BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048771
         (814 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9ZU11|ATB15_ARATH Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis thaliana
           GN=ATHB-15 PE=1 SV=1
          Length = 836

 Score = 1469 bits (3802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 717/840 (85%), Positives = 759/840 (90%), Gaps = 30/840 (3%)

Query: 1   MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPK 60
           MAMSCKDGK G LDNGKYVRYTPEQVEALERLYH+CPKPSSIRRQQLIRECPILSNIEPK
Sbjct: 1   MAMSCKDGKLGCLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPK 60

Query: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQH 120
           QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV+EN YFRQH
Sbjct: 61  QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQH 120

Query: 121 TQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEW 180
           T + +L  KDTSCESVVTSGQH L  Q+P RDASPAGLLSIAEETL EFLSKATGTAVEW
Sbjct: 121 TPNPSLPAKDTSCESVVTSGQHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEW 180

Query: 181 VQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------ 228
           VQMPGMKPGPDS+GI+AISHGC+GVAARACGLVGLEPTRVAEI+KDRP            
Sbjct: 181 VQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVM 240

Query: 229 ------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTM 276
                  G  +      LYA TTLAP RDFWLLRYTSVLEDGSLVVCERSLK+ QNGP+M
Sbjct: 241 NVLPTANGGTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSM 300

Query: 277 PPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTT 336
           P VQ+FVRAEML SGYLIRPC+GGGSIIHIVDHMDLE  SVPEVLRPLYES  VLAQKTT
Sbjct: 301 PLVQNFVRAEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTT 360

Query: 337 MAALRQLRQMAQEVTQ--SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGND 394
           MAALRQL+Q+AQEVTQ  SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW+V+G D
Sbjct: 361 MAALRQLKQIAQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-D 419

Query: 395 GMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS 454
            MDDVT+ VNSSPDKLMGLNL+FANGF  VSN VLCAKASMLLQNVPPAILLRFLREHRS
Sbjct: 420 SMDDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRS 479

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EWADNNID Y AAA+KVGPCS   +RVG FG QVILPLAHTIEHEEFMEVIKLEG+GHSP
Sbjct: 480 EWADNNIDAYLAAAVKVGPCS---ARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSP 536

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET 574
           EDAI+PRD+FLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS KE 
Sbjct: 537 EDAIVPRDIFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEV 596

Query: 575 SSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
           SSPNRTLDLASALEIG AG +A+ + S NSTC RSVMTIAFEF  ESHMQEHVA+MARQY
Sbjct: 597 SSPNRTLDLASALEIGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQY 656

Query: 635 VRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSE 694
           VR IISSVQRVALALSPS+ISSQ GLRTPLGTPEA TLARWIC SYR Y+GV+LLKS+S+
Sbjct: 657 VRGIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSD 716

Query: 695 GSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRK 754
           G+ESILKNLWHHTDA++CCS+KALPVFTFANQAGLDMLETTLVALQDI+LEKIFDD+GRK
Sbjct: 717 GNESILKNLWHHTDAIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRK 776

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            L +EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE AHCICF+FINWSFV
Sbjct: 777 TLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV 836


>sp|Q39123|ATHB8_ARATH Homeobox-leucine zipper protein ATHB-8 OS=Arabidopsis thaliana
           GN=ATHB-8 PE=1 SV=1
          Length = 833

 Score = 1307 bits (3382), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/840 (75%), Positives = 723/840 (86%), Gaps = 35/840 (4%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M      + ++DNGKYVRYTPEQVEALERLY++CPKPSS+RRQQLIRECPILSNIEPKQI
Sbjct: 1   MGGGSNNSHNMDNGKYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQI 60

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS LVYEN YFRQH Q
Sbjct: 61  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSYFRQHPQ 120

Query: 123 ST-TLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWV 181
           +   LAT DTSCESVVTSGQHHLTPQH PRDASPAGLLSIA+ETLTEF+SKATGTAVEWV
Sbjct: 121 NQGNLATTDTSCESVVTSGQHHLTPQHQPRDASPAGLLSIADETLTEFISKATGTAVEWV 180

Query: 182 QMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------- 228
           QMPGMKPGPDS+GIVAISHGC+G+AARACGLVGL+PTRVAEILKD+P             
Sbjct: 181 QMPGMKPGPDSIGIVAISHGCTGIAARACGLVGLDPTRVAEILKDKPCWLRDCRSLDIVN 240

Query: 229 -----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMP 277
                 G  +      LYA TTLAPARDFW+LRYTSV+EDGSLV+CERSL N QNGP+MP
Sbjct: 241 VLSTANGGTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGPSMP 300

Query: 278 PVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTM 337
           P  HFVRAE+LPSGYLIRPCEGGGSI+HIVDH DLEPWSVPEVLR LYESST+LAQ+TTM
Sbjct: 301 PSPHFVRAEILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRTTM 360

Query: 338 AALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
           AALR LRQ++QE++Q +V GWGRRPAALRALSQRLS+GFNEAVNGF+DEGW+++ +DG+D
Sbjct: 361 AALRYLRQISQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFSDEGWSILESDGID 420

Query: 398 DVTVLVNSSPDKLMGL-NLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEW 456
           DVT+LVNSSP K+M   +L FANG+ ++ +AVLCAKASMLLQNVPP+ILLRFLREHR EW
Sbjct: 421 DVTLLVNSSPTKMMMTSSLPFANGYTSMPSAVLCAKASMLLQNVPPSILLRFLREHRQEW 480

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
           ADN+ID YSAAAIK GPCSLP  R G+FG QVILPLAHTIE+EEFMEVIKLE +GH  ED
Sbjct: 481 ADNSIDAYSAAAIKAGPCSLPIPRPGSFGGQVILPLAHTIENEEFMEVIKLESLGHYQED 540

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSS 576
            +MP D+FLLQ+CSG+DENAV +CAELIFAPIDASF+DDAP++PSGFRIIPLDS  E  S
Sbjct: 541 MMMPADIFLLQMCSGVDENAVESCAELIFAPIDASFSDDAPIIPSGFRIIPLDSKSEGLS 600

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
           PNRTLDLASAL++   G+R   +   +    +SVMTIAF+ AFE HMQE+VA+MARQYVR
Sbjct: 601 PNRTLDLASALDV---GSRTAGDSCGSRGNSKSVMTIAFQLAFEMHMQENVASMARQYVR 657

Query: 637 SIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS 696
           S+I+SVQRVALALSPS+    +GLR P  +PEA TLARWI HSYRCYLGVDLLK    G+
Sbjct: 658 SVIASVQRVALALSPSS-HQLSGLRPPPASPEAHTLARWISHSYRCYLGVDLLK--PHGT 714

Query: 697 ESILKNLWHHTDAVMCCSLKAL-PVFTFANQAGLDMLETTLVALQDITLEKIFD-DHGRK 754
           + +LK+LWHH DAVMCCSLKAL PVFTFANQAGLDMLETTLVALQDITL+KIFD ++G+K
Sbjct: 715 D-LLKSLWHHPDAVMCCSLKALSPVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGKK 773

Query: 755 ALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
            L +EFPQIMQQGF C+ GGIC+SSMGR V+YE+AV WKVLN++E  HCICFMF+NWSF+
Sbjct: 774 TLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNWSFI 833


>sp|Q6AST1|HOX32_ORYSJ Homeobox-leucine zipper protein HOX32 OS=Oryza sativa subsp.
           japonica GN=HOX32 PE=2 SV=1
          Length = 859

 Score = 1169 bits (3025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 568/839 (67%), Positives = 675/839 (80%), Gaps = 34/839 (4%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
           G    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 23  GGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQ 82

Query: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA 127
           NRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS+LVYENGY RQ   + ++A
Sbjct: 83  NRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQLHNPSVA 142

Query: 128 TKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           T DTSCESVVTSGQHH         P RDA+ PAGLL+IAEETL EFLSKATGTAV+WVQ
Sbjct: 143 TTDTSCESVVTSGQHHQQQNPAATRPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQ 202

Query: 183 MPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------------- 228
           M GMKPGPDS+GI+A+SH CSGVAARACGLV LEPT+VAEILKDRP              
Sbjct: 203 MVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDVLHV 262

Query: 229 ----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPP 278
                G  I       YA TTLA  RDFW+LRYTS LEDGSLV+CERSL     GP+ P 
Sbjct: 263 IPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQSTGGPSGPN 322

Query: 279 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA 338
             +FVRAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYES  +LAQK T+A
Sbjct: 323 TPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIA 382

Query: 339 ALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD 398
           ALR +RQ+A E +     G GR+PA LR  SQRLSRGFN+AVNGF D+GW++M +DG +D
Sbjct: 383 ALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAED 442

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 458
           VT+  NSSP+KL+G +++ +  F A+   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD
Sbjct: 443 VTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWAD 502

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA 517
             +D YSAAA++  P ++PG R G F GSQVILPLAHT+EHEEF+EVI+LEG     ++ 
Sbjct: 503 PGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEV 562

Query: 518 IMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSP 577
           ++ RDM+LLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD   +  S 
Sbjct: 563 VLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDGKTDAPSA 622

Query: 578 NRTLDLASALEIGPAGN-RATNNYSTNSTC-MRSVMTIAFEFAFESHMQEHVATMARQYV 635
            RTLDLAS LE+G  G  RA+++  T+STC  RSV+TIAF+F++E+H++E VA MARQYV
Sbjct: 623 TRTLDLASTLEVGSGGTTRASSD--TSSTCNTRSVLTIAFQFSYENHLRESVAAMARQYV 680

Query: 636 RSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEG 695
           R++++SVQRVA+A++PS +  Q   + P G+PEA TLARWI  SYR + G DLL++ S+ 
Sbjct: 681 RTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHTGADLLRTDSQS 740

Query: 696 SESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKA 755
           ++S LK +W H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKA
Sbjct: 741 TDSSLKAMWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKA 800

Query: 756 LFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           L  EFP+IMQQGFA L GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FMF+NWSFV
Sbjct: 801 LCTEFPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 859


>sp|A2XK30|HOX32_ORYSI Homeobox-leucine zipper protein HOX32 OS=Oryza sativa subsp. indica
           GN=HOX32 PE=2 SV=1
          Length = 859

 Score = 1168 bits (3021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 568/839 (67%), Positives = 674/839 (80%), Gaps = 34/839 (4%)

Query: 8   GKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67
           G    +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQ
Sbjct: 23  GGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQ 82

Query: 68  NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLA 127
           NRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS+LVYENGY RQ   + ++A
Sbjct: 83  NRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQLHNPSVA 142

Query: 128 TKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQ 182
           T DTSCESVVTSGQHH         P RDA+ PAGLL+IAEETL EFLSKATGTAV+WVQ
Sbjct: 143 TTDTSCESVVTSGQHHQQQNPAATRPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQ 202

Query: 183 MPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------------- 228
           M GMKPGPDS+GI+A+SH CSGVAARACGLV LEPT+VAEILKDRP              
Sbjct: 203 MVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDVLHV 262

Query: 229 ----RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPP 278
                G  I       YA TTLA  RDFW+LRYTS LEDGSLV+CERSL     GP+ P 
Sbjct: 263 IPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQSTGGPSGPN 322

Query: 279 VQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMA 338
             +FVRAE+LPSGYLIRPCEGGGS+IHIVDH+DL+ WSVPEVLRPLYES  +LAQK T+A
Sbjct: 323 TPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIA 382

Query: 339 ALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD 398
           ALR +RQ+A E +     G GR+PA LR  SQRLSRGFN+AVNGF D+GW++M +DG +D
Sbjct: 383 ALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAED 442

Query: 399 VTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWAD 458
           VT+  NSSP+KL+G +++ +  F A+   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD
Sbjct: 443 VTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWAD 502

Query: 459 NNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDA 517
             +D YSAAA++  P ++PG R G F GSQVILPLAHT+EHEEF+EVI+LEG     ++ 
Sbjct: 503 PGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEV 562

Query: 518 IMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSP 577
           ++ RDM+LLQLCSG+DENA G CA+L+FAPID SFADDAPLLPSGFR+IPLD   +  S 
Sbjct: 563 VLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDGKTDAPSA 622

Query: 578 NRTLDLASALEIGPAGN-RATNNYSTNSTC-MRSVMTIAFEFAFESHMQEHVATMARQYV 635
            RTLDLAS LE+G  G  RA+++  T+STC  RSV+TIAF+F++E+H++E VA MARQYV
Sbjct: 623 TRTLDLASTLEVGSGGTTRASSD--TSSTCNTRSVLTIAFQFSYENHLRESVAAMARQYV 680

Query: 636 RSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEG 695
           R++++SVQRVA+A++PS +  Q   + P G+PEA TLARWI  SYR + G DLL++ S+ 
Sbjct: 681 RTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHTGADLLRTDSQS 740

Query: 696 SESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKA 755
            +S LK +W H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKA
Sbjct: 741 MDSSLKAMWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKA 800

Query: 756 LFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           L  EFP+IMQQGFA L GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FMF+NWSFV
Sbjct: 801 LCTEFPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 859


>sp|Q2QM96|HOX33_ORYSJ Homeobox-leucine zipper protein HOX33 OS=Oryza sativa subsp.
           japonica GN=HOX33 PE=2 SV=1
          Length = 855

