               +  G++PA LRA  Q+LSRGFN+A+NGF D+GW++M  DG +D+ + VNS+ +   
Sbjct: 381 GDVTHTLGKQPAVLRAFRQKLSRGFNDAINGFNDDGWSLMQIDGAEDLIISVNSAKNLST 440

Query: 412 GLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKV 471
             N + A   P     +LC KA+MLLQNV P++++RFLREHRSEWAD ++D Y+AA+++ 
Sbjct: 441 ISNSTAALSLPG---GILCVKAAMLLQNVSPSLMVRFLREHRSEWADFSVDAYAAASLRG 497

Query: 472 GPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA-IMPRDMFLLQLC 529
              +LPG     F G+Q  + L  T E+ E +E+I+LEG   S E+A +M R++ LLQ+C
Sbjct: 498 DSFALPGLSPSQFSGNQTTMSLGITAEN-EILEIIQLEGHALSQEEASVMWRNIHLLQIC 556

Query: 530 SGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSG----KETSSPNRTLDLAS 585
           +G+D+NA   C+EL+F+PID  F DDAP+L SGFRI+ LD+     ++  +  R ++LAS
Sbjct: 557 NGVDDNAGEACSELVFSPIDEMFPDDAPILSSGFRILELDAKTCDRQDMLAAKRMMNLAS 616

Query: 586 ALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRV 645
            LE+  +        S++S   RSV+ IAF+F FESH+Q +V TMARQY R++ISSVQRV
Sbjct: 617 NLEVRSSDATGCTASSSDS---RSVLIIAFQFLFESHLQGNVVTMARQYARNVISSVQRV 673

Query: 646 ALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWH 705
           A+A++PS +  +   ++  G+PEALTLARWIC SY  +LG  LLKS+  G +S+LK LWH
Sbjct: 674 AMAITPSGLHGRP--KSTSGSPEALTLARWICQSYSFHLGDQLLKSNYHGGDSVLKQLWH 731

Query: 706 HTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQ 765
           H DA++CCSLK  PVF FANQAGLDMLETTLVALQD++L+KIFD+ GRKAL    PQ+MQ
Sbjct: 732 HQDAILCCSLKLHPVFIFANQAGLDMLETTLVALQDVSLDKIFDEAGRKALCNVVPQVMQ 791

Query: 766 QGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           QGFA +  GI +S+MGR VS+E+A+AWKVL EE T HC+ F FINWSFV
Sbjct: 792 QGFALVPAGIGMSTMGRHVSFEQAIAWKVLTEENTVHCLAFAFINWSFV 840


>gi|168004063|ref|XP_001754731.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693835|gb|EDQ80185.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 821

 Score =  971 bits (2509), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/826 (58%), Positives = 613/826 (74%), Gaps = 36/826 (4%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+YHECPKPSSIRR QLI+ECPIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWFQNRRCREK 63

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQS--TTLATKDTS 132
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  +N   RQ   +    +A+ DTS
Sbjct: 64  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLDNHALRQQLPNLPAGVASTDTS 123

Query: 133 CESVVTSG-QHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           C+S VT G   HLT QH   DASPAGLLS+AEETLT+FL+KATGTAV+W+Q+PGMKPGPD
Sbjct: 124 CDSAVTGGLPQHLTSQHSSPDASPAGLLSMAEETLTDFLAKATGTAVDWIQLPGMKPGPD 183

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           ++GI+AISHGC G+AARACGL  L+ ++VAEILKDRP                   G  I
Sbjct: 184 AIGIIAISHGCVGIAARACGLAALDFSKVAEILKDRPGWSQDCRRMEVLGTLPTGNGGTI 243

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 +YA TTLAPARDF  LRYT++LEDG+LV+CERSL    NGPTMPPVQ F+RAEM
Sbjct: 244 ELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLTGKHNGPTMPPVQSFIRAEM 303

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
            PSGYLIRPCEGGG IIHIVDH++ EPWSVPEVLRPLYES  VLA K+T+AALR LR++A
Sbjct: 304 FPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESPAVLAHKSTIAALRYLRRIA 363

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
            E +   +   G+ PA +R LSQRL++GFN+AVNGF D+GW  M +DGMDDV+V++N++P
Sbjct: 364 AEESGEIIIRNGQHPAVIRTLSQRLTKGFNDAVNGFGDDGWVPMESDGMDDVSVMLNATP 423

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
             + G  ++      ++   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD+ ID  +A 
Sbjct: 424 KSMEG-QIATDKLLFSLGGGILCAKASMLLQNVPPALLIRFLREHRSEWADHEIDANAAT 482

Query: 468 AIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP-EDAIMPRDMFLL 526
           A + G  +   SR      Q+ LPLA   E  EF+EV+KLE  GHS  + +++ RD FLL
Sbjct: 483 AFR-GASNGHVSRGRMSHVQLPLPLAQFGEQGEFLEVVKLE--GHSAVQHSVLSRDSFLL 539

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASA 586
           QLCSG++E AVG  A+L+FAPIDA+ ++D PLLPSGFR+IP+DS  +    NRTLDLAS 
Sbjct: 540 QLCSGIEEGAVGAGAQLVFAPIDAAVSEDIPLLPSGFRVIPVDSSVDGIGLNRTLDLAST 599

Query: 587 LEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVA 646
           LE   AG    +  + +S+ +RSV+TIAF+FA+E H +E  A MARQYVR++++SVQRVA
Sbjct: 600 LEDHEAGLNGESKSNGSSSQVRSVLTIAFQFAYEVHTRETCAVMARQYVRTVVASVQRVA 659

Query: 647 LALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHH 706
           +AL+P    S+   R  LG  +A++LAR I  SYR  LG+DL++    G+E++ K  WHH
Sbjct: 660 MALAP----SRGQPRPALGNSDAISLARHILSSYRVQLGMDLVRPEVGGTEALFKVFWHH 715

Query: 707 TDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQ 766
           +DA++CC+ K  P F FAN+AGL+M ETT  +LQD+  +K  D+   K  +A F Q++QQ
Sbjct: 716 SDAIVCCAWKGTPEFVFANRAGLEMFETTSSSLQDLAWDKTLDEDSLKLSYATFTQVLQQ 775

Query: 767 GFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWS 812
           G+ CL  G+ +SS GR V+YERA+AWKVL+++ET  CI F+F+NWS
Sbjct: 776 GYCCLPSGVRISSTGRTVTYERALAWKVLDDDETTQCIAFLFMNWS 821


>gi|110349524|gb|ABG73237.1| class III HD-Zip protein HB12 [Physcomitrella patens]
          Length = 844

 Score =  962 bits (2488), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/846 (57%), Positives = 615/846 (72%), Gaps = 48/846 (5%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           D   G   +GKYVRYT EQVEALER+YHECPKPSSIRR QLI+ECPIL+NIEPKQIKVWF
Sbjct: 7   DKYKGMDSSGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWF 66

Query: 67  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH------ 120
           QNRRCREKQRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  +N   RQ       
Sbjct: 67  QNRRCREKQRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLDNHALRQQLPNLPV 126

Query: 121 -------TQSTTLATKDTSCESVVTSG-QHHLTPQHPPRDASPAGLLSIAEETLTEFLSK 172
                  +    +A+ DTSC+S VT G   HLT QH   DASPAGLLS+AEETLT+FL+K
Sbjct: 127 PDGKCRLSGQAGVASTDTSCDSAVTGGLPQHLTSQHSSPDASPAGLLSMAEETLTDFLAK 186

Query: 173 ATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP---- 228
           ATGTAV+W+Q+PGMKPGPD++GI+AISHGC G+AARACGL  L+ ++VAEILKDRP    
Sbjct: 187 ATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGLAALDFSKVAEILKDRPGWSQ 246

Query: 229 --------------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLK 268
                          G  I      +YA TTLAPARDF  LRYT++LEDG+LV+CERSL 
Sbjct: 247 DCRRMEVLGTLPTGNGGTIELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLT 306

Query: 269 NIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESS 328
              NGPTMPPVQ F+RAEM PSGYLIRPCEGGG IIHIVDH++ EPWSVPEVLRPLYES 
Sbjct: 307 GKHNGPTMPPVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESP 366

Query: 329 TVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW 388
            VLA K+T+AALR LR++A E +   +   G+ PA +R LSQRL++GFN+AVNGF D+GW
Sbjct: 367 AVLAHKSTIAALRYLRRIAAEESGEIIIRNGQHPAVIRTLSQRLTKGFNDAVNGFGDDGW 426

Query: 389 TVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRF 448
             M +DGMDDV+V++N++P  + G  ++      ++   +LCAKASMLLQNVPPA+L+RF
Sbjct: 427 VPMESDGMDDVSVMLNATPKSMEG-QIATDKLLFSLGGGILCAKASMLLQNVPPALLIRF 485

Query: 449 LREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLE 508
           LREHRSEWAD+ ID  +A A + G  +   SR      Q+ LPLA   E  EF+EV+KLE
Sbjct: 486 LREHRSEWADHEIDANAATAFR-GASNGHVSRGRMSHVQLPLPLAQFGEQGEFLEVVKLE 544

Query: 509 GVGHSP-EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIP 567
             GHS  + +++ RD FLLQLCSG++E AVG  A+L+FAPIDA+ ++D PLLPSGFR+IP
Sbjct: 545 --GHSAVQHSVLSRDSFLLQLCSGIEEGAVGAGAQLVFAPIDAAVSEDIPLLPSGFRVIP 602

Query: 568 LDSG-KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEH 626
           +DS   +    NRTLDLAS LE   AG    +  + +S+ +RSV+TIAF+FA+E H +E 
Sbjct: 603 VDSSVVDGIGLNRTLDLASTLEDHEAGLNGESKSNGSSSQVRSVLTIAFQFAYEVHTRET 662

Query: 627 VATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGV 686
            A MARQYVR++++SVQRVA+AL+P    S+   R  LG  +A++LAR I  SYR  LG+
Sbjct: 663 CAVMARQYVRTVVASVQRVAMALAP----SRGQPRPALGNSDAISLARHILSSYRVQLGM 718

Query: 687 DLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEK 746
           DL++    G+E++ K  WHH+DA++CC+ K  P F FAN+AGL+M ETT  +LQD+  +K
Sbjct: 719 DLVRPEVGGTEALFKVFWHHSDAIVCCAWKGTPEFVFANRAGLEMFETTSSSLQDLAWDK 778

Query: 747 IFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICF 806
             D+   K  +A F Q++QQG+ CL  G+ +SS GR V+YERA+AWKVL+++ET  CI F
Sbjct: 779 TLDEDSLKLSYATFTQVLQQGYCCLPSGVRISSTGRTVTYERALAWKVLDDDETTQCIAF 838

Query: 807 MFINWS 812
           +F+NWS
Sbjct: 839 LFMNWS 844


>gi|89953822|gb|ABD75297.1| class III homeodomain-leucine zipper protein C3HDZ1 [Physcomitrella
           patens]
          Length = 833

 Score =  962 bits (2487), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/838 (57%), Positives = 613/838 (73%), Gaps = 48/838 (5%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+YHECPKPSSIRR QLI+ECPIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWFQNRRCREK 63

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH-------------T 121
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  +N   RQ              +
Sbjct: 64  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLDNHALRQQLPNLPVPDGKCRLS 123

Query: 122 QSTTLATKDTSCESVVTSG-QHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
               +A+ DTSC+S VT G   HLT QH   DASPAGLLS+AEETLT+FL+KATGTAV+W
Sbjct: 124 GQAGVASTDTSCDSAVTGGLPQHLTSQHSSPDASPAGLLSMAEETLTDFLAKATGTAVDW 183

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           +Q+PGMKPGPD++GI+AISHGC G+AARACGL  L+ ++VAEILKDRP            
Sbjct: 184 IQLPGMKPGPDAIGIIAISHGCVGIAARACGLAALDFSKVAEILKDRPGWSQDCRRMEVL 243

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I      +YA TTLAPARDF  LRYT++LEDG+LV+CERSL    NGPTM
Sbjct: 244 GTLPTGNGGTIELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLTGKHNGPTM 303

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           PPVQ F+RAEM PSGYLIRPCEGGG IIHIVDH++ EPWSVPEVLRPLYES  VLA K+T
Sbjct: 304 PPVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESPAVLAHKST 363

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           +AALR LR++A E +   +   G+ PA +R LSQRL++GFN+AVNGF D+GW  M +DGM
Sbjct: 364 IAALRYLRRIAAEESGEIIIRNGQHPAVIRTLSQRLTKGFNDAVNGFGDDGWVPMESDGM 423

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           DDV+V++N++P  + G  ++      ++   +LCAKASMLLQNVPPA+L+RFLREHRSEW
Sbjct: 424 DDVSVMLNATPKSMEG-QIATDKLLFSLGGGILCAKASMLLQNVPPALLIRFLREHRSEW 482

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP-E 515
           AD+ ID  +A A + G  +   SR      Q+ LPLA   E  EF+EV+KLE  GHS  +
Sbjct: 483 ADHEIDANAATAFR-GASNGHVSRGRMSHVQLPLPLAQFGEQGEFLEVVKLE--GHSAVQ 539

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSG-KET 574
            +++ RD FLLQLCSG++E AVG  A+L+FAPIDA+ ++D PLLPSGFR+IP+DS   + 
Sbjct: 540 HSVLSRDSFLLQLCSGIEEGAVGAGAQLVFAPIDAAVSEDIPLLPSGFRVIPVDSSVVDG 599

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
              NRTLDLAS LE   AG    +  + +S+ +RSV+TIAF+FA+E H +E  A MARQY
Sbjct: 600 IGLNRTLDLASTLEDHEAGLNGESKSNGSSSQVRSVLTIAFQFAYEVHTRETCAVMARQY 659

Query: 635 VRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
           VR++++SVQRVA+AL+P    S+   R  LG  +A++LAR I  SYR  LG+DL++    
Sbjct: 660 VRTVVASVQRVAMALAP----SRGQPRPALGNSDAISLARHILSSYRVQLGMDLVRPEVG 715

Query: 695 GSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 754
           G+E++ K  WHH+DA++CC+ K  P F FAN+AGL+M ETT  +LQD+  +K  D+   K
Sbjct: 716 GTEALFKVFWHHSDAIVCCAWKGTPEFVFANRAGLEMFETTSSSLQDLAWDKTLDEDSLK 775

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWS 812
             +A F Q++QQG+ CL  G+ +SS GR V+YERA+AWKVL+++ET  CI F+F+NWS
Sbjct: 776 LSYATFTQVLQQGYCCLPSGVRISSTGRTVTYERALAWKVLDDDETTQCIAFLFMNWS 833


>gi|349500387|dbj|BAL02986.1| class III homeodomain-leucine zipper protein, partial [Gnetum
           parvifolium]
          Length = 705

 Score =  954 bits (2467), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/711 (67%), Positives = 567/711 (79%), Gaps = 45/711 (6%)

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 119
            QIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ
Sbjct: 1   NQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQ 60

Query: 120 HTQ-STTLATKDTSCESVVTSGQH--HLTPQHPPRDASPAGLLSIAEETLTEFLSKATGT 176
               + ++A  DTSCESVVTSGQH  + TPQHPPRDASPAGLLSIAEETLTEFLSKA G 
Sbjct: 61  QLHNAASVAGADTSCESVVTSGQHQPNPTPQHPPRDASPAGLLSIAEETLTEFLSKAKGA 120

Query: 177 AVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPR------- 229
           AV+WVQMPGMKPGPDS+GIVAIS+ C+GVAARACGLVGLEPT+VAEILKDRP        
Sbjct: 121 AVDWVQMPGMKPGPDSIGIVAISNTCTGVAARACGLVGLEPTKVAEILKDRPSWLRDCRC 180

Query: 230 ------------GSAILYALTTLAP-----ARDFWLLRYTSVLEDGSLVVCERSLKNIQN 272
                       G+  +  + T AP     ARDFW LRYT+VL+DGSLVVCERSL +   
Sbjct: 181 LEVMTAYPTGNGGTIEVLYMQTYAPTINLSARDFWSLRYTTVLDDGSLVVCERSLSSTLA 240

Query: 273 GPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLA 332
           G  +P V +FVRAEMLPSGY+I+PCEGGGSII IVDH DLEPWSVPEVLRPLYESST+LA
Sbjct: 241 GQVLPSVANFVRAEMLPSGYIIQPCEGGGSIIRIVDHFDLEPWSVPEVLRPLYESSTILA 300

Query: 333 QKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM- 391
           QK T+AA+R+LRQ+AQE +   V GWGR+PA LR  SQRLSRGFNEAVNGF DEGW++M 
Sbjct: 301 QKMTIAAMRRLRQIAQESSGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFADEGWSIMT 360

Query: 392 -GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR 450
             +  ++DVT+ +NSSP K      +  + F +    +LCAK+SMLLQNVPPA+L+RFLR
Sbjct: 361 TADGSVEDVTISINSSPTKHASAAAAAFSVFGS-GGGILCAKSSMLLQNVPPALLIRFLR 419

Query: 451 EHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEG 509
           EHRSEWAD+NID YSAAAIK  P ++PG+R G+F GSQVILPLAHT+E+EEF+EVIKL+G
Sbjct: 420 EHRSEWADSNIDAYSAAAIKSSPFTIPGTRAGSFSGSQVILPLAHTVENEEFLEVIKLDG 479

Query: 510 VGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD 569
            G + EDA++ RDMFLLQLCSG+DE+A G CAEL+ APID SFADDAPLLPSGFR+IPL+
Sbjct: 480 HGLAHEDALLSRDMFLLQLCSGVDESAAGGCAELVLAPIDESFADDAPLLPSGFRVIPLE 539

Query: 570 SGKETSSPN--RTLDLASALEIGPAGNRATNN-----YSTNSTCMRSVMTIAFEFAFESH 622
           S  ++   N  RTLDLASALE+G   +RA+NN       TNS  +RSV+TIAF+F++ESH
Sbjct: 540 SRSDSPGANAGRTLDLASALEVGSGASRASNNSEGGAAGTNSN-VRSVLTIAFQFSYESH 598

Query: 623 MQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRC 682
           ++E+VA MARQYVRS+ +SVQRVA+ALSPS ++     R P G PEALTLARWIC SYR 
Sbjct: 599 LRENVAAMARQYVRSVAASVQRVAMALSPSRLAP----RPPPGGPEALTLARWICQSYRL 654

Query: 683 YLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDM 731
           ++GVDL +   E  +S+LK LWHH++A++CCSLK  ++PVFTFANQAGLDM
Sbjct: 655 HVGVDLFRGDGEAGDSVLKLLWHHSEAIVCCSLKVESIPVFTFANQAGLDM 705


>gi|414864315|tpg|DAA42872.1| TPA: putative homeobox/lipid-binding domain family protein, partial
           [Zea mays]
          Length = 917

 Score =  942 bits (2435), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/734 (63%), Positives = 558/734 (76%), Gaps = 36/734 (4%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           K   +D+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPKQIKVWFQN
Sbjct: 19  KVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQN 78

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLAT 128
           RRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + RQ  Q+T+LA 
Sbjct: 79  RRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTSLAN 138

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            DTSCES VT+      P +  RDAS P+GLL+IAEET TEFLSKATGTA++WVQMPGMK
Sbjct: 139 -DTSCESNVTA------PPNAIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 191

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDSVGIVAISHGC GVAARACGLV LEPT+V EILKDRP                   
Sbjct: 192 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSWFRDCRSLEVFTMFPAGN 251

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I      +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP     Q FV
Sbjct: 252 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQFV 311

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T  ALR L
Sbjct: 312 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 371

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV V  
Sbjct: 372 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVVAC 431

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NS+       N     G P     ++CAKASMLLQ+VPPA+L+RFLREHRSEWAD NID 
Sbjct: 432 NSTKKIRNNSNAGITFGAPG---GIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDA 488

Query: 464 YSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           Y A+++K   CSLPG R   F G Q+I+PLAHT+E+EE +EV++LEG   + ++A++ RD
Sbjct: 489 YLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRD 548

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           + LLQLC+G+DE +VG+  +L+FAPID  F DDAPL+ SGFR+IPLD   +  S  RTLD
Sbjct: 549 IHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDMKTDGVSSGRTLD 608

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           LAS+L++G A  +A+ +   +   +RSV+TIAF+F +E H+Q+ VATMARQYVRS++S+V
Sbjct: 609 LASSLDVGSAAPQASGDAPPDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSVVSAV 668

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKN 702
           QRV++A+SPS     AG R   G PEA TLARW+C SY  +LGV+LL  S E  E++LK 
Sbjct: 669 QRVSMAISPSQSGLNAGQRMLSGFPEAATLARWVCQSYHYHLGVELLNQSDEAGEALLKM 728

Query: 703 LWHHTDAVMCCSLK 716
           LWHH DAV+CCS K
Sbjct: 729 LWHHPDAVLCCSFK 742


>gi|168024520|ref|XP_001764784.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|90110442|gb|ABD90523.1| class III homeodomain-leucine zipper [Physcomitrella patens]
 gi|162684078|gb|EDQ70483.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  925 bits (2390), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/872 (54%), Positives = 608/872 (69%), Gaps = 79/872 (9%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+YHECPKPSSIRR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 63

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHT------------- 121
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQ               
Sbjct: 64  QRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFPDGRHRLP 123

Query: 122 ------------------QSTT-------------LATKDTSCESVVTSG-QHHLTPQHP 149
                             +S+T             +A+ DTSC+S VT G  H LTPQH 
Sbjct: 124 SQILQSPLKKEGAVNGGDESSTQGGICVKVHGQAGIASTDTSCDSAVTGGLPHRLTPQHS 183

Query: 150 PRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARA 209
           PRD+SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD++GI+AISHGC G+AARA
Sbjct: 184 PRDSSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARA 243

Query: 210 CGLVGLEPTRVAEILKDRPR------------------GSAI------LYALTTLAPARD 245
           CGLV L+ ++V E+LKDRPR                  G  I      +YA TTLAPARD
Sbjct: 244 CGLVALDISKVTEVLKDRPRWLQDCRRMEILGALPTGNGGTIELLYTQMYAPTTLAPARD 303

Query: 246 FWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIH 305
           +  LRYT++LEDG++V+CERSL  +Q GPTMPPVQ FVR EM PSGYLIRPC+GGG IIH
Sbjct: 304 YCTLRYTTILEDGNVVICERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCDGGGCIIH 363

Query: 306 IVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAAL 365
           +VDH + EPWSVPEVLRPLYES  VL+QK+T+AALR LR++A E +   V   G+ PA L
Sbjct: 364 VVDHYNNEPWSVPEVLRPLYESPAVLSQKSTLAALRHLRRLAAEESGEGVPRNGQHPAVL 423

Query: 366 RALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVS 425
           R L QRL++GFN AVNGF D+GW    +DG+DDV+V++N++P  + G  ++      ++ 
Sbjct: 424 RTLCQRLTKGFNNAVNGFPDDGWEATISDGLDDVSVMLNATPKSMEG-QIASDKLLYSLG 482

Query: 426 NAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFG 485
             +LCAKASMLLQNVP ++L+RFLREHRSEWAD +ID   A+    G   +P  R G   
Sbjct: 483 GGILCAKASMLLQNVPSSLLIRFLREHRSEWADYDIDANVASFRSNGNGYVP--RCGGVS 540

Query: 486 S-QVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELI 544
             Q+ LPLA++ E  E +EV+K+EG   S +  ++ RD FLLQLCSG+DE+AVG CA+L+
Sbjct: 541 HVQLPLPLAYSGESGEILEVVKVEG-HSSVQHMVLSRDTFLLQLCSGVDESAVGACAQLV 599

Query: 545 FAPIDASFADDAPLLPSGFRIIPLDSG-KETSSPNRTLDLASALEIGPAGNRATNNYSTN 603
           FAP+D + ADD PLLPSGF + P+D+   +    +RTLDLAS LE G       +  S+N
Sbjct: 600 FAPVDVALADDIPLLPSGFCVSPIDTNVVDGFGLDRTLDLASTLEGGNDLRLNGDAKSSN 659

Query: 604 STC-MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRT 662
           S   MRSV+TIAF+FA+E H +E VA MARQYVR++++SVQ+VA+AL+PS  +     R 
Sbjct: 660 SPGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRNVVASVQQVAMALAPSRGAPPP--RQ 717

Query: 663 PLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFT 722
               P+AL+L R +  SYR ++G+DL++  +   E++ K  WHHTDA++CC+LK +P F 
Sbjct: 718 VPSNPDALSLVRHVLSSYRFHMGIDLIRPENGSDEALFKAFWHHTDAIVCCALKGIPEFV 777

Query: 723 FANQAGLDMLET-TLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMG 781
           FAN++GL+M ET T  +L+D+  EK  +++ RK  +A F  ++QQG+  L  G+ +SS G
Sbjct: 778 FANRSGLEMFETATASSLKDLDWEKTLNENDRKLSYATFTHVLQQGYCSLPAGVRMSSTG 837

Query: 782 RPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
           R  +YE+A+AWKVLN+ E   CI F+FINWS 
Sbjct: 838 RTATYEQALAWKVLNDSEAVECIAFLFINWSL 869


>gi|89514849|gb|ABD75299.1| class III homeodomain-leucine zipper protein HB10 [Physcomitrella
           patens]
 gi|110349520|gb|ABG73235.1| class III HD-Zip protein HB10 [Physcomitrella patens]
          Length = 880

 Score =  924 bits (2388), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/872 (54%), Positives = 608/872 (69%), Gaps = 79/872 (9%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+YHECPKPSSIRR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 13  SGKYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 72

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHT------------- 121
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQ               
Sbjct: 73  QRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFPDGRHRLP 132

Query: 122 ------------------QSTT-------------LATKDTSCESVVTSG-QHHLTPQHP 149
                             +S+T             +A+ DTSC+S VT G  H LTPQH 
Sbjct: 133 SQILQSPLKKEGAVNGGDESSTQGGICVKVHGQAGIASTDTSCDSAVTGGLPHRLTPQHS 192

Query: 150 PRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARA 209
           PRD+SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD++GI+AISHGC G+AARA
Sbjct: 193 PRDSSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARA 252

Query: 210 CGLVGLEPTRVAEILKDRPR------------------GSAI------LYALTTLAPARD 245
           CGLV L+ ++V E+LKDRPR                  G  I      +YA TTLAPARD
Sbjct: 253 CGLVALDISKVTEVLKDRPRWLQDCRRMEILGALPTGNGGTIELLYTQMYAPTTLAPARD 312

Query: 246 FWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIH 305
           +  LRYT++LEDG++V+CERSL  +Q GPTMPPVQ FVR EM PSGYLIRPC+GGG IIH
Sbjct: 313 YCTLRYTTILEDGNVVICERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCDGGGCIIH 372

Query: 306 IVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAAL 365
           +VDH + EPWSVPEVLRPLYES  VL+QK+T+AALR LR++A E +   V   G+ PA L
Sbjct: 373 VVDHYNNEPWSVPEVLRPLYESPAVLSQKSTLAALRHLRRLAAEESGEGVPRNGQHPAVL 432

Query: 366 RALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVS 425
           R L QRL++GFN AVNGF D+GW    +DG+DDV+V++N++P  + G  ++      ++ 
Sbjct: 433 RTLCQRLTKGFNNAVNGFPDDGWEATISDGLDDVSVMLNATPKSMEG-QIASDKLLYSLG 491

Query: 426 NAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFG 485
             +LCAKASMLLQNVP ++L+RFLREHRSEWAD +ID   A+    G   +P  R G   
Sbjct: 492 GGILCAKASMLLQNVPSSLLIRFLREHRSEWADYDIDANVASFRSNGNGYVP--RCGGVS 549

Query: 486 S-QVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELI 544
             Q+ LPLA++ E  E +EV+K+EG   S +  ++ RD FLLQLCSG+DE+AVG CA+L+
Sbjct: 550 HVQLPLPLAYSGESGEILEVVKVEG-HSSVQHMVLSRDTFLLQLCSGVDESAVGACAQLV 608

Query: 545 FAPIDASFADDAPLLPSGFRIIPLDSG-KETSSPNRTLDLASALEIGPAGNRATNNYSTN 603
           FAP+D + ADD PLLPSGF + P+D+   +    +RTLDLAS LE G       +  S+N
Sbjct: 609 FAPVDVALADDIPLLPSGFCVSPIDTNVVDGFGLDRTLDLASTLEGGNDLRLNGDAKSSN 668

Query: 604 STC-MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRT 662
           S   MRSV+TIAF+FA+E H +E VA MARQYVR++++SVQ+VA+AL+PS  +     R 
Sbjct: 669 SPGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRNVVASVQQVAMALAPSRGAPPP--RQ 726

Query: 663 PLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFT 722
               P+AL+L R +  SYR ++G+DL++  +   E++ K  WHHTDA++CC+LK +P F 
Sbjct: 727 VPSNPDALSLVRHVLSSYRFHMGIDLIRPENGSDEALFKAFWHHTDAIVCCALKGIPEFV 786

Query: 723 FANQAGLDMLET-TLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMG 781
           FAN++GL+M ET T  +L+D+  EK  +++ RK  +A F  ++QQG+  L  G+ +SS G
Sbjct: 787 FANRSGLEMFETATASSLKDLDWEKTLNENDRKLSYATFTHVLQQGYCSLPAGVRMSSTG 846

Query: 782 RPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
           R  +YE+A+AWKVLN+ E   CI F+FINWS 
Sbjct: 847 RTATYEQALAWKVLNDSEAVECIAFLFINWSL 878


>gi|168828707|gb|ACA33840.1| class III HD-Zip transcription factor HDZ31 [Pinus pinaster]
          Length = 628

 Score =  923 bits (2385), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/629 (71%), Positives = 523/629 (83%), Gaps = 27/629 (4%)

Query: 153 ASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGL 212
           ASPAGLLSIAEETLTEFLSKA G AV+WVQMPGMKPGPDS+GIVAIS+ C+GVAARACGL
Sbjct: 1   ASPAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIGIVAISNTCNGVAARACGL 60

Query: 213 VGLEPTRVAEILKDRP------------------RGSAI------LYALTTLAPARDFWL 248
           VGL+PT+VAEILKDRP                   G  I       YA TTLA ARDFW 
Sbjct: 61  VGLDPTKVAEILKDRPSWLRDCRCLDVLTAFPTGNGGTIELLYMQTYAATTLASARDFWT 120

Query: 249 LRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVD 308
           LRYT+VLEDGSLVVCERSL   Q GP++PPVQHFVRAEMLPSGYLI+PCEGGGSII IVD
Sbjct: 121 LRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFVRAEMLPSGYLIQPCEGGGSIIRIVD 180

Query: 309 HMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRAL 368
           HMDLEPWSVPEVLRPLYESSTVLAQK T+AALR+LRQ+AQE T   V GWGR+PA LR  
Sbjct: 181 HMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRRLRQIAQEATGEVVFGWGRQPAVLRTF 240

Query: 369 SQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAV 428
           SQRLSRGFNEAVNGFTD+GW++MG+DG++DVT+ +NSSP+K     ++ +NG   +   +
Sbjct: 241 SQRLSRGFNEAVNGFTDDGWSLMGSDGVEDVTIAINSSPNKHFAYQVNASNGLTTLGGGI 300

Query: 429 LCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQ 487
           LCAKASMLLQNVPPA+L+RFLREHRSEWAD+NID YSAAA+K  P S+PGSR G F GSQ
Sbjct: 301 LCAKASMLLQNVPPALLVRFLREHRSEWADSNIDAYSAAALKSSPYSVPGSRAGGFSGSQ 360

Query: 488 VILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAP 547
           VILPLAHT+EHEEF+EVIKLEG G + E+A++ RDMFLLQLCSG+DE+A G CAEL+FAP
Sbjct: 361 VILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSRDMFLLQLCSGIDEHAAGACAELVFAP 420

Query: 548 IDASFADDAPLLPSGFRIIPLDSGKETS-SPNRTLDLASALEIGPAGNRATNNYSTNSTC 606
           ID SFADDAPLLPSGFR+IPL+S  + S  PNRTLDLASALE+G  G R + +  TNS  
Sbjct: 421 IDESFADDAPLLPSGFRVIPLESRTDGSGGPNRTLDLASALEVGSTGTRTSGDSGTNSN- 479

Query: 607 MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGT 666
           +RSV+TIAF+F +ESH +E+VA MARQYVRS+++SVQRVA+AL+PS ++S  G R P GT
Sbjct: 480 LRSVLTIAFQFTYESHSRENVAAMARQYVRSVVASVQRVAMALAPSRLNSHVGPRPPPGT 539

Query: 667 PEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQ 726
           PEALTLARWIC SYR ++GVDL ++  E SES+LK LWHH+DA+MCCS+KALPVFTFANQ
Sbjct: 540 PEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKALPVFTFANQ 599

Query: 727 AGLDMLETTLVALQDITLEKIFDDHGRKA 755
           AGLDMLETTLVALQDI+L+KI D++GRK+
Sbjct: 600 AGLDMLETTLVALQDISLDKILDENGRKS 628


>gi|7209912|dbj|BAA92366.1| homeobox protein PpHB10 [Physcomitrella patens]
          Length = 880

 Score =  921 bits (2380), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/872 (54%), Positives = 607/872 (69%), Gaps = 79/872 (9%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+YHECPKPSSIRR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 13  SGKYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 72

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHT------------- 121
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQ               
Sbjct: 73  QRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFPDGRHRLP 132

Query: 122 ------------------QSTT-------------LATKDTSCESVVTSG-QHHLTPQHP 149
                             +S+T             +A+ DTSC+S VT G  H LTPQH 
Sbjct: 133 SQILQSPLKKEGAVNGGDESSTQGGICVKVHGQAGIASTDTSCDSAVTGGLPHRLTPQHS 192

Query: 150 PRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARA 209
           PRD+SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD++GI+AISHGC G+AARA
Sbjct: 193 PRDSSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARA 252

Query: 210 CGLVGLEPTRVAEILKDRPR------------------GSAI------LYALTTLAPARD 245
           CGLV L+ ++V E+LKDRPR                  G  I      +YA TTLAPARD
Sbjct: 253 CGLVALDISKVTEVLKDRPRWLQDCRRMEILGALPTGNGGTIELLYTQMYAPTTLAPARD 312

Query: 246 FWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIH 305
           +  LRYT++LEDG++V+CERSL  +Q GPTMPPVQ FVR EM PSGYLIRPC+GGG IIH
Sbjct: 313 YCTLRYTTILEDGNVVICERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCDGGGCIIH 372

Query: 306 IVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAAL 365
           +VDH + EP SVPEVLRPLYES  VL+QK+T+AALR LR++A E +   V   G+ PA L
Sbjct: 373 VVDHYNNEPRSVPEVLRPLYESPAVLSQKSTLAALRHLRRLAAEESGEGVPRNGQHPAVL 432

Query: 366 RALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVS 425
           R L QRL++GFN AVNGF D+GW    +DG+DDV+V++N++P  + G  ++      ++ 
Sbjct: 433 RTLCQRLTKGFNNAVNGFPDDGWEATISDGLDDVSVMLNATPKSMEG-QIASDKLLYSLG 491

Query: 426 NAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFG 485
             +LCAKASMLLQNVPP++L+RFLREHRSEWAD +ID   A+    G   +P  R G   
Sbjct: 492 GGILCAKASMLLQNVPPSLLIRFLREHRSEWADYDIDANVASFRSNGNGYVP--RCGGVS 549

Query: 486 S-QVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELI 544
             Q+ LPLA++ E  E +EV+K+EG   S +  ++ RD FLLQLCSG+DE+AVG CA+L+
Sbjct: 550 HVQLPLPLAYSGESGEILEVVKVEG-HSSVQHMVLSRDTFLLQLCSGVDESAVGACAQLV 608

Query: 545 FAPIDASFADDAPLLPSGFRIIPLDSG-KETSSPNRTLDLASALEIGPAGNRATNNYSTN 603
           FAP+D + ADD PLLP GF + P+D+   +    +RTLDLAS LE G       +  S+N
Sbjct: 609 FAPVDVALADDIPLLPPGFCVSPIDTNVVDGFGLDRTLDLASTLEGGNDLRSNGDAKSSN 668

Query: 604 STC-MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRT 662
           S   MRSV+TIAF+FA+E H +E VA MARQYVR++++SVQ+VA+AL+PS  +     R 
Sbjct: 669 SPGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRNVVASVQQVAMALAPSRGAPPP--RQ 726

Query: 663 PLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFT 722
               P+AL+L R +  SYR ++G+DL++  +   E++ K  WHHTDA++CC+LK +P F 
Sbjct: 727 VPSNPDALSLVRHVLSSYRFHMGIDLIRPENGSDEALFKAFWHHTDAIVCCALKGIPEFV 786

Query: 723 FANQAGLDMLET-TLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMG 781
           FAN++GL+M ET T  +L+D+  EK  +++ RK  +A F  ++QQG+  L  G+ +SS G
Sbjct: 787 FANRSGLEMFETATASSLKDLDWEKTLNENDRKLSYATFTHVLQQGYCSLPAGVRMSSTG 846

Query: 782 RPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
           R  +YE+A+AWKVLN+ E   CI F+FINWS 
Sbjct: 847 RTATYEQALAWKVLNDSEAVECIAFLFINWSL 878


>gi|110349526|gb|ABG73238.1| class III HD-Zip protein HB13 [Physcomitrella patens]
          Length = 877

 Score =  918 bits (2373), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/869 (54%), Positives = 594/869 (68%), Gaps = 74/869 (8%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+YHECPKPSSIRR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 13  SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 72

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTL-------- 126
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQ   S  L        
Sbjct: 73  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLENHSLRQQLPSLPLTNGTHRLS 132

Query: 127 ---------------------------------ATKDTSCESVVTSG-QHHLTPQHPPRD 152
                                            A+ DTSC+S VT G  HHLTP+H PR 
Sbjct: 133 SQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSCDSAVTGGLPHHLTPRHSPRY 192

Query: 153 ASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGL 212
            SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD++GI+AISHGC G+AARACGL
Sbjct: 193 TSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGL 252

Query: 213 VGLEPTRVAEILKDRP-------------------RGSAIL-----YALTTLAPARDFWL 248
           V L+  +V E+LKDRP                   RG+  L     YA TTLAPARD+  
Sbjct: 253 VALDAGKVTEVLKDRPAWLEDCRRMEVLGALPTGNRGTIELLYTQMYASTTLAPARDYCT 312

Query: 249 LRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVD 308
           LRYT++LEDG+LV+CERSL   QNGP+MPPVQ FVR EM PSGYLIRPC+GGG IIH+VD
Sbjct: 313 LRYTTILEDGNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCIIHVVD 372

Query: 309 HMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRAL 368
           H D  PWSVPEVLRPLYES  VLAQ++T+AALR LR++A E +       G+ PA LR L
Sbjct: 373 HYDNGPWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLAAEESGEGNPRNGQHPAVLRTL 432

Query: 369 SQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAV 428
            QRL++GF  AVNGF D+GW    +DG+DDV+V++N++   + G  ++      ++   +
Sbjct: 433 GQRLAKGFKNAVNGFADDGWVSTVSDGLDDVSVILNATSQSMEG-QIASDKLLYSLGGGI 491

Query: 429 LCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQV 488
           LCAKASMLLQNVPP+IL++FLREHRSEWAD ++D   A + +           G    Q+
Sbjct: 492 LCAKASMLLQNVPPSILIKFLREHRSEWADYDMDANLATSFRSNGNGYAPQGGGVSHVQL 551

Query: 489 ILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPI 548
            LPL ++ EH E +EV+KLE    S +  ++ RD FLLQLCSG+DENAVG  A+LIFAP+
Sbjct: 552 PLPLPNSGEHGEILEVVKLED-HSSVQHMVISRDSFLLQLCSGIDENAVGASAQLIFAPV 610

Query: 549 DASFADDAPLLPSGFRIIPLDSGK-ETSSPNRTLDLASALEIGPAGNRATNNYSTNSTC- 606
           D +  +D PLLPSGF I P+D+   +    + TLDLAS LE G +  R   +  +N T  
Sbjct: 611 DVALTEDIPLLPSGFCISPVDANVLDEFDLDHTLDLASTLE-GGSDLRLNGDSKSNGTSS 669

Query: 607 -MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLG 665
            MRSV+TIAF+FA+E H  E  A MARQY+R+++SSVQRVA+AL+PS  S  A  R    
Sbjct: 670 HMRSVLTIAFQFAYEVHSHEACAVMARQYLRTVVSSVQRVAMALAPSRGS--APPRQMSA 727

Query: 666 TPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFAN 725
            P+AL+LAR +  SYR +LG+DL +S + G E++ K  WHHTDA++CC+ K  P F FAN
Sbjct: 728 NPDALSLARHVLRSYRLHLGLDLTRSENGGDETLFKAFWHHTDAILCCAWKGKPEFVFAN 787

Query: 726 QAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVS 785
           ++GL+M ETT  +LQ++  +K  ++   K  +A F Q++QQG+  L  G+ +SS GR  +
Sbjct: 788 RSGLEMFETTTSSLQELDWDKTLNESDCKLSYATFTQVLQQGYCSLPAGVRMSSSGRTAT 847

Query: 786 YERAVAWKVLNEEETAHCICFMFINWSFV 814
           YERA+ WKV+++ ET  CI F+FINWSFV
Sbjct: 848 YERALVWKVVDDNETVECIAFLFINWSFV 876


>gi|90110440|gb|ABD90522.1| class III homeodomain-leucine zipper [Physcomitrella patens]
          Length = 868

 Score =  917 bits (2371), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/869 (54%), Positives = 594/869 (68%), Gaps = 74/869 (8%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+YHECPKPSSIRR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 63

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTL-------- 126
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQ   S  L        
Sbjct: 64  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLENHSLRQQLPSLPLTNGTHRLS 123

Query: 127 ---------------------------------ATKDTSCESVVTSG-QHHLTPQHPPRD 152
                                            A+ DTSC+S VT G  HHLTP+H PR 
Sbjct: 124 SQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSCDSAVTGGLPHHLTPRHSPRY 183

Query: 153 ASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGL 212
            SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD++GI+AISHGC G+AARACGL
Sbjct: 184 TSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGL 243

Query: 213 VGLEPTRVAEILKDRP-------------------RGSAIL-----YALTTLAPARDFWL 248
           V L+  +V E+LKDRP                   RG+  L     YA TTLAPARD+  
Sbjct: 244 VALDAGKVTEVLKDRPAWLEDCRRMEVLGALPTGNRGTIELLYTQMYASTTLAPARDYCT 303

Query: 249 LRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVD 308
           LRYT++LEDG+LV+CERSL   QNGP+MPPVQ FVR EM PSGYLIRPC+GGG IIH+VD
Sbjct: 304 LRYTTILEDGNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCIIHVVD 363

Query: 309 HMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRAL 368
           H D  PWSVPEVLRPLYES  VLAQ++T+AALR LR++A E +       G+ PA LR L
Sbjct: 364 HYDNGPWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLAAEESGEGNPRNGQHPAVLRTL 423

Query: 369 SQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAV 428
            QRL++GF  AVNGF D+GW    +DG+DDV+V++N++   + G  ++      ++   +
Sbjct: 424 GQRLAKGFKNAVNGFADDGWVSTVSDGLDDVSVILNATSQSMEG-QIASDKLLYSLGGGI 482

Query: 429 LCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQV 488
           LCAKASMLLQNVPP+IL++FLREHRSEWAD ++D   A + +           G    Q+
Sbjct: 483 LCAKASMLLQNVPPSILIKFLREHRSEWADYDMDANLATSFRSNGNGYAPQGGGVSHVQL 542

Query: 489 ILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPI 548
            LPL ++ EH E +EV+KLE    S +  ++ RD FLLQLCSG+DENAVG  A+LIFAP+
Sbjct: 543 PLPLPNSGEHGEILEVVKLED-HSSVQHMVISRDSFLLQLCSGIDENAVGASAQLIFAPV 601

Query: 549 DASFADDAPLLPSGFRIIPLDSGK-ETSSPNRTLDLASALEIGPAGNRATNNYSTNSTC- 606
           D +  +D PLLPSGF I P+D+   +    + TLDLAS LE G +  R   +  +N T  
Sbjct: 602 DVALTEDIPLLPSGFCISPVDANVLDEFDLDHTLDLASTLE-GGSDLRLNGDSKSNGTSS 660

Query: 607 -MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLG 665
            MRSV+TIAF+FA+E H  E  A MARQY+R+++SSVQRVA+AL+PS  S  A  R    
Sbjct: 661 HMRSVLTIAFQFAYEVHSHEACAVMARQYLRTVVSSVQRVAMALAPSRGS--APPRQMSA 718

Query: 666 TPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFAN 725
            P+AL+LAR +  SYR +LG+DL +S + G E++ K  WHHTDA++CC+ K  P F FAN
Sbjct: 719 NPDALSLARHVLRSYRLHLGLDLTRSENGGDETLFKAFWHHTDAILCCAWKGKPEFVFAN 778

Query: 726 QAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVS 785
           ++GL+M ETT  +LQ++  +K  ++   K  +A F Q++QQG+  L  G+ +SS GR  +
Sbjct: 779 RSGLEMFETTTSSLQELDWDKTLNESDCKLSYATFTQVLQQGYCSLPAGVRMSSSGRTAT 838

Query: 786 YERAVAWKVLNEEETAHCICFMFINWSFV 814
           YERA+ WKV+++ ET  CI F+FINWSFV
Sbjct: 839 YERALVWKVVDDNETVECIAFLFINWSFV 867


>gi|89514847|gb|ABD75298.1| class III homeodomain-leucine zipper protein C3HDZ2 [Physcomitrella
           patens]
          Length = 876

 Score =  916 bits (2368), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/869 (54%), Positives = 593/869 (68%), Gaps = 74/869 (8%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+YHECPKPSSIRR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 12  SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 71

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTL-------- 126
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQ   S  L        
Sbjct: 72  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLENHSLRQQLPSLPLTNGTHRLS 131

Query: 127 ---------------------------------ATKDTSCESVVTSG-QHHLTPQHPPRD 152
                                            A+ DTSC+S VT G  HHLTP+H PR 
Sbjct: 132 SQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSCDSAVTGGLPHHLTPRHSPRY 191

Query: 153 ASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGL 212
            SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD++GI+AISHGC G+AARACGL
Sbjct: 192 TSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGL 251

Query: 213 VGLEPTRVAEILKDRP-------------------RGSAIL-----YALTTLAPARDFWL 248
           V L+  +V E+LKDRP                   RG+  L     YA TTLAPARD+  
Sbjct: 252 VALDAGKVTEVLKDRPAWLEDCRRMEVLGALPTGNRGTIELLYTQMYASTTLAPARDYCT 311

Query: 249 LRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVD 308
           LRYT++LEDG+LV+CERSL   QNGP+MPPVQ FVR EM PSGYLIRPC+GGG IIH+VD
Sbjct: 312 LRYTTILEDGNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCIIHVVD 371

Query: 309 HMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRAL 368
           H D  PWSVPEVLRPLYES  VLAQ++T+AALR LR++A E +       G+ PA LR L
Sbjct: 372 HYDNGPWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLAAEESGEGNPRNGQHPAVLRTL 431

Query: 369 SQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAV 428
            QRL++GF  AVNGF D+GW    +DG+DDV+V++N++   + G  ++      ++   +
Sbjct: 432 GQRLAKGFKNAVNGFADDGWVSTVSDGLDDVSVILNATSQSMEG-QIASDKLLYSLGGGI 490

Query: 429 LCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQV 488
           LCAKASMLLQNVPP+IL++FLREHRSEWAD ++D   A + +           G    Q+
Sbjct: 491 LCAKASMLLQNVPPSILIKFLREHRSEWADYDMDANLATSFRSNGNGYAPQGGGVSHVQL 550

Query: 489 ILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPI 548
            LPL ++ EH E +EV+KLE    S +  ++ RD FLLQLCSG+DENAVG  A+LIFAP+
Sbjct: 551 PLPLPNSGEHGEILEVVKLED-HSSVQHMVISRDSFLLQLCSGIDENAVGASAQLIFAPV 609

Query: 549 DASFADDAPLLPSGFRIIPLDSGK-ETSSPNRTLDLASALEIGPAGNRATNNYSTNSTC- 606
           D +  +D PLLPSGF I P+D+   +    + TLDLAS LE G +  R   +  +N T  
Sbjct: 610 DVALTEDIPLLPSGFCISPVDANVLDEFDLDHTLDLASTLE-GGSDLRLNGDSKSNGTSS 668

Query: 607 -MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLG 665
            MRSV+TIAF+FA+E H  E  A MARQY+R+++SSVQRVA+AL+PS  S  A  R    
Sbjct: 669 HMRSVLTIAFQFAYEVHSHEACAVMARQYLRTVVSSVQRVAMALAPSRGS--APPRQMSA 726

Query: 666 TPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFAN 725
            P+AL+LAR +  SYR +LG+DL  S + G E++ K  WHHTDA++CC+ K  P F FAN
Sbjct: 727 NPDALSLARHVLRSYRLHLGLDLTGSENGGDETLFKAFWHHTDAILCCAWKGKPEFVFAN 786

Query: 726 QAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVS 785
           ++GL+M ETT  +LQ++  +K  ++   K  +A F Q++QQG+  L  G+ +SS GR  +
Sbjct: 787 RSGLEMFETTTSSLQELDWDKTLNESDCKLSYATFTQVLQQGYCSLPAGVRMSSSGRTAT 846

Query: 786 YERAVAWKVLNEEETAHCICFMFINWSFV 814
           YERA+ WKV+++ ET  CI F+FINWSFV
Sbjct: 847 YERALVWKVVDDNETVECIAFLFINWSFV 875


>gi|168023519|ref|XP_001764285.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684437|gb|EDQ70839.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  916 bits (2368), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/872 (53%), Positives = 594/872 (68%), Gaps = 77/872 (8%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+YHECPKPSSIRR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 63

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTL-------- 126
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQ   S  L        
Sbjct: 64  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLENHSLRQQLPSLPLTNGTHRLS 123

Query: 127 ------------------------------------ATKDTSCESVVTSG-QHHLTPQHP 149
                                               A+ DTSC+S VT G  HHLTP+H 
Sbjct: 124 SQVLQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSCDSAVTGGLPHHLTPRHS 183

Query: 150 PRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARA 209
           PR  SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD++GI+AISHGC G+AARA
Sbjct: 184 PRYTSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARA 243

Query: 210 CGLVGLEPTRVAEILKDRP-------------------RGSAIL-----YALTTLAPARD 245
           CGLV L+  +V E+LKDRP                   RG+  L     YA TTLAPARD
Sbjct: 244 CGLVALDAGKVTEVLKDRPAWLEDCRRMEVLGALPTGNRGTIELLYTQMYASTTLAPARD 303

Query: 246 FWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIH 305
           +  LRYT++LEDG+LV+CERSL   QNGP+MPPVQ FVR EM PSGYLIRPC+GGG IIH
Sbjct: 304 YCTLRYTTILEDGNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCIIH 363

Query: 306 IVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAAL 365
           +VDH D  PWSVPEVLRPLYES  VLAQ++T+AALR LR++A E +       G+ PA L
Sbjct: 364 VVDHYDNGPWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLAAEESGEGNPRNGQHPAVL 423

Query: 366 RALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVS 425
           R L QRL++GF  AVNGF D+GW    +DG+DDV+V++N++   + G  ++      ++ 
Sbjct: 424 RTLGQRLAKGFKNAVNGFADDGWVSTVSDGLDDVSVILNATSQSMEG-QIASDKLLYSLG 482

Query: 426 NAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFG 485
             +LCAKASMLLQNVPP+IL++FLREHRSEWAD ++D   A + +           G   
Sbjct: 483 GGILCAKASMLLQNVPPSILIKFLREHRSEWADYDMDANLATSFRSNGNGYAPQGGGVSH 542

Query: 486 SQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIF 545
            Q+ LPL ++ EH E +EV+KLE    S +  ++ RD FLLQLCSG+DENAVG  A+LIF
Sbjct: 543 VQLPLPLPNSGEHGEILEVVKLED-HSSVQHMVISRDSFLLQLCSGIDENAVGASAQLIF 601

Query: 546 APIDASFADDAPLLPSGFRIIPLDSGK-ETSSPNRTLDLASALEIGPAGNRATNNYSTNS 604
           AP+D +  +D PLLPSGF I P+D+   +    + TLDLAS LE G +  R   +  +N 
Sbjct: 602 APVDVALTEDIPLLPSGFCISPVDANVLDEFDLDHTLDLASTLE-GGSDLRLNGDSKSNG 660

Query: 605 TC--MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRT 662
           T   MRSV+TIAF+FA+E H  E  A MARQY+R+++SSVQRVA+AL+PS  S  A  R 
Sbjct: 661 TSSHMRSVLTIAFQFAYEVHSHEACAVMARQYLRTVVSSVQRVAMALAPSRGS--APPRQ 718

Query: 663 PLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFT 722
               P+AL+LAR +  SYR +LG+DL +S + G E++ K  WHHTDA++CC+ K  P F 
Sbjct: 719 MSANPDALSLARHVLRSYRLHLGLDLTRSENGGDETLFKAFWHHTDAILCCAWKGKPEFV 778

Query: 723 FANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGR 782
           FAN++GL+M ETT  +LQ++  +K  ++   K  +A F Q++QQG+  L  G+ +SS GR
Sbjct: 779 FANRSGLEMFETTTSSLQELDWDKTLNESDCKLSYATFTQVLQQGYCSLPAGVRMSSSGR 838

Query: 783 PVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
             +YERA+ WKV+++ ET  CI F+FINWSFV
Sbjct: 839 TATYERALVWKVVDDNETVECIAFLFINWSFV 870


>gi|168045580|ref|XP_001775255.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673468|gb|EDQ59991.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 870

 Score =  914 bits (2362), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/875 (53%), Positives = 600/875 (68%), Gaps = 84/875 (9%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+YHECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTNEQVEALERVYHECPKPSSVRRHQLIKESPILANIEPKQIKVWFQNRRCREK 63

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHT------------- 121
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQ               
Sbjct: 64  QRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFPDGRHRLP 123

Query: 122 -------------------QSTT-------------LATKDTSCESVVTSG-QHHLTPQH 148
                              +S+T             +A+ DTSC+S VT G  H +TPQH
Sbjct: 124 SHVNLQSPLKIEGAVNGGDESSTQGGICVKLPGQAGVASTDTSCDSAVTGGLPHRVTPQH 183

Query: 149 PPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAAR 208
            PRD SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD++GI+AISHGC G+AAR
Sbjct: 184 SPRDTSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAAR 243

Query: 209 ACGLVGLEPTRVAEILKDRP------------------RGSAI------LYALTTLAPAR 244
           ACGLV L+ ++V E+LKDRP                   G  I      +YA TTLAPAR
Sbjct: 244 ACGLVALDASKVTEVLKDRPAWLQDCRRMEVLGALSTANGGTIELLYTQMYAPTTLAPAR 303

Query: 245 DFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSII 304
           D+  LRYT++LEDG+LV+CERSL   Q G TMPPVQ FVR EM  SGYLIRPCEGGG II
Sbjct: 304 DYCTLRYTTILEDGNLVICERSLTGGQGGHTMPPVQSFVRGEMYSSGYLIRPCEGGGCII 363

Query: 305 HIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAA 364
           H+VDH D EPW VPEVLRPLYES  VLAQK+T+ ALR LR++A E +   V   G  PA 
Sbjct: 364 HVVDHYDKEPWRVPEVLRPLYESPAVLAQKSTIGALRHLRRLAAEESGEGVPRNGHHPAV 423

Query: 365 LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAV 424
           LR L QRL++GFN+AVNGF D+GW     DG+DDV+V+VN++P  + G  ++      ++
Sbjct: 424 LRILGQRLTKGFNDAVNGFGDDGWETTVTDGLDDVSVMVNATPKSMEG-QIASDKLLYSL 482

Query: 425 SNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF 484
              +LCAKASMLLQNVPP++L+RFLREHRSEWAD ++D    A+ +           G  
Sbjct: 483 GGGILCAKASMLLQNVPPSLLIRFLREHRSEWADYDMD--DMASFRSNGNGYVPRGGGVS 540

Query: 485 GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELI 544
             Q+ LPLA + E  E +EV+KLEG   S +  ++ RD+FLLQLCSG+DE+A+G C++LI
Sbjct: 541 HVQLPLPLAQSGECGEILEVVKLEG-HSSVQHMVLSRDIFLLQLCSGIDESALGACSQLI 599

Query: 545 FAPIDASFADDAPLLPSGFRIIPLDSG-KETSSPNRTLDLASALEIGPAGN--RATNNYS 601
           FAP+D + AD  PLLPSGF + P+D+   +    +RTLDLAS LE    GN  R   +  
Sbjct: 600 FAPVDVALADGIPLLPSGFCVSPIDTNVVDGFGLDRTLDLASTLE---GGNDLRLNGDVK 656

Query: 602 TNSTC--MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAG 659
           +NS+   MRSV+TIAF+FA+E H +E VA MARQYVR++++SVQRVA+AL+PS     A 
Sbjct: 657 SNSSSGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRTVVASVQRVAMALAPSR--GAAP 714

Query: 660 LRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALP 719
            R     P+AL+LA  +  SYR +LG+DL++  +   E++ K  WHHTDA++CC+ K +P
Sbjct: 715 PRQAPSNPDALSLACHVLSSYRFHLGIDLVRPENGSDEALFKAFWHHTDAIVCCAWKGMP 774

Query: 720 VFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSS 779
            F FAN++GL+M ET   +LQ++  EK  +++ RK  +A F Q++QQG+  L  G+ +SS
Sbjct: 775 EFVFANRSGLEMFETATSSLQNLNWEKTLNENDRKLSYATFTQVLQQGYCSLPAGVRMSS 834

Query: 780 MGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            GR V+YE+A+AWKVL++ +   CI F+FINWS V
Sbjct: 835 TGRTVTYEQALAWKVLDDTKAVECIAFLFINWSLV 869


>gi|110349528|gb|ABG73239.1| class III HD-Zip protein HB14 [Physcomitrella patens]
          Length = 875

 Score =  914 bits (2361), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/871 (53%), Positives = 599/871 (68%), Gaps = 80/871 (9%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+YHECPKPSS+RR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 13  SGKYVRYTNEQVEALERVYHECPKPSSVRRHQLIKESPILANIEPKQIKVWFQNRRCREK 72

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHT------------- 121
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQ               
Sbjct: 73  QRKEATRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQIPNLPFPDGRHRLP 132

Query: 122 ---------------QSTT-------------LATKDTSCESVVTSG-QHHLTPQHPPRD 152
                          +S+T             +A+ DTSC+S VT G  H +TPQH PRD
Sbjct: 133 SHSPLKIEGAVNGGDESSTQGGICVKLPGQAGVASTDTSCDSAVTGGLPHRVTPQHSPRD 192

Query: 153 ASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGL 212
            SPAGLL+ AEETLTEFL+KATGTAV+W+Q+PGMKPGPD++GI+AISHGC G+AARACGL
Sbjct: 193 TSPAGLLATAEETLTEFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGL 252

Query: 213 VGLEPTRVAEILKDRP------------------RGSAI------LYALTTLAPARDFWL 248
           V L+ ++V E+LKDRP                   G  I      +YA TTLAPARD+  
Sbjct: 253 VALDASKVTEVLKDRPAWLQDCRRMEVLGALSTANGGTIELLYTQMYAPTTLAPARDYCT 312

Query: 249 LRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVD 308
           LRYT++LEDG+LV+CERSL   Q G TMPPVQ FVR EM  SGYLIRPCEGGG IIH+VD
Sbjct: 313 LRYTTILEDGNLVICERSLTGGQGGHTMPPVQSFVRGEMYSSGYLIRPCEGGGCIIHVVD 372

Query: 309 HMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRAL 368
           H D EPW VPEVLRPLYES  VLAQK+T+ ALR LR++A E +   V   G  PA LR L
Sbjct: 373 HYDKEPWRVPEVLRPLYESPAVLAQKSTIGALRHLRRLAAEESGEGVPRNGHHPAVLRIL 432

Query: 369 SQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAV 428
            QRL++GFN+AVNGF D+GW     DG+DDV+V+VN++P  + G  ++      ++   +
Sbjct: 433 GQRLTKGFNDAVNGFGDDGWETTVTDGLDDVSVMVNATPKSMEG-QIASDKLLYSLGGGI 491

Query: 429 LCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQV 488
           LCAKASMLLQNVPP++L+RFLREHRSEWAD ++D    A+ +           G    Q+
Sbjct: 492 LCAKASMLLQNVPPSLLIRFLREHRSEWADYDMD--DMASFRSNGNGYVPRGGGVSHVQL 549

Query: 489 ILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPI 548
            LPLA + E  E +EV+KLEG   S +  ++ RD+FLLQLCSG+DE+A+G C++LIFAP+
Sbjct: 550 PLPLAQSGECGEILEVVKLEG-HSSVQHMVLSRDIFLLQLCSGIDESALGACSQLIFAPV 608

Query: 549 DASFADDAPLLPSGFRIIPLDSG-KETSSPNRTLDLASALEIGPAGN--RATNNYSTNST 605
           D + AD  PLLPSGF + P+D+   +    +RTLDLAS LE    GN  R   +  +NS+
Sbjct: 609 DVALADGIPLLPSGFCVSPIDTNVVDGFGLDRTLDLASTLE---GGNDLRLNGDVKSNSS 665

Query: 606 C--MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTP 663
              MRSV+TIAF+FA+E H +E VA MARQYVR++++SVQRVA+AL+PS     A  R  
Sbjct: 666 SGQMRSVLTIAFQFAYEVHTRETVAAMARQYVRTVVASVQRVAMALAPSR--GAAPPRQA 723

Query: 664 LGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTF 723
              P+AL+LA  +  SYR +LG+DL++  +   E++ K  WHHTDA++CC+ K +P F F
Sbjct: 724 PSNPDALSLACHVLSSYRFHLGIDLVRPENGSDEALFKAFWHHTDAIVCCAWKGMPEFVF 783

Query: 724 ANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRP 783
           AN+ GL+M ET   +LQ++  EK  +++ RK  +A F Q++QQG+  L  G+ +SS GR 
Sbjct: 784 ANRPGLEMFETATSSLQNLNWEKTLNENDRKLSYATFTQVLQQGYCSLPAGVRMSSTGRT 843

Query: 784 VSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           V+YE+A+AWKVL++ +   CI F+FINWS V
Sbjct: 844 VTYEQALAWKVLDDTKAVECIAFLFINWSLV 874


>gi|110349522|gb|ABG73236.1| class III HD-Zip protein HB11 [Physcomitrella patens]
          Length = 880

 Score =  912 bits (2357), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/869 (53%), Positives = 597/869 (68%), Gaps = 75/869 (8%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+YHECPKPSSIRR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 17  SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 76

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH-------------- 120
           QRKEASRL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQ               
Sbjct: 77  QRKEASRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQLPGLPLTDGRHRLS 136

Query: 121 --------------TQSTT-------------LATKDTSCESVVTSG-QHHLTPQHPPRD 152
                          +S+T             +A+ DTSC+S VT G  H LTPQH PRD
Sbjct: 137 SQNALKKEGAVNGGDESSTQGGICVRIHGQAGVASTDTSCDSAVTGGLPHRLTPQHSPRD 196

Query: 153 ASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGL 212
            SPAGLL+IAEETLT+FL+KATGTAV+W+Q+PGMKPGPD++GI+AISHGC G+AARACGL
Sbjct: 197 TSPAGLLAIAEETLTDFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIAARACGL 256

Query: 213 VGLEPTRVAEILKDRP------------------RGSAI------LYALTTLAPARDFWL 248
           V L+ ++V E+LKDRP                   G  I      +YA TTLA ARD+  
Sbjct: 257 VALDASKVTEVLKDRPAWQQDCRRMEVLGVLPTANGGTIELLYTQMYAPTTLASARDYCT 316

Query: 249 LRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVD 308
           LRYT++LEDG+LV+CERSL   QNGP MPPVQ FVR EM PSGYLIRP +GGG IIH+VD
Sbjct: 317 LRYTTILEDGNLVICERSLIGGQNGPPMPPVQSFVRGEMFPSGYLIRPSDGGGCIIHVVD 376

Query: 309 HMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRAL 368
           H D E WSVPEVLRPLYES  VLAQ++T+AALR LR++A E +       G+ P  LR L
Sbjct: 377 HYDNERWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLASEESGEGNPRNGQHPVVLRTL 436

Query: 369 SQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAV 428
           SQRL++GF  AVNGF D+GW    +DG++DV+V++N++P  + G  ++      ++   +
Sbjct: 437 SQRLAKGFKNAVNGFGDDGWVSTVSDGLEDVSVMLNATPKSMEG-QIASDKLLYSLGGGI 495

Query: 429 LCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQV 488
           LCAKASMLLQNV P++L+ FLREHRSEWAD +ID   A + +    S      G    Q+
Sbjct: 496 LCAKASMLLQNVSPSLLIGFLREHRSEWADFDIDANVATSFRSNGNSYARGG-GVSHVQL 554

Query: 489 ILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPI 548
            LPLAH+ EH E +EV+KLEG   S +  ++ RD FLLQLCSG+DENAVG  A+LIFAP+
Sbjct: 555 PLPLAHSGEHGEILEVVKLEG-HSSVQHMVLSRDSFLLQLCSGIDENAVGASAQLIFAPV 613

Query: 549 DASFADDAPLLPSGFRIIPLDSGKETS-SPNRTLDLASALEIGPAGNRATNNYSTNSTC- 606
           D + A+D PLLPSGF + P+D+        +RTLDLAS LE G +  R   +  +N T  
Sbjct: 614 DVALAEDIPLLPSGFCVSPIDASVVGGFDLDRTLDLASTLE-GGSDLRLNGDTKSNGTSG 672

Query: 607 -MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLG 665
            MRSV+TIAF+FA+E H +E  A MARQYVR++++SVQRVA+AL+PS   + A LR    
Sbjct: 673 QMRSVLTIAFQFAYEVHTRETCAVMARQYVRTVVASVQRVAMALAPSR--APAPLRQAPS 730

Query: 666 TPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFAN 725
            P+A++L R +  SYR +L +DL +  + G E++ K  WHHTDA++CC+ K +P F FAN
Sbjct: 731 NPDAISLVRHVLSSYRLHLALDLTRPENRGDEALFKAFWHHTDAIVCCAWKGMPEFVFAN 790

Query: 726 QAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVS 785
           ++GL+M ETT  +LQD+  +K  +++  +  +  F Q++QQ +  L  G+ +SS GR  +
Sbjct: 791 RSGLEMFETTTSSLQDLDWDKTLNENECELSYTTFTQVLQQDYCSLPAGVRMSSTGRTTT 850

Query: 786 YERAVAWKVLNEEETAHCICFMFINWSFV 814
           YERA+AWKVL++ E   CI F+FINWSFV
Sbjct: 851 YERALAWKVLDDNEAVECIAFLFINWSFV 879


>gi|168020051|ref|XP_001762557.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686290|gb|EDQ72680.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 873

 Score =  911 bits (2354), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/875 (53%), Positives = 598/875 (68%), Gaps = 81/875 (9%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+YHECPKPSSIRR QLI+E PIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK 63

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH-------------- 120
           QRKEASRL +VN KLTA+NKLLMEEN+RL K  SQL  EN   RQ               
Sbjct: 64  QRKEASRLVSVNAKLTALNKLLMEENERLAKHTSQLTLENHALRQQLPGLPLTDGRHRLS 123

Query: 121 TQSTTL---------------------------------ATKDTSCESVVTSG-QHHLTP 146
           +Q+T++                                 A+ DTSC+S VT G  H LTP
Sbjct: 124 SQATSVLQNALKKEGAVNGGDESSTQGGICVRIHGQAGVASTDTSCDSAVTGGLPHRLTP 183

Query: 147 QHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVA 206
           QH PRD SPAGLL+IAEETLT+FL+KATGTAV+W+Q+PGMKPGPD++GI+AISHGC G+A
Sbjct: 184 QHSPRDTSPAGLLAIAEETLTDFLAKATGTAVDWIQLPGMKPGPDAIGIIAISHGCVGIA 243

Query: 207 ARACGLVGLEPTRVAEILKDRP------------------RGSAI------LYALTTLAP 242
           ARACGLV L+ ++V E+LKDRP                   G  I      +YA TTLA 
Sbjct: 244 ARACGLVALDASKVTEVLKDRPAWQQDCRRMEVLGVLPTANGGTIELLYTQMYAPTTLAS 303

Query: 243 ARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGS 302
           ARD+  LRYT++LEDG+LV+CERSL   QNGP MPPVQ FVR EM PSGYLIRP +GGG 
Sbjct: 304 ARDYCTLRYTTILEDGNLVICERSLIGGQNGPPMPPVQSFVRGEMFPSGYLIRPSDGGGC 363

Query: 303 IIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRP 362
           IIH+VDH D E WSVPEVLRPLYES  VLAQ++T+AALR LR++A E +       G+ P
Sbjct: 364 IIHVVDHYDNERWSVPEVLRPLYESPAVLAQRSTIAALRHLRRLASEESGEGNPRNGQHP 423

Query: 363 AALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFP 422
             LR LSQRL++GF  AVNGF D+GW    +DG++DV+V++N++P  + G  ++      
Sbjct: 424 VVLRTLSQRLAKGFKNAVNGFGDDGWVSTVSDGLEDVSVMLNATPKSMEG-QIASDKLLY 482

Query: 423 AVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVG 482
           ++   +LCAKASMLLQNV P++L+ FLREHRSEWAD +ID   A + +    S      G
Sbjct: 483 SLGGGILCAKASMLLQNVSPSLLIGFLREHRSEWADFDIDANVATSFRSNGNSYARGG-G 541

Query: 483 TFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAE 542
               Q+ LPLAH+ EH E +EV+KLEG   S +  ++ RD FLLQLCSG+DENAVG  A+
Sbjct: 542 VSHVQLPLPLAHSGEHGEILEVVKLEG-HSSVQHMVLSRDSFLLQLCSGIDENAVGASAQ 600

Query: 543 LIFAPIDASFADDAPLLPSGFRIIPLDSGKETS-SPNRTLDLASALEIGPAGNRATNNYS 601
           LIFAP+D + A+D PLLPSGF + P+D+        +RTLDLAS LE G +  R   +  
Sbjct: 601 LIFAPVDVALAEDIPLLPSGFCVSPIDASVVGGFDLDRTLDLASTLE-GGSDLRLNGDTK 659

Query: 602 TNSTC--MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAG 659
           +N T   MRSV+TIAF+FA+E H +E  A MARQYVR++++SVQRVA+AL+PS   + A 
Sbjct: 660 SNGTSGQMRSVLTIAFQFAYEVHTRETCAVMARQYVRTVVASVQRVAMALAPSR--APAP 717

Query: 660 LRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALP 719
           LR     P+A++L R +  SYR +L +DL +  + G E++ K  WHHTDA++CC+ K +P
Sbjct: 718 LRQAPSNPDAISLVRHVLSSYRLHLALDLTRPENRGDEALFKAFWHHTDAIVCCAWKGMP 777

Query: 720 VFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSS 779
            F FAN++GL+M ETT  +LQD+  +K  +++  +  +  F Q++QQ +  L  G+ +SS
Sbjct: 778 EFVFANRSGLEMFETTTSSLQDLDWDKTLNENECELSYTTFTQVLQQDYCSLPAGVRMSS 837

Query: 780 MGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            GR  +YERA+AWKVL++ E   CI F+FINWSFV
Sbjct: 838 TGRTTTYERALAWKVLDDNEAVECIAFLFINWSFV 872


>gi|109729909|tpg|DAA05768.1| TPA_inf: class III HD-Zip protein CNA2 [Medicago truncatula]
          Length = 518

 Score =  904 bits (2335), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/522 (84%), Positives = 467/522 (89%), Gaps = 28/522 (5%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M+CKDG    +DNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP+QI
Sbjct: 1   MACKDGNKHLMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPRQI 60

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKE+ RLQ VNRKLTAMNKLLMEENDRLQKQVS LVYENGYFRQ+TQ
Sbjct: 61  KVWFQNRRCREKQRKESFRLQGVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRQNTQ 120

Query: 123 STTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           +   ATKDTSC+SVVTSGQH++T QHPPRDASPAGLLSIAEETL EFLSKATGTAVEWVQ
Sbjct: 121 N---ATKDTSCDSVVTSGQHNMTSQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQ 177

Query: 183 MPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------------- 228
           MPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPTRVAEILKDRP              
Sbjct: 178 MPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPLWFRDCRAVDIVNV 237

Query: 229 ----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPP 278
                G  I      LYA TTLAPARDFWLLRYTSV+EDGSL+ CERSLKN QNGP+MPP
Sbjct: 238 LPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVVEDGSLI-CERSLKNTQNGPSMPP 296

Query: 279 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA 338
           V HFVRA+MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYES  VLAQKTTMA
Sbjct: 297 VPHFVRADMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESPMVLAQKTTMA 356

Query: 339 ALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD 398
           ALR LRQ++ EV+Q +V GWGRRPAALRALSQRLSRGFNEA+NGFTDEGWT+MGNDG+DD
Sbjct: 357 ALRHLRQISHEVSQPNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTMMGNDGVDD 416

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 458
           VT+LVNSSPDKLMGLNLSF NGFP+VSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD
Sbjct: 417 VTILVNSSPDKLMGLNLSFGNGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 476

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEE 500
           +N+D Y+AAAIKVGPCSL GSRVG +G QVILPL HTIEHEE
Sbjct: 477 HNMDAYTAAAIKVGPCSLTGSRVGNYGGQVILPLTHTIEHEE 518


>gi|449502845|ref|XP_004161759.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like, partial
           [Cucumis sativus]
          Length = 544

 Score =  903 bits (2333), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/545 (77%), Positives = 487/545 (89%), Gaps = 3/545 (0%)

Query: 271 QNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTV 330
           QNGP+MPPVQ+FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDL+PWSVPEVLRPLY+SST+
Sbjct: 2   QNGPSMPPVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLDPWSVPEVLRPLYKSSTL 61

Query: 331 LAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTV 390
           LAQK TMAALR LRQ++QEV+Q +V GWGRRPAALRALSQ+LSRGFNEAVNGFTDEGW++
Sbjct: 62  LAQKNTMAALRLLRQISQEVSQPNVTGWGRRPAALRALSQKLSRGFNEAVNGFTDEGWSL 121

Query: 391 MGNDGMDDVTVLVNSSPDK-LMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFL 449
           + NDG+DDVT+LVN S  K +MG N+S++NGFP++SNAVLCAKASMLLQNV PA+L+RFL
Sbjct: 122 LENDGVDDVTLLVNMSHGKTMMGANISYSNGFPSMSNAVLCAKASMLLQNVTPAMLIRFL 181

Query: 450 REHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEG 509
           REHRSEWAD++ID YSAAAIK G C LPGS  GTFG QVILPLA T+EHEEFMEV+K E 
Sbjct: 182 REHRSEWADSSIDAYSAAAIKTGQCGLPGSHAGTFGGQVILPLAQTVEHEEFMEVVKFEN 241

Query: 510 VGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD 569
           VGH  +D +MP D+FLLQLC+G+DEN VGT AELIFAPIDASF+DDAP+LPSGFRIIPLD
Sbjct: 242 VGHYRDDMLMPGDIFLLQLCNGVDENTVGTSAELIFAPIDASFSDDAPILPSGFRIIPLD 301

Query: 570 SGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVAT 629
           SG + SSPNRTLDLASAL++GPAGNRA+ + +  S   +SVMTIAF+F F+ H+Q++VA 
Sbjct: 302 SGMDASSPNRTLDLASALDVGPAGNRASGDCAGQSGKSKSVMTIAFQFVFDVHLQDNVAA 361

Query: 630 MARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLL 689
           MARQYVRSII+SVQRVALALSPSN    A L+TP G PEA TLARWI  SYRCY+G++LL
Sbjct: 362 MARQYVRSIIASVQRVALALSPSNFGPHANLQTPAGAPEAQTLARWITQSYRCYMGMELL 421

Query: 690 KSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFD 749
           K  +EG ES+LK+LWHH+DAVMCCSLKALP FTFANQ+GLDMLETTLVALQDITLEKIFD
Sbjct: 422 K--NEGRESVLKSLWHHSDAVMCCSLKALPNFTFANQSGLDMLETTLVALQDITLEKIFD 479

Query: 750 DHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFI 809
           D+G+K L +EFP+IMQQGF CLQGG+CLSSMGR VSYE+AVAWKVLNEEE AHCICFMF+
Sbjct: 480 DNGKKTLASEFPRIMQQGFICLQGGVCLSSMGRAVSYEKAVAWKVLNEEENAHCICFMFM 539

Query: 810 NWSFV 814
           NWSFV
Sbjct: 540 NWSFV 544


>gi|413957205|gb|AFW89854.1| rolled leaf1 [Zea mays]
          Length = 709

 Score =  892 bits (2305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/699 (63%), Positives = 531/699 (75%), Gaps = 37/699 (5%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           K   +D+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPKQIKVWFQN
Sbjct: 22  KVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQN 81

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLAT 128
           RRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + RQ  Q+T+LA 
Sbjct: 82  RRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTSLA- 140

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            DTSCES VT      TP +P RDAS P+GLL+IAEET TEFLSKATGTA++WVQMPGMK
Sbjct: 141 NDTSCESNVT------TPPNPIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 194

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDSVGIVAISHGC GVAARACGLV LEPT+  EILKDRP                   
Sbjct: 195 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDCRSLEVFTRFPAGN 254

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I      +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP     Q FV
Sbjct: 255 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASTQQFV 314

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T  ALR L
Sbjct: 315 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 374

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV +  
Sbjct: 375 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVIAC 434

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NS+       N     G P     ++CAKASMLLQ+VPPA+L+RFLREHRSEWAD NID 
Sbjct: 435 NSTKKIRNTSNAGITFGAPG---GIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDA 491

Query: 464 YSAAAIKVGPCSLPGSRVGTFG-SQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           Y A+++K   CSLPG R   F   Q+I+PLAHT+E+EE +EV++LEG   + ++A++ RD
Sbjct: 492 YLASSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRD 551

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           + LLQLC+G+DE +VG+  +L+FAPID  F DDAPL+ SGFR+IPLD   +  S  RTLD
Sbjct: 552 IHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDVKTDGVSSGRTLD 611

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           LAS+L++G A  +A+   S +   +RSV+TIAF+F +E H+Q+ VA MARQYVRS+IS+V
Sbjct: 612 LASSLDVGSAAPQASGE-SPDDCSLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAV 670

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYR 681
           QRV++A+SPS     AG R   G PEA TLARW+C SY+
Sbjct: 671 QRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYQ 709


>gi|413957206|gb|AFW89855.1| rolled leaf1 [Zea mays]
          Length = 713

 Score =  891 bits (2303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/699 (63%), Positives = 531/699 (75%), Gaps = 37/699 (5%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           K   +D+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPKQIKVWFQN
Sbjct: 22  KVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQN 81

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLAT 128
           RRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + RQ  Q+T+LA 
Sbjct: 82  RRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTSLA- 140

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            DTSCES VT      TP +P RDAS P+GLL+IAEET TEFLSKATGTA++WVQMPGMK
Sbjct: 141 NDTSCESNVT------TPPNPIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 194

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDSVGIVAISHGC GVAARACGLV LEPT+  EILKDRP                   
Sbjct: 195 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDCRSLEVFTRFPAGN 254

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I      +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP     Q FV
Sbjct: 255 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASTQQFV 314

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T  ALR L
Sbjct: 315 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 374

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV +  
Sbjct: 375 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVIAC 434

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NS+       N     G P     ++CAKASMLLQ+VPPA+L+RFLREHRSEWAD NID 
Sbjct: 435 NSTKKIRNTSNAGITFGAPG---GIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDA 491

Query: 464 YSAAAIKVGPCSLPGSRVGTFG-SQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           Y A+++K   CSLPG R   F   Q+I+PLAHT+E+EE +EV++LEG   + ++A++ RD
Sbjct: 492 YLASSLKTSACSLPGLRPMRFSEGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRD 551

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           + LLQLC+G+DE +VG+  +L+FAPID  F DDAPL+ SGFR+IPLD   +  S  RTLD
Sbjct: 552 IHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLDVKTDGVSSGRTLD 611

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           LAS+L++G A  +A+   S +   +RSV+TIAF+F +E H+Q+ VA MARQYVRS+IS+V
Sbjct: 612 LASSLDVGSAAPQASGE-SPDDCSLRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAV 670

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYR 681
           QRV++A+SPS     AG R   G PEA TLARW+C SY+
Sbjct: 671 QRVSMAISPSQSGLNAGHRMLSGFPEAATLARWVCQSYQ 709


>gi|158252034|gb|ABW24026.1| class III HD-Zip protein 8 [Eucommia ulmoides]
          Length = 533

 Score =  890 bits (2301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/535 (81%), Positives = 470/535 (87%), Gaps = 26/535 (4%)

Query: 58  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYF 117
           EPKQIKVWFQNRRCREKQRKEASRL+AVNRKLTAMNKLLMEENDRLQKQVSQLVYEN YF
Sbjct: 1   EPKQIKVWFQNRRCREKQRKEASRLRAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSYF 60

Query: 118 RQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTA 177
           RQ TQ+ TLAT DTSCESVVTSGQH LT QHPPRDASPAGL+SIAEETLTEFLSKATGTA
Sbjct: 61  RQQTQNATLATTDTSCESVVTSGQHQLT-QHPPRDASPAGLMSIAEETLTEFLSKATGTA 119

Query: 178 VEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR---------- 227
           VEWVQMPGMKPGPDS+GI+AISHGC+GVA+RACGLVGLEP+RVA+ILKDR          
Sbjct: 120 VEWVQMPGMKPGPDSIGIIAISHGCTGVASRACGLVGLEPSRVADILKDRLSWFRDCRAV 179

Query: 228 --------PRGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNG 273
                     G  I      LYA TTLAPARDFWLLRYTSVLEDGSLVVCERSL N QNG
Sbjct: 180 NVLNVLSTANGGTIELIYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNG 239

Query: 274 PTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQ 333
           P+MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST+L+Q
Sbjct: 240 PSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLSQ 299

Query: 334 KTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGN 393
           +TTMAALRQLRQ++QEV+Q  V  WGRRPAALRALSQRLS+GFNEAVNGFTDEGW+++ +
Sbjct: 300 RTTMAALRQLRQISQEVSQPVVANWGRRPAALRALSQRLSKGFNEAVNGFTDEGWSMIES 359

Query: 394 DGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHR 453
           DG+DDVTVLVNSSP K+M  +LS+ NGFP+V NAVLCAKASMLLQNVPPAILLRFLREHR
Sbjct: 360 DGIDDVTVLVNSSPGKMMSGDLSYTNGFPSV-NAVLCAKASMLLQNVPPAILLRFLREHR 418

Query: 454 SEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHS 513
           SEWAD+ ID YSA+A+K  PC LP SR G FG QVILPLAHTIEHEEFMEVIKLE + H 
Sbjct: 419 SEWADSGIDSYSASAVKAVPCCLPVSRAGYFGGQVILPLAHTIEHEEFMEVIKLENMAHF 478

Query: 514 PEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPL 568
            ED IM  D+FLLQLCSG+DE ++GTC ELIFAPIDASF+D+APLLPSGFRIIPL
Sbjct: 479 QEDMIMANDIFLLQLCSGVDEKSIGTCVELIFAPIDASFSDNAPLLPSGFRIIPL 533


>gi|402575788|gb|AFQ69084.1| HB8, partial [Pisum sativum]
          Length = 550

 Score =  889 bits (2298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/549 (79%), Positives = 474/549 (86%), Gaps = 30/549 (5%)

Query: 5   CKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 64
           CKDG   ++DNGKYVRYTPEQVEALERLYHECPKP+S+RRQQLIRECPILS+IEPKQIKV
Sbjct: 7   CKDGSKIAMDNGKYVRYTPEQVEALERLYHECPKPTSLRRQQLIRECPILSHIEPKQIKV 66

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST 124
           WFQNRRCREKQRKEA RLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN  FRQHT + 
Sbjct: 67  WFQNRRCREKQRKEAGRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSVFRQHTPNG 126

Query: 125 TLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
            +AT DTSCESVVTSGQ     QHPPRDASPAGLLSIAEETL EFLSKATGTAVEWVQMP
Sbjct: 127 AIATTDTSCESVVTSGQ-----QHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMP 181

Query: 185 GMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR----------------- 227
           GMKPGPDS+GIVAISHG  GVAARACGLVGLEP RVAEILKDR                 
Sbjct: 182 GMKPGPDSIGIVAISHGSPGVAARACGLVGLEPARVAEILKDRLAWYRDCRTVDVLNVMS 241

Query: 228 -PRGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQ 280
              G  I      LYA TTLAP RDFWLLRYTS+LEDGSLVVCERSL NIQNGP+MPPV 
Sbjct: 242 TGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNIQNGPSMPPVP 301

Query: 281 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL 340
           HFVRA++LPSGYLIRPCEGGGSIIHIVDHM LEPWSVPEVLRPLYESS +LAQ+TTMAAL
Sbjct: 302 HFVRADVLPSGYLIRPCEGGGSIIHIVDHMLLEPWSVPEVLRPLYESSMLLAQRTTMAAL 361

Query: 341 RQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVT 400
           R LRQ++QEV+Q SV GWGRRPAALR LSQRLS+GFNEAVNGFTD+GW+++ +DG+DDVT
Sbjct: 362 RHLRQISQEVSQPSVTGWGRRPAALRTLSQRLSKGFNEAVNGFTDDGWSMLESDGIDDVT 421

Query: 401 VLVNSSPDKLMGLNLSFAN-GFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADN 459
           ++VNSSP K+MG+N  + N GFP+V+++VLCAKASMLLQNVPPAILLRFLREHRSEWAD 
Sbjct: 422 LIVNSSPSKMMGINNGYNNSGFPSVTSSVLCAKASMLLQNVPPAILLRFLREHRSEWADT 481

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
           +ID YSAAAIK GPCSLPG+R G+FG QVILPLAHTIEHEEFMEVIKLE +G+  +D  M
Sbjct: 482 SIDAYSAAAIKAGPCSLPGTRPGSFGGQVILPLAHTIEHEEFMEVIKLENMGYYRDDMTM 541

Query: 520 PRDMFLLQL 528
           P D+FLLQL
Sbjct: 542 PGDIFLLQL 550


>gi|317160486|gb|ADV04325.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 851

 Score =  888 bits (2294), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/854 (52%), Positives = 601/854 (70%), Gaps = 55/854 (6%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           KDGK G  D+GKYVRYT EQV+ALE+ Y ECPKP++ RRQQLIRECP+LSNIEPKQIKVW
Sbjct: 7   KDGKYG-FDSGKYVRYTEEQVQALEKFYSECPKPNAFRRQQLIRECPLLSNIEPKQIKVW 65

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH----- 120
           FQNRRCREKQRKEA+RL A+N KL AMNK+L+++ND L KQ  Q V +N + R+      
Sbjct: 66  FQNRRCREKQRKEATRLLALNEKLKAMNKVLVKQNDNLSKQAFQFVSQNNFLRRQLKLLK 125

Query: 121 TQSTTL-------ATKDTSCESVVTSG-QHHLTPQHPPRDASPAGLLSIAEETLTEFLSK 172
            QST L        T +TS  S + SG + H  PQ PP D +PA LL+ AEE L+EFL+K
Sbjct: 126 EQSTNLDGSKDALVTTETSSISRLVSGLRKHRVPQPPPWDVNPAWLLAFAEEALSEFLAK 185

Query: 173 ATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP---- 228
           ATGT ++W+Q+PGMKPGPDS+GIVA+ HGC G AARAC LVG+E +RVA++LKDRP    
Sbjct: 186 ATGTGIDWIQIPGMKPGPDSIGIVAVGHGCDGAAARACSLVGMESSRVADVLKDRPGWFC 245

Query: 229 --------------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLK 268
                          G+ +      +Y+ TTL  ARDF  LRYTSVLED +LVVCERSL 
Sbjct: 246 DCRRMEILGAFTTSSGATVELLYSQMYSPTTLTQARDFCTLRYTSVLEDRNLVVCERSL- 304

Query: 269 NIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESS 328
              N   +PP + FVRAEML SGYLIRPC G GSI++IVDHMDLE    PEVLRP+YESS
Sbjct: 305 ---NLGMVPPNEGFVRAEMLSSGYLIRPCGGVGSIVYIVDHMDLEAGRAPEVLRPMYESS 361

Query: 329 TVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW 388
            +LAQK T++ALR LR +AQE     V G   +PAALRALS R++R FN+A+N F ++GW
Sbjct: 362 AILAQKMTISALRHLRSLAQEAAGEVVTGGTLQPAALRALSLRIARSFNDAINSFPEDGW 421

Query: 389 TVMGNDGMDDVTVLVNSS-PDKLMGLNLSFANGFPAVSNA-VLCAKASMLLQNVPPAILL 446
             + +DG+DD+++ +NSS   + +GL  S +N   +  +  VLCAKASMLLQNVPPA+L+
Sbjct: 422 FSVASDGIDDISISLNSSWSPRTVGLKCSSSNNLWSDGDGGVLCAKASMLLQNVPPAVLI 481

Query: 447 RFLREHRSEWAD---NNIDVYSAAAIKV---GPCSLPGSRVGTFGSQVILPLAHTIEHEE 500
           RFLREHRSEWAD      DV  +A ++    G  +L G+ +G    +V +PLAH+ EH+E
Sbjct: 482 RFLREHRSEWADWADCEHDVSCSATLRTRVYGAAALGGAELGR--REVPMPLAHS-EHQE 538

Query: 501 FMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLP 560
            ME++K EG   + + A++ ++M+LLQLC+G+DE A+G CA+L+FAP+D + +DD PLLP
Sbjct: 539 IMELVKFEGYDSARDGALVSKEMYLLQLCNGIDETAIGDCAQLVFAPVDGALSDDIPLLP 598

Query: 561 SGFRIIPLDSG-KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAF 619
           SGFR+IPLD+   +    + TLDLAS LE G   + A      +S  +RS++TIAF+F +
Sbjct: 599 SGFRVIPLDTDFMDGYGMSCTLDLASMLEGGSDMDAAKTETGISSNNLRSIVTIAFQFGY 658

Query: 620 ESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHS 679
           E+H  + V+  AR+Y+R++++SVQRVA+A++P  + S  GLR   GT E LTL + I  S
Sbjct: 659 ETHNCDSVSVAARKYMRTVVASVQRVAMAIAP-RVGSTLGLRNLSGTSEVLTLVKRIVGS 717

Query: 680 YRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVAL 739
           YR   G+DLL+     +E + K +WHH+DA++CC+ K+LP F FAN+A LDMLETT   L
Sbjct: 718 YRINFGMDLLRKQPSNNEELFKMVWHHSDALICCTCKSLPEFIFANEAALDMLETTSGGL 777

Query: 740 QDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE 799
           QD+  ++  D+  +K  +++  ++MQQGFA L  GI LSSMGRPV+YERA+AW ++++ E
Sbjct: 778 QDLRWDQTLDETEKKNAYSDITKVMQQGFAYLPAGIRLSSMGRPVAYERAMAWSIVDDNE 837

Query: 800 TAHCICFMFINWSF 813
           +  C+ FMF+NWSF
Sbjct: 838 SMPCVAFMFVNWSF 851


>gi|89514853|gb|ABD75301.1| class III homeodomain-leucine zipper protein C3HDZ2 [Selaginella
           kraussiana]
          Length = 840

 Score =  877 bits (2265), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/865 (54%), Positives = 598/865 (69%), Gaps = 82/865 (9%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M  K+ K G +D+GKY+RYTPEQVEALER+Y+ECPKPSSIRRQQL+RE P+L+NIEP+QI
Sbjct: 4   MKMKEPK-GIMDSGKYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPLLANIEPRQI 62

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN-------- 114
           KVWFQNRRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  +QL  +N        
Sbjct: 63  KVWFQNRRCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHNTQLALDNQYLRQQLQ 122

Query: 115 ---GYFRQHTQSTT--------LATKDTSCESVVTSG--QHHLT-----PQHPPRDASPA 156
              G   +  ++T+        +   D S +S VT G  Q H+T     PQ   RD+S A
Sbjct: 123 QQTGASDREPKTTSSRRYNNNEVVAADRSPDSEVTGGMPQQHITATTAAPQ-IARDSSHA 181

Query: 157 GLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLE 216
           GLL+IAEETL EFL+KATGTAV+W+ MPGMKPGPDSVG  AISHG + VAARA GLVGLE
Sbjct: 182 GLLAIAEETLAEFLAKATGTAVDWIHMPGMKPGPDSVGTAAISHGSTSVAARAWGLVGLE 241

Query: 217 PTRVAEILKDR------------------PRGSAI------LYALTTLAPARDFWLLRYT 252
           P++VAEILKDR                  P G  +      +YA TTLA  RDFW +RYT
Sbjct: 242 PSKVAEILKDRPSWHRECRRLEVLRAFSTPNGGTVELVYTQMYAPTTLAAGRDFWTIRYT 301

Query: 253 SVLEDGSLVVCERSLKNIQNGPTMPPV-QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMD 311
           S LEDG LV+CERSL  I  GP+       FVRAEMLPSGYLIRP EGG   IHIVDHM+
Sbjct: 302 SFLEDG-LVICERSLNGIHGGPSNKQSGSDFVRAEMLPSGYLIRPYEGGMCSIHIVDHME 360

Query: 312 LEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQR 371
           LE W V EVLRPLYESS+VLAQK T+AALR LR++   V +SSV    ++ AA R +S+R
Sbjct: 361 LESWKVLEVLRPLYESSSVLAQKMTLAALRYLRRL---VYESSVERGAQQIAAWRGVSRR 417

Query: 372 LSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD-KLMGLNLSFANGFPAVSNAVLC 430
           ++RGFNEAVN FTD+GW+ +  DG++DVTV +N++P    +G  L+ A+   AV   VLC
Sbjct: 418 IARGFNEAVNCFTDDGWSTLVTDGVEDVTVAINTNPTASSIGGQLASADRLYAVGGGVLC 477

Query: 431 AKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVIL 490
           AKASMLLQNVPPA L+RFLREHRSEWAD NI   + ++++ G      + +G    Q  +
Sbjct: 478 AKASMLLQNVPPATLIRFLREHRSEWADCNI---TDSSLRHGMARGANAFIG----QYPV 530

Query: 491 PLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDA 550
           PL H+ E EEF+EV+KLEG        I+PR+  LLQLCSG D+NAVG CA+L+FAP+DA
Sbjct: 531 PLIHSSEEEEFLEVVKLEGHTTGQNGVILPRETVLLQLCSGNDDNAVGACAQLVFAPVDA 590

Query: 551 SFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTC-MRS 609
           + +DD PLLPSGFR+IPLDSG +     RTLDLAS+LE G  G R    ++   +C +RS
Sbjct: 591 AVSDDVPLLPSGFRVIPLDSGLD----GRTLDLASSLEGGAEGGR----FAEEPSCHLRS 642

Query: 610 VMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEA 669
           V+T+AF+F FE+H ++ VA  ARQYVR+++ SVQ VALAL+   +  + G R      EA
Sbjct: 643 VLTMAFQFLFEAHNRDDVAASARQYVRNVMVSVQSVALALASFRLGPRVGPR----NVEA 698

Query: 670 LTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGL 729
           L LA+ I  SY+   G+DL +S    +++     WHH DA++CC+ K +P F FAN+AGL
Sbjct: 699 LLLAQQILRSYKANFGLDLTESDPGSTDA----FWHHKDAILCCTWKTIPEFIFANRAGL 754

Query: 730 DMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERA 789
           +ML+TT   L  +  +K  DD+GRK+  ++F QI+QQGFA L  GI +SS GRP +YER 
Sbjct: 755 EMLDTTWNDLHGLPWDKTLDDNGRKSSASDFAQIIQQGFAELPAGIRISSKGRPAAYERV 814

Query: 790 VAWKVLNEEETAHCICFMFINWSFV 814
           +AWKVL+EE  A  I +MF+NWSF+
Sbjct: 815 IAWKVLDEENNAQFIAYMFMNWSFL 839


>gi|110349512|gb|ABG73231.1| class III HD-Zip protein HDZ31 [Selaginella kraussiana]
          Length = 825

 Score =  867 bits (2241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/852 (54%), Positives = 588/852 (69%), Gaps = 81/852 (9%)

Query: 16  GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 75
           GKYVRYTPEQVEALER+Y+ECPKPSSIRRQQL+RE P+L+NIEP+QIKVWFQNRRCREKQ
Sbjct: 1   GKYVRYTPEQVEALERVYNECPKPSSIRRQQLLREYPLLANIEPRQIKVWFQNRRCREKQ 60

Query: 76  RKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN-----------GYFRQHTQST 124
           RKE SRLQ+VN  LTAMNK++MEEN+RL K  +QL  +N           G   +  ++T
Sbjct: 61  RKETSRLQSVNSSLTAMNKIIMEENERLTKHNTQLALDNQYLRQQLQQQTGASDREPKTT 120

Query: 125 T--------LATKDTSCESVVTSG--QHHLT-----PQHPPRDASPAGLLSIAEETLTEF 169
           +        +   D S +S VT G  Q H+T     PQ   RD+S AGLL+IAEETL EF
Sbjct: 121 SSRRYNNNEVVAADRSPDSEVTGGMPQQHITATTAAPQ-IARDSSHAGLLAIAEETLAEF 179

Query: 170 LSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR-- 227
           L+KATGTAV+W+ MPGMKPGPDSVG  AISHG + VAARA GLVGLEP++VAEILKDR  
Sbjct: 180 LAKATGTAVDWIHMPGMKPGPDSVGTAAISHGSTSVAARAWGLVGLEPSKVAEILKDRPS 239

Query: 228 ----------------PRGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCER 265
                           P G  +      +YA TTLA  RDFW +RYTS LEDG LV+CER
Sbjct: 240 WHRECRRLEVLRAFSTPNGGTVELVYTQMYAPTTLAAGRDFWTIRYTSFLEDG-LVICER 298

Query: 266 SLKNIQNGPTMPPV-QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPL 324
           SL  I  GP+       FVRAEMLPSGYLIRP EGG   IHIVDHM+LE W V EVLRPL
Sbjct: 299 SLNGIHGGPSNKQSGSDFVRAEMLPSGYLIRPYEGGMCSIHIVDHMELESWKVLEVLRPL 358

Query: 325 YESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFT 384
           YESS+VLAQK T+AALR LR++   V +SSV    ++ AA R +S+R++RGFNEAVN FT
Sbjct: 359 YESSSVLAQKMTLAALRYLRRL---VYESSVERGAQQIAAWRGVSRRIARGFNEAVNCFT 415

Query: 385 DEGWTVMGNDGMDDVTVLVNSSPD-KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPA 443
           D+GW+ +  DG++DVTV +N++P    +G  L+ A+   AV   VLCAKASMLLQNVPPA
Sbjct: 416 DDGWSTLVTDGVEDVTVAINTNPTASSIGGQLASADRLYAVGGGVLCAKASMLLQNVPPA 475

Query: 444 ILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFME 503
            L+RFLREHRSEWAD NI   + ++++ G      + +G    Q  +PL H+ E EEF+E
Sbjct: 476 TLIRFLREHRSEWADCNI---TDSSLRHGMARGANAFIG----QYPVPLIHSSEEEEFLE 528

Query: 504 VIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGF 563
           V+KLEG        I+PR+  LLQLCSG D+NAVG CA+L+FAP+DA+ +DD PLLPSGF
Sbjct: 529 VVKLEGHTTGQNGVILPRETVLLQLCSGNDDNAVGACAQLVFAPVDAAVSDDVPLLPSGF 588

Query: 564 RIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTC-MRSVMTIAFEFAFESH 622
            +IPLDSG +     RTLDLAS+LE G  G R    ++   +C +RSV+T+AF+F FE+H
Sbjct: 589 HVIPLDSGLD----GRTLDLASSLEGGAEGGR----FAEEPSCHLRSVLTMAFQFLFEAH 640

Query: 623 MQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRC 682
            ++ VA  ARQYVR+++ SVQ VALAL+   +  + G R      EAL LA+ I  SY+ 
Sbjct: 641 NRDDVAASARQYVRNVMVSVQSVALALASFRLGPRVGPR----NVEALLLAQQILRSYKA 696

Query: 683 YLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDI 742
             G+DL +S    +++     WHH DA +CC+ K +P F FAN+AGL+ML+TT   L  +
Sbjct: 697 NFGLDLTESDPGSTDA----FWHHKDATLCCTWKTIPEFIFANRAGLEMLDTTWNDLHGL 752

Query: 743 TLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAH 802
             +K  DD+GRK+  ++F QI+QQGFA L  GI +SS GRP +YER +AWKVL+EE  A 
Sbjct: 753 PWDKTLDDNGRKSSASDFAQIIQQGFAELPAGIRISSKGRPAAYERVIAWKVLDEENNAQ 812

Query: 803 CICFMFINWSFV 814
            I +MF+NWSF+
Sbjct: 813 FIAYMFMNWSFL 824


>gi|302755606|ref|XP_002961227.1| hypothetical protein SELMODRAFT_270225 [Selaginella moellendorffii]
 gi|300172166|gb|EFJ38766.1| hypothetical protein SELMODRAFT_270225 [Selaginella moellendorffii]
          Length = 855

 Score =  860 bits (2221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/871 (53%), Positives = 581/871 (66%), Gaps = 79/871 (9%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M  KD     +D GKY+RYTPEQVEALER+Y+ECPKPSSIRRQQL+RE P+L+NIEP+QI
Sbjct: 4   MKMKDSSKHIMDAGKYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPVLANIEPRQI 63

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYF----- 117
           KVWFQNRRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  EN Y      
Sbjct: 64  KVWFQNRRCREKQRKETSRLQSVNASLTAMNKIIMEENERLTKHSSQLALENQYLRQQLQ 123

Query: 118 -------------RQHTQSTTLATKDTSCESVVTSGQHH-----------LTPQHPPRDA 153
                        R    +      D S +S VT G                PQ   RD+
Sbjct: 124 QQGGSERDLKLSRRYANDAQAALAADRSPDSEVTGGMPQQLVAASTTTTTTAPQ-IARDS 182

Query: 154 SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLV 213
           SPAGLL+IAEETLTEFL+KA GTAV+W+Q+PGMKPGPDS G  AISHG +GVAARA GLV
Sbjct: 183 SPAGLLAIAEETLTEFLAKARGTAVDWIQLPGMKPGPDSAGTAAISHGSTGVAARAWGLV 242

Query: 214 GLEPTRVAEILKDR------------------PRGSAI------LYALTTLAPARDFWLL 249
           GLEP +VAEILKDR                  P G  +      +YA TTLA ARDFW L
Sbjct: 243 GLEPDKVAEILKDRSSWLRDCRRLEVLRAFPTPNGGTVELVYTQMYAPTTLAAARDFWTL 302

Query: 250 RYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDH 309
           RYT+ L++G LVVCE+SL  +   P       FVRAEML SG+LIRP EG    I+IVDH
Sbjct: 303 RYTTFLDEGDLVVCEKSLSGVHGLPAAKAGNDFVRAEMLASGFLIRPFEGNVCSIYIVDH 362

Query: 310 MDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQE--VTQSSVNGWGRRPAALRA 367
           MDLE W V EVLRPLYESS+VLAQ+ T+ ALR LR++  E  + +++  G  ++ AA R 
Sbjct: 363 MDLESWKVHEVLRPLYESSSVLAQRMTLGALRFLRRLIYESPLNENAPRG-AQQSAAWRG 421

Query: 368 LSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVLVNSSPD-KLMGLNLSFANGFPAVS 425
           +S+R++RGFNEAVN F D+GW +   D +D DVTV +N +P+   +G  +   +   AV 
Sbjct: 422 VSRRIARGFNEAVNSFADDGWMI--TDAIDGDVTVAINVAPNASSIGGQVMPPDRLYAVG 479

Query: 426 NAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFG 485
             VLCAKASMLLQNVPPA L+RFLREHRSEWAD N+ V   A+++   C    SR    G
Sbjct: 480 GGVLCAKASMLLQNVPPATLIRFLREHRSEWADCNV-VLDTASMRASACGF--SRGNVIG 536

Query: 486 SQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIF 545
            Q  +PL  + E EEF+EV+KLEG        ++PR+  LLQLCSG D+NA+G CA+L+F
Sbjct: 537 -QCPVPLVQSAEEEEFLEVVKLEGHASGQNGVVIPRETVLLQLCSGHDDNAMGVCAQLVF 595

Query: 546 APIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNST 605
           AP+DA+ ++D PLLPSGFR+IPLDSG ++S  +RTLDLAS+LE    G      +   S 
Sbjct: 596 APVDAAVSEDVPLLPSGFRVIPLDSGVDSSGLSRTLDLASSLE----GGADIGKFPDESG 651

Query: 606 C-MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPL 664
           C +RSV+T+AF+F FE+H ++ VAT ARQYVR +++SVQ +A+AL+   +  + G R   
Sbjct: 652 CHLRSVLTLAFQFLFEAHNRDEVATSARQYVRHVMASVQSIAMALASFRLGPRVGPR--- 708

Query: 665 GTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKAL-PVFTF 723
              EAL LA  I  SYR     DL +S    +++     WHH DA++CC+ KA+ P F F
Sbjct: 709 -NVEALLLAHQILRSYRANFASDLTESDPGSTDA----FWHHKDAILCCTWKAMIPEFVF 763

Query: 724 ANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRP 783
           AN+AGL+MLETT   L  I  +K  DD+ RKA  AEF QI+QQG+ACL  GI LSS GRP
Sbjct: 764 ANRAGLEMLETTWSELHGIPWDKTLDDNARKASAAEFSQIIQQGYACLPPGIKLSSKGRP 823

Query: 784 VSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            +Y+RAVAWKV++EE+ A C+ +MFINWSF+
Sbjct: 824 AAYDRAVAWKVVDEEDNAQCVAYMFINWSFL 854


>gi|302772080|ref|XP_002969458.1| hypothetical protein SELMODRAFT_146209 [Selaginella moellendorffii]
 gi|110349516|gb|ABG73233.1| class III HD-Zip protein HDZ31 [Selaginella moellendorffii]
 gi|300162934|gb|EFJ29546.1| hypothetical protein SELMODRAFT_146209 [Selaginella moellendorffii]
          Length = 855

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/871 (53%), Positives = 580/871 (66%), Gaps = 79/871 (9%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M  KD     +D GKY+RYTPEQVEALER+Y+ECPKPSSIRRQQL+RE P+L+NIEP+QI
Sbjct: 4   MKMKDSNKHIMDAGKYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPVLANIEPRQI 63

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYF----- 117
           KVWFQNRRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  EN Y      
Sbjct: 64  KVWFQNRRCREKQRKETSRLQSVNASLTAMNKIIMEENERLTKHSSQLALENQYLRQQLQ 123

Query: 118 -------------RQHTQSTTLATKDTSCESVVTSGQHH-----------LTPQHPPRDA 153
                        R    +      D S +S VT G                PQ   RD+
Sbjct: 124 QQGGSERDLKLSRRYANDAQAALAADRSPDSEVTGGMPQQLVAASTTTTTTAPQ-IARDS 182

Query: 154 SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLV 213
           SPAGLL+IAEETLTEFL+KA GTAV+W+Q+PGMKPGPDS G  AISHG +GVAARA GLV
Sbjct: 183 SPAGLLAIAEETLTEFLAKARGTAVDWIQLPGMKPGPDSAGTAAISHGSTGVAARAWGLV 242

Query: 214 GLEPTRVAEILKDR------------------PRGSAI------LYALTTLAPARDFWLL 249
           GLEP +VAEILKDR                  P G  +      +YA TTLA ARDFW L
Sbjct: 243 GLEPDKVAEILKDRSSWLRDCRRLEVLRAFPTPNGGTVELVYTQMYAPTTLAAARDFWTL 302

Query: 250 RYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDH 309
           RYT+ L++G LVVCE+SL  +   P       FVRAEML SG+LIRP EG    I+IVDH
Sbjct: 303 RYTTFLDEGDLVVCEKSLSGVHGLPAAKAGNDFVRAEMLASGFLIRPFEGNVCSIYIVDH 362

Query: 310 MDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQE--VTQSSVNGWGRRPAALRA 367
           MDLE W V EVLRPLYESS+VLAQ+ T+ ALR LR++  E  + +++  G  ++ AA R 
Sbjct: 363 MDLESWKVHEVLRPLYESSSVLAQRMTLGALRFLRRLIYESPLNENAPRG-AQQSAAWRG 421

Query: 368 LSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVLVNSSPD-KLMGLNLSFANGFPAVS 425
           +S+R++RGFNEAVN F D+GW +   D +D DVTV +N +P+   +G  +   +   AV 
Sbjct: 422 VSRRIARGFNEAVNSFADDGWMI--TDAIDGDVTVAINVAPNASSIGGQVMPPDRLYAVG 479

Query: 426 NAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFG 485
             VLCAKASMLLQNVPPA L+RFLREHRSEWAD N+ V   A+++   C    SR    G
Sbjct: 480 GGVLCAKASMLLQNVPPATLIRFLREHRSEWADCNV-VLDTASMRASACGF--SRGNVIG 536

Query: 486 SQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIF 545
            Q  +PL  + E EEF+EV+KLEG        ++PR+  LLQLCSG D+NA G CA+L+F
Sbjct: 537 -QCPVPLVQSAEEEEFLEVVKLEGHASGQNGVVIPRETVLLQLCSGHDDNATGVCAQLVF 595

Query: 546 APIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNST 605
           AP+DA+ ++D PLLPSGFR+IPLDSG ++S  +RTLDLAS+LE    G      +   S 
Sbjct: 596 APVDAAVSEDVPLLPSGFRVIPLDSGVDSSGLSRTLDLASSLE----GGADIGKFPDESG 651

Query: 606 C-MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPL 664
           C +RSV+T+AF+F FE+H ++ VAT ARQYVR +++SVQ +A+AL+   +  + G R   
Sbjct: 652 CHLRSVLTLAFQFLFEAHNRDEVATSARQYVRHVMASVQSIAMALASFRLGPRVGPR--- 708

Query: 665 GTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKAL-PVFTF 723
              EAL LA  I  SYR     DL +S    +++     WHH DA++CC+ KA+ P F F
Sbjct: 709 -NVEALLLAHQILRSYRANFASDLTESDPGSTDA----FWHHKDAILCCTWKAMIPEFVF 763

Query: 724 ANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRP 783
           AN+AGL+MLETT   L  I  +K  DD+ RKA  AEF QI+QQG+ACL  GI LSS GRP
Sbjct: 764 ANRAGLEMLETTWSELHGIPWDKTLDDNARKASAAEFSQIIQQGYACLPPGIKLSSKGRP 823

Query: 784 VSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            +Y+RAVAWKV++EE+ A C+ +MFINWSF+
Sbjct: 824 AAYDRAVAWKVVDEEDNAQCVAYMFINWSFL 854


>gi|168828723|gb|ACA33848.1| class III HD-Zip transcription factor HDZ31 [Pinus taeda]
          Length = 590

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/591 (69%), Positives = 487/591 (82%), Gaps = 27/591 (4%)

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDS+GIVAIS+ C+GVAARACGLVGL+PT+VAEI KDRP                   
Sbjct: 1   PGPDSIGIVAISNTCNGVAARACGLVGLDPTKVAEIFKDRPSWLRDCRCLDVLTAFPTGN 60

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I       YA TTLA ARDFW LRYT+VLEDGSLVVCERSL   Q GP++PPVQHFV
Sbjct: 61  GGTIELLYMQTYAATTLAFARDFWTLRYTTVLEDGSLVVCERSLSGTQGGPSIPPVQHFV 120

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYLI+PCEGGGSII IVDHMDLEPWSVPEVLRPLYESSTVLAQK T+AALR+L
Sbjct: 121 RAEMLPSGYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRRL 180

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE T   V GWGR+PA LR  SQRLSRGFNEAVNGFTD+GW++MG+DG++DVT+ +
Sbjct: 181 RQIAQEATGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGSDGVEDVTIAI 240

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NSSP+K     ++ +NG   +   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD+NID 
Sbjct: 241 NSSPNKHFASQVNASNGLTTLGGGILCAKASMLLQNVPPALLVRFLREHRSEWADSNIDA 300

Query: 464 YSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           YSAAA+K  P S+PGSR G F GSQVILPLAHT+EHEEF+EVIKLEG G + E+A++ RD
Sbjct: 301 YSAAALKSSPYSVPGSRAGGFSGSQVILPLAHTVEHEEFLEVIKLEGHGLTQEEAVLSRD 360

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS-SPNRTL 581
           MFLLQLCSG+DENA G CAEL+FAPID SFADDAPLLPSGFR+IPL+S  + S  PNRTL
Sbjct: 361 MFLLQLCSGIDENAAGACAELVFAPIDESFADDAPLLPSGFRVIPLESRTDGSGGPNRTL 420

Query: 582 DLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISS 641
           DLASALE+G  G R + +  T+S  +RSV+TIAF+F +ESH++E+VA MARQYVRS+++S
Sbjct: 421 DLASALEVGSTGTRTSGDSGTSSN-LRSVLTIAFQFTYESHLRENVAAMARQYVRSVVAS 479

Query: 642 VQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILK 701
           VQRVA+A++PS ++S  G R P GTPEALTLARWIC SYR ++GVDL ++  E SES+LK
Sbjct: 480 VQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLK 539

Query: 702 NLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHG 752
            LWHH+DA+MCCS+K+LPVFTFANQAGLDMLETTLVALQDI+L+KI D++G
Sbjct: 540 LLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENG 590


>gi|90110438|gb|ABD90521.1| class III homeodomain-leucine zipper [Physcomitrella patens]
          Length = 737

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/742 (58%), Positives = 544/742 (73%), Gaps = 48/742 (6%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+YHECPKPSSIRR QLI+ECPIL+NIEPKQIKVWFQNRRCREK
Sbjct: 4   SGKYVRYTNEQVEALERVYHECPKPSSIRRHQLIKECPILANIEPKQIKVWFQNRRCREK 63

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH-------------T 121
           QRKEA+RL +VN KLTA+NKLLMEEN+RL K  SQL  +N   RQ              +
Sbjct: 64  QRKEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLDNHALRQQLPNLPVPDGKCRLS 123

Query: 122 QSTTLATKDTSCESVVTSG-QHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
               +A+ DTSC+S VT G   HLT QH   DASPAGLLS+AEETLT+FL+KATGTAV+W
Sbjct: 124 GQAGVASTDTSCDSAVTGGLPQHLTSQHSSPDASPAGLLSMAEETLTDFLAKATGTAVDW 183

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           +Q+PGMKPGPD++GI+AISHGC G+AARACGL  L+ ++VAEILKDRP            
Sbjct: 184 IQLPGMKPGPDAIGIIAISHGCVGIAARACGLAALDFSKVAEILKDRPGWSQDCRRMEVL 243

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  I      +YA TTLAPARDF  LRYT++LEDG+LV+CERSL    NGPTM
Sbjct: 244 GTLPTGNGGTIELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLTGKHNGPTM 303

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           PPVQ F+RAEM PSGYLIRPCEGGG IIHIVDH++ EPWSVPEVLRPLYES  VLA K+T
Sbjct: 304 PPVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESPAVLAHKST 363

Query: 337 MAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           +AALR LR++A E +   +   G+ PA +R LSQRL++GFN+AVNGF D+GW  M +DGM
Sbjct: 364 IAALRYLRRIAAEESGEIIIRNGQHPAVIRTLSQRLTKGFNDAVNGFGDDGWVPMESDGM 423

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           DDV+V++N++P  + G  ++      ++   +LCAKASMLLQNVPPA+L+RFLREHRSEW
Sbjct: 424 DDVSVMLNATPKSMEG-QIATDKLLFSLGGGILCAKASMLLQNVPPALLIRFLREHRSEW 482

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP-E 515
           AD+ ID  +A A + G  +   SR      Q+ LPLA   E  EF+EV+KLE  GHS  +
Sbjct: 483 ADHEIDANAATAFR-GASNGHVSRGRMSHVQLPLPLAQFGEQGEFLEVVKLE--GHSAVQ 539

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSG-KET 574
            +++ RD FLLQLCSG++E AVG  A+L+FAPIDA+ ++D PLLPSGFR+IP+DS   + 
Sbjct: 540 HSVLSRDSFLLQLCSGIEEGAVGAGAQLVFAPIDAAVSEDIPLLPSGFRVIPVDSSVVDG 599

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
              NRTLDLAS LE   AG    +  + +S+ +RSV+TIAF+FA+E H +E  A MARQY
Sbjct: 600 IGLNRTLDLASTLEDHEAGLNGESKSNGSSSQVRSVLTIAFQFAYEVHTRETCAVMARQY 659

Query: 635 VRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
           VR++++SVQRVA+AL+P    S+   R  LG  +A++LAR I  SYR  LG+DL++    
Sbjct: 660 VRTVVASVQRVAMALAP----SRGQPRPALGNSDAISLARHILSSYRVQLGMDLVRPEVG 715

Query: 695 GSESILKNLWHHTDAVMCCSLK 716
           G+E++ K  WHH+DA++CC+ K
Sbjct: 716 GTEALFKVFWHHSDAIVCCAWK 737


>gi|89514859|gb|ABD75304.1| class III homeodomain-leucine zipper protein C3HDZ3 [Psilotum
           nudum]
          Length = 856

 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/861 (50%), Positives = 578/861 (67%), Gaps = 65/861 (7%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           KDGK G  D GKYVRYT EQV+ LERLY+ECP PSS RR QL+++CPILSNIEPKQIKVW
Sbjct: 7   KDGKLG--DPGKYVRYTHEQVQLLERLYNECPNPSSFRRLQLLKDCPILSNIEPKQIKVW 64

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY------------- 112
           FQNRRCR+KQRKE+SRL ++N KL+AMN++L+EEN +L KQ  QLV              
Sbjct: 65  FQNRRCRDKQRKESSRLVSLNEKLSAMNQVLVEENGQLSKQAIQLVLQNKQLRQQLQQLK 124

Query: 113 --------ENGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQ-HPPRDASPAGLLSIAE 163
                   + G   +  +    A  +TS +SVVTSG  HL+P  HP  DA P  L++IAE
Sbjct: 125 SCSAGSECKRGSLDKLQEKLAAAATETSSDSVVTSGLRHLSPTFHPAHDAGPTRLMAIAE 184

Query: 164 ETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEI 223
           +TLTEFL+KATGTAV+W+QMPGMKPGPDS+GIVAISHGC G+AARACGLVGLEP ++A++
Sbjct: 185 DTLTEFLAKATGTAVDWIQMPGMKPGPDSIGIVAISHGCDGIAARACGLVGLEPFKIAKL 244

Query: 224 LKDRPR------------------GSAI------LYALTTLAPARDFWLLRYTSVLEDGS 259
           LKDR                    G  +      +Y  TTLA  RDF  LRYTS LE  +
Sbjct: 245 LKDRTSWLRDCRRMDVLAEFNTDAGGLLELLYIQMYTPTTLALPRDFCTLRYTSFLEGRN 304

Query: 260 LVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPE 319
           +VVCER+   +   PT+ PV+HFVRAEM  SG+LIR     GSI+HIVDH+DL+P SVPE
Sbjct: 305 VVVCERTFPVVNGVPTVAPVEHFVRAEMKSSGFLIRSYGSVGSIVHIVDHLDLQPGSVPE 364

Query: 320 VLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEA 379
           VLRPLY+S +VLAQ  T+ ALR L+ + QE       G G +   +R L QR++R FNEA
Sbjct: 365 VLRPLYDSPSVLAQNMTVGALRYLQSLGQEAEADLALGQGLQLPVIRTLCQRMARSFNEA 424

Query: 380 VNGFTDEGWTVMGNDGMDDVTVLVNSS-PDKLMGLNLSFANGFPAVSNAVLCAKASMLLQ 438
           VN   D+GW+ + +DGMDDV+++VN+S      G  LS ++   +++  VLCAK SMLLQ
Sbjct: 425 VNSLPDDGWSSLASDGMDDVSIVVNASVSSGFSGQQLSLSDKLLSINGGVLCAKTSMLLQ 484

Query: 439 NVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPG-SRVGTFGSQVILPLAHTIE 497
           NVPPA+L+RFLREHRSEWAD+ +D    A I      + G  R+G   + V L LAH++E
Sbjct: 485 NVPPALLIRFLREHRSEWADSEVDAEGTATIGSTIYDVSGFGRLGVSYAPVPLLLAHSLE 544

Query: 498 HEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAP 557
            E  +E++++E      + A++P+D FL+QLC+G+DE+ VG  A+L+FAP++ S ++D P
Sbjct: 545 QEL-LELLQMECSAFVQDGAVLPKDQFLMQLCTGLDESPVGASAQLVFAPVNVSISEDMP 603

Query: 558 LLPSGFRIIPLDSG-KETSSPNRTLDLASALEIG-----PAGNRATNNYSTNSTCMRSVM 611
           LLPSGFR++PLD+   +    +RTLDLASALE G     P G+   + + +     RS++
Sbjct: 604 LLPSGFRVVPLDNNLLDGYGASRTLDLASALEGGSGVVTPVGDSGISTFPS-----RSIL 658

Query: 612 TIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALT 671
           TIAF+F  E H  E VA+ AR+Y+R+I++SV RVA+AL P N+SS+ G R   GTPE L 
Sbjct: 659 TIAFQFPCEVHSYEIVASFARKYLRTIVASVLRVAMALVP-NLSSKFGQRQLPGTPELLM 717

Query: 672 LARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDM 731
           L + I  +YR + GVDL++  +       K LWHH DA+ C   K+ P   FANQ+GLDM
Sbjct: 718 LVQRILQAYREWFGVDLMRGHTATINGSFKLLWHHPDAIFCYVWKSFPDIIFANQSGLDM 777

Query: 732 LETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVA 791
           LETT  ALQ ++ +K  D++GRK  ++EF  +MQQGF  L  G+ LSS GRP +YERA+A
Sbjct: 778 LETTPDALQTVSWDKTLDENGRKTAYSEFADVMQQGFGYLPAGMRLSSTGRPAAYERAIA 837

Query: 792 WKVLNEEETAHCICFMFINWS 812
           W+V  + ET  C  FM++NWS
Sbjct: 838 WRV--DSETMQCAAFMYLNWS 856


>gi|302805045|ref|XP_002984274.1| hypothetical protein SELMODRAFT_180804 [Selaginella moellendorffii]
 gi|300148123|gb|EFJ14784.1| hypothetical protein SELMODRAFT_180804 [Selaginella moellendorffii]
          Length = 836

 Score =  827 bits (2137), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/867 (50%), Positives = 569/867 (65%), Gaps = 87/867 (10%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M  KD      D GKY+RYTPEQVEALER+YHECPKPSSIRRQQ++R+ P+L NIEP+QI
Sbjct: 1   MKVKD--KSDFDTGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLGNIEPRQI 58

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ--- 119
           KVWFQNRRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  EN   RQ   
Sbjct: 59  KVWFQNRRCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLALENQCLRQQLQ 118

Query: 120 ----------------------HTQSTTLATKDTSCESVVTSG--QH-HLTPQHPPRDAS 154
                                 + Q + LA  D S +S VT G  QH  +TPQ  PRD+S
Sbjct: 119 QIRSGGGAADPDKKSAAAADRFNDQQSALALADRSPDSEVTGGVPQHLAITPQS-PRDSS 177

Query: 155 PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK--PGPDSVGIVAISHGCSGVAARACGL 212
           PAGLLSIAEETL  FL+KATGTAV+W+Q+PGMK  PGPDS+G  AISH  +G+AARA GL
Sbjct: 178 PAGLLSIAEETLNSFLAKATGTAVDWIQIPGMKACPGPDSIGTAAISHAGAGIAARAWGL 237

Query: 213 VGLEPTRVAEILKDR------------------PRGSAI------LYALTTLAPARDFWL 248
           V LEP RVAEILKDR                  P G  +      +YA TTLAPARDFW 
Sbjct: 238 VELEPIRVAEILKDRPSWLWDCRRLEVVGSFPTPNGGTLELVYTQMYAPTTLAPARDFWT 297

Query: 249 LRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVD 308
           LRYT  LED SL VCERSL  I N P +     F RAEMLPSG+LIRP EGG S IH+VD
Sbjct: 298 LRYTIFLEDRSLAVCERSLTGIHNKPAIKN-GDFERAEMLPSGFLIRPYEGGVSSIHVVD 356

Query: 309 HMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRAL 368
           H DLE W V EVLRPLYESS +LAQ+ T+ AL  L++++QE +   +   G++PAALRA 
Sbjct: 357 HWDLESWKVLEVLRPLYESSVILAQRVTLGALHHLKRISQESSGEVLMRGGQQPAALRAF 416

Query: 369 SQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAV 428
           S R++RGFN+AVN F ++GWT   +DG DDVT+ +N++            + F A    +
Sbjct: 417 SHRIARGFNDAVNAFAEDGWT---SDGGDDVTISINTA-LGAKAAGAQGGDRFCAF-GGI 471

Query: 429 LCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQV 488
           LCAK+SMLLQNVP A L+RFLREHRSEWA  NI   S + +K+G     G+  G    + 
Sbjct: 472 LCAKSSMLLQNVPAATLIRFLREHRSEWAGVNIASDSVSTLKIGGY---GTSKGNADEEC 528

Query: 489 ILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPI 548
           + P        E +EVIK+EG G    + ++P+D  LLQLC+G ++ A GTCA+L+FAP+
Sbjct: 529 LFP--------ELLEVIKMEGYG----NGMLPKDTVLLQLCTGYEDTASGTCAQLVFAPV 576

Query: 549 DASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMR 608
           D + ++D PLLPSGFR+IPLD+G + S+ +RTLDL S LE    G +  +++S +   MR
Sbjct: 577 DPAVSNDIPLLPSGFRVIPLDNGLDASALSRTLDLTSTLEGSADGGKFPDDFSGSGGNMR 636

Query: 609 SVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNIS-SQAGLRTPLGTP 667
           SV+T+AF+F FE+H +E +   ARQYVR+++ SVQ +A+AL+   +S  Q G +      
Sbjct: 637 SVLTMAFQFVFEAHNREEIIASARQYVRNVMVSVQSIAMALASYRLSPPQQGPK----QQ 692

Query: 668 EALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQA 727
           EA   A  I  SYR    V+  +S  E +++     WH  +A++CC+ KA+P F FAN+A
Sbjct: 693 EAKIFALQIMRSYRASFNVEFNESQPESTDA----FWHDKNAILCCTWKAIPEFIFANRA 748

Query: 728 GLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYE 787
           GL+M+ETT   L  +  E+ FD  GR+  +++F Q++ QG+A L GGI LSS G PV+Y+
Sbjct: 749 GLEMMETTWRDLHSLPYERTFDATGRETAYSDFAQVIHQGYAYLHGGIRLSSKGHPVTYD 808

Query: 788 RAVAWKVLNEEETAHCICFMFINWSFV 814
           RA+AWKV +++    CI FMF +WS V
Sbjct: 809 RAMAWKVFDDDGAVVCIAFMFTDWSIV 835


>gi|302781336|ref|XP_002972442.1| hypothetical protein SELMODRAFT_270954 [Selaginella moellendorffii]
 gi|110349518|gb|ABG73234.1| class III HD-Zip protein HDZ32 [Selaginella moellendorffii]
 gi|300159909|gb|EFJ26528.1| hypothetical protein SELMODRAFT_270954 [Selaginella moellendorffii]
          Length = 840

 Score =  826 bits (2133), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/871 (50%), Positives = 568/871 (65%), Gaps = 91/871 (10%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M  KD      D GKY+RYTPEQVEALER+YHECPKPSSIRRQQ++R+ P+L NIEP+QI
Sbjct: 1   MKVKD--KSDFDTGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLGNIEPRQI 58

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  EN   RQ  Q
Sbjct: 59  KVWFQNRRCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLALENQCLRQQLQ 118

Query: 123 ------------------------STTLATKDTSCESVVTSG--QH-HLTPQHPPRDASP 155
                                    + LA  D S +S VT G  QH  +TPQ  PRD+SP
Sbjct: 119 QIRSGGGAADPDKKSAAAADRFNDQSALALADRSPDSEVTGGVPQHLAITPQS-PRDSSP 177

Query: 156 AGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGL 215
           AGLLSIAEETL  FL+KATGTAV+W+Q+PGMKPGPDS+G  AISH  +G+AARA GLV L
Sbjct: 178 AGLLSIAEETLNSFLAKATGTAVDWIQIPGMKPGPDSIGTAAISHAGAGIAARAWGLVEL 237

Query: 216 EPTRVAEILKDR------------------PRGSAI------LYALTTLAPARDFWLLRY 251
           EP RVAEILKDR                  P G  +      +YA TTLAPARDFW LRY
Sbjct: 238 EPIRVAEILKDRPSWLWDCRRLEVVGSFPTPNGGTLELVYTQMYAPTTLAPARDFWTLRY 297

Query: 252 TSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMD 311
           T  LED SL VCERSL  I N P +     F RAEMLPSG+LIRP EGG S IH+VDH D
Sbjct: 298 TIFLEDRSLAVCERSLTGIHNKPAIKN-GDFERAEMLPSGFLIRPYEGGVSSIHVVDHWD 356

Query: 312 LEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQR 371
           LE W V EVLRPLYESS +LAQ+ T+ AL  L++++QE +   +   G++PAALRA S R
Sbjct: 357 LESWKVLEVLRPLYESSVILAQRVTLGALHHLKRISQESSGEVLMRGGQQPAALRAFSHR 416

Query: 372 LSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCA 431
           ++RGFN+AVN F ++GWT   +DG DDVT+ +N++            + F A    +LCA
Sbjct: 417 IARGFNDAVNAFAEDGWT---SDGGDDVTISINTA-LGAKAAGAQGGDRFCAF-GGILCA 471

Query: 432 KASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILP 491
           K+SMLLQNVP A L+RFLREHRSEWA  NI   S + +K+G     G+  G    + + P
Sbjct: 472 KSSMLLQNVPAATLIRFLREHRSEWAGVNIASDSVSTLKIGGY---GTSKGNADEECLFP 528

Query: 492 LAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDAS 551
                   E +EVIK+EG G    + ++P+D  LLQLC+G ++ A GTCA+L+FAP+D +
Sbjct: 529 --------ELLEVIKMEGYG----NGMLPKDTVLLQLCTGYEDTASGTCAQLVFAPVDPA 576

Query: 552 FADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVM 611
            ++D PLLPSGFR+IPLD+G + S+ +RTLDL S LE    G +  +++S +   MRSV+
Sbjct: 577 VSNDIPLLPSGFRVIPLDNGLDASALSRTLDLTSTLEGSADGGKFPDDFSGSGGNMRSVL 636

Query: 612 TIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNIS-SQAGLRTPLGTPEAL 670
           T+AF+F FE+H +E +   ARQYVR+++ SVQ +A+AL+   +S  Q G +      EA 
Sbjct: 637 TMAFQFVFEAHNREEIIASARQYVRNVMVSVQSIAMALASYRLSPPQQGPK----QQEAK 692

Query: 671 TLARWICHSY-------RCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTF 723
             A  I  SY       R    V+  +S  E +++     WH  +A++CC+ KA+P F F
Sbjct: 693 IFALQIMRSYSLGLQRCRASFNVEFNESQPESTDA----FWHDKNAILCCTWKAIPEFIF 748

Query: 724 ANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRP 783
           AN+AGL+M+ETT   L  +  E+ FD  GR+  +++F Q++ QG+A L GGI LSS G P
Sbjct: 749 ANRAGLEMMETTWRDLHSLPYERTFDATGRETAYSDFAQVIHQGYAYLHGGIRLSSKGHP 808

Query: 784 VSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           V+Y+RA+AWKV +++    CI FMF +WS V
Sbjct: 809 VTYDRAMAWKVFDDDGAVVCIAFMFTDWSIV 839


>gi|325651485|dbj|BAJ83628.1| class III HD-Zip protein [Cabomba caroliniana]
          Length = 703

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/704 (62%), Positives = 521/704 (74%), Gaps = 33/704 (4%)

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 119
           KQIKVWFQNRR REKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENG  + 
Sbjct: 1   KQIKVWFQNRRRREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGNMK- 59

Query: 120 HTQSTTLATKDTSCESVVTSGQH--HLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGT 176
           H   T L T DTSCESVVTSGQH  + + QHPPR  S PAGLLSIAE TL EFLSKATGT
Sbjct: 60  HQLHTPLMTTDTSCESVVTSGQHQPNTSTQHPPRGTSNPAGLLSIAEVTLAEFLSKATGT 119

Query: 177 AVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR--------- 227
           +V+WVQM GMKPGPDSVGIVA+S   +GVAARACGLV LEP++VAEILKDR         
Sbjct: 120 SVDWVQMLGMKPGPDSVGIVAVSRNSNGVAARACGLVSLEPSKVAEILKDRMSWYRDCRS 179

Query: 228 -------PRGSA--------ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQN 272
                  P G+           YA TTLA ARDFW LRYT  +EDGSLVVC+RSL     
Sbjct: 180 LDVLTVLPSGNGGTIELIYMQTYAPTTLASARDFWTLRYTIGMEDGSLVVCQRSLTASTG 239

Query: 273 GPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLA 332
           GP+     +FVRAEMLPSG LIRPCE GGS +HIVDH+DL+ WSVPEVLRPLYESS +LA
Sbjct: 240 GPSGSTTPNFVRAEMLPSGCLIRPCEVGGSTVHIVDHIDLDAWSVPEVLRPLYESSKILA 299

Query: 333 QKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMG 392
           QK T+ ALR +RQ+A E +  +    GR+PA LR  SQRLSRGFN+AVN F+++GW++M 
Sbjct: 300 QKMTLVALRHIRQVAHETSDEAGYSTGRQPAVLRTFSQRLSRGFNDAVNCFSEDGWSLMN 359

Query: 393 NDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH 452
           +DG++DVT+ VN+SP K +  + S           VLCAKASMLLQNVPPAIL+RFLREH
Sbjct: 360 SDGVEDVTIAVNASPSKNLVGHFSSTMPLLVSGGGVLCAKASMLLQNVPPAILVRFLREH 419

Query: 453 RSEWADNNIDVYSAAAIKVGPCSL--PGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGV 510
           RSEWAD  ID +SAA+ K  PC    P +  G  G Q  LPL H ++ EE +EVI+LEG 
Sbjct: 420 RSEWADCGIDAFSAASFKGNPCDFGGPTNFSGLSGGQTALPLGHMLDKEELLEVIRLEGH 479

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
           G SP   ++P DM+LLQLCSG+DENA G CA+L+FAPID +FADDAPLLPSGFR+I L+ 
Sbjct: 480 GFSPVAGVLPSDMYLLQLCSGIDENAAGACAQLVFAPIDETFADDAPLLPSGFRVISLEP 539

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
             +  S NRTLDLAS LE+G   NRA ++ + NS   RSV+TIAF+F +E+H+++ VA M
Sbjct: 540 KTDIPSLNRTLDLASTLELGSGANRAHSDNAANSYSFRSVLTIAFQFTYENHLRDTVAAM 599

Query: 631 ARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLK 690
           ARQYVRS++SSVQRVA+A+ PS +SS    ++   +PEALTLARW   SYR + G++L +
Sbjct: 600 ARQYVRSVVSSVQRVAMAIVPSRLSSLDSSKSFSRSPEALTLARWTSRSYRLHSGMELFR 659

Query: 691 SSS-EGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDM 731
           ++  +  ES+LK LWHH DA++CCSLK  A P FTFANQAG DM
Sbjct: 660 AADGQDGESVLKLLWHHGDAILCCSLKNNASPFFTFANQAGFDM 703


>gi|255564395|ref|XP_002523194.1| conserved hypothetical protein [Ricinus communis]
 gi|223537601|gb|EEF39225.1| conserved hypothetical protein [Ricinus communis]
          Length = 771

 Score =  820 bits (2117), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/612 (67%), Positives = 477/612 (77%), Gaps = 35/612 (5%)

Query: 1   MAMSCKDGKTGS----LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSN 56
           MA+S  + K  +    +D+ KYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSN
Sbjct: 3   MALSMHNIKEANSNKQMDSSKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSN 62

Query: 57  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGY 116
           IEPKQIKVWFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LVYENGY
Sbjct: 63  IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGY 122

Query: 117 FRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPP----RDAS-PAGLLSIAEETLTEFLS 171
            RQ  Q+ +  T D SCESVV +GQ        P    RDA+ PAGLL+IAEETL EFLS
Sbjct: 123 MRQQLQTASATTTDNSCESVVINGQQQQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLS 182

Query: 172 KATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP--- 228
           KATGTAV+WVQM GMKPGPDS+GIVA+S  CSGVAARACGLV LEPT+VAEILKDRP   
Sbjct: 183 KATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWF 242

Query: 229 ---------------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSL 267
                           G  I       YA TTLA AR+FW LRYT+ LEDGSLV+CERSL
Sbjct: 243 RDCRCLDTLSVIPTGNGGTIELIYMQTYAPTTLAAAREFWTLRYTTTLEDGSLVICERSL 302

Query: 268 KNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYES 327
                GPT PP   FVRAEMLPSGYLIRPCEGGGSIIHIVDH+DL+ WSVPEVLRPLYES
Sbjct: 303 TTTTGGPTGPPASSFVRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYES 362

Query: 328 STVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEG 387
           S +LAQK TMAALR +RQ+AQE +     G GR+PA LR  SQRL RGFN+AVNGF+D+G
Sbjct: 363 SKILAQKMTMAALRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFSDDG 422

Query: 388 WTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLR 447
           W+++G DG++DVT+++NS+P+K +G   +  + FP     VLCAKASMLLQNVPPA+L+R
Sbjct: 423 WSLLGGDGVEDVTIVINSTPNKFLGSQYT-TSMFPTFGGGVLCAKASMLLQNVPPALLVR 481

Query: 448 FLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIK 506
           FLREHRSEWAD  +D YSAA +K  P ++P +R G F  SQVILPLAHT+EHEEF+EV++
Sbjct: 482 FLREHRSEWADYGVDTYSAACLKASPYAVPCARPGGFPSSQVILPLAHTVEHEEFLEVVR 541

Query: 507 LEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRII 566
           LEG   SPED  + RDM+LLQLCSG+DENAVG CA+L+FAPID SFADDAPLLPSGFR+I
Sbjct: 542 LEGHAFSPEDVALARDMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAPLLPSGFRVI 601

Query: 567 PLDSGKETSSPN 578
           PLD   +  +P 
Sbjct: 602 PLDPKTDGPAPT 613



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 94/159 (59%), Positives = 120/159 (75%), Gaps = 6/159 (3%)

Query: 662 TPLGTPEALTLARWICHSYRCYL----GVDLLKSSSEGSESILKNLWHHTDAVMCCSLK- 716
           TP+   + +     +CH    YL    G +L +   +  +++LK LWHH+DA+MCCSLK 
Sbjct: 613 TPMTVEKVMHCYTQVCHFQWHYLVIHTGGELFRVDPQAGDALLKQLWHHSDAIMCCSLKT 672

Query: 717 -ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGI 775
            A PVFTFANQAGLDMLETTLVALQDI L+KI D+ GRK L +EF +IMQQGFA L  GI
Sbjct: 673 NASPVFTFANQAGLDMLETTLVALQDIMLDKILDEAGRKVLCSEFSKIMQQGFAYLPAGI 732

Query: 776 CLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           C+SSMGRPVSY++A+AWKVLN++++ HC+ FMF+NWSFV
Sbjct: 733 CVSSMGRPVSYDQAIAWKVLNDDDSNHCLAFMFMNWSFV 771


>gi|89514861|gb|ABD75305.1| class III homeodomain-leucine zipper protein C3HDZ1 [Ceratopteris
           richardii]
          Length = 844

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/853 (50%), Positives = 573/853 (67%), Gaps = 49/853 (5%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MA+S         D+ KYVRYT EQV+ALERLY ECP PSS RR QL+RECPILS IEPK
Sbjct: 1   MAVSKMKDARSLADSCKYVRYTQEQVQALERLYAECPNPSSFRRLQLLRECPILSKIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ- 119
           QIKVWFQN  CR+KQRKEASRL  +N KL+AMN++L+EEN+ L KQ  QLV +N   R+ 
Sbjct: 61  QIKVWFQNGGCRDKQRKEASRLANLNEKLSAMNRVLVEENESLSKQAIQLVLQNQKIRKQ 120

Query: 120 ------HTQSTTL-----ATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTE 168
                 H  S  L     ++ + S +SVVT+  +H T Q P RDA P  L +IAEETL E
Sbjct: 121 LKQLHCHESSVKLDQNGLSSTENSSDSVVTNIMNHQTLQLP-RDAGPLRLAAIAEETLAE 179

Query: 169 FLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP 228
           FL+KATGTAVEW+QMPGMKPGPDS+GIVA+S G +G+AARACGLVGL+P ++ E+LK+RP
Sbjct: 180 FLAKATGTAVEWIQMPGMKPGPDSIGIVAVSDGSNGIAARACGLVGLDPAKIVELLKNRP 239

Query: 229 ------------------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCE 264
                              G  +       YA TTLA  RDF+ LRYT+VL+D ++VVCE
Sbjct: 240 LWLSDCRRMEVVGTCTSTSGGMVELLYMQFYAPTTLAMPRDFYTLRYTTVLDDCNVVVCE 299

Query: 265 RSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPL 324
           RSL      P +PP   FVRA+M  SGYLIRP  G GSI+++VDHMDL+P +VPEVLRPL
Sbjct: 300 RSLPLSHGDPVLPPPDQFVRAKMHSSGYLIRPYGGVGSIVYLVDHMDLQPETVPEVLRPL 359

Query: 325 YESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFT 384
           YESS VLAQ+ TM A+R LR +A +V   S    G +PA +R L+QR++RGFNEA+N  +
Sbjct: 360 YESSPVLAQRVTMGAMRYLRTVAHDVDGDSSPVRGLQPAVIRTLTQRMARGFNEAINCLS 419

Query: 385 DEGWTVMGNDGMDDVTVLVNSSP-DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPA 443
           D+GW+ M +DGMDDVT+ VN+ P  ++      F +  PA S+ VLCAK SMLLQNVPPA
Sbjct: 420 DDGWSSMPSDGMDDVTIAVNTYPVSRISQGQFLFCDRLPAASDGVLCAKTSMLLQNVPPA 479

Query: 444 ILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSR-VGTFGSQVILPLAHTIEHEEFM 502
           +L+RFLREHRSEWAD  ++V +  A  +G   L   R V  +GS  +L L+H+ E  E +
Sbjct: 480 LLIRFLREHRSEWAD--LEVCTDIAASLGHAPLASRRGVSCYGSAPLL-LSHSPEQRELL 536

Query: 503 EVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSG 562
           E+++++      +     +D FLLQLC+G+DE +VG  A+L+FAP+  S ++D PL+ SG
Sbjct: 537 ELLQMDSPTVFQDGGFYAKDNFLLQLCTGLDEASVGASAQLVFAPVSVSVSEDMPLVSSG 596

Query: 563 FRIIPLDSGKETSSP-NRTLDLASALEIGPAGNRATNNYSTNSTC-MRSVMTIAFEFAFE 620
           FR++PLDS         RTLDLAS LE G  G   + +     TC MRS++TIAF+F  E
Sbjct: 597 FRVVPLDSSLANEHEMARTLDLASVLESG--GRIISPSADKGPTCPMRSILTIAFQFPCE 654

Query: 621 SHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSY 680
               E VAT+AR+YVR++++S+ RVA+AL+ SN+S  A L+   GTPE L L + +  SY
Sbjct: 655 IQTFECVATLARKYVRTVVASILRVAMALA-SNLSPPADLKQTPGTPELLILVQRMLQSY 713

Query: 681 RCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQ 740
             + G++LLK  SE  +++ K LWHH DA++CC +KA P   FANQ+GLDMLET+   L+
Sbjct: 714 ESHFGIELLKGHSESIDTLFKLLWHHPDAILCCIVKASPELIFANQSGLDMLETSSNELR 773

Query: 741 DITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEET 800
            +  +K+ D++ RK+   E  +++Q+GFA L  G+ +S+ GR  ++ER VAWKV    E 
Sbjct: 774 TLDWQKMLDENERKSFCTELDEVLQRGFAYLPRGVRISATGRVATFERGVAWKV--HSEM 831

Query: 801 AHCICFMFINWSF 813
             C+ +MF+ WSF
Sbjct: 832 PECLAYMFVKWSF 844


>gi|90110444|gb|ABD90524.1| class III homeodomain-leucine zipper [Selaginella kraussiana]
          Length = 820