 Score = 1122 bits (2903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/833 (65%), Positives = 656/833 (78%), Gaps = 33/833 (3%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 25  VDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEASRLQ VNRKL AMNKLLMEENDRLQKQVS+LVYENGY R    + + AT DTS
Sbjct: 85  EKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSRLVYENGYMRTQLHNPSAATTDTS 144

Query: 133 CESVVTSGQHHLTPQ----HPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
           CESVVTSGQHH        HP RDA+ PAGLL+IAEETL EF+SKATGTAVEWVQM GMK
Sbjct: 145 CESVVTSGQHHQQQNPAVLHPQRDANNPAGLLAIAEETLAEFMSKATGTAVEWVQMVGMK 204

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDS+GI+A+SH CSGVAARACGLV LEPT+VAEILKDRP                   
Sbjct: 205 PGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDIIHVIPTGN 264

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I       YA TTLA  RDFW LRYTS LEDGSLV+CERSL     GP+ P   +F+
Sbjct: 265 GGTIELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFI 324

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAE+LPSGYLIRPCEGGGS+I+IVDH+DL+ WSVPEVLRPLYES  +LAQK T+AALR +
Sbjct: 325 RAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALRHI 384

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+A E +     G GR+PA  R  SQRLSRGFN+AV+GF D+GW+++ +DG +D+T+ V
Sbjct: 385 RQIAHESSGEIPYGAGRQPAVFRTFSQRLSRGFNDAVSGFPDDGWSLLSSDGSEDITISV 444

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NSSP+KL+G ++S    F  V   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD  +D 
Sbjct: 445 NSSPNKLVGSHVSPNPLFSTVGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDA 504

Query: 464 YSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           YSAA+++  P ++PG R   F GSQVILPLAHT+EHEEF+EVI+LEG G S ++ ++ RD
Sbjct: 505 YSAASLRASPYAVPGLRTSGFMGSQVILPLAHTLEHEEFLEVIRLEGHGFSHDEVLLSRD 564

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           M+LLQLCSG+DENA    A+L+FAPID SFADDAPLLPSGFR+IPLD+  +  S  RTLD
Sbjct: 565 MYLLQLCSGVDENATSASAQLVFAPIDESFADDAPLLPSGFRVIPLDTKMDGPSATRTLD 624

Query: 583 LASALEIGPAG-NRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISS 641
           LASALE+GP G +RA+     + TC RSV+TIAF+F++E+H++E VA MAR YVR++++S
Sbjct: 625 LASALEVGPGGASRAS--VEASGTCNRSVLTIAFQFSYENHLRESVAAMARSYVRAVMAS 682

Query: 642 VQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILK 701
           VQRVA+A++PS +  Q G++ P  +PEALTLA WI  SYR + G D+  S +E ++S L 
Sbjct: 683 VQRVAVAIAPSRLGPQIGMKHPPASPEALTLASWIGRSYRAHTGADIRWSDTEDADSPLA 742

Query: 702 NLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFP 761
            LW H+DA++CCSLK  P+FTFAN AGLD+LETTLV LQDI+LE I DD GRKAL +EFP
Sbjct: 743 LLWKHSDAILCCSLKPAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFP 802

Query: 762 QIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +IMQQGF  L GG+C SSMGR  SYE+AVAWKVL++++  HC+ FM +NW+F+
Sbjct: 803 KIMQQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM 855


>sp|A2ZMN9|HOX33_ORYSI Homeobox-leucine zipper protein HOX33 OS=Oryza sativa subsp. indica
           GN=HOX33 PE=2 SV=2
          Length = 855

 Score = 1122 bits (2903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/833 (65%), Positives = 656/833 (78%), Gaps = 33/833 (3%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 25  VDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           EKQRKEASRLQ VNRKL AMNKLLMEENDRLQKQVS+LVYENGY R    + + AT DTS
Sbjct: 85  EKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSRLVYENGYMRTQLHNPSAATTDTS 144

Query: 133 CESVVTSGQHHLTPQ----HPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMK 187
           CESVVTSGQHH        HP RDA+ PAGLL+IAEETL EF+SKATGTAVEWVQM GMK
Sbjct: 145 CESVVTSGQHHQQQNPAVLHPQRDANNPAGLLAIAEETLAEFMSKATGTAVEWVQMVGMK 204

Query: 188 PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------R 229
           PGPDS+GI+A+SH CSGVAARACGLV LEPT+VAEILKDRP                   
Sbjct: 205 PGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDIIHVIPTGN 264

Query: 230 GSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFV 283
           G  I       YA TTLA  RDFW LRYTS LEDGSLV+CERSL     GP+ P   +F+
Sbjct: 265 GGTIELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFI 324

Query: 284 RAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQL 343
           RAE+LPSGYLIRPCEGGGS+I+IVDH+DL+ WSVPEVLRPLYES  +LAQK T+AALR +
Sbjct: 325 RAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALRHI 384

Query: 344 RQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           RQ+A E +     G GR+PA  R  SQRLSRGFN+AV+GF D+GW+++ +DG +D+T+ V
Sbjct: 385 RQIAHESSGEIPYGAGRQPAVFRTFSQRLSRGFNDAVSGFPDDGWSLLSSDGSEDITISV 444

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDV 463
           NSSP+KL+G ++S    F  V   +LCAKASMLLQNVPPA+L+RFLREHRSEWAD  +D 
Sbjct: 445 NSSPNKLVGSHVSPNPLFSTVGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDA 504

Query: 464 YSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRD 522
           YSAA+++  P ++PG R   F GSQVILPLAHT+EHEEF+EVI+LEG G S ++ ++ RD
Sbjct: 505 YSAASLRASPYAVPGLRTSGFMGSQVILPLAHTLEHEEFLEVIRLEGHGFSHDEVLLSRD 564

Query: 523 MFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLD 582
           M+LLQLCSG+DENA    A+L+FAPID SFADDAPLLPSGFR+IPLD+  +  S  RTLD
Sbjct: 565 MYLLQLCSGVDENATSASAQLVFAPIDESFADDAPLLPSGFRVIPLDTKMDGPSATRTLD 624

Query: 583 LASALEIGPAG-NRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISS 641
           LASALE+GP G +RA+     + TC RSV+TIAF+F++E+H++E VA MAR YVR++++S
Sbjct: 625 LASALEVGPGGASRAS--VEASGTCNRSVLTIAFQFSYENHLRESVAAMARSYVRAVMAS 682

Query: 642 VQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILK 701
           VQRVA+A++PS +  Q G++ P  +PEALTLA WI  SYR + G D+  S +E ++S L 
Sbjct: 683 VQRVAVAIAPSRLGPQIGMKHPPASPEALTLASWIGRSYRAHTGADIRWSDTEDADSPLA 742

Query: 702 NLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFP 761
            LW H+DA++CCSLK  P+FTFAN AGLD+LETTLV LQDI+LE I DD GRKAL +EFP
Sbjct: 743 LLWKHSDAILCCSLKPAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFP 802

Query: 762 QIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           +IMQQGF  L GG+C SSMGR  SYE+AVAWKVL++++  HC+ FM +NW+F+
Sbjct: 803 KIMQQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM 855


>sp|A2WLR5|HOX29_ORYSI Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. indica
           GN=HOX29 PE=2 SV=2
          Length = 861

 Score = 1106 bits (2861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 558/865 (64%), Positives = 675/865 (78%), Gaps = 67/865 (7%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+RECP L+N++PKQIKVWFQNRRCR
Sbjct: 1   MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCR 60

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENG----------------- 115
           EKQRKE+SRLQA+NRKLTAMNKLLMEENDRLQKQVSQLVY++G                 
Sbjct: 61  EKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPAFP 120

Query: 116 YFRQHTQSTTLAT-KDTSCESVVTSGQHHLTP-----QHPPRDASPAGLLSIAEETLTEF 169
                     LAT  DTSCESVVTSG HH        Q PPRDASPAGL+SIAEETLTEF
Sbjct: 121 PQAAAAAGHQLATATDTSCESVVTSGHHHQQQQHNVVQPPPRDASPAGLMSIAEETLTEF 180

Query: 170 LSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP- 228
           LSKATGTAVEW+QMPGMKPGPDS+GI+AISHGC+GVAARACGLVG+EP +VAEILKDRP 
Sbjct: 181 LSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDRPL 240

Query: 229 -----RGSAI------------------LYALTTLAPARDFWLLRYTSVLEDGSLVVCER 265
                R   +                  LYA TTLAPARDFWLLRYTS+L+DGSLVVCER
Sbjct: 241 WLRDCRSMDVVNVLPAGANGTIELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVCER 300

Query: 266 SLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 325
           SL + Q GP+MP VQ F+R EMLPSG+LIRP +GGGS+IHIVDHMDLEPWSVPEV+RPLY
Sbjct: 301 SLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLY 360

Query: 326 ESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTD 385
           ESS ++AQK +MAALR LRQ+A E T+S + GWGR+PAALRALSQ+L+RGFNEA+NG  D
Sbjct: 361 ESSAMVAQKISMAALRYLRQVAHEDTRSVITGWGRQPAALRALSQKLTRGFNEALNGLAD 420

Query: 386 EGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAIL 445
           +GW+V+ +DG+DDV + VNSS  K++G N +F++G P VS  VLCAKASMLLQ+V P  L
Sbjct: 421 DGWSVIESDGVDDVCISVNSS--KVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPPSL 478

Query: 446 LRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVI 505
           L+FLREHRS+WAD+N+D + A+A+K   C+LP SR+G F  QVILPLAHT E EEF+EVI
Sbjct: 479 LQFLREHRSQWADSNLDAFFASAMKPNFCNLPMSRLGGFSGQVILPLAHTFEPEEFLEVI 538

Query: 506 KLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRI 565
           KL G   + +D ++ RD+FLLQ+ +G++E++ GTC+ELIFAPIDASF+DD+PLLPSGFRI
Sbjct: 539 KL-GNASNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSPLLPSGFRI 597

Query: 566 IPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTC--------MRSVMTIAFEF 617
           IP+DS  +TSSPN TLDLAS LE     +R +       TC         ++VMTIAF+F
Sbjct: 598 IPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVNGGGGTCAAAAASSSSKAVMTIAFQF 657

Query: 618 AFESHMQEHVATMARQYVRSIISSVQRVALALS-----PSNISSQAGLRTPLGTPEALTL 672
           AF+ H+Q+ VA MARQY+R+IISSVQR+A+ALS     P   ++ A   +P+ TPEA TL
Sbjct: 658 AFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAAAAAAQLSPV-TPEAATL 716

Query: 673 ARWICHSYRCYLGVDLLKS--SSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLD 730
            RWIC SYR + G +L+KS  ++  +ESILK +WHH  A++CCSLKA+PVFTFANQ+GLD
Sbjct: 717 PRWICQSYRFHFGAELIKSVDANSSNESILKAVWHHPSAILCCSLKAMPVFTFANQSGLD 776

Query: 731 MLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAV 790
           MLETTLVALQD+TLEK+FDD GRK L  E P IM+QG AC++GG+C+SS+GR  SYE+AV
Sbjct: 777 MLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQGMACMEGGVCVSSVGRAASYEKAV 836

Query: 791 AWKVLN-EEETAHCICFMFINWSFV 814
           AWKV++ +   AHCI FMFINW+F+
Sbjct: 837 AWKVVDGDGGGAHCISFMFINWTFL 861


>sp|Q5QMZ9|HOX29_ORYSJ Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp.
           japonica GN=HOX29 PE=2 SV=2
          Length = 868

 Score = 1100 bits (2846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/867 (64%), Positives = 673/867 (77%), Gaps = 67/867 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
            ++D  KYVRYTPEQVEALERLY+ECPKPSS+RRQQL+RECP L+N++PKQIKVWFQNRR
Sbjct: 6   AAMDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRR 65

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENG--------------- 115
           CREKQRKE+SRLQA+NRKLTAMNKLLMEENDRLQKQVSQLVY++G               
Sbjct: 66  CREKQRKESSRLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRHGVAAAGMMRRVPA 125

Query: 116 --YFRQHTQSTTLAT-KDTSCESVVTSGQHHLTP-----QHPPRDASPAGLLSIAEETLT 167
                       LAT  DTSCESVVTSG HH        Q PPRDASPAGL+SIAEETLT
Sbjct: 126 FPPQAAAAAGHQLATATDTSCESVVTSGHHHQQQQHNVVQPPPRDASPAGLMSIAEETLT 185

Query: 168 EFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDR 227
           EFLSKATGTAVEW+QMPGMKPGPDS+GI+AISHGC+GVAARACGLVG+EP +VAEILKDR
Sbjct: 186 EFLSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPAKVAEILKDR 245

Query: 228 P------RGSAI------------------LYALTTLAPARDFWLLRYTSVLEDGSLVVC 263
           P      R   +                  LYA TTLAPARDFWLLRYTS+L+DGSLVVC
Sbjct: 246 PLWLRDCRSMDVVNVLPAGANGTIELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVC 305

Query: 264 ERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRP 323
           ERSL + Q GP+MP VQ F+R EMLPSG+LIRP + GGS+IHIVDHMDLEPWSVPEV+RP
Sbjct: 306 ERSLSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDVGGSVIHIVDHMDLEPWSVPEVVRP 365

Query: 324 LYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGF 383
           LYESS ++AQK +MAALR LRQ+A E T+S + GWGR+PAALRALSQ+L+RGFNEA+NG 
Sbjct: 366 LYESSAMVAQKISMAALRYLRQVAHEDTRSVITGWGRQPAALRALSQKLTRGFNEALNGL 425

Query: 384 TDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPA 443
            D+GW+V+ +DG+DDV + VNSS  K++G N +F++G P VS  VLCAKASMLLQ+V P 
Sbjct: 426 ADDGWSVIESDGVDDVCISVNSS--KVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPP 483

Query: 444 ILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFME 503
            LL+FLREHRS+WAD+N+D + A+ +K   C+LP SR+G F  QVILPLAHT E EEF+E
Sbjct: 484 SLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSRLGGFSGQVILPLAHTFEPEEFLE 543

Query: 504 VIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGF 563
           VIKL G   + +D ++ RD+FLLQ+ +G++E++ GTC+ELIFAPIDASF+DD+PLLPSGF
Sbjct: 544 VIKL-GNASNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSPLLPSGF 602

Query: 564 RIIPLDSGKETSSPNRTLDLASALEIGPAGNR--------ATNNYSTNSTCMRSVMTIAF 615
           RIIP+DS  +TSSPN TLDLAS LE     +R             +  S+  ++VMTIAF
Sbjct: 603 RIIPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVNGGGGGCAAAAASSSSKAVMTIAF 662

Query: 616 EFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLR-----TPLGTPEAL 670
           +FAF+ H+Q+ VA MARQY+R+IISSVQR+A+ALS S +            +P+ TPEA 
Sbjct: 663 QFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAGAAAAQLSPV-TPEAA 721

Query: 671 TLARWICHSYRCYLGVDLLKS--SSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAG 728
           TL RWIC SYR + G +L+KS  ++  +ESILK +WHH  A++CCSLKA+PVFTFANQ+G
Sbjct: 722 TLPRWICQSYRFHFGDELIKSVDANSSNESILKAVWHHPSAILCCSLKAMPVFTFANQSG 781

Query: 729 LDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYER 788
           LDMLETTLVALQD+TLEK+FDD GRK L  E P IM+QG AC++GG+C+SS+GR  SYE+
Sbjct: 782 LDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQGMACMEGGVCVSSVGRAASYEK 841

Query: 789 AVAWKVLN-EEETAHCICFMFINWSFV 814
           AVAWKV++ +   AHCICFMFINW+F+
Sbjct: 842 AVAWKVVDGDGGGAHCICFMFINWTFL 868


>sp|O04291|ATB14_ARATH Homeobox-leucine zipper protein ATHB-14 OS=Arabidopsis thaliana
           GN=ATHB-14 PE=1 SV=1
          Length = 852

 Score = 1076 bits (2783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/848 (64%), Positives = 644/848 (75%), Gaps = 42/848 (4%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           M  ++     LD+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPILSNIEPKQI
Sbjct: 11  MMNRESPDKGLDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQI 70

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
           KVWFQNRRCREKQRKEA+RLQ VNRKL AMNKLLMEENDRLQKQVS LVYENG+ +    
Sbjct: 71  KVWFQNRRCREKQRKEAARLQTVNRKLNAMNKLLMEENDRLQKQVSNLVYENGHMKHQLH 130

Query: 123 STTLATKDTSCESVVTSGQHHLTPQHPP----RDAS-PAGLLSIAEETLTEFLSKATGTA 177
           + +  T D SCESVV SGQ H      P    RDA+ PAGLLSIAEE L EFLSKATGTA
Sbjct: 131 TASGTTTDNSCESVVVSGQQHQQQNPNPQHQQRDANNPAGLLSIAEEALAEFLSKATGTA 190

Query: 178 VEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP--------- 228
           V+WVQM GMKPGPDS+GIVAIS  CSG+AARACGLV LEP +VAEILKDRP         
Sbjct: 191 VDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLVSLEPMKVAEILKDRPSWLRDCRSV 250

Query: 229 ---------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNG 273
                     G  I      +YA TTLA ARDFW LRY++ LEDGS VVCERSL +   G
Sbjct: 251 DTLSVIPAGNGGTIELIYTQMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSLTSATGG 310

Query: 274 PTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQ 333
           PT PP  +FVRAEM PSG+LIRPC+GGGSI+HIVDH+DL+ WSVPEV+RPLYESS +LAQ
Sbjct: 311 PTGPPSSNFVRAEMKPSGFLIRPCDGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQ 370

Query: 334 KTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGN 393
           K T+AALR +RQ+AQE +     G GR+PA LR  SQRL RGFN+AVNGF D+GW+ MG+
Sbjct: 371 KMTVAALRHVRQIAQETSGEVQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMGS 430

Query: 394 DGMDDVTVLVNSSPDKLMGLNLSFANGF-PAVSNAVLCAKASMLLQNVPPAILLRFLREH 452
           DG +DVTV++N SP K  G    + N F P+  + VLCAKASMLLQNVPPA+L+RFLREH
Sbjct: 431 DGAEDVTVMINLSPGKFGGSQ--YGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLREH 488

Query: 453 RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGVG 511
           RSEWAD  +D Y+AA+++  P ++P +R G F S QVILPLA T+EHEE +EV++LEG  
Sbjct: 489 RSEWADYGVDAYAAASLRASPFAVPCARAGGFPSNQVILPLAQTVEHEESLEVVRLEGHA 548

Query: 512 HSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLD-- 569
           +SPED  + RDM+LLQLCSG+DEN VG CA+L+FAPID SFADDAPLLPSGFRIIPL+  
Sbjct: 549 YSPEDMGLARDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRIIPLEQK 608

Query: 570 SGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVAT 629
           S    +S NRTLDLASALE      R       N    RSV+TIAF+F F++H ++ VA+
Sbjct: 609 STPNGASANRTLDLASALE---GSTRQAGEADPNGCNFRSVLTIAFQFTFDNHSRDSVAS 665

Query: 630 MARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLL 689
           MARQYVRSI+ S+QRVALA++P   S+ + +  P  +PEALTL RWI  SY  + G DL 
Sbjct: 666 MARQYVRSIVGSIQRVALAIAPRPGSNISPISVPT-SPEALTLVRWISRSYSLHTGADLF 724

Query: 690 KSSSEGS-ESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDITLEK 746
            S S+ S +++L  LW+H+DA++CCSLK  A PVFTFANQ GLDMLETTLVALQDI L+K
Sbjct: 725 GSDSQTSGDTLLHQLWNHSDAILCCSLKTNASPVFTFANQTGLDMLETTLVALQDIMLDK 784

Query: 747 IFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICF 806
             D+ GRKAL +EFP+IMQQG+A L  G+C SSMGR VSYE+A  WKVL ++E+ HC+ F
Sbjct: 785 TLDEPGRKALCSEFPKIMQQGYAHLPAGVCASSMGRMVSYEQATVWKVLEDDESNHCLAF 844

Query: 807 MFINWSFV 814
           MF+NWSFV
Sbjct: 845 MFVNWSFV 852


>sp|A2XBL9|HOX10_ORYSI Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. indica
           GN=HOX10 PE=2 SV=2
          Length = 839

 Score = 1075 bits (2781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 530/844 (62%), Positives = 647/844 (76%), Gaps = 41/844 (4%)

Query: 1   MAMSCKDG----KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSN 56
           M  S  DG    K   +D+GKYVRYTPEQVEALER+Y +CPKP+S RRQQL+RECPIL+N
Sbjct: 7   MRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILAN 66

Query: 57  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGY 116
           IEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN +
Sbjct: 67  IEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAH 126

Query: 117 FRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATG 175
            RQ  Q+T LA  DTSCES VT      TPQ+P RDAS P+GLLSIAEETLTEFLSKATG
Sbjct: 127 MRQQLQNTPLA-NDTSCESNVT------TPQNPLRDASNPSGLLSIAEETLTEFLSKATG 179

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------- 228
           TA++WVQMPGMKPGPDSVGIVAISHGC GVAARACGLV LEPT+V EILKDRP       
Sbjct: 180 TAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCR 239

Query: 229 -----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  +      LYA TTL PARDFW LRYT+ +EDGSLVVCERSL    
Sbjct: 240 NLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSG 299

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GP+    Q +VRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+
Sbjct: 300 GGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVV 359

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQK T AALR +RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW++M
Sbjct: 360 AQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIM 419

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           G DG++DV +  NS+       N   A G P     ++CAKASMLLQ+VPPA+L+RFLRE
Sbjct: 420 GGDGVEDVVIACNSTKKIRSNSNAGIAFGAPG---GIICAKASMLLQSVPPAVLVRFLRE 476

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGV 510
           HRSEWAD NID Y A+ +K   CSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG 
Sbjct: 477 HRSEWADYNIDAYLASTLKTSACSLPGLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQ 536

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
             + ++A++ RD+ LLQLC+G+DE +VG+  +L+FAPID  F D+ PL+ SGFR+IPLD 
Sbjct: 537 PLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID-DFPDETPLISSGFRVIPLDM 595

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
             + +S  RTLDLAS+LE+G A  +A+ + S +   +RSV+TIAF+F +E H+Q+ VA M
Sbjct: 596 KTDGASSGRTLDLASSLEVGSATAQASGDASADDCNLRSVLTIAFQFPYELHLQDSVAAM 655

Query: 631 ARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLK 690
           ARQYVRSI+S+VQRV++A+SPS     AG R   G PEA TLARW+C SY  +LGV+LL 
Sbjct: 656 ARQYVRSIVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLS 715

Query: 691 SSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDD 750
            S   +E +LK LWH+ DA++CCS K  PVFTFAN+AGLDMLET+LVALQD+TL++IFD+
Sbjct: 716 QSDGDAEQLLKMLWHYQDAILCCSFKEKPVFTFANKAGLDMLETSLVALQDLTLDRIFDE 775

Query: 751 HGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFIN 810
            G++ALF+  P++M+QG   L  G+C+S MGR VS+++AVAWKVL E+   HC+ F F+N
Sbjct: 776 PGKEALFSNIPKLMEQGHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVN 835

Query: 811 WSFV 814
           WSFV
Sbjct: 836 WSFV 839


>sp|Q6TAQ6|HOX10_ORYSJ Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp.
           japonica GN=HOX10 PE=2 SV=1
          Length = 839

 Score = 1073 bits (2774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/844 (62%), Positives = 646/844 (76%), Gaps = 41/844 (4%)

Query: 1   MAMSCKDG----KTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSN 56
           M  S  DG    K   +D+GKYVRYTPEQVEALER+Y +CPKP+S RRQQL+RECPIL+N
Sbjct: 7   MRGSSSDGGGYDKVSGMDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILAN 66

Query: 57  IEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGY 116
           IEPKQIKVWFQNRRCR+KQRKE+SRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN +
Sbjct: 67  IEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAH 126

Query: 117 FRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATG 175
            RQ  Q+T LA  DTSCES VT      TPQ+P RDAS P+GLLSIAEETLTEFLSKATG
Sbjct: 127 MRQQLQNTPLA-NDTSCESNVT------TPQNPLRDASNPSGLLSIAEETLTEFLSKATG 179

Query: 176 TAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------- 228
           TA++WVQMPGMKPGPDSVGIVAISHGC GVAARACGLV LEPT+V EILKDRP       
Sbjct: 180 TAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCR 239

Query: 229 -----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ 271
                       G  +      LYA TTL PARDFW LRYT+ +EDGSLVVCERSL    
Sbjct: 240 NLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSG 299

Query: 272 NGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVL 331
            GP+    Q +VRAEMLPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+
Sbjct: 300 GGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVV 359

Query: 332 AQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM 391
           AQK T AALR +RQ+AQE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW++M
Sbjct: 360 AQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIM 419

Query: 392 GNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           G DG++DV +  NS+       N   A G P     ++CAKASMLLQ+VPPA+L+RFLRE
Sbjct: 420 GGDGVEDVVIACNSTKKIRSNSNAGIAFGAPG---GIICAKASMLLQSVPPAVLVRFLRE 476

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGV 510
           HRSEWAD NID Y A+ +K   CSL G R   F GSQ+I+PLAHT+E+EE +EV++LEG 
Sbjct: 477 HRSEWADYNIDAYLASTLKTSACSLTGLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQ 536

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
             + ++A++ RD+ LLQLC+G+DE +VG+  +L+FAPID  F D+ PL+ SGFR+IPLD 
Sbjct: 537 PLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPID-DFPDETPLISSGFRVIPLDM 595

Query: 571 GKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATM 630
             + +S  RTLDLAS+LE+G A  +A+ + S +   +RSV+TIAF+F +E H+Q+ VA M
Sbjct: 596 KTDGASSGRTLDLASSLEVGSATAQASGDASADDCNLRSVLTIAFQFPYELHLQDSVAAM 655

Query: 631 ARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLK 690
           ARQYVRSI+S+VQRV++A+SPS     AG R   G PEA TLARW+C SY  +LGV+LL 
Sbjct: 656 ARQYVRSIVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLS 715