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/861 (50%), Positives = 559/861 (64%), Gaps = 90/861 (10%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M     K G LD+GKY+RYTPEQVEALER+YHECPKPSSIRRQQ++R+ P+L+NIEP+QI
Sbjct: 1   MRMTKDKGGDLDSGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEPRQI 60

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE--------- 113
           KVWFQNRRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  +         
Sbjct: 61  KVWFQNRRCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLSLDNQLLRQQLQ 120

Query: 114 --------NGYFRQHTQSTTLATKDTSCESVVTSG--QHHLT--PQHPPRDASPAGLLSI 161
                   +           LA  D S +S VT G   HHLT  PQ  PRD+SPAGLLSI
Sbjct: 121 QLRNNQDPDRKSSDRLNDQALALADRSPDSEVTGGVPHHHLTMAPQS-PRDSSPAGLLSI 179

Query: 162 AEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVA 221
           AEETL  FL+KATGT V+W+Q+PGMKPGPDS+   AISHG +GVAARA GLV LEP RVA
Sbjct: 180 AEETLNSFLAKATGTLVDWIQIPGMKPGPDSISAAAISHGSAGVAARAVGLVDLEPIRVA 239

Query: 222 EILKDR------------------PRGSAI------LYALTTLAPARDFWLLRYTSVLED 257
           EILKDR                  P G  +      +YA TTLAPARDFW LRYT  LED
Sbjct: 240 EILKDRPSWLWDCRRLEVVGTFPTPNGGTLELIYSRMYAPTTLAPARDFWTLRYTIFLED 299

Query: 258 GSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 317
            SLVVCE+SL          P   F RAEMLPSG+LIRP EGG S IHIVDH DLE W V
Sbjct: 300 RSLVVCEKSLTGAHGKHKGGP--DFERAEMLPSGFLIRPYEGGVSSIHIVDHYDLESWRV 357

Query: 318 PEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFN 377
            EVLRPLYESS  LAQ+ T+AAL+ L++++QE +   +   G++PAALRA S R++RGFN
Sbjct: 358 LEVLRPLYESSVFLAQRVTIAALQHLKRISQESSGEILLRGGQQPAALRAFSHRIARGFN 417

Query: 378 EAVNGFTDEGWTVMGNDGMDDVTVLVNSS-PDKLMGLNLSFANGFPAVSNAVLCAKASML 436
           +AVNGF ++GW  +  DG+D V++ +N+S   K +  N  + + F    + +LCAK+SML
Sbjct: 418 DAVNGFAEDGWVSLVADGIDTVSITINTSVASKALPGNQVWPDRFSNNISGILCAKSSML 477

Query: 437 LQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTI 496
           LQNVPPA L+RFLREHRSEW   N    SA +  V        R+  +G+      +   
Sbjct: 478 LQNVPPATLIRFLREHRSEWVGCN----SATSDSVSAL-----RISGYGT------SKGD 522

Query: 497 EHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDA 556
           E  E +EVIK+EG G       +P+D  LLQLC+G  +N  GTCA+LIFAP+D +  +D 
Sbjct: 523 EEPELLEVIKMEGYGSQS----VPKDTVLLQLCTGYTDNVSGTCAQLIFAPVDPAVTNDM 578

Query: 557 PLLPSGFRIIPLDSGKETSSPNR---TLDLASALEIGPAGNRATNNYSTNSTCMRSVMTI 613
           PLLPSGFR+IPLDSG  ++ P +   TLDLAS L+     +      S+++ C RSV+T+
Sbjct: 579 PLLPSGFRVIPLDSG--SALPTKLAPTLDLASTLDTAKFPDD-----SSSAHC-RSVLTM 630

Query: 614 AFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLA 673
           AF+F FE+H +E + + ARQYVR+++ SVQ +A+AL+   +S Q G +     PEA  +A
Sbjct: 631 AFQFVFEAHNREEIISSARQYVRNVMVSVQSIAMALASFRMSPQQGPK----QPEARIIA 686

Query: 674 RWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLE 733
             I   +R   GV+L   S++         W+  DA++CC+ KA+P F FAN++GL+M+E
Sbjct: 687 EQIVRGFRSSFGVELSDGSTDA-------FWNEKDAILCCTWKAIPEFIFANRSGLEMME 739

Query: 734 TTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWK 793
           TT   L  +  E+ FD  GR+  +++F Q++ QG+A L GG+ +SS G  V+Y+ A AWK
Sbjct: 740 TTWRDLHSLPYERTFDSAGRETAYSDFAQVLHQGYAQLPGGVRISSKGHTVAYDSATAWK 799

Query: 794 VLNEEETAHCICFMFINWSFV 814
           V +EE    CI FMF NW+ +
Sbjct: 800 VYDEEGNVTCIAFMFTNWTIL 820


>gi|110349514|gb|ABG73232.1| class III HD-Zip protein HDZ32 [Selaginella kraussiana]
          Length = 820

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/861 (50%), Positives = 559/861 (64%), Gaps = 90/861 (10%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M     K G LD+GKY+RYTPEQVEALER+YHECPKPSSIRRQQ++R+ P+L+NIEP+QI
Sbjct: 1   MRMTKDKGGDLDSGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEPRQI 60

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE--------- 113
           KVWFQNRRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  +         
Sbjct: 61  KVWFQNRRCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLSLDNQLLRQQLQ 120

Query: 114 --------NGYFRQHTQSTTLATKDTSCESVVTSG--QHHLT--PQHPPRDASPAGLLSI 161
                   +           LA  D S +S VT G   HHLT  PQ  PRD+SPAGLLSI
Sbjct: 121 QLRNNQDPDRKSSDRLNDQALALADRSPDSEVTGGVPHHHLTMAPQS-PRDSSPAGLLSI 179

Query: 162 AEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVA 221
           AEETL  FL+KATGT V+W+Q+PGMKPGPDS+   AISHG +GVAARA GLV LEP RVA
Sbjct: 180 AEETLNSFLAKATGTLVDWIQIPGMKPGPDSISAAAISHGSAGVAARAVGLVDLEPIRVA 239

Query: 222 EILKDR------------------PRGSAI------LYALTTLAPARDFWLLRYTSVLED 257
           EILKDR                  P G  +      +YA TTLAPARDFW LRYT  LED
Sbjct: 240 EILKDRPSWLWDCRRLEVVGTFPTPNGGTLELIYSQMYAPTTLAPARDFWTLRYTIFLED 299

Query: 258 GSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 317
            SLVVCE+SL          P   F RAEMLPSG+LIRP EGG S IHIVDH DLE W V
Sbjct: 300 RSLVVCEKSLTGAHGKHKGGP--DFERAEMLPSGFLIRPYEGGVSSIHIVDHYDLESWRV 357

Query: 318 PEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFN 377
            EVLRPLYESS  LAQ+ T+AAL+ L++++QE +   +   G++PAALRA S R++RGFN
Sbjct: 358 LEVLRPLYESSVFLAQRVTIAALQHLKRISQESSGEILLRGGQQPAALRAFSHRIARGFN 417

Query: 378 EAVNGFTDEGWTVMGNDGMDDVTVLVNSS-PDKLMGLNLSFANGFPAVSNAVLCAKASML 436
           +AVNGF ++GW  +  DG+D V++ +N+S   K +  N  + + F    + +LCAK+SML
Sbjct: 418 DAVNGFAEDGWVSLVADGIDTVSITINTSVASKALPGNQVWPDRFSNNISGILCAKSSML 477

Query: 437 LQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTI 496
           LQNVPPA L+RFLREHRSEW   N    SA +  V        R+  +G+      +   
Sbjct: 478 LQNVPPATLIRFLREHRSEWVGCN----SATSDSVSAL-----RISGYGT------SKGD 522

Query: 497 EHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDA 556
           E  E +EVIK+EG G       +P+D  LLQLC+G  +N  GTCA+LIFAP+D +  +D 
Sbjct: 523 EEPELLEVIKMEGYGSQS----VPKDTVLLQLCTGYTDNVSGTCAQLIFAPVDPAVTNDM 578

Query: 557 PLLPSGFRIIPLDSGKETSSPNR---TLDLASALEIGPAGNRATNNYSTNSTCMRSVMTI 613
           PLLPSGFR+IPLDSG  ++ P +   TLDLAS L+     +      S+++ C RSV+T+
Sbjct: 579 PLLPSGFRVIPLDSG--SALPTKLAPTLDLASTLDTAKFPDD-----SSSAHC-RSVLTM 630

Query: 614 AFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLA 673
           AF+F FE+H +E + + ARQYVR+++ SVQ +A+AL+   +S Q G +     PEA  +A
Sbjct: 631 AFQFVFEAHNREEIISSARQYVRNVMVSVQSIAMALASFRMSPQQGPK----QPEARIIA 686

Query: 674 RWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLE 733
             I   +R   GV+L   S++         W+  DA++CC+ KA+P F FAN++GL+M+E
Sbjct: 687 EQIVRGFRSSFGVELSDGSTDA-------FWNEKDAILCCTWKAIPEFIFANRSGLEMME 739

Query: 734 TTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWK 793
           TT   L  +  E+ FD  GR+  +++F Q++ QG+A L GG+ +SS G  V+Y+ A AWK
Sbjct: 740 TTWRDLHSLPYERTFDSAGRETAYSDFAQVLHQGYAQLPGGVRISSKGHTVAYDSATAWK 799

Query: 794 VLNEEETAHCICFMFINWSFV 814
           V +EE    CI FMF NW+ +
Sbjct: 800 VYDEEGNVTCIAFMFTNWTIL 820


>gi|89514851|gb|ABD75300.1| class III homeodomain-leucine zipper protein C3HDZ1 [Selaginella
           kraussiana]
          Length = 820

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/863 (50%), Positives = 557/863 (64%), Gaps = 94/863 (10%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M     K G LD+GKY+RYTPEQVEALER+YHECPKPSSIRRQQ++R+ P+L+NIEP+QI
Sbjct: 1   MRMTKDKGGDLDSGKYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEPRQI 60

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE--------- 113
           KVWFQNRRCREKQRKE SRLQ+VN  LTAMNK++MEEN+RL K  SQL  +         
Sbjct: 61  KVWFQNRRCREKQRKETSRLQSVNSSLTAMNKIIMEENERLTKHSSQLSLDNQLLRQQLQ 120

Query: 114 --------NGYFRQHTQSTTLATKDTSCESVVTSG--QHHLT--PQHPPRDASPAGLLSI 161
                   +           LA  D S +S VT G   HHLT  PQ  PRD+SPAGLLSI
Sbjct: 121 QLRNNQDPDRKSSDRLNDQALALADRSPDSEVTGGVPHHHLTMAPQS-PRDSSPAGLLSI 179

Query: 162 AEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVA 221
           AEET   FL+KATGT V+W+Q+PGMKPGPDS+   AISHG +GVAARA GLV LEP RVA
Sbjct: 180 AEETPNSFLAKATGTLVDWIQIPGMKPGPDSISAAAISHGSAGVAARAVGLVDLEPIRVA 239

Query: 222 EILKDR------------------PRGSAI------LYALTTLAPARDFWLLRYTSVLED 257
           EILKDR                  P G  +      +YA TTLAPARDFW LRYT  LED
Sbjct: 240 EILKDRPSWLWDCRRLEVVGTFPTPSGGTLELIYSQMYAPTTLAPARDFWTLRYTIFLED 299

Query: 258 GSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 317
            SLVVCE+SL          P   F RAEMLPSG+LIRP EGG S IHIVDH DLE W V
Sbjct: 300 RSLVVCEKSLTGAHGKHKGGP--DFERAEMLPSGFLIRPYEGGVSSIHIVDHYDLESWRV 357

Query: 318 PEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFN 377
            EVLRPLYESS  LAQ+ T+AAL+ L++++QE +   +   G++PAALRA S R++RGFN
Sbjct: 358 LEVLRPLYESSVFLAQRVTIAALQHLKRISQESSGEILLRGGQQPAALRAFSHRIARGFN 417

Query: 378 EAVNGFTDEGWTVMGNDGMDDVTVLVNSS-PDKLMGLNLSFANGFPAVSNAVLCAKASML 436
           +AVNGF ++GW  +  DG+D V++ +N+S   K +  N  + + F    + +LCAK+SML
Sbjct: 418 DAVNGFAEDGWVSLVADGIDTVSITINTSVASKALPGNQVWPDRFSNNISGILCAKSSML 477

Query: 437 LQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTI 496
           LQNVPPA L+RFLREHRSEW   N    SA +  V        R+  +G+      +   
Sbjct: 478 LQNVPPATLIRFLREHRSEWVGCN----SATSDSVSAL-----RISGYGT------SKGD 522

Query: 497 EHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDA 556
           E  E +EVIK+EG G       +P+D  LLQLC+G  +N  GTCA+LIFAP+D +  +D 
Sbjct: 523 EEPELLEVIKMEGYGSQS----VPKDTVLLQLCTGYTDNVSGTCAQLIFAPVDPAVTNDM 578

Query: 557 PLLPSGFRIIPLDSGKETSSPNR---TLDLASALEIGPAGNRATNNYSTNSTCM--RSVM 611
           PLLPSGFR+IPLDSG  ++ P +   TLDLAS L+        T  +  +S+    RSV+
Sbjct: 579 PLLPSGFRVIPLDSG--SALPTKLAPTLDLASTLD--------TAKFPDDSSLAHCRSVL 628

Query: 612 TIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALT 671
           T+AF+F FE+H +E + + ARQYVR+++ SVQ +A+AL+   +S Q G +     PEA  
Sbjct: 629 TMAFQFVFEAHNREEIISSARQYVRNVMVSVQSIAMALASFRMSPQQGPK----QPEARI 684

Query: 672 LARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDM 731
           +A  I   +R   GV+L   S++         W+  DA++CC+ KA+P F FAN++GL+M
Sbjct: 685 IAEQIVRGFRSSFGVELSDGSTDA-------FWNEKDAILCCTWKAIPEFIFANRSGLEM 737

Query: 732 LETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVA 791
           +ETT   L  +  E+ FD  GR+  +++F Q++ QG+A L GG+ +SS G  V+Y+ A A
Sbjct: 738 METTWRDLHSLPYERTFDSAGRETAYSDFAQVLHQGYAQLPGGVRISSKGHTVAYDSATA 797

Query: 792 WKVLNEEETAHCICFMFINWSFV 814
           WKV +EE    CI FMF NW+ +
Sbjct: 798 WKVYDEEGNVTCIAFMFTNWTIL 820


>gi|224029377|gb|ACN33764.1| unknown [Zea mays]
          Length = 584

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/583 (65%), Positives = 475/583 (81%), Gaps = 5/583 (0%)

Query: 235 YALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLI 294
           YA TTLA  RDFW LRYTS LEDGSLV+CERSL     GP+ P   +FVRAE+LPSGYLI
Sbjct: 4   YAPTTLAAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFVRAEVLPSGYLI 63

Query: 295 RPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSS 354
           RPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYES  +LAQKTT+AALR +RQ+A E +   
Sbjct: 64  RPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKTTIAALRHIRQIAHESSGEM 123

Query: 355 VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLN 414
             G GR+PA LR  SQRLSRGFN+AVNGF D+GW++M +DG +DVT+ +NSSP+KL+G +
Sbjct: 124 PYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAEDVTIAINSSPNKLIGPH 183

Query: 415 LSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPC 474
           ++ +  F A+   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD  +D YSAAA++  P 
Sbjct: 184 VNSSQLFTAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAAALRASPY 243

Query: 475 SLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMD 533
           ++PG R   F GSQVILPLAHT+EHEEF+EVI+LEG     ++ ++ RDM+LLQLCSG+D
Sbjct: 244 AVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQLCSGVD 303

Query: 534 ENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAG 593
           ENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD+  +  S  RTLDLAS LE+G  G
Sbjct: 304 ENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDPPSGTRTLDLASTLEVGSGG 363

Query: 594 N-RATNNYSTNSTC-MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSP 651
             RA+++ S  STC  RSV+TIAF+F++E+H++E VA MARQYVR++++SVQRVA+A++P
Sbjct: 364 TTRASSDAS--STCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAP 421

Query: 652 SNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVM 711
           S I  Q  ++   G+PEA TLARWI  SYR + G +LL++ ++ +++ LK LW H+D++M
Sbjct: 422 SRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIM 481

Query: 712 CCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACL 771
           CCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKAL  E+P+IMQQGFA L
Sbjct: 482 CCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYL 541

Query: 772 QGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FMF+NWSFV
Sbjct: 542 PGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 584


>gi|414868943|tpg|DAA47500.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 673

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/673 (57%), Positives = 499/673 (74%), Gaps = 28/673 (4%)

Query: 170 LSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR-- 227
           +SKATGTAV WVQM GMKPGPDSVGI+A+SH CSGVAARACGLV LEPT+VAEILKDR  
Sbjct: 1   MSKATGTAVNWVQMVGMKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRAS 60

Query: 228 --------------PRGSA--------ILYALTTLAPARDFWLLRYTSVLEDGSLVVCER 265
                         P G+           YALTTLA  RDFW LRYTS L+DGSLV+CER
Sbjct: 61  WYRDCRRVDILHVIPTGNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLVICER 120

Query: 266 SLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 325
           SL +   GP+ P    F+RAE+LPSGYLIRPC+GGGS+I+IVDH+DL   SVPEVLRPLY
Sbjct: 121 SLTHSTGGPSGPKTPDFIRAEVLPSGYLIRPCDGGGSMIYIVDHVDLNACSVPEVLRPLY 180

Query: 326 ESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTD 385
           ES  +LAQK T AALR +RQ+A E +  +  G GR+PA LR  SQRLSRGFN+AV+GF D
Sbjct: 181 ESPKILAQKMTAAALRHIRQIAHESSGETPYGAGRQPAVLRTFSQRLSRGFNDAVSGFPD 240

Query: 386 EGW-TVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAI 444
           +GW +++ +DG +D+++ +NSSP+KL+G ++S +  F A+   ++CAKASMLLQNVPPA+
Sbjct: 241 DGWSSLLSSDGAEDISITINSSPNKLIGSDVSPSPFFSAMGGGIMCAKASMLLQNVPPAL 300

Query: 445 LLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFME 503
           L+RFLREHRSEWAD  +D YSAA+++  P ++PG R G F G+QVILPLA T+EHEE +E
Sbjct: 301 LVRFLREHRSEWADPGVDAYSAASLRANPYNVPGLRAGGFMGNQVILPLARTVEHEECLE 360

Query: 504 VIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGF 563
           VI+L+G G S ++ +M  DMFLLQLCSG+DE+A G CA+L+FAPID SFADDAPLLPSGF
Sbjct: 361 VIRLQGHGFSHDEVLMSPDMFLLQLCSGIDEDAPGACAQLVFAPIDESFADDAPLLPSGF 420

Query: 564 RIIPLDSGKETSSPNRTLDLASALEIGPAGNR-ATNNYSTNSTCMRSVMTIAFEFAFESH 622
           R+IPLD+  +  S  RTLDLASALE+G  G   A ++  + +   RSV+TIAF+F+FE+H
Sbjct: 421 RVIPLDAKTDVPSATRTLDLASALEVGSGGGLCALSDSGSGTRSTRSVLTIAFQFSFENH 480

Query: 623 MQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRC 682
           ++E VA MARQYVR++++ VQRVA+A+SPS +     L+ P G+PEAL LA WI  SYR 
Sbjct: 481 LRESVAAMARQYVRAVMAIVQRVAMAISPSRLGPHVELKHPPGSPEALALASWIGRSYRA 540

Query: 683 YLGVDLLKSSSE-GSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQD 741
           + G ++  S +E  + S L   W H+DA++CCSLK      FAN AG D+LETT+  +QD
Sbjct: 541 HTGTEIRWSDTEDAAGSPLTLFWKHSDAIICCSLKPAFTLKFANSAGFDILETTVANVQD 600

Query: 742 ITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETA 801
           + LE + DD G+KAL A+ P+IM QG A L GG+C SSMGR  SYE+AVAWKV+ ++   
Sbjct: 601 LQLEAVLDDGGQKALVAQLPKIMLQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGDDGAP 660

Query: 802 HCICFMFINWSFV 814
            C+  MF+NW+F+
Sbjct: 661 QCLALMFVNWTFI 673


>gi|414864316|tpg|DAA42873.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 602

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/587 (66%), Positives = 453/587 (77%), Gaps = 36/587 (6%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           K   +D+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPKQIKVWFQN
Sbjct: 19  KVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQN 78

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLAT 128
           RRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + RQ  Q+T+LA 
Sbjct: 79  RRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTSLAN 138

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            DTSCES VT+      P +  RDAS P+GLL+IAEET TEFLSKATGTA++WVQMPGMK
Sbjct: 139 -DTSCESNVTA------PPNAIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 191

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDSVGIVAISHGC GVAARACGLV LEPT+V EILKDRP                   
Sbjct: 192 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKVIEILKDRPSWFRDCRSLEVFTMFPAGN 251

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I      +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP     Q FV
Sbjct: 252 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQFV 311

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T  ALR L
Sbjct: 312 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 371

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV V  
Sbjct: 372 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVVAC 431

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NS+       N     G P     ++CAKASMLLQ+VPPA+L+RFLREHRSEWAD NID 
Sbjct: 432 NSTKKIRNNSNAGITFGAPG---GIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDA 488

Query: 464 YSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           Y A+++K   CSLPG R   F G Q+I+PLAHT+E+EE +EV++LEG   + ++A++ RD
Sbjct: 489 YLASSLKTSACSLPGLRPMRFSGGQMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRD 548

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD 569
           + LLQLC+G+DE +VG+  +L+FAPID  F DDAPL+ SGFR+IPLD
Sbjct: 549 IHLLQLCTGIDEKSVGSSFQLVFAPIDEHFPDDAPLISSGFRVIPLD 595


>gi|108705780|gb|ABF93575.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
          Length = 626

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/623 (63%), Positives = 469/623 (75%), Gaps = 43/623 (6%)

Query: 1   MAMSCKDG----KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSN 56
           M  S  DG    K   +D+GKYVRYTPEQVEALER+Y +CPKP+S RRQQL+RECPIL+N
Sbjct: 7   MRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILAN 66

Query: 57  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGY 116
           IEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN +
Sbjct: 67  IEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAH 126

Query: 117 FRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATG 175
            RQ  Q+T LA  DTSCES VT      TPQ+P RDAS P+GLLSIAEETLTEFLSKATG
Sbjct: 127 MRQQLQNTPLA-NDTSCESNVT------TPQNPLRDASNPSGLLSIAEETLTEFLSKATG 179

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------- 228
           TA++WVQMPGMKPGPDSVGIVAISHGC GVAARACGLV LEPT+V EILKDRP       
Sbjct: 180 TAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCR 239

Query: 229 -----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  +      LYA TTL PARDFW LRYT+ +EDGSLVVCERSL    
Sbjct: 240 NLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSG 299

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GP+    Q +VRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+
Sbjct: 300 GGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVV 359

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQK T AALR +RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW++M
Sbjct: 360 AQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIM 419

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           G DG++DV +  NS+       N   A G P     ++CAKASMLLQ+VPPA+L+RFLRE
Sbjct: 420 GGDGVEDVVIACNSTKKIRSNSNAGIAFGAPG---GIICAKASMLLQSVPPAVLVRFLRE 476

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGV 510
           HRSEWAD NID Y A+ +K   CSL G R   F GSQ+I+PLAHT+E+EE +EV++LEG 
Sbjct: 477 HRSEWADYNIDAYLASTLKTSACSLTGLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQ 536

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD- 569
             + ++A++ RD+ LLQLC+G+DE +VG+  +L+FAPID  F D+ PL+ SGFR+IPLD 
Sbjct: 537 PLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID-DFPDETPLISSGFRVIPLDM 595

Query: 570 -SGKETSSPNRTLDLASALEIGP 591
            + K    PN  +       +GP
Sbjct: 596 KTVKCCQIPNYIIHYPFDCSLGP 618


>gi|414871037|tpg|DAA49594.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 648

 Score =  756 bits (1953), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/588 (65%), Positives = 453/588 (77%), Gaps = 39/588 (6%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           K+G +D GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+RECPILSNIE KQIKVWFQN
Sbjct: 14  KSG-MDTGKYVRYTPEQVEALERVYAECPKPSSARRQQLLRECPILSNIEAKQIKVWFQN 72

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLAT 128
           RRCR+KQR E+SRLQ+VNRKLTAMNKLLMEEN+RLQKQVSQLV+EN Y +Q  Q+ +LAT
Sbjct: 73  RRCRDKQRNESSRLQSVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLAT 132

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            D SCES  T      TP +  RDAS P+GLL+IAEETLTEFLSKATGTA++WVQMPGMK
Sbjct: 133 -DASCESNAT------TPANL-RDASNPSGLLAIAEETLTEFLSKATGTAIDWVQMPGMK 184

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDS GIV ISHG  GVAARACGLV LEPT++ EILKDRP                   
Sbjct: 185 PGPDSFGIVTISHGGRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVYTMLPAGN 244

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I      +YA TTL PARDFW LRYT+ +EDGSLVVCERSL    +G +    Q FV
Sbjct: 245 GGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGDGQSAATTQQFV 304

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYL+R CEGGGSI+ IVDH+DL+ WSVPEVLRPLYESS V+AQK T  ALR L
Sbjct: 305 RAEMLPSGYLVRQCEGGGSIVRIVDHLDLDAWSVPEVLRPLYESSRVVAQKMTTTALRHL 364

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VM  DGM+DV +  
Sbjct: 365 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMCGDGMEDVIIAC 424

Query: 404 NSSPDKLMGLNLSFANGFPAVS-NAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNID 462
           NS   K +  + + A GF A     ++CAKASMLLQ+VPPA+L+RFLREHRSEWAD N D
Sbjct: 425 NS---KKIRSSSNPATGFGAPGPGGIICAKASMLLQSVPPAVLVRFLREHRSEWADYNFD 481

Query: 463 VYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPR 521
            YSA+A+K  PCSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG   + ++ ++ R
Sbjct: 482 AYSASALKTSPCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQTLTHDEGLLSR 541

Query: 522 DMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD 569
           D+ LLQLC+GMDE ++G+C +L+FAPID  F DDAPL+ SGFR+IPLD
Sbjct: 542 DIHLLQLCTGMDEKSMGSCFQLVFAPIDELFPDDAPLVSSGFRVIPLD 589


>gi|110349532|gb|ABG73241.1| class III HD-Zip protein HDZ32 [Ceratopteris richardii]
          Length = 803

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/814 (49%), Positives = 537/814 (65%), Gaps = 75/814 (9%)

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST 124
           WFQNRRCREKQRKE SRLQ VN KLTAMNKLLMEENDRLQKQV+QL+YENGYFRQ  Q  
Sbjct: 1   WFQNRRCREKQRKETSRLQTVNSKLTAMNKLLMEENDRLQKQVAQLMYENGYFRQQLQHG 60

Query: 125 TLATKDTSCESVVTSGQHHL-TPQH---PPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
            + T DTSC+SVVTSG  HL  PQ    P +D S AG++S+AEE L++FLSKATGT+V W
Sbjct: 61  GVTT-DTSCDSVVTSGLQHLPAPQQQQSPLQDGSYAGVISLAEEALSDFLSKATGTSVNW 119

Query: 181 VQMPGMKPGPDSVGIVAI-SHGCSGVAARACGLVGLEPTRVAEILKDRPR---------- 229
           +QMPGMKPGPD + +V I  HG +G+ ARACGL+ LEP+++ E+ KD+P           
Sbjct: 120 IQMPGMKPGPDFMSMVNIMPHGATGIGARACGLINLEPSKIVEVFKDKPTWLRECRRMTT 179

Query: 230 --------GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPT 275
                   G  I      +YA TTLAPA+DF  LRYT+V +DGS VVCERSL   Q  PT
Sbjct: 180 MFSTSTTGGGTIEVLYSQMYAPTTLAPAKDFCTLRYTTVSDDGSYVVCERSLNGAQTVPT 239

Query: 276 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 335
            P +  FVRA+M   G LIRPCE  GSI+ +VDHMDLE WS+PEVLRPLYESST+LA K 
Sbjct: 240 APQISAFVRADMFTGGCLIRPCETSGSIVVVVDHMDLESWSIPEVLRPLYESSTILAHKV 299

Query: 336 TMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDG 395
           T+AAL+ LR +AQE    S  G G++PAA+R+LS R+++ FN+AVNGF D+GW  +  DG
Sbjct: 300 TIAALKHLRHIAQENALDS-PGAGQQPAAVRSLSYRIAKAFNDAVNGFPDDGWVPLTGDG 358

Query: 396 MDDVTVL----VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           +DDVTV+    VN+ P   + L+ S      +++++VLCAKASMLLQ+VPPA+L++F+RE
Sbjct: 359 VDDVTVMMKGPVNAGPVDHLSLHQS-----SSINSSVLCAKASMLLQHVPPALLVQFMRE 413

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEG-- 509
           HRSEWAD   +     A+++      G    T  SQ++ P  H+IE +EF+E+IK+EG  
Sbjct: 414 HRSEWADPVCE----EAMRMSNPGFSGFHAATSNSQLLQPQVHSIEEDEFLELIKMEGQN 469

Query: 510 -VGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPL 568
            V    +  +  +DMFLLQLCSG+++ + G CA+++FAPIDAS +DD  L+PSGFR+IPL
Sbjct: 470 SVSIQDQSLMNSQDMFLLQLCSGLEDKSSGACAQMVFAPIDASVSDDIALIPSGFRVIPL 529

Query: 569 D----SGKETSSPNRTLDLASALEIGPAGNRATNNYSTN-----STCMRSVMTIAFEFA- 618
           D         +S  RTLDLAS LE+    +    +   +        +RSV+TIAF+F+ 
Sbjct: 530 DIEPHDQVNAASSGRTLDLASFLEVSNTTSSGGQDELHSRGRGAGGSLRSVLTIAFQFSC 589

Query: 619 FESHMQEHVATMARQYVRSIISSVQRVALALSPSNIS--------SQAGLRTPLGTPEAL 670
            E+ M + VA +ARQYVRS++S++QRVA+A   + +S             + P+      
Sbjct: 590 IEARMHDSVACIARQYVRSVVSTIQRVAVAFISNPLSLLKFPQPLRAYDSKNPITIQVQS 649

Query: 671 TLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLD 730
           +LAR IC SY+ Y+G DL++     SE+ L+ L    DA++CCS K +PVFTFAN+AG+D
Sbjct: 650 SLARCICQSYKLYMGADLVQVEDGSSEAYLQALNKMEDALLCCSCKPVPVFTFANRAGMD 709

Query: 731 MLETTL---VALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQG-GICLSSMGRPVSY 786
           MLE      +AL D+ LE+  D+ G + + +   Q+MQ+G+ACL G G+ +SS GR   +
Sbjct: 710 MLEMPSLPGLALHDMPLERTLDEDGNRDICSLLSQVMQKGYACLSGAGVRMSSRGRLARF 769

Query: 787 ERAVAWKVLNEEET------AHCICFMFINWSFV 814
           ERA+AWKV               + F++I WS V
Sbjct: 770 ERAIAWKVAETPSEEEEEIMVKGVAFLYIKWSLV 803


>gi|449506784|ref|XP_004162848.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ATHB-14-like [Cucumis sativus]
          Length = 566

 Score =  750 bits (1936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/561 (64%), Positives = 445/561 (79%), Gaps = 9/561 (1%)

Query: 260 LVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPE 319
           L VCERSL +   GP  PP   FVRAEMLPSGYLIR CEG GSIIHIVDH+DL+ WSVPE
Sbjct: 9   LQVCERSLSSSSGGPAGPPPSTFVRAEMLPSGYLIRACEGXGSIIHIVDHIDLDVWSVPE 68

Query: 320 VLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEA 379
           VLRPLYESS +LAQK T+AALR +RQ+AQE         GR+PA LR  SQ+L RGFN+A
Sbjct: 69  VLRPLYESSKILAQKITIAALRHIRQIAQETNGEIQCTGGRQPAVLRTFSQKLCRGFNDA 128

Query: 380 VNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMG--LNLSFANGFPAVSNAVLCAKASMLL 437
           VNGF D+GW+ MG+DG++DVT+L+N+S +K  G   N S    +P+    V+CAKASMLL
Sbjct: 129 VNGFADDGWSPMGSDGVEDVTILINTSANKFSGSQYNTSL---YPSFGGGVMCAKASMLL 185

Query: 438 QNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTI 496
           QNVPPA+L+RFLREHRSEWAD  +D YSAA++K  P ++P +R G F  SQVILPLA T+
Sbjct: 186 QNVPPALLVRFLREHRSEWADYGVDAYSAASLKASPYAVPCARPGGFPSSQVILPLATTV 245

Query: 497 EHEEFMEVIKLEGVGHSPED-AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADD 555
           EHEEF+EV++LEG+  SPED A+  RDM+LLQLCSG+DENAVG CA+L+FAPID SFADD
Sbjct: 246 EHEEFLEVVRLEGLAFSPEDVALAGRDMYLLQLCSGVDENAVGACAQLVFAPIDESFADD 305

Query: 556 APLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAF 615
           APLLPSGFR+IPLD   +  +  RTLDLAS LE+G    R+      ++  +RSV+TIAF
Sbjct: 306 APLLPSGFRVIPLDPKTDEPTAARTLDLASTLEVGANAARSAGETDLSNYNLRSVLTIAF 365

Query: 616 EFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARW 675
           +F FE+H+QE+VA MARQYVRS++ SVQRVA+A+SPS +SS  GL+   G+PEALTLARW
Sbjct: 366 QFTFENHLQENVAAMARQYVRSVVGSVQRVAMAISPSRLSSNMGLKPLPGSPEALTLARW 425

Query: 676 ICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLE 733
           IC SYR ++G +LL++ S+  +++LK LWHH+DA+MCCS+K  A  VFTFANQAGLDMLE
Sbjct: 426 ICRSYRVHVGAELLQADSQSGDAMLKQLWHHSDAIMCCSVKTNASAVFTFANQAGLDMLE 485

Query: 734 TTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWK 793
           TTLV LQDI L+KI D+ GRK L +EFP+IMQQGFA L  GIC+SSMGRP+SYE+AVAWK
Sbjct: 486 TTLVGLQDIMLDKILDEAGRKILCSEFPKIMQQGFANLPSGICVSSMGRPISYEQAVAWK 545

Query: 794 VLNEEETAHCICFMFINWSFV 814
           VLN++++ HC+ FMFINWSFV
Sbjct: 546 VLNDDDSNHCLAFMFINWSFV 566


>gi|312282779|dbj|BAJ34255.1| unnamed protein product [Thellungiella halophila]
          Length = 592

 Score =  723 bits (1866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/594 (61%), Positives = 449/594 (75%), Gaps = 22/594 (3%)

Query: 235 YALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLI 294
           YA TTLAPARDFW LRYT+ L++GS VVCERSL     GP       FVRAEML SGYLI
Sbjct: 7   YAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEMLSSGYLI 66

Query: 295 RPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSS 354
           RPC+GGGSIIHIVDH++LE WSVP+VLRPLYESS V+AQK T++ALR +RQ+AQE     
Sbjct: 67  RPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALRYIRQLAQESNGEL 126

Query: 355 VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD-KLMGL 413
           V G GR+PA LR  SQRLSRGFN+AVNGF D+GW+ M  DG +D+ V +NS+     +  
Sbjct: 127 VYGIGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIVAINSTKHLNNISN 186

Query: 414 NLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGP 473
           +LSF  G       VLCAKASMLLQNVPPA+L+RFLREHRSEWAD N+D YSAA +K G 
Sbjct: 187 SLSFLGG-------VLCAKASMLLQNVPPAVLIRFLREHRSEWADFNVDAYSAATLKAGT 239

Query: 474 CSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGM 532
            + PG R   F GSQ+I+PL HTIEHEE +EV++LEG   + EDA M RD+ LLQ+C+G+
Sbjct: 240 FAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGI 299

Query: 533 DENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETS-----SPNRTLDLASAL 587
           DENAVG C+ELIFAPI+  F DDAPL+PSGFR+IP+D+    S     + +RTLDL S+L
Sbjct: 300 DENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDSQDLLTANHRTLDLTSSL 359

Query: 588 EIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVAL 647
           E+GP+   A+ N S NS+  R ++TIAF+F FE+++QE+VA MA QYVRS+ISSVQRVA+
Sbjct: 360 EVGPSPENASGNSSANSS-SRCILTIAFQFPFENNLQENVAGMACQYVRSVISSVQRVAM 418

Query: 648 ALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS-ESILKNLWHH 706
           A+SPS IS   G +   G+PEA+TLA+WI  SY  +LG +LL   S GS +S+LK LW H
Sbjct: 419 AISPSGISPSLGSKLSPGSPEAVTLAQWISQSYTHHLGSELLTIDSLGSNDSVLKLLWDH 478

Query: 707 TDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQ 766
            DA++CCSLK  PVF FANQAGLDMLETTLVALQDITLEKIFD+ GRKAL ++F ++MQQ
Sbjct: 479 QDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKALCSDFAKLMQQ 538

Query: 767 GFACLQGGICLSSMGRPVSYERAVAWKVL------NEEETAHCICFMFINWSFV 814
           GFACL  GICLS+MGR V+YE+AVAWKV       N+    HC+ F F+NWSFV
Sbjct: 539 GFACLPSGICLSTMGRHVTYEQAVAWKVFAASEDNNDSSNLHCLAFSFVNWSFV 592


>gi|238908808|gb|ACF86690.2| unknown [Zea mays]
          Length = 558

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/561 (59%), Positives = 428/561 (76%), Gaps = 4/561 (0%)

Query: 255 LEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEP 314
           +EDGSLVVCERSL     GP     Q FVRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE 
Sbjct: 1   MEDGSLVVCERSLTGSGGGPNAASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEA 60

Query: 315 WSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSR 374
           WSVPEVLRPLYESS V+AQK T  ALR LRQ+AQE +   V   GR+PA LR  SQRLSR
Sbjct: 61  WSVPEVLRPLYESSRVVAQKMTTVALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSR 120

Query: 375 GFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKAS 434
           GFN+A++GF D+GW+VMG DG++DV V  NS+       N     G P     ++CAKAS
Sbjct: 121 GFNDAISGFNDDGWSVMGGDGIEDVVVACNSTKKIRNNSNAGITFGAPG---GIICAKAS 177

Query: 435 MLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLA 493
           MLLQ+VPPA+L+RFLREHRSEWAD NID Y A+++K   CSLPG R   F G Q+I+PLA
Sbjct: 178 MLLQSVPPAVLVRFLREHRSEWADYNIDAYLASSLKTSACSLPGLRPMRFSGGQMIMPLA 237

Query: 494 HTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFA 553
           HT+E+EE +EV++LEG   + ++A++ RD+ LLQLC+G+DE +VG+  +L+FAPID  F 
Sbjct: 238 HTVENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDEHFP 297

Query: 554 DDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTI 613
           DDAPL+ SGFR+IPLD   +  S  RTLDLAS+L++G A  +A+ +   +   +RSV+TI
Sbjct: 298 DDAPLISSGFRVIPLDMKTDGVSSGRTLDLASSLDVGSAAPQASGDAPPDDCNLRSVLTI 357

Query: 614 AFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLA 673
           AF+F +E H+Q+ VATMARQYVRS++S+VQRV++A+SPS     AG R   G PEA TLA
Sbjct: 358 AFQFPYEMHLQDSVATMARQYVRSVVSAVQRVSMAISPSQSGLNAGQRMLSGFPEAATLA 417

Query: 674 RWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLE 733
           RW+C SY  +LGV+LL  S E  E++LK LWHH DAV+CCS K  P+FTFAN+AGLDMLE
Sbjct: 418 RWVCQSYHYHLGVELLNQSDEAGEALLKMLWHHPDAVLCCSFKEKPMFTFANKAGLDMLE 477

Query: 734 TTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWK 793
           T+L+ALQD+TL+KIFD+ GRKA+F++  ++M+QG+A L  G+C+S MGR VS+++AVAWK
Sbjct: 478 TSLIALQDLTLDKIFDESGRKAIFSDISKLMEQGYAYLPSGVCMSGMGRHVSFDQAVAWK 537

Query: 794 VLNEEETAHCICFMFINWSFV 814
           VL E+ + HC+ F F+NWSFV
Sbjct: 538 VLGEDSSVHCLAFCFVNWSFV 558


>gi|414871783|tpg|DAA50340.1| TPA: hypothetical protein ZEAMMB73_581465 [Zea mays]
          Length = 513

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/515 (63%), Positives = 421/515 (81%), Gaps = 5/515 (0%)

Query: 303 IIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRP 362
           +IHIVDH+DL+ WSVPEVLRPLYES  +LAQKTT+AALR +RQ+A E +     G GR+P
Sbjct: 1   MIHIVDHVDLDAWSVPEVLRPLYESPKILAQKTTIAALRHIRQIAHESSGEMPYGGGRQP 60

Query: 363 AALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFP 422
           A LR  SQRLSRGFN+AVNGF D+GW++M +DG +DVT+ +NSSP+KL+G +++ +  F 
Sbjct: 61  AVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAEDVTIAINSSPNKLIGPHVNSSQLFT 120

Query: 423 AVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVG 482
           A+   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD  +D YSAAA++  P ++PG R  
Sbjct: 121 AIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAAALRASPYAVPGLRAS 180

Query: 483 TF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCA 541
            F GSQVILPLAHT+EHEEF+EVI+LEG     ++ ++ RDM+LLQLCSG+DENA G CA
Sbjct: 181 GFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQLCSGVDENAAGACA 240

Query: 542 ELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGN-RATNNY 600
           +L+FAPID SFADDAPLLPSGFR+IPLD+  +  S  RTLDLAS LE+G  G  RA+++ 
Sbjct: 241 QLVFAPIDESFADDAPLLPSGFRVIPLDAKTDPPSGTRTLDLASTLEVGSGGTTRASSDA 300

Query: 601 STNSTC-MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAG 659
           S  STC  RSV+TIAF+F++E+H++E VA MARQYVR++++SVQRVA+A++PS I  Q  
Sbjct: 301 S--STCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLE 358

Query: 660 LRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALP 719
           ++   G+PEA TLARWI  SYR + G +LL++ ++ +++ LK LW H+D++MCCSLKA P
Sbjct: 359 MKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAP 418

Query: 720 VFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSS 779
           VFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKAL  E+P+IMQQGFA L GG+C+SS
Sbjct: 419 VFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSS 478

Query: 780 MGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           MGRPVSYE+AVAWKVL++++T HC+ FMF+NWSFV
Sbjct: 479 MGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 513


>gi|109729930|tpg|DAA05779.1| TPA_inf: class III HD-Zip protein HDZ33 [Selaginella
           moellendorffii]
          Length = 812

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/840 (45%), Positives = 528/840 (62%), Gaps = 80/840 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           KY RYT EQ+E LE +Y+ECPKPSS+RRQQL++E PIL+NI PKQ+KVWFQNRRCREKQR
Sbjct: 6   KYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQR 65

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATK-----DT 131
           KE SRL  +N KLTA+NK+L+E ND L KQ +QL  +    R+H      + +       
Sbjct: 66  KETSRLHGLNSKLTALNKILVENNDHLAKQSTQLTLQKHTLRKHLYGDCSSQRPPMEASQ 125

Query: 132 SCESVVTSGQHHLTP-------QHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
            C   + +G   +         QH   D  P GL ++AE++L +FL+KATGTAV+W+Q+ 
Sbjct: 126 VCRGALAAGSSEIAGTSELPNIQHLSLDHGPVGLSALAEQSLADFLAKATGTAVDWIQLL 185

Query: 185 GMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVA-----EILKDR------------ 227
           GMKPGPDS GIVAISHGC G+AARA GLV LE TRV+     E+LKD+            
Sbjct: 186 GMKPGPDSFGIVAISHGCDGIAARALGLVALEATRVSEWRIVEVLKDKTSWLWDCRRSDV 245

Query: 228 ------PRGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPT 275
                   GS +      LYA TTLAP RDF  LR T+ LEDG+LVVCERS+ + +    
Sbjct: 246 IHICSSENGSTMEIMHTQLYAPTTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAECLSY 305

Query: 276 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQK 334
           +P  Q+FVRAEML SGYL+RPCEGG  I+HI+DH+DL+P SV EVL RPLY SS++LAQ+
Sbjct: 306 VPSTQYFVRAEMLTSGYLVRPCEGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSSSLLAQR 365

Query: 335 TTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
            T+ ALR L+ +AQE     V G G++P+ LR+LS+R++RGFN+AVNGF D+GW  MG D
Sbjct: 366 MTVKALRFLKHLAQEEIGEIVVGGGQQPSVLRSLSRRMARGFNDAVNGFPDDGWCTMGGD 425

Query: 395 GMDDVTVLVNSSPDKLMGLNLS-FANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHR 453
           G+D+V V  N++    +  +LS F +   +    VLCAKASMLLQNV P+ L+RFLR+HR
Sbjct: 426 GLDNVAVSCNAT----INFSLSKFQSDRLSSLAGVLCAKASMLLQNVHPSYLIRFLRDHR 481

Query: 454 SEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHS 513
           SEW   N+D +   A         G R      Q  +PL HT + E+F+E + LEG   +
Sbjct: 482 SEWG-CNMDFFQQDAASRS----HGKR------QAHVPLFHTAK-EDFLEAVILEGHYSA 529

Query: 514 PEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE 573
            +  I+ R+++LLQLCSG+++  +  C++LIFAP+DA+ +DD PLL SGFR++PL     
Sbjct: 530 EDGTILSREIYLLQLCSGIEDEDIDGCSQLIFAPVDANLSDDMPLLSSGFRVLPL----- 584

Query: 574 TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQ 633
               +  +   S  E   +G R  + ++      RS++TIAF+F +E   ++ VA MAR 
Sbjct: 585 CDDMDDIVKRQSDSEELRSGKRKNHKFA------RSILTIAFQFMYEVGTRDTVAEMARN 638

Query: 634 YVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           Y+R+++  VQR+ L+L+ S++ S +    P  + +  +L   I  SY    GVD++  + 
Sbjct: 639 YIRNVMDFVQRITLSLAASSLGSSS-ADAPFVSSKGASLIHQILQSYSVSHGVDIIPRNF 697

Query: 694 EGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGR 753
              ++I+   WH+  A++CCSLKA P F  ANQAGL MLET +  LQ ++ E+       
Sbjct: 698 TDKDAIVMLFWHYAAAIICCSLKATPEFVIANQAGLQMLETKIEELQTVSWERTIG---- 753

Query: 754 KALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
             L +E  +++++    L  GI  +S G+ V YER + W+V +E+  A     MF+NWSF
Sbjct: 754 YGLDSELAKLLREENGELPEGIAQTSKGKRVCYERGLVWRV-DEQHLA----LMFVNWSF 808


>gi|302763605|ref|XP_002965224.1| hypothetical protein SELMODRAFT_167294 [Selaginella moellendorffii]
 gi|300167457|gb|EFJ34062.1| hypothetical protein SELMODRAFT_167294 [Selaginella moellendorffii]
          Length = 778

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/825 (46%), Positives = 523/825 (63%), Gaps = 84/825 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           KY RYT EQ+E LE +Y+ECPKPSS+RRQQL++E PIL+NI PKQ+KVWFQNRRCREKQR
Sbjct: 6   KYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQR 65

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
           KE SRL  +N KLTA+NK+L+E ND L KQ +QL  +    R+H            C S 
Sbjct: 66  KETSRLHGLNSKLTALNKILVENNDHLAKQSTQLTLQKHTLRKHLYG--------DCSS- 116

Query: 137 VTSGQHHLTPQHPPRDASPA--GLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVG 194
                     Q PP +AS     L ++AE++L +FL+KATGTAV+W+Q+ GMKPGPDS G
Sbjct: 117 ----------QRPPMEASQVCCKLSALAEQSLADFLAKATGTAVDWIQLLGMKPGPDSFG 166

Query: 195 IVAISHGCSGVAARACGLVGLEPTRVAEILKDR------------------PRGSAI--- 233
           IVAISHGC G+AARA GLV LE TR+ E+LKD+                    GS +   
Sbjct: 167 IVAISHGCDGIAARALGLVALEATRIVEVLKDKTSWLWDCRRSDVIHICSSENGSTMEIM 226

Query: 234 ---LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
              LYA TTLAP RDF  LR T+ LEDG+LVVCERS+ + +    +P  Q+FVRAEML S
Sbjct: 227 HTQLYAPTTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAECLSYVPSTQYFVRAEMLTS 286

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQKTTMAALRQLRQMAQE 349
           GYL+RPCEGG  I+HI+DH+DL+P SV EVL RPLY SS++LAQ+ T+ ALR L+ +AQE
Sbjct: 287 GYLVRPCEGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSSSLLAQRMTVKALRFLKHLAQE 346

Query: 350 VTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDK 409
                V G G++P+ LR+LS+R++RGFN+AVNGF D+GW  MG DG+D+V V  N++   
Sbjct: 347 EIGEIVVGGGQQPSVLRSLSRRMARGFNDAVNGFPDDGWCTMGGDGLDNVAVSCNAT--- 403

Query: 410 LMGLNLS-FANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAA 468
            +  +LS F +   +    VLCAKASMLLQNV P+ L+RFLR+HRSEW   N+D +   A
Sbjct: 404 -INFSLSKFQSDRLSSLAGVLCAKASMLLQNVHPSYLIRFLRDHRSEWG-CNMDFFQQDA 461

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
                    G R      Q  +PL HT + E+F+E + LEG   + +  I+ R+++LLQL
Sbjct: 462 ASRS----HGKR------QAHVPLFHTAK-EDFLEAVILEGHYSAEDGTILSREIYLLQL 510

Query: 529 CSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALE 588
           CSG+++  +  C++LIFAP+DA+ +DD PLL SGFR++PL         +  +   S  E
Sbjct: 511 CSGIEDEDIDGCSQLIFAPVDANLSDDMPLLSSGFRVLPL-----CDDMDDIVKRQSDSE 565

Query: 589 IGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALA 648
              +G R  + ++      RS++TIAF+F +E   ++ VA MAR Y+R+++  VQR+ L+
Sbjct: 566 ELRSGKRKNHKFA------RSILTIAFQFMYEVGTRDTVAEMARNYIRNVMDFVQRITLS 619

Query: 649 LSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTD 708
           L+ S++ S +    P  + +  +L   I  SY    GVD++  +    ++I+   WH+  
Sbjct: 620 LAASSLGSSS-ADAPFVSSKGASLIHQILQSYSVSHGVDIIPRNFTDKDAIVMLFWHYAA 678

Query: 709 AVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGF 768
           A++CCSLKA P F  ANQAGL MLET +  LQ ++ E+         L +E  +++++  
Sbjct: 679 AIICCSLKATPEFVIANQAGLQMLETKIEELQTVSWERTIG----YGLDSELAKLLREEN 734

Query: 769 ACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
             L  GI  +S G+ V YER + W+V +E+  A     MF+NWSF
Sbjct: 735 GELPEGIAQTSKGKRVCYERGLVWRV-DEQHLA----LMFVNWSF 774


>gi|302757763|ref|XP_002962305.1| hypothetical protein SELMODRAFT_77000 [Selaginella moellendorffii]
 gi|300170964|gb|EFJ37565.1| hypothetical protein SELMODRAFT_77000 [Selaginella moellendorffii]
          Length = 821

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/849 (44%), Positives = 528/849 (62%), Gaps = 89/849 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           KY RYT EQ+E LE +Y+ECPKPSS+RRQQL++E PIL+NI PKQ+KVWFQNRRCREKQR
Sbjct: 6   KYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQR 65

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATK-----DT 131
           KE SRL  +N KLTA+NK+L+E ND L KQ +QL  +    R+H      + +       
Sbjct: 66  KETSRLHGLNSKLTALNKILVENNDHLAKQSTQLTLQKHTLRKHLYGDCSSQRPPMEASQ 125

Query: 132 SCESVVTSGQHHLTP-------QHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
            C   + +G   +         QH   D  P GL ++AE++L +FL+KATGTAV+W+Q+ 
Sbjct: 126 VCRGALAAGSSEIAGTSELPNIQHLSLDHGPVGLSALAEQSLADFLAKATGTAVDWIQLL 185

Query: 185 GMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVA-----EILKDR------------ 227
           GMKPGPDS GIVAISHGC G+AARA GLV LE TRV+     E+LKD+            
Sbjct: 186 GMKPGPDSFGIVAISHGCDGIAARALGLVALEATRVSEWRIVEVLKDKTSWLWDCRRSDV 245

Query: 228 ------PRGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPT 275
                   GS +      LYA TTLAP RDF  LR T+ LEDG+LVVCERS+ + +    
Sbjct: 246 IHICSSENGSTMEIMHTQLYAPTTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAECLSY 305

Query: 276 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQK 334
           +P  Q+FVRAEML SGYL+RPCEGG  I+HI+DH+DL+P SV EVL RPLY SS++LAQ+
Sbjct: 306 VPSTQYFVRAEMLTSGYLVRPCEGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSSSLLAQR 365

Query: 335 TTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
            T+ ALR L+ +AQE     V G G++P+ LR+LS+R++RGFN+AVNGF D+GW  MG D
Sbjct: 366 MTVKALRFLKHLAQEEIGEIVVGGGQQPSVLRSLSRRMARGFNDAVNGFPDDGWCTMGGD 425

Query: 395 GMDDVTVLVNSSPDKLMGLNLS-FANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHR 453
           G+D+V V  N++    +  +LS F +   +    VLCAKASMLLQNV P+ L+RFLR+HR
Sbjct: 426 GLDNVAVSCNAT----INFSLSKFQSDRLSSLAGVLCAKASMLLQNVHPSYLIRFLRDHR 481

Query: 454 SEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHS 513
           SEW   N+D +   A         G R      Q  +PL HT + E+F+E + LEG   +
Sbjct: 482 SEWG-CNMDFFQQDAASRS----HGKR------QAHVPLFHTAK-EDFLEAVILEGHYSA 529

Query: 514 PEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKE 573
            +  I+ R+++LLQLCSG+++  +  C++LIFAP+DA+ +DD PLL SGFR++PL     
Sbjct: 530 EDGTILSREIYLLQLCSGIEDEDIDGCSQLIFAPVDANLSDDMPLLSSGFRVLPL----- 584

Query: 574 TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQ 633
               +  +   S  E   +G R  + ++      RS++TIAF+F +E   ++ VA MAR 
Sbjct: 585 CDDMDDIVKRQSDSEELRSGKRKNHKFA------RSILTIAFQFMYEVGTRDTVAEMARN 638

Query: 634 YVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           Y+R+++  VQR+ L+L+ S++ S +    P  + +  +L   I  SY    GVD++  + 
Sbjct: 639 YIRNVMDFVQRITLSLAASSLGSSS-ADAPFVSSKGASLIHQILQSYSVSHGVDIIPRNF 697

Query: 694 EGSESILKNLWHHTDAVMCCSLK---------ALPVFTFANQAGLDMLETTLVALQDITL 744
              ++I+   WH+  A++CCSLK         A P F  ANQAGL MLET +  LQ ++ 
Sbjct: 698 TDKDAIVMLFWHYAAAIICCSLKASCPFYQSQATPEFVIANQAGLQMLETKIEELQTVSW 757

Query: 745 EKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCI 804
           E+         L +E  +++++    L  GI  +S G+ V YER + W+V +E+  A   
Sbjct: 758 ERTIG----YGLDSELAKLLREENGELPEGIAQTSKGKRVCYERGLVWRV-DEQHLA--- 809

Query: 805 CFMFINWSF 813
             MF+NWSF
Sbjct: 810 -LMFVNWSF 817


>gi|110349556|gb|ABG73253.1| class III HD-Zip protein HDZ32 [Cycas revoluta]
          Length = 392

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/392 (78%), Positives = 336/392 (85%), Gaps = 24/392 (6%)

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST 124
           WFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ  Q+ 
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQLQNA 60

Query: 125 TLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
           ++AT DTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW+QMP
Sbjct: 61  SIATTDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWIQMP 120

Query: 185 GMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP---------------- 228
           GMKPGPDS+GIVAISHGC+GVAARACGLVGLEPT+VAEILKDRP                
Sbjct: 121 GMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTKVAEILKDRPSWFRDCRCVDILTAFS 180

Query: 229 --RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQ 280
              G  +      +YA TTLA ARDFW LRYTSVLEDGSLVVCERSL   Q GP+MPPV 
Sbjct: 181 TGNGGTVELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLVVCERSLSGTQGGPSMPPVP 240

Query: 281 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL 340
           HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL
Sbjct: 241 HFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL 300

Query: 341 RQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVT 400
           R LRQ+AQE++   V GWGR+PAALR   QRLS+GFNEAVNGFTD+GW++MG+DGMDDVT
Sbjct: 301 RHLRQIAQEISCDVVLGWGRQPAALRTFGQRLSKGFNEAVNGFTDDGWSLMGSDGMDDVT 360

Query: 401 VLVNSSPDKLMGLNLSFANGFPAVSNAVLCAK 432
           VL++SSP KL+G  L+ ++G PA+   +LCAK
Sbjct: 361 VLISSSPSKLLGSQLASSDGLPALGGGILCAK 392


>gi|110349550|gb|ABG73250.1| class III HD-Zip protein HDZ31 [Ginkgo biloba]
          Length = 394

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 301/394 (76%), Positives = 327/394 (82%), Gaps = 26/394 (6%)

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST 124
           WFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVYENGY RQ  Q+ 
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQNA 60

Query: 125 TLATKDTSCESVVTSGQHHL--TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           ++AT DTSCESVVTSGQH    TPQHPPRDASPAGLLSIAEETL EFLSKATGTAV+WVQ
Sbjct: 61  SVATTDTSCESVVTSGQHQHNPTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVDWVQ 120

Query: 183 MPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------------- 228
           MPGMKPGPDS+GIVAISH CSGVAARACGLVGLEPT++AEILKDRP              
Sbjct: 121 MPGMKPGPDSIGIVAISHSCSGVAARACGLVGLEPTKIAEILKDRPSWLRDCRCLDVLTP 180

Query: 229 ----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPP 278
                G  I       YA TTLA ARDFW LRYT+VLEDGSLVVCERSL   Q GP++ P
Sbjct: 181 FPTGNGGTIELLYMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLSGAQGGPSIAP 240

Query: 279 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA 338
            QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK T+A
Sbjct: 241 AQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIA 300

Query: 339 ALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD 398
           ALR++RQ+AQEVT   V GWGR+PA LR  SQRLSRGFNEAVNGFTD+GW++MGNDGM+D
Sbjct: 301 ALRRIRQIAQEVTGEVVFGWGRQPAVLRTFSQRLSRGFNEAVNGFTDDGWSLMGNDGMED 360

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAK 432
           VT+ +NSSP KL+G  ++ +NG  AV   +LCAK
Sbjct: 361 VTIAINSSPSKLLGSQVNSSNGLTAVGGGILCAK 394


>gi|413957204|gb|AFW89853.1| rolled leaf1 [Zea mays]
          Length = 528

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 309/455 (67%), Positives = 347/455 (76%), Gaps = 35/455 (7%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           K   +D+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPKQIKVWFQN
Sbjct: 22  KVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQN 81

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLAT 128
           RRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN + RQ  Q+T+LA 
Sbjct: 82  RRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTSLAN 141

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            DTSCES VT      TP +P RDAS P+GLL+IAEET TEFLSKATGTA++WVQMPGMK
Sbjct: 142 -DTSCESNVT------TPPNPIRDASNPSGLLAIAEETFTEFLSKATGTAIDWVQMPGMK 194

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDSVGIVAISHGC GVAARACGLV LEPT+  EILKDRP                   
Sbjct: 195 PGPDSVGIVAISHGCRGVAARACGLVNLEPTKGIEILKDRPSWFRDCRSLEVFTRFPAGN 254

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I      +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP     Q FV
Sbjct: 255 GGTIELIYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASTQQFV 314

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T  ALR L
Sbjct: 315 RAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTVALRHL 374

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV +  
Sbjct: 375 RQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVVIAC 434

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQ 438
           NS+       N     G P     ++CAKASMLLQ
Sbjct: 435 NSTKKIRNTSNAGITFGAPG---GIICAKASMLLQ 466


>gi|224035091|gb|ACN36621.1| unknown [Zea mays]
          Length = 425

 Score =  573 bits (1477), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 270/427 (63%), Positives = 349/427 (81%), Gaps = 5/427 (1%)

Query: 391 MGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR 450
           M +DG +DVT+ +NSSP+KL+G +++ +  F A+   +LCAKASMLLQNVPPA+L+RFLR
Sbjct: 1   MSSDGAEDVTIAINSSPNKLIGPHVNSSQLFTAIGGGILCAKASMLLQNVPPALLVRFLR 60

Query: 451 EHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEG 509
           EHRSEWAD  +D YSAAA++  P ++PG R   F GSQVILPLAHT+EHEEF+EVI+LEG
Sbjct: 61  EHRSEWADPGVDAYSAAALRASPYAVPGLRASGFMGSQVILPLAHTLEHEEFLEVIRLEG 120

Query: 510 VGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD 569
                ++ ++ RDM+LLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD
Sbjct: 121 HSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLD 180

Query: 570 SGKETSSPNRTLDLASALEIGPAGN-RATNNYSTNSTC-MRSVMTIAFEFAFESHMQEHV 627
           +  +  S  RTLDLAS LE+G  G  RA+++ S  STC  RSV+TIAF+F++E+H++E V
Sbjct: 181 AKTDPPSGTRTLDLASTLEVGSGGTTRASSDAS--STCNTRSVLTIAFQFSYENHLRESV 238

Query: 628 ATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVD 687
           A MARQYVR++++SVQRVA+A++PS I  Q  ++   G+PEA TLARWI  SYR + G +
Sbjct: 239 AAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAE 298

Query: 688 LLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKI 747
           LL++ ++ +++ LK LW H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI
Sbjct: 299 LLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKI 358

Query: 748 FDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFM 807
            DD GRKAL  E+P+IMQQGFA L GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FM
Sbjct: 359 LDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFM 418

Query: 808 FINWSFV 814
           F+NWSFV
Sbjct: 419 FVNWSFV 425


>gi|110349546|gb|ABG73248.1| class III HD-Zip protein HDZ34 [Pinus taeda]
          Length = 558

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 288/564 (51%), Positives = 393/564 (69%), Gaps = 13/564 (2%)

Query: 257 DGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWS 316
           D +LVVCERSL    N   +PP + FVRAEML SGYLIRPC G GSI++IVDHMDLE   
Sbjct: 1   DRNLVVCERSL----NLGMVPPNEGFVRAEMLSSGYLIRPCGGVGSIVYIVDHMDLEAGR 56

Query: 317 VPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGF 376
            PEVLRP+YESS +LAQK T+AALR LR +AQE     V G   +PAALRALS R++R F
Sbjct: 57  APEVLRPMYESSAILAQKMTIAALRHLRSLAQEAAGEIVTGGTLQPAALRALSLRIARSF 116

Query: 377 NEAVNGFTDEGWTVMGNDGMDDVTVLVNSS-PDKLMGLNLSFANGFPAVSNA-VLCAKAS 434
           N+A+N F ++GW  + +DGMDD+++ +NSS   + +GL  S +N   +  +  VLCAKAS
Sbjct: 117 NDAINSFPEDGWFSVASDGMDDISISLNSSWSPRTVGLKCSSSNNLWSDGDGGVLCAKAS 176

Query: 435 MLLQNVPPAILLRFLREHRSEWAD---NNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVIL 490
           MLLQNVPPA+L+RFLREHRSEWAD     +D+ S+A ++ G            G  +V +
Sbjct: 177 MLLQNVPPAVLIRFLREHRSEWADWADCELDMSSSATLRTGVYGAAALAGAELGRREVPM 236

Query: 491 PLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDA 550
           PLAH+ EH+E ME++K EG   + + A++ ++M+LLQLC+G+DE A+G CA+L+FAP+D 
Sbjct: 237 PLAHS-EHQEIMELVKFEGYDSARDGALVSKEMYLLQLCNGIDETAIGDCAQLVFAPVDG 295

Query: 551 SFADDAPLLPSGFRIIPLDSG-KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRS 609
           + +DD PLLPSGFR+IPLD+G  +    + TLDLAS LE G   + A      +S  +RS
Sbjct: 296 ALSDDIPLLPSGFRVIPLDTGFMDGYGLSCTLDLASMLEGGSDMDAAKTETGISSKNLRS 355

Query: 610 VMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEA 669
           ++TIAF+F +E+H  + V+  AR+Y+R++++SVQRVA+A++P  + S  GLR   GT E 
Sbjct: 356 IVTIAFQFGYETHNCDSVSVAARKYMRTVVASVQRVAMAIAP-RVGSTLGLRNLSGTTEV 414

Query: 670 LTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGL 729
           L L + I  SYR   G+DLL+      E + K +WHH+DA++CC+ K+LP F FAN+A L
Sbjct: 415 LALVQRIVGSYRINFGMDLLRKQPSNDEELFKMVWHHSDALICCTCKSLPEFIFANEAAL 474

Query: 730 DMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERA 789
           DMLETT   L D+  ++  D+  +K  +++F ++MQQGFA L  GI LSSMGRPV+YERA
Sbjct: 475 DMLETTSGGLHDLRWDQTLDETEKKNAYSDFTKVMQQGFAYLPAGIRLSSMGRPVAYERA 534

Query: 790 VAWKVLNEEETAHCICFMFINWSF 813
           +AW V N+ E   C+ FMF+NWSF
Sbjct: 535 MAWSVANDNERMPCVAFMFVNWSF 558


>gi|89514839|gb|ABD75294.1| class III homeodomain-leucine zipper protein C3HDZ1 [Chara
           corallina]
          Length = 910

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 321/765 (41%), Positives = 455/765 (59%), Gaps = 76/765 (9%)

Query: 106 QVSQLVYENGYFRQHTQSTT---------LATKDTSCESVVTSGQHHLTPQHPPRDASPA 156
           Q+ + V+E+G     + S T             D S E VV   Q  ++     R  S +
Sbjct: 161 QIQRGVHEDGSTLSRSLSATSLSLRADASTTVTDASSEVVVNGVQPSVSVSS--RADSQS 218

Query: 157 GLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLE 216
            L+ +A + + EFL KATGTAV+W  MPG K GPD+  +V I  G  G+A+R  GLV +E
Sbjct: 219 ALMQMASDMVGEFLGKATGTAVDWANMPGTKNGPDTFEMVFILRGGPGIASRVYGLVLME 278

Query: 217 PTRVAEILKDRP------RGSAIL-----------------YALTTLAPARDFWLLRYTS 253
           P +VA  LKDR       R S +L                 +A TTLAP RDF   RYT+
Sbjct: 279 PAKVASALKDRSQWLRECRKSEVLGEFRTDQGTVEIVYTQMFAPTTLAPPRDFCTFRYTT 338

Query: 254 VLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLE 313
            ++DGS+V+CERS+     G  + PV  FVRAEM PSGY I+PC  G SII+IVDH+DL+
Sbjct: 339 FMQDGSIVICERSMSG---GTNLEPVPAFVRAEMHPSGYYIKPC-NGNSIIYIVDHVDLK 394

Query: 314 PWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLS 373
           P SVPEVLRPLYESS  LAQ+ TM ALR LR++A +    S    G +  A R +++R++
Sbjct: 395 PLSVPEVLRPLYESSAALAQRQTMEALRYLRRLASDSNLDSPRANGHQALAWRGIAERIA 454

Query: 374 RGFNEAVNGFTDEGWTVMGNDGMDDVTVLV-------NSSPDKLMGLNLSFANGFPAVSN 426
           RGFNEAVNGF D+GW  +  DGMDDV+V         +S  +  M  N   +    A   
Sbjct: 455 RGFNEAVNGFPDDGWVPLMGDGMDDVSVAARPLNGQRHSGSNPAMSGN---SEALRASEG 511

Query: 427 AVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGS 486
            VLCAKASMLLQNVPPA+L++FLREHR+EW   ++++ SAA ++    S      G  G 
Sbjct: 512 GVLCAKASMLLQNVPPALLIKFLREHRAEWVPADLELSSAAMMRGANGSFMAP--GRNGE 569

Query: 487 QVILPLAH-----------TIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDEN 535
           ++I P+             +   EEF+EV+K        E  IM R    LQLCSG D N
Sbjct: 570 EIITPMPPVPLSGCYGTYLSDPSEEFLEVVKGGSQACGQESGIMSRQTLNLQLCSGTDTN 629

Query: 536 AVGTCAELIFAPID-ASFADDAPLLPSGFRIIPLDS--GKETSSPNRTLDLASALEIGPA 592
           AV   A+L+FAP+D AS ADD  +LPSGFR+IP+D+  G E    +RTLDLA++L+    
Sbjct: 630 AVAAVAQLVFAPVDAASSADDFSILPSGFRVIPIDAGLGVEGRPQSRTLDLAASLDTRDH 689

Query: 593 GNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPS 652
            NR   +  +   C RSV+T+ F+F+++ H +  +AT+AR YVRS+++ VQRVA+AL+P+
Sbjct: 690 SNREAVDGMSPGVCWRSVLTMTFQFSYKPHSENDMATVARVYVRSVVNYVQRVAMALAPA 749

Query: 653 NIS-SQAGLRTPLGTPEALTLARWICHSYRCYLGVDLL-KSSSEGSES--ILKNLWHHTD 708
             S SQ+        P  ++LA+ +  SYR  LG+DL  +  S+G+E+  + K++W+H +
Sbjct: 750 PPSRSQS-------QPFMVSLAQNLVRSYRLNLGMDLFSRQESQGTEAEDVFKSVWNHLE 802

Query: 709 AVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEK-IFDDHGRKALFAEFPQIMQQG 767
           A++CCS K  P F FAN+AGL+MLETT+  L D++ EK + D+H RK ++  F + ++Q 
Sbjct: 803 AIVCCSWKTSPAFIFANRAGLEMLETTMQGLFDLSWEKTVTDEHLRKCIYEGFSEAIRQN 862

Query: 768 FACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWS 812
           +     G+  ++ G+ + Y +A+AWKV++ ++   C+   F N S
Sbjct: 863 YCIFPTGVWTTASGKAIGYNKAIAWKVIDNDDKLQCVAITFFNCS 907



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/108 (70%), Positives = 91/108 (84%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D+ KYVRYT EQVEALER+Y+ECPKPSS RR QL++E PIL+NIEPKQIKVWFQNRRCR
Sbjct: 1   MDSSKYVRYTNEQVEALERVYNECPKPSSARRSQLLQEYPILANIEPKQIKVWFQNRRCR 60

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           EKQRKEA+RL  +N KL+A+NK+LMEEN+RL KQ ++L  E    RQ 
Sbjct: 61  EKQRKEATRLINMNAKLSALNKMLMEENERLMKQTTELSMEVQVLRQE 108


>gi|326493562|dbj|BAJ85242.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 460

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 256/456 (56%), Positives = 341/456 (74%), Gaps = 9/456 (1%)

Query: 343 LRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           LRQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VM  DG++DV + 
Sbjct: 2   LRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMAGDGIEDVIIA 61

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNID 462
            NS   K +  N +  N F A    V+CAKASMLLQ+VPPA+L+RFLREHRSEWAD N D
Sbjct: 62  CNS---KKIRSNNTAPNAFIA-PGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFD 117

Query: 463 VYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPR 521
            YSA+A+K   CSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG   + ++ ++ R
Sbjct: 118 AYSASALKSSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEG--QALDEGLLSR 175

Query: 522 DMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTL 581
           D+ LLQ C+G+DE ++G+C +L+FAPID  F DDAPL+ SGFR+IPLD   + +   RTL
Sbjct: 176 DIHLLQFCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGAPTGRTL 235

Query: 582 DLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISS 641
           DLAS+LE G    +A+ N   +   +RSV+TIAF+F +E H+Q+ VATMARQYVRSI+S+
Sbjct: 236 DLASSLEAGSTTLQASGN--ADDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSA 293

Query: 642 VQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILK 701
           VQRV++A+SPS     A  +   G PEA TLARWIC SYR +LGV+L + + E  ES+L+
Sbjct: 294 VQRVSMAISPSRSGLNAEQKIISGFPEAATLARWICQSYRFHLGVELFRQADEAGESLLR 353

Query: 702 NLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFP 761
            LW H DA++CCS K  PVFTFAN+ G++MLET+ VALQD++L+KIFD+ GRKAL++E P
Sbjct: 354 MLWDHEDAILCCSFKEKPVFTFANEMGINMLETSFVALQDLSLDKIFDEAGRKALYSEIP 413

Query: 762 QIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNE 797
           ++M+QGF  L GG+CLS MGR VS+E A+AWKV+ +
Sbjct: 414 KLMEQGFVYLPGGVCLSGMGRHVSFENAIAWKVVGD 449


>gi|109729910|tpg|DAA05769.1| TPA_inf: class III HD-Zip protein CNA2 [Medicago truncatula]
          Length = 287

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 245/287 (85%), Positives = 276/287 (96%)

Query: 528 LCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASAL 587
           LCSGMDENA+GTCAELIFAPIDASFADDAPLLPSGFRIIPL+SGKE+SSPNRTLDLASAL
Sbjct: 1   LCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLESGKESSSPNRTLDLASAL 60

Query: 588 EIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVAL 647
           +IGP GNRA+++ + NS C+RSVMTIAFEFA+ESHMQE+VA MARQYVRSIISSVQRVAL
Sbjct: 61  DIGPTGNRASSDNAGNSGCVRSVMTIAFEFAYESHMQENVACMARQYVRSIISSVQRVAL 120

Query: 648 ALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHT 707
           ALSPSN+SS AGLR+PLGTPEA TLA WIC+SYRCYLGV+LLKS++EG ES+LK+LWHH+
Sbjct: 121 ALSPSNLSSHAGLRSPLGTPEAQTLAHWICNSYRCYLGVELLKSNTEGKESVLKSLWHHS 180

Query: 708 DAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQG 767
           DAV+CC+LKA+PVFTF+NQAGLDMLETTLVALQDI+LEKIFDD+GRK LF+EFPQI+QQG
Sbjct: 181 DAVLCCTLKAMPVFTFSNQAGLDMLETTLVALQDISLEKIFDDNGRKTLFSEFPQIIQQG 240

Query: 768 FACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           FACLQGGICLSSMGRPVSYERAVAWKVLN+E+ AHCICFMF+NWSFV
Sbjct: 241 FACLQGGICLSSMGRPVSYERAVAWKVLNDEQNAHCICFMFVNWSFV 287


>gi|46408857|emb|CAD89206.1| HD-ZIP protein [Oryza sativa Japonica Group]
          Length = 451

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 252/454 (55%), Positives = 338/454 (74%), Gaps = 5/454 (1%)

Query: 346 MAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNS 405
           +AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW++MG DG++DV +  NS
Sbjct: 1   IAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMGGDGVEDVVIACNS 60

Query: 406 SPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYS 465
           +       N   A G P     ++CAKASMLLQ+VPPA+L+RFLREHRSEWAD NID Y 
Sbjct: 61  TKKIRSNSNAGIAFGAPG---GIICAKASMLLQSVPPAVLVRFLREHRSEWADYNIDAYL 117

Query: 466 AAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMF 524
           A+ +K   CSL G R   F GSQ+I+PLAHT+E+EE +EV++LEG   + ++A++ RD+ 
Sbjct: 118 ASTLKTSACSLTGLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIH 177

Query: 525 LLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLA 584
           LLQLC+G+DE +VG+  +L+FAPID  F D+ PL+ SGFR+IPLD   + +S  RTLDLA
Sbjct: 178 LLQLCTGIDEKSVGSSFQLVFAPID-DFPDETPLISSGFRVIPLDMKTDGASSGRTLDLA 236

Query: 585 SALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQR 644
           S+LE+G A  +A+ + S +   +RSV+TIAF+F +E H+Q+ VA MARQYVRSI+S+VQR
Sbjct: 237 SSLEVGSATAQASGDASADDCNLRSVLTIAFQFPYELHLQDSVAAMARQYVRSIVSAVQR 296

Query: 645 VALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLW 704
           V++A+SP      AG R   G PEA TLARW+C SY  +LGV+LL  S   +E +LK LW
Sbjct: 297 VSMAISPPQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGDAEQLLKMLW 356

Query: 705 HHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIM 764
           H+ DA++CCS K  PVFTFAN+AGLDMLET+LVALQD+TL++IFD+ GR+ALF+  P++M
Sbjct: 357 HYQDAILCCSFKEKPVFTFANKAGLDMLETSLVALQDLTLDRIFDEPGREALFSNIPKLM 416

Query: 765 QQGFACLQGGICLSSMGRPVSYERAVAWKVLNEE 798
           +QG   L  G+C+S MGR VS+++AVAWKVL E+
Sbjct: 417 EQGHVYLPSGVCMSGMGRHVSFDQAVAWKVLTED 450


>gi|110349536|gb|ABG73243.1| class III HD-Zip protein HDZ31B [Marsilea minuta]
          Length = 642

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 287/663 (43%), Positives = 407/663 (61%), Gaps = 61/663 (9%)

Query: 186 MKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP----------------- 228
           MKPGPDS+G  A++  C GVAA+ACGLV LEP +V EI+K+RP                 
Sbjct: 1   MKPGPDSIGAFALTRLCGGVAAQACGLVDLEPFKVGEIVKNRPLWLQDCRRLDILASFTA 60

Query: 229 -RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQH 281
            RG  +      +YA TTL  ARDFW LRYT  +EDGSLV+CERSL   Q    +P +  
Sbjct: 61  DRGGLVELVHTQMYAPTTLDAARDFWTLRYTCCMEDGSLVICERSLAAGQGVQEIPVMPG 120

Query: 282 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALR 341
           FVRAEML SG+LIRP E GG+++ ++D M+ +  S+ + +RPLY +S  LA++ T   L 
Sbjct: 121 FVRAEMLSSGFLIRPYEQGGAMVIVIDDMNFKSGSLLDGIRPLYTTSMTLARRMTYKVLC 180

Query: 342 QLRQMAQEVTQSSVNGWGRRPAA-LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVT 400
            LR  A+E  ++S+      PA  LR  S RL RGFN+AVN F DEGW  + NDG   V+
Sbjct: 181 HLRNFAKEKAEASLA--TNNPAVPLRGFSNRLIRGFNDAVNCFPDEGWVSIINDGPSTVS 238

Query: 401 VLVNSSPD-KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADN 459
           + +N  P+ K  G   S   G     N ++CAKAS+LLQ VPP +LL FLRE    WAD 
Sbjct: 239 IFINPPPNGKQFGGTESGTRG----RNGIICAKASLLLQGVPPPLLLHFLRERWIAWADI 294

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             DV S   ++     LP  +  +   QVI P+   +  +E +E+++++       D + 
Sbjct: 295 GTDVES---VRSSLNELPKKKPSSV--QVIQPI---VGQDEVLELVRVQKTRPLRVDEVF 346

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNR 579
             D  LLQLCS MDE   G  ++LIFAPIDAS  DDAPLLPSGFR++ L S KE S+ ++
Sbjct: 347 QPDSVLLQLCSSMDEIGTGEYSQLIFAPIDASVPDDAPLLPSGFRVMNLGSVKENSASSQ 406

Query: 580 TLDLASALEIGPAGNRATNNY-----STNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
           TLDLAS+LE     +R+TNN      S       S++TIAF++ +++  ++ +A   +++
Sbjct: 407 TLDLASSLE-----DRSTNNTIPMRSSRGIQDQSSILTIAFQYMYKAESRDVIALNVQRH 461

Query: 635 VRSIISSVQRVALALS---PSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKS 691
           V++++  +Q+ A++L    P+ ++ Q GL       EAL L + I  SYR Y+G +LL  
Sbjct: 462 VQALVDVLQQAAISLRLHLPTTMTGQCGL-------EALVLVQQITDSYRTYIGQELLPY 514

Query: 692 SSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDH 751
            +  +E + ++ W+  D+V+CC+ K LP F FANQA LDMLET L AL++++LE++F+D 
Sbjct: 515 RNGDAEGLFRSFWNLKDSVVCCAWKPLPEFIFANQAALDMLETNLSALRELSLEQMFNDG 574

Query: 752 GRKALFAEFPQIMQ-QGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFIN 810
            RK  +++ P  +Q +GFACL  GICL+S+GRPVS+ERA  WKV+  ++ +    FMF N
Sbjct: 575 CRKTDYSQPPPFIQKEGFACLPAGICLTSIGRPVSFERATGWKVITSDQNSRVAAFMFCN 634

Query: 811 WSF 813
           WSF
Sbjct: 635 WSF 637


>gi|110349534|gb|ABG73242.1| class III HD-Zip protein HDZ31A [Marsilea minuta]
          Length = 642

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 280/657 (42%), Positives = 399/657 (60%), Gaps = 49/657 (7%)

Query: 186 MKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP----------------- 228
           MKPGPDS+G  A++  C GVAA+ACG V LEP +V EI+K+RP                 
Sbjct: 1   MKPGPDSIGAFALTRLCGGVAAQACGFVDLEPFKVGEIVKNRPLWLQDCRRLDILASFTA 60

Query: 229 -RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQH 281
            RG ++      +Y+ TTL  ARDFW LRYT  +EDGSLV+CERSL   Q    +P +  
Sbjct: 61  DRGGSVELVHTQMYSPTTLDAARDFWTLRYTCCMEDGSLVICERSLAAGQGVQEIPVMAG 120

Query: 282 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALR 341
           FVRAEML SG+ IRP E GG+++ +VD M+ +  S+ E +RPLY +S  LA++ T   L 
Sbjct: 121 FVRAEMLSSGFFIRPYEQGGAMVIVVDDMNFKSGSLLEGIRPLYTTSMTLARRMTYKVLC 180

Query: 342 QLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
            LR  A+E  ++S+         LR  S RL RGFN+AVN F DEGW  + NDG   V++
Sbjct: 181 HLRNFAKEKAEASL-ATNNPTVPLRGFSNRLIRGFNDAVNCFPDEGWISIINDGPSTVSI 239

Query: 402 LVNSSPD-KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNN 460
            +N  P+ K +G   S   G     N ++CAKAS+LLQ VPP +L+ FLRE    WAD  
Sbjct: 240 FINPPPNGKQIGGTESGTRG----RNGIICAKASLLLQGVPPPLLIHFLRERWIAWADIG 295

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            DV S   ++  P  LP  +  +   QV+ P+   +  +E +EV++++       D +  
Sbjct: 296 ADVES---VRASPNELPKKKPSSV--QVLQPI---VGQDEVLEVVRVQKTRPLRVDEVFQ 347

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRT 580
            D  LLQLCS MDE   G  ++LIFAPIDAS  DD PLLPSGFR++ L S KE S+ ++T
Sbjct: 348 PDNVLLQLCSSMDEIGTGEYSQLIFAPIDASVPDDVPLLPSGFRVMNLGSVKENSASSQT 407

Query: 581 LDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIIS 640
           LDLAS+LE     N      S       S++TIAF++ +++  ++ +A   +++V++++ 
Sbjct: 408 LDLASSLEDQSTNNTIPMRSSRGIQDQSSILTIAFQYMYKAESRDVLALNLQRHVQALVD 467

Query: 641 SVQRVALALS---PSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE 697
            +Q+ A++L    P+ ++ Q GL       EAL L + I +SYR Y+G +LL   +  +E
Sbjct: 468 VLQQAAISLRLHLPTTMTGQCGL-------EALVLVQQITNSYRTYIGQELLPYRNGNAE 520

Query: 698 SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALF 757
            + ++ W+  D+V+CC+ K +P F FANQA LDMLET L AL+ ++LEK+F+D  RK  +
Sbjct: 521 GLFRSFWNLKDSVVCCAWKPMPEFIFANQAALDMLETNLSALRGLSLEKMFNDGCRKTDY 580

Query: 758 AEFPQIMQ-QGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
           ++ P  +Q +GFACL  GICL+S GRPVS+ERA  WKV+  ++ +    FMF NWSF
Sbjct: 581 SQPPPFIQKEGFACLPAGICLTSTGRPVSFERATGWKVITSDQNSSVAAFMFCNWSF 637


>gi|449533848|ref|XP_004173883.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like, partial
           [Cucumis sativus]
          Length = 293

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 244/293 (83%), Positives = 254/293 (86%), Gaps = 24/293 (8%)

Query: 30  ERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKL 89
           ERLY+ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ VNRKL
Sbjct: 1   ERLYYECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKL 60

Query: 90  TAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHP 149
           TAMN+LLMEENDRLQKQVSQLVYEN YFRQ TQ+ TLAT DTSCESVVTSGQ +LTP HP
Sbjct: 61  TAMNRLLMEENDRLQKQVSQLVYENSYFRQQTQNATLATTDTSCESVVTSGQQNLTPPHP 120

Query: 150 PRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARA 209
           P+DASPAGLLSIAEETL EFLSKATGTAVEWVQMPGMKPGPDS+GIVAISHGC+GVAARA
Sbjct: 121 PKDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARA 180

Query: 210 CGLVGLEPTRVAEILKDRP------------------RGSAI------LYALTTLAPARD 245
           CGLVGLEPTRVAEILKD P                   G  I      LYA TTLAPARD
Sbjct: 181 CGLVGLEPTRVAEILKDWPSWFRDCRAVDVLNVLSTGNGGTIELLYMQLYAPTTLAPARD 240

Query: 246 FWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCE 298
           FWLLRYTSVLEDGSLVVCERSL N QNGP+MPPVQ+FVRAEMLPSGYLIRPCE
Sbjct: 241 FWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVRAEMLPSGYLIRPCE 293


>gi|110349530|gb|ABG73240.1| class III HD-Zip protein HDZ31 [Ceratopteris richardii]
          Length = 773

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 312/790 (39%), Positives = 449/790 (56%), Gaps = 62/790 (7%)

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH---- 120
           WFQNRRCREKQRKE  RLQ  N KL AMN++L+EEN+RLQKQ +QL+ EN Y RQ     
Sbjct: 1   WFQNRRCREKQRKETGRLQHWNSKLNAMNQMLLEENERLQKQAAQLLVENQYLRQQLQLQ 60

Query: 121 ------TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKAT 174
                  Q   L T DTS ESVVTSGQH  +P H  ++ S +   ++AE+ LTEFL+KA+
Sbjct: 61  HPQVDLNQRAVLHTADTSSESVVTSGQHQHSPSHASQEWSVSQWSALAEKILTEFLAKAS 120

Query: 175 GTAVEWVQMPGMKPGPDSVGIVAISHGCSG-VAARACGLVGLEPTRVAEILKDR------ 227
           G     + +PGMKPGPDS+  + +   C G +AA+AC  V L   +VAEI+K+R      
Sbjct: 121 GGMAGGIPLPGMKPGPDSIEAM-VRPSCGGHIAAQACSYVDLGVYKVAEIIKNRHMWSYD 179

Query: 228 ------------PRGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKN 269
                         G  I      +YA + L  A DF  LRYT +LE+G+LVVCE SL  
Sbjct: 180 CKKQEIMTSFHADHGGFIELVHTQMYAPSKLVAAWDFRTLRYTCLLENGNLVVCEGSLAA 239

Query: 270 IQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 329
            Q    + P+  FVRAEMLPSG+LIRPCE GGSI+ +VD ++  P +    LRPLY++ST
Sbjct: 240 GQGAHEIAPLPGFVRAEMLPSGFLIRPCEQGGSIVMVVDDINSMPSTAANSLRPLYDTST 299

Query: 330 VLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRP-AALRALSQRLSRGFNEAVNGFTDEGW 388
           +LA + T   L  LR   ++  ++   G    P ++++  S RL RGFN+AVN   D+GW
Sbjct: 300 LLAWRLTCKVLNHLRAHPKDKGEA---GMLSNPISSVQGFSHRLVRGFNDAVNSSPDDGW 356

Query: 389 TVMGND-GMDDVTVLVNSSPDKL-MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILL 446
             + ++    +VT+ +  S   +  G N + A    A    ++CAKA +LL+N+  A L+
Sbjct: 357 VPLSSELSYSNVTIHIKPSHHSIEFGANDTEA----ATRGGIICAKAFLLLRNLSSAALM 412

Query: 447 RFLREHRSEWADNNIDVYSAAAIK-VGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVI 505
            FLRE    W D + D+    + K  G  +L   +  +           + E  E +EV+
Sbjct: 413 SFLRERWVAWMDLDADLSVRDSCKTTGNDNLLKRKFSSVKISES-----SSEQNEVLEVV 467

Query: 506 KLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRI 565
           +L+       + I   + F+LQ  S M++ +    A+L+FAPIDAS  DD+ LLPSGFR 
Sbjct: 468 RLQKPQPLKGENIPDFESFMLQFSSSMEDTSASAYAQLLFAPIDASVPDDSSLLPSGFRA 527

Query: 566 IPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQE 625
           + L+   E     +TLDLAS+LE  P   R  +     + C    +TI F++A+++  + 
Sbjct: 528 MHLNVCPERLVSLQTLDLASSLEDQP---RLQSQSPHETGC---ALTIVFQYAYKAENRS 581

Query: 626 HVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLG 685
            V   A+Q +++I+  +Q+ A++L        +G +   G   A+ L + +  SYR +LG
Sbjct: 582 VVTIKAQQNLQTIVELLQQAAVSLKSHPAPLISGSQFSTG---AVLLVQQMVDSYRNHLG 638

Query: 686 VDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLE 745
            +LL S+   SE + K  W+   AV+CC+ K LP F FAN + L MLE +L AL++++LE
Sbjct: 639 QELLISADGSSEGLFKAFWNFQHAVVCCAWKPLPEFIFANHSALAMLECSLFALKEMSLE 698

Query: 746 KIFDDHGRKALFAEFPQIMQ-QGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCI 804
           ++F+D   KA  ++ P  +Q +GFA L  G+CLSS G PVS+ERA+ WKV   + T    
Sbjct: 699 RMFNDGCSKADNSQPPPFLQEEGFARLPRGVCLSSRGHPVSFERAIGWKVTTVDPTVQVA 758

Query: 805 CFMFINWSFV 814
             MF NWSF 
Sbjct: 759 ALMFCNWSFT 768


>gi|294462854|gb|ADE76969.1| unknown [Picea sitchensis]
          Length = 353

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 237/347 (68%), Positives = 288/347 (82%), Gaps = 10/347 (2%)

Query: 435 MLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLA 493
           MLLQNVPPA+L+RFLREHRSEWAD+NID YSAAA+K  P S+PGSR G F GSQVILPLA
Sbjct: 1   MLLQNVPPALLVRFLREHRSEWADSNIDAYSAAALKASPYSVPGSRAGGFSGSQVILPLA 60

Query: 494 HTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFA 553
           HT+EHEEF+EVIKLEG G + E+A++ RDMFLLQLCSG+DENA G CAEL+FAPID SFA
Sbjct: 61  HTVEHEEFLEVIKLEGHGLTQEEAVLSRDMFLLQLCSGIDENAAGACAELVFAPIDESFA 120

Query: 554 DDAPLLPSGFRIIPLDSGKETSS-PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMT 612
           DDAPLLPSGFR+IPL+S  + S  PNRTLDLASALE+G AG R + +   NS  +RSV+T
Sbjct: 121 DDAPLLPSGFRVIPLESRTDGSGGPNRTLDLASALEVGSAGTRTSGDSGANSN-LRSVLT 179

Query: 613 IAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTL 672
           IAF+F +ESH++E+VA MARQYVRS+++SVQRVA+AL+PS +S+  G R P GTPEALTL
Sbjct: 180 IAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMALAPSRLSAHVGPRPPPGTPEALTL 239

Query: 673 ARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDML 732
           ARWIC SYR ++GVDL ++  E SES+LK LWHH+DA+MCCS+K+LPVFTFANQAGLDML
Sbjct: 240 ARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDML 299

Query: 733 ETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSS 779
           ETTLVALQDI+L+KI D++GRK+ F          ++    G+CLS+
Sbjct: 300 ETTLVALQDISLDKILDENGRKSFFYRL-------WSNYPTGLCLST 339


>gi|194708610|gb|ACF88389.1| unknown [Zea mays]
          Length = 390

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/391 (58%), Positives = 298/391 (76%), Gaps = 6/391 (1%)

Query: 429 LCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQ 487
           +CAKASMLLQNVPPA+L+RFLREHRSEWAD  ID YS A+++  P ++PG R G F G+Q
Sbjct: 1   MCAKASMLLQNVPPALLVRFLREHRSEWADPGIDAYSVASLRANPYTVPGLRAGGFMGNQ 60

Query: 488 VILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAP 547
           VILPLA T+EHEE +EVI+LEG G S E+ +M RDMFLLQLCSG+DE+A G CA+L+FAP
Sbjct: 61  VILPLARTLEHEESLEVIRLEGHGFSHEEVLMSRDMFLLQLCSGVDEDAPGACAQLVFAP 120

Query: 548 IDASFADDAPLLPSGFRIIPLDSGKET-SSPNRTLDLASALEIGPAGNRATNNYSTNSTC 606
           ID SFADDAPLLPSGFR+IPLD+  +  ++  RTLDLASALE+G  G+    +   + TC
Sbjct: 121 IDESFADDAPLLPSGFRVIPLDAKTDVPTATTRTLDLASALEVGSGGSGMRASCDGSGTC 180

Query: 607 -MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLG 665
             RSV+TIAF+F+FE+H++E VA MA+QYVR +++SVQRVA+A++PS + S+  L+ P G
Sbjct: 181 ATRSVLTIAFQFSFENHLRESVAAMAKQYVRGVMASVQRVAMAIAPSRLGSRIELKHPPG 240

Query: 666 TPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFT--F 723
           +PEAL LA WI  SYR + G ++  S +EG++S L   W H+DA++CCSLK  P FT  F
Sbjct: 241 SPEALALATWIGRSYRAHTGTEIRWSDTEGADSPLMLFWKHSDAILCCSLKP-PAFTLKF 299

Query: 724 ANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRP 783
           AN AG D+LETT+V +QD+ LE + D+ G+KAL A+ P IMQQG A L GG+C SSMGR 
Sbjct: 300 ANSAGFDILETTMVNIQDLPLEAVLDEEGQKALSAQLPAIMQQGLAYLPGGVCRSSMGRQ 359

Query: 784 VSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            SYE+AVAWKV+ ++    C+  M  NW+F+
Sbjct: 360 ASYEQAVAWKVVGDDGAPQCLALMLANWTFI 390


>gi|297596285|ref|NP_001042315.2| Os01g0200300 [Oryza sativa Japonica Group]
 gi|255672974|dbj|BAF04229.2| Os01g0200300 [Oryza sativa Japonica Group]
          Length = 394

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/396 (59%), Positives = 302/396 (76%), Gaps = 18/396 (4%)

Query: 435 MLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAH 494
           MLLQ+V P  LL+FLREHRS+WAD+N+D + A+ +K   C+LP SR+G F  QVILPLAH
Sbjct: 1   MLLQDVSPPSLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSRLGGFSGQVILPLAH 60

Query: 495 TIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD 554
           T E EEF+EVIKL G   + +D ++ RD+FLLQ+ +G++E++ GTC+ELIFAPIDASF+D
Sbjct: 61  TFEPEEFLEVIKL-GNASNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSD 119

Query: 555 DAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNR--------ATNNYSTNSTC 606
           D+PLLPSGFRIIP+DS  +TSSPN TLDLAS LE     +R             +  S+ 
Sbjct: 120 DSPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVNGGGGGCAAAAASSS 179

Query: 607 MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLR----- 661
            ++VMTIAF+FAF+ H+Q+ VA MARQY+R+IISSVQR+A+ALS S +            
Sbjct: 180 SKAVMTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAGAAAAQL 239

Query: 662 TPLGTPEALTLARWICHSYRCYLGVDLLKS--SSEGSESILKNLWHHTDAVMCCSLKALP 719
           +P+ TPEA TL RWIC SYR + G +L+KS  ++  +ESILK +WHH  A++CCSLKA+P
Sbjct: 240 SPV-TPEAATLPRWICQSYRFHFGDELIKSVDANSSNESILKAVWHHPSAILCCSLKAMP 298

Query: 720 VFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSS 779
           VFTFANQ+GLDMLETTLVALQD+TLEK+FDD GRK L  E P IM+QG AC++GG+C+SS
Sbjct: 299 VFTFANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQGMACMEGGVCVSS 358

Query: 780 MGRPVSYERAVAWKVLN-EEETAHCICFMFINWSFV 814
           +GR  SYE+AVAWKV++ +   AHCICFMFINW+F+
Sbjct: 359 VGRAASYEKAVAWKVVDGDGGGAHCICFMFINWTFL 394


>gi|110349538|gb|ABG73244.1| class III HD-Zip protein HDZ32 [Marsilea minuta]
          Length = 638

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 252/658 (38%), Positives = 379/658 (57%), Gaps = 57/658 (8%)

Query: 186 MKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP----------------- 228
           MKPGPDS+G   ++  C GVAA+AC L  +EP ++AE +KDRP                 
Sbjct: 1   MKPGPDSIGAFPLTRLCGGVAAQACCLADMEPFKIAETVKDRPSWLPDCRKLEILASFSA 60

Query: 229 -RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQH 281
            RG  +      +YA T L    +FW LRYT  +EDGSLVVCERSL   Q    MP    
Sbjct: 61  DRGGVVELVHTQMYAPTVLYVPWEFWSLRYTCCMEDGSLVVCERSLAVGQGVQDMPITPG 120

Query: 282 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALR 341
           F RAEML S +LIRP E G S++ +VD M+ +  S+ E  +PLY++S +LA+K T  AL 
Sbjct: 121 FARAEMLTSEFLIRPYEQGVSMVVVVDDMNFKSGSLLEGFQPLYDTSVILAKKATCRALS 180

Query: 342 QLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
            LR + +E  + S        ++LR LS RL RGFN+AVN F DEGW  + N G + ++V
Sbjct: 181 YLRSLVKEKAEVS-----NPSSSLRGLSHRLVRGFNDAVNCFPDEGWVSVINSGPNTLSV 235

Query: 402 LVN-SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNN 460
            +N +S  K +G N S           ++C KAS++L + PP++LL FL+E  + WA+ +
Sbjct: 236 HINPTSHSKQLGGNESGI----VTKGGIVCVKASLVLHDTPPSLLLCFLKEKWTTWAEFD 291

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
           +D+  A + ++    L   +  T   Q + PL   +  EE +E ++++    +  + +  
Sbjct: 292 MDLGYANS-RIFANDLSKKKFSTV--QKLQPL---VGQEEVVEFMRVQESDVARFNGVFT 345

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRT 580
            D FLLQ+C+  +E   G C +LI APIDAS ++   LLPSGFRI+ L+S KE    ++T
Sbjct: 346 PDKFLLQVCNNSEEVKPGECVQLICAPIDASMSEYVALLPSGFRILHLNSIKEKLMSSQT 405

Query: 581 LDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIIS 640
           LDLAS+LE G       N+ S   +   SV+ I F+F ++    + +   A+ +V++I+ 
Sbjct: 406 LDLASSLEYG--KTEMINSQSAQGS--NSVLNIVFQFLYKPENHDIIVPNAQHHVQAIVE 461

Query: 641 SVQRVALALSPSNISS-----QAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEG 695
            +Q  AL+L            ++G+       E L L + I  SYR Y+G +LL S    
Sbjct: 462 LLQHAALSLRSPPPPPLPLPVKSGM-------EHLILVQQIVESYRSYIGRELLSSPPGD 514

Query: 696 SESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKA 755
           +E++ K+ W   D+++CC+ K LP F FAN++ L+MLET LVAL+ + LE++F+D  R +
Sbjct: 515 AEAMFKSFWSLKDSIVCCAWKPLPQFIFANRSALEMLETDLVALRSLPLEQMFNDGNRNS 574

Query: 756 LFAEFPQ-IMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWS 812
            +++ P  ++++G+ACL  GICLSS G PVS++RA  WKV+  +++      MF NWS
Sbjct: 575 DYSQPPPFVLKEGYACLPSGICLSSKGNPVSFDRATGWKVITSDQSVQVGALMFCNWS 632


>gi|118482717|gb|ABK93277.1| unknown [Populus trichocarpa]
          Length = 294

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/294 (64%), Positives = 238/294 (80%), Gaps = 2/294 (0%)

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           M+LLQLCSG+DENA+G CA+L+FAPID SFADDAPLLPSGFR+IPLD   +  +  RTLD
Sbjct: 1   MYLLQLCSGVDENALGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKTDAPAATRTLD 60

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           LAS LE+GP G R  +   TNS  +RSV+TIAF+F FE+H +++VA MARQYVR +++SV
Sbjct: 61  LASTLEVGPGGARPASEADTNSYNLRSVLTIAFQFTFENHFRDNVAAMARQYVRGVVASV 120

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKN 702
           QRVA+A+SPS +SS  G ++   +PEALTLARWI  SYR + G +L +  S+  +++LK 
Sbjct: 121 QRVAMAISPSRLSSNMGPKSLPVSPEALTLARWIYRSYRIHTGGELFRVDSQAGDALLKR 180

Query: 703 LWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEF 760
           LWHH+DA+MCCSLK  A PVFTFANQAGLDMLETTLVALQDI L+KI D+ GRK L +EF
Sbjct: 181 LWHHSDAIMCCSLKTNASPVFTFANQAGLDMLETTLVALQDIMLDKILDEAGRKILCSEF 240

Query: 761 PQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            +IMQQG+A L  GIC+SSMGRPVSYE+A+AWKVLN++ + HC+ FMFINWSFV
Sbjct: 241 SKIMQQGYAYLPAGICVSSMGRPVSYEQAIAWKVLNDDNSNHCLAFMFINWSFV 294


>gi|226506820|ref|NP_001141882.1| uncharacterized protein LOC100274025 [Zea mays]
 gi|194706286|gb|ACF87227.1| unknown [Zea mays]
          Length = 292

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 185/292 (63%), Positives = 242/292 (82%)

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           M+LLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD+  +  S  RTLD
Sbjct: 1   MYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDPPSGTRTLD 60

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           LAS LE+G  G   T++ ++++   RSV+TIAF+F++E+H++E VA MARQYVR++++SV
Sbjct: 61  LASTLEVGSGGTTRTSSDASSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASV 120

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKN 702
           QRVA A++PS +  Q  ++   G+PEA TLARWI  SYR + G +LL++ ++ +++ LK 
Sbjct: 121 QRVARAIAPSRLGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKA 180

Query: 703 LWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQ 762
           LW H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKAL  E+P+
Sbjct: 181 LWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPK 240

Query: 763 IMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +MQQGFA L GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FMF+NWSFV
Sbjct: 241 LMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 292


>gi|224034025|gb|ACN36088.1| unknown [Zea mays]
          Length = 333

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/328 (57%), Positives = 254/328 (77%), Gaps = 1/328 (0%)

Query: 487 QVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFA 546
           Q+I+PLAHT+E+EE +EV++LEG   + ++A++ RD+ LLQLC+G+DE +VG+  +L+FA
Sbjct: 7   QMIMPLAHTVENEEILEVVRLEGQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFA 66

Query: 547 PIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTC 606
           PID  F DDAPL+ SGFR+IPLD   +  S  RTLDLAS+L++G A  +A+   S +   
Sbjct: 67  PIDEHFPDDAPLISSGFRVIPLDVKTDGVSSGRTLDLASSLDVGSAAPQASGE-SPDDCS 125

Query: 607 MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGT 666
           +RSV+TIAF+F +E H+Q+ VA MARQYVRS+IS+VQRV++A+SPS     AG R   G 
Sbjct: 126 LRSVLTIAFQFPYEMHLQDSVAAMARQYVRSVISAVQRVSMAISPSQSGLNAGHRMLSGF 185

Query: 667 PEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQ 726
           PEA TLARW+C SY  +LG++LL  S    E++LK LWHH DAV+CCS K  P+FTFAN+
Sbjct: 186 PEAATLARWVCQSYHYHLGMELLNQSDGAGEALLKMLWHHPDAVLCCSFKEKPMFTFANK 245

Query: 727 AGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSY 786
           AGLDMLET+LVALQD+TL+KIFD+ GRKALF++  ++M+QG+A L  G+C+S MGR VS+
Sbjct: 246 AGLDMLETSLVALQDLTLDKIFDESGRKALFSDISKLMEQGYAYLPSGVCMSGMGRHVSF 305

Query: 787 ERAVAWKVLNEEETAHCICFMFINWSFV 814
           ++AVAWKVL E+   HC+ F F+NWSFV
Sbjct: 306 DQAVAWKVLGEDSNIHCLAFCFVNWSFV 333


>gi|414871784|tpg|DAA50341.1| TPA: hypothetical protein ZEAMMB73_581465 [Zea mays]
          Length = 298

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 187/289 (64%), Positives = 239/289 (82%), Gaps = 4/289 (1%)

Query: 528 LCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASAL 587
            CSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD+  +  S  RTLDLAS L
Sbjct: 12  FCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDAKTDPPSGTRTLDLASTL 71

Query: 588 EIGPAGN-RATNNYSTNSTC-MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRV 645
           E+G  G  RA+++ S  STC  RSV+TIAF+F++E+H++E VA MARQYVR++++SVQRV
Sbjct: 72  EVGSGGTTRASSDAS--STCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRV 129

Query: 646 ALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWH 705
           A+A++PS I  Q  ++   G+PEA TLARWI  SYR + G +LL++ ++ +++ LK LW 
Sbjct: 130 AMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQ 189

Query: 706 HTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQ 765
           H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKAL  E+P+IMQ
Sbjct: 190 HSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQ 249

Query: 766 QGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           QGFA L GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FMF+NWSFV
Sbjct: 250 QGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 298


>gi|224150191|ref|XP_002336921.1| hypothetical protein POPTRDRAFT_292259 [Populus trichocarpa]
 gi|222837134|gb|EEE75513.1| hypothetical protein POPTRDRAFT_292259 [Populus trichocarpa]
          Length = 231

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 186/231 (80%), Positives = 196/231 (84%), Gaps = 24/231 (10%)

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------- 228
           TAVEWVQMPGMKPGPDS+GIVAISHGC+GVAARACGLVGLEPTRVAEILKDRP       
Sbjct: 1   TAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCR 60

Query: 229 -----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  I      LYA TTLAPARDF LLRYTSVLEDGSLVVCERSL N Q
Sbjct: 61  AVDVINAMSTANGGTIELLYMQLYAPTTLAPARDFLLLRYTSVLEDGSLVVCERSLNNTQ 120

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
           NGP+MPP QHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST+L
Sbjct: 121 NGPSMPPTQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLL 180

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNG 382
           AQKTTMAALR LRQ++QE++Q +V GWGRRPAALRALSQRLS+GFNEAVNG
Sbjct: 181 AQKTTMAALRHLRQISQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNG 231


>gi|54290691|dbj|BAD62361.1| putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|54291065|dbj|BAD61742.1| putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
          Length = 559

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 221/476 (46%), Positives = 282/476 (59%), Gaps = 119/476 (25%)

Query: 210 CGLVGLEPTRVAEILKDRPRGSAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKN 269
           CG    +P    EI K +   S  LYA TTLAPA DFWLLRYTS+L DGSLVVCERSL +
Sbjct: 125 CGKFLAQP----EIPKLKSVFSLQLYAPTTLAPAHDFWLLRYTSILGDGSLVVCERSLSS 180

Query: 270 IQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 329
            Q GP+MP VQ F+R EMLPSG+LIRP +GGGS+IHIVDHMDLEPWSVPEV+RPLYESS 
Sbjct: 181 KQGGPSMPLVQPFIRDEMLPSGFLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSA 240

Query: 330 VLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQR------------------ 371
           ++AQK +MA       +A + T+S + GWGR+ AAL ALSQ+                  
Sbjct: 241 LVAQKISMA-------VAYKDTRSVITGWGRKLAALHALSQKAHHVGLLNSRCFLVLAMN 293

Query: 372 -------------LSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFA 418
                        L RGFNE +NG  D+GW+V+ +DG+DDV + VNSS  K+ G N +F+
Sbjct: 294 LQLKSVKNNFACSLFRGFNEVLNGLADDGWSVIESDGIDDVCISVNSS--KVTGCNATFS 351

Query: 419 NGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPG 478
           +G   VS  VLCAKASMLLQ                                        
Sbjct: 352 SGLTIVSTGVLCAKASMLLQ---------------------------------------- 371

Query: 479 SRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVG 538
                    VILPLAHT E  EF+EVIKL G   + +D ++ RD+FLLQ+ +G++E++ G
Sbjct: 372 ---------VILPLAHTFEPAEFLEVIKL-GNTRNYQDTLVHRDLFLLQMYNGVEESSAG 421

Query: 539 TCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATN 598
           TC+ELIFAPIDASF+DD+PLLPS             ++P   +          +G   + 
Sbjct: 422 TCSELIFAPIDASFSDDSPLLPS-------------ATPWSRI----------SGINCSG 458

Query: 599 NYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNI 654
             +  S+  ++VMTIAF+F FESH+Q  V  MA+QY+ SIISSVQR+A+ LS S +
Sbjct: 459 CAAAASS--KAVMTIAFQFVFESHLQGSVPAMAQQYMCSIISSVQRIAVVLSSSRL 512


>gi|212721696|ref|NP_001131313.1| uncharacterized protein LOC100192627 [Zea mays]
 gi|194691156|gb|ACF79662.1| unknown [Zea mays]
          Length = 284

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 167/284 (58%), Positives = 215/284 (75%), Gaps = 1/284 (0%)

Query: 532 MDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGP 591
           MDE ++G+C +L+FAPID  F DDAPL+ SGFR+IPLD   +     RTLDLAS+LE+G 
Sbjct: 1   MDEKSMGSCFQLVFAPIDELFPDDAPLVSSGFRVIPLDIKTDGPPSGRTLDLASSLEVGA 60

Query: 592 AGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSP 651
              +   N S +   +RSV+TIAF+F +E+H+Q+ VA MARQYVRSI+S+VQRV++A+SP
Sbjct: 61  TTQQVAGNGSQDVCNLRSVLTIAFQFPYETHLQDTVAAMARQYVRSIVSAVQRVSMAISP 120

Query: 652 SNIS-SQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAV 710
           S+   + AG +   G+PEA TL RWIC SYR +LGVDL+  S +  ES+L+  W H DAV
Sbjct: 121 SHSGLNTAGQKLISGSPEAATLVRWICQSYRYHLGVDLVSHSDQAGESLLRMFWDHQDAV 180

Query: 711 MCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFAC 770
           +CCS K  PVFTF NQ G+DMLETTLVALQD+TL+KIFD+ GRKAL AE P++M+QG+A 
Sbjct: 181 LCCSFKEKPVFTFGNQMGVDMLETTLVALQDLTLDKIFDEPGRKALHAEVPKLMEQGYAY 240

Query: 771 LQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           L  G+CLS MGR VSYE+AVAWKVL E+   HC+ F F+NWSF+
Sbjct: 241 LPAGVCLSGMGRHVSYEQAVAWKVLGEDGNVHCLAFCFVNWSFI 284


>gi|125569402|gb|EAZ10917.1| hypothetical protein OsJ_00759 [Oryza sativa Japonica Group]
          Length = 507

 Score =  355 bits (910), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 178/239 (74%), Positives = 196/239 (82%), Gaps = 23/239 (9%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 1   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 60

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYF--------------- 117
           EKQRKE+SRLQA+NRKLTAMNKLLMEENDRLQKQVSQLVY++G                 
Sbjct: 61  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 120

Query: 118 --RQHTQSTTLAT-KDTSCESVVTSGQHHLTP-----QHPPRDASPAGLLSIAEETLTEF 169
                     LAT  DTSCESVVTSG HH        Q PPRDASPAGL+SIAEETLTEF
Sbjct: 121 PQAAAAAGHQLATATDTSCESVVTSGHHHQQQQHNVVQPPPRDASPAGLMSIAEETLTEF 180

Query: 170 LSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP 228
           LSKATGTAVEW+QMPGMKPGPDS+GI+AISHGC+GVAARACGLVG+EP +VAEILKDRP
Sbjct: 181 LSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRP 239



 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 160/312 (51%), Positives = 209/312 (66%), Gaps = 22/312 (7%)

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPID-ASFADDAPLLPSGFRIIPLDSGKETSSPN 578
           P  + ++ +  G    A   C  +   P   A    D PL     R + +D    TSSPN
Sbjct: 201 PDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPLWLRDCRSMDVD----TSSPN 256

Query: 579 RTLDLASALEIGPAGNR--------ATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
            TLDLAS LE     +R             +  S+  ++VMTIAF+FAF+ H+Q+ VA M
Sbjct: 257 CTLDLASTLEAATPRSRISGVNGGGGGCAAAAASSSSKAVMTIAFQFAFDGHLQDSVAAM 316

Query: 631 ARQYVRSIISSVQRVALALSPSNI-----SSQAGLRTPLGTPEALTLARWICHSYRCYLG 685
           ARQY+R+IISSVQR+A+ALS S +      + A   +P+ TPEA TL RWIC SYR + G
Sbjct: 317 ARQYMRNIISSVQRIAVALSSSRLVLPGAGAAAAQLSPV-TPEAATLPRWICQSYRFHFG 375

Query: 686 VDLLKS--SSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDIT 743
            +L+KS  ++  +ESILK +WHH  A++CCSLKA+PVFTFANQ+GLDMLETTLVALQD+T
Sbjct: 376 DELIKSVDANSSNESILKAVWHHPSAILCCSLKAMPVFTFANQSGLDMLETTLVALQDMT 435

Query: 744 LEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLN-EEETAH 802
           LEK+FDD GRK L  E P IM+QG AC++GG+C+SS+GR  SYE+AVAWKV++ +   AH
Sbjct: 436 LEKVFDDQGRKNLCTELPNIMEQGMACMEGGVCVSSVGRAASYEKAVAWKVVDGDGGGAH 495

Query: 803 CICFMFINWSFV 814
           CICFMFINW+F+
Sbjct: 496 CICFMFINWTFL 507


>gi|444436400|gb|AGE09568.1| HB8-like protein, partial [Eucalyptus cladocalyx]
          Length = 212

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 161/212 (75%), Positives = 191/212 (90%)

Query: 439 NVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEH 498
           NVPPA+LLRFLREHRSEWAD++ID YSAAAIK  PC++PG+R+G FGSQVILPLAHTIEH
Sbjct: 1   NVPPAVLLRFLREHRSEWADSSIDAYSAAAIKASPCNMPGTRIGGFGSQVILPLAHTIEH 60

Query: 499 EEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPL 558
           EEFMEV+KLE +GH  +D IMP D+FLLQLC+G+DENAVGTCAELIFAPIDASF+DDAP+
Sbjct: 61  EEFMEVVKLENMGHYRDDMIMPSDIFLLQLCNGVDENAVGTCAELIFAPIDASFSDDAPI 120

Query: 559 LPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFA 618
           +PSGFRIIPLD G + +SPNRTLDLASAL++GP GN+A  + S +S   +SVMTIAF+FA
Sbjct: 121 IPSGFRIIPLDPGSDAASPNRTLDLASALDVGPTGNKAVGDNSGHSGNTKSVMTIAFQFA 180

Query: 619 FESHMQEHVATMARQYVRSIISSVQRVALALS 650
           FE H+QE+VA+MARQY+RSII+SVQRVALALS
Sbjct: 181 FELHLQENVASMARQYLRSIIASVQRVALALS 212


>gi|414871785|tpg|DAA50342.1| TPA: hypothetical protein ZEAMMB73_581465 [Zea mays]
          Length = 251

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 153/241 (63%), Positives = 199/241 (82%), Gaps = 4/241 (1%)

Query: 576 SPNRTLDLASALEIGPAGN-RATNNYSTNSTC-MRSVMTIAFEFAFESHMQEHVATMARQ 633
           S  RTLDLAS LE+G  G  RA+++ S  STC  RSV+TIAF+F++E+H++E VA MARQ
Sbjct: 13  SGTRTLDLASTLEVGSGGTTRASSDAS--STCNTRSVLTIAFQFSYENHLRESVAAMARQ 70

Query: 634 YVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSS 693
           YVR++++SVQRVA+A++PS I  Q  ++   G+PEA TLARWI  SYR + G +LL++ +
Sbjct: 71  YVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDT 130

Query: 694 EGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGR 753
           + +++ LK LW H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GR
Sbjct: 131 QCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGR 190

Query: 754 KALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSF 813
           KAL  E+P+IMQQGFA L GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FMF+NWSF
Sbjct: 191 KALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSF 250

Query: 814 V 814
           V
Sbjct: 251 V 251


>gi|12002295|gb|AAG43283.1| HD-zipper protein [Oryza sativa]
          Length = 233

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 152/234 (64%), Positives = 190/234 (81%), Gaps = 4/234 (1%)

Query: 525 LLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLA 584
           LLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD   +  S  RTLDLA
Sbjct: 1   LLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDGKTDAPSATRTLDLA 60

Query: 585 SALEIGPAG-NRATNNYSTNSTC-MRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           S LE+G  G  RA+++  T+STC  RSV+TIAF+F++E+H++E VA MARQYVR++++SV
Sbjct: 61  STLEVGSGGTTRASSD--TSSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASV 118

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKN 702
           QRVA+A++PS +  Q   + P G+PEA TLARWI  SYR + G DLL++ S+  +S LK 
Sbjct: 119 QRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHTGADLLRTDSQSMDSSLKA 178

Query: 703 LWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKAL 756
           +W H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKAL
Sbjct: 179 MWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKAL 232


>gi|110349560|gb|ABG73255.1| class III HD-Zip protein HDZ31 [Austrobaileya scandens]
          Length = 181

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 150/181 (82%), Positives = 164/181 (90%), Gaps = 3/181 (1%)

Query: 16  GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 75
           GKYVRYT EQVEALER+Y ECPKPSS+RRQQL+REC IL+NIEPKQIKVWFQNRRCR KQ
Sbjct: 1   GKYVRYTAEQVEALERVYTECPKPSSMRRQQLVRECSILANIEPKQIKVWFQNRRCRVKQ 60

Query: 76  RKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCES 135
           RKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQL+YENGY RQ  Q+ ++AT DTSCES
Sbjct: 61  RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLLYENGYMRQQLQNASVATTDTSCES 120

Query: 136 VVTSGQHHLTP-QHP-PRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDS 192
           V+TSGQH   P QHP P+DA +PAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPD+
Sbjct: 121 VLTSGQHQQNPVQHPLPKDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDA 180

Query: 193 V 193
           +
Sbjct: 181 I 181


>gi|110349548|gb|ABG73249.1| class III HD-Zip protein HDZ35 [Pinus taeda]
          Length = 399

 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 155/400 (38%), Positives = 236/400 (59%), Gaps = 10/400 (2%)

Query: 418 ANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLP 477
           +N   +    +L  KAS+LLQ V P +L RFLREHR+EW D  ++       K   C   
Sbjct: 6   SNSLCSTDMGILSVKASLLLQEVSPTMLARFLREHRTEWMDYELNF----NYKASYCQ-N 60

Query: 478 GSRVGTFGS--QVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDEN 535
               G  GS  QV LPL  + + +E +EVIKLE  G   E  I   + F+LQLC+G+   
Sbjct: 61  MQTAGLHGSFRQVSLPLTQSADQDESLEVIKLESTGE--ETNIKSNETFILQLCNGISGT 118

Query: 536 AVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNR 595
                A+L+FAP+DAS +D+ PLLPSGFRII +++ K+    +RTLDL S LE G  G R
Sbjct: 119 TASGWAQLVFAPVDASLSDELPLLPSGFRIITINNYKDQCCLSRTLDLTSHLEGGSEGCR 178

Query: 596 ATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNIS 655
                  +  C  SV+T+AF+F +E+ +++ V   A  Y + ++  +++ A+ + P+  +
Sbjct: 179 FHTAGDPDVLCYSSVLTVAFQFKYEAQIRDLVTVKAHHYAQRVLEFIRKAAVLIMPACET 238

Query: 656 SQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESIL-KNLWHHTDAVMCCS 714
           SQ G    + + E+  L   I   YR + G+DL K+ +  +  IL K  W+H DA++CC+
Sbjct: 239 SQKGRNPSVCSLESKILVYHIVQKYRNFFGMDLFKTETAVNADILFKAFWNHKDAIICCT 298

Query: 715 LKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGG 774
            K +P + FANQAGLDMLETT  +L  +   K   ++ ++A + +  Q++QQ ++ +  G
Sbjct: 299 SKHIPEYVFANQAGLDMLETTAASLPGLPWLKTVPENEKQAAYKDLLQVLQQEYSYMPAG 358

Query: 775 ICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           I +SS GRPV+YERA+AW VL+ + +   +  MF+NWSF+
Sbjct: 359 IRISSNGRPVAYERAMAWNVLDSDNSICVVTVMFVNWSFL 398


>gi|41745612|gb|AAS10176.1| PHABULOSA-like protein [Antirrhinum majus]
          Length = 231

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 149/231 (64%), Positives = 169/231 (73%), Gaps = 24/231 (10%)

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR-------- 227
           TAV+WVQM GMKPGPDS+GIVAIS  CSG+AARACGLV LEPT+VAEILKDR        
Sbjct: 1   TAVDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLVSLEPTKVAEILKDRLSWYRDCR 60

Query: 228 --------PRGSA--------ILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                   P G+           YA TTLA ARDFW +RYT+ LEDGSLV+CERSL +  
Sbjct: 61  CLDIASAIPTGNGGTIELMYMQTYAPTTLASARDFWTMRYTTSLEDGSLVICERSLTSST 120

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GP  P    FVRAEMLPSG+LIRPC+GGGSIIHIVDH+DL+ WSVPEVLRPLYESS +L
Sbjct: 121 GGPAGPLATCFVRAEMLPSGFLIRPCDGGGSIIHIVDHLDLDAWSVPEVLRPLYESSKIL 180

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNG 382
           AQK T+AALR +RQ+AQE         GR+PA LR LSQRL RGFN+A+NG
Sbjct: 181 AQKITVAALRHIRQIAQESNGEIQCSGGRQPAVLRTLSQRLCRGFNDALNG 231


>gi|226530146|ref|NP_001146177.1| uncharacterized protein LOC100279747 [Zea mays]
 gi|219886071|gb|ACL53410.1| unknown [Zea mays]
          Length = 293

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 137/236 (58%), Positives = 178/236 (75%), Gaps = 5/236 (2%)

Query: 336 TMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDG 395
           T  ALR LRQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VM  DG
Sbjct: 2   TTTALRHLRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMCGDG 61

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVS-NAVLCAKASMLLQNVPPAILLRFLREHRS 454
           M+DV +  NS   K +  + + A GF A     ++CAKASMLLQ+VPPA+L+RFLREHRS
Sbjct: 62  MEDVIIACNS---KKIRSSSNPATGFGAPGPGGIICAKASMLLQSVPPAVLVRFLREHRS 118

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHS 513
           EWAD N D YSA+A+K  PCSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG   +
Sbjct: 119 EWADYNFDAYSASALKTSPCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQTLT 178

Query: 514 PEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD 569
            ++ ++ RD+ LLQLC+GMDE ++G+C +L+FAPID  F DDAPL+ SGFR+IPLD
Sbjct: 179 HDEGLLSRDIHLLQLCTGMDEKSMGSCFQLVFAPIDELFPDDAPLVSSGFRVIPLD 234


>gi|212721972|ref|NP_001131245.1| uncharacterized protein LOC100192557 [Zea mays]
 gi|194690982|gb|ACF79575.1| unknown [Zea mays]
          Length = 185

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 122/185 (65%), Positives = 157/185 (84%)

Query: 630 MARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLL 689
           MARQYVR++++SVQRVA+A++PS I  Q  ++   G+PEA TLARWI  SYR + G +LL
Sbjct: 1   MARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELL 60

Query: 690 KSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFD 749
           ++ ++ +++ LK LW H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI D
Sbjct: 61  RTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILD 120

Query: 750 DHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFI 809
           D GRKAL  E+P+IMQQGFA L GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FMF+
Sbjct: 121 DDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFV 180

Query: 810 NWSFV 814
           NWSFV
Sbjct: 181 NWSFV 185


>gi|218198891|gb|EEC81318.1| hypothetical protein OsI_24480 [Oryza sativa Indica Group]
          Length = 330

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 142/249 (57%), Positives = 172/249 (69%), Gaps = 38/249 (15%)

Query: 226 DRPRGSAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRA 285
           + P  S  LYA TTLAPA DFWLLRYTS+L DGSLVVCERSL + Q GP+MP VQ F+R 
Sbjct: 13  NMPPFSLQLYAPTTLAPAHDFWLLRYTSILGDGSLVVCERSLSSKQGGPSMPLVQPFIRD 72

Query: 286 EMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA-----AL 340
           EMLPSG+LIRP +GGGS+IHIVDHMDLEPWSVPEV+RPLYESS ++AQK +MA     +L
Sbjct: 73  EMLPSGFLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMASCKIQSL 132

Query: 341 RQLRQMAQEVTQSSVNGWGRRPAALRALSQR----------------------------- 371
           R LRQ+A + T+S + GWGR+ AAL ALSQ+                             
Sbjct: 133 RCLRQVAYKDTRSVITGWGRKLAALHALSQKAHHVGLLNSRCFLVLAMNLQFKSVKNNFA 192

Query: 372 --LSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVL 429
             L RGFNE +NG  D+GW+V+ +DG+DDV + VNSS  K+ G N +F++G   VS  VL
Sbjct: 193 CSLFRGFNEVLNGLADDGWSVIESDGIDDVCISVNSS--KVTGCNATFSSGLTIVSTGVL 250

Query: 430 CAKASMLLQ 438
           CAKASMLLQ
Sbjct: 251 CAKASMLLQ 259


>gi|326522983|dbj|BAJ88537.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 190

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/176 (74%), Positives = 155/176 (88%), Gaps = 8/176 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D+GKYVRYTP+QVE LER+Y +CPKP+S RRQQL+RECPIL+NIE +QIKVWFQNRRCR
Sbjct: 22  MDSGKYVRYTPDQVEMLERVYADCPKPTSSRRQQLLRECPILANIEARQIKVWFQNRRCR 81

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           +K RKE+SRL++VNRK++AMNKLLMEEN+RLQKQVSQLV+EN   RQ  Q+T++A  DTS
Sbjct: 82  DKLRKESSRLESVNRKVSAMNKLLMEENERLQKQVSQLVHENAQVRQQLQNTSMAN-DTS 140

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
           CES +T      TPQ+P RDAS P+GLLSIAEETLTEFLSKATGTA+EWVQMPGMK
Sbjct: 141 CESNLT------TPQNPIRDASNPSGLLSIAEETLTEFLSKATGTAIEWVQMPGMK 190


>gi|110349562|gb|ABG73256.1| class III HD-Zip protein HDZ32A [Austrobaileya scandens]
          Length = 129

 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 121/129 (93%), Positives = 125/129 (96%)

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST 124
           WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ TQ+T
Sbjct: 1   WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQTQNT 60

Query: 125 TLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
            + T DTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW+QMP
Sbjct: 61  AITTTDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWIQMP 120

Query: 185 GMKPGPDSV 193
           GMKPGPDS+
Sbjct: 121 GMKPGPDSI 129


>gi|110349564|gb|ABG73257.1| class III HD-Zip protein HDZ32B [Austrobaileya scandens]
          Length = 129

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 119/129 (92%), Positives = 123/129 (95%)

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST 124
           WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ TQ+T
Sbjct: 1   WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQQTQNT 60

Query: 125 TLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
            + T D SCESVVTSGQHHLTPQH PRDASPAGLLSIAEETLTEFLSKATGTAVEW+QMP
Sbjct: 61  AITTTDASCESVVTSGQHHLTPQHLPRDASPAGLLSIAEETLTEFLSKATGTAVEWIQMP 120

Query: 185 GMKPGPDSV 193
           GMKPGPDS+
Sbjct: 121 GMKPGPDSI 129


>gi|224165518|ref|XP_002338824.1| predicted protein [Populus trichocarpa]
 gi|222873518|gb|EEF10649.1| predicted protein [Populus trichocarpa]
          Length = 142

 Score =  251 bits (642), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 118/129 (91%), Positives = 123/129 (95%), Gaps = 1/129 (0%)

Query: 1   MAMSCKDGKTG-SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           MAMSCKDGK   ++DNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEP
Sbjct: 1   MAMSCKDGKNPINMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEP 60

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 119
           KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ
Sbjct: 61  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 120

Query: 120 HTQSTTLAT 128
           HTQ+  + T
Sbjct: 121 HTQNVRIYT 129


>gi|414871782|tpg|DAA50339.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 174

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 123/155 (79%), Positives = 130/155 (83%), Gaps = 5/155 (3%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
           G    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 20  GGAPQVDTGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQ 79

Query: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA 127
           NRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS+LVYENGY RQ   + + A
Sbjct: 80  NRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQLHNPSAA 139

Query: 128 TKDTSCESVVTSGQHHLTPQ----HPPRDA-SPAG 157
           T DTSCESVVTSGQHH         P RDA +PAG
Sbjct: 140 TTDTSCESVVTSGQHHQQQNPAAPRPQRDANNPAG 174


>gi|227809738|gb|ACP41061.1| unknown [Mesembryanthemum aitonis]
          Length = 125

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 116/125 (92%), Positives = 119/125 (95%)

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYENGYFRQ 
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRQQ 60

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           TQ   +A+KDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETL EFLSKATGTAV+W
Sbjct: 61  TQKPGIASKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVDW 120

Query: 181 VQMPG 185
           VQMPG
Sbjct: 121 VQMPG 125


>gi|227809744|gb|ACP41064.1| unknown [Carruanthus ringens]
 gi|227809746|gb|ACP41065.1| unknown [Cephalophyllum pillansii]
 gi|227809750|gb|ACP41067.1| unknown [Scopelogena bruynsii]
 gi|227809752|gb|ACP41068.1| unknown [Pleiospilos simulans]
 gi|227809754|gb|ACP41069.1| unknown [Delosperma echinatum]
          Length = 125

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 116/125 (92%), Positives = 118/125 (94%)

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYENGYFR  
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           T  T LA+KDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETL EFLSKATGTAV+W
Sbjct: 61  TSKTGLASKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVDW 120

Query: 181 VQMPG 185
           VQMPG
Sbjct: 121 VQMPG 125


>gi|227809740|gb|ACP41062.1| unknown [Mossia intervallaris]
          Length = 125

 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 115/125 (92%), Positives = 117/125 (93%)

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYENGYFR  
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           T  T LA+KDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETL EFLSKATGTAV+W
Sbjct: 61  TSKTGLASKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVDW 120

Query: 181 VQMPG 185
           VQM G
Sbjct: 121 VQMIG 125


>gi|227809742|gb|ACP41063.1| unknown [Polymita steenbokensis]
          Length = 125

 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 115/125 (92%), Positives = 117/125 (93%)

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYENGYFR  
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           T  T LA+KDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETL EFLSKATGTAV+W
Sbjct: 61  TSKTGLASKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVDW 120

Query: 181 VQMPG 185
           VQM G
Sbjct: 121 VQMLG 125


>gi|110349558|gb|ABG73254.1| class III HD-Zip protein HDZ33 [Cycas revoluta]
          Length = 129

 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 111/129 (86%), Positives = 118/129 (91%), Gaps = 2/129 (1%)

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST 124
           WFQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLVY+NG  RQ  Q+ 
Sbjct: 1   WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYDNGCLRQQIQAA 60

Query: 125 TLATKDTSCESVVTSG--QHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           ++AT DTSCESVVTSG  QHHLT QHPPRDASPAGLLSIAEETL +FLSKATGTAV+W+Q
Sbjct: 61  SMATTDTSCESVVTSGPRQHHLTSQHPPRDASPAGLLSIAEETLAQFLSKATGTAVDWIQ 120

Query: 183 MPGMKPGPD 191
           MPGMKPGPD
Sbjct: 121 MPGMKPGPD 129


>gi|227809756|gb|ACP41070.1| unknown [Drosanthemum speciosum]
          Length = 125

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 112/125 (89%), Positives = 114/125 (91%)

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKV   NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYENGYFR  
Sbjct: 1   QIKVVVSNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           T  T LA+KDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETL EFLSKATGTAV+W
Sbjct: 61  TSKTGLASKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVDW 120

Query: 181 VQMPG 185
           VQM G
Sbjct: 121 VQMLG 125


>gi|227809748|gb|ACP41066.1| unknown [Faucaria felina]
          Length = 112

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 104/112 (92%), Positives = 105/112 (93%)

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYENGYFR  
Sbjct: 1   QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRTQ 60

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSK 172
           T  T LA+KDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETL EFLSK
Sbjct: 61  TSKTGLASKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAEFLSK 112


>gi|222625450|gb|EEE59582.1| hypothetical protein OsJ_11886 [Oryza sativa Japonica Group]
          Length = 152

 Score =  215 bits (547), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 100/113 (88%), Positives = 104/113 (92%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
           G    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 23  GGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQ 82

Query: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           NRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS+LVYENGY RQ 
Sbjct: 83  NRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQ 135


>gi|148283423|gb|ABQ57292.1| hox32, partial [Oryza sativa Indica Group]
          Length = 148

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/143 (64%), Positives = 116/143 (81%), Gaps = 1/143 (0%)

Query: 357 GWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLS 416
           G GR+PA LR  SQRLSRGFN+AVNGF D+GW++M +DG +DVT+  NSSP+KL+G +++
Sbjct: 6   GGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAEDVTIAFNSSPNKLVGSHVN 65

Query: 417 FANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSL 476
            +  F A+   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD  +D YSAAA++  P ++
Sbjct: 66  SSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAAALRASPYAV 125

Query: 477 PGSRVGTF-GSQVILPLAHTIEH 498
           PG R G F GSQVILPLAHT+EH
Sbjct: 126 PGLRAGGFMGSQVILPLAHTLEH 148


>gi|91940097|gb|ABE66391.1| homeobox leucine-zipper protein [Striga asiatica]
          Length = 150

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 95/154 (61%), Positives = 120/154 (77%), Gaps = 7/154 (4%)

Query: 318 PEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFN 377
           PEVLRPLYESS VLAQ+TT+AALR +RQ+AQE +   V G GR+PA LR  SQRLSRGFN
Sbjct: 1   PEVLRPLYESSKVLAQRTTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFN 60

Query: 378 EAVNGFTDEGWTVMG-NDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASML 436
           +A+NGF D+GW+++  +DG DDV V V+S+       N++ A+   ++   VLCAKASML
Sbjct: 61  DAINGFNDDGWSLLNCDDGGDDVIVAVSSAK------NVTGASNNISMIGGVLCAKASML 114

Query: 437 LQNVPPAILLRFLREHRSEWADNNIDVYSAAAIK 470
           LQNVP A+L+RFLREHRSEWAD N+D YSAA++K
Sbjct: 115 LQNVPAAVLVRFLREHRSEWADFNVDAYSAASLK 148


>gi|227809762|gb|ACP41073.1| unknown [Carruanthus ringens]
 gi|227809770|gb|ACP41077.1| unknown [Cephalophyllum pillansii]
 gi|227809776|gb|ACP41080.1| unknown [Drosanthemum speciosum]
          Length = 120

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 93/125 (74%), Positives = 101/125 (80%), Gaps = 5/125 (4%)

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV ENG+ RQ 
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
            Q       D SCESVVT+ Q+ L   +     +PAGLLSIAEETL EFLSKATGTAV+W
Sbjct: 61  LQPALPPNTDGSCESVVTTSQYSLKDTN-----NPAGLLSIAEETLAEFLSKATGTAVDW 115

Query: 181 VQMPG 185
           VQMPG
Sbjct: 116 VQMPG 120


>gi|227809764|gb|ACP41074.1| unknown [Faucaria felina]
 gi|227809766|gb|ACP41075.1| unknown [Mossia intervallaris]
 gi|227809774|gb|ACP41079.1| unknown [Polymita steenbokensis]
          Length = 120

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/125 (73%), Positives = 100/125 (80%), Gaps = 5/125 (4%)

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV ENG+ RQ 
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
            Q       D SCESVVT+ Q+ L   +     +PAGLLSIAEETL EFLSKATGTAV+W
Sbjct: 61  LQPALPPNTDGSCESVVTTSQYSLKDTN-----NPAGLLSIAEETLAEFLSKATGTAVDW 115

Query: 181 VQMPG 185
           VQM G
Sbjct: 116 VQMLG 120


>gi|227809768|gb|ACP41076.1| unknown [Delosperma echinatum]
          Length = 120

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/125 (73%), Positives = 100/125 (80%), Gaps = 5/125 (4%)

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKE+SRLQ V RKL+AMNKLLMEENDRLQKQVSQLV ENG+ RQ 
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVIRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
            Q       D SCESVVT+ Q+ L   +     +PAGLLSIAEETL EFLSKATGTAV+W
Sbjct: 61  LQPALPPNTDGSCESVVTTSQYSLKDTN-----NPAGLLSIAEETLAEFLSKATGTAVDW 115

Query: 181 VQMPG 185
           VQMPG
Sbjct: 116 VQMPG 120


>gi|62319446|dbj|BAD94803.1| HD-Zip protein [Arabidopsis thaliana]
          Length = 132

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 82/126 (65%), Positives = 102/126 (80%), Gaps = 2/126 (1%)

Query: 691 SSSEGSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEKIF 748
           S S G +++LK LW H+DA++CCSLK  A PVFTFANQAGLDMLETTLVALQDI L+K  
Sbjct: 7   SQSCGGDTLLKQLWDHSDAILCCSLKTNASPVFTFANQAGLDMLETTLVALQDIMLDKTL 66

Query: 749 DDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMF 808
           DD GR+AL +EF +IMQQG+A L  GIC+SSMGRPVSYE+A  WKV+++ E+ HC+ F  
Sbjct: 67  DDSGRRALCSEFAKIMQQGYANLPAGICVSSMGRPVSYEQATVWKVVDDNESNHCLAFTL 126

Query: 809 INWSFV 814
           ++WSFV
Sbjct: 127 VSWSFV 132


>gi|297725273|ref|NP_001175000.1| Os06g0720500 [Oryza sativa Japonica Group]
 gi|255677403|dbj|BAH93728.1| Os06g0720500 [Oryza sativa Japonica Group]
          Length = 138

 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 89/130 (68%), Positives = 102/130 (78%), Gaps = 4/130 (3%)

Query: 210 CGLVGLEPTRVAEILKDRPRGSAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKN 269
           CG    +P    EI K +   S  LYA TTLAPA DFWLLRYTS+L DGSLVVCERSL +
Sbjct: 12  CGKFLAQP----EIPKLKSVFSLQLYAPTTLAPAHDFWLLRYTSILGDGSLVVCERSLSS 67

Query: 270 IQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 329
            Q GP+MP VQ F+R EMLPSG+LIRP +GGGS+IHIVDHMDLEPWSVPEV+RPLYESS 
Sbjct: 68  KQGGPSMPLVQPFIRDEMLPSGFLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSA 127

Query: 330 VLAQKTTMAA 339
           ++AQK +MA 
Sbjct: 128 LVAQKISMAV 137


>gi|227809772|gb|ACP41078.1| unknown [Scopelogena bruynsii]
          Length = 120

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 99/125 (79%), Gaps = 5/125 (4%)

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV ENG+ RQ 
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
            Q       D SCESVVT+  + L   +     +PAGLLSIAEETL EFLSKATGTAV+W
Sbjct: 61  LQPALPPNTDGSCESVVTTSHYSLKDTN-----NPAGLLSIAEETLAEFLSKATGTAVDW 115

Query: 181 VQMPG 185
           VQM G
Sbjct: 116 VQMLG 120


>gi|227809760|gb|ACP41072.1| unknown [Pleiospilos simulans]
          Length = 120

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 99/125 (79%), Gaps = 5/125 (4%)

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV ENG+ RQ 
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQ 60

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
            Q         SCESVVT+ Q+ L   +     +PAGLLSIAEETL EFLSKATGTAV+W
Sbjct: 61  LQPALPPNTHGSCESVVTTSQYSLKDTN-----NPAGLLSIAEETLAEFLSKATGTAVDW 115

Query: 181 VQMPG 185
           VQM G
Sbjct: 116 VQMLG 120


>gi|397135793|gb|AFO11393.1| revoluta, partial [Brassica carinata]
          Length = 143

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 97/148 (65%), Positives = 103/148 (69%), Gaps = 31/148 (20%)

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            D SC+SVVT      TPQH  RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMPGMK
Sbjct: 2   NDPSCDSVVT------TPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 55

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPR------------------ 229
           PGPDSVGI AIS  CSGVAARACGLV LEP ++AEILKDRP                   
Sbjct: 56  PGPDSVGIFAISQRCSGVAARACGLVSLEPVKIAEILKDRPSWFRDCRSLEVFTMFPAGN 115

Query: 230 -GSAIL-----YALTTLAPARDFWLLRY 251
            G+ +L     YA TTLAPARDFW LRY
Sbjct: 116 GGTIVLVYMQTYAPTTLAPARDFWTLRY 143


>gi|45593094|gb|AAS68136.1| homeodomain leucine zipper protein 32 [Oryza sativa Japonica Group]
          Length = 132

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/127 (63%), Positives = 99/127 (77%), Gaps = 1/127 (0%)

Query: 469 IKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQ 527
           ++  P ++PG R G F GSQVILPLAHT+EHEEF+EVI+LEG     ++ ++ RDM+LLQ
Sbjct: 1   LRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQ 60

Query: 528 LCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASAL 587
           LCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD   +  S  RTLDLAS L
Sbjct: 61  LCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDGKTDAPSATRTLDLASTL 120

Query: 588 EIGPAGN 594
           E+G  G 
Sbjct: 121 EVGSGGT 127


>gi|227809758|gb|ACP41071.1| unknown [Mesembryanthemum aitonis]
          Length = 118

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/126 (73%), Positives = 98/126 (77%), Gaps = 9/126 (7%)

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVSQLV ENG+ RQ 
Sbjct: 1   QIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVSENGFMRQQ 60

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVE 179
             +      D SCES  T      TPQ   RDA +PAGLLSIAEE L EFLSKATGTAV+
Sbjct: 61  LHTPPPPNADGSCESAAT------TPQL--RDANNPAGLLSIAEEALAEFLSKATGTAVD 112

Query: 180 WVQMPG 185
           WVQM G
Sbjct: 113 WVQMLG 118


>gi|397135778|gb|AFO11386.1| revoluta, partial [Brassica rapa subsp. pekinensis]
 gi|397135780|gb|AFO11387.1| revoluta, partial [Brassica rapa subsp. pekinensis]
 gi|397135784|gb|AFO11389.1| revoluta, partial [Brassica juncea]
 gi|397135790|gb|AFO11392.1| revoluta, partial [Brassica napus]
          Length = 143

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/148 (65%), Positives = 101/148 (68%), Gaps = 31/148 (20%)

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            D SC+SVVT      TPQH  RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMPGMK
Sbjct: 2   NDPSCDSVVT------TPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 55

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDSVGI AIS  CSGVAARACGLV LEP ++AEILKDRP                   
Sbjct: 56  PGPDSVGIFAISQRCSGVAARACGLVSLEPVKIAEILKDRPSWFRDCRSLEVFTMFPAGN 115

Query: 230 GSAI------LYALTTLAPARDFWLLRY 251
           G  I       YA TTLAPARDFW LRY
Sbjct: 116 GGTIELVYMQTYAPTTLAPARDFWTLRY 143


>gi|148729437|gb|ABR09121.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 83/151 (54%), Positives = 117/151 (77%), Gaps = 6/151 (3%)

Query: 485 GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELI 544
           GSQ+I+PL HTIEHEE +EV++LEG   + EDA M RD+ LLQ+C+G+DENAVG C+ELI
Sbjct: 7   GSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVGACSELI 66

Query: 545 FAPIDASFADDAPLLPSGFRIIPLDSGKET-----SSPNRTLDLASALEIGPAGNRATNN 599
           FAPI+  F DDAPL+PSGFR+IP+D+         ++ +RTLDL S+LE+GP+   A+ N
Sbjct: 67  FAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSPENASGN 126

Query: 600 YSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
            +++S+  R ++TIAF+F FE+++QE+VA M
Sbjct: 127 -TSSSSSSRCILTIAFQFPFENNLQENVAGM 156


>gi|148729435|gb|ABR09120.1| REV [Arabidopsis thaliana]
 gi|148729441|gb|ABR09123.1| REV [Arabidopsis thaliana]
 gi|148729443|gb|ABR09124.1| REV [Arabidopsis thaliana]
 gi|148729447|gb|ABR09126.1| REV [Arabidopsis thaliana]
 gi|148729449|gb|ABR09127.1| REV [Arabidopsis thaliana]
 gi|148729451|gb|ABR09128.1| REV [Arabidopsis thaliana]
 gi|148729453|gb|ABR09129.1| REV [Arabidopsis thaliana]
 gi|148729459|gb|ABR09132.1| REV [Arabidopsis thaliana]
 gi|148729461|gb|ABR09133.1| REV [Arabidopsis thaliana]
 gi|148729463|gb|ABR09134.1| REV [Arabidopsis thaliana]
 gi|148729475|gb|ABR09140.1| REV [Arabidopsis thaliana]
 gi|148729479|gb|ABR09142.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 84/151 (55%), Positives = 117/151 (77%), Gaps = 6/151 (3%)