Query: 691 SSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDD 750
            S   +E +LK LWH+ DA++CCS K  PVFTFAN+AGLDMLET+LVALQD+TL++IFD+
Sbjct: 716 QSDGDAEQLLKMLWHYQDAILCCSFKEKPVFTFANKAGLDMLETSLVALQDLTLDRIFDE 775

Query: 751 HGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFIN 810
            G++ALF+  P++M+QG   L  G+C+S MGR VS+++AVAWKVL E+   HC+ F F+N
Sbjct: 776 PGKEALFSNIPKLMEQGHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVN 835

Query: 811 WSFV 814
           WSFV
Sbjct: 836 WSFV 839


>sp|A2Z8L4|HOX9_ORYSI Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. indica
           GN=HOX9 PE=2 SV=2
          Length = 840

 Score = 1072 bits (2771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/828 (63%), Positives = 644/828 (77%), Gaps = 38/828 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D+GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNRRCR
Sbjct: 25  MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCR 84

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           +KQRKEASRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN Y +Q  Q+ +L   DTS
Sbjct: 85  DKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLG-NDTS 143

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CES VT      TPQ+P RDAS P+GLL+IAEETLTEFLSKATGTAV+WV MPGMKPGPD
Sbjct: 144 CESNVT------TPQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPD 197

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           S GIVA+SHGC GVAARACGLV LEPT++ EILKDRP                   G  I
Sbjct: 198 SFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTI 257

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 +YA TTL PARDFW LRYT+ ++DGSLVVCERSL     GP+    Q FVRAEM
Sbjct: 258 ELVYMQMYAPTTLVPARDFWTLRYTTTMDDGSLVVCERSLSGSGGGPSTASAQQFVRAEM 317

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T AALR +RQ+A
Sbjct: 318 LPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIA 377

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV +  N+  
Sbjct: 378 QETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNAK- 436

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
            K+   + S AN F      V+CAKASMLLQ+VPPA+L+RFLREHRSEWAD N D YSA+
Sbjct: 437 -KVRNTSTS-ANAF-VTPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSAS 493

Query: 468 AIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
           ++K   CSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG   + +D +M RD+ LL
Sbjct: 494 SLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLL 553

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASA 586
           QLC+G+DE ++G+C +L+FAPID  F DDAPL+ SGFR+IPLD   + +   RTLDLAS+
Sbjct: 554 QLCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAGRTLDLASS 613

Query: 587 LEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVA 646
           LE+G    + T + S +   +RSV+TIAF+F +E H+Q+ VATMARQYVRSI+SSVQRV+
Sbjct: 614 LEVGSTA-QPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVS 672

Query: 647 LALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHH 706
           +A+SPS     AG +   G PEA TLARWIC SY+ +LGV+LL+ + +  E++LK LW +
Sbjct: 673 MAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDY 732

Query: 707 TDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQ 766
            DA++CCS K  PVFTFAN+ GL+MLET+LVALQD++L+KIFD+ GRKAL+ E P++M+Q
Sbjct: 733 EDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQ 792

Query: 767 GFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           G+  L GG+CLS MGR VS+E+AVAWKVL E+   HC+ F F+NWSFV
Sbjct: 793 GYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 840


>sp|Q9AV49|HOX9_ORYSJ Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp.
           japonica GN=HOX9 PE=2 SV=1
          Length = 840

 Score = 1070 bits (2766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/828 (63%), Positives = 643/828 (77%), Gaps = 38/828 (4%)

Query: 13  LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           +D+GKYVRYTPEQVEALER+Y ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNRRCR
Sbjct: 25  MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCR 84

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTS 132
           +KQRKEASRLQAVNRKLTAMNKLLMEEN+RLQKQVSQLV+EN Y +Q  Q+ +L   DTS
Sbjct: 85  DKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLG-NDTS 143

Query: 133 CESVVTSGQHHLTPQHPPRDAS-PAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD 191
           CES VT      TPQ+P RDAS P+GLL+IAEETLTEFLSKATGTAV+WV MPGMKPGPD
Sbjct: 144 CESNVT------TPQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPD 197

Query: 192 SVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI 233
           S GIVA+SHGC GVAARACGLV LEPT++ EILKDRP                   G  I
Sbjct: 198 SFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTI 257

Query: 234 ------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
                 +YA TTL PARDFW LRYT+ +EDGSLVVCERSL     GP+    Q FVRAEM
Sbjct: 258 ELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEM 317

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMA 347
           LPSGYL+RPCEGGGSI+HIVDH+DLE WSVPEVLRPLYESS V+AQK T AALR +RQ+A
Sbjct: 318 LPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIA 377

Query: 348 QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSP 407
           QE +   V   GR+PA LR  SQRLSRGFN+A++GF D+GW+VMG DG++DV +  N+  
Sbjct: 378 QETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNAK- 436

Query: 408 DKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAA 467
            K+   + S AN F      V+CAKASMLLQ+VPPA+L+RFLREHRSEWAD N D YSA+
Sbjct: 437 -KVRNTSTS-ANAF-VTPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSAS 493

Query: 468 AIKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
           ++K   CSLPG R   F GSQ+I+PLAHT+E+EE +EV++LEG   + +D +M RD+ LL
Sbjct: 494 SLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLL 553

Query: 527 QLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASA 586
           QLC+G+DE ++G+C +L+ APID  F DDAPL+ SGFR+IPLD   + +   RTLDLAS+
Sbjct: 554 QLCTGIDEKSMGSCFQLVSAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAGRTLDLASS 613

Query: 587 LEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVA 646
           LE+G    + T + S +   +RSV+TIAF+F +E H+Q+ VATMARQYVRSI+SSVQRV+
Sbjct: 614 LEVGSTA-QPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVS 672

Query: 647 LALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHH 706
           +A+SPS     AG +   G PEA TLARWIC SY+ +LGV+LL+ + +  E++LK LW +
Sbjct: 673 MAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDY 732

Query: 707 TDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQ 766
            DA++CCS K  PVFTFAN+ GL+MLET+LVALQD++L+KIFD+ GRKAL+ E P++M+Q
Sbjct: 733 EDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQ 792

Query: 767 GFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 814
           G+  L GG+CLS MGR VS+E+AVAWKVL E+   HC+ F F+NWSFV
Sbjct: 793 GYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 840


>sp|Q9SE43|REV_ARATH Homeobox-leucine zipper protein REVOLUTA OS=Arabidopsis thaliana
           GN=REV PE=1 SV=2
          Length = 842

 Score = 1051 bits (2718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/837 (64%), Positives = 635/837 (75%), Gaps = 54/837 (6%)

Query: 15  NGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK 74
           +GKYVRYT EQVEALER+Y ECPKPSS+RRQQLIREC IL+NIEPKQIKVWFQNRRCR+K
Sbjct: 23  SGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVWFQNRRCRDK 82

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCE 134
           QRKEASRLQ+VNRKL+AMNKLLMEENDRLQKQVSQLV ENGY +Q     T    D SCE
Sbjct: 83  QRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCENGYMKQQL---TTVVNDPSCE 139

Query: 135 SVVTSGQHHLTPQHPPRDA-SPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSV 193
           SVVT      TPQH  RDA SPAGLLSIAEETL EFLSKATGTAV+WVQMPGMKPGPDSV
Sbjct: 140 SVVT------TPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSV 193

Query: 194 GIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP------------------RGSAI-- 233
           GI AIS  C+GVAARACGLV LEP ++AEILKDRP                   G  I  
Sbjct: 194 GIFAISQRCNGVAARACGLVSLEPMKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIEL 253

Query: 234 ----LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLP 289
                YA TTLAPARDFW LRYT+ L++GS VVCERSL     GP       FVRAEML 
Sbjct: 254 VYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEMLS 313

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQE 349
           SGYLIRPC+GGGSIIHIVDH++LE WSVP+VLRPLYESS V+AQK T++ALR +RQ+AQE
Sbjct: 314 SGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALRYIRQLAQE 373

Query: 350 VTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD- 408
                V G GR+PA LR  SQRLSRGFN+AVNGF D+GW+ M  DG +D+ V +NS+   
Sbjct: 374 SNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIVAINSTKHL 433

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAA 468
             +  +LSF  G       VLCAKASMLLQNVPPA+L+RFLREHRSEWAD N+D YSAA 
Sbjct: 434 NNISNSLSFLGG-------VLCAKASMLLQNVPPAVLIRFLREHRSEWADFNVDAYSAAT 486

Query: 469 IKVGPCSLPGSRVGTF-GSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQ 527
           +K G  + PG R   F GSQ+I+PL HTIEHEE +EV++LEG   + EDA M RD+ LLQ
Sbjct: 487 LKAGSFAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQ 546

Query: 528 LCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKET-----SSPNRTLD 582
           +C+G+DENAVG C+ELIFAPI+  F DDAPL+PSGFR+IP+D+         ++ +RTLD
Sbjct: 547 ICTGIDENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLD 606

Query: 583 LASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSV 642
           L S+LE+GP+   A+ N  ++S+  R ++TIAF+F FE+++QE+VA MA QYVRS+ISSV
Sbjct: 607 LTSSLEVGPSPENASGNSFSSSS-SRCILTIAFQFPFENNLQENVAGMACQYVRSVISSV 665

Query: 643 QRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGS-ESILK 701
           QRVA+A+SPS IS   G +   G+PEA+TLA+WI  SY  +LG +LL   S GS +S+LK
Sbjct: 666 QRVAMAISPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSELLTIDSLGSDDSVLK 725

Query: 702 NLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFP 761
            LW H DA++CCSLK  PVF FANQAGLDMLETTLVALQDITLEKIFD+ GRKA+ ++F 
Sbjct: 726 LLWDHQDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAICSDFA 785

Query: 762 QIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE----TAHCICFMFINWSFV 814
           ++MQQGFACL  GIC+S+MGR VSYE+AVAWKV    E      HC+ F F+NWSFV
Sbjct: 786 KLMQQGFACLPSGICVSTMGRHVSYEQAVAWKVFAASEENNNNLHCLAFSFVNWSFV 842


>sp|O04292|ATBH9_ARATH Homeobox-leucine zipper protein ATHB-9 OS=Arabidopsis thaliana
           GN=ATHB-9 PE=1 SV=1
          Length = 841

 Score = 1043 bits (2698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/851 (61%), Positives = 635/851 (74%), Gaps = 53/851 (6%)

Query: 2   AMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQ 61
           +M  +D      D+GKYVRYTPEQVEALER+Y ECPKPSS+RRQQLIRECPIL NIEP+Q
Sbjct: 6   SMDDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQ 65

Query: 62  IKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHT 121
           IKVWFQNRRCREKQRKE++RLQ VNRKL+AMNKLLMEENDRLQKQVS LVYENG+ +   
Sbjct: 66  IKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVYENGFMKHRI 125

Query: 122 QSTTLATKDTSCESVVTSGQHHL----TPQHPPRDAS-PAGLLSIAEETLTEFLSKATGT 176
            + +  T D SCESVV SGQ       T QHP RD + PA LLSIAEETL EFL KATGT
Sbjct: 126 HTASGTTTDNSCESVVVSGQQRQQQNPTHQHPQRDVNNPANLLSIAEETLAEFLCKATGT 185

Query: 177 AVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRP-------- 228
           AV+WVQM GMKPGPDS+GIVA+S  CSG+AARACGLV LEP +VAEILKDRP        
Sbjct: 186 AVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRPSWFRDCRC 245

Query: 229 ----------RGSAI------LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQN 272
                      G  I      +YA TTLA ARDFW LRY++ LEDGS VVCERSL +   
Sbjct: 246 VETLNVIPTGNGGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATG 305

Query: 273 GPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLA 332
           GP  P    FVRA+ML SG+LIRPC+GGGSIIHIVDH+DL+  SVPEVLRPLYESS +LA
Sbjct: 306 GPNGPLSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILA 365

Query: 333 QKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMG 392
           QK T+AALR +RQ+AQE +       GR+PA LR  SQRL RGFN+AVNGF D+GW+ M 
Sbjct: 366 QKMTVAALRHVRQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMS 425

Query: 393 NDGMDDVTVLVNSSPDKLMGLNLSFANGF-PAVSNAVLCAKASMLLQNVPPAILLRFLRE 451
           +DG +D+T+++NSS  K  G    + + F P+  + VLCAKASMLLQNVPP +L+RFLRE
Sbjct: 426 SDGGEDITIMINSSSAKFAGSQ--YGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLRE 483

Query: 452 HRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGS-QVILPLAHTIEHEEFMEVIKLEGV 510
           HR+EWAD  +D YSAA+++  P ++P  R G F S QVILPLA T+EHEEF+EV++L G 
Sbjct: 484 HRAEWADYGVDAYSAASLRATPYAVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLGGH 543

Query: 511 GHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS 570
            +SPED  + RDM+LLQLCSG+DEN VG CA+L+FAPID SFADDAPLLPSGFR+IPLD 
Sbjct: 544 AYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPLDQ 603

Query: 571 G---KETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHV 627
                +  S +RT DLAS+L+     +  TN+        R V+TIAF+F F++H +++V
Sbjct: 604 KTNPNDHQSASRTRDLASSLDGSTKTDSETNS--------RLVLTIAFQFTFDNHSRDNV 655