Query: 485 GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELI 544
           GSQ+I+PL HTIEHEE +EV++LEG   + EDA M RD+ LLQ+C+G+DENAVG C+ELI
Sbjct: 7   GSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVGACSELI 66

Query: 545 FAPIDASFADDAPLLPSGFRIIPLDSGKET-----SSPNRTLDLASALEIGPAGNRATNN 599
           FAPI+  F DDAPL+PSGFR+IP+D+         ++ +RTLDL S+LE+GP+   A+ N
Sbjct: 67  FAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSPENASGN 126

Query: 600 YSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
            S++S+  R ++TIAF+F FE+++QE+VA M
Sbjct: 127 SSSSSS-SRCILTIAFQFPFENNLQENVAGM 156


>gi|397135786|gb|AFO11390.1| revoluta, partial [Brassica juncea]
          Length = 143

 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 96/148 (64%), Positives = 100/148 (67%), Gaps = 31/148 (20%)

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            D SC+SVVT      TPQH  RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMPGMK
Sbjct: 2   NDPSCDSVVT------TPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 55

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDSVGI AIS  CSGVAARACGLV LEP ++AEILKDRP                   
Sbjct: 56  PGPDSVGIFAISQRCSGVAARACGLVSLEPVKIAEILKDRPSWFRDCRSLEVFTMFPAGN 115

Query: 230 GSAI------LYALTTLAPARDFWLLRY 251
           G  I       YA TTLAPA DFW LRY
Sbjct: 116 GGTIELVYMQTYAPTTLAPASDFWTLRY 143


>gi|148729477|gb|ABR09141.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 83/151 (54%), Positives = 117/151 (77%), Gaps = 6/151 (3%)

Query: 485 GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELI 544
           GSQ+I+PL HTIEHEE +EV++LEG   + EDA M RD+ LLQ+C+G+DENAVG C+ELI
Sbjct: 7   GSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVGACSELI 66

Query: 545 FAPIDASFADDAPLLPSGFRIIPLDSGKET-----SSPNRTLDLASALEIGPAGNRATNN 599
           FAPI+  F DDAPL+PSGFR+IP+D+         ++ +RTLDL S+LE+GP+   A+ N
Sbjct: 67  FAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSPENASGN 126

Query: 600 YSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
             ++S+ +R ++TIAF+F FE+++QE+VA M
Sbjct: 127 SFSSSS-LRCILTIAFQFPFENNLQENVAGM 156


>gi|148729445|gb|ABR09125.1| REV [Arabidopsis thaliana]
 gi|148729455|gb|ABR09130.1| REV [Arabidopsis thaliana]
 gi|148729457|gb|ABR09131.1| REV [Arabidopsis thaliana]
 gi|148729465|gb|ABR09135.1| REV [Arabidopsis thaliana]
 gi|148729467|gb|ABR09136.1| REV [Arabidopsis thaliana]
 gi|148729469|gb|ABR09137.1| REV [Arabidopsis thaliana]
 gi|148729471|gb|ABR09138.1| REV [Arabidopsis thaliana]
 gi|148729473|gb|ABR09139.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 83/151 (54%), Positives = 116/151 (76%), Gaps = 6/151 (3%)

Query: 485 GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELI 544
           GSQ+I+PL HTIEHEE +EV++LEG   + EDA M RD+ LLQ+C+G+DENAVG C+ELI
Sbjct: 7   GSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVGACSELI 66

Query: 545 FAPIDASFADDAPLLPSGFRIIPLDSGKET-----SSPNRTLDLASALEIGPAGNRATNN 599
           FAPI+  F DDAPL+PSGFR+IP+D+         ++ +RTLDL S+LE+GP+   A+ N
Sbjct: 67  FAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSPENASGN 126

Query: 600 YSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
             ++S+  R ++TIAF+F FE+++QE+VA M
Sbjct: 127 SFSSSS-SRCILTIAFQFPFENNLQENVAGM 156


>gi|148729439|gb|ABR09122.1| REV [Arabidopsis thaliana]
          Length = 156

 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 84/151 (55%), Positives = 116/151 (76%), Gaps = 6/151 (3%)

Query: 485 GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELI 544
           GSQ+I+PL HTIEHEE +EV++LEG   + EDA M RD+ LLQ+C+G+DENAVG C+ELI
Sbjct: 7   GSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVGACSELI 66

Query: 545 FAPIDASFADDAPLLPSGFRIIPLDSGKET-----SSPNRTLDLASALEIGPAGNRATNN 599
           FAPI+  F DDAPL+PSGFR+IP+D+         ++ +RTLDL S+LE+GP+   A+ N
Sbjct: 67  FAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSPENASGN 126

Query: 600 YSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
            S+ S+  R ++TIAF+F FE+++QE+VA M
Sbjct: 127 SSSISS-SRCILTIAFQFPFENNLQENVAGM 156


>gi|118485037|gb|ABK94383.1| unknown [Populus trichocarpa]
          Length = 84

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/84 (90%), Positives = 80/84 (95%)

Query: 731 MLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAV 790
           MLETTLVALQDITLEKIFDD+GRK L +EFPQIMQQGF CL GGICLSSMGRPVSYERAV
Sbjct: 1   MLETTLVALQDITLEKIFDDNGRKTLCSEFPQIMQQGFMCLPGGICLSSMGRPVSYERAV 60

Query: 791 AWKVLNEEETAHCICFMFINWSFV 814
           AWKVLNEEE+AHCICFMF+NWSFV
Sbjct: 61  AWKVLNEEESAHCICFMFMNWSFV 84


>gi|326496473|dbj|BAJ94698.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 167

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/143 (58%), Positives = 96/143 (67%), Gaps = 24/143 (16%)

Query: 220 VAEILKDRP------------------RGSAI------LYALTTLAPARDFWLLRYTSVL 255
           V EILKDRP                   G  I      LYA TTL PARDFW LRYT+++
Sbjct: 1   VVEILKDRPSWFRDCRSLEVFTVLPGANGGTIELVYTQLYAPTTLVPARDFWTLRYTTIV 60

Query: 256 EDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPW 315
           EDGSLVVCERSL   + GP+    Q FVR EMLPSGYL+RPC+GGGSI+HIV H++ E W
Sbjct: 61  EDGSLVVCERSLSGSRGGPSAASAQQFVRDEMLPSGYLVRPCDGGGSIVHIVHHLEFEAW 120

Query: 316 SVPEVLRPLYESSTVLAQKTTMA 338
           ++PEVLRPLYESS V+AQK T A
Sbjct: 121 NIPEVLRPLYESSRVVAQKMTTA 143


>gi|170677980|gb|ACB31050.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677982|gb|ACB31051.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677984|gb|ACB31052.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677986|gb|ACB31053.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677988|gb|ACB31054.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677990|gb|ACB31055.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677992|gb|ACB31056.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677994|gb|ACB31057.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677996|gb|ACB31058.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170677998|gb|ACB31059.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678000|gb|ACB31060.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678002|gb|ACB31061.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678004|gb|ACB31062.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678006|gb|ACB31063.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678008|gb|ACB31064.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678010|gb|ACB31065.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678012|gb|ACB31066.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678014|gb|ACB31067.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678016|gb|ACB31068.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678018|gb|ACB31069.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678020|gb|ACB31070.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678022|gb|ACB31071.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678024|gb|ACB31072.1| ATHB-8, partial [Arabidopsis thaliana]
 gi|170678026|gb|ACB31073.1| ATHB-8, partial [Arabidopsis thaliana]
          Length = 85

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 76/84 (90%), Positives = 83/84 (98%)

Query: 145 TPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSG 204
           TPQH PRDASPAGLLSIA+ETLTEF+SKATGTAVEWVQMPGMKPGPDS+GIVAISHGC+G
Sbjct: 1   TPQHQPRDASPAGLLSIADETLTEFISKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTG 60

Query: 205 VAARACGLVGLEPTRVAEILKDRP 228
           +AARACGLVGL+PTRVAEILKD+P
Sbjct: 61  IAARACGLVGLDPTRVAEILKDKP 84


>gi|357533097|gb|AET82602.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533099|gb|AET82603.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533101|gb|AET82604.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533103|gb|AET82605.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533105|gb|AET82606.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533107|gb|AET82607.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533109|gb|AET82608.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533111|gb|AET82609.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533113|gb|AET82610.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533115|gb|AET82611.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533117|gb|AET82612.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533119|gb|AET82613.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533121|gb|AET82614.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533123|gb|AET82615.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533125|gb|AET82616.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533127|gb|AET82617.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533129|gb|AET82618.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533131|gb|AET82619.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533133|gb|AET82620.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533135|gb|AET82621.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533137|gb|AET82622.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533139|gb|AET82623.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533141|gb|AET82624.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533143|gb|AET82625.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533145|gb|AET82626.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533147|gb|AET82627.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533149|gb|AET82628.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533151|gb|AET82629.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533153|gb|AET82630.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533155|gb|AET82631.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533157|gb|AET82632.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533159|gb|AET82633.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533161|gb|AET82634.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533163|gb|AET82635.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533165|gb|AET82636.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533167|gb|AET82637.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533169|gb|AET82638.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533171|gb|AET82639.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533173|gb|AET82640.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533175|gb|AET82641.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533177|gb|AET82642.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533179|gb|AET82643.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533181|gb|AET82644.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533183|gb|AET82645.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533185|gb|AET82646.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533187|gb|AET82647.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533189|gb|AET82648.1| hypothetical protein, partial [Pinus contorta var. murrayana]
 gi|357533191|gb|AET82649.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533193|gb|AET82650.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533195|gb|AET82651.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533197|gb|AET82652.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533199|gb|AET82653.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533201|gb|AET82654.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533203|gb|AET82655.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533205|gb|AET82656.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533207|gb|AET82657.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533209|gb|AET82658.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533211|gb|AET82659.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533213|gb|AET82660.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533215|gb|AET82661.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533217|gb|AET82662.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533219|gb|AET82663.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533221|gb|AET82664.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533223|gb|AET82665.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533225|gb|AET82666.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533227|gb|AET82667.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533229|gb|AET82668.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533231|gb|AET82669.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533233|gb|AET82670.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533235|gb|AET82671.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533237|gb|AET82672.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533239|gb|AET82673.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533241|gb|AET82674.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533243|gb|AET82675.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533245|gb|AET82676.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533247|gb|AET82677.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533249|gb|AET82678.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533251|gb|AET82679.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533253|gb|AET82680.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533255|gb|AET82681.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533257|gb|AET82682.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533259|gb|AET82683.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533261|gb|AET82684.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533263|gb|AET82685.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533265|gb|AET82686.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533267|gb|AET82687.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533269|gb|AET82688.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533271|gb|AET82689.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533273|gb|AET82690.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533275|gb|AET82691.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533277|gb|AET82692.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533279|gb|AET82693.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533281|gb|AET82694.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533283|gb|AET82695.1| hypothetical protein, partial [Pinus contorta var. murrayana]
          Length = 95

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/95 (76%), Positives = 85/95 (89%)

Query: 720 VFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSS 779
           VFTFANQAGLDMLETTLVALQDI+LEKI D++GRK L ++F QIMQQG+A L  GIC+SS
Sbjct: 1   VFTFANQAGLDMLETTLVALQDISLEKILDENGRKRLCSDFTQIMQQGYAYLPSGICISS 60

Query: 780 MGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           MGRPVSY+RA+AWKVLN+E+  HCI FMF+NWSFV
Sbjct: 61  MGRPVSYDRAIAWKVLNDEDVIHCIAFMFLNWSFV 95


>gi|413917202|gb|AFW57134.1| hypothetical protein ZEAMMB73_352358 [Zea mays]
          Length = 806

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/158 (58%), Positives = 100/158 (63%), Gaps = 49/158 (31%)

Query: 70  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATK 129
           R REKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVS+LV +NG              
Sbjct: 110 RIREKQRKESSRLQIVNRKLSAMNKLLMEENDRLQKQVSRLVLDNG-------------- 155

Query: 130 DTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPG 189
                                       LL+I EETL EF+SKATGTAV WVQM GM+PG
Sbjct: 156 ----------------------------LLAIVEETLAEFMSKATGTAVNWVQMVGMEPG 187

Query: 190 PDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR 227
           PDSVGIVA+SH CSGVAARACGL       VAEI KDR
Sbjct: 188 PDSVGIVAVSHNCSGVAARACGL-------VAEIHKDR 218


>gi|46242611|gb|AAS83423.1| Hox10 [Oryza sativa Indica Group]
          Length = 110

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 67/110 (60%), Positives = 90/110 (81%)

Query: 705 HHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIM 764
           H+ DA++CCS K  PVFTFAN+AGLDMLET+LVALQD+TL++IFD+ G++ALF+  P++M
Sbjct: 1   HYQDAILCCSFKEKPVFTFANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLM 60

Query: 765 QQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +QG   L  G+C+S MGR VS+++AVAWKVL E+   HC+ F F+NWSFV
Sbjct: 61  EQGHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV 110


>gi|397135782|gb|AFO11388.1| truncated revoluta, partial [Brassica rapa]
          Length = 144

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/148 (61%), Positives = 100/148 (67%), Gaps = 11/148 (7%)

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            D SC+SVVT      TPQH  RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMPGMK
Sbjct: 2   NDPSCDSVVT------TPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 55

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPRGSAILYALT--TLAPARD 245
           PGPDSVGI AIS  CSGVAARACGLV LEP ++AEILKDRP       +L   T+ PA D
Sbjct: 56  PGPDSVGIFAISQRCSGVAARACGLVSLEPVKIAEILKDRPSWFRDCRSLEVFTMFPAGD 115

Query: 246 FWL--LRYTSVLEDGSLVVCERSLKNIQ 271
                L Y       +L  C R L  ++
Sbjct: 116 GGTIELVYMQTYAPTTLASCPRFLGTLR 143


>gi|170678028|gb|ACB31074.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678034|gb|ACB31077.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678036|gb|ACB31078.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678038|gb|ACB31079.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678042|gb|ACB31081.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678046|gb|ACB31083.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678048|gb|ACB31084.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678050|gb|ACB31085.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678052|gb|ACB31086.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678060|gb|ACB31090.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678062|gb|ACB31091.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678066|gb|ACB31093.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678068|gb|ACB31094.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678070|gb|ACB31095.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678072|gb|ACB31096.1| ATHB-15, partial [Arabidopsis thaliana]
          Length = 81

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 72/81 (88%), Positives = 76/81 (93%)

Query: 141 QHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISH 200
           QH L  Q+P RDASPAGLLSIAEETL EFLSKATGTAVEWVQMPGMKPGPDS+GI+AISH
Sbjct: 1   QHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISH 60

Query: 201 GCSGVAARACGLVGLEPTRVA 221
           GC+GVAARACGLVGLEPTRVA
Sbjct: 61  GCTGVAARACGLVGLEPTRVA 81


>gi|170678030|gb|ACB31075.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678032|gb|ACB31076.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678040|gb|ACB31080.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678044|gb|ACB31082.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678054|gb|ACB31087.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678056|gb|ACB31088.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678058|gb|ACB31089.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678064|gb|ACB31092.1| ATHB-15, partial [Arabidopsis thaliana]
 gi|170678074|gb|ACB31097.1| ATHB-15, partial [Arabidopsis thaliana]
          Length = 81

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/81 (87%), Positives = 76/81 (93%)

Query: 141 QHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISH 200
           QH L  Q+P RDASPAGLLSIAEETL EFLSKATGTAVEW+QMPGMKPGPDS+GI+AISH
Sbjct: 1   QHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWIQMPGMKPGPDSIGIIAISH 60

Query: 201 GCSGVAARACGLVGLEPTRVA 221
           GC+GVAARACGLVGLEPTRVA
Sbjct: 61  GCTGVAARACGLVGLEPTRVA 81


>gi|3868829|dbj|BAA34235.1| CRHB1 [Ceratopteris richardii]
          Length = 157

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 73/109 (66%), Positives = 88/109 (80%)

Query: 16  GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 75
           GKYVRYT EQV+ALE+LY ECPKP+ ++RQQLIREC IL N++ KQIKVWFQNRRCREKQ
Sbjct: 19  GKYVRYTSEQVQALEKLYCECPKPTLLQRQQLIRECSILRNVDHKQIKVWFQNRRCREKQ 78

Query: 76  RKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST 124
           RKE  RLQ++N KLT +N +LMEEN +LQ+ V+QLV  N   R+   ST
Sbjct: 79  RKEWCRLQSLNGKLTPINTMLMEENVQLQQHVAQLVTINHALRRQLSST 127


>gi|397135788|gb|AFO11391.1| truncated revoluta, partial [Brassica juncea]
          Length = 141

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/101 (76%), Positives = 83/101 (82%), Gaps = 6/101 (5%)

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
            D SC+S + +     TPQH  RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMPGMK
Sbjct: 2   NDPSCDSPLKT-----TPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 56

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP 228
           PGPDSVGI AIS  CSGVAARACGLV LEP ++AEILKDRP
Sbjct: 57  PGPDSVGIFAISQRCSGVAARACGLVSLEPVKIAEILKDRP 97


>gi|10998865|gb|AAG26011.1|AC022354_8 HD-zip-like protein, 3' partial [Arabidopsis thaliana]
          Length = 69

 Score =  147 bits (372), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/69 (95%), Positives = 67/69 (97%)

Query: 1  MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
          MAMSCKDGK G LDNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1  MAMSCKDGKLGCLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPK 60

Query: 61 QIKVWFQNR 69
          QIKVWFQNR
Sbjct: 61 QIKVWFQNR 69


>gi|194705370|gb|ACF86769.1| unknown [Zea mays]
          Length = 85

 Score =  137 bits (345), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 58/85 (68%), Positives = 72/85 (84%), Gaps = 1/85 (1%)

Query: 731 MLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAV 790
           MLETTLVALQDI LE++FDD GRK L AE P +M+QGFAC+ GG+C+S +GRPVSYE+A+
Sbjct: 1   MLETTLVALQDIALERVFDDQGRKNLCAELPGVMEQGFACVPGGMCVSGLGRPVSYEKAL 60

Query: 791 AWKVLNEEETA-HCICFMFINWSFV 814
           AWKVL++     HC+CFMF+NWSFV
Sbjct: 61  AWKVLDDGSGGVHCVCFMFVNWSFV 85


>gi|170678818|gb|ACB31469.1| REV, partial [Arabidopsis thaliana]
 gi|170678820|gb|ACB31470.1| REV, partial [Arabidopsis thaliana]
 gi|170678822|gb|ACB31471.1| REV, partial [Arabidopsis thaliana]
 gi|170678824|gb|ACB31472.1| REV, partial [Arabidopsis thaliana]
 gi|170678826|gb|ACB31473.1| REV, partial [Arabidopsis thaliana]
 gi|170678828|gb|ACB31474.1| REV, partial [Arabidopsis thaliana]
 gi|170678830|gb|ACB31475.1| REV, partial [Arabidopsis thaliana]
 gi|170678832|gb|ACB31476.1| REV, partial [Arabidopsis thaliana]
 gi|170678834|gb|ACB31477.1| REV, partial [Arabidopsis thaliana]
 gi|170678836|gb|ACB31478.1| REV, partial [Arabidopsis thaliana]
 gi|170678838|gb|ACB31479.1| REV, partial [Arabidopsis thaliana]
 gi|170678840|gb|ACB31480.1| REV, partial [Arabidopsis thaliana]
 gi|170678842|gb|ACB31481.1| REV, partial [Arabidopsis thaliana]
 gi|170678844|gb|ACB31482.1| REV, partial [Arabidopsis thaliana]
 gi|170678846|gb|ACB31483.1| REV, partial [Arabidopsis thaliana]
 gi|170678848|gb|ACB31484.1| REV, partial [Arabidopsis thaliana]
 gi|170678850|gb|ACB31485.1| REV, partial [Arabidopsis thaliana]
 gi|170678852|gb|ACB31486.1| REV, partial [Arabidopsis thaliana]
 gi|170678854|gb|ACB31487.1| REV, partial [Arabidopsis thaliana]
 gi|170678856|gb|ACB31488.1| REV, partial [Arabidopsis thaliana]
 gi|170678858|gb|ACB31489.1| REV, partial [Arabidopsis thaliana]
 gi|170678860|gb|ACB31490.1| REV, partial [Arabidopsis thaliana]
 gi|170678862|gb|ACB31491.1| REV, partial [Arabidopsis thaliana]
 gi|170678864|gb|ACB31492.1| REV, partial [Arabidopsis thaliana]
          Length = 82

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 68/79 (86%), Positives = 72/79 (91%), Gaps = 1/79 (1%)

Query: 151 RDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARA 209
           RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPDSVGI AIS  C+GVAARA
Sbjct: 2   RDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQRCNGVAARA 61

Query: 210 CGLVGLEPTRVAEILKDRP 228
           CGLV LEP ++AEILKDRP
Sbjct: 62  CGLVSLEPMKIAEILKDRP 80


>gi|414883577|tpg|DAA59591.1| TPA: putative receptor-like kinase family protein, partial [Zea
           mays]
          Length = 665

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/150 (52%), Positives = 94/150 (62%), Gaps = 18/150 (12%)

Query: 70  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATK 129
           RCREKQRKE+SRLQ VNRKL+AMNKLLMEENDRLQKQVS+LV +NGY +    S ++AT 
Sbjct: 462 RCREKQRKESSRLQIVNRKLSAMNKLLMEENDRLQKQVSRLVLDNGYMKNRLHSPSVATT 521

Query: 130 DTSCESVVTSGQHHLTPQHPPRDAS-------PAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           DT+CE VVTSGQH+   Q P   AS       P+ ++      +   L   T + V  + 
Sbjct: 522 DTTCECVVTSGQHN---QQPSSSASSTKGCEQPSRIVCYPNMVMHLMLISLTVSNVILIA 578

Query: 183 MPGMKPGPDSVGIVAISHGCSGVAARACGL 212
                      G  A+SH CSGVAARACGL
Sbjct: 579 AWS--------GFRAVSHNCSGVAARACGL 600


>gi|170678722|gb|ACB31421.1| PHB, partial [Arabidopsis thaliana]
 gi|170678724|gb|ACB31422.1| PHB, partial [Arabidopsis thaliana]
 gi|170678726|gb|ACB31423.1| PHB, partial [Arabidopsis thaliana]
 gi|170678728|gb|ACB31424.1| PHB, partial [Arabidopsis thaliana]
 gi|170678730|gb|ACB31425.1| PHB, partial [Arabidopsis thaliana]
 gi|170678732|gb|ACB31426.1| PHB, partial [Arabidopsis thaliana]
 gi|170678734|gb|ACB31427.1| PHB, partial [Arabidopsis thaliana]
 gi|170678736|gb|ACB31428.1| PHB, partial [Arabidopsis thaliana]
 gi|170678738|gb|ACB31429.1| PHB, partial [Arabidopsis thaliana]
 gi|170678740|gb|ACB31430.1| PHB, partial [Arabidopsis thaliana]
 gi|170678742|gb|ACB31431.1| PHB, partial [Arabidopsis thaliana]
 gi|170678744|gb|ACB31432.1| PHB, partial [Arabidopsis thaliana]
 gi|170678746|gb|ACB31433.1| PHB, partial [Arabidopsis thaliana]
 gi|170678748|gb|ACB31434.1| PHB, partial [Arabidopsis thaliana]
 gi|170678750|gb|ACB31435.1| PHB, partial [Arabidopsis thaliana]
 gi|170678752|gb|ACB31436.1| PHB, partial [Arabidopsis thaliana]
 gi|170678754|gb|ACB31437.1| PHB, partial [Arabidopsis thaliana]
 gi|170678756|gb|ACB31438.1| PHB, partial [Arabidopsis thaliana]
 gi|170678758|gb|ACB31439.1| PHB, partial [Arabidopsis thaliana]
 gi|170678760|gb|ACB31440.1| PHB, partial [Arabidopsis thaliana]
 gi|170678762|gb|ACB31441.1| PHB, partial [Arabidopsis thaliana]
 gi|170678764|gb|ACB31442.1| PHB, partial [Arabidopsis thaliana]
 gi|170678766|gb|ACB31443.1| PHB, partial [Arabidopsis thaliana]
 gi|170678768|gb|ACB31444.1| PHB, partial [Arabidopsis thaliana]
          Length = 82

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/75 (84%), Positives = 68/75 (90%)

Query: 154 SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLV 213
           +PAGLLSIAEE L EFLSKATGTAV+WVQM GMKPGPDS+GIVAIS  CSG+AARACGLV
Sbjct: 1   NPAGLLSIAEEALAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLV 60

Query: 214 GLEPTRVAEILKDRP 228
            LEP +VAEILKDRP
Sbjct: 61  SLEPMKVAEILKDRP 75


>gi|148283425|gb|ABQ57293.1| hox33, partial [Oryza sativa Indica Group]
          Length = 106

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 62/106 (58%), Positives = 82/106 (77%), Gaps = 1/106 (0%)

Query: 388 WTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLR 447
           W+++ +DG +D+T+ VNSSP+KL+G ++S    F  V   +LCAKASMLLQNVPPA+L+R
Sbjct: 1   WSLLSSDGSEDITISVNSSPNKLVGSHVSPNPLFSTVGGGILCAKASMLLQNVPPALLVR 60

Query: 448 FLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPL 492
           FLREHRSEWAD  +D YSAA+++  P ++PG R   F GSQVILPL
Sbjct: 61  FLREHRSEWADPGVDAYSAASLRASPYAVPGLRTSGFMGSQVILPL 106


>gi|147800352|emb|CAN62139.1| hypothetical protein VITISV_039239 [Vitis vinifera]
          Length = 708

 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 168/746 (22%), Positives = 278/746 (37%), Gaps = 192/746 (25%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 45  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 100

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 105
            +R E S L+A N KL A N    E                            EN RL+ 
Sbjct: 101 HERHENSNLRAENEKLRAENIRYKEALSNATCPHCGGPASIGEMSFDEQHLRIENARLRD 160

Query: 106 Q----VSQLVYE----NGYFRQHTQSTTL--ATKDTSCESVVTS----GQHHLTPQHPPR 151
           +     SQ+ +E      +   HT S +L     +   +S +      G   L     P 
Sbjct: 161 EDFWDCSQVCWEPMVSYPHLSTHTSSRSLDLGVGNFGAQSGIVGDMYGGGDLLRSVSLPT 220

Query: 152 DASPAGLLSIAEETLTEFLSKATGTAVEWVQMPG-----------MKPGPDSVGIVAISH 200
           +A    ++ +A   + E +  A      W+               ++  P  +G   +  
Sbjct: 221 EADKPMIVELAVAAMEELIRMAQAGEPLWIPTSDNSTEILSEDEYLRTFPRGIGPKPL-- 278

Query: 201 GCSGVAARACGLVGLEPTRVAEILKDRPRGSAILYALTT--------------------- 239
           G    A+R   +V +    + EIL D  + S++   + +                     
Sbjct: 279 GLKSEASRETAVVIMNHISLVEILMDVNQWSSVFSGIVSRAMTLEVLSTGVAGNYNGALQ 338

Query: 240 -----------LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
                      L P R+ + +RY     DG+  V + SL N+++GP         R    
Sbjct: 339 VMTAEFQVPSPLVPTRENYFVRYCKHHPDGTWAVVDVSLDNLRSGP-------ITRNRRR 391

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG LI+    G S +  V+H++++  +V  + RPL  S      K  +A L RQ  ++A
Sbjct: 392 PSGCLIQELPNGYSKVIWVEHVEVDDRAVHNIYRPLVNSGLAFGAKRWVATLDRQCERLA 451

Query: 348 QEVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
             +  +   G         GR+  ++  L++R+   F   V   T   WT +   G DDV
Sbjct: 452 SAMASNIPAGDVGVITSPEGRK--SMLKLAERMVMSFCAGVGASTTHTWTTLSGSGADDV 509

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR--EHRSEWA 457
            V+   S D             P     ++ + A+     VPP  +  FLR    RSEW 
Sbjct: 510 RVMTRKSMDD------------PGRPPGIVLSAATSFWIPVPPKRVFDFLRAENSRSEW- 556

Query: 458 DNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA 517
               D+ S   +                   +  +AH     +    + L  V  +    
Sbjct: 557 ----DILSNGGL-------------------VQEMAHIANGRDPGNCVSLLRVNSANSSQ 593

Query: 518 IMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPL 568
               +M +LQ     +     T + +I+AP+D             D   LLPSGF I+P 
Sbjct: 594 ---SNMLILQ-----ESCTDPTGSYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPD 645

Query: 569 DSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVA 628
            +          L     L++G  G               S++T+AF+   +S     ++
Sbjct: 646 GA---------VLHGGGILDVGSGG---------------SLLTVAFQILVDSAPTAKLS 681

Query: 629 TMARQYVRSIIS-SVQRVALALSPSN 653
             +   V S+I  +V+R+  A+S  N
Sbjct: 682 LGSVATVNSLIKCTVERIKAAVSCEN 707


>gi|413921242|gb|AFW61174.1| hypothetical protein ZEAMMB73_060529 [Zea mays]
          Length = 570

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/123 (47%), Positives = 86/123 (69%)

Query: 572 KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMA 631
           ++  S  RTLDLAS+L++G A  +A+ +   +   +R V+TI F+F +E+H+Q+ VATMA
Sbjct: 106 QDGVSSGRTLDLASSLDVGSAAPQASGDAPPDDYNLRYVLTITFQFPYETHLQDSVATMA 165

Query: 632 RQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKS 691
            QYV S++S+VQRV++A+SPS     AG R   G PEA TLARW+C SY  +LGV+ L +
Sbjct: 166 HQYVCSVVSTVQRVSMAISPSESGLNAGQRMLSGFPEAATLARWVCQSYHYHLGVETLFA 225

Query: 692 SSE 694
           S +
Sbjct: 226 SGD 228


>gi|170678770|gb|ACB31445.1| PHV, partial [Arabidopsis thaliana]
 gi|170678772|gb|ACB31446.1| PHV, partial [Arabidopsis thaliana]
 gi|170678774|gb|ACB31447.1| PHV, partial [Arabidopsis thaliana]
 gi|170678776|gb|ACB31448.1| PHV, partial [Arabidopsis thaliana]
 gi|170678778|gb|ACB31449.1| PHV, partial [Arabidopsis thaliana]
 gi|170678780|gb|ACB31450.1| PHV, partial [Arabidopsis thaliana]
 gi|170678782|gb|ACB31451.1| PHV, partial [Arabidopsis thaliana]
 gi|170678784|gb|ACB31452.1| PHV, partial [Arabidopsis thaliana]
 gi|170678786|gb|ACB31453.1| PHV, partial [Arabidopsis thaliana]
 gi|170678788|gb|ACB31454.1| PHV, partial [Arabidopsis thaliana]
 gi|170678790|gb|ACB31455.1| PHV, partial [Arabidopsis thaliana]
 gi|170678792|gb|ACB31456.1| PHV, partial [Arabidopsis thaliana]
 gi|170678794|gb|ACB31457.1| PHV, partial [Arabidopsis thaliana]
 gi|170678796|gb|ACB31458.1| PHV, partial [Arabidopsis thaliana]
 gi|170678798|gb|ACB31459.1| PHV, partial [Arabidopsis thaliana]
 gi|170678800|gb|ACB31460.1| PHV, partial [Arabidopsis thaliana]
 gi|170678802|gb|ACB31461.1| PHV, partial [Arabidopsis thaliana]
 gi|170678804|gb|ACB31462.1| PHV, partial [Arabidopsis thaliana]
 gi|170678806|gb|ACB31463.1| PHV, partial [Arabidopsis thaliana]
 gi|170678808|gb|ACB31464.1| PHV, partial [Arabidopsis thaliana]
 gi|170678810|gb|ACB31465.1| PHV, partial [Arabidopsis thaliana]
 gi|170678812|gb|ACB31466.1| PHV, partial [Arabidopsis thaliana]
 gi|170678814|gb|ACB31467.1| PHV, partial [Arabidopsis thaliana]
 gi|170678816|gb|ACB31468.1| PHV, partial [Arabidopsis thaliana]
          Length = 73

 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 57/71 (80%), Positives = 63/71 (88%)

Query: 154 SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLV 213
           +PA LLSIAEETL EFL KATGTAV+WVQM GMKPGPDS+GIVA+S  CSG+AARACGLV
Sbjct: 3   NPANLLSIAEETLAEFLCKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLV 62

Query: 214 GLEPTRVAEIL 224
            LEP +VAEIL
Sbjct: 63  SLEPMKVAEIL 73


>gi|225444363|ref|XP_002266688.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR 2
           [Vitis vinifera]
 gi|302144076|emb|CBI23181.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 165/749 (22%), Positives = 275/749 (36%), Gaps = 195/749 (26%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 60  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 115

Query: 75  -QRKEASRLQAVNRK-----------------------------------LTAMNKLLME 98
            +R E S L+A N K                                   L   N  L +
Sbjct: 116 HERHENSNLRAENEKLRAENIRYKEALSNATCPHCGGPASIGEMSFDEQHLRIENARLRD 175

Query: 99  ENDRLQ----KQVSQLVYENGYFRQHTQSTTL--ATKDTSCESVVTS----GQHHLTPQH 148
           E DR+     K V + +    +   HT S +L     +   +S +      G   L    
Sbjct: 176 EIDRISGIAAKYVGKPMVSYPHLSTHTSSRSLDLGVGNFGAQSGIVGDMYGGGDLLRSVS 235

Query: 149 PPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPG-----------MKPGPDSVGIVA 197
            P +A    ++ +A   + E +  A      W+               ++  P  +G   
Sbjct: 236 LPTEADKPMIVELAVAAMEELIRMAQAGEPLWIPTSDNSTEILSEDEYLRTFPRGIGPKP 295

Query: 198 ISHGCSGVAARACGLVGLEPTRVAEILKDRPRGSAILYALTT------------------ 239
           +  G    A+R   +V +    + EIL D  + S++   + +                  
Sbjct: 296 L--GLKSEASRETAVVIMNHISLVEILMDVNQWSSVFSGIVSRAMTLEVLSTGVAGNYNG 353

Query: 240 --------------LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRA 285
                         L P R+ + +RY     DG+  V + SL N+++GP         R 
Sbjct: 354 ALQVMTAEFQVPSPLVPTRENYFVRYCKHHPDGTWAVVDVSLDNLRSGP-------ITRN 406

Query: 286 EMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLR 344
              PSG LI+    G S +  V+H++++  +V  + RPL  S      K  +A L RQ  
Sbjct: 407 RRRPSGCLIQELPNGYSKVIWVEHVEVDDRAVHNIYRPLVNSGLAFGAKRWVATLDRQCE 466

Query: 345 QMAQEVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM 396
           ++A  +  +   G         GR+  ++  L++R+   F   V   T   WT +   G 
Sbjct: 467 RLASAMASNIPAGDVGVITSPEGRK--SMLKLAERMVMSFCAGVGASTTHTWTTLSGSGA 524

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR--EHRS 454
           DDV V+   S D             P     ++ + A+     VPP  +  FLR    RS
Sbjct: 525 DDVRVMTRKSMDD------------PGRPPGIVLSAATSFWIPVPPKRVFDFLRAENSRS 572

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EW     D+ S   +                   +  +AH     +    + L  V  + 
Sbjct: 573 EW-----DILSNGGL-------------------VQEMAHIANGRDPGNCVSLLRVNSAN 608

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRI 565
                  +M +LQ     +     T + +I+AP+D             D   LLPSGF I
Sbjct: 609 SSQ---SNMLILQ-----ESCTDPTGSYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAI 660

Query: 566 IPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQE 625
           +P  +          L     L++G  G               S++T+AF+   +S    
Sbjct: 661 LPDGA---------VLHGGGILDVGSGG---------------SLLTVAFQILVDSAPTA 696

Query: 626 HVATMARQYVRSIIS-SVQRVALALSPSN 653
            ++  +   V S+I  +V+R+  A+S  N
Sbjct: 697 KLSLGSVATVNSLIKCTVERIKAAVSCEN 725


>gi|397134751|gb|AFO11041.1| HD-1A [Gossypium hirsutum]
          Length = 725

 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 162/751 (21%), Positives = 278/751 (37%), Gaps = 202/751 (26%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K   
Sbjct: 61  YHRHTQRQIQEMEAFFKECPHPDDKQRKELGREL----GLEPLQVKFWFQNKRTQMKAQH 116

Query: 75  QRKEASRLQAVNRKLTAMN----------------------------KLLMEENDRLQKQ 106
           +R E + L+A N KL A N                            +LL  EN RL+++
Sbjct: 117 ERHENAILKAENEKLRAENNRYKEALSNATCPSCGGPAALGEMSFDEQLLRIENARLREE 176

Query: 107 VSQLVYENGYF-------------RQHTQSTTLATKDTSCESVVTSGQHH----LTPQHP 149
           + ++      +               H++S  L   +   +S            L     
Sbjct: 177 IDRISGIAAKYVGKPLSSLPHLSSHLHSRSVDLGASNFGTQSGFVGEMDRSGDLLRSVSG 236

Query: 150 PRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISH--------- 200
           P +A    ++ +A   + E +  A      WV      PG +S+ +++            
Sbjct: 237 PTEADKPMIVELAVAAMEELIRMAQSGEPLWV------PGDNSIDVLSEDEYLRTFPRGI 290

Query: 201 -----GCSGVAARACGLVGLEPTRVAEILKDRPRGSAILYALTT---------------- 239
                G    A+R   +V +    + EIL D  + S++   + +                
Sbjct: 291 GPKPLGLRSEASRESAVVIMNHVNLVEILMDVNQWSSVFCGIVSRAMTLEVLSTGVAGNY 350

Query: 240 ----------------LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
                           L P R+ + +RY     DG+  V + SL N++  P         
Sbjct: 351 NGALQVMTAEFQVPSPLVPTRENYFVRYCKQHIDGTWAVVDVSLDNLRPNP-------MS 403

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQ 342
           +    PSG LI+    G S +  V+H++++  ++  + RP+  S      K  +A L RQ
Sbjct: 404 KCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRAIHNIYRPVVNSGLAFGAKRWVATLDRQ 463

Query: 343 LRQMAQEVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
             ++A  +  +   G         GR+  ++  L++R+   F   V   T   WT +   
Sbjct: 464 CERLASSMASNIPAGDLCVITSLEGRK--SMLKLAERMVTSFCTGVGASTAHAWTSLSAT 521

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH-- 452
           G DDV V+   S D             P     ++ + A+     VPP  +  FLR+   
Sbjct: 522 GSDDVRVMTRKSMDD------------PGRPPGIVLSAATSFWIPVPPKRVFDFLRDENS 569

Query: 453 RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGH 512
           RSEW     D+ S   +                   +  +AH     +    + L  V  
Sbjct: 570 RSEW-----DILSNGGL-------------------VQEMAHIANGRDPGNCVSLLRVNS 605

Query: 513 SPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGF 563
           +        +M +LQ     +     T + +I+AP+D             D   LLPSGF
Sbjct: 606 ANSSQ---SNMLILQ-----ESCTDATGSYVIYAPVDIVAMNVVLSGGDPDYLALLPSGF 657

Query: 564 RIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHM 623
            I+P   G         ++    LEIG  G               S++T+AF+   +S  
Sbjct: 658 AILPDGPG---------VNGGGILEIGSGG---------------SLLTVAFQILVDSVP 693

Query: 624 QEHVATMARQYVRSIIS-SVQRVALALSPSN 653
              ++  +   V S+I  +V+R+  A+  +N
Sbjct: 694 TAKLSLGSVTTVNSLIKCTVERIKAAVMCNN 724


>gi|194696754|gb|ACF82461.1| unknown [Zea mays]
          Length = 83

 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 52/62 (83%), Positives = 56/62 (90%)

Query: 9  KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
          K   +D+GKYVRYTPEQVE LERLY +CPKPSS RRQQL+RECPILSNIEPKQIKVWFQN
Sbjct: 22 KVPGMDSGKYVRYTPEQVEVLERLYIDCPKPSSSRRQQLLRECPILSNIEPKQIKVWFQN 81

Query: 69 RR 70
          RR
Sbjct: 82 RR 83


>gi|326525997|dbj|BAJ93175.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 777

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 164/741 (22%), Positives = 281/741 (37%), Gaps = 199/741 (26%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 118 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 173

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 105
            +R E S+L+A N KL A N    E                            EN RL+ 
Sbjct: 174 HERHENSQLRADNDKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRVENARLRD 233

Query: 106 QVSQLVYENGYFRQHTQ------STTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLL 159
           ++ ++      +           S+ LA    +    V +G   +  Q PP D     ++
Sbjct: 234 EIDRISAIAAKYVGKPMVPFPVLSSPLAAAPGASAYDVFAGAASVL-QAPPDDKQQGVVV 292

Query: 160 SIAEETLTEFLSKAT------GTAV---------EWVQM---PGMKPGPDSVGIVAISHG 201
            +A   + E L  A        T V         E+ +M   P    GP   G+V     
Sbjct: 293 ELAVAAMEELLRMARLDDPLWATTVDQTLALDEEEYARMFIDPRGGLGPKQYGLVP---- 348

Query: 202 CSGVAARACGLVGLEPTRVAEILKDRPRGSAILYALTT---------------------- 239
               A+R   +V + P  + EIL D  + +A+  ++ +                      
Sbjct: 349 ---EASRDATVVIMTPASLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGCYDGALQV 405

Query: 240 ----------LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLP 289
                     L P R+ + +RY     DG+  V + SL  +Q           V+    P
Sbjct: 406 MSVEFQVPSPLVPTRESYFVRYCKRNADGAWAVVDVSLDGLQG----------VKCRRRP 455

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLR 344
           SG LI+    G S +  V+H++++  SV  + +PL  S      +  +  L     R   
Sbjct: 456 SGCLIQEAPNGYSKVTWVEHVEVDDRSVHNIYKPLVGSGLAFGARRWVGVLGRQCERLAS 515

Query: 345 QMAQEVTQSSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVT 400
            MA  +  S +    +  GR+  ++  L++R+   F   V       WT +   G +DV 
Sbjct: 516 AMASNIPTSDIGVITSSEGRK--SMLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDVR 573

Query: 401 VLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWAD 458
           V+   S D             P     ++   A+     VPP  +  FLR+   RSEW  
Sbjct: 574 VMTRKSVDD------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDETSRSEW-- 619

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
              D+ S   I                 Q +  +A+  +H   + ++++     +  + +
Sbjct: 620 ---DILSNGGI----------------VQEMAHIANGRDHGNCVSLLRVNSTNSNQSNML 660

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLD 569
           +     L + C+    +A G+   +I+AP+D             D   LLPSGF I+P  
Sbjct: 661 I-----LQESCT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP-- 707

Query: 570 SGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVAT 629
                               GPAG    +  +  +    S++T+AF+   +S     ++ 
Sbjct: 708 -------------------DGPAGT--MHAAAGATGTGGSLLTVAFQILVDSVPTAKLSL 746

Query: 630 MARQYVRSIIS-SVQRVALAL 649
            +   V S+I+ +V+R+  A+
Sbjct: 747 GSVATVNSLIACTVERIKTAV 767


>gi|397134753|gb|AFO11042.1| HD-1D [Gossypium hirsutum]
          Length = 725

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 165/753 (21%), Positives = 277/753 (36%), Gaps = 204/753 (27%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 60  RYHRHTQRQIQEMEAFFKECPHPDDKQRKELGREL----GLEPLQVKFWFQNKRTQMKAQ 115

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 105
            +R E + L+A N KL A N    E                            EN RL++
Sbjct: 116 HERHENAILKAENEKLRAENNRYKEALSNATCPSCGGPAALGEMSFDEQHLRIENARLRE 175

Query: 106 QVSQLVYENGYF-------------RQHTQSTTLATKDTSCESVVTSGQHH----LTPQH 148
           ++ ++      +               H++S  L   +   +S            L    
Sbjct: 176 EIDRISGIAAKYVGKPLSSLPHLSSHLHSRSADLGASNFGNQSGFVGEMDRSGDLLRSVS 235

Query: 149 PPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSV--------------G 194
            P +A    ++ +A   + E +  A      WV      PG +S               G
Sbjct: 236 GPTEADKPMIVELAVAAMEELIRMAQSGEPLWV------PGDNSTDVLNEDEYLRTFPRG 289

Query: 195 IVAISHGCSGVAARACGLVGLEPTRVAEILKDRPRGSAILYALTT--------------- 239
           I     G    A+R   +V +    + EIL D  + S++   + +               
Sbjct: 290 IGPKPLGLRSEASRESAVVIMNHVNLVEILMDVNQWSSVFCGIVSRAMTLEVLSTGVAGK 349

Query: 240 -----------------LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHF 282
                            L P R+ +  RY     DG+  V + SL N++  P        
Sbjct: 350 CNGALQVMTAEFQVPSPLVPTRENYFARYCKQHIDGTWAVVDVSLDNLRPNP-------M 402

Query: 283 VRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-R 341
            +    PSG LI+    G S +  V+H++++  +V  + RP+  S      K  +A L R
Sbjct: 403 SKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRAVHNIYRPVVNSGLAFGAKRWVATLDR 462

Query: 342 QLRQMAQEVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGN 393
           Q  ++A  +  +   G         GR+  ++  L++R+   F   V   T   WT +  
Sbjct: 463 QCERLASSMASNIPAGDLCVITSPEGRK--SMLKLAERMVTSFCTGVGASTAHAWTTLSA 520

Query: 394 DGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH- 452
            G DDV V+   S D             P     ++ + A+     VPP  +  FLR+  
Sbjct: 521 TGSDDVRVMTRKSMDD------------PGRPPGIVLSAATSFWIQVPPKRVFDFLRDEN 568

Query: 453 -RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVG 511
            RSEW     D+ S   +                   +  +AH     +    + L  V 
Sbjct: 569 SRSEW-----DILSNGGL-------------------VQEMAHIANGRDPGNCVSLLRVN 604

Query: 512 HSPEDAIMPRDMFLLQ-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPS 561
            +        +M +LQ  C+    +A G+   +I+AP++             D   LLPS
Sbjct: 605 SANSSQ---SNMLILQESCT----DAKGSY--VIYAPVNIVAMNIVLSGGDPDYVALLPS 655

Query: 562 GFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFES 621
           GF I+P   G         ++    LEIG  G               S++T+AF+   +S
Sbjct: 656 GFAILPDGPG---------VNGGGILEIGSGG---------------SLLTVAFQILVDS 691

Query: 622 HMQEHVATMARQYVRSIIS-SVQRVALALSPSN 653
                ++  +   V S+I  +V+R+  A+  +N
Sbjct: 692 VPTAKLSLGSVATVNSLIKCTVERIKAAVKCNN 724


>gi|45593105|gb|AAS68141.1| homeodomain leucine zipper protein 29 [Oryza sativa Japonica Group]
          Length = 93

 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 55/94 (58%), Positives = 72/94 (76%), Gaps = 1/94 (1%)

Query: 435 MLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAH 494
           MLLQ+V P  LL+FLREHRS+WAD+N+D + A+ +K   C+LP SR+G F  QVILPLAH
Sbjct: 1   MLLQDVSPPSLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSRLGGFSGQVILPLAH 60

Query: 495 TIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
           T E EEF+EVIKL G   + +D ++ RD+FLLQ+
Sbjct: 61  TFEPEEFLEVIKL-GNASNYQDTLVHRDLFLLQM 93


>gi|19070143|gb|AAL83725.1|AF328842_1 homeodomain protein HB2 [Picea abies]
          Length = 708

 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 171/745 (22%), Positives = 285/745 (38%), Gaps = 182/745 (24%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 75
           +Y R+TP+Q++ LE L+ ECP P   +R  + +      N+E +Q+K+WFQNRR + K  
Sbjct: 29  RYHRHTPQQIQELEALFKECPHPDEKQRLDISKRL----NLETRQVKLWFQNRRTQMKTQ 84

Query: 76  ---------RKEASRLQAVN---------------------RKLTAMNKLLMEENDRLQK 105
                    R+E  +L++ N                      +++   + L  EN RL+K
Sbjct: 85  LERHENSILRQENEKLRSENLSIRDAMRNPICTNCGGPAVLGEMSFEEQQLRIENARLKK 144

Query: 106 QVSQLVYENGYF--RQHTQSTTLATKDTSCESVVTSGQHHLTPQ------HPPRDASPAG 157
           ++ +L    G F  R      ++     S   +   G     P       H P       
Sbjct: 145 ELDRLCALAGKFFGRPVPSMPSVPLMPKSSLDLGVGGMPTSLPSGCADLMHGPAGGRTGN 204

Query: 158 LLSIAEETLTEFLSKAT------GTAVEWVQMPGMKPGPDSVG-----------IVAISH 200
           ++ I    L E    +         A E + +P +  G +++            I     
Sbjct: 205 IIGIERSMLAELALASMDELFKMAQADETLWIPNLDAGKETLNYEEYMRQFPSTITPKLI 264

Query: 201 GCSGVAARACGLVGLEPTRVAEILKDRPR----------------------------GSA 232
           G +  A R  G+V      + E L D  R                               
Sbjct: 265 GLATEATRETGMVITNSLNLVETLMDVDRWKEMFPCMISRAAMVDVISSGMSGTRNGALQ 324

Query: 233 ILYA----LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ-NGPTMPPVQHFVRAEM 287
           ++YA    L+ L PAR+ + LR+     +G   V + S+ +++ N P       F++   
Sbjct: 325 LMYAELQVLSPLVPAREVYFLRFCKQHAEGVWAVVDVSVDSLRDNSPA-----GFMKCRR 379

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQM 346
           LPSG LI+    G S +  V+H + +   V  + R L  S      +  +A L RQ   +
Sbjct: 380 LPSGCLIQDMPNGYSKVTWVEHAEYDDRGVHRLYRSLLNSGMAFGAQRWLATLQRQCECL 439

Query: 347 AQEVTQSSVNGWGRRPAALRA---------LSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
           A  +  ++ N   R P A+R          L+QR++  F   V+  T   W  +  +  D
Sbjct: 440 A--ILMATANVTARDPTAIRTPNGRRSMLRLAQRMTDNFCAGVSASTVHTWNKLSGNIDD 497

Query: 398 DVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSE 455
           DV V+   S D             P     V+ + A+ +   V P  L  FLR+   RSE
Sbjct: 498 DVRVMTRKSVDD------------PGEPPGVVLSAATSVWLPVSPQRLFDFLRDERLRSE 545

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           W     D+ S      GP               +  +AH  + ++    + L  +  S  
Sbjct: 546 W-----DILSNG----GP---------------MQEMAHIPKGQDPGNCVSL--LKASAM 579

Query: 516 DAIMPRDMFLLQ-LCSGMDENAVGTCAELIFAPID------ASFADDAP---LLPSGFRI 565
           ++     M +LQ  C+    NA G+   +++AP+D           D P   LLPSGF I
Sbjct: 580 NSNQSSSMLILQKTCT----NASGSL--VVYAPVDIPAMHVVMSGGDPPYVALLPSGFAI 633

Query: 566 IPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQE 625
           +P       + P         L + P+GN    N   +     S++T+AF+    S    
Sbjct: 634 LP-------NGPK-----CRPLALNPSGNGVGVN---SPRVGGSLLTVAFQILVNSLPTA 678

Query: 626 HVATMARQYVRSIIS-SVQRVALAL 649
            +   + + V ++IS +VQ++  AL
Sbjct: 679 KLTVESVETVNNLISCTVQKIKAAL 703


>gi|148283421|gb|ABQ57291.1| hox29, partial [Oryza sativa Indica Group]
          Length = 102

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 58/68 (85%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           LYA TTLA ARDFWLLRYTS+L+DGSLVVCERSL + Q GP+MP VQ F+R EMLPSG+L
Sbjct: 35  LYAPTTLALARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEMLPSGFL 94

Query: 294 IRPCEGGG 301
           IRP + GG
Sbjct: 95  IRPSDVGG 102


>gi|148283383|gb|ABQ57272.1| hox10, partial [Oryza sativa Indica Group]
          Length = 80

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/80 (56%), Positives = 64/80 (80%)

Query: 735 TLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKV 794
           +LVALQD+TL++IFD+ G++ALF+  P++M+QG   L  G+C+S MGR VS+++AVAWKV
Sbjct: 1   SLVALQDLTLDRIFDEPGKEALFSNIPKLMEQGHVYLPSGVCMSGMGRHVSFDQAVAWKV 60

Query: 795 LNEEETAHCICFMFINWSFV 814
           L E+   HC+ F F+NWSFV
Sbjct: 61  LAEDSNVHCLAFCFVNWSFV 80


>gi|1173622|gb|AAB37230.1| homeobox protein [Phalaenopsis sp. SM9108]
          Length = 768

 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 148/664 (22%), Positives = 240/664 (36%), Gaps = 169/664 (25%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R+ L +E      +EP Q+K WFQN+R + K  
Sbjct: 92  RYHRHTQHQIQEMEAFFKECPHPDDKQRKALSKEL----GLEPLQVKFWFQNKRTQMKTQ 147

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME----------------------------ENDRLQK 105
             R+E S+L+A N KL   N    E                            EN RL++
Sbjct: 148 HDRQENSQLRAENDKLRNENLRYKEALSNASCPNCGGPATLGEMSFDEHHLRIENARLRE 207

Query: 106 QVSQLV-YENGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDA---SPAGLL-- 159
           ++ ++      Y  +   S  L +      S +  G        P       SPA LL  
Sbjct: 208 EIDRISGIAAKYVGKPMNSYPLLSPTLPSRSSLDLGVGGFGLHSPTMGGDMFSPAELLRS 267

Query: 160 -------------SIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSV-----------GI 195
                         +A   + E +  A      W   PG+  G + +           GI
Sbjct: 268 VAGQPEVDKPMVIELAVAAMEELIRMAQLGEPLWTSSPGLDGGNEILNEEEYVQNFPRGI 327

Query: 196 VAISHGCSGVAARACGLVGLEPTRVAEILKDRPRGSAILYALTT---------------- 239
                G    A+R   +V +    + EIL D  + S +   + +                
Sbjct: 328 GPKPFGLKSEASRETAVVIMSHVNLVEILMDANQWSTMFSGIVSRGMTLEVLSTGVAGNY 387

Query: 240 ----------------LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
                           L P R+ + +RY     DG+  V + SL +++      P    +
Sbjct: 388 NGALQVMTAEFQVPSPLVPTRESYFVRYCKQHPDGTWAVVDVSLDSLR------PSSLMM 441

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQ 342
           R    PSG LI+    G S +  V+H +++  SV  + +PL  S      K  ++ L RQ
Sbjct: 442 RCRRRPSGCLIQEMPNGYSKVIWVEHFEVDDRSVHSIYKPLVNSGIAFGAKRWVSTLDRQ 501

Query: 343 LRQMAQEVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
             ++A  +  S  +G         GR+  ++  L++R+   F   V+  T   WT +   
Sbjct: 502 CERLASVMASSIPSGEIGVITTSEGRK--SMLKLAERMVLSFCGGVSASTTHQWTTLSGS 559

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH-- 452
           G +DV V+   S D             P     ++   A+     V P  +  FLR+   
Sbjct: 560 GAEDVRVMTRKSVDD------------PGRPPGIVLNAATSFWLPVSPKRVFDFLRDESS 607

Query: 453 RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGH 512
           RSEW     D+ S                      V+  +AH     +    + L  V  
Sbjct: 608 RSEW-----DILSNGG-------------------VVQEMAHIANGRDHGNCVSLLRVNS 643

Query: 513 SPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGF 563
           +  +     +M +LQ     +     T + +I+AP+D             D   LLPSGF
Sbjct: 644 TNSNQ---SNMLILQ-----ESCTDPTGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGF 695

Query: 564 RIIP 567
            I+P
Sbjct: 696 AILP 699


>gi|449434374|ref|XP_004134971.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 721

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 162/751 (21%), Positives = 269/751 (35%), Gaps = 196/751 (26%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R +L RE      +EP Q+K WFQN+R + K  
Sbjct: 52  RYNRHTQHQIQEMEAFFKECPHPDDKQRMELSREL----GLEPLQVKFWFQNKRTQMKAQ 107

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME-----------------------------ENDRLQ 104
            +R E + L+A N KL A N    E                             EN RL+
Sbjct: 108 HERHENAILKAENEKLRAENIRYREAFAHSTCPNCGSSSTALGEMSFDDQHLRIENSRLR 167

Query: 105 KQVSQLVYENGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHP--------------- 149
            ++ ++   +GY  + T+       +    S+   G  +  PQ                 
Sbjct: 168 DEIERM---SGYGSKCTKPYYQLPTNAPTRSL-DLGITNFGPQSSGFVGEMYGAADFFRS 223

Query: 150 ---PRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSV-----------GI 195
              P +     ++ +A   + E    A G    WV   G   G   +           GI
Sbjct: 224 ISRPSEGEKPVIVELAVSGMEELRRMAQGGEPLWVAGDGKSSGEVVLNEAEYLRSFGGGI 283

Query: 196 VAISHGCSGVAARACGLVGLEPTRVAEILKDRPRGSAILYALTT---------------- 239
           V    G    A+R   +V +   ++ +I  D  + S +   + +                
Sbjct: 284 VGKPMGFRTEASRVSAVVFMNHMKLVDIFMDATQWSTVFCGIVSRASTVEILSPGLPGNF 343

Query: 240 ----------------LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
                           L P R+ + +RY     DGS  V + SL  ++  P +P  +   
Sbjct: 344 NGALHVMSAEFQVPSPLVPTRENYFVRYCKQQTDGSWAVADVSLDTLRPSP-IPNTRR-- 400

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQ 342
                PSG LI+    G S I  V+H++++   VP + R L  S      K  +A L RQ
Sbjct: 401 ----KPSGCLIQELPNGYSKITWVEHVEVDETGVPTMYRTLVNSGLAFGAKRWVATLDRQ 456

Query: 343 LRQMAQEVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
             + A  +  +   G         GR+  ++  L++R+   F   V   +   WT +   
Sbjct: 457 SERFATSIATTIPTGDLRVISSIEGRK--SMLKLAERMVTSFCAGVGASSVHAWTALPAA 514

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH-- 452
             D+V V+   S D+            P     V+ + A+     V P ++  FLR+   
Sbjct: 515 AGDEVRVVTRKSTDE------------PGRPPGVVLSAATSFWIPVSPKVVFDFLRKEKS 562

Query: 453 RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGH 512
           RSEW     D+ S   +                   +  +AH          + L  V  
Sbjct: 563 RSEW-----DILSNGGL-------------------VQEMAHIANGRHSGNCVSLLRVNS 598

Query: 513 SPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGF 563
           +        +M +LQ     +     T + +I+AP+D             D   LLPSGF
Sbjct: 599 ANSSQ---SNMLILQ-----ESCTDSTGSYVIYAPVDTVAMNVVLSGCDPDYVALLPSGF 650

Query: 564 RIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHM 623
            I+P              +    LE+G  G               S++T+AF+   +S  
Sbjct: 651 AILP------DGPGGGGNNGGGILELGSGG---------------SLITVAFQILVDSVP 689

Query: 624 QEHVATMARQYVRSIIS-SVQRVALALSPSN 653
              ++  +   V S+I  +V+R+  A+   N
Sbjct: 690 TARLSIGSVATVNSLIKCTVERIRAAVMREN 720


>gi|413917976|gb|AFW57908.1| hypothetical protein ZEAMMB73_425798 [Zea mays]
          Length = 672

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/58 (82%), Positives = 52/58 (89%)

Query: 170 LSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR 227
           +SKATGTAV WVQM GM+PGPDSVGIVA+SH CS VAARACGLV LEPT+VAEI KDR
Sbjct: 1   MSKATGTAVNWVQMVGMEPGPDSVGIVAVSHNCSVVAARACGLVSLEPTKVAEIHKDR 58


>gi|46242614|gb|AAS83424.1| Hox9, partial [Oryza sativa Japonica Group]
 gi|148283381|gb|ABQ57271.1| hox9, partial [Oryza sativa Indica Group]
          Length = 66

 Score = 99.8 bits (247), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/66 (60%), Positives = 52/66 (78%)

Query: 749 DDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMF 808
           D+ GRKAL+ E P++M+QG+  L GG+CLS MGR VS+E+AVAWKVL E+   HC+ F F
Sbjct: 1   DEAGRKALYNEIPKLMEQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCF 60

Query: 809 INWSFV 814
           +NWSFV
Sbjct: 61  VNWSFV 66


>gi|359485664|ref|XP_002273837.2| PREDICTED: homeobox-leucine zipper protein HDG2 [Vitis vinifera]
          Length = 762

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 159/759 (20%), Positives = 268/759 (35%), Gaps = 218/759 (28%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF---------Q 67
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WF         Q
Sbjct: 99  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 154

Query: 68  NRRCREKQ-RKEASRLQAVNRKL---------------TAMNKLLMEENDRLQKQVSQLV 111
           + R    Q R E  +L+  N +                TA+ ++  +E+         L 
Sbjct: 155 HERHENTQLRSENEKLRTENLRYREALSNASCPNCGGPTAIGEMSFDEH--------HLR 206

Query: 112 YENGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHP---------------------- 149
            EN   R+     +        + VV    + L PQ P                      
Sbjct: 207 LENARLREEIDRISAIAAKYVGKPVVN---YPLIPQVPTRPLDLGVGNFGAQPGLGGELF 263

Query: 150 -----------PRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPGMK 187
                      P +A    ++ +A   + E    A            GT  E  +   ++
Sbjct: 264 GASDLLRSINGPTEADKPMIIELAVAAMEELFRMAQMGEPLWLPSLDGTTTELSEDEYIR 323

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPRGSAILYALTT-------- 239
             P  +G       C   A+R   +V +    + EIL D  + S +   + +        
Sbjct: 324 SFPRGIGPKPPGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVL 381

Query: 240 ------------------------LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPT 275
                                   L P R+ + +RY     DG+  V + SL N++  P 
Sbjct: 382 STGVAGNYNGAFQVMTAEFQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPV 441

Query: 276 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 335
                  VR    PSG LI+    G S +  V+H++++   V  + + L  S      K 
Sbjct: 442 -------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNIYKQLVNSGLAFGAKR 494

Query: 336 TMAAL-RQLRQMAQEVTQSSVNGW--------GRRPAALRALSQRLSRGFNEAVNGFTDE 386
            +A L RQ  ++A  +  +   G         GR+  ++  L++R+   F   V+  T  
Sbjct: 495 WVATLDRQCERLASAMATNIPTGEVGVITSQEGRK--SMLKLAERMVISFCAGVSASTAH 552

Query: 387 GWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILL 446
            WT +   G DDV V+   S D             P     ++ + A+     VPP  + 
Sbjct: 553 TWTTLSGSGADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVF 600

Query: 447 RFLREH--RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEV 504
            FLR+   RSEW     D+ S                      V+  +AH    ++    
Sbjct: 601 DFLRDENSRSEW-----DILSNGG-------------------VVQEMAHIANGQDTGNC 636

Query: 505 IKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADD 555
           + L    +S +      +M +LQ     +     T + +I+AP+D             D 
Sbjct: 637 VSLLRSANSSQS-----NMLILQ-----ESCTDSTASFVIYAPVDVVAMNMVLNGGDPDY 686

Query: 556 APLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAF 615
             LLPSGF I+P  +         T       E+G  G               S++T+AF
Sbjct: 687 VALLPSGFAILPDGT---------TAHGGVIGEVGSGG---------------SLLTVAF 722

Query: 616 EFAFESHMQEHVATMARQYVRSIIS-SVQRVALALSPSN 653
           +   +S     ++  +   V ++I+ +V R+  A+S  N
Sbjct: 723 QILVDSVPTAKLSLGSVATVNNLIACTVDRIKAAVSCEN 761


>gi|297739295|emb|CBI28946.3| unnamed protein product [Vitis vinifera]
          Length = 757

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 159/759 (20%), Positives = 267/759 (35%), Gaps = 216/759 (28%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF---------Q 67
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WF         Q
Sbjct: 92  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 147

Query: 68  NRRCREKQ-RKEASRLQAVNRKL---------------TAMNKLLMEENDRLQKQVSQLV 111
           + R    Q R E  +L+  N +                TA+ ++  +E+         L 
Sbjct: 148 HERHENTQLRSENEKLRTENLRYREALSNASCPNCGGPTAIGEMSFDEH--------HLR 199

Query: 112 YENGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHP---------------------- 149
            EN   R+     +        + VV    + L PQ P                      
Sbjct: 200 LENARLREEIDRISAIAAKYVGKPVV---NYPLIPQVPTRPLDLGVGNFGAQPGLGGELF 256

Query: 150 -----------PRDASPAGLLSIAEETLTEFLSKA-----------TGTAVEWVQMPGMK 187
                      P +A    ++ +A   + E    A            GT  E  +   ++
Sbjct: 257 GASDLLRSINGPTEADKPMIIELAVAAMEELFRMAQMGEPLWLPSLDGTTTELSEDEYIR 316

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPRGSAILYALTT-------- 239
             P  +G       C   A+R   +V +    + EIL D  + S +   + +        
Sbjct: 317 SFPRGIGPKPPGFKCE--ASRETAVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVL 374

Query: 240 ------------------------LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPT 275
                                   L P R+ + +RY     DG+  V + SL N++  P 
Sbjct: 375 STGVAGNYNGAFQVMTAEFQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPV 434

Query: 276 MPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKT 335
                  VR    PSG LI+    G S +  V+H++++   V  + + L  S      K 
Sbjct: 435 -------VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNIYKQLVNSGLAFGAKR 487

Query: 336 TMAAL-RQLRQMAQEVTQSSVNGW--------GRRPAALRALSQRLSRGFNEAVNGFTDE 386
            +A L RQ  ++A  +  +   G         GR+  ++  L++R+   F   V+  T  
Sbjct: 488 WVATLDRQCERLASAMATNIPTGEVGVITSQEGRK--SMLKLAERMVISFCAGVSASTAH 545

Query: 387 GWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILL 446
            WT +   G DDV V+   S D             P     ++ + A+     VPP  + 
Sbjct: 546 TWTTLSGSGADDVRVMTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVF 593

Query: 447 RFLREH--RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEV 504
            FLR+   RSEW     D+ S                      V+  +AH    ++    
Sbjct: 594 DFLRDENSRSEW-----DILSNGG-------------------VVQEMAHIANGQDTGNC 629

Query: 505 IKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADD 555
           + L  V  +        +M +LQ     +     T + +I+AP+D             D 
Sbjct: 630 VSLLRVNSANSSQ---SNMLILQ-----ESCTDSTASFVIYAPVDVVAMNMVLNGGDPDY 681

Query: 556 APLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAF 615
             LLPSGF I+P  +         T       E+G  G               S++T+AF
Sbjct: 682 VALLPSGFAILPDGT---------TAHGGVIGEVGSGG---------------SLLTVAF 717

Query: 616 EFAFESHMQEHVATMARQYVRSIIS-SVQRVALALSPSN 653
           +   +S     ++  +   V ++I+ +V R+  A+S  N
Sbjct: 718 QILVDSVPTAKLSLGSVATVNNLIACTVDRIKAAVSCEN 756


>gi|302787511|ref|XP_002975525.1| hypothetical protein SELMODRAFT_450555 [Selaginella moellendorffii]
 gi|300156526|gb|EFJ23154.1| hypothetical protein SELMODRAFT_450555 [Selaginella moellendorffii]
          Length = 675

 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 174/742 (23%), Positives = 281/742 (37%), Gaps = 197/742 (26%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           ++ R+T  Q++ +E ++ ECP P   +R QL RE      +EP+Q+K WFQNRR + K  
Sbjct: 20  RFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSREL----GLEPRQVKFWFQNRRTQMKVS 75

Query: 75  ----QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS---------------------Q 109
               +  +A + +A N  L A N+ L  EN  +++ +                      Q
Sbjct: 76  IKVFEENQAHQERAENSMLRAENERLRSENIAMREALKNATCPHCGGPATLGEMSYDEQQ 135

Query: 110 LVYENGYFRQHTQ---STTLATK-----DTSCESVVTSGQHHLTPQHPPRDASPA----- 156
           L  EN + +   Q    ++LA K      +S    VT G   L     P   S       
Sbjct: 136 LRIENAHLKDEVQLDRVSSLAAKYLSKPPSSSALAVTPGPSMLELATRPGGLSQVEKPLV 195

Query: 157 ---------GLLSIAEE-----TLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVA-ISHG 201
                     LL++A+       L E  +K +    E++Q      GP  VG+ + ++  
Sbjct: 196 AELAIIAMEELLALAQSREPLWILEENGAKESLNGEEYMQQFSRGLGPTPVGLKSEVTRD 255

Query: 202 CSGVAARACGLVG--------------LEPTRVAEILKDRPRGS------AILYA----L 237
              V      LV               +     +E+L     G+       ++YA    L
Sbjct: 256 TGLVMMNGAALVDTIMDARWMDMFSCIISRALTSEVLSTGVGGNWNNALQLVMYAEFQVL 315

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + LRY     +G   + + S+                      SG+LI+  
Sbjct: 316 SPLVPTREAYFLRYCKQHAEGVWAIVDVSVDG--------------------SGFLIQDM 355

Query: 298 EGGGSIIH---IVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA------ 347
             G S +    I+ HM+ +   V  + R L  S      K  +A L RQ  ++A      
Sbjct: 356 PNGYSKVSQVTILQHMEYDDRQVNNMYRGLVSSGLAFGAKRWLATLQRQCERLAVLLATN 415

Query: 348 ---QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
              +++     N  GRR  ++  L+QR++  F   V+  T   WT +   G DDV V+  
Sbjct: 416 ISPRDLGGVISNATGRR--SMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDVRVMTR 473

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHR------SEWAD 458
            S D             P     ++ + A+ L   V P  +  FLR+ R      S+W  
Sbjct: 474 KSIDN------------PGEPPGIVLSAATSLWMPVSPQRVFEFLRDDRLRSEMNSQW-- 519

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
              D+ S            GS         +  +AH  +  +   VI L  V        
Sbjct: 520 ---DILSNG----------GS---------VQEMAHIAKGHDPGNVISLLRVNALNTSQ- 556

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLD 569
              +M +LQ  S  DE+     + +++AP+D           D A   LLPSGF I+P +
Sbjct: 557 --SNMLILQESS-TDESG----SLIVYAPVDIPAMNLVMQGGDPAYVALLPSGFAILP-E 608

Query: 570 SGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVAT 629
             +   +   T   AS+ E G               C+   +T+AF+    +     +  
Sbjct: 609 GPRSIGTTPETSSRASSGEPG---------------CL---LTVAFQILVSNVPTAKLNL 650

Query: 630 MARQYVRSIIS-SVQRVALALS 650
            +   V S+IS +VQR+  ALS
Sbjct: 651 ESVTTVNSLISCTVQRIKTALS 672


>gi|449466649|ref|XP_004151038.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 777

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 139/654 (21%), Positives = 257/654 (39%), Gaps = 162/654 (24%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           KY R+T EQ+  +E L+ E P P   +RQQL +       + P+Q+K WFQNRR + K  
Sbjct: 111 KYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRL----GLSPRQVKFWFQNRRTQIKAI 166

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME-----------------ENDRLQKQVSQLVYENGY 116
            +R E + L+A   KL   NK + E                 ++D +     QL  +N  
Sbjct: 167 QERHENTLLKAEMEKLREENKAMREISKKKIGCPNCGTADATQDDLVFTTTEQLRIKNAK 226

Query: 117 FRQHTQSTTLAT----KDTSCESVVTSGQHHLTPQHPPRD-------ASPAGLLSIAEET 165
            +   +    A     +  +  S  +SG    T      D          + ++   +E 
Sbjct: 227 LKAEVEKLRAALGKYPQAAASPSTYSSGNEQETSNRICLDFYTGIFGLENSRIMEKVDEA 286

Query: 166 LTEFLSKATGTAVEWVQMPGMKPG------PDSVGIVAISHGCSGV---------AARAC 210
           + E  + A      WV+   ++ G       + +     S+  S           A+R  
Sbjct: 287 VEELKTMAAAGDPLWVR--SVETGREILNYDEYLKTFQFSNNNSNTRNCLKTHIEASRET 344

Query: 211 GLVGLEPTRVAEILKDRPR--------------------GSA---------ILYA----L 237
            LV +EP+R+ +   D  +                    G A         +++A    L
Sbjct: 345 ALVFMEPSRLVQSFMDENQWKEMFPFMISKAATVDVICNGEAAKWNNGAVQLMFAEVQML 404

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ-NGPTMPPVQHFVRAEMLPSGYLIRP 296
           T L P R+ + +R+   L+     + + S++N++ N   +  V++  R    PSG +I+ 
Sbjct: 405 TPLVPTREMYFIRHCKQLDAEQWAIVDVSIENVEDNNIDVSLVKYRKR----PSGCIIKD 460

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEV- 350
              G   + +V+H++     V  + R +  + T    +  MA L     R    MA  + 
Sbjct: 461 ESNGHCKVTMVEHLECVKNKVHNLYRSIVNNGTAFGARHWMATLQLQCERSAFFMATNIP 520

Query: 351 --TQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT-VMGNDGMDDVTVLVN--- 404
               + V+    R + L+ L+QR+S  F++AV   + + WT V+G  G +D+ V      
Sbjct: 521 MKDSTGVSTLAGRKSTLK-LAQRMSCSFSQAVAASSYQTWTKVVGKSG-EDIRVCSRKNL 578

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNID 462
           S P + +G+              +LCA +S+ L  + P +L  F R+   RS+W      
Sbjct: 579 SDPGEPIGV--------------ILCAVSSLWLP-LSPHLLFDFFRDESRRSQWD----- 618

Query: 463 VYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
                                FG      +A+  + ++    + ++ +G    +     +
Sbjct: 619 -------------------AMFGGDKAKTIANLAKGQDRGNSVTIQTIGSKENNN---NN 656

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASF---------ADDAPLLPSGFRIIP 567
           M++LQ     D +   + + ++++ +D +          +    +LPSGF I+P
Sbjct: 657 MWILQ-----DSSTNSSESMVVYSGVDVTSMQSVMSGCDSGSVTILPSGFSILP 705


>gi|356524732|ref|XP_003530982.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 721

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 170/770 (22%), Positives = 284/770 (36%), Gaps = 195/770 (25%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           +DG        +Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK W
Sbjct: 16  QDGSDSQERRKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFW 71

Query: 66  FQNRRCREK---QRKEASRLQAVNRKLTAMNKLLMEE--------------NDRLQKQVS 108
           FQNRR + K   +R +   L+A N K+   N  + E               ND       
Sbjct: 72  FQNRRTQMKAQHERADNCALRADNDKIRCENIAIREALKNVICPSCGAPPLNDDCYFDDQ 131

Query: 109 QLVYENGYFRQ--------------------------HTQSTTLATKDTSCESVVTSGQH 142
           +L  EN + ++                          H  S  L+      + +V     
Sbjct: 132 KLRLENAHLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMASYGNQGMVGPAPS 191

Query: 143 HLT--------------PQHPP--RDASPAGLLSIAEETLTEFLSKATGTAVEWVQ---- 182
            L               P HPP   D   + +  IA   + EFL         W++    
Sbjct: 192 SLNLDLLPAAGTSSSSMPYHPPCLSDMDKSLMSDIASNAMEEFLRLVQTNEPLWLKSNVD 251

Query: 183 ---------------MPGMKPGPDSVGIVAISHGCSGVAARACGLVG----------LEP 217
                           P  +P   +V I A S     V      LV           L P
Sbjct: 252 ARDVLSCDAYERMFHKPNTRPKNPNVRIEA-SRDSGVVLMNTLALVDMFMDPNKWIQLFP 310

Query: 218 T-----RVAEILKDRPRGSA-----ILY----ALTTLAPARDFWLLRYTSVLEDGSLVVC 263
           T     R  +++     GS      ++Y     L+ L   R+F+ LRY   +E G+  V 
Sbjct: 311 TIVSVARTIQVISSGMMGSCSGSLQLMYQELQVLSPLVSTREFYFLRYCQQIEQGTWAVM 370

Query: 264 ERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-R 322
           + S    Q+    P      R+   PSG LI+    G S I  V+H+++E  ++P  L R
Sbjct: 371 DVSYDFPQDSHYAPQ----FRSHRCPSGCLIQDMPDGHSKITWVEHVEIEDKTLPHRLYR 426

Query: 323 PLYESSTVLAQKTTMAALRQLRQ------MAQEVTQSSVNGWGRRPAALRA---LSQRLS 373
            L  S      +  +  L+++ +           T+ ++ G    P   R+   L+QR+ 
Sbjct: 427 NLIYSGMAFGAERWLTTLQRMCERLTYLMATSNPTRDNLGGVISSPEGKRSMMKLAQRMV 486

Query: 374 RGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKA 433
             F   ++  +   WT +       V V V+ S D             P   N V+ + A
Sbjct: 487 TNFCANISTSSGHRWTTLSGLNEIVVRVTVHKSSD-------------PGQPNGVVLSAA 533

Query: 434 SMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILP 491
           + +    PP  +  F ++   R +W     DV S            G+ V     Q +  
Sbjct: 534 TTIWLPTPPHAVFNFFKDENKRPQW-----DVLSN-----------GNAV-----QEVAN 572

Query: 492 LAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAE-LIFAPID- 549
           +A+ +     + V++     +S +      +M +LQ      E+ + +    +++ P+D 
Sbjct: 573 IANGLHPGNSISVLR--AFNNSTQ------NMLILQ------ESCIDSYGSFVVYCPVDL 618

Query: 550 -----ASFADDA---PLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYS 601
                A   +D    PLLP+GF I+P         P++  D  ++     + N A  N  
Sbjct: 619 PSINLAMSGEDPSYIPLLPNGFTILP------DGQPDQEGDDGAST----SSNNANRNIV 668

Query: 602 TNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSII-SSVQRVALALS 650
            +     S++TIAF+    S     +   +   V ++I S+VQ++  +LS
Sbjct: 669 RSGG---SLVTIAFQILVSSLPSAKLNMESVTTVNNLIGSTVQQIKSSLS 715


>gi|109729926|tpg|DAA05777.1| TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens]
          Length = 799

 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 183/440 (41%), Gaps = 88/440 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+ + LRY     +G   V + S+ ++++ P  PP    +R    PSG
Sbjct: 421 AELQVLSPLVPTREIYFLRYCKQHAEGVWAVVDVSVDSLRDNP--PP--SLMRCRRRPSG 476

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQ-- 348
            LI+    G + +  V+HM+ +  +V  + R L  +      +  +A L RQ  ++A   
Sbjct: 477 VLIQDTPNGYAKVTCVEHMEYDDRAVHRMYRELVNTGMAFGAQRWLATLQRQCERLASLL 536

Query: 349 --EVTQSSVNGW----GRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
              +    + G     GRR  ++  L+QR++  F   V+  T   WT +   G DDV V+
Sbjct: 537 ASNIASRDLGGVPSASGRR--SMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGDDDVRVM 594

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHR--SEWADNN 460
              S D             P   + ++ + A+ +   V PA + +FLR+ R  SEW    
Sbjct: 595 TRKSVDN------------PGEPHGIVLSAATSMWLPVSPARVFQFLRDERLRSEW---- 638

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            D+ S   I                   +  +AH  + ++    + L  V     +    
Sbjct: 639 -DILSNGGI-------------------VTEMAHIAKGQDPGNSVSLLRVNAMNSNQ--- 675

Query: 521 RDMFLLQ-LCSGMDENAVGTCAELIFAPIDA-------SFADDA--PLLPSGFRIIPLDS 570
            +M +LQ  C+ +  + V      I+AP+D           D A   LLPSGF I+P   
Sbjct: 676 SNMLILQESCTDVSGSLV------IYAPVDIPAMNLVLQGGDPAYVALLPSGFAILPDGP 729

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
           G E  S    +D  S L             + +S    S++T+AF+    S     ++  
Sbjct: 730 GGERGS--LGVDQGSQL-------------TESSRGTGSLLTVAFQILVSSIPSARLSLE 774

Query: 631 ARQYVRSIIS-SVQRVALAL 649
           +   V ++IS +VQR+  AL
Sbjct: 775 SVATVNNLISCTVQRIKSAL 794



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP Q++ +E L+ ECP P   +RQQL ++      +EP+Q+K WFQNRR + K  
Sbjct: 116 RYHRHTPRQIQEMEMLFKECPHPDDKQRQQLSKDL----GLEPRQVKFWFQNRRTQMKAQ 171

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E S L+A N K+ + N ++ E
Sbjct: 172 TERAENSMLRAENEKVRSENLIMRE 196


>gi|7267248|emb|CAB81031.1| putative homeotic protein [Arabidopsis thaliana]
          Length = 738

 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 180/437 (41%), Gaps = 99/437 (22%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DGS  V + SL +++  P+ P     +R    PSG LI+    
Sbjct: 368 LVPTRENYFVRYCKQHSDGSWAVVDVSLDSLR--PSTP----ILRTRRRPSGCLIQELPN 421

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNG- 357
           G S +  ++HM+++  SV  + +PL +S      K  +A L RQ  ++A  +  S++ G 
Sbjct: 422 GYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMA-SNIPGD 480

Query: 358 -------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                   GR+  ++  L++R+   F   V   T   WT M   G DDV V+   S D  
Sbjct: 481 LSVITSPEGRK--SMLKLAERMVMSFCSGVGASTAHAWTTMSTTGSDDVRVMTRKSMDD- 537

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     ++ + A+     V P  +  FLR+   R EW     D+ S   
Sbjct: 538 -----------PGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRKEW-----DILSNGG 581

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGV--GHSPEDAIMPRDMFLL 526
           +                   +  +AH     E    + L  V  G+S +      +M +L
Sbjct: 582 M-------------------VQEMAHIANGHEPGNCVSLLRVNSGNSSQS-----NMLIL 617

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSS 576
           Q  C+    +A G+   +I+AP+D             D   LLPSGF I+P  S      
Sbjct: 618 QESCT----DASGSY--VIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGSVG---- 667

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNS--TCMRSVMTIAFEFAFESHMQEHVATMARQY 634
                        G  GN+     ST S  +C  S++T+AF+   +S     ++  +   
Sbjct: 668 -------------GGDGNQHQEMVSTTSSGSCGGSLLTVAFQILVDSVPTAKLSLGSVAT 714

Query: 635 VRSIIS-SVQRVALALS 650
           V S+I  +V+R+  A+S
Sbjct: 715 VNSLIKCTVERIKAAVS 731



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ LE  + ECP P   +R++L R+     N+EP Q+K WFQN+R + K +
Sbjct: 60  RYHRHTQRQIQELESFFKECPHPDDKQRKELSRDL----NLEPLQVKFWFQNKRTQMKAQ 115

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
            E       N+ L + N  L  EN+R ++ +S     N
Sbjct: 116 SERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 149


>gi|18412734|ref|NP_567274.1| homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Arabidopsis
           thaliana]
 gi|75331628|sp|Q93V99.1|PDF2_ARATH RecName: Full=Homeobox-leucine zipper protein PROTODERMAL FACTOR 2;
           AltName: Full=HD-ZIP protein PDF2; AltName:
           Full=Homeodomain transcription factor PDF2
 gi|15983372|gb|AAL11554.1|AF424560_1 AT4g04890/T1J1_3 [Arabidopsis thaliana]
 gi|14276060|dbj|BAB58961.1| protodermal factor2 [Arabidopsis thaliana]
 gi|17064998|gb|AAL32653.1| Unknown protein [Arabidopsis thaliana]
 gi|23197872|gb|AAN15463.1| Unknown protein [Arabidopsis thaliana]
 gi|332657038|gb|AEE82438.1| homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Arabidopsis
           thaliana]
          Length = 743

 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 180/437 (41%), Gaps = 99/437 (22%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DGS  V + SL +++  P+ P     +R    PSG LI+    
Sbjct: 373 LVPTRENYFVRYCKQHSDGSWAVVDVSLDSLR--PSTP----ILRTRRRPSGCLIQELPN 426

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNG- 357
           G S +  ++HM+++  SV  + +PL +S      K  +A L RQ  ++A  +  S++ G 
Sbjct: 427 GYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMA-SNIPGD 485

Query: 358 -------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                   GR+  ++  L++R+   F   V   T   WT M   G DDV V+   S D  
Sbjct: 486 LSVITSPEGRK--SMLKLAERMVMSFCSGVGASTAHAWTTMSTTGSDDVRVMTRKSMDD- 542

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     ++ + A+     V P  +  FLR+   R EW     D+ S   
Sbjct: 543 -----------PGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRKEW-----DILSNGG 586

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGV--GHSPEDAIMPRDMFLL 526
           +                   +  +AH     E    + L  V  G+S +      +M +L
Sbjct: 587 M-------------------VQEMAHIANGHEPGNCVSLLRVNSGNSSQS-----NMLIL 622

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSS 576
           Q  C+    +A G+   +I+AP+D             D   LLPSGF I+P  S      
Sbjct: 623 QESCT----DASGSY--VIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGSVG---- 672

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNS--TCMRSVMTIAFEFAFESHMQEHVATMARQY 634
                        G  GN+     ST S  +C  S++T+AF+   +S     ++  +   
Sbjct: 673 -------------GGDGNQHQEMVSTTSSGSCGGSLLTVAFQILVDSVPTAKLSLGSVAT 719

Query: 635 VRSIIS-SVQRVALALS 650
           V S+I  +V+R+  A+S
Sbjct: 720 VNSLIKCTVERIKAAVS 736



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ LE  + ECP P   +R++L R+     N+EP Q+K WFQN+R + K +
Sbjct: 65  RYHRHTQRQIQELESFFKECPHPDDKQRKELSRDL----NLEPLQVKFWFQNKRTQMKAQ 120

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
            E       N+ L + N  L  EN+R ++ +S     N
Sbjct: 121 SERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 154


>gi|338797897|gb|AEI99592.1| HD-Zip IV transcription factor GL9 [Triticum aestivum]
          Length = 670

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 139/646 (21%), Positives = 234/646 (36%), Gaps = 161/646 (24%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           DG  GS    +  R  P+Q + LE  +  C  P   +R  L       + +  +Q+K WF
Sbjct: 32  DGAEGSQPKRRLQRLNPQQTQVLEGFFSICAHPDENQRMGLSES----TGLSMQQVKFWF 87

Query: 67  QNRRCREKQ---RKEASRLQAVNRKLTAMNKLLMEENDRLQK------------------ 105
           QN+R   K    ++E+ R++       A N++L EEN RL                    
Sbjct: 88  QNKRTYMKHLTGKEESYRMK-------AQNEMLREENKRLASAAKASFCPSCVALPGQNP 140

Query: 106 --QVSQLVYENGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPP---RDASPAGLLS 160
             +V +L  EN   RQ               S + +  H L P       R+     +  
Sbjct: 141 SVEVQRLKEENESLRQQV-------------SQLRAEAHQLDPSTVNIIGRENDIDAIAE 187

Query: 161 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISH-----------GCSGVAARA 209
           + +  + EF+  +      W+ +PG     D +  VA +            G    A RA
Sbjct: 188 LVQNAMHEFVVLSESGGPLWMPVPG--GSLDLLNKVAYAQTFGARSSANAIGFRVEATRA 245

Query: 210 CGLVGLEPTRVAEILKDRP---------------------------RGSAILYALTT--- 239
            G+V +E  ++ + + D                              G+  L    T   
Sbjct: 246 DGMVMMEAKQIVDYIMDSECYTSFCPGTLTSAKTTKIYKWPTNAGYNGAMHLMTAETVFP 305

Query: 240 --LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
             L P+R    +R    +++G++++ + SL N            F +   +PSG LIR  
Sbjct: 306 SPLVPSRKCTFVRCCRGMQNGTVIIVDVSLDNGDG--------TFFKCRKMPSGLLIRSL 357

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQK------TTMAALRQLRQMAQEVT 351
               S + +++H+ +    V E+ RP        A++         A +R L  + Q  +
Sbjct: 358 NSDASQVTVIEHVQVNDAGVHELYRPTLSGLMFGARRWLSSIERQSARMRDLFLLTQSTS 417

Query: 352 QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM-DDVTVLVNSSPDKL 410
            +++NG       L  ++  L  G+   +       WT++   G  DD+ V      D  
Sbjct: 418 AANMNGR----KTLMKIADDLLAGYANGIAAVPGGRWTILRGAGTEDDIRVTYRRKDDD- 472

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR--EHRSEWA--DNNIDVYSA 466
                   +    VS   +CA   + L   P  +    LR  + R +W    N   V   
Sbjct: 473 --------DDTAVVS---VCAAFHLPL---PLRMAFDLLRNIQLRPKWDVLVNGNSVREE 518

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM---PRDM 523
            A+  G        VG F    IL + H  E+ E   ++ L+  G+    A M   P D+
Sbjct: 519 VAVCKG--------VGGFDDVSILHIKHNAENNE--NIMILQNSGYDVSGAFMIYCPVDI 568

Query: 524 FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD 569
            L      M+E         I +P D   ++   L P+GF ++P+D
Sbjct: 569 QL------MNE---------IMSPSDMGESNKVSLYPTGFSLLPVD 599


>gi|109729922|tpg|DAA05775.1| TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens]
          Length = 799

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 182/442 (41%), Gaps = 92/442 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+ + LRY     +G   V + S+ ++++ P  PP    +R    PSG
Sbjct: 421 AELQVLSPLVPTREIYFLRYCKQHAEGVWAVVDVSVDSLRDNP--PP--SLMRCRRRPSG 476

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQ-- 348
            LI+    G + +  V+HM+ +  +V  + R L  +      +  +A L RQ  ++A   
Sbjct: 477 VLIQDTPNGYAKVTCVEHMEYDDRAVHRMYRDLVNTGMAFGAQRWLATLQRQCERLASLL 536

Query: 349 --EVTQSSVNGW----GRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
              +    + G     GRR  ++  L+QR++  F   V+  T   WT +   G DDV V+
Sbjct: 537 ASNIASRDLGGVPSASGRR--SMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGDDDVRVM 594

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHR--SEWADNN 460
              S D             P   + ++ + A+ +   V PA + +FLR+ R  SEW    
Sbjct: 595 TRKSVDN------------PGEPHGIVLSAATSMWLPVSPARVFQFLRDERLRSEW---- 638

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEE---FMEVIKLEGVGHSPEDA 517
            D+ S   +                   +  +AH  + ++    + ++++  +  S  + 
Sbjct: 639 -DILSNGGM-------------------VTEMAHIAKGQDPGNSVSLLRVNAMNSSQSNM 678

Query: 518 IMPRDMFLLQLCSGMDENAVGTCAELIFAPIDA-------SFADDA--PLLPSGFRIIPL 568
           ++     L + C+ +  + V      I+AP+D           D A   LLPSGF I+P 
Sbjct: 679 LI-----LQESCTDVSGSLV------IYAPVDIPAMNLVLQGGDPAYVALLPSGFAILPD 727

Query: 569 DSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVA 628
             G +                G  GN      +       S++T+AF+    S     ++
Sbjct: 728 GPGGDR---------------GALGNEQGGQLTEIGRGTGSLLTVAFQILVSSIPSARLS 772

Query: 629 TMARQYVRSIIS-SVQRVALAL 649
             +   V ++IS +VQR+  AL
Sbjct: 773 LESVATVNNLISCTVQRIRSAL 794



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP Q++ +E L+ ECP P   +RQQL R+      +EP+Q+K WFQNRR + K  
Sbjct: 115 RYHRHTPRQIQEMEMLFKECPHPDDKQRQQLSRDL----GLEPRQVKFWFQNRRTQMKAQ 170

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E S L++ N KL + N ++ E
Sbjct: 171 TERAENSMLRSENEKLRSENLIMRE 195


>gi|218193817|gb|EEC76244.1| hypothetical protein OsI_13678 [Oryza sativa Indica Group]
          Length = 378

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/59 (67%), Positives = 47/59 (79%), Gaps = 1/59 (1%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQ-IKVWFQNRR 70
           +D+GKYV YTP QVEALER+Y ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF  ++
Sbjct: 139 MDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFPKQK 197


>gi|356542838|ref|XP_003539872.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 727

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 180/442 (40%), Gaps = 98/442 (22%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           +A L   T L P R+ + +RY     DG+  V + SL N++ GP+        R    PS
Sbjct: 358 TAELQLPTPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPGPS-------ARCRRRPS 410

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
           G LI+    G S +  V+H++++   V  + + L  S      K  +A L RQ  ++A  
Sbjct: 411 GCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASA 470

Query: 350 VTQSS--------VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
           +  +          N  GR+  ++  L++R+   F   V+  T   WT +   G DDV V
Sbjct: 471 MATNIPTVDVGVITNQDGRK--SMMKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRV 528

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S D             P     ++ + A+     VPP  +  FLR+   R+EW   
Sbjct: 529 MTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRNEW--- 573

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S                      V+  +AH     +    + L  V  +      
Sbjct: 574 --DILSNGG-------------------VVQEMAHIANGRDTGNCVSLLRVNSANSSQ-- 610

Query: 520 PRDMFLLQ-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLD 569
             +M +LQ  C+    N+ G+   +I+AP+D             D   LLPSGF I+P  
Sbjct: 611 -SNMLILQESCT----NSTGSF--VIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP-- 661

Query: 570 SGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVAT 629
               T+S N +  +    E GP+G               S++T+AF+   +S     ++ 
Sbjct: 662 --DGTTSHNGSGGIG---ETGPSG---------------SLLTVAFQILVDSVPTAKLSL 701

Query: 630 MARQYVRSIIS-SVQRVALALS 650
            +   V ++I+ +V+R+  +LS
Sbjct: 702 GSVATVNNLIACTVERIKASLS 723



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 57  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 112

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E + L+  N KL A N
Sbjct: 113 HERHENTNLRTENEKLRADN 132


>gi|40539067|gb|AAR87324.1| expressed protein [Oryza sativa Japonica Group]
          Length = 115

 Score = 83.2 bits (204), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/59 (67%), Positives = 47/59 (79%), Gaps = 1/59 (1%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQ-IKVWFQNRR 70
           +D+GKYV YTP QVEALER+Y ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF  ++
Sbjct: 53  MDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFPKQK 111


>gi|109729924|tpg|DAA05776.1| TPA_inf: class IV HD-Zip protein HDZ42 [Physcomitrella patens]
          Length = 794

 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 182/440 (41%), Gaps = 88/440 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+ + LRY     +G   V + S++++++ P  PP    +R    PSG
Sbjct: 416 AELQVLSPLVPTREIYFLRYCKQHAEGVWAVVDVSVESLRDNP--PP--SLMRCRRRPSG 471

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----M 346
            LI+    G + +  V+HM+ +  +V  + R L  S      +  MA L RQ  +    +
Sbjct: 472 ILIQDTPNGYAKVTCVEHMEYDDRAVHRMYRELVNSGMAFGAQRWMATLQRQCERLASLL 531

Query: 347 AQEVTQSSVNGW----GRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           A  +    + G     GRR  ++  L+QR++  F   V+  T   WT +   G DDV V+
Sbjct: 532 ASNIASRDLGGVPSANGRR--SMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGDDDVRVM 589

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
              S D             P   + ++ + A+ +   V PA + +FLR+   RSEW    
Sbjct: 590 TRKSVDN------------PGEPHGIVLSAATSMWLPVSPARVFQFLRDERLRSEW---- 633

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            D+ S   +                   +  +AH  + ++    + L  V     +    
Sbjct: 634 -DILSNGGM-------------------VTEMAHIAKGQDPGNSVSLLKVNAMNTNN--- 670

Query: 521 RDMFLLQ-LCSGMDENAVGTCAELIFAPIDA-------SFADDA--PLLPSGFRIIPLDS 570
            +M +LQ  C+ +  + V      I+AP+D           D A   LLPSGF I+P   
Sbjct: 671 SNMLILQESCTDVSGSLV------IYAPVDIPAMNLVLQGGDPAYVALLPSGFAILPDGP 724

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
           G               + +G    + T +   +     S++T+AF+    S     ++  
Sbjct: 725 GG-----------GDRVYMGEQPGQLTESGRGSG----SLLTVAFQILVSSVPSARLSLE 769

Query: 631 ARQYVRSIIS-SVQRVALAL 649
           +   V ++IS +VQR+  AL
Sbjct: 770 SVATVNNLISCTVQRIKAAL 789



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP Q++ +E L+ ECP P   +RQQL ++      +EP+Q+K WFQNRR   K  
Sbjct: 108 RYHRHTPRQIQEMEMLFKECPHPDDKQRQQLSKDL----GLEPRQVKFWFQNRRTHMKAQ 163

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E S L+A N KL + N ++ E
Sbjct: 164 TERAENSMLRAENEKLRSENVIMRE 188


>gi|115455597|ref|NP_001051399.1| Os03g0769800 [Oryza sativa Japonica Group]
 gi|50872455|gb|AAT85055.1| putative homeodomain leucine-zipper protein Hox9 [Oryza sativa
           Japonica Group]
 gi|108711284|gb|ABF99079.1| Homeobox domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|113549870|dbj|BAF13313.1| Os03g0769800 [Oryza sativa Japonica Group]
 gi|215712388|dbj|BAG94515.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 242

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/59 (67%), Positives = 47/59 (79%), Gaps = 1/59 (1%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQ-IKVWFQNRR 70
           +D+GKYV YTP QVEALER+Y ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF  ++
Sbjct: 164 MDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFPKQK 222


>gi|108711285|gb|ABF99080.1| Homeobox domain containing protein, expressed [Oryza sativa
           Japonica Group]
          Length = 226

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/59 (67%), Positives = 47/59 (79%), Gaps = 1/59 (1%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQ-IKVWFQNRR 70
           +D+GKYV YTP QVEALER+Y ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF  ++
Sbjct: 164 MDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFPKQK 222


>gi|338797899|gb|AEI99593.1| HD-Zip IV transcription factor GL9H1 [Triticum durum]
          Length = 674

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 128/643 (19%), Positives = 240/643 (37%), Gaps = 148/643 (23%)

Query: 6   KDGKTGSLDNGKYV-RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 64
           +DG  GS    + + R  P+Q + LE  +  C  P   +R  +       + +  +Q+K 
Sbjct: 31  QDGAEGSQQPKRRLQRLNPQQTQVLEGFFGICAHPDENQRMGMSES----TGLTMQQVKF 86

Query: 65  WFQNRRCREKQ---RKEASRLQAVNRKLTAMNKLLM------------------------ 97
           WFQN+R   K    ++E  R++A N  L   NK L                         
Sbjct: 87  WFQNKRTHMKHVTGKEETYRMKAQNEMLREENKRLASAAKTAFCPACVALPGLNPSVEVQ 146

Query: 98  ---EENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDAS 154
              +EN+ L++Q+SQL  E      H  S+     D S E+++             R+  
Sbjct: 147 RLRQENESLKQQLSQLRAE-----AHPSSSRPFQLDPSTENIIG------------REND 189

Query: 155 PAGLLSIAEETLTEFLSKATGTAVEWVQMPG---------MKPGPDSVGIVAISHGCSGV 205
              +  +A+  + EF+  +      W+ +PG                 G  A + G    
Sbjct: 190 MDAIAELAQSAMHEFVVLSESGGPLWMPVPGGSLDVLNKMAYAQTFGAGSSANAIGFMTE 249

Query: 206 AARACGLVGLEPTRVAEILKDRPRGSAILYALTT-------------------------- 239
           A RA G+V ++  ++ + + D    ++    L T                          
Sbjct: 250 ATRADGMVMMDAKQIVDYIMDSECYTSFCPGLVTSANTTKVYKWPTSAGYNGAMHLMTVE 309

Query: 240 ------LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
                 L P+R    +R    +++G++++ + SL N              +   +PSG L
Sbjct: 310 TVFPSPLVPSRKCTFVRCCRDMQNGTVIIVDVSLDNGDG---------TFKCHKMPSGIL 360

Query: 294 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQE--VT 351
           IR      S + +V+H+ +    V E+ RP        A++   + +RQ  +M     V+
Sbjct: 361 IRSLNSDASQVTVVEHVQVNDTGVHELYRPSLSGLMFGARRWVSSIVRQSARMRDLFIVS 420

Query: 352 QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLM 411
           +S+ NG       L  ++  L   +   +      GWT++   G +D             
Sbjct: 421 KSASNGNTNGRKTLMKIADGLLADYASGIAAVPGSGWTILRGAGTED------------- 467

Query: 412 GLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVY---SA 466
            + +++       +NAV+   AS  L  VP  +    L+ +  R +W     DV    ++
Sbjct: 468 DIRITYRKNNDDSNNAVVSVCASFHLP-VPLKVTFDLLKNNLLRPKW-----DVLVNGNS 521

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
              +V  C   G+     G   ++ + H    +  M    L+  G+    A M      +
Sbjct: 522 VREEVAVCKGVGA-----GIDDVVSILHLKNRDNIM---ILQNSGYDVSGAFMVYCPVNI 573

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD 569
           Q+   M+E         I +P + + +++  L P+GF ++P++
Sbjct: 574 QV---MNE---------IMSPSNTAESNNVSLYPTGFHLLPVE 604


>gi|338797895|gb|AEI99591.1| HD-Zip IV transcription factor GL9H2 [Triticum durum]
          Length = 683

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 130/645 (20%), Positives = 241/645 (37%), Gaps = 146/645 (22%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           +DG  GS    +  R TP+Q + LE  +  C  P   +R  +       + +  +Q++ W
Sbjct: 34  QDGAEGSQPKRRLQRLTPQQTQVLEGFFGICAHPDENQRMGMSES----TGLTMQQVRFW 89

Query: 66  FQNRRCREKQ---RKEASRLQAVNRKLTAMNKLLM------------------------- 97
           FQN+R   K    ++E  R++A N  L   NK L                          
Sbjct: 90  FQNKRTHMKHVTGKEETYRMKAQNEMLREENKRLASAAKTSFCPSCVALPGLSPSGEVQR 149

Query: 98  --EENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASP 155
             +EN++L++Q+SQL  E      H  S+     D S E++              R+   
Sbjct: 150 LRQENEQLKQQLSQLRAE-----AHPSSSRPFQLDPSMENITG------------RENDM 192

Query: 156 AGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISH------------GCS 203
             +  +A+  + EF+  A      W+ +PG     D +  +A +             G  
Sbjct: 193 DAIAELAQSAMHEFVVLAEAGGPLWMPVPGGS--FDVLNKMAYAQTFGARSSANVILGFM 250

Query: 204 GVAARACGLVGLEPTRVAEILKDRP---------------------------RGSAILYA 236
             A RA  +V ++  ++ + + D                              G+  L  
Sbjct: 251 TEATRADDMVMMDAKQIVDYIMDSECYTSFCPGLLTSANTTKIYKWPTSAGYNGAMHLVT 310

Query: 237 LTT-----LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           + T     L P+R    +R    +++G++++ + SL N             V+   +PSG
Sbjct: 311 VETVFPSPLVPSRKCTFVRCCRDMQNGTVIIVDVSLDNGDG---------TVKCHKMPSG 361

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQ--E 349
            L+R      S + +++H+ +    + E+ RP        A++   + +RQ  +M     
Sbjct: 362 VLVRSLNSDASQVTVIEHVQVNDTGLHELYRPSLSGLMFGARRWVSSIVRQSARMRDLFV 421

Query: 350 VTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDK 409
           V++S+ NG       L  ++  L  G+   +      GWT++   G +D           
Sbjct: 422 VSKSASNGNTNGRKTLMKIADGLLAGYASGIAAVPGGGWTILRGAGTED----------- 470

Query: 410 LMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVY--- 464
              + +S+       + A++   AS  L  VP  +    L+ +  R +W     DV    
Sbjct: 471 --DIRISYRRNNDDSNTAIVSVCASFHLP-VPHRVTFDLLKNNLLRPKW-----DVLVNG 522

Query: 465 SAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMF 524
           ++   +V  C   G  +    S  IL L      E    ++ L+   +    A M     
Sbjct: 523 NSVREEVAVCKGVGGGIDDVVS--ILHLKDPPTGENRDNIMILQNSSYDVSGAFMVYCPV 580

Query: 525 LLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD 569
            +QL   M+E         I +P D + ++   L P+GF ++P++
Sbjct: 581 NIQL---MNE---------IMSPSDTAESNKVSLYPTGFYLLPVE 613


>gi|361069599|gb|AEW09111.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
          Length = 68

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 53/68 (77%), Gaps = 2/68 (2%)

Query: 562 GFRIIPLDSGKETSS-PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFE 620
           GFR+IPL+S  + S  PNRTLDLASALE+G  G R + +  TNS  +RSV+TIAF+F +E
Sbjct: 1   GFRVIPLESRTDGSGGPNRTLDLASALEVGSTGTRTSGDSGTNSN-LRSVLTIAFQFTYE 59

Query: 621 SHMQEHVA 628
           SH++E+VA
Sbjct: 60  SHLRENVA 67


>gi|222625870|gb|EEE60002.1| hypothetical protein OsJ_12734 [Oryza sativa Japonica Group]
          Length = 201

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/59 (67%), Positives = 47/59 (79%), Gaps = 1/59 (1%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQ-IKVWFQNRR 70
           +D+GKYV YTP QVEALER+Y ECPKP   RRQQL+ E  IL+NIEPKQ IKVWF  ++
Sbjct: 139 MDSGKYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFPKQK 197


>gi|345195186|tpg|DAA34958.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414880175|tpg|DAA57306.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 701

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 115/504 (22%), Positives = 182/504 (36%), Gaps = 124/504 (24%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---R 76
           R T +Q+E LE  +  C  P   +R+QL       + +   Q+K WFQN+R   K    R
Sbjct: 116 RVTSQQLEILEGFFSICAHPDDSQRKQLSES----TGLSVHQVKFWFQNKRTHVKHLSGR 171

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVS------------QLVYENGYFRQHTQST 124
           +E       N +L   N++L EEN+RL +Q              + + + G+     +  
Sbjct: 172 EE-------NYRLKVENEMLKEENNRLIRQAQSNAPAPAPAPCPRCINDAGHLLLEKEVE 224

Query: 125 TLATK-----------DTSCESVVT----SGQHHLTPQHPPRDASPAG-----LLSIAEE 164
            L               T  E+ V     SG  H  P+    +   A      L  +AE 
Sbjct: 225 RLKALNQMLQQELQLQGTEGETPVAVDPASGAFHPDPEPSLENVFAAQHDGQMLAKLAEN 284

Query: 165 TLTEFLSKATGTAVEWVQMPGMK-------------PGPDSVGIVAISHGCSGVAARACG 211
              E L  A   +  W+ +PG               PG  SV  +A+       A RA G
Sbjct: 285 AAQELLVLADPESPLWLPVPGGSFETLNMIAYAQTFPGQMSVDAIALKT----EATRASG 340

Query: 212 LVGLEPTRVAEILKDRPRGSAILYALTT-------------------------------- 239
           +V L+P  + E L D      +   L +                                
Sbjct: 341 VVMLDPKSLVEFLMDAESYGTMFPGLVSGAATDKVYNWPTSREESYDGAVQMMTVELAFP 400

Query: 240 --LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
             L  AR    +R    LE G+  V + SL +              R   +PSG LI+P 
Sbjct: 401 SPLVAARKCTFVRCCKKLEQGAFAVVDVSLDD------------GARCRKMPSGMLIQPI 448

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQ--EVTQSSV 355
                 +  +DH+ ++  S+ ++  P        A++   +  RQ  ++     VT  ++
Sbjct: 449 RYNSCKVSAIDHVRVDDTSIHDIFHPCLSGVLFGARRWVTSMARQCARIRDVFHVTNCTL 508

Query: 356 NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVLVNSSPDKLMGLN 414
           N   R    +  L+  L   +  +V  F D+ WTV    G + D+ ++            
Sbjct: 509 NVTSRGRKTIMKLADNLLADYTSSVAAFPDDAWTVQCGVGTEQDIKIMYKRQ-------- 560

Query: 415 LSFANGFPAVSN-AVLCAKASMLL 437
              + G  + SN AV+CA AS LL
Sbjct: 561 ---SEGSSSSSNTAVVCACASFLL 581


>gi|4325343|gb|AAD17342.1| contains similarity to homeobox domains (Pfam: PF00046, Score,36.5,
           E=6.9e-08, N=1) [Arabidopsis thaliana]
          Length = 772

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 180/455 (39%), Gaps = 116/455 (25%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DGS  V + SL +++  P+ P     +R    PSG LI+    
Sbjct: 383 LVPTRENYFVRYCKQHSDGSWAVVDVSLDSLR--PSTP----ILRTRRRPSGCLIQELPN 436

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQS----- 353
           G S +  ++HM+++  SV  + +PL +S      K  +A L RQ  ++A  +  +     
Sbjct: 437 GYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMASNIPGDL 496

Query: 354 SVNGW---------------------GRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMG 392
           S  G+                     GR+  ++  L++R+   F   V   T   WT M 
Sbjct: 497 SGRGYSDQFKYVGAKLNENVMITSPEGRK--SMLKLAERMVMSFCSGVGASTAHAWTTMS 554

Query: 393 NDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH 452
             G DDV V+   S D             P     ++ + A+     V P  +  FLR+ 
Sbjct: 555 TTGSDDVRVMTRKSMDD------------PGRPPGIVLSAATSFWIPVAPKRVFDFLRDE 602

Query: 453 --RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGV 510
             R EW     D+ S   +                   +  +AH     E    + L  V
Sbjct: 603 NSRKEW-----DILSNGGM-------------------VQEMAHIANGHEPGNCVSLLRV 638

Query: 511 --GHSPEDAIMPRDMFLLQ-LCSGMDENAVGTCAELIFAPID---------ASFADDAPL 558
             G+S +      +M +LQ  C+    +A G+   +I+AP+D             D   L
Sbjct: 639 NSGNSSQS-----NMLILQESCT----DASGSY--VIYAPVDIVAMNVVLSGGDPDYVAL 687

Query: 559 LPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNS--TCMRSVMTIAFE 616
           LPSGF I+P  S                   G  GN+     ST S  +C  S++T+AF+
Sbjct: 688 LPSGFAILPDGSVG-----------------GGDGNQHQEMVSTTSSGSCGGSLLTVAFQ 730

Query: 617 FAFESHMQEHVATMARQYVRSIIS-SVQRVALALS 650
              +S     ++  +   V S+I  +V+R+  A+S
Sbjct: 731 ILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVS 765



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 23/113 (20%)

Query: 17  KYVRYTPEQVEALE---------------RLYHECPKPSSIRRQQLIRECPILSNIEPKQ 61
           +Y R+T  Q++ LE               R + ECP P   +R++L R+     N+EP Q
Sbjct: 60  RYHRHTQRQIQELESLKTFSYILSFLEFYRFFKECPHPDDKQRKELSRDL----NLEPLQ 115

Query: 62  IKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
           +K WFQN+R + K + E       N+ L + N  L  EN+R ++ +S     N
Sbjct: 116 VKFWFQNKRTQMKAQSERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 164


>gi|383131484|gb|AFG46558.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131486|gb|AFG46559.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131488|gb|AFG46560.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131490|gb|AFG46561.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131492|gb|AFG46562.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131494|gb|AFG46563.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
 gi|383131496|gb|AFG46564.1| Pinus taeda anonymous locus CL4011Contig1_03 genomic sequence
          Length = 68

 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 53/68 (77%), Gaps = 2/68 (2%)

Query: 562 GFRIIPLDSGKETSS-PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFE 620
           GFR+IPL+S  + S  PNRTLDLASALE+G  G R + +  T+S  +RSV+TIAF+F +E
Sbjct: 1   GFRVIPLESRTDGSGGPNRTLDLASALEVGSTGTRTSGDSGTSSN-LRSVLTIAFQFTYE 59

Query: 621 SHMQEHVA 628
           SH++E+VA
Sbjct: 60  SHLRENVA 67


>gi|147826488|emb|CAN66212.1| hypothetical protein VITISV_013736 [Vitis vinifera]
          Length = 754

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 165/431 (38%), Gaps = 94/431 (21%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DG+  V + SL N++  P        VR    PSG LI+    
Sbjct: 400 LVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPV-------VRCRRRPSGCLIQEMPN 452

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEVTQSS 354
           G S +  V+H++++   V  + + L  S      K  +A L     R    MA  +    
Sbjct: 453 GYSKVTWVEHVEVDDRGVHNIYKQLVNSGLAFGAKRWVATLDRQCERLASAMATNIPTVI 512

Query: 355 VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLN 414
            +  GR+  ++  L++R+   F   V+  T   WT +   G DDV V+   S D      
Sbjct: 513 TSQEGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGSGADDVRVMTRKSVDD----- 565

Query: 415 LSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAAIKVG 472
                  P     ++ + A+     VPP  +  FLR+   RSEW     D+ S       
Sbjct: 566 -------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRSEW-----DILSNGG---- 609

Query: 473 PCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGM 532
                          V+  +AH    ++    + L  V  +        +M +LQ     
Sbjct: 610 ---------------VVQEMAHIANGQDTGNCVSLLRVNSANSSQ---SNMLILQ----- 646

Query: 533 DENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDL 583
           +     T + +I+AP+D             D   LLPSGF I+P  +         T   
Sbjct: 647 ESCTDSTASFVIYAPVDVVAMNMVLNGGDPDYVALLPSGFAILPDGT---------TAHG 697

Query: 584 ASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIIS-SV 642
               E+G  G               S++T+AF+   +S     ++  +   V ++I+ +V
Sbjct: 698 GVIGEVGSGG---------------SLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTV 742

Query: 643 QRVALALSPSN 653
            R+  A+S  N
Sbjct: 743 DRIKAAVSCEN 753



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 92  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 147

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E ++L++ N KL   N
Sbjct: 148 HERHENTQLRSENEKLRTEN 167


>gi|302794502|ref|XP_002979015.1| hypothetical protein SELMODRAFT_450554 [Selaginella moellendorffii]
 gi|300153333|gb|EFJ19972.1| hypothetical protein SELMODRAFT_450554 [Selaginella moellendorffii]
          Length = 786

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 146/361 (40%), Gaps = 80/361 (22%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A +  L+ L P R+F+ +RY     DG   + + S+  +       P  +  R    PSG
Sbjct: 411 AEMQVLSPLVPTREFYFVRYCKQHADGVWGIVDVSVDALAR--EAAPSSN--RCRRRPSG 466

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL-AQKTTMAALRQLRQMAQEV 350
           YLI+    G S + +++H++ +  SV  + +P   S     AQ+  +   RQ  ++A  +
Sbjct: 467 YLIQDMPNGYSKVTVLEHVEYDDRSVNRIYKPYVNSGLAFGAQRWLLTLQRQCERLASLL 526

Query: 351 TQSSV--------NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
             S          N  GRR  ++  L+QR++  F   V+  T   WT +   G DDV V+
Sbjct: 527 ATSISARDLGVIPNASGRR--SMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDVRVM 584

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
              S D             P   + ++ + A+ L   VPP  +  FLR+   R+EW    
Sbjct: 585 TRKSVDN------------PGEPHGIVLSAATSLWLPVPPKRVFEFLRDERLRNEW---- 628

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVG-----HSPE 515
            D+ S   +                   +  +AH  + ++    + L  V      HS  
Sbjct: 629 -DILSNGGM-------------------VQEMAHIAKGQDPGNSVSLLRVNTLNSTHS-- 666

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRII 566
                 +M +LQ     D  ++     +++AP+D           D A   LLPSGF I+
Sbjct: 667 ------NMLILQESCTDDSGSL-----VVYAPVDIPAMNLVMQGGDPAYVALLPSGFAIL 715

Query: 567 P 567
           P
Sbjct: 716 P 716



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR---E 73
           +Y R+TP Q++ +E L+ ECP P   +RQ+L RE      +EP+Q+K WFQNRR +   +
Sbjct: 107 RYHRHTPHQIQEMEALFKECPHPDDKQRQELSREL----GLEPRQVKFWFQNRRTQLKAQ 162

Query: 74  KQRKEASRLQAVNRKLTAMNKLLME 98
           ++R E S L+    KL A N  + E
Sbjct: 163 QERAENSMLRLEIEKLRAENVTMRE 187


>gi|109729920|tpg|DAA05774.1| TPA_inf: class IV HD-Zip protein HDZ44 [Selaginella moellendorffii]
          Length = 786

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 146/361 (40%), Gaps = 80/361 (22%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A +  L+ L P R+F+ +RY     DG   + + S+  +       P  +  R    PSG
Sbjct: 411 AEMQVLSPLVPTREFYFVRYCKQHADGVWGIVDVSVDALAR--EAAPSSN--RCRRRPSG 466

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL-AQKTTMAALRQLRQMAQEV 350
           YLI+    G S + +++H++ +  SV  + +P   S     AQ+  +   RQ  ++A  +
Sbjct: 467 YLIQDMPNGYSKVTVLEHVEYDDRSVNRIYKPYVNSGLAFGAQRWLLTLQRQCERLASLL 526

Query: 351 TQSSV--------NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
             S          N  GRR  ++  L+QR++  F   V+  T   WT +   G DDV V+
Sbjct: 527 ATSISARDLGVIPNASGRR--SMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDVRVM 584

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
              S D             P   + ++ + A+ L   VPP  +  FLR+   R+EW    
Sbjct: 585 TRKSVDN------------PGEPHGIVLSAATSLWLPVPPKRVFEFLRDERLRNEW---- 628

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVG-----HSPE 515
            D+ S   +                   +  +AH  + ++    + L  V      HS  
Sbjct: 629 -DILSNGGM-------------------VQEMAHIAKGQDPGNSVSLLRVNTLNSTHS-- 666

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRII 566
                 +M +LQ     D  ++     +++AP+D           D A   LLPSGF I+
Sbjct: 667 ------NMLILQESCTDDSGSL-----VVYAPVDIPAMNLVMQGGDPAYVALLPSGFAIL 715

Query: 567 P 567
           P
Sbjct: 716 P 716



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR---E 73
           +Y R+TP Q++ +E L+ ECP P   +RQ+L RE      +EP+Q+K WFQNRR +   +
Sbjct: 107 RYHRHTPHQIQEMEALFKECPHPDDKQRQELSREL----GLEPRQVKFWFQNRRTQLKAQ 162

Query: 74  KQRKEASRLQAVNRKLTAMNKLLME 98
           ++R E S L+    KL A N  + E
Sbjct: 163 QERAENSMLRLEIEKLRAENVTMRE 187


>gi|302813433|ref|XP_002988402.1| hypothetical protein SELMODRAFT_450553 [Selaginella moellendorffii]
 gi|300143804|gb|EFJ10492.1| hypothetical protein SELMODRAFT_450553 [Selaginella moellendorffii]
          Length = 817

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 146/361 (40%), Gaps = 80/361 (22%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A +  L+ L P R+F+ +RY     DG   + + S+  +       P  +  R    PSG
Sbjct: 442 AEMQVLSPLVPTREFYFVRYCKQHADGVWGIVDVSVDALAR--EAAPSSN--RCRRRPSG 497

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL-AQKTTMAALRQLRQMAQEV 350
           YLI+    G S + +++H++ +  SV  + +P   S     AQ+  +   RQ  ++A  +
Sbjct: 498 YLIQDMPNGYSKVTVLEHVEYDDRSVNRIYKPYVNSGLAFGAQRWLLTLQRQCERLASLL 557

Query: 351 TQSSV--------NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
             S          N  GRR  ++  L+QR++  F   V+  T   WT +   G DDV V+
Sbjct: 558 ATSISARDLGVIPNASGRR--SMLKLAQRMTNNFCAGVSASTVHTWTTLSGSGEDDVRVM 615

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
              S D             P   + ++ + A+ L   VPP  +  FLR+   R+EW    
Sbjct: 616 TRKSVDN------------PGEPHGIVLSAATSLWLPVPPKRVFEFLRDERLRNEW---- 659

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVG-----HSPE 515
            D+ S   +                   +  +AH  + ++    + L  V      HS  
Sbjct: 660 -DILSNGGM-------------------VQEMAHIAKGQDPGNSVSLLRVNTLNSTHS-- 697

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRII 566
                 +M +LQ     D  ++     +++AP+D           D A   LLPSGF I+
Sbjct: 698 ------NMLILQESCTDDSGSL-----VVYAPVDIPAMNLVMQGGDPAYVALLPSGFAIL 746

Query: 567 P 567
           P
Sbjct: 747 P 747



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR---E 73
           +Y R+TP Q++ +E L+ ECP P   +RQ+L RE      +EP+Q+K WFQNRR +   +
Sbjct: 138 RYHRHTPHQIQEMEALFKECPHPDDKQRQELSREL----GLEPRQVKFWFQNRRTQLKAQ 193

Query: 74  KQRKEASRLQAVNRKLTAMNKLLME 98
           ++R E S L+    KL A N  + E
Sbjct: 194 QERAENSMLRLEIEKLRAENVTMRE 218


>gi|109729914|tpg|DAA05771.1| TPA_inf: class IV HD-Zip protein HDZ41 [Selaginella moellendorffii]
          Length = 815

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 112/458 (24%), Positives = 179/458 (39%), Gaps = 110/458 (24%)

Query: 233 ILYA----LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
           ++YA    L+ L P R+ + LRY     +G   + + S+  ++  P  PP    +R  + 
Sbjct: 425 LMYAEFQVLSPLVPTREAYFLRYCKQHAEGVWAIVDVSVDGLRENP--PPQ---LRNRLR 479

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG+LI+    G S + I+ HM+ +   V  + R L  S      K  +A L RQ  ++A
Sbjct: 480 PSGFLIQDMPNGYSKVTILQHMEYDDRQVNNMYRGLVSSGLAFGAKRWLATLQRQCERLA 539

Query: 348 ---------QEVTQSSV--------------NGWGRRPAALRALSQRLSRGFNEAVNGFT 384
                    +++  SS               N  GRR  ++  L+QR++  F   V+  T
Sbjct: 540 VLLATNISPRDLGVSSYGPADQSLLFFAVISNATGRR--SMLKLAQRMTNNFCAGVSAST 597

Query: 385 DEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAI 444
              WT +   G DDV V+   S D             P     ++ + A+ L   V P  
Sbjct: 598 VHTWTTLSGSGEDDVRVMTRKSIDN------------PGEPPGIVLSAATSLWMPVSPQR 645

Query: 445 LLRFLREH--RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFM 502
           +  FLR+   RSEW     D+ S                       +  +AH  +  +  
Sbjct: 646 VFEFLRDDRLRSEW-----DILSNGG-------------------SVQEMAHIAKGHDPG 681

Query: 503 EVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADD 555
            VI L  V           +M +LQ  S  DE+     + +++AP+D           D 
Sbjct: 682 NVISLLRVNALNTSQ---SNMLILQESS-TDESG----SLIVYAPVDIPAMNLVMQGGDP 733

Query: 556 A--PLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTI 613
           A   LLPSGF I+P                     IG     ++   S+   C+   +T+
Sbjct: 734 AYVALLPSGFAILP----------------EGPRSIGTTPETSSRASSSEPGCL---LTV 774

Query: 614 AFEFAFESHMQEHVATMARQYVRSIIS-SVQRVALALS 650
           AF+    +     +   +   V S+IS +VQR+  ALS
Sbjct: 775 AFQILVSNVPTAKLNLESVTTVNSLISCTVQRIKTALS 812



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 67/265 (25%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           ++ R+T  Q++ +E ++ ECP P   +R QL RE      +EP+Q+K WFQNRR + K  
Sbjct: 122 RFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSREL----GLEPRQVKFWFQNRRTQMKAH 177

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
           +E            A N +L  EN+RL+        EN   R+  ++ T       C   
Sbjct: 178 QE-----------RAENSMLRAENERLRS-------ENIAMREALKNATCP----HCGGP 215

Query: 137 VTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPG----------- 185
            T G+     Q           L I    L + L + +  A +++  PG           
Sbjct: 216 ATLGEMSYDEQQ----------LRIENAHLKDELDRVSSLAAKYLSKPGGGAPHGLSVQT 265

Query: 186 ------MKP-----GPDSVGIVAISHGCS--GVAARACGLVGLEPTRVAEILKDRPRGSA 232
                 + P     GP S   +A++ G S   +A R  GL  +E   VAE+         
Sbjct: 266 SLPGTSLDPSAAAFGPQSNSALAVTPGPSMLELATRPGGLSQVEKPLVAEL------AII 319

Query: 233 ILYALTTLAPARD-FWLLRYTSVLE 256
            +  L  LA +R+  W+L      E
Sbjct: 320 AMEELLALAQSREPLWILEENGAKE 344


>gi|357144757|ref|XP_003573403.1| PREDICTED: homeobox-leucine zipper protein ROC1-like [Brachypodium
           distachyon]
          Length = 812

 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 98/433 (22%), Positives = 174/433 (40%), Gaps = 92/433 (21%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     +GS  V + SL +++  P        V+    PSG LI+  
Sbjct: 442 SPLVPTRESYFVRYCKHNPEGSWAVVDVSLDSLRPSPA-------VKCRRRPSGCLIQEL 494

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVN 356
             G S +  V+H++++  SV ++ +PL  S      K  +  L RQ  ++A  +  S  N
Sbjct: 495 PNGYSKVTWVEHVEVDDRSVHDIYKPLVNSGLAFGAKRWVGTLGRQCERLASAMASSIPN 554

Query: 357 G--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           G         GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 555 GDLGVITSVEGRK--SMLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 612

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     V P  +  FLR+   RSEW     D+ S 
Sbjct: 613 D------------PGRPPGIVLNAATSFWLPVSPNTVFDFLRDETSRSEW-----DILSN 655

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
             I                 Q +  +A+  +H   + ++++     +        +M +L
Sbjct: 656 GGI----------------VQEMAHIANGRDHGNCVSLLRVNSANSNQS------NMLIL 693

Query: 527 QLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
           Q  S  DE+     + +++AP+D             D   LLPSGF I+P       S+P
Sbjct: 694 QE-SCTDESG---SSYVVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP----DGPSAP 745

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
              ++    +  G  G               S++T+AF+   +S     ++  +   V S
Sbjct: 746 LSGINEEGGVAAGKGG---------------SLLTVAFQILVDSVPTAKLSLGSVATVNS 790

Query: 638 IIS-SVQRVALAL 649
           +I+ +V+R+  A+
Sbjct: 791 LIACTVERIKAAV 803



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 121 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 176

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +++E S+L+A N KL A N
Sbjct: 177 HEKQENSQLRAENDKLRAEN 196


>gi|75134886|sp|Q6ZAR0.1|ROC1_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC1; AltName:
           Full=GLABRA 2-like homeobox protein 1; AltName:
           Full=HD-ZIP protein ROC1; AltName: Full=Homeodomain
           transcription factor ROC1; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 1
 gi|38636931|dbj|BAD03194.1| roc1(homeobox protein) [Oryza sativa Japonica Group]
 gi|38637066|dbj|BAD03323.1| roc1(homeobox protein) [Oryza sativa Japonica Group]
          Length = 784

 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 180/434 (41%), Gaps = 96/434 (22%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P+  PVQ   R    PSG LI+  
Sbjct: 418 SPLVPTRESYFVRYCKNNSDGTWAVVDVSLDSLR--PS--PVQKCRRR---PSGCLIQEM 470

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVN 356
             G S +  V+H++++  SV  + +PL  S      K  +  L RQ  ++A  +  +  N
Sbjct: 471 PNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPN 530

Query: 357 G--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           G         GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 531 GDLGVITSVEGRK--SMLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 588

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPPA +  FLR+   RSEW     D+ S 
Sbjct: 589 D------------PGRPPGIVLNAATSFWLPVPPAAVFDFLRDETSRSEW-----DILSN 631

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                               Q +  +A+  +H   + ++++     +  + ++     L 
Sbjct: 632 GG----------------AVQEMAHIANGRDHGNSVSLLRVNSANSNQSNMLI-----LQ 670

Query: 527 QLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
           + C+    +A G+   +++AP+D             D   LLPSGF I+P          
Sbjct: 671 ESCT----DASGSY--VVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP---------- 714

Query: 578 NRTLDLASALEIGPAGN-RATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
                       GP+GN +A    + + +   S++T+AF+   +S     ++  +   V 
Sbjct: 715 -----------DGPSGNAQAAVGENGSGSGGGSLLTVAFQILVDSVPTAKLSLGSVATVN 763

Query: 637 SIIS-SVQRVALAL 649
           S+I+ +V+R+  A+
Sbjct: 764 SLIACTVERIKAAV 777



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 109 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 164

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E ++L+A N KL A N
Sbjct: 165 HERHENAQLRAENDKLRAEN 184


>gi|19072102|dbj|BAB85750.1| Roc1 [Oryza sativa]
          Length = 784

 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 180/434 (41%), Gaps = 96/434 (22%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P+  PVQ   R    PSG LI+  
Sbjct: 418 SPLVPTRESYFVRYCKNNSDGTWAVVDVSLDSLR--PS--PVQKCRRR---PSGCLIQEM 470

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVN 356
             G S +  V+H++++  SV  + +PL  S      K  +  L RQ  ++A  +  +  N
Sbjct: 471 PNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPN 530

Query: 357 G--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           G         GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 531 GDLGVITSVEGRK--SMLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 588

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPPA +  FLR+   RSEW     D+ S 
Sbjct: 589 D------------PGRPPGIVLNAATSFWLPVPPAAVFDFLRDETSRSEW-----DILSN 631

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                               Q +  +A+  +H   + ++++     +  + ++     L 
Sbjct: 632 GG----------------AVQEMAHIANGRDHGNSVSLLRVNSANSNQSNMLI-----LQ 670

Query: 527 QLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
           + C+    +A G+   +++AP+D             D   LLPSGF I+P          
Sbjct: 671 ESCT----DASGSY--VVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP---------- 714

Query: 578 NRTLDLASALEIGPAGN-RATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
                       GP+GN +A    + + +   S++T+AF+   +S     ++  +   V 
Sbjct: 715 -----------DGPSGNAQAAVGENGSGSGGGSLLTVAFQILVDSVPTAKLSLGSVATVN 763

Query: 637 SIIS-SVQRVALAL 649
           S+I+ +V+R+  A+
Sbjct: 764 SLIACTVERIKAAV 777



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 109 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 164

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E ++L+A N KL A N
Sbjct: 165 HERHENAQLRAENDKLRAEN 184


>gi|242078393|ref|XP_002443965.1| hypothetical protein SORBIDRAFT_07g005180 [Sorghum bicolor]
 gi|241940315|gb|EES13460.1| hypothetical protein SORBIDRAFT_07g005180 [Sorghum bicolor]
          Length = 781

 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 98/433 (22%), Positives = 175/433 (40%), Gaps = 95/433 (21%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P M       +    PSG LI+  
Sbjct: 416 SPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRPSPVM-------KCRRRPSGCLIQEM 468

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVN 356
             G S +  V+H++++  SV  + RPL  S      K  +  L RQ  ++A  +  +  N
Sbjct: 469 PNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPN 528

Query: 357 G--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           G         GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 529 GDLGVITSIEGRK--SMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVD 586

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 587 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDETSRSEW-----DILSN 629

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                               Q +  +A+  +H   + ++++     +  + ++     L 
Sbjct: 630 GG----------------AVQEMAHIANGRDHGNCVSLLRVNSANSNQSNMLI-----LQ 668

Query: 527 QLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
           + C+    +A G+   +++AP+D             D   LLPSGF I+P   G    +P
Sbjct: 669 ESCT----DASGSY--VVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP--DGPPGMAP 720

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
           +      +ALE G                  S++T+AF+   +S     ++  +   V S
Sbjct: 721 HGE---GAALETGGG----------------SLLTVAFQILVDSVPTAKLSLGSVATVNS 761

Query: 638 IIS-SVQRVALAL 649
           +I+ +V+R+  A+
Sbjct: 762 LIACTVERIKAAV 774



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 102 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 157

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R+E ++L+A N KL A N
Sbjct: 158 HERQENAQLRAENDKLRAEN 177


>gi|449515643|ref|XP_004164858.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           HDG2-like [Cucumis sativus]
          Length = 760

 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 99/436 (22%), Positives = 171/436 (39%), Gaps = 97/436 (22%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     +G+  V + SL  ++  P +       R    PSG LI+    
Sbjct: 399 LVPTRESYFVRYCKQHGEGTWAVVDVSLDTLRPAPAL-------RCRRRPSGCLIQEMPN 451

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSV--- 355
           G S +  V+H++++   V  +   L  S      K  +A L RQ  ++A  +  S +   
Sbjct: 452 GYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLDRQCERLASAMATSIIPHG 511

Query: 356 ------NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDK 409
                 N  GR+  ++  L++R+   F   V+  T   WT +   G DDV V+   S D 
Sbjct: 512 DAGVITNQEGRK--SMLKLAERMVMSFCGGVSASTTHTWTTLSGTGADDVRVMTRKSVDD 569

Query: 410 LMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAA 467
                       P   + ++ + A+     +PP  +  FLR+   R+EW     D+ S  
Sbjct: 570 ------------PGRPSGIVLSAATSFWLPLPPNRVFHFLRDENSRNEW-----DILSNG 612

Query: 468 AIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQ 527
                               V+  +AH     +    + L  V  +        +M +LQ
Sbjct: 613 G-------------------VVQEMAHIANGRDTGNCVSLLRVNSANSSQ---SNMLILQ 650

Query: 528 LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSPN 578
             S  D+    T + +I+AP+D             D   LLPSGF I+P  S   +  P 
Sbjct: 651 ESS-TDQ----TASFVIYAPVDIVSINVVLNGGDPDYVALLPSGFAILPDGSTASSGGPG 705

Query: 579 RTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSI 638
                     +G  G+              S++T+AF+   +S     ++  +   V ++
Sbjct: 706 ----------VGEHGSGG------------SLLTVAFQILVDSVPTAKLSLGSVATVNNL 743

Query: 639 IS-SVQRVALALSPSN 653
           I+ +V+R+  +LS  N
Sbjct: 744 IACTVERIKASLSCDN 759



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE     N+EP Q+K WFQN+R + K  
Sbjct: 87  RYHRHTQHQIQQMEAFFKECPHPDDKQRKELSREL----NLEPLQVKFWFQNKRTQMKTH 142

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E ++L+  N KL A N
Sbjct: 143 HERHENTQLRTENEKLRADN 162


>gi|312282177|dbj|BAJ33954.1| unnamed protein product [Thellungiella halophila]
          Length = 749

 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 141/351 (40%), Gaps = 79/351 (22%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DGS  V + SL +++  P         R    PSG LI+    
Sbjct: 375 LVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPNP-------ISRTRRRPSGCLIQELPN 427

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNG- 357
           G S +  ++HM+++  SV  + +PL  S      K  ++ L RQ  ++A  +  +   G 
Sbjct: 428 GYSKVTWIEHMEVDDRSVHTMYKPLVHSGLAFGAKRWVSTLERQCERLASSMASNIPAGD 487

Query: 358 -------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                   GR+  ++  L++R+   F   V   T   WT M + G DDV V+   S D  
Sbjct: 488 LSVITSPEGRK--SMLKLAERMVMSFCSGVGASTAHAWTTMSSTGSDDVRVMTRKSMDD- 544

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     ++ + A+     V P  +  FLR+   RSEW     D+ S   
Sbjct: 545 -----------PGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEW-----DILSNGG 588

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGV--GHSPEDAIMPRDMFLL 526
           +                   +  +AH     E    + L  V  G+S +      +M +L
Sbjct: 589 M-------------------VQEMAHIANGREPGNCVSLLRVNSGNSSQS-----NMLIL 624

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
           Q  C+    +A G+   +I+AP+D             D   LLPSGF I+P
Sbjct: 625 QESCT----DASGSY--VIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILP 669



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 36/168 (21%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ LE  + ECP P   +R++L R+      +EP Q+K WFQN+R + K +
Sbjct: 65  RYHRHTQRQIQELESFFKECPHPDDKQRKELSRDL----GLEPLQVKFWFQNKRTQMKAQ 120

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N++L  +ND+L+        EN  +++   + T      +C   
Sbjct: 121 HERHE-----------NQILKSDNDKLRA-------ENNRYKEALSNATCP----NCGGP 158

Query: 137 VTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
              G+     QH          L I    L E + + +  A ++V  P
Sbjct: 159 AAIGEMSFDEQH----------LRIENARLREEIDRISAIAAKYVGKP 196


>gi|357453443|ref|XP_003596998.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355486046|gb|AES67249.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 774

 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 142/358 (39%), Gaps = 75/358 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           +A L   + L P R+ + +RY     DG+  V + SL N++  P+        R+   PS
Sbjct: 406 TAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPS-------ARSRRRPS 458

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
           G LI+    G S +  V+H++++   V  + + L  S      K  +A L RQ  ++A  
Sbjct: 459 GCLIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWIATLDRQCERLASA 518

Query: 350 VTQSS--------VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
           +  +          N  GR+  ++  L++R+   F   V+  T   WT +   G DDV V
Sbjct: 519 MATNIPTVDVGVITNQDGRK--SMLKLAERMCISFCAGVSASTAHTWTTLSGTGADDVRV 576

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S D           G PA    VL A  S  L  VPP  +  FLR+   RSEW   
Sbjct: 577 MTRKSVDD---------PGRPA--GIVLSAATSFWLP-VPPKRVFEFLRDENSRSEW--- 621

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S                      V+  +AH     +    + L  V  +      
Sbjct: 622 --DILSNGG-------------------VVQEMAHIANGRDTGNCVSLLRVNSANSSQ-- 658

Query: 520 PRDMFLLQLCSGMDENAVGTCAE-LIFAPID---------ASFADDAPLLPSGFRIIP 567
             +M +LQ      E+   T    +I+AP+D             D   LLPSGF I+P
Sbjct: 659 -SNMLILQ------ESCTDTTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 709



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR---E 73
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R +   +
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 162

Query: 74  KQRKEASRLQAVNRKLTAMNKLLME 98
           ++R E + L+  N KL A N    E
Sbjct: 163 QERHENTSLRTENEKLRADNMRFRE 187


>gi|1881536|gb|AAB49378.1| meristem L1 layer homeobox protein [Arabidopsis thaliana]
          Length = 718

 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 179/437 (40%), Gaps = 86/437 (19%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DG   V + SL +++  P         R+   PSG LI+  + 
Sbjct: 338 LVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSP-------ITRSRRRPSGCLIQELQN 390

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQ------ 352
           G S +  V+H++++  SV  + +PL  +      K  +A L RQ  ++A  +        
Sbjct: 391 GYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMASNIPACD 450

Query: 353 -SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLM 411
            S +     R + L+ L++R+   F   V   T + WT +   G DDV V+   S D   
Sbjct: 451 LSVITSPEGRKSMLK-LAERMVMSFCTGVGASTADAWTTLSTTGSDDVRVMTRKSMDD-- 507

Query: 412 GLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAAI 469
                     P     ++ + A+     V P  +  FLR+   RSEW     D+ S   +
Sbjct: 508 ----------PGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEW-----DILSNGGL 552

Query: 470 KVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGV--GHSPEDAIMPRDMFLLQ 527
                              +  +AH     +    + L  V  G+S +      +M +LQ
Sbjct: 553 -------------------VQEMAHIANGRDPGNSVSLLRVNSGNSGQS-----NMLILQ 588

Query: 528 -LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
             C+    +A G+   +I+AP+D             D   LLPSGF I+P     + S+ 
Sbjct: 589 ESCT----DASGSY--VIYAPVDIIAMNVVLSGGDPDYVALLPSGFAILP-----DGSAR 637

Query: 578 NRTLDLASALEIGPAGNRATNN---YSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
                  ++   G  G    NN    +T  +C  S++T+AF+   +S     ++  +   
Sbjct: 638 GGGGSANASAGAGVEGGGEGNNLEVVTTTGSCGGSLLTVAFQILVDSVPTAKLSLGSVAT 697

Query: 635 VRSIIS-SVQRVALALS 650
           V S+I  +V+R+  AL+
Sbjct: 698 VNSLIKCTVERIKAALA 714



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 36/170 (21%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ LE  + ECP P   +R++L RE     ++EP Q+K WFQN+R + K +
Sbjct: 21  RYHRHTQRQIQELESFFKECPHPDDKQRKELSREL----SLEPLQVKFWFQNKRTQMKAQ 76

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N++L  END+L+        EN  ++    + T      +C   
Sbjct: 77  HERHE-----------NQILKSENDKLRA-------ENNRYKDALSNATCP----NCGGP 114

Query: 137 VTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 186
              G+     QH          L I    L E + + +  A ++V  P M
Sbjct: 115 AAIGEMSFDEQH----------LRIENARLREEIDRISAIAAKYVGKPLM 154


>gi|255554965|ref|XP_002518520.1| homeobox protein, putative [Ricinus communis]
 gi|223542365|gb|EEF43907.1| homeobox protein, putative [Ricinus communis]
          Length = 727

 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 148/367 (40%), Gaps = 76/367 (20%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DG+  V + SL N++  P         R+    SG +I+    
Sbjct: 369 LVPTRENYFVRYCKQHVDGTWAVVDVSLDNLRPSP-------IARSRRRLSGCVIQDLPN 421

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNG- 357
           G S +  ++H++++  SV  + RPL  S      K  +A L RQ  ++A  +  +   G 
Sbjct: 422 GYSKVTWIEHIEVDDRSVHSLYRPLINSGLAFGAKRWVAILDRQCERLASSMAINIPAGD 481

Query: 358 -------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                   GR+  ++  L++R+   F   V   T   WT +   G DDV V+   S D  
Sbjct: 482 LCVITSPEGRK--SMLKLAERMVMSFCSGVGASTAHAWTTLSATGSDDVRVMTRKSMDD- 538

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE--HRSEWADNNIDVYSAAA 468
                    G P     VLCA  S  L  VPP  + +FL +  HRSEW     D+ S   
Sbjct: 539 --------PGRPP--GIVLCAATSFWLP-VPPKRVFQFLSDENHRSEW-----DILSN-- 580

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
                           G QV   +AH     +    + L  V  +  ++     + L + 
Sbjct: 581 ----------------GGQV-EEMAHIANGRDPGNCVSLLRVISA--NSSQSNMLTLQES 621

Query: 529 CSGMDENAVGTCAELIFAPIDASF---------ADDAPLLPSGFRIIPLDSGKETSSPNR 579
           C+        T + +I+AP+D +           D   LLPSGF I+P   G    SP  
Sbjct: 622 CTD------STGSYVIYAPVDIAAMNIVLSGGDPDYVALLPSGFAILPDGPG---FSPGI 672

Query: 580 TLDLASA 586
            LD+ S 
Sbjct: 673 ILDVGSG 679



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 42/171 (24%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 61  RYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 116

Query: 75  -QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
            +R+E S L+A N KL A       EN+R ++ +S     N                  C
Sbjct: 117 HERQENSILKAENEKLRA-------ENNRYKEALSNASCPN------------------C 151

Query: 134 ESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
               T G+     QH          L I    L E + + +G A +++  P
Sbjct: 152 GGPATLGEISFDEQH----------LRIENARLREEIDRLSGIAAKYIGKP 192


>gi|449453486|ref|XP_004144488.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Cucumis
           sativus]
          Length = 761

 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 100/436 (22%), Positives = 170/436 (38%), Gaps = 96/436 (22%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     +G+  V + SL  ++  P +       R    PSG LI+    
Sbjct: 399 LVPTRESYFVRYCKQHGEGTWAVVDVSLDTLRPAPAL-------RCRRRPSGCLIQEMPN 451

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSV--- 355
           G S +  V+H++++   V  +   L  S      K  +A L RQ  ++A  +  S +   
Sbjct: 452 GYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLDRQCERLASAMATSIIPNG 511

Query: 356 ------NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDK 409
                 N  GR+  ++  L++R+   F   V+  T   WT +   G DDV V+   S D 
Sbjct: 512 DAGVITNQEGRK--SMLKLAERMVMSFCGGVSASTTHTWTTLSGTGADDVRVMTRKSVDD 569

Query: 410 LMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAA 467
                       P   + ++ + A+     +PP  +  FLR+   R+EW     D+ S  
Sbjct: 570 ------------PGRPSGIVLSAATSFWLPLPPNRVFHFLRDENSRNEW-----DILSNG 612

Query: 468 AIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQ 527
                               V+  +AH     +    + L  V  +        +M +LQ
Sbjct: 613 G-------------------VVQEMAHIANGRDTGNCVSLLRVNSANSSQ---SNMLILQ 650

Query: 528 LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSPN 578
             S  D+    T + +I+AP+D             D   LLPSGF I+P  S   +   N
Sbjct: 651 ESS-TDQ----TASFVIYAPVDIVSINVVLNGGDPDYVALLPSGFAILPDGSTASSGGAN 705

Query: 579 RTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSI 638
                    E G  G               S++T+AF+   +S     ++  +   V ++
Sbjct: 706 ------GVGEHGSGG---------------SLLTVAFQILVDSVPTAKLSLGSVATVNNL 744