Query: 628 ATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVD 687
           ATMARQYVR+++ S+QRVALA++P   S Q  L T   +PEALTL RWI  SY  + G D
Sbjct: 656 ATMARQYVRNVVGSIQRVALAITPRPGSMQ--LPT---SPEALTLVRWITRSYSIHTGAD 710

Query: 688 LLKSSSE--GSESILKNLWHHTDAVMCCSLK--ALPVFTFANQAGLDMLETTLVALQDIT 743
           L  + S+  G +++LK LW H+DA++CCSLK  A PVFTFANQAGLDMLETTLVALQDI 
Sbjct: 711 LFGADSQSCGGDTLLKQLWDHSDAILCCSLKTNASPVFTFANQAGLDMLETTLVALQDIM 770

Query: 744 LEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHC 803
           L+K  DD GR+AL +EF +IMQQG+A L  GIC+SSMGRPVSYE+A  WKV+++ E+ HC
Sbjct: 771 LDKTLDDSGRRALCSEFAKIMQQGYANLPAGICVSSMGRPVSYEQATVWKVVDDNESNHC 830

Query: 804 ICFMFINWSFV 814
           + F  ++WSFV
Sbjct: 831 LAFTLVSWSFV 841


>sp|Q93V99|PDF2_ARATH Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 OS=Arabidopsis
           thaliana GN=PDF2 PE=2 SV=1
          Length = 743

 Score = 85.9 bits (211), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 180/437 (41%), Gaps = 99/437 (22%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DGS  V + SL +++  P+ P     +R    PSG LI+    
Sbjct: 373 LVPTRENYFVRYCKQHSDGSWAVVDVSLDSLR--PSTP----ILRTRRRPSGCLIQELPN 426

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNG- 357
           G S +  ++HM+++  SV  + +PL +S      K  +A L RQ  ++A  +  S++ G 
Sbjct: 427 GYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMA-SNIPGD 485

Query: 358 -------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKL 410
                   GR+  ++  L++R+   F   V   T   WT M   G DDV V+   S D  
Sbjct: 486 LSVITSPEGRK--SMLKLAERMVMSFCSGVGASTAHAWTTMSTTGSDDVRVMTRKSMDD- 542

Query: 411 MGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAA 468
                      P     ++ + A+     V P  +  FLR+   R EW     D+ S   
Sbjct: 543 -----------PGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRKEW-----DILSNGG 586

Query: 469 IKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGV--GHSPEDAIMPRDMFLL 526
           +                   +  +AH     E    + L  V  G+S +      +M +L
Sbjct: 587 M-------------------VQEMAHIANGHEPGNCVSLLRVNSGNSSQS-----NMLIL 622

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSS 576
           Q  C+    +A G+   +I+AP+D             D   LLPSGF I+P  S      
Sbjct: 623 QESCT----DASGSY--VIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGSVG---- 672

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNS--TCMRSVMTIAFEFAFESHMQEHVATMARQY 634
                        G  GN+     ST S  +C  S++T+AF+   +S     ++  +   
Sbjct: 673 -------------GGDGNQHQEMVSTTSSGSCGGSLLTVAFQILVDSVPTAKLSLGSVAT 719

Query: 635 VRSIIS-SVQRVALALS 650
           V S+I  +V+R+  A+S
Sbjct: 720 VNSLIKCTVERIKAAVS 736



 Score = 66.6 bits (161), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ LE  + ECP P   +R++L R+     N+EP Q+K WFQN+R + K +
Sbjct: 65  RYHRHTQRQIQELESFFKECPHPDDKQRKELSRDL----NLEPLQVKFWFQNKRTQMKAQ 120

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
            E       N+ L + N  L  EN+R ++ +S     N
Sbjct: 121 SERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 154


>sp|Q6ZAR0|ROC1_ORYSJ Homeobox-leucine zipper protein ROC1 OS=Oryza sativa subsp.
           japonica GN=ROC1 PE=2 SV=1
          Length = 784

 Score = 76.6 bits (187), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 180/434 (41%), Gaps = 96/434 (22%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P+  PVQ   R    PSG LI+  
Sbjct: 418 SPLVPTRESYFVRYCKNNSDGTWAVVDVSLDSLR--PS--PVQKCRRR---PSGCLIQEM 470

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQSSVN 356
             G S +  V+H++++  SV  + +PL  S      K  +  L RQ  ++A  +  +  N
Sbjct: 471 PNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPN 530

Query: 357 G--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           G         GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 531 GDLGVITSVEGRK--SMLKLAERMVASFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 588

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPPA +  FLR+   RSEW     D+ S 
Sbjct: 589 D------------PGRPPGIVLNAATSFWLPVPPAAVFDFLRDETSRSEW-----DILSN 631

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
                               Q +  +A+  +H   + ++++     +  + ++     L 
Sbjct: 632 GG----------------AVQEMAHIANGRDHGNSVSLLRVNSANSNQSNMLI-----LQ 670

Query: 527 QLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
           + C+    +A G+   +++AP+D             D   LLPSGF I+P          
Sbjct: 671 ESCT----DASGSY--VVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILP---------- 714

Query: 578 NRTLDLASALEIGPAGN-RATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
                       GP+GN +A    + + +   S++T+AF+   +S     ++  +   V 
Sbjct: 715 -----------DGPSGNAQAAVGENGSGSGGGSLLTVAFQILVDSVPTAKLSLGSVATVN 763

Query: 637 SIIS-SVQRVALAL 649
           S+I+ +V+R+  A+
Sbjct: 764 SLIACTVERIKAAV 777



 Score = 66.6 bits (161), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 109 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 164

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E ++L+A N KL A N
Sbjct: 165 HERHENAQLRAENDKLRAEN 184


>sp|Q8RWU4|ATML1_ARATH Homeobox-leucine zipper protein MERISTEM L1 OS=Arabidopsis thaliana
           GN=ATML1 PE=2 SV=1
          Length = 762

 Score = 75.1 bits (183), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 178/437 (40%), Gaps = 86/437 (19%)

Query: 240 LAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEG 299
           L P R+ + +RY     DG   V + SL +++  P         R+   PSG LI+  + 
Sbjct: 382 LVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSP-------ITRSRRRPSGCLIQELQN 434

Query: 300 GGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQ------ 352
           G S +  V+H++++  SV  + +PL  +      K  +A L RQ  ++A  +        
Sbjct: 435 GYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMASNIPACD 494

Query: 353 -SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLM 411
            S +     R + L+ L++R+   F   V   T   WT +   G DDV V+   S D   
Sbjct: 495 LSVITSPEGRKSMLK-LAERMVMSFCTGVGASTAHAWTTLSTTGSDDVRVMTRKSMDD-- 551

Query: 412 GLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSAAAI 469
                     P     ++ + A+     V P  +  FLR+   RSEW     D+ S   +
Sbjct: 552 ----------PGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEW-----DILSNGGL 596

Query: 470 KVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGV--GHSPEDAIMPRDMFLLQ 527
                              +  +AH     +    + L  V  G+S +      +M +LQ
Sbjct: 597 -------------------VQEMAHIANGRDPGNSVSLLRVNSGNSGQS-----NMLILQ 632

Query: 528 -LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSSP 577
             C+    +A G+   +I+AP+D             D   LLPSGF I+P     + S+ 
Sbjct: 633 ESCT----DASGSY--VIYAPVDIIAMNVVLSGGDPDYVALLPSGFAILP-----DGSAR 681

Query: 578 NRTLDLASALEIGPAGNRATNN---YSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQY 634
                  ++   G  G    NN    +T  +C  S++T+AF+   +S     ++  +   
Sbjct: 682 GGGGSANASAGAGVEGGGEGNNLEVVTTTGSCGGSLLTVAFQILVDSVPTAKLSLGSVAT 741

Query: 635 VRSIIS-SVQRVALALS 650
           V S+I  +V+R+  AL+
Sbjct: 742 VNSLIKCTVERIKAALA 758



 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 36/170 (21%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ LE  + ECP P   +R++L RE     ++EP Q+K WFQN+R + K +
Sbjct: 65  RYHRHTQRQIQELESFFKECPHPDDKQRKELSREL----SLEPLQVKFWFQNKRTQMKAQ 120

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N++L  END+L+        EN  ++    + T      +C   
Sbjct: 121 HERHE-----------NQILKSENDKLRA-------ENNRYKDALSNATCP----NCGGP 158

Query: 137 VTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGM 186
              G+     QH          L I    L E + + +  A ++V  P M
Sbjct: 159 AAIGEMSFDEQH----------LRIENARLREEIDRISAIAAKYVGKPLM 198


>sp|Q9LTK3|HDG7_ARATH Homeobox-leucine zipper protein HDG7 OS=Arabidopsis thaliana
           GN=HDG7 PE=2 SV=1
          Length = 682

 Score = 73.2 bits (178), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 146/630 (23%), Positives = 231/630 (36%), Gaps = 129/630 (20%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T  Q++ LE  + ECP P+  +R +L ++      +E KQIK WFQNRR + K   
Sbjct: 61  YHRHTSYQIQELESFFKECPHPNEKQRLELGKKL----TLESKQIKFWFQNRRTQMKTQL 116

Query: 75  QRKEASRLQAVNRKLTAMNKLLMEEN--------------DRLQKQVSQLVYENGYFRQH 120
           +R E   L+  N KL   N  L E                  +  +  QL  EN   ++ 
Sbjct: 117 ERHENVILKQENEKLRLENSFLKESMRGSLCIDCGGAVIPGEVSFEQHQLRIENAKLKEE 176

Query: 121 TQST-TLATK----DTSCESVVTS--GQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKA 173
                 LA +      S E       G  HL   H     +    + +A E + E L  A
Sbjct: 177 LDRICALANRFIGGSISLEQPSNGGIGSQHLPIGHCVSGGTSLMFMDLAMEAMDELLKLA 236

Query: 174 TGTAVEW---VQMPGMK--PGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILK--- 225
                 W    +   M   PG    G+V I+       + A     ++  + AE+ +   
Sbjct: 237 ELETSLWSSKSEKGSMNHFPGSRETGLVLIN-------SLALVETLMDTNKWAEMFECIV 289

Query: 226 -------------DRPRGSAILY------ALTTLAPARDFWLLRYTSVLEDGSLVVCERS 266
                        D  R  +IL        ++ L P +    LRY     DG   V + S
Sbjct: 290 AVASTLEVISNGSDGSRNGSILLMQAEFQVMSPLVPIKQKKFLRYCKQHGDGLWAVVDVS 349

Query: 267 LKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYE 326
             +I  G     ++ +  ++M PSG +I+    G S +  ++H + E      + +PL  
Sbjct: 350 Y-DINRGN--ENLKSYGGSKMFPSGCIIQDIGNGCSKVTWIEHSEYEESHTHSLYQPLLS 406

Query: 327 SSTVLAQKTTMAAL-RQLRQMAQEVTQSSVNGWGRR-PAALRALSQRLSRGFNEAVNGFT 384
           SS  L     +A L RQ       ++     G       ++  L+QR+   F   +    
Sbjct: 407 SSVGLGATKWLATLQRQCESFTMLLSSEDHTGLSHAGTKSILKLAQRMKLNFYSGITASC 466

Query: 385 DEGW-TVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPA 443
              W  ++  +   D  +L   S +                S  VL A  S+ L  V   
Sbjct: 467 IHKWEKLLAENVGQDTRILTRKSLEP---------------SGIVLSAATSLWLP-VTQQ 510

Query: 444 ILLRFLREH--RSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEF 501
            L  FL +   R++W     D+ S  A              +  + +++P       +E 
Sbjct: 511 RLFEFLCDGKCRNQW-----DILSNGA--------------SMENTLLVPKG----QQEG 547

Query: 502 MEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFAD 554
             V  L   G+   ++     M +LQ       N V + A +++AP+D        S  D
Sbjct: 548 SCVSLLRAAGNDQNES----SMLILQ----ETWNDV-SGALVVYAPVDIPSMNTVMSGGD 598

Query: 555 DA--PLLPSGFRIIPLDSGKETSSPNRTLD 582
            A   LLPSGF I+P   G  +SS     D
Sbjct: 599 SAYVALLPSGFSILP--DGSSSSSDQFDTD 626


>sp|A3BPF2|ROC7_ORYSJ Homeobox-leucine zipper protein ROC7 OS=Oryza sativa subsp.
           japonica GN=ROC7 PE=2 SV=1
          Length = 749

 Score = 70.1 bits (170), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 136/360 (37%), Gaps = 72/360 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ---NGPTMPPVQHFVRAEM 287
           SA     + L P R+   LRY     DG+  V + SL  ++    G   P      R   
Sbjct: 375 SAEFQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR- 433

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQ 342
            PSG LI+    G S +  V+H++ +   V  + +P+  S      +  +A L     R 
Sbjct: 434 -PSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERL 492

Query: 343 LRQMAQEVTQSSVNG-----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
              MA  V  S   G      GRR  ++  L++R+   F   V   T   WT +   G +
Sbjct: 493 ASAMASNVASSGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAE 550

Query: 398 DVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSE 455
           DV V+   S D             P     ++   A+     VPP+ +  FLR+   RSE
Sbjct: 551 DVRVMTRKSVDD------------PGRPPGIILNAATSFWLPVPPSRVFDFLRDDSTRSE 598