Query: 639 IS-SVQRVALALSPSN 653
           I+ +V+R+  +LS  N
Sbjct: 745 IACTVERIKASLSCDN 760



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE     N+EP Q+K WFQN+R + K  
Sbjct: 87  RYHRHTQHQIQQMEAFFKECPHPDDKQRKELSREL----NLEPLQVKFWFQNKRTQMKTH 142

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E ++L+  N KL A N
Sbjct: 143 HERHENTQLRTENEKLRADN 162


>gi|224028395|gb|ACN33273.1| unknown [Zea mays]
 gi|345194178|tpg|DAA34954.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413921155|gb|AFW61087.1| outer cell layer5a [Zea mays]
          Length = 796

 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 174/433 (40%), Gaps = 93/433 (21%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P        ++    PSG LI+  
Sbjct: 428 SPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRPSPV-------IKCRRRPSGCLIQEM 480

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVN 356
             G S +  V+H++++  SV  + RPL  S      K  +  L RQ  ++A  +  +  N
Sbjct: 481 PNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPN 540

Query: 357 G--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           G         GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 541 GDLGVITSIEGRK--SMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVD 598

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 599 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDETSRSEW-----DILSN 641

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                               Q +  +A+  +H   + ++++     +  + ++     L 
Sbjct: 642 GG----------------AVQEMAHIANGRDHGNCVSLLRVNSANSNQSNMLI-----LQ 680

Query: 527 QLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
           + C+    +A G+   +++AP+D             D   LLPSGF I+P         P
Sbjct: 681 ESCT----DASGSY--VVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP------DGPP 728

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
                        PAG   ++    ++    S++T+AF+   +S     ++  +   V S
Sbjct: 729 -------------PAGAAPSHGEGLDTGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNS 775

Query: 638 IIS-SVQRVALAL 649
           +I+ +V+R+  A+
Sbjct: 776 LIACTVERIKAAV 788



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 162

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E ++L+A N KL A N
Sbjct: 163 HERHENAQLRAENDKLRAEN 182


>gi|413921156|gb|AFW61088.1| outer cell layer5a [Zea mays]
          Length = 785

 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 174/433 (40%), Gaps = 93/433 (21%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P        ++    PSG LI+  
Sbjct: 417 SPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRPSPV-------IKCRRRPSGCLIQEM 469

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVN 356
             G S +  V+H++++  SV  + RPL  S      K  +  L RQ  ++A  +  +  N
Sbjct: 470 PNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPN 529

Query: 357 G--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           G         GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 530 GDLGVITSIEGRK--SMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVD 587

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 588 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDETSRSEW-----DILSN 630

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                               Q +  +A+  +H   + ++++     +  + ++     L 
Sbjct: 631 GG----------------AVQEMAHIANGRDHGNCVSLLRVNSANSNQSNMLI-----LQ 669

Query: 527 QLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
           + C+    +A G+   +++AP+D             D   LLPSGF I+P         P
Sbjct: 670 ESCT----DASGSY--VVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP------DGPP 717

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
                        PAG   ++    ++    S++T+AF+   +S     ++  +   V S
Sbjct: 718 -------------PAGAAPSHGEGLDTGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNS 764

Query: 638 IIS-SVQRVALAL 649
           +I+ +V+R+  A+
Sbjct: 765 LIACTVERIKAAV 777



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 96  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 151

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E ++L+A N KL A N
Sbjct: 152 HERHENAQLRAENDKLRAEN 171


>gi|356497482|ref|XP_003517589.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 731

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 98/437 (22%), Positives = 170/437 (38%), Gaps = 97/437 (22%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DG   V + SL N++  P+        R+   PSG LI+    
Sbjct: 371 LVPTRENYFVRYCKQQPDGIWAVVDVSLDNLR--PST-----ISRSRRRPSGCLIQELPN 423

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNG- 357
           G S +  ++H++++  +V  + R L  S      K  +A L RQ  ++A  +  +   G 
Sbjct: 424 GYSKVTWIEHVEVDDRAVHSIYRTLVNSGLAFGAKRWVATLERQCERLASSMANNIPAGD 483

Query: 358 -------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                   GR+  ++  L++R+   +   V   T   WT +   G DDV V+   S D+ 
Sbjct: 484 LCVITSAEGRK--SMMKLAERMVMSYCTGVGASTAHAWTTLSATGCDDVRVMTRKSTDE- 540

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     ++ + A+     VPP  +  FLR+   R+EW     D+ S   
Sbjct: 541 -----------PGRPPGIVLSAATSFWLPVPPKRVFHFLRDQNSRNEW-----DILSNGG 584

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
           +                   +  LAH     +    + L  V  +        +M +LQ 
Sbjct: 585 L-------------------VQELAHIANGRDPGNCVSLLRVNSANSSQ---SNMLILQ- 621

Query: 529 CSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSPNR 579
               +     T + +++AP+D             D   LLPSGF I+P            
Sbjct: 622 ----ESCTDSTGSYVVYAPVDIVAMNVVLSGGDPDYVALLPSGFAILP------------ 665

Query: 580 TLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSII 639
             D   AL  GP  +  +           S++T+AF+   +S     ++  +   V S+I
Sbjct: 666 --DGPPALNGGPIHDVGSGG---------SLLTVAFQILVDSAPTAKLSLGSVATVNSLI 714

Query: 640 S-SVQRVALALSPSNIS 655
             +V+R+ +A+   N +
Sbjct: 715 KCTVERIKVAVIRDNTT 731



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T  Q+E +E  + +CP P   +R++L RE      +EP Q+K WFQN+R + K   
Sbjct: 66  YRRHTQRQIEEMEAFFKQCPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQH 121

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E + L+A N KL A N    E
Sbjct: 122 ERNENAILKAENEKLRAENSRYKE 145


>gi|162462636|ref|NP_001105127.1| outer cell layer5a [Zea mays]
 gi|8920427|emb|CAB96425.1| OCL5 protein [Zea mays]
          Length = 795

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 174/433 (40%), Gaps = 93/433 (21%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P        ++    PSG LI+  
Sbjct: 427 SPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRPSPV-------IKCRRRPSGCLIQEM 479

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVN 356
             G S +  V+H++++  SV  + RPL  S      K  +  L RQ  ++A  +  +  N
Sbjct: 480 PNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPN 539

Query: 357 G--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           G         GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 540 GDLGVITSIEGRK--SMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVD 597

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 598 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDETSRSEW-----DILSN 640

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                               Q +  +A+  +H   + ++++     +  + ++     L 
Sbjct: 641 GG----------------AVQEMAHIANGRDHGNCVSLLRVNSANSNQSNMLI-----LQ 679

Query: 527 QLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
           + C+    +A G+   +++AP+D             D   LLPSGF I+P         P
Sbjct: 680 ESCT----DASGSY--VVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP------DGPP 727

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
                        PAG   ++    ++    S++T+AF+   +S     ++  +   V S
Sbjct: 728 -------------PAGAAPSHGEGLDAGGGGSLLTVAFQILVDSVPTGKLSLGSVATVNS 774

Query: 638 IIS-SVQRVALAL 649
           +I+ +V+R+  A+
Sbjct: 775 LIACTVERIKAAV 787



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 162

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E ++L+A N KL A N    E
Sbjct: 163 HERHENAQLRAENDKLRAENMRYKE 187


>gi|222640035|gb|EEE68167.1| hypothetical protein OsJ_26285 [Oryza sativa Japonica Group]
          Length = 577

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 100/432 (23%), Positives = 179/432 (41%), Gaps = 96/432 (22%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DG+  V + SL +++  P+  PVQ   R    PSG LI+    
Sbjct: 213 LVPTRESYFVRYCKNNSDGTWAVVDVSLDSLR--PS--PVQKCRRR---PSGCLIQEMPN 265

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNG- 357
           G S +  V+H++++  SV  + +PL  S      K  +  L RQ  ++A  +  +  NG 
Sbjct: 266 GYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPNGD 325

Query: 358 -------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                   GR+  ++  L++R+   F   V       WT +   G +DV V+   S D  
Sbjct: 326 LGVITSVEGRK--SMLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDD- 382

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     ++   A+     VPPA +  FLR+   RSEW     D+ S   
Sbjct: 383 -----------PGRPPGIVLNAATSFWLPVPPAAVFDFLRDETSRSEW-----DILSNGG 426

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
                             Q +  +A+  +H   + ++++     +  + ++     L + 
Sbjct: 427 ----------------AVQEMAHIANGRDHGNSVSLLRVNSANSNQSNMLI-----LQES 465

Query: 529 CSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSPNR 579
           C+    +A G+   +++AP+D             D   LLPSGF I+P            
Sbjct: 466 CT----DASGSY--VVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP------------ 507

Query: 580 TLDLASALEIGPAGN-RATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSI 638
                     GP+GN +A    + + +   S++T+AF+   +S     ++  +   V S+
Sbjct: 508 ---------DGPSGNAQAAVGENGSGSGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSL 558

Query: 639 IS-SVQRVALAL 649
           I+ +V+R+  A+
Sbjct: 559 IACTVERIKAAV 570


>gi|22328861|ref|NP_193906.2| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|79325215|ref|NP_001031692.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|75330714|sp|Q8RWU4.1|ATML1_ARATH RecName: Full=Homeobox-leucine zipper protein MERISTEM L1; AltName:
           Full=HD-ZIP protein ATML1; AltName: Full=Homeodomain
           transcription factor ATML1
 gi|20268701|gb|AAM14054.1| putative L1-specific homeobox gene ATML1/ovule-specific homeobox
           protein A20 [Arabidopsis thaliana]
 gi|23297714|gb|AAN12908.1| putative L1-specific homeobox gene ATML1/ovule-specific homeobox
           protein A20 [Arabidopsis thaliana]
 gi|110739777|dbj|BAF01795.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
 gi|332659098|gb|AEE84498.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|332659099|gb|AEE84499.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
          Length = 762

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 178/437 (40%), Gaps = 86/437 (19%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DG   V + SL +++  P         R+   PSG LI+  + 
Sbjct: 382 LVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSP-------ITRSRRRPSGCLIQELQN 434

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQ------ 352
           G S +  V+H++++  SV  + +PL  +      K  +A L RQ  ++A  +        
Sbjct: 435 GYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMASNIPACD 494

Query: 353 -SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLM 411
            S +     R + L+ L++R+   F   V   T   WT +   G DDV V+   S D   
Sbjct: 495 LSVITSPEGRKSMLK-LAERMVMSFCTGVGASTAHAWTTLSTTGSDDVRVMTRKSMDD-- 551

Query: 412 GLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAAI 469
                     P     ++ + A+     V P  +  FLR+   RSEW     D+ S   +
Sbjct: 552 ----------PGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEW-----DILSNGGL 596

Query: 470 KVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGV--GHSPEDAIMPRDMFLLQ 527
                              +  +AH     +    + L  V  G+S +      +M +LQ
Sbjct: 597 -------------------VQEMAHIANGRDPGNSVSLLRVNSGNSGQS-----NMLILQ 632

Query: 528 -LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
             C+    +A G+   +I+AP+D             D   LLPSGF I+P     + S+ 
Sbjct: 633 ESCT----DASGSY--VIYAPVDIIAMNVVLSGGDPDYVALLPSGFAILP-----DGSAR 681

Query: 578 NRTLDLASALEIGPAGNRATNN---YSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
                  ++   G  G    NN    +T  +C  S++T+AF+   +S     ++  +   
Sbjct: 682 GGGGSANASAGAGVEGGGEGNNLEVVTTTGSCGGSLLTVAFQILVDSVPTAKLSLGSVAT 741

Query: 635 VRSIIS-SVQRVALALS 650
           V S+I  +V+R+  AL+
Sbjct: 742 VNSLIKCTVERIKAALA 758



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 36/170 (21%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ LE  + ECP P   +R++L RE     ++EP Q+K WFQN+R + K +
Sbjct: 65  RYHRHTQRQIQELESFFKECPHPDDKQRKELSREL----SLEPLQVKFWFQNKRTQMKAQ 120

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N++L  END+L+        EN  ++    + T      +C   
Sbjct: 121 HERHE-----------NQILKSENDKLRA-------ENNRYKDALSNATCP----NCGGP 158

Query: 137 VTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 186
              G+     QH          L I    L E + + +  A ++V  P M
Sbjct: 159 AAIGEMSFDEQH----------LRIENARLREEIDRISAIAAKYVGKPLM 198


>gi|224128938|ref|XP_002320458.1| predicted protein [Populus trichocarpa]
 gi|222861231|gb|EEE98773.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 136/354 (38%), Gaps = 73/354 (20%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           T L P R+ + +RY     DG+  V + SL N++  P         R    PSG LI+  
Sbjct: 367 TPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPG-------ARCRRRPSGCLIQEM 419

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEVTQ 352
             G S +  V+H++++   V  + + L  S      K  +A L     R    MA  +  
Sbjct: 420 LNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNIPA 479

Query: 353 SSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
             V    N  GR+  ++  L++R+   F   V+  T   WT +   G DDV V+   S D
Sbjct: 480 GDVGVITNQEGRK--SMMKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 537

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++ + A+     VPP  +  FLR+   R+EW     D+ S 
Sbjct: 538 D------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDESTRNEW-----DILSN 580

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                                V+  +AH     +    + L  V  +        +M +L
Sbjct: 581 GG-------------------VVQEMAHIANGRDTGNCVSLLRVNSANSSQ---SNMLIL 618

Query: 527 QLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSG 571
           Q     +  A  T + +I+AP+D             D   LLPSGF ++P  +G
Sbjct: 619 Q-----ESCADQTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAVLPDGTG 667



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 61  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 116

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E ++L+  N KL A N
Sbjct: 117 HERHENTQLRNENEKLRADN 136


>gi|224069018|ref|XP_002302880.1| predicted protein [Populus trichocarpa]
 gi|222844606|gb|EEE82153.1| predicted protein [Populus trichocarpa]
          Length = 756

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 102/434 (23%), Positives = 171/434 (39%), Gaps = 97/434 (22%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           T L P R+ + +RY     DG+  V + SL +I+ GP         R    PSG LI+  
Sbjct: 395 TPLVPTRESYYVRYCKQHADGTWAVVDVSLDSIRPGPA-------ARCRRRPSGCLIQEM 447

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSS-- 354
             G S +  V+H++++   V  + + L  S      K  +A L RQ  ++A  +  +   
Sbjct: 448 PNGYSKVTWVEHVEVDDRGVHNLYKHLVSSGHAFGAKRWVATLNRQCERLASAMATNIPA 507

Query: 355 ------VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
                  N  GR+  ++  L++R+   F   V+  T   WT +   G DDV V+   S D
Sbjct: 508 GDAGVITNQEGRK--SMMKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 565

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++ + A+     VPP  +  FLR+   R+EW     D+ S 
Sbjct: 566 D------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENTRNEW-----DILSN 608

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                                V+  +AH     +    + L  V  +        +M +L
Sbjct: 609 GG-------------------VVQEMAHIANGRDTGNCVSLIRVNSANSSQ---SNMLIL 646

Query: 527 QLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
           Q  S  D+    T + +I+AP+D             D   LLPSGF I P          
Sbjct: 647 QE-SCTDQ----TASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAIFP---------- 691

Query: 578 NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRS 637
               D  +A  +G   + +T           S++T+AF+   +S     ++  +   V +
Sbjct: 692 ----DGTAAHGVGMDESGSTGG---------SLLTVAFQILVDSVPTAKLSLGSVATVNN 738

Query: 638 IIS-SVQRVALALS 650
           +I+ +V+R+  +LS
Sbjct: 739 LIACTVERIKASLS 752



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 89  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 144

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E ++L+  N KL A N
Sbjct: 145 HERHENTQLRNENEKLRADN 164


>gi|4455283|emb|CAB36819.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
 gi|7268972|emb|CAB81282.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
          Length = 718

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 178/437 (40%), Gaps = 86/437 (19%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DG   V + SL +++  P         R+   PSG LI+  + 
Sbjct: 338 LVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSP-------ITRSRRRPSGCLIQELQN 390

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQ------ 352
           G S +  V+H++++  SV  + +PL  +      K  +A L RQ  ++A  +        
Sbjct: 391 GYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMASNIPACD 450

Query: 353 -SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLM 411
            S +     R + L+ L++R+   F   V   T   WT +   G DDV V+   S D   
Sbjct: 451 LSVITSPEGRKSMLK-LAERMVMSFCTGVGASTAHAWTTLSTTGSDDVRVMTRKSMDD-- 507

Query: 412 GLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAAI 469
                     P     ++ + A+     V P  +  FLR+   RSEW     D+ S   +
Sbjct: 508 ----------PGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEW-----DILSNGGL 552

Query: 470 KVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGV--GHSPEDAIMPRDMFLLQ 527
                              +  +AH     +    + L  V  G+S +      +M +LQ
Sbjct: 553 -------------------VQEMAHIANGRDPGNSVSLLRVNSGNSGQS-----NMLILQ 588

Query: 528 -LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
             C+    +A G+   +I+AP+D             D   LLPSGF I+P     + S+ 
Sbjct: 589 ESCT----DASGSY--VIYAPVDIIAMNVVLSGGDPDYVALLPSGFAILP-----DGSAR 637

Query: 578 NRTLDLASALEIGPAGNRATNN---YSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
                  ++   G  G    NN    +T  +C  S++T+AF+   +S     ++  +   
Sbjct: 638 GGGGSANASAGAGVEGGGEGNNLEVVTTTGSCGGSLLTVAFQILVDSVPTAKLSLGSVAT 697

Query: 635 VRSIIS-SVQRVALALS 650
           V S+I  +V+R+  AL+
Sbjct: 698 VNSLIKCTVERIKAALA 714



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 36/170 (21%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ LE  + ECP P   +R++L RE     ++EP Q+K WFQN+R + K +
Sbjct: 21  RYHRHTQRQIQELESFFKECPHPDDKQRKELSREL----SLEPLQVKFWFQNKRTQMKAQ 76

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N++L  END+L+        EN  ++    + T      +C   
Sbjct: 77  HERHE-----------NQILKSENDKLRA-------ENNRYKDALSNATCP----NCGGP 114

Query: 137 VTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 186
              G+     QH          L I    L E + + +  A ++V  P M
Sbjct: 115 AAIGEMSFDEQH----------LRIENARLREEIDRISAIAAKYVGKPLM 154


>gi|356540579|ref|XP_003538765.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 732

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 97/435 (22%), Positives = 166/435 (38%), Gaps = 97/435 (22%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DG   V + SL N++            R+   PSG LI+    
Sbjct: 371 LVPTRENYFVRYCKQQPDGIWAVVDVSLDNLR-------PNTISRSRRRPSGCLIQELPN 423

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNG- 357
           G S +  ++H++++  +V  + RPL  S      K  +A L RQ  ++A  +  +   G 
Sbjct: 424 GYSKVTWIEHVEVDDRAVHSIYRPLVNSGLAFGAKRWVATLDRQCERLASSMANNIPAGD 483

Query: 358 -------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                   GR+  ++  L++R+   +   V   T   WT +   G DDV V+   S D+ 
Sbjct: 484 LCVITSAEGRK--SMMKLAERMVMSYCTGVGASTAHAWTTLSATGCDDVRVMTRKSTDE- 540

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     ++ + A+     VPP  +  FLR+   R+EW     D+ S   
Sbjct: 541 -----------PGRPPGIVLSAATSFWLPVPPNRVFDFLRDENSRNEW-----DILSNGG 584

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
           +                   +  LAH     +    + L  V  +        +M +LQ 
Sbjct: 585 L-------------------VQELAHIANGRDPGNCVSLLRVNSANSSQ---SNMLILQ- 621

Query: 529 CSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSPNR 579
               +     T + +++AP+D             D   LLPSGF I+P            
Sbjct: 622 ----ESCTDSTGSYVVYAPVDIVAMNVVLSGGDPDYVALLPSGFAILP------------ 665

Query: 580 TLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSII 639
             D   AL  GP     +           S++T+ F+   +S     ++  +   V S+I
Sbjct: 666 --DGPPALNGGPMHEVGSGG---------SLLTVGFQILVDSAPTAKLSLGSVATVNSLI 714

Query: 640 S-SVQRVALALSPSN 653
             +V+R+ +A+   N
Sbjct: 715 KCTVERIKVAVIRDN 729



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 36/167 (21%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
           Y R+T  Q+E +E  + + P P   +R++L RE      +EP Q+K WFQN+R + K + 
Sbjct: 66  YRRHTQRQIEEMEAFFKQFPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQH 121

Query: 78  EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESVV 137
           E +            N +L  EN++L+        EN  +++   + T      +C    
Sbjct: 122 ERNE-----------NAILKTENEKLRA-------ENNRYKEALSNATCP----NCGGSA 159

Query: 138 TSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
             G+     QH          L I    L E + + +G A ++V  P
Sbjct: 160 ALGEMSFDEQH----------LRIENARLREEIDRISGIAAKYVGKP 196


>gi|356517624|ref|XP_003527487.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 729

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 139/357 (38%), Gaps = 73/357 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           +A L   T L P R+ + +RY     DG+  V + SL N++  P+        R    PS
Sbjct: 358 TAELQLPTPLVPTRESYFVRYCKQHGDGTWAVVDVSLDNLRPSPS-------ARCRRRPS 410

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
           G LI+    G S +  V+H++++   V  + + L  S      K  +A L RQ  ++A  
Sbjct: 411 GCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRLVATLDRQCERLASA 470

Query: 350 VTQSS--------VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
           +  +          N  GR+  ++  L++R+   F   V+  T   WT +   G DDV V
Sbjct: 471 MATNIPTVDVGVITNQEGRK--SMMKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRV 528

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S D             P     ++ + A+     VPP  +  FLR+   R+EW   
Sbjct: 529 MTRKSVDD------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRNEW--- 573

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S                      V+  +AH     +    + L  V  +      
Sbjct: 574 --DILSNGG-------------------VVQEMAHIANGRDTGNCVSLLRVNSANSSQ-- 610

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
             +M +LQ     +     T + +I+AP+D             D   LLPSGF I+P
Sbjct: 611 -SNMLILQ-----ESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP 661



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 57  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 112

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E + L+  N KL A N
Sbjct: 113 HERHENTNLRTENEKLRADN 132


>gi|218200586|gb|EEC83013.1| hypothetical protein OsI_28071 [Oryza sativa Indica Group]
          Length = 765

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 99/434 (22%), Positives = 179/434 (41%), Gaps = 96/434 (22%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P+  PVQ   R    PSG LI+  
Sbjct: 399 SPLVPTRESYFVRYCKNNSDGTWAVVDVSLDSLR--PS--PVQKCRRR---PSGCLIQEM 451

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVN 356
             G S +  V+H++++  SV  + +PL  S      K  +  L RQ  ++A  +  +  N
Sbjct: 452 PNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPN 511

Query: 357 G--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           G         GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 512 GDLGVITSVEGRK--SMLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 569

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 570 D------------PGRPPGIVLNAATSFWLPVPPTAVFDFLRDETSRSEW-----DILSN 612

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                               Q +  +A+  +H   + ++++     +  + ++     L 
Sbjct: 613 GG----------------AVQEMAHIANGRDHGNSVSLLRVNSANSNQSNMLI-----LQ 651

Query: 527 QLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
           + C+    +A G+   +++AP+D             D   LLPSGF I+P          
Sbjct: 652 ESCT----DASGSY--VVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP---------- 695

Query: 578 NRTLDLASALEIGPAGN-RATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
                       GP+GN +A    + + +   S++T+AF+   +S     ++  +   V 
Sbjct: 696 -----------DGPSGNAQAAVGENGSGSGGGSLLTVAFQILVDSVPTAKLSLGSVATVN 744

Query: 637 SIIS-SVQRVALAL 649
           S+I+ +V+R+  A+
Sbjct: 745 SLIACTVERIKAAV 758



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 14/77 (18%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q           + +R
Sbjct: 103 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQ----------NQHER 148

Query: 77  KEASRLQAVNRKLTAMN 93
            E ++L+A N KL A N
Sbjct: 149 HENAQLRAENDKLRAEN 165


>gi|356520461|ref|XP_003528880.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 829

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 174/442 (39%), Gaps = 89/442 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+     +G   V + S+ +I+     P    FV    LPSG
Sbjct: 449 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDSIRESSGAPT---FVNCRRLPSG 505

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ--------L 343
            +++    G S +  V+H + +   V ++ RPL  S      +  +A L++        +
Sbjct: 506 CVVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILM 565

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVL 402
              A     S++   GRR  ++  L+QR++  F   V   T   W  +    +D DV V+
Sbjct: 566 SSAAPSRDHSAITAGGRR--SMMKLAQRMTNNFCAGVCASTVHKWNKLNAGNVDEDVRVM 623

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
              S D             P     ++ + A+ +   V P  L  FLR+   RSEW    
Sbjct: 624 TRKSVDD------------PGEPPGIVLSAATSVWLPVSPHRLFDFLRDERLRSEW---- 667

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            D+ S      GP             Q +  +A   +H   + +++   +  +       
Sbjct: 668 -DILSNG----GPM------------QEMAHIAKGQDHGNAVSLLRASAINSNQS----- 705

Query: 521 RDMFLLQLCSGMDENAVGTCAEL-IFAPID-------ASFADDA--PLLPSGFRIIPLDS 570
             M +LQ      E  +     L ++AP+D        +  D A   LLPSGF I+P   
Sbjct: 706 -SMLILQ------ETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP--D 756

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTN--STCMRSVMTIAFEFAFESHMQEHVA 628
           G  +  P             P G  +T N   N  +    S++T+AF+    S     + 
Sbjct: 757 GPGSRGP-------------PNGPTSTTNGGDNGVTRVSGSLLTVAFQILVNSLPTAKLT 803

Query: 629 TMARQYVRSIIS-SVQRVALAL 649
             + + V ++IS +VQ++  AL
Sbjct: 804 VESVETVNNLISCTVQKIKAAL 825



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREK- 74
           +Y R+TP+Q++ LE L+ ECP P   +R +L R  C     +E +Q+K WFQNRR + K 
Sbjct: 132 RYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLC-----LETRQVKFWFQNRRTQMKT 186

Query: 75  --QRKEASRLQAVNRKLTAMN 93
             +R E + L+  N KL A N
Sbjct: 187 QLERHENTLLRQENDKLRAEN 207


>gi|224063979|ref|XP_002301331.1| predicted protein [Populus trichocarpa]
 gi|222843057|gb|EEE80604.1| predicted protein [Populus trichocarpa]
          Length = 790

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 104/439 (23%), Positives = 176/439 (40%), Gaps = 82/439 (18%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L+ L+ L P R+   LR+     +G   V + S+  I++    PP   FV    LPSG
Sbjct: 409 AELHVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRDTSGAPPT--FVNCRRLPSG 466

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEV 350
            +++    G S +  V+H   +   + ++ RP+  S      +  +A L RQ   +A  +
Sbjct: 467 CVVQDMPNGYSKVTWVEHAQYDERQIHQLYRPVISSGMGFGAQRWIATLQRQCECLAILL 526

Query: 351 T-------QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVL 402
           +        +++   GRR  ++  L+QR++  F   V   T   W  +    +D DV V+
Sbjct: 527 SSNVPSRDHTAITTSGRR--SMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVM 584

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHR--SEWADNN 460
              S D             P     ++ + A+ +   V P  L  FLR  R  SEW    
Sbjct: 585 TRKSVDD------------PGEPPGIVLSAATSVWLPVSPQRLFDFLRNERLRSEW---- 628

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            D+ S      GP               +  +AH  + ++    + L  +  S  +A   
Sbjct: 629 -DILSNG----GP---------------MQEMAHIAKGQDHGNCVSL--LRASAMNANQS 666

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPIDA-------SFADDA--PLLPSGFRIIPLDSG 571
             + L + C     +A G+   +++AP+D        +  D A   LLPSGF I+P   G
Sbjct: 667 SMLILQETCI----DAAGSL--VVYAPVDTPAMHVVMNGGDSAYVALLPSGFAIVP--DG 718

Query: 572 KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMA 631
             +  P  T            G    NN         S++T+AF+    S     +   +
Sbjct: 719 PGSRDPPST-----------NGGPTANNVGGQERVSGSLLTVAFQILVNSLPTAKLTVES 767

Query: 632 RQYVRSIIS-SVQRVALAL 649
            + V ++IS +VQ++  AL
Sbjct: 768 VETVNNLISCTVQKIKAAL 786



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREK- 74
           +Y R+TP+Q++ LE L+ ECP P   +R +L R  C     +E +Q+K WFQNRR + K 
Sbjct: 89  RYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLC-----LETRQVKFWFQNRRTQMKT 143

Query: 75  --QRKEASRLQAVNRKLTAMN 93
             +R E S L+  N KL A N
Sbjct: 144 QLERHENSLLRQDNDKLRAEN 164


>gi|449468346|ref|XP_004151882.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Cucumis
           sativus]
          Length = 764

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 134/348 (38%), Gaps = 73/348 (20%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DG+ VV + SL +++  P        VR    PSG LI+    
Sbjct: 412 LVPTRESYYVRYCKQHGDGTWVVVDVSLDDLRPTPG-------VRCRRRPSGCLIQEMPN 464

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEVTQSS 354
           G S +  V+H++++   V  + + L  S      K  +  L     R    MA  +    
Sbjct: 465 GYSKVTWVEHVEVDDRGVHNLYKQLVSSGQAFGAKRWVTTLDRQCERLASAMATNIPTGD 524

Query: 355 V----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
           V    N  GR+  ++  L++R+   F   V+  T   WT +   G DDV V+   S D  
Sbjct: 525 VGVITNQEGRK--SMLKLAERMVISFCAGVSASTTHTWTTLSGTGADDVRVMTRKSIDD- 581

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P   + ++ + A+     VPP  +  FLR+   RSEW     D+ S   
Sbjct: 582 -----------PGRPHGIVLSAATSFWLPVPPKRIFDFLRDENSRSEW-----DILSNGG 625

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
                              V+  +AH     +    + L  V  +        +M +LQ 
Sbjct: 626 -------------------VVQEMAHIANGRDTGNCVSLLRVNSANSSQ---SNMLILQ- 662

Query: 529 CSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
               +     T + +I+AP+D             D   LLPSGF I+P
Sbjct: 663 ----ESCTDPTASFVIYAPVDVVAMNLVLNGGDPDYVALLPSGFAILP 706



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 102 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 157

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E ++L+  N KL A N
Sbjct: 158 HERHENTQLRTENEKLRADN 177


>gi|242072556|ref|XP_002446214.1| hypothetical protein SORBIDRAFT_06g004510 [Sorghum bicolor]
 gi|241937397|gb|EES10542.1| hypothetical protein SORBIDRAFT_06g004510 [Sorghum bicolor]
          Length = 735

 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 161/740 (21%), Positives = 281/740 (37%), Gaps = 164/740 (22%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---- 75
           R+   Q++ LE  +  C  P+   RQ+L  +      +E +Q+K WFQNRR + K     
Sbjct: 52  RFAMHQIQELEAQFRVCSHPNPDVRQELATKI----GLEERQVKFWFQNRRSQMKASLDL 107

Query: 76  -----------------------------RKEASRLQAVNRKLTAMNK------------ 94
                                        R+E ++L+A N +L    +            
Sbjct: 108 TTILILLCRLFWLLCLSLVKAYGDDNKGIRQELAKLKAENEELKQRRQNPICFMCTNPIA 167

Query: 95  LLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDAS 154
            +  EN RL    ++L  E    + H              S + S  HHL   H   D  
Sbjct: 168 AIQSENWRLLNDNTRLKDEYVRSKAHMDRLIREAAAEHPPSAMRSSDHHLASAHMNMDPV 227

Query: 155 P------------AGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGC 202
                        A L S A   + EF+  AT     WV     +       I+    G 
Sbjct: 228 ALTGNCRTTTNLEATLTSHAARAMKEFVMLATKGEPMWVLAKDGEKLNHQEYILQTFPGL 287

Query: 203 SGVAARACGLVGLEPTRVAEILKDRPRGSAI-LYALTTLAPARDFWL------------L 249
            G+  +  G V  E TR  +++K    G+A+ L ++ T     + W+            L
Sbjct: 288 LGLCPQ--GFVE-EATRETDMIK----GTAMDLVSILTDVMNVELWVQSPRLLNRSVKFL 340

Query: 250 RYTSVLEDGSLVVCERSLKNI----QNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIH 305
           R++ ++ +G   V + S+  I    Q G +     +     +LPSG L+    GG   + 
Sbjct: 341 RFSKMMANGRWAVVDVSVDGIYGVEQEGSS---TSYTTGCRLLPSGCLLEDMSGGYCKVT 397

Query: 306 IVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVT-------------- 351
            V H + +  +VP + RPL +S   L        LR L++  + +T              
Sbjct: 398 WVVHAEYDETTVPFLFRPLLQSGQALG---ACRWLRSLQKQCEYITVLPSSHVLPSSSSS 454

Query: 352 -QSSVNGWGRRPAALRALSQRLSRGFNEAVNG-------FTDEGWTVMGN-DGMDDVTVL 402
              S  G GRR  ++  L+ ++   F  AV+G        +   W ++ N +G + V   
Sbjct: 455 SAISTLGVGRR--SVMELAGQMMVSFYAAVSGPVIVPATSSVNEWRLVSNGNGTERVEAF 512

Query: 403 VNSSPDKLMGLNLS-FANGFPAVSNAVLCAKASMLLQNVPPAILLRFL--REHRSEWADN 459
           V     +L+  N +    G P+V+  VL A  ++ L   PP  +  +L   + R EW D 
Sbjct: 513 V-----RLVTWNCADIMPGEPSVT--VLSATTTVWLPGTPPLCVFEYLCDLQRRGEW-DT 564

Query: 460 NID---VYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
           ++D   V   +++   P  LPG+ V +    V+ P     +  E  +V+ L+        
Sbjct: 565 HVDAGEVKELSSVATSP-QLPGNNVVS----VLEPTTVVTDETESSKVLILQETS----- 614

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSS 576
                D+    +   + E +      L+   +D     +  +LPSGF I+P   GK  + 
Sbjct: 615 ----TDVSCFLVVYSLIEES------LMRGIMDGRERSNIFVLPSGFAILPDGHGKAHAD 664

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHV-ATMARQYV 635
                  A++    P  +R  N          S++++AF+     ++  ++  T A +  
Sbjct: 665 HT----AANSSNSAPIDSRNNN--------AGSIVSVAFQTLLPGNLSSNLDNTGAFEDA 712

Query: 636 R-SIISSVQRVALALSPSNI 654
           R  +  ++ ++  A+  SNI
Sbjct: 713 RLQVCHAITKIKAAVGASNI 732


>gi|27817987|dbj|BAC55751.1| putative DNA-directed RNA polymerase Iia [Oryza sativa Japonica
           Group]
          Length = 286

 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 4/52 (7%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 64
           L+ G Y    P +VEALER+Y +CPKP+S RRQQL+ ECPIL+NIEPKQIKV
Sbjct: 117 LEGGTY----PLEVEALERVYTDCPKPTSARRQQLLCECPILANIEPKQIKV 164


>gi|356543720|ref|XP_003540308.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 732

 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 95/423 (22%), Positives = 164/423 (38%), Gaps = 80/423 (18%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DG+  V + SL N++  P+        R    PSG LI+    
Sbjct: 374 LVPTRESYFVRYCKQHGDGTWAVVDVSLDNLRPSPS-------ARCRRRPSGCLIQEMPN 426

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSS---- 354
           G S +  V+H++++   V  + + L  S      K  +A L RQ  ++A  +  +     
Sbjct: 427 GYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWIANLDRQCERLASAMATNIPTVD 486

Query: 355 ----VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                N  GR+  ++  L++R+   F   V+  T   WT +   G DDV V+   S D  
Sbjct: 487 VGVITNPDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD- 543

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     ++ + A+     V P  +  FLR+   RSEW     D+ S   
Sbjct: 544 -----------PGRPPGIVLSAATSFWLPVSPKRVFEFLRDENSRSEW-----DILSNGG 587

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
                              V+  +AH     +    + L  V  +        +M +LQ 
Sbjct: 588 -------------------VVQEMAHIANGRDTGNCVSLLRVNSANSSQ---SNMLILQ- 624

Query: 529 CSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALE 588
               +  A  T + +I+AP+D               I+ ++       P+    L S   
Sbjct: 625 ----ESCADSTGSFVIYAPVD---------------IVAMNVVLNGGDPDYVALLPSGFA 665

Query: 589 IGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIIS-SVQRVAL 647
           I P G  A      +     S++T+AF+   +S     ++  +   V ++I+ +V+R+  
Sbjct: 666 ILPDGTTAHGGGIGDIGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKA 725

Query: 648 ALS 650
           ALS
Sbjct: 726 ALS 728



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 62  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 117

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E ++L+  N KL A N    E
Sbjct: 118 HERHENTQLRTENEKLRADNMRFRE 142


>gi|222640586|gb|EEE68718.1| hypothetical protein OsJ_27379 [Oryza sativa Japonica Group]
          Length = 230

 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 4/52 (7%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 64
           L+ G Y    P +VEALER+Y +CPKP+S RRQQL+ ECPIL+NIEPKQIKV
Sbjct: 125 LEGGTY----PLEVEALERVYTDCPKPTSARRQQLLCECPILANIEPKQIKV 172


>gi|15242290|ref|NP_200030.1| homeobox-leucine zipper protein HDG7 [Arabidopsis thaliana]
 gi|75180477|sp|Q9LTK3.1|HDG7_ARATH RecName: Full=Homeobox-leucine zipper protein HDG7; AltName:
           Full=HD-ZIP protein HDG7; AltName: Full=Homeodomain
           GLABRA 2-like protein 7; AltName: Full=Homeodomain
           transcription factor HDG7; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 7
 gi|8885530|dbj|BAA97460.1| homeodomain transcription factor-like [Arabidopsis thaliana]
 gi|332008796|gb|AED96179.1| homeobox-leucine zipper protein HDG7 [Arabidopsis thaliana]
          Length = 682

 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 146/630 (23%), Positives = 231/630 (36%), Gaps = 129/630 (20%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T  Q++ LE  + ECP P+  +R +L ++      +E KQIK WFQNRR + K   
Sbjct: 61  YHRHTSYQIQELESFFKECPHPNEKQRLELGKKL----TLESKQIKFWFQNRRTQMKTQL 116

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEEN--------------DRLQKQVSQLVYENGYFRQH 120
           +R E   L+  N KL   N  L E                  +  +  QL  EN   ++ 
Sbjct: 117 ERHENVILKQENEKLRLENSFLKESMRGSLCIDCGGAVIPGEVSFEQHQLRIENAKLKEE 176

Query: 121 TQST-TLATK----DTSCESVVTS--GQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKA 173
                 LA +      S E       G  HL   H     +    + +A E + E L  A
Sbjct: 177 LDRICALANRFIGGSISLEQPSNGGIGSQHLPIGHCVSGGTSLMFMDLAMEAMDELLKLA 236

Query: 174 TGTAVEW---VQMPGMK--PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILK--- 225
                 W    +   M   PG    G+V I+       + A     ++  + AE+ +   
Sbjct: 237 ELETSLWSSKSEKGSMNHFPGSRETGLVLIN-------SLALVETLMDTNKWAEMFECIV 289

Query: 226 -------------DRPRGSAILY------ALTTLAPARDFWLLRYTSVLEDGSLVVCERS 266
                        D  R  +IL        ++ L P +    LRY     DG   V + S
Sbjct: 290 AVASTLEVISNGSDGSRNGSILLMQAEFQVMSPLVPIKQKKFLRYCKQHGDGLWAVVDVS 349

Query: 267 LKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYE 326
             +I  G     ++ +  ++M PSG +I+    G S +  ++H + E      + +PL  
Sbjct: 350 Y-DINRGN--ENLKSYGGSKMFPSGCIIQDIGNGCSKVTWIEHSEYEESHTHSLYQPLLS 406

Query: 327 SSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNGWGRR-PAALRALSQRLSRGFNEAVNGFT 384
           SS  L     +A L RQ       ++     G       ++  L+QR+   F   +    
Sbjct: 407 SSVGLGATKWLATLQRQCESFTMLLSSEDHTGLSHAGTKSILKLAQRMKLNFYSGITASC 466

Query: 385 DEGW-TVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPA 443
              W  ++  +   D  +L   S +                S  VL A  S+ L  V   
Sbjct: 467 IHKWEKLLAENVGQDTRILTRKSLEP---------------SGIVLSAATSLWLP-VTQQ 510

Query: 444 ILLRFLREH--RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEF 501
            L  FL +   R++W     D+ S  A              +  + +++P       +E 
Sbjct: 511 RLFEFLCDGKCRNQW-----DILSNGA--------------SMENTLLVPKG----QQEG 547

Query: 502 MEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFAD 554
             V  L   G+   ++     M +LQ       N V + A +++AP+D        S  D
Sbjct: 548 SCVSLLRAAGNDQNES----SMLILQ----ETWNDV-SGALVVYAPVDIPSMNTVMSGGD 598

Query: 555 DA--PLLPSGFRIIPLDSGKETSSPNRTLD 582
            A   LLPSGF I+P   G  +SS     D
Sbjct: 599 SAYVALLPSGFSILP--DGSSSSSDQFDTD 626


>gi|224078678|ref|XP_002305602.1| predicted protein [Populus trichocarpa]
 gi|222848566|gb|EEE86113.1| predicted protein [Populus trichocarpa]
          Length = 725

 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 99/435 (22%), Positives = 175/435 (40%), Gaps = 98/435 (22%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           + P R+ + +RY     DG+  V + SL +++  P++       +    PSG LI+    
Sbjct: 367 IVPTRENYFVRYCKQHTDGTWAVVDVSLDSLR--PSL-----LSKCRRRPSGCLIQELPN 419

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNG- 357
           G S +  V+H++++  SV  + RPL  S      K  +  L RQ  ++A  +  +  +G 
Sbjct: 420 GYSKVVWVEHIEVDDRSVQNIYRPLVNSGLAFGAKRWVGTLDRQCERLASSMAINIPSGD 479

Query: 358 -------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                   GR+  ++  L++R+   F   V   T   WT +   G DDV V+   S D  
Sbjct: 480 LCVITTAEGRK--SMLKLAERMVMSFCTGVGASTAHAWTTLSATGSDDVRVMTRKSMDD- 536

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE--HRSEWADNNIDVYSAAA 468
                      P     ++ + A+     V    +  FLR+  HRSEW     D+ S   
Sbjct: 537 -----------PGRPPGIVLSAATSFWIPVQSKRMFDFLRDENHRSEW-----DILSN-- 578

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
                    G  V     Q +  +A+  +    + ++++     S  + ++     L + 
Sbjct: 579 ---------GGEV-----QEMAHIANGRDPGNCVSLLRVNSANSSQSNMLI-----LQES 619

Query: 529 CSGMDENAVGTCAELIFAPIDASFA---------DDAPLLPSGFRIIPLDSGKETSSPNR 579
           C+        T + +I+AP+D S           D   LLPSGF I+P   G  +     
Sbjct: 620 CTD------STGSYVIYAPVDISAMNIVLSGGDPDYVALLPSGFAILPDGPGYGS----- 668

Query: 580 TLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSII 639
               A  L++G  G               S++T+AF+   +S     ++  +   V S+I
Sbjct: 669 ----AGILDVGSGG---------------SLLTVAFQILVDSVPTAKLSLGSVATVNSLI 709

Query: 640 S-SVQRVALALSPSN 653
             +V+R+  A+   N
Sbjct: 710 KCTVERIKAAVMCDN 724



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 36/168 (21%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 60  RYHRHTQRQIQDMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 115

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E S            N +L  EN+RL+        EN  +++  ++ +      +C   
Sbjct: 116 HERSE-----------NSILKAENERLR-------VENNRYKEALRNASCP----NCGGP 153

Query: 137 VTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
              G+     QH          L I    L E + + +G A ++V  P
Sbjct: 154 AALGEMSFDEQH----------LRIENVRLREEIDRISGIAAKYVGKP 191


>gi|356550018|ref|XP_003543387.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 781

 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 95/423 (22%), Positives = 165/423 (39%), Gaps = 80/423 (18%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DG+  V + SL N++  P+        R    PSG LI+    
Sbjct: 423 LVPTRESYFVRYCKQHGDGTWAVVDVSLDNLRPSPS-------ARCRRRPSGCLIQEMPN 475

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSS---- 354
           G S +  V+H++++   V  + + L  S      K  +A L RQ  ++A  +  +     
Sbjct: 476 GYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNIPTVD 535

Query: 355 ----VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                N  GR+  ++  L++R+   F   V+  T   WT +   G DDV V+   S D  
Sbjct: 536 VGVITNQDGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDD- 592

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     ++ + A+     V P  +  FLR+   RSEW     D+ S   
Sbjct: 593 -----------PGRPPGIVLSAATSFWLPVSPKRVFEFLRDENSRSEW-----DILSNGG 636

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
                              V+  +AH     +    + L  V  +        +M +LQ 
Sbjct: 637 -------------------VVQEMAHIANGRDTGNCVSLLRVNSANSSQ---SNMLILQ- 673

Query: 529 CSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALE 588
               +  A  T + +I+AP+D               I+ ++       P+    L S   
Sbjct: 674 ----ESCADSTGSFVIYAPVD---------------IVAMNVVLNGGDPDYVALLPSGFA 714

Query: 589 IGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIIS-SVQRVAL 647
           I P G  A      ++    S++T+AF+   +S     ++  +   V ++I+ +V+R+  
Sbjct: 715 ILPDGTTAHGGGIGDTGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKA 774

Query: 648 ALS 650
           ALS
Sbjct: 775 ALS 777



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 111 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 166

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E ++L+  N KL A N    E
Sbjct: 167 HERHENTQLRTENEKLRADNMRFRE 191


>gi|197116175|dbj|BAG68845.1| homeodomain-containing transcription factor FWA [Turritis glabra]
          Length = 683

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 142/659 (21%), Positives = 244/659 (37%), Gaps = 158/659 (23%)

Query: 2   AMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQ 61
           AMSC +G+ G      + R+T  Q++ LE  Y     P+  +R +L +      N+E KQ
Sbjct: 29  AMSCDNGQDGERMRRSH-RHTAYQIQELENFYEHNSHPTEDQRYELGQRL----NMEAKQ 83

Query: 62  IKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQ----------------- 104
           +K WFQN+R + K  +E  RLQ  NR L   +  ++   D+L+                 
Sbjct: 84  VKFWFQNKRTQVKINRE--RLQ--NRALIENHDRMLGAQDKLRCAMLRSSCNICGRATNC 139

Query: 105 ----KQVSQLVYENGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLL- 159
                +V +L+ EN   ++     +    D S   V  S        +P R+A+P   L 
Sbjct: 140 GDVDYEVQKLMVENNRLKREIDPYSSFLYDPSRVQVSPSEPLPSCSSNPGRNATPQLDLG 199

Query: 160 ---SIAEETLTEFLSKATGTAVEWVQMPGMKPGP--------DSVGIVAISH-------- 200
              + A++ +++FL  A  TA++ + + G    P          V +V   +        
Sbjct: 200 CGSTSAKKEISKFLDLAN-TAMKELIVLGEPDCPFWTIDLRSKEVSLVYEKYRGVFNNII 258

Query: 201 ---GCSGVAARACGLVGLEPTRVAEILKDRPR---------------------------G 230
              GC   A+R  GLV +  + + + L D  +                           G
Sbjct: 259 KPPGCVVEASRDTGLVPMTSSTLVKTLMDTGKWVNVFASIVPVSSTHKVIRTGYGGVKSG 318

Query: 231 S-----AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRA 285
           S     A    ++ L P R    LRY   L+ G  VV + +          P    +  +
Sbjct: 319 SLQQIQAEFQVISPLVPKRQVTFLRYCKELKHGLWVVVDVT------PAEYPTFLSYGAS 372

Query: 286 EMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ 345
             LPSG +I     G S +  ++  +     + ++ +PL  S   L  K     L++   
Sbjct: 373 NRLPSGLIIEDIANGYSKVTWIEQAEYNESHIHQLYQPLIGSGIGLGAKRWFKTLQRYCG 432

Query: 346 MAQEVTQSSVN----GWGRRPAA-LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVT 400
               +T ++++    G   + A  L  L+QR++  +   + G + + W ++  + +    
Sbjct: 433 SLSTLTSTNLDQISPGLSAKGATELVKLAQRMTLKYYTGITGSSTDKWEIIQVENVAQNM 492

Query: 401 VLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE--HRSEWAD 458
           + +          NL+    +  +   VL A  S+    V    L  FL     R EW  
Sbjct: 493 IFMTRK-------NLNETGEYTGI---VLSAATSVWFP-VNQQTLFAFLSHPSFRHEW-- 539

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
              D+                            L H    EE +   K +G G+      
Sbjct: 540 ---DI----------------------------LTHNTSMEETIRFQKAKGHGNIISLLR 568

Query: 519 MPRD-MFLLQLCSGMDENAVGTCAELIFAPIDASF---------ADDAPLLPSGFRIIP 567
           + R+ M +LQ        AV     +++AP++ S          +D   LLPSGF I+P
Sbjct: 569 IIRNGMLVLQEVWNDASGAV-----VVYAPVETSSIEPVKRGENSDSVQLLPSGFSILP 622


>gi|255566373|ref|XP_002524172.1| homeobox protein, putative [Ricinus communis]
 gi|223536541|gb|EEF38187.1| homeobox protein, putative [Ricinus communis]
          Length = 731

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 166/435 (38%), Gaps = 92/435 (21%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           T L P R+ + +RY     +G+  V + SL N++  P         R    PSG LI+  
Sbjct: 369 TPLVPTRESYFVRYCKQHAEGTWAVVDVSLDNLRPSPA-------ARCRRRPSGCLIQEM 421

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSS-- 354
             G S +  ++H++++   V  + + L  S      K  +A L RQ  ++A  +  +   
Sbjct: 422 PNGYSQVTWIEHVEVDDRGVHSLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNIPT 481

Query: 355 ------VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
                  N  GR+  ++  L++R+   F   V+  T   WT +   G DDV V+   S D
Sbjct: 482 GEVGVITNQEGRK--SMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVD 539

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAA 468
                        P     ++ + A+     VPP  +  FLR+  S    N  D+ S   
Sbjct: 540 D------------PGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSR---NQWDILSNGG 584

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
                              V+  +AH     +    + L  V  +        +M +LQ 
Sbjct: 585 -------------------VVQEMAHIANGRDTGNCVSLLRVNSANSSQ---SNMLILQ- 621

Query: 529 CSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSPNR 579
               +     T + +I+AP+D             D   LLPSGF I+P            
Sbjct: 622 ----ESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP------------ 665

Query: 580 TLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSII 639
             D  +A   G  G           +   S++T+AF+   +S     ++  +   V ++I
Sbjct: 666 --DGTTAHGGGIGGESV--------SAGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLI 715

Query: 640 S-SVQRVALALSPSN 653
           + +V+R+  ALS  N
Sbjct: 716 ACTVERIKAALSCEN 730



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 63  RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 118

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E ++L+  N KL A N
Sbjct: 119 HERHENTQLRTENEKLRADN 138


>gi|302398859|gb|ADL36724.1| HD domain class transcription factor [Malus x domestica]
          Length = 761

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 138/651 (21%), Positives = 254/651 (39%), Gaps = 170/651 (26%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 110 YHRHTTEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 165

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS-- 132
           +R E S L+    K       L +E+  +++Q+++    N      ++  TL T++    
Sbjct: 166 ERHENSLLKGEMEK-------LRDESKAMREQINKACCPNCGTATTSRDATLTTEEQQLR 218

Query: 133 -----CESVVTSGQHHLTPQHPPRDASPA-----------------GLLSIAEETLTEFL 170
                 +S V   +  L  ++PP  +SP+                 G+  + E  + E +
Sbjct: 219 IENARLKSEVEKLRAALV-KYPPGTSSPSCSAGQDQENRSSLDFYTGIFGLEESRIMEIV 277

Query: 171 SKA------TGTAVEWVQMPGMKPGPD---------SVGIVAISHG---CSGVAARACGL 212
           ++A        TA E + +  ++ G +            I    +G    S  A+R  GL
Sbjct: 278 NQAMEELQKMATAGEPLWVRSVETGREILNYDEYIKEFNIEVPGNGRPKRSIEASRETGL 337

Query: 213 VGLEPTRVAEILKD----------------------------RPRGSAILYA-LTTLAP- 242
           V ++  R+ +   D                            R     +++A L  L P 
Sbjct: 338 VFVDLPRLVQSFMDVNQWKEMFPCMISKAATVDVINNGEGDDRNGAVQLMFAELQMLTPL 397

Query: 243 --ARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGG 300
              R+ + +R    L      + + S+  +++          V+    PSG +I     G
Sbjct: 398 VPTREVYFVRCCKQLSPEQWAIVDVSIDKVEDNIDA----SLVKCRKRPSGCIIEDKTNG 453

Query: 301 GSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEVTQSSV 355
              +  V+H++ +  ++  + R +  S      +  +A L     R +  MA  V     
Sbjct: 454 HCKVIWVEHLECQRSTIQTMYRTIVNSGLAFGARHWVATLQLQCERLVFFMATNVPMKDS 513

Query: 356 NG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV---NSSPD 408
            G     GR+  ++  L+QR++  F  A+   +   WT + +   DD+ +     ++ P 
Sbjct: 514 AGVATLAGRK--SILKLAQRMTASFCRAIGASSYHTWTKISSKTGDDIRIASRKNSNDPG 571

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
           + +G+              +LCA +S+ L  V P +L  FLR+   R+EW     D+   
Sbjct: 572 EPLGV--------------ILCAVSSVWLP-VSPYLLFDFLRDETRRNEW-----DIM-- 609

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
             +  GP            +Q I  L+   +    + +  ++   +S         M++L
Sbjct: 610 --LNGGP------------AQTIANLSKGQDRGNAVTIQSMKSKENS---------MWIL 646

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
           Q  C    E+ V      ++AP+D            A +  +LPSGF I+P
Sbjct: 647 QDTCINSYESMV------VYAPVDIPGMQSVMTGCDASNIAILPSGFSILP 691


>gi|357471231|ref|XP_003605900.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355506955|gb|AES88097.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 734

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 136/347 (39%), Gaps = 73/347 (21%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DG+  V + SL N++  P+        R    PSG LI+    
Sbjct: 370 LVPTRESYFVRYCKQHPDGTWAVVDVSLDNLRPSPSS-------RCRRRPSGCLIQEMPN 422

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSS---- 354
           G S +  V+H++++   V  + + L  +      K  +A L RQ  ++A  +  +     
Sbjct: 423 GYSKVTWVEHVEVDERGVHNLYKQLVNTGDAFGAKRWVATLDRQCERLASSMATNIPTVD 482

Query: 355 ----VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                N  GR+  ++  L++R+   F   V+  T   WT +   G DDV V+   S D  
Sbjct: 483 VGVITNQEGRK--SMLKLAERMVISFCGGVSASTAHTWTTLSGTGADDVRVMTRKSVDD- 539

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     ++ + A+     VPP  +  FLR    R+EW     D+ S   
Sbjct: 540 -----------PGRPPGIVLSAATSFWLPVPPTQVFEFLRNENSRTEW-----DILSNGG 583

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
                              V+  +AH     +    + L  V +SP  +    +M +LQ 
Sbjct: 584 -------------------VVQEMAHIANGRDTGNCVSLLRV-NSPNSS--QSNMLILQ- 620

Query: 529 CSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRII 566
               +     T + +I+AP+D             D   LLPSGF I+
Sbjct: 621 ----ESVTDATGSFVIYAPVDMVAMNVVLNGGDPDYVALLPSGFAIL 663



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 63  RYHRHTQHQIQEMESFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 118

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S+L+A N KL A N
Sbjct: 119 HERSENSQLRADNEKLRADN 138


>gi|162463494|ref|NP_001105493.1| outer cell layer1 [Zea mays]
 gi|5531484|emb|CAB51059.1| OCL1 homeobox protein [Zea mays]
          Length = 784

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 26/132 (19%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE L+ ECP P   +R +L +       ++P+Q+K WFQNRR R K +
Sbjct: 86  RYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL----GLDPRQVKFWFQNRRTRMKTQ 141

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  +S        SC S 
Sbjct: 142 LERHE-----------NALLKQENDKLRA-------ENMAIREAMRSPMCG----SCGSP 179

Query: 137 VTSGQHHLTPQH 148
              G+  L  QH
Sbjct: 180 AMLGEVSLEEQH 191



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 152/364 (41%), Gaps = 77/364 (21%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI---QNGPTMPPVQHFVRAEML 288
           A L  L+ L P R+   LR+   L +G+  V + S+  +    N  T     + +R   L
Sbjct: 410 AELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGN-IRCRRL 468

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG +++    G   +  V++ + +  SV ++ RPL  S      +  +A L RQ   +A
Sbjct: 469 PSGCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLA 528

Query: 348 QEVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM--- 396
             ++  +V+          G+R  ++  L++R++  F   V+  +   W+ +  DG    
Sbjct: 529 ILMSPDTVSANDSSVITQEGKR--SMLKLARRMTENFCAGVSASSAREWSKL--DGAAGS 584

Query: 397 --DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH-- 452
             +DV V+   S D+          G P     VL A+ S+ +  V P  L  FLR+   
Sbjct: 585 IGEDVRVMARKSVDE---------PGEPP--GVVLSARTSVWVP-VAPEKLFNFLRDEQL 632

Query: 453 RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGH 512
           R+EW     D+ S      GP             Q +  +A   EH   + +++   +  
Sbjct: 633 RAEW-----DILSNG----GPM------------QEMANIAKGQEHGNSVSLLRASAMSA 671

Query: 513 SPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGF 563
           +    ++     L + C+    +A G+   +++AP+D            +    LLPSGF
Sbjct: 672 NQSSMLI-----LQETCT----DASGSM--VVYAPVDIPAMQLVMNGGDSTYVALLPSGF 720

Query: 564 RIIP 567
            I+P
Sbjct: 721 AILP 724


>gi|242080491|ref|XP_002445014.1| hypothetical protein SORBIDRAFT_07g002780 [Sorghum bicolor]
 gi|18481701|gb|AAL73523.1|AF466200_2 OCL5 protein [Sorghum bicolor]
 gi|241941364|gb|EES14509.1| hypothetical protein SORBIDRAFT_07g002780 [Sorghum bicolor]
          Length = 803

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 136/356 (38%), Gaps = 81/356 (22%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+   LRY     DGS  V + S++ ++        Q   R    PSG LI+    
Sbjct: 416 LVPTRESQFLRYCKQHTDGSWAVVDVSVEGLRASG-----QAGARGRRRPSGCLIQEMPN 470

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNG- 357
           G S +  V+H++ +   V ++ RPL  S      +   AAL RQ  ++A  +      G 
Sbjct: 471 GYSRVTWVEHVEADDMMVHDLYRPLVCSGLAFGARRWAAALERQCERLASAMASGVPAGP 530

Query: 358 -------------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
                         GRR  ++  L++R+   F   V   T   WT +   G +DV V+  
Sbjct: 531 SSGGDAVGVVTSVEGRR--SMLRLAERMVTSFCGGVTASTTHQWTKLSGSGAEDVRVMTR 588

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWA--DNN 460
            S D             P     ++   A+     VPPA +  FLR+   RSEW    N 
Sbjct: 589 KSVDD------------PGRPPGIILNAATSFWLPVPPARVFGFLRDDATRSEWDILSNG 636

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            DV   A I                       A+  +H   + ++++     +  +    
Sbjct: 637 GDVQEMAHI-----------------------ANGRDHGNAVSLLRVNNANSNQSN---- 669

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
             M +LQ C     +A G+   +I+AP+D             D   LLPSGF I+P
Sbjct: 670 --MLILQECC---TDATGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 718



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR---E 73
           +Y R+T  Q++ LE  + E P P   +R++L RE      +EP Q+K WFQN+R +   +
Sbjct: 102 RYHRHTQHQIQELEAFFKEYPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 157

Query: 74  KQRKEASRLQAVNRKLTAMN 93
           ++R E  +L+A N KL A N
Sbjct: 158 QERHENMQLRAENEKLRAEN 177


>gi|109729928|tpg|DAA05778.1| TPA_inf: class IV HD-Zip protein HDZ44 [Physcomitrella patens]
          Length = 809

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP Q++ +E ++ ECP P   +RQQL ++      + P+Q+K WFQNRR + K  
Sbjct: 118 RYHRHTPRQIQEMEMIFKECPHPDDKQRQQLSKDL----GLAPRQVKFWFQNRRTQMKAQ 173

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E S L+A N K+ A N ++ E
Sbjct: 174 TERAENSLLRAENEKVRAENVIMRE 198



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 172/439 (39%), Gaps = 83/439 (18%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+ + LRY     +G   V + S++++++ P  PP    +R    PSG
Sbjct: 428 AELQVLSPLVPTREVYFLRYCKQHAEGVWGVVDVSVESLRDNP--PP--SLMRCRRRPSG 483

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----M 346
            LI+    G + +  V+H + +  +V  + + L  S      +  +A L RQ  +    +
Sbjct: 484 VLIQDTPNGYARVTCVEHAEYDDRAVHRMYKELVGSGMAFGAQRWVATLERQCERVASLL 543

Query: 347 AQEVTQSSVNGW----GRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           A  +    + G     GRR  ++  L+QR++  F   V+  T   WT +   G DDV V+
Sbjct: 544 ASNIAPRDLGGVPSASGRR--SMLKLAQRMTSNFCAGVSASTAHTWTTLSGSGDDDVRVM 601

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
              S D             P     ++ + A+ +   V  A +  FLR+   RSEW    
Sbjct: 602 TRKSVDN------------PGEPQGIVLSAATSMWLAVSAARVFEFLRDERLRSEW---- 645

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            D+ S   +                   +  +AH  +  +    + L  V     +    
Sbjct: 646 -DILSNGGM-------------------VTEMAHIAKGRDPGNSVSLLKVNAMNANNSN- 684

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPIDA-------SFADDA--PLLPSGFRIIPLDSG 571
             + L + C+ +  + V      I+AP+D           D A   LLPSGF I+P   G
Sbjct: 685 -MLILQESCTDVSGSLV------IYAPVDIPAMNLVLQGGDPAYVALLPSGFAILPDGPG 737

Query: 572 KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMA 631
               S           E G    R             S++T+AF+    S     ++  +
Sbjct: 738 GGERSGCGGEQAGQGAESGRGAGRG------------SLVTVAFQILVSSVPSARLSLES 785

Query: 632 RQYVRSIIS-SVQRVALAL 649
              V ++IS +VQR+  AL
Sbjct: 786 VATVNNLISCTVQRIRAAL 804


>gi|357453445|ref|XP_003596999.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355486047|gb|AES67250.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 787

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 142/371 (38%), Gaps = 88/371 (23%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           +A L   + L P R+ + +RY     DG+  V + SL N++  P+        R+   PS
Sbjct: 406 TAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPS-------ARSRRRPS 458

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
           G LI+    G S +  V+H++++   V  + + L  S      K  +A L RQ  ++A  
Sbjct: 459 GCLIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWIATLDRQCERLASA 518

Query: 350 VTQSS---------------------VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW 388
           +  +                       N  GR+  ++  L++R+   F   V+  T   W
Sbjct: 519 MATNIPTVDMEFFMINEHYDIVMLVITNQDGRK--SMLKLAERMCISFCAGVSASTAHTW 576

Query: 389 TVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRF 448
           T +   G DDV V+   S D           G PA    VL A  S  L  VPP  +  F
Sbjct: 577 TTLSGTGADDVRVMTRKSVDD---------PGRPA--GIVLSAATSFWLP-VPPKRVFEF 624

Query: 449 LREH--RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIK 506
           LR+   RSEW     D+ S                      V+  +AH     +    + 
Sbjct: 625 LRDENSRSEW-----DILSNGG-------------------VVQEMAHIANGRDTGNCVS 660

Query: 507 LEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAE-LIFAPID---------ASFADDA 556
           L  V  +        +M +LQ      E+   T    +I+AP+D             D  
Sbjct: 661 LLRVNSANSSQ---SNMLILQ------ESCTDTTGSFVIYAPVDIVAMNVVLNGGDPDYV 711

Query: 557 PLLPSGFRIIP 567
            LLPSGF I+P
Sbjct: 712 ALLPSGFAILP 722



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR---E 73
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R +   +
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 162

Query: 74  KQRKEASRLQAVNRKLTAMNKLLME 98
           ++R E + L+  N KL A N    E
Sbjct: 163 QERHENTSLRTENEKLRADNMRFRE 187


>gi|242054643|ref|XP_002456467.1| hypothetical protein SORBIDRAFT_03g036820 [Sorghum bicolor]
 gi|241928442|gb|EES01587.1| hypothetical protein SORBIDRAFT_03g036820 [Sorghum bicolor]
          Length = 760

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 108/505 (21%), Positives = 183/505 (36%), Gaps = 129/505 (25%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---R 76
           R T +Q+E LE  +  C  P   +R+QL     +L +    Q+K WFQN+R + K    R
Sbjct: 115 RVTSQQLETLEGFFSICAHPDDNQRRQLSESTGLLLH----QVKFWFQNKRTQVKHLNGR 170

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQK----------------QVSQLVYENGYFRQH 120
           +E       N KL   N+ L EEN+RL++                   +L+ E    R  
Sbjct: 171 EE-------NYKLKVENETLKEENNRLKQLQNNIIAPAPCAKCIIDPGRLLLEKEVERLK 223

Query: 121 TQSTTLATKDTSCESVVTS----------GQHHLTP--------QHPPRDASPAGLLSIA 162
             +  L  +    +S+             G  HL P        QH  +      L ++A
Sbjct: 224 ELNQMLQQELQLLKSMDDGIPPMAMDSAVGNFHLDPLLENIFVVQHDEQ-----MLANLA 278

Query: 163 EETLTEFLSKATGTAVEWVQMPGMK-------------PGPDSVGIVAISHGCSGVAARA 209
           +    E L  A  ++  W+ +PG               PG  S   + ++      A RA
Sbjct: 279 QNAAQELLILANPSSALWLNVPGGSFETLNMAAYTETFPGQMSADTITMNT----EATRA 334

Query: 210 CGLVGLEPTRVAEILKDRPRGSAILYALTT------------------------------ 239
             +V L+P  + E L D      +   L +                              
Sbjct: 335 SAVVMLDPKSLVEFLMDAESYGTMFPGLVSAAATTKVYSCPTGREECYDGAMQMMTVELV 394

Query: 240 ----LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIR 295
               L  AR    +R    LE G++ V + SL +              R   +PSG +I+
Sbjct: 395 FPSPLVAARKCTFVRCVKKLEQGAVAVVDVSLDD------------GARCRKMPSGLVIQ 442

Query: 296 PCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQ--EVTQS 353
           P       +  +DH+ ++     ++  P        A++   +  RQ  ++    +VT  
Sbjct: 443 PIRYNTCKVTAIDHVVVDGTITHDLFAPCLSGLLFGARRWLTSMARQCARIRDVFQVTNC 502

Query: 354 SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVLVNSSPDKLMG 412
           ++N   R    +  L+  L   F  +V  + ++ W      G + D+ ++  +       
Sbjct: 503 TLNVTSRGRKTIMKLADNLLASFTSSVTAYPEDAWNFQCGLGTEQDIKIMYKTQ------ 556

Query: 413 LNLSFANGFPAVSNAVLCAKASMLL 437
            N S ++G P    AV+CA AS L+
Sbjct: 557 -NESTSSGSPT---AVVCASASFLV 577


>gi|242056677|ref|XP_002457484.1| hypothetical protein SORBIDRAFT_03g008090 [Sorghum bicolor]
 gi|241929459|gb|EES02604.1| hypothetical protein SORBIDRAFT_03g008090 [Sorghum bicolor]
          Length = 815

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 36/168 (21%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE L+ ECP P   +R +L +       ++P+Q+K WFQNRR + K +
Sbjct: 109 RYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL----GLDPRQVKFWFQNRRTQMKTQ 164

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  +S        SC S 
Sbjct: 165 LERHE-----------NALLKQENDKLRA-------ENMAIREAMRSPMCG----SCGSP 202

Query: 137 VTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
              G+  L  QH          L I    L + LS+    A +++  P
Sbjct: 203 AMLGEVSLEEQH----------LCIENARLKDELSRVYALATKFLGKP 240



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 182/446 (40%), Gaps = 103/446 (23%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI---QNGPTMPPVQHFVRAEML 288
           A L  L+ L P R+   LR+   L +G+  V + S+  +   QN  T     + +R   L
Sbjct: 441 AELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDQNSATASNAGN-IRCRRL 499

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG +++    G   +  V+H + +  SV ++ RPL  S      +  +A L RQ   +A
Sbjct: 500 PSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLAMLQRQCECLA 559

Query: 348 QEVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM----GNDG 395
             ++  +V+          G+R  ++  L++R++  F   V+  +   W+ +    G+ G
Sbjct: 560 ILMSPDTVSANDSSVITQEGKR--SMLKLARRMTENFCAGVSASSAREWSKLDGAAGSIG 617

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--R 453
            +DV V+   S D+            P     V+ + A+ +   V P  L  FLR+   R
Sbjct: 618 -EDVRVMARKSVDE------------PGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLR 664

Query: 454 SEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHS 513
           +EW     D+ S      GP             Q +  +A   EH   + +++   +  +
Sbjct: 665 AEW-----DILSNG----GPM------------QEMANIAKGQEHGNSVSLLRASAMSAN 703

Query: 514 PEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFR 564
               ++     L + C+    +A G+   +++AP+D            +    LLPSGF 
Sbjct: 704 QSSMLI-----LQETCT----DASGSM--VVYAPVDIPAMQLVMNGGDSTYVALLPSGFA 752

Query: 565 IIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQ 624
           I+P                      GP+G  A +          S++T+AF+    S   
Sbjct: 753 ILP---------------------DGPSGVGAEHKTGG------SLLTVAFQILVNSQPT 785

Query: 625 EHVATMARQYVRSIIS-SVQRVALAL 649
             +   + + V ++IS +++++  AL
Sbjct: 786 AKLTVESVETVNNLISCTIKKIKTAL 811


>gi|356505007|ref|XP_003521284.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 835

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 102/441 (23%), Positives = 173/441 (39%), Gaps = 81/441 (18%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+     +G   V + S+ +I+     P    FV    LPSG
Sbjct: 449 AELQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSIDSIRESSGAPT---FVNGRRLPSG 505

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ--------L 343
            +++    G S +  V+H + E   V ++ RPL  S      +  +A L++        +
Sbjct: 506 CVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILM 565

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM--DDVTV 401
              A     S++   GRR  ++  L+QR++  F   V   T   W  +       +DV V
Sbjct: 566 SSAAPSRDHSAITAGGRR--SMVKLAQRMTNNFCAGVCASTVHKWNKLNAAANVDEDVRV 623

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S D             P     ++ + A+ +   V P  L  FLR+   RSEW   
Sbjct: 624 MTRKSVDD------------PGEPPGIVLSAATSVWLPVSPHRLFDFLRDERLRSEW--- 668

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S      GP             Q +  +A   +H   + +++   +  +      
Sbjct: 669 --DILSNG----GPM------------QEMAHIAKGQDHGNAVSLLRASAINSNQS---- 706

Query: 520 PRDMFLLQLCSGMDENAVGTCAEL-IFAPID-------ASFADDA--PLLPSGFRIIPLD 569
              M +LQ      E  +     L ++AP+D        +  D A   LLPSGF I+P  
Sbjct: 707 --SMLILQ------ETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP-- 756

Query: 570 SGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVAT 629
            G  +  P++    +S       G+      S       S++T+AF+    S     +  
Sbjct: 757 DGPGSRGPHQNGPTSSTTTTTNGGDNGVTRVSG------SLLTVAFQILVNSLPTAKLTV 810

Query: 630 MARQYVRSIIS-SVQRVALAL 649
            + + V ++IS +VQ++  AL
Sbjct: 811 ESVETVNNLISCTVQKIKAAL 831



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREK- 74
           +Y R+TP+Q++ LE L+ ECP P   +R +L R  C     +E +Q+K WFQNRR + K 
Sbjct: 135 RYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLC-----LETRQVKFWFQNRRTQMKT 189

Query: 75  --QRKEASRLQAVNRKLTAMN 93
             +R E + L+  N KL A N
Sbjct: 190 QLERHENTLLRQENDKLRAEN 210


>gi|296089063|emb|CBI38766.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 180/440 (40%), Gaps = 88/440 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+     +G   V + S+  I+     P    FV    LPSG
Sbjct: 394 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSVAPT---FVNCRRLPSG 450

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEV 350
            +++    G S +  V+H + +  +V ++ RPL  S      +  +A L RQ   +A  +
Sbjct: 451 CVVQDMPNGYSKVTWVEHAEYDESAVHQLYRPLLGSGMGFGAQRWVATLQRQCECLAILM 510

Query: 351 TQS--------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           + +        ++   GRR  ++  L+QR++  F   V   T   W  +    +D DV V
Sbjct: 511 SSTVPTRDHTAAITAGGRR--SMLKLAQRMTDNFCAGVCASTVHKWNKLCAGNVDEDVRV 568

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S D             P     ++ + A+ +   V P  L  FLR+   RSEW   
Sbjct: 569 MTRKSVDD------------PGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEW--- 613

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S      GP               +  +AH  + ++    + L  +  S  +A  
Sbjct: 614 --DILSNG----GP---------------MQEMAHIAKGQDHGNCVSL--LRASAMNANQ 650

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLDS 570
              + L + C     +A G+   +++AP+D        +  D A   LLPSGF I+P   
Sbjct: 651 SSMLILQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP--D 702

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
           G  +  PN  +   S    GP  NR +           S++T+AF+    S     +   
Sbjct: 703 GPGSRGPNSGVHTNSG---GP--NRVSG----------SLLTVAFQILVNSLPTAKLTVE 747

Query: 631 ARQYVRSIIS-SVQRVALAL 649
           + + V ++IS +VQ++  AL
Sbjct: 748 SVETVNNLISCTVQKIKAAL 767



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE L+ ECP P   +R +L R      ++E +Q+K WFQNRR + K  
Sbjct: 115 RYHRHTPQQIQELEALFKECPHPDEKQRLELSRRL----SLETRQVKFWFQNRRTQMKTQ 170

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S L+  N KL A N
Sbjct: 171 LERHENSILRQENDKLRAEN 190


>gi|67966273|emb|CAG38614.1| homeobox protein OCL1 [Zea mays]
          Length = 803

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 26/132 (19%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE L+ ECP P   +R +L +       ++P+Q+K WFQNRR + K +
Sbjct: 105 RYHRHTPQQIQELEALFKECPHPDEKQRDELSKRL----GLDPRQVKFWFQNRRTQMKTQ 160

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  +S        SC S 
Sbjct: 161 LERHE-----------NALLKQENDKLRA-------ENMAIREAMRSPMCG----SCGSP 198

Query: 137 VTSGQHHLTPQH 148
              G+  L  QH
Sbjct: 199 AMLGEVSLEEQH 210



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 81/363 (22%), Positives = 150/363 (41%), Gaps = 75/363 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI---QNGPTMPPVQHFVRAEML 288
           A L  L+ L P R+   LR+   L +G+  V + S+  +    N  T     + +R   L
Sbjct: 429 AELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGN-IRCRRL 487

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG +++    G   +  V++ + +  SV ++ RPL  S      +  +A L RQ   +A
Sbjct: 488 PSGCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLA 547

Query: 348 QEVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM----GNDG 395
             ++  +V+          G+R  ++  L++R++  F   V+  +   W+ +    G+ G
Sbjct: 548 ILMSPDTVSANDSSVITQEGKR--SMLKLARRMTENFCAGVSASSAREWSKLDGAAGSIG 605

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--R 453
            +DV V+   S D+            P     V+ +  + +   V P  L  FLR+   R
Sbjct: 606 -EDVRVMARKSVDE------------PGEPPGVVLSAPTSVWVPVAPEKLFNFLRDEQLR 652

Query: 454 SEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHS 513
           +EW     D+ S      GP             Q +  +A   EH   + +++   +  +
Sbjct: 653 AEW-----DILSNG----GPM------------QEMANIAKGQEHGNSVSLLRASAMSAN 691

Query: 514 PEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFR 564
               ++     L + C+    +A G+   +++AP+D            +    LLPSGF 
Sbjct: 692 QSSMLI-----LQETCT----DASGSM--VVYAPVDIPAMQLVMNGGDSTYVALLPSGFA 740

Query: 565 IIP 567
           I+P
Sbjct: 741 ILP 743


>gi|359489358|ref|XP_002272264.2| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Vitis
           vinifera]
          Length = 811

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 180/440 (40%), Gaps = 88/440 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+     +G   V + S+  I+     P    FV    LPSG
Sbjct: 434 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSVAPT---FVNCRRLPSG 490

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEV 350
            +++    G S +  V+H + +  +V ++ RPL  S      +  +A L RQ   +A  +
Sbjct: 491 CVVQDMPNGYSKVTWVEHAEYDESAVHQLYRPLLGSGMGFGAQRWVATLQRQCECLAILM 550

Query: 351 TQS--------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           + +        ++   GRR  ++  L+QR++  F   V   T   W  +    +D DV V
Sbjct: 551 SSTVPTRDHTAAITAGGRR--SMLKLAQRMTDNFCAGVCASTVHKWNKLCAGNVDEDVRV 608

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S D             P     ++ + A+ +   V P  L  FLR+   RSEW   
Sbjct: 609 MTRKSVDD------------PGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEW--- 653

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S      GP               +  +AH  + ++    + L  +  S  +A  
Sbjct: 654 --DILSNG----GP---------------MQEMAHIAKGQDHGNCVSL--LRASAMNANQ 690

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLDS 570
              + L + C     +A G+   +++AP+D        +  D A   LLPSGF I+P   
Sbjct: 691 SSMLILQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP--D 742

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
           G  +  PN  +   S    GP  NR +           S++T+AF+    S     +   
Sbjct: 743 GPGSRGPNSGVHTNSG---GP--NRVSG----------SLLTVAFQILVNSLPTAKLTVE 787

Query: 631 ARQYVRSIIS-SVQRVALAL 649
           + + V ++IS +VQ++  AL
Sbjct: 788 SVETVNNLISCTVQKIKAAL 807



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE L+ ECP P   +R +L R      ++E +Q+K WFQNRR + K  
Sbjct: 115 RYHRHTPQQIQELEALFKECPHPDEKQRLELSRRL----SLETRQVKFWFQNRRTQMKTQ 170

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S L+  N KL A N
Sbjct: 171 LERHENSILRQENDKLRAEN 190


>gi|222639874|gb|EEE68006.1| hypothetical protein OsJ_25963 [Oryza sativa Japonica Group]
          Length = 785

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 136/360 (37%), Gaps = 72/360 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ---NGPTMPPVQHFVRAEM 287
           SA     + L P R+   LRY     DG+  V + SL  ++    G   P      R   
Sbjct: 411 SAEFQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR- 469

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQ 342
            PSG LI+    G S +  V+H++ +   V  + +P+  S      +  +A L     R 
Sbjct: 470 -PSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERL 528

Query: 343 LRQMAQEVTQSSVNGW-----GRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
              MA  V  S   G      GRR  ++  L++R+   F   V   T   WT +   G +
Sbjct: 529 ASAMASNVASSGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAE 586

Query: 398 DVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSE 455
           DV V+   S D             P     ++   A+     VPP+ +  FLR+   RSE
Sbjct: 587 DVRVMTRKSVDD------------PGRPPGIILNAATSFWLPVPPSRVFDFLRDDSTRSE 634

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           W     D+ S                      V+  +AH     +    + L  V ++  
Sbjct: 635 W-----DILSNGG-------------------VVQEMAHIANGRDHGNAVSLLRVNNANS 670

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRII 566
           +     +M +LQ C     +A G+   +I+AP+D             D   LLPSGF I+
Sbjct: 671 NQ---SNMLILQECC---TDATGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 722



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 127 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 182

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+A N KL A N    E
Sbjct: 183 HERHENNALRAENEKLRAENMRYKE 207


>gi|413939125|gb|AFW73676.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 735

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 20  RYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWFQNRRTQMKAQ 75

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R++   L+A N K+   N  + E
Sbjct: 76  HERQDNCFLRAENDKIRCENIAMQE 100



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 175/454 (38%), Gaps = 115/454 (25%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM--PPVQHFVRAEMLPSG 291
           L+ ++ + P R+F  LRY   +E G   + + S+   Q       PP     R+  LPSG
Sbjct: 356 LHVMSPVVPTREFCFLRYCRQIEHGLWAIADISVDQQQRDARFGAPPS----RSCRLPSG 411

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVL--RPLYESSTVLAQKTTMAALRQL------ 343
            LI     G S +  V+HM++E   VP  L  R L  S         +AAL++       
Sbjct: 412 CLIADMADGSSKVTWVEHMEIED-RVPIHLLYRDLVLSGAAFGAHRWLAALQRACERCAC 470

Query: 344 ---------RQMAQEVTQS-----SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT 389
                    R +A     S     +V   G+R  ++  LSQR+   F  +++      WT
Sbjct: 471 LATAGIMPHRDIAAAGDISHRELLAVTPEGKR--SMMKLSQRMVNSFCASLSASQLHRWT 528

Query: 390 VMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFL 449
            +       V V+V+ S D             P   + V+ + A+ +   VP      F+
Sbjct: 529 TLSGPNDVGVRVMVHRSTD-------------PGQPSGVVLSAATSIWLPVPCDRAFAFV 575

Query: 450 R-EH-RSEWADNNIDVYSAAAIKVGPCSLP-GSRVGTFGSQVILPLAHTIEHEEFMEVIK 506
           R EH RS+W     DV S          +P GS  G                     +  
Sbjct: 576 RDEHTRSQW-----DVLSHGNPVQEVSRIPNGSHPGNC-------------------ISL 611

Query: 507 LEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAP 557
           L G+  S    ++     L + C+    +A G+   +++APID   A+           P
Sbjct: 612 LRGLNASQNSMLI-----LQESCT----DASGSL--VVYAPIDIPAANVVMSGEDPSAIP 660

Query: 558 LLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEF 617
           LLPSGF I+P   G+  +S +R     SA                      S++T+AF+ 
Sbjct: 661 LLPSGFSILP--DGRPGASSSRAGQAPSA---------------------GSLVTVAFQI 697

Query: 618 AFESHMQEHVATMARQYVRSIIS-SVQRVALALS 650
              S     +   +   V S+IS +V+++  AL+
Sbjct: 698 LVSSLPSAKLNAESVATVNSLISTTVEQIKAALN 731


>gi|356532068|ref|XP_003534596.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 820

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 180/440 (40%), Gaps = 94/440 (21%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+     +G   V + S+  I++    P    FV    LPSG
Sbjct: 449 AELQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSIDTIRDTSGAPT---FVNCRRLPSG 505

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEV 350
            +++    G S +  V+H + +   + ++ RPL  S      +  +A L RQ   +A  +
Sbjct: 506 CVVQDMPNGYSKVTWVEHAEYDESQIHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILI 565

Query: 351 T-------QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM--GNDGMDDVTV 401
           +        S+++  GRR  ++  L+QR++  F   V   T   W  +  GN G +DV V
Sbjct: 566 SSAVPSREHSAISSGGRR--SMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVG-EDVRV 622

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S D             P     ++ + A+ +   V P  L  FLR+   RSEW   
Sbjct: 623 MTRKSVDD------------PGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEW--- 667

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S      GP             Q +  +A   +H   + +++   +     +A  
Sbjct: 668 --DILSNG----GPM------------QEMAHIAKGQDHANCVSLLRASAI-----NANQ 704

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLDS 570
              + L + C+    +A G+   +++AP+D        +  D A   LLPSGF I+P  S
Sbjct: 705 SSMLILQETCT----DASGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGS 758

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
            +E                      A+   + +  C+   +T+AF+    S     +   
Sbjct: 759 VEENGG-------------------ASQQRAASGGCL---LTVAFQILVNSLPTAKLTVE 796

Query: 631 ARQYVRSIIS-SVQRVALAL 649
           + + V ++IS +VQ++  AL
Sbjct: 797 SVETVNNLISCTVQKIKSAL 816



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE L+ ECP P   +R +L R      N+E +Q+K WFQNRR + K  
Sbjct: 121 RYHRHTPQQIQELESLFKECPHPDEKQRLELSRRL----NLETRQVKFWFQNRRTQMKTQ 176

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E S L+  N KL A N  + E
Sbjct: 177 LERHENSLLRQENDKLRAENMSMRE 201


>gi|187611406|sp|A3BPF2.1|ROC7_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC7; AltName:
           Full=GLABRA 2-like homeobox protein 7; AltName:
           Full=HD-ZIP protein ROC7; AltName: Full=Homeodomain
           transcription factor ROC7; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 7
          Length = 749

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 136/360 (37%), Gaps = 72/360 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ---NGPTMPPVQHFVRAEM 287
           SA     + L P R+   LRY     DG+  V + SL  ++    G   P      R   
Sbjct: 375 SAEFQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR- 433

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQ 342
            PSG LI+    G S +  V+H++ +   V  + +P+  S      +  +A L     R 
Sbjct: 434 -PSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERL 492

Query: 343 LRQMAQEVTQSSVNG-----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
              MA  V  S   G      GRR  ++  L++R+   F   V   T   WT +   G +
Sbjct: 493 ASAMASNVASSGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAE 550

Query: 398 DVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSE 455
           DV V+   S D             P     ++   A+     VPP+ +  FLR+   RSE
Sbjct: 551 DVRVMTRKSVDD------------PGRPPGIILNAATSFWLPVPPSRVFDFLRDDSTRSE 598

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           W     D+ S                      V+  +AH     +    + L  V ++  
Sbjct: 599 W-----DILSNGG-------------------VVQEMAHIANGRDHGNAVSLLRVNNANS 634

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRII 566
           +     +M +LQ C     +A G+   +I+AP+D             D   LLPSGF I+
Sbjct: 635 NQ---SNMLILQECC---TDATGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 686



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 91  RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 146

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E + L+A N KL A N
Sbjct: 147 HERHENNALRAENEKLRAEN 166


>gi|325260819|gb|ADZ04638.1| hypothetical protein [Oryza glaberrima]
          Length = 778

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 136/360 (37%), Gaps = 72/360 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ---NGPTMPPVQHFVRAEM 287
           SA     + L P R+   LRY     DG+  V + SL  ++    G   P      R   
Sbjct: 404 SAEFQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR- 462

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQ 342
            PSG LI+    G S +  V+H++ +   V  + +P+  S      +  +A L     R 
Sbjct: 463 -PSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERL 521

Query: 343 LRQMAQEVTQSSVNGW-----GRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
              MA  V  S   G      GRR  ++  L++R+   F   V   T   WT +   G +
Sbjct: 522 ASAMASNVASSGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAE 579

Query: 398 DVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSE 455
           DV V+   S D             P     ++   A+     VPP+ +  FLR+   RSE
Sbjct: 580 DVRVMTRKSVDD------------PGRPPGIILNAATSFWLPVPPSRVFDFLRDDSTRSE 627

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           W     D+ S                      V+  +AH     +    + L  V ++  
Sbjct: 628 W-----DILSNGG-------------------VVQEMAHIANGRDHGNAVSLLRVNNANS 663

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRII 566
           +     +M +LQ C     +A G+   +I+AP+D             D   LLPSGF I+
Sbjct: 664 NQ---SNMLILQECC---TDATGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 715



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 120 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 175

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+A N KL A N    E
Sbjct: 176 HERHENNALRAENEKLRAENMRYKE 200


>gi|357159535|ref|XP_003578477.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 3
           [Brachypodium distachyon]
          Length = 858

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 8/86 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 75
           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+E +Q+K WFQNRR + KQ 
Sbjct: 122 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKQT 177

Query: 76  ---RKEASRLQAVNRKLTAMNKLLME 98
              R E + L+  N KL A N  + E
Sbjct: 178 QIERHENALLRQENDKLRAENMTIRE 203



 Score = 46.6 bits (109), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 99/456 (21%), Positives = 175/456 (38%), Gaps = 74/456 (16%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI---QNGPTMPPVQHFVRAEML 288
           A L  L+ L P R+   LR+     +G   V + S   +     G        ++   +L
Sbjct: 439 AELQVLSPLVPIREVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAAAGYMGCRLL 498

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG ++     G + +  V H + +  +V  + RPL  S   L  +  +A+L RQ + +A
Sbjct: 499 PSGCVVEDMRNGYAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLASLQRQCQYLA 558

Query: 348 QEVTQS-------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW---------TVM 391
                S       +++  GRR  ++  L+QR++  F   V     + W           M
Sbjct: 559 ILRNNSLPSQDNQAISPVGRR--SMLKLAQRMADNFCAGVCATAAQKWRRLDEWRVEGAM 616

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAV-SNAVLCAKASMLLQNVPPAILLRFLR 450
              G            DK + +    + G P      VL A  S+ L   PP  +  +LR
Sbjct: 617 PGGGDQQQHQAGGGDGDKEVRMMARHSVGAPGEPPGVVLSATTSVRLPGTPPQRVFDYLR 676

Query: 451 EH--RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLE 508
           +   R EW     D+ +                     Q +  +A    H   + +++  
Sbjct: 677 DEQRRGEW-----DILANGEAM----------------QEMDHIAKGQLHGNAVSLLRPN 715

Query: 509 GVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAEL-IFAPIDA-------SFADDA--PL 558
               +        +M +LQ      E    +   L ++AP+D        +  D A   L
Sbjct: 716 ATSGNQN------NMLILQ------ETCTDSSGSLVVYAPVDVQSMHIVMNGGDSAYVSL 763

Query: 559 LPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFA 618
           LPSGF I+P   G  T  P   +D A + +    G+  +  +  N+T   S++T+AF+  
Sbjct: 764 LPSGFAILP--DGHNT-PPGAVVDPAGSSQQSQQGSSESAAHGNNNTG--SLVTVAFQIL 818

Query: 619 FESHMQEHVATMARQYVRSIIS-SVQRVALALSPSN 653
             +     +   +   V +++S ++Q++  AL  SN
Sbjct: 819 VNNLPTAKLTVESVDTVSNLLSCTIQKIKSALQASN 854


>gi|38636822|dbj|BAD03062.1| putative OCL5 protein [Oryza sativa Japonica Group]
 gi|46390804|dbj|BAD16310.1| putative OCL5 protein [Oryza sativa Japonica Group]
          Length = 828

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 133/351 (37%), Gaps = 72/351 (20%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ---NGPTMPPVQHFVRAEMLPSGYLIRP 296
           L P R+   LRY     DG+  V + SL  ++    G   P      R    PSG LI+ 
Sbjct: 463 LVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR--PSGCLIQE 520

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEVT 351
              G S +  V+H++ +   V  + +P+  S      +  +A L     R    MA  V 
Sbjct: 521 MPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVA 580

Query: 352 QSSVNGW-----GRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSS 406
            S   G      GRR  ++  L++R+   F   V   T   WT +   G +DV V+   S
Sbjct: 581 SSGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVMTRKS 638

Query: 407 PDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVY 464
            D             P     ++   A+     VPP+ +  FLR+   RSEW     D+ 
Sbjct: 639 VDD------------PGRPPGIILNAATSFWLPVPPSRVFDFLRDDSTRSEW-----DIL 681

Query: 465 SAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMF 524
           S                      V+  +AH     +    + L  V ++  +     +M 
Sbjct: 682 SNGG-------------------VVQEMAHIANGRDHGNAVSLLRVNNANSNQ---SNML 719

Query: 525 LLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRII 566
           +LQ C     +A G+   +I+AP+D             D   LLPSGF I+
Sbjct: 720 ILQECC---TDATGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 765



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 170 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 225

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E + L+A N KL A N
Sbjct: 226 HERHENNALRAENEKLRAEN 245


>gi|345195190|tpg|DAA34960.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414587876|tpg|DAA38447.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 750

 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 119/523 (22%), Positives = 201/523 (38%), Gaps = 93/523 (17%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 77
           R+T +Q++ LE  + +C  P    RQ+L  +      I  +Q+K WFQNRR + K R   
Sbjct: 68  RFTVQQLQQLESSFQKCSHPDDEMRQELAAKV----GISARQVKFWFQNRRSQIKVRSCG 123

Query: 78  -EASRLQAVNRKLTAMNKLLMEENDRLQ---------KQVSQLVYENGYFRQ-----HTQ 122
            E ++ +  N +L A N  L E+   +           Q  QL+ EN   R+       +
Sbjct: 124 TENNKYRRQNAELLATNMELKEQLKGMTCSRCDAPTIMQKWQLMDENAKLREMYSLASAE 183

Query: 123 STTLATKDTSCESVVTSGQHHLTPQHP-------------------------------PR 151
            T L  +     SV+      +T  +P                                R
Sbjct: 184 LTKLMQEANLPPSVILEDMALVTSMNPLSSNASSSRSTINQDELLSYVECAIKEFEMLVR 243

Query: 152 DASPAGLLSIAEETLT--EFLS----------KATGTAVEWVQMPGMKPG--PDSVGIVA 197
           D +P  L +I  + L   E+            +  G  VE  +   +  G  PD V I+ 
Sbjct: 244 DGTPLWLPTIGGDVLNSKEYACQRFPRLHGTIRPEGFVVEATRDTAIVKGSAPDIVDILT 303

Query: 198 ------ISHGCSGVAARACGLVGLEPTRVAEIL-KDRPRGSAILYALTTLAPARDFWLLR 250
                  +  C   A RA  ++   P     +L ++  + +  L   +   P R+   LR
Sbjct: 304 DVPRWYKAFPCIVAALRAYHVIFSGPFASGNVLIQELLQINVDLSVESPRPPLRNMKFLR 363

Query: 251 YTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHM 310
            T    +G  VV + S+ ++Q        QH  +  MLPSG LI+    G   +  + H 
Sbjct: 364 ITKQNANGDFVVVDVSINDVQGIHEQQGSQH--KHTMLPSGCLIKDKGDGYCQVTWIVHA 421

Query: 311 DLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ-----LRQMAQEVTQSSVNGWGRRPAA- 364
           + E  SVP + R  Y+S         +A+L++     + + + +V    V+G G    + 
Sbjct: 422 EYEEASVPPLFRQFYQSGLAFGASRWLASLQRHCEYMVVKHSIQVPTGCVSGSGVLTLSA 481

Query: 365 -----LRALSQRLSRGFNEAVNGF-TDEGWTVM---GNDGMDDVTVLVNSSPDKLMGLNL 415
                L  L+QR+   F +  +G  T E   ++   G   M     ++  +   ++G   
Sbjct: 482 LGRWNLLELAQRMMAIFYKTTSGLPTVEPGNIVTRWGRGCMGTTGEMLEPAVRMVLGNYF 541

Query: 416 SFANGFPAVSNAVLCAKASMLLQNVPPAILLRFL--REHRSEW 456
              +G P+    VL A  ++ L   PP  +  +L   + R EW
Sbjct: 542 GAMDGQPSPLQ-VLSATTTVWLPGTPPESVFNYLCNGQRRGEW 583


>gi|187611405|sp|A2YR02.1|ROC7_ORYSI RecName: Full=Homeobox-leucine zipper protein ROC7; AltName:
           Full=GLABRA 2-like homeobox protein 7; AltName:
           Full=HD-ZIP protein ROC7; AltName: Full=Homeodomain
           transcription factor ROC7; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 7
          Length = 749

 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 136/360 (37%), Gaps = 72/360 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ---NGPTMPPVQHFVRAEM 287
           SA     + L P R+   LRY     DG+  V + SL  ++    G   P      R   
Sbjct: 375 SAEFQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR- 433

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQ 342
            PSG LI+    G S +  V+H++ +   V  + +P+  S      +  +A L     R 
Sbjct: 434 -PSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERL 492

Query: 343 LRQMAQEVTQSSVNG-----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
              MA  V  S   G      GRR  ++  L++R+   F   V   T   WT +   G +
Sbjct: 493 ASAMASNVASSGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAE 550

Query: 398 DVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSE 455
           DV V+   S D             P     ++   A+     VPP+ +  FLR+   RSE
Sbjct: 551 DVRVMTRKSVDD------------PGRPPGIVLNAATSFWLPVPPSRVFDFLRDDSTRSE 598

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           W     D+ S                      V+  +AH     +    + L  V ++  
Sbjct: 599 W-----DILSNGG-------------------VVQEMAHIANGRDHGNAVSLLRVNNANS 634

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRII 566
           +     +M +LQ C     +A G+   +I+AP+D             D   LLPSGF I+
Sbjct: 635 NQ---SNMLILQECC---TDATGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 686



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 91  RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 146

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E + L+A N KL A N
Sbjct: 147 HERHENNALRAENEKLRAEN 166


>gi|345195196|tpg|DAA34963.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 692

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 20  RYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWFQNRRTQMKAQ 75

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R++   L+A N K+   N  + E
Sbjct: 76  HERQDNCFLRAENDKIRCENIAMQE 100



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 107/445 (24%), Positives = 175/445 (39%), Gaps = 106/445 (23%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM--PPVQHFVRAEMLPSG 291
           L+ ++ + P R+F  LRY   +E G   + + S+   Q       PP     R+  LPSG
Sbjct: 322 LHVMSPVVPTREFCFLRYCRQIEHGLWAIADISVDQQQRDARFGAPPS----RSCRLPSG 377

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVL--RPLYESSTVLAQKTTMAALRQLRQMA-- 347
            LI     G S +  V+HM++E   VP  L  R L  S         +AAL++  +    
Sbjct: 378 CLIADMADGSSKVTWVEHMEIED-RVPIHLLYRDLVLSGAAFGAHRWLAALQRACERCAC 436

Query: 348 ---------QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD 398
                    +++  + V   G+R  ++  LSQR+   F  +++      WT +       
Sbjct: 437 LATAGIMPHRDIAAAGVTPEGKR--SMMKLSQRMVNSFCASLSASQLHRWTTLSGPNDVG 494

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR-EH-RSEW 456
           V V+V+ S D             P   + V+ + A+ +   VP      F+R EH RS+W
Sbjct: 495 VRVMVHRSTD-------------PGQPSGVVLSAATSIWLPVPCDRAFAFVRDEHTRSQW 541

Query: 457 ADNNIDVYSAAAIKVGPCSLP-GSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
                DV S          +P GS  G                     +  L G+  S  
Sbjct: 542 -----DVLSHGNPVQEVSRIPNGSHPGNC-------------------ISLLRGLNASQN 577

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRII 566
             ++     L + C+    +A G+   +++APID   A+           PLLPSGF I+
Sbjct: 578 SMLI-----LQESCT----DASGSL--VVYAPIDIPAANVVMSGEDPSAIPLLPSGFSIL 626

Query: 567 PLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEH 626
           P   G+  +S +R     SA                      S++T+AF+    S     
Sbjct: 627 P--DGRPGASSSRAGQAPSA---------------------GSLVTVAFQILVSSLPSAK 663

Query: 627 VATMARQYVRSIIS-SVQRVALALS 650
           +   +   V S+IS +V+++  AL+
Sbjct: 664 LNAESVATVNSLISTTVEQIKAALN 688


>gi|413939124|gb|AFW73675.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 701

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 20  RYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWFQNRRTQMKAQ 75

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R++   L+A N K+   N  + E
Sbjct: 76  HERQDNCFLRAENDKIRCENIAMQE 100



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 175/454 (38%), Gaps = 115/454 (25%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM--PPVQHFVRAEMLPSG 291
           L+ ++ + P R+F  LRY   +E G   + + S+   Q       PP     R+  LPSG
Sbjct: 322 LHVMSPVVPTREFCFLRYCRQIEHGLWAIADISVDQQQRDARFGAPPS----RSCRLPSG 377

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVL--RPLYESSTVLAQKTTMAALRQL------ 343
            LI     G S +  V+HM++E   VP  L  R L  S         +AAL++       
Sbjct: 378 CLIADMADGSSKVTWVEHMEIED-RVPIHLLYRDLVLSGAAFGAHRWLAALQRACERCAC 436

Query: 344 ---------RQMAQEVTQS-----SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT 389
                    R +A     S     +V   G+R  ++  LSQR+   F  +++      WT
Sbjct: 437 LATAGIMPHRDIAAAGDISHRELLAVTPEGKR--SMMKLSQRMVNSFCASLSASQLHRWT 494

Query: 390 VMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFL 449
            +       V V+V+ S D             P   + V+ + A+ +   VP      F+
Sbjct: 495 TLSGPNDVGVRVMVHRSTD-------------PGQPSGVVLSAATSIWLPVPCDRAFAFV 541

Query: 450 R-EH-RSEWADNNIDVYSAAAIKVGPCSLP-GSRVGTFGSQVILPLAHTIEHEEFMEVIK 506
           R EH RS+W     DV S          +P GS  G                     +  
Sbjct: 542 RDEHTRSQW-----DVLSHGNPVQEVSRIPNGSHPGNC-------------------ISL 577

Query: 507 LEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAP 557
           L G+  S    ++     L + C+    +A G+   +++APID   A+           P
Sbjct: 578 LRGLNASQNSMLI-----LQESCT----DASGSL--VVYAPIDIPAANVVMSGEDPSAIP 626

Query: 558 LLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEF 617
           LLPSGF I+P   G+  +S +R     SA                      S++T+AF+ 
Sbjct: 627 LLPSGFSILP--DGRPGASSSRAGQAPSA---------------------GSLVTVAFQI 663

Query: 618 AFESHMQEHVATMARQYVRSIIS-SVQRVALALS 650
              S     +   +   V S+IS +V+++  AL+
Sbjct: 664 LVSSLPSAKLNAESVATVNSLISTTVEQIKAALN 697


>gi|218200438|gb|EEC82865.1| hypothetical protein OsI_27729 [Oryza sativa Indica Group]
          Length = 785

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 136/360 (37%), Gaps = 72/360 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ---NGPTMPPVQHFVRAEM 287
           SA     + L P R+   LRY     DG+  V + SL  ++    G   P      R   
Sbjct: 411 SAEFQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR- 469

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQ 342
            PSG LI+    G S +  V+H++ +   V  + +P+  S      +  +A L     R 
Sbjct: 470 -PSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERL 528

Query: 343 LRQMAQEVTQSSVNGW-----GRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
              MA  V  S   G      GRR  ++  L++R+   F   V   T   WT +   G +
Sbjct: 529 ASAMASNVASSGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAE 586

Query: 398 DVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSE 455
           DV V+   S D             P     ++   A+     VPP+ +  FLR+   RSE
Sbjct: 587 DVRVMTRKSVDD------------PGRPPGIVLNAATSFWLPVPPSRVFDFLRDDSTRSE 634

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           W     D+ S                      V+  +AH     +    + L  V ++  
Sbjct: 635 W-----DILSNGG-------------------VVQEMAHIANGRDHGNAVSLLRVNNANS 670

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRII 566
           +     +M +LQ C     +A G+   +I+AP+D             D   LLPSGF I+
Sbjct: 671 NQ---SNMLILQECC---TDATGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 722



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 127 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 182

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+A N KL A N    E
Sbjct: 183 HERHENNALRAENEKLRAENMRYKE 207


>gi|147811086|emb|CAN61351.1| hypothetical protein VITISV_023503 [Vitis vinifera]
          Length = 784

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 176/440 (40%), Gaps = 88/440 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+     +G   V + S+  I+     P    FV    LPSG
Sbjct: 407 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSVAPT---FVNCRRLPSG 463

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEV 350
            +++    G S +  V+H + +  +V ++ RPL  S      +  +A L RQ   +A  +
Sbjct: 464 CVVQDMPNGYSKVTWVEHAEYDESAVHQLYRPLLGSGMGFGAQRWVATLQRQCECLAILM 523

Query: 351 TQS--------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           + +        ++   GRR  ++  L+QR++  F   V   T   W  +    +D DV V
Sbjct: 524 SSTVPTRDHTAAITAGGRR--SMLKLAQRMTDNFCAGVCASTVHKWNKLCAGNVDEDVRV 581

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S D             P     ++ + A+ +   V P  L  FLR+   RSEW   
Sbjct: 582 MTRKSVDD------------PGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEW--- 626

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S      GP               +  +AH  + ++    + L  +  S  +A  
Sbjct: 627 --DILSNG----GP---------------MQEMAHIAKGQDHGNCVSL--LRASAMNANQ 663

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLDS 570
              + L + C     +A G+   +++AP+D        +  D A   LLPSGF I+P   
Sbjct: 664 SSMLILQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGP 717

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
           G                  GP     TN+   N     S++T+AF+    S     +   
Sbjct: 718 GSR----------------GPNSGXHTNSGGPNRVS-GSLLTVAFQILVNSLPTAKLTVE 760

Query: 631 ARQYVRSIIS-SVQRVALAL 649
           + + V ++IS +VQ++  AL
Sbjct: 761 SVETVNNLISCTVQKIKAAL 780



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE L+ ECP P   +R +L R      ++E +Q+K WFQNRR + K  
Sbjct: 88  RYHRHTPQQIQELEALFKECPHPDEKQRLELSRRL----SLETRQVKFWFQNRRTQMKTQ 143

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S L+  N KL A N
Sbjct: 144 LERHENSILRQENDKLRAEN 163


>gi|345195194|tpg|DAA34962.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413924373|gb|AFW64305.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 698

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 20  RYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWFQNRRTQMKAQ 75

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R++   L+A N K+   N  + E
Sbjct: 76  HERQDNCFLRAENDKIRCENIAMRE 100



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 106/444 (23%), Positives = 174/444 (39%), Gaps = 99/444 (22%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM--PPVQHFVRAEMLPSG 291
           L+ ++ + P R+F  LRY   +E G   + + S+   Q+      PP     R+  LPSG
Sbjct: 323 LHVMSPVVPTREFCFLRYCRQIERGLWAIADISVDLQQHDARFGAPPS----RSCRLPSG 378

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVL--RPLYESSTVLAQKTTMAALRQLRQMA-- 347
            LI     G S +  V+HM++E   VP  L  R L  S         +AAL++  +    
Sbjct: 379 CLIADMADGSSKVTWVEHMEIED-RVPIHLLYRDLILSGAAFGAHRWLAALQRACERCAC 437

Query: 348 --------QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
                   +++  + V   G+R  ++  LSQR+   F  +++      WT +       V
Sbjct: 438 LVPAGMPHRDIAVAGVTPEGKR--SMMKLSQRMVSSFCASLSASQLHRWTTLSGPSDVGV 495

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR-EH-RSEWA 457
            V V+ S D             P   + V+ + A+ +   VP   +  F+R EH RS+W 
Sbjct: 496 RVTVHRSTD-------------PGQPSGVVLSAATSIWLPVPCDRVFAFVRDEHTRSQW- 541

Query: 458 DNNIDVYSAAAIKVGPCSLP-GSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
               DV S          +P GS  G                     +  L G+  S   
Sbjct: 542 ----DVLSHGNPVQEVSRIPNGSHPGNC-------------------ISLLRGLNASQN- 577

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRIIP 567
                 M +LQ     +    GT + +++APID   A+           PLLPSGF I+P
Sbjct: 578 -----SMLILQ-----ESCTDGTGSLVVYAPIDIPAANVVMSGEDPSAIPLLPSGFTILP 627

Query: 568 LDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHV 627
              G+  +               P+ + A      +     S++T+AF+    S     +
Sbjct: 628 --DGRPGA---------------PSSSSAGGPLVGSPAAAGSLVTVAFQILVSSLPSSRL 670

Query: 628 ATMARQYVRSIIS-SVQRVALALS 650
              +   V S+IS +V+++  AL+
Sbjct: 671 NAESVATVNSLISTTVEQIKAALN 694


>gi|242063218|ref|XP_002452898.1| hypothetical protein SORBIDRAFT_04g034580 [Sorghum bicolor]
 gi|241932729|gb|EES05874.1| hypothetical protein SORBIDRAFT_04g034580 [Sorghum bicolor]
          Length = 707

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 20  RYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWFQNRRTQMKAQ 75

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R++   L+A N K+   N  + E
Sbjct: 76  HERQDNCFLRAENDKIRCENIAMRE 100



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 144/360 (40%), Gaps = 81/360 (22%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM--PPVQHFVRAEMLPSG 291
           L+ ++ + P R+F  LRY   +E G   + + S+   Q       PP     R+  LPSG
Sbjct: 331 LHMMSPVVPTREFCFLRYCRQIEHGLWAIADISVDLQQRDARFGAPPS----RSCRLPSG 386

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVL--RPLYESSTVLAQKTTMAALRQLRQMA-- 347
            LI     G S +  V+HM++E   VP  L  R L  S         +AAL++  +    
Sbjct: 387 CLIADMADGSSKVTWVEHMEIED-RVPIHLLYRDLILSGAAFGAHRWLAALQRACERCAC 445

Query: 348 --------QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
                   +++  + V   G+R  ++  LSQR+   F  +++      WT +       V
Sbjct: 446 LATAGMPHRDIAAAGVTPEGKR--SMMKLSQRMVSSFCASLSASQLHRWTTLSGPNDVGV 503

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR-EH-RSEWA 457
            V+V+ S D             P   + V+ + A+ +   VP   +  F+R EH RS+W 
Sbjct: 504 RVMVHRSTD-------------PGQPSGVVLSAATSIWLPVPCDRVFAFVRDEHTRSQW- 549

Query: 458 DNNIDVYSAAAIKVGPCSLP-GSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
               DV S          +P GS  G                     +  L G+  S   
Sbjct: 550 ----DVLSHGNPVQEVSRIPNGSHPGNC-------------------ISLLRGLNASQNS 586

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRIIP 567
            ++     L + C+    +A G+   +++APID   A+           PLLPSGF I+P
Sbjct: 587 MLI-----LQESCT----DASGSL--VVYAPIDIPAANVVMSGEDPSAIPLLPSGFTILP 635


>gi|224130112|ref|XP_002320755.1| predicted protein [Populus trichocarpa]
 gi|222861528|gb|EEE99070.1| predicted protein [Populus trichocarpa]
          Length = 823

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 176/439 (40%), Gaps = 79/439 (17%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+     +G   V + S+  I+      P   FV    LPSG
Sbjct: 439 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDTIRETSGASPT--FVNCRRLPSG 496

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ-----M 346
            +++    G S +  ++H + +     ++ RPL  S      +  +A L++  +     M
Sbjct: 497 CVVQDMPNGYSKVTWIEHAEYDESQTHQLYRPLISSGMGFGAQRWIATLQRQSECLAILM 556

Query: 347 AQEV---TQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVL 402
           +  V     +++   GRR  ++  L+QR++  F   V   T   W  +    +D DV V+
Sbjct: 557 SSNVPSRDHTAITASGRR--SMLKLAQRMTANFCAGVCASTVHKWNKLNAGNVDEDVRVM 614

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
              S D             P     ++ + A+ +   V P  L  FLR+   RSEW    
Sbjct: 615 TRKSVDD------------PGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEW---- 658

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            D+ S      GP               +  +AH  + ++    + L  +  S  +A   
Sbjct: 659 -DILSNG----GP---------------MQEMAHIAKGQDHGNCVSL--LRASAMNANQS 696

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLDSG 571
             + L + C     +A G+   +++AP+D        +  D A   LLPSGF I+P   G
Sbjct: 697 SMLILQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP--DG 748

Query: 572 KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMA 631
             +  P  T         GP  N  +N          S++T+AF+    S     +   +
Sbjct: 749 PGSRGPPTT-------NGGPTANNNSNGGGPERVS-GSLLTVAFQILVNSLPTAKLTVES 800

Query: 632 RQYVRSIIS-SVQRVALAL 649
            + V ++IS +VQ++  AL
Sbjct: 801 VETVNNLISCTVQKIKAAL 819



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREK- 74
           +Y R+TP+Q++ LE L+ ECP P   +R +L R  C     +E +Q+K WFQNRR + K 
Sbjct: 118 RYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLC-----LETRQVKFWFQNRRTQMKT 172

Query: 75  --QRKEASRLQAVNRKLTAMN 93
             +R E S L+  N KL A N
Sbjct: 173 QLERHENSLLRQENDKLRAEN 193


>gi|226498004|ref|NP_001142912.1| uncharacterized protein LOC100275344 [Zea mays]
 gi|195611342|gb|ACG27501.1| hypothetical protein [Zea mays]
          Length = 698

 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 20  RYHRHTPRQIQQLEAMFKECPHPDENQRMQLSREL----GLEPRQIKFWFQNRRTQMKAQ 75

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R++   L+A N K+   N  + E
Sbjct: 76  HERQDNCFLRAENDKIRCENIAMRE 100



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 175/444 (39%), Gaps = 99/444 (22%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM--PPVQHFVRAEMLPSG 291
           L+ ++ + P R+F  LRY   +E G   + + S+   Q+      PP     R+  LPSG
Sbjct: 323 LHVMSPVVPTREFCFLRYCRQIERGLWAIADISVDLQQHDARFGAPPS----RSCRLPSG 378

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVL--RPLYESSTVLAQKTTMAALRQLRQMA-- 347
            LI     G S +  V+HM++E   VP  L  R L  S   L     +AAL++  +    
Sbjct: 379 CLIADMADGSSKVTWVEHMEIED-RVPIHLLYRDLILSGAALGAHRWLAALQRACERCAC 437

Query: 348 --------QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
                   +++  + V   G+R  ++  LSQR+   F  +++      WT +       V
Sbjct: 438 LVPAGMPHRDIAVAGVTPEGKR--SMMKLSQRMVSSFCASLSASQLHRWTTLSGPSDVGV 495

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR-EH-RSEWA 457
            V V+ S D             P   + V+ + A+ +   VP   +  F+R EH RS+W 
Sbjct: 496 RVTVHRSTD-------------PGQPSGVVLSAATSIWLPVPCDRVFAFVRDEHRRSQW- 541

Query: 458 DNNIDVYSAAAIKVGPCSLP-GSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
               DV S          +P GS  G                     +  L G+  S   
Sbjct: 542 ----DVLSHGNPVQEVSRIPNGSHPGNC-------------------ISLLRGLNASQN- 577

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRIIP 567
                 M +LQ     +    GT + +++APID   A+           PLLPSGF I+P
Sbjct: 578 -----SMLILQ-----ESCTDGTGSLVVYAPIDIPAANVVMSGEDPSAIPLLPSGFTILP 627

Query: 568 LDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHV 627
              G+  +               P+ + A      +     S++T+AF+    S     +
Sbjct: 628 --DGRPGA---------------PSSSSAGGPLVGSPAAAGSLVTVAFQILVSSLPSSRL 670

Query: 628 ATMARQYVRSIIS-SVQRVALALS 650
              +   V S+IS +V+++  AL+
Sbjct: 671 NAESVATVNSLISTTVEQIKAALN 694


>gi|223950133|gb|ACN29150.1| unknown [Zea mays]
 gi|345193169|tpg|DAA34950.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414876613|tpg|DAA53744.1| TPA: outer cell layer1 [Zea mays]
          Length = 803

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 26/132 (19%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE L+ ECP P   +R +L +       ++P+Q+K WFQNRR + K +
Sbjct: 105 RYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL----GLDPRQVKFWFQNRRTQMKTQ 160

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  +S        SC S 
Sbjct: 161 LERHE-----------NALLKQENDKLRA-------ENMAIREAMRSPMCG----SCGSP 198

Query: 137 VTSGQHHLTPQH 148
              G+  L  QH
Sbjct: 199 AMLGEVSLEEQH 210



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 82/363 (22%), Positives = 151/363 (41%), Gaps = 75/363 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI---QNGPTMPPVQHFVRAEML 288
           A L  L+ L P R+   LR+   L +G+  V + S+  +    N  T     + +R   L
Sbjct: 429 AELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGN-IRCRRL 487

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG +++    G   +  V++ + +  SV ++ RPL  S      +  +A L RQ   +A
Sbjct: 488 PSGCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLA 547

Query: 348 QEVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM----GNDG 395
             ++  +V+          G+R  ++  L++R++  F   V+  +   W+ +    G+ G
Sbjct: 548 ILMSPDTVSANDSSVITQEGKR--SMLKLARRMTENFCAGVSASSAREWSKLDGAAGSIG 605

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--R 453
            +DV V+   S D+            P     V+ + A+ +   V P  L  FLR+   R
Sbjct: 606 -EDVRVMARKSVDE------------PGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLR 652

Query: 454 SEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHS 513
           +EW     D+ S      GP             Q +  +A   EH   + +++   +  +
Sbjct: 653 AEW-----DILSNG----GPM------------QEMANIAKGQEHGNSVSLLRASAMSAN 691

Query: 514 PEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFR 564
               ++     L + C+    +A G+   +++AP+D            +    LLPSGF 
Sbjct: 692 QSSMLI-----LQETCT----DASGSM--VVYAPVDIPAMQLVMNGGDSTYVALLPSGFA 740

Query: 565 IIP 567
           I+P
Sbjct: 741 ILP 743


>gi|187611422|sp|Q7Y0V7.2|ROC6_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC6; AltName:
           Full=GLABRA 2-like homeobox protein 6; AltName:
           Full=HD-ZIP protein ROC6; AltName: Full=Homeodomain
           transcription factor ROC6; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 6
          Length = 872

 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 25/132 (18%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+E +Q+K WFQNRR + KQ 
Sbjct: 125 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKQT 180

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
           +       + R     N LL +END+L+        EN   R+  ++   A    SC   
Sbjct: 181 Q-------IERH---ENALLRQENDKLRA-------ENMTIREAMRNPMCA----SCGGA 219

Query: 137 VTSGQHHLTPQH 148
              G+  L  QH
Sbjct: 220 AVLGEVSLEEQH 231



 Score = 39.3 bits (90), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 14/169 (8%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDG----SLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
           A L  L+ L P R+   LR+     +G      V  +  L+  QNG        ++   +
Sbjct: 462 AELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGGGGSSSSSYMGCRL 521

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQM 346
           LP+G +++    G S +  V H + +  +  ++ RPL  S   L  +  +A+L RQ + +
Sbjct: 522 LPTGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGARRWLASLQRQCQYL 581

Query: 347 AQEVTQS-------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW 388
           A   + S       ++   GRR  ++  L+QR++  F   V     + W
Sbjct: 582 AILCSNSLPARDHAAITPVGRR--SMLKLAQRMTDNFCAGVCASAAQKW 628


>gi|356568318|ref|XP_003552359.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 822

 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE L+ ECP P   +R +L R      N+E +Q+K WFQNRR + K  
Sbjct: 127 RYHRHTPQQIQELESLFKECPHPDEKQRLELSRRL----NLETRQVKFWFQNRRTQMKTQ 182

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E S L+  N KL A N  + E
Sbjct: 183 LERHENSLLRQENDKLRAENMSMRE 207



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 176/440 (40%), Gaps = 95/440 (21%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+     +G   V + S+  I+     P    FV    LPSG
Sbjct: 452 AELQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSIDTIRETSGAPT---FVNCRRLPSG 508

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL-AQKTTMAALRQ-------L 343
            +++    G S +  V+H + +   + ++ RPL  S     AQ+      RQ       +
Sbjct: 509 CVVQDMPNGYSKVTWVEHAEYDESQIHQLFRPLLSSGMGFGAQRWVTTLQRQCECLAILM 568

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM--GNDGMDDVTV 401
              A     S+++  GRR  ++  L+ R++  F   V   T   W  +  GN G +DV V
Sbjct: 569 SSAAPSREHSAISSGGRR--SMLKLAHRMTNNFCSGVCASTVHKWNKLNAGNVG-EDVRV 625

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S D             P     ++ + A+ +   V    L  FLR+   RSEW   
Sbjct: 626 MTRKSVDD------------PGEPPGIVLSAATSVWLPVSSQRLFDFLRDERLRSEW--- 670

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S      GP             Q +  +A   +H   + +++   +     +A  
Sbjct: 671 --DILSNG----GPM------------QEMAHIAKGQDHANCVSLLRASAI-----NANQ 707

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLDS 570
              + L + C+    +A G+   +++AP+D        +  D A   LLPSGF I+P  S
Sbjct: 708 SSMLILQETCT----DASGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGS 761

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
           G+E                G +  RA       S C+   +T+AF+    S     +   
Sbjct: 762 GEEQG--------------GASQQRAA------SGCL---LTVAFQILVNSLPTAKLTVE 798

Query: 631 ARQYVRSIIS-SVQRVALAL 649
           + + V ++IS +VQ++  AL
Sbjct: 799 SVETVNNLISCTVQKIKSAL 818


>gi|302783435|ref|XP_002973490.1| hypothetical protein SELMODRAFT_450557 [Selaginella moellendorffii]
 gi|300158528|gb|EFJ25150.1| hypothetical protein SELMODRAFT_450557 [Selaginella moellendorffii]
          Length = 684

 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 38/240 (15%)

Query: 233 ILYA----LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
           ++YA    L+ L P R+ + LRY     +G   + + S+  ++  P  PP    +R  + 
Sbjct: 389 VMYAEFQVLSPLVPTREAYFLRYCKQHAEGVWAIVDVSVDGLRENP--PPQ---LRNRLR 443

Query: 289 PSGYLIRPCEGG------GSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-R 341
           PSG+LI+    G      G  + I+ HM+ +   V  + R L  S      K  +A L R
Sbjct: 444 PSGFLIQDMPNGYSKVSHGFQVTILQHMEYDDRQVNNMYRGLVSSGLAFGAKRWLATLQR 503

Query: 342 QLRQMAQEVTQSSV--------NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGN 393
           Q  ++A  +  +          N  GRR  ++  L+QR++  F   V+  T   WT +  
Sbjct: 504 QCERLAVLLATNISPRDLGGISNATGRR--SMLKLAQRMTNNFCAGVSASTVHTWTTLSG 561

Query: 394 DGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHR 453
            G DDV V+   S D             P     ++ + A+ L   V P  +  FLR+ R
Sbjct: 562 SGEDDVRVMTRKSIDN------------PGEPPGIVLSAATSLWMPVSPQRVFEFLRDDR 609



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 10/90 (11%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           ++ R+T  Q++ +E ++ ECP P   +R QL RE      +EP+Q+K WFQNRR + K  
Sbjct: 74  RFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSREL----GLEPRQVKFWFQNRRTQMKVS 129

Query: 75  ----QRKEASRLQAVNRKLTAMNKLLMEEN 100
               +  +A + +A N  L A N+ L  EN
Sbjct: 130 IKVFEENQAHQERAENSMLRAENERLRSEN 159


>gi|302398853|gb|ADL36721.1| HD domain class transcription factor [Malus x domestica]
          Length = 824

 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE L+ ECP P   +R +L R      N+E +Q+K WFQNRR + K  
Sbjct: 121 RYHRHTPQQIQELEALFKECPHPDEKQRLELSRRL----NLETRQVKFWFQNRRTQMKTQ 176

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S L+  N KL A N
Sbjct: 177 LERHENSLLRQENDKLRAEN 196



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 103/449 (22%), Positives = 170/449 (37%), Gaps = 98/449 (21%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+   L +G   V + S+  I++    P    F+    LPSG
Sbjct: 439 AELQVLSPLVPVREVNFLRFCKQLAEGVWAVVDVSVDVIRDTSGAPT---FMNCRRLPSG 495

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVT 351
            +++    G S +  V+H + +   V ++ RPL  S      +  +A L++  +    + 
Sbjct: 496 CVVQDMPNGYSRVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWVATLQRQSEFQAILM 555

Query: 352 QSSV--------NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVL 402
            SSV           GRR  ++  L+QR++  F   V   T   WT +    +D DV V+
Sbjct: 556 SSSVPSRDHTAITASGRR--SMLKLAQRMTDNFCAGVCASTVHKWTKLNAGNVDEDVRVM 613

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
              S D             P     V+ + A+ +   V P  L  FLR+   RSEW    
Sbjct: 614 TRESLDD------------PGEPPGVVLSAATSVWLPVSPQRLFDFLRDERLRSEW---- 657

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            D+ S      GP               +  +AH  + ++    + L     +       
Sbjct: 658 -DILSNG----GP---------------MQEMAHIAKGQDPGNCVSLLRARANANQG--- 694

Query: 521 RDMFLLQLCSGMDENAVGTCAEL-IFAPID-------ASFADDA--PLLPSGFRIIPLDS 570
             M +LQ      E  +     L ++AP+D        +  D A   LLPSGF I+P   
Sbjct: 695 -SMLILQ------ETRIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGP 747

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMR---------SVMTIAFEFAFES 621
           G                  GP   +   + S+N              S++T+ F+    S
Sbjct: 748 GSR----------------GPMSGKGATHGSSNGGGCGDDGGNRVSGSLLTMTFQILVNS 791

Query: 622 HMQEHVATMARQYVRSIIS-SVQRVALAL 649
                +   + + V  +IS +VQ++  +L
Sbjct: 792 LPAGKLTVESVETVNHLISCTVQKIKASL 820


>gi|125564438|gb|EAZ09818.1| hypothetical protein OsI_32106 [Oryza sativa Indica Group]
          Length = 815

 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 26/132 (19%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+E +Q+K WFQNRR + K +
Sbjct: 124 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKTQ 179

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  ++   A    SC   
Sbjct: 180 IERHE-----------NALLRQENDKLRA-------ENMTIREAMRNPMCA----SCGGA 217

Query: 137 VTSGQHHLTPQH 148
              G+  L  QH
Sbjct: 218 AVLGEVSLEEQH 229



 Score = 39.7 bits (91), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 14/169 (8%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDG----SLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
           A L  L+ L P R+   LR+     +G      V  +  L+  QNG        ++   +
Sbjct: 460 AELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGGGGSSSSSYMGCRL 519

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQM 346
           LP+G +++    G S +  V H + +  +  ++ RPL  S   L  +  +A+L RQ + +
Sbjct: 520 LPTGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGARRWLASLQRQCQYL 579

Query: 347 AQEVTQS-------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW 388
           A   + S       ++   GRR  ++  L+QR++  F   V     + W
Sbjct: 580 AILCSNSLPARDHAAITPVGRR--SMLKLAQRMTDNFCAGVCASAAQKW 626


>gi|326523973|dbj|BAJ96997.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 774

 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 26/132 (19%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+E +Q+K WFQNRR + K +
Sbjct: 47  RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKTQ 102

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  +S T      +C   
Sbjct: 103 IERHE-----------NALLRQENDKLRT-------ENMTIREAMRSPTCG----NCGGA 140

Query: 137 VTSGQHHLTPQH 148
              G+  L  QH
Sbjct: 141 AVLGEVSLEEQH 152



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 102/456 (22%), Positives = 178/456 (39%), Gaps = 81/456 (17%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI---QNGPTMPPVQHFVRAEML 288
           A L  L+ L P R+   LR+     DG   + + S+  +    +G        ++   +L
Sbjct: 367 AELQVLSPLVPIREVTFLRFCKQHADGLWAIVDVSVDGVLRPDSGAGGAGPAGYMGCRLL 426

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG ++   + G + +  V H + +  +V E+ RPL  S   L  +  +A+L RQ    A
Sbjct: 427 PSGCIVEDMQNGYAKVTWVVHAEYDEAAVHELYRPLLRSGQALGARRWLASLQRQCEYHA 486

Query: 348 QEVTQSSVNGWGRR----PAALRA---LSQRLSRGFNEAVNGFT-------DEGWTVMGN 393
              +    N   R     PA  R    L+QR++  F   V           DE W V G 
Sbjct: 487 ILCSNPHPNHGDRHEAISPAGRRCMLRLAQRMADNFCAGVCATAAQKWRRLDE-WRVEGA 545

Query: 394 DGMDDVTVLVNSSPDK--LMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
            G +  +       DK  +M      A G P     VL A  S+ L    P  +  +LR+
Sbjct: 546 GGREQAS----GGEDKVRMMARQSVGAPGEPP--GVVLSATTSVRLPGTSPQRVFDYLRD 599

Query: 452 H--RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEG 509
              R EW     D+ +                     Q +  +A    H   + +++   
Sbjct: 600 EQRRGEW-----DILANGE----------------AMQEMDHIAKGQHHGNAVSLLRPNA 638

Query: 510 VGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDA-------SFADDA--PLLP 560
              +  + ++     L + C+    +A G+   +++AP+D           D A   LLP
Sbjct: 639 TSGNQNNMLI-----LQETCT----DASGSL--VVYAPVDVQSMHVVMGGGDSAYVSLLP 687

Query: 561 SGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFE 620
           SGF I+P D     ++P         L+  P G+    +   ++    S++T+AF+    
Sbjct: 688 SGFAILP-DGHTMQAAP---------LDPSPQGSSPIAHGGGSNNNPGSLVTVAFQILVN 737

Query: 621 SHMQEHVATMARQYVRSIIS-SVQRVALALSPSNIS 655
           +     +   +   V +++S ++Q++  AL  S IS
Sbjct: 738 NLPTAKLTVESVDTVSNLLSCTIQKIKSALQASIIS 773


>gi|110430672|gb|ABG73462.1| homeodomain transcription factor [Oryza brachyantha]
          Length = 844

 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 26/132 (19%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+E +Q+K WFQNRR + K +
Sbjct: 129 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKTQ 184

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  ++   A    SC   
Sbjct: 185 IERHE-----------NALLRQENDKLRA-------ENMTIREAMRNPMCA----SCGGA 222

Query: 137 VTSGQHHLTPQH 148
              G+  L  QH
Sbjct: 223 AVLGEVSLEEQH 234


>gi|125571186|gb|EAZ12701.1| hypothetical protein OsJ_02619 [Oryza sativa Japonica Group]
          Length = 840

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 26/132 (19%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+E +Q+K WFQNRR + K +
Sbjct: 125 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKTQ 180

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  ++   A    SC   
Sbjct: 181 IERHE-----------NALLRQENDKLRA-------ENMTIREAMRNPMCA----SCGGA 218

Query: 137 VTSGQHHLTPQH 148
              G+  L  QH
Sbjct: 219 AVLGEVSLEEQH 230


>gi|357159529|ref|XP_003578475.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 1
           [Brachypodium distachyon]
          Length = 864

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+E +Q+K WFQNRR + K  
Sbjct: 129 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKTQ 184

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+  N KL A N  + E
Sbjct: 185 IERHENALLRQENDKLRAENMTIRE 209



 Score = 46.2 bits (108), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 99/456 (21%), Positives = 175/456 (38%), Gaps = 74/456 (16%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI---QNGPTMPPVQHFVRAEML 288
           A L  L+ L P R+   LR+     +G   V + S   +     G        ++   +L
Sbjct: 445 AELQVLSPLVPIREVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAAAGYMGCRLL 504

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG ++     G + +  V H + +  +V  + RPL  S   L  +  +A+L RQ + +A
Sbjct: 505 PSGCVVEDMRNGYAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLASLQRQCQYLA 564

Query: 348 QEVTQS-------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW---------TVM 391
                S       +++  GRR  ++  L+QR++  F   V     + W           M
Sbjct: 565 ILRNNSLPSQDNQAISPVGRR--SMLKLAQRMADNFCAGVCATAAQKWRRLDEWRVEGAM 622

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAV-SNAVLCAKASMLLQNVPPAILLRFLR 450
              G            DK + +    + G P      VL A  S+ L   PP  +  +LR
Sbjct: 623 PGGGDQQQHQAGGGDGDKEVRMMARHSVGAPGEPPGVVLSATTSVRLPGTPPQRVFDYLR 682

Query: 451 EH--RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLE 508
           +   R EW     D+ +                     Q +  +A    H   + +++  
Sbjct: 683 DEQRRGEW-----DILANGEAM----------------QEMDHIAKGQLHGNAVSLLRPN 721

Query: 509 GVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAEL-IFAPIDA-------SFADDA--PL 558
               +        +M +LQ      E    +   L ++AP+D        +  D A   L
Sbjct: 722 ATSGNQN------NMLILQ------ETCTDSSGSLVVYAPVDVQSMHIVMNGGDSAYVSL 769

Query: 559 LPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFA 618
           LPSGF I+P   G  T  P   +D A + +    G+  +  +  N+T   S++T+AF+  
Sbjct: 770 LPSGFAILP--DGHNT-PPGAVVDPAGSSQQSQQGSSESAAHGNNNTG--SLVTVAFQIL 824

Query: 619 FESHMQEHVATMARQYVRSIIS-SVQRVALALSPSN 653
             +     +   +   V +++S ++Q++  AL  SN
Sbjct: 825 VNNLPTAKLTVESVDTVSNLLSCTIQKIKSALQASN 860


>gi|18266646|gb|AAL67592.1|AC018929_14 putative outer cell layer homeo domain protein [Oryza sativa
           Japonica Group]
 gi|125575788|gb|EAZ17072.1| hypothetical protein OsJ_32569 [Oryza sativa Japonica Group]
          Length = 866

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 8/104 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           G+    +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR
Sbjct: 115 GNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRR 170

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
            + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 171 TQMKAQQD----RADNVILRAENENLKSDNFRLQAAIRNVVCPN 210



 Score = 42.7 bits (99), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 13/190 (6%)

Query: 237 LTTLAPARDFWLLRY-TSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIR 295
           L+ L  AR+    RY     ++GS  + +   +  + G     V   VR    PSG +I+
Sbjct: 456 LSPLVAAREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASV---VRCRRRPSGCIIQ 512

Query: 296 PCEGGGSIIHIVDHMDL--EPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQ 352
               G S +  V+HM++  E   +  V R    S         ++ L RQ  ++A E+ +
Sbjct: 513 DMPNGYSRVVWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELAR 572

Query: 353 SSVN-GWGRRPAA---LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD--VTVLVNSS 406
           +  + G  R P A   +  LSQR+   F   ++    + WT + +   D   VT   N+ 
Sbjct: 573 NIADLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNTE 632

Query: 407 PDKLMGLNLS 416
           P +  G+ L+
Sbjct: 633 PGQPSGVILT 642


>gi|125533056|gb|EAY79621.1| hypothetical protein OsI_34765 [Oryza sativa Indica Group]
          Length = 866

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 8/104 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           G+    +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR
Sbjct: 115 GNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRR 170

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
            + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 171 TQMKAQQD----RADNVILRAENENLKSDNFRLQAAIRNVVCPN 210



 Score = 42.4 bits (98), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 13/190 (6%)

Query: 237 LTTLAPARDFWLLRY-TSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIR 295
           L+ L  AR+    RY     ++GS  + +   +  + G     V   VR    PSG +I+
Sbjct: 456 LSPLVAAREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASV---VRCRRRPSGCIIQ 512

Query: 296 PCEGGGSIIHIVDHMDL--EPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQ 352
               G S +  V+HM++  E   +  V R    S         ++ L RQ  ++A E+ +
Sbjct: 513 DMPNGYSRVVWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELAR 572

Query: 353 SSVN-GWGRRPAA---LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD--VTVLVNSS 406
           +  + G  R P A   +  LSQR+   F   ++    + WT + +   D   VT   N+ 
Sbjct: 573 NIADLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNTE 632

Query: 407 PDKLMGLNLS 416
           P +  G+ L+
Sbjct: 633 PGQPSGVILT 642


>gi|414876612|tpg|DAA53743.1| TPA: outer cell layer1 [Zea mays]
          Length = 702

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 36/168 (21%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE L+ ECP P   +R +L +       ++P+Q+K WFQNRR + K +
Sbjct: 105 RYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL----GLDPRQVKFWFQNRRTQMKTQ 160

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  +S        SC S 
Sbjct: 161 LERHE-----------NALLKQENDKLRA-------ENMAIREAMRSPMCG----SCGSP 198

Query: 137 VTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
              G+  L  QH          L I    L + L++    A +++  P
Sbjct: 199 AMLGEVSLEEQH----------LCIENARLKDELNRVYALATKFLGKP 236



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 36/244 (14%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI---QNGPTMPPVQHFVRAEML 288
           A L  L+ L P R+   LR+   L +G+  V + S+  +    N  T     + +R   L
Sbjct: 429 AELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGN-IRCRRL 487

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG +++    G   +  V++ + +  SV ++ RPL  S      +  +A L RQ   +A
Sbjct: 488 PSGCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLA 547

Query: 348 QEVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM--- 396
             ++  +V+          G+R  ++  L++R++  F   V+  +   W+ +  DG    
Sbjct: 548 ILMSPDTVSANDSSVITQEGKR--SMLKLARRMTENFCAGVSASSAREWSKL--DGAAGS 603

Query: 397 --DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH-- 452
             +DV V+   S D+            P     V+ + A+ +   V P  L  FLR+   
Sbjct: 604 IGEDVRVMARKSVDE------------PGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQL 651

Query: 453 RSEW 456
           R+EW
Sbjct: 652 RAEW 655


>gi|218195394|gb|EEC77821.1| hypothetical protein OsI_17027 [Oryza sativa Indica Group]
          Length = 849

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 15/90 (16%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K +
Sbjct: 123 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 178

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQ 106
            E              N LL +END+L+ +
Sbjct: 179 LERHE-----------NSLLKQENDKLRSE 197


>gi|31339099|dbj|BAC77156.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 879

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 8/104 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           G+    +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR
Sbjct: 128 GNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRR 183

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
            + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 184 TQMKAQQD----RADNVILRAENENLKSDNFRLQAAIRNVVCPN 223



 Score = 42.7 bits (99), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 13/190 (6%)

Query: 237 LTTLAPARDFWLLRY-TSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIR 295
           L+ L  AR+    RY     ++GS  + +   +  + G     V   VR    PSG +I+
Sbjct: 469 LSPLVAAREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASV---VRCRRRPSGCIIQ 525

Query: 296 PCEGGGSIIHIVDHMDL--EPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQ 352
               G S +  V+HM++  E   +  V R    S         ++ L RQ  ++A E+ +
Sbjct: 526 DMPNGYSRVVWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELAR 585

Query: 353 SSVN-GWGRRPAA---LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD--VTVLVNSS 406
           +  + G  R P A   +  LSQR+   F   ++    + WT + +   D   VT   N+ 
Sbjct: 586 NIADLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNTE 645

Query: 407 PDKLMGLNLS 416
           P +  G+ L+
Sbjct: 646 PGQPSGVILT 655


>gi|115483622|ref|NP_001065481.1| Os10g0575600 [Oryza sativa Japonica Group]
 gi|122248972|sp|Q336P2.1|ROC3_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC3; AltName:
           Full=GLABRA 2-like homeobox protein 3; AltName:
           Full=HD-ZIP protein ROC3; AltName: Full=Homeodomain
           transcription factor ROC3; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 3
 gi|78709045|gb|ABB48020.1| OCL4 protein, putative, expressed [Oryza sativa Japonica Group]
 gi|78709046|gb|ABB48021.1| OCL4 protein, putative, expressed [Oryza sativa Japonica Group]
 gi|113640013|dbj|BAF27318.1| Os10g0575600 [Oryza sativa Japonica Group]
          Length = 882

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 8/104 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           G+    +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR
Sbjct: 131 GNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRR 186

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
            + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 187 TQMKAQQD----RADNVILRAENENLKSDNFRLQAAIRNVVCPN 226



 Score = 42.7 bits (99), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 13/190 (6%)

Query: 237 LTTLAPARDFWLLRY-TSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIR 295
           L+ L  AR+    RY     ++GS  + +   +  + G     V   VR    PSG +I+
Sbjct: 472 LSPLVAAREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASV---VRCRRRPSGCIIQ 528

Query: 296 PCEGGGSIIHIVDHMDL--EPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQ 352
               G S +  V+HM++  E   +  V R    S         ++ L RQ  ++A E+ +
Sbjct: 529 DMPNGYSRVVWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELAR 588

Query: 353 SSVN-GWGRRPAA---LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD--VTVLVNSS 406
           +  + G  R P A   +  LSQR+   F   ++    + WT + +   D   VT   N+ 
Sbjct: 589 NIADLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNTE 648

Query: 407 PDKLMGLNLS 416
           P +  G+ L+
Sbjct: 649 PGQPSGVILT 658


>gi|187611428|sp|A2ZAI7.2|ROC3_ORYSI RecName: Full=Homeobox-leucine zipper protein ROC3; AltName:
           Full=GLABR 2-like homeobox protein 3; AltName:
           Full=HD-ZIP protein ROC3; AltName: Full=Homeodomain
           transcription factor ROC3; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 3
          Length = 882

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 8/104 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           G+    +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR
Sbjct: 131 GNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRR 186

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
            + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 187 TQMKAQQD----RADNVILRAENENLKSDNFRLQAAIRNVVCPN 226



 Score = 42.7 bits (99), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 13/190 (6%)

Query: 237 LTTLAPARDFWLLRY-TSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIR 295
           L+ L  AR+    RY     ++GS  + +   +  + G     V   VR    PSG +I+
Sbjct: 472 LSPLVAAREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASV---VRCRRRPSGCIIQ 528

Query: 296 PCEGGGSIIHIVDHMDL--EPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQ 352
               G S +  V+HM++  E   +  V R    S         ++ L RQ  ++A E+ +
Sbjct: 529 DMPNGYSRVVWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELAR 588

Query: 353 SSVN-GWGRRPAA---LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD--VTVLVNSS 406
           +  + G  R P A   +  LSQR+   F   ++    + WT + +   D   VT   N+ 
Sbjct: 589 NIADLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNTE 648

Query: 407 PDKLMGLNLS 416
           P +  G+ L+
Sbjct: 649 PGQPSGVILT 658


>gi|51091201|dbj|BAD35894.1| putative homeobox [Oryza sativa Japonica Group]
          Length = 734

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
          +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 18 RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
           +R +   L+A N K+   N  + E
Sbjct: 74 HERADNCFLRAENDKIRCENIAIRE 98



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 142/362 (39%), Gaps = 65/362 (17%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERS--LKNIQNGPTMPPVQHFVRAEMLPSG 291
           L+ +T   P R+   +RY   +E G   + + S  L+   +    PP     R+  LPSG
Sbjct: 327 LHIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGAPPP-----RSRRLPSG 381

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
            LI     G S +  V+HM++E  S   VL R L  S         +AAL R   + A  
Sbjct: 382 CLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASL 441

Query: 350 VTQ------SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           V        + V   G+R  ++  LSQR+   F  ++       WT +       V V +
Sbjct: 442 VALGVPHHIAGVTPEGKR--SMMKLSQRMVNSFCSSLGASQMHQWTTLSGSNEVSVRVTM 499

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           + S D             P   N V+ + A+ +   VP   +  F+R+  +         
Sbjct: 500 HRSTD-------------PGQPNGVVLSAATSIWLPVPCDHVFAFVRDENTR-------- 538

Query: 464 YSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI----- 518
            S  +  + P  +  S   +    ++L     + H   ++ +     G +P + I     
Sbjct: 539 -SQVSHPLSPPLI--SLTHSLCPPLLLLQWDVLSHGNQVQEVSRIPNGSNPGNCISLLRG 595

Query: 519 ---MPRDMFLLQ-LCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRI 565
                  M +LQ  C+    +A G+   ++++PID   A+           PLLPSGF I
Sbjct: 596 LNASQNSMLILQESCT----DASGSL--VVYSPIDIPAANVVMSGEDPSSIPLLPSGFTI 649

Query: 566 IP 567
           +P
Sbjct: 650 LP 651


>gi|31339101|dbj|BAC77157.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 813

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 15/90 (16%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K +
Sbjct: 107 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 162

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQ 106
            E              N LL +END+L+ +
Sbjct: 163 LERHE-----------NSLLKQENDKLRSE 181



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 101/242 (41%), Gaps = 32/242 (13%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI--QNGPTMPPVQHFVRAEMLP 289
           A L  L+ L P R+   LR++  L DG   V + S   +    G T       +    LP
Sbjct: 440 AELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRLP 499

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA- 347
           SG +++    G   +  V+H + +  SV  + RPL  S   L     +A L RQ   +A 
Sbjct: 500 SGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLAL 559

Query: 348 -------QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT----VMGNDGM 396
                   E   S+++  G+R  ++  L++R++  F   V+  +   W+    + GN G 
Sbjct: 560 LMSSIALPENDSSAIHPEGKR--SMLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIG- 616

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RS 454
           +DV V+   S D+            P     V+ + A+ +   V P  L  FL     R+
Sbjct: 617 EDVHVMARKSVDE------------PGTPXGVVLSAATSVWMPVMPERLFNFLHNKGLRA 664

Query: 455 EW 456
           EW
Sbjct: 665 EW 666


>gi|222629392|gb|EEE61524.1| hypothetical protein OsJ_15826 [Oryza sativa Japonica Group]
          Length = 833

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 15/90 (16%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K +
Sbjct: 107 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 162

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQ 106
            E              N LL +END+L+ +
Sbjct: 163 LERHE-----------NSLLKQENDKLRSE 181


>gi|116310008|emb|CAH67034.1| OSIGBa0139P06.7 [Oryza sativa Indica Group]
          Length = 805

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 15/90 (16%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K +
Sbjct: 106 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 161

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQ 106
            E              N LL +END+L+ +
Sbjct: 162 LERHE-----------NSLLKQENDKLRSE 180



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 146/362 (40%), Gaps = 73/362 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI--QNGPTMPPVQHFVRAEMLP 289
           A L  L+ L P R+   LR++  L DG   V + S   +    G T       +    LP
Sbjct: 432 AELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRLP 491

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA- 347
           SG +++    G   +  V+H + +  SV  + RPL  S   L     +A L RQ   +A 
Sbjct: 492 SGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLAL 551

Query: 348 -------QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT----VMGNDGM 396
                   E   S+++  G+R  ++  L++R++  F   V+  +   W+    + GN G 
Sbjct: 552 LMSSIALPENDSSAIHPEGKR--SMLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIG- 608

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RS 454
           +DV V+   S D+            P     V+ + A+ +   V P  L  FL     R+
Sbjct: 609 EDVHVMARKSVDE------------PGTPPGVVLSAATSVWMPVMPERLFNFLHNKGLRA 656

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EW     D+ S      GP             Q +  +A   ++   + ++K      SP
Sbjct: 657 EW-----DILSNG----GPM------------QEVTSIAKGQQNGNTVCLLKA-----SP 690

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRI 565
                   + L + C+    +A G+   +++AP+D        S  D +   LLPSGF I
Sbjct: 691 TKDKQNSMLILQETCA----DASGSM--VVYAPVDIPAMHLVMSGGDSSCVALLPSGFAI 744

Query: 566 IP 567
           +P
Sbjct: 745 LP 746


>gi|115459990|ref|NP_001053595.1| Os04g0569100 [Oryza sativa Japonica Group]
 gi|38344373|emb|CAD41424.2| OSJNBb0032E06.7 [Oryza sativa Japonica Group]
 gi|113565166|dbj|BAF15509.1| Os04g0569100 [Oryza sativa Japonica Group]
          Length = 806

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 15/90 (16%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K +
Sbjct: 107 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 162

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQ 106
            E              N LL +END+L+ +
Sbjct: 163 LERHE-----------NSLLKQENDKLRSE 181



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 146/362 (40%), Gaps = 73/362 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI--QNGPTMPPVQHFVRAEMLP 289
           A L  L+ L P R+   LR++  L DG   V + S   +    G T       +    LP
Sbjct: 433 AELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRLP 492

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA- 347
           SG +++    G   +  V+H + +  SV  + RPL  S   L     +A L RQ   +A 
Sbjct: 493 SGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLAL 552

Query: 348 -------QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT----VMGNDGM 396
                   E   S+++  G+R  ++  L++R++  F   V+  +   W+    + GN G 
Sbjct: 553 LMSSIALPENDSSAIHPEGKR--SMLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIG- 609

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RS 454
           +DV V+   S D+            P     V+ + A+ +   V P  L  FL     R+
Sbjct: 610 EDVHVMARKSVDE------------PGTPPGVVLSAATSVWMPVMPERLFNFLHNKGLRA 657

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EW     D+ S      GP             Q +  +A   ++   + ++K      SP
Sbjct: 658 EW-----DILSNG----GPM------------QEVTSIAKGQQNGNTVCLLKA-----SP 691

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRI 565
                   + L + C+    +A G+   +++AP+D        S  D +   LLPSGF I
Sbjct: 692 TKDKQNSMLILQETCA----DASGSM--VVYAPVDIPAMHLVMSGGDSSCVALLPSGFAI 745

Query: 566 IP 567
           +P
Sbjct: 746 LP 747


>gi|187611421|sp|Q69T58.2|ROC8_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC8; AltName:
          Full=GLABRA 2-like homeobox protein 8; AltName:
          Full=HD-ZIP protein ROC8; AltName: Full=Homeodomain
          transcription factor ROC8; AltName: Full=Protein RICE
          OUTERMOST CELL-SPECIFIC 8
          Length = 710

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
          +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 18 RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
           +R +   L+A N K+   N  + E
Sbjct: 74 HERADNCFLRAENDKIRCENIAIRE 98



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 138/356 (38%), Gaps = 77/356 (21%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERS--LKNIQNGPTMPPVQHFVRAEMLPSG 291
           L+ +T   P R+   +RY   +E G   + + S  L+   +    PP     R+  LPSG
Sbjct: 327 LHIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGAPPP-----RSRRLPSG 381

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
            LI     G S +  V+HM++E  S   VL R L  S         +AAL R   + A  
Sbjct: 382 CLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASL 441

Query: 350 VTQ------SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           V        + V   G+R  ++  LSQR+   F  ++       WT +       V V +
Sbjct: 442 VALGVPHHIAGVTPEGKR--SMMKLSQRMVNSFCSSLGASQMHQWTTLSGSNEVSVRVTM 499

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNI 461
           + S D             P   N V+ + A+ +   VP   +  F+R+   RS+W     
Sbjct: 500 HRSTD-------------PGQPNGVVLSAATSIWLPVPCDHVFAFVRDENTRSQW----- 541

Query: 462 DVYSAAAIKVGPCSLP-GSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
           DV S          +P GS  G                     +  L G+  S    ++ 
Sbjct: 542 DVLSHGNQVQEVSRIPNGSNPGNC-------------------ISLLRGLNASQNSMLI- 581

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRIIP 567
               L + C+    +A G+   ++++PID   A+           PLLPSGF I+P
Sbjct: 582 ----LQESCT----DASGSL--VVYSPIDIPAANVVMSGEDPSSIPLLPSGFTILP 627


>gi|187611423|sp|Q7Y0V9.2|ROC4_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC4; AltName:
           Full=GLABRA 2-like homeobox protein 4; AltName:
           Full=HD-ZIP protein ROC4; AltName: Full=Homeodomain
           transcription factor ROC4; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 4
          Length = 813

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 15/90 (16%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K +
Sbjct: 107 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 162

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQ 106
            E              N LL +END+L+ +
Sbjct: 163 LERHE-----------NSLLKQENDKLRSE 181



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 146/362 (40%), Gaps = 73/362 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI--QNGPTMPPVQHFVRAEMLP 289
           A L  L+ L P R+   LR++  L DG   V + S   +    G T       +    LP
Sbjct: 440 AELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRLP 499

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA- 347
           SG +++    G   +  V+H + +  SV  + RPL  S   L     +A L RQ   +A 
Sbjct: 500 SGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLAL 559

Query: 348 -------QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT----VMGNDGM 396
                   E   S+++  G+R  ++  L++R++  F   V+  +   W+    + GN G 
Sbjct: 560 LMSSIALPENDSSAIHPEGKR--SMLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIG- 616

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RS 454
           +DV V+   S D+            P     V+ + A+ +   V P  L  FL     R+
Sbjct: 617 EDVHVMARKSVDE------------PGTPPGVVLSAATSVWMPVMPERLFNFLHNKGLRA 664

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EW     D+ S      GP             Q +  +A   ++   + ++K      SP
Sbjct: 665 EW-----DILSNG----GPM------------QEVTSIAKGQQNGNTVCLLKA-----SP 698

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRI 565
                   + L + C+    +A G+   +++AP+D        S  D +   LLPSGF I
Sbjct: 699 TKDKQNSMLILQETCA----DASGSM--VVYAPVDIPAMHLVMSGGDSSCVALLPSGFAI 752

Query: 566 IP 567
           +P
Sbjct: 753 LP 754


>gi|226501626|ref|NP_001145750.1| uncharacterized protein LOC100279257 [Zea mays]
 gi|219884299|gb|ACL52524.1| unknown [Zea mays]
 gi|345195188|tpg|DAA34959.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413916966|gb|AFW56898.1| putative homeobox/lipid-binding domain family protein isoform 1
           [Zea mays]
 gi|413916967|gb|AFW56899.1| putative homeobox/lipid-binding domain family protein isoform 2
           [Zea mays]
          Length = 802

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q+E +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 110 RYHRHTQHQIEEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 165

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R+E ++L+A N KL A N
Sbjct: 166 HERQENAQLRAENDKLRAEN 185



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/350 (22%), Positives = 139/350 (39%), Gaps = 73/350 (20%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ +  RY     DG+  V + SL +++  P +       +    PSG L++  
Sbjct: 426 SPLVPTRESYFARYCKNNPDGTWAVVDVSLDSLRPSPAL-------KCRRRPSGCLVQEM 478

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVN 356
             G S +  V+H++++  SV  + RPL  S         +  L RQ  ++A  +  +  N
Sbjct: 479 PNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLGFGATRWVGTLDRQCERLASAMASNIPN 538

Query: 357 G--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           G         GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 539 GDLGVITSIEGRK--SMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVD 596

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 597 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDETSRSEW-----DILSN 639

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                               Q +  +A+  +H   + ++++     +  + ++     L 
Sbjct: 640 GG----------------AVQEMAHIANGRDHGNCVSLLRVNSANSNQSNMLI-----LQ 678

Query: 527 QLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
           + C+    +A G+   +++AP+D             D   LLPSGF I+P
Sbjct: 679 ESCT----DASGSY--VVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 722


>gi|357159532|ref|XP_003578476.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 2
           [Brachypodium distachyon]
          Length = 777

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+E +Q+K WFQNRR + K  
Sbjct: 42  RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKTQ 97

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+  N KL A N  + E
Sbjct: 98  IERHENALLRQENDKLRAENMTIRE 122



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 99/456 (21%), Positives = 175/456 (38%), Gaps = 74/456 (16%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI---QNGPTMPPVQHFVRAEML 288
           A L  L+ L P R+   LR+     +G   V + S   +     G        ++   +L
Sbjct: 358 AELQVLSPLVPIREVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAAAGYMGCRLL 417

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG ++     G + +  V H + +  +V  + RPL  S   L  +  +A+L RQ + +A
Sbjct: 418 PSGCVVEDMRNGYAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLASLQRQCQYLA 477

Query: 348 QEVTQS-------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT---------VM 391
                S       +++  GRR  ++  L+QR++  F   V     + W           M
Sbjct: 478 ILRNNSLPSQDNQAISPVGRR--SMLKLAQRMADNFCAGVCATAAQKWRRLDEWRVEGAM 535

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAV-SNAVLCAKASMLLQNVPPAILLRFLR 450
              G            DK + +    + G P      VL A  S+ L   PP  +  +LR
Sbjct: 536 PGGGDQQQHQAGGGDGDKEVRMMARHSVGAPGEPPGVVLSATTSVRLPGTPPQRVFDYLR 595

Query: 451 EH--RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLE 508
           +   R EW     D+ +                     Q +  +A    H   + +++  
Sbjct: 596 DEQRRGEW-----DILANGE----------------AMQEMDHIAKGQLHGNAVSLLRPN 634

Query: 509 GVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAEL-IFAPIDA-------SFADDA--PL 558
               +        +M +LQ      E    +   L ++AP+D        +  D A   L
Sbjct: 635 ATSGNQN------NMLILQ------ETCTDSSGSLVVYAPVDVQSMHIVMNGGDSAYVSL 682

Query: 559 LPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFA 618
           LPSGF I+P   G  T  P   +D A + +    G+  +  +  N+T   S++T+AF+  
Sbjct: 683 LPSGFAILP--DGHNT-PPGAVVDPAGSSQQSQQGSSESAAHGNNNTG--SLVTVAFQIL 737

Query: 619 FESHMQEHVATMARQYVRSIIS-SVQRVALALSPSN 653
             +     +   +   V +++S ++Q++  AL  SN
Sbjct: 738 VNNLPTAKLTVESVDTVSNLLSCTIQKIKSALQASN 773


>gi|413916965|gb|AFW56897.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 798

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q+E +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 106 RYHRHTQHQIEEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 161

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R+E ++L+A N KL A N
Sbjct: 162 HERQENAQLRAENDKLRAEN 181



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/350 (22%), Positives = 139/350 (39%), Gaps = 73/350 (20%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ +  RY     DG+  V + SL +++  P +       +    PSG L++  
Sbjct: 422 SPLVPTRESYFARYCKNNPDGTWAVVDVSLDSLRPSPAL-------KCRRRPSGCLVQEM 474

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVN 356
             G S +  V+H++++  SV  + RPL  S         +  L RQ  ++A  +  +  N
Sbjct: 475 PNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLGFGATRWVGTLDRQCERLASAMASNIPN 534

Query: 357 G--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           G         GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 535 GDLGVITSIEGRK--SMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVD 592

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 593 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDETSRSEW-----DILSN 635

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                               Q +  +A+  +H   + ++++     +  + ++     L 
Sbjct: 636 GG----------------AVQEMAHIANGRDHGNCVSLLRVNSANSNQSNMLI-----LQ 674

Query: 527 QLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
           + C+    +A G+   +++AP+D             D   LLPSGF I+P
Sbjct: 675 ESCT----DASGSY--VVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 718


>gi|77378036|gb|ABA70759.1| baby boom interacting protein 1B [Brassica napus]
          Length = 711

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 17/123 (13%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           DG        +Y R+T +Q++ LE  + ECP P   +R QL RE      + P+QIK WF
Sbjct: 23  DGSETDKKKKRYHRHTAQQIQRLESSFKECPHPDDKQRNQLSREL----GLAPRQIKFWF 78

Query: 67  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL---------VYENGYF 117
           QNRR + K + E    +A N  L A N  +  EN  +++ +            V E+ YF
Sbjct: 79  QNRRTQLKAQHE----RADNNALKAENDKIRCENIAIREAIKHAICPNCGSPPVNEDPYF 134

Query: 118 RQH 120
            +H
Sbjct: 135 DEH 137


>gi|242034971|ref|XP_002464880.1| hypothetical protein SORBIDRAFT_01g028160 [Sorghum bicolor]
 gi|241918734|gb|EER91878.1| hypothetical protein SORBIDRAFT_01g028160 [Sorghum bicolor]
          Length = 827

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 11/103 (10%)

Query: 15  NGK---YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRC 71
           NGK   Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR 
Sbjct: 83  NGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRT 138

Query: 72  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
           + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 139 QMKAQQD----RADNVLLRAENESLKSDNYRLQAAIRNVVCPN 177


>gi|186478150|ref|NP_001117231.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189690|gb|AEE27811.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
          Length = 719

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 144/367 (39%), Gaps = 76/367 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           SA     + L P R+ +  RY     DGS  V + SL ++Q     PP +   RA    S
Sbjct: 357 SAEFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQ---PNPPARCRRRA----S 409

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ---- 345
           G LI+    G S +  V+H++++   V  + + +  +      K  +A L RQ  +    
Sbjct: 410 GCLIQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASV 469

Query: 346 MAQEVTQSSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
           MA  ++   V    N  GRR  ++  L++R+   F   V+  T   WT +   G +DV V
Sbjct: 470 MATNISSGEVGVITNQEGRR--SMLKLAERMVISFCAGVSASTAHTWTTLSGTGAEDVRV 527

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S D             P     ++ + A+     VPP  +  FLR+   R+EW   
Sbjct: 528 MTRKSVDD------------PGRPPGIVLSAATSFWIPVPPKRVFDFLRDENSRNEW--- 572

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S                      V+  +AH     +    + L    +S +  ++
Sbjct: 573 --DILSNGG-------------------VVQEMAHIANGRDTGNCVSLLRSANSSQSNML 611

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDS 570
                L + C+        T + +I+AP+D             D   LLPSGF I+P D 
Sbjct: 612 ----ILQESCTD------PTASFVIYAPVDIVAMNIVLNGGDPDYVALLPSGFAILP-DG 660

Query: 571 GKETSSP 577
              + +P
Sbjct: 661 NANSGAP 667



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R+QL RE     N+EP Q+K WFQN+R + K  
Sbjct: 67  RYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSREL----NLEPLQVKFWFQNKRTQMKNH 122

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S L+A N KL   N
Sbjct: 123 HERHENSHLRAENEKLRNDN 142


>gi|414884340|tpg|DAA60354.1| TPA: hypothetical protein ZEAMMB73_058304 [Zea mays]
          Length = 623

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 152/382 (39%), Gaps = 92/382 (24%)

Query: 244 RDFWLLRYTSVLEDGSLVVCERSLKNI-----------------QNGPTMPPVQHFVRAE 286
           R    LRYT  + +G   V + S+  I                  NG T+ P   +    
Sbjct: 220 RSINFLRYTKRVAEGRWAVMDVSVDGILGPPGSRVADAAAAAAAANGVTLVPAW-YTGCR 278

Query: 287 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ 345
           +LPSG L+     G   +  V H + +  +VP + RPL+ S   L     +A+L RQ   
Sbjct: 279 LLPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPLFRSGKALGAHRWLASLQRQCEF 338

Query: 346 MA----------QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNG-------FTDEGW 388
           +A           + T ++++  G+R   +  L+QR+   F  AV+G         DE W
Sbjct: 339 LAVLHSSQVSRGGDNTAAAISSMGKR--GVLELAQRMVADFYSAVSGPVTQPSSSIDE-W 395

Query: 389 TVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRF 448
                 G       V     K  G           V++ VL A  ++ L N PP ++ R+
Sbjct: 396 YGSAGAGARRTDTAVRMVTSKKAG----------TVADLVLSASTTVWLPNTPPQLVFRY 445

Query: 449 LRE--HRSEWADNNIDVYSAAAIKVGP-CSLPGSRVGTFGSQVILPLAHTIEHEEFMEVI 505
           LR+   R EW     D + A++  V   CS+P   +   G+ V +  ++  +  +  + +
Sbjct: 446 LRDDQRRGEW-----DAFFASSAAVTELCSVPTGHLN--GNAVSVLYSNVTDGTDRKKTL 498

Query: 506 KLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDA-------SFADDAP- 557
            L+                  + C+        +C+ +++AP++        +  D A  
Sbjct: 499 ILQ------------------EACTD------ASCSMVVYAPVEEDSMRAVMNGGDHASV 534

Query: 558 -LLPSGFRIIPLDSGKETSSPN 578
            LLPSGF ++P   G+   +P+
Sbjct: 535 FLLPSGFAVLPDGHGRARHAPS 556


>gi|242049914|ref|XP_002462701.1| hypothetical protein SORBIDRAFT_02g030470 [Sorghum bicolor]
 gi|241926078|gb|EER99222.1| hypothetical protein SORBIDRAFT_02g030470 [Sorghum bicolor]
          Length = 872

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 42/189 (22%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE ++ ECP P   +R +L +      N+E +Q+K WFQNRR + K +
Sbjct: 126 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSKRL----NLESRQVKFWFQNRRTQMKTQ 181

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  ++       T+C   
Sbjct: 182 IERHE-----------NALLRQENDKLRA-------ENMTIREAMRNPIC----TNCGGA 219

Query: 137 VTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIV 196
              G+  L  QH          L I    L + L +    A +++        P S G  
Sbjct: 220 AVLGEVSLEEQH----------LRIENARLKDELDRVCALAGKFLGR------PISSGSS 263

Query: 197 AISHGCSGV 205
               GCSG+
Sbjct: 264 MSLQGCSGL 272


>gi|190349989|emb|CAQ63375.1| putative HD-ZIP IV family transcription factor OCL4 [Zea mays]
          Length = 881

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 11/103 (10%)

Query: 15  NGK---YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRC 71
           NGK   Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR 
Sbjct: 137 NGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRT 192

Query: 72  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
           + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 193 QMKAQQD----RADNVLLRAENESLKSDNYRLQAAIRNVVCPN 231


>gi|76782208|gb|ABA54874.1| baby boom interacting protein 1A [Brassica napus]
          Length = 718

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 17/123 (13%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           DG        +Y R+T +Q++ LE  + ECP P   +R QL RE      + P+QIK WF
Sbjct: 29  DGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDDKQRNQLSREL----GLAPRQIKFWF 84

Query: 67  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL---------VYENGYF 117
           QNRR + K + E    +A N  L A N  +  EN  +++ +            V E+ YF
Sbjct: 85  QNRRTQLKAQHE----RADNNALKAENDKIRCENIAIREAIKHAICPNCGGPPVNEDPYF 140

Query: 118 RQH 120
            +H
Sbjct: 141 DEH 143


>gi|449479674|ref|XP_004155671.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 549

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 100/435 (22%), Positives = 166/435 (38%), Gaps = 95/435 (21%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DGS  V + SL  ++  P +P  +        PSG LI+    
Sbjct: 188 LVPTRENYFVRYCKQQTDGSWAVADVSLDTLRPSP-IPNTRR------KPSGCLIQELPN 240

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNG- 357
           G S I  V+H++++   VP + R L  S      K  +A L RQ  + A  +  +   G 
Sbjct: 241 GYSKITWVEHVEVDETGVPTMYRTLVNSGLAFGAKRWVATLDRQSERFATSIATTIPTGD 300

Query: 358 -------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                   GR+  ++  L++R+   F   V   +   WT +     D+V V+   S D+ 
Sbjct: 301 LRVISSIEGRK--SMLKLAERMVTSFCAGVGASSVHAWTALPAAAGDEVRVVTRKSTDE- 357

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     V+ + A+     V P ++  FLR+   RSEW     D+ S   
Sbjct: 358 -----------PGRPPGVVLSAATSFWIPVSPKVVFDFLRKEKSRSEW-----DILSNGG 401

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
           +                   +  +AH          + L  V  +        +M +LQ 
Sbjct: 402 L-------------------VQEMAHIANGRHSGNCVSLLRVNSANSSQ---SNMLILQ- 438

Query: 529 CSGMDENAVGTCAELIFAPIDASF---------ADDAPLLPSGFRIIPLDSGKETSSPNR 579
               +     T + +I+AP+D             D   LLPSGF I+P D      +   
Sbjct: 439 ----ESCTDSTGSYVIYAPVDTVAMNVVLSGCDPDYVALLPSGFAILP-DGPGGGGNNGG 493

Query: 580 TLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSII 639
            +     LE+G  G               S++T+AF+   +S     ++  +   V S+I
Sbjct: 494 GI-----LELGSGG---------------SLITVAFQILVDSVPTARLSIGSVATVNSLI 533

Query: 640 S-SVQRVALALSPSN 653
             +V+R+  A+   N
Sbjct: 534 KCTVERIRAAVMREN 548


>gi|345193175|tpg|DAA34953.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414867891|tpg|DAA46448.1| TPA: outer cell layer4 isoform 1 [Zea mays]
 gi|414867892|tpg|DAA46449.1| TPA: outer cell layer4 isoform 2 [Zea mays]
          Length = 884

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 11/103 (10%)

Query: 15  NGK---YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRC 71
           NGK   Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR 
Sbjct: 137 NGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRT 192

Query: 72  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
           + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 193 QMKAQQD----RADNVLLRAENESLKSDNYRLQAAIRNVVCPN 231


>gi|190349991|emb|CAQ63376.1| putative HD-ZIP IV family transcription factor OCL4 [Zea mays]
          Length = 884

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 11/103 (10%)

Query: 15  NGK---YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRC 71
           NGK   Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR 
Sbjct: 137 NGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRT 192

Query: 72  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
           + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 193 QMKAQQD----RADNVLLRAENESLKSDNYRLQAAIRNVVCPN 231


>gi|218197780|gb|EEC80207.1| hypothetical protein OsI_22100 [Oryza sativa Indica Group]
          Length = 613

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
          +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 18 RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
           +R +   L+A N K+   N  + E
Sbjct: 74 HERADNCFLRAENDKIRCENIAIRE 98



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 96/235 (40%), Gaps = 32/235 (13%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERS--LKNIQNGPTMPPVQHFVRAEMLPSG 291
           L+ +T   P R+   +RY   +E G   + + S  L+   +    PP     R+  LPSG
Sbjct: 327 LHIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGAPPP-----RSRRLPSG 381

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
            LI     G S +  V+HM++E  S   VL R L  S         +AAL R   + A  
Sbjct: 382 CLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASL 441

Query: 350 VTQ------SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           V        + V   G+R  ++  LSQR+   F  ++       WT +       V V +
Sbjct: 442 VALGVPHHIAGVTPEGKR--SMMKLSQRMVNSFCSSLGASQMHQWTTLSGSNEVSVRVTM 499

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
           + S D             P   N V+ + A+ +   VP   +  F+R+   RS+W
Sbjct: 500 HRSTD-------------PGQPNGVVLSAATSIWLPVPCDHVFAFVRDENTRSQW 541


>gi|345195184|tpg|DAA34957.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413919601|gb|AFW59533.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 742

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 47  RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNH 102

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R+E S+L++ N KL A N
Sbjct: 103 HERQENSQLRSENEKLRAEN 122



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 134/351 (38%), Gaps = 75/351 (21%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL  ++ G  +       +    PSG LI+  
Sbjct: 373 SPLVPTRESYFVRYCKQNADGTWAVVDVSLDGLRPGAVL-------KCRRRPSGCLIQEM 425

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----MAQEVTQ 352
             G S +  V+H++++  SV  + + L  S      +  +  L RQ  +    MA  +  
Sbjct: 426 PNGYSKVTWVEHVEVDDRSVHSIYKLLVSSGLAFGARRWVGTLDRQCERLASVMASNIPT 485

Query: 353 SSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           S +    +  GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 486 SDIGVITSAEGRK--SMLKLAERMVMSFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVD 543

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 544 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEW-----DILSN 586

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                                V+  +AH     +    + L  V  +  +      M +L
Sbjct: 587 GG-------------------VVQEMAHIANGRDHGNCVSLLRVNSTNSNQ---SSMLIL 624

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
           Q  C+ M  + V      I+AP+D             D   LLPSGF I+P
Sbjct: 625 QESCTDMSGSYV------IYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 669


>gi|222635166|gb|EEE65298.1| hypothetical protein OsJ_20535 [Oryza sativa Japonica Group]
          Length = 575

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
          +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 18 RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
           +R +   L+A N K+   N  + E
Sbjct: 74 HERADNCFLRAENDKIRCENIAIRE 98



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 96/235 (40%), Gaps = 32/235 (13%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERS--LKNIQNGPTMPPVQHFVRAEMLPSG 291
           L+ +T   P R+   +RY   +E G   + + S  L+   +    PP     R+  LPSG
Sbjct: 327 LHIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGAPPP-----RSRRLPSG 381

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
            LI     G S +  V+HM++E  S   VL R L  S         +AAL R   + A  
Sbjct: 382 CLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASL 441

Query: 350 VTQ------SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           V        + V   G+R  ++  LSQR+   F  ++       WT +       V V +
Sbjct: 442 VALGVPHHIAGVTPEGKR--SMMKLSQRMVNSFCSSLGASQMHQWTTLSGSNEVSVRVTM 499

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
           + S D             P   N V+ + A+ +   VP   +  F+R+   RS+W
Sbjct: 500 HRSTD-------------PGQPNGVVLSAATSIWLPVPCDHVFAFVRDENTRSQW 541


>gi|162462576|ref|NP_001105126.1| OCL4 protein [Zea mays]
 gi|37051038|emb|CAB96424.2| OCL4 protein [Zea mays]
          Length = 808

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 11/103 (10%)

Query: 15  NGK---YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRC 71
           NGK   Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR 
Sbjct: 61  NGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRT 116

Query: 72  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
           + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 117 QMKAQQD----RADNVLLRAENESLKSDNYRLQAAIRNVVCPN 155


>gi|357166100|ref|XP_003580598.1| PREDICTED: homeobox-leucine zipper protein ROC2-like [Brachypodium
           distachyon]
          Length = 787

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 169/439 (38%), Gaps = 104/439 (23%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL  +Q           ++    PSG LI+  
Sbjct: 421 SPLVPTRESYFVRYCKQNSDGTWAVVDVSLDTLQG----------IKCRRRPSGCLIQEA 470

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----MAQEVTQ 352
             G S +  V+H++++  SV  + + L  S      +  + AL RQ  +    MA  +  
Sbjct: 471 PNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGALGRQCERLASVMASNIPN 530

Query: 353 SSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           S +    +  G++  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 531 SDIGVITSSEGKK--SMLKLAERMVASFCGGVTASVAHQWTRLSGSGAEDVRVMTRQSVD 588

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RS+W     D+ S 
Sbjct: 589 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDETSRSQW-----DILSN 631

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                                V+  +AH     +    + L  V  +  +     +M +L
Sbjct: 632 GG-------------------VVQEMAHIANGRDHGNCVSLLRVNSTNSNQ---SNMLIL 669

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSS 576
           Q  C+    +A G+   +I+AP+D             D   LLPSGF I+P         
Sbjct: 670 QESCT----DASGSY--VIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP--------- 714

Query: 577 PNRTLDLASALEIGPAGNRATNN----YSTNSTCMRSVMTIAFEFAFESHMQEHVATMAR 632
                        GPAGN  T               S++T+AF+   +S     ++  + 
Sbjct: 715 ------------DGPAGNIHTGGGPSVSDGGVGSGGSLLTVAFQILVDSVPTAKLSLGSV 762

Query: 633 QYVRSIIS-SVQRVALALS 650
             V S+I+ +V+R+  A+S
Sbjct: 763 ATVNSLIACTVERIKAAVS 781



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  Y EC  P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 115 RYHRHTQHQIQEMEAFYKECQHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQTKNQ 170

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S+L+  N KL A N
Sbjct: 171 QERHENSQLRGENDKLRAEN 190


>gi|115467006|ref|NP_001057102.1| Os06g0208100 [Oryza sativa Japonica Group]
 gi|31339109|dbj|BAC77161.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113595142|dbj|BAF19016.1| Os06g0208100, partial [Oryza sativa Japonica Group]
          Length = 129

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
          +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 4  RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 59

Query: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
           +R +   L+A N K+   N  + E
Sbjct: 60 HERADNCFLRAENDKIRCENIAIRE 84


>gi|242077254|ref|XP_002448563.1| hypothetical protein SORBIDRAFT_06g029270 [Sorghum bicolor]
 gi|241939746|gb|EES12891.1| hypothetical protein SORBIDRAFT_06g029270 [Sorghum bicolor]
          Length = 789

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 112 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 167

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S+L+A N KL A N
Sbjct: 168 HERHENSQLRAENEKLRAEN 187



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 95/435 (21%), Positives = 164/435 (37%), Gaps = 99/435 (22%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DGS  V + SL +++    +       +    PSG LI+  
Sbjct: 425 SPLVPTRESYFVRYCKQNADGSWAVVDVSLDSLRPNSVL-------KCRRRPSGCLIQEM 477

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSV-- 355
             G S +  V+H++++  SV  + + L  S         +  L    +    V  S++  
Sbjct: 478 PNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGPPRWVGTLDPQCEPLPSVMPSTIPT 537

Query: 356 -------NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
                  +  GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 538 SDMGVITSTEGRK--SMLKLAERMVMSFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVD 595

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 596 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEW-----DILSN 638

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                                V+  +AH     +    + L  V  +  +     +M +L
Sbjct: 639 GG-------------------VVQEMAHIANGRDHGNCVSLLRVNSTNSNQ---SNMLIL 676

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSS 576
           Q  C+    +A G+   +I+AP+D             D   LLPSGF I+P         
Sbjct: 677 QESCT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP--------- 721

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
                        GPAG+              S++T+AF+   +S     ++  +   V 
Sbjct: 722 ------------DGPAGSNM--QGDGGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVN 767

Query: 637 SIIS-SVQRVALALS 650
           S+I+ +V+R+  A+S
Sbjct: 768 SLIACTVERIKAAVS 782


>gi|449485525|ref|XP_004157198.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 783

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           KY R+TP Q++ LE  + ECP P   +R +L R       +E KQ+K WFQNRR + K  
Sbjct: 89  KYHRHTPHQIQELEIFFKECPHPDDKQRNELSRRL----GLETKQVKFWFQNRRTQMKTQ 144

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+  N KL A N ++ +
Sbjct: 145 IERHENAILKQENDKLRAENSVMKD 169



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 103/449 (22%), Positives = 170/449 (37%), Gaps = 101/449 (22%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R    LR+     DG   V + S+    N         F   + LPSG
Sbjct: 408 AELRVLSPLVPVRTLKFLRFCKQHADGLWAVVDVSIGEGSNS------NSFSGCKRLPSG 461

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEV 350
            +++    G S +  V+H + +   + ++ R L  S +    +  +A L RQ   +A  +
Sbjct: 462 CVVQDMPNGFSKVTWVEHTEYDETVIHQLYRQLISSGSGFGSQRWLATLQRQCDCLAILM 521

Query: 351 TQS-------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT--VMGNDGMDDVTV 401
           + +        ++  GRR  ++  LSQR+   F   V   T   W   V+GN   +DV V
Sbjct: 522 SSTIPTEDPAGISPSGRR--SMLKLSQRMVDNFCSGVCSSTLHKWDKLVVGNIS-EDVKV 578

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S +             P     ++ + A+ +   V    L  FL++   RSEW   
Sbjct: 579 MARKSIND------------PGEPPGIVLSAATSVWMPVTQQRLFAFLQDECLRSEW--- 623

Query: 460 NIDVYSAA-----AIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
             D+ S +      +++     P +RV        L  A+ +   E              
Sbjct: 624 --DILSNSRPMLEMLRISKSQGPDNRVS-------LLCANPMNANE-------------- 660

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAEL-IFAPIDASF-------ADDA--PLLPSGFR 564
                   MF+LQ      E        L +FAP+D S         D A   LLPSGF 
Sbjct: 661 ------NTMFILQ------ETWTDVSGSLVVFAPVDTSSVNLVMRGGDSAYVSLLPSGFA 708

Query: 565 IIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQ 624
           I+P+D      +      + S++  G  G            C+   +T+AF+    S   
Sbjct: 709 ILPIDQSNYACTNGEDATVKSSINSGHGG-----------ACL---LTVAFQILVNSLPT 754

Query: 625 EHVATMARQYVRSIIS-SVQRVALALSPS 652
             +   + + V  +IS ++Q++  AL  S
Sbjct: 755 AKLTVESVETVNHLISCTIQKIKTALQVS 783


>gi|449446049|ref|XP_004140784.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 783

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           KY R+TP Q++ LE  + ECP P   +R +L R       +E KQ+K WFQNRR + K  
Sbjct: 89  KYHRHTPHQIQELEIFFKECPHPDDKQRNELSRRL----GLETKQVKFWFQNRRTQMKTQ 144

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+  N KL A N ++ +
Sbjct: 145 IERHENAILKQENDKLRAENSVMKD 169



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 103/449 (22%), Positives = 170/449 (37%), Gaps = 101/449 (22%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R    LR+     DG   V + S+    N         F   + LPSG
Sbjct: 408 AELRVLSPLVPVRTLKFLRFCKQHADGLWAVVDVSIGEGSNS------NSFSGCKRLPSG 461

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEV 350
            +++    G S +  V+H + +   + ++ R L  S +    +  +A L RQ   +A  +
Sbjct: 462 CVVQDMPNGFSKVTWVEHTEYDETVIHQLYRQLISSGSGFGSQRWLATLQRQCDCLAILM 521

Query: 351 TQS-------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT--VMGNDGMDDVTV 401
           + +        ++  GRR  ++  LSQR+   F   V   T   W   V+GN   +DV V
Sbjct: 522 SSTIPTEDPAGISPSGRR--SMLKLSQRMVDNFCSGVCSSTLHKWDKLVVGNIS-EDVKV 578

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S +             P     ++ + A+ +   V    L  FL++   RSEW   
Sbjct: 579 MARKSIND------------PGEPPGIVLSAATSVWMPVTQQRLFAFLQDECLRSEW--- 623

Query: 460 NIDVYSAA-----AIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
             D+ S +      +++     P +RV        L  A+ +   E              
Sbjct: 624 --DILSNSRPMLEMLRISKSQGPDNRVS-------LLCANPMNANE-------------- 660

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAEL-IFAPIDASF-------ADDA--PLLPSGFR 564
                   MF+LQ      E        L +FAP+D S         D A   LLPSGF 
Sbjct: 661 ------NTMFILQ------ETWTDVSGSLVVFAPVDTSSVNLVMRGGDSAYVSLLPSGFA 708

Query: 565 IIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQ 624
           I+P+D      +      + S++  G  G            C+   +T+AF+    S   
Sbjct: 709 ILPIDQSNYACTNGEDATVKSSINSGHGG-----------ACL---LTVAFQILVNSLPT 754

Query: 625 EHVATMARQYVRSIIS-SVQRVALALSPS 652
             +   + + V  +IS ++Q++  AL  S
Sbjct: 755 AKLTVESVETVNHLISCTIQKIKAALQVS 783


>gi|293332723|ref|NP_001170002.1| uncharacterized protein LOC100383907 [Zea mays]
 gi|224032821|gb|ACN35486.1| unknown [Zea mays]
          Length = 418

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 152/382 (39%), Gaps = 92/382 (24%)

Query: 244 RDFWLLRYTSVLEDGSLVVCERSLKNI-----------------QNGPTMPPVQHFVRAE 286
           R    LRYT  + +G   V + S+  I                  NG T+ P   +    
Sbjct: 15  RSINFLRYTKRVAEGRWAVMDVSVDGILGPPGSRVADAAAAAAAANGVTLVPAW-YTGCR 73

Query: 287 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ 345
           +LPSG L+     G   +  V H + +  +VP + RPL+ S   L     +A+L RQ   
Sbjct: 74  LLPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPLFRSGKALGAHRWLASLQRQCEF 133

Query: 346 MA----------QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNG-------FTDEGW 388
           +A           + T ++++  G+R   +  L+QR+   F  AV+G         DE W
Sbjct: 134 LAVLHSSQVSRGGDNTAAAISSMGKR--GVLELAQRMVADFYSAVSGPVTQPSSSIDE-W 190

Query: 389 TVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRF 448
                 G       V     K  G           V++ VL A  ++ L N PP ++ R+
Sbjct: 191 YGSAGAGARRTDTAVRMVTSKKAG----------TVADLVLSASTTVWLPNTPPQLVFRY 240

Query: 449 LRE--HRSEWADNNIDVYSAAAIKVGP-CSLPGSRVGTFGSQVILPLAHTIEHEEFMEVI 505
           LR+   R EW     D + A++  V   CS+P   +   G+ V +  ++  +  +  + +
Sbjct: 241 LRDDQRRGEW-----DAFFASSAAVTELCSVPTGHLN--GNAVSVLYSNVTDGTDRKKTL 293

Query: 506 KLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDA-------SFADDAP- 557
            L+                  + C+        +C+ +++AP++        +  D A  
Sbjct: 294 ILQ------------------EACTD------ASCSMVVYAPVEEDSMRAVMNGGDHASV 329

Query: 558 -LLPSGFRIIPLDSGKETSSPN 578
            LLPSGF ++P   G+   +P+
Sbjct: 330 FLLPSGFAVLPDGHGRARHAPS 351


>gi|15220448|ref|NP_172015.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|30679181|ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|334182300|ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|75332091|sp|Q94C37.1|HDG2_ARATH RecName: Full=Homeobox-leucine zipper protein HDG2; AltName:
           Full=HD-ZIP protein HDG2; AltName: Full=Homeodomain
           GLABRA 2-like protein 2; AltName: Full=Homeodomain
           transcription factor HDG2; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 2
 gi|14334996|gb|AAK59762.1| At1g05230/YUP8H12_16 [Arabidopsis thaliana]
 gi|20147145|gb|AAM10289.1| At1g05230/YUP8H12_16 [Arabidopsis thaliana]
 gi|222423025|dbj|BAH19495.1| AT1G05230 [Arabidopsis thaliana]
 gi|332189688|gb|AEE27809.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189689|gb|AEE27810.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189691|gb|AEE27812.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
          Length = 721

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R+QL RE     N+EP Q+K WFQN+R + K  
Sbjct: 67  RYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSREL----NLEPLQVKFWFQNKRTQMKNH 122

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S L+A N KL   N
Sbjct: 123 HERHENSHLRAENEKLRNDN 142



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 144/368 (39%), Gaps = 76/368 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           SA     + L P R+ +  RY     DGS  V + SL ++Q     PP +   RA    S
Sbjct: 357 SAEFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQ---PNPPARCRRRA----S 409

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ---- 345
           G LI+    G S +  V+H++++   V  + + +  +      K  +A L RQ  +    
Sbjct: 410 GCLIQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASV 469

Query: 346 MAQEVTQSSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
           MA  ++   V    N  GRR  ++  L++R+   F   V+  T   WT +   G +DV V
Sbjct: 470 MATNISSGEVGVITNQEGRR--SMLKLAERMVISFCAGVSASTAHTWTTLSGTGAEDVRV 527

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S D             P     ++ + A+     VPP  +  FLR+   R+EW   
Sbjct: 528 MTRKSVDD------------PGRPPGIVLSAATSFWIPVPPKRVFDFLRDENSRNEW--- 572

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S                      V+  +AH     +    + L  V  +      
Sbjct: 573 --DILSNGG-------------------VVQEMAHIANGRDTGNCVSLLRVNSANSSQ-- 609

Query: 520 PRDMFLLQ-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLD 569
             +M +LQ  C+        T + +I+AP+D             D   LLPSGF I+P D
Sbjct: 610 -SNMLILQESCTD------PTASFVIYAPVDIVAMNIVLNGGDPDYVALLPSGFAILP-D 661

Query: 570 SGKETSSP 577
               + +P
Sbjct: 662 GNANSGAP 669


>gi|224136964|ref|XP_002322460.1| predicted protein [Populus trichocarpa]
 gi|222869456|gb|EEF06587.1| predicted protein [Populus trichocarpa]
          Length = 748

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           KY R+T  Q++ LE  + ECP P   +R +L R       +E KQIK WFQNRR + K  
Sbjct: 55  KYNRHTANQIQELESFFKECPHPDEKQRSELSRRL----GLESKQIKFWFQNRRTQMKTQ 110

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+  N KL A N+LL +
Sbjct: 111 LERHENAILRQENDKLRAENELLKQ 135


>gi|22475197|gb|AAM97322.1| homeodomain protein GhHOX2 [Gossypium hirsutum]
          Length = 775

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 8/102 (7%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           L   +Y R+T  Q++ LE ++ ECP P   +R +L +E      ++P+Q+K WFQNRR +
Sbjct: 86  LKKKRYHRHTAHQIQELEAVFKECPHPDDKQRMKLSQEL----GLKPRQVKFWFQNRRTQ 141

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
            K +++ S     N  L A N  L  E  RLQ ++S+LV  N
Sbjct: 142 MKAQQDRSE----NGILRAENDSLKSEFYRLQAELSKLVCPN 179



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 12/178 (6%)

Query: 232 AILYALTTLAPARDFWLLRY---TSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
           A L+ L+ L P R+ + LRY    +V ++    + +  L    N         F   +  
Sbjct: 389 AELHVLSPLVPTREAYFLRYCQQQNVEDETYWAIVDFPLDGFHNSLQT----SFPLYKRR 444

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQ 348
           PSG LI+    G S +  V+H ++E   + ++      S         +A L +  +   
Sbjct: 445 PSGCLIQDMPNGYSRVTWVEHAEIEEKPIHQIFSHFVHSGMAFGANRWLAVLERQCERVA 504

Query: 349 EVTQSSVNGWGRRPAA-----LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
            +  +++   G  P+      L  LSQR+ R F   ++  + + WT + +   D V +
Sbjct: 505 SLMATNIPDIGVIPSPEARKNLMRLSQRMIRTFCVNISSCSGQVWTAVPDSTDDTVRI 562


>gi|345193173|tpg|DAA34952.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414886368|tpg|DAA62382.1| TPA: outer cell layer3 [Zea mays]
          Length = 863

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE ++ ECP P   +R +L +      N+E +Q+K WFQNRR + K  
Sbjct: 123 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSKRL----NLESRQVKFWFQNRRTQMKTQ 178

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+  N KL A N  + E
Sbjct: 179 IERHENALLRQENDKLRAENMTIRE 203



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 24/175 (13%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI----------QNGPTMPPVQH 281
           A L  L+ L P R+   LR+     +G   V + S+  I          QNG        
Sbjct: 453 AELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAILRPDGGHHHAQNGGGA----G 508

Query: 282 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL- 340
           ++   +LP+G +++    G S +  V H + +   V ++ RPL +S   L  +  +A+L 
Sbjct: 509 YMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDEAVVHQLYRPLLQSGQALGARRWLASLQ 568

Query: 341 RQLRQMAQEVTQS-------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW 388
           RQ + +A   + S       ++   GRR  ++  L+QR++  F   V     + W
Sbjct: 569 RQCQYLAILCSNSLPARDHAAITPVGRR--SMLKLAQRMTDNFCAGVCASAAQKW 621


>gi|162462506|ref|NP_001105125.1| outer cell layer3 [Zea mays]
 gi|8920423|emb|CAB96423.1| OCL3 protein [Zea mays]
          Length = 863

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE ++ ECP P   +R +L +      N+E +Q+K WFQNRR + K  
Sbjct: 123 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSKRL----NLESRQVKFWFQNRRTQMKTQ 178

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+  N KL A N  + E
Sbjct: 179 IERHENALLRQENDKLRAENMTIRE 203



 Score = 40.4 bits (93), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 24/175 (13%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI----------QNGPTMPPVQH 281
           A L  L+ L P R+   LR+      G   V + S+  I          QNG        
Sbjct: 453 AELQVLSPLVPIREVVFLRFCKQHAKGLWAVVDVSVDAILRPDGGHHHAQNGGGA----G 508

Query: 282 FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL- 340
           ++   +LP+G +++    G S +  V H + +   V ++ RPL +S   L  +  +A+L 
Sbjct: 509 YMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDEAVVHQLYRPLLQSGQALGARRWLASLQ 568

Query: 341 RQLRQMAQEVTQS-------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW 388
           RQ + +A   + S       ++   GRR  ++  L+QR++  F   V     + W
Sbjct: 569 RQCQYLAILCSNSLPARDHAAITPVGRR--SMLKLAQRMTDNFCAGVCASAAQKW 621


>gi|115447877|ref|NP_001047718.1| Os02g0674800 [Oryza sativa Japonica Group]
 gi|75121322|sp|Q6EPF0.1|ROC5_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC5; AltName:
           Full=GLABRA 2-like homeobox protein 5; AltName:
           Full=HD-ZIP protein ROC5; AltName: Full=Homeodomain
           transcription factor ROC5; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 5
 gi|50253214|dbj|BAD29470.1| GL2-type homeobox genes [Oryza sativa Japonica Group]
 gi|113537249|dbj|BAF09632.1| Os02g0674800 [Oryza sativa Japonica Group]
 gi|222623431|gb|EEE57563.1| hypothetical protein OsJ_07908 [Oryza sativa Japonica Group]
          Length = 804

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 26/132 (19%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE L+ ECP P   +R +L R      +++ +Q+K WFQNRR + K +
Sbjct: 101 RYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL----SLDARQVKFWFQNRRTQMKTQ 156

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  +S        SC S 
Sbjct: 157 LERHE-----------NALLKQENDKLRA-------ENMTIREAMRSPMCG----SCGSP 194

Query: 137 VTSGQHHLTPQH 148
              G+  L  QH
Sbjct: 195 AMLGEVSLEEQH 206



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 32/242 (13%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI--QNGPTMPPVQHFVRAEMLP 289
           A L  L+ L P R+   LR+   L +G+  V + S+  +   +     P    V+   +P
Sbjct: 430 AELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGNVKCRRVP 489

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQ 348
           SG +++    G   +  V+H + +  SV ++ RPL  S      +  +A L RQ   +A 
Sbjct: 490 SGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCECLAI 549

Query: 349 EVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM----GNDGM 396
            ++ ++V           G+R  ++  L++R++  F   V+  +   W+ +    G+ G 
Sbjct: 550 LMSSATVTANDSTAISQEGKR--SMLKLARRMTENFCAGVSASSAREWSKLDGATGSIG- 606

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RS 454
           +DV V+   S  +            P     V+ + A+ +   V P  L  FLR+   R+
Sbjct: 607 EDVRVMARKSVSE------------PGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRA 654

Query: 455 EW 456
           EW
Sbjct: 655 EW 656


>gi|218191344|gb|EEC73771.1| hypothetical protein OsI_08446 [Oryza sativa Indica Group]
          Length = 804

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 26/132 (19%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE L+ ECP P   +R +L R      +++ +Q+K WFQNRR + K +
Sbjct: 101 RYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL----SLDARQVKFWFQNRRTQMKTQ 156

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  +S        SC S 
Sbjct: 157 LERHE-----------NALLKQENDKLRA-------ENMTIREAMRSPMCG----SCGSP 194

Query: 137 VTSGQHHLTPQH 148
              G+  L  QH
Sbjct: 195 AMLGEVSLEEQH 206



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 32/242 (13%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI--QNGPTMPPVQHFVRAEMLP 289
           A L  L+ L P R+   LR+   L +G+  V + S+  +   +     P    V+   +P
Sbjct: 430 AELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGNVKCRRVP 489

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQ 348
           SG +++    G   +  V+H + +  SV ++ RPL  S      +  +A L RQ   +A 
Sbjct: 490 SGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCECLAI 549

Query: 349 EVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM----GNDGM 396
            ++ ++V           G+R  ++  L++R++  F   V+  +   W+ +    G+ G 
Sbjct: 550 LMSSATVTANDSTAISQEGKR--SMLKLARRMTENFCAGVSASSAREWSKLDGATGSIG- 606

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RS 454
           +DV V+   S  +            P     V+ + A+ +   V P  L  FLR+   R+
Sbjct: 607 EDVRVMARKSVSE------------PGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRA 654

Query: 455 EW 456
           EW
Sbjct: 655 EW 656


>gi|31339103|dbj|BAC77158.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 790

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 26/132 (19%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE L+ ECP P   +R +L R      +++ +Q+K WFQNRR + K +
Sbjct: 87  RYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL----SLDARQVKFWFQNRRTQMKTQ 142

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  +S        SC S 
Sbjct: 143 LERHE-----------NALLKQENDKLRA-------ENMTIREAMRSPMCG----SCGSP 180

Query: 137 VTSGQHHLTPQH 148
              G+  L  QH
Sbjct: 181 AMLGEVSLEEQH 192



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 32/242 (13%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI--QNGPTMPPVQHFVRAEMLP 289
           A L  L+ L P R+   LR+   L +G+  V + S+  +   +     P    V+   +P
Sbjct: 416 AELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGNVKCRRVP 475

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQ 348
           SG +++    G   +  V+H + +  SV ++ RPL  S      +  +A L RQ   +A 
Sbjct: 476 SGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCECLAI 535

Query: 349 EVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM----GNDGM 396
            ++ ++V           G+R  ++  L++R++  F   V+  +   W+ +    G+ G 
Sbjct: 536 LMSSATVTANDSTAISQEGKR--SMLKLARRMTENFCAGVSASSAREWSKLDGATGSIG- 592

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RS 454
           +DV V+   S  +            P     V+ + A+ +   V P  L  FLR+   R+
Sbjct: 593 EDVRVMARKSVSE------------PGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRA 640

Query: 455 EW 456
           EW
Sbjct: 641 EW 642


>gi|302763529|ref|XP_002965186.1| hypothetical protein SELMODRAFT_230527 [Selaginella moellendorffii]
 gi|300167419|gb|EFJ34024.1| hypothetical protein SELMODRAFT_230527 [Selaginella moellendorffii]
          Length = 745

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 29/117 (24%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E L+ ECP P   +RQ+L RE      +EP+Q+K WFQNRR + K +
Sbjct: 50  RYHRHTARQIQEMESLFKECPHPDDKQRQELSREL----GLEPRQVKFWFQNRRTQLKAQ 105

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
           +E +                  EN+ L+ +V +L  EN   R+       A ++ SC
Sbjct: 106 QERA------------------ENNVLRHEVEKLRAENITMRE-------AIRNASC 137



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 107/448 (23%), Positives = 185/448 (41%), Gaps = 97/448 (21%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A + AL+ L   R+ + LRY    +D +  V + S+  +   P+ P   H  R+   PSG
Sbjct: 367 AEIQALSPLMQTREVYFLRYCKQHQDSTWAVVDVSVDGLHGTPS-PASLHCRRS---PSG 422

Query: 292 YLIRPCE-------GGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQL 343
            LI+           G S + +V+HM+ +   V ++ + L  S      +  +A L RQ 
Sbjct: 423 MLIQDMPDSIHDMPNGCSKVVVVEHMEYDDQPVHQLFKSLVSSGGAFGARKWLATLQRQC 482

Query: 344 RQMAQEV----TQSSVNGWGRRPA--ALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
             +   +    +   +      PA  +L  LSQR++  F   V G     WT +     D
Sbjct: 483 EALTCYLPGLASAREIGVIPNSPARQSLLKLSQRMTTNFCAGV-GAPSSQWTTLSGSVHD 541

Query: 398 DVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR-EH-RSE 455
           D+ V+   S D             P   + ++ + A+ L   + PA +  +LR EH RSE
Sbjct: 542 DIRVMTRKSVDN------------PGEPHGIVLSAATTLWLPLAPARVFDYLRSEHLRSE 589

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           W DN+  V   A I  G  +  G+ V  F    I  L  T+                   
Sbjct: 590 W-DNSGMVQEVARIAKGQAT--GNDVSLFR---IDALNQTL------------------- 624

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRII 566
           +A   + +FL + C+    +A G+   +++AP++ +  +            +LPSGF I+
Sbjct: 625 NANQNQMLFLQESCT----DASGSL--VVYAPVELTMINMMIQGGDPAHVAVLPSGFVIL 678

Query: 567 PLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEH 626
           P     + S P+ T  +          N AT           +++T+A +    +     
Sbjct: 679 P-----DGSEPHSTTSILQ--------NDATG----------TLLTVAVQILISTLPSAK 715

Query: 627 VATMARQYVRSIIS-SVQRVALALSPSN 653
           ++  +   + ++IS +VQ+V  AL+PSN
Sbjct: 716 LSLDSIVAINTLISNTVQKVKGALTPSN 743


>gi|164708731|gb|ABY67263.1| homeodomain protein HOX2 [Gossypium arboreum]
          Length = 737

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 8/102 (7%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           L   +Y R+T  Q++ LE ++ ECP P   +R +L +E      ++P+Q+K WFQNRR +
Sbjct: 86  LKKKRYHRHTAHQIQELEAVFKECPHPDDKQRMKLSQEL----GLKPRQVKFWFQNRRTQ 141

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
            K +++ S     N  L A N  L  E  RLQ ++S+LV  N
Sbjct: 142 MKAQQDRSE----NVILRAENDSLKSEFYRLQAELSKLVCPN 179



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 13/179 (7%)

Query: 232 AILYALTTLAPARDFWLLRY---TSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
           A L+ L+ L P R+ + LRY    +V ++    + +  L    N         F   +  
Sbjct: 389 AELHVLSPLVPTREAYFLRYCQQQNVEDETYWAIVDFPLDGFHNSLQT----SFPLYKRR 444

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQ 348
           PSG LI+    G S +  V+H ++E   + ++      S         +A L +  +   
Sbjct: 445 PSGCLIQDMPNGYSRVTWVEHSEIEEKPIHQIFSHFVHSGMAFGANCWLAVLERQCERIA 504

Query: 349 EVTQSSVNGWGRRPAA-----LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
            +  +++   G  P+      +  LSQR+ R F   ++  + + WT +  D  DD  ++
Sbjct: 505 SLMATNIPDIGVIPSPDARKNIMRLSQRMIRTFCVNISSCSGQVWTAVP-DSSDDTVII 562


>gi|302757697|ref|XP_002962272.1| hypothetical protein SELMODRAFT_140884 [Selaginella moellendorffii]
 gi|109729918|tpg|DAA05773.1| TPA_inf: class IV HD-Zip protein HDZ43 [Selaginella moellendorffii]
 gi|300170931|gb|EFJ37532.1| hypothetical protein SELMODRAFT_140884 [Selaginella moellendorffii]
          Length = 745

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 29/117 (24%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E L+ ECP P   +RQ+L RE      +EP+Q+K WFQNRR + K +
Sbjct: 50  RYHRHTARQIQEMESLFKECPHPDDKQRQELSREL----GLEPRQVKFWFQNRRTQLKAQ 105

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
           +E +                  EN+ L+ +V +L  EN   R+       A ++ SC
Sbjct: 106 QERA------------------ENNVLRHEVEKLRAENITMRE-------AIRNASC 137



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 182/448 (40%), Gaps = 97/448 (21%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A + AL+ L   R+ + LRY    +D +  V + S+  +   P+ P   H  R+   PSG
Sbjct: 367 AEIQALSPLMQTREVYFLRYCKQHQDSTWAVVDVSVDGLHGTPS-PASLHCRRS---PSG 422

Query: 292 YLIRPCE-------GGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQL 343
            LI+           G S + +V+HM+ +   V ++ + L  S      +  +A L RQ 
Sbjct: 423 MLIQDMPDSIHDMPNGCSKVVVVEHMEYDDQPVHQLFKSLVSSGGAFGARKWLATLQRQC 482

Query: 344 RQMAQEV----TQSSVNGWGRRPA--ALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
             +   +    +   +      PA  +L  LSQR++  F   V G     WT +     D
Sbjct: 483 EALTCYLPGLASAREIGVIPNSPARQSLLKLSQRMTTNFCAGV-GAPSSQWTTLSGSVHD 541

Query: 398 DVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR-EH-RSE 455
           D+ V+   S D             P   + ++ + A+ L   + PA +  +LR EH RSE
Sbjct: 542 DIRVMTRKSVDN------------PGEPHGIVLSAATTLWLPLAPARVFDYLRSEHLRSE 589

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           W DN+  V   A I  G  +  G+ V  F    I  L  T+                   
Sbjct: 590 W-DNSGMVQEVARIAKGQAT--GNDVSLFR---IDALNQTL------------------- 624

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRII 566
           +A   + +FL + C+    + V      ++AP++ +  +            +LPSGF I+
Sbjct: 625 NANQNQMLFLQESCTDTSGSLV------VYAPVELTMINMMIQGGDPAHVAVLPSGFVIL 678

Query: 567 PLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEH 626
           P     + S P+ T  +          N AT           +++T+A +    +     
Sbjct: 679 P-----DGSEPHSTTSILQ--------NDATG----------TLLTVAVQILISTLPSAK 715

Query: 627 VATMARQYVRSIIS-SVQRVALALSPSN 653
           ++  +   + ++IS +VQ+V  AL+PSN
Sbjct: 716 LSLDSIVAINTLISNTVQKVKGALTPSN 743


>gi|326525158|dbj|BAK07849.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 685

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
          +Y R+TP Q++ LE ++ ECP P   +R  L RE      +EP+QIK WFQNRR + K  
Sbjct: 19 RYHRHTPRQIQQLEAMFKECPHPDENQRMHLSREL----GLEPRQIKFWFQNRRTQMKAQ 74

Query: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
           +R +   L+A N K+   N  + E
Sbjct: 75 HERADNCFLRAENDKIRCENIAMRE 99



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 150/370 (40%), Gaps = 85/370 (22%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSL---KNIQNGPTMPPVQHFVRAEMLPS 290
           L+ ++ + P R+F  LRY   +E G   + + S+   ++ + G   PP     R+  LPS
Sbjct: 324 LHVMSPVVPTREFCFLRYCRQIEQGLWAIADVSVDLQRDARYG--APPA----RSRRLPS 377

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQ 348
           G LI     G S +  V+HM+ E  + + ++ R L  S         +AAL R   + A 
Sbjct: 378 GCLIADMSNGYSKVTWVEHMETEDKTPINQLYRDLVLSGAAFGAHRWLAALQRACERHAC 437

Query: 349 EVTQ-----SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM-----GNDGMDD 398
            VT      + V   G+R  ++  LSQR+   F  +++      WT +     G D    
Sbjct: 438 LVTPPHRDIAGVTLEGKR--SMMRLSQRMVGSFCASLSASQQHRWTTLSGPGAGVDEAAG 495

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
           V V+V+ S D             P   + V+ + A+ +   VP   +  F+R+   RS+W
Sbjct: 496 VRVMVHRSTD-------------PGQPSGVVLSAATSIWLPVPCDRVFAFVRDENTRSQW 542

Query: 457 ADNNIDVYSAAAIKVGPCSLP-GSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
                DV S          +P GS  G                     +  L G+  S  
Sbjct: 543 -----DVLSHGNPVQEVSRIPNGSHPGN-------------------SISLLRGLNASQN 578

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRII 566
                  M +LQ     +  A  + + +++APID   A+           PLLPSGF I+
Sbjct: 579 ------SMLILQ-----ESCADASGSLVVYAPIDLPAANVVMSGEDPSAIPLLPSGFTIL 627

Query: 567 PLDSGKETSS 576
           P   G+ +SS
Sbjct: 628 P--DGRASSS 635


>gi|449454480|ref|XP_004144982.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
 gi|449473159|ref|XP_004153804.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
 gi|449522284|ref|XP_004168157.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 841

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 105/439 (23%), Positives = 176/439 (40%), Gaps = 78/439 (17%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+     +G   V + S+  ++  PT      F     LPSG
Sbjct: 456 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDAMRETPTGGG-SSFGNCRRLPSG 514

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL-AQKTTMAALRQLRQMAQEV 350
            +++    G S +  V+H + +   V ++ RPL  S     AQ+      RQ   +A  +
Sbjct: 515 CVVQDMPNGYSKVTWVEHAEYDDSQVHQLYRPLLSSGMGFGAQRWVTTLQRQCECLAILM 574

Query: 351 T-------QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVL 402
           +        +++   GRR  ++  L+QR++  F   V   T   W  +    +D DV V+
Sbjct: 575 SSAVPIRDHTAITAGGRR--SMLKLAQRMTANFCAGVCASTVHKWNKLNAGSVDEDVRVM 632

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
              S D             P     ++ + A+ +   V P  L  FLR+   RSEW    
Sbjct: 633 TRKSVDD------------PGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEW---- 676

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            D+ S      GP               +  +AH  + ++    + L  +  S  +A   
Sbjct: 677 -DILSNG----GP---------------MQEMAHIAKGQDHGNCVSL--LRASAMNANQS 714

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLDSG 571
             + L + C     +A G+   +++AP+D        +  D A   LLPSGF I+P   G
Sbjct: 715 SMLILQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP--DG 766

Query: 572 KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMA 631
             T     T   + +   GP   RA            S++T+AF+    S     +   +
Sbjct: 767 AVTGGLTATNGSSPSGGEGPQSQRAAGGG--------SLLTVAFQILVNSLPTAKLTVES 818

Query: 632 RQYVRSIIS-SVQRVALAL 649
            + V ++IS +VQ++  AL
Sbjct: 819 VETVNNLISCTVQKIKAAL 837



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 17/91 (18%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREKQ 75
           +Y R+TP+Q++ LE ++ ECP P   +R +L R  C     +E +Q+K WFQNRR + K 
Sbjct: 137 RYHRHTPQQIQELEAVFKECPHPDEKQRLELSRRLC-----LETRQVKFWFQNRRTQMKT 191

Query: 76  RKEASRLQAVNRKLTAMNKLLMEENDRLQKQ 106
           + E              N LL +END+L+ +
Sbjct: 192 QLERHE-----------NTLLRQENDKLRAE 211


>gi|242095072|ref|XP_002438026.1| hypothetical protein SORBIDRAFT_10g006820 [Sorghum bicolor]
 gi|241916249|gb|EER89393.1| hypothetical protein SORBIDRAFT_10g006820 [Sorghum bicolor]
          Length = 700

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 8/108 (7%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           +G        +Y R+TP Q++ LE ++ ECP P   +R  L RE      +EP+QIK WF
Sbjct: 8   EGSDSQRQRKRYHRHTPRQIQQLEAMFKECPHPDENQRAALSREL----GLEPRQIKFWF 63

Query: 67  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
           QNRR + K + E    +A N  L A N  +  EN  +++ +  ++  N
Sbjct: 64  QNRRTQMKAQHE----RADNCFLRAENDKIRCENITMREALKNVICPN 107



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 144/362 (39%), Gaps = 88/362 (24%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           L+ +T + P R+   LRY   +E G   + + SL   ++     P     R+  +PSG L
Sbjct: 329 LHIMTPVVPTRELSFLRYCKQIEQGLWAIADVSLDGQRDAHYGMPS----RSRRMPSGCL 384

Query: 294 IRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQKTTMAAL-RQLRQMAQEVT 351
           I     G S +  V+HM++E      VL R L  S         +AAL R   + A   T
Sbjct: 385 IADMSNGYSKVTWVEHMEIEQMLPINVLYRNLVLSGAAFGAHRWLAALQRACERFASVAT 444

Query: 352 Q-------SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
                   + V   G+R  ++  LSQR+   F  +++    + WT++   G  DV+V V+
Sbjct: 445 LGVPHHDIAGVTPEGKR--SMMKLSQRMVGSFCASLSSSPLQRWTLL--SGTTDVSVRVS 500

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNID 462
           +      G       G P   N V+ + A+ +   VP   +  F+R+   RS+W     D
Sbjct: 501 THRSTDSG-------GQP---NGVVLSAATSIWLPVPGDHVFAFVRDENARSQW-----D 545

Query: 463 VYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM--- 519
           V S                   G+QV              EV ++   G +P + I    
Sbjct: 546 VLS------------------HGNQV-------------QEVSRIPN-GSNPGNCISLLR 573

Query: 520 -----PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRI 565
                   M +LQ     +     + A ++++PID   A+           PLLPSGF I
Sbjct: 574 GLNANQNSMLILQ-----ESCTDASGALVVYSPIDIPAANVVMSGEDPSGIPLLPSGFAI 628

Query: 566 IP 567
           +P
Sbjct: 629 LP 630


>gi|297741089|emb|CBI31820.3| unnamed protein product [Vitis vinifera]
          Length = 885

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 116/505 (22%), Positives = 182/505 (36%), Gaps = 98/505 (19%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           KY R+T EQ+  LE  + E P P   +R  L R+     N+EP+Q+K WFQNRR + K  
Sbjct: 39  KYHRHTQEQINELETCFKEWPHPDEKQRLDLSRKL----NLEPRQVKFWFQNRRTQMKNQ 94

Query: 75  -QRKEASRLQAVNRKLTAMN----------------------KLLMEENDRLQKQVSQLV 111
            +R E   L+  N KL   N                       + +EEN        QL 
Sbjct: 95  LERHENVMLRQENDKLRVENVAIKDAVRNPICNHCGGVAMLGNITIEEN--------QLR 146

Query: 112 YENGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGL---------LSIA 162
            EN   R          +      V        +P   PR +S   L         + +A
Sbjct: 147 VENAQLRDELSRICGLAEKFLGRPVTPLA----SPIALPRPSSNLELEVAGNGSVFVELA 202

Query: 163 EETLTEFLSKATGTAVEWV-QMPGMK----PGPDSVGIVAIS---------HGCSGVAAR 208
              + E L  A   +  W+  + G K    P     G+V I+          G       
Sbjct: 203 VTAMDELLRLAQADSPIWMTSLDGGKETLNPASRETGMVMINSLALVETLMDGSRWAQMF 262

Query: 209 ACGLVGLEPTRVAEILKDRPRGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVV 262
            C +     T V      R R  A+      L  L+ L P R    LR+     +G   V
Sbjct: 263 PCVIAKASTTDVLSSGIGRTRHGALQLMHAELQVLSPLVPVRQVKFLRFCKQHGEGLWAV 322

Query: 263 CERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 322
            + S+    +G +   +  FV    L SG +++    G + +  ++H + +  +V  + R
Sbjct: 323 VDVSIDTALDGAS---INSFVNCRRLLSGCVVQDLSNGYTRVTWIEHSEYDESAVHYLYR 379

Query: 323 PLYESSTVLAQKTTMAAL-RQLRQMAQEVTQS-------SVNGWGRRPAALRALSQRLSR 374
            L  S         +A L RQ   +A  ++ +        +   GRR  +L  L+ R+  
Sbjct: 380 SLLSSGLGFGALRWLATLQRQCESIAILLSSTVPCEDHPVLTQAGRR--SLLQLTNRMRD 437

Query: 375 GFNEAVNGFTDEGWTVMGNDGM-DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKA 433
            F   V   T   W  +    + +DV V+   S +             P     V+ + A
Sbjct: 438 NFCAGVCASTVRMWNKLHVASLGEDVKVMTRKSMN------------IPGEPPGVILSAA 485

Query: 434 SMLLQNVPPAILLRFLRE--HRSEW 456
           + +   +    L  FLR+   RS+W
Sbjct: 486 TSVWMPIMHQQLFNFLRDERQRSKW 510


>gi|357136990|ref|XP_003570085.1| PREDICTED: homeobox-leucine zipper protein ROC5-like [Brachypodium
           distachyon]
          Length = 791

 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 36/168 (21%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE L+ ECP P   +R +L R      +++ +Q+K WFQNRR + K +
Sbjct: 90  RYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL----SLDARQVKFWFQNRRTQMKTQ 145

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  +S         C S 
Sbjct: 146 LERHE-----------NALLKQENDKLRA-------ENMTIREAMRSPMCG----GCGSP 183

Query: 137 VTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
              G+  L  QH          L I    L + L++    A +++  P
Sbjct: 184 AMLGEVSLEEQH----------LRIENARLKDELNRVCALATKFLGKP 221



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 34/243 (13%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI---QNGPTMPPVQHFVRAEML 288
           A L  L+ L P R+   LR+   L +G+  V + S+  +   QN  T     +  +   L
Sbjct: 417 AELQVLSPLVPIREVIFLRFCKQLAEGAWAVVDVSIDGLMRDQNSATTSTAANL-KCRRL 475

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG +++    G   +  V+H + +  SV +  RPL  S         +A L RQ   +A
Sbjct: 476 PSGCVMQDTPSGFCKVTWVEHTEYDEASVHQFYRPLLRSGLAFGASRWLATLQRQCECLA 535

Query: 348 QEVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM----GNDG 395
             ++  +V           G+R  ++  L++R++  F   V+  +   W+ +    G+ G
Sbjct: 536 ILMSPPTVAASEPMAISLEGKR--SMLKLARRMTDNFCAGVSASSAREWSKLDGATGSIG 593

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--R 453
            +DV V+   S  +            P     V+ + A+ +   V P  L  FLR+   R
Sbjct: 594 -EDVRVMARKSVSE------------PGEPPGVVLSAATSVWVPVAPEKLFDFLRDEQLR 640

Query: 454 SEW 456
           +EW
Sbjct: 641 AEW 643


>gi|12002853|gb|AAG43405.1|AF172931_1 homeobox 1 [Picea abies]
          Length = 763

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 95/435 (21%), Positives = 176/435 (40%), Gaps = 93/435 (21%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     D    V + SL +++   +       +R    PSG LI+    
Sbjct: 400 LVPTREIYFVRYCKQHSDSIWAVVDVSLDSLRGNSS-----SVIRCRRRPSGCLIQEMPN 454

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSV---- 355
             S +  V+H++ +  +V  + R L  S      K  +A L++  +    V  S++    
Sbjct: 455 SYSKVTWVEHVEADDRAVHHIYRQLVNSGMAFGAKRWIATLQRQCERLASVLASNIPARD 514

Query: 356 -----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                +  GR+  ++  L++R+   F   V+  T   WT +   G +DV V+   S D  
Sbjct: 515 LGVIPSPEGRK--SILKLAERMVTSFCAGVSASTAHTWTTLSGSGAEDVRVMTRKSIDD- 571

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     ++ + A+ L   VPP  +  FLR+   R+EW     D+ S   
Sbjct: 572 -----------PGRPPGIILSAATSLWLPVPPKKVFDFLRDENSRNEW-----DILSNGG 615

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
           +                 Q +  +A+  +    + ++++  V  +  + ++     L + 
Sbjct: 616 L----------------VQEVDHIANGQDPGNCVSLLRVNTVNSNQSNMLI-----LQES 654

Query: 529 CSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSPNR 579
           C+    +A G+   +I+AP+D             D   LLPSGF I+P DS K  +  N 
Sbjct: 655 CT----DASGSF--VIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILP-DSPKCMAVTNS 707

Query: 580 TLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSII 639
            ++     ++G  G               S++T+AF+   +S     ++  +   V S+I
Sbjct: 708 GIN-----DLGTGG---------------SLLTVAFQILVDSVPTAKLSLGSVATVNSLI 747

Query: 640 S-SVQRVALALSPSN 653
           S +V R+  A+   N
Sbjct: 748 SCTVDRIKAAVMREN 762



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 87  RYHRHTQHQIQEMEMFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 142

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E ++L++ N KL + N
Sbjct: 143 HERHENTQLRSENEKLRSEN 162


>gi|357147560|ref|XP_003574393.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Brachypodium
           distachyon]
          Length = 888

 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 8/95 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 128 RYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 183

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
           ++    +A N  L A N+ L  +N RLQ  +  +V
Sbjct: 184 QD----RADNVILRAENESLKTDNFRLQAALRNVV 214


>gi|223973911|gb|ACN31143.1| unknown [Zea mays]
 gi|223974081|gb|ACN31228.1| unknown [Zea mays]
 gi|238011808|gb|ACR36939.1| unknown [Zea mays]
          Length = 330

 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 13/166 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 74  KKRRLTPEQVLLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 129

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
              ++  RL+A    L A +  L+++N+RL+ QV  L  +       T+    AT DT+ 
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNNRLRSQVVSLTEKLQEKEDATEGG--ATADTAA 187

Query: 134 ESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTE-FLSKATGTAV 178
            +V          + P   A PA    + +E  +E  LS  +G + 
Sbjct: 188 PAVDVEASLADDVEEP---AEPAATFEVLQEVKSEDRLSTGSGGSA 230


>gi|195623632|gb|ACG33646.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|195624474|gb|ACG34067.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
          Length = 331

 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 13/166 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 74  KKRRLTPEQVLLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 129

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
              ++  RL+A    L A +  L+++N+RL+ QV  L  +       T+    AT DT+ 
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNNRLRSQVVSLTEKLQEKEDATEGG--ATADTAA 187

Query: 134 ESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTE-FLSKATGTAV 178
            +V          + P   A PA    + +E  +E  LS  +G + 
Sbjct: 188 PAVDVEASLADDVEEP---AEPAATFEVLQEVKSEDRLSTGSGGSA 230


>gi|345195198|tpg|DAA34964.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 687

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 7  DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
          +G        +Y R+TP Q++ LE ++ ECP P   +R  L RE      +EP+QIK WF
Sbjct: 8  EGSDSQRQRKRYHRHTPRQIQQLEAMFKECPHPDENQRAALSREL----GLEPRQIKFWF 63

Query: 67 QNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 98
          QNRR + K   +R +   L+A N K+   N  + E
Sbjct: 64 QNRRTQMKAQHERADNCFLRAENDKIRCENITMRE 98



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 147/362 (40%), Gaps = 89/362 (24%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           L+ +T + P R+   LRY   +E G   V + SL+  ++     P     R+  +PSG L
Sbjct: 324 LHIMTPVVPTRELSFLRYCKQIEQGLWAVADVSLEGQRDAHYGVP----SRSRRMPSGCL 379

Query: 294 IRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQKTTMAAL-RQLRQMAQEVT 351
           I     G S +  V+HM++E      VL R L  S         +AAL R   + A   T
Sbjct: 380 IADMSNGYSKVTWVEHMEIEQMLPINVLYRNLVLSGAAFGAHRWLAALQRACERFASVAT 439

Query: 352 -------QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
                   + V   G+R  ++  LSQR+   F  +++    + WT++   G  DV+V V+
Sbjct: 440 LGVPHHDVAGVTPEGKR--SMTKLSQRMVSSFCASLSSSPLQRWTLLS--GTTDVSVRVS 495

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNID 462
           +        + S  +G P   N V+ + A+ +   VP   +  F+R+   RS+W     D
Sbjct: 496 T--------HRSTDSGQP---NGVVLSAATSIWLPVPGDHVFAFVRDENARSQW-----D 539

Query: 463 VYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM--- 519
           V S                   G+QV              EV ++   G +P + I    
Sbjct: 540 VLS------------------HGNQV-------------QEVSRIPN-GSNPGNCISLLR 567

Query: 520 -----PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRI 565
                   M +LQ     +     + A ++++PID   A+           PLLPSGF I
Sbjct: 568 GLNANQNSMLILQ-----ESCTDASGALVVYSPIDIPAANVVMSGEDPSGIPLLPSGFAI 622

Query: 566 IP 567
           +P
Sbjct: 623 LP 624


>gi|357137911|ref|XP_003570542.1| PREDICTED: homeobox-leucine zipper protein ROC8-like [Brachypodium
           distachyon]
          Length = 713

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 16/122 (13%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           D         +Y R+TP Q++ LE  + ECP P   +R  L RE      +EP+QIK WF
Sbjct: 14  DAAVAQRRKKRYHRHTPRQIQQLEATFKECPHPDENQRMHLSREL----GLEPRQIKFWF 69

Query: 67  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV--------YENGYFR 118
           QNRR + K + E    +A N  L A N  +  EN  +++ +  ++          + YF 
Sbjct: 70  QNRRTQMKAQHE----RADNCFLRAENDKIRCENIAMREALKNVICPTCGGPHTNDDYFD 125

Query: 119 QH 120
           +H
Sbjct: 126 EH 127



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 139/370 (37%), Gaps = 84/370 (22%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHF-----VRAEML 288
           L+ +T + P R+   LRY   +E G   V + S+  +Q        +++      RA  L
Sbjct: 334 LHVMTPVVPTRELCFLRYCRQIEQGLWAVADVSVDLLQQRDHAAASRYYGAPPQARARKL 393

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYE----SSTVLAQKTTMAALRQ-- 342
           PSG LI     G S +  V+HM+         + PLY     S         +AAL++  
Sbjct: 394 PSGCLIADMSNGYSKVTWVEHMETTEGDNKNPINPLYRDLVLSGAAFGAHRWLAALQRAC 453

Query: 343 -------LRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDG 395
                     M      + V   G+R  ++  LS+R+   F  +++      WT +   G
Sbjct: 454 DRHACLVAASMPHRDIAAGVTAEGKR--SMMRLSERMVSSFCGSLSASQAHRWTTLSGPG 511

Query: 396 MDDVT-------VLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRF 448
                       V+V+ S D             P   N V+ + A+ +   VP   +  F
Sbjct: 512 SSGGGGDDVGVRVMVHRSTD-------------PGQPNGVVLSAATSIWLPVPCDRVYAF 558

Query: 449 LREH--RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIK 506
           +R+   RS+W     DV S          +P       GS    P A +I          
Sbjct: 559 VRDENTRSQW-----DVLSHGNPVQEVSRIPN------GSH---PAASSIS--------L 596

Query: 507 LEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAP 557
           L G+  S         M +LQ     + +   T +++++APID   A+           P
Sbjct: 597 LRGLNASQN------SMLILQ-----ESSTDATGSQVVYAPIDLPAANVVMSGEDPSAIP 645

Query: 558 LLPSGFRIIP 567
           LLPSGF I+P
Sbjct: 646 LLPSGFTILP 655


>gi|357139585|ref|XP_003571361.1| PREDICTED: homeobox-leucine zipper protein ROC7-like [Brachypodium
           distachyon]
          Length = 817

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE  + ECP P   +R++L R    + N+EP Q+K WFQN+R + K  
Sbjct: 132 RYHRHTQHQIQELEAFFKECPHPDDKQRKELSR----MLNLEPLQVKFWFQNKRTQIKTQ 187

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R+E + L+  N KL A N
Sbjct: 188 HERQENTALRTENEKLRAEN 207



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 116/304 (38%), Gaps = 70/304 (23%)

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWS------VPEVLRPLYESSTVLAQKTTMAALRQ- 342
           SG +I+    G S +  ++H +L   +      V E+ +PL  S T    +  ++ L++ 
Sbjct: 487 SGCVIQEMPNGYSKVTWIEHTELPAAASAADSMVHELYKPLVASGTAFGARRWVSTLKRQ 546

Query: 343 ---LRQMAQEVTQSSVN-----GWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
              L   A  V  SS +       GRR  ++  L++R++  F   V       WT +   
Sbjct: 547 CERLASAAMSVHPSSADSVVTSAEGRR--SMLRLAERMTASFCGGVAASATHQWTTLSGS 604

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH-- 452
           G  DV V+   S D             P     ++   A+     V PA +  FLR+   
Sbjct: 605 GEADVRVMTRKSVDD------------PGRPPGIILNAATSFWLPVSPAEVFAFLRDDST 652

Query: 453 RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGH 512
           RSEW     D+ S                      V+  +AH    +     + L  V +
Sbjct: 653 RSEW-----DILSNGG-------------------VVHEMAHIANGQNHGNAVSLLRVNN 688

Query: 513 SPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGF 563
           +  +     +M +LQ  S  +E   G  + +++AP+D             D   LLPSGF
Sbjct: 689 ANANQ---SNMLILQESSTDEE---GGWSYVVYAPVDVVAMNVVLNGGDPDYVALLPSGF 742

Query: 564 RIIP 567
            I+P
Sbjct: 743 AILP 746


>gi|345195202|tpg|DAA34966.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 699

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 7  DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
          +G        +Y R+TP Q++ LE ++ ECP P   +R  L RE      +EP+QIK WF
Sbjct: 8  EGSDSQRQRKRYHRHTPRQIQQLEAMFKECPHPDENQRAALSREL----GLEPRQIKFWF 63

Query: 67 QNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 98
          QNRR + K   +R +   L+A N K+   N  + E
Sbjct: 64 QNRRTQMKAQHERADNCFLRAENDKIRCENITMRE 98



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 147/362 (40%), Gaps = 89/362 (24%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           L+ +T + P R+   LRY   +E G   V + SL   ++     P     R+  +PSG L
Sbjct: 326 LHIMTPVVPTRELSFLRYCKQIEQGLWAVADVSLDGQRDAHYGVP----SRSRRMPSGCL 381

Query: 294 IRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQKTTMAAL-RQLRQMAQEVT 351
           I     G S +  V+H+++E      VL R L  S         +AAL R   + A   T
Sbjct: 382 IADMSNGYSKVTWVEHLEIEHMLPINVLYRNLVLSGAAFGAHRWLAALQRACERFASLAT 441

Query: 352 -------QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
                   + V   G+R  ++  LSQR+   F  +++    + WT++   G  DV+V V+
Sbjct: 442 LGVPHHDVAGVTPEGKR--SMMRLSQRMVSSFCASLSSSPLQRWTLLS--GTTDVSVCVS 497

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNID 462
           +        + S  +G P   N V+ + A+ +   VP   +  F+R+   RS+W     D
Sbjct: 498 T--------HRSTDSGQP---NGVVLSAATSIWLPVPGDHVFAFVRDENARSQW-----D 541

Query: 463 VYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM--- 519
           V S                   G+QV              EV ++   G +P + I    
Sbjct: 542 VLS------------------HGNQV-------------QEVSRIPN-GSNPGNCISLLR 569

Query: 520 -----PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRI 565
                   M +LQ     +  A  + A ++++PID   A+           PLLPSGF I
Sbjct: 570 GLNANQNSMLILQ-----ESCADASGALVVYSPIDIPAANVVMSGEDPSGIPLLPSGFAI 624

Query: 566 IP 567
           +P
Sbjct: 625 LP 626


>gi|224116084|ref|XP_002317205.1| predicted protein [Populus trichocarpa]
 gi|222860270|gb|EEE97817.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 101/435 (23%), Positives = 166/435 (38%), Gaps = 98/435 (22%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     D +  V + SL ++   P++       +     SG LI+    
Sbjct: 362 LVPTRENYFVRYCKQHTDATWAVVDVSLDSL--CPSL-----MSKCRRRSSGCLIQELPN 414

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNG- 357
           G S +  V+H +++  SV  + RPL  S      K  +  L RQ  ++A  +  +   G 
Sbjct: 415 GYSNVVWVEHTEVDDRSVHNIYRPLVNSGLAFGAKRWVGTLDRQCERLASSMAINIPTGD 474

Query: 358 -------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                   GR+  ++  L++R+   F   V   T   WT +   G DDV V+   S D  
Sbjct: 475 LCVITTPEGRK--SILKLAERMVMSFCTGVGASTAHTWTTLSATGSDDVRVMTRKSMDD- 531

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE--HRSEWADNNIDVYSAAA 468
                      P     ++ + A+     VP   +  FL++  HRSEW     D+ S   
Sbjct: 532 -----------PGRPPGIVLSAATSFWIPVPSKKVFDFLKDENHRSEW-----DILSN-- 573

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
                           G QV   +AH     +    + L  V  +        +M +LQ 
Sbjct: 574 ----------------GGQV-QEMAHIANGRDPGNCVSLLRVNSTNSSQ---SNMLILQ- 612

Query: 529 CSGMDENAVGTCAELIFAPIDASFA---------DDAPLLPSGFRIIPLDSGKETSSPNR 579
               +     T + +I+AP+D S           D   LLPSGF I+P   G        
Sbjct: 613 ----ESCTDSTGSYVIYAPVDISAMNIVLSGGDPDYVALLPSGFAILPDGPG-------- 660

Query: 580 TLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSII 639
               A  L++G  G               S++T+AF+   +S     ++  +   V S+I
Sbjct: 661 -YGPAGILDVGSGG---------------SLLTVAFQILVDSVPSVKLSLGSVATVNSLI 704

Query: 640 S-SVQRVALALSPSN 653
             +V+R+  A+   N
Sbjct: 705 KCTVERIKAAVMCDN 719



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 36/168 (21%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E  + ECP P   +R++L RE      ++P Q+K WFQN+R + K +
Sbjct: 55  RYHRHTQRQIQEMEAFFQECPHPDDKQRKELSREL----GLDPLQVKFWFQNKRTQMKAQ 110

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E S     N  L A N+ L  EN+R ++ +S     N                  C   
Sbjct: 111 HERSE----NSILKAENEKLRMENNRYKEALSSASCPN------------------CGGP 148

Query: 137 VTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMP 184
              G+     QH          L I    L E + + +G A ++V  P
Sbjct: 149 AALGEMSFDEQH----------LRIENARLREEIDRISGIAAKYVGKP 186


>gi|33355392|gb|AAQ16126.1| homeodomain protein BNLGHi6313 [Gossypium hirsutum]
          Length = 788

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 28/129 (21%)

Query: 14  DNG-------KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           DNG       K+ R+ P Q+  LE  + ECP P   +R++L R       +E KQIK WF
Sbjct: 90  DNGRPPKKKKKFHRHNPHQIHELESFFKECPHPDEKQRRELSRRLA----LESKQIKFWF 145

Query: 67  QNRRCREK---QRKEASRLQAVNRKLTAMNKLLMEE--------------NDRLQKQVSQ 109
           QNRR + K   +R E   L+  N KL A N LL +                D +  + SQ
Sbjct: 146 QNRRTQMKTQLERHENVFLKQENDKLRAENDLLRQAIASAICNNCGVPAVPDEISYEPSQ 205

Query: 110 LVYENGYFR 118
           L+ EN   +
Sbjct: 206 LMIENSRLK 214



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 90/442 (20%), Positives = 175/442 (39%), Gaps = 87/442 (19%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A    L+ L P R    +R+     D    + + S+ N+ N         F     LPSG
Sbjct: 415 AEFQVLSPLVPIRQVQFIRFCKQHSDSVWAIVDVSI-NLSNAAN---ALMFANCRRLPSG 470

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQ-- 348
            +I+  +   S +  V+H + +  +V  + RPL  S      +  +A L RQ   +AQ  
Sbjct: 471 CVIQDMDNKYSKVTWVEHSEYDESTVHHLFRPLLSSGFGFGAQRWIATLRRQYSSLAQLM 530

Query: 349 --EVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM--GNDGMDDVTVLVN 404
             ++    +N  G++  ++  L+QR++  F+  +   +   W  +  GN G +DV V+  
Sbjct: 531 SPDIHGEDINTVGKK--SMLKLAQRMAYNFSAGIGASSVNKWDKLNVGNVG-EDVRVMTR 587

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVY 464
            + +             P     ++ + A+ +   +    L  FLR  R     N  D+ 
Sbjct: 588 KNVND------------PGEPLGIVLSAATSVWMPITQQTLFGFLRNERMR---NQWDIL 632

Query: 465 SAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMF 524
           S+      P             Q +  +A        + +++   V  S  + ++ R+ +
Sbjct: 633 SSGR----PM------------QAMFSVAKGPGQGNCVSILRGAAVNGSDTNMLILRETW 676

Query: 525 LLQLCSGMDENAVGTCAELIFAPIDASF---------ADDAPLLPSGFRIIPLDSGKETS 575
                     +A G  A +++AP+DAS          +    LLPSGF I+P   G +T 
Sbjct: 677 ---------SDACG--ALIVYAPVDASSIRVVMNGGDSSHVALLPSGFAILP---GVQTD 722

Query: 576 SPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYV 635
            P+   D+               + +T+  C   ++T+ F+    S     +   + + V
Sbjct: 723 GPSMQPDI---------------DENTSDGC---ILTVGFQILVNSVPTAKLTVESVETV 764

Query: 636 RSIIS-SVQRVALALSPSNISS 656
             +++ +V+++  ALS + + S
Sbjct: 765 NHLLTCTVEKIKAALSVTQLGS 786


>gi|224125934|ref|XP_002329753.1| predicted protein [Populus trichocarpa]
 gi|222870661|gb|EEF07792.1| predicted protein [Populus trichocarpa]
          Length = 725

 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 17/113 (15%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 29  RYHRHTALQIQKLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 84

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL---------VYENGYFRQH 120
            E    +A N  L A N  +  EN  +++ +  +         V E+ YF +H
Sbjct: 85  HE----RADNSSLRAENDKIRCENIAIREALKNVICPSCGGPPVTEDSYFDEH 133



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 98/441 (22%), Positives = 176/441 (39%), Gaps = 79/441 (17%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           L  L+ L P R+F +LRY   +E G   +   S         +P      R   LPSG L
Sbjct: 336 LQVLSPLVPTREFCILRYCQQIEQGLWAIVSVSYD-------IPQFASQFRCHRLPSGCL 388

Query: 294 IRPCEGGGSIIHIVDHMDLEPWSVP-EVLRPLYESSTVLAQKTTMAALRQL--RQMAQEV 350
           I+    G S +  V+H+++E  +   ++ R L  S      +  +A L+++  R   Q V
Sbjct: 389 IQDMPNGYSKVTWVEHVEIEDKTTTHQLYRDLIHSGMAFGAERWLATLQRMCERVACQMV 448

Query: 351 TQSSVNGWGR---RPAALRA---LSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
           + +S    G     P   R+   L+QR+   F  +++      W+ +   G+ DV V V 
Sbjct: 449 SGNSTRDLGGVIPSPEGKRSMMKLAQRMVSSFCSSISTSNSHRWSTLS--GLHDVGVRVT 506

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS--EWA--DNN 460
                   L+ S   G P   N V+ + A+     V P  +  F ++ R+  +W    + 
Sbjct: 507 --------LHKSTDPGQP---NGVVLSAATTFSLPVSPQNVFSFFKDERTRPQWDVLSSG 555

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
             V   A I  G  S PG+ +     ++ L  + +  + +                    
Sbjct: 556 NAVQEVAHITNG--SHPGNCISVLRVRLSLFGSFSTFYSDCFTAYNTSQ----------- 602

Query: 521 RDMFLLQLCSGMDENAVGTCAEL-IFAPIDASFADDA---------PLLPSGFRIIPLDS 570
            +M +LQ      E+ V +   L ++ P+D    + A         PLLPSGF I P   
Sbjct: 603 NNMLILQ------ESCVDSSGSLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFAISP--- 653

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
                 P++          G   + ++N   + +    S++T+AF+    S     +   
Sbjct: 654 ---DGRPDQ----------GDGASTSSNTQGSTARLSGSLITVAFQILVSSLPSAKLNLE 700

Query: 631 ARQYVRSII-SSVQRVALALS 650
           +   V ++I ++VQ++  A++
Sbjct: 701 SVNTVNNLIGTTVQQIKAAMN 721


>gi|194697640|gb|ACF82904.1| unknown [Zea mays]
          Length = 272

 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 14/158 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 132

Query: 77  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATK-DTS 132
           +   +  RL+A    L A ++ L+ +ND L+ QV  L  +      +  +TT A + D  
Sbjct: 133 QLETDYDRLKAAYDALAADHQGLLADNDNLRAQVISLTEKLQGKETYPSATTAAQEVDQP 192

Query: 133 CESVVTSGQHHLTPQ------HPPRDASPAGLLSIAEE 164
            E    SG   L  Q      H   D +  G LS  E+
Sbjct: 193 DEHTAVSGTEELLAQQLKDNLHSSGDCTGHGTLSSEED 230


>gi|293331325|ref|NP_001169573.1| uncharacterized protein LOC100383453 [Zea mays]
 gi|224030161|gb|ACN34156.1| unknown [Zea mays]
          Length = 487

 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 133/349 (38%), Gaps = 75/349 (21%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DG+  V + SL  ++ G  +       +    PSG LI+    
Sbjct: 120 LVPTRESYFVRYCKQNADGTWAVVDVSLDGLRPGAVL-------KCRRRPSGCLIQEMPN 172

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----MAQEVTQSS 354
           G S +  V+H++++  SV  + + L  S      +  +  L RQ  +    MA  +  S 
Sbjct: 173 GYSKVTWVEHVEVDDRSVHSIYKLLVSSGLAFGARRWVGTLDRQCERLASVMASNIPTSD 232

Query: 355 V----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
           +    +  GR+  ++  L++R+   F   V       WT +   G +DV V+   S D  
Sbjct: 233 IGVITSAEGRK--SMLKLAERMVMSFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDD- 289

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     ++   A+     VPP  +  FLR+   RSEW     D+ S   
Sbjct: 290 -----------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEW-----DILSNGG 333

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQ- 527
                              V+  +AH     +    + L  V  +  +      M +LQ 
Sbjct: 334 -------------------VVQEMAHIANGRDHGNCVSLLRVNSTNSNQ---SSMLILQE 371

Query: 528 LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
            C+ M  + V      I+AP+D             D   LLPSGF I+P
Sbjct: 372 SCTDMSGSYV------IYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 414


>gi|255555881|ref|XP_002518976.1| homeobox protein, putative [Ricinus communis]
 gi|223541963|gb|EEF43509.1| homeobox protein, putative [Ricinus communis]
          Length = 810

 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 8/95 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E L+ ECP P   +R +L ++      ++P+Q+K WFQNRR + K +
Sbjct: 89  RYHRHTARQIQEMESLFKECPHPDDKQRMKLSQDL----GLKPRQVKFWFQNRRTQMKAQ 144

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
           ++    +A N  L A N+ L  +N RLQ ++  L+
Sbjct: 145 QD----RADNIILRAENETLKSDNYRLQAELRNLI 175



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 79/384 (20%), Positives = 142/384 (36%), Gaps = 62/384 (16%)

Query: 232 AILYALTTLAPARDFWLLRYTSV-LEDGSLVVCERSLKNIQNGPTMPPVQ-HFVRAEMLP 289
           A L  L+ L P R+ + LRY    +E+G+  + +  + +         +Q  F      P
Sbjct: 400 AELQVLSPLVPTREAYFLRYCQQNVEEGTWAIVDFPIDSFHED-----IQASFPLYRRRP 454

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQE 349
           SG +I+    G S +  V+H + E   V ++      S         +  L++  +    
Sbjct: 455 SGCVIQDMPNGYSRVTWVEHAETEEKPVHQIFSHFVYSGMAFGAHRWLGVLQRQCERVAS 514

Query: 350 VTQSSVNGWGRRPAA-----LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
           +   +++  G  P+      L  L+QR+ R F   ++  + + WT + +   D V +   
Sbjct: 515 LMARNISDLGVIPSPEARKNLMRLAQRMIRTFCMNISTCSGQSWTALSDSSDDTVRITTR 574

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS----EWADNN 460
              +             P   N V+ +  S      P   +   LR+ R     +   N 
Sbjct: 575 KITE-------------PGQPNGVILSAVSTTWLPYPHYQVFDILRDERRRSQLDVLSNG 621

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
             ++  A I  G  S PG+ +      V    +++ +H E M                  
Sbjct: 622 NALHEVAHIANG--SHPGNCISLLRINVA---SNSSQHVELM------------------ 658

Query: 521 RDMFLLQLCSGMDEN-AVGTCAELIFAPIDASFADDA--PLLPSGFRIIPLDSGKETSSP 577
               L + C+    +  V T   +    +  S  D +  PLLP GF I+P++S   TS  
Sbjct: 659 ----LQESCTDQSGSLIVYTTVNVDSIQLAMSGEDPSCIPLLPLGFVIVPVESITSTSKD 714

Query: 578 ---NRTLDLASALEIGPAGNRATN 598
              N    + S+ E G  G+  T+
Sbjct: 715 TGGNEGNSIKSSEENGNTGHGCTS 738


>gi|356533359|ref|XP_003535232.1| PREDICTED: autophagy-related protein 18-like [Glycine max]
          Length = 207

 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 41/61 (67%)

Query: 331 LAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTV 390
           L ++  + AL+ +RQ+AQE +     G GR+P  L   SQRL RGFN+ VNG+ D+GW++
Sbjct: 143 LIKELNVKALQHIRQIAQESSGEIEYGGGRQPVVLITFSQRLCRGFNDVVNGYVDDGWSL 202

Query: 391 M 391
           M
Sbjct: 203 M 203


>gi|31339097|dbj|BAC77155.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 783

 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 106 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 161

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S+L++ N KL A N
Sbjct: 162 HERHENSQLRSDNEKLRAEN 181



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 102/435 (23%), Positives = 169/435 (38%), Gaps = 97/435 (22%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P +       +    PSG LI+  
Sbjct: 418 SPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVL-------KCRRRPSGCLIQEM 470

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----MAQEVTQ 352
             G S +  V+H++++  SV  + + L  S      +  +  L RQ  +    MA  +  
Sbjct: 471 PNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPT 530

Query: 353 SSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           S +    +  GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 531 SDIGVITSSEGRK--SMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 588

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                      G P     VL A  S  L  VP   +  FLR+   RSEW     D+ S 
Sbjct: 589 D---------PGRPP--GIVLNAVTSFWLP-VPSKRVFHFLRDESSRSEW-----DILSN 631

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
             I                   +  +AH     +    + L  V  S  +      M +L
Sbjct: 632 GGI-------------------VQEMAHIANGRDQGNCVSLLRVNSSNSNQSN---MLIL 669

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSS 576
           Q  C+    +A G+   +I+AP+D             D   LLPSGF I+P         
Sbjct: 670 QESCT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP--------- 714

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
                        GPA +    +         S++T+AF+   +S     ++  +   V 
Sbjct: 715 ------------DGPAHDGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVN 762

Query: 637 SIIS-SVQRVALALS 650
           S+I+ +V+R+  A+S
Sbjct: 763 SLIACTVERIKAAVS 777


>gi|115460702|ref|NP_001053951.1| Os04g0627000 [Oryza sativa Japonica Group]
 gi|122240821|sp|Q0J9X2.1|ROC2_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC2; AltName:
           Full=GLABRA 2-like homeobox protein 2; AltName:
           Full=HD-ZIP protein ROC2; AltName: Full=Homeodomain
           transcription factor ROC2; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 2
 gi|113565522|dbj|BAF15865.1| Os04g0627000 [Oryza sativa Japonica Group]
          Length = 784

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 162

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S+L++ N KL A N
Sbjct: 163 HERHENSQLRSDNEKLRAEN 182



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 168/435 (38%), Gaps = 97/435 (22%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P +       +    PSG LI+  
Sbjct: 419 SPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVL-------KCRRRPSGCLIQEM 471

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----MAQEVTQ 352
             G S +  V+H++++  SV  + + L  S      +  +  L RQ  +    MA  +  
Sbjct: 472 PNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPT 531

Query: 353 SSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           S +    +  GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 532 SDIGVITSSEGRK--SMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 589

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 590 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEW-----DILSN 632

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
             I                   +  +AH     +    + L  V  S  +      M +L
Sbjct: 633 GGI-------------------VQEMAHIANGRDQGNCVSLLRVNSSNSNQSN---MLIL 670

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSS 576
           Q  C+    +A G+   +I+AP+D             D   LLPSGF I+P         
Sbjct: 671 QESCT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP--------- 715

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
                        GPA +    +         S++T+AF+   +S     ++  +   V 
Sbjct: 716 ------------DGPAHDGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVN 763

Query: 637 SIIS-SVQRVALALS 650
           S+I+ +V+R+  A+S
Sbjct: 764 SLIACTVERIKAAVS 778


>gi|218195634|gb|EEC78061.1| hypothetical protein OsI_17520 [Oryza sativa Indica Group]
          Length = 784

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 162

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S+L++ N KL A N
Sbjct: 163 HERHENSQLRSDNEKLRAEN 182



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 168/435 (38%), Gaps = 97/435 (22%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P +       +    PSG LI+  
Sbjct: 419 SPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVL-------KCRRRPSGCLIQEM 471

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----MAQEVTQ 352
             G S +  V+H++++  SV  + + L  S      +  +  L RQ  +    MA  +  
Sbjct: 472 PNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPT 531

Query: 353 SSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           S +    +  GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 532 SDIGVITSSEGRK--SMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 589

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 590 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEW-----DILSN 632

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
             I                   +  +AH     +    + L  V  S  +      M +L
Sbjct: 633 GGI-------------------VQEMAHIANGRDQGNCVSLLRVNSSNSNQSN---MLIL 670

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSS 576
           Q  C+    +A G+   +I+AP+D             D   LLPSGF I+P         
Sbjct: 671 QESCT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP--------- 715

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
                        GPA +    +         S++T+AF+   +S     ++  +   V 
Sbjct: 716 ------------DGPAHDGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVN 763

Query: 637 SIIS-SVQRVALALS 650
           S+I+ +V+R+  A+S
Sbjct: 764 SLIACTVERIKAAVS 778


>gi|33355394|gb|AAQ16127.1| homeodomain protein BNLGHi6863 [Gossypium hirsutum]
          Length = 762

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 8/102 (7%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           L   +Y R+T  Q++ LE ++ ECP P   +R +L +E      ++P+Q+K WFQNRR +
Sbjct: 75  LKKKRYHRHTAHQIQELEAVFKECPHPDDKQRMKLSQEL----GLKPRQVKFWFQNRRTQ 130

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
            K +++ S     +  L A N  L  E  RLQ ++S+LV  N
Sbjct: 131 MKAQQDRSE----DVILRAENDSLKSEFYRLQAELSKLVCPN 168



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 12/178 (6%)

Query: 232 AILYALTTLAPARDFWLLRY---TSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
           A L+ L+ L P R+ + LRY    +V ++    + +  L    N         F   +  
Sbjct: 376 AELHCLSPLVPTREAYFLRYCQQQNVEDETYWAIVDFPLDGFHNSLQT----SFPLYKRR 431

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQ 348
           PSG LI+    G S +  V+H ++E   + ++      S         +A L +  +   
Sbjct: 432 PSGCLIQDMPNGYSRVTWVEHAEIEEKPIHQIFSHFVHSGMAFGANRWLAVLERQCERIA 491

Query: 349 EVTQSSVNGWGRRPAA-----LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
            +  +++   G  P+      L  LSQR+ R F   ++  + + WT + +   D V +
Sbjct: 492 SLMATNIPDIGVIPSPEARKNLMRLSQRMIRTFCVNISSCSGQVWTAVPDSSDDTVRI 549


>gi|225427116|ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein ROC3 [Vitis vinifera]
 gi|147777871|emb|CAN60291.1| hypothetical protein VITISV_032685 [Vitis vinifera]
 gi|297742043|emb|CBI33830.3| unnamed protein product [Vitis vinifera]
          Length = 798

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 8/98 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 89  RYHRHTARQIQEMEALFKECPHPDDKQRMKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 144

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
           ++ S     N  L A N+ L  EN RLQ  +  ++  N
Sbjct: 145 QDRSD----NVILRAENENLKNENYRLQAALRSVICPN 178



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 90/448 (20%), Positives = 162/448 (36%), Gaps = 62/448 (13%)

Query: 232 AILYALTTLAPARDFWLLRY-TSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           A L  L+ L P R+   LRY    +++G+  + +  + +  N    P V  + R    PS
Sbjct: 398 AELQVLSPLVPTRETHFLRYCQQNVDEGTWAIVDFPIDSF-NDNLQPSVPRYRRR---PS 453

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEV 350
           G +I+    G S +  V+H D+E   V  +      S         +A L++  +    +
Sbjct: 454 GCIIQDMPNGYSRVTWVEHADVEEKPVHHIFHHFVNSGMAFGATRWLAVLQRQCERVASL 513

Query: 351 TQSSVNGWGRRPAA-----LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNS 405
              +++  G  P+      L  L+QR+ R F+  ++  + + WT + +   D V +    
Sbjct: 514 MARNISDLGVIPSPEARKNLMNLAQRMIRTFSVNISTSSGQSWTALSDSSDDTVRITTRK 573

Query: 406 SPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS----EWADNNI 461
             +             P   N V+ +  S      P   +   LR+ R     +   N  
Sbjct: 574 ITE-------------PGQPNGVILSAVSTTWLPHPHYHVFDLLRDERRRAQLDVLSNGN 620

Query: 462 DVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPR 521
            ++  A I  G  S PG+ +      V    +  +E     E    +   H     I   
Sbjct: 621 SLHEVAHIANG--SHPGNCISLLRINVASNSSQNVE-LMLQESCTDQSGSHVVYTTI--- 674

Query: 522 DMFLLQLC-SGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRT 580
           D+  +QL  SG D + +                   PLLP GF I+P+        PN  
Sbjct: 675 DVDAIQLAMSGEDPSCI-------------------PLLPMGFAIVPV-------VPNND 708

Query: 581 LDLASALEIGPAGNRATNNYSTNSTCMRSV-MTIAFEFAFESHMQEHVATMARQYVRSII 639
            ++ +  +  P       N   NS C+ +V + +       + +     T    ++ + +
Sbjct: 709 CNIMTTTDDNPMPPSGDGN-GHNSGCLLTVGLQVLASTIPTAKLNLSSVTAINNHLCNTV 767

Query: 640 SSVQRVALALSPSNISSQAGLRTPLGTP 667
             +     ++ P N SS  G  T    P
Sbjct: 768 HQINAALSSICPDNSSSMVGSSTEPAAP 795


>gi|212275139|ref|NP_001130421.1| uncharacterized protein LOC100191517 [Zea mays]
 gi|194689074|gb|ACF78621.1| unknown [Zea mays]
 gi|194700286|gb|ACF84227.1| unknown [Zea mays]
 gi|238011534|gb|ACR36802.1| unknown [Zea mays]
          Length = 290

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 13/163 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 34  KKRRLTPEQVLLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 89

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
              ++  RL+A    L A +  L+++N+RL+ QV  L  +       T+    AT DT+ 
Sbjct: 90  QLERDFDRLKASFDALRADHDALLQDNNRLRSQVVSLTEKLQEKEDATEGG--ATADTAA 147

Query: 134 ESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTE-FLSKATG 175
            +V          + P   A PA    + +E  +E  LS  +G
Sbjct: 148 PAVDVEASLADDVEEP---AEPAATFEVLQEVKSEDRLSTGSG 187


>gi|224138204|ref|XP_002326544.1| predicted protein [Populus trichocarpa]
 gi|222833866|gb|EEE72343.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 8/95 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E ++ ECP P   +R +L  E      ++P+Q+K WFQNRR + K +
Sbjct: 35  RYHRHTARQIQEMEAMFKECPHPDDKQRMRLSHEL----GLKPRQVKFWFQNRRTQMKAQ 90

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
           ++ S     N  L A N+ L  +N RLQ ++  L+
Sbjct: 91  QDRSD----NNILRAENESLQNDNYRLQAELRNLI 121


>gi|357124875|ref|XP_003564122.1| PREDICTED: homeobox-leucine zipper protein ROC8-like [Brachypodium
           distachyon]
          Length = 714

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP Q++ LE ++ ECP P   +R QL RE      +E +QIK WFQNRR + K  
Sbjct: 24  RYHRHTPRQIQTLEGMFKECPHPDENQRAQLSREL----GLEARQIKFWFQNRRTQMKAQ 79

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R +   L+A N K+   N  + E
Sbjct: 80  HERADNCFLRAENDKIRCENIAMGE 104



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 141/355 (39%), Gaps = 73/355 (20%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           ++ LT L  +R+F  LRY   ++ G   + + S++  ++     P     R+  LPSG L
Sbjct: 345 MHMLTPLVQSREFSFLRYCRQIDQGLWAIADVSVETERDAQFGVPS----RSRRLPSGCL 400

Query: 294 IRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQKTTMAALRQ-------LRQ 345
           I     G S +  V+HM++E      VL R +  S      +  + AL         L  
Sbjct: 401 IADMANGYSKVTWVEHMEIEDKGPIGVLYRDMVTSGAGFGAQRWLGALSNACDRYGALAA 460

Query: 346 MA--QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           +A        +V   GRR  ++  LSQR+   F  A+       WT +   G +D+ V V
Sbjct: 461 LAVMNAADLGAVTADGRR--SMMKLSQRMVANFCGALTANQLIVWTTIPG-GANDMNVRV 517

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE--HRSEWADNNI 461
           +        L+     G P   N V+ + A+ +   VP   +  FLR+   R++W     
Sbjct: 518 S--------LHRVDEPGLP---NGVVLSAATSVWLPVPCDHVFVFLRDVNTRNQW----- 561

Query: 462 DVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPR 521
           DV +        C +P                     +    V  L GV  S +      
Sbjct: 562 DVLTHGNTVQEACRIPNG------------------SDPANCVTLLRGVNASHD------ 597

Query: 522 DMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIP 567
            M +LQ     +  A  + + L+++PID        S  D A  PLLPSGF I+P
Sbjct: 598 SMLVLQ-----ESCADPSGSMLVYSPIDMPAVNLVTSGEDTANIPLLPSGFIILP 647


>gi|345194180|tpg|DAA34955.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414585327|tpg|DAA35898.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 795

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE  ++    P Q+K WFQN+R + K  
Sbjct: 112 RYHRHTLHQIQEMEAFFKECPHPDDKQRKELSRELGLV----PLQVKFWFQNKRTQMKNQ 167

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R+E S+L+A N KL A N
Sbjct: 168 HERQENSQLRAENEKLRAEN 187



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 132/348 (37%), Gaps = 75/348 (21%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P RD + +RY     DG+  V + SL               ++    PSG LI+    
Sbjct: 432 LVPTRDSYFVRYCKQNADGTWAVVDVSLD----------TSSVLKCRRRPSGCLIQEMPN 481

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----MAQEVTQSS 354
           G S +  V+H++++  SV  + + L +S      +  +  L RQ  +    MA  +  S 
Sbjct: 482 GYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERLASVMASNIPTSD 541

Query: 355 V----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
           +    +  GR+  ++  L++R+   F   V       WT +   G DDV V+   S D  
Sbjct: 542 IGVITSTEGRK--SMLKLAERMVTSFCGGVTASAAHQWTTLSGSGADDVRVMTRKSVDD- 598

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     ++   A+     + P  +  FLR+   RSEW     D+ S   
Sbjct: 599 -----------PGRPPGIVLNAATSFWLPITPKRVFDFLRDESSRSEW-----DILSNGG 642

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQL 528
                              V+  +AH     +    + L  V  S  ++     + L + 
Sbjct: 643 -------------------VVQEMAHIANGRDHGNCVSLLRVNQS-TNSTQSNMLILQES 682

Query: 529 CSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
           C+    +A G+   +I+AP+D             D   LLPSGF I+P
Sbjct: 683 CT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 724


>gi|116312004|emb|CAJ86361.1| OSIGBa0117N13.5 [Oryza sativa Indica Group]
          Length = 781

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 104 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 159

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S+L++ N KL A N
Sbjct: 160 HERHENSQLRSDNEKLRAEN 179



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 168/435 (38%), Gaps = 97/435 (22%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P +       +    PSG LI+  
Sbjct: 416 SPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVL-------KCRRRPSGCLIQEM 468

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----MAQEVTQ 352
             G S +  V+H++++  SV  + + L  S      +  +  L RQ  +    MA  +  
Sbjct: 469 PNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPT 528

Query: 353 SSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           S +    +  GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 529 SDIGVITSSEGRK--SMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 586

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 587 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEW-----DILSN 629

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
             I                   +  +AH     +    + L  V  S  +      M +L
Sbjct: 630 GGI-------------------VQEMAHIANGRDQGNCVSLLRVNSSNSNQSN---MLIL 667

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSS 576
           Q  C+    +A G+   +I+AP+D             D   LLPSGF I+P         
Sbjct: 668 QESCT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP--------- 712

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
                        GPA +    +         S++T+AF+   +S     ++  +   V 
Sbjct: 713 ------------DGPAHDGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVN 760

Query: 637 SIIS-SVQRVALALS 650
           S+I+ +V+R+  A+S
Sbjct: 761 SLIACTVERIKAAVS 775


>gi|39545845|emb|CAE04753.3| OSJNBb0060E08.16 [Oryza sativa Japonica Group]
          Length = 781

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 104 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 159

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S+L++ N KL A N
Sbjct: 160 HERHENSQLRSDNEKLRAEN 179



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 168/435 (38%), Gaps = 97/435 (22%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P +       +    PSG LI+  
Sbjct: 416 SPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVL-------KCRRRPSGCLIQEM 468

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----MAQEVTQ 352
             G S +  V+H++++  SV  + + L  S      +  +  L RQ  +    MA  +  
Sbjct: 469 PNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPT 528

Query: 353 SSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           S +    +  GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 529 SDIGVITSSEGRK--SMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 586

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 587 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEW-----DILSN 629

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
             I                   +  +AH     +    + L  V  S  +      M +L
Sbjct: 630 GGI-------------------VQEMAHIANGRDQGNCVSLLRVNSSNSNQSN---MLIL 667

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSS 576
           Q  C+    +A G+   +I+AP+D             D   LLPSGF I+P         
Sbjct: 668 QESCT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP--------- 712

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
                        GPA +    +         S++T+AF+   +S     ++  +   V 
Sbjct: 713 ------------DGPAHDGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVN 760

Query: 637 SIIS-SVQRVALALS 650
           S+I+ +V+R+  A+S
Sbjct: 761 SLIACTVERIKAAVS 775


>gi|224071383|ref|XP_002303433.1| predicted protein [Populus trichocarpa]
 gi|222840865|gb|EEE78412.1| predicted protein [Populus trichocarpa]
          Length = 774

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 8/98 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E ++ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 89  RYHRHTAAQIQEMEAMFKECPHPDDKQRMRLSQEL----GLKPRQVKFWFQNRRTQMKAQ 144

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
           ++ S     N  L A N+ L  +N RLQ ++  L+  N
Sbjct: 145 QDRSD----NLILRAENESLKNDNYRLQAELRNLICPN 178



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 81/394 (20%), Positives = 147/394 (37%), Gaps = 72/394 (18%)

Query: 232 AILYALTTLAPARDFWLLRYT-SVLEDGSLVVCERSLKNIQNG--PTMPPVQHFVRAEML 288
           A L  L+ L P R+ + LR+    +E+G+  + +  L  + +   P+ P  +        
Sbjct: 399 AELQVLSPLVPTRETYFLRFCHQNVEEGTWAIVDFPLDRLHDNIQPSFPLYKRH------ 452

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQ 348
           PSG +I+    G S +  ++H ++E   V ++      S         +  L++  +   
Sbjct: 453 PSGCVIQDMPNGYSRVTWIEHAEIEEKPVHQIFSQYVYSGMAFGAHRWLTVLQRQCERVA 512

Query: 349 EVTQSSVNGWGRRPAA-----LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
            +   +++  G  P+      +  L+QR+ R F+  ++  + + WT + +D  DD   + 
Sbjct: 513 SLMARNISDLGVIPSPEARKNMMRLAQRMIRIFSLNISSSSGQSWTGL-SDSYDDTVRIT 571

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR-EHRS---EWADN 459
                +            P   N V+ +  S      P   +   LR EHR    E   N
Sbjct: 572 TRKITE------------PGQPNGVILSAVSTTWLPYPHYQVFDLLRDEHRRSQLELLSN 619

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
              ++  A I  G  S PG+ +      V    +++ +H E M                 
Sbjct: 620 GNALHEVAHIANG--SHPGNCISLLRINVA---SNSSQHVELM----------------- 657

Query: 520 PRDMFLLQLCSGMDEN-AVGTCAELIFAPIDASFADDA--PLLPSGFRIIPLDSGKETSS 576
                L + C+    +  V T  ++    +  S  D +  PLLP GF I+P++S    S 
Sbjct: 658 -----LQECCTDQSGSLVVYTTVDVESIQLAMSGEDPSCIPLLPLGFVIVPVESSSAVSE 712

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSV 610
            N               N    N   NS C+ +V
Sbjct: 713 GNSM-----------PSNSEDGNGHNNSGCLLTV 735


>gi|302807022|ref|XP_002985242.1| hypothetical protein SELMODRAFT_234698 [Selaginella moellendorffii]
 gi|300147070|gb|EFJ13736.1| hypothetical protein SELMODRAFT_234698 [Selaginella moellendorffii]
          Length = 695

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T +Q   LE  + ECP P   +RQ+L RE      +EP+Q+K WFQNRR + K  
Sbjct: 21  RYHRHTVQQTRQLEMFFKECPHPDEKQRQELGREL----GLEPRQVKFWFQNRRTQMKAH 76

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R + S L+A N  L   N  L E
Sbjct: 77  HERADNSILRAENENLRTENIALRE 101



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 34/239 (14%)

Query: 233 ILYA----LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
           +LYA    L+ L P R+F+ LRY     +    + + S+  +++ P        +R  M 
Sbjct: 310 LLYAELQILSPLVPTREFFFLRYCKQHSERVWAIVDVSIDGLRDNPAPQ-----LRCRMR 364

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG+ I   + G S +  V H++ +      +   L  S      K  +A L RQ  ++ 
Sbjct: 365 PSGFFIEDLQNGYSKVTAVQHIEADHRQTENIYHGLMCSGAAFGAKRWLAILQRQCERLG 424

Query: 348 QEVTQSSV--------NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
             +T +          N  GRR  ++  L+QR++  +   V+      WT +   G +D+
Sbjct: 425 IMLTNNISARDLGVIPNANGRR--SMLFLAQRMTSNYCAGVSASIVHTWTTLSGAGEEDI 482

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
            V+   S +             P     ++ + A+ L   V    L  FLR+   RSEW
Sbjct: 483 RVMTRKSVNN------------PGEPPGIVLSAATSLWVPVNSQRLFEFLRDERLRSEW 529


>gi|225466249|ref|XP_002268272.1| PREDICTED: homeobox-leucine zipper protein ROC8 [Vitis vinifera]
 gi|297738149|emb|CBI27350.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 25/144 (17%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           +DG         Y R+TP+Q++ LE  + +CP P   +R+QL RE      +E +QIK W
Sbjct: 14  QDGPNPRRGRKVYNRHTPQQIQRLEAFFKDCPHPDEAQRRQLGREL----GLESRQIKFW 69

Query: 66  FQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME----------------ENDRLQKQ 106
           FQN+R + K   +R + + L+A N ++   N  + E                E +R Q+ 
Sbjct: 70  FQNKRTQTKTQHERADNTALRAENERIQCENLAIREALKNVICPSCGGPPFGEEER-QRN 128

Query: 107 VSQLVYENGYFR-QHTQSTTLATK 129
           + +L  EN   + +H + + L  K
Sbjct: 129 IEKLQLENAQLKEEHEKVSNLLAK 152


>gi|224134761|ref|XP_002327482.1| predicted protein [Populus trichocarpa]
 gi|222836036|gb|EEE74457.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 15/96 (15%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
            +G+     Y R+T +Q+  LE+ + ECP P+  +R+QL RE      +E KQIK WFQN
Sbjct: 14  NSGNKGKKAYHRHTCQQILQLEKFFKECPHPNEKQRRQLSREL----GLEAKQIKFWFQN 69

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQ 104
           RR +EK + E S            N +L  EN+R+ 
Sbjct: 70  RRTQEKAQSERSD-----------NSVLRTENERIH 94


>gi|414585328|tpg|DAA35899.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 830

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE  ++    P Q+K WFQN+R + K  
Sbjct: 112 RYHRHTLHQIQEMEAFFKECPHPDDKQRKELSRELGLV----PLQVKFWFQNKRTQMKNQ 167

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R+E S+L+A N KL A N
Sbjct: 168 HERQENSQLRAENEKLRAEN 187



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 134/359 (37%), Gaps = 62/359 (17%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P RD + +RY     DG+  V + SL               ++    PSG LI+    
Sbjct: 432 LVPTRDSYFVRYCKQNADGTWAVVDVSLD----------TSSVLKCRRRPSGCLIQEMPN 481

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----MAQEVTQSS 354
           G S +  V+H++++  SV  + + L +S      +  +  L RQ  +    MA  +  S 
Sbjct: 482 GYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERLASVMASNIPTSD 541

Query: 355 V----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
           +    +  GR+  ++  L++R+   F   V       WT +   G DDV V+   S D  
Sbjct: 542 IGVITSTEGRK--SMLKLAERMVTSFCGGVTASAAHQWTTLSGSGADDVRVMTRKSVDD- 598

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW---ADNNIDVYS 465
                      P     ++   A+     + P  +  FLR+   RSE    A  +   + 
Sbjct: 599 -----------PGRPPGIVLNAATSFWLPITPKRVFDFLRDESSRSEARTRAPTHTQFFF 647

Query: 466 AAAIKVGPCSLPGSRVGTFGSQ--------VILPLAHTIEHEEFMEVIKLEGVGHSPEDA 517
                +     P         Q        V+  +AH     +    + L  V  S  ++
Sbjct: 648 NREHVLPSYEPPFLFFFFLFLQWDILSNGGVVQEMAHIANGRDHGNCVSLLRVNQS-TNS 706

Query: 518 IMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
                + L + C+    +A G+   +I+AP+D             D   LLPSGF I+P
Sbjct: 707 TQSNMLILQESCT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 759


>gi|109729916|tpg|DAA05772.1| TPA_inf: class IV HD-Zip protein HDZ42 [Selaginella moellendorffii]
          Length = 694

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T +Q   LE  + ECP P   +RQ+L RE      +EP+Q+K WFQNRR + K  
Sbjct: 21  RYHRHTVQQTRQLEMFFKECPHPDEKQRQELGREL----GLEPRQVKFWFQNRRTQMKAH 76

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R + S L+A N  L   N  L E
Sbjct: 77  HERADNSILRAENENLRTENIALRE 101



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 34/239 (14%)

Query: 233 ILYA----LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
           +LYA    L+ L P R+F+ LRY     +    + + S+  +++ P        +R  M 
Sbjct: 309 LLYAELQILSPLVPTREFFFLRYCKQHSERVWAIVDVSIDGLRDNPAPQ-----LRCRMR 363

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG+ I   + G S +  V H++ +      +   L  S      K  +A L RQ  ++ 
Sbjct: 364 PSGFFIEDLQNGYSKVTAVQHIEADHRQTENIYHGLVCSGAAFGAKRWLAILQRQCERLG 423

Query: 348 QEVTQSSV--------NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
             +T +          N  GRR  ++  L+QR++  +   V+      WT +   G +D+
Sbjct: 424 IMLTNNISARDLGVIPNANGRR--SMLFLAQRMTSNYCAGVSASIVHTWTTLSGAGEEDI 481

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
            V+   S +             P     ++ + A+ L   V    L  FLR+   RSEW
Sbjct: 482 RVMTRKSVNN------------PGEPPGIVLSAATSLWVPVNSQRLFEFLRDERLRSEW 528


>gi|75315198|sp|Q9XH36.1|HOX5_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX5; AltName:
           Full=HD-ZIP protein HOX5; AltName: Full=Homeodomain
           transcription factor HOX5; AltName: Full=OsHox5
 gi|5006855|gb|AAD37698.1|AF145729_1 homeodomain leucine zipper protein [Oryza sativa Indica Group]
 gi|125561547|gb|EAZ06995.1| hypothetical protein OsI_29241 [Oryza sativa Indica Group]
          Length = 350

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 21/150 (14%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 86  KKRRLTAEQVQMLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 141

Query: 77  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
           +   +  RL+A    L A +  L+ +NDRL+ QV  L            +  L  K+TS 
Sbjct: 142 QLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISL------------TEKLQDKETSP 189

Query: 134 ES--VVTSGQHHLTPQHPPRDASPAGLLSI 161
            S  + T+ Q    P      AS  G  ++
Sbjct: 190 SSATITTAAQEVDQPDEHTEAASTTGFATV 219


>gi|115476422|ref|NP_001061807.1| Os08g0416000 [Oryza sativa Japonica Group]
 gi|75134805|sp|Q6ZA74.1|HOX5_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX5; AltName:
           Full=HD-ZIP protein HOX5; AltName: Full=Homeodomain
           transcription factor HOX5; AltName: Full=OsHox5
 gi|37573050|dbj|BAC98578.1| homeodomain leucine zipper protein [Oryza sativa Japonica Group]
 gi|113623776|dbj|BAF23721.1| Os08g0416000 [Oryza sativa Japonica Group]
 gi|125603415|gb|EAZ42740.1| hypothetical protein OsJ_27319 [Oryza sativa Japonica Group]
          Length = 349

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 21/150 (14%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 86  KKRRLTAEQVQMLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 141

Query: 77  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
           +   +  RL+A    L A +  L+ +NDRL+ QV  L            +  L  K+TS 
Sbjct: 142 QLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISL------------TEKLQDKETSP 189

Query: 134 ES--VVTSGQHHLTPQHPPRDASPAGLLSI 161
            S  + T+ Q    P      AS  G  ++
Sbjct: 190 SSATITTAAQEVDQPDEHTEAASTTGFATV 219


>gi|125591714|gb|EAZ32064.1| hypothetical protein OsJ_16252 [Oryza sativa Japonica Group]
          Length = 779

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 104 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 159

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S+L++ N KL A N
Sbjct: 160 HERHENSQLRSDNEKLRAEN 179



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 168/435 (38%), Gaps = 97/435 (22%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P +       +    PSG LI+  
Sbjct: 414 SPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVL-------KCRRRPSGCLIQEM 466

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----MAQEVTQ 352
             G S +  V+H++++  SV  + + L  S      +  +  L RQ  +    MA  +  
Sbjct: 467 PNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPT 526

Query: 353 SSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           S +    +  GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 527 SDIGVITSSEGRK--SMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 584

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 585 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEW-----DILSN 627

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
             I                   +  +AH     +    + L  V  S  +      M +L
Sbjct: 628 GGI-------------------VQEMAHIANGRDQGNCVSLLRVNSSNSNQSN---MLIL 665

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSS 576
           Q  C+    +A G+   +I+AP+D             D   LLPSGF I+P         
Sbjct: 666 QESCT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP--------- 710

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
                        GPA +    +         S++T+AF+   +S     ++  +   V 
Sbjct: 711 ------------DGPAHDGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVN 758

Query: 637 SIIS-SVQRVALALS 650
           S+I+ +V+R+  A+S
Sbjct: 759 SLIACTVERIKAAVS 773


>gi|350539483|ref|NP_001234657.1| cutin deficient 2 [Solanum lycopersicum]
 gi|255529749|gb|ACU12849.1| cutin deficient 2 [Solanum lycopersicum]
          Length = 821

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE L+ ECP P   +R +L +      ++E +Q+K WFQNRR + K  
Sbjct: 128 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL----SLETRQVKFWFQNRRTQMKTQ 183

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E S L+  N KL A N  + E
Sbjct: 184 LERHENSILRQENDKLRAENMSIRE 208



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 105/439 (23%), Positives = 176/439 (40%), Gaps = 88/439 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+     +G   V + S+  I+     P    F  +  LPSG
Sbjct: 446 AELQVLSPLVPIREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---TFPNSRRLPSG 502

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ-----M 346
            +++    G S +  V+H + E  +   + R L  +      +  +A L++  +     M
Sbjct: 503 CVVQDMPNGYSKVTWVEHAEYEEGANHHLYRQLISAGMGFGAQRWVATLQRQCECLAILM 562

Query: 347 AQEVT---QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVL 402
           +  V+    +++   GRR  ++  L+QR++  F   V   T   W  +    +D DV V+
Sbjct: 563 SSTVSARDHTAITPSGRR--SMLKLAQRMTNNFCAGVCASTVHKWNKLCAGNVDEDVRVM 620

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
              S D           G PA    VL A  S+ L  V P  L  FLR+   RSEW    
Sbjct: 621 TRKSVDD---------PGEPA--GIVLSAATSVWLP-VSPQRLFDFLRDERLRSEW---- 664

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            D+ S      GP               +  +AH  + ++    + L  +  S  +A   
Sbjct: 665 -DILSNG----GP---------------MQEMAHIAKGQDHGNCVSL--LRASAMNANQS 702

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSG 571
             + L + C     +A G  A +++AP+D            +    LLPSGF I+P   G
Sbjct: 703 SMLILHETCI----DAAG--ALVVYAPVDIPAMHVVMNGGNSAYVALLPSGFSIVPDGPG 756

Query: 572 KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMA 631
              S+             GP+ N   +   +      S++T+AF+    S     +   +
Sbjct: 757 SRGSN-------------GPSCNGGPDQRISG-----SLLTVAFQILVNSLPTAKLTVES 798

Query: 632 RQYVRSIIS-SVQRVALAL 649
            + V ++IS +VQ++  AL
Sbjct: 799 VETVNNLISCTVQKIKAAL 817


>gi|449436842|ref|XP_004136201.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis
           sativus]
          Length = 803

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 98  RYHRHTARQIQEMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 153

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
           ++ S     N  L A N+ L  EN RLQ  +  ++
Sbjct: 154 QDRSD----NVILRAENETLKNENYRLQSALRNII 184


>gi|449530931|ref|XP_004172445.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis
           sativus]
          Length = 812

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +
Sbjct: 98  RYHRHTARQIQEMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQ 153

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
           ++ S     N  L A N+ L  EN RLQ  +  ++
Sbjct: 154 QDRSD----NVILRAENETLKNENYRLQSALRNII 184



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 76/357 (21%), Positives = 131/357 (36%), Gaps = 71/357 (19%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLED-GSLVVCERSLKNIQNGPTMPPVQH-FVRAEMLP 289
           A L  L+ L P R+   LR      D GS  V +  + +  +      +QH F R    P
Sbjct: 412 AELQTLSPLVPTREAHFLRCCQQNADEGSWTVVDFPIDSFHDS-----LQHSFPRYRRKP 466

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQE 349
           SG +I+    G S +  V+H ++E   + ++      S         +A L++  +    
Sbjct: 467 SGCIIQDMPNGYSRVTWVEHAEIEEKPIHQIFNHFVHSGMAFGANRWLAILQRQCERIAS 526

Query: 350 VTQSSVNGWGRRPAA-----LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
           +   +++  G  P+      L  L+QR+ R F+  ++    + WT + +   D V +   
Sbjct: 527 LMARNISDLGVIPSPEARQNLMKLAQRMIRTFSVNISTSGGQSWTALSDSPEDTVRITTR 586

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS----EWADNN 460
              +             P   N V+ +  S      P   +   LR+ R     E   N 
Sbjct: 587 KVVE-------------PGQPNGVILSAVSTTWLPYPHYRVFDLLRDERRRSQLEVLSNG 633

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
             ++  A I  G  S PG+ +      V    +++ +H E M                  
Sbjct: 634 NSLHEVAHIANG--SHPGNCISLLRINVA---SNSSQHVELM------------------ 670

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPID------ASFADDA---PLLPSGFRIIPL 568
               L + C+    + V      ++A ID      A   +D    PLLP GF I+P+
Sbjct: 671 ----LQESCTDQSGSLV------VYATIDVDSIQLAMSGEDPSCIPLLPIGFSIVPI 717


>gi|226496749|ref|NP_001148520.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|195619978|gb|ACG31819.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|413922242|gb|AFW62174.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 272

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 14/158 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 132

Query: 77  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATK-DTS 132
           +   +  RL+A    L A ++ L+ +ND L+ QV  L  +      +  +TT A + D  
Sbjct: 133 QLETDYDRLKAAYDALAADHQGLLADNDNLRAQVISLTEKLQGKETYPSATTAAQEVDQP 192

Query: 133 CESVVTSGQHHLTPQ------HPPRDASPAGLLSIAEE 164
            E    SG   L  Q      H   D +  G LS  E+
Sbjct: 193 DEHTAVSGTEELLAQQLKDNLHSSGDCTGHGTLSSEED 230


>gi|255539515|ref|XP_002510822.1| homeobox protein, putative [Ricinus communis]
 gi|223549937|gb|EEF51424.1| homeobox protein, putative [Ricinus communis]
          Length = 799

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 7/83 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           KY R+TP Q++ LE  + ECP P   +R +L R       +E KQIK WFQNRR + K  
Sbjct: 103 KYHRHTPLQIQELEVCFKECPHPDEKQRLELSRRL----GLESKQIKFWFQNRRTQMKTQ 158

Query: 75  -QRKEASRLQAVNRKLTAMNKLL 96
            +R E   L+  N KL A N+LL
Sbjct: 159 LERHENIILRQENDKLRAENELL 181



 Score = 43.1 bits (100), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 95/443 (21%), Positives = 170/443 (38%), Gaps = 87/443 (19%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLK-NIQNGPTMPPVQHFVRAEMLP 289
           +A    ++ L P R    LR+     +G  VV + S+  N+++    P    F     LP
Sbjct: 417 NAEFQVVSPLVPVRQVRFLRFCKQHSEGVWVVVDVSIDANLESSNAHP----FAACRRLP 472

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQE 349
           SG +++    G S +  V+H + +  +V ++ R +  S      +  +A L++  +    
Sbjct: 473 SGCILQEMPNGCSKVTWVEHSEYDESAVHQLYRSILSSGKGFGAQRWVATLQRYCECMTI 532

Query: 350 VTQSSVNGWGRRPAALRA------LSQRLSRGFNEAVNGFTDEGWT--VMGNDGMDDVTV 401
           +   +++G  +   +L        L+QR+   F   V   +   W   ++GN G +DV +
Sbjct: 533 LMSPTISGEDQTVMSLSGKKSMLKLAQRMVDNFCSGVCASSLRKWDKLLVGNIG-EDVRI 591

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS--EWADN 459
           L           N++     P +   VL A  S+ L  V    L  FLR+ RS  EW   
Sbjct: 592 LTRK--------NINDPGEPPGI---VLSAATSVWLP-VMRQRLFDFLRDERSRCEW--- 636

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S                G     V +  +H+      + +++   V  +  D+  
Sbjct: 637 --DILSHG--------------GMLQEMVHISKSHS--RANCVSLLRSTAVSPNANDS-- 676

Query: 520 PRDMFLLQLCSGMDENAVGTCAEL-IFAPID---------ASFADDAPLLPSGFRIIPLD 569
              M +LQ      E      + L ++AP+D            +    LLPSGF I+P D
Sbjct: 677 --SMLILQ------ETWHDVASSLVVYAPVDIPSMSVVMNGGDSTYVALLPSGFVILPDD 728

Query: 570 SGKETSSP--NRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHV 627
           S  +  S   N TL                   S        ++T+ F+    +     +
Sbjct: 729 SSSQGGSNFCNGTL---------------VKRDSDGGDGGGCILTVGFQILVNNLPTAKL 773

Query: 628 ATMARQYVRSIIS-SVQRVALAL 649
              + + V ++IS ++QR+  AL
Sbjct: 774 TVESVETVNNLISCTIQRIKAAL 796


>gi|356511234|ref|XP_003524332.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 713

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 17/124 (13%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           +DG        +Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK W
Sbjct: 12  QDGSDSQERRKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFW 67

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV---------YENGY 116
           FQNRR + K + E    +A N  L A N  +  EN  +++ +  ++          ++ Y
Sbjct: 68  FQNRRTQMKAQHE----RADNCALRADNDKIRCENIAIREALKNVICPSCGGPPLNDDSY 123

Query: 117 FRQH 120
           F  H
Sbjct: 124 FNDH 127



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 101/446 (22%), Positives = 179/446 (40%), Gaps = 103/446 (23%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV---RAEMLPS 290
           L  L+ L   R+F+ LRY   +E G+  V + S          P   HF    R+   PS
Sbjct: 339 LQVLSPLVSTREFYFLRYCQQIEQGTWAVMDVSYD-------FPQDSHFAPQFRSHRCPS 391

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQKTTMAALRQLRQ---- 345
           G LI+    G S I  ++H+++E  ++P  L R L  S      +  +  L+++ +    
Sbjct: 392 GCLIQDMPDGHSKITWIEHVEIEDKTLPHRLYRNLIYSGMAFGAERWLTTLQRMCERFTY 451

Query: 346 --MAQEVTQSSVNGWGRRPAALRA---LSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVT 400
                  T+ ++ G    P   R+   L+QR+   F  +++  +   WT +       V 
Sbjct: 452 LMATSNPTRDNLGGVISSPEGKRSMMKLAQRMVTDFCASISTSSGHRWTTLSGLNEIVVR 511

Query: 401 VLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWAD 458
           V V+ S D             P   N V+ + A+ +    PP  +  F ++   R +W  
Sbjct: 512 VTVHKSSD-------------PGQPNGVVLSAATTIWLPTPPHTVFNFFKDENKRPQW-- 556

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
              DV S            G+ V     Q +  +A+ +     + V++     +S     
Sbjct: 557 ---DVLSN-----------GNAV-----QEVANIANGLHPGNCISVLR--AFNNS----- 590

Query: 519 MPRDMFLLQLCSGMDENAVGTCAEL-IFAPIDASFADDA---------PLLPSGFRIIPL 568
             ++M +LQ      E+ + +   L ++ P+D    + A         PLLP+GF I+P 
Sbjct: 591 --QNMLILQ------ESCIDSYGSLVVYCPVDLPSINTAVSGEDPSYIPLLPNGFTILP- 641

Query: 569 DSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMR---SVMTIAFEFAFESHMQE 625
                   P++             G+ A+ + +TN    R   S++TIAF+    S    
Sbjct: 642 -----DGQPDQ------------EGDGASTSSNTNRNIARSGGSLVTIAFQILVSSLPSA 684

Query: 626 HVATMARQYVRSII-SSVQRVALALS 650
            V   +   V ++I S+VQ++  +LS
Sbjct: 685 KVNMESVTTVNNLIGSTVQQIKSSLS 710


>gi|115474701|ref|NP_001060947.1| Os08g0136100 [Oryza sativa Japonica Group]
 gi|31339107|dbj|BAC77160.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113622916|dbj|BAF22861.1| Os08g0136100, partial [Oryza sativa Japonica Group]
          Length = 130

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
          +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 4  RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 59

Query: 75 -QRKEASRLQAVNRKLTAMN 93
           +R E + L+A N KL A N
Sbjct: 60 HERHENNALRAENEKLRAEN 79


>gi|15237948|ref|NP_197234.1| homeobox-leucine zipper protein HDG9 [Arabidopsis thaliana]
 gi|75309030|sp|Q9FFI0.1|HDG9_ARATH RecName: Full=Homeobox-leucine zipper protein HDG9; AltName:
           Full=HD-ZIP protein HDG9; AltName: Full=Homeodomain
           GLABRA 2-like protein 9; AltName: Full=Homeodomain
           transcription factor HDG9; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 9
 gi|10177077|dbj|BAB10519.1| homeobox protein [Arabidopsis thaliana]
 gi|332005030|gb|AED92413.1| homeobox-leucine zipper protein HDG9 [Arabidopsis thaliana]
          Length = 718

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 8/94 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
           Y R+T EQ+  LE  + ECP P   +R+ L  E     N++PKQIK WFQN+R + K   
Sbjct: 30  YHRHTNEQIHRLETYFKECPHPDEFQRRLLGEEL----NLKPKQIKFWFQNKRTQAKSHN 85

Query: 78  EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
           E    +A N  L A N  +  EN+ ++  ++ +V
Sbjct: 86  E----KADNAALRAENIKIRRENESMEDALNNVV 115


>gi|356529736|ref|XP_003533444.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Glycine max]
          Length = 807

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 8/98 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E L+ ECP P   +R +L  E      ++P+Q+K WFQNRR + K +
Sbjct: 95  RYHRHTARQIQEMEALFKECPHPDDKQRLKLSHEL----GLKPRQVKFWFQNRRTQMKAQ 150

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
           ++    +A N  L A N+ L  EN RLQ  +  ++  N
Sbjct: 151 QD----RADNVILRAENESLKSENYRLQAALRNVICPN 184


>gi|357507075|ref|XP_003623826.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355498841|gb|AES80044.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 778

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 9/86 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 94  RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 148

Query: 75  --QRKEASRLQAVNRKLTAMNKLLME 98
             +R E S L+  N KL A N  + E
Sbjct: 149 QLERHENSLLRQANDKLRAENMSIRE 174



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 98/440 (22%), Positives = 173/440 (39%), Gaps = 92/440 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+     +G   V + S+  I+      P   F+    LPSG
Sbjct: 405 AELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSIDTIRETSAGAPT--FLTCRRLPSG 462

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEV 350
            +++    G S +  V+H + E   V ++ RPL         +  +A L RQ   +A  +
Sbjct: 463 CVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSLGMGFGAQRWVATLQRQCECLAILM 522

Query: 351 T-------QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM--GNDGMDDVTV 401
           +        S+++  GRR  ++  L+ R++  F   V   T   W  +  GN G +DV V
Sbjct: 523 SSSLPSREHSAISAGGRR--SMLKLAHRMTNNFCAGVCASTVHKWNKLNAGNVG-EDVRV 579

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S D             P     ++ + A+ +     P  +  FLR    RSEW   
Sbjct: 580 MTRKSVDD------------PGEPPGIVLSAATSVWLPASPQKVFDFLRNEKLRSEW--- 624

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S      GP             Q +  +A   +H   + +++   +  S      
Sbjct: 625 --DILSNG----GPM------------QEMAHIAKGHDHGNCVSLLRASAINSSQS---- 662

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLDS 570
              M +LQ  S    +A G+   +++AP+D        +  D A   LLPSGF ++P   
Sbjct: 663 --SMLILQETS---TDASGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAVLP--- 712

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
                              G +     +  ++      S++T+AF+    S     +   
Sbjct: 713 ------------------DGHSNGSGNHEDASQPRVSGSLLTVAFQILVNSLPTAKLTVE 754

Query: 631 ARQYVRSIIS-SVQRVALAL 649
           + + V ++IS ++Q++ +AL
Sbjct: 755 SVETVNNLISCTIQKIKVAL 774


>gi|30678803|ref|NP_186976.2| homeobox-leucine zipper protein HDG8 [Arabidopsis thaliana]
 gi|187471152|sp|Q9M9P4.2|HDG8_ARATH RecName: Full=Homeobox-leucine zipper protein HDG8; AltName:
           Full=HD-ZIP protein HDG8; AltName: Full=Homeodomain
           GLABRA 2-like protein 8; AltName: Full=Homeodomain
           transcription factor HDG8; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 8
 gi|332640397|gb|AEE73918.1| homeobox-leucine zipper protein HDG8 [Arabidopsis thaliana]
          Length = 699

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 17/92 (18%)

Query: 15  NGKYV--RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           NGK    R+TP+Q++ LE  + ECP P   +R QL RE      +EP QIK WFQN+R +
Sbjct: 22  NGKRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCREL----KLEPDQIKFWFQNKRTQ 77

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQ 104
            K +++ S            N LL  EN+ LQ
Sbjct: 78  SKTQEDRS-----------TNVLLRGENETLQ 98


>gi|15209142|gb|AAK91875.1|AC091665_1 Putative homeodomain-leucine zipper protein [Oryza sativa]
          Length = 217

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/34 (76%), Positives = 31/34 (91%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQ 46
           +D+GKYV+YTP+QVEALER+Y ECPKPS  RRQQ
Sbjct: 155 MDSGKYVQYTPDQVEALERVYAECPKPSFCRRQQ 188


>gi|15219456|ref|NP_177479.1| homeobox-leucine zipper protein HDG11 [Arabidopsis thaliana]
 gi|75263138|sp|Q9FX31.1|HDG11_ARATH RecName: Full=Homeobox-leucine zipper protein HDG11; AltName:
           Full=HD-ZIP protein HDG11; AltName: Full=Homeodomain
           GLABRA 2-like protein 11; AltName: Full=Homeodomain
           transcription factor HDG11; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 11
 gi|11120798|gb|AAG30978.1|AC012396_14 homeobox protein, putative [Arabidopsis thaliana]
 gi|28393178|gb|AAO42020.1| putative homeobox protein [Arabidopsis thaliana]
 gi|28827208|gb|AAO50448.1| putative homeobox protein [Arabidopsis thaliana]
 gi|332197328|gb|AEE35449.1| homeobox-leucine zipper protein HDG11 [Arabidopsis thaliana]
          Length = 722

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T +Q++ LE  + ECP P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 35  RYHRHTAQQIQRLESSFKECPHPDEKQRNQLSREL----GLAPRQIKFWFQNRRTQLKAQ 90

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R + S L+A N K+   N  + E
Sbjct: 91  HERADNSALKAENDKIRCENIAIRE 115



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 139/368 (37%), Gaps = 90/368 (24%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           +  L+ L   R+F  LRY    E GS +V   S         +P      ++   PSG L
Sbjct: 351 MEVLSPLVATREFCELRYCQQTEQGSWIVVNVSYD-------LPQFVSHSQSYRFPSGCL 403

Query: 294 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALR---QLRQMAQEV 350
           I+    G S +  V+H++ E     E++  LY    ++ +     A R    L++M +  
Sbjct: 404 IQDMPNGYSKVTWVEHIETEE---KELVHELYRE--IIHRGIAFGADRWVTTLQRMCERF 458