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           W     D+ S                      V+  +AH     +    + L  V ++  
Sbjct: 599 W-----DILSNGG-------------------VVQEMAHIANGRDHGNAVSLLRVNNANS 634

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRII 566
           +     +M +LQ C     +A G+   +I+AP+D             D   LLPSGF I+
Sbjct: 635 NQ---SNMLILQECC---TDATGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 686



 Score = 65.9 bits (159), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 91  RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 146

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E + L+A N KL A N
Sbjct: 147 HERHENNALRAENEKLRAEN 166


>sp|A2YR02|ROC7_ORYSI Homeobox-leucine zipper protein ROC7 OS=Oryza sativa subsp. indica
           GN=ROC7 PE=3 SV=1
          Length = 749

 Score = 69.7 bits (169), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 136/360 (37%), Gaps = 72/360 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQ---NGPTMPPVQHFVRAEM 287
           SA     + L P R+   LRY     DG+  V + SL  ++    G   P      R   
Sbjct: 375 SAEFQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHRRR- 433

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQ 342
            PSG LI+    G S +  V+H++ +   V  + +P+  S      +  +A L     R 
Sbjct: 434 -PSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERL 492

Query: 343 LRQMAQEVTQSSVNG-----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD 397
              MA  V  S   G      GRR  ++  L++R+   F   V   T   WT +   G +
Sbjct: 493 ASAMASNVASSGDAGVITTSEGRR--SMLKLAERMVASFCGGVTASTTHQWTTLSGSGAE 550

Query: 398 DVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSE 455
           DV V+   S D             P     ++   A+     VPP+ +  FLR+   RSE
Sbjct: 551 DVRVMTRKSVDD------------PGRPPGIVLNAATSFWLPVPPSRVFDFLRDDSTRSE 598

Query: 456 WADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
           W     D+ S                      V+  +AH     +    + L  V ++  
Sbjct: 599 W-----DILSNGG-------------------VVQEMAHIANGRDHGNAVSLLRVNNANS 634

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRII 566
           +     +M +LQ C     +A G+   +I+AP+D             D   LLPSGF I+
Sbjct: 635 NQ---SNMLILQECC---TDATGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAIL 686



 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ LE  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 91  RYHRHTQHQIQELEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKTQ 146

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E + L+A N KL A N
Sbjct: 147 HERHENNALRAENEKLRAEN 166


>sp|Q7Y0V7|ROC6_ORYSJ Homeobox-leucine zipper protein ROC6 OS=Oryza sativa subsp.
           japonica GN=ROC6 PE=2 SV=2
          Length = 872

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 25/132 (18%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE ++ ECP P   +R +L R      N+E +Q+K WFQNRR + KQ 
Sbjct: 125 RYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL----NLESRQVKFWFQNRRTQMKQT 180

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
           +       + R     N LL +END+L+        EN   R+  ++   A    SC   
Sbjct: 181 Q-------IERH---ENALLRQENDKLRA-------ENMTIREAMRNPMCA----SCGGA 219

Query: 137 VTSGQHHLTPQH 148
              G+  L  QH
Sbjct: 220 AVLGEVSLEEQH 231



 Score = 39.3 bits (90), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 14/169 (8%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDG----SLVVCERSLKNIQNGPTMPPVQHFVRAEM 287
           A L  L+ L P R+   LR+     +G      V  +  L+  QNG        ++   +
Sbjct: 462 AELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGGGGSSSSSYMGCRL 521

Query: 288 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQM 346
           LP+G +++    G S +  V H + +  +  ++ RPL  S   L  +  +A+L RQ + +
Sbjct: 522 LPTGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGARRWLASLQRQCQYL 581

Query: 347 AQEVTQS-------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGW 388
           A   + S       ++   GRR  ++  L+QR++  F   V     + W
Sbjct: 582 AILCSNSLPARDHAAITPVGRR--SMLKLAQRMTDNFCAGVCASAAQKW 628


>sp|Q336P2|ROC3_ORYSJ Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp.
           japonica GN=ROC3 PE=2 SV=1
          Length = 882

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 8/104 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           G+    +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR
Sbjct: 131 GNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRR 186

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
            + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 187 TQMKAQQD----RADNVILRAENENLKSDNFRLQAAIRNVVCPN 226



 Score = 42.7 bits (99), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 13/190 (6%)

Query: 237 LTTLAPARDFWLLRY-TSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIR 295
           L+ L  AR+    RY     ++GS  + +   +  + G     V   VR    PSG +I+
Sbjct: 472 LSPLVAAREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASV---VRCRRRPSGCIIQ 528

Query: 296 PCEGGGSIIHIVDHMDL--EPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQ 352
               G S +  V+HM++  E   +  V R    S         ++ L RQ  ++A E+ +
Sbjct: 529 DMPNGYSRVVWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELAR 588

Query: 353 SSVN-GWGRRPAA---LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD--VTVLVNSS 406
           +  + G  R P A   +  LSQR+   F   ++    + WT + +   D   VT   N+ 
Sbjct: 589 NIADLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNTE 648

Query: 407 PDKLMGLNLS 416
           P +  G+ L+
Sbjct: 649 PGQPSGVILT 658


>sp|A2ZAI7|ROC3_ORYSI Homeobox-leucine zipper protein ROC3 OS=Oryza sativa subsp. indica
           GN=ROC3 PE=3 SV=2
          Length = 882

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 8/104 (7%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           G+    +Y R+T  Q++ +E L+ ECP P   +R +L +E      ++P+Q+K WFQNRR
Sbjct: 131 GNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQEL----GLKPRQVKFWFQNRR 186

Query: 71  CREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYEN 114
            + K +++    +A N  L A N+ L  +N RLQ  +  +V  N
Sbjct: 187 TQMKAQQD----RADNVILRAENENLKSDNFRLQAAIRNVVCPN 226



 Score = 42.7 bits (99), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 13/190 (6%)

Query: 237 LTTLAPARDFWLLRY-TSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIR 295
           L+ L  AR+    RY     ++GS  + +   +  + G     V   VR    PSG +I+
Sbjct: 472 LSPLVAAREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASV---VRCRRRPSGCIIQ 528

Query: 296 PCEGGGSIIHIVDHMDL--EPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQEVTQ 352
               G S +  V+HM++  E   +  V R    S         ++ L RQ  ++A E+ +
Sbjct: 529 DMPNGYSRVVWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELAR 588

Query: 353 SSVN-GWGRRPAA---LRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDD--VTVLVNSS 406
           +  + G  R P A   +  LSQR+   F   ++    + WT + +   D   VT   N+ 
Sbjct: 589 NIADLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNTE 648

Query: 407 PDKLMGLNLS 416
           P +  G+ L+
Sbjct: 649 PGQPSGVILT 658


>sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp.
          japonica GN=ROC8 PE=2 SV=2
          Length = 710

 Score = 68.2 bits (165), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
          +Y R+TP Q++ LE ++ ECP P   +R QL RE      +EP+QIK WFQNRR + K  
Sbjct: 18 RYHRHTPRQIQQLEAMFKECPHPDENQRAQLSREL----GLEPRQIKFWFQNRRTQMKAQ 73

Query: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
           +R +   L+A N K+   N  + E
Sbjct: 74 HERADNCFLRAENDKIRCENIAIRE 98



 Score = 50.8 bits (120), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 138/356 (38%), Gaps = 77/356 (21%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERS--LKNIQNGPTMPPVQHFVRAEMLPSG 291
           L+ +T   P R+   +RY   +E G   + + S  L+   +    PP     R+  LPSG
Sbjct: 327 LHIMTPAVPTREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGAPPP-----RSRRLPSG 381

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVL-RPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
            LI     G S +  V+HM++E  S   VL R L  S         +AAL R   + A  
Sbjct: 382 CLIADMANGYSKVTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASL 441

Query: 350 VTQ------SSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLV 403
           V        + V   G+R  ++  LSQR+   F  ++       WT +       V V +
Sbjct: 442 VALGVPHHIAGVTPEGKR--SMMKLSQRMVNSFCSSLGASQMHQWTTLSGSNEVSVRVTM 499

Query: 404 NSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNI 461
           + S D             P   N V+ + A+ +   VP   +  F+R+   RS+W     
Sbjct: 500 HRSTD-------------PGQPNGVVLSAATSIWLPVPCDHVFAFVRDENTRSQW----- 541

Query: 462 DVYSAAAIKVGPCSLP-GSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
           DV S          +P GS  G                     +  L G+  S    ++ 
Sbjct: 542 DVLSHGNQVQEVSRIPNGSNPGNC-------------------ISLLRGLNASQNSMLI- 581

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPIDASFAD---------DAPLLPSGFRIIP 567
               L + C+    +A G+   ++++PID   A+           PLLPSGF I+P
Sbjct: 582 ----LQESCT----DASGSL--VVYSPIDIPAANVVMSGEDPSSIPLLPSGFTILP 627


>sp|Q7Y0V9|ROC4_ORYSJ Homeobox-leucine zipper protein ROC4 OS=Oryza sativa subsp.
           japonica GN=ROC4 PE=2 SV=2
          Length = 813

 Score = 68.2 bits (165), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 15/90 (16%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +EP+Q+K WFQNRR + K +
Sbjct: 107 RYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRL----GLEPRQVKFWFQNRRTQMKMQ 162

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQ 106
            E              N LL +END+L+ +
Sbjct: 163 LERHE-----------NSLLKQENDKLRSE 181



 Score = 53.1 bits (126), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 146/362 (40%), Gaps = 73/362 (20%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI--QNGPTMPPVQHFVRAEMLP 289
           A L  L+ L P R+   LR++  L DG   V + S   +    G T       +    LP
Sbjct: 440 AELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRLP 499

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMA- 347
           SG +++    G   +  V+H + +  SV  + RPL  S   L     +A L RQ   +A 
Sbjct: 500 SGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLAL 559

Query: 348 -------QEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWT----VMGNDGM 396
                   E   S+++  G+R  ++  L++R++  F   V+  +   W+    + GN G 
Sbjct: 560 LMSSIALPENDSSAIHPEGKR--SMLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIG- 616

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RS 454
           +DV V+   S D+            P     V+ + A+ +   V P  L  FL     R+
Sbjct: 617 EDVHVMARKSVDE------------PGTPPGVVLSAATSVWMPVMPERLFNFLHNKGLRA 664

Query: 455 EWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSP 514
           EW     D+ S      GP             Q +  +A   ++   + ++K      SP
Sbjct: 665 EW-----DILSNG----GPM------------QEVTSIAKGQQNGNTVCLLKA-----SP 698

Query: 515 EDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRI 565
                   + L + C+    +A G+   +++AP+D        S  D +   LLPSGF I
Sbjct: 699 TKDKQNSMLILQETCA----DASGSM--VVYAPVDIPAMHLVMSGGDSSCVALLPSGFAI 752

Query: 566 IP 567
           +P
Sbjct: 753 LP 754


>sp|Q94C37|HDG2_ARATH Homeobox-leucine zipper protein HDG2 OS=Arabidopsis thaliana
           GN=HDG2 PE=2 SV=1
          Length = 721

 Score = 67.0 bits (162), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R+QL RE     N+EP Q+K WFQN+R + K  
Sbjct: 67  RYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSREL----NLEPLQVKFWFQNKRTQMKNH 122

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S L+A N KL   N
Sbjct: 123 HERHENSHLRAENEKLRNDN 142



 Score = 67.0 bits (162), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 144/368 (39%), Gaps = 76/368 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           SA     + L P R+ +  RY     DGS  V + SL ++Q     PP +   RA    S
Sbjct: 357 SAEFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQ---PNPPARCRRRA----S 409

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ---- 345
           G LI+    G S +  V+H++++   V  + + +  +      K  +A L RQ  +    
Sbjct: 410 GCLIQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASV 469

Query: 346 MAQEVTQSSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
           MA  ++   V    N  GRR  ++  L++R+   F   V+  T   WT +   G +DV V
Sbjct: 470 MATNISSGEVGVITNQEGRR--SMLKLAERMVISFCAGVSASTAHTWTTLSGTGAEDVRV 527

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S D             P     ++ + A+     VPP  +  FLR+   R+EW   
Sbjct: 528 MTRKSVDD------------PGRPPGIVLSAATSFWIPVPPKRVFDFLRDENSRNEW--- 572

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIM 519
             D+ S                      V+  +AH     +    + L  V  +      
Sbjct: 573 --DILSNGG-------------------VVQEMAHIANGRDTGNCVSLLRVNSANSSQ-- 609

Query: 520 PRDMFLLQ-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLD 569
             +M +LQ  C+        T + +I+AP+D             D   LLPSGF I+P D
Sbjct: 610 -SNMLILQESCTD------PTASFVIYAPVDIVAMNIVLNGGDPDYVALLPSGFAILP-D 661

Query: 570 SGKETSSP 577
               + +P
Sbjct: 662 GNANSGAP 669


>sp|Q6EPF0|ROC5_ORYSJ Homeobox-leucine zipper protein ROC5 OS=Oryza sativa subsp.
           japonica GN=ROC5 PE=2 SV=1
          Length = 804