Query: 351 TQSSVNGWGRR--------PAALRA---LSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
              SV     R        P   R+   L+QR+   +  +V+   +   TV+       +
Sbjct: 459 ASLSVPASSSRDLGGVILSPEGKRSMMRLAQRMISNYCLSVSRSNNTRSTVVSELNEVGI 518

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS--EWA 457
            V  + SP+          NG       VLCA  +  L N P  +   FL++ R+  +W 
Sbjct: 519 RVTAHKSPE---------PNG------TVLCAATTFWLPNSPQNV-FNFLKDERTRPQWD 562

Query: 458 --DNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
              N   V   A I  G  S PG+ +                      V++     HS  
Sbjct: 563 VLSNGNAVQEVAHISNG--SHPGNCIS---------------------VLRGSNATHS-- 597

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDA---------PLLPSGFRII 566
                 +M +LQ     + +   + A ++++P+D +  + A         PLL SGF I 
Sbjct: 598 -----NNMLILQ-----ESSTDSSGAFVVYSPVDLAALNIAMSGEDPSYIPLLSSGFTIS 647

Query: 567 PLDSGKET 574
           P  +G  +
Sbjct: 648 PDGNGSNS 655


>gi|449454863|ref|XP_004145173.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
          2-like [Cucumis sativus]
 gi|449474595|ref|XP_004154226.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
          2-like [Cucumis sativus]
 gi|449516709|ref|XP_004165389.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
          2-like [Cucumis sativus]
          Length = 696

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR---E 73
          +Y R+T  Q++ +E  + ECP P   +R+QL RE      +EP Q+K WFQN+R +   +
Sbjct: 21 RYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSREL----GLEPLQVKFWFQNKRTQIKAQ 76

Query: 74 KQRKEASRLQAVNRKLTAMN 93
          ++R E + L+A N KL A N
Sbjct: 77 QERHENAILKAQNEKLRAEN 96



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 92/430 (21%), Positives = 162/430 (37%), Gaps = 92/430 (21%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     +GS  V + SL  ++  PT        R    PSG LI+    
Sbjct: 332 LVPTRENYFVRYCKQQGEGSWAVVDVSLDYLRPTPTS-------RTRRRPSGCLIQELPN 384

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQS----- 353
           G S +  V+H++++  +V  + + +         K  MA L RQ +++    + +     
Sbjct: 385 GYSKVTWVEHVEVDDRAVHSLYKGVVTCGLAFGAKRWMATLGRQCQRLTNSSSTNIPALD 444

Query: 354 --SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLM 411
              V G   R + ++ L++R+ R F   V   T   WT +     DDV V+   S D   
Sbjct: 445 ICVVTGQEGRKSVMK-LAERMVRSFCSGVGAATAHNWTTLSTIDSDDVRVMARKSLDD-- 501

Query: 412 GLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAAI 469
                     P     ++   A+     +PP  +  FLR+   R++W     D+ S   +
Sbjct: 502 ----------PGRPPGIVLNAATSFWIPIPPNRVFNFLRDQNTRNQW-----DILSNGGL 546

Query: 470 KVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLC 529
                            Q +  + +       + ++++     S        +M +LQ  
Sbjct: 547 ----------------VQEMARIGNDRNSGNCVSLLRVNSANSSQS------NMLILQES 584

Query: 530 SGMDENAVGTCAELIFAPIDASFA---------DDAPLLPSGFRIIPLDSGKETSSPNRT 580
              D +     + +I+AP+D +           D   LLPSGF I+P             
Sbjct: 585 CSDDISG----SYIIYAPVDTAAMNMVLSGGDPDYVALLPSGFAILPDGPPIGPEG---- 636

Query: 581 LDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIIS 640
                 LE G  G               S++T+AF+   +S     ++  +   V S+I 
Sbjct: 637 --PPGILEFGAGG---------------SLLTVAFQILVDSVPTAKLSLGSVATVNSLIK 679

Query: 641 -SVQRVALAL 649
            +V+R+  AL
Sbjct: 680 CTVERIRAAL 689


>gi|115448457|ref|NP_001048008.1| Os02g0729700 [Oryza sativa Japonica Group]
 gi|75132062|sp|Q6YWR4.1|HOX16_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX16; AltName:
           Full=HD-ZIP protein HOX16; AltName: Full=Homeodomain
           transcription factor HOX16; AltName: Full=OsHox16
 gi|46390454|dbj|BAD15915.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|46390850|dbj|BAD16354.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|113537539|dbj|BAF09922.1| Os02g0729700 [Oryza sativa Japonica Group]
 gi|125583560|gb|EAZ24491.1| hypothetical protein OsJ_08251 [Oryza sativa Japonica Group]
 gi|215767479|dbj|BAG99707.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 343

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 132

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++  RL+A    L A +  L+++N RL  QV  L 
Sbjct: 133 QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLT 170


>gi|187471148|sp|A2X980.1|HOX16_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX16; AltName:
           Full=HD-ZIP protein HOX16; AltName: Full=Homeodomain
           transcription factor HOX16; AltName: Full=OsHox16
 gi|125540995|gb|EAY87390.1| hypothetical protein OsI_08797 [Oryza sativa Indica Group]
          Length = 345

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 79  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 134

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++  RL+A    L A +  L+++N RL  QV  L 
Sbjct: 135 QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLT 172


>gi|5050910|emb|CAB45018.1| homeodomain GLABRA2 like 1 protein [Arabidopsis thaliana]
          Length = 808

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE ++ EC  P   +R  L R      N++P+Q+K WFQNRR + K  
Sbjct: 113 RYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRL----NLDPRQVKFWFQNRRTQMKTQ 168

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+  N KL A N  + E
Sbjct: 169 IERHENALLRQENDKLRAENMSVRE 193



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 173/448 (38%), Gaps = 105/448 (23%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R    LR+     +G   V + S+ +I+ G +            LPSG
Sbjct: 431 AELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS-------CRRLPSG 483

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ-----M 346
            L++    G S +  ++H + +   +  + RPL            MAAL++  +     M
Sbjct: 484 CLVQDMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILM 543

Query: 347 AQEVTQSS----VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           +  V+ S+    +N  GR+  ++  L++R++  F   V   + + W+ +    +D DV +
Sbjct: 544 SSTVSTSTNPSPINCNGRK--SMLKLAKRMTDNFCGGVCASSLQKWSKLNVGNVDKDVRI 601

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S +             P     ++   A+ +   V P  L  FL     RSEW   
Sbjct: 602 MTRKSVNN------------PGEPPGIILNAATSVWMPVSPRRLFDFLGNERLRSEW--- 646

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIE-HEEFMEVIKLEGVGHSPEDAI 518
             D+ S      GP               +  +AH  + H+    V  L     +   + 
Sbjct: 647 --DILSNG----GP---------------MKEMAHIAKGHDRSNSVSLLRASAINANQS- 684

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLD 569
               M +LQ  S    +A G  A +++AP+D        +  D A   LLPSGF I+P  
Sbjct: 685 ---SMLILQETS---IDAAG--AVVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILP-- 734

Query: 570 SGKETSSPNRTLDLASALEIGPAGNR----ATNNYSTNSTCMR---SVMTIAFEFAFESH 622
                               G AG +       N   N  CM    S++T+AF+    S 
Sbjct: 735 -------------------NGQAGTQRCAAEERNSIGNGGCMEEGGSLLTVAFQILVNSL 775

Query: 623 MQEHVATMARQYVRSIIS-SVQRVALAL 649
               +   + + V ++IS +VQ++  AL
Sbjct: 776 PTAKLTVESVETVNNLISCTVQKIKAAL 803


>gi|15233048|ref|NP_191674.1| homeobox-leucine zipper protein HDG1 [Arabidopsis thaliana]
 gi|75335834|sp|Q9M2E8.1|HDG1_ARATH RecName: Full=Homeobox-leucine zipper protein HDG1; AltName:
           Full=HD-ZIP protein HDG1; AltName: Full=Homeodomain
           GLABRA 2-like protein 1; AltName: Full=Homeodomain
           transcription factor HDG1; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 1
 gi|6850882|emb|CAB71045.1| homeobox protein [Arabidopsis thaliana]
 gi|15292865|gb|AAK92803.1| putative homeobox protein [Arabidopsis thaliana]
 gi|20465805|gb|AAM20391.1| putative homeobox protein [Arabidopsis thaliana]
 gi|332646640|gb|AEE80161.1| homeobox-leucine zipper protein HDG1 [Arabidopsis thaliana]
          Length = 808

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE ++ EC  P   +R  L R      N++P+Q+K WFQNRR + K  
Sbjct: 113 RYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRL----NLDPRQVKFWFQNRRTQMKTQ 168

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+  N KL A N  + E
Sbjct: 169 IERHENALLRQENDKLRAENMSVRE 193



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 173/448 (38%), Gaps = 105/448 (23%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R    LR+     +G   V + S+ +I+ G +            LPSG
Sbjct: 431 AELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS-------CRRLPSG 483

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ-----M 346
            L++    G S +  ++H + +   +  + RPL            MAAL++  +     M
Sbjct: 484 CLVQDMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILM 543

Query: 347 AQEVTQSS----VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           +  V+ S+    +N  GR+  ++  L++R++  F   V   + + W+ +    +D DV +
Sbjct: 544 SSTVSTSTNPSPINCNGRK--SMLKLAKRMTDNFCGGVCASSLQKWSKLNVGNVDEDVRI 601

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S +             P     ++   A+ +   V P  L  FL     RSEW   
Sbjct: 602 MTRKSVNN------------PGEPPGIILNAATSVWMPVSPRRLFDFLGNERLRSEW--- 646

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIE-HEEFMEVIKLEGVGHSPEDAI 518
             D+ S      GP               +  +AH  + H+    V  L     +   + 
Sbjct: 647 --DILSNG----GP---------------MKEMAHIAKGHDRSNSVSLLRASAINANQS- 684

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLD 569
               M +LQ  S    +A G  A +++AP+D        +  D A   LLPSGF I+P  
Sbjct: 685 ---SMLILQETS---IDAAG--AVVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILP-- 734

Query: 570 SGKETSSPNRTLDLASALEIGPAGNR----ATNNYSTNSTCMR---SVMTIAFEFAFESH 622
                               G AG +       N   N  CM    S++T+AF+    S 
Sbjct: 735 -------------------NGQAGTQRCAAEERNSIGNGGCMEEGGSLLTVAFQILVNSL 775

Query: 623 MQEHVATMARQYVRSIIS-SVQRVALAL 649
               +   + + V ++IS +VQ++  AL
Sbjct: 776 PTAKLTVESVETVNNLISCTVQKIKAAL 803


>gi|255541474|ref|XP_002511801.1| homeobox protein, putative [Ricinus communis]
 gi|223548981|gb|EEF50470.1| homeobox protein, putative [Ricinus communis]
          Length = 825

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 125 RYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 179

Query: 75  --QRKEASRLQAVNRKLTAMN 93
             +R E S L+  N KL A N
Sbjct: 180 QLERHENSLLRQENDKLRAEN 200



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 145/365 (39%), Gaps = 70/365 (19%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+     +G   V + S+  I+     P    F     LPSG
Sbjct: 445 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGGPA---FANCRRLPSG 501

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEV 350
            +++    G S +  V+H + +   + ++ RPL  S      +  +A L RQ   +A  +
Sbjct: 502 CVVQDMPNGYSKVTWVEHAEYDESPIHQLYRPLISSGMGFGAQRWVATLQRQCECLAILM 561

Query: 351 TQS--------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           + +        ++   GRR  ++  L+QR++  F   V   T   W  +    +D DV V
Sbjct: 562 SSTVPARDHTAAITASGRR--SMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRV 619

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S D             P     ++ + A+ +   V P  L  FLR+   RSEW   
Sbjct: 620 MTRKSVDD------------PGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEW--- 664

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S      GP               +  +AH  + ++    + L  +  S  +A  
Sbjct: 665 --DILSNG----GP---------------MQEMAHIAKGQDHGNCVSL--LRASAMNANQ 701

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLDS 570
              + L + C     +A G+   +++AP+D        +  D A   LLPSGF I+P   
Sbjct: 702 SSMLILQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGP 755

Query: 571 GKETS 575
           G   S
Sbjct: 756 GSRGS 760


>gi|224077468|ref|XP_002305259.1| predicted protein [Populus trichocarpa]
 gi|222848223|gb|EEE85770.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 15/90 (16%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           N  Y R++ +Q+  LE+ + ECP P   +R+QL RE      +E KQIK WFQN+R ++K
Sbjct: 21  NKAYHRHSNQQIHQLEKFFKECPHPDENQRRQLSREL----GLEAKQIKFWFQNKRTQKK 76

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQ 104
            + E            A N +L  EN+R+Q
Sbjct: 77  AQSE-----------RADNSVLRLENERIQ 95



 Score = 40.4 bits (93), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNG-PTMPPVQHFVRAEMLPSGY 292
           ++ L+ L P R+F+ LR    LE G  V+ + S   +++G P+        RA  LPSG 
Sbjct: 313 MHILSPLVPPREFYFLRLCQQLEPGEWVIADISYDFMRDGSPS--------RAWRLPSGC 364

Query: 293 LIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQKTTMAALRQL 343
           +I+    G S +  V+H++++  +    L R L    +    +  +A+LR++
Sbjct: 365 MIQDKSNGCSKVTWVEHVEVDDRTQTHRLYRDLICGRSAYGAERWIASLRRI 416


>gi|297817426|ref|XP_002876596.1| hypothetical protein ARALYDRAFT_324546 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322434|gb|EFH52855.1| hypothetical protein ARALYDRAFT_324546 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 811

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE ++ EC  P   +R  L R      N++P+Q+K WFQNRR + K  
Sbjct: 116 RYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRL----NLDPRQVKFWFQNRRTQMKTQ 171

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+  N KL A N  + E
Sbjct: 172 IERHENALLRQENDKLRAENMSVRE 196



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 98/443 (22%), Positives = 173/443 (39%), Gaps = 93/443 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R    LR+     +G   V + S+ +I+ G +            LPSG
Sbjct: 432 AELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSS-------SSCRRLPSG 484

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ-----M 346
            L++    G S +  ++H + +   +  + RPL            MAAL++  +     M
Sbjct: 485 CLVQDMANGCSKVTWIEHTEYDENRIHRLYRPLLSCGLAFGAHRWMAALQRQCECLTILM 544

Query: 347 AQEVTQS----SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           +  V+ S     +N  GR+  ++  L++R++  F   V   + + W+ +    +D DV +
Sbjct: 545 SSTVSPSPNPTPINCNGRK--SMLKLAKRMTDNFCGGVCASSLQKWSKLNVGNVDEDVRI 602

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S +             P     ++   A+ +   + P  L  FL     RSEW   
Sbjct: 603 MTRKSVNN------------PGEPPGIILNAATSVWMPISPRRLFDFLGNERLRSEW--- 647

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S      GP             + +  +A   +H   + +++   +  +      
Sbjct: 648 --DILSNG----GPM------------KEMAHIAKGHDHSNSVSLLRASAINANQS---- 685

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLDS 570
              M +LQ  S    +A G  A +++AP+D        +  D A   LLPSGF I+P   
Sbjct: 686 --SMLILQETS---IDAAG--ALVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILP--- 735

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMR---SVMTIAFEFAFESHMQEHV 627
                        A A     A      N + N  CM    S++T+AF+    S     +
Sbjct: 736 ------------NAQAGTQRCAAEERNANGNGNGGCMEEGGSLLTVAFQILVNSLPTAKL 783

Query: 628 ATMARQYVRSIIS-SVQRVALAL 649
              + + V ++IS +VQ++  AL
Sbjct: 784 TVESVETVNNLISCTVQKIKAAL 806


>gi|224120056|ref|XP_002318231.1| predicted protein [Populus trichocarpa]
 gi|222858904|gb|EEE96451.1| predicted protein [Populus trichocarpa]
          Length = 734

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           KY R+T  Q++ LE  + ECP P   +R +L R       +E KQIK WFQNRR + K  
Sbjct: 40  KYNRHTANQIQELESFFKECPHPDEKQRSELSRRL----GLESKQIKFWFQNRRTQMKTQ 95

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E   L+  N KL   N+LL +
Sbjct: 96  LERHENVILRQDNDKLRLENELLKQ 120



 Score = 42.7 bits (99), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 30/232 (12%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLK-NIQNGPTMPPVQHFVRAEMLPSGYLIR 295
           ++   P R    LR    L +G   V + S+  N +N     PV      + LPSG +I+
Sbjct: 359 ISPFVPVRQVKFLRLCKQLTEGVWAVVDVSIDANQENLNAQAPVT----CKRLPSGCIIQ 414

Query: 296 PCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVT--- 351
               G S +  V+H + +  +V ++ RP+  S      +  +AAL R    MA  ++   
Sbjct: 415 DMNNGCSKVTWVEHSEYDESAVHQLYRPILSSGRGFGAQRWLAALQRYYEGMAMIMSPSI 474

Query: 352 ----QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW-TVMGNDGMDDVTVLVNSS 406
               Q+ +N  G++  ++  L++R+   F   V   +   W  ++  +  +DV +L   S
Sbjct: 475 LGEDQTVINLGGKK--SMLKLARRMVDNFCSGVCASSLHNWGNLVAGNVSEDVRILTRKS 532

Query: 407 PDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
            ++            P   + ++ + A+ +   V    L  FLR+   RS W
Sbjct: 533 INE------------PGEPDGIVLSAATSVWLPVSRQRLFDFLRDEQSRSHW 572


>gi|356575937|ref|XP_003556092.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 731

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K  
Sbjct: 35  RYHRHTPHQIQELEAFFKECPHPDEKQRLDLSKRL----GLENKQVKFWFQNRRTQMKTQ 90

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E   L+  N KL A N L+ E
Sbjct: 91  LERHENIMLRQENDKLRAENSLIKE 115



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 140/352 (39%), Gaps = 71/352 (20%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           L+ L P R    +R+     +G   V + S   I+ G      Q  +    LPSG +++ 
Sbjct: 360 LSPLVPVRQVRFIRFCKQHAEGVWAVVDVS---IEIGHDAANAQPSISCRRLPSGCIVQD 416

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA-------Q 348
              G S +  ++H + +   V ++ RPL  S         +A L RQ   +A        
Sbjct: 417 MPNGYSKVTWLEHWEYDENVVHQLYRPLLSSGVGFGAHRWIATLQRQCECLAILMSSSIS 476

Query: 349 EVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM--GNDGMDDVTVLVNSS 406
             + ++++  GRR  ++  L+QR++  F   V   +   W  +  G  G DD+ V+   +
Sbjct: 477 SDSHTALSQAGRR--SMLKLAQRMTSNFCSGVCASSARKWDSLHIGTLG-DDMKVMTRKN 533

Query: 407 PDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVY 464
            D             P     ++ + A+ +   V    L  FLR+   RSEW     D+ 
Sbjct: 534 VDD------------PGEPPGIVLSAATSVWMPVSRQRLFDFLRDERLRSEW-----DIL 576

Query: 465 SAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMF 524
           S      GP             Q ++ +A    H   + +++   V  +         M 
Sbjct: 577 SNG----GPM------------QEMVHIAKGQGHGNCVSLLRANAVNANDS------SML 614

Query: 525 LLQLCSGMDENAVGTCAELIFAPIDA-------SFADDA--PLLPSGFRIIP 567
           +LQ  + MD     +C+ +++AP+D        S  D A   LLPSGF I+P
Sbjct: 615 ILQE-TWMD----ASCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILP 661


>gi|293336846|ref|NP_001169496.1| uncharacterized protein LOC100383369 [Zea mays]
 gi|224029677|gb|ACN33914.1| unknown [Zea mays]
          Length = 339

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 74  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 129

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++  RL+A    L A +  L+++N RL+ QV  L 
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNHRLRSQVVSLT 167


>gi|2388574|gb|AAB71455.1| Strong similarity to Phalaenopsis homeobox protein (gb|U34743)
           [Arabidopsis thaliana]
          Length = 749

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 142/381 (37%), Gaps = 90/381 (23%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           SA     + L P R+ +  RY     DGS  V + SL ++Q  P         R     S
Sbjct: 373 SAEFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQPNPP-------ARCRRRAS 425

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQ- 348
           G LI+    G S +  V+H++++   V  + + +  +      K  +A L RQ  ++A  
Sbjct: 426 GCLIQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASV 485

Query: 349 --------EVTQSS-------------VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEG 387
                   EV +S               N  GRR  ++  L++R+   F   V+  T   
Sbjct: 486 MATNISSGEVGESESESQFYINEYAVITNQEGRR--SMLKLAERMVISFCAGVSASTAHT 543

Query: 388 WTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLR 447
           WT +   G +DV V+   S D             P     ++ + A+     VPP  +  
Sbjct: 544 WTTLSGTGAEDVRVMTRKSVDD------------PGRPPGIVLSAATSFWIPVPPKRVFD 591

Query: 448 FLREH--RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVI 505
           FLR+   R+EW     D+ S                      V+  +AH     +    +
Sbjct: 592 FLRDENSRNEW-----DILSNGG-------------------VVQEMAHIANGRDTGNCV 627

Query: 506 KLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDA 556
            L    +S +  ++     L + C+        T + +I+AP+D             D  
Sbjct: 628 SLLRSANSSQSNML----ILQESCTD------PTASFVIYAPVDIVAMNIVLNGGDPDYV 677

Query: 557 PLLPSGFRIIPLDSGKETSSP 577
            LLPSGF I+P D    + +P
Sbjct: 678 ALLPSGFAILP-DGNANSGAP 697



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 7/68 (10%)

Query: 29  LERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAV 85
           L R + ECP P   +R+QL RE     N+EP Q+K WFQN+R + K   +R E S L+A 
Sbjct: 95  LNRFFKECPHPDDKQRKQLSREL----NLEPLQVKFWFQNKRTQMKNHHERHENSHLRAE 150

Query: 86  NRKLTAMN 93
           N KL   N
Sbjct: 151 NEKLRNDN 158


>gi|115481134|ref|NP_001064160.1| Os10g0147300 [Oryza sativa Japonica Group]
 gi|113638769|dbj|BAF26074.1| Os10g0147300 [Oryza sativa Japonica Group]
          Length = 108

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/34 (76%), Positives = 31/34 (91%)

Query: 13 LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQ 46
          +D+GKYV+YTP+QVEALER+Y ECPKPS  RRQQ
Sbjct: 46 MDSGKYVQYTPDQVEALERVYAECPKPSFCRRQQ 79


>gi|177667009|gb|ACB73218.1| homeodomain protein GL2-like 1 [Gossypium hirsutum]
          Length = 772

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 176/440 (40%), Gaps = 87/440 (19%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           +A L  L+ L P R+   LR+     +G   V + S+  I+   T      FV    LPS
Sbjct: 395 NAELQILSPLVPVREVSFLRFCKQHAEGVWAVVDVSVDTIKESTT------FVTCRRLPS 448

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
           G +++    G S +   +H + +   V ++ RPL  S      +  +AAL RQ   +A  
Sbjct: 449 GCVVQDMPNGYSKVIWAEHAEYDESQVHQLYRPLLSSGVGFGAQRWVAALQRQCECLAIL 508

Query: 350 VT-------QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           ++        +++   GRR  ++  L+QR++  F   V   T   W  +    +D DV V
Sbjct: 509 MSSTVPTRDHTAITASGRR--SMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRV 566

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHR--SEWADN 459
           +   S D             P     ++ + A+ +   V P  L  FLR  R  SEW   
Sbjct: 567 MTRKSIDD------------PGEPPGIVLSAATSVWLPVSPQRLFDFLRNERLRSEW--- 611

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S      GP               +  +AH  + ++    + L  +  S  +A  
Sbjct: 612 --DILSNG----GP---------------MQEMAHIAKGQDHGNCVSL--LRASAMNANQ 648

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLDS 570
              + L + C     +A G+   +++AP+D        +  D A   LLPSGF I+P   
Sbjct: 649 SSMLILQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP--D 700

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
           G  +  P               G+   N    +S+   S +T+AF+    S     +   
Sbjct: 701 GPRSHGPISN------------GHVNGNTGGGSSSVGGSPLTVAFQILVNSSPTAKLTVE 748

Query: 631 ARQYVRSIIS-SVQRVALAL 649
           + + V ++IS +VQ++  AL
Sbjct: 749 SVETVNNLISCTVQKIKAAL 768



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 93  RYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 147

Query: 75  --QRKEASRLQAVNRKLTAMN 93
             +R E S L+  N KL A N
Sbjct: 148 QLERHENSLLRQENDKLRAEN 168


>gi|51872287|gb|AAU12247.1| homeodomain protein HOX3 [Gossypium hirsutum]
          Length = 713

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K   
Sbjct: 31  YHRHTAHQIQRLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQH 86

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R + S L+A N K+   N  + E
Sbjct: 87  ERADNSALRAENDKIRCENIAIRE 110



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 141/375 (37%), Gaps = 87/375 (23%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           L  L+ L P R+F+ LRY   +E G   +   S         +P      R+  LPSG L
Sbjct: 343 LQVLSPLVPTREFYTLRYCQQIEQGLWAIVNVSYD-------LPQFASQCRSHRLPSGCL 395

Query: 294 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQ 352
           I+    G S +  ++ +++E  + +  + R L  S +    +  +  L+++ +    +  
Sbjct: 396 IQDMPNGYSKVTWLERVEIEDKTPIHRLYRDLVHSGSAFGAERWLTTLQRMCEWFACLRV 455

Query: 353 SSVNGW----------GRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           SS +            GRR  ++  L+QR+   F  +V        T +       V V 
Sbjct: 456 SSTSTRDLGGVIPSPEGRR--SMMKLAQRMVNNFCTSVGTSNSHRSTTLSGSNEVGVRVT 513

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS--EWA--D 458
           V+ S D             P   N ++ + A+     V P  +  F ++ R+  +W    
Sbjct: 514 VHKSSD-------------PGQPNGIVLSAATTFWLPVSPQNVFNFFKDERTRPQWDVLS 560

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
           N   V   A I  G  S PG+ +                      V++     H+     
Sbjct: 561 NGNAVQEVAHIANG--SHPGNCIS---------------------VLRAFNTSHN----- 592

Query: 519 MPRDMFLLQLCSGMDENAVGTCAEL-IFAPIDASFADDA---------PLLPSGFRIIP- 567
              +M +LQ      E+ + +   L ++ P+D    + A         PLLPSGF I P 
Sbjct: 593 ---NMLILQ------ESCIDSSGSLVVYCPVDLPAINVAMSGEDPSYIPLLPSGFTITPD 643

Query: 568 --LDSGKETSSPNRT 580
             L+ G   S+ + T
Sbjct: 644 GHLEQGDGASTSSST 658


>gi|413923850|gb|AFW63782.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 339

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 74  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 129

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++  RL+A    L A +  L+++N RL+ QV  L 
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNHRLRSQVVSLT 167


>gi|147820899|emb|CAN60897.1| hypothetical protein VITISV_008020 [Vitis vinifera]
          Length = 461

 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 25/144 (17%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           +DG         Y R+TP+Q++ LE  + +CP P   +R+QL RE      +E +QIK W
Sbjct: 14  QDGPNPRRGRKVYNRHTPQQIQRLEAFFKDCPHPDEAQRRQLGREL----GLESRQIKFW 69

Query: 66  FQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME----------------ENDRLQKQ 106
           FQN+R + K   +R + + L+A N ++   N  + E                E +R Q+ 
Sbjct: 70  FQNKRTQTKTQHERADNTALRAENERIQCENLAIREALKNVICPSCGGPPFGEXER-QRN 128

Query: 107 VSQLVYENGYFR-QHTQSTTLATK 129
           + +L  EN   + +H + + L  K
Sbjct: 129 IEKLQLENAQLKEEHEKVSNLLAK 152


>gi|449530169|ref|XP_004172068.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like, partial [Cucumis sativus]
          Length = 468

 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 102 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 157

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E ++L+  N KL A N
Sbjct: 158 HERHENTQLRTENEKLRADN 177


>gi|297608080|ref|NP_001061150.2| Os08g0187500 [Oryza sativa Japonica Group]
 gi|255678202|dbj|BAF23064.2| Os08g0187500 [Oryza sativa Japonica Group]
          Length = 326

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 109 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 164

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E ++L+A N KL A N    E
Sbjct: 165 HERHENAQLRAENDKLRAENMRYKE 189


>gi|449534134|ref|XP_004174022.1| PREDICTED: homeobox-leucine zipper protein ROC2-like, partial
           [Cucumis sativus]
          Length = 169

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R +L RE      +EP Q+K WFQN+R + K  
Sbjct: 52  RYNRHTQHQIQEMEAFFKECPHPDDKQRMELSREL----GLEPLQVKFWFQNKRTQMKAQ 107

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E + L+A N KL A N
Sbjct: 108 HERHENAILKAENEKLRAEN 127


>gi|222612441|gb|EEE50573.1| hypothetical protein OsJ_30722 [Oryza sativa Japonica Group]
          Length = 178

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/34 (76%), Positives = 31/34 (91%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQ 46
           +D+GKYV+YTP+QVEALER+Y ECPKPS  RRQQ
Sbjct: 116 MDSGKYVQYTPDQVEALERVYAECPKPSFCRRQQ 149


>gi|14587301|dbj|BAB61212.1| putative homeobox protein GLABRA2 [Oryza sativa Japonica Group]
          Length = 779

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 105/468 (22%), Positives = 166/468 (35%), Gaps = 109/468 (23%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T EQ+  +E L+ E P P   +RQQ+ ++      +  +Q+K WFQNRR + K   
Sbjct: 99  YHRHTAEQIRIMEALFKESPHPDERQRQQVSKQL----GLSARQVKFWFQNRRTQIKAVQ 154

Query: 75  QRKEASRLQAVNRKLTAMNKLLME-----------------------------ENDRLQK 105
           +R E S L++   KL   ++ + E                                RL+ 
Sbjct: 155 ERHENSLLKSELEKLQDEHRAMRELAKKPSRCLNCGVVATSSDAAAAATAADTREQRLRL 214

Query: 106 QVSQLVYENGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPP----------RDASP 155
           + ++L  E    R  T   + A    S     ++G      + PP           D   
Sbjct: 215 EKAKLKAEIERLR-GTPGKSAADGIASPPCSASAGAMQTNSRSPPLHDHDGGFLRHDDDK 273

Query: 156 AGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD------SVGIVAISHGCSG----- 204
             +L +A   L E +   +     WV+  G++ G D       V +    HG SG     
Sbjct: 274 PRILELATRALDELVGMCSSGEPVWVR--GVETGRDILNYDEYVRLFRRDHGGSGDQMAG 331

Query: 205 ---VAARACGLVGLE------------------PTRVA-----EILKDRPRGS------- 231
               A+R CGLV L+                  PT ++     E++ +R           
Sbjct: 332 WTVEASRECGLVYLDTMHLVHTFMDVDKWKDLFPTMISKAATLEMISNREDDGRDGVLQL 391

Query: 232 --AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLP 289
             A L  LT + P R+ +  RY   L      + + S    + G         VR    P
Sbjct: 392 MYAELQTLTPMVPTRELYFARYCKKLAAERWAIVDVSFDESETGVH---ASSAVRCWKNP 448

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLR 344
           SG LI     G   +  V+H      +V  + R +  S      +  +AAL     R + 
Sbjct: 449 SGCLIEEQNNGRCKMTWVEHTRCRRCTVAPLYRAVTASGVAFGARRWVAALQLQCERMVF 508

Query: 345 QMAQEVTQSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGW 388
            +A  V      G     GRR  ++  L+ R++        G  D  W
Sbjct: 509 AVATNVPTRDSTGVSTLAGRR--SVLKLAHRMTSSLCRTTGGSCDMAW 554


>gi|449445947|ref|XP_004140733.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
          Length = 706

 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 25/132 (18%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+ P Q++ LE  + +CP P   +R+QL RE      +E KQIK WFQN+R + K   
Sbjct: 27  YHRHNPYQIQQLESFFRQCPHPDENQRRQLSREL----GLETKQIKFWFQNKRTQTKAQN 82

Query: 75  QRKEASRLQAVNRKLTAMNKLLME----------------ENDRLQKQVSQLVYENGYFR 118
           +R + S L+  N K+   N  + E                E +R Q+ + +L  EN + +
Sbjct: 83  ERADNSSLRTENEKIQCENLAIREALRNVICPSCGGPPFGEEER-QRNLQKLRLENSHLK 141

Query: 119 -QHTQSTTLATK 129
            +H + + L  K
Sbjct: 142 EEHEKVSNLLAK 153


>gi|42562138|ref|NP_564041.2| homeobox-leucine zipper protein HDG12 [Arabidopsis thaliana]
 gi|75264044|sp|Q9LMT8.1|HDG12_ARATH RecName: Full=Homeobox-leucine zipper protein HDG12; AltName:
           Full=HD-ZIP protein HDG12; AltName: Full=Homeodomain
           GLABRA 2-like protein 12; AltName: Full=Homeodomain
           transcription factor HDG12; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 12
 gi|9665069|gb|AAF97271.1|AC034106_14 Strong similarity to meristem L1 layer homeobox protein (ATML1)
           from Arabidopsis thaliana gb|U37589 and contains
           Transposase PF|01527, Homeobox PF|00046, and START
           PF|01852 domains. EST gb|AI995645 comes from this gene
           [Arabidopsis thaliana]
 gi|225897942|dbj|BAH30303.1| hypothetical protein [Arabidopsis thaliana]
 gi|332191531|gb|AEE29652.1| homeobox-leucine zipper protein HDG12 [Arabidopsis thaliana]
          Length = 687

 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 15/88 (17%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           ++ R+TP Q++ LE  ++EC  P   +R QL RE      + P+QIK WFQNRR ++K +
Sbjct: 24  RFHRHTPHQIQRLESTFNECQHPDEKQRNQLSREL----GLAPRQIKFWFQNRRTQKKAQ 79

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQ 104
            E            A N  L EEND+++
Sbjct: 80  HER-----------ADNCALKEENDKIR 96



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 140/361 (38%), Gaps = 77/361 (21%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           L  L+ L   R+F +LRY   +E G+  +   S +        P      R+   PSG L
Sbjct: 331 LQVLSPLVTTREFCVLRYCQQIEHGTWAIVNVSYE-------FPQFISQSRSYRFPSGCL 383

Query: 294 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQ 352
           I+    G S +  V+H + E    + E+ + +         +  +A L+++ +    + +
Sbjct: 384 IQDMSNGYSKVTWVEHGEFEEQEPIHEMFKDIVHKGLAFGAERWIATLQRMCERFTNLLE 443

Query: 353 ---SSVNGWGRRPA-----ALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
              SS++  G  P+     ++  L+ R+   F  +V    +   TV+   G+D+  + V 
Sbjct: 444 PATSSLDLGGVIPSPEGKRSIMRLAHRMVSNFCLSVGTSNNTRSTVVS--GLDEFGIRVT 501

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS--EWA--DNN 460
           S   +         NG       VLCA  S  L  + P  +  FL++ R+  +W    N 
Sbjct: 502 SHKSR------HEPNGM------VLCAATSFWLP-ISPQNVFNFLKDERTRPQWDVLSNG 548

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
             V   A I  G  S PG+ +                         L G   S       
Sbjct: 549 NSVQEVAHITNG--SNPGNCISV-----------------------LRGFNASSSQ---- 579

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDA---------PLLPSGFRIIPLDSG 571
            +M +LQ  S +D ++    A +I+ P+D    + A         P+LPSGF I P  S 
Sbjct: 580 NNMLILQE-SCIDSSSA---ALVIYTPVDLPALNIAMSGQDTSYIPILPSGFAISPDGSS 635

Query: 572 K 572
           K
Sbjct: 636 K 636


>gi|413923851|gb|AFW63783.1| putative homeobox DNA-binding and leucine zipper domain family
           protein isoform 1 [Zea mays]
 gi|413923852|gb|AFW63784.1| putative homeobox DNA-binding and leucine zipper domain family
           protein isoform 2 [Zea mays]
          Length = 299

 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 34  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 89

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++  RL+A    L A +  L+++N RL+ QV  L 
Sbjct: 90  QLERDFDRLKASFDALRADHDALLQDNHRLRSQVVSLT 127


>gi|357485047|ref|XP_003612811.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
 gi|355514146|gb|AES95769.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
          Length = 801

 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 8/98 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E L+ ECP P   +R +L  +      ++P+Q+K WFQNRR + K +
Sbjct: 92  RYHRHTARQIQEMEALFKECPHPDDKQRLKLSHDL----GLKPRQVKFWFQNRRTQMKAQ 147

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
           ++ S     N  L A N+ L  EN RLQ  +  ++  N
Sbjct: 148 QDRSD----NVILRAENESLKNENYRLQSALRNILCPN 181


>gi|326490099|dbj|BAJ94123.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE L+ ECP P   +R +L +      +++ +Q+K WFQNRR + K  
Sbjct: 97  RYHRHTPQQIQELEALFKECPHPDEKQRGELSKRL----SLDARQVKFWFQNRRTQMKTQ 152

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+  N KL   N  + E
Sbjct: 153 LERHENALLKQENEKLRTENLTIRE 177



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 34/243 (13%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI---QNGPTMPPVQHFVRAEML 288
           A L  L+ L P R+   LR+   L +G+  V + S+  +   QN  T     +  +   L
Sbjct: 425 AELQVLSPLVPIREVIFLRFCKQLAEGAWAVVDVSIDGLLSNQNSATTSAGANL-KCRRL 483

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG +++    G   +  V+H + +  SV +  RPL  S         +A L RQ   +A
Sbjct: 484 PSGCVMQDTPNGYCKVTWVEHTEYDEASVHQFYRPLLRSGLAFGASRWLATLQRQCECLA 543

Query: 348 QEVT--------QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM----GNDG 395
             ++        Q++++  GRR  ++  L++R++  F   V+  +   W+ +    G+ G
Sbjct: 544 ILMSSATASPNEQTAISQEGRR--SMLKLARRMTENFCAGVSASSAREWSKLDGATGSIG 601

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--R 453
            +DV V+   S  +            P     V+ + A+ +   + P  L  FLR+   R
Sbjct: 602 -EDVRVMARKSVSE------------PGEPPGVVLSAATSVWVPIAPEKLFDFLRDEQLR 648

Query: 454 SEW 456
           +EW
Sbjct: 649 AEW 651


>gi|357143608|ref|XP_003572981.1| PREDICTED: homeobox-leucine zipper protein HOX16-like [Brachypodium
           distachyon]
          Length = 340

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LE+ + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 80  KKRRLTPEQVHLLEKSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 135

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++  RL+A    L A +  L+++N RL+ QV  L 
Sbjct: 136 TLERDFDRLKASFDALRADHDALLQDNHRLRSQVVTLT 173


>gi|312282947|dbj|BAJ34339.1| unnamed protein product [Thellungiella halophila]
          Length = 795

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 9/86 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 134 RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 188

Query: 75  --QRKEASRLQAVNRKLTAMNKLLME 98
             +R E + L+  N KL A N  + E
Sbjct: 189 QLERHENALLRQENDKLRAENMSIRE 214



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 79/357 (22%), Positives = 143/357 (40%), Gaps = 74/357 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           +A L  L+ L P R+   LR+     +G     + S+  ++    + PV   +R   LPS
Sbjct: 428 NAELQVLSPLVPVRNVNFLRFCKQHAEGVWAAVDVSIDTVRENSGVSPV--IIR--RLPS 483

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ----- 345
           G +++    G S +  V+H + +   +  + RPL  S      +  +A L++  +     
Sbjct: 484 GCVVQDMSNGYSKVTWVEHAEYDENQIHHLYRPLIRSGLGFGSQRWVATLQRQCECLAIL 543

Query: 346 MAQEVT---QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           M+  VT    +S+   GR+  ++  L+QR++  F   ++  +   W+ +    +D DV V
Sbjct: 544 MSSSVTSPDNTSITPGGRK--SMLKLAQRMTFNFCSGISAPSVHSWSKLTVGNVDPDVRV 601

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S +                S  +L A  S+ L    P  L  FLR    R EW   
Sbjct: 602 MTRKSGED---------------SGIILSAATSVWLP-ASPQRLFDFLRNERMRCEW--- 642

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S      GP               +  + H  + ++    + L  +  +P +A  
Sbjct: 643 --DILSNG----GP---------------MQEMVHIAKGQDQGNSVSL--LRSNPMNANQ 679

Query: 520 PRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
              + L + C  +D +     A +++AP+D            +    LLPSGF I+P
Sbjct: 680 SSMLILQETC--IDASG----ALVVYAPVDIPAMNVVMNGGESSYVALLPSGFAILP 730


>gi|356561849|ref|XP_003549189.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 718

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 8/96 (8%)

Query: 7   DGKTGSLDNGK-YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           DG + S    K Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK W
Sbjct: 16  DGSSDSQRRKKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFW 71

Query: 66  FQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 98
           FQNRR + K   +R +   L+A N K+   N  + E
Sbjct: 72  FQNRRTQMKAQHERADNCALRAENDKIRCENIAIRE 107



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 138/357 (38%), Gaps = 75/357 (21%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           L  L+ L   R+F+ LRY   +E G   + + S    Q+    P      R+  LPSG  
Sbjct: 339 LQVLSPLVSTREFYFLRYCQQIEQGLWAIVDVSYDFTQDNQFAPQF----RSHRLPSGVF 394

Query: 294 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTVLAQKTTMAALRQL--RQMAQEV 350
           I+    G S +  ++H+++E  + V  + R +  S      +  +  L+++  R     V
Sbjct: 395 IQDMPNGYSKVTWIEHVEIEDKTPVHRLYRNIIYSGIAFGAQRWLTTLQRMCERIACLLV 454

Query: 351 TQSSVNGWGR---RPAALRA---LSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD--VTVL 402
           T +S    G     P   R+   L+QR+   F  +++      WT +   GM++  V V 
Sbjct: 455 TGNSTRDLGGVIPSPEGKRSMMKLAQRMVTNFCASISSSAGHRWTTLSGSGMNEVGVRVT 514

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
           V+ S D             P   N V+ + A+ +   +PP  +  F ++   R +W    
Sbjct: 515 VHKSSD-------------PGQPNGVVLSAATTIWLPIPPQTVFNFFKDEKKRPQW---- 557

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            DV S                       +  +AH          I +    +S ++    
Sbjct: 558 -DVLS-------------------NGNAVQEVAHIANGSHPGNCISVLRAFNSSQN---- 593

Query: 521 RDMFLLQLCSGMDENAVGTCAEL-IFAPIDASFADDA---------PLLPSGFRIIP 567
            +M +LQ      E+ V +   L ++ P+D    + A         PLLPSGF I P
Sbjct: 594 -NMLILQ------ESCVDSSGSLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTISP 643


>gi|186504743|ref|NP_180796.2| homeobox-leucine zipper protein HDG3 [Arabidopsis thaliana]
 gi|187471166|sp|Q9ZV65.2|HDG3_ARATH RecName: Full=Homeobox-leucine zipper protein HDG3; AltName:
           Full=HD-ZIP protein HDG3; AltName: Full=Homeodomain
           GLABRA 2-like protein 3; AltName: Full=Homeodomain
           transcription factor HDG3; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 3; AltName: Full=Protein UPCURVED
           LEAF 1
 gi|151579839|gb|ABS18315.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|330253580|gb|AEC08674.1| homeobox-leucine zipper protein HDG3 [Arabidopsis thaliana]
          Length = 725

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 8/93 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           KY R+T  Q+  +E  + ECP P   +R  L  +      ++P QIK WFQN+R + K +
Sbjct: 71  KYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQL----GLDPVQIKFWFQNKRTQNKNQ 126

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ 109
           +E  R +  N +L  +N  L  EN RL++ + Q
Sbjct: 127 QE--RFE--NSELRNLNNHLRSENQRLREAIHQ 155


>gi|3831459|gb|AAC69941.1| putative homeodomain transcription factor [Arabidopsis thaliana]
          Length = 721

 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 8/93 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           KY R+T  Q+  +E  + ECP P   +R  L  +      ++P QIK WFQN+R + K +
Sbjct: 71  KYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQL----GLDPVQIKFWFQNKRTQNKNQ 126

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ 109
           +E  R +  N +L  +N  L  EN RL++ + Q
Sbjct: 127 QE--RFE--NSELRNLNNHLRSENQRLREAIHQ 155



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 81/406 (19%), Positives = 156/406 (38%), Gaps = 85/406 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           SA    L+ L   R+ + +RY     +G   V + S+ ++     +P +   ++    PS
Sbjct: 364 SAEYQVLSPLVTTRESYFVRYCKQQGEGLWAVVDISIDHL-----LPNIN--LKCRRRPS 416

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQ- 348
           G LI+    G S +  V+H++++      +   L  +    A    +  L RQ  +++  
Sbjct: 417 GCLIQEMHSGYSKVTWVEHVEVDDAGSYSIFEKLICTGQAFAANRWVGTLVRQCERISSI 476

Query: 349 -----EVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
                +   S++   G+   ++  +++R++R F   +   T  G T+      +D+ V+ 
Sbjct: 477 LSTDFQSVDSALTNHGK--MSMLKIAERIARTFFAGMTNAT--GSTIFSGVEGEDIRVMT 532

Query: 404 NSS---PDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE--HRSEWAD 458
             S   P K  G+              ++CA  S  L   PP  +  FLRE  HR  W  
Sbjct: 533 MKSVNDPGKPPGV--------------IICAATSFWLP-APPNTVFDFLREATHRHNW-- 575

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
              DV     +                   I  + + I+      +++    GH+ +  +
Sbjct: 576 ---DVLCNGEMM----------------HKIAEITNGIDKRNCASLLRH---GHTSKSKM 613

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDA----------PLLPSGFRIIPL 568
           M     ++Q  S        T + +++AP+D +  D             +LPSGF I P 
Sbjct: 614 M-----IVQETS-----TDPTASFVLYAPVDMTSMDITLHGGGDPDFVVILPSGFAIFPD 663

Query: 569 DSGKETSSPNR---TLDLASALEIGPAGNRATNNYSTNSTCMRSVM 611
            +GK          T+     +E GP    + ++ +T    +R+ +
Sbjct: 664 GTGKPGGKEGGSLLTISFQMLVESGPEARLSVSSVATTENLIRTTV 709


>gi|18412529|ref|NP_565223.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
 gi|147744564|sp|P46607.3|HGL2_ARATH RecName: Full=Homeobox-leucine zipper protein GLABRA 2; AltName:
           Full=HD-ZIP protein ATHB-10; AltName:
           Full=Homeobox-leucine zipper protein ATHB-10
 gi|13430764|gb|AAK26004.1|AF360294_1 putative homeobox protein GLABRA2 [Arabidopsis thaliana]
 gi|1212757|emb|CAA91183.1| HD-ZIP [Arabidopsis thaliana]
 gi|20152552|emb|CAD29714.1| homeodomain-leucine zipper 10 [Arabidopsis thaliana]
 gi|25054963|gb|AAN71955.1| putative homeobox protein GLABRA2 [Arabidopsis thaliana]
 gi|332198190|gb|AEE36311.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
          Length = 747

 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 7/92 (7%)

Query: 10  TGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 69
           T      KY R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNR
Sbjct: 97  TNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNR 152

Query: 70  RCREK---QRKEASRLQAVNRKLTAMNKLLME 98
           R + K   +R E S L+A   KL   NK + E
Sbjct: 153 RTQIKAIQERHENSLLKAELEKLREENKAMRE 184



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 143/352 (40%), Gaps = 73/352 (20%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           LT + P R+ + +R    L      + + S+ ++++  T       ++   LPSG +I  
Sbjct: 379 LTPVVPTREVYFVRSCRQLSPEKWAIVDVSV-SVEDSNTEKEAS-LLKCRKLPSGCIIED 436

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEV- 350
              G S +  V+H+D+   +V  + R L  +      +  +A L     R +  MA  V 
Sbjct: 437 TSNGHSKVTWVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVP 496

Query: 351 TQSS--VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           T+ S  V     R + L+ ++QR+++ F  A+   +   WT +      D+ V   SS  
Sbjct: 497 TKDSLGVTTLAGRKSVLK-MAQRMTQSFYRAIAASSYHQWTKITTKTGQDMRV---SSRK 552

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWA--DNNIDVY 464
            L         G P  +  ++CA +S+ L  V PA+L  F R+   R EW    N   V 
Sbjct: 553 NLHD------PGEP--TGVIVCASSSLWLP-VSPALLFDFFRDEARRHEWDALSNGAHVQ 603

Query: 465 SAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMF 524
           S A +  G            G+ V +    T++  E                    + ++
Sbjct: 604 SIANLSKGQ---------DRGNSVAI---QTVKSRE--------------------KSIW 631

Query: 525 LLQLCSGMDENAVGTCAELIFAPIDAS-----FADDAP----LLPSGFRIIP 567
           +LQ  S     +V     +++AP+D +      A   P    +LPSGF IIP
Sbjct: 632 VLQDSSTNSYESV-----VVYAPVDINTTQLVLAGHDPSNIQILPSGFSIIP 678


>gi|449439589|ref|XP_004137568.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
 gi|449517265|ref|XP_004165666.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
          Length = 705

 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 16/112 (14%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+   Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K +
Sbjct: 23  RYHRHNANQIQRLEAMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 78

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV--------YENGYFRQH 120
            E    +A N  L A N  +  EN  +++ +  ++         ++ YF +H
Sbjct: 79  HE----RADNSALRAENDKIRCENIAIREALKNVICPSCGGPPLQDPYFDEH 126



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 145/370 (39%), Gaps = 82/370 (22%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           L  L+ L P R F+ +RY   +E G   V + S     N P    +    +    PSG L
Sbjct: 334 LQLLSPLVPTRHFYFIRYCQQIEQGVWAVVDVSY----NIPRENQIVSHPQCHRFPSGCL 389

Query: 294 IRPCEGGGSIIHIVDHMDLEP-WSVPEVLRPLYESSTVLAQKTTMAALRQL--RQMAQEV 350
           I+    G S +  ++H+++E   S   + R L  S      +  +A L+++  R     V
Sbjct: 390 IQDMPNGYSKVTWIEHVEVEDRGSTHWLFRDLIHSGLAFGAERWLATLQRMSERFACLMV 449

Query: 351 TQSSVNGWGRRPAALRA------LSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
           T SS    G    +L        L+QR+   F  +++      WT +   GM++V V V 
Sbjct: 450 TSSSNQDLGGVIPSLEGKRSMMKLAQRMVNNFCASISTSHGHRWTTLS--GMNEVGVRVT 507

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW---ADN 459
                   ++ S  +G P   N V+ + A+ +   V P  +  F +    RS+W   ++ 
Sbjct: 508 --------VHKSTDSGQP---NGVVLSAATTIWLPVSPQTIFNFFKNDRTRSQWDVLSEG 556

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
           N  V   A I  G  S PG+ +                         L G   S      
Sbjct: 557 N-PVQEVAHISNG--SHPGNCISV-----------------------LRGFNTSQN---- 586

Query: 520 PRDMFLLQLCSGMDENAVGTCAEL-IFAPIDASFADDA---------PLLPSGFRIIP-- 567
             +M +LQ      E+ + +   L ++ P+D    + A         PLLPSGF I+P  
Sbjct: 587 --NMLILQ------ESCIDSSGSLVVYCPVDLPAMNVAMSGEDPSSIPLLPSGFTILPDG 638

Query: 568 -LDSGKETSS 576
             D G+  SS
Sbjct: 639 RRDQGEGASS 648


>gi|356535894|ref|XP_003536477.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 751

 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K  
Sbjct: 56  RYHRHTPHQIQELEAFFKECPHPDEKQRLDLSKRLA----LENKQVKFWFQNRRTQMKTQ 111

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E   L+  N KL A N L+ +
Sbjct: 112 LERHENIMLRQENDKLRAENSLMKD 136



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 142/352 (40%), Gaps = 71/352 (20%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           L+ L P R    +R+     +G   V + S++   +     PV    R   LPSG +++ 
Sbjct: 381 LSPLVPVRQVRFIRFCKQHAEGVWAVVDVSIEIGHDAANAQPVMSCRR---LPSGCIVQD 437

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQS-- 353
              G S +  ++H + +   V ++ RPL  S         +A L RQ   +A  ++ S  
Sbjct: 438 MPNGYSKVTWLEHWEYDENVVHQLYRPLLSSGVGFGAHRWIATLQRQCECLAILMSSSIS 497

Query: 354 -----SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM--GNDGMDDVTVLVNSS 406
                +++  GRR  ++  L+QR++  F   V   +   W  +  G  G DD+ V+   +
Sbjct: 498 SDDHTALSQAGRR--SMLKLAQRMTSNFCSGVCASSARKWDSLHIGTLG-DDMKVMTRKN 554

Query: 407 PDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVY 464
            D             P     ++ + A+ +   V    L  FLR+   RSEW     D+ 
Sbjct: 555 VDD------------PGEPPGIVLSAATSVWVPVSRQRLFDFLRDERLRSEW-----DIL 597

Query: 465 SAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMF 524
           S      GP             Q ++ +A    H   + +++   V  +         M 
Sbjct: 598 SNG----GPM------------QEMVHIAKGQGHGNCVSLLRANAVNANDS------SML 635

Query: 525 LLQLCSGMDENAVGTCAELIFAPIDA-------SFADDA--PLLPSGFRIIP 567
           +LQ  + MD     +C+ +++AP+D        S  D A   LLPSGF I+P
Sbjct: 636 ILQE-TWMD----ASCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILP 682


>gi|30678721|ref|NP_567183.2| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
 gi|122223902|sp|Q0WV12.1|ANL2_ARATH RecName: Full=Homeobox-leucine zipper protein ANTHOCYANINLESS 2;
           AltName: Full=HD-ZIP protein ANL2; AltName:
           Full=Homeodomain protein AHDP; AltName: Full=Homeodomain
           transcription factor ANL2
 gi|110742219|dbj|BAE99036.1| homeodomain protein AHDP [Arabidopsis thaliana]
 gi|332656526|gb|AEE81926.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
          Length = 802

 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 9/86 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 137 RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191

Query: 75  --QRKEASRLQAVNRKLTAMNKLLME 98
             +R E + L+  N KL A N  + E
Sbjct: 192 QLERHENALLRQENDKLRAENMSIRE 217



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 30/237 (12%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           +A L  L+ L P R+   LR+     +G   V + S+  ++      PV        LPS
Sbjct: 433 NAELQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSGGAPV-----IRRLPS 487

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
           G +++    G S +  V+H + +   + ++ RPL  S      +  +A L RQ   +A  
Sbjct: 488 GCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAIL 547

Query: 350 VTQS-------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           ++ S       S+   GR+  ++  L+QR++  F   ++  +   W+ +    +D DV V
Sbjct: 548 ISSSVTSHDNTSITPGGRK--SMLKLAQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVRV 605

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
           +   S D             P     ++ + A+ +     P  L  FLR    R EW
Sbjct: 606 MTRKSVDD------------PGEPPGIVLSAATSVWLPAAPQRLYDFLRNERMRCEW 650


>gi|12324584|gb|AAG52245.1|AC011717_13 homeobox protein (GLABRA2); 66648-63167 [Arabidopsis thaliana]
 gi|1695244|gb|AAC80260.1| homeodomain protein [Arabidopsis thaliana]
          Length = 745

 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 7/92 (7%)

Query: 10  TGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 69
           T      KY R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNR
Sbjct: 95  TNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNR 150

Query: 70  RCREK---QRKEASRLQAVNRKLTAMNKLLME 98
           R + K   +R E S L+A   KL   NK + E
Sbjct: 151 RTQIKAIQERHENSLLKAELEKLREENKAMRE 182



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 143/352 (40%), Gaps = 73/352 (20%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           LT + P R+ + +R    L      + + S+ ++++  T       ++   LPSG +I  
Sbjct: 377 LTPVVPTREVYFVRSCRQLSPEKWAIVDVSV-SVEDSNTEKEAS-LLKCRKLPSGCIIED 434

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEV- 350
              G S +  V+H+D+   +V  + R L  +      +  +A L     R +  MA  V 
Sbjct: 435 TSNGHSKVTWVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVP 494

Query: 351 TQSS--VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           T+ S  V     R + L+ ++QR+++ F  A+   +   WT +      D+ V   SS  
Sbjct: 495 TKDSLGVTTLAGRKSVLK-MAQRMTQSFYRAIAASSYHQWTKITTKTGQDMRV---SSRK 550

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWA--DNNIDVY 464
            L         G P  +  ++CA +S+ L  V PA+L  F R+   R EW    N   V 
Sbjct: 551 NLHD------PGEP--TGVIVCASSSLWLP-VSPALLFDFFRDEARRHEWDALSNGAHVQ 601

Query: 465 SAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMF 524
           S A +  G            G+ V +    T++  E                    + ++
Sbjct: 602 SIANLSKGQ---------DRGNSVAI---QTVKSRE--------------------KSIW 629

Query: 525 LLQLCSGMDENAVGTCAELIFAPIDAS-----FADDAP----LLPSGFRIIP 567
           +LQ  S     +V     +++AP+D +      A   P    +LPSGF IIP
Sbjct: 630 VLQDSSTNSYESV-----VVYAPVDINTTQLVLAGHDPSNIQILPSGFSIIP 676


>gi|255574032|ref|XP_002527933.1| homeobox protein, putative [Ricinus communis]
 gi|223532666|gb|EEF34449.1| homeobox protein, putative [Ricinus communis]
          Length = 713

 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 17/113 (15%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  QV+ LE ++ ECP P   +R QL RE      +  +QIK WFQNRR + K +
Sbjct: 35  RYHRHTANQVQKLESMFKECPHPDEKQRLQLSREL----GLTQRQIKFWFQNRRTQMKAQ 90

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL---------VYENGYFRQH 120
            E    +A N  L A N  +  EN  +++ +  +         V E+ YF +H
Sbjct: 91  HE----RADNCALRAENDKIRCENIAIREALKNVICPSCGGPPVTEDSYFDEH 139



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 141/358 (39%), Gaps = 84/358 (23%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHF---VRAEMLPS 290
           L  L+ L P R+F++LRY   +E G   +   S            +Q F    R+  LPS
Sbjct: 344 LQVLSPLVPTREFYILRYCQQIEQGLWAIVNVSYD----------IQQFSSQCRSHRLPS 393

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTVLAQKTTMAALRQLRQ---- 345
           G LI+    G S +  V+H+++E  +    + R L  S      +  +A L+++ +    
Sbjct: 394 GCLIQDMPNGYSKVTWVEHVEVEDKNPTHRLYRDLIHSGMAFGAERWLATLQRMCERFAC 453

Query: 346 -MAQEVTQSSVNGWGRRPAALRA---LSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
            M        + G    P   R+   L+QR++  F  +++      WT +   G ++V V
Sbjct: 454 LMVSGNLTRDLGGVIPSPDGKRSMMKLAQRMANSFCSSISTSNSHRWTAIS--GSNEVGV 511

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS--EWADN 459
            V+ S D             P   N V+   A+     V P  +  F ++ R+  +W   
Sbjct: 512 RVHKSTD-------------PGQPNGVVLNAATTFWLPVSPQNVFNFFKDERTRAQW--- 555

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             DV S+           G+ V     Q +  +A+       + V++    G +      
Sbjct: 556 --DVLSS-----------GNAV-----QEVAHIANGSHPGNCISVLRAFNSGQN------ 591

Query: 520 PRDMFLLQLCSGMDENAVGTCAEL-IFAPIDASFADDA---------PLLPSGFRIIP 567
             +M +LQ      E+ + +   L ++ P+D    + A         PLLPSGF I P
Sbjct: 592 --NMLILQ------ESCIDSSGSLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTICP 641


>gi|5702094|gb|AAD47139.1|AF077335_1 Anthocyaninless2 [Arabidopsis thaliana]
          Length = 801

 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 9/86 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 137 RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191

Query: 75  --QRKEASRLQAVNRKLTAMNKLLME 98
             +R E + L+  N KL A N  + E
Sbjct: 192 QLERHENALLRQENDKLRAENMSIRE 217



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 30/237 (12%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           +A L  L+ L P R+   LR+     +G   V + S+  ++      PV        LPS
Sbjct: 432 NAELQVLSPLVPVRNVNFLRFCKQHAEGVWPVVDVSIDPVRENSGGAPV-----IRRLPS 486

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ----- 345
           G +++    G S +  V+H + +   + ++ RPL  S      +  +A L++  +     
Sbjct: 487 GCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAIL 546

Query: 346 MAQEVT---QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           M+  VT    +S+   GR+  ++  L+QR++  F   ++  +   W+ +    +D DV V
Sbjct: 547 MSSSVTSHDNTSITPGGRK--SMLKLAQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVRV 604

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
           +   S D             P     ++ + A+ +     P  L  FLR    R EW
Sbjct: 605 MTRKSVDD------------PGEPPGIVLSAATSVWLPAAPQRLYDFLRNERMRCEW 649


>gi|345195182|tpg|DAA34956.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413917511|gb|AFW57443.1| putative homeobox/lipid-binding domain family protein isoform 1
           [Zea mays]
 gi|413917512|gb|AFW57444.1| putative homeobox/lipid-binding domain family protein isoform 2
           [Zea mays]
          Length = 769

 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR---E 73
           +Y R+T  Q++ LE  + E P P   +R++L RE      +EP Q+K WFQN+R +   +
Sbjct: 82  RYHRHTQHQIQELEAFFKEYPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 137

Query: 74  KQRKEASRLQAVNRKLTAMN 93
           ++R E  +L+A N KL A N
Sbjct: 138 QERHENMQLRAENEKLRAEN 157



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 129/358 (36%), Gaps = 82/358 (22%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGY--LIRPC 297
           L P R+   LRY     DGS  V + S++    G  +       R          LI+  
Sbjct: 396 LVPTRECQFLRYCKQHTDGSWAVVDVSVE----GQLLRTGSRQGRGRGRRRPSGCLIQEM 451

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSS-- 354
             G S +  V+H + +   V ++ RPL  S      +   + L RQ  ++A  +      
Sbjct: 452 PNGYSRVTWVEHAEADDMMVHDLYRPLVCSGLAFGARRWASTLERQCERLASAMASGVVV 511

Query: 355 ------------VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
                        +  GRR  ++  L++R+   F   V   T   WT +   G +DV V+
Sbjct: 512 PAAAAGPAAGVVTSPEGRR--SMMRLAERMVASFCGGVTASTTHQWTTLSGSGAEDVRVM 569

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWA--D 458
              S D             P     ++   A+     V PA +  FLR+   RSEW    
Sbjct: 570 TRKSVDD------------PGRPPGIILNAATSFWLPVAPARVFGFLRDDATRSEWDMLS 617

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAI 518
           N  DV   A I  G                        +H   + +++++    +  +  
Sbjct: 618 NGGDVQEMAHIANGR-----------------------DHGNAVSLLRVDNANSNQGN-- 652

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
               M +LQ C     +A G+   +I+AP+D             D   LLPSGF I+P
Sbjct: 653 ----MLILQECC---TDATGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 701


>gi|414883573|tpg|DAA59587.1| TPA: putative receptor-like kinase family protein, partial [Zea
           mays]
          Length = 52

 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/40 (80%), Positives = 35/40 (87%), Gaps = 2/40 (5%)

Query: 148 HPP-RDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPG 185
           HPP RDA+ PAGLL+IAEETL EF+SKATGTAV WVQM G
Sbjct: 13  HPPQRDANNPAGLLAIAEETLAEFMSKATGTAVNWVQMVG 52


>gi|357444035|ref|XP_003592295.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355481343|gb|AES62546.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 842

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K  
Sbjct: 59  RYHRHTPNQIQELESFFKECPHPDEKQRLDLSKRL----GLENKQVKFWFQNRRTQMKTQ 114

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E   L+  N KL   N ++ E
Sbjct: 115 LERHENIMLRQENDKLRGENSMMKE 139



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 103/443 (23%), Positives = 175/443 (39%), Gaps = 104/443 (23%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           L+ L P R   +LR+     +G   V + S++ I + P+    Q F+    LPSG +++ 
Sbjct: 382 LSPLVPVRQVRILRFCKQHAEGVWAVVDVSVE-IGHDPS--NAQPFISCRRLPSGCIVQD 438

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSV 355
              G S +  ++H + +   V ++ RPL  S         +A L RQ   +A  ++ S  
Sbjct: 439 MPNGYSKVTWIEHWEYDESIVHQLYRPLLISGFGFGAHRWIATLQRQCEGLAILMSSSIS 498

Query: 356 NG-------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM-DDVTVLVNSSP 407
           N         GRR  ++  L+QR++  F   V   +   W  +    + DD+ V+   + 
Sbjct: 499 NDDHTALSQAGRR--SMLKLAQRMTNNFCSGVCASSARKWDSLQMGTLSDDMRVMTRKNV 556

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYS 465
           D             P     ++ + A+ +   V    L  FLR+   RSEW     D+ S
Sbjct: 557 DD------------PGEPPGIVLSAATSVWMPVSRQRLFDFLRDERLRSEW-----DILS 599

Query: 466 AAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE----DAIMPR 521
                 GP                         +E + + K +G G+       +A+   
Sbjct: 600 NG----GPM------------------------QEMVHIAKGQGQGNCVSLLRANAVNAN 631

Query: 522 D--MFLLQLCSGMDENAVGTCAELIFAPIDA-------SFADDA--PLLPSGFRIIPLDS 570
           D  M +LQ  + MD     +C+ +++AP+D        S  D A   LLPSGF I+P   
Sbjct: 632 DSSMLILQE-TWMDT----SCSVVVYAPVDGQSLNVVMSGGDSAYVALLPSGFAIVP--D 684

Query: 571 GKETSS---PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHV 627
           G + S     N TL    A + G                  S++T+ F+    S     +
Sbjct: 685 GNDPSGYGMSNGTLQKGGASDGGG-----------------SLLTVGFQILVNSLPTAKL 727

Query: 628 ATMARQYVRSIIS-SVQRVALAL 649
              +   V ++IS ++Q++  AL
Sbjct: 728 TMESVDTVNNLISCTIQKIKAAL 750


>gi|356529444|ref|XP_003533302.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 896

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 201 RYHRHTANQIQRLESMFKECPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 256

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R +   L+A N K+   N  + E
Sbjct: 257 HERADNCALRAENDKIRCENIAIRE 281



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 32/255 (12%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           L  L+ L   R+F+ LRY   +E G   + + S    Q+    P      R+  LPSG  
Sbjct: 513 LQVLSPLVSTREFYFLRYCQQIEQGLWAIVDVSYDFPQDNQFAPQY----RSHRLPSGVF 568

Query: 294 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTVLAQKTTMAALRQL--RQMAQEV 350
           I+    G S +  ++H+++E  + V  + R L  S      +  +  L+++  R     V
Sbjct: 569 IQDMPNGYSKVTWIEHVEIEDKTPVHRLYRNLIYSGIAFGAQRWLTTLQRMCERIACLMV 628

Query: 351 TQSSVNGWGR---RPAALRA---LSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD--VTVL 402
           T +S    G     P   R+   L+QR+   F  +++      WT +   GM++  V V 
Sbjct: 629 TGNSTRDLGGVIPSPEGKRSMMKLAQRMVTNFCASISASAGHRWTTLSGSGMNEIGVRVT 688

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWA--D 458
           V+ S D             P   N V+ + A+ +   +PP  +  F ++   R +W    
Sbjct: 689 VHKSSD-------------PGQPNGVVLSAATTIWLPIPPQTVFNFFKDEKKRPQWDVLS 735

Query: 459 NNIDVYSAAAIKVGP 473
           N   V   A I  GP
Sbjct: 736 NGNAVQEVAHIANGP 750


>gi|326502292|dbj|BAJ95209.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326505580|dbj|BAJ95461.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 336

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 72  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 127

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++  RL+A    L A +  L+++N RL+ QV  L 
Sbjct: 128 TLERDFDRLKASFDALRADHDALLQDNHRLRSQVVTLT 165


>gi|60099373|dbj|BAD89977.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 633

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 7/92 (7%)

Query: 10  TGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 69
           T      KY R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNR
Sbjct: 95  TNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNR 150

Query: 70  RCREK---QRKEASRLQAVNRKLTAMNKLLME 98
           R + K   +R E S L+A   KL   NK + E
Sbjct: 151 RTQIKAIQERHENSLLKAELEKLREENKAMRE 182



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 25/230 (10%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           LT + P R+ + +R    L      + + S+ ++++  T       ++   LPSG +I  
Sbjct: 377 LTPVVPTREVYFVRSCRQLSPEKWAIVDVSV-SVEDSNTEKEAS-LLKCRKLPSGCIIED 434

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEV- 350
              G S +  V+H+D+   +V  + R L  +      +  +A L     R +  MA  V 
Sbjct: 435 TSNGHSKVTWVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVP 494

Query: 351 TQSS--VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           T+ S  V     R + L+ ++QR+++ F  A+   +   WT +      D+ V   SS  
Sbjct: 495 TKDSLGVTTLAGRKSVLK-MAQRMTQSFYRAIAASSYHQWTKITTKTGQDMRV---SSRK 550

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
            L         G P  +  ++CA +S+ L  V PA+L  F R+   R EW
Sbjct: 551 NLHD------PGEP--TGVIVCASSSLWLP-VSPALLFDFFRDEARRHEW 591


>gi|226509342|ref|NP_001145713.1| uncharacterized protein LOC100279217 [Zea mays]
 gi|219884129|gb|ACL52439.1| unknown [Zea mays]
          Length = 672

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 132/349 (37%), Gaps = 77/349 (22%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P RD + +RY     DG+  V + SL               ++    PSG LI+    
Sbjct: 309 LVPTRDSYFVRYCKQNADGTWAVVDVSLDT----------SSVLKCRRRPSGCLIQEMPN 358

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----MAQEVTQSS 354
           G S +  V+H++++  SV  + + L +S      +  +  L RQ  +    MA  +  S 
Sbjct: 359 GYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERLASVMASNIPTSD 418

Query: 355 V----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
           +    +  GR+  ++  L++R+   F   V       WT +   G DDV V+   S D  
Sbjct: 419 IGVITSTEGRK--SMLKLAERMVTSFCGGVTASAAHQWTTLSGSGADDVRVMTRKSVDD- 475

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     ++   A+     + P  +  FLR+   RSEW     D+ S   
Sbjct: 476 -----------PGRPPGIVLNAATSFWLPITPKRVFDFLRDESSRSEW-----DILSNGG 519

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQ- 527
                              V+  +AH     +    + L  V  S        +M +LQ 
Sbjct: 520 -------------------VVQEMAHIANGRDHGNCVSLLRVNQSTNST--QSNMLILQE 558

Query: 528 LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
            C+    +A G+   +I+AP+D             D   LLPSGF I+P
Sbjct: 559 SCT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP 601



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 29 LERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAV 85
          +E  + ECP P   +R++L RE  ++    P Q+K WFQN+R + K   +R+E S+L+A 
Sbjct: 1  MEAFFKECPHPDDKQRKELSRELGLV----PLQVKFWFQNKRTQMKNQHERQENSQLRAE 56

Query: 86 NRKLTAMN 93
          N KL A N
Sbjct: 57 NEKLRAEN 64


>gi|242076842|ref|XP_002448357.1| hypothetical protein SORBIDRAFT_06g025750 [Sorghum bicolor]
 gi|241939540|gb|EES12685.1| hypothetical protein SORBIDRAFT_06g025750 [Sorghum bicolor]
          Length = 817

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP Q+  LE ++ E P P   +R +L ++      +EP+Q+K WFQNRR   K  
Sbjct: 105 RYNRHTPHQIARLEAMFKEFPHPDEKQRAELSKQL----GLEPRQVKFWFQNRRTNAKCL 160

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ 119
              S L          N++  +EN RL+++  +L  EN   R+
Sbjct: 161 TWLSLLHGPE---PGKNQMERQENARLKQENDKLRVENLSIRE 200



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 143/358 (39%), Gaps = 71/358 (19%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+   L + +  V + S+  +Q    +       +   LPSG
Sbjct: 447 AELQVLSPLVPIREVTFLRFCKQLAESAWAVVDVSIDGLQMDHCL---ATNTKCRRLPSG 503

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA--- 347
            +++    G  +   V+H +    SV ++ +PL  S   L     +A L RQ   +A   
Sbjct: 504 CVLQDTPNGCKVTW-VEHAEYPEASVHQLYQPLLCSGLALGAGRWLATLQRQCECLAILM 562

Query: 348 -----QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM-----D 397
                 E    +V+  G+R  +L  L++R+   F   ++  +   W+++  DG+      
Sbjct: 563 SSLAVPEHDSEAVSLEGKR--SLLKLARRMMENFCAGMSASSSCEWSIL--DGLTGSMGK 618

Query: 398 DVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR--EHRSE 455
           DV V+V +S D+            P V   V+ + A+ +   V P  L  FLR  E R+E
Sbjct: 619 DVRVMVQNSVDE------------PGVPPGVVLSVATAVWLPVTPERLFNFLRDEELRAE 666

Query: 456 WADNNIDVYSAAA-----IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGV 510
           W     D+ S        +++    L G+ V       +L   HT  H   + +++    
Sbjct: 667 W-----DILSNGGPMQQMLRITKGQLDGNSV------TLLRADHTNSHLNSILILQETCT 715

Query: 511 GHSPEDAIM-PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIP 567
             S    +  P D   +QL  G  ++                   +  LLPSGF I+P
Sbjct: 716 DRSGAMVVYAPVDFPAMQLVIGGGDST------------------NVALLPSGFVILP 755


>gi|186511404|ref|NP_001118907.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
 gi|332656527|gb|AEE81927.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
          Length = 570

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 9/86 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 137 RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191

Query: 75  --QRKEASRLQAVNRKLTAMNKLLME 98
             +R E + L+  N KL A N  + E
Sbjct: 192 QLERHENALLRQENDKLRAENMSIRE 217



 Score = 39.7 bits (91), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 5/112 (4%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           +A L  L+ L P R+   LR+     +G   V + S+  ++      PV        LPS
Sbjct: 433 NAELQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSGGAPV-----IRRLPS 487

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ 342
           G +++    G S +  V+H + +   + ++ RPL  S      +  +A L++
Sbjct: 488 GCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQR 539


>gi|334184032|ref|NP_001185443.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
 gi|332198191|gb|AEE36312.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
          Length = 776

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 7/92 (7%)

Query: 10  TGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 69
           T      KY R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNR
Sbjct: 126 TNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNR 181

Query: 70  RCREK---QRKEASRLQAVNRKLTAMNKLLME 98
           R + K   +R E S L+A   KL   NK + E
Sbjct: 182 RTQIKAIQERHENSLLKAELEKLREENKAMRE 213



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 143/352 (40%), Gaps = 73/352 (20%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           LT + P R+ + +R    L      + + S+ ++++  T       ++   LPSG +I  
Sbjct: 408 LTPVVPTREVYFVRSCRQLSPEKWAIVDVSV-SVEDSNTEKEAS-LLKCRKLPSGCIIED 465

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEV- 350
              G S +  V+H+D+   +V  + R L  +      +  +A L     R +  MA  V 
Sbjct: 466 TSNGHSKVTWVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVP 525

Query: 351 TQSS--VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           T+ S  V     R + L+ ++QR+++ F  A+   +   WT +      D+ V   SS  
Sbjct: 526 TKDSLGVTTLAGRKSVLK-MAQRMTQSFYRAIAASSYHQWTKITTKTGQDMRV---SSRK 581

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWA--DNNIDVY 464
            L         G P  +  ++CA +S+ L  V PA+L  F R+   R EW    N   V 
Sbjct: 582 NLHD------PGEP--TGVIVCASSSLWLP-VSPALLFDFFRDEARRHEWDALSNGAHVQ 632

Query: 465 SAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMF 524
           S A +  G            G+ V +    T++  E                    + ++
Sbjct: 633 SIANLSKGQ---------DRGNSVAI---QTVKSRE--------------------KSIW 660

Query: 525 LLQLCSGMDENAVGTCAELIFAPIDAS-----FADDAP----LLPSGFRIIP 567
           +LQ  S     +V     +++AP+D +      A   P    +LPSGF IIP
Sbjct: 661 VLQDSSTNSYESV-----VVYAPVDINTTQLVLAGHDPSNIQILPSGFSIIP 707


>gi|357147780|ref|XP_003574482.1| PREDICTED: homeobox-leucine zipper protein HOX5-like [Brachypodium
           distachyon]
          Length = 276

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 76  KKRRLTAEQVQMLERSFGEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKNK 131

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++  RL+A    L A +  L+ +NDRL+ QV  L 
Sbjct: 132 QLEQDFDRLKAAYDALAADHHGLLSDNDRLRAQVISLT 169


>gi|356532433|ref|XP_003534777.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 675

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 11/102 (10%)

Query: 4   SCKDGKTGSLDNGK----YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           S  D    SL+ GK    Y R+  +Q   LE L+ +CP P  I R+Q+ ++      +EP
Sbjct: 11  SGDDQHNQSLNKGKKTTTYRRHKEDQRTRLEELFRKCPNPDEIERRQIAKDL----GLEP 66

Query: 60  KQIKVWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 98
           KQ+K WFQN+R ++K   +R + + L+  N ++   N +L E
Sbjct: 67  KQVKFWFQNKRTQKKTISERVDNNVLRVENERMHNENLVLRE 108


>gi|115480263|ref|NP_001063725.1| Os09g0526300 [Oryza sativa Japonica Group]
 gi|113631958|dbj|BAF25639.1| Os09g0526300, partial [Oryza sativa Japonica Group]
          Length = 131

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 8/86 (9%)

Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 75
          +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+E +Q+K WFQNRR + KQ 
Sbjct: 4  RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKQT 59

Query: 76 ---RKEASRLQAVNRKLTAMNKLLME 98
             R E + L+  N KL A N  + E
Sbjct: 60 QIERHENALLRQENDKLRAENMTIRE 85


>gi|356561699|ref|XP_003549117.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 827

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+TP+Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K   
Sbjct: 144 YHRHTPQQIQELEAFFKECPHPDEKQRTDLSKRL----GLENKQVKFWFQNRRTQMKTQL 199

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E   L+  N KL A N ++ +
Sbjct: 200 ERHENMILRQENDKLRAENSVMKD 223



 Score = 40.4 bits (93), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 29/230 (12%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           L+ L PAR    LR+     +G   V + S+   +N     P+    R   LPSG +I+ 
Sbjct: 471 LSPLVPARQVSFLRFCKKHAEGLWAVVDVSVDIGRNVTNSHPLMSCRR---LPSGCVIQD 527

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVN 356
              G S I  V+H   +   + ++ RPL  S      +  +A L  LRQ        S  
Sbjct: 528 MPNGFSNITWVEHSQYDESVIHQLYRPLVSSGIGFGAQRWIATL--LRQCDCLAILRSPQ 585

Query: 357 GWGRRPAA------LRALSQRLSRGFNEAVNGFTDEGWTVM--GNDGMDDVTVLVNSSPD 408
           G    P A      +  L+QR++  F   +   +   W ++  GN   DD+ ++     D
Sbjct: 586 GPSEDPTAQAGRTNMMKLAQRMTECFCSGICASSACKWDILHIGNLA-DDMRIMARKIDD 644

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
                        P  +  ++ + ++ +   V    +  FLR+   R EW
Sbjct: 645 -------------PTEAPGIVLSASTSVWMPVSRKRVFDFLRDENLRGEW 681


>gi|356529261|ref|XP_003533214.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 771

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+TP+Q++ LE  + ECP P   +R  L +       +E KQ+K WFQNRR + K   
Sbjct: 80  YHRHTPQQIQELEAFFKECPHPDEKQRTDLSKRL----GLENKQVKFWFQNRRTQMKTQL 135

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E   L+  N KL A N ++ +
Sbjct: 136 ERHENMILRQENDKLRAENSVMKD 159



 Score = 42.7 bits (99), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 26/230 (11%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           L+ L PAR    LRY+    +G   V + S+   +N     P+    R   LPSG +I+ 
Sbjct: 406 LSPLVPARSLSFLRYSKQHGEGVWAVVDVSVDIGRNVTNSHPLMSCRR---LPSGCVIQD 462

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL-AQKTTMAALRQLRQMAQEVTQ--- 352
              G S I  V+H   +   V ++ RPL  S     AQ+     LRQ   +A  ++Q   
Sbjct: 463 MPNGFSKITWVEHSQYDESVVHQLYRPLVSSGIGFGAQRWIATLLRQCDCLAILMSQIPS 522

Query: 353 ---SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM-DDVTVLVNSSPD 408
              + ++  G++   +  L+QR++  F   +   +   W ++    + DD+ ++      
Sbjct: 523 EDPTVISLEGKK--NMLKLAQRMTEYFCSGICASSVRKWEILNIGNLADDMRIMARK--- 577

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
               +N+      P +   VL A  S+ +  V    +  FLR+   R EW
Sbjct: 578 ----INMDDPTEAPGI---VLSASTSVWMP-VSRQRVFDFLRDENLRGEW 619


>gi|345193171|tpg|DAA34951.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 787

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 7/79 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+TP Q+E LE ++ E   P   +R QL R+      ++P+Q+K WFQNRR   K   
Sbjct: 140 YNRHTPRQIEQLEAMFKEFHHPDEKQRAQLSRQL----GLDPRQVKFWFQNRRTHLKNQL 195

Query: 75  QRKEASRLQAVNRKLTAMN 93
           +R+E +RL+  N KL   N
Sbjct: 196 ERQENARLKHENDKLRVEN 214



 Score = 42.7 bits (99), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 104/467 (22%), Positives = 180/467 (38%), Gaps = 113/467 (24%)

Query: 206 AARACGLVGLEPTR-VAEILKDRPRGSAILYALTTLAPARDFWLLRYTSVLEDGSLVVCE 264
           A+R  G+V ++ +  + E+  D  R S I Y +   A           S++E+    +  
Sbjct: 406 ASRESGIVTIDSSAALMEVFMDERRWSDIFYCIVAKA-----------SIVEE----ILP 450

Query: 265 RSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPL 324
            S+  +Q    +       +   LPSG +++    G  +   V+H +    SV ++ +PL
Sbjct: 451 GSIDGLQTDQCL---ATNTKCRRLPSGCVLQDTPNGCKVTW-VEHAEYPEASVHQLYQPL 506

Query: 325 YESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNGWGRRPAA--------LRALSQRLSRG 375
             S   L     +A L RQ   +A  +  SS+       AA        L  L++R+   
Sbjct: 507 MRSGLALGAGRWLATLQRQCECLA--ILMSSLAAPEHDSAAVSLEGKWSLLKLARRMMEN 564

Query: 376 FNEAVNGFTDEGWTVM----GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCA 431
           F   +   +   W+++    G+ G  DV V+V +S D+            P V   V+ +
Sbjct: 565 FCAGMGASSSREWSMLDGFTGSTG-KDVRVMVQNSVDE------------PGVPPGVVLS 611

Query: 432 KASMLLQNVPPAILLRFLR--EHRSEWADNNIDVYSAAA-----IKVGPCSLPGSRVGTF 484
            A+ +   V P  L  FLR  E R+EW     D+ S        +++    L G+ V   
Sbjct: 612 VATAVWLPVTPERLFNFLRDEELRAEW-----DILSNGGPMQQVLRISKGQLDGNSVA-- 664

Query: 485 GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM-PRDMFLLQLCSGMDENAVGTCAEL 543
               +L   HT  H   + +++      S    +  P D   +QL  G  +         
Sbjct: 665 ----LLRADHTDSHLNSILILQETCTDRSGAMVVYTPVDFPAMQLVLGGGD--------- 711

Query: 544 IFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTN 603
                    + +  LLPSGF I+P  S             AS L     G++A       
Sbjct: 712 ---------SKNVALLPSGFVILPAGS------------TASGL-----GHKARG----- 740

Query: 604 STCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIIS-SVQRVALAL 649
                S++T+AF+    S     +   +   V S+IS +++++  AL
Sbjct: 741 -----SLLTVAFQILVNSQPTAKLTVESVDTVYSLISCTIEKIKAAL 782


>gi|1814424|gb|AAB41901.1| homeodomain protein AHDP [Arabidopsis thaliana]
          Length = 745

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 9/86 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 97  RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 151

Query: 75  --QRKEASRLQAVNRKLTAMNKLLME 98
             +R E + L+  N KL A N  + E
Sbjct: 152 QLERHENALLRQENDKLRAENMSIRE 177



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 30/237 (12%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           +A L  L+ L P R+   LR+     +G   V + S+  ++      PV        LPS
Sbjct: 393 NAELQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSGGAPV-----IRRLPS 447

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
           G +++    G S +  V+H + +   + ++ RPL  S      +  +A L RQ   +A  
Sbjct: 448 GCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAIL 507

Query: 350 VTQS-------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           ++ S       S+   GR+  ++  L+QR++  F   ++  +   W+ +    +D DV V
Sbjct: 508 ISSSVTSHDNTSITLGGRK--SMLKLAQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVRV 565

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
           +   S D             P     ++ + A+ +     P  L  FLR    R EW
Sbjct: 566 MTRKSVDD------------PGEPPGIVLSAATSVWLPAAPQRLYDFLRNERMRCEW 610


>gi|302773265|ref|XP_002970050.1| hypothetical protein SELMODRAFT_450564 [Selaginella moellendorffii]
 gi|300162561|gb|EFJ29174.1| hypothetical protein SELMODRAFT_450564 [Selaginella moellendorffii]
          Length = 683

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 8/85 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T +Q   LE ++ ECP P   +RQ+L RE      +EP+Q+K WFQNRR + K  
Sbjct: 21  RYHRHTVQQTRQLE-MFKECPHPDEKQRQELGREL----GLEPRQVKFWFQNRRTQMKAH 75

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R + S L+A N  L   N  L E
Sbjct: 76  HERADNSILRAENENLRTENIALRE 100



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 34/239 (14%)

Query: 233 ILYA----LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEML 288
           +LYA    L+ L P R+F+ LRY     +    + + S+  +++ P        +R  M 
Sbjct: 309 LLYAELQILSPLVPTREFFFLRYCKQHSERVWAIVDVSIDGLRDNPAPQ-----LRCRMR 363

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG+ I   + G S +  V H++ +      +   L  S      K  +A L RQ  ++ 
Sbjct: 364 PSGFFIEDLQNGYSKVTAVQHIEADHRQTENIYHGLVCSGAAFGAKRWLAILQRQCERLG 423

Query: 348 QEVTQSSV--------NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
             +T +          N  GRR  ++  L+QR++  +   V+      WT +   G +D+
Sbjct: 424 IMLTNNISARDLGVIPNANGRR--SMLFLAQRMTSNYCAGVSASIVHTWTTLSGAGEEDI 481

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
            V+   S +             P     ++ + A+ L   V    L  FLR+   RSEW
Sbjct: 482 RVMTRKSVNN------------PGEPPGIVLSAATSLWVPVNSQRLFEFLRDERLRSEW 528


>gi|345195200|tpg|DAA34965.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 611

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 109/272 (40%), Gaps = 57/272 (20%)

Query: 244 RDFWLLRYTSVLEDGSLVVCERSLKNI-----------------QNGPTMPPVQHFVRAE 286
           R    LRYT  + +G   V + S+  I                  NG T+ P   +    
Sbjct: 333 RSINFLRYTKRVAEGRWAVMDVSVDGILGPPGSRVADAAAAAAAANGVTLVPAW-YTGCR 391

Query: 287 MLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ 345
           +LPSG L+     G   +  V H + +  +VP + RPL+ S   L     +A+L RQ   
Sbjct: 392 LLPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPLFRSGKALGAHRWLASLQRQCEF 451

Query: 346 MA----------QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNG-------FTDEGW 388
           +A           + T ++++  G+R   +  L+QR+   F  AV+G         DE W
Sbjct: 452 LAVLHSSQVSRGGDNTAAAISSMGKR--GVLELAQRMVADFYSAVSGPVTQPSSSIDE-W 508

Query: 389 TVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRF 448
                 G       V     K  G           V++ VL A  ++ L N PP ++ R+
Sbjct: 509 YGSAGAGARRTDTAVRMVTSKKAG----------TVADLVLSASTTVWLPNTPPQLVFRY 558

Query: 449 LR--EHRSEWADNNIDVYSAAAIKVGP-CSLP 477
           LR  + R EW     D + A++  V   CS+P
Sbjct: 559 LRDDQRRGEW-----DAFFASSAAVTELCSVP 585



 Score = 43.9 bits (102), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R+T EQ+  L   Y  C  P +  R+ L  +      +E +Q++ WFQN+R     + +A
Sbjct: 45  RHTLEQIRELRAAYQRCDHPDAPTRRALGAKI----GLEGRQVQYWFQNQRS----QTQA 96

Query: 80  SRLQAVNRKLTAMNKLLMEENDRLQKQV 107
             L   NR +   N  LM EN  L+  +
Sbjct: 97  KALAQNNRVVQQENAALMAENASLRHAI 124


>gi|357168220|ref|XP_003581542.1| PREDICTED: homeobox-leucine zipper protein ROC4-like [Brachypodium
           distachyon]
          Length = 790

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-- 75
           YVR++ EQ++ L+ L+ +CP P  ++R +L R       ++P Q+K WFQNRR + K   
Sbjct: 91  YVRHSSEQIQELQALFDKCPHPDEMQRAELSRRL----FLDPSQVKFWFQNRRTQTKAKL 146

Query: 76  -RKEASRLQAVNRKLTAMNKLLME 98
            R E  +L+  N +L A N  + E
Sbjct: 147 VRDENVQLRQENDRLRAENLCIRE 170



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 147/364 (40%), Gaps = 76/364 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKN--IQNGPTMPPVQHFVRAEMLP 289
           A L  L+ L P R    LR+   L +G+  V + S+    +  G         +    LP
Sbjct: 414 AELQVLSPLVPIRKATFLRFCKQLGEGAWAVVDVSIDGLVVDQGLAAASTTANMNCRRLP 473

Query: 290 SGYLI-RPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           SG L+ +    G   +  V+H + +  SV  + R L  S   L     +A L RQ +  A
Sbjct: 474 SGCLVQQDTRNGFCKVKWVEHAEYDESSVHPLYRSLLRSGLALGAGRWLATLQRQCKCWA 533

Query: 348 QEVTQSSVNGWGRRPA--------ALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM--- 396
               QS V  W +  +        +L  L+QR+   F   V+  +   W+ +  DG    
Sbjct: 534 --TLQSCVAAWEQYSSDVLAAGTQSLLKLAQRMMESFFSGVSASSALEWSKL--DGFTDN 589

Query: 397 --DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH-- 452
             +DV ++   S D+          G P     VLCA  S+ +  V P  L +FL +   
Sbjct: 590 IGNDVRIIERKSVDE---------PGVPP--GVVLCAATSVWML-VTPERLFQFLCDEGT 637

Query: 453 RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGH 512
           R+EW     D+ S      GP             Q +  +A   +    + +++     +
Sbjct: 638 RAEW-----DILSTG----GPM------------QEVTNIAKGQQDGNTVSLLRTN-TTN 675

Query: 513 SPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGF 563
           + ++ I    + L + C+    +A G+   +++AP+D        S  D A  PLLPSGF
Sbjct: 676 TQQNGI----LILQETCT----DASGSM--VVYAPVDIPAMHLVMSGGDSASVPLLPSGF 725

Query: 564 RIIP 567
            I+P
Sbjct: 726 VILP 729


>gi|226505158|ref|NP_001146068.1| uncharacterized protein LOC100279599 [Zea mays]
 gi|219885547|gb|ACL53148.1| unknown [Zea mays]
 gi|414870569|tpg|DAA49126.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 270

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 8/139 (5%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 132

Query: 77  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
           +   +  RL+A    L A ++ L+ +ND L+ QV  L  E    ++ + S T+A ++   
Sbjct: 133 QLETDYDRLKAAYNALAADHQGLLADNDSLRAQVICLT-EKLQGKETSLSATIAAQEVDQ 191

Query: 134 ESVVTSGQHHLTPQHPPRD 152
            +  T+G   L  Q    D
Sbjct: 192 PNEHTTGTEKLLAQQLKDD 210


>gi|357454911|ref|XP_003597736.1| Homeobox-leucine zipper protein GLABRA [Medicago truncatula]
 gi|355486784|gb|AES67987.1| Homeobox-leucine zipper protein GLABRA [Medicago truncatula]
          Length = 794

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 143 YHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 198

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L++   KL   NK L E
Sbjct: 199 ERHENSLLKSEIEKLREKNKTLRE 222



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 35/239 (14%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  LT + P R+ + +RY   L      + + S+  +++       +  V+    PSG
Sbjct: 423 AELQMLTPMVPTREVYFVRYCKRLSGEKWAIVDVSIDKVEDNID----KSLVKCRKRPSG 478

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQM 346
            +I     G   +  V+H++ +   V  + R +  S      +  +A L     R +  M
Sbjct: 479 CIIEDKSNGHCKVVWVEHLECQKSIVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFM 538

Query: 347 AQEVTQSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           A  V      G     GR+  ++  L+QR++  F +A++  +   WT + +   +D+ + 
Sbjct: 539 ATNVPMKDSTGVATLAGRK--SILKLAQRMTWSFCQAISASSFHTWTKVTSKTGEDIRIS 596

Query: 403 VN---SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
                + P + +GL              ++CA +S+ L  + P +L  FLR+   R+EW
Sbjct: 597 SRKNLNDPSEPLGL--------------IVCAVSSIWLP-ISPNVLFDFLRDETRRTEW 640


>gi|449523245|ref|XP_004168634.1| PREDICTED: homeobox-leucine zipper protein HDG11-like, partial
           [Cucumis sativus]
          Length = 324

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 25/132 (18%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+ P Q++ LE  + +CP P   +R+QL RE      +E KQIK WFQN+R + K   
Sbjct: 27  YHRHNPYQIQQLESFFRQCPHPDENQRRQLSREL----GLETKQIKFWFQNKRTQTKAQN 82

Query: 75  QRKEASRLQAVNRKLTAMNKLLME----------------ENDRLQKQVSQLVYENGYFR 118
           +R + S L+  N K+   N  + E                E +R Q+ + +L  EN + +
Sbjct: 83  ERADNSSLRTENEKIQCENLAIREALRNVICPSCGGPPFGEEER-QRNLQKLRLENSHLK 141

Query: 119 -QHTQSTTLATK 129
            +H + + L  K
Sbjct: 142 EEHEKVSNLLAK 153


>gi|15983360|gb|AAL11548.1|AF424554_1 At1g17920/F2H15_22 [Arabidopsis thaliana]
 gi|24111361|gb|AAN46804.1| At1g17920/F2H15_22 [Arabidopsis thaliana]
          Length = 406

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 15/88 (17%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           ++ R+TP Q++ LE  ++EC  P   +R QL RE      + P+QIK WFQNRR ++K +
Sbjct: 24  RFHRHTPHQIQRLESTFNECQHPDEKQRNQLSREL----GLAPRQIKFWFQNRRTQKKAQ 79

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQ 104
            E            A N  L EEND+++
Sbjct: 80  HE-----------RADNCALKEENDKIR 96


>gi|449533164|ref|XP_004173547.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like, partial
           [Cucumis sativus]
          Length = 365

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           KY R+T EQ+  +E L+ E P P   +RQQL +       + P+Q+K WFQNRR + K  
Sbjct: 115 KYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRL----GLSPRQVKFWFQNRRTQIKAI 170

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+A   KL   NK + E
Sbjct: 171 QERHENTLLKAEMEKLREENKAMRE 195


>gi|8920421|emb|CAB96422.1| OCL2 protein [Zea mays]
          Length = 725

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 13/92 (14%)

Query: 11  GSLDNG------KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 64
           G LD G       Y R+ P Q+E LE ++ E   P   +R QL R+      ++P+Q+K 
Sbjct: 16  GDLDGGGSKRKKPYNRHAPRQIEQLEAMFKEFHHPDEKQRAQLSRQL----GLDPRQVKF 71

Query: 65  WFQNRRCREK---QRKEASRLQAVNRKLTAMN 93
           WFQNRR   K   +R+E +RL+  N KL   N
Sbjct: 72  WFQNRRTHLKNQLERQENARLKQENDKLRVEN 103



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 101/449 (22%), Positives = 171/449 (38%), Gaps = 115/449 (25%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+   P R+   LR+   L +G+  V + S+  +Q    +       +   LPSG
Sbjct: 356 AELQMLSPRVPIREVTFLRFCKQLAEGAWAVVDVSIDGLQTDQCL---DTNTKCRRLPSG 412

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEV 350
            +++    G  +   V+H +    SV ++ +PL  S   L     +A L RQ   +A  +
Sbjct: 413 CVLQDTPNGCKVTW-VEHAEYPEASVHQLYQPLMRSGLALGAGRWLATLQRQCECLA--I 469

Query: 351 TQSSVNGWGRRPAA--------LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGM-----D 397
             SS+       AA        L  L++R+   F   +   +   W+++  DG+      
Sbjct: 470 LMSSLAAPEHDSAAVSLEGKWSLLKLARRMMENFCAGMGASSSREWSML--DGLTGSTGK 527

Query: 398 DVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR--EHRSE 455
           DV V+V +S D+            P V   V+ + A+ +   V    LL FLR  E R+E
Sbjct: 528 DVRVMVQNSVDE------------PGVPPGVVLSVATAVWLPVTTERLLNFLRDEELRAE 575

Query: 456 WADNNIDVYSAAA-----IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGV 510
           W     D+ S        ++V    L G+ V    S       HT  H   +        
Sbjct: 576 W-----DILSNGGPMQQVLRVTKGQLDGNSVALLRSD------HTDSHLNSI-------- 616

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPS 561
                       + L + C+  D +     A +++AP+D            + +  LLPS
Sbjct: 617 ------------LILQETCT--DRSG----AMVVYAPVDFPAMQLVLGGGDSKNVALLPS 658

Query: 562 GFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFES 621
           GF I+P  S                   G  G++A            S++T+AF+    S
Sbjct: 659 GFVILPAGSSA-----------------GGVGHKARG----------SLLTVAFQILVNS 691

Query: 622 HMQEHVATMARQYVRSIIS-SVQRVALAL 649
                +   +   V S+IS +++++  AL
Sbjct: 692 QPTAKLTVESVDTVYSLISCTIEKIKAAL 720


>gi|60099377|dbj|BAD89978.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 339

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 7/92 (7%)

Query: 10  TGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 69
           T      KY R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNR
Sbjct: 95  TNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNR 150

Query: 70  RCREK---QRKEASRLQAVNRKLTAMNKLLME 98
           R + K   +R E S L+A   KL   NK + E
Sbjct: 151 RTQIKAIQERHENSLLKAELEKLREENKAMRE 182


>gi|356556218|ref|XP_003546423.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 747

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T +Q++ +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 97  YHRHTADQIKEMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 152

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L++   KL   NK L E
Sbjct: 153 ERHENSLLKSEIEKLKEKNKTLRE 176



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 35/239 (14%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  LT + P R+ + +R+   L      + + S+  +++          V+    PSG
Sbjct: 376 AELQMLTPMVPTREVYFVRFCKQLSAEQWAIVDVSIDKVEDNIDA----SLVKCRKRPSG 431

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQM 346
            +I     G   +  V+H++ +  +V  + R +  S      +  +A L     R +  M
Sbjct: 432 CIIEDKSNGHCKVIWVEHLECQKSAVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFM 491

Query: 347 AQEVTQSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           A  V      G     GR+  ++  L+QR++  F  A+   +   WT   +   +D+ + 
Sbjct: 492 ATNVPMKDSTGVATLAGRK--SILKLAQRMTWSFCHAIGASSFHTWTKFTSKTGEDIRIS 549

Query: 403 VN---SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
                + P + +GL              +LCA  S+ L  V P +L  FLR+   R+EW
Sbjct: 550 SRKNLNDPGEPLGL--------------ILCAVCSVWLP-VSPNVLFDFLRDETRRTEW 593


>gi|125531139|gb|EAY77704.1| hypothetical protein OsI_32745 [Oryza sativa Indica Group]
          Length = 442

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/34 (76%), Positives = 31/34 (91%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQ 46
           +D+GKYV+YTP+QVEALER+Y ECPKPS  RRQQ
Sbjct: 380 MDSGKYVQYTPDQVEALERVYAECPKPSFSRRQQ 413


>gi|413919222|gb|AFW59154.1| outer cell layer2 [Zea mays]
          Length = 863

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 14/116 (12%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
           Y R+TP Q+E LE ++ E   P   +R QL R+      ++P+Q+K WFQNRR   K   
Sbjct: 140 YNRHTPRQIEQLEAMFKEFHHPDEKQRAQLSRQL----GLDPRQVKFWFQNRRTHLKCLT 195

Query: 78  EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
             S L          N+L  +EN RL+ +  +L  EN   R+       A +D  C
Sbjct: 196 WLSLLHGPE---LGKNQLERQENARLKHENDKLRVENLSIRE-------AIRDLVC 241



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 102/440 (23%), Positives = 172/440 (39%), Gaps = 97/440 (22%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+   L +G+  V + S+  +Q    +       +   LPSG
Sbjct: 494 AELQMLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLQTDQCL---ATNTKCRRLPSG 550

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEV 350
            +++    G  +   V+H +    SV ++ +PL  S   L     +A L RQ   +A  +
Sbjct: 551 CVLQDTPNGCKVTW-VEHAEYPEASVHQLYQPLMRSGLALGAGRWLATLQRQCECLA--I 607

Query: 351 TQSSVNGWGRRPAA--------LRALSQRLSRGFNEAVNGFTDEGWTVM----GNDGMDD 398
             SS+       AA        L  L++R+   F   +   +   W+++    G+ G  D
Sbjct: 608 LMSSLAAPEHDSAAVSLEGKWSLLKLARRMMENFCAGMGASSSREWSMLDGFTGSTG-KD 666

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLR--EHRSEW 456
           V V+V +S D+            P V   V+ + A+ +   V P  L  FLR  E R+EW
Sbjct: 667 VRVMVQNSVDE------------PGVPPGVVLSVATAVWLPVTPERLFNFLRDEELRAEW 714

Query: 457 ADNNIDVYSAAA-----IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVG 511
                D+ S        +++    L G+ V       +L   HT  H   + +++     
Sbjct: 715 -----DILSNGGPMQQVLRISKGQLDGNSVA------LLRADHTDSHLNSILILQETCTD 763

Query: 512 HSPEDAIM-PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
            S    +  P D   +QL  G  +                  + +  LLPSGF I+P  S
Sbjct: 764 RSGAMVVYTPVDFPAMQLVLGGGD------------------SKNVALLPSGFVILPAGS 805

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
                        AS L     G++A            S++T+AF+    S     +   
Sbjct: 806 ------------TASGL-----GHKARG----------SLLTVAFQILVNSQPTAKLTVE 838

Query: 631 ARQYVRSIIS-SVQRVALAL 649
           +   V S+IS +++++  AL
Sbjct: 839 SVDTVYSLISCTIEKIKAAL 858


>gi|60099371|dbj|BAD89976.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 397

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 7/92 (7%)

Query: 10  TGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 69
           T      KY R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNR
Sbjct: 95  TNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNR 150

Query: 70  RCREK---QRKEASRLQAVNRKLTAMNKLLME 98
           R + K   +R E S L+A   KL   NK + E
Sbjct: 151 RTQIKAIQERHENSLLKAELEKLREENKAMRE 182


>gi|296088020|emb|CBI35303.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 146/367 (39%), Gaps = 86/367 (23%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSL---KNIQNGPTMPPVQHFVRAEMLPS 290
           L  L++L P R+F+ LRY   +E GS  + + S    ++ Q  P  P       +  LPS
Sbjct: 341 LQVLSSLVPTREFYFLRYCQQIEQGSWAIVDVSYDFPRDNQFAPQNP-------SHRLPS 393

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTVLAQKTTMAALRQLRQ---- 345
           G LI+    G S +  V+H+++E  +    + R L         +  +A L+++ +    
Sbjct: 394 GCLIQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGLAFGAERWLATLQRMCERFAC 453

Query: 346 -MAQEVTQSSVNGWGRRPAALRA---LSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
            M +  +   + G    P   R+   L+QR+   F  +++      WT +   G+++V V
Sbjct: 454 LMVKGTSTRDLGGVIPSPDGKRSMMKLAQRMVNNFCASISTSNGHRWTTLS--GLNEVGV 511

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS--EWA-- 457
            V               N  P   N V+ + A+ +   V P  +  F R+ R+  +W   
Sbjct: 512 RVT-----------IHKNTDPGQPNGVVLSAATTIWLPVSPQNVFNFFRDERTRPQWDVL 560

Query: 458 DNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA 517
            N   V   A I  GP   PG+ +       +L   +T ++                   
Sbjct: 561 SNGNAVQEVAHIANGPH--PGNCIS------VLRAFNTSQN------------------- 593

Query: 518 IMPRDMFLLQLCSGMDENAVGTCAEL-IFAPIDASFADDA---------PLLPSGFRIIP 567
               +M +LQ      E+ + +   L I+ P+D    + A         PLLPSGF I P
Sbjct: 594 ----NMLILQ------ESCIDSSGSLVIYCPVDLPAINIAMSGEDPSYIPLLPSGFTISP 643

Query: 568 ---LDSG 571
              LD G
Sbjct: 644 DGRLDQG 650



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 29  RYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELA----LAPRQIKFWFQNRRTQMKAQ 84

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R +   L+  N K+   N  + E
Sbjct: 85  HERADNCALRVENDKIRCENIAIRE 109


>gi|124359623|gb|ABN06007.1| Homeodomain-related [Medicago truncatula]
          Length = 365

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 143 YHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 198

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L++   KL   NK L E
Sbjct: 199 ERHENSLLKSEIEKLREKNKTLRE 222


>gi|1208940|gb|AAC37514.1| homeodomain protein 1 [Helianthus annuus]
          Length = 682

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T +Q+  +E L+ E P P   +RQQL +       + P+Q+K WFQNRR + K   
Sbjct: 99  YHRHTADQIREMEALFKESPHPDEKQRQQLSKRL----GLHPRQVKFWFQNRRTQIKTIQ 154

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L++   KL   NKLL E
Sbjct: 155 ERHENSLLKSELDKLGEENKLLRE 178


>gi|31339105|dbj|BAC77159.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 131

 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 8/86 (9%)

Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ- 75
          +Y R TP+Q++ LE ++ ECP P   +R +L R      N+E +Q+K WFQNRR + KQ 
Sbjct: 4  RYHRXTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKQT 59

Query: 76 ---RKEASRLQAVNRKLTAMNKLLME 98
             R E + L+  N KL A N  + E
Sbjct: 60 QIERHENALLRQENDKLRAENMTIRE 85


>gi|449527811|ref|XP_004170903.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           GLABRA 2-like, partial [Cucumis sativus]
          Length = 416

 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/355 (21%), Positives = 150/355 (42%), Gaps = 77/355 (21%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ-NGPTMPPVQHFVRAEMLPSGYLIR 295
           LT L P R+ + +R+   L+     + + S++N++ N   +  V++  R    PSG +I+
Sbjct: 43  LTPLVPTREMYFIRHCKQLDAEQWAIVDVSIENVEDNNIDVSLVKYRKR----PSGCIIK 98

Query: 296 PCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEV 350
               G   + +V+H++     V  + R +  + T    +  MA L     R    MA  +
Sbjct: 99  DEPNGHCKVTMVEHLECVKNKVHNLYRSIVNNGTAFGARHWMATLQLQCERSAFFMATNI 158

Query: 351 ---TQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT-VMGNDGMDDVTVLVN-- 404
                + V+    R + L+ L+QR+S  F++AV   + + WT V+G  G +D+ V     
Sbjct: 159 PMKDSTGVSTLAGRKSTLK-LAQRMSCSFSQAVAASSYQTWTKVVGKSG-EDIRVCSRKN 216

Query: 405 -SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNI 461
            S P + +G+              +LCA +S+ L  + P +L  F R+   RS+W     
Sbjct: 217 LSDPGEPIGV--------------ILCAVSSLWLP-LSPHLLFDFFRDESRRSQWD---- 257

Query: 462 DVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPR 521
                                 FG      +A+  + ++    + ++ +G    +     
Sbjct: 258 --------------------AMFGGDKAKTIANLAKGQDRGNSVTIQTIGSKENNN---N 294

Query: 522 DMFLLQLCSGMDENAVGTCAELIFAPIDASF---------ADDAPLLPSGFRIIP 567
           +M++LQ     D +   + + ++++ +D +          +    +LPSGF I+P
Sbjct: 295 NMWILQ-----DSSTNSSESMVVYSGVDVTSMQSVMSGCDSGSVTILPSGFXILP 344


>gi|77378038|gb|ABA70760.1| baby boom interacting protein 2 [Brassica napus]
          Length = 697

 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
          +Y R+T +Q++ LE ++ EC  P   +R  L R+     N++P+Q+K WFQNRR + K  
Sbjct: 15 RYHRHTAKQIQDLESVFKECAHPDEKQRLDLSRKL----NLDPRQVKFWFQNRRTQMKTQ 70

Query: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
           +R E + L+  N KL A N  + E
Sbjct: 71 IERHENALLRQENDKLRAENMSVRE 95



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 102/445 (22%), Positives = 178/445 (40%), Gaps = 104/445 (23%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R    LR+     +G   V + S+ +I+ G +            LPSG
Sbjct: 325 AELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS-------CRRLPSG 377

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ-----M 346
            L++    G S +  ++H + +   +  + RPL         +  MAAL++  +     M
Sbjct: 378 CLVQDMANGYSKVTWIEHTEYDETRIHRLYRPLLSCGLAFGAQRWMAALQRQCECLTILM 437

Query: 347 AQEVTQS------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DV 399
           +  V+ S      S NG   R + L+ L++R++  F   V   + + W+ +    +D DV
Sbjct: 438 SSTVSPSRSPTPISCNG---RKSMLK-LAKRMTDNFCGGVCASSLQKWSKLNVGNVDEDV 493

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWA 457
            ++   S +             P     ++   A+ +   V P  L  FL     RSEW 
Sbjct: 494 RIMTRKSVND------------PGEPPGIVLNAATSVWMPVSPKRLFDFLGNERLRSEW- 540

Query: 458 DNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA 517
               D+ S      GP             Q +  +A   +H   + +++   +  +    
Sbjct: 541 ----DILSNG----GPM------------QEMAHIAKGHDHSNSVSLLRATAINANQS-- 578

Query: 518 IMPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPL 568
                M +LQ  S    +AVG  A +++AP+D        +  D A   LLPSGF I+P 
Sbjct: 579 ----SMLILQETS---IDAVG--AVVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILP- 628

Query: 569 DSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMR---SVMTIAFEFAFESHMQE 625
                 S+P R+ +                N + +  CM    S++T+AF+    S    
Sbjct: 629 ------SAPQRSEE---------------RNGNGSGGCMEEGGSLLTVAFQILVNSLPTA 667

Query: 626 HVATMARQYVRSIIS-SVQRVALAL 649
            +   + + V ++IS +VQ++  AL
Sbjct: 668 KLTVESVETVNNLISCTVQKIKAAL 692


>gi|225464265|ref|XP_002271012.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Vitis
           vinifera]
          Length = 715

 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 146/367 (39%), Gaps = 86/367 (23%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSL---KNIQNGPTMPPVQHFVRAEMLPS 290
           L  L++L P R+F+ LRY   +E GS  + + S    ++ Q  P  P       +  LPS
Sbjct: 341 LQVLSSLVPTREFYFLRYCQQIEQGSWAIVDVSYDFPRDNQFAPQNP-------SHRLPS 393

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTVLAQKTTMAALRQLRQ---- 345
           G LI+    G S +  V+H+++E  +    + R L         +  +A L+++ +    
Sbjct: 394 GCLIQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGLAFGAERWLATLQRMCERFAC 453

Query: 346 -MAQEVTQSSVNGWGRRPAALRA---LSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
            M +  +   + G    P   R+   L+QR+   F  +++      WT +   G+++V V
Sbjct: 454 LMVKGTSTRDLGGVIPSPDGKRSMMKLAQRMVNNFCASISTSNGHRWTTLS--GLNEVGV 511

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS--EWA-- 457
            V               N  P   N V+ + A+ +   V P  +  F R+ R+  +W   
Sbjct: 512 RVT-----------IHKNTDPGQPNGVVLSAATTIWLPVSPQNVFNFFRDERTRPQWDVL 560

Query: 458 DNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA 517
            N   V   A I  GP   PG+ +       +L   +T ++                   
Sbjct: 561 SNGNAVQEVAHIANGPH--PGNCIS------VLRAFNTSQN------------------- 593

Query: 518 IMPRDMFLLQLCSGMDENAVGTCAEL-IFAPIDASFADDA---------PLLPSGFRIIP 567
               +M +LQ      E+ + +   L I+ P+D    + A         PLLPSGF I P
Sbjct: 594 ----NMLILQ------ESCIDSSGSLVIYCPVDLPAINIAMSGEDPSYIPLLPSGFTISP 643

Query: 568 ---LDSG 571
              LD G
Sbjct: 644 DGRLDQG 650



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 29  RYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELA----LAPRQIKFWFQNRRTQMKAQ 84

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R +   L+  N K+   N  + E
Sbjct: 85  HERADNCALRVENDKIRCENIAIRE 109


>gi|224118060|ref|XP_002317722.1| predicted protein [Populus trichocarpa]
 gi|222858395|gb|EEE95942.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE ++ E P P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 29  RYHRHTAHQIQKLESMFKEFPHPDEKQRLQLSREL----GLAPRQIKFWFQNRRTQMKAQ 84

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R + S L+A N K+   N  + E
Sbjct: 85  HERADNSSLRAENDKIRCENIAIRE 109



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 97/438 (22%), Positives = 171/438 (39%), Gaps = 91/438 (20%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           L  L+ L P R+F +LRY   +E G   +   S         +P      +   LPSG L
Sbjct: 340 LQVLSPLVPTREFCILRYCQQIEQGLWAIVSVSYD-------IPQFASQFQCHRLPSGCL 392

Query: 294 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTVLAQKTTMAALRQL--RQMAQEV 350
           I+    G S +  V+H+++E  +   ++ R L  S      +  +A L+++  R   Q V
Sbjct: 393 IQDMPNGYSKVIWVEHVEIEDKAPTHQLYRDLIHSGLAFGAERWLATLQRMCERVACQMV 452

Query: 351 TQSSVNGWGR---RPAALRA---LSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
           + SS    G     P   R+   L QR+   F  +++      W+ +   G+ DV V + 
Sbjct: 453 SGSSTRDLGGVIPSPEGKRSMMKLGQRMVSSFCSSISTSNSHRWSTLS--GLHDVGVRIT 510

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNID 462
                         N  P   N V+ + A+     V P  +  F ++   R +W     D
Sbjct: 511 -----------LHKNTDPGQPNGVVLSAATTFSLPVSPQNVFNFFKDEKTRPQW-----D 554

Query: 463 VYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           V S+           G+ V     Q +  +A+       + V++      +        +
Sbjct: 555 VLSS-----------GNAV-----QEVAHIANGSHPGNCISVLRAYNTSQN--------N 590

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDA---------PLLPSGFRIIPLDSGKE 573
           M +LQ  S MD +     + +++ P+D    + A         PLLPSGF I P      
Sbjct: 591 MLILQE-SCMDSSG----SLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTISP------ 639

Query: 574 TSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQ 633
              P++          G   + ++N     +    S++T+AF+    S     +   +  
Sbjct: 640 DGYPDQ----------GDGASTSSNTQGRMARSSGSLITVAFQILVSSLPSARLNLESVN 689

Query: 634 YVRSII-SSVQRVALALS 650
            V S+I +++Q++  ALS
Sbjct: 690 TVNSLIGTTIQQIKAALS 707


>gi|359490389|ref|XP_003634081.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Vitis vinifera]
          Length = 783

 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 15/88 (17%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           KY R+T EQ+  LE  + E P P   +R  L R+     N+EP+Q+K WFQNRR + K +
Sbjct: 104 KYHRHTQEQINELETCFKEWPHPDEKQRLDLSRKL----NLEPRQVKFWFQNRRTQMKNQ 159

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQ 104
            E              N +L +END+L+
Sbjct: 160 LERHE-----------NVMLRQENDKLR 176


>gi|356550528|ref|XP_003543638.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 762

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 111 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 166

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L++   KL   NK L E
Sbjct: 167 ERHENSLLKSEIEKLKEKNKSLRE 190



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/353 (22%), Positives = 141/353 (39%), Gaps = 67/353 (18%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  LT + P R+ + +R+   L      + + S+  +++          V+    PSG
Sbjct: 391 AELQMLTPMVPTREVYFVRFCKQLSAEQWAIVDVSIDKVEDNIDA----SLVKCRKRPSG 446

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQM 346
            +I     G   +  V+H + +  +V  + R +  S      +  +A L     R +  M
Sbjct: 447 CIIEDKSNGHCKVIWVEHSECQKSAVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFM 506

Query: 347 AQEVTQSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           A  V      G     GR+  ++  L+QR++  F  A+   +   WT + +   +D+ + 
Sbjct: 507 ATNVPMKDSTGVATLAGRK--SILKLAQRMTWSFCHAIGASSIHAWTKVTSKTGEDIRIS 564

Query: 403 VN---SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWA 457
                + P + +GL              +LCA  S+ L  V P +L  FLR+   R+EW 
Sbjct: 565 SRKNLNDPGEPLGL--------------ILCAVCSVWLP-VSPNVLFDFLRDENRRTEW- 608

Query: 458 DNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA 517
               D+ S+               GT  S   L       +   ++ IKL+      E++
Sbjct: 609 ----DIMSSG--------------GTVQSIANLAKGQDRGNAVAIQTIKLK------ENS 644

Query: 518 IMPRDMFLLQLCSGMDENAVG-TCAEL--IFAPIDASFADDAPLLPSGFRIIP 567
           +      L   C+ + E+ V   C ++  I + +    + +  +LPSGF IIP
Sbjct: 645 V----WILQDSCTNLYESMVAYACVDITGIQSVMTGCDSSNLAILPSGFSIIP 693


>gi|297743262|emb|CBI36129.3| unnamed protein product [Vitis vinifera]
          Length = 750

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 98  YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 153

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L++   KL   NK + E
Sbjct: 154 ERHENSLLKSEMEKLRDENKAMRE 177



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 29/236 (12%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  LT + P R+ + +R+   L      + + S+  +++          V+    PSG
Sbjct: 379 AELQMLTPMVPTREVYFVRFCKQLSADQWAIVDVSIDKVEDNIDA----SLVKCRKRPSG 434

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQM 346
            +I     G   +  V+H++ +  +V  + R +  S      K  +A L     R +  M
Sbjct: 435 CIIEDKSNGHCKVIWVEHLECQKSTVHTMYRQIVNSGLAFGAKHWIATLQLQCERLVFFM 494

Query: 347 AQEVTQSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           A  V     +G     GR+  ++  L+QR++  F  A+   +   WT + +   DD+ V 
Sbjct: 495 ATNVPTKDSSGVATLAGRK--SILKLAQRMTWSFCRALGASSFNSWTKVSSKTGDDIRVA 552

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
                      NL+   G P     +LCA +S+ L  V P ++  FLR+   RSEW
Sbjct: 553 SRK--------NLNDP-GEP--QGVILCAVSSVWLP-VAPHVIFDFLRDEARRSEW 596


>gi|225442611|ref|XP_002284502.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Vitis
           vinifera]
          Length = 754

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 102 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 157

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L++   KL   NK + E
Sbjct: 158 ERHENSLLKSEMEKLRDENKAMRE 181



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 29/236 (12%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  LT + P R+ + +R+   L      + + S+  +++          V+    PSG
Sbjct: 383 AELQMLTPMVPTREVYFVRFCKQLSADQWAIVDVSIDKVEDNIDA----SLVKCRKRPSG 438

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQM 346
            +I     G   +  V+H++ +  +V  + R +  S      K  +A L     R +  M
Sbjct: 439 CIIEDKSNGHCKVIWVEHLECQKSTVHTMYRQIVNSGLAFGAKHWIATLQLQCERLVFFM 498

Query: 347 AQEVTQSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           A  V     +G     GR+  ++  L+QR++  F  A+   +   WT + +   DD+ V 
Sbjct: 499 ATNVPTKDSSGVATLAGRK--SILKLAQRMTWSFCRALGASSFNSWTKVSSKTGDDIRVA 556

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
                      NL+   G P     +LCA +S+ L  V P ++  FLR+   RSEW
Sbjct: 557 SRK--------NLNDP-GEP--QGVILCAVSSVWLP-VAPHVIFDFLRDEARRSEW 600


>gi|213950359|gb|ACJ54444.1| GL2b [Brassica napus]
          Length = 750

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 99  YHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 154

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L+A   KL   NK + E
Sbjct: 155 ERHENSLLKAELEKLREENKAMRE 178



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 25/248 (10%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           LT + P R+ + +R    L     V+ + S+   ++  +       +R    PSG +I  
Sbjct: 380 LTPVVPTREVYFVRSCRQLSPEKWVIVDVSVSVEEDNNSTEKEGSLLRCRKRPSGCIIED 439

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEV- 350
              G S +  V+H+DL   +V  + R    +      +  +A L     R +  MA  V 
Sbjct: 440 TSNGHSKVTWVEHLDLSASTVQPLFRSFVNTGLAFGARHWVATLQLHCERLVFFMATNVP 499

Query: 351 TQSS--VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           T+ S  V     R + L+ ++QR+++ F  A+   +   W  +      D+ V   SS  
Sbjct: 500 TKDSLGVTTLAGRKSVLK-MAQRMTQSFYRAIAASSYHQWNKITTKTGQDMRV---SSRK 555

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWA--DNNIDVY 464
            L         G P  +  ++CA +S+ L  V P +L  F R+   R EW    N   V 
Sbjct: 556 NLHD------PGEP--TGVIVCASSSLWLP-VSPTLLFDFFRDETRRHEWDALSNGAHVQ 606

Query: 465 SAAAIKVG 472
           S  ++  G
Sbjct: 607 SIVSLSKG 614


>gi|213950363|gb|ACJ54446.1| GL2a [Brassica oleracea]
          Length = 750

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 99  YHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 154

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L+A   KL   NK + E
Sbjct: 155 ERHENSLLKAELEKLREENKAMRE 178



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 146/364 (40%), Gaps = 59/364 (16%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           LT + P R+ + +R    L     V+ + S+   ++  +       +R    PSG +I  
Sbjct: 380 LTPVVPTREVYFVRSCRQLSPEKWVIVDVSVSVEEDNNSTEKEGSLLRCRKRPSGCIIED 439

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEV- 350
              G S +  V+H+DL   +V  + R    +      +  +A L     R +  MA  V 
Sbjct: 440 TSNGHSKVTWVEHLDLSASTVQPLFRSFVNTGLAFGARHWVATLQLHCERLVFFMATNVP 499

Query: 351 TQSS--VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           T+ S  V     R + L+ ++QR+++ F  A+   +   W  +      D+ V   SS  
Sbjct: 500 TKDSLGVTTLAGRKSVLK-MAQRMTQSFYRAIAASSYHQWNKITTKTGQDMRV---SSRK 555

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
            L         G P  +  ++CA +S+ L  V P +L  F R+   R EW     D  S 
Sbjct: 556 NLHD------PGEP--TGVIVCASSSLWLP-VSPTLLFDFFRDETRRHEW-----DALSN 601

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM--PRDMF 524
            A      SL  S+    G+ V +    T++  E    +  +   +S E  ++  P D+ 
Sbjct: 602 GAHVQSIVSL--SKGQDRGNSVSI---QTVKSREKSTWVLQDNCTNSYESVVVYAPVDI- 655

Query: 525 LLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLA 584
                            +L+ A  D S   +  +LP GF IIP   G E+    R L ++
Sbjct: 656 --------------NTTQLVIAGHDPS---NIQILPCGFSIIP--DGVES----RQLVIS 692

Query: 585 SALE 588
           SA E
Sbjct: 693 SAQE 696


>gi|213950357|gb|ACJ54443.1| GL2a [Brassica napus]
          Length = 750

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 99  YHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 154

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L+A   KL   NK + E
Sbjct: 155 ERHENSLLKAELEKLREENKAMRE 178



 Score = 45.8 bits (107), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 26/248 (10%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           LT + P R+ + +R    L      + + S+ +++           +R    PSG +I  
Sbjct: 380 LTPVVPTREVYFVRSCRQLSPEKWAIVDVSV-SMEEDNNAEKEGSLLRCRKRPSGCIIED 438

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEV- 350
              G S +  V+H+DL   +V  + R    +      K  +A L     R +  MA  V 
Sbjct: 439 TSNGHSKVTWVEHLDLSASTVQPLFRSFVNTGLAFGAKHWVATLQLHCERLVFFMATNVP 498

Query: 351 TQSS--VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           T+ S  V     R + L+ ++QR+++ F  A+   +   W  +      D+ V   SS  
Sbjct: 499 TKDSLGVTTLAGRKSVLK-MAQRMTQSFYRAIAASSYHQWNKITTKTGQDMRV---SSRK 554

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWA--DNNIDVY 464
            L         G P  +  ++CA +S+ L  V P +L  F R+   R EW    N   V 
Sbjct: 555 NLHD------PGEP--TGVIVCASSSLWLP-VSPTLLFDFFRDETRRHEWDALSNGAHVQ 605

Query: 465 SAAAIKVG 472
           S  ++  G
Sbjct: 606 SIVSLSKG 613


>gi|224073973|ref|XP_002304207.1| predicted protein [Populus trichocarpa]
 gi|222841639|gb|EEE79186.1| predicted protein [Populus trichocarpa]
          Length = 759

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 14/116 (12%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 109 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 164

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKD 130
           +R E S L+      T M+K L EEN  +++ +++    N      ++ T L T++
Sbjct: 165 ERHENSLLK------TEMDK-LREENKTMRETINKACCPNCGTATTSRGTALTTEE 213



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 145/355 (40%), Gaps = 81/355 (22%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           LT + P R+ + +RY   L      + + S+  +++          V+    PSG +I  
Sbjct: 393 LTPMVPTREVYFVRYCKQLNAEQWAIVDVSIDKVEDNIDAS----LVKCRKRPSGCIIED 448

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEVT 351
              G   +  V+H++ +  +V  + R +  S      +  +A L     R +  MA  V 
Sbjct: 449 KSNGHCKVIWVEHLECQKSAVHTMFRTVVHSGLAFGARHWIATLQLQCERLVFFMATNVP 508

Query: 352 QSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSS- 406
                G     GR+  ++  L+QR++  F  A+   +   W+ + +   +D+ +    + 
Sbjct: 509 TKDSTGVATLAGRK--SILKLAQRMTWSFCRAIGASSYHTWSKVSSKTGEDIRISSRKNL 566

Query: 407 --PDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNID 462
             P + +GL              +LCA +S+ L  VPP IL  FLR+   R+EW     D
Sbjct: 567 NEPGEPVGL--------------ILCAVSSVWLP-VPPHILFDFLRDEARRNEW-----D 606

Query: 463 VYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           + S      GP             Q I  L    +      ++K++    S E+     +
Sbjct: 607 IMSNG----GPV------------QTIANLIKGQDRGNAAAILKMK----SKEN-----N 641

Query: 523 MFLLQ-LCSGMDENAVGTCAELIFAPIDASF---------ADDAPLLPSGFRIIP 567
           M++LQ  C+   E+ V      I+AP+D +          + +  +LPSGF I+P
Sbjct: 642 MWVLQDSCTNAYESMV------IYAPVDTNGMQSVINGCDSSNLAILPSGFSILP 690


>gi|115440407|ref|NP_001044483.1| Os01g0788800 [Oryza sativa Japonica Group]
 gi|75252913|sp|Q5ZAY0.1|TF1_ORYSJ RecName: Full=Homeobox-leucine zipper protein TF1; AltName:
           Full=HD-ZIP protein TF1; AltName: Full=Homeodomain
           transcription factor TF1; AltName: Full=Protein
           TRANSCRIPTION FACTOR 1; Short=OsTF1
 gi|53792430|dbj|BAD53268.1| transcription factor 1 [Oryza sativa Japonica Group]
 gi|56784272|dbj|BAD81954.1| transcription factor 1 [Oryza sativa Japonica Group]
 gi|113534014|dbj|BAF06397.1| Os01g0788800 [Oryza sativa Japonica Group]
          Length = 709

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 145/707 (20%), Positives = 250/707 (35%), Gaps = 180/707 (25%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--K 77
           R T +Q E LE  +  C  P   +++ L       + +   Q+K WFQN+R + K    K
Sbjct: 72  RLTGKQSEVLEGFFSICGHPDDGQKRHLSET----TGLGLDQVKFWFQNKRTQVKTMCWK 127

Query: 78  EASRLQAVNRKLTAMNKLLMEENDR---------------------LQKQVSQLVYENGY 116
           E       N KL+  N++L +EN R                     L  ++ +L+ ++ +
Sbjct: 128 EE------NYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEW 181

Query: 117 FRQHTQ-------STTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEF 169
            +Q          +  LA +  S    V SGQH               +  +A+  +   
Sbjct: 182 LQQEIARSNGTPPAANLAFQLNSSADYVFSGQH-----------DQQMIAELAKNAMHAL 230

Query: 170 LSKATGTAVEWVQMPGMK-------------PGPDSVGIVAISHGCSGVAARACGLVGLE 216
           +  A      W  +PG               PG +S   +    G    A RA  +V ++
Sbjct: 231 IILAESHVALWFPVPGCSYEVLNKMAYDQAYPGDNSANAI----GFKTEATRAVSMVMMD 286

Query: 217 PTRVAEILKDRPRGSAILY------ALTT---------------------------LAPA 243
              V + L D P      +      A+T                            L PA
Sbjct: 287 YKSVVDFLMD-PYNYRTFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPA 345

Query: 244 RDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSI 303
           R    LRY +VL +G +VV + SL    +G        F +   +PSG+LI+        
Sbjct: 346 RKCTFLRYCNVLNEGLVVVIDVSL---DDGSI------FSKCRKMPSGFLIQSIRPNSCK 396

Query: 304 IHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ---LRQMAQEVTQSSVNGWGR 360
           +  ++H+  +   V E+ +P        A++      RQ   +R +    T   V+  GR
Sbjct: 397 VTAIEHVLADDTGVHELYQPCMNGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTKGR 456

Query: 361 RPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVLVNSSPDKLMGLNLSFAN 419
           +   L  L+  L   F   +       WTV+   G + D+ V    + +           
Sbjct: 457 K--NLMKLADDLLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRRTTEG---------- 504

Query: 420 GFPAVSNAVLCAKASMLLQNVPPAILLRFLRE--HRSEWADNNIDVYSAAAIKVGPCSLP 477
              +  NA+L   AS+ L  +P       LR   HR +W     DV    ++     ++ 
Sbjct: 505 --SSSYNAILSVTASLRLP-LPMRKTFDLLRNLTHRCKW-----DVLVHGSVVKEEVTI- 555

Query: 478 GSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAV 537
              VG   +  +L        +    +I L+  G+    + M        + S +D   +
Sbjct: 556 ARGVGNDDTVTVLHCKRAGREDRGRTMI-LQNNGYDASGSFM--------VYSQIDSELM 606

Query: 538 GTCAELIFAPIDASFADDAP-LLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRA 596
            T   ++ +P D       P L P+GF ++P     + S         S + +G  G   
Sbjct: 607 NT---MVLSPSDLPPGRGGPSLYPTGFSLLPDVEAAQDS---------SGIALGEVGG-- 652

Query: 597 TNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQ 643
                       ++MT+ F+   +      +A+  R Y RS  S+++
Sbjct: 653 ------------TLMTMGFQIPVK------LASGDRMYSRSAASAIR 681


>gi|46242599|gb|AAS83417.1| Hox16 [Oryza sativa Japonica Group]
          Length = 353

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 32  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 87

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
              ++  RL+A    L A +  L+++N RL  QV  L
Sbjct: 88  QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSL 124


>gi|45593096|gb|AAS68137.1| homeodomain leucine zipper protein 16 [Oryza sativa Japonica Group]
          Length = 353

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 32  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 87

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
              ++  RL+A    L A +  L+++N RL  QV  L
Sbjct: 88  QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSL 124


>gi|255549944|ref|XP_002516023.1| homeobox protein, putative [Ricinus communis]
 gi|223544928|gb|EEF46443.1| homeobox protein, putative [Ricinus communis]
          Length = 758

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 109 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 164

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L+    KL   NK + E
Sbjct: 165 ERHENSLLKTEMEKLRDENKAMRE 188



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/354 (20%), Positives = 143/354 (40%), Gaps = 79/354 (22%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           LT + P R+ + +RY   L      + + S+ N+++          V+    PSG +I  
Sbjct: 392 LTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDNVEDNIDA----SLVKCRKRPSGCIIED 447

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEVT 351
              G   +  V+H++ +  +V  + R +  +      +  +A L     R +  MA  V 
Sbjct: 448 KSNGHCKVTWVEHLECQKSTVHTIYRTIVNTGLAFGARHWVATLQLQCERIVFFMATNVP 507

Query: 352 QSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN--- 404
                G     GR+  ++  L+QR++  F  A+   +   W  + +   +D+ +      
Sbjct: 508 TKDSTGVATLAGRK--SILKLAQRMTWSFCRAIGASSYHTWNRVTSKTGEDIRISSRKNL 565

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE--HRSEWADNNID 462
           + P + +G+              +LCA +S+ L  V P +L  +LR+  HR+EW     D
Sbjct: 566 NDPAEPLGV--------------ILCAVSSVWLP-VSPHVLFDYLRDDTHRNEW-----D 605

Query: 463 VYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           + S                   G QV   +A+  + ++    + ++ +  +        +
Sbjct: 606 IMSN------------------GGQV-QSIANLAKGQDRGNAVTIQTMKSNEN------N 640

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASF---------ADDAPLLPSGFRIIP 567
           M++LQ C      ++     +++AP+D +          +    +LPSGF I+P
Sbjct: 641 MWVLQDCCTNAYESI-----VVYAPVDINGMQSVITGCDSSSTAILPSGFAILP 689


>gi|147856728|emb|CAN83483.1| hypothetical protein VITISV_009450 [Vitis vinifera]
          Length = 717

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 145/367 (39%), Gaps = 86/367 (23%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSL---KNIQNGPTMPPVQHFVRAEMLPS 290
           L  L+ L P R+F+ LRY   +E GS  + + S    ++ Q  P  P       +  LPS
Sbjct: 343 LQVLSXLVPTREFYFLRYCQQIEQGSWAIVDVSYDFPRDNQFAPQNP-------SHRLPS 395

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTVLAQKTTMAALRQLRQ---- 345
           G LI+    G S +  V+H+++E  +    + R L         +  +A L+++ +    
Sbjct: 396 GCLIQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGLAFGAERWLATLQRMCERFAC 455

Query: 346 -MAQEVTQSSVNGWGRRPAALRA---LSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
            M +  +   + G    P   R+   L+QR+   F  +++      WT +   G+++V V
Sbjct: 456 LMVKGTSTRDLGGVIPSPDGKRSMMKLAQRMVNNFCASISTSNGHRWTTLS--GLNEVGV 513

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS--EWA-- 457
            V               N  P   N V+ + A+ +   V P  +  F R+ R+  +W   
Sbjct: 514 RVT-----------IHKNTDPGQPNGVVLSAATTIWLPVSPQNVFNFFRDERTRPQWDVL 562

Query: 458 DNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA 517
            N   V   A I  GP   PG+ +       +L   +T ++                   
Sbjct: 563 SNGNAVQEVAHIANGPH--PGNCIS------VLRAFNTSQN------------------- 595

Query: 518 IMPRDMFLLQLCSGMDENAVGTCAEL-IFAPIDASFADDA---------PLLPSGFRIIP 567
               +M +LQ      E+ + +   L I+ P+D    + A         PLLPSGF I P
Sbjct: 596 ----NMLILQ------ESCIDSSGSLVIYCPVDLPAINIAMSGEDPSYIPLLPSGFTISP 645

Query: 568 ---LDSG 571
              LD G
Sbjct: 646 DGRLDQG 652



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE ++ ECP P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 31  RYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELA----LAPRQIKFWFQNRRTQMKAQ 86

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R +   L+  N K+   N  + E
Sbjct: 87  HERADNCALRVENDKIRCENIAIRE 111


>gi|15148918|gb|AAK84886.1|AF402605_1 homeodomain leucine zipper protein HDZ2 [Phaseolus vulgaris]
          Length = 327

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 8/111 (7%)

Query: 4   SCKDGKTGSLDN-GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           +C D   G     GK  R T EQV+ LER +    K    R+ QL +E      ++P+Q+
Sbjct: 72  NCDDDYEGCFHQPGKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKEL----GLQPRQV 127

Query: 63  KVWFQNRRCREKQR---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
            +WFQNRR R K +   K+   L+A   +L    + L++END+L+ +V+ L
Sbjct: 128 AIWFQNRRARFKTKQLEKDYGTLKASYDRLKGDYESLLQENDKLKAEVNSL 178


>gi|195638278|gb|ACG38607.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
          Length = 270

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 8/139 (5%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 132

Query: 77  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
           +   +  RL+A    L A ++ L+ +ND L+ QV  L  E    ++ + S T+A ++   
Sbjct: 133 QLETDYDRLKAAYNALAADHQGLLADNDSLRAQVICLT-EKLQGKETSLSATIAAQEVDQ 191

Query: 134 ESVVTSGQHHLTPQHPPRD 152
            +  T+G      Q    D
Sbjct: 192 PNEHTTGTEKXLAQQLKDD 210


>gi|356536039|ref|XP_003536548.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 751

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 89/383 (23%), Positives = 153/383 (39%), Gaps = 77/383 (20%)

Query: 210 CGLVGLEPTRVAEILKDRPRG-------SAILYALTTLAPARDFWLLRYTSVLEDGSLVV 262
           CG+V    T     + D  R        SA     + L P RD + +R++      S  V
Sbjct: 353 CGIVSRAVTHEVLSIGDHARYDGAYQVMSAEFQVPSPLVPTRDNYFIRFSKKHAGQSWAV 412

Query: 263 CERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLR 322
            + S+ +++ G          R    PSG +I+    G S +  V+H++++   V  + +
Sbjct: 413 VDISMDHLRPGAV-------TRTRRRPSGCIIQELPNGYSKVIWVEHVEVDDIEVHNLYK 465

Query: 323 PLYESSTVLAQKTTMAALRQL-----RQMAQEVTQSSV----NGWGRRPAALRALSQRLS 373
            L  S+     K  +AA+ +      R MA  + Q ++    +  GR+  ++  L++R+ 
Sbjct: 466 NLVNSTLAFGAKRWIAAIERTCEHLARAMATNIPQGALCVITSHEGRK--SMMKLAERMV 523

Query: 374 RGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKA 433
             F+  V   T   WT +  D +++V V+   S D             P   + ++ + A
Sbjct: 524 LSFSTGVGASTANAWTPLPLD-LENVRVMTRKSVDD------------PGRPSGIVLSAA 570

Query: 434 SMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLA 493
           + L   VP   +  FL   RSE   N  D+ S+                  G+QV   LA
Sbjct: 571 TSLWLPVPARRVFDFL---RSENTRNQWDILSS------------------GAQVN-ELA 608

Query: 494 HTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---- 549
           H  +  +    + L  V       +   +M +LQ  S +D     T + +++APID    
Sbjct: 609 HIAKGRDHGNSVSLLRVN---TQNVAQNNMLILQE-SCID----ATGSFVVYAPIDLASM 660

Query: 550 -----ASFADDAPLLPSGFRIIP 567
                    D   LLPSGF ++P
Sbjct: 661 NLVLGGGNPDYVALLPSGFAVLP 683



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 29/117 (24%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           ++ R+T  Q+  +E  + ECP P   +R+ L RE  ++    P QIK WFQN+R + K +
Sbjct: 77  RHTRHTLHQISEMEAFFKECPHPDEKQRKALGRELGLV----PLQIKFWFQNKRTQVKSQ 132

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
           +E              N LL  END+L+        EN  +R        A  +TSC
Sbjct: 133 QERYE-----------NNLLRVENDKLRA-------ENSRYRN-------ALSNTSC 164


>gi|22023157|gb|AAM88945.1|AF317882_1 transcription factor 1 [Oryza sativa]
          Length = 709

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 145/707 (20%), Positives = 250/707 (35%), Gaps = 180/707 (25%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--K 77
           R T +Q E LE  +  C  P   +++ L       + +   Q+K WFQN+R + K    K
Sbjct: 72  RLTGKQSEVLEGFFSICGHPDDGQKRHLSET----TGLGLDQVKFWFQNKRTQVKTMCWK 127

Query: 78  EASRLQAVNRKLTAMNKLLMEENDR---------------------LQKQVSQLVYENGY 116
           E       N KL+  N++L +EN R                     L  ++ +L+ ++ +
Sbjct: 128 EE------NYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEW 181

Query: 117 FRQHTQ-------STTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEF 169
            +Q          +  LA +  S    V SGQH               +  +A+  +   
Sbjct: 182 LQQEIARSNGTPPAANLAFQLNSSADYVFSGQH-----------DQQMIAELAKNAMHAL 230

Query: 170 LSKATGTAVEWVQMPGMK-------------PGPDSVGIVAISHGCSGVAARACGLVGLE 216
           +  A      W  +PG               PG +S   +    G    A RA  +V ++
Sbjct: 231 IILAESHVALWFPVPGCSYEVLNKMAYDQAYPGDNSANAI----GFKTEATRAVSMVMMD 286

Query: 217 PTRVAEILKDRPRGSAILY------ALTT---------------------------LAPA 243
              V + L D P      +      A+T                            L PA
Sbjct: 287 YKSVVDFLMD-PYNYRTFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPA 345

Query: 244 RDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSI 303
           R    LRY +VL +G +VV + SL    +G        F +   +PSG+LI+        
Sbjct: 346 RKCTFLRYCNVLNEGLVVVIDVSL---DDGSI------FSKCRKMPSGFLIQSIRPNSCK 396

Query: 304 IHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ---LRQMAQEVTQSSVNGWGR 360
           +  ++H+  +   V E+ +P        A++      RQ   +R +    T   V+  GR
Sbjct: 397 VTAIEHVLADDTGVHELYQPRVNGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTKGR 456

Query: 361 RPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVLVNSSPDKLMGLNLSFAN 419
           +   L  L+  L   F   +       WTV+   G + D+ V    + +           
Sbjct: 457 K--NLMKLADDLLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRRTTEG---------- 504

Query: 420 GFPAVSNAVLCAKASMLLQNVPPAILLRFLRE--HRSEWADNNIDVYSAAAIKVGPCSLP 477
              +  NA+L   AS+ L  +P       LR   HR +W     DV    ++     ++ 
Sbjct: 505 --SSSYNAILSVTASLRLP-LPMRKTFDLLRNLTHRCKW-----DVLVHGSVVKEEVTI- 555

Query: 478 GSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAV 537
              VG   +  +L        +    +I L+  G+    + M        + S +D   +
Sbjct: 556 ARGVGNDDTVTVLHCKRAGREDRGRTMI-LQNNGYDASGSFM--------VYSQIDSELM 606

Query: 538 GTCAELIFAPIDASFADDAP-LLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRA 596
            T   ++ +P D       P L P+GF ++P     + S         S + +G  G   
Sbjct: 607 NT---MVLSPSDLPPGRGGPSLYPTGFSLLPDVEAAQDS---------SGIALGEVGG-- 652

Query: 597 TNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQ 643
                       ++MT+ F+   +      +A+  R Y RS  S+++
Sbjct: 653 ------------TLMTMGFQIPVK------LASGDRMYSRSAASAIR 681


>gi|222636242|gb|EEE66374.1| hypothetical protein OsJ_22692 [Oryza sativa Japonica Group]
          Length = 91

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 36/44 (81%)

Query: 611 MTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNI 654
           MTIAF+FAFESH+Q  V  MA+QY+ SIISSVQR+A+ LS S +
Sbjct: 1   MTIAFQFAFESHLQGSVPAMAQQYMCSIISSVQRIAVVLSSSRL 44


>gi|225441050|ref|XP_002283931.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51 [Vitis
           vinifera]
 gi|297740036|emb|CBI30218.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           K+   +  K  R T EQ+E+LER + E  K    R+ +L RE      ++P+QI VWFQN
Sbjct: 52  KSSYGNQEKKKRLTNEQLESLERSFQEEIKLEPDRKMKLAREL----GLQPRQIAVWFQN 107

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHT--QSTTL 126
           RR R K  KE  RL  V   L     L+ +E  +LQ++VS+L    G  R+    +  ++
Sbjct: 108 RRARWKT-KELERLYDV---LKQEYDLMSKEKQKLQEEVSKL---KGILREQATRKQVSM 160

Query: 127 ATKDTSCESVVTSGQHHLTPQHPPRDAS 154
              + S E  V S    +   + PR  S
Sbjct: 161 GYTEVSGEETVESTSITIRSSNKPRGLS 188


>gi|213950361|gb|ACJ54445.1| GL2a [Brassica rapa]
          Length = 750

 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T +Q+  +E L+ E P P   +RQQL  +      + P+Q+K WFQNRR + K   
Sbjct: 100 YHRHTTDQIRHMEALFKETPHPDEKQRQQLSEQL----GLAPRQVKFWFQNRRTQIKAIQ 155

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L+A   KL   NK + E
Sbjct: 156 ERHENSLLKAELEKLREENKAMRE 179



 Score = 45.8 bits (107), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 26/248 (10%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           LT + P R+ + +R    L      + + S+ +++           +R    PSG +I  
Sbjct: 380 LTPVVPTREVYFVRSCRQLSPEKWAIVDVSV-SMEEDNNAEKEGSLLRCRKRPSGCIIED 438

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEV- 350
              G S +  V+H+DL   +V  + R    +      K  +A L     R +  MA  V 
Sbjct: 439 TSNGHSKVTWVEHLDLSASTVQPLFRSFVNTGLAFGAKHWVATLQLHCERLVFFMATNVP 498

Query: 351 TQSS--VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           T+ S  V     R + L+ ++QR+++ F  A+   +   W  +      D+ V   SS  
Sbjct: 499 TKDSLGVTTLAGRKSVLK-MAQRMTQSFYRAIAASSYHQWNKITTKTGQDMRV---SSRK 554

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWA--DNNIDVY 464
            L         G P  +  ++CA +S+ L  V P +L  F R+   R EW    N   V 
Sbjct: 555 NLHD------PGEP--TGVIVCASSSLWLP-VSPTLLFDFFRDETRRHEWDALSNGAHVQ 605

Query: 465 SAAAIKVG 472
           S  ++  G
Sbjct: 606 SIVSLSKG 613


>gi|413934246|gb|AFW68797.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 348

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 17/153 (11%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R + EQV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K ++  
Sbjct: 122 RLSVEQVRTLERSFEVANKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTKQLE 177

Query: 80  SRLQAVNRKLTAM---NKLLMEENDRLQKQVSQLVYENGYFRQHTQST--TLATKDT--S 132
               A+ R+L A    N  L+  N +LQ ++  L    G  RQ   S    L  K+T  S
Sbjct: 178 KDYDALRRQLDAARAENDALLSHNKKLQTEIMAL-KGGGGGRQEAASELINLNVKETEAS 236

Query: 133 C---ESVVTSGQHHLTPQHPPR--DASPAGLLS 160
           C    S   S + +L    PPR  D SPA + S
Sbjct: 237 CSNRSSDENSSEINLDISRPPRAADESPAAMDS 269


>gi|413922241|gb|AFW62173.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 154

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 63  KKRRLTAEQVQLLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 118

Query: 77  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
           +   +  RL+A    L A ++ L+ +ND L+ QV
Sbjct: 119 QLETDYDRLKAAYDALAADHQGLLADNDNLRAQV 152


>gi|8778268|gb|AAF79277.1|AC023279_26 F12K21.1 [Arabidopsis thaliana]
          Length = 164

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 7/87 (8%)

Query: 13 LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
          +D+     ++  QV+ LE  +HECP P   +R+QL  E     N++ KQIK WFQNRR +
Sbjct: 15 IDSNNRRHHSNHQVQRLEAFFHECPHPDDSQRRQLGNEL----NLKHKQIKFWFQNRRTQ 70

Query: 73 EKQRKEAS---RLQAVNRKLTAMNKLL 96
           +   E +    L+  N K+  +N+ +
Sbjct: 71 ARIHNEKADNIALRVENMKIRCVNEAM 97


>gi|224053723|ref|XP_002297947.1| predicted protein [Populus trichocarpa]
 gi|222845205|gb|EEE82752.1| predicted protein [Populus trichocarpa]
          Length = 196

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 13/137 (9%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 76
           R+T EQ++ LE ++    +P S  +QQL  E      +EP+Q+ +WFQNRR R K +   
Sbjct: 19  RFTDEQIKFLEFMFESESRPESRVKQQLASEL----GLEPRQVAIWFQNRRARLKTKQIE 74

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ----STTLATKDTS 132
           KE S L+A    L +  + L  E   L  Q+ +L  +N + +QH      +   +++D  
Sbjct: 75  KEYSILKASYDVLASSFESLKREKQSLIIQLHKL--KNRHVKQHGSRNCGNQLRSSRDGR 132

Query: 133 CESVVTSGQHHLTPQHP 149
            E+  T  +    P  P
Sbjct: 133 FENKDTGSESKEKPSSP 149


>gi|163860158|gb|ABY41242.1| homeodomain protein HOX1 [Gossypium arboreum]
          Length = 753

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 101 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 156

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L+    KL   NK + E
Sbjct: 157 ERHENSLLKQELEKLRDENKAMRE 180



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 99/434 (22%), Positives = 168/434 (38%), Gaps = 93/434 (21%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  LT L P R+ + +RY   L      + + S+  ++           V+    PSG
Sbjct: 381 AELQMLTPLVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDAS----LVKCRKRPSG 436

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ-----M 346
            +I+    G   +  V+H + +  +V  + R +  S      +  MA L+   +     M
Sbjct: 437 CIIQDTTNGHCKVIWVEHXECQKNTVHTLYRTIVRSGLAFGARHWMATLQHQCEGLFFFM 496

Query: 347 AQEVTQSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           A  V      G     GR+  ++  L+QR++  F  ++   +   W  +     +DV V 
Sbjct: 497 ATNVPTKDSTGVATLAGRK--SILKLAQRMTWSFCHSIGASSYHTWNKVSTKTGEDVRV- 553

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
             SS   L        N        ++CA +S+ L  V P +L  FLR+   RSEW    
Sbjct: 554 --SSRKNL--------NDPGEPHGVIVCAVSSVCLP-VSPTLLFDFLRDESRRSEW---- 598

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            D+ S      GP             Q I  LA   +    + +  ++   +S       
Sbjct: 599 -DIMSNG----GPV------------QSIANLAKGKDRGNAVTIQAMKSKENS------- 634

Query: 521 RDMFLLQ-LCSGMDENAVGTCAELIFAPIDASF---------ADDAPLLPSGFRIIPLDS 570
             M++LQ  C+   E+ V      +FA +D +          + +  +LPSGF I+P   
Sbjct: 635 --MWILQDSCTNAFESMV------VFAHVDVTGIQSVITGCDSSNMAILPSGFSILP--D 684

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
           G E+    R L ++S  E             +N T   S++T+AF+    S     +   
Sbjct: 685 GLES----RPLVISSRHE------------KSNDTEGGSLLTVAFQILTNSSPTAKLTME 728

Query: 631 ARQYVRSIISSVQR 644
           + + V +I+S   R
Sbjct: 729 SVESVNTIVSCTLR 742


>gi|22475195|gb|AAM97321.1| homeodomain protein GhHOX1 [Gossypium hirsutum]
          Length = 753

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 101 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 156

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L+    KL   NK + E
Sbjct: 157 ERHENSLLKQELDKLRDENKAMRE 180



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 99/434 (22%), Positives = 169/434 (38%), Gaps = 93/434 (21%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  LT L P R+ + +RY   L      + + S+  ++           V+    PSG
Sbjct: 381 AELQMLTPLVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDAS----LVKCRKRPSG 436

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQM 346
            +I+    G   +  V+H++ +  +V  + R +  S      +  MA L     R +  M
Sbjct: 437 CIIQDTTNGHCKVIWVEHLECQKNTVHTLYRTIVRSGLAFGARHWMATLQHQCERLVFFM 496

Query: 347 AQEVTQSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           A  V      G     GR+  ++  L+QR++  F  ++   +   W  +     +D+ V 
Sbjct: 497 ATNVPTKDSTGVATLAGRK--SILKLAQRMTWSFCHSIGASSYHTWNKVSTKTGEDIRV- 553

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
             SS   L        N        ++CA +S+ L  V P +L  FLR+   RSEW    
Sbjct: 554 --SSRKNL--------NDPGEPHGVIVCAVSSVWLP-VSPTLLFDFLRDESRRSEW---- 598

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            D+ S      GP             Q I  LA   +    + +  ++   +S       
Sbjct: 599 -DIMSNG----GPV------------QSIANLAKGKDRGNAVTIQAMKSKENS------- 634

Query: 521 RDMFLLQ-LCSGMDENAVGTCAELIFAPIDASF---------ADDAPLLPSGFRIIPLDS 570
             M++LQ  C+   E+ V      +FA +D +          + +  +LPSGF I+P   
Sbjct: 635 --MWVLQDSCTNAFESMV------VFAHVDVTGIQSVITGCDSSNMAILPSGFSILP--D 684

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
           G E+    R L ++S  E             +N T   S++T+AF+    S     +   
Sbjct: 685 GLES----RPLVISSRHE------------KSNDTEGGSLLTVAFQILTNSSPTAKLTME 728

Query: 631 ARQYVRSIISSVQR 644
           + + V +I+S   R
Sbjct: 729 SVESVNTIVSCTLR 742


>gi|168060572|ref|XP_001782269.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666282|gb|EDQ52941.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 328

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 20/156 (12%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +QV +LER +    K    R+ QL +E      + P+Q+ VWFQNRR R K +
Sbjct: 94  KKRRLTLDQVRSLERNFEVENKLEPDRKMQLAKEL----GMRPRQVAVWFQNRRARWKTK 149

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV-----YENGYFRQHTQSTTLAT 128
              ++   L+A  ++L A  +L+++E + L+ ++ +L      Y+ G   Q  +S+ +  
Sbjct: 150 QLERDYETLEAGFKRLKADYELVLDEKNYLKAELQRLSGDTLGYKQGDDNQGAESSKIPE 209

Query: 129 KDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEE 164
           +D    S+  + QH+         ASP    S+A+E
Sbjct: 210 RDLDV-SISVARQHNAR-------ASPTVDTSLAKE 237


>gi|345566896|gb|EGX49835.1| hypothetical protein AOL_s00076g633 [Arthrobotrys oligospora ATCC
           24927]
          Length = 615

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 4/55 (7%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 78
           EQ  ALERLY +CPKP+   ++ L        N+ P ++ +WFQNRR R K+ KE
Sbjct: 87  EQTLALERLYQQCPKPNQATKRDLAHAI----NLSPTRVNIWFQNRRHRAKKHKE 137


>gi|13346176|gb|AAK19610.1|AF336277_1 BNLGHi8377 [Gossypium hirsutum]
          Length = 758

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K   
Sbjct: 106 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKAIQ 161

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L+    KL   NK + E
Sbjct: 162 ERHENSLLKQELDKLRDENKAMRE 185



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 99/434 (22%), Positives = 169/434 (38%), Gaps = 93/434 (21%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  LT L P R+ + +RY   L      + + S+  ++           V+    PSG
Sbjct: 386 AELQMLTPLVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDAS----LVKCRKRPSG 441

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQM 346
            +I+    G   +  V+H++ +  +V  + R +  S      +  MA L     R +  M
Sbjct: 442 CIIQDKTNGHCKVIWVEHLECQKNTVHTLYRTIVRSGLAFGARHWMATLQHQCERLVFFM 501

Query: 347 AQEVTQSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           A  V      G     GR+  ++  L+QR++  F  ++   +   W  +     +D+ V 
Sbjct: 502 ATNVPTKDSTGVATLAGRK--SILKLAQRMTWSFCHSIGASSYHTWNKVSTKTGEDIRV- 558

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
             SS   L        N        ++CA +S+ L  V P +L  FLR+   RSEW    
Sbjct: 559 --SSRKNL--------NDPGEPHGVIVCAVSSVWLP-VSPTLLFDFLRDESRRSEW---- 603

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            D+ S      GP             Q I  LA   +    + +  ++   +S       
Sbjct: 604 -DIMSNG----GPV------------QSIANLAKGKDQGNAVTIQAMKSKENS------- 639

Query: 521 RDMFLLQ-LCSGMDENAVGTCAELIFAPIDASF---------ADDAPLLPSGFRIIPLDS 570
             M++LQ  C+   E+ V      +FA +D +          + +  +LPSGF I+P   
Sbjct: 640 --MWVLQDSCTNAFESMV------VFAHVDVTGIQSVITGCDSSNMAILPSGFSILP--D 689

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
           G E+    R L ++S  E             +N T   S++T+AF+    S     +   
Sbjct: 690 GLES----RPLVISSRHE------------KSNDTEGGSLLTVAFQILTNSSPTAKLTME 733

Query: 631 ARQYVRSIISSVQR 644
           + + V +I+S   R
Sbjct: 734 SVESVNTIVSCTLR 747


>gi|356522256|ref|XP_003529763.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 751

 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T EQ+  +E L+ E P P   +RQQL  +      + P+Q+K WFQNRR + K   
Sbjct: 97  YHRHTAEQIREMEALFKESPHPDEKQRQQLSNQL----GLAPRQVKFWFQNRRTQIKAIQ 152

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L+    +L   NK + E
Sbjct: 153 ERHENSLLKTELDRLREENKAMRE 176



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 75/354 (21%), Positives = 145/354 (40%), Gaps = 68/354 (19%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  LT + P R+ + +R    L D    + + S+  +++          V+    PSG
Sbjct: 379 AELQMLTPMVPTREVYFVRCGKQLSDEQWAIVDVSIDKVEDNIDAS----LVKCRKRPSG 434

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQM 346
            +I     G   +  V+H++ +  ++  + R +  S      +  +  L     R +  M
Sbjct: 435 CIIEDKSNGHCKVIWVEHLECQKSTIHTMYRTIVNSGLAFGARHWIETLQLQCERLVFYM 494

Query: 347 AQEVTQSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           A  V      G     GR+  ++  L+QR++  F  AV   +   WT + +   +D+ + 
Sbjct: 495 ATNVPMKDSTGVATLAGRK--SILKLAQRMTWSFCHAVGASSFHTWTKVTSKTGEDIRIS 552

Query: 403 VNSS---PDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWA 457
              +   P + +G+              +LCA +S+ L  V P +L  FLR+   R+EW 
Sbjct: 553 SRKNLNEPGEPLGV--------------ILCAVSSVWLP-VSPNVLFDFLRDEARRNEW- 596

Query: 458 DNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA 517
               D+ S+           GS         +  +A+  + ++   V+ ++ +  S +++
Sbjct: 597 ----DIMSSG----------GS---------VQSIANLAKGKDRGNVVNIQKIIQSKDNS 633

Query: 518 IMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASF----ADDAPLLPSGFRIIP 567
           +      L   C+   E+ V   A + FA I +      + +  +LPSGF I+P
Sbjct: 634 V----WILQDSCTSAYESTV-VYAPVEFAGIQSVLTGCDSSNLAILPSGFSILP 682


>gi|302761652|ref|XP_002964248.1| hypothetical protein SELMODRAFT_81609 [Selaginella moellendorffii]
 gi|302815769|ref|XP_002989565.1| hypothetical protein SELMODRAFT_129907 [Selaginella moellendorffii]
 gi|300142743|gb|EFJ09441.1| hypothetical protein SELMODRAFT_129907 [Selaginella moellendorffii]
 gi|300167977|gb|EFJ34581.1| hypothetical protein SELMODRAFT_81609 [Selaginella moellendorffii]
          Length = 127

 Score = 57.4 bits (137), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 7/99 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + +QV++LER + +  K    R+ QL +E     +++P+Q+ VWFQNRR R K +
Sbjct: 25  KKRRLSVDQVKSLERHFEQDNKLEPERKLQLAKEL----SLQPRQVAVWFQNRRARWKTK 80

Query: 77  KEASRLQAVNRKLTAMN---KLLMEENDRLQKQVSQLVY 112
           +      A+   L A+    K L++E   L+ +V Q+ +
Sbjct: 81  QLEKDYDALKENLDALRGDYKSLLKEKQELEAEVCQIFF 119


>gi|22299007|ref|NP_682254.1| hypothetical protein tll1464 [Thermosynechococcus elongatus BP-1]
 gi|22295189|dbj|BAC09016.1| tll1464 [Thermosynechococcus elongatus BP-1]
          Length = 154

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 67/155 (43%), Gaps = 6/155 (3%)

Query: 663 PLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFT 722
           P   P AL  AR IC S++ + G  LL   +E   S+ + L++ +  V+    +A P+  
Sbjct: 3   PWLQPAALQQARRICVSFQRWTGRSLLPYPAEDDCSLGQQLFYWSQPVLSHGSEADPILN 62

Query: 723 FANQAGLDMLET---TLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSS 779
           + NQA L + E      V L      +      R AL A   Q  +QG+A    GI +S 
Sbjct: 63  YGNQAALTLWEYPWLNWVRLPSRFTAEPMAQAERAALLA---QADRQGYADNYSGIRISR 119

Query: 780 MGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            GR    E A  W VL+E          F  W F+
Sbjct: 120 TGRRFRIENACIWTVLDEAGNRVGQAATFDQWHFL 154


>gi|356512547|ref|XP_003524980.1| PREDICTED: uncharacterized protein LOC100799054 [Glycine max]
          Length = 331

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 17/141 (12%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R +  QV+ LE+ + E  K    R+ +L ++      ++P+Q+ +WFQNRR R K +
Sbjct: 83  KKRRLSASQVQFLEKSFEEENKLEPERKTKLAKDL----GLQPRQVAIWFQNRRARWKNK 138

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL---VYENGYFRQHTQSTTLATKD 130
              K+   L A    L +    L++E D+L+ +V+ L   V   G    H        K 
Sbjct: 139 QLEKDYETLHASFESLKSNYDCLLKEKDKLKAEVASLTEKVLARGKQEGH-------MKQ 191

Query: 131 TSCESVVTSGQHHLTPQHPPR 151
              ES  T G  HL  Q PP+
Sbjct: 192 AESESEETKGLLHLQEQEPPQ 212


>gi|356498166|ref|XP_003517924.1| PREDICTED: uncharacterized protein LOC100783970 [Glycine max]
          Length = 345

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 9/131 (6%)

Query: 16  GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 75
           GK  R T EQV+ LER +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 85  GKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKEL----GLQPRQVAIWFQNRRARFKT 140

Query: 76  R---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           +   K+   L+A   +L    + L++END+L+ +V+ L  E+    +  +    +   +S
Sbjct: 141 KQLEKDYGVLKASYDRLKGDYESLVQENDKLKAEVNSL--ESKLILRDKEKEENSDDKSS 198

Query: 133 CESVVTSGQHH 143
            +  V S  H+
Sbjct: 199 PDDAVNSSPHN 209


>gi|125549829|gb|EAY95651.1| hypothetical protein OsI_17516 [Oryza sativa Indica Group]
          Length = 162

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 4/61 (6%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K +
Sbjct: 104 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKVK 159

Query: 77  K 77
           K
Sbjct: 160 K 160


>gi|15218724|ref|NP_174724.1| homeobox-leucine zipper protein HDG10 [Arabidopsis thaliana]
 gi|75199883|sp|Q9S9Z0.1|HDG10_ARATH RecName: Full=Homeobox-leucine zipper protein HDG10; AltName:
          Full=HD-ZIP protein HDG10; AltName: Full=Homeodomain
          GLABRA 2-like protein 10; AltName: Full=Homeodomain
          transcription factor HDG10; AltName: Full=Protein
          HOMEODOMAIN GLABROUS 10
 gi|5668786|gb|AAD46012.1|AC007894_10 Similar to gb|Z54356 HD-ZIP protein (Athb-10) from Arabidopsis
          thaliana and contains a PF|00046 homeobox domain
          [Arabidopsis thaliana]
 gi|332193611|gb|AEE31732.1| homeobox-leucine zipper protein HDG10 [Arabidopsis thaliana]
          Length = 708

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 7/87 (8%)

Query: 13 LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
          +D+     ++  QV+ LE  +HECP P   +R+QL  E     N++ KQIK WFQNRR +
Sbjct: 15 IDSNNRRHHSNHQVQRLEAFFHECPHPDDSQRRQLGNEL----NLKHKQIKFWFQNRRTQ 70

Query: 73 EKQRKEASR---LQAVNRKLTAMNKLL 96
           +   E +    L+  N K+  +N+ +
Sbjct: 71 ARIHNEKADNIALRVENMKIRCVNEAM 97


>gi|3925363|gb|AAC79430.1| homeodomain protein [Malus x domestica]
          Length = 653

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 145/356 (40%), Gaps = 70/356 (19%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+     +G   V + S+  I++   +P    F+    LPSG
Sbjct: 268 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDAIRDTTGVPT---FMNCRTLPSG 324

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ-----M 346
            +++    G S +  V+H + +   V  + RPL  S      +  ++ L++  +     M
Sbjct: 325 CVVQDMPNGYSKVTWVEHAEYDESQVHHLYRPLLSSGMGFGAQRWVSTLQRQSECQAILM 384

Query: 347 AQEVT---QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVL 402
           +  VT    +++   GRR  ++  L+QR++  F   V   T   WT +    +D DV V+
Sbjct: 385 SSCVTSRDHTAITASGRR--SMLKLAQRMTDNFCAGVCASTVHKWTKLNAGNVDEDVRVM 442

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
              S        L      P V   VL A  S+ L    P  L  FLR+   RSEW    
Sbjct: 443 TRES--------LYHPGEPPGV---VLSAATSVWLP-FSPQRLFDFLRDERLRSEW---- 486

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            D+ S      GP               +  +AH  + ++    + L     +     M 
Sbjct: 487 -DILSNG----GP---------------MQEMAHIAKGQDPGNCVSLLRARANANQGSM- 525

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIP 567
             + L + C     +A G+   +++AP+D        +  D A   LLPSGF I+P
Sbjct: 526 --LILQETCI----DAAGSL--VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP 573


>gi|414867890|tpg|DAA46447.1| TPA: outer cell layer4 [Zea mays]
          Length = 731

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 8/86 (9%)

Query: 29  LERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRK 88
           +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +++    +A N  
Sbjct: 1   MEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQQD----RADNVL 52

Query: 89  LTAMNKLLMEENDRLQKQVSQLVYEN 114
           L A N+ L  +N RLQ  +  +V  N
Sbjct: 53  LRAENESLKSDNYRLQAAIRNVVCPN 78


>gi|357464079|ref|XP_003602321.1| Homeobox-leucine zipper protein ATHB-7 [Medicago truncatula]
 gi|355491369|gb|AES72572.1| Homeobox-leucine zipper protein ATHB-7 [Medicago truncatula]
          Length = 244

 Score = 56.6 bits (135), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 77
           R++ EQ+ +LE ++    K    ++ QL R+      ++P+Q+ +WFQNRR R K ++  
Sbjct: 40  RFSDEQIRSLECIFESESKLEPRKKMQLARDL----GLQPRQVAIWFQNRRARWKSKRIE 95

Query: 78  -EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 112
            E  +L+     L +  + L EE + LQ +V +L Y
Sbjct: 96  QEYRKLKDEYDNLASKFQCLKEEKESLQSEVQKLSY 131


>gi|414867888|tpg|DAA46445.1| TPA: outer cell layer4 isoform 1 [Zea mays]
 gi|414867889|tpg|DAA46446.1| TPA: outer cell layer4 isoform 2 [Zea mays]
          Length = 746

 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 8/84 (9%)

Query: 31  RLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLT 90
           RL+ ECP P   +R +L +E      ++P+Q+K WFQNRR + K +++    +A N  L 
Sbjct: 18  RLFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRRTQMKAQQD----RADNVLLR 69

Query: 91  AMNKLLMEENDRLQKQVSQLVYEN 114
           A N+ L  +N RLQ  +  +V  N
Sbjct: 70  AENESLKSDNYRLQAAIRNVVCPN 93


>gi|312283295|dbj|BAJ34513.1| unnamed protein product [Thellungiella halophila]
          Length = 120

 Score = 56.2 bits (134), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQ++ LE+ +    K  S R+ +L R       ++P+QI +WFQNRR
Sbjct: 22  GSKMGEKKRRLNMEQLKTLEKNFEIGNKLESDRKLELARAL----GLQPRQIAIWFQNRR 77

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 107
            R K ++      A+ R+  ++   N++L  +N +LQ QV
Sbjct: 78  ARSKTKQLERDYDALKRQFESLKDENEILQTQNQKLQAQV 117


>gi|357131009|ref|XP_003567136.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ROC9-like [Brachypodium distachyon]
          Length = 758

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T EQV  +E ++ E P P   +RQQL  +      + P+Q+K WFQNRR + K   
Sbjct: 89  YHRHTAEQVRVMEAVFKESPHPDEKQRQQLSEQL----GLSPRQVKFWFQNRRTQIKAIQ 144

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L++    +   N+ + E
Sbjct: 145 ERHENSLLKSELENVQKENRAMRE 168


>gi|297850974|ref|XP_002893368.1| ATHB23 [Arabidopsis lyrata subsp. lyrata]
 gi|297339210|gb|EFH69627.1| ATHB23 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQ++ALE+ +    K  S R+ +L R       ++P+QI +WFQNRR
Sbjct: 65  GSKMGEKKRRLNMEQLKALEKNFELGNKLESDRKLELARAL----GLQPRQIAIWFQNRR 120

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
            R K ++       + R+  ++   N++L  +N +LQ QV  L
Sbjct: 121 ARSKTKQLEKDYDMLKRQFESLRNENEVLQTQNQKLQAQVMAL 163


>gi|297606515|ref|NP_001058601.2| Os06g0719900 [Oryza sativa Japonica Group]
 gi|255677401|dbj|BAF20515.2| Os06g0719900 [Oryza sativa Japonica Group]
          Length = 93

 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 39/65 (60%), Gaps = 4/65 (6%)

Query: 210 CGLVGLEPTRVAEILKDRPRGSAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKN 269
           CG    +P    EI K +   S  LYA TTLAPA DFWLLRYTS+L DGSLVV    ++ 
Sbjct: 12  CGKFLAQP----EIPKLKSVFSLQLYAPTTLAPAHDFWLLRYTSILGDGSLVVSCLIMER 67

Query: 270 IQNGP 274
             N P
Sbjct: 68  KTNYP 72


>gi|357448567|ref|XP_003594559.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355483607|gb|AES64810.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 699

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 114/558 (20%), Positives = 203/558 (36%), Gaps = 147/558 (26%)

Query: 14  DNGK---YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           D+G+   + R T  Q   L+    EC  P    R QL  E      +EPKQIK WFQN+R
Sbjct: 21  DDGEKSSHKRLTSAQTSILKNFMKECHHPDEAERHQLAVEV----GLEPKQIKFWFQNKR 76

Query: 71  CREKQ----------RKEASRLQAVNRKLTAMNKL----------------------LME 98
              K           R+E  +++  N K+  + K                       L +
Sbjct: 77  TLLKHQHERETNGTLRRENDKIRNENLKIKEVLKAKICLDCGGPPFPMKDHQNFVQDLKQ 136

Query: 99  ENDRLQKQVSQLV----------YENGYFRQHTQSTTLATKDTSCESVV----------- 137
           EN +L+++  ++                F Q  +S    ++D  C S V           
Sbjct: 137 ENAQLKQECEKMSSLLASYMEKKISRPEFEQALKSIKSFSRDYECSSHVHGNLATWGGVL 196

Query: 138 --TSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPG------ 189
             TS Q++        DA    +  + +  + E +         WV+ P  + G      
Sbjct: 197 GQTSTQNY--------DAQKITMSQVVDAAMDELVRLVRVNEPFWVKSPNTQDGYTFHRE 248

Query: 190 ---------------------PDSVGIVAISH-GCSGVAARACGLVGLEPT--------R 219
                                    G+V IS     G+   +     L PT        +
Sbjct: 249 SYEQVFPKNNHFKGANVCEESSKYSGLVKISGIDLVGMFLDSVKWTNLFPTIVTKAETIK 308

Query: 220 VAEILKDRPRGSAIL------YALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNG 273
           V EI     R  A+L      + L+ L   R+F ++RY    + G  V+ + S  + +  
Sbjct: 309 VFEIGSPGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKFDAGVWVIADVSFDSSR-- 366

Query: 274 PTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLE-PWSVPEVLRPLYESSTVLA 332
           P   P+    R    PSG +IR    GG ++  V+H+++E       V R L  +  +  
Sbjct: 367 PNTAPLS---RGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYVYRDLVGNYNLYG 423

Query: 333 QKTTMAALRQL---------RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGF 383
            ++ +  L+++           +  E T   +     R + ++ L+QR+ + F E++   
Sbjct: 424 AESWIKELQRMCERSLGSYVEAIPVEETIGVIQTLEGRNSVIK-LAQRMVKMFCESL--- 479

Query: 384 TDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSF---ANGFPAVSNAVLCAKASMLLQNV 440
                T+ G   ++ +T+        + G+ +SF    +   +  N  +   A+ L   +
Sbjct: 480 -----TMPGQLELNHLTLA------SIGGIRVSFRSTTDDDTSQPNGTIVTAATTLWLPL 528

Query: 441 PPAILLRFLRE--HRSEW 456
           P   +  FL++   RS+W
Sbjct: 529 PALKVFEFLKDPTKRSQW 546


>gi|18396130|ref|NP_564268.1| homeobox-leucine zipper protein ATHB-23 [Arabidopsis thaliana]
 gi|75155843|sp|Q8LFD3.1|ATB23_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-23; AltName:
           Full=HD-ZIP protein ATHB-23; AltName: Full=Homeodomain
           transcription factor ATHB-23
 gi|21537134|gb|AAM61475.1| putative DNA-binding protein [Arabidopsis thaliana]
 gi|32815953|gb|AAP88361.1| At1g26960 [Arabidopsis thaliana]
 gi|110736089|dbj|BAF00017.1| putative DNA-binding protein [Arabidopsis thaliana]
 gi|332192643|gb|AEE30764.1| homeobox-leucine zipper protein ATHB-23 [Arabidopsis thaliana]
          Length = 255

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQ++ALE+ +    K  S R+ +L R       ++P+QI +WFQNRR
Sbjct: 65  GSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARAL----GLQPRQIAIWFQNRR 120

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
            R K ++       + R+  ++   N++L  +N +LQ QV  L
Sbjct: 121 ARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMAL 163


>gi|351727955|ref|NP_001238458.1| homeodomain-leucine zipper protein 57 [Glycine max]
 gi|6018089|gb|AAF01765.1|AF184278_1 homeodomain-leucine zipper protein 57 [Glycine max]
          Length = 288

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 17/166 (10%)

Query: 16  GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 75
           GK  R T EQV+ LER +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 28  GKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKEL----GLQPRQVAIWFQNRRARFKT 83

Query: 76  R---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           +   K+   L+A   +L +  + L++END+L+ +V+ L  E+    +  +    +   +S
Sbjct: 84  KQLEKDYGVLKASYDRLKSDYESLVQENDKLKAEVNSL--ESKLILRDKEKEENSDDKSS 141

Query: 133 CESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAV 178
            +  V S   H        +  P  LL I++   T   S+  GT V
Sbjct: 142 PDDAVNSSSPH-------NNKEPMDLLIISKNATTTTTSE-NGTKV 179


>gi|220908687|ref|YP_002483998.1| MEKHLA domain-containing protein [Cyanothece sp. PCC 7425]
 gi|219865298|gb|ACL45637.1| MEKHLA domain protein [Cyanothece sp. PCC 7425]
          Length = 156

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 8/155 (5%)

Query: 663 PLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFT 722
           P   P  L  ++W+C S++ +LG  L++  S   E++ + L+     V+   ++A P+  
Sbjct: 7   PWQHPALLQHSQWLCQSFQHWLGYPLVEPHS--PETLAQTLYETPFVVLSHGIEADPILN 64

Query: 723 FANQAGLDMLE---TTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSS 779
           + N+A L++ +   +T   +      ++     R+ L     Q  +QGF     G+ ++ 
Sbjct: 65  YGNRAALELWQMDWSTFTQMPSRLTAEVPQREEREQLLQ---QAARQGFISNYRGVRIAG 121

Query: 780 MGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            G+    E A+ W VLN E        MF  W ++
Sbjct: 122 SGQRFLIEDAIIWNVLNAEGQKWGQAAMFKTWQWL 156


>gi|334188232|ref|NP_199499.3| homeobox-leucine zipper protein HDG5 [Arabidopsis thaliana]
 gi|322510124|sp|Q9FJS2.3|HDG5_ARATH RecName: Full=Homeobox-leucine zipper protein HDG5; AltName:
           Full=HD-ZIP protein HDG5; AltName: Full=Homeodomain
           GLABRA 2-like protein 5; AltName: Full=Homeodomain
           transcription factor HDG5; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 5
 gi|332008060|gb|AED95443.1| homeobox-leucine zipper protein HDG5 [Arabidopsis thaliana]
          Length = 826

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E L+ E P P   +R++L  E      ++P+Q+K WFQNRR + K +
Sbjct: 114 RYHRHTNRQIQEMEALFKENPHPDDKQRKRLSAEL----GLKPRQVKFWFQNRRTQMKAQ 169

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
           ++ +     N  L A N  L  EN  LQ ++
Sbjct: 170 QDRNE----NVMLRAENDNLKSENCHLQAEL 196



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 9/177 (5%)

Query: 232 AILYALTTLAPARDFWLLRYTSV-LEDGSLVVCERSLKNIQNGPTMPPVQHFVRA-EMLP 289
           A L  L+ L P R+ + LRY     E G+  + +  + +  +   M P+       +  P
Sbjct: 441 AELQVLSPLVPTREAYFLRYVEQNAETGNWAIVDFPIDSFHD--QMQPMNTITHEYKRKP 498

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ--- 345
           SG +I+    G S +  V+H++++   V E      +S         +  L RQ  +   
Sbjct: 499 SGCIIQDMPNGYSQVKWVEHVEVDEKHVHETFAEYVKSGMAFGANRWLDVLQRQCERIAS 558

Query: 346 -MAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
            MA+ +T   V         +  LSQRL + F   ++    + WT +     D V +
Sbjct: 559 LMARNITDLGVISSAEARRNIMRLSQRLVKTFCVNISTAYGQSWTALSETTKDTVRI 615


>gi|125527992|gb|EAY76106.1| hypothetical protein OsI_04032 [Oryza sativa Indica Group]
          Length = 736

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 90/422 (21%), Positives = 150/422 (35%), Gaps = 115/422 (27%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--K 77
           R T +Q E LE  +  C  P   +++ L       + +   Q+K WFQN+R + K    K
Sbjct: 72  RLTGKQSEVLEGFFSICGHPDDGQKRHLSET----TGLGLDQVKFWFQNKRTQVKTMCWK 127

Query: 78  EASRLQAVNRKLTAMNKLLMEENDR---------------------LQKQVSQLVYENGY 116
           E       N KL+  N++L +EN R                     L  ++ +L+ ++ +
Sbjct: 128 EE------NYKLSVENEILRDENRRVKIAHCTAICLTCRNSSVQNQLAVEMERLMGQSEW 181

Query: 117 FRQHTQ-------STTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEF 169
            +Q          +  LA +  S    V SGQH               +  +A+  +   
Sbjct: 182 LQQEIARSNGTPPAANLAFQLNSSADYVFSGQH-----------DQQMIAELAKNAMHAL 230

Query: 170 LSKATGTAVEWVQMPG--------------MKPGPDSVGIVAISHGCSGVAARACGLVGL 215
           +  A      W  +PG                PG +S   +    G    A RA  +V +
Sbjct: 231 IILAESHVALWFPVPGCAYEVLNKMMAYDQAYPGDNSANAI----GFKTEATRAVSMVMM 286

Query: 216 EPTRVAEILKDRPRGSAILY------ALTT---------------------------LAP 242
           +   V + L D P      +      A+T                            L P
Sbjct: 287 DYKSVVDFLMD-PYNYRTFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVP 345

Query: 243 ARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGS 302
           AR    LRY +VL +G +VV + SL    +G        F +   +PSG+LI+       
Sbjct: 346 ARKCTFLRYCNVLNEGLVVVIDVSL---DDGSI------FSKCRKMPSGFLIQSIRPNSC 396

Query: 303 IIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ---LRQMAQEVTQSSVNGWG 359
            +  ++H+  +   V E+ +P        A++      RQ   +R +    T   V+  G
Sbjct: 397 KVTAIEHVLADDTGVHELYQPCMNGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTKG 456

Query: 360 RR 361
           R+
Sbjct: 457 RK 458


>gi|9759430|dbj|BAB10227.1| homeobox protein [Arabidopsis thaliana]
          Length = 783

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E L+ E P P   +R++L  E      ++P+Q+K WFQNRR + K +
Sbjct: 114 RYHRHTNRQIQEMEALFKENPHPDDKQRKRLSAEL----GLKPRQVKFWFQNRRTQMKAQ 169

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
           ++ +     N  L A N  L  EN  LQ ++
Sbjct: 170 QDRNE----NVMLRAENDNLKSENCHLQAEL 196


>gi|356528926|ref|XP_003533048.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 748

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T EQ+  +E L+ E P P   +RQ+L ++      + P+Q+K WFQNRR + K   
Sbjct: 96  YHRHTTEQIREMEALFKESPHPDEKQRQKLSQQL----GLAPRQVKFWFQNRRTQIKALQ 151

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L+    KL    K + E
Sbjct: 152 ERHENSLLKTELDKLREETKAMRE 175



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 75/352 (21%), Positives = 138/352 (39%), Gaps = 65/352 (18%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  LT + P R+ + +R    L D    + + S+  +++          V+    PSG
Sbjct: 377 AELQMLTPMVPTREVYFVRCCKQLSDEQWAIVDVSIDKVEDNIDAS----LVKCRKRPSG 432

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQM 346
            +I     G   +  V+H++ +  ++  + R +  S      +  +A L     R +  M
Sbjct: 433 CIIEDKSNGHCKVIWVEHLECQKSTIHTMYRTIVNSGLAFGARHWIATLQLHCERLVFYM 492

Query: 347 AQEVTQSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           A  V      G     GR+  ++  L+QR++  F  A+   +   WT++ +   +D+ + 
Sbjct: 493 ATNVPMKDSTGVATLAGRK--SILKLAQRMTWSFCHAIGASSFHTWTMVTSKTGEDIRI- 549

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNN 460
             SS   L           P     V+ +  S +   V   +L  FLR+   RSEW    
Sbjct: 550 --SSRKNLND---------PGEPLGVILSAVSSVWLPVSTNVLFDFLRDEARRSEW---- 594

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
            D+ S+                    Q +  LA   +    + + K++   +S       
Sbjct: 595 -DIMSSGG----------------SVQSVANLAKGKDRGNVVNIQKIQSKDNS------- 630

Query: 521 RDMFLLQ-LCSGMDENAVGTCAELIFAPIDASF----ADDAPLLPSGFRIIP 567
             +++LQ  C+   E+ V   A + FA I +      + +  +LPSGF I+P
Sbjct: 631 --VWILQDSCTSAYESMV-VYAPVEFAGIQSVLTGCDSSNLAILPSGFSILP 679


>gi|356558073|ref|XP_003547333.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 713

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 18/103 (17%)

Query: 7   DGKTGSLDNGK---YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           D  + + + G+   Y R T  Q   LER   +CP P   +R+QL  E      +E KQ+K
Sbjct: 13  DEGSDNFNQGRRPSYKRLTSAQTARLERFIKDCPHPDEAQRRQLASEI----GLETKQVK 68

Query: 64  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQ 106
            WFQN+R + K + E            A N  L  ENDR+  +
Sbjct: 69  FWFQNKRTQIKNQHE-----------RADNTALRVENDRIHSK 100


>gi|224059096|ref|XP_002299713.1| predicted protein [Populus trichocarpa]
 gi|222846971|gb|EEE84518.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 22  TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR 81
           T EQ+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNRR + K R  A +
Sbjct: 110 TAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKARTLAIQ 165

Query: 82  LQAVNRKLTAMNKLLMEENDRLQKQVSQ 109
            +  N  L +    L E+N  +++ +++
Sbjct: 166 ERHENSLLKSEMDKLREDNKSMRETINK 193



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 141/352 (40%), Gaps = 75/352 (21%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           LT + P R+ + +RY   L      + + S+  +++          V+    PSG +I  
Sbjct: 395 LTPMVPTREVYFVRYCKQLNAEQWAIVDVSIDKVEDNIDA----SLVKCRKRPSGCIIED 450

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEVT 351
              G   +  V+H+  +  +V  + R +  S      +  MA L     R +  MA  V 
Sbjct: 451 KSNGHCKVIWVEHLQCQKSTVHTMYRTVVHSGLTFGARHWMATLQLQCERLVFFMATNVP 510

Query: 352 QSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
                G     GR+  ++  L+QR++  F  A+   +   W  + +   +D+ V   SS 
Sbjct: 511 TKDSTGVATLAGRK--SILKLAQRMTWSFCRAICASSYHTWNKVSSKTGEDIRV---SSR 565

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYS 465
             L         G P     +LCA +S+ L  V P IL  FLR+   R+EW     D+ S
Sbjct: 566 KNLND------PGEPV--GVILCAVSSVWLP-VVPHILFDFLRDEARRNEW-----DIMS 611

Query: 466 AAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFL 525
                 GP             Q I  L    +      ++K++    S E+     +M++
Sbjct: 612 NG----GPV------------QTIANLIKGQDRGNAAAILKMK----SKEN-----NMWV 646

Query: 526 LQ-LCSGMDENAVGTCAELIFAPIDASF---------ADDAPLLPSGFRIIP 567
           LQ  C+   E+ +      ++AP+D +          + +  +LPSGF I+P
Sbjct: 647 LQDSCTNAYESMI------VYAPVDTNGMQSVITGCDSSNLAILPSGFSILP 692


>gi|357487803|ref|XP_003614189.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
 gi|355515524|gb|AES97147.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
          Length = 373

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 16/89 (17%)

Query: 17  KYVR-YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 75
           +Y R +TP Q+E LE ++ ECPKP+  ++ QL +E  +       QI+ WFQN+R + K 
Sbjct: 36  RYRRPHTPNQLERLEEVFKECPKPNEKQKLQLSKELALSYG----QIRFWFQNKRTQTKA 91

Query: 76  RKEASRLQAVNRKLTAMNKLLMEENDRLQ 104
           + E +            N+LL  END+++
Sbjct: 92  KLERND-----------NRLLRAENDKIR 109


>gi|53792431|dbj|BAD53269.1| putative transcription factor 1 [Oryza sativa Japonica Group]
 gi|56784273|dbj|BAD81955.1| putative transcription factor 1 [Oryza sativa Japonica Group]
          Length = 629

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 107/510 (20%), Positives = 179/510 (35%), Gaps = 132/510 (25%)

Query: 29  LERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--KEASRLQAVN 86
           + R +  C  P   +++ L       + +   Q+K WFQN+R + K    KE       N
Sbjct: 1   MNRFFSICGHPDDGQKRHLSET----TGLGLDQVKFWFQNKRTQVKTMCWKEE------N 50

Query: 87  RKLTAMNKLLMEENDR---------------------LQKQVSQLVYENGYFRQHTQ--- 122
            KL+  N++L +EN R                     L  ++ +L+ ++ + +Q      
Sbjct: 51  YKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQEIARSN 110

Query: 123 ----STTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAV 178
               +  LA +  S    V SGQH               +  +A+  +   +  A     
Sbjct: 111 GTPPAANLAFQLNSSADYVFSGQH-----------DQQMIAELAKNAMHALIILAESHVA 159

Query: 179 EWVQMPGMK-------------PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILK 225
            W  +PG               PG +S   +    G    A RA  +V ++   V + L 
Sbjct: 160 LWFPVPGCSYEVLNKMAYDQAYPGDNSANAI----GFKTEATRAVSMVMMDYKSVVDFLM 215

Query: 226 DRPRGSAILY------ALTT---------------------------LAPARDFWLLRYT 252
           D P      +      A+T                            L PAR    LRY 
Sbjct: 216 D-PYNYRTFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYC 274

Query: 253 SVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDL 312
           +VL +G +VV + SL    +G        F +   +PSG+LI+        +  ++H+  
Sbjct: 275 NVLNEGLVVVIDVSL---DDGSI------FSKCRKMPSGFLIQSIRPNSCKVTAIEHVLA 325

Query: 313 EPWSVPEVLRPLYESSTVLAQKTTMAALRQ---LRQMAQEVTQSSVNGWGRRPAALRALS 369
           +   V E+ +P        A++      RQ   +R +    T   V+  GR+   L  L+
Sbjct: 326 DDTGVHELYQPCMNGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTKGRK--NLMKLA 383

Query: 370 QRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVLVNSSPDKLMGLNLSFANGFPAVSNAV 428
             L   F   +       WTV+   G + D+ V    + +              +  NA+
Sbjct: 384 DDLLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRRTTEG------------SSSYNAI 431

Query: 429 LCAKASMLLQNVPPAILLRFLRE--HRSEW 456
           L   AS+ L  +P       LR   HR +W
Sbjct: 432 LSVTASLRLP-LPMRKTFDLLRNLTHRCKW 460


>gi|357153545|ref|XP_003576486.1| PREDICTED: homeobox-leucine zipper protein HOX25-like [Brachypodium
           distachyon]
          Length = 296

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 8/98 (8%)

Query: 20  RYTPEQVEALERLYHECPKP-SSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR-- 76
           R T EQV ALER + E  +     R+ +L R       + P+Q+ VWFQNRR R K +  
Sbjct: 89  RLTAEQVRALERSFEEEKRKLEPERKSELARRL----GMAPRQVAVWFQNRRARWKAKQL 144

Query: 77  -KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 113
            ++   L+A +  L A    L+ +ND L+ QV  L  E
Sbjct: 145 ERDFDALRAAHDHLLASRDALLADNDSLRSQVISLTEE 182


>gi|187609463|sp|A3BYC1.2|HOX25_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX25; AltName:
           Full=HD-ZIP protein HOX25; AltName: Full=Homeodomain
           transcription factor HOX25; AltName: Full=OsHox25
          Length = 320

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 8/105 (7%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECP-KPSSIRRQQLIRECPILSNIEPKQIKVW 65
           D +  S    +  R T EQV ALER + E   K    R+ +L R       I P+Q+ VW
Sbjct: 72  DEQGSSSAAARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVW 127

Query: 66  FQNRRCREKQRK---EASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
           FQNRR R K ++   +  RL+A + +L A    L  +N+ L+ QV
Sbjct: 128 FQNRRARWKTKQLELDFDRLRAAHDELLAGRTALAADNESLRSQV 172


>gi|356574388|ref|XP_003555330.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 729

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 147/357 (41%), Gaps = 76/357 (21%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           SA     + L P RD + +R+    +  S  V + S+ +++ G          +    PS
Sbjct: 360 SAEFQVPSPLVPTRDNYFIRFCKKHQGQSWAVVDFSMDHLRPGA-------ITKIRRRPS 412

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQ 345
           G +I+    G S +  V+H++++   V  + + L +S+     K  +AA+     R    
Sbjct: 413 GCIIQELPNGYSKVIWVEHVEVDDSEVHNLYKNLVDSTLAFGAKRWVAAIDRTCERLASA 472

Query: 346 MAQEVTQSS---VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVL 402
           MA  + Q +   +     R + ++ L++R+   F   V   T   WT + + G++DV V+
Sbjct: 473 MATNIPQGALCVITSHESRKSMMK-LAERMVLSFCTGVGASTANAWTPLPS-GLEDVRVM 530

Query: 403 VNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNID 462
              S D             P     ++ + A+ L   VP   +  FL   RSE   N  D
Sbjct: 531 TRKSVDD------------PGRPPGIVLSAATSLWLPVPARRVFEFL---RSENTRNQWD 575

Query: 463 VYSAAAIKVGPCSLPGSRVGTFGSQV--ILPLAHTIEHEEFMEVIKL--EGVGHSPEDAI 518
           + S                   G+QV  +  +A+  +H   + ++++  + VG +     
Sbjct: 576 ILST------------------GAQVNELAHIANGRDHGNCVSLLRVNTQNVGQN----- 612

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFA---------DDAPLLPSGFRII 566
              +M +LQ  S +D     T + +I+APID +           D   LLPSGF ++
Sbjct: 613 ---NMLILQE-SFID----ATGSFVIYAPIDVAAINVVLGGGNPDYVALLPSGFAVL 661



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 7/73 (9%)

Query: 25  QVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR---EKQRKEASR 81
           Q+  +E  +  CP P   +R+ L RE      +EP QIK WFQN+R +   +++R E + 
Sbjct: 56  QISEMESFFKGCPHPDEKQRKALGREL----GLEPLQIKFWFQNKRTQVKTQQERYENNL 111

Query: 82  LQAVNRKLTAMNK 94
           L+  N KL A N+
Sbjct: 112 LRVENDKLRAENR 124


>gi|357486581|ref|XP_003613578.1| Homeobox-leucine zipper protein ATHB-16 [Medicago truncatula]
 gi|355514913|gb|AES96536.1| Homeobox-leucine zipper protein ATHB-16 [Medicago truncatula]
          Length = 324

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 16  GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 75
           GK  R + EQV+ LE+ +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 86  GKKRRLSSEQVQFLEKSFEVENKLEPDRKVQLAKEL----GLQPRQVAIWFQNRRARFKT 141

Query: 76  R---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           +   K+   L+A    L      L++END+L+++V+ L
Sbjct: 142 KQLEKDYGTLKASFDSLKDDYDNLLQENDKLKEEVNSL 179


>gi|356532435|ref|XP_003534778.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 714

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 8/85 (9%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R +  Q   LER   +CP P   +R+QL  E      +E KQIK WFQN+R + K   
Sbjct: 24  YKRLSSAQTARLERFIKDCPHPDEAQRRQLASEI----GLETKQIKFWFQNKRTQIKNQH 79

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEE 99
           +R + + L+  N ++   N LLM+E
Sbjct: 80  ERADNTALRVENDRIHTEN-LLMKE 103


>gi|218189094|gb|EEC71521.1| hypothetical protein OsI_03822 [Oryza sativa Indica Group]
          Length = 759

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 94/442 (21%), Positives = 159/442 (35%), Gaps = 81/442 (18%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
           Y R+T EQ+  +E L+ E P P   +RQQ ++E    S ++ +  K+  ++R  RE  +K
Sbjct: 99  YHRHTAEQIRIMEALFKESPHPDERQRQQAVQERHENSLLKSELEKLQDEHRAMRELAKK 158

Query: 78  EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV- 136
            +   + +N  + A +   +        +  +L  EN   +   +        ++ + V 
Sbjct: 159 PS---RCLNCGVVATSSDAVAAATAADTREQRLRLENAKLKAEIERLRGTPGKSAADGVA 215

Query: 137 -----VTSGQHHLTPQHPP----------RDASPAGLLSIAEETLTEFLSKATGTAVEWV 181
                 ++G      + PP           D     +L +A   L E +   +     WV
Sbjct: 216 SPPCSASAGAMQTNSRSPPLHDHDGGFLRHDDDKPRILELATRALDELVGMCSSGEPVWV 275

Query: 182 QMPGMKPGPD------SVGIVAISHGCSG--------VAARACGLVGLE----------- 216
           +  G++ G D       V +    HG SG         A+R CGLV L+           
Sbjct: 276 R--GVETGRDILNYDEYVRLFRRDHGGSGDQMAGWTVEASRECGLVYLDTMQLVHTFMDV 333

Query: 217 -------PTRVA-----EILKDRPRGS---------AILYALTTLAPARDFWLLRYTSVL 255
                  PT ++     E++ +R             A L  LT + P R+ +  RY   L
Sbjct: 334 DKWKDLFPTMISKAATLEMISNREDDGRDGVLQLMYAELQTLTPMVPTRELYFARYCKKL 393

Query: 256 EDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPW 315
                 + + S    + G         VR    PSG LI     G   +  V+H      
Sbjct: 394 AAERWAIVDVSFDESETGVH---ASSAVRCWKNPSGCLIEEQNNGRCKMTWVEHTRCRRC 450

Query: 316 SVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEVTQSSVNG----WGRRPAALR 366
           +V  + R +  S      +  +AAL     R +  +A  V      G     GRR  ++ 
Sbjct: 451 TVAPLYRAVTASGVAFGARRWVAALQLQCERMVFAVATNVPTRDSTGVSTLAGRR--SVL 508

Query: 367 ALSQRLSRGFNEAVNGFTDEGW 388
            L+ R++        G  D  W
Sbjct: 509 KLAHRMTSSLCRTTGGSRDMAW 530


>gi|449439053|ref|XP_004137302.1| PREDICTED: homeobox-leucine zipper protein ATHB-7-like [Cucumis
           sativus]
          Length = 208

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 6/99 (6%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R++ EQ++ LE +Y+     S +  +Q+I+    L  ++P+QI +WFQN+R R K +++ 
Sbjct: 5   RFSDEQIKTLEAIYYL--TESKLNSRQVIKLATKLG-LQPQQITIWFQNKRARWKSKEKQ 61

Query: 80  SRLQAVNRK---LTAMNKLLMEENDRLQKQVSQLVYENG 115
              +++  K   L +  + L EEN+ L  Q+ +L    G
Sbjct: 62  ENFKSLRAKCDDLASQFETLQEENNSLLSQLQKLTVLQG 100


>gi|297726893|ref|NP_001175810.1| Os09g0379600 [Oryza sativa Japonica Group]
 gi|255678854|dbj|BAH94538.1| Os09g0379600 [Oryza sativa Japonica Group]
          Length = 286

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 8/105 (7%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECP-KPSSIRRQQLIRECPILSNIEPKQIKVW 65
           D +  S    +  R T EQV ALER + E   K    R+ +L R       I P+Q+ VW
Sbjct: 38  DEQGSSSAAARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVW 93

Query: 66  FQNRRCREKQRK---EASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
           FQNRR R K ++   +  RL+A + +L A    L  +N+ L+ QV
Sbjct: 94  FQNRRARWKTKQLELDFDRLRAAHDELLAGRTALAADNESLRSQV 138


>gi|449440459|ref|XP_004138002.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Cucumis sativus]
          Length = 240

 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 10/100 (10%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           G+L+  K  R + EQ+E+LER + E  K    R+Q+L +E      ++P+QI VWFQNRR
Sbjct: 62  GNLEKKK--RLSSEQLESLERSFQEEIKLDPDRKQKLSKEL----GLQPRQIAVWFQNRR 115

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
            R K ++       + ++  A+++    E  +LQ++V +L
Sbjct: 116 ARWKAKQLEHLYDTLKQEFDAISR----EKHKLQEEVMKL 151


>gi|75303608|sp|Q8S7W9.1|HOX21_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX21; AltName:
           Full=HD-ZIP protein HOX21; AltName: Full=Homeodomain
           transcription factor HOX21; AltName: Full=OsHox21
 gi|19071644|gb|AAL84311.1|AC073556_28 putative DNA-binding protein [Oryza sativa Japonica Group]
 gi|108706412|gb|ABF94207.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|108706413|gb|ABF94208.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 366

 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR
Sbjct: 124 GSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRR 179

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
            R K ++      A+ R+L A+   N  L+  N +LQ ++  L
Sbjct: 180 ARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVAL 222


>gi|326516084|dbj|BAJ88065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 296

 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 20  RYTPEQVEALERLYHECP-KPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR-- 76
           R T EQV ALER + E   K    R+ +L R       I P+Q+ VWFQNRR R K +  
Sbjct: 82  RLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWKAKQL 137

Query: 77  -KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
            ++   L+A + +L A    L+ +N  L+ QV+ L 
Sbjct: 138 EQDFDALRAAHAELLAGRDALLADNHHLRSQVTSLT 173


>gi|449521341|ref|XP_004167688.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like,
           partial [Cucumis sativus]
          Length = 230

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 10/100 (10%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           G+L+  K  R + EQ+E+LER + E  K    R+Q+L +E      ++P+QI VWFQNRR
Sbjct: 62  GNLEKKK--RLSSEQLESLERSFQEEIKLDPDRKQKLSKEL----GLQPRQIAVWFQNRR 115

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
            R K ++       + ++  A+++    E  +LQ++V +L
Sbjct: 116 ARWKAKQLEHLYDTLKQEFDAISR----EKHKLQEEVMKL 151


>gi|125572285|gb|EAZ13800.1| hypothetical protein OsJ_03723 [Oryza sativa Japonica Group]
          Length = 679

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 140/696 (20%), Positives = 244/696 (35%), Gaps = 180/696 (25%)

Query: 31  RLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--KEASRLQAVNRK 88
           R +  C  P   +++ L       + +   Q+K WFQN+R + K    KE       N K
Sbjct: 27  RFFSICGHPDDGQKRHLSET----TGLGLDQVKFWFQNKRTQVKTMCWKEE------NYK 76

Query: 89  LTAMNKLLMEENDR---------------------LQKQVSQLVYENGYFRQHTQ----- 122
           L+  N++L +EN R                     L  ++ +L+ ++ + +Q        
Sbjct: 77  LSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQEIARSNGT 136

Query: 123 --STTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
             +  LA +  S    V SGQH               +  +A+  +   +  A      W
Sbjct: 137 PPAANLAFQLNSSADYVFSGQH-----------DQQMIAELAKNAMHALIILAESHVALW 185

Query: 181 VQMPGMK-------------PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR 227
             +PG               PG +S   +    G    A RA  +V ++   V + L D 
Sbjct: 186 FPVPGCSYEVLNKMAYDQAYPGDNSANAI----GFKTEATRAVSMVMMDYKSVVDFLMD- 240

Query: 228 PRGSAILY------ALTT---------------------------LAPARDFWLLRYTSV 254
           P      +      A+T                            L PAR    LRY +V
Sbjct: 241 PYNYRTFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNV 300

Query: 255 LEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEP 314
           L +G +VV + SL    +G        F +   +PSG+LI+        +  ++H+  + 
Sbjct: 301 LNEGLVVVIDVSL---DDGSI------FSKCRKMPSGFLIQSIRPNSCKVTAIEHVLADD 351

Query: 315 WSVPEVLRPLYESSTVLAQKTTMAALRQ---LRQMAQEVTQSSVNGWGRRPAALRALSQR 371
             V E+ +P        A++      RQ   +R +    T   V+  GR+   L  L+  
Sbjct: 352 TGVHELYQPCMNGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTKGRK--NLMKLADD 409

Query: 372 LSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLC 430
           L   F   +       WTV+   G + D+ V    + +              +  NA+L 
Sbjct: 410 LLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRRTTEG------------SSSYNAILS 457

Query: 431 AKASMLLQNVPPAILLRFLRE--HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQV 488
             AS+ L  +P       LR   HR +W     DV    ++     ++    VG   +  
Sbjct: 458 VTASLRLP-LPMRKTFDLLRNLTHRCKW-----DVLVHGSVVKEEVTI-ARGVGNDDTVT 510

Query: 489 ILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPI 548
           +L        +    +I L+  G+    + M        + S +D   + T   ++ +P 
Sbjct: 511 VLHCKRAGREDRGRTMI-LQNNGYDASGSFM--------VYSQIDSELMNT---MVLSPS 558

Query: 549 DASFADDAP-LLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCM 607
           D       P L P+GF ++P     + S         S + +G  G              
Sbjct: 559 DLPPGRGGPSLYPTGFSLLPDVEAAQDS---------SGIALGEVGG------------- 596

Query: 608 RSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQ 643
            ++MT+ F+   +      +A+  R Y RS  S+++
Sbjct: 597 -TLMTMGFQIPVK------LASGDRMYSRSAASAIR 625


>gi|449461919|ref|XP_004148689.1| PREDICTED: homeobox-leucine zipper protein HAT7-like [Cucumis
           sativus]
          Length = 305

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 24/134 (17%)

Query: 5   CKD--GKTGSLDNG-----KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNI 57
           C+D  G  G  D+G     K  R   EQV+ALE+ +    K    R+ QL +       +
Sbjct: 64  CEDVNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFEVGNKLEPERKMQLAKAL----GL 119

Query: 58  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYF 117
           +P+QI +WFQNRR R K ++     + + ++  A    L  +ND LQ Q ++L       
Sbjct: 120 QPRQIAIWFQNRRARWKTKQLERDYEVLKKQFEA----LKADNDVLQAQNTKL------- 168

Query: 118 RQHTQSTTLATKDT 131
             H +   L TKD+
Sbjct: 169 --HAELLALKTKDS 180


>gi|226528244|ref|NP_001151416.1| homeobox-leucine zipper protein HAT7 [Zea mays]
 gi|195646650|gb|ACG42793.1| homeobox-leucine zipper protein HAT7 [Zea mays]
          Length = 360

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R + +QV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K ++  
Sbjct: 132 RXSVDQVRTLERSFEVANKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTKQLE 187

Query: 80  SRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
               A+ R+L A    N  L+  N +LQ ++  L
Sbjct: 188 KDYDALRRQLDAARAENDALLSHNKKLQAEIMAL 221


>gi|414871481|tpg|DAA50038.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 363

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R + +QV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K ++  
Sbjct: 135 RLSVDQVRTLERSFEVANKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTKQLE 190

Query: 80  SRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
               A+ R+L A    N  L+  N +LQ ++  L
Sbjct: 191 KDYDALRRQLDAARAENDALLSHNKKLQAEIMAL 224


>gi|187609454|sp|A2XD08.2|HOX21_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX21; AltName:
           Full=HD-ZIP protein HOX21; AltName: Full=Homeodomain
           transcription factor HOX21; AltName: Full=OsHox21
          Length = 360

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR
Sbjct: 118 GSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRR 173

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
            R K ++      A+ R+L A+   N  L+  N +LQ ++  L
Sbjct: 174 ARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVAL 216


>gi|108706411|gb|ABF94206.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 356

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR
Sbjct: 114 GSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRR 169

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
            R K ++      A+ R+L A+   N  L+  N +LQ ++  L
Sbjct: 170 ARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVAL 212


>gi|357533773|gb|AET82940.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533775|gb|AET82941.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533777|gb|AET82942.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533779|gb|AET82943.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533781|gb|AET82944.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533783|gb|AET82945.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533785|gb|AET82946.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533787|gb|AET82947.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533789|gb|AET82948.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533791|gb|AET82949.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533793|gb|AET82950.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533795|gb|AET82951.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533797|gb|AET82952.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533799|gb|AET82953.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533801|gb|AET82954.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533805|gb|AET82956.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533807|gb|AET82957.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533809|gb|AET82958.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533811|gb|AET82959.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533813|gb|AET82960.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533815|gb|AET82961.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533817|gb|AET82962.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533819|gb|AET82963.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533821|gb|AET82964.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533823|gb|AET82965.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533825|gb|AET82966.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533827|gb|AET82967.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533829|gb|AET82968.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533831|gb|AET82969.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533833|gb|AET82970.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533835|gb|AET82971.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533837|gb|AET82972.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533839|gb|AET82973.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533841|gb|AET82974.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533843|gb|AET82975.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533845|gb|AET82976.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533847|gb|AET82977.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533849|gb|AET82978.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533851|gb|AET82979.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533853|gb|AET82980.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533857|gb|AET82982.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533859|gb|AET82983.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533861|gb|AET82984.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533863|gb|AET82985.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533865|gb|AET82986.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533867|gb|AET82987.1| hypothetical protein, partial [Pinus contorta var. murrayana]
 gi|357533869|gb|AET82988.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533871|gb|AET82989.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533875|gb|AET82991.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533877|gb|AET82992.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533879|gb|AET82993.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533883|gb|AET82995.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533885|gb|AET82996.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533887|gb|AET82997.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533889|gb|AET82998.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533891|gb|AET82999.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533893|gb|AET83000.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533895|gb|AET83001.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533897|gb|AET83002.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533899|gb|AET83003.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533903|gb|AET83005.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533905|gb|AET83006.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533907|gb|AET83007.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533909|gb|AET83008.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533911|gb|AET83009.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533913|gb|AET83010.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533915|gb|AET83011.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533917|gb|AET83012.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533919|gb|AET83013.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533921|gb|AET83014.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533923|gb|AET83015.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533925|gb|AET83016.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533927|gb|AET83017.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533929|gb|AET83018.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533931|gb|AET83019.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533933|gb|AET83020.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533935|gb|AET83021.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533937|gb|AET83022.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533939|gb|AET83023.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533941|gb|AET83024.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533943|gb|AET83025.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533945|gb|AET83026.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533947|gb|AET83027.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533949|gb|AET83028.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533951|gb|AET83029.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533953|gb|AET83030.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533955|gb|AET83031.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533957|gb|AET83032.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533959|gb|AET83033.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533961|gb|AET83034.1| hypothetical protein, partial [Pinus contorta var. murrayana]
          Length = 146

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)

Query: 6   KDGKTGSLDNG-KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 64
           +DG    +  G K  R T EQV ALE+ +    K    ++ QL +       ++P+QI V
Sbjct: 22  EDGSDDCIHLGEKKRRLTLEQVRALEKNFEMANKLEPEKKMQLAKAL----GLQPRQIAV 77

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNK---LLMEENDRLQKQVSQL 110
           WFQNRR R K ++       +     ++ +    LMEEN+ LQ  + +L
Sbjct: 78  WFQNRRARWKTKQLEKDFNILKHDYDSLKQNYDNLMEENNNLQAMIERL 126


>gi|326531178|dbj|BAK04940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 34/243 (13%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI---QNGPTMPPVQHFVRAEML 288
           A L  L+ L P R+   LR+   L +G+  V + S+  +   QN  T     +  +   L
Sbjct: 81  AELQVLSPLVPIREVIFLRFCKQLAEGAWAVVDVSIDGLLSNQNSATTSAGANL-KCRRL 139

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG +++    G   +  V+H + +  SV +  RPL  S         +A L RQ   +A
Sbjct: 140 PSGCVMQDTPNGYCKVTWVEHTEYDEASVHQFYRPLLRSGLAFGASRWLATLQRQCECLA 199

Query: 348 QEVT--------QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM----GNDG 395
             ++        Q++++  GRR  ++  L++R++  F   V+  +   W+ +    G+ G
Sbjct: 200 ILMSSATASPNEQTAISQEGRR--SMLKLARRMTENFCAGVSASSAREWSKLDGATGSIG 257

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--R 453
            +DV V+   S  +            P     V+ + A+ +   + P  L  FLR+   R
Sbjct: 258 -EDVRVMARKSVSE------------PGEPPGVVLSAATSVWVPIAPEKLFDFLRDEQLR 304

Query: 454 SEW 456
           +EW
Sbjct: 305 AEW 307


>gi|209171581|gb|ACI42911.1| tendril-less [Pisum sativum]
 gi|209171583|gb|ACI42912.1| tendril-less [Pisum sativum]
          Length = 237

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 26/112 (23%)

Query: 7   DGKTGSLDNGKYVR-----------YTPEQVEALERLYHECPKPSSIRRQQLIRECPILS 55
           D +T  ++NGK  R            T  QV+ALER +HE  K    R+ +L  E     
Sbjct: 52  DDETNKINNGKDYREKKKTKNKKNKLTSNQVDALERSFHEEIKLDPERKMKLSAEL---- 107

Query: 56  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
            ++P+Q+ VWFQNRR R K            ++L     +L +EN +LQ++V
Sbjct: 108 GLQPRQVAVWFQNRRTRWK-----------TKQLEHSYDVLKQENQKLQEEV 148


>gi|242039759|ref|XP_002467274.1| hypothetical protein SORBIDRAFT_01g022420 [Sorghum bicolor]
 gi|241921128|gb|EER94272.1| hypothetical protein SORBIDRAFT_01g022420 [Sorghum bicolor]
          Length = 362

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R + EQV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K ++  
Sbjct: 124 RLSVEQVRTLERSFEVANKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTKQLE 179

Query: 80  SRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
               A+ R+L A    N  L+  N +LQ ++  L
Sbjct: 180 KDYDALRRQLDAARAENDTLLSHNKKLQAEIMAL 213


>gi|302398865|gb|ADL36727.1| HD domain class transcription factor [Malus x domestica]
          Length = 393

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 14/186 (7%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R+   LR+     +G   V + S+  I++   +P    F+    LPSG
Sbjct: 180 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDAIRDTTGVPT---FMNCRRLPSG 236

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ-----M 346
            +++    G S +  V+H + +   V  + RPL  S      +  +A L++  +     M
Sbjct: 237 CVVQDMPNGYSKVTWVEHAEYDESQVHHLYRPLLSSGMGFGAQRWVATLQRQSECQAILM 296

Query: 347 AQEVT---QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTVL 402
           +  VT    +++   GRR  ++  L+QR++  F   V   T   WT +    +D DV V+
Sbjct: 297 SSCVTSRDHTAITASGRR--SMLKLAQRMTDNFCAGVCASTVHKWTKLNAGNVDEDVRVM 354

Query: 403 VNSSPD 408
              S D
Sbjct: 355 TRESLD 360


>gi|209171589|gb|ACI42915.1| tendril-less [Vicia narbonensis]
          Length = 237

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 15/89 (16%)

Query: 22  TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR 81
           T  QV+ALER +HE  K    R+ +L  E      ++P+Q+ VWFQNRR R K       
Sbjct: 78  TSNQVDALERSFHEEIKLDPERKMKLSAEL----GLQPRQVAVWFQNRRTRWK------- 126

Query: 82  LQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
                ++L     +L +EN +LQ +V +L
Sbjct: 127 ----TKQLEQSYDVLKQENQKLQDEVMEL 151


>gi|125574728|gb|EAZ16012.1| hypothetical protein OsJ_31457 [Oryza sativa Japonica Group]
          Length = 351

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + EQV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 104 KKRRLSVEQVRTLERSFESGNKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTK 159

Query: 77  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
           +      A+ R+L A    N  L+  N +L  ++  L
Sbjct: 160 QLEKDFDALRRQLDAARAENDALLSLNSKLHAEIVAL 196


>gi|449519629|ref|XP_004166837.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 738

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 7/82 (8%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QR 76
           R+T EQ+  +E L+ E P P   +RQQL  +      +  KQIK WFQNRR + K   +R
Sbjct: 88  RHTSEQIREMEMLFKESPHPDEKQRQQLSEKL----GLSCKQIKFWFQNRRTQIKAIHER 143

Query: 77  KEASRLQAVNRKLTAMNKLLME 98
            E + L+    KL   N+ + E
Sbjct: 144 HENALLKGEMEKLREENQAMRE 165



 Score = 42.4 bits (98), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 92/238 (38%), Gaps = 33/238 (13%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  LT   P R+ + +R    L  G  VV + S+  + +           R    PSG
Sbjct: 367 AELQMLTPTIPPREIFFIRSCKQLSPGKWVVADVSIDKVGDHVDSSSS----RCRKRPSG 422

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALR-----QLRQM 346
            +I+    G   +  V+H +     +  + R +  S  +      M+ L+     Q+  M
Sbjct: 423 CIIQDQSDGHCKVTWVEHWECHKIGLHTIYRTIVNSGLIFGATHWMSTLQMHCEWQVFFM 482

Query: 347 AQEVTQSSVNGW---GRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           A  V      G    G R + LR L+QR++    +A+       WT + +   + + +  
Sbjct: 483 ATNVPMKDSTGITTVGGRKSVLR-LAQRMTSSIYQAIGASNSHTWTKVQSKIGETIRIAS 541

Query: 404 N---SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
                +P +  GL              +LCA AS+ L  V P +L  FL +   R EW
Sbjct: 542 RKNLKNPHEPTGL--------------ILCAVASIWLP-VSPKLLFEFLIDEARRPEW 584


>gi|149199255|ref|ZP_01876293.1| hypothetical protein LNTAR_04576 [Lentisphaera araneosa HTCC2155]
 gi|149137680|gb|EDM26095.1| hypothetical protein LNTAR_04576 [Lentisphaera araneosa HTCC2155]
          Length = 150

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 2/131 (1%)

Query: 668 EALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQA 727
           E+   A  I  SY   LG  LL+ +S  ++ +L+ ++    A++    +  P+F FANQ 
Sbjct: 6   ESRVQAELIFASYAKLLGKPLLELTS--TDDLLEKMYFADFAILSHGTQDDPIFNFANQF 63

Query: 728 GLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYE 787
            LD  E T + ++++      +   R+   A   ++ Q GF     G+ +SS G+    +
Sbjct: 64  ALDKFELTWLDMRNLPSRYSAEAPSREERKALLDRVTQYGFIDDYQGVRISSTGKRFLIK 123

Query: 788 RAVAWKVLNEE 798
           +AV W +++EE
Sbjct: 124 QAVVWNLVDEE 134


>gi|449448174|ref|XP_004141841.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 738

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 7/82 (8%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QR 76
           R+T EQ+  +E L+ E P P   +RQQL  +      +  KQIK WFQNRR + K   +R
Sbjct: 88  RHTSEQIREMEMLFKESPHPDEKQRQQLSEKL----GLSCKQIKFWFQNRRTQIKAIHER 143

Query: 77  KEASRLQAVNRKLTAMNKLLME 98
            E + L+    KL   N+ + E
Sbjct: 144 HENALLKGEMEKLREENQAMRE 165



 Score = 42.4 bits (98), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 92/238 (38%), Gaps = 33/238 (13%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  LT   P R+ + +R    L  G  VV + S+  + +           R    PSG
Sbjct: 367 AELQMLTPTIPPREIFFIRSCKQLSPGKWVVADVSIDKVGDHVDSSSS----RCRKRPSG 422

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALR-----QLRQM 346
            +I+    G   +  V+H +     +  + R +  S  +      M+ L+     Q+  M
Sbjct: 423 CIIQDQSDGHCKVTWVEHWECHKIGLHTIYRTIVNSGLIFGATHWMSTLQMHCEWQVFFM 482

Query: 347 AQEVTQSSVNGW---GRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           A  V      G    G R + LR L+QR++    +A+       WT + +   + + +  
Sbjct: 483 ATNVPMKDSTGITTVGGRKSVLR-LAQRMTSSIYQAIGASNSHTWTKVQSKIGETIRIAS 541

Query: 404 N---SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
                +P +  GL              +LCA AS+ L  V P +L  FL +   R EW
Sbjct: 542 RKNLKNPHEPTGL--------------ILCAVASIWLP-VSPKLLFEFLIDEARRPEW 584


>gi|449505859|ref|XP_004162588.1| PREDICTED: homeobox-leucine zipper protein HAT7-like [Cucumis
           sativus]
          Length = 305

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 24/134 (17%)

Query: 5   CKD--GKTGSLDNG-----KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNI 57
           C+D  G  G  D+G     K  R   EQV+ALE+ +    K    R+ QL +       +
Sbjct: 64  CEDVNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFEVGNKLEPERKMQLAKAL----GL 119

Query: 58  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYF 117
           +P+QI +WFQNRR R K ++     + + ++  A    L  +ND LQ Q ++L       
Sbjct: 120 QPRQIAIWFQNRRARWKTKQLERDYEVLKKQFEA----LKADNDVLQAQNTKL------- 168

Query: 118 RQHTQSTTLATKDT 131
             H +   L TKD+
Sbjct: 169 --HAELLALKTKDS 180


>gi|354492531|ref|XP_003508401.1| PREDICTED: rhox homeobox family member 2-like [Cricetulus griseus]
          Length = 179

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 13/102 (12%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           ++TPEQV  L+R++ E   P +++R++L      L N+E   +KVWF NRR + ++ ++A
Sbjct: 75  KFTPEQVVELDRVFEETHYPDALKRKKLAE----LINVEECTVKVWFNNRRAKLRKHQKA 130

Query: 80  ----SRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYF 117
               S   +++ + +   K+L E  + +   V Q    NG+F
Sbjct: 131 LIQKSTFPSIHNRFSM--KILKETKNVV---VLQEPLRNGFF 167


>gi|242036775|ref|XP_002465782.1| hypothetical protein SORBIDRAFT_01g045740 [Sorghum bicolor]
 gi|241919636|gb|EER92780.1| hypothetical protein SORBIDRAFT_01g045740 [Sorghum bicolor]
          Length = 355

 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 7/100 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR
Sbjct: 118 GSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKLQLARAL----GLQPRQVAIWFQNRR 173

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 107
            R K ++      A+ R+L A+   N  L+  N +LQ ++
Sbjct: 174 ARWKTKQLEKDYDALKRQLDAVKADNDALLSHNKKLQAEI 213


>gi|356570052|ref|XP_003553206.1| PREDICTED: uncharacterized protein LOC100804328 [Glycine max]
          Length = 324

 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 12/131 (9%)

Query: 16  GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 75
           GK  R T EQV+ L+  +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 80  GKTRRLTSEQVQFLQSNFEVENKLEPERKVQLAKEL----GMQPRQVAIWFQNRRARFKT 135

Query: 76  RK---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           ++   +   L+A    L      L++END+L+++V+ L   N    +  +     + DTS
Sbjct: 136 KQLETDYGMLKASYHVLKRDYDNLLQENDKLKEEVNSL---NRLIPREQEEQN--SDDTS 190

Query: 133 CESVVTSGQHH 143
           C++V +  + H
Sbjct: 191 CDTVNSRHKEH 201


>gi|238498468|ref|XP_002380469.1| homeobox  transcription factor, putative [Aspergillus flavus
           NRRL3357]
 gi|220693743|gb|EED50088.1| homeobox transcription factor, putative [Aspergillus flavus
           NRRL3357]
          Length = 710

 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 20/99 (20%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 77
           R T EQVE LE  +   PKPSS  ++QL  +     N+   ++  WFQNRR + KQ+K  
Sbjct: 71  RLTKEQVETLEAQFQAHPKPSSNVKRQLAAQT----NLSLPRVANWFQNRRAKAKQQKRQ 126

Query: 78  --------------EASRLQAVNRKLTAMNKLLMEENDR 102
                         EA+R++  N + +  N  + EE D+
Sbjct: 127 EEFERMQKAKTEAEEAARIKIENAEKSESNPDVKEETDK 165


>gi|388520429|gb|AFK48276.1| unknown [Medicago truncatula]
          Length = 218

 Score = 52.8 bits (125), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + EQV+ALE+ +    K    R+ QL +       ++P+Q+ +WFQNRR R K +
Sbjct: 96  KKKRLSLEQVKALEKSFEIGNKLEPERKMQLAKAL----GLQPRQVAIWFQNRRARWKTK 151

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL----VYENG 115
              KE   L+     L A N  L  +N++L  ++  L     +ENG
Sbjct: 152 QLEKEYEVLKKQFDSLKADNNTLKAQNNKLHAELQTLKKRDCFENG 197


>gi|391865387|gb|EIT74671.1| homeobox transcription factor, putative [Aspergillus oryzae 3.042]
          Length = 710

 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 20/99 (20%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 77
           R T EQVE LE  +   PKPSS  ++QL  +     N+   ++  WFQNRR + KQ+K  
Sbjct: 71  RLTKEQVETLEAQFQAHPKPSSNVKRQLAAQT----NLSLPRVANWFQNRRAKAKQQKRQ 126

Query: 78  --------------EASRLQAVNRKLTAMNKLLMEENDR 102
                         EA+R++  N + +  N  + EE D+
Sbjct: 127 EEFERMQKAKTEAEEAARIKIENAEKSESNPDVKEETDK 165


>gi|350537501|ref|NP_001234296.1| homeodomain leucine zipper protein [Solanum lycopersicum]
 gi|211853240|emb|CAP16664.1| homeodomain leucine zipper protein [Solanum lycopersicum]
          Length = 285

 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 66  KKRRLTPEQVHLLEKSFETENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 121

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++  +L++    L +    + ++ND+L+ +V  L+
Sbjct: 122 QLERDYDQLKSSYDSLLSDFDSVRKDNDKLKSEVVSLM 159


>gi|169781668|ref|XP_001825297.1| hypothetical protein AOR_1_602074 [Aspergillus oryzae RIB40]
 gi|83774039|dbj|BAE64164.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 710

 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 20/99 (20%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 77
           R T EQVE LE  +   PKPSS  ++QL  +     N+   ++  WFQNRR + KQ+K  
Sbjct: 71  RLTKEQVETLEAQFQAHPKPSSNVKRQLAAQT----NLSLPRVANWFQNRRAKAKQQKRQ 126

Query: 78  --------------EASRLQAVNRKLTAMNKLLMEENDR 102
                         EA+R++  N + +  N  + EE D+
Sbjct: 127 EEFERMQKAKTEAEEAARIKIENAEKSESNPDVKEETDK 165


>gi|224119128|ref|XP_002317992.1| predicted protein [Populus trichocarpa]
 gi|222858665|gb|EEE96212.1| predicted protein [Populus trichocarpa]
          Length = 268

 Score = 52.4 bits (124), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 20/140 (14%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +QV+ LER +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 40  KKRRLTVDQVQFLERSFEVENKLEPERKIQLAKDL----GLQPRQVAIWFQNRRARWKTK 95

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
              K+   LQ+    L A    L +E ++L+ +V+ L  E     +   S+ L+ KD   
Sbjct: 96  QLEKDYEVLQSSYNGLKADYDNLFKEKEKLKAEVNLLTNELLLKEKEKGSSELSDKDA-- 153

Query: 134 ESVVTSGQHHLTPQHPPRDA 153
                        Q PP+ A
Sbjct: 154 -----------LSQEPPKKA 162


>gi|315052996|ref|XP_003175872.1| hypothetical protein MGYG_03394 [Arthroderma gypseum CBS 118893]
 gi|311341187|gb|EFR00390.1| hypothetical protein MGYG_03394 [Arthroderma gypseum CBS 118893]
          Length = 717

 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 13/193 (6%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +++   ++  WFQNRR +
Sbjct: 61  VENLSRPRLTKEQVEILESQFQAHPKPNSNTKRQLA----LQTSLTLPRVANWFQNRRAK 116

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDT- 131
            KQ+K     +    K+ A  K +  E    ++Q S+   E     Q  +++     D  
Sbjct: 117 AKQQKRQEEFE----KMQAKEKAMAAEGAGSKQQSSESSDEQQKSEQDQKNSMPTPTDAR 172

Query: 132 -SCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGP 190
            +  S    G H L     P D  P     +            +    E +  P +K G 
Sbjct: 173 GTSSSCSEQGDHGL---QTPADEKPEPKFEVVRHHTEAKAEVQSSEPAELISSPSLKDGQ 229

Query: 191 DSVGIVAISHGCS 203
           +  G +A  H  +
Sbjct: 230 EMSGAIASVHNSA 242


>gi|308080696|ref|NP_001183865.1| uncharacterized protein LOC100502458 [Zea mays]
 gi|238015104|gb|ACR38587.1| unknown [Zea mays]
 gi|408690316|gb|AFU81618.1| HB-type transcription factor, partial [Zea mays subsp. mays]
 gi|413956877|gb|AFW89526.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 344

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 8/105 (7%)

Query: 7   DGKTGSLDNG-KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           DG   ++  G K  R   EQV  LE+ +    K  + R+ QL R       ++P+Q+ +W
Sbjct: 104 DGSLQAVGPGEKKRRLNVEQVRTLEKNFELGNKLEAERKLQLARAL----GLQPRQVAIW 159

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 107
           FQNRR R K ++      A+ R+L A+   N  L+  N +LQ ++
Sbjct: 160 FQNRRARWKTKQLEKDYDALRRQLDAVKADNDALLSHNKKLQAEI 204


>gi|297734030|emb|CBI15277.3| unnamed protein product [Vitis vinifera]
          Length = 263

 Score = 52.4 bits (124), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +QV+ LER +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 71  KKRRLTADQVQFLERNFEVENKLEPERKVQLAKDL----GLQPRQVAIWFQNRRARWKTK 126

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
              K+   LQA    L A  + L++E D L+ +V
Sbjct: 127 QLEKDFGALQASYNSLKAEYENLLKEKDELKTEV 160


>gi|224090483|ref|XP_002308994.1| predicted protein [Populus trichocarpa]
 gi|222854970|gb|EEE92517.1| predicted protein [Populus trichocarpa]
          Length = 214

 Score = 52.4 bits (124), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 15/134 (11%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R T +Q   LE  +   P  +  ++  L  +     N++P+Q++VWFQNRR R K +
Sbjct: 90  KKLRLTKDQSSYLEESFRRHPTLNPAKKHALAEQL----NLKPRQVEVWFQNRRARTKLK 145

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA------TKD 130
           +  +  + + +   +++     EN RL++++ +L  +    R  +  + LA      TK 
Sbjct: 146 QTEADCELLKKCCESLSN----ENRRLKRELQELRSQKTG-RSSSSHSQLAKDLGTITKC 200

Query: 131 TSCESVVTSGQHHL 144
            SCE   T+ Q+ +
Sbjct: 201 PSCEESTTTDQNKM 214


>gi|414585329|tpg|DAA35900.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 683

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 33/224 (14%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P RD + +RY     DG+  V + SL               ++    PSG LI+    
Sbjct: 285 LVPTRDSYFVRYCKQNADGTWAVVDVSLDT----------SSVLKCRRRPSGCLIQEMPN 334

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----MAQEVTQSS 354
           G S +  V+H++++  SV  + + L +S      +  +  L RQ  +    MA  +  S 
Sbjct: 335 GYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERLASVMASNIPTSD 394

Query: 355 V----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
           +    +  GR+  ++  L++R+   F   V       WT +   G DDV V+   S D  
Sbjct: 395 IGVITSTEGRK--SMLKLAERMVTSFCGGVTASAAHQWTTLSGSGADDVRVMTRKSVDD- 451

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
                      P     ++   A+     + P  +  FLR+  S
Sbjct: 452 -----------PGRPPGIVLNAATSFWLPITPKRVFDFLRDESS 484


>gi|356570812|ref|XP_003553578.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Glycine max]
          Length = 214

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 15/132 (11%)

Query: 12  SLDNG---KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           ++D G   K  R T  Q+E LER + E  K    R+ +L RE      ++P+QI VWFQN
Sbjct: 49  AMDRGNKEKKKRLTNNQIELLERSFQEEIKLDPERKMKLSREL----GLQPRQIAVWFQN 104

Query: 69  RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV----SQLVYENGYFRQHTQST 124
           RR R K    A +L+ +   L     ++  E  +LQ++V    + L  + GY+ Q     
Sbjct: 105 RRTRWK----AKQLEHLYDMLKHQYDVVSNEKQKLQEEVIKLKAMLSKQQGYWTQKFGGY 160

Query: 125 TLATKDTSCESV 136
           T  + + + ES 
Sbjct: 161 TEISGEETVEST 172


>gi|357533873|gb|AET82990.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533881|gb|AET82994.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
          Length = 146

 Score = 52.4 bits (124), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 8/109 (7%)

Query: 6   KDGKTGSLDNG-KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 64
           +DG    +  G K  R T EQV ALE  +    K    ++ QL +       ++P+QI V
Sbjct: 22  EDGSDDCIHLGEKKRRLTLEQVRALEENFEMANKLEPEKKMQLAKAL----GLQPRQIAV 77

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNK---LLMEENDRLQKQVSQL 110
           WFQNRR R K ++       +     ++ +    LMEEN+ LQ  + +L
Sbjct: 78  WFQNRRARWKTKQLEKDFNILKHDYDSLKQNYDNLMEENNNLQAMIERL 126


>gi|443711321|gb|ELU05149.1| hypothetical protein CAPTEDRAFT_228137 [Capitella teleta]
          Length = 506

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 5/61 (8%)

Query: 22  TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 80
           T +Q+EAL+R Y+E PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 280 TAKQLEALKRAYNESPKPARHVREQLSAE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 335

Query: 81  R 81
           R
Sbjct: 336 R 336


>gi|300709018|ref|XP_002996678.1| hypothetical protein NCER_100211 [Nosema ceranae BRL01]
 gi|239605997|gb|EEQ83007.1| hypothetical protein NCER_100211 [Nosema ceranae BRL01]
          Length = 169

 Score = 52.4 bits (124), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 4/60 (6%)

Query: 20 RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
          R T  Q++ LE+ +  CP+P S  R++L  +     ++ P+ ++VWFQNRR + K+++++
Sbjct: 35 RTTKAQLKVLEKTFENCPRPDSTMRKKLADQL----SMTPRSVQVWFQNRRAKVKKQQQS 90


>gi|259013450|ref|NP_001158468.1| ISL LIM homeobox 1 [Saccoglossus kowalevskii]
 gi|197320557|gb|ACH68440.1| islet homeobox protein [Saccoglossus kowalevskii]
          Length = 383

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 40/59 (67%), Gaps = 4/59 (6%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRL 82
           +Q+  L   Y+  P+P ++ ++QL      ++N+ P+ I+VWFQN+RC++K+R +A +L
Sbjct: 194 KQLHTLRTCYNANPRPDALMKEQLTE----MTNLSPRVIRVWFQNKRCKDKKRSQAMKL 248


>gi|359806041|ref|NP_001241177.1| uncharacterized protein LOC100793260 [Glycine max]
 gi|255635107|gb|ACU17911.1| unknown [Glycine max]
          Length = 251

 Score = 52.4 bits (124), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 9/105 (8%)

Query: 9   KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
           K+  ++N +  R++ EQ+ +LE ++    K    ++ QL R+      ++P+Q+ +WFQN
Sbjct: 31  KSKKIENKR--RFSDEQIRSLECIFESESKLEPRKKMQLARDL----GLQPRQVAIWFQN 84

Query: 69  RRCREKQRK---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           RR R K ++   E  +L+     L +  + L +E D LQ ++ +L
Sbjct: 85  RRARWKSKRIEQEYRKLKDEYDNLASRFESLKKEKDSLQLELQKL 129


>gi|223947725|gb|ACN27946.1| unknown [Zea mays]
          Length = 647

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 151/364 (41%), Gaps = 77/364 (21%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI---QNGPTMPPVQHFVRAEML 288
           A L  L+ L P R+   LR+   L +G+  V + S+  +    N  T     + +R   L
Sbjct: 273 AELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGN-IRCRRL 331

Query: 289 PSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA 347
           PSG +++    G   +  V++ + +  SV ++ RPL  S      +  +A L RQ   +A
Sbjct: 332 PSGCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLA 391

Query: 348 QEVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM----GNDG 395
             ++  +V+          G+R  ++  L++R++  F   V+  +   W+ +    G+ G
Sbjct: 392 ILMSPDTVSANDSSVITQEGKR--SMLKLARRMTENFCAGVSASSAREWSKLDGAAGSIG 449

Query: 396 MDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--R 453
            +DV V+   S D+            P     V+ + A+ +   V P  L  FLR+   R
Sbjct: 450 -EDVRVMARKSVDE------------PGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLR 496

Query: 454 SEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHS 513
           +EW     D+ S      GP             Q +  +A   EH   + +++   +  +
Sbjct: 497 AEW-----DILSNG----GPM------------QEMANIAKGQEHGNSVSLLRASAMSAN 535

Query: 514 PEDAIMPRDMFLLQ-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGF 563
                    M +LQ  C+    +A G+   +++AP+D            +    LLPSGF
Sbjct: 536 QS------SMLILQETCT----DASGSM--VVYAPVDIPAMQLVMNGGDSTYVALLPSGF 583

Query: 564 RIIP 567
            I+P
Sbjct: 584 AILP 587


>gi|356531808|ref|XP_003534468.1| PREDICTED: homeobox-leucine zipper protein HAT3-like [Glycine max]
          Length = 229

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 8/94 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R T EQ   LE  + E    +  R+Q L  E     N++P+Q++VWFQNRR R K +
Sbjct: 69  KKLRLTKEQSMVLEETFKEHSTLNPKRKQALAEEL----NLKPRQVEVWFQNRRARTKLK 124

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           +     + + R      + L EEN RL K+V +L
Sbjct: 125 QTEVDCEYLKR----CYENLTEENRRLHKEVQEL 154


>gi|125585080|gb|EAZ25744.1| hypothetical protein OsJ_09581 [Oryza sativa Japonica Group]
          Length = 390

 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR
Sbjct: 124 GSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRR 179

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQ 106
            R K ++      A+ R+L A+   N  L+  N +LQ +
Sbjct: 180 ARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAE 218


>gi|197116133|dbj|BAG68844.1| homeodomain-containing transcription factor FWA [Arabidopsis
           suecica]
          Length = 689

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 15/91 (16%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R+T  Q++ LE  Y E   P+  +R +L +      N+EPKQ+K WFQN+RC+ K   + 
Sbjct: 48  RHTAYQIQELENFYLENSLPTEDQRYELGQRL----NMEPKQVKFWFQNKRCQMKINSD- 102

Query: 80  SRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
            RL+         N  L E++DRL     QL
Sbjct: 103 -RLE---------NITLREDHDRLLVTQHQL 123


>gi|226530684|ref|NP_001150309.1| homeobox-leucine zipper protein HAT7 [Zea mays]
 gi|195638280|gb|ACG38608.1| homeobox-leucine zipper protein HAT7 [Zea mays]
          Length = 341

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 117 KKRRLNVEQVRTLEKNFELGNKLEPERKLQLARAL----GLQPRQVAIWFQNRRARWKTK 172

Query: 77  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
           +      A+ R+L A+   N  L+  N +LQ ++  L
Sbjct: 173 QLEKDYDALKRQLDAVKADNDALLSHNKKLQAEILSL 209


>gi|258570165|ref|XP_002543886.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237904156|gb|EEP78557.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 697

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 7/76 (9%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +N+   ++  WFQNRR +
Sbjct: 70  VENLSRPRLTKEQVETLEAQFQAQPKPTSNIKRQLA----VQTNLTLPRVANWFQNRRAK 125

Query: 73  EKQRK---EASRLQAV 85
           EKQ+K   E  R+QA+
Sbjct: 126 EKQQKRQEEFKRMQAM 141


>gi|405977546|gb|EKC41989.1| LIM/homeobox protein Lhx3 [Crassostrea gigas]
          Length = 432

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 5/61 (8%)

Query: 22  TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 80
           T +Q+EAL+R Y+E PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 221 TAKQLEALKRAYNESPKPARHVREQLSAE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 276

Query: 81  R 81
           R
Sbjct: 277 R 277


>gi|119331578|gb|ABL63115.1| DNA-binding protein [Catharanthus roseus]
          Length = 282

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 13/123 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +QV+ LE+ +    K    R+ QL +E      ++P+Q+ +WFQNRR R K +
Sbjct: 41  KKRRLTADQVQFLEKSFEVENKLEPERKVQLAKEL----GLQPRQVAIWFQNRRARYKTK 96

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
              KE   L++   KL A    L +EN++L+ +V +L+ E    R+  +      K  +C
Sbjct: 97  QLEKEYDSLKSSFDKLNADYDSLFKENEKLKNEV-KLLTEKLLMREKEKG-----KSKTC 150

Query: 134 ESV 136
           +S+
Sbjct: 151 DSL 153


>gi|326581036|gb|ADZ96470.1| HD-Zip subfamily I trancription factor [Helianthus annuus]
          Length = 313

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 8/97 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R   EQV+ LER +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 92  KKRRLNMEQVKTLERNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 147

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 113
           +      A+ R+  A    +  END LQ Q  +L  E
Sbjct: 148 QLEKDYDALKRQFEA----VKAENDSLQSQNHKLHAE 180


>gi|125542579|gb|EAY88718.1| hypothetical protein OsI_10193 [Oryza sativa Indica Group]
          Length = 384

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR
Sbjct: 118 GSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRR 173

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQ 106
            R K ++      A+ R+L A+   N  L+  N +LQ +
Sbjct: 174 ARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAE 212


>gi|414865055|tpg|DAA43612.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 344

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 120 KKRRLNVEQVRTLEKNFELGNKLEPERKLQLARAL----GLQPRQVAIWFQNRRARWKTK 175

Query: 77  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
           +      A+ R+L A+   N  L+  N +LQ ++  L
Sbjct: 176 QLEKDYDALKRQLDAVKADNDALLSHNKKLQAEILSL 212


>gi|389741606|gb|EIM82794.1| hypothetical protein STEHIDRAFT_170978 [Stereum hirsutum FP-91666
           SS1]
          Length = 1316

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 4/56 (7%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 75
           R +P Q++ LE ++    KPSSI R+QL  +      + P++++VWFQNRR +EK+
Sbjct: 78  RTSPPQLQRLESVFVVDKKPSSITRKQLAHDL----KMSPREVQVWFQNRRAKEKK 129


>gi|195612010|gb|ACG27835.1| hypothetical protein [Zea mays]
          Length = 35

 Score = 51.6 bits (122), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 26/35 (74%)

Query: 780 MGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           MGR  SYE+AVAWKV+ ++    C+  MF+NW+F+
Sbjct: 1   MGRQASYEQAVAWKVVGDDGAPQCLALMFVNWTFI 35


>gi|302793704|ref|XP_002978617.1| hypothetical protein SELMODRAFT_108871 [Selaginella moellendorffii]
 gi|300153966|gb|EFJ20603.1| hypothetical protein SELMODRAFT_108871 [Selaginella moellendorffii]
          Length = 128

 Score = 51.6 bits (122), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + EQV+ALE+ +    K    R+ QL +E      ++P+Q+ VWFQNRR R K +
Sbjct: 35  KKRRLSVEQVKALEKNFEIENKLEPDRKIQLAKEL----GLQPRQVAVWFQNRRARWKTK 90

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
              K+   L++    L A    L +E D+LQ +V  L
Sbjct: 91  QLEKDYDLLKSEYDDLKASYVDLAKERDKLQAEVDLL 127


>gi|255540907|ref|XP_002511518.1| homeobox protein, putative [Ricinus communis]
 gi|223550633|gb|EEF52120.1| homeobox protein, putative [Ricinus communis]
          Length = 319

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +QV+ LE+ +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 91  KKRRLTVDQVQFLEKSFEVENKLEPERKLQLAKDL----GLQPRQVAIWFQNRRARWKTK 146

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              K+   LQ     L A    L++E DRL+ +V+ L 
Sbjct: 147 QMEKDYDVLQTSYNSLKADYDALLQEKDRLKAEVNLLT 184


>gi|309401695|gb|ADI50265.2| homeodomain 20 transcription factor [Nicotiana attenuata]
          Length = 253

 Score = 51.6 bits (122), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 7/94 (7%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 76
           R++ EQ+++LE ++    K    ++QQL RE      ++P+Q+ +WFQN+R R K +   
Sbjct: 45  RFSDEQIKSLEPMFENETKLEPRKKQQLAREL----GLQPRQVAIWFQNKRARWKSKQLE 100

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           ++ + L++    L +    L +EN  L  Q+ +L
Sbjct: 101 RDYNILKSNFDNLASQYNSLKKENQSLLFQLQKL 134


>gi|388493514|gb|AFK34823.1| unknown [Lotus japonicus]
          Length = 147

 Score = 51.6 bits (122), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 76
           R++ EQ+ +LE ++    K    ++ QL ++      ++P+Q+ +WFQNRR R K +   
Sbjct: 41  RFSDEQIRSLECIFESESKLEPRKKIQLAKDL----GLQPRQVAIWFQNRRARWKSKRME 96

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVY 112
           KE  +L+     L +  + L EE + LQ ++ +L Y
Sbjct: 97  KEYRKLKDEYDNLASRFESLKEEKESLQLELQKLSY 132


>gi|302774242|ref|XP_002970538.1| hypothetical protein SELMODRAFT_18196 [Selaginella moellendorffii]
 gi|300162054|gb|EFJ28668.1| hypothetical protein SELMODRAFT_18196 [Selaginella moellendorffii]
          Length = 104

 Score = 51.6 bits (122), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + EQV+ALE+ +    K    R+ QL +E      ++P+Q+ VWFQNRR R K +
Sbjct: 15  KKRRLSVEQVKALEKNFEIENKLEPDRKIQLAKEL----GLQPRQVAVWFQNRRARWKTK 70

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
              K+   L++    L A    L +E D+LQ +V
Sbjct: 71  QLEKDYDLLKSEYDDLKASYVDLAKERDKLQAEV 104


>gi|125572100|gb|EAZ13615.1| hypothetical protein OsJ_03531 [Oryza sativa Japonica Group]
          Length = 759

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 99/440 (22%), Positives = 158/440 (35%), Gaps = 77/440 (17%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
           Y R+T EQ+  +E L+ E P P   +RQQ ++E    S ++ +  K+  ++R  RE  +K
Sbjct: 99  YHRHTAEQIRIMEALFKESPHPDERQRQQAVQERHENSLLKSELEKLQDEHRAMRELAKK 158

Query: 78  EASRLQ----AVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
            +  L     A +    A          RL+ + ++L  E    R  T   + A    S 
Sbjct: 159 PSRCLNCGVVATSSDAAAAATAADTREQRLRLEKAKLKAEIERLR-GTPGKSAADGIASP 217

Query: 134 ESVVTSGQHHLTPQHPP----------RDASPAGLLSIAEETLTEFLSKATGTAVEWVQM 183
               ++G      + PP           D     +L +A   L E +   +     WV+ 
Sbjct: 218 PCSASAGAMQTNSRSPPLHDHDGGFLRHDDDKPRILELATRALDELVGMCSSGEPVWVR- 276

Query: 184 PGMKPGPD------SVGIVAISHGCSG--------VAARACGLVGLE------------- 216
            G++ G D       V +    HG SG         A+R CGLV L+             
Sbjct: 277 -GVETGRDILNYDEYVRLFRRDHGGSGDQMAGWTVEASRECGLVYLDTMHLVHTFMDVDK 335

Query: 217 -----PTRVA-----EILKDRPRGS---------AILYALTTLAPARDFWLLRYTSVLED 257
                PT ++     E++ +R             A L  LT + P R+ +  RY   L  
Sbjct: 336 WKDLFPTMISKAATLEMISNREDDGRDGVLQLMYAELQTLTPMVPTRELYFARYCKKLAA 395

Query: 258 GSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSV 317
               + + S    + G         VR    PSG LI     G   +  V+H      +V
Sbjct: 396 ERWAIVDVSFDESETGVH---ASSAVRCWKNPSGCLIEEQNNGRCKMTWVEHTRCRRCTV 452

Query: 318 PEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEVTQSSVNG----WGRRPAALRAL 368
             + R +  S      +  +AAL     R +  +A  V      G     GRR  ++  L
Sbjct: 453 APLYRAVTASGVAFGARRWVAALQLQCERMVFAVATNVPTRDSTGVSTLAGRR--SVLKL 510

Query: 369 SQRLSRGFNEAVNGFTDEGW 388
           + R++        G  D  W
Sbjct: 511 AHRMTSSLCRTTGGSCDMAW 530


>gi|242049134|ref|XP_002462311.1| hypothetical protein SORBIDRAFT_02g023650 [Sorghum bicolor]
 gi|241925688|gb|EER98832.1| hypothetical protein SORBIDRAFT_02g023650 [Sorghum bicolor]
          Length = 317

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 8/96 (8%)

Query: 20  RYTPEQVEALERLYHECP-KPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR-- 76
           R T EQV  LE  + E   K    R+ +L R       I P+Q+ VWFQNRR R + +  
Sbjct: 103 RLTAEQVRELELSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWRTKQL 158

Query: 77  -KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
            ++  RL+A +  L A    L+ +NDRL+ QV  L 
Sbjct: 159 EQDFDRLRAAHDDLLAGRDALLADNDRLRSQVITLT 194


>gi|75106330|sp|Q5JMF3.1|ROC9_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC9; AltName:
           Full=GLABRA 2-like homeobox protein 9; AltName:
           Full=HD-ZIP protein ROC9; AltName: Full=Homeodomain
           transcription factor ROC9; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 9
 gi|57900354|dbj|BAD87344.1| putative homeodomain protein [Oryza sativa Japonica Group]
          Length = 816

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T EQ+  +E L+ E P P   +RQQ+ ++      +  +Q+K WFQNRR + K   
Sbjct: 99  YHRHTAEQIRIMEALFKESPHPDERQRQQVSKQL----GLSARQVKFWFQNRRTQIKAVQ 154

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L++   KL   ++ + E
Sbjct: 155 ERHENSLLKSELEKLQDEHRAMRE 178


>gi|255575467|ref|XP_002528635.1| homeobox protein, putative [Ricinus communis]
 gi|223531924|gb|EEF33738.1| homeobox protein, putative [Ricinus communis]
          Length = 223

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 8/94 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +Q+E+LER + E  K    R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 61  KKKRLTSDQLESLERSFQEEIKLDPDRKMKLSREL----GLQPRQIAVWFQNRRARWK-- 114

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
             A +L+ +   L     ++ +E   LQ++V +L
Sbjct: 115 --AKQLERLYDSLKEEFDVVSKEKQNLQEEVMKL 146


>gi|255558238|ref|XP_002520146.1| homeobox protein, putative [Ricinus communis]
 gi|223540638|gb|EEF42201.1| homeobox protein, putative [Ricinus communis]
          Length = 305

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 7/98 (7%)

Query: 16  GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 75
            K  R T  QV+ LER +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 81  AKKRRLTATQVQFLERNFEVENKLEPERKIQLAKEL----GLQPRQVAIWFQNRRARFKN 136

Query: 76  R---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           +   K+   L+A   KL A    L++EN+ L+ +   L
Sbjct: 137 KQLEKDYDSLKASYDKLKADYDNLLKENENLKNEFVSL 174


>gi|209171587|gb|ACI42914.1| tendril-less [Lens culinaris]
          Length = 237

 Score = 51.6 bits (122), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 29/129 (22%)

Query: 7   DGKTGSLDNGKYVR-----------YTPEQVEALERLYHECPKPSSIRRQQLIRECPILS 55
           D +T  ++NGK  R            T  QV+ALER ++E  K    R+ +L  E     
Sbjct: 52  DDETNKINNGKDHREKKKTKTKKNKLTSNQVDALERSFNEEIKLDPERKMKLSAEL---- 107

Query: 56  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL---VY 112
            ++P+Q+ VWFQNRR R K            ++L     +L +EN +LQ++V +L   + 
Sbjct: 108 GLQPRQVAVWFQNRRTRWK-----------TKQLEHSYDVLKQENQKLQEEVIELKEKLK 156

Query: 113 ENGYFRQHT 121
           E   FR  T
Sbjct: 157 EKSDFRTQT 165


>gi|358254958|dbj|GAA56650.1| insulin gene enhancer protein isl-2b [Clonorchis sinensis]
          Length = 712

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 11/79 (13%)

Query: 6   KDGKTGSLDNGKYVRYT-------PEQVEALERLYHECPKPSSIRRQQLIRECPILSNIE 58
           ++GK+G     K  + T        +Q+  L   Y   P+P ++ ++QL+     ++++ 
Sbjct: 293 RNGKSGGSKRSKDQKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVE----MTSLS 348

Query: 59  PKQIKVWFQNRRCREKQRK 77
           P+ I+VWFQN+RC++K+R+
Sbjct: 349 PRVIRVWFQNKRCKDKKRQ 367


>gi|15226424|ref|NP_182191.1| homeobox-leucine zipper protein ATHB-7 [Arabidopsis thaliana]
 gi|21431751|sp|P46897.2|ATHB7_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-7; AltName:
           Full=HD-ZIP protein ATHB-7; AltName: Full=Homeodomain
           transcription factor ATHB-7
 gi|3831442|gb|AAC69925.1| homeodomain transcription factor (ATHB-7) [Arabidopsis thaliana]
 gi|15027939|gb|AAK76500.1| putative homeodomain transcription factor ATHB-7 [Arabidopsis
           thaliana]
 gi|20259175|gb|AAM14303.1| putative homeodomain transcription factor protein ATHB-7
           [Arabidopsis thaliana]
 gi|330255645|gb|AEC10739.1| homeobox-leucine zipper protein ATHB-7 [Arabidopsis thaliana]
          Length = 258

 Score = 51.6 bits (122), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           ++ K  K  + +     R++ EQ+++LE ++    +    ++ QL RE      ++P+Q+
Sbjct: 18  LTMKKMKKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLAREL----GLQPRQV 73

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
            +WFQN+R R K ++  +    + +        L  + + L+K+   LV E    ++ TQ
Sbjct: 74  AIWFQNKRARWKSKQLETEYNILRQNYDN----LASQFESLKKEKQALVSELQRLKEATQ 129

Query: 123 STTLATKDTSCES----VVTSGQHHLTPQHPPRDASP 155
             T   ++  C      V  S  HH +     R   P
Sbjct: 130 KKT-QEEERQCSGDQAVVALSSTHHESENEENRRRKP 165


>gi|115481926|ref|NP_001064556.1| Os10g0404900 [Oryza sativa Japonica Group]
 gi|75165783|sp|Q94GL5.1|HOX23_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX23; AltName:
           Full=HD-ZIP protein HOX23; AltName: Full=Homeodomain
           transcription factor HOX23; AltName: Full=OsHox23
 gi|187609446|sp|A2Z734.1|HOX23_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX23; AltName:
           Full=HD-ZIP protein HOX23; AltName: Full=Homeodomain
           transcription factor HOX23; AltName: Full=OsHox23
 gi|15217320|gb|AAK92664.1|AC090487_6 Putative homeotic protein [Oryza sativa Japonica Group]
 gi|31431979|gb|AAP53678.1| HAHB-1, putative [Oryza sativa Japonica Group]
 gi|113639165|dbj|BAF26470.1| Os10g0404900 [Oryza sativa Japonica Group]
 gi|125531853|gb|EAY78418.1| hypothetical protein OsI_33507 [Oryza sativa Indica Group]
          Length = 351

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + EQV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 104 KKRRLSVEQVRTLERSFESGNKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTK 159

Query: 77  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
           +      A+ R+L A    N  L+  N +L  ++  L
Sbjct: 160 QLEKDFDALRRQLDAARAENDALLSLNSKLHAEIVAL 196


>gi|76577747|gb|ABA54144.1| homeobox-leucine zipper-like protein [Picea glauca]
          Length = 309

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV ALE+ +    K    ++ QL +       ++P+QI VWFQNRR R K +
Sbjct: 87  KKRRLTLEQVRALEKNFEMANKLEPEKKMQLAKAL----GLQPRQIAVWFQNRRARWKTK 142

Query: 77  KEASRLQAVNRKLTAMNK---LLMEENDRLQKQVSQL 110
           +       + +   A+ +    LMEEN+ LQ  + ++
Sbjct: 143 QLEKDFNVLKQDYDALKQDYDNLMEENNNLQAMIERM 179


>gi|357141086|ref|XP_003572077.1| PREDICTED: homeobox-leucine zipper protein HOX1-like [Brachypodium
           distachyon]
          Length = 272

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           +D  +G+  + K +R + +Q   LE  +++    +  ++  L R+      + P+Q++VW
Sbjct: 114 EDSGSGAGGSRKKLRLSKDQSAVLEDSFNQHSTLNPKQKAALARQL----GLRPRQVEVW 169

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           FQNRR R K ++     +A+ R+  A    L EEN RL ++V  L     + + + ++  
Sbjct: 170 FQNRRARTKLKQTEVDCEALRRRCDA----LTEENRRLLREVQALKLPLPHPQLYMRAPP 225

Query: 126 LATKDTSCESVVTSGQ 141
           L T   SCE V  SG+
Sbjct: 226 L-TMCPSCERVAPSGK 240


>gi|4262185|gb|AAD14502.1| putative DNA-binding protein [Arabidopsis thaliana]
          Length = 282

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQ++ALE+ +    K  S R+ +L R       ++P+QI +WFQNRR
Sbjct: 92  GSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARAL----GLQPRQIAIWFQNRR 147

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 107
            R K ++       + R+  ++   N++L  +N +LQ QV
Sbjct: 148 ARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQV 187


>gi|302398829|gb|ADL36709.1| HD domain class transcription factor [Malus x domestica]
          Length = 324

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 16  GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 75
           GK  R T +QV+ LE+ +    K    R+  L ++      ++P+Q+ +WFQNRR R K 
Sbjct: 88  GKKRRLTADQVQFLEKSFDVENKLEPERKVLLAKDL----GLQPRQVAIWFQNRRARWKT 143

Query: 76  R---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           +   K+   LQA    L A  + L +END+L+ +V+ L
Sbjct: 144 KQLEKDYEELQANYNNLKANCESLSKENDKLKAEVTVL 181


>gi|170053181|ref|XP_001862556.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
 gi|167873811|gb|EDS37194.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
          Length = 438

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 9/86 (10%)

Query: 8   GKTGSLDNGKYVR----YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           G TG  D GK  R       +Q++ L   Y+  P+P ++ ++QL+     ++ + P+ I+
Sbjct: 222 GPTGPSD-GKPTRVRTVLNEKQLQTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIR 276

Query: 64  VWFQNRRCREKQRKEASRLQAVNRKL 89
           VWFQN+RC++K++    +LQ    K+
Sbjct: 277 VWFQNKRCKDKKKTIQMKLQMQQEKV 302


>gi|209171585|gb|ACI42913.1| tendril-less [Lathyrus odoratus]
          Length = 237

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 26/115 (22%)

Query: 7   DGKTGSLDNGKYVRY-----------TPEQVEALERLYHECPKPSSIRRQQLIRECPILS 55
           D +T  ++NGK  +            T  QV+ALER +HE  K    R+ +L  E     
Sbjct: 52  DDETKMINNGKECQKKKKSKNKKNKLTSNQVDALERSFHEEIKLEPERKMKLSAEL---- 107

Query: 56  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
            ++P+Q+ VWFQNRR R K            ++L     +L +EN +LQ++V +L
Sbjct: 108 GLQPRQVAVWFQNRRTRWK-----------TKQLEHSYDVLKQENQKLQEEVMEL 151


>gi|413944021|gb|AFW76670.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 732

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 7/71 (9%)

Query: 31  RLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK---QRKEASRLQAVNR 87
           R++ ECP P   +R  L RE      +EP+QIK WFQNRR + K   +R +   L+A N 
Sbjct: 77  RMFKECPHPDENQRAALSREL----GLEPRQIKFWFQNRRTQMKAQHERADNCFLRAEND 132

Query: 88  KLTAMNKLLME 98
           K+   N  + E
Sbjct: 133 KIRCENITMRE 143



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 147/362 (40%), Gaps = 89/362 (24%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           L+ +T + P R+   LRY   +E G   V + SL+  ++     P     R+  +PSG L
Sbjct: 369 LHIMTPVVPTRELSFLRYCKQIEQGLWAVADVSLEGQRDAHYGVP----SRSRRMPSGCL 424

Query: 294 IRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQKTTMAAL-RQLRQMAQEVT 351
           I     G S +  V+HM++E      VL R L  S         +AAL R   + A   T
Sbjct: 425 IADMSNGYSKVTWVEHMEIEQMLPINVLYRNLVLSGAAFGAHRWLAALQRACERFASVAT 484

Query: 352 -------QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
                   + V   G+R  ++  LSQR+   F  +++    + WT++   G  DV+V V+
Sbjct: 485 LGVPHHDVAGVTPEGKR--SMTKLSQRMVSSFCASLSSSPLQRWTLLS--GTTDVSVRVS 540

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNID 462
           +        + S  +G P   N V+ + A+ +   VP   +  F+R+   RS+W     D
Sbjct: 541 T--------HRSTDSGQP---NGVVLSAATSIWLPVPGDHVFAFVRDENARSQW-----D 584

Query: 463 VYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM--- 519
           V S                   G+QV              EV ++   G +P + I    
Sbjct: 585 VLS------------------HGNQV-------------QEVSRIPN-GSNPGNCISLLR 612

Query: 520 -----PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRI 565
                   M +LQ     +     + A ++++PID   A+           PLLPSGF I
Sbjct: 613 GLNANQNSMLILQ-----ESCTDASGALVVYSPIDIPAANVVMSGEDPSGIPLLPSGFAI 667

Query: 566 IP 567
           +P
Sbjct: 668 LP 669


>gi|195114382|ref|XP_002001746.1| GI17017 [Drosophila mojavensis]
 gi|193912321|gb|EDW11188.1| GI17017 [Drosophila mojavensis]
          Length = 533

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 4   SCKDGKTGSLDNGKYVR----YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           S +D +     +GK  R       +Q+  L   Y+  P+P ++ ++QL+     ++ + P
Sbjct: 235 SIRDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTGLSP 290

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRK 88
           + I+VWFQN+RC++K++    +LQ    K
Sbjct: 291 RVIRVWFQNKRCKDKKKTIQMKLQMQQEK 319


>gi|449449152|ref|XP_004142329.1| PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis
           sativus]
          Length = 197

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 8/103 (7%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
              GS +  K +R T EQ   LE+ + +    + ++++ L      +  ++P+QI+VWFQ
Sbjct: 58  NNNGSNNPRKKLRLTKEQSHLLEQSFRQNHTLNPVQKETLAE----VLKLKPRQIEVWFQ 113

Query: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           NRR R K ++     + + R       LL E+N RLQK+V +L
Sbjct: 114 NRRARSKLKQTEMECEYLKRWFG----LLTEQNKRLQKEVEEL 152


>gi|225456662|ref|XP_002271692.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Vitis
           vinifera]
          Length = 317

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +QV+ LER +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 81  KKRRLTADQVQFLERNFEVENKLEPERKVQLAKDL----GLQPRQVAIWFQNRRARWKTK 136

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
              K+   LQA    L A  + L++E D L+ +V
Sbjct: 137 QLEKDFGALQASYNSLKAEYENLLKEKDELKTEV 170


>gi|312283063|dbj|BAJ34397.1| unnamed protein product [Thellungiella halophila]
          Length = 295

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 13/138 (9%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 79  GSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 134

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA 127
            R K ++       + R+  A+   N LL   N +LQ ++  L       R+ T+S  L 
Sbjct: 135 ARWKTKQLEKDYDTLKRQFDALKAENDLLQTHNQKLQAEIMGLKN-----REQTESINLN 189

Query: 128 TK-DTSCESVVTSGQHHL 144
            + + SC +   +   +L
Sbjct: 190 KETEGSCSNRSDNSSDNL 207


>gi|171692673|ref|XP_001911261.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946285|emb|CAP73086.1| unnamed protein product [Podospora anserina S mat+]
          Length = 707

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 224 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 278

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRL 103
               RL A +R+     + + E+ D L
Sbjct: 279 ----RLTADDRERMIKMRAVPEDFDNL 301


>gi|197116203|dbj|BAG68841.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kawasakiana]
          Length = 689

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 15/84 (17%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R+T  Q + LE +Y E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 48  RHTAYQTQELENVYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 101

Query: 80  SRLQAVNRKLTAMNKLLMEENDRL 103
            RL+         N +L E++DRL
Sbjct: 102 DRLE---------NIILREDHDRL 116


>gi|197116193|dbj|BAG68836.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. gemmifera]
          Length = 689

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 15/84 (17%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R+T  Q + LE +Y E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 48  RHTAYQTQELENVYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 101

Query: 80  SRLQAVNRKLTAMNKLLMEENDRL 103
            RL+         N +L E++DRL
Sbjct: 102 DRLE---------NIILREDHDRL 116


>gi|197116195|dbj|BAG68837.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. gemmifera]
          Length = 689

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 15/84 (17%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R+T  Q + LE +Y E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 48  RHTAYQTQELENVYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 101

Query: 80  SRLQAVNRKLTAMNKLLMEENDRL 103
            RL+         N +L E++DRL
Sbjct: 102 DRLE---------NIILREDHDRL 116


>gi|18042103|gb|AAL57830.1|AF452568_1 homeodomain transcription factor Zen2 [Tribolium castaneum]
          Length = 243

 Score = 51.2 bits (121), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 12/136 (8%)

Query: 15  NGKYVR--YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           NGK  R  YT  Q+  LER +H        RR Q+ +      N+  +QIK+WFQNRR +
Sbjct: 84  NGKRARTAYTSSQLVELEREFHRSKYLCRPRRIQMAQNL----NLTERQIKIWFQNRRMK 139

Query: 73  -EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDT 131
            +K+ K        +    +M+      N+    +  Q +Y      Q   S+ +  KD 
Sbjct: 140 FKKEEKNKVVTPKTSPNEASMSPQSTSSNNSASPKACQFLYN-----QFPGSSQVVVKDE 194

Query: 132 SCESVVTSGQHHLTPQ 147
           +C+    S      PQ
Sbjct: 195 TCQYDTESSYQFNDPQ 210


>gi|15148920|gb|AAK84887.1|AF402606_1 homeodomain leucine zipper protein HDZ3 [Phaseolus vulgaris]
          Length = 224

 Score = 51.2 bits (121), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 76
           R + EQV  LE+ + E  K    R+ QL ++      ++P+Q+ VWFQNRR R K +   
Sbjct: 9   RLSSEQVHLLEKSFEEENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTKQLE 64

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           ++   L++    L +    LM++N++L+ +V  L
Sbjct: 65  RDFDVLKSSYDTLLSSYDSLMKDNEKLKSEVVSL 98


>gi|367024589|ref|XP_003661579.1| hypothetical protein MYCTH_2301118 [Myceliophthora thermophila ATCC
           42464]
 gi|347008847|gb|AEO56334.1| hypothetical protein MYCTH_2301118 [Myceliophthora thermophila ATCC
           42464]
          Length = 680

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 194 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 248

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRL 103
               RL A +R+     + + E+ D L
Sbjct: 249 ----RLTADDRERMMKMRAVPEDFDSL 271


>gi|224069752|ref|XP_002326405.1| predicted protein [Populus trichocarpa]
 gi|222833598|gb|EEE72075.1| predicted protein [Populus trichocarpa]
          Length = 121

 Score = 51.2 bits (121), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 8/92 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +Q+E+LE+ + E  K    R+ +L RE      ++P+QI VWFQNRR R K +
Sbjct: 31  KKKRLTSDQLESLEKSFQEEIKLDPDRKMKLSREL----GLQPRQIAVWFQNRRARWKAK 86

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVS 108
           +       + ++  +++K    E  +LQ++V+
Sbjct: 87  QLERLYDNLKQEFDSVSK----EKQKLQEEVN 114


>gi|17136568|ref|NP_476775.1| tailup, isoform A [Drosophila melanogaster]
 gi|195580000|ref|XP_002079844.1| GD21801 [Drosophila simulans]
 gi|7298500|gb|AAF53720.1| tailup, isoform A [Drosophila melanogaster]
 gi|194191853|gb|EDX05429.1| GD21801 [Drosophila simulans]
          Length = 534

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 4   SCKDGKTGSLDNGKYVR----YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           S +D +     +GK  R       +Q+  L   Y+  P+P ++ ++QL+     ++++ P
Sbjct: 227 SIRDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTSLSP 282

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRK 88
           + I+VWFQN+RC++K++    +LQ    K
Sbjct: 283 RVIRVWFQNKRCKDKKKTIQMKLQMQQEK 311


>gi|402072464|gb|EJT68253.1| hypothetical protein GGTG_14167 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 837

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 259 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 313

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQ 104
               RL A +R      + + ++ D +Q
Sbjct: 314 ----RLTADDRDRMIKMRAVPDDFDNVQ 337


>gi|195344936|ref|XP_002039032.1| GM17053 [Drosophila sechellia]
 gi|194134162|gb|EDW55678.1| GM17053 [Drosophila sechellia]
          Length = 534

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 4   SCKDGKTGSLDNGKYVR----YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           S +D +     +GK  R       +Q+  L   Y+  P+P ++ ++QL+     ++++ P
Sbjct: 227 SIRDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTSLSP 282

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRK 88
           + I+VWFQN+RC++K++    +LQ    K
Sbjct: 283 RVIRVWFQNKRCKDKKKTIQMKLQMQQEK 311


>gi|351726046|ref|NP_001237881.1| HDZip I protein [Glycine max]
 gi|62752942|gb|AAX98670.1| HDZip I protein [Glycine max]
          Length = 245

 Score = 51.2 bits (121), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + EQV+ LE+ + E  K    R   L +E      ++P+Q+ +WFQNRR R K +
Sbjct: 10  KKRRLSVEQVKFLEKSFDEENKLEPERMIWLAKEL----GLQPRQVAIWFQNRRARWKTK 65

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
              K+   LQ     L A    L+ E D+L+ +V++L
Sbjct: 66  QMEKDYDSLQTSYNDLKANYDNLLREKDKLKAEVARL 102


>gi|357122233|ref|XP_003562820.1| PREDICTED: homeobox-leucine zipper protein HOX14-like [Brachypodium
           distachyon]
          Length = 233

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 5   CKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 64
           C+D   G L + K  R + EQVE LE  + E  K  + R+  L  E      ++PKQ+ V
Sbjct: 44  CEDVDGGLLLDPKKRRLSDEQVEMLELSFREERKLETGRKVHLAAEL----GLDPKQVAV 99

Query: 65  WFQNRRCREKQR 76
           WFQNRR R K +
Sbjct: 100 WFQNRRARHKSK 111


>gi|297828596|ref|XP_002882180.1| homeobox-leucine zipper protein hat5 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328020|gb|EFH58439.1| homeobox-leucine zipper protein hat5 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 268

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 66  KKRRLTTEQVHLLEKSFETENKLEPDRKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 121

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++   L++   +L +    ++++ND+L+ +V+ L 
Sbjct: 122 QLERDYDLLKSTYDQLLSNYDSIVKDNDKLRSEVTSLT 159


>gi|297810781|ref|XP_002873274.1| homeobox-leucine zipper protein 14 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319111|gb|EFH49533.1| homeobox-leucine zipper protein 14 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 343

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 14/132 (10%)

Query: 14  DNG---KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           +NG   K +R + +Q   LE  + E    S++  +Q I     L N+ P+Q++VWFQNRR
Sbjct: 184 ENGSTRKKLRLSKDQSAFLEDSFKEH---STLNPKQKIALAKQL-NLRPRQVEVWFQNRR 239

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLAT 128
            R K ++     + + R   +    L EEN RLQK+V +L  +  +  F     +TTL T
Sbjct: 240 ARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTLKTSTPFYMQLPATTL-T 294

Query: 129 KDTSCESVVTSG 140
              SCE V TS 
Sbjct: 295 MCPSCERVATSA 306


>gi|197116199|dbj|BAG68839.1| homeodomain-containing transcription factor FWA [Arabidopsis
           arenosa]
          Length = 689

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 15/91 (16%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R+T  Q + LE  Y E   P+  +R +L +      N+EPKQ+K WFQN+RC+ K    +
Sbjct: 48  RHTAYQTQELENFYLENSLPTEDQRYELGQRL----NMEPKQVKFWFQNKRCQMK--INS 101

Query: 80  SRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
            RL+         N  L E++DRL     QL
Sbjct: 102 DRLE---------NITLREDHDRLLVTQHQL 123


>gi|165968281|gb|ABY75950.1| At5g03790-like protein [Arabidopsis lyrata]
          Length = 193

 Score = 50.8 bits (120), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T  Q+ +LER + E  K  S R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 37  KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWK-- 90

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
             A +L+ +   L     ++  E   L ++V +L       R   +   L  K  S  ++
Sbjct: 91  --AKQLEQLYDSLRQEYDVVSREKQMLHEEVKKL-------RAILRDQGLIKKQISAGTI 141

Query: 137 VTSGQHHLT 145
             SG+   T
Sbjct: 142 KVSGEEDTT 150


>gi|22326632|ref|NP_196289.2| homeobox-leucine zipper protein HAT14 [Arabidopsis thaliana]
 gi|90101577|sp|P46665.3|HAT14_ARATH RecName: Full=Homeobox-leucine zipper protein HAT14; AltName:
           Full=Homeodomain-leucine zipper protein HAT14;
           Short=HD-ZIP protein 14
 gi|110743069|dbj|BAE99427.1| homeobox protein [Arabidopsis thaliana]
 gi|167730916|emb|CAD24012.2| homeodomain-leucine zipper protein HAT14 [Arabidopsis thaliana]
 gi|332003670|gb|AED91053.1| homeobox-leucine zipper protein HAT14 [Arabidopsis thaliana]
          Length = 336

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 13/136 (9%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           D + GS    K +R + +Q   LE  + E    S++  +Q I     L N+ P+Q++VWF
Sbjct: 182 DDENGS--TRKKLRLSKDQSAFLEDSFKEH---STLNPKQKIALAKQL-NLRPRQVEVWF 235

Query: 67  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQST 124
           QNRR R K ++     + + R   +    L EEN RLQK+V +L  +  +  F     +T
Sbjct: 236 QNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTLKTSTPFYMQLPAT 291

Query: 125 TLATKDTSCESVVTSG 140
           TL T   SCE V TS 
Sbjct: 292 TL-TMCPSCERVATSA 306


>gi|113205174|gb|AAT40518.2| Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum]
          Length = 307

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 17/126 (13%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 73  GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 128

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKD 130
            R K ++     + + R+  A    +  END LQ Q  +L         H +  +L  ++
Sbjct: 129 ARWKTKQLEKDYEVLKRQFDA----IKAENDALQTQNQKL---------HAEIMSLKNRE 175

Query: 131 TSCESV 136
              ES+
Sbjct: 176 QPTESI 181


>gi|48209882|gb|AAT40488.1| putative DNA-binding protein [Solanum demissum]
          Length = 304

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 17/126 (13%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 73  GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 128

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKD 130
            R K ++     + + R+  A    +  END LQ Q  +L         H +  +L  ++
Sbjct: 129 ARWKTKQLEKDYEVLKRQFDA----IKAENDALQTQNQKL---------HAEIMSLKNRE 175

Query: 131 TSCESV 136
              ES+
Sbjct: 176 QPTESI 181


>gi|541872|pir||B44088 homeotic protein HAT5 - Arabidopsis thaliana (fragments)
          Length = 116

 Score = 50.8 bits (120), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 10/115 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 4   KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 59

Query: 77  KEAS------RLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT 125
           ++ +      R +   ++L     LL    D+L      +V +N   R    S T
Sbjct: 60  QQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLT 114


>gi|1895062|gb|AAB49892.1| LIM homeobox protein [Drosophila melanogaster]
          Length = 534

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 4   SCKDGKTGSLDNGKYVR----YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           S +D +     +GK  R       +Q+  L   Y+  P+P ++ ++QL+     ++++ P
Sbjct: 227 SIRDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTSLSP 282

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRK 88
           + I+VWFQN+RC++K++    +LQ    K
Sbjct: 283 RVIRVWFQNKRCKDKKKTIQMKLQMHEEK 311


>gi|3868831|dbj|BAA34236.1| CRHB2 [Ceratopteris richardii]
          Length = 308

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 16/98 (16%)

Query: 17  KYVRYTPEQVEALERLYHE----CPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           K +R + EQ   LE  + E     PK  S+  +QL        N+ P+Q++VWFQNRR R
Sbjct: 193 KKLRLSKEQSALLEESFKEHSTLNPKQKSLLAKQL--------NLRPRQVEVWFQNRRAR 244

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
            K ++     + + R   +    L EEN RLQK+V++L
Sbjct: 245 TKLKQTEVDCELLKRCCES----LTEENRRLQKEVAEL 278


>gi|358333778|dbj|GAA52242.1| LIM homeobox protein 3/4, partial [Clonorchis sinensis]
          Length = 405

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 5/61 (8%)

Query: 22  TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 80
           T +Q+EAL+R Y+E PKP    R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 124 TAKQLEALKRAYNESPKPVRHVREQLSAE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 179

Query: 81  R 81
           R
Sbjct: 180 R 180


>gi|226532128|ref|NP_001149340.1| homeodomain-leucine zipper transcription factor TaHDZipI-1 [Zea
           mays]
 gi|195626512|gb|ACG35086.1| homeodomain-leucine zipper transcription factor TaHDZipI-1 [Zea
           mays]
          Length = 309

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R  PEQV ALER +    +    R+ ++ R+  +     P+Q+ VWFQNRR R K +
Sbjct: 51  KKRRLAPEQVRALERCFEADNRLDPDRKARVARDLAL----HPRQVAVWFQNRRARWKAK 106

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
              ++ + L+A +  L A    L ++ D L  ++ +L
Sbjct: 107 ALHRDLAALRARHDALRAACDALRQDKDALAAEIREL 143


>gi|195035223|ref|XP_001989077.1| GH11521 [Drosophila grimshawi]
 gi|193905077|gb|EDW03944.1| GH11521 [Drosophila grimshawi]
          Length = 283

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
           +Q+  L   Y+  P+P ++ ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 81  KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 136

Query: 84  AVNRK 88
               K
Sbjct: 137 MQQEK 141


>gi|357440243|ref|XP_003590399.1| Homeobox-leucine zipper protein ATHB-22 [Medicago truncatula]
 gi|355479447|gb|AES60650.1| Homeobox-leucine zipper protein ATHB-22 [Medicago truncatula]
          Length = 232

 Score = 50.8 bits (120), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 8/94 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQ+E+LE  + E  K    R+ +L +E      ++P+QI +WFQNRR R K +
Sbjct: 59  KKKRLTSEQMESLESSFQEEIKLDPQRKMKLSKEL----GLQPRQIAIWFQNRRARWKTK 114

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           +    L+ +   L    +++ +E  +LQ +V +L
Sbjct: 115 Q----LEHLYDSLRHQFEVVSKEKQQLQDEVMKL 144


>gi|15222452|ref|NP_177136.1| homeobox-leucine zipper protein ATHB-13 [Arabidopsis thaliana]
 gi|118573191|sp|Q8LC03.2|ATB13_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-13; AltName:
           Full=HD-ZIP protein ATHB-13; AltName: Full=Homeodomain
           transcription factor ATHB-13
 gi|6644295|gb|AAF20996.1|AF208044_1 homeodomain leucine-zipper protein ATHB13 [Arabidopsis thaliana]
 gi|12325190|gb|AAG52541.1|AC013289_8 homeobox gene 13 protein; 11736-10437 [Arabidopsis thaliana]
 gi|15982929|gb|AAL09811.1| At1g69780/T6C23_2 [Arabidopsis thaliana]
 gi|22137260|gb|AAM91475.1| At1g69780/T6C23_2 [Arabidopsis thaliana]
 gi|332196853|gb|AEE34974.1| homeobox-leucine zipper protein ATHB-13 [Arabidopsis thaliana]
          Length = 294

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 13/138 (9%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 79  GSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 134

Query: 71  CREKQRKEASRLQAVNRK---LTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA 127
            R K ++       + R+   L A N LL   N +LQ ++  L       R+ T+S  L 
Sbjct: 135 ARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKN-----REQTESINLN 189

Query: 128 TK-DTSCESVVTSGQHHL 144
            + + SC +   +   +L
Sbjct: 190 KETEGSCSNRSDNSSDNL 207


>gi|147860587|emb|CAN83969.1| hypothetical protein VITISV_039798 [Vitis vinifera]
          Length = 333

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +QV+ LER +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 97  KKRRLTADQVQFLERNFEVENKLEPERKVQLAKDL----GLQPRQVAIWFQNRRARWKTK 152

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
              K+   LQA    L A  + L++E D L+ +V
Sbjct: 153 QLEKDFGALQASYNSLKAEYENLLKEKDELKTEV 186


>gi|296086402|emb|CBI31991.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 12/127 (9%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 69  GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 124

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYF--RQHTQSTTLAT 128
            R K ++       + R+  A+      END LQ Q  +L  E      R+ T+S  L  
Sbjct: 125 ARWKTKQLEKDYDLLKRQFEAVKA----ENDALQAQNQKLHAEMLALKSREPTESINLNI 180

Query: 129 KDT--SC 133
           K+T  SC
Sbjct: 181 KETEGSC 187


>gi|392869529|gb|EAS28038.2| hypothetical protein CIMG_08965 [Coccidioides immitis RS]
          Length = 665

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 7/76 (9%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +N+   ++  WFQNRR +
Sbjct: 70  VENLSRPRLTKEQVETLEAQFQAQPKPTSNVKRQLA----MQTNLTLPRVANWFQNRRAK 125

Query: 73  EKQRK---EASRLQAV 85
           EKQ+K   E  R+QA+
Sbjct: 126 EKQQKRQEEFKRMQAM 141


>gi|116787413|gb|ABK24498.1| unknown [Picea sitchensis]
          Length = 309

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV ALE+ +    K    ++ QL +       ++P+QI VWFQNRR R K +
Sbjct: 87  KKRRLTLEQVRALEKNFEIANKLEPEKKMQLAKAL----GLQPRQIAVWFQNRRARWKTK 142

Query: 77  KEASRLQAVNRKLTAMNK---LLMEENDRLQKQVSQL 110
           +       + +   A+ +    LMEEN+ LQ  + ++
Sbjct: 143 QLEKDFNVLKQDYDALKQDYDNLMEENNNLQAMIERM 179


>gi|357533803|gb|AET82955.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533855|gb|AET82981.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533901|gb|AET83004.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
          Length = 146

 Score = 50.8 bits (120), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 8/109 (7%)

Query: 6   KDGKTGSLDNG-KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 64
           +DG    +  G K  R T EQ  ALE+ +    K    ++ QL +       ++P+QI V
Sbjct: 22  EDGSDDCIHLGEKKRRLTLEQARALEKNFEMANKLEPEKKMQLAKAL----GLQPRQIAV 77

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNK---LLMEENDRLQKQVSQL 110
           WFQNRR R K ++       +     ++ +    LMEEN+ +Q  + +L
Sbjct: 78  WFQNRRARWKTKQLEKDFNILKHDYDSLKQNYDNLMEENNNIQAMIERL 126


>gi|194879942|ref|XP_001974333.1| GG21675 [Drosophila erecta]
 gi|190657520|gb|EDV54733.1| GG21675 [Drosophila erecta]
          Length = 534

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 4   SCKDGKTGSLDNGKYVR----YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           S +D +     +GK  R       +Q+  L   Y+  P+P ++ ++QL+     ++++ P
Sbjct: 227 SIRDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTSLSP 282

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRK 88
           + I+VWFQN+RC++K++    +LQ    K
Sbjct: 283 RVIRVWFQNKRCKDKKKTIQMKLQMQQEK 311


>gi|226493983|ref|NP_001152336.1| homeobox-leucine zipper protein ATHB-4 [Zea mays]
 gi|195655261|gb|ACG47098.1| homeobox-leucine zipper protein ATHB-4 [Zea mays]
 gi|414585999|tpg|DAA36570.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 227

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 11/138 (7%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           +DG  G   + K +R + +Q   LE  + E P  +  ++  L ++      + P+Q++VW
Sbjct: 66  EDGGCGIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQKAALAQQL----GLRPRQVEVW 121

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ---LVYENGYFRQHTQ 122
           FQNRR R K ++     + + R      + L EEN RLQK+V +   L   + +   H  
Sbjct: 122 FQNRRARTKLKQTEVDCEYLKR----CCETLTEENRRLQKEVQELRALKLVSPHLYMHMS 177

Query: 123 STTLATKDTSCESVVTSG 140
             T  T   SCE V +S 
Sbjct: 178 PPTTLTMCPSCERVSSSN 195


>gi|187609462|sp|A2YW03.2|HOX27_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX27; AltName:
           Full=HD-ZIP protein HOX27; AltName: Full=Homeodomain
           transcription factor HOX27; AltName: Full=OsHox27
          Length = 354

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 11/125 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + E    S++  +Q +     L N+ P+Q++VWFQNRR R K +
Sbjct: 174 KKLRLSKEQSAFLEESFKEH---STLNPKQKVALAKQL-NLRPRQVEVWFQNRRARTKLK 229

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
           +     + + R      + L EEN RL K++++L  +     F  H  +TTL+    SCE
Sbjct: 230 QTEVDCEYLKR----CCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMC-PSCE 284

Query: 135 SVVTS 139
            V ++
Sbjct: 285 RVASN 289


>gi|357486711|ref|XP_003613643.1| Homeobox-leucine zipper protein [Medicago truncatula]
 gi|355514978|gb|AES96601.1| Homeobox-leucine zipper protein [Medicago truncatula]
          Length = 182

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 8/111 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R      N++P+Q+ +WFQNRR
Sbjct: 71  GSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARAL----NLQPRQVAIWFQNRR 126

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV-SQLVYENGYF 117
            R K ++       + R+  A+   N  L  +N +LQ +V S L+  N  F
Sbjct: 127 ARWKTKQLEKDYDVLKRQYDAIKLDNDALQAQNQKLQAEVCSFLLTHNHSF 177


>gi|218201267|gb|EEC83694.1| hypothetical protein OsI_29510 [Oryza sativa Indica Group]
          Length = 352

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 11/125 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + E    S++  +Q +     L N+ P+Q++VWFQNRR R K +
Sbjct: 172 KKLRLSKEQSAFLEESFKEH---STLNPKQKVALAKQL-NLRPRQVEVWFQNRRARTKLK 227

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
           +     + + R      + L EEN RL K++++L  +     F  H  +TTL+    SCE
Sbjct: 228 QTEVDCEYLKR----CCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMC-PSCE 282

Query: 135 SVVTS 139
            V ++
Sbjct: 283 RVASN 287


>gi|297838751|ref|XP_002887257.1| ATHB13 [Arabidopsis lyrata subsp. lyrata]
 gi|297333098|gb|EFH63516.1| ATHB13 [Arabidopsis lyrata subsp. lyrata]
          Length = 293

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 13/138 (9%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 79  GSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 134

Query: 71  CREKQRKEASRLQAVNRK---LTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA 127
            R K ++       + R+   L A N LL   N +LQ ++  L       R+ T+S  L 
Sbjct: 135 ARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKN-----REQTESINLN 189

Query: 128 TK-DTSCESVVTSGQHHL 144
            + + SC +   +   +L
Sbjct: 190 KETEGSCSNRSDNSSDNL 207


>gi|87308004|ref|ZP_01090146.1| hypothetical protein DSM3645_20442 [Blastopirellula marina DSM
           3645]
 gi|87289086|gb|EAQ80978.1| hypothetical protein DSM3645_20442 [Blastopirellula marina DSM
           3645]
          Length = 147

 Score = 50.8 bits (120), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 9/145 (6%)

Query: 674 RWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLE 733
           R +  SYR ++GV+L++ +    ++ L+ L+     V+    +A P+F F NQ  LD+ E
Sbjct: 2   RHLLDSYRRWVGVELIERTG-AEQTDLEQLFTLPVVVVSHDAQADPIFQFGNQTALDLWE 60

Query: 734 TTLVAL----QDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERA 789
             L         +T E +  D   + L     +  + G+     G+ +SS GR    E+A
Sbjct: 61  LKLPEFLKMPSRLTAEPLHRDERARLL----QRTERDGYVDDYRGVRISSRGRRFYIEQA 116

Query: 790 VAWKVLNEEETAHCICFMFINWSFV 814
             W +++E +T       F +W+F+
Sbjct: 117 TIWNIVDEADTYIGQAATFDHWTFL 141


>gi|17136566|ref|NP_476774.1| tailup, isoform B [Drosophila melanogaster]
 gi|5052638|gb|AAD38649.1|AF145674_1 tailup [Drosophila melanogaster]
 gi|22946785|gb|AAN11018.1| tailup, isoform B [Drosophila melanogaster]
 gi|220942306|gb|ACL83696.1| tup-PB [synthetic construct]
 gi|220952524|gb|ACL88805.1| tup-PB [synthetic construct]
          Length = 465

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 4   SCKDGKTGSLDNGKYVR----YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           S +D +     +GK  R       +Q+  L   Y+  P+P ++ ++QL+     ++++ P
Sbjct: 227 SIRDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTSLSP 282

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRK 88
           + I+VWFQN+RC++K++    +LQ    K
Sbjct: 283 RVIRVWFQNKRCKDKKKTIQMKLQMQQEK 311


>gi|116788135|gb|ABK24769.1| unknown [Picea sitchensis]
          Length = 201

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV ALE+ +    K    ++ QL +       ++P+QI VWFQNRR R K +
Sbjct: 87  KKRRLTLEQVRALEKNFEIANKLEPEKKMQLAKAL----GLQPRQIAVWFQNRRARWKTK 142

Query: 77  KEASRLQAVNRKLTAMNK---LLMEENDRLQKQV 107
           +       + +   A+ +    LMEEN+ LQ  V
Sbjct: 143 QLEKDFNVLKQDYDALKQDYDNLMEENNNLQAMV 176


>gi|21555784|gb|AAM63933.1| homeobox gene 13 protein [Arabidopsis thaliana]
          Length = 288

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 12/119 (10%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 73  GSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 128

Query: 71  CREKQRKEASRLQAVNRK---LTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTL 126
            R K ++       + R+   L A N LL   N +LQ ++  L       R+ T+S  L
Sbjct: 129 ARWKTKQLEKDYDTLKRQFHTLKAENDLLQTHNQKLQAEIMGLKN-----REQTESINL 182


>gi|449451247|ref|XP_004143373.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Cucumis sativus]
 gi|449482562|ref|XP_004156324.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Cucumis sativus]
          Length = 165

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D+ K  R + +Q+EALER + E  K    R+ +L +E      ++P+QI VWFQNRR R
Sbjct: 6   VDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKEL----GLQPRQIAVWFQNRRAR 61

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
            K ++       + ++   ++K    E   LQ++V +L
Sbjct: 62  WKTKQLEHLYDTLKQQFDTISK----EKHNLQQEVMKL 95


>gi|356568606|ref|XP_003552501.1| PREDICTED: homeobox-leucine zipper protein HAT3-like [Glycine max]
          Length = 289

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 8/94 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R T EQ   LE  + E    +  R+Q L  E     N++P+Q++VWFQNRR R K +
Sbjct: 128 KKLRLTKEQSMVLEETFKEHNTLNPKRKQALAEEL----NLKPRQVEVWFQNRRARTKLK 183

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           +     +     L    + L EEN RL K+V +L
Sbjct: 184 QTEVDCEY----LKKCCENLTEENRRLHKEVQEL 213


>gi|242768031|ref|XP_002341487.1| homeobox  transcription factor, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218724683|gb|EED24100.1| homeobox transcription factor, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 725