 Score = 67.0 bits (162), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 26/132 (19%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+TP+Q++ LE L+ ECP P   +R +L R      +++ +Q+K WFQNRR + K +
Sbjct: 101 RYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL----SLDARQVKFWFQNRRTQMKTQ 156

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESV 136
            E              N LL +END+L+        EN   R+  +S        SC S 
Sbjct: 157 LERHE-----------NALLKQENDKLRA-------ENMTIREAMRSPMCG----SCGSP 194

Query: 137 VTSGQHHLTPQH 148
              G+  L  QH
Sbjct: 195 AMLGEVSLEEQH 206



 Score = 53.1 bits (126), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 32/242 (13%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNI--QNGPTMPPVQHFVRAEMLP 289
           A L  L+ L P R+   LR+   L +G+  V + S+  +   +     P    V+   +P
Sbjct: 430 AELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGNVKCRRVP 489

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQ 348
           SG +++    G   +  V+H + +  SV ++ RPL  S      +  +A L RQ   +A 
Sbjct: 490 SGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCECLAI 549

Query: 349 EVTQSSVNG--------WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVM----GNDGM 396
            ++ ++V           G+R  ++  L++R++  F   V+  +   W+ +    G+ G 
Sbjct: 550 LMSSATVTANDSTAISQEGKR--SMLKLARRMTENFCAGVSASSAREWSKLDGATGSIG- 606

Query: 397 DDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RS 454
           +DV V+   S  +            P     V+ + A+ +   V P  L  FLR+   R+
Sbjct: 607 EDVRVMARKSVSE------------PGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRA 654

Query: 455 EW 456
           EW
Sbjct: 655 EW 656


>sp|Q0J9X2|ROC2_ORYSJ Homeobox-leucine zipper protein ROC2 OS=Oryza sativa subsp.
           japonica GN=ROC2 PE=2 SV=1
          Length = 784

 Score = 65.9 bits (159), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T  Q++ +E  + ECP P   +R++L RE      +EP Q+K WFQN+R + K  
Sbjct: 107 RYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKNQ 162

Query: 75  -QRKEASRLQAVNRKLTAMN 93
            +R E S+L++ N KL A N
Sbjct: 163 HERHENSQLRSDNEKLRAEN 182



 Score = 63.2 bits (152), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 168/435 (38%), Gaps = 97/435 (22%)

Query: 238 TTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPC 297
           + L P R+ + +RY     DG+  V + SL +++  P +       +    PSG LI+  
Sbjct: 419 SPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVL-------KCRRRPSGCLIQEM 471

Query: 298 EGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ----MAQEVTQ 352
             G S +  V+H++++  SV  + + L  S      +  +  L RQ  +    MA  +  
Sbjct: 472 PNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPT 531

Query: 353 SSV----NGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           S +    +  GR+  ++  L++R+   F   V       WT +   G +DV V+   S D
Sbjct: 532 SDIGVITSSEGRK--SMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVD 589

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADNNIDVYSA 466
                        P     ++   A+     VPP  +  FLR+   RSEW     D+ S 
Sbjct: 590 D------------PGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEW-----DILSN 632

Query: 467 AAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLL 526
             I                   +  +AH     +    + L  V  S  +      M +L
Sbjct: 633 GGI-------------------VQEMAHIANGRDQGNCVSLLRVNSSNSNQSN---MLIL 670

Query: 527 Q-LCSGMDENAVGTCAELIFAPID---------ASFADDAPLLPSGFRIIPLDSGKETSS 576
           Q  C+    +A G+   +I+AP+D             D   LLPSGF I+P         
Sbjct: 671 QESCT----DASGSY--VIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILP--------- 715

Query: 577 PNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVR 636
                        GPA +    +         S++T+AF+   +S     ++  +   V 
Sbjct: 716 ------------DGPAHDGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVN 763

Query: 637 SIIS-SVQRVALALS 650
           S+I+ +V+R+  A+S
Sbjct: 764 SLIACTVERIKAAVS 778


>sp|Q6ZA74|HOX5_ORYSJ Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp.
           japonica GN=HOX5 PE=1 SV=1
          Length = 349

 Score = 65.1 bits (157), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 21/150 (14%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 86  KKRRLTAEQVQMLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 141

Query: 77  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
           +   +  RL+A    L A +  L+ +NDRL+ QV  L            +  L  K+TS 
Sbjct: 142 QLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISL------------TEKLQDKETSP 189

Query: 134 ES--VVTSGQHHLTPQHPPRDASPAGLLSI 161
            S  + T+ Q    P      AS  G  ++
Sbjct: 190 SSATITTAAQEVDQPDEHTEAASTTGFATV 219


>sp|Q9XH36|HOX5_ORYSI Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica
           GN=HOX5 PE=1 SV=1
          Length = 350

 Score = 65.1 bits (157), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 21/150 (14%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R T EQV+ LER + E  K    R+ +L R       + P+Q+ VWFQNRR R K +
Sbjct: 86  KKRRLTAEQVQMLERSFEEENKLEPERKTELARRL----GMAPRQVAVWFQNRRARWKTK 141

Query: 77  K---EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSC 133
           +   +  RL+A    L A +  L+ +NDRL+ QV  L            +  L  K+TS 
Sbjct: 142 QLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISL------------TEKLQDKETSP 189

Query: 134 ES--VVTSGQHHLTPQHPPRDASPAGLLSI 161
            S  + T+ Q    P      AS  G  ++
Sbjct: 190 SSATITTAAQEVDQPDEHTEAASTTGFATV 219


>sp|Q9FFI0|HDG9_ARATH Homeobox-leucine zipper protein HDG9 OS=Arabidopsis thaliana
           GN=HDG9 PE=2 SV=1
          Length = 718

 Score = 64.7 bits (156), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 8/94 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 77
           Y R+T EQ+  LE  + ECP P   +R+ L  E     N++PKQIK WFQN+R + K   
Sbjct: 30  YHRHTNEQIHRLETYFKECPHPDEFQRRLLGEEL----NLKPKQIKFWFQNKRTQAKSHN 85

Query: 78  EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
           E    +A N  L A N  +  EN+ ++  ++ +V
Sbjct: 86  E----KADNAALRAENIKIRRENESMEDALNNVV 115


>sp|Q9M9P4|HDG8_ARATH Homeobox-leucine zipper protein HDG8 OS=Arabidopsis thaliana
           GN=HDG8 PE=2 SV=2
          Length = 699

 Score = 64.7 bits (156), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 17/92 (18%)

Query: 15  NGKYV--RYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
           NGK    R+TP+Q++ LE  + ECP P   +R QL RE      +EP QIK WFQN+R +
Sbjct: 22  NGKRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCREL----KLEPDQIKFWFQNKRTQ 77

Query: 73  EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQ 104
            K +++ S            N LL  EN+ LQ
Sbjct: 78  SKTQEDRS-----------TNVLLRGENETLQ 98


>sp|Q9FX31|HDG11_ARATH Homeobox-leucine zipper protein HDG11 OS=Arabidopsis thaliana
           GN=HDG11 PE=1 SV=1
          Length = 722

 Score = 64.3 bits (155), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+T +Q++ LE  + ECP P   +R QL RE      + P+QIK WFQNRR + K  
Sbjct: 35  RYHRHTAQQIQRLESSFKECPHPDEKQRNQLSREL----GLAPRQIKFWFQNRRTQLKAQ 90

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R + S L+A N K+   N  + E
Sbjct: 91  HERADNSALKAENDKIRCENIAIRE 115



 Score = 43.1 bits (100), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 139/368 (37%), Gaps = 90/368 (24%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           +  L+ L   R+F  LRY    E GS +V   S         +P      ++   PSG L
Sbjct: 351 MEVLSPLVATREFCELRYCQQTEQGSWIVVNVSYD-------LPQFVSHSQSYRFPSGCL 403

Query: 294 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALR---QLRQMAQEV 350
           I+    G S +  V+H++ E     E++  LY    ++ +     A R    L++M +  
Sbjct: 404 IQDMPNGYSKVTWVEHIETEE---KELVHELYRE--IIHRGIAFGADRWVTTLQRMCERF 458

Query: 351 TQSSVNGWGRR--------PAALRA---LSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDV 399
              SV     R        P   R+   L+QR+   +  +V+   +   TV+       +
Sbjct: 459 ASLSVPASSSRDLGGVILSPEGKRSMMRLAQRMISNYCLSVSRSNNTRSTVVSELNEVGI 518

Query: 400 TVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS--EWA 457
            V  + SP+          NG       VLCA  +  L N P  +   FL++ R+  +W 
Sbjct: 519 RVTAHKSPE---------PNG------TVLCAATTFWLPNSPQNV-FNFLKDERTRPQWD 562

Query: 458 --DNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPE 515
              N   V   A I  G  S PG+ +                      V++     HS  
Sbjct: 563 VLSNGNAVQEVAHISNG--SHPGNCIS---------------------VLRGSNATHS-- 597

Query: 516 DAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDA---------PLLPSGFRII 566
                 +M +LQ     + +   + A ++++P+D +  + A         PLL SGF I 
Sbjct: 598 -----NNMLILQ-----ESSTDSSGAFVVYSPVDLAALNIAMSGEDPSYIPLLSSGFTIS 647

Query: 567 PLDSGKET 574
           P  +G  +
Sbjct: 648 PDGNGSNS 655


>sp|Q6YWR4|HOX16_ORYSJ Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp.
           japonica GN=HOX16 PE=2 SV=1
          Length = 343

 Score = 64.3 bits (155), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 77  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 132

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++  RL+A    L A +  L+++N RL  QV  L 
Sbjct: 133 QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLT 170


>sp|A2X980|HOX16_ORYSI Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica
           GN=HOX16 PE=2 SV=1
          Length = 345

 Score = 64.3 bits (155), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R TPEQV  LER + E  K    R+ +L R+      ++P+Q+ VWFQNRR R K +
Sbjct: 79  KKRRLTPEQVHLLERSFEEENKLEPERKTELARKL----GLQPRQVAVWFQNRRARWKTK 134

Query: 77  ---KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLV 111
              ++  RL+A    L A +  L+++N RL  QV  L 
Sbjct: 135 QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLT 172


>sp|Q9M2E8|HDG1_ARATH Homeobox-leucine zipper protein HDG1 OS=Arabidopsis thaliana
           GN=HDG1 PE=2 SV=1
          Length = 808

 Score = 64.3 bits (155), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 7/85 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
           +Y R+TP+Q++ LE ++ EC  P   +R  L R      N++P+Q+K WFQNRR + K  
Sbjct: 113 RYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRL----NLDPRQVKFWFQNRRTQMKTQ 168

Query: 75  -QRKEASRLQAVNRKLTAMNKLLME 98
            +R E + L+  N KL A N  + E
Sbjct: 169 IERHENALLRQENDKLRAENMSVRE 193



 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 173/448 (38%), Gaps = 105/448 (23%)

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  L+ L P R    LR+     +G   V + S+ +I+ G +            LPSG
Sbjct: 431 AELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS-------CRRLPSG 483

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQ-----M 346
            L++    G S +  ++H + +   +  + RPL            MAAL++  +     M
Sbjct: 484 CLVQDMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILM 543

Query: 347 AQEVTQSS----VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           +  V+ S+    +N  GR+  ++  L++R++  F   V   + + W+ +    +D DV +
Sbjct: 544 SSTVSTSTNPSPINCNGRK--SMLKLAKRMTDNFCGGVCASSLQKWSKLNVGNVDEDVRI 601

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWADN 459
           +   S +             P     ++   A+ +   V P  L  FL     RSEW   
Sbjct: 602 MTRKSVNN------------PGEPPGIILNAATSVWMPVSPRRLFDFLGNERLRSEW--- 646

Query: 460 NIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIE-HEEFMEVIKLEGVGHSPEDAI 518
             D+ S      GP               +  +AH  + H+    V  L     +   + 
Sbjct: 647 --DILSNG----GP---------------MKEMAHIAKGHDRSNSVSLLRASAINANQS- 684

Query: 519 MPRDMFLLQLCSGMDENAVGTCAELIFAPID-------ASFADDA--PLLPSGFRIIPLD 569
               M +LQ  S    +A G  A +++AP+D        +  D A   LLPSGF I+P  
Sbjct: 685 ---SMLILQETS---IDAAG--AVVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILP-- 734

Query: 570 SGKETSSPNRTLDLASALEIGPAGNR----ATNNYSTNSTCMR---SVMTIAFEFAFESH 622
                               G AG +       N   N  CM    S++T+AF+    S 
Sbjct: 735 -------------------NGQAGTQRCAAEERNSIGNGGCMEEGGSLLTVAFQILVNSL 775

Query: 623 MQEHVATMARQYVRSIIS-SVQRVALAL 649
               +   + + V ++IS +VQ++  AL
Sbjct: 776 PTAKLTVESVETVNNLISCTVQKIKAAL 803


>sp|Q9LMT8|HDG12_ARATH Homeobox-leucine zipper protein HDG12 OS=Arabidopsis thaliana
           GN=HDG12 PE=2 SV=1
          Length = 687

 Score = 63.2 bits (152), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 15/88 (17%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           ++ R+TP Q++ LE  ++EC  P   +R QL RE      + P+QIK WFQNRR ++K +
Sbjct: 24  RFHRHTPHQIQRLESTFNECQHPDEKQRNQLSREL----GLAPRQIKFWFQNRRTQKKAQ 79