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 7/83 (8%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 77
           R T EQV+ LE  +   PKP+S ++    RE  + +N+   ++  WFQNRR + KQ+K  
Sbjct: 69  RLTKEQVDTLEAQFQAHPKPNSNKK----RELAVQTNLSLPRVANWFQNRRAKAKQQKRQ 124

Query: 78  -EASRLQAVNRKLTAMNKLLMEE 99
            E  R+Q   ++     K + EE
Sbjct: 125 EEFERMQREAKEKDEQAKPIKEE 147


>gi|358392262|gb|EHK41666.1| hypothetical protein TRIATDRAFT_287108 [Trichoderma atroviride IMI
           206040]
          Length = 842

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 380 KRFRLTHQQTRFLTSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 434

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQ 104
               RL A +R      + + ++ D +Q
Sbjct: 435 ----RLNADDRDRMIKMRAVPDDFDNVQ 458


>gi|242072358|ref|XP_002446115.1| hypothetical protein SORBIDRAFT_06g001940 [Sorghum bicolor]
 gi|241937298|gb|EES10443.1| hypothetical protein SORBIDRAFT_06g001940 [Sorghum bicolor]
          Length = 775

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 26/147 (17%)

Query: 8   GKTGSLDNG----KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           G+  +++NG    +  R+  EQ++ LE  + EC  P    R    RE      IE +Q+K
Sbjct: 45  GEEHNINNGSSSKRSKRFNVEQLQQLESSFQECTHPDDAMR----RELAARVGIETRQVK 100

Query: 64  VWFQNRRCREKQRKEASRLQAVNRKLTAMN----------------KLLMEENDRLQKQV 107
            WFQNRR + K    A   +  +R L A                  K    EN++ ++Q 
Sbjct: 101 FWFQNRRTQTKHSSAAGTAEDGSRALDAAAPALALTLALAAGAAAVKSYATENNKFRQQN 160

Query: 108 SQLVYENGYFRQHTQSTTLATKDTSCE 134
           + L+ EN     H + T    +D + E
Sbjct: 161 ADLLAEN--MELHKELTCSRCRDPTAE 185


>gi|349379|gb|AAA63765.1| HAHB-1 [Helianthus annuus]
          Length = 313

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 8/97 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R   EQV+ L+R +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 92  KKRRLNMEQVKTLQRNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTK 147

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 113
           +      A+ R+  A    +  END LQ Q  +L  E
Sbjct: 148 QLEKDYDALKRQFEA----VKAENDSLQSQNHKLHAE 180


>gi|75131008|sp|Q6YPD0.1|HOX27_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX27; AltName:
           Full=HD-ZIP protein HOX27; AltName: Full=Homeodomain
           transcription factor HOX27; AltName: Full=OsHox27
 gi|46804964|dbj|BAD17827.1| putative homeobox-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|222640698|gb|EEE68830.1| hypothetical protein OsJ_27606 [Oryza sativa Japonica Group]
          Length = 354

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 11/125 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + E    S++  +Q +     L N+ P+Q++VWFQNRR R K +
Sbjct: 174 KKLRLSKEQSAFLEESFKEH---STLNPKQKVALAKQL-NLRPRQVEVWFQNRRARTKLK 229

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
           +     + + R      + L EEN RL K++++L  +     F  H  +TTL+    SCE
Sbjct: 230 QTEVDCEYLKR----CCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMC-PSCE 284

Query: 135 SVVTS 139
            V ++
Sbjct: 285 RVASN 289


>gi|225425754|ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein ATHB-13-like [Vitis
           vinifera]
          Length = 285

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 10/123 (8%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 74  GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 129

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYF--RQHTQSTTLAT 128
            R K ++       + R+  A+      END LQ Q  +L  E      R+ T+S  L  
Sbjct: 130 ARWKTKQLEKDYDLLKRQFEAVKA----ENDALQAQNQKLHAEMLALKSREPTESINLNI 185

Query: 129 KDT 131
           K+T
Sbjct: 186 KET 188


>gi|115475738|ref|NP_001061465.1| Os08g0292000 [Oryza sativa Japonica Group]
 gi|38175461|dbj|BAD01388.1| putative OCL3 protein [Oryza sativa Japonica Group]
 gi|113623434|dbj|BAF23379.1| Os08g0292000 [Oryza sativa Japonica Group]
          Length = 786

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 15/94 (15%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y   T +Q E L R +  CP P     ++L +E     N+   QIK WFQN  CR K +
Sbjct: 64  RYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKEL----NMTETQIKYWFQN--CRTKMK 117

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           K          K     KLL +EN+ L+K+ ++L
Sbjct: 118 K---------FKNNEERKLLQKENEELKKENAEL 142


>gi|266265608|dbj|BAI49293.1| homeodomain leucine zipper protein class 1 [Hordeum vulgare subsp.
           vulgare]
 gi|266265610|dbj|BAI49294.1| homeodomain leucine zipper protein class 1 [Hordeum vulgare subsp.
           vulgare]
 gi|326512624|dbj|BAJ99667.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score = 50.4 bits (119), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 10/83 (12%)

Query: 7   DGKTGSLDNG---KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           DG    +D G   K  R T EQVE LE  + E  K  + R+  L  E      ++PKQ+ 
Sbjct: 45  DGDGVEMDGGGDPKKRRLTDEQVEGLELSFREERKLETGRKVHLAAEL----GLDPKQVA 100

Query: 64  VWFQNRRCREKQR---KEASRLQ 83
           VWFQNRR R K +   +E S+L+
Sbjct: 101 VWFQNRRARHKSKLLEEEFSKLK 123


>gi|293335205|ref|NP_001170401.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
 gi|224035649|gb|ACN36900.1| unknown [Zea mays]
 gi|414589431|tpg|DAA40002.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 283

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQ---QLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           R T EQV  LE  + E  +    +R+   +   E      I P+Q+ VWFQNRR R + +
Sbjct: 93  RLTAEQVRELELSFEEEKRKLEPKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWRSK 152

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++  RL+A +  L A    L+ +NDRL+ QV  L 
Sbjct: 153 QLEQDFDRLRAAHDDLIAGRDALLADNDRLRSQVITLT 190


>gi|414586002|tpg|DAA36573.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 187

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 11/137 (8%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           +DG  G   + K +R + +Q   LE  + E P  +  ++  L ++      + P+Q++VW
Sbjct: 26  EDGGCGIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQKAALAQQL----GLRPRQVEVW 81

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ---LVYENGYFRQHTQ 122
           FQNRR R K ++     + + R      + L EEN RLQK+V +   L   + +   H  
Sbjct: 82  FQNRRARTKLKQTEVDCEYLKR----CCETLTEENRRLQKEVQELRALKLVSPHLYMHMS 137

Query: 123 STTLATKDTSCESVVTS 139
             T  T   SCE V +S
Sbjct: 138 PPTTLTMCPSCERVSSS 154


>gi|222640282|gb|EEE68414.1| hypothetical protein OsJ_26774 [Oryza sativa Japonica Group]
          Length = 922

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 15/94 (15%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y   T +Q E L R +  CP P     ++L +E     N+   QIK WFQN  CR K +
Sbjct: 196 RYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKEL----NMTETQIKYWFQN--CRTKMK 249

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           K          K     KLL +EN+ L+K+ ++L
Sbjct: 250 K---------FKNNEERKLLQKENEELKKENAEL 274


>gi|357486709|ref|XP_003613642.1| Homeobox-leucine zipper protein [Medicago truncatula]
 gi|355514977|gb|AES96600.1| Homeobox-leucine zipper protein [Medicago truncatula]
          Length = 283

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 12/119 (10%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R      N++P+Q+ +WFQNRR
Sbjct: 71  GSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARAL----NLQPRQVAIWFQNRR 126

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTL 126
            R K ++       + R+  A+   N  L  +N +LQ ++  L  +N   R+ T+S  L
Sbjct: 127 ARWKTKQLEKDYDVLKRQYDAIKLDNDALQAQNQKLQAEI--LALKN---REPTESINL 180


>gi|307715374|gb|ADN88094.1| homeodomain-leucine zipper protein HD3 [Gossypium hirsutum]
          Length = 254

 Score = 50.4 bits (119), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 19/123 (15%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 49  KKRRLTSEQVYLLEKSFEAENKLEPERKSQLAKKL----GLQPRQVAVWFQNRRARWKTK 104

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
              ++   L++    L +    +++EN++L+ +V+ L            +  L  KD + 
Sbjct: 105 QLERDYDLLKSSFDSLQSNYDTILKENEKLKSEVASL------------TEKLQAKDVAT 152

Query: 134 ESV 136
           E++
Sbjct: 153 EAI 155


>gi|218200868|gb|EEC83295.1| hypothetical protein OsI_28655 [Oryza sativa Indica Group]
          Length = 790

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 15/94 (15%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y   T +Q E L R +  CP P     ++L +E     N+   QIK WFQN  CR K +
Sbjct: 64  RYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKEL----NMTETQIKYWFQN--CRTKMK 117

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           K          K     KLL +EN+ L+K+ ++L
Sbjct: 118 K---------FKNNEERKLLQKENEELKKENAEL 142


>gi|302771079|ref|XP_002968958.1| hypothetical protein SELMODRAFT_18217 [Selaginella moellendorffii]
 gi|302816653|ref|XP_002990005.1| hypothetical protein SELMODRAFT_18216 [Selaginella moellendorffii]
 gi|300142316|gb|EFJ09018.1| hypothetical protein SELMODRAFT_18216 [Selaginella moellendorffii]
 gi|300163463|gb|EFJ30074.1| hypothetical protein SELMODRAFT_18217 [Selaginella moellendorffii]
          Length = 87

 Score = 50.4 bits (119), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + EQV +LE  +    +   +R+ QL +E      ++P+Q+ VWFQNRR R K +
Sbjct: 6   KKRRLSVEQVRSLELSFETENRLEPVRKMQLAQEL----GLQPRQVAVWFQNRRARWKTK 61

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQ 106
           +    L+     L A  + L EEN RL+ Q
Sbjct: 62  Q----LEKDYDVLKAAYESLAEENKRLKAQ 87


>gi|166754|gb|AAA32816.1| homeobox protein, partial [Arabidopsis thaliana]
          Length = 100

 Score = 50.4 bits (119), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 5   KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 60

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
              ++   L++   +L +    ++ +ND+L+ +V+ L
Sbjct: 61  QLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSL 97


>gi|193237555|dbj|BAG50054.1| transcription factor Homeobox [Lotus japonicus]
          Length = 284

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV  LE+ + E  K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 65  KKRRLTSEQVNLLEKSFEEENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 120

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
              ++   L++    L A    + +EN++L+ +V  L
Sbjct: 121 QLERDYDVLKSSYDSLLATYDTIAKENEKLKSEVVSL 157


>gi|198473929|ref|XP_001356494.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
 gi|198138172|gb|EAL33558.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
          Length = 548

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
           +Q+  L   Y+  P+P ++ ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 84  AVNRK 88
               K
Sbjct: 307 MQQEK 311


>gi|195147414|ref|XP_002014675.1| GL18825 [Drosophila persimilis]
 gi|194106628|gb|EDW28671.1| GL18825 [Drosophila persimilis]
          Length = 550

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
           +Q+  L   Y+  P+P ++ ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 84  AVNRK 88
               K
Sbjct: 307 MQQEK 311


>gi|171687871|ref|XP_001908876.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943897|emb|CAP69549.1| unnamed protein product [Podospora anserina S mat+]
          Length = 646

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 8/101 (7%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R   ++VE LER +++ PKP+S  +++L  +      +E  +I  WFQNRR +EKQ ++ 
Sbjct: 70  RLAKDEVELLEREFNKNPKPNSSTKRELAEQM----GVEVPRINNWFQNRRAKEKQMRKT 125

Query: 80  SRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           +  +A   +    ++ + E  D+ Q  V++     G   QH
Sbjct: 126 AEFEAQQAREKEASE-VKESGDQEQGTVTEFY---GLSNQH 162


>gi|303313929|ref|XP_003066973.1| Homeobox domain containing protein [Coccidioides posadasii C735
           delta SOWgp]
 gi|240106641|gb|EER24828.1| Homeobox domain containing protein [Coccidioides posadasii C735
           delta SOWgp]
          Length = 665

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +N+   ++  WFQNRR +
Sbjct: 70  VENLSRPRLTKEQVETLEAQFRAQPKPTSNVKRQLA----MQTNLTLPRVANWFQNRRAK 125

Query: 73  EKQRK---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
           EKQ+K   E  R+QA+        + +    D  + Q +  V
Sbjct: 126 EKQQKRQEEFKRMQAMKSSENLKREEISSSTDARRTQYADKV 167


>gi|165968273|gb|ABY75946.1| At5g03790 [Arabidopsis thaliana]
          Length = 192

 Score = 50.4 bits (119), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 15/125 (12%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T  Q+ +LER + E  K  S R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 36  KKKRLTSGQLASLERSFQEEDKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWKA- 90

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
                     ++L  +   L +E D + ++   L  E    R   +   L  K  S  ++
Sbjct: 91  ----------KQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTI 140

Query: 137 VTSGQ 141
             SG+
Sbjct: 141 KVSGE 145


>gi|195433046|ref|XP_002064526.1| GK23894 [Drosophila willistoni]
 gi|194160611|gb|EDW75512.1| GK23894 [Drosophila willistoni]
          Length = 539

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
           +Q+  L   Y+  P+P ++ ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 249 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 304

Query: 84  AVNRK 88
               K
Sbjct: 305 MQQEK 309


>gi|356505302|ref|XP_003521430.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Glycine max]
          Length = 218

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 16/141 (11%)

Query: 12  SLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRC 71
           S +  K  R T  Q+E LER + E  K    R+ +L RE      ++P+QI VWFQNRR 
Sbjct: 53  SRNKEKKKRLTNNQIELLERSFQEEIKLDPERKMKLSREL----GLQPRQIAVWFQNRRT 108

Query: 72  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV----SQLVYENGYFRQ----HTQS 123
           R K ++    L+ +   L     ++  E  +LQ++V    + L  E G+ +Q    +T+ 
Sbjct: 109 RWKTKQ----LEHLYDVLKHQYDVVSNEKQKLQEEVMKLKAMLSKEQGFGKQTFGCYTEI 164

Query: 124 TTLATKDTSCESVVTSGQHHL 144
           +   T +++ E +   G+ ++
Sbjct: 165 SGEETVESTSEGLTLRGKSNI 185


>gi|197116169|dbj|BAG68833.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 15/84 (17%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R+T  Q + LE  Y E P P+  +R +L +      N+EPKQ+K WFQN+R + K    +
Sbjct: 48  RHTAYQTQELENFYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNKRNQTK--INS 101

Query: 80  SRLQAVNRKLTAMNKLLMEENDRL 103
            RL+         N  L E++DRL
Sbjct: 102 DRLE---------NITLREDHDRL 116


>gi|9759299|dbj|BAB09805.1| unnamed protein product [Arabidopsis thaliana]
          Length = 225

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 13/136 (9%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           D + GS    K +R + +Q   LE  + E    S++  +Q I     L N+ P+Q++VWF
Sbjct: 71  DDENGS--TRKKLRLSKDQSAFLEDSFKE---HSTLNPKQKIALAKQL-NLRPRQVEVWF 124

Query: 67  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQST 124
           QNRR R K ++     + + R   +    L EEN RLQK+V +L  +  +  F     +T
Sbjct: 125 QNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTLKTSTPFYMQLPAT 180

Query: 125 TLATKDTSCESVVTSG 140
           TL T   SCE V TS 
Sbjct: 181 TL-TMCPSCERVATSA 195


>gi|119173966|ref|XP_001239344.1| hypothetical protein CIMG_08965 [Coccidioides immitis RS]
          Length = 627

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 7/76 (9%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +N+   ++  WFQNRR +
Sbjct: 70  VENLSRPRLTKEQVETLEAQFQAQPKPTSNVKRQLA----MQTNLTLPRVANWFQNRRAK 125

Query: 73  EKQRK---EASRLQAV 85
           EKQ+K   E  R+QA+
Sbjct: 126 EKQQKRQEEFKRMQAM 141


>gi|296815888|ref|XP_002848281.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
 gi|238841306|gb|EEQ30968.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
          Length = 712

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 11/132 (8%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           ++N    R T EQVE LE  +   PKP+S  ++QL     + +++   ++  WFQNRR +
Sbjct: 61  VENLSRPRLTKEQVEILESQFQAHPKPNSNTKRQLA----LQTSLTLPRVANWFQNRRAK 116

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
            KQ+K     +    K+ A  K +  E    Q+Q S+   E     Q  +++ L     +
Sbjct: 117 AKQQKRQEEFE----KMQAKEKAMAAEGSENQQQQSESSDEQQKSEQDQKNSILTNTRGA 172

Query: 133 CESVVTSGQHHL 144
             S    G+H L
Sbjct: 173 TSS---QGEHGL 181


>gi|312379882|gb|EFR26035.1| hypothetical protein AND_08145 [Anopheles darlingi]
          Length = 324

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
           +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 128 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 183

Query: 84  AVNRK 88
               K
Sbjct: 184 MQQEK 188


>gi|356528154|ref|XP_003532670.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 793

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 15/91 (16%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R+  ++V  LE ++ EC  P+ +RR+Q+  E      ++P+Q+K WFQN++         
Sbjct: 23  RHGRDKVARLEEIFKECTHPNEVRRRQIGEEL----GLDPEQVKFWFQNKK--------- 69

Query: 80  SRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           + ++ +N +L      L  EN+R+Q + +++
Sbjct: 70  THIRTINERLDT--DALRLENERIQSENNKM 98


>gi|195386470|ref|XP_002051927.1| GJ24442 [Drosophila virilis]
 gi|194148384|gb|EDW64082.1| GJ24442 [Drosophila virilis]
          Length = 529

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
           +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 84  AVNRK 88
               K
Sbjct: 307 MQQEK 311


>gi|389627356|ref|XP_003711331.1| hypothetical protein MGG_07437 [Magnaporthe oryzae 70-15]
 gi|351643663|gb|EHA51524.1| hypothetical protein MGG_07437 [Magnaporthe oryzae 70-15]
 gi|440469023|gb|ELQ38150.1| hypothetical protein OOU_Y34scaffold00552g105 [Magnaporthe oryzae
           Y34]
 gi|440483170|gb|ELQ63598.1| hypothetical protein OOW_P131scaffold00967g4 [Magnaporthe oryzae
           P131]
          Length = 714

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 226 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 280

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQ 104
               RL A +R      + + ++ D +Q
Sbjct: 281 ----RLTADDRDRMIKMRAVPDDFDNVQ 304


>gi|357476775|ref|XP_003608673.1| Homeobox-leucine zipper protein [Medicago truncatula]
 gi|355509728|gb|AES90870.1| Homeobox-leucine zipper protein [Medicago truncatula]
          Length = 278

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 59/122 (48%), Gaps = 17/122 (13%)

Query: 57  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ---LVYE 113
           + P+Q++VWFQNRR R K ++     + + R      + L EEN RLQK+V +   L   
Sbjct: 154 LRPRQVEVWFQNRRARTKLKQTEVDCEVLKR----CCENLTEENRRLQKEVQELRALKLS 209

Query: 114 NGYFRQHTQSTTLATKDTSCESVVT--------SGQHHLTPQHPPRDASPAGLLSIAEET 165
             ++ Q T  TTL T   SCE V          S +HH   Q  PR A P G  + A   
Sbjct: 210 PQFYMQMTPPTTL-TMCPSCERVAVPSNACVDASNRHHSMAQAHPR-AVPIGPWASAAPP 267

Query: 166 LT 167
           LT
Sbjct: 268 LT 269


>gi|256077688|ref|XP_002575133.1| insulinprotein enhancer protein isl [Schistosoma mansoni]
 gi|353229553|emb|CCD75724.1| putative insulinprotein enhancer protein isl [Schistosoma mansoni]
          Length = 409

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 37/54 (68%), Gaps = 4/54 (7%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
           +Q+  L   Y   P+P ++ ++QL+     ++++ P+ I+VWFQN+RC++K+R+
Sbjct: 150 KQLHTLRTCYAANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKRQ 199


>gi|15227754|ref|NP_179865.1| homeobox-leucine zipper protein HAT9 [Arabidopsis thaliana]
 gi|21264431|sp|P46603.2|HAT9_ARATH RecName: Full=Homeobox-leucine zipper protein HAT9; AltName:
           Full=Homeodomain-leucine zipper protein HAT9;
           Short=HD-ZIP protein 9
 gi|3445197|gb|AAC32427.1| homeodomain transcription factor (HAT9) [Arabidopsis thaliana]
 gi|20197409|gb|AAM15064.1| homeodomain transcription factor (HAT9) [Arabidopsis thaliana]
 gi|110738316|dbj|BAF01086.1| homeobox protein [Arabidopsis thaliana]
 gi|330252262|gb|AEC07356.1| homeobox-leucine zipper protein HAT9 [Arabidopsis thaliana]
          Length = 274

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 11/122 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R T +Q   LE  + +    +  ++Q L R+     N+ P+Q++VWFQNRR R K +
Sbjct: 113 KKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQL----NLRPRQVEVWFQNRRARTKLK 168

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
           +     +     L    + L +EN RLQK++ +L  +     F  H  ++TL TK  SCE
Sbjct: 169 QTEVDCEF----LKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTL-TKCPSCE 223

Query: 135 SV 136
            +
Sbjct: 224 RI 225


>gi|307715372|gb|ADN88093.1| homeodomain-leucine zipper protein HD2 [Gossypium hirsutum]
          Length = 300

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 17/140 (12%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + +Q   LE  + E    +  ++  L ++      + P+Q++VWFQNRR R K +
Sbjct: 141 KKLRLSKDQSAILEESFKENNTLNPKQKMALAKQL----GLRPRQVEVWFQNRRARTKLK 196

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ---LVYENGYFRQHTQSTTLATKDTSC 133
           +     + + R      + L EEN RLQK+V +   L     ++ Q T  TTL T   SC
Sbjct: 197 QTEVDCEFLKR----CCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPTTL-TMCPSC 251

Query: 134 E-----SVVTSGQHHLTPQH 148
           E     S V    HH  PQ+
Sbjct: 252 ERVGASSTVDPRSHHQLPQN 271


>gi|212722080|ref|NP_001132562.1| uncharacterized protein LOC100194027 [Zea mays]
 gi|195644626|gb|ACG41781.1| homeobox-leucine zipper protein HAT14 [Zea mays]
          Length = 333

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 11/122 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 165 KKLRLSKEQSAFLEDSFKEHATLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 220

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGY--FRQHTQSTTLATKDTSCE 134
           +     + + R      + L EEN RLQK++S+L        F  H  +TTL+    SCE
Sbjct: 221 QTEVDCEYLKR----CCETLTEENRRLQKELSELRSLKTVHPFYMHLPATTLSMC-PSCE 275

Query: 135 SV 136
            V
Sbjct: 276 RV 277


>gi|156552953|ref|XP_001603153.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Nasonia
           vitripennis]
          Length = 458

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 8/85 (9%)

Query: 8   GKTGSLDNGKYVR----YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           G  G   +GK  R       +Q+  L   Y   P+P ++ ++QL+     ++ + P+ I+
Sbjct: 226 GHKGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIR 281

Query: 64  VWFQNRRCREKQRKEASRLQAVNRK 88
           VWFQN+RC++K++  A + Q    K
Sbjct: 282 VWFQNKRCKDKKKTIAMKQQMQQEK 306


>gi|380088838|emb|CCC13273.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 724

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 225 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 279

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQ 104
               RL A  R      + + ++ D +Q
Sbjct: 280 ----RLTADERDRVMKMRAVPDDFDNVQ 303


>gi|194694736|gb|ACF81452.1| unknown [Zea mays]
 gi|414885693|tpg|DAA61707.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 333

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 11/122 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 165 KKLRLSKEQSAFLEDSFKEHATLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 220

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGY--FRQHTQSTTLATKDTSCE 134
           +     + + R      + L EEN RLQK++S+L        F  H  +TTL+    SCE
Sbjct: 221 QTEVDCEYLKR----CCETLTEENRRLQKELSELRALKTVHPFYMHLPATTLSMC-PSCE 275

Query: 135 SV 136
            V
Sbjct: 276 RV 277


>gi|549892|gb|AAA56907.1| homeobox protein [Arabidopsis thaliana]
 gi|20145865|emb|CAD29652.1| homeodomain-leucine zipper protein HAT9 [Arabidopsis thaliana]
          Length = 274

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 11/122 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R T +Q   LE  + +    +  ++Q L R+     N+ P+Q++VWFQNRR R K +
Sbjct: 113 KKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQL----NLRPRQVEVWFQNRRARTKLK 168

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
           +     +     L    + L +EN RLQK++ +L  +     F  H  ++TL TK  SCE
Sbjct: 169 QTEVDCEF----LKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTL-TKCPSCE 223

Query: 135 SV 136
            +
Sbjct: 224 RI 225


>gi|212542785|ref|XP_002151547.1| homeobox  transcription factor, putative [Talaromyces marneffei
           ATCC 18224]
 gi|210066454|gb|EEA20547.1| homeobox transcription factor, putative [Talaromyces marneffei ATCC
           18224]
          Length = 727

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 7/83 (8%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 77
           R T EQV+ LE  +   PKP+S ++    RE  + +N+   ++  WFQNRR + KQ+K  
Sbjct: 69  RLTKEQVDTLEAQFQAHPKPNSNKK----RELAVQTNLSLPRVANWFQNRRAKAKQQKRQ 124

Query: 78  -EASRLQAVNRKLTAMNKLLMEE 99
            E  R+Q   ++    +K + +E
Sbjct: 125 EEFERMQREAKEKEDQSKSIKDE 147


>gi|50556204|ref|XP_505510.1| YALI0F16852p [Yarrowia lipolytica]
 gi|49651380|emb|CAG78319.1| YALI0F16852p [Yarrowia lipolytica CLIB122]
          Length = 850

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 4/53 (7%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
            Q+  LE++++E PKP    R +L R+     ++  K I++WFQNRR +EKQ 
Sbjct: 285 HQLRVLEKVFNETPKPCLKTRTELERDL----DLPKKNIQIWFQNRRAKEKQN 333


>gi|113205186|gb|AAT39931.2| Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum]
          Length = 173

 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 8/103 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 73  GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 128

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 113
            R K ++     + + R+  A+      END LQ Q  +L  E
Sbjct: 129 ARWKTKQLEKDYEVLKRQFDAIKA----ENDALQTQNQKLHAE 167


>gi|197116201|dbj|BAG68840.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kawasakiana]
          Length = 690

 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 15/84 (17%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R+T  Q + LE  Y E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 48  RHTAYQTQELENFYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 101

Query: 80  SRLQAVNRKLTAMNKLLMEENDRL 103
            RL+         N  L E++DRL
Sbjct: 102 DRLE---------NITLREDHDRL 116


>gi|3047106|gb|AAC13617.1| Arabidopsis thaliana homeodomain protein AHDP (SP:P93041)
           [Arabidopsis thaliana]
 gi|7267412|emb|CAB80882.1| homeodomain protein AHDP [Arabidopsis thaliana]
          Length = 590

 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 30/237 (12%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           +A L  L+ L P R+   LR+     +G   V + S+  ++      PV        LPS
Sbjct: 221 NAELQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSGGAPV-----IRRLPS 275

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
           G +++    G S +  V+H + +   + ++ RPL  S      +  +A L RQ   +A  
Sbjct: 276 GCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAIL 335

Query: 350 VTQS-------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           ++ S       S+   GR+  ++  L+QR++  F   ++  +   W+ +    +D DV V
Sbjct: 336 ISSSVTSHDNTSITPGGRK--SMLKLAQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVRV 393

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
           +   S D             P     ++ + A+ +     P  L  FLR    R EW
Sbjct: 394 MTRKSVDD------------PGEPPGIVLSAATSVWLPAAPQRLYDFLRNERMRCEW 438


>gi|356567036|ref|XP_003551729.1| PREDICTED: homeobox-leucine zipper protein ATHB-20-like [Glycine
           max]
          Length = 268

 Score = 50.1 bits (118), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 7/94 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R   EQV+ALE+ + +  K    R+ QL +       ++P+Q+ +WFQNRR R K +
Sbjct: 79  KKKRLNLEQVKALEKSFDQGNKLEPERKVQLAKAL----GLQPRQVAIWFQNRRARWKTK 134

Query: 77  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 107
           +     + + ++  A+   N +L   N +LQ ++
Sbjct: 135 QLEKEYEVLKKQFEAVKADNDVLKVRNQKLQAEL 168


>gi|297823473|ref|XP_002879619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325458|gb|EFH55878.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 179

 Score = 50.1 bits (118), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 14/107 (13%)

Query: 15  NGKYVR---YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRC 71
           NGK  R    T EQ++ LE  + E  K +  R+ +L +E      ++P+QI VWFQNR+ 
Sbjct: 68  NGKEKRKKKMTSEQLKFLETSFQEEIKLNPDRKMKLSKEI----GLQPRQIAVWFQNRKA 123

Query: 72  REKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL---VYENG 115
           R K ++     +++ ++   +++    E + LQ++++QL   + ENG
Sbjct: 124 RWKNKQLEHLYESLRQEFDVVSR----EKELLQEELTQLKSMIRENG 166


>gi|342672243|gb|AEL30894.1| STENOFOLIA-like 1 protein [Medicago sativa]
          Length = 353

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)

Query: 22  TPEQVEALERLYHECPK-PSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
           TPEQ+ ALE LY    + PS+++ QQ+  +      IE K +  WFQN + RE+Q++
Sbjct: 96  TPEQLRALEELYRRGTRTPSAVQIQQITAQLRKFGKIEGKNVFYWFQNHKARERQKR 152


>gi|165968265|gb|ABY75942.1| At5g03790 [Arabidopsis thaliana]
 gi|165968271|gb|ABY75945.1| At5g03790 [Arabidopsis thaliana]
          Length = 192

 Score = 49.7 bits (117), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 15/125 (12%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T  Q+ +LER + E  K  S R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 36  KKKRLTSGQLASLERSFQEDIKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWKA- 90

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
                     ++L  +   L +E D + ++   L  E    R   +   L  K  S  ++
Sbjct: 91  ----------KQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTI 140

Query: 137 VTSGQ 141
             SG+
Sbjct: 141 KVSGE 145


>gi|125605524|gb|EAZ44560.1| hypothetical protein OsJ_29180 [Oryza sativa Japonica Group]
          Length = 183

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 8/106 (7%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECP-KPSSIRRQQLIRECPILSNIEPKQIKVW 65
           D +  S    +  R T EQV ALER + E   K    R+ +L R       I P+Q+ VW
Sbjct: 72  DEQGSSSAAARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVW 127

Query: 66  FQNRRCREKQRK---EASRLQAVNRKLTAMNKLLMEENDRLQKQVS 108
           FQNRR R K ++   +  RL+A + +L A    L  +N+ L+ Q S
Sbjct: 128 FQNRRARWKTKQLELDFDRLRAAHDELLAGRTALAADNESLRSQNS 173


>gi|310792453|gb|EFQ27980.1| homeobox domain-containing protein [Glomerella graminicola M1.001]
          Length = 666

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 203 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 257

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQ 104
               RL A +R      + + ++ D +Q
Sbjct: 258 ----RLTADDRDRMIKMRAVPDDFDNIQ 281


>gi|194758653|ref|XP_001961576.1| GF14867 [Drosophila ananassae]
 gi|190615273|gb|EDV30797.1| GF14867 [Drosophila ananassae]
          Length = 550

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
           +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 253 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 308

Query: 84  AVNRK 88
               K
Sbjct: 309 MQQEK 313


>gi|115440077|ref|NP_001044318.1| Os01g0760800 [Oryza sativa Japonica Group]
 gi|31339111|dbj|BAC77162.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113533849|dbj|BAF06232.1| Os01g0760800, partial [Oryza sativa Japonica Group]
          Length = 134

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 18 YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
          Y R+T EQ+  +E L+ E P P   +RQQ+ ++      +  +Q+K WFQNRR + K+R 
Sbjct: 4  YHRHTAEQIRIMEALFKESPHPDERQRQQVSKQL----GLSARQVKFWFQNRRTQIKERH 59

Query: 78 EASRLQAVNRKLTAMNKLLME 98
          E S L++   KL   ++ + E
Sbjct: 60 ENSLLKSELEKLQDEHRAMRE 80


>gi|165968255|gb|ABY75937.1| At5g03790 [Arabidopsis thaliana]
 gi|165968259|gb|ABY75939.1| At5g03790 [Arabidopsis thaliana]
 gi|165968275|gb|ABY75947.1| At5g03790 [Arabidopsis thaliana]
          Length = 192

 Score = 49.7 bits (117), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 15/125 (12%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T  Q+ +LER + E  K  S R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 36  KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWKA- 90

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
                     ++L  +   L +E D + ++   L  E    R   +   L  K  S  ++
Sbjct: 91  ----------KQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTI 140

Query: 137 VTSGQ 141
             SG+
Sbjct: 141 KVSGE 145


>gi|165968253|gb|ABY75936.1| At5g03790 [Arabidopsis thaliana]
 gi|165968261|gb|ABY75940.1| At5g03790 [Arabidopsis thaliana]
 gi|165968263|gb|ABY75941.1| At5g03790 [Arabidopsis thaliana]
 gi|165968267|gb|ABY75943.1| At5g03790 [Arabidopsis thaliana]
 gi|165968269|gb|ABY75944.1| At5g03790 [Arabidopsis thaliana]
 gi|165968279|gb|ABY75949.1| At5g03790 [Arabidopsis thaliana]
          Length = 192

 Score = 49.7 bits (117), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 15/125 (12%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T  Q+ +LER + E  K  S R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 36  KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWKA- 90

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
                     ++L  +   L +E D + ++   L  E    R   +   L  K  S  ++
Sbjct: 91  ----------KQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTI 140

Query: 137 VTSGQ 141
             SG+
Sbjct: 141 KVSGE 145


>gi|197116197|dbj|BAG68838.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. halleri]
          Length = 671

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 15/84 (17%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R+T  Q + LE  Y E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 30  RHTAYQTQELENFYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 83

Query: 80  SRLQAVNRKLTAMNKLLMEENDRL 103
            RL+         N  L E++DRL
Sbjct: 84  DRLE---------NITLREDHDRL 98


>gi|242049450|ref|XP_002462469.1| hypothetical protein SORBIDRAFT_02g026150 [Sorghum bicolor]
 gi|241925846|gb|EER98990.1| hypothetical protein SORBIDRAFT_02g026150 [Sorghum bicolor]
          Length = 369

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 11/125 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 188 KKLRLSKEQSAFLEESFKEHATLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 243

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
           +     + + R      + L EEN RLQK++++L  +     F  H  +TTL+    SCE
Sbjct: 244 QTEVDCEYLKR----CCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMC-PSCE 298

Query: 135 SVVTS 139
            V ++
Sbjct: 299 RVASN 303


>gi|195484275|ref|XP_002090625.1| GE12696 [Drosophila yakuba]
 gi|194176726|gb|EDW90337.1| GE12696 [Drosophila yakuba]
          Length = 540

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
           +Q+  L   Y+  P+P ++ ++QL+     ++++ P+ I+VWFQN+RC++K++    +LQ
Sbjct: 251 KQLHTLRTCYNANPRPDALMKEQLVE----MTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306

Query: 84  AVNRK 88
               K
Sbjct: 307 MQQEK 311


>gi|165968257|gb|ABY75938.1| At5g03790 [Arabidopsis thaliana]
          Length = 192

 Score = 49.7 bits (117), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 15/125 (12%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T  Q+ +LER + E  K  S R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 36  KKKRLTSGQLASLERSFQEEDKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWKA- 90

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
                     ++L  +   L +E D + ++   L  E    R   +   L  K  S  ++
Sbjct: 91  ----------KQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTI 140

Query: 137 VTSGQ 141
             SG+
Sbjct: 141 KISGE 145


>gi|197116171|dbj|BAG68842.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kamchatica]
          Length = 689

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 15/84 (17%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R+T  Q + LE  Y E P P+  +R +L +      N+EPKQ+K WFQN+  R + +  +
Sbjct: 48  RHTAYQTQELENFYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNK--RNQMKINS 101

Query: 80  SRLQAVNRKLTAMNKLLMEENDRL 103
            RL+         N  L E++DRL
Sbjct: 102 DRLE---------NITLREDHDRL 116


>gi|356557110|ref|XP_003546861.1| PREDICTED: homeobox-leucine zipper protein HOX27-like [Glycine max]
          Length = 384

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 12/136 (8%)

Query: 7   DGKTGSLDNG-KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           D   GS  N  K +R + EQ   LE  + E    +  ++  L ++     N++P+Q++VW
Sbjct: 192 DNNNGSGGNTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQL----NLQPRQVEVW 247

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQS 123
           FQNRR R K ++     + + R      + L EEN RL K++ +L  +  +  F     +
Sbjct: 248 FQNRRARTKLKQTEVDCEYLKR----CCETLTEENRRLHKELQELRALKTSNPFYMQLPA 303

Query: 124 TTLATKDTSCESVVTS 139
           TTL T   SCE V T+
Sbjct: 304 TTL-TMCPSCERVATN 318


>gi|1076569|pir||S51929 homeotic protein CHB5 - carrot
          Length = 96

 Score = 49.7 bits (117), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 8/94 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R   EQV+ALE+ +    K    R+ QL R       ++P+QI +WFQNRR R K +
Sbjct: 4   KKRRLNLEQVKALEKSFELGNKLEPERKVQLARAL----GLQPRQIAIWFQNRRARWKTK 59

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           +       + R+  A    L  +ND L+ Q  +L
Sbjct: 60  QLERDYTILKRQFDA----LKADNDSLRTQNKKL 89


>gi|225455262|ref|XP_002271523.1| PREDICTED: homeobox-leucine zipper protein ATHB-12 [Vitis vinifera]
 gi|302143960|emb|CBI23065.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score = 49.7 bits (117), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 77
           R++ EQV+ LE ++    K  + ++++L  E      ++P+Q+ +WFQN+R R K ++  
Sbjct: 28  RFSDEQVQYLESIFESDSKLEARKKEELAVEL----GMQPRQVAIWFQNKRARWKSKQIE 83

Query: 78  -EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
            +   L+A    LT+  + L EE   L  Q+ +L
Sbjct: 84  HDYKALRASYDALTSRFESLKEEKQSLLTQLQKL 117


>gi|116787512|gb|ABK24536.1| unknown [Picea sitchensis]
          Length = 358

 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 12/126 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 198 KKLRLSKEQSAYLEESFKEHNTLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 253

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ---LVYENGYFRQHTQSTTLATKDTSC 133
           +     + + R      + L EEN RLQK + +   L   +  F  H  +TTL T   SC
Sbjct: 254 QTEVDCEYLKR----CYETLTEENRRLQKDIQELRALKVAHPSFYMHLPATTL-TMCPSC 308

Query: 134 ESVVTS 139
           E + ++
Sbjct: 309 ERIASA 314


>gi|358389639|gb|EHK27231.1| hypothetical protein TRIVIDRAFT_117070, partial [Trichoderma virens
           Gv29-8]
          Length = 322

 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 157 KRFRLTHQQTRFLTSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 211

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQ 104
               RL A +R      + + ++ D +Q
Sbjct: 212 ----RLNADDRDRMIKMRAVPDDFDNVQ 235


>gi|86129716|gb|ABC86567.1| homeodomain-leucine zipper transcription factor TaHDZipI-2
           [Triticum aestivum]
          Length = 333

 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 118 KKRRLNVEQVRTLEKNFEVANKLEPERKMQLARAL----GLQPRQVAIWFQNRRARWKTK 173

Query: 77  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 107
           +       + R+  A+   N  L+  N +LQ ++
Sbjct: 174 QLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEI 207


>gi|326493446|dbj|BAJ85184.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 317

 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 14/112 (12%)

Query: 2   AMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQ 61
           AMSC  G       GK  R   EQV ALER +    K    R+ ++ R+      + P+Q
Sbjct: 55  AMSCGLG-------GKKRRLALEQVRALERSFETDNKLDPERKARIARDL----GLHPRQ 103

Query: 62  IKVWFQNRRCREKQR---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           + VWFQNRR R K +   ++ + L+A +  L A    L  + D L  ++ +L
Sbjct: 104 VAVWFQNRRARWKTKQLERDFNALRARHDALRADCDALRRDKDALAAEIHEL 155


>gi|302909385|ref|XP_003050061.1| hypothetical protein NECHADRAFT_49051 [Nectria haematococca mpVI
           77-13-4]
 gi|256730998|gb|EEU44348.1| hypothetical protein NECHADRAFT_49051 [Nectria haematococca mpVI
           77-13-4]
          Length = 449

 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K  
Sbjct: 155 KRFRLTHQQTRFLMSEFAKQPHPDAAHRERLSREIPGLS---PRQVQVWFQNRRAKIK-- 209

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQ 104
               RL A +R      + + E  D +Q
Sbjct: 210 ----RLNADDRDRMIKMRAVPEGFDNVQ 233


>gi|358248872|ref|NP_001240210.1| uncharacterized protein LOC100813420 [Glycine max]
 gi|255635463|gb|ACU18084.1| unknown [Glycine max]
          Length = 284

 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 76
           R + EQV  LE+ + E  K    R+ QL ++      ++P+Q+ VWFQNRR R K +   
Sbjct: 68  RLSSEQVHLLEKSFEEENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTKQLE 123

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           ++   L++    L +    +M+EN++L+ +V  L
Sbjct: 124 RDYDVLKSSYDTLLSSYDSIMKENEKLKSEVVSL 157


>gi|356524118|ref|XP_003530679.1| PREDICTED: homeobox-leucine zipper protein HAT7-like [Glycine max]
          Length = 320

 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 13/130 (10%)

Query: 16  GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 75
           GK  R T +QV+ LE  +    K    R+ QL +E      ++P+Q+ +WFQNRR R K 
Sbjct: 80  GKKRRLTSKQVQFLESNFEVENKLEPERKVQLAKEL----GMQPRQVAIWFQNRRARFKT 135

Query: 76  R---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           +   K+   L+A    L      L++E+D+L+++V+ L        Q  Q+      DTS
Sbjct: 136 KQLEKDYGVLKASYDVLKRDYDNLLQESDKLKEEVNSLKTRLIPREQEEQNLD----DTS 191

Query: 133 CESVVTSGQH 142
           C++V  + QH
Sbjct: 192 CDAV--NSQH 199


>gi|357480751|ref|XP_003610661.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355511996|gb|AES93619.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 735

 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 89/433 (20%), Positives = 159/433 (36%), Gaps = 85/433 (19%)

Query: 241 APARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV-RAEMLPSGYLIRPCEG 299
            P R    +RY  +  DG  VV + SL  +              R    PSG LI     
Sbjct: 369 VPTRQNHFVRYCKLHPDGIWVVADVSLHLLNAASASSSSSSTASRTNRRPSGCLIETLPN 428

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ------LRQMAQEVTQS 353
           G + +  +++++++   V  + +PL  S      K  +A L +       R       + 
Sbjct: 429 GLTKVTWIENVEVDDQVVQNIYKPLVNSGLAFGAKRWVATLHRQSDRLFFRTATNVPREH 488

Query: 354 SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGL 413
            V        ++  L++RL   F+ ++   T   WT +  +G + V V+     D+    
Sbjct: 489 HVRLTPEGKKSILNLAERLVASFSTSIGSSTTHAWTKVPGNGPEVVMVMTKRYIDE---- 544

Query: 414 NLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAAIKV 471
                +      + VL A  S  L  VPP  +  FLR+   R  W     D+ SA  I  
Sbjct: 545 -----SSIDKPVSVVLSAATSFWLP-VPPRRVFDFLRDQNTRKHW-----DILSAGGI-- 591

Query: 472 GPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSG 531
                            +  LAH     +    + L  +  + E++     + L + C+ 
Sbjct: 592 -----------------VHELAHISNGRDSGNYVSLFRI--TSENSEQSDVVVLQENCTD 632

Query: 532 MDENAVGTCAELIFAPI---------DASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           +      T + +++AP+         +   +    LLPSGF I P D       P     
Sbjct: 633 V------TGSYVVYAPVQIPTMHEILNGGDSSRLTLLPSGFAIFP-DGCITNGGP----- 680

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSII-SS 641
               + +G  G               S++T+AF+   +S     +A  +   V ++I ++
Sbjct: 681 ---IMNVGSGG---------------SLVTVAFQIIVDSIPHARLALGSITTVNTLIKNT 722

Query: 642 VQRVALALSPSNI 654
           V+R+  A+ P+ I
Sbjct: 723 VERIRTAVMPNGI 735



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 19/104 (18%)

Query: 21  YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ----- 75
           +T +Q++ ++  + +CP P+  +R    RE  + + ++P QIK WFQNRR   K      
Sbjct: 40  HTQQQIDEMDTFFKQCPNPNDAQR----RELSLRTGLDPTQIKFWFQNRRTSLKHDNVIF 95

Query: 76  ---------RKEA-SRLQAVNRKLTAMNKLLMEENDRLQKQVSQ 109
                    R +A + + A  +     N+LL  EN++L+ ++ +
Sbjct: 96  TVIYIALQWRPDAVANIAATVQTDRDENELLKIENEKLRDELDR 139


>gi|399920241|gb|AFP55588.1| homeobox leucine zipper [Rosa rugosa]
          Length = 216

 Score = 49.7 bits (117), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R++ EQ++ LE ++    K    R+ Q+ RE      ++P+Q+ +WFQNRR R K ++  
Sbjct: 27  RFSDEQIKLLESIFEADSKLEPRRKVQVAREL----GLQPRQVAIWFQNRRARWKSKQIE 82

Query: 80  SRLQAVNRK---LTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTT------LATKD 130
              + +  +   L +  + L EE   L  Q+ +L    G  + H ++         + KD
Sbjct: 83  QDFRTLRNEYDLLASKFESLKEEKQSLLIQLEKLNDLMGKTKVHEENMDGKDLEGSSNKD 142

Query: 131 TSCESVVTSGQH 142
             CE+      H
Sbjct: 143 GDCETTEEKPSH 154


>gi|549893|gb|AAA56908.1| homeobox protein [Arabidopsis thaliana]
          Length = 274

 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 11/122 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R T +Q   LE  + +    +  ++Q L R+     N+ P+Q++VWFQNRR R K +
Sbjct: 113 KKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQL----NLRPRQVEVWFQNRRARTKLK 168

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
           +     +     L    + L +EN RLQK++ +L  +     F  H  ++TL TK  SCE
Sbjct: 169 QTEVDCEF----LKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTL-TKCPSCE 223

Query: 135 SV 136
            +
Sbjct: 224 RI 225


>gi|29028870|gb|AAO64814.1| At5g06710 [Arabidopsis thaliana]
          Length = 336

 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 7/87 (8%)

Query: 56  NIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYE 113
           N+ P+Q++VWFQNRR R K ++     + + R   +    L EEN RLQK+V +L  +  
Sbjct: 225 NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTLKT 280

Query: 114 NGYFRQHTQSTTLATKDTSCESVVTSG 140
           +  F     +TTL T   SCE V TS 
Sbjct: 281 STPFYMQLPATTL-TMCPSCERVATSA 306


>gi|47225657|emb|CAG08000.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 363

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 27/155 (17%)

Query: 22  TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 80
           T +Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 140 TAKQLETLKSAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 195

Query: 81  R------LQAVNR--------KLTAMNKLLMEEND---RLQKQVSQLVYENGYFRQHTQS 123
           R       ++V R        K ++ +   + +++   R  + +S L + NG +      
Sbjct: 196 RHRWTQFYKSVKRSRGGTKVEKESSADDAGLSDSELSFRDDQVLSDLGHTNGLYGS-VGD 254

Query: 124 TTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGL 158
            T +T      SV  SGQ    P H  R  SP GL
Sbjct: 255 VTSSTVLNGGFSVDASGQ----PYHDIRAGSPYGL 285


>gi|357153850|ref|XP_003576587.1| PREDICTED: homeobox-leucine zipper protein HOX11-like [Brachypodium
           distachyon]
          Length = 336

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 11/122 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + E    S++  +Q +     L N+ P+Q++VWFQNRR R K +
Sbjct: 176 KKLRLSKEQAAFLEESFKEH---STLNPKQKVALAKQL-NLLPRQVEVWFQNRRARTKLK 231

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
           +     + + R      + L EEN RLQK++++L  +     F  H  +TTL+    SCE
Sbjct: 232 QTEVDCEYLKR----CCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMC-PSCE 286

Query: 135 SV 136
            V
Sbjct: 287 RV 288


>gi|1708565|sp|P53409.1|ISL3_ONCTS RecName: Full=Insulin gene enhancer protein ISL-3; Short=Islet-3
          Length = 363

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 36/53 (67%), Gaps = 4/53 (7%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Q+  L   Y+  P+P ++ R+QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 201 KQLHTLRTCYNANPRPDALMREQLVE----MTGLSPRVIRVWFQNKRCKDKKR 249


>gi|15232122|ref|NP_186796.1| homeobox-leucine zipper protein HAT5 [Arabidopsis thaliana]
 gi|399900|sp|Q02283.1|HAT5_ARATH RecName: Full=Homeobox-leucine zipper protein HAT5; AltName:
           Full=HD-ZIP protein ATHB-1; AltName: Full=Homeodomain
           transcription factor ATHB-1; AltName:
           Full=Homeodomain-leucine zipper protein HAT5;
           Short=HD-ZIP protein 5
 gi|6016706|gb|AAF01532.1|AC009325_2 homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5) (HD-ZIP
           protein ATHB-1) [Arabidopsis thaliana]
 gi|16329|emb|CAA41625.1| Athb-1 protein [Arabidopsis thaliana]
 gi|16648822|gb|AAL25601.1| AT3g01470/F4P13_2 [Arabidopsis thaliana]
 gi|20466121|gb|AAM19982.1| AT3g01470/F4P13_2 [Arabidopsis thaliana]
 gi|332640149|gb|AEE73670.1| homeobox-leucine zipper protein HAT5 [Arabidopsis thaliana]
          Length = 272

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 68  KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 123

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++   L++   +L +    ++ +ND+L+ +V+ L 
Sbjct: 124 QLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLT 161


>gi|47225812|emb|CAF98292.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 360

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 4/55 (7%)

Query: 22  TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           T +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ ++VWFQN+RC++K+R
Sbjct: 199 TEKQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVVRVWFQNKRCKDKKR 249


>gi|157119485|ref|XP_001653405.1| insulinprotein enhancer protein isl [Aedes aegypti]
 gi|108883188|gb|EAT47413.1| AAEL001500-PA, partial [Aedes aegypti]
          Length = 398

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
           +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 211 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 266

Query: 84  AVNRK 88
               K
Sbjct: 267 MQQEK 271


>gi|302398823|gb|ADL36706.1| HD domain class transcription factor [Malus x domestica]
          Length = 289

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 11/126 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R T EQ   LE  + +    +  ++Q L R+     N+ P+Q++VWFQNRR R K +
Sbjct: 145 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQL----NLRPRQVEVWFQNRRARTKLK 200

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
           +     +     L    + L +EN RLQK++ +L  +  N     H  + TL T   SCE
Sbjct: 201 QTEVDCEF----LKKCCETLTDENRRLQKELQELKALKLNQPLYMHMPTATL-TMCPSCE 255

Query: 135 SVVTSG 140
            +  +G
Sbjct: 256 RIGGAG 261


>gi|109510355|ref|XP_001077477.1| PREDICTED: rhox homeobox family member 1-like [Rattus norvegicus]
 gi|293351182|ref|XP_002727720.1| PREDICTED: rhox homeobox family member 1-like [Rattus norvegicus]
          Length = 199

 Score = 49.3 bits (116), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 41/63 (65%), Gaps = 4/63 (6%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           + +++TPEQ+  L+R++ E   P +++R++L +    L N+E   +K+WF  RR + ++ 
Sbjct: 92  RKLKFTPEQLLELDRVFEETQYPDALQRKELAK----LINVEEYTVKIWFNKRRAKIRKH 147

Query: 77  KEA 79
           ++A
Sbjct: 148 QKA 150


>gi|356531784|ref|XP_003534456.1| PREDICTED: homeobox-leucine zipper protein HAT7-like [Glycine max]
          Length = 270

 Score = 49.3 bits (116), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R   EQV+ALE+ +    K    R+ QL +       ++P+Q+ +WFQNRR R K +
Sbjct: 80  KKKRLNLEQVKALEKSFDLGNKLEPERKVQLAKAL----GLQPRQVAIWFQNRRARWKTK 135

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
              KE   L+     + A N +L  EN +LQ ++
Sbjct: 136 HLEKEYEVLKKQFEAVKADNDVLKVENQKLQAEL 169


>gi|326492792|dbj|BAJ90252.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326496989|dbj|BAJ98521.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326504248|dbj|BAJ90956.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326528853|dbj|BAJ97448.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 331

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 117 KKRRLNVEQVRTLEKNFEVANKLEPERKMQLARAL----GLQPRQVAIWFQNRRARWKTK 172

Query: 77  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 107
           +       + R+  A+   N  L+  N +LQ ++
Sbjct: 173 QLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEI 206


>gi|312282149|dbj|BAJ33940.1| unnamed protein product [Thellungiella halophila]
 gi|312283511|dbj|BAJ34621.1| unnamed protein product [Thellungiella halophila]
          Length = 274

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV  LE+ + +  K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 65  KKRRLTTEQVHLLEKSFEKENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 120

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++   L++   +L +    +++END L+ Q++ L 
Sbjct: 121 QLERDFDLLKSTYDQLLSNYDSIVKENDLLRSQMASLA 158


>gi|7415624|dbj|BAA93465.1| homeobox protein PpHB6 [Physcomitrella patens]
          Length = 345

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 7/107 (6%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           D   G+    K  R T +QV +LER +    K    R+ QL +E      + P+Q+ VWF
Sbjct: 89  DDSQGASQLEKKRRLTFDQVRSLERNFEMENKLEPERKMQLAKEL----GLRPRQVAVWF 144

Query: 67  QNRRCREKQR---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           QNRR R K +   ++   L A  + L     L++ E + L+ +V +L
Sbjct: 145 QNRRARWKTKQLERDYEALAADYKSLKHDYDLVLAEKNNLKAEVQRL 191


>gi|410908008|ref|XP_003967483.1| PREDICTED: insulin gene enhancer protein ISL-2A-like [Takifugu
           rubripes]
          Length = 359

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 4/55 (7%)

Query: 22  TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           T +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ ++VWFQN+RC++K+R
Sbjct: 199 TEKQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVVRVWFQNKRCKDKKR 249


>gi|158338250|ref|YP_001519427.1| hypothetical protein AM1_5146 [Acaryochloris marina MBIC11017]
 gi|158308491|gb|ABW30108.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 157

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 1/139 (0%)

Query: 676 ICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETT 735
           +  SY+ + G  L   +   +E I  +L+H +  ++    +  PV  + NQ  LD+ ETT
Sbjct: 20  LIKSYQHWTGKPLTGDAPSPAE-IAHDLFHASFVLLSHGTETDPVLNYGNQPALDLWETT 78

Query: 736 LVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVL 795
              L  +      + H R++      Q  QQ +     GI +S+ GR      A  W + 
Sbjct: 79  WPELTAMPSRLTAEPHERQSRTQLLHQAAQQHYIQNYQGIRISTTGRRFRISNAEIWDIW 138

Query: 796 NEEETAHCICFMFINWSFV 814
           +E+E        F +W ++
Sbjct: 139 DEQEQKCGQAAKFSHWEWL 157


>gi|119495872|ref|XP_001264712.1| homeobox transcription factor, putative [Neosartorya fischeri NRRL
           181]
 gi|119412874|gb|EAW22815.1| homeobox transcription factor, putative [Neosartorya fischeri NRRL
           181]
          Length = 697

 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 9/112 (8%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  WFQNRR + KQ+K  
Sbjct: 71  RLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANWFQNRRAKAKQQKRQ 126

Query: 80  SRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDT 131
              + + +      K   EE  R +   +    ++    + T+  T  T DT
Sbjct: 127 EEFERMQKA-----KAEAEEAVRNKADSADDTSDSNQSDKTTKEETDKTNDT 173


>gi|328707559|ref|XP_001944557.2| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
           [Acyrthosiphon pisum]
          Length = 513

 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 4/65 (6%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
           +Q+  L   Y   P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K+R  A + Q
Sbjct: 333 KQLHTLRTCYSANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKRAIALKQQ 388

Query: 84  AVNRK 88
               K
Sbjct: 389 IQQDK 393


>gi|322692435|gb|EFY84346.1| homeobox transcription factor, putative [Metarhizium acridum CQMa
           102]
          Length = 295

 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 3/59 (5%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 75
           K  R TP+Q   L   + + P P +  R++L RE P LS   P+Q++VWFQNRR + K+
Sbjct: 175 KRFRLTPQQTRFLMGEFAKQPHPDATLRERLSREIPGLS---PRQVQVWFQNRRAKMKR 230


>gi|357129503|ref|XP_003566401.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Brachypodium distachyon]
          Length = 375

 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R+  EQ++ LE ++ +CP P    R  L +       +   Q+K WFQNRR  +K + E 
Sbjct: 70  RHRREQIQQLEAVFQQCPHPDEQLRLDLSKRL----GMGLLQVKFWFQNRRSAKKNKME- 124

Query: 80  SRLQAVNRKLTAMNKLLMEENDRLQKQV 107
              Q   +KL   N++L+ EN  ++ ++
Sbjct: 125 ---QQEGKKLREENEMLLAENKAMKAEI 149


>gi|165968277|gb|ABY75948.1| At5g03790 [Arabidopsis thaliana]
          Length = 192

 Score = 49.3 bits (116), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 15/125 (12%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T  Q+ +LER + E  K  S R+ +L RE      ++P+QI VWFQNRR R K  
Sbjct: 36  KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWKA- 90

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
                     ++L  +   L +E D + ++   L  E    R   +   L  K  S  ++
Sbjct: 91  ----------KQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTI 140

Query: 137 VTSGQ 141
             SG+
Sbjct: 141 KISGE 145


>gi|168033004|ref|XP_001769007.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679762|gb|EDQ66205.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 345

 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 7/107 (6%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           D   G+    K  R T +QV +LER +    K    R+ QL +E      + P+Q+ VWF
Sbjct: 89  DDSQGASQLEKKRRLTFDQVRSLERNFEMENKLEPERKMQLAKEL----GLRPRQVAVWF 144

Query: 67  QNRRCREKQR---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           QNRR R K +   ++   L A  + L     L++ E + L+ +V +L
Sbjct: 145 QNRRARWKTKQLERDYEALAADYKSLKHDYDLVLAEKNNLKAEVQRL 191


>gi|49659433|dbj|BAD27255.1| SlHDL2 [Silene latifolia]
          Length = 216

 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 13/147 (8%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           D + G  ++ K +R T +Q   LE  + E    +  ++  L +       + P+Q++VWF
Sbjct: 46  DDEDGGDNSRKKLRLTKDQSAILEDSFKEHNTLNPKQKLALAKRL----GLGPRQVEVWF 101

Query: 67  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ---LVYENGYFRQHTQS 123
           QNRR R K ++     + + R      + L EEN RLQK+V +   L     ++ Q T  
Sbjct: 102 QNRRARTKLKQTEVDCEFLKR----CCEQLTEENRRLQKEVQELRTLKLSPQFYMQMTPP 157

Query: 124 TTLATKDTSCESVVTSGQHHLTPQ-HP 149
           TTL T   SCE V       + P+ HP
Sbjct: 158 TTL-TMCPSCERVAAPPSGPVQPKPHP 183


>gi|145354375|ref|NP_195392.2| homeobox protein 40 [Arabidopsis thaliana]
 gi|322510138|sp|O23208.3|ATB40_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-40; AltName:
           Full=HD-ZIP protein ATHB-40; AltName: Full=Homeodomain
           transcription factor ATHB-40
 gi|332661296|gb|AEE86696.1| homeobox protein 40 [Arabidopsis thaliana]
          Length = 216

 Score = 49.3 bits (116), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 12/107 (11%)

Query: 8   GKTGSLDNG----KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           G   S D G    +  + T EQV  LE  + +  K  S R+ +L  E      ++P+Q+ 
Sbjct: 42  GSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAEL----GLDPRQVA 97

Query: 64  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           VWFQNRR R K +    RL+    KL   +  ++ +  RL+ +V QL
Sbjct: 98  VWFQNRRARWKNK----RLEEEYNKLKNSHDNVVVDKCRLESEVIQL 140


>gi|4006894|emb|CAB16824.1| homeodomain protein [Arabidopsis thaliana]
 gi|7270622|emb|CAB80340.1| homeodomain protein [Arabidopsis thaliana]
          Length = 217

 Score = 49.3 bits (116), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 12/107 (11%)

Query: 8   GKTGSLDNG----KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           G   S D G    +  + T EQV  LE  + +  K  S R+ +L  E      ++P+Q+ 
Sbjct: 43  GSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAEL----GLDPRQVA 98

Query: 64  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           VWFQNRR R K +    RL+    KL   +  ++ +  RL+ +V QL
Sbjct: 99  VWFQNRRARWKNK----RLEEEYNKLKNSHDNVVVDKCRLESEVIQL 141


>gi|356502193|ref|XP_003519905.1| PREDICTED: homeobox-leucine zipper protein ATHB-40-like [Glycine
           max]
          Length = 212

 Score = 49.3 bits (116), Expect = 0.009,   Method: Composition-based stats.
 Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 10/106 (9%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           + G+ G++   K  + T EQ+  LER +    K  S R+ QL  E     +++P+Q+ VW
Sbjct: 44  RGGENGTIITKKR-KLTVEQISLLERNFSNEHKLESERKDQLALEL----SLDPRQVAVW 98

Query: 66  FQNRRCREKQRK---EASRLQAVNRKLTAMNKLLME-ENDRLQKQV 107
           FQNRR R K +K   E S L+ V+ + T ++K  +E E  +L++Q+
Sbjct: 99  FQNRRSRWKTQKLEEEYSNLKNVH-ETTMLDKCHLENEVLKLKEQL 143


>gi|301119629|ref|XP_002907542.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262106054|gb|EEY64106.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 240

 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 8/92 (8%)

Query: 243 ARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGS 302
            R+F ++ Y + LEDG +V+  RS+    N   + P+  +VRA +  SGY+I   +   S
Sbjct: 140 GREFLVVTYATTLEDGRVVIATRSV----NVAEVAPLDGYVRAHIYISGYIIEELKEDNS 195

Query: 303 ----IIHIVDHMDLEPWSVPEVLRPLYESSTV 330
               ++ ++ H DL  +  P ++  L  SSTV
Sbjct: 196 NVYCVVTLLAHADLAGYIPPSIINMLGTSSTV 227


>gi|359496307|ref|XP_003635205.1| PREDICTED: homeobox-leucine zipper protein HAT4-like isoform 2
           [Vitis vinifera]
          Length = 289

 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 15/143 (10%)

Query: 1   MAMSCKDGKTGSLDNG---KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNI 57
           M  +C  G +   D     K +R + +Q   LE  + E    +  ++  L ++     N+
Sbjct: 112 MERACSRGISDEEDGDTSRKKLRLSKDQSAILEENFKEHNTLNPKQKLALAKQL----NL 167

Query: 58  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ---LVYEN 114
            P+Q++VWFQNRR R K ++     + + R      + L EEN RLQK+V++   L    
Sbjct: 168 RPRQVEVWFQNRRARTKLKQTEVDCEFLKR----CCENLTEENRRLQKEVNELRALKLSP 223

Query: 115 GYFRQHTQSTTLATKDTSCESVV 137
            ++ Q T  TTL T   SCE V 
Sbjct: 224 QFYMQMTPPTTL-TMCPSCERVA 245


>gi|297828213|ref|XP_002881989.1| hypothetical protein ARALYDRAFT_483619 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327828|gb|EFH58248.1| hypothetical protein ARALYDRAFT_483619 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 315

 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 10/126 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + E    +  ++  L ++     N+  +Q++VWFQNRR R K +
Sbjct: 162 KKLRLSKEQALVLEETFKEHSTLNPKQKLALAKQL----NLRARQVEVWFQNRRARTKLK 217

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
           +     + + R   +    L EEN RLQK+VS+L  +  + +   H    T  T   SCE
Sbjct: 218 QTEVDCEYLKRCCDS----LTEENRRLQKEVSELRALKLSPHLYMHMTPPTTLTMCPSCE 273

Query: 135 SVVTSG 140
            V +S 
Sbjct: 274 RVSSSA 279


>gi|428225485|ref|YP_007109582.1| MEKHLA domain-containing protein [Geitlerinema sp. PCC 7407]
 gi|427985386|gb|AFY66530.1| MEKHLA domain protein [Geitlerinema sp. PCC 7407]
          Length = 171

 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 1/148 (0%)

Query: 667 PEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQ 726
           PE +     +  SYR ++G DL+    +      + L+     V+    +A P+F + NQ
Sbjct: 14  PEVVAWTEHLLRSYRRWVGRDLMAPQKDAIAQS-QALFLAPFVVVSHGTQASPIFNYGNQ 72

Query: 727 AGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSY 786
             LD+ E        +   +  +   R           +QGF     GI ++  GR    
Sbjct: 73  TALDLWEVPWEDFVQMPSNQSVEPDRRAERQQMLEACQKQGFFENYRGIRVTRTGRRFGI 132

Query: 787 ERAVAWKVLNEEETAHCICFMFINWSFV 814
           ER + W V++E          F NW+F+
Sbjct: 133 ERVLIWNVVDEGGDRLGQAATFANWTFL 160


>gi|48057626|gb|AAT39949.1| Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum]
          Length = 171

 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 80  GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 135

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
            R K ++     + + R+  A    +  END LQ Q  +L
Sbjct: 136 ARWKTKQLEKDYEVLKRQFDA----IKAENDALQTQNQKL 171


>gi|326527745|dbj|BAK08147.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 292

 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M    GK G +   +  R++ EQ+++LE ++    K    ++ QL RE      ++P+Q+
Sbjct: 54  MEPASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLAREL----GLQPRQV 109

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
            +WFQN+R R K ++   +  A+     A    L+   D+L+K    LV
Sbjct: 110 AIWFQNKRARWKSKQLERQYAALRDDYDA----LLSSYDQLKKDKQALV 154


>gi|140052423|gb|ABE80119.2| Homeodomain-related [Medicago truncatula]
          Length = 142

 Score = 49.3 bits (116), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 8/91 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQ+E+LE  + E  K    R+ +L +E      ++P+QI +WFQNRR R K +
Sbjct: 59  KKKRLTSEQMESLESSFQEEIKLDPQRKMKLSKEL----GLQPRQIAIWFQNRRARWKTK 114

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
           +    L+ +   L    +++ +E  +LQ +V
Sbjct: 115 Q----LEHLYDSLRHQFEVVSKEKQQLQDEV 141


>gi|70995333|ref|XP_752424.1| homeobox  transcription factor [Aspergillus fumigatus Af293]
 gi|66850059|gb|EAL90386.1| homeobox transcription factor, putative [Aspergillus fumigatus
           Af293]
 gi|159131178|gb|EDP56291.1| homeobox transcription factor, putative [Aspergillus fumigatus
           A1163]
          Length = 697

 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 7/67 (10%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 77
           R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  WFQNRR + KQ+K  
Sbjct: 71  RLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANWFQNRRAKAKQQKRQ 126

Query: 78  -EASRLQ 83
            E  R+Q
Sbjct: 127 EEFERMQ 133


>gi|302398833|gb|ADL36711.1| HD domain class transcription factor [Malus x domestica]
          Length = 286

 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 7/100 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 75  GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 130

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 107
            R K ++       + R+  A+   N  L  +N +LQ ++
Sbjct: 131 ARWKTKQLEKDYDLLKRQFDAIKADNDALQSQNQKLQAEI 170


>gi|197116167|dbj|BAG68832.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 15/84 (17%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R+T  Q + LE  Y E P P+  +R +L +      N+EPKQ+K WFQN+R + K    +
Sbjct: 37  RHTAYQTQELENFYLENPLPTEDQRYELGQRL----NMEPKQVKFWFQNKRNQIK--INS 90

Query: 80  SRLQAVNRKLTAMNKLLMEENDRL 103
            RL+         N  L E++DRL
Sbjct: 91  DRLE---------NITLREDHDRL 105


>gi|147771542|emb|CAN73658.1| hypothetical protein VITISV_036092 [Vitis vinifera]
          Length = 284

 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 18/136 (13%)

Query: 17  KYVRYTPEQVEALERLYHE----CPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           K +R + EQ   LE  + E     PK      +QL        N+ P+Q++VWFQNRR R
Sbjct: 137 KKLRLSKEQSAILEETFKEHNTLNPKQKLALAKQL--------NLRPRQVEVWFQNRRAR 188

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKD 130
            K ++     + + R      + L EEN RLQK+V +L  +  +     H    T  T  
Sbjct: 189 TKLKQTEVDCEYLKR----CCENLTEENRRLQKEVQELRTLKLSPQLYMHMNPPTTLTMC 244

Query: 131 TSCESVVTSGQHHLTP 146
            SCE V  +    + P
Sbjct: 245 PSCERVAVAPSFPIGP 260


>gi|79324931|ref|NP_001031550.1| homeobox-leucine zipper protein ATHB-7 [Arabidopsis thaliana]
 gi|330255646|gb|AEC10740.1| homeobox-leucine zipper protein ATHB-7 [Arabidopsis thaliana]
          Length = 256

 Score = 48.9 bits (115), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 15/157 (9%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           ++ K  K  + +     R++ EQ+++LE ++    +    ++ QL RE      ++P+Q+
Sbjct: 18  LTMKKMKKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLAREL----GLQPRQV 73

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
            +WFQN+R R K ++  +    + +        L  + + L+K+   LV E    ++ TQ
Sbjct: 74  AIWFQNKRARWKSKQLETEYNILRQNYDN----LASQFESLKKEKQALVSER--LKEATQ 127

Query: 123 STTLATKDTSCES----VVTSGQHHLTPQHPPRDASP 155
             T   ++  C      V  S  HH +     R   P
Sbjct: 128 KKT-QEEERQCSGDQAVVALSSTHHESENEENRRRKP 163


>gi|75115970|sp|Q67UE2.1|HOX11_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX11; AltName:
           Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain
           transcription factor HOX11; AltName: Full=OsHox11
 gi|51536105|dbj|BAD38229.1| putative homeodomain leucine zipper protein CPHB-3 [Oryza sativa
           Japonica Group]
          Length = 362

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 11/122 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 177 KKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 232

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
           +     + + R      + L EEN RLQK++++L  +     F  H  +TTL+    SCE
Sbjct: 233 QTEVDCEYLKR----CCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMC-PSCE 287

Query: 135 SV 136
            V
Sbjct: 288 RV 289


>gi|328707561|ref|XP_003243430.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
           [Acyrthosiphon pisum]
          Length = 487

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 4/65 (6%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
           +Q+  L   Y   P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K+R  A + Q
Sbjct: 307 KQLHTLRTCYSANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKRAIALKQQ 362

Query: 84  AVNRK 88
               K
Sbjct: 363 IQQDK 367


>gi|125605887|gb|EAZ44923.1| hypothetical protein OsJ_29564 [Oryza sativa Japonica Group]
          Length = 362

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 11/122 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 177 KKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 232

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
           +     + + R      + L EEN RLQK++++L  +     F  H  +TTL+    SCE
Sbjct: 233 QTEVDCEYLKR----CCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMC-PSCE 287

Query: 135 SV 136
            V
Sbjct: 288 RV 289


>gi|356533426|ref|XP_003535265.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Glycine max]
          Length = 225

 Score = 48.9 bits (115), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 18/127 (14%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +Q+++LE  + +  K    R+ +L +E      ++P+QI VWFQNRR R K +
Sbjct: 57  KKKRLTSDQLDSLENSFQKEIKLDPDRKMKLSKEL----GLQPRQIAVWFQNRRARWKNK 112

Query: 77  KE--------------ASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           +               +   Q +  ++  +  +L E+  R Q+QVS    E    ++  +
Sbjct: 113 QLEHLYDSLKQEFDVISKEKQKLGEEVMKLKTMLREQASRTQQQVSTGYTEISGDQETVE 172

Query: 123 STTLATK 129
           ST+ A +
Sbjct: 173 STSEALR 179


>gi|255588212|ref|XP_002534537.1| Homeobox-leucine zipper protein HAT14, putative [Ricinus communis]
 gi|223525092|gb|EEF27847.1| Homeobox-leucine zipper protein HAT14, putative [Ricinus communis]
          Length = 368

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 20/146 (13%)

Query: 3   MSCKDGKTGSL------DNG---KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPI 53
           M C + + GS       +NG   K +R + EQ   LE  + E    +  ++  L ++   
Sbjct: 163 MECFEAERGSSRASDDDENGLTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQL-- 220

Query: 54  LSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--V 111
             N+ P+Q++VWFQNRR R K ++     + + R      ++L EEN RLQK++ +L  +
Sbjct: 221 --NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR----CCEMLTEENRRLQKELQELRAL 274

Query: 112 YENGYFRQHTQSTTLATKDTSCESVV 137
             +  F     +TTL T   SCE V 
Sbjct: 275 KTSQPFYMQLPATTL-TMCPSCERVA 299


>gi|158299279|ref|XP_319393.4| AGAP010209-PA [Anopheles gambiae str. PEST]
 gi|157014289|gb|EAA13793.5| AGAP010209-PA [Anopheles gambiae str. PEST]
          Length = 451

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
           +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 254 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 309

Query: 84  AVNRK 88
               K
Sbjct: 310 MQQEK 314


>gi|18034441|gb|AAL57495.1|AF443621_1 homeodomain leucine zipper protein CPHB-5 [Craterostigma
           plantagineum]
          Length = 285

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 21/165 (12%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV  LE+ +    K    R+ +L ++      ++P+Q+ +WFQNRR R K +
Sbjct: 73  KKRRLTAEQVHLLEKSFEAENKLEPERKAELAKKL----GLQPRQVAIWFQNRRARWKTK 128

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
              ++  +L++    L +    + +END+L+ ++  L            +  L  KD   
Sbjct: 129 QLERDYDKLKSSYDSLLSTYDSIRQENDKLKAELLSL------------NEKLQPKDDDD 176

Query: 134 ESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAV 178
            S       +L+   PP DA+    L +  +      + + G+AV
Sbjct: 177 PSAEIG--RNLSSSSPPVDAAEPPCLKLTVKVEDRLSTGSNGSAV 219


>gi|224111264|ref|XP_002315797.1| predicted protein [Populus trichocarpa]
 gi|222864837|gb|EEF01968.1| predicted protein [Populus trichocarpa]
          Length = 296

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 8/103 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 75  GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 130

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 113
            R K ++       + R+  A+      END LQ Q  +L  E
Sbjct: 131 ARWKTKQLEKDYDLLKRQFDAIKA----ENDALQAQNQKLHAE 169


>gi|209171591|gb|ACI42916.1| tendril-less [Vicia sativa]
          Length = 237

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 15/89 (16%)

Query: 22  TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASR 81
           T  QV+ALER +HE  K    R+ +L  E      ++P+Q+ VWFQNRR R K       
Sbjct: 78  TSNQVDALERSFHEEIKLDPERKMKLSAEL----GLQPRQVAVWFQNRRTRWK------- 126

Query: 82  LQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
                ++L     +L +EN +LQ +V  L
Sbjct: 127 ----TKQLEQDYDVLKQENQKLQDEVMTL 151


>gi|37909278|gb|AAP37131.1| WOX2 protein [Arabidopsis thaliana]
          Length = 260

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 22 TPEQVEALERLYHECPK-PSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEAS 80
          T +Q+  LE LY E  + PS+ + QQ+        +IE K +  WFQN + R++Q+++  
Sbjct: 18 TKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQKQKQE 77

Query: 81 RLQAVNRKLTAMNKLL 96
          R+   NR L   ++  
Sbjct: 78 RMAYFNRLLHKTSRFF 93


>gi|326516528|dbj|BAJ92419.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 289

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M    GK G +   +  R++ EQ+++LE ++    K    ++ QL RE      ++P+Q+
Sbjct: 51  MEPASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLAREL----GLQPRQV 106

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
            +WFQN+R R K ++   +  A+     A    L+   D+L+K    LV
Sbjct: 107 AIWFQNKRARWKSKQLERQYAALRDDYDA----LLSSYDQLKKDKQALV 151


>gi|225452490|ref|XP_002278872.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Vitis
           vinifera]
          Length = 273

 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 65  KKRRLTPEQVHLLEKSFEAENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 120

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++   L++    L +    +++E ++L+ +V  L 
Sbjct: 121 QLERDYDLLKSSYDSLVSEYDSILKEKEKLKSEVVSLT 158


>gi|345195192|tpg|DAA34961.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414587883|tpg|DAA38454.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 707

 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 194/522 (37%), Gaps = 143/522 (27%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---R 76
           R+T +Q++ LE  +  C  P+   RQ+L  +    + +E +Q+K       C ++    R
Sbjct: 74  RFTMDQIQQLEAQFRVCRHPNLDARQELAAK----TGLEERQVKA------CGDENKGIR 123

Query: 77  KEASRLQAVNRKL---------------------TAMNKLLMEENDRLQKQ-VSQLVYEN 114
           +E  +L+A N +L                     T+  + L+ EN RL+ + V    Y +
Sbjct: 124 QELGKLKAENEELKQRMLNPICFRCRNPTLATQPTSEKRRLLNENARLRDEYVRAKAYLD 183

Query: 115 GYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKAT 174
              R+  +                S   HL           A L+S AE  + E +  AT
Sbjct: 184 RLIREGAE-----------RRASPSAHLHL--------GGSATLVSHAERAMEELVMLAT 224

Query: 175 GTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEIL---KDRPRGS 231
                W  +P M           ++H    V     GL+GL P    E      D  RG+
Sbjct: 225 KGEPMW--LPAMDGE-------TLNHQ-EYVLQTFPGLLGLCPPGFVEEATRESDTIRGT 274

Query: 232 AILYALTTLAPAR---------------DFWL------------LRYTSVLEDGSLVVCE 264
           A +Y ++ L  A                + W+            LR++  L +    + +
Sbjct: 275 A-MYLVSVLTDANQWCEMFPGTVAYMDAELWVQSPRLLNRSVKFLRFSKKLSNRRWAMAD 333

Query: 265 RSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPL 324
            S+ +   G  + P        +LPSG L+    GG   +  V H + +  SVP + RP 
Sbjct: 334 VSVVDGVCG--VEPGGSSTGCRLLPSGCLLEDMSGGYCKVTWVVHAEYDETSVPSLFRPF 391

Query: 325 YESSTVLAQKTTMAALRQLRQMAQEVTQSSVN-------------------GWGRRPAAL 365
            +S   L       A R LR + ++    +V                    G GRR  ++
Sbjct: 392 LQSGQAL------GAYRWLRCLQRQCEYITVLRSSLVLPSSSSSFSAISTLGVGRR--SV 443

Query: 366 RALSQRLSRGFNEAVNG--------FTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLS- 416
             L++R++  F  AV+G          DE W V    G + V  +V     +L   N + 
Sbjct: 444 MELARRMTASFYAAVSGPVTVPATSSVDE-WRVSSGSGAERVEAVV-----RLAVWNCAD 497

Query: 417 FANGFPAVSNAVLCAKASMLLQNVPPAILLRFL--REHRSEW 456
              G PAV+  VL A  ++ L   PP  +  +L   + R EW
Sbjct: 498 IMPGEPAVT--VLSATTTVWLPGTPPMRVREYLFDLQRRGEW 537


>gi|410921498|ref|XP_003974220.1| PREDICTED: LIM/homeobox protein Lhx4-like [Takifugu rubripes]
          Length = 389

 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 27/155 (17%)

Query: 22  TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 80
           T +Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 166 TAKQLETLKSAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 221

Query: 81  R------LQAVNR--------KLTAMNKLLMEEND---RLQKQVSQLVYENGYFRQHTQS 123
           R       ++V R        K ++ +   + +++   R  + +S L + NG +      
Sbjct: 222 RHRWTQFYKSVKRSRGGTKVEKESSADDAGLSDSELSFRDDQVLSDLGHTNGLYGS-VGD 280

Query: 124 TTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGL 158
            T +T      SV  SGQ    P H  R  SP GL
Sbjct: 281 VTSSTVLNGGFSVDASGQ----PYHDIRAGSPYGL 311


>gi|242036601|ref|XP_002465695.1| hypothetical protein SORBIDRAFT_01g043910 [Sorghum bicolor]
 gi|241919549|gb|EER92693.1| hypothetical protein SORBIDRAFT_01g043910 [Sorghum bicolor]
          Length = 242

 Score = 48.9 bits (115), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 11/106 (10%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           DG  G  +  K  R + EQ   LE  + +  K  + R+ QL  E      ++ KQ+ VWF
Sbjct: 48  DGGEGGDEQAKKRRLSDEQARFLELSFRKERKLETPRKVQLAAEL----GLDAKQVAVWF 103

Query: 67  QNRRCREKQR---KEASRLQAVNRKLTAMN----KLLMEENDRLQK 105
           QNRR R K +   +E S+L+A +  +   N      L++  DRL++
Sbjct: 104 QNRRARHKSKLMEEEFSKLRAAHDAVVLQNCHLETELLKMKDRLEE 149


>gi|79540980|ref|NP_200742.2| WUSCHEL-related homeobox 2 [Arabidopsis thaliana]
 gi|61217291|sp|Q6X7K1.1|WOX2_ARATH RecName: Full=WUSCHEL-related homeobox 2
 gi|37909289|gb|AAP37132.1| WOX2 protein [Arabidopsis thaliana]
 gi|225879134|dbj|BAH30637.1| hypothetical protein [Arabidopsis thaliana]
 gi|332009790|gb|AED97173.1| WUSCHEL-related homeobox 2 [Arabidopsis thaliana]
          Length = 260

 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 22 TPEQVEALERLYHECPK-PSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEAS 80
          T +Q+  LE LY E  + PS+ + QQ+        +IE K +  WFQN + R++Q+++  
Sbjct: 18 TKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQKQKQE 77

Query: 81 RLQAVNRKLTAMNKLL 96
          R+   NR L   ++  
Sbjct: 78 RMAYFNRLLHKTSRFF 93


>gi|242036675|ref|XP_002465732.1| hypothetical protein SORBIDRAFT_01g044620 [Sorghum bicolor]
 gi|241919586|gb|EER92730.1| hypothetical protein SORBIDRAFT_01g044620 [Sorghum bicolor]
          Length = 324

 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R   EQV ALER +    K    R+ ++ R+      ++P+Q+ VWFQNRR R K +
Sbjct: 70  KKRRLLQEQVRALERCFETDNKLDPDRKARIARDL----ALQPRQVAVWFQNRRARWKTK 125

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
              ++ S L+A +  L A    L  + D L  ++ +L
Sbjct: 126 TLERDFSALRARHDALRADCDALRRDKDALAAEIREL 162


>gi|297710903|ref|XP_002832099.1| PREDICTED: rhox homeobox family member 2 [Pongo abelii]
 gi|345649178|gb|AEO14120.1| RHOXF2 protein [Pongo pygmaeus]
          Length = 287

 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 9/128 (7%)

Query: 4   SCKDGKTGSLDNGKYVR-----YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIE 58
           S   G TG L+ G   +     +TP Q++ LER++     PS   R++L R      N+ 
Sbjct: 113 SLTQGATGGLEPGNAQQPNVHAFTPLQLQELERIFQRKQFPSEFLRRRLARSL----NVT 168

Query: 59  PKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFR 118
              +++WF+NRR + ++ + A   + +   +     +++   + +   +S     +GYF 
Sbjct: 169 ELAVQIWFENRRAKWRRHQRALMARNMPPLMVVGQPVVVTTVEAIMAPLSISGMTDGYFW 228

Query: 119 QHTQSTTL 126
            H+ S++L
Sbjct: 229 GHSHSSSL 236


>gi|225469372|ref|XP_002263193.1| PREDICTED: homeobox-leucine zipper protein HAT4-like isoform 1
           [Vitis vinifera]
 gi|296085703|emb|CBI29502.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 15/143 (10%)

Query: 1   MAMSCKDGKTGSLDNG---KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNI 57
           M  +C  G +   D     K +R + +Q   LE  + E    +  ++  L ++     N+
Sbjct: 120 MERACSRGISDEEDGDTSRKKLRLSKDQSAILEENFKEHNTLNPKQKLALAKQL----NL 175

Query: 58  EPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ---LVYEN 114
            P+Q++VWFQNRR R K ++     + + R      + L EEN RLQK+V++   L    
Sbjct: 176 RPRQVEVWFQNRRARTKLKQTEVDCEFLKR----CCENLTEENRRLQKEVNELRALKLSP 231

Query: 115 GYFRQHTQSTTLATKDTSCESVV 137
            ++ Q T  TTL T   SCE V 
Sbjct: 232 QFYMQMTPPTTL-TMCPSCERVA 253


>gi|549885|gb|AAA56900.1| homeobox protein, partial [Arabidopsis thaliana]
          Length = 165

 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 13/136 (9%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           D + GS    K +R + +Q   LE  + E    S++  +Q I     L N+ P+Q++VWF
Sbjct: 11  DDENGS--TRKKLRLSKDQSAFLEDSFKE---HSTLNPKQKIALAKQL-NLRPRQVEVWF 64

Query: 67  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQST 124
           QNRR R K ++     + + R   +    L EEN RLQK+V +L  +  +  F     +T
Sbjct: 65  QNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTLKTSTPFYMQLPAT 120

Query: 125 TLATKDTSCESVVTSG 140
           TL T   SCE V TS 
Sbjct: 121 TL-TMCPSCERVATSA 135


>gi|348532229|ref|XP_003453609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
          Length = 407

 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 15/144 (10%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           D   G    G       +Q+E L+  +   PKP+   R+QL +E    + +  + I+VWF
Sbjct: 174 DQNLGGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQE----TGLNMRVIQVWF 229

Query: 67  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTL 126
           QNRR +E++ K+ S L A         + +    DRL+    +L+  NG F  +      
Sbjct: 230 QNRRSKERRMKQLSALGARRHAFFRSPRRMRALGDRLEP--GELI-PNGPFSYYG----- 281

Query: 127 ATKDTSCESVVTSGQHHLTPQHPP 150
              D   E    +G +   PQ PP
Sbjct: 282 ---DYQSEYYGPAGNYDFFPQGPP 302


>gi|449266486|gb|EMC77539.1| LIM/homeobox protein Lhx4, partial [Columba livia]
          Length = 236

 Score = 48.9 bits (115), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 5/61 (8%)

Query: 22  TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 80
           T +Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 140 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 195

Query: 81  R 81
           R
Sbjct: 196 R 196


>gi|414869823|tpg|DAA48380.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 448

 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 19/128 (14%)

Query: 17  KYVRYTPEQVEALERLYHE----CPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           K +R + EQ   LE  + E     PK  +   +QL        N+ P+Q++VWFQNRR R
Sbjct: 265 KKLRLSKEQSAFLEESFKEHSTLNPKQKAALAKQL--------NLRPRQVEVWFQNRRAR 316

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKD 130
            K ++     + + R      + L EEN RL K++++L  +     F     +TTL +  
Sbjct: 317 TKLKQTEVDCEYLKR----CCETLTEENRRLHKELAELRALKTAPPFFMRLPATTL-SMC 371

Query: 131 TSCESVVT 138
            SCE V +
Sbjct: 372 PSCERVAS 379


>gi|224133286|ref|XP_002321530.1| predicted protein [Populus trichocarpa]
 gi|222868526|gb|EEF05657.1| predicted protein [Populus trichocarpa]
          Length = 268

 Score = 48.9 bits (115), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +QV+ LE+ +    K    R+ QL ++      ++P+Q+ +WFQNRR R K +
Sbjct: 40  KKRRLTVDQVQFLEKSFELENKLEPERKIQLAKDL----GLQPRQVAIWFQNRRARWKTK 95

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
              K+   LQ+    L A    L++E ++L+ +V+ L
Sbjct: 96  QLEKDYDVLQSSYNSLKADYDNLLKEKEKLKAEVNLL 132


>gi|363807197|ref|NP_001242095.1| uncharacterized protein LOC100790840 [Glycine max]
 gi|255641463|gb|ACU21007.1| unknown [Glycine max]
          Length = 280

 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 7/109 (6%)

Query: 2   AMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQ 61
           A + +D   GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+Q
Sbjct: 60  ANAEEDSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARAF----GLQPRQ 115

Query: 62  IKVWFQNRRCREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 107
           I +WFQNRR R K ++       + R+  A+   N  L  +N +LQ ++
Sbjct: 116 IAIWFQNRRARWKTKQLEKDYDLLKRQYEAIKADNDALQFQNQKLQTEI 164


>gi|224140973|ref|XP_002323851.1| predicted protein [Populus trichocarpa]
 gi|222866853|gb|EEF03984.1| predicted protein [Populus trichocarpa]
          Length = 292

 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 8/103 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ALE+ +    K    R+ QL +       ++P+QI +WFQNRR
Sbjct: 72  GSQIGEKKKRLNLEQVKALEKSFELGNKLEPERKMQLAKAL----GLQPRQIAIWFQNRR 127

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 113
            R K ++     + + ++  A    L  +ND LQ Q  +L  E
Sbjct: 128 ARWKTKQLEKDYEVLKKQFDA----LKADNDALQAQNKKLHAE 166


>gi|6714433|gb|AAF26121.1|AC012328_24 hypothetical protein [Arabidopsis thaliana]
          Length = 695

 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 15/74 (20%)

Query: 31  RLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLT 90
           + + ECP P   +R QL RE      +EP QIK WFQN+R + K +++ S          
Sbjct: 38  KTFIECPHPDERQRNQLCREL----KLEPDQIKFWFQNKRTQSKTQEDRS---------- 83

Query: 91  AMNKLLMEENDRLQ 104
             N LL  EN+ LQ
Sbjct: 84  -TNVLLRGENETLQ 96


>gi|157830485|pdb|1BW5|A Chain A, The Nmr Solution Structure Of The Homeodomain Of The Rat
          Insulin Gene Enhancer Protein Isl-1, 50 Structures
          Length = 66

 Score = 48.9 bits (115), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 35/53 (66%), Gaps = 4/53 (7%)

Query: 24 EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
          +Q+  L   Y   P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 13 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 61


>gi|94039292|dbj|BAE93505.1| LIM homeobox protein 4 [Bos taurus]
          Length = 181

 Score = 48.9 bits (115), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 5/61 (8%)

Query: 22  TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 80
           T +Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 46  TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 101

Query: 81  R 81
           R
Sbjct: 102 R 102


>gi|356572472|ref|XP_003554392.1| PREDICTED: homeobox-leucine zipper protein HAT7-like [Glycine max]
          Length = 292

 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 17/123 (13%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + EQV+ALE+ +    K    R+ QL +       ++P+QI +WFQNRR R K +
Sbjct: 88  KKKRLSLEQVKALEKSFELGNKLEPERKMQLAKAL----GLQPRQIAIWFQNRRARWKTK 143

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
           +     + + ++  A+      +ND L+ Q  +L         HT+  TL  +D +    
Sbjct: 144 QLEKEYEVLKKQFEAVKA----DNDSLKSQNQKL---------HTELQTLKRRDCNETGT 190

Query: 137 VTS 139
           V S
Sbjct: 191 VIS 193


>gi|357148036|ref|XP_003574599.1| PREDICTED: homeobox-leucine zipper protein HOX27-like [Brachypodium
           distachyon]
          Length = 346

 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 11/122 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + +Q   LE  + E    S++  +Q +     L N+ P+Q++VWFQNRR R K +
Sbjct: 174 KKLRLSKDQSAFLEESFKEH---STLNPKQKVALAKQL-NLRPRQVEVWFQNRRARTKLK 229

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
           +     + + R      + L EEN RL K++S+L  +     F  H  +TTL+    SCE
Sbjct: 230 QTEVDCEYLKR----CCETLTEENRRLHKELSELRALKTAQPFYMHLPATTLSMC-PSCE 284

Query: 135 SV 136
            V
Sbjct: 285 RV 286


>gi|449447319|ref|XP_004141416.1| PREDICTED: homeobox-leucine zipper protein HAT22-like [Cucumis
           sativus]
          Length = 261

 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R T  Q   LE  + E    S  ++Q L R+     N+ P+Q++VWFQNRR R K +
Sbjct: 110 KKLRLTKHQSAILEDNFKEHSSLSPKQKQDLARQL----NLRPRQVEVWFQNRRARTKLK 165

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           +     +     L    + L EEN RLQK++ +L
Sbjct: 166 QTEMDCEL----LKKCCEKLKEENTRLQKELQEL 195


>gi|443701941|gb|ELU00131.1| hypothetical protein CAPTEDRAFT_168913 [Capitella teleta]
          Length = 481

 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 11/116 (9%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
           G  GS   G       +Q+E L+  +   PKP+   R+QL +E    + +  + I+VWFQ
Sbjct: 258 GGKGSKKRGPRTTIKAKQLEVLKSAFAATPKPTRHIREQLAKE----TGLPMRVIQVWFQ 313

Query: 68  NRRCREKQRKEASRLQAVNRKLTAMNKL-LMEENDRLQKQVSQLVYENGYFRQHTQ 122
           N+R +E++ K+ S L A  +      +L  ++EN  L      +   N YF +H +
Sbjct: 314 NKRSKERRMKQLSALGARRQFFRGPRRLRALDENPDL------MGPHNYYFPEHQE 363


>gi|15228625|ref|NP_191748.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|75182677|sp|Q9M276.1|ATB12_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-12; AltName:
           Full=HD-ZIP protein ATHB-12; AltName: Full=Homeodomain
           transcription factor ATHB-12
 gi|6899887|emb|CAB71896.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|16648917|gb|AAL24310.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|21592794|gb|AAM64743.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|25084309|gb|AAN72217.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
 gi|332646754|gb|AEE80275.1| homeobox-leucine zipper protein ATHB-12 [Arabidopsis thaliana]
          Length = 235

 Score = 48.5 bits (114), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 53/94 (56%), Gaps = 7/94 (7%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 76
           R++ EQ+++LE ++    +    ++ Q+ RE      ++P+Q+ +WFQN+R R K +   
Sbjct: 33  RFSEEQIKSLELIFESETRLEPRKKVQVAREL----GLQPRQVAIWFQNKRARWKTKQLE 88

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           KE + L+A    L +  +++ +E   L  ++ +L
Sbjct: 89  KEYNTLRANYNNLASQFEIMKKEKQSLVSELQRL 122


>gi|3868847|dbj|BAA34244.1| CRHB10 [Ceratopteris richardii]
          Length = 214

 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 16/98 (16%)

Query: 17  KYVRYTPEQVEALERLYHE----CPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           K +R T EQ   LE  + E     PK  S   +QL        N  P+Q++VWFQNRR R
Sbjct: 60  KKLRLTKEQSAFLEESFKEHSTFNPKQKSALAKQL--------NFRPRQVEVWFQNRRAR 111

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
            K ++     + + R   +    L EEN RLQK+V +L
Sbjct: 112 TKLKQTEVDCELLKRCCES----LTEENRRLQKEVQEL 145


>gi|187609447|sp|A2Z0Q0.1|HOX25_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX25; AltName:
           Full=HD-ZIP protein HOX25; AltName: Full=Homeodomain
           transcription factor HOX25; AltName: Full=OsHox25
 gi|125563531|gb|EAZ08911.1| hypothetical protein OsI_31176 [Oryza sativa Indica Group]
          Length = 260

 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 8/92 (8%)

Query: 20  RYTPEQVEALERLYHECPKP-SSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK- 77
           R T EQV ALER + E  +     R+ +L R       I P+Q+ VWFQNRR R K ++ 
Sbjct: 25  RLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVWFQNRRARWKTKQL 80

Query: 78  --EASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
             +  RL+A + +L A    L  +N+ L+ QV
Sbjct: 81  ELDFDRLRAAHDELLAGRAALAADNESLRSQV 112


>gi|402911275|ref|XP_003918262.1| PREDICTED: rhox homeobox family member 2B-like [Papio anubis]
          Length = 285

 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 9/161 (5%)

Query: 4   SCKDGKTGSLDNGKYVR-----YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIE 58
           S   G  G L+ G         +TP Q++ LER++     PS   R++L R      N+ 
Sbjct: 116 SPPPGAVGGLEPGNAQEPSVHAFTPLQLQELERIFQRKKYPSEFLRRRLARSM----NVT 171

Query: 59  PKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFR 118
              +++WF+NRR + ++ + A   + +   +     +++   + +   +S     +GYF 
Sbjct: 172 ELAVQIWFENRRAKWRRHQRALMARNMPPLMVVGQPVMVTAVEAIMAPLSISGMRDGYFW 231

Query: 119 QHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLL 159
            +  S+TL    +              P  PP D +  G L
Sbjct: 232 GYGHSSTLGFSMSPFPPPSLPLPTVFLPPMPPSDEAQFGPL 272


>gi|212720748|ref|NP_001132844.1| uncharacterized protein LOC100194336 [Zea mays]
 gi|194695554|gb|ACF81861.1| unknown [Zea mays]
 gi|219885465|gb|ACL53107.1| unknown [Zea mays]
 gi|408690270|gb|AFU81595.1| HB-type transcription factor, partial [Zea mays subsp. mays]
 gi|414589737|tpg|DAA40308.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 273

 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + EQV ALER +    K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 51  KKRRLSAEQVRALERSFEVENKLEPERKARLARDL----GLQPRQVAVWFQNRRARWKTK 106

Query: 77  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
           +      A+ R   A+   +  L  + D L  ++ +L
Sbjct: 107 QLERDYAALRRSYDALRLDHDALRRDKDALLAEIREL 143


>gi|356548619|ref|XP_003542698.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Glycine max]
          Length = 285

 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + EQV  LE+ + E  K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 66  KKHRLSSEQVHLLEKNFEEENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 121

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
              ++   L++    L +    +M+EN++L+ +V  L
Sbjct: 122 QLERDYDVLKSSYDTLLSSYDSIMKENEKLKSEVVSL 158


>gi|75129564|sp|Q6V9S9.1|HOX8_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX8; AltName:
           Full=HD-ZIP protein HOX8; AltName: Full=Homeodomain
           transcription factor HOX8; AltName: Full=OsHox8
 gi|33943626|gb|AAQ55492.1| homeodomain leucine-zipper protein Hox8 [Oryza sativa Indica Group]
 gi|78708411|gb|ABB47386.1| Homeobox domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|215769297|dbj|BAH01526.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 281

 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 18/106 (16%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           K  R   EQV ALER +    K    R+ ++ R+      + P+Q+ VWFQNRR R K  
Sbjct: 41  KKRRLAAEQVRALERSFEADNKLDPERKARIARDL----RLHPRQVAVWFQNRRARWKTK 96

Query: 75  ----------QRKEASRLQ--AVNRKLTAMNKLLMEENDRLQKQVS 108
                      R +A RL+  A+ R   A+   + +  DR+  Q+S
Sbjct: 97  QIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDRVDGQMS 142


>gi|558491|gb|AAB31260.1| LIM-type homeodomain [Mus sp.]
          Length = 230

 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 5/61 (8%)

Query: 22 TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 80
          T +Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 5  TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 60

Query: 81 R 81
          R
Sbjct: 61 R 61


>gi|242040187|ref|XP_002467488.1| hypothetical protein SORBIDRAFT_01g029000 [Sorghum bicolor]
 gi|241921342|gb|EER94486.1| hypothetical protein SORBIDRAFT_01g029000 [Sorghum bicolor]
          Length = 346

 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 16/98 (16%)

Query: 17  KYVRYTPEQVEALERLYHE----CPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           K +R + +Q   LE  + E     PK  +   +QL        N++P+Q++VWFQNRR R
Sbjct: 195 KKLRLSKDQAAVLEDSFKEHNTLNPKQKAALAKQL--------NLKPRQVEVWFQNRRAR 246

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
            K ++     + + R      + L EEN RLQ++V++L
Sbjct: 247 TKLKQTEVDCEFLKR----CCETLTEENRRLQREVAEL 280


>gi|356528152|ref|XP_003532669.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine
          max]
          Length = 784

 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 7/86 (8%)

Query: 16 GKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK- 74
          G+  R     V  LE ++ ECP P+  RR+Q+  E  +  N    Q+K WFQNR+ + K 
Sbjct: 10 GRGNRLNHATVSKLEAIFRECPYPNENRRRQISEELELSLN----QVKFWFQNRKTKLKA 65

Query: 75 --QRKEASRLQAVNRKLTAMNKLLME 98
            +R + + L+  N  + + N L+ E
Sbjct: 66 ISERIDNNALRRENENIQSENLLMRE 91


>gi|414881233|tpg|DAA58364.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 259

 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 21/157 (13%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALE---RLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 64
           G  G     K +R + EQ   LE   RL H     +  +++ L     +   + P+Q++V
Sbjct: 105 GGAGGPHRAKKLRLSKEQSRLLEESFRLNHTL---TPKQKEALA----VKLKLRPRQVEV 157

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL----VYENGYFRQH 120
           WFQNRR R K ++     + + R   +    L EEN RLQ++V +L    V        H
Sbjct: 158 WFQNRRARTKLKQTELECEYLKRCFGS----LTEENRRLQREVEELRAMRVAPPTVLSPH 213

Query: 121 TQSTTLATKDTSCESV--VTSGQHHLTPQHPPRDASP 155
           T+    A+  T C     +T+     TP+ PP  ASP
Sbjct: 214 TRQPLPASALTMCPRCERITAATAARTPRPPP-AASP 249


>gi|402467857|gb|EJW03091.1| hypothetical protein EDEG_02526 [Edhazardia aedis USNM 41457]
          Length = 517

 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 4/60 (6%)

Query: 19  VRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 78
           ++ + EQ+E LE  + E PKP+S  +++L +    L NI  K I++WFQNRR +++  KE
Sbjct: 153 IKISAEQLEILEEKFKENPKPTSSVKKELGK----LLNIPAKNIQIWFQNRRAKQRTEKE 208


>gi|356550712|ref|XP_003543728.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max]
          Length = 213

 Score = 48.5 bits (114), Expect = 0.014,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 12/122 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + +    + +++Q L  +     N++ +Q++VWFQNRR R K +
Sbjct: 93  KKLRLSKEQSSMLENSFKQHSTLNPVQKQALADQL----NLKTRQVEVWFQNRRARTKLK 148

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL----VYENGYFRQHTQSTTLATKDTS 132
           +     +  +  L    + L +EN RL+K++ +L    V  +    Q +++ TL T  +S
Sbjct: 149 QT----EVDHELLKKHCQNLSDENKRLKKELQELRALKVGPSPLCIQLSKTATLTTMCSS 204

Query: 133 CE 134
           C+
Sbjct: 205 CD 206


>gi|296087684|emb|CBI34940.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 49  KKRRLTPEQVHLLEKSFEAENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 104

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++   L++    L +    +++E ++L+ +V  L 
Sbjct: 105 QLERDYDLLKSSYDSLVSEYDSILKEKEKLKSEVVSLT 142


>gi|134035510|gb|ABO47743.1| homeobox protein [Gossypium hirsutum]
          Length = 275

 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 8/103 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ALE+ +    K    R+ QL +       ++P+QI +WFQNRR
Sbjct: 72  GSHLGEKKKRLNLEQVKALEKSFELGNKLEPERKVQLAKAL----GLQPRQIAIWFQNRR 127

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 113
            R K ++      A+ ++  A    L  +ND LQ Q  +L  E
Sbjct: 128 ARWKTKQLEKDYDALKKQFEA----LKADNDALQAQNKKLNAE 166


>gi|187471150|sp|A2Z1U1.1|HOX11_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX11; AltName:
           Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain
           transcription factor HOX11; AltName: Full=OsHox11
 gi|125563922|gb|EAZ09302.1| hypothetical protein OsI_31575 [Oryza sativa Indica Group]
          Length = 276

 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 11/122 (9%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 90  KKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQL----NLRPRQVEVWFQNRRARTKLK 145

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQSTTLATKDTSCE 134
           +     + + R      + L EEN RLQK++++L  +     F  H  +TTL+    SCE
Sbjct: 146 QTEVDCEYLKR----CCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMC-PSCE 200

Query: 135 SV 136
            V
Sbjct: 201 RV 202


>gi|357483327|ref|XP_003611950.1| Homeodomain-leucine zipper protein [Medicago truncatula]
 gi|355513285|gb|AES94908.1| Homeodomain-leucine zipper protein [Medicago truncatula]
          Length = 207

 Score = 48.5 bits (114), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 7/117 (5%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           K G+  + D  K  + + EQV  LE  +    K  S ++ +L  E      ++P+Q+ VW
Sbjct: 42  KGGENSANDMNKKRKLSDEQVNILEENFGNEHKLESEKKDRLAMEL----GLDPRQVAVW 97

Query: 66  FQNRRCREKQRKEASRLQAV--NRKLTAMNKLLMEEND-RLQKQVSQLVYENGYFRQ 119
           FQNRR R K +K      ++  N + T + K L+E    +L++Q+S+   E    R+
Sbjct: 98  FQNRRARWKNKKLEEEYFSLKKNHESTILEKCLLETKMLKLREQLSEAEKEIQRLRE 154


>gi|298709188|emb|CBJ31131.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1128

 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 22/103 (21%)

Query: 244  RDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC---EGG 300
            RDF LL     LEDG+  +  RS+ +    P  PPV+  VR  ++  G+L+ P     GG
Sbjct: 999  RDFSLLSSWGTLEDGTTYLLNRSVDH----PMNPPVKGHVRGIVMLCGFLMVPRARESGG 1054

Query: 301  GSIIHIVDHMDL---------------EPWSVPEVLRPLYESS 328
            G +I ++ H DL                PW + + LR  +ESS
Sbjct: 1055 GCVITMIVHTDLGGNLPATILNRLSTSSPWRLVQRLRSAFESS 1097


>gi|18858909|ref|NP_571039.1| insulin gene enhancer protein isl-2b [Danio rerio]
 gi|1708564|sp|P53407.1|ISL2B_DANRE RecName: Full=Insulin gene enhancer protein isl-2b; Short=Islet-2B;
           AltName: Full=Insulin gene enhancer protein isl-3;
           Short=Islet-3
 gi|1037168|dbj|BAA07485.1| zfIsl-3 [Danio rerio]
 gi|55962547|emb|CAI11499.1| islet 3 [Danio rerio]
 gi|63100507|gb|AAH95011.1| Islet2b [Danio rerio]
          Length = 358

 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 36/53 (67%), Gaps = 4/53 (7%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 201 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 249


>gi|339252354|ref|XP_003371400.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
 gi|316968379|gb|EFV52660.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
          Length = 1751

 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 46/76 (60%), Gaps = 5/76 (6%)

Query: 24   EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE-ASRL 82
            +Q+  L   Y   P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K+++    ++
Sbjct: 1564 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKQLIMKQI 1619

Query: 83   QAVNRKLTAMNKLLME 98
            Q  + K   +N + M+
Sbjct: 1620 QQQHVKNQTLNGIRMQ 1635


>gi|357477401|ref|XP_003608986.1| Homeobox-leucine zipper protein ATHB-6 [Medicago truncatula]
 gi|217073494|gb|ACJ85107.1| unknown [Medicago truncatula]
 gi|355510041|gb|AES91183.1| Homeobox-leucine zipper protein ATHB-6 [Medicago truncatula]
 gi|388499834|gb|AFK37983.1| unknown [Medicago truncatula]
          Length = 337

 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + +QV+ LE+ + E  K    R+ +L ++      ++P+Q+ +WFQNRR R K +
Sbjct: 95  KKRRLSVDQVQFLEKSFEEDNKLEPERKTKLAKDL----GLQPRQVAIWFQNRRARWKTK 150

Query: 77  KEASRLQAVN---RKLTAMNKLLMEENDRLQKQVSQLV 111
           +      ++N     L      L++E DRLQ +V+ L 
Sbjct: 151 QLEKDYDSLNDGYESLKTEYDNLLKEKDRLQSEVASLT 188


>gi|414589432|tpg|DAA40003.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein, partial [Zea mays]
          Length = 282

 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQ---QLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           R T EQV  LE  + E  +    +R+   +   E      I P+Q+ VWFQNRR R + +
Sbjct: 92  RLTAEQVRELELSFEEEKRKLEPKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWRSK 151

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++  RL+A +  L A    L+ +NDRL+ QV  L 
Sbjct: 152 QLEQDFDRLRAAHDDLIAGRDALLADNDRLRSQVITLT 189


>gi|357113844|ref|XP_003558711.1| PREDICTED: homeobox-leucine zipper protein HOX21-like [Brachypodium
           distachyon]
          Length = 335

 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 116 KKRRLNVEQVRTLEKNFELANKLEPERKIQLARAL----GLQPRQVAIWFQNRRARWKTK 171

Query: 77  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 107
           +       + R+  A+   N  L+  N +LQ ++
Sbjct: 172 QLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEI 205


>gi|390339027|ref|XP_781774.3| PREDICTED: insulin gene enhancer protein ISL-1-like
           [Strongylocentrotus purpuratus]
          Length = 402

 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 48/81 (59%), Gaps = 11/81 (13%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR----KEA 79
           +Q+  L   Y   P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K+R    K+ 
Sbjct: 223 KQLHTLRTCYAANPRPDALMKEQLVE----MTQLSPRVIRVWFQNKRCKDKKRTVLMKQI 278

Query: 80  SRLQAV---NRKLTAMNKLLM 97
           +  QA    NR++ + N + M
Sbjct: 279 ADQQASKDPNRRVQSFNGVPM 299


>gi|324120795|dbj|BAJ78787.1| Islet homologue protein [Lethenteron camtschaticum]
          Length = 284

 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 36/53 (67%), Gaps = 4/53 (7%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Q++ L   Y   P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 124 KQLQTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 172


>gi|19920110|gb|AAM08542.1|AC079935_14 Putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
          Length = 295

 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 18/106 (16%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           K  R   EQV ALER +    K    R+ ++ R+      + P+Q+ VWFQNRR R K  
Sbjct: 55  KKRRLAAEQVRALERSFEADNKLDPERKARIARDL----RLHPRQVAVWFQNRRARWKTK 110

Query: 75  ----------QRKEASRLQ--AVNRKLTAMNKLLMEENDRLQKQVS 108
                      R +A RL+  A+ R   A+   + +  DR+  Q+S
Sbjct: 111 QIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDRVDGQMS 156


>gi|224144245|ref|XP_002325233.1| predicted protein [Populus trichocarpa]
 gi|222866667|gb|EEF03798.1| predicted protein [Populus trichocarpa]
          Length = 207

 Score = 48.5 bits (114), Expect = 0.015,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 14/130 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R T EQ   LE  +      +  ++  L  +     N++P+Q++VWFQNRR R K +
Sbjct: 88  KKLRLTKEQSSLLEESFRRHTTLNPAQKHSLAEQL----NLKPRQVEVWFQNRRARTKLK 143

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS---C 133
           +     + + +   +++     EN RL+K++ QL  +    R     T LA + TS   C
Sbjct: 144 QTEVDCEFLKKCCESLSN----ENRRLKKELQQLRSQK-MGRSSPLYTQLAKEGTSTMCC 198

Query: 134 ESVVTSGQHH 143
            S    G++H
Sbjct: 199 SSC--KGKYH 206


>gi|21668482|dbj|BAC01272.1| LIM homeobox protein 4 [Homo sapiens]
          Length = 240

 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 5/61 (8%)

Query: 22 TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 80
          T +Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 15 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 70

Query: 81 R 81
          R
Sbjct: 71 R 71


>gi|195624636|gb|ACG34148.1| homeobox-leucine zipper protein HAT22 [Zea mays]
 gi|219885625|gb|ACL53187.1| unknown [Zea mays]
 gi|414868042|tpg|DAA46599.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 262

 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 8/104 (7%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           D   G   + K +R + EQ   LE  + E    +  ++  L R+     N+ P+Q++VWF
Sbjct: 94  DDDEGCNSSRKKLRLSKEQSALLEDHFKEHSTLNPKQKAALARQL----NLSPRQVEVWF 149

Query: 67  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           QNRR R K ++     + + R      + L EEN RL +++ QL
Sbjct: 150 QNRRARTKLKQTEVDCEILKR----CCETLTEENRRLHRELQQL 189


>gi|3868833|dbj|BAA34237.1| CRHB3 [Ceratopteris richardii]
          Length = 212

 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 13/111 (11%)

Query: 5   CKDGKTGSLDNG-----KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEP 59
           C+ G  GS +       K +R + EQ   LE  + E    +S ++  L ++     N+ P
Sbjct: 41  CEVGSRGSDEEEGNSTRKKLRLSKEQSALLEESFKEYNTLNSKQKSALAKQL----NLRP 96

Query: 60  KQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           +Q++VWFQNRR R K ++     + + R   +    L EEN RLQK+V +L
Sbjct: 97  RQVEVWFQNRRARTKLKQTEVDCELLKRCCES----LTEENRRLQKEVQEL 143


>gi|395530909|ref|XP_003767529.1| PREDICTED: uncharacterized protein LOC100914829 [Sarcophilus
           harrisii]
          Length = 659

 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 5/61 (8%)

Query: 22  TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 80
           T +Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 434 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 489

Query: 81  R 81
           R
Sbjct: 490 R 490


>gi|293339636|gb|ADE44110.1| tailup [Megaselia abdita]
          Length = 348

 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
           +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K++    +LQ
Sbjct: 177 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKKTIQMKLQ 232

Query: 84  AVNRK 88
               K
Sbjct: 233 MQQEK 237


>gi|147809664|emb|CAN62385.1| hypothetical protein VITISV_011126 [Vitis vinifera]
          Length = 285

 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 10/123 (8%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+  L R       ++P+QI +WFQNRR
Sbjct: 74  GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMXLARAL----GLQPRQIAIWFQNRR 129

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYF--RQHTQSTTLAT 128
            R K ++       + R+  A+      END LQ Q  +L  E      R+ T+S  L  
Sbjct: 130 ARWKTKQLEKDYDLLKRQFEAVKA----ENDALQAQNQKLHAEMLALKSREPTESINLNI 185

Query: 129 KDT 131
           K+T
Sbjct: 186 KET 188


>gi|302398841|gb|ADL36715.1| HD domain class transcription factor [Malus x domestica]
          Length = 289

 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 7/100 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 75  GSQVGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 130

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 107
            R K ++       + R+  A+   N  L  +N +LQ ++
Sbjct: 131 ARWKTKQLEKDYDLLKRQFDAIKADNDALQSQNQKLQAEI 170


>gi|341925954|dbj|BAK53866.1| insulin gene enhancer protein isl-1 [Dugesia japonica]
          Length = 517

 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 36/54 (66%), Gaps = 4/54 (7%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
           +Q+  L   Y   P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K+R+
Sbjct: 316 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKRQ 365


>gi|449519336|ref|XP_004166691.1| PREDICTED: homeobox-leucine zipper protein HAT14-like, partial
           [Cucumis sativus]
          Length = 372

 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 8/94 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + E    +  ++Q L ++     N+ P+Q++VWFQNRR R K +
Sbjct: 213 KKLRLSKEQSAFLEESFKEHNTLNPKQKQALAKQL----NLRPRQVEVWFQNRRARTKLK 268

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           +     + + R      + L EEN RLQK++ +L
Sbjct: 269 QTEVDCEYLKR----CCETLTEENRRLQKELQEL 298


>gi|20339337|gb|AAM19349.1| LIM homeobox protein [Homo sapiens]
          Length = 239

 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 5/61 (8%)

Query: 22 TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 80
          T +Q+E L+  Y   PKP+   R+QL  E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 14 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 69

Query: 81 R 81
          R
Sbjct: 70 R 70


>gi|356530687|ref|XP_003533912.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max]
          Length = 327

 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 13/133 (9%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           D + GS    K +R + EQ   LE  + E    +  ++  L ++     N+ P+Q++VWF
Sbjct: 157 DDENGS--TRKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQL----NLRPRQVEVWF 210

Query: 67  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQST 124
           QNRR R K ++     + + R      + L EEN RLQK++ +L  +  +  F     +T
Sbjct: 211 QNRRARTKLKQTEVDCEYLKR----CCETLTEENRRLQKELQELRALKSSQPFYMQLPAT 266

Query: 125 TLATKDTSCESVV 137
           TL T   SCE V 
Sbjct: 267 TL-TMCPSCERVA 278


>gi|328705917|ref|XP_001945631.2| PREDICTED: LIM/homeobox protein Lhx5-like [Acyrthosiphon pisum]
          Length = 555

 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 4/79 (5%)

Query: 4   SCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           S  DG +GS   G       +Q+E L+  + + PKP+   R+QL +E    +++  + I+
Sbjct: 333 SPDDGNSGSKRRGPRTTIKAKQLEILKTAFSQTPKPTRHIREQLAKE----TSLPMRVIQ 388

Query: 64  VWFQNRRCREKQRKEASRL 82
           VWFQN+R +E++ K+ + +
Sbjct: 389 VWFQNKRSKERRLKQLTSM 407


>gi|296090659|emb|CBI41059.3| unnamed protein product [Vitis vinifera]
          Length = 266

 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 12/105 (11%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           +DG  G     K +R T EQ   LE  + +    +  ++Q L ++     N+ P+Q++VW
Sbjct: 116 EDGSNGR----KKLRLTKEQSALLEESFKQHSTLNPKQKQALAKQL----NLRPRQVEVW 167

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           FQNRR R K ++     + + +   +    L +EN RLQK++ +L
Sbjct: 168 FQNRRARTKLKQTEVDCEFLKKCCES----LTDENRRLQKELQEL 208


>gi|197282004|gb|ACH57181.1| Lim/Isl [Trichoplax adhaerens]
          Length = 60

 Score = 48.5 bits (114), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 4/54 (7%)

Query: 24 EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
          +Q++ L   Y   P+P S  +++L+     L+ + P+ I+VWFQN+RC++K+ K
Sbjct: 11 KQLQTLRSYYASNPRPDSTVKEKLVE----LTGLNPRVIRVWFQNKRCKDKKIK 60


>gi|1708557|sp|P53408.1|ISL2A_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2A; Short=Islet-2A
          Length = 358

 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 36/53 (67%), Gaps = 4/53 (7%)

Query: 24  EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Q+  L   Y+  P+P ++ ++QL+     ++ + P+ I+VWFQN+RC++K+R
Sbjct: 200 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 248


>gi|327273702|ref|XP_003221619.1| PREDICTED: GS homeobox 2-like [Anolis carolinensis]
          Length = 296

 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 7/83 (8%)

Query: 1   MAMSCKDGKTGSLDNGKYVR--YTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIE 58
           + M   DG TG L NGK +R  +T  Q+  LER +      S +RR ++        N+ 
Sbjct: 180 LGMGASDG-TGPLQNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIA----TYLNLS 234

Query: 59  PKQIKVWFQNRRCREKQRKEASR 81
            KQ+K+WFQNRR + K+  + ++
Sbjct: 235 EKQVKIWFQNRRVKHKKEGKGAQ 257


>gi|297820900|ref|XP_002878333.1| hypothetical protein ARALYDRAFT_486512 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297324171|gb|EFH54592.1| hypothetical protein ARALYDRAFT_486512 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 315

 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 13/133 (9%)

Query: 6   KDGKTGSLDNG--KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIK 63
           +DG +G+ D+G  K +R + EQ   LE  + E    +  ++  L ++     N+  +Q++
Sbjct: 150 EDG-SGNGDDGSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQL----NLRTRQVE 204

Query: 64  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHT 121
           VWFQNRR R K ++     + + R        L +EN RLQK+VS+L  +  + +   H 
Sbjct: 205 VWFQNRRARTKLKQTEVDCEYLKRCCEN----LTDENRRLQKEVSELRALKLSPHLYMHM 260

Query: 122 QSTTLATKDTSCE 134
           +  T  T   SCE
Sbjct: 261 KPPTTLTMCPSCE 273


>gi|359497258|ref|XP_002271511.2| PREDICTED: homeobox-leucine zipper protein HAT22 [Vitis vinifera]
 gi|147778182|emb|CAN60988.1| hypothetical protein VITISV_022980 [Vitis vinifera]
          Length = 283

 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 12/105 (11%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           +DG  G     K +R T EQ   LE  + +    +  ++Q L ++     N+ P+Q++VW
Sbjct: 133 EDGSNGR----KKLRLTKEQSALLEESFKQHSTLNPKQKQALAKQL----NLRPRQVEVW 184

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           FQNRR R K ++     + + +   +    L +EN RLQK++ +L
Sbjct: 185 FQNRRARTKLKQTEVDCEFLKKCCES----LTDENRRLQKELQEL 225


>gi|145239455|ref|XP_001392374.1| hypothetical protein ANI_1_382074 [Aspergillus niger CBS 513.88]
 gi|134076885|emb|CAK45294.1| unnamed protein product [Aspergillus niger]
 gi|350629537|gb|EHA17910.1| hypothetical protein ASPNIDRAFT_38485 [Aspergillus niger ATCC 1015]
          Length = 705

 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  WFQNRR + KQ+K  
Sbjct: 71  RLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANWFQNRRAKAKQQKRQ 126

Query: 80  SRLQAV 85
              + +
Sbjct: 127 EEFEKM 132


>gi|407280647|gb|AFT92045.1| homeodomain leucine zipper protein 10 [Zea mays]
 gi|414589739|tpg|DAA40310.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein isoform 1 [Zea mays]
 gi|414589740|tpg|DAA40311.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein isoform 2 [Zea mays]
          Length = 274

 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + EQV ALER +    K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 52  KKRRLSAEQVRALERSFEVENKLEPERKARLARDL----GLQPRQVAVWFQNRRARWKTK 107

Query: 77  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
           +      A+ R   A+   +  L  + D L  ++ +L
Sbjct: 108 QLERDYAALRRSYDALRLDHDALRRDKDALLAEIREL 144


>gi|358372906|dbj|GAA89507.1| homeobox transcription factor [Aspergillus kawachii IFO 4308]
          Length = 705

 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R T EQVE LE  +   PKPSS  ++QL  +    +N+   ++  WFQNRR + KQ+K  
Sbjct: 71  RLTKEQVETLEAQFQAHPKPSSNVKRQLAAQ----TNLSLPRVANWFQNRRAKAKQQKRQ 126

Query: 80  SRLQAV 85
              + +
Sbjct: 127 EEFEKM 132


>gi|115451237|ref|NP_001049219.1| Os03g0188900 [Oryza sativa Japonica Group]
 gi|122247443|sp|Q10QP3.1|HOX13_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX13; AltName:
           Full=HD-ZIP protein HOX13; AltName: Full=Homeodomain
           transcription factor HOX13; AltName: Full=OsHox13
 gi|108706589|gb|ABF94384.1| Homeobox domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|113547690|dbj|BAF11133.1| Os03g0188900 [Oryza sativa Japonica Group]
 gi|215715349|dbj|BAG95100.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215740668|dbj|BAG97324.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 311

 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R   EQV ALER +    K    R+ ++ R+      ++P+Q+ VWFQNRR R K +
Sbjct: 72  KKRRLALEQVRALERSFDTDNKLDPDRKARIARDL----GLQPRQVAVWFQNRRARWKTK 127

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
              ++ + L+A +  L A    L  + D L  ++ +L
Sbjct: 128 QLERDFAALRARHDALRADCDALRRDKDALAAEIREL 164


>gi|363807768|ref|NP_001242687.1| uncharacterized protein LOC100801479 [Glycine max]
 gi|255636723|gb|ACU18697.1| unknown [Glycine max]
          Length = 279

 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 12/119 (10%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 69  GSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 124

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTL 126
            R K ++       + R+  A+   N  L  +N +LQ ++  L  +N   R+ T+S  L
Sbjct: 125 ARWKTKQLEKDYDLLKRQYDAIKADNDALQAQNQKLQTEI--LALKN---REPTESINL 178


>gi|121701879|ref|XP_001269204.1| homeobox  transcription factor, putative [Aspergillus clavatus NRRL
           1]
 gi|119397347|gb|EAW07778.1| homeobox transcription factor, putative [Aspergillus clavatus NRRL
           1]
          Length = 691

 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 7/67 (10%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK-- 77
           R T EQVE LE  +   PKPSS  ++QL  +     N+   ++  WFQNRR + KQ+K  
Sbjct: 71  RLTKEQVETLEAQFQAHPKPSSNVKRQLAAQT----NLSLPRVANWFQNRRAKAKQQKRQ 126

Query: 78  -EASRLQ 83
            E  R+Q
Sbjct: 127 EEFERMQ 133


>gi|116180364|ref|XP_001220031.1| hypothetical protein CHGG_00810 [Chaetomium globosum CBS 148.51]
 gi|88185107|gb|EAQ92575.1| hypothetical protein CHGG_00810 [Chaetomium globosum CBS 148.51]
          Length = 641

 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 28/151 (18%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R   ++VE LER + +  KPSS  +++L  +      +E  +I  WFQNRR +EKQ K+ 
Sbjct: 70  RLAKDEVELLEREFSKNQKPSSSTKRELAEQM----GVEVPRINNWFQNRRAKEKQIKKT 125

Query: 80  SRLQAVNRKLTAMN--------------KLLMEENDRLQKQVSQLVY-------ENGYFR 118
           +  +A   +  A +              K   + N    + +S   +        N Y +
Sbjct: 126 AEFEAQQARERAASDAESTGDQDQESTGKFYPDSNQDQSETLSTATFGQDDDTVHNDYAQ 185

Query: 119 QHTQ---STTLATKDTSCESVVTSGQHHLTP 146
             T+   + TLA+  T+      SGQH   P
Sbjct: 186 LKTEPIDAITLASVPTASACESPSGQHEFQP 216


>gi|357501763|ref|XP_003621170.1| Homeobox-leucine zipper-like protein [Medicago truncatula]
 gi|355496185|gb|AES77388.1| Homeobox-leucine zipper-like protein [Medicago truncatula]
          Length = 272

 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R   +QV+ALE+ +    K    R+ QL +       ++P+QI +WFQNRR R K +
Sbjct: 80  KKIRLNLDQVQALEKSFEFGNKLDPERKVQLAKAL----GLQPRQIAIWFQNRRARCKTK 135

Query: 77  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
           +  +  + + +K  A+   N  L   N +LQ ++  L
Sbjct: 136 QLENEYEVLKKKFEAVKDENDALKVHNQKLQGELEAL 172


>gi|449529531|ref|XP_004171753.1| PREDICTED: homeobox-leucine zipper protein HDG2-like, partial
           [Cucumis sativus]
          Length = 296

 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 103/281 (36%), Gaps = 66/281 (23%)

Query: 307 VDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEVTQSSV----NG 357
           V+H++++   V  + + L  S      K  +  L     R    MA  +    V    N 
Sbjct: 4   VEHVEVDDRGVHNLYKQLVSSGQAFGAKRWVTTLDRQCERLASAMATNIPTGDVGVITNQ 63

Query: 358 WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSF 417
            GR+  ++  L++R+   F   V+  T   WT +   G DDV V+   S D         
Sbjct: 64  EGRK--SMLKLAERMVISFCAGVSASTTHTWTTLSGTGADDVRVMTRKSIDD-------- 113

Query: 418 ANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAAIKVGPCS 475
               P   + ++ + A+     VPP  +  FLR+   RSEW     D+ S          
Sbjct: 114 ----PGRPHGIVLSAATSFWLPVPPKRIFDFLRDENSRSEW-----DILSNGG------- 157

Query: 476 LPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDEN 535
                       V+  +AH     +    + L  V  +        +M +LQ     +  
Sbjct: 158 ------------VVQEMAHIANGRDTGNCVSLLRVNSANSSQ---SNMLILQ-----ESC 197

Query: 536 AVGTCAELIFAPID---------ASFADDAPLLPSGFRIIP 567
              T + +I+AP+D             D   LLPSGF I+P
Sbjct: 198 TDPTASFVIYAPVDVVAMNLVLNGGDPDYVALLPSGFAILP 238


>gi|20502369|dbj|BAB91364.1| LIM homeodomain protein [Branchiostoma belcheri]
          Length = 402

 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 5/61 (8%)

Query: 22  TPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 80
           T +Q+E L++ Y   PKP+   R+QL +E    + ++ + ++VWFQNRR +EK+ +K+A 
Sbjct: 177 TAKQLETLKQAYQNSPKPARHVREQLSQE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 232

Query: 81  R 81
           R
Sbjct: 233 R 233


>gi|414589738|tpg|DAA40309.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 154

 Score = 48.1 bits (113), Expect = 0.018,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 8/97 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + EQV ALER +    K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 51  KKRRLSAEQVRALERSFEVENKLEPERKARLARDL----GLQPRQVAVWFQNRRARWKTK 106

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 113
           +      A+ R   A    L  ++D L++    L+ E
Sbjct: 107 QLERDYAALRRSYDA----LRLDHDALRRDKDALLAE 139


>gi|356564806|ref|XP_003550639.1| PREDICTED: homeobox-leucine zipper protein HAT14-like [Glycine max]
          Length = 209

 Score = 48.1 bits (113), Expect = 0.018,   Method: Composition-based stats.
 Identities = 32/102 (31%), Positives = 58/102 (56%), Gaps = 12/102 (11%)

Query: 12  SLDNG--KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 69
           S +NG  K +R + +Q   LE  + +    + +++Q L  +     N++ +Q++VWFQNR
Sbjct: 86  SNNNGCRKKLRLSKDQSSMLENSFKQHSTLNPVQKQALADQL----NLKTRQVEVWFQNR 141

Query: 70  RCREKQRKEASRLQAVNRKLTAMN-KLLMEENDRLQKQVSQL 110
           R R K ++       VNR+L   + + L +EN RL+K++ +L
Sbjct: 142 RARTKLKQ-----TEVNRELLKKHCQNLSDENKRLKKELQEL 178


>gi|255579497|ref|XP_002530591.1| homeobox protein, putative [Ricinus communis]
 gi|223529839|gb|EEF31771.1| homeobox protein, putative [Ricinus communis]
          Length = 289

 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 8/94 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R T EQ   LE  + +    +  ++Q L R+     N+ P+Q++VWFQNRR R K +
Sbjct: 144 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQL----NLRPRQVEVWFQNRRARTKLK 199

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           +     +     L    + L +EN RLQK++ +L
Sbjct: 200 QTEVDCEF----LKKCCETLTDENRRLQKELQEL 229


>gi|357113670|ref|XP_003558624.1| PREDICTED: homeobox-leucine zipper protein HOX13-like [Brachypodium
           distachyon]
          Length = 315

 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 7/99 (7%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
            GK  R   EQV ALER +    K    R+ ++ R+  +    +P+Q+ VWFQNRR R K
Sbjct: 52  GGKKRRLALEQVRALERSFEVDNKLDPERKARIARDLAL----QPRQVAVWFQNRRARWK 107

Query: 75  QR---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
            +   ++ + L+A +  L +    L  + D L  ++ +L
Sbjct: 108 TKQLERDFNALRARHDALRSDCDALRRDKDALAAEIREL 146


>gi|386778765|gb|AFJ23867.1| HB-1 [Malus x domestica]
          Length = 336

 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 9/123 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T +QV  LE+ +    K    R+ QL ++      ++P+Q+ VWFQNRR R K +
Sbjct: 79  KKRRLTSDQVHMLEKSFETENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTK 134

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQ--HTQSTTLATKDT 131
              ++   L++    L +    +++EN +L+ QV  +  + G   Q   T++T  A  D 
Sbjct: 135 QLERDYDLLKSSYDTLLSDYDSILKENQKLKSQVVSINEKLGGKEQASSTKATAFAADDH 194

Query: 132 SCE 134
             E
Sbjct: 195 DDE 197


>gi|147801558|emb|CAN77014.1| hypothetical protein VITISV_036884 [Vitis vinifera]
          Length = 411

 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 9/90 (10%)

Query: 22  TPEQVEALERLYHECPK-PSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEAS 80
           TPEQ++ALE LY    + P++ + QQ+  +  +   IE K +  WFQN + RE+Q++   
Sbjct: 164 TPEQLQALEELYRRGTRTPTAEQIQQIAAQLRLFGKIEGKNVFYWFQNHKARERQKRR-- 221

Query: 81  RLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
                 R+L + ++    +N  L+++ S L
Sbjct: 222 ------RELESDSEEQQRDNGSLERKESVL 245


>gi|225443586|ref|XP_002273463.1| PREDICTED: homeobox-leucine zipper protein ATHB-52 [Vitis vinifera]
 gi|147785778|emb|CAN64250.1| hypothetical protein VITISV_002432 [Vitis vinifera]
          Length = 171

 Score = 48.1 bits (113), Expect = 0.018,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 9/118 (7%)

Query: 20  RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 79
           R T +QV  LE  +    K  S R+ QL +E      I P+Q+ +W+QN+R R K +   
Sbjct: 19  RLTKDQVRLLETSFDLNNKLDSDRKLQLAQEL----GIPPRQVAIWYQNKRARWKNQSLE 74

Query: 80  SRLQAVNRKLTAM---NKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCE 134
               A+  +L A     + L +E DRL++++ +   +      +   +TL +  TSC+
Sbjct: 75  LEYNALQLRLDAALGDKRKLEKEVDRLKQELQKA--QEVLLSCNVTYSTLTSLSTSCD 130


>gi|38016601|gb|AAR07634.1| transcription factor Hox1 [Ptychodera flava]
          Length = 334

 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 6/87 (6%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
           G TGS +NG+   +T +Q+  LE+ +H     +  RR ++      +  +   Q+K+WFQ
Sbjct: 242 GFTGSPNNGR-TNFTNKQLTELEKEFHFNKYLTRARRVEIA----AMLGLNETQVKIWFQ 296

Query: 68  NRRCREKQR-KEASRLQAVNRKLTAMN 93
           NRR ++K+R KE +  Q +N  +   N
Sbjct: 297 NRRMKQKKRYKEPAFGQGINSMIGGKN 323


>gi|26327877|dbj|BAC27679.1| unnamed protein product [Mus musculus]
          Length = 256

 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 15/144 (10%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           D   G+   G       +Q+E L+  +   PKP+   R+QL +E  +   +    I+VWF
Sbjct: 23  DQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRV----IQVWF 78

Query: 67  QNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTL 126
           QNRR +E++ K+ S L A         + +    DRL+    +L+  NG F  +      
Sbjct: 79  QNRRSKERRMKQLSALGARRHAFFRSPRRMRPLVDRLEP--GELI-PNGPFSFYG----- 130

Query: 127 ATKDTSCESVVTSGQHHLTPQHPP 150
              D   E     G +   PQ PP
Sbjct: 131 ---DYQSEYYGPGGNYDFFPQGPP 151


>gi|357153991|ref|XP_003576633.1| PREDICTED: homeobox-leucine zipper protein HOX4-like [Brachypodium
           distachyon]
          Length = 277

 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + EQV ALER +    K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 63  KKRRLSAEQVRALERSFEVENKLEPERKARLARDL----GLQPRQVAVWFQNRRARWKTK 118

Query: 77  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
           +      A+     A+   +  L  + D L  ++ +L
Sbjct: 119 QLERDYNALRHSYDALRLDHDALRRDKDALLAEIKEL 155


>gi|122239223|sp|Q338Z7.1|HOX8_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX8; AltName:
           Full=HD-ZIP protein HOX8; AltName: Full=Homeodomain
           transcription factor HOX8; AltName: Full=OsHox8
 gi|78708410|gb|ABB47385.1| Homeobox domain containing protein, expressed [Oryza sativa
           Japonica Group]
          Length = 305

 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 18/106 (16%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           K  R   EQV ALER +    K    R+ ++ R+      + P+Q+ VWFQNRR R K  
Sbjct: 65  KKRRLAAEQVRALERSFEADNKLDPERKARIARDL----RLHPRQVAVWFQNRRARWKTK 120

Query: 75  ----------QRKEASRLQ--AVNRKLTAMNKLLMEENDRLQKQVS 108
                      R +A RL+  A+ R   A+   + +  DR+  Q+S
Sbjct: 121 QIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDRVDGQMS 166


>gi|413952729|gb|AFW85378.1| hypothetical protein ZEAMMB73_822854 [Zea mays]
          Length = 548

 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 147/362 (40%), Gaps = 89/362 (24%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           L+ +T + P R+   LRY   +E G   V + SL   ++     P     R+  +PSG L
Sbjct: 175 LHIMTPVVPTRELSFLRYCKQIEQGLWAVADVSLDGQRDAHYGVP----SRSRRMPSGCL 230

Query: 294 IRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQKTTMAAL-RQLRQMAQEVT 351
           I     G S +  V+H+++E      VL R L  S         +AAL R   + A   T
Sbjct: 231 IADMSNGYSKVTWVEHLEIEHMLPINVLYRNLVLSGAAFGAHRWLAALQRACERFASLAT 290

Query: 352 -------QSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
                   + V   G+R  ++  LSQR+   F  +++    + WT++   G  DV+V V+
Sbjct: 291 LGVPHHDVAGVTPEGKR--SMMRLSQRMVSSFCASLSSSPLQRWTLL--SGTTDVSVCVS 346

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNID 462
           +        + S  +G P   N V+ + A+ +   VP   +  F+R+   RS+W     D
Sbjct: 347 T--------HRSTDSGQP---NGVVLSAATSIWLPVPGDHVFAFVRDENARSQW-----D 390

Query: 463 VYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM--- 519
           V S                   G+QV              EV ++   G +P + I    
Sbjct: 391 VLS------------------HGNQV-------------QEVSRIPN-GSNPGNCISLLR 418

Query: 520 -----PRDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRI 565
                   M +LQ     +  A  + A ++++PID   A+           PLLPSGF I
Sbjct: 419 GLNANQNSMLILQ-----ESCADASGALVVYSPIDIPAANVVMSGEDPSGIPLLPSGFAI 473

Query: 566 IP 567
           +P
Sbjct: 474 LP 475


>gi|16334|emb|CAA44513.1| Athb-3 [Arabidopsis thaliana]
          Length = 151

 Score = 48.1 bits (113), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 16/111 (14%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R   EQV ALE+ +    K    R+ QL +       ++P+QI +WFQNRR R K +
Sbjct: 52  KKKRLNLEQVRALEKSFELGNKLEPERKMQLAKAL----GLQPRQIAIWFQNRRARWKTK 107

Query: 77  KEASRLQAVNRK---LTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQST 124
           +      ++ ++   L + N  L+  N +L  +V  +         HT ST
Sbjct: 108 QLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAEVYNI---------HTNST 149


>gi|549889|gb|AAA56904.1| homeobox protein [Arabidopsis thaliana]
 gi|549890|gb|AAA56905.1| homeobox protein [Arabidopsis thaliana]
          Length = 315

 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 12/145 (8%)

Query: 6   KDGKTGSLDNG-KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 64
           +DG     D+  K +R + EQ   LE  + E    +  ++  L ++     N+  +Q++V
Sbjct: 150 EDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQL----NLRTRQVEV 205

Query: 65  WFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL--VYENGYFRQHTQ 122
           WFQNRR R K ++     + + R        L +EN RLQK+VS+L  +  + +   H +
Sbjct: 206 WFQNRRQRTKLKQTEVDCEYLKRCCEN----LTDENRRLQKEVSELRALKLSPHLYMHMK 261

Query: 123 STTLATKDTSCESV-VTSGQHHLTP 146
             T  T   SCE V VTS    + P
Sbjct: 262 PPTTLTMCPSCERVAVTSSPSSVAP 286


>gi|302780437|ref|XP_002971993.1| hypothetical protein SELMODRAFT_19476 [Selaginella moellendorffii]
 gi|300160292|gb|EFJ26910.1| hypothetical protein SELMODRAFT_19476 [Selaginella moellendorffii]
          Length = 87

 Score = 48.1 bits (113), Expect = 0.020,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 8/94 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + +QV +LE  +    K    R++QL  E      ++P+Q+ VWFQNRR R K +
Sbjct: 2   KKRRLSVDQVRSLELNFEMENKLEPERKKQLAHEL----GLQPRQVAVWFQNRRARWKTK 57

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           +    L+     L A    L+ EN +LQ +VS +
Sbjct: 58  Q----LERDYESLKASYDKLLLENKKLQAEVSSV 87


>gi|168038741|ref|XP_001771858.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676809|gb|EDQ63287.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 346

 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 8/110 (7%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWF 66
           D  TGS  N K  R T +QV +LE  +    K    ++ QL +E      + P+Q+ VWF
Sbjct: 87  DSPTGS-HNEKKRRLTLDQVRSLETSFEVVNKLEPEKKMQLAKEL----GLRPRQVAVWF 141

Query: 67  QNRRCREKQR---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYE 113
           QNRR R K +   ++   L A  + L A  + ++EE + L+ +V +L  E
Sbjct: 142 QNRRARWKTKQLERDYETLAADYKTLMADYEHVVEERNCLRAEVVRLTGE 191


>gi|116779239|gb|ABK21195.1| unknown [Picea sitchensis]
          Length = 309

 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 8/94 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K +R + EQ   LE  + E    +  ++Q L +      N+ P+Q++VWFQNRR R K +
Sbjct: 169 KKLRLSKEQSALLEESFKENSSLNPKQKQALAKRL----NLRPRQVEVWFQNRRARTKLK 224

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQL 110
           +     + + R   +    L +EN RLQK++ +L
Sbjct: 225 QTEVDCEFLKRCCES----LTDENRRLQKELQEL 254


>gi|224137880|ref|XP_002326463.1| predicted protein [Populus trichocarpa]
 gi|222833785|gb|EEE72262.1| predicted protein [Populus trichocarpa]
          Length = 302

 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 16/135 (11%)

Query: 6   KDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVW 65
           +DG+T      K +R + +Q   LE  + E    +  ++  L ++      + P+Q++VW
Sbjct: 131 EDGETSR----KKLRLSKDQAAILEESFKEHNTLNPKQKMALAKQL----GLRPRQVEVW 182

Query: 66  FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ---LVYENGYFRQHTQ 122
           FQNRR R K ++     + + R      + L EEN RLQK+V +   L     ++ Q T 
Sbjct: 183 FQNRRARTKLKQTEVDCEFLKR----CCENLTEENRRLQKEVQELRALKLSPQFYMQMTP 238

Query: 123 STTLATKDTSCESVV 137
            TTL T   SCE V 
Sbjct: 239 PTTL-TMCPSCERVA 252


>gi|212535846|ref|XP_002148079.1| homeobox transcription factor, putative [Talaromyces marneffei ATCC
           18224]
 gi|210070478|gb|EEA24568.1| homeobox transcription factor, putative [Talaromyces marneffei ATCC
           18224]
          Length = 545

 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 12/97 (12%)

Query: 11  GSLDNGKYV---RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
           G  DN K     R T  Q   L   +     P +  R++L RE P LS   P+Q++VWFQ
Sbjct: 171 GDEDNSKKTKRFRLTHNQTRFLMSEFTRQAHPDAAHRERLSREIPGLS---PRQVQVWFQ 227

Query: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQ 104
           NRR + K      RL + +R     ++ L +  DR Q
Sbjct: 228 NRRAKLK------RLTSQDRDRVLKSRALPDHFDRTQ 258


>gi|356538152|ref|XP_003537568.1| PREDICTED: homeobox-leucine zipper protein ATHB-40-like [Glycine
           max]
          Length = 215

 Score = 48.1 bits (113), Expect = 0.020,   Method: Composition-based stats.
 Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 9/106 (8%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
           G+ G+ +  K  + +  QV  LE+ +    K  S R+ +L  E      ++P+Q+ VWFQ
Sbjct: 48  GENGASEANKKRKLSEVQVNLLEQNFGNERKLESERKDRLAMEL----GLDPRQVAVWFQ 103

Query: 68  NRRCREKQRK---EASRLQAVNRKLTAMNKLLME-ENDRLQKQVSQ 109
           NRR R K +K   E S L+  N + T + K  +E E  +L++Q+S+
Sbjct: 104 NRRARWKNKKLEEEYSSLKK-NHEATLLEKCCLESEVLKLKEQLSE 148


>gi|363806696|ref|NP_001242266.1| uncharacterized protein LOC100808033 [Glycine max]
 gi|255647094|gb|ACU24015.1| unknown [Glycine max]
          Length = 295

 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 7/100 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV+ LE+ +    K    R+ QL R       ++P+QI +WFQNRR
Sbjct: 82  GSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRR 137

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQV 107
            R K ++       + R+  A+   N  L  +N +LQ ++
Sbjct: 138 ARWKTKQLEKDYDVLKRQYEAVKSDNDALQAQNQKLQAEI 177


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.133    0.398 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,588,883,329
Number of Sequences: 23463169
Number of extensions: 523476097
Number of successful extensions: 1362308
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 4173
Number of HSP's that attempted gapping in prelim test: 1356194
Number of HSP's gapped (non-prelim): 5650
length of query: 814
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 663
effective length of database: 8,816,256,848
effective search space: 5845178290224
effective search space used: 5845178290224
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)