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQ 104
            E            A N  L EEND+++
Sbjct: 80  HER-----------ADNCALKEENDKIR 96



 Score = 45.8 bits (107), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 140/361 (38%), Gaps = 77/361 (21%)

Query: 234 LYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYL 293
           L  L+ L   R+F +LRY   +E G+  +   S +        P      R+   PSG L
Sbjct: 331 LQVLSPLVTTREFCVLRYCQQIEHGTWAIVNVSYE-------FPQFISQSRSYRFPSGCL 383

Query: 294 IRPCEGGGSIIHIVDHMDLEPWS-VPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQ 352
           I+    G S +  V+H + E    + E+ + +         +  +A L+++ +    + +
Sbjct: 384 IQDMSNGYSKVTWVEHGEFEEQEPIHEMFKDIVHKGLAFGAERWIATLQRMCERFTNLLE 443

Query: 353 ---SSVNGWGRRPA-----ALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVN 404
              SS++  G  P+     ++  L+ R+   F  +V    +   TV+   G+D+  + V 
Sbjct: 444 PATSSLDLGGVIPSPEGKRSIMRLAHRMVSNFCLSVGTSNNTRSTVVS--GLDEFGIRVT 501

Query: 405 SSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRS--EWA--DNN 460
           S   +         NG       VLCA  S  L  + P  +  FL++ R+  +W    N 
Sbjct: 502 SHKSR------HEPNGM------VLCAATSFWLP-ISPQNVFNFLKDERTRPQWDVLSNG 548

Query: 461 IDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMP 520
             V   A I  G  S PG+ +                         L G   S       
Sbjct: 549 NSVQEVAHITNG--SNPGNCISV-----------------------LRGFNASSSQ---- 579

Query: 521 RDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDA---------PLLPSGFRIIPLDSG 571
            +M +LQ  S +D ++    A +I+ P+D    + A         P+LPSGF I P  S 
Sbjct: 580 NNMLILQE-SCIDSSSA---ALVIYTPVDLPALNIAMSGQDTSYIPILPSGFAISPDGSS 635

Query: 572 K 572
           K
Sbjct: 636 K 636


>sp|Q9ZV65|HDG3_ARATH Homeobox-leucine zipper protein HDG3 OS=Arabidopsis thaliana
           GN=HDG3 PE=2 SV=2
          Length = 725

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 8/93 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           KY R+T  Q+  +E  + ECP P   +R  L  +      ++P QIK WFQN+R + K +
Sbjct: 71  KYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQL----GLDPVQIKFWFQNKRTQNKNQ 126

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQ 109
           +E  R +  N +L  +N  L  EN RL++ + Q
Sbjct: 127 QE--RFE--NSELRNLNNHLRSENQRLREAIHQ 155



 Score = 41.2 bits (95), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 82/408 (20%), Positives = 156/408 (38%), Gaps = 85/408 (20%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           SA    L+ L   R+ + +RY     +G   V + S+ ++     +P +   ++    PS
Sbjct: 364 SAEYQVLSPLVTTRESYFVRYCKQQGEGLWAVVDISIDHL-----LPNIN--LKCRRRPS 416

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
           G LI+    G S +  V+H++++      +   L  +    A    +  L RQ  +++  
Sbjct: 417 GCLIQEMHSGYSKVTWVEHVEVDDAGSYSIFEKLICTGQAFAANRWVGTLVRQCERISSI 476

Query: 350 VT---QSSVNG-----WGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
           ++   QS  +G           ++  +++R++R F   +   T  G T+      +D+ V
Sbjct: 477 LSTDFQSVDSGDHITLTNHGKMSMLKIAERIARTFFAGMTNAT--GSTIFSGVEGEDIRV 534

Query: 402 LVNSS---PDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLRE--HRSEW 456
           +   S   P K  G+              ++CA  S  L   PP  +  FLRE  HR  W
Sbjct: 535 MTMKSVNDPGKPPGV--------------IICAATSFWLP-APPNTVFDFLREATHRHNW 579

Query: 457 ADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPED 516
                DV     +                   I  + + I+      +++    GH+ + 
Sbjct: 580 -----DVLCNGEMM----------------HKIAEITNGIDKRNCASLLRH---GHTSKS 615

Query: 517 AIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDA----------PLLPSGFRII 566
            +M     ++Q  S        T + +++AP+D +  D             +LPSGF I 
Sbjct: 616 KMM-----IVQETS-----TDPTASFVLYAPVDMTSMDITLHGGGDPDFVVILPSGFAIF 665

Query: 567 PLDSGKETSSPNR---TLDLASALEIGPAGNRATNNYSTNSTCMRSVM 611
           P  +GK          T+     +E GP    + ++ +T    +R+ +
Sbjct: 666 PDGTGKPGGKEGGSLLTISFQMLVESGPEARLSVSSVATTENLIRTTV 713


>sp|P46607|HGL2_ARATH Homeobox-leucine zipper protein GLABRA 2 OS=Arabidopsis thaliana
           GN=GL2 PE=2 SV=3
          Length = 747

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 7/92 (7%)

Query: 10  TGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 69
           T      KY R+T +Q+  +E L+ E P P   +RQQL ++      + P+Q+K WFQNR
Sbjct: 97  TNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQL----GLAPRQVKFWFQNR 152

Query: 70  RCREK---QRKEASRLQAVNRKLTAMNKLLME 98
           R + K   +R E S L+A   KL   NK + E
Sbjct: 153 RTQIKAIQERHENSLLKAELEKLREENKAMRE 184



 Score = 51.2 bits (121), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 143/352 (40%), Gaps = 73/352 (20%)

Query: 237 LTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRP 296
           LT + P R+ + +R    L      + + S+ ++++  T       ++   LPSG +I  
Sbjct: 379 LTPVVPTREVYFVRSCRQLSPEKWAIVDVSV-SVEDSNTEKEAS-LLKCRKLPSGCIIED 436

Query: 297 CEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQMAQEV- 350
              G S +  V+H+D+   +V  + R L  +      +  +A L     R +  MA  V 
Sbjct: 437 TSNGHSKVTWVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVP 496

Query: 351 TQSS--VNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPD 408
           T+ S  V     R + L+ ++QR+++ F  A+   +   WT +      D+ V   SS  
Sbjct: 497 TKDSLGVTTLAGRKSVLK-MAQRMTQSFYRAIAASSYHQWTKITTKTGQDMRV---SSRK 552

Query: 409 KLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEWA--DNNIDVY 464
            L         G P  +  ++CA +S+ L  V PA+L  F R+   R EW    N   V 
Sbjct: 553 NLHD------PGEP--TGVIVCASSSLWLP-VSPALLFDFFRDEARRHEWDALSNGAHVQ 603

Query: 465 SAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMF 524
           S A +  G            G+ V +    T++  E                    + ++
Sbjct: 604 SIANLSKGQ---------DRGNSVAI---QTVKSRE--------------------KSIW 631

Query: 525 LLQLCSGMDENAVGTCAELIFAPIDAS-----FADDAP----LLPSGFRIIP 567
           +LQ  S     +V     +++AP+D +      A   P    +LPSGF IIP
Sbjct: 632 VLQDSSTNSYESV-----VVYAPVDINTTQLVLAGHDPSNIQILPSGFSIIP 678


>sp|Q0WV12|ANL2_ARATH Homeobox-leucine zipper protein ANTHOCYANINLESS 2 OS=Arabidopsis
           thaliana GN=ANL2 PE=2 SV=1
          Length = 802

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 9/86 (10%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 137 RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191

Query: 75  --QRKEASRLQAVNRKLTAMNKLLME 98
             +R E + L+  N KL A N  + E
Sbjct: 192 QLERHENALLRQENDKLRAENMSIRE 217



 Score = 50.4 bits (119), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 30/237 (12%)

Query: 231 SAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPS 290
           +A L  L+ L P R+   LR+     +G   V + S+  ++      PV        LPS
Sbjct: 433 NAELQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSGGAPV-----IRRLPS 487

Query: 291 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQMAQE 349
           G +++    G S +  V+H + +   + ++ RPL  S      +  +A L RQ   +A  
Sbjct: 488 GCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAIL 547

Query: 350 VTQS-------SVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMD-DVTV 401
           ++ S       S+   GR+  ++  L+QR++  F   ++  +   W+ +    +D DV V
Sbjct: 548 ISSSVTSHDNTSITPGGRK--SMLKLAQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVRV 605

Query: 402 LVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREH--RSEW 456
           +   S D             P     ++ + A+ +     P  L  FLR    R EW
Sbjct: 606 MTRKSVDD------------PGEPPGIVLSAATSVWLPAAPQRLYDFLRNERMRCEW 650


>sp|Q9S9Z0|HDG10_ARATH Homeobox-leucine zipper protein HDG10 OS=Arabidopsis thaliana
          GN=HDG10 PE=2 SV=1
          Length = 708

 Score = 56.6 bits (135), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 7/87 (8%)

Query: 13 LDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
          +D+     ++  QV+ LE  +HECP P   +R+QL  E     N++ KQIK WFQNRR +
Sbjct: 15 IDSNNRRHHSNHQVQRLEAFFHECPHPDDSQRRQLGNEL----NLKHKQIKFWFQNRRTQ 70

Query: 73 EKQRKEASR---LQAVNRKLTAMNKLL 96
           +   E +    L+  N K+  +N+ +
Sbjct: 71 ARIHNEKADNIALRVENMKIRCVNEAM 97


>sp|Q8LFD3|ATB23_ARATH Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana
           GN=ATHB-23 PE=2 SV=1
          Length = 255

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQ++ALE+ +    K  S R+ +L R       ++P+QI +WFQNRR
Sbjct: 65  GSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARAL----GLQPRQIAIWFQNRR 120

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
            R K ++       + R+  ++   N++L  +N +LQ QV  L
Sbjct: 121 ARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMAL 163


>sp|Q9FJS2|HDG5_ARATH Homeobox-leucine zipper protein HDG5 OS=Arabidopsis thaliana
           GN=HDG5 PE=2 SV=3
          Length = 826

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           +Y R+T  Q++ +E L+ E P P   +R++L  E      ++P+Q+K WFQNRR + K +
Sbjct: 114 RYHRHTNRQIQEMEALFKENPHPDDKQRKRLSAEL----GLKPRQVKFWFQNRRTQMKAQ 169

Query: 77  KEASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
           ++ +     N  L A N  L  EN  LQ ++
Sbjct: 170 QDRNE----NVMLRAENDNLKSENCHLQAEL 196



 Score = 41.6 bits (96), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 9/177 (5%)

Query: 232 AILYALTTLAPARDFWLLRYTSV-LEDGSLVVCERSLKNIQNGPTMPPVQHFVRA-EMLP 289
           A L  L+ L P R+ + LRY     E G+  + +  + +  +   M P+       +  P
Sbjct: 441 AELQVLSPLVPTREAYFLRYVEQNAETGNWAIVDFPIDSFHD--QMQPMNTITHEYKRKP 498

Query: 290 SGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-RQLRQ--- 345
           SG +I+    G S +  V+H++++   V E      +S         +  L RQ  +   
Sbjct: 499 SGCIIQDMPNGYSQVKWVEHVEVDEKHVHETFAEYVKSGMAFGANRWLDVLQRQCERIAS 558

Query: 346 -MAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTV 401
            MA+ +T   V         +  LSQRL + F   ++    + WT +     D V +
Sbjct: 559 LMARNITDLGVISSAEARRNIMRLSQRLVKTFCVNISTAYGQSWTALSETTKDTVRI 615


>sp|A3BYC1|HOX25_ORYSJ Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp.
           japonica GN=HOX25 PE=2 SV=2
          Length = 320

 Score = 54.3 bits (129), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 8/105 (7%)

Query: 7   DGKTGSLDNGKYVRYTPEQVEALERLYHECP-KPSSIRRQQLIRECPILSNIEPKQIKVW 65
           D +  S    +  R T EQV ALER + E   K    R+ +L R       I P+Q+ VW
Sbjct: 72  DEQGSSSAAARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRL----GIAPRQVAVW 127

Query: 66  FQNRRCREKQRK---EASRLQAVNRKLTAMNKLLMEENDRLQKQV 107
           FQNRR R K ++   +  RL+A + +L A    L  +N+ L+ QV
Sbjct: 128 FQNRRARWKTKQLELDFDRLRAAHDELLAGRTALAADNESLRSQV 172


>sp|Q8S7W9|HOX21_ORYSJ Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp.
           japonica GN=HOX21 PE=2 SV=1
          Length = 366

 Score = 53.9 bits (128), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR
Sbjct: 124 GSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRR 179

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
            R K ++      A+ R+L A+   N  L+  N +LQ ++  L
Sbjct: 180 ARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVAL 222


>sp|A2XD08|HOX21_ORYSI Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica
           GN=HOX21 PE=2 SV=2
          Length = 360

 Score = 53.5 bits (127), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)

Query: 11  GSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRR 70
           GS    K  R   EQV  LE+ +    K    R+ QL R       ++P+Q+ +WFQNRR
Sbjct: 118 GSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL----GLQPRQVAIWFQNRR 173

Query: 71  CREKQRKEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
            R K ++      A+ R+L A+   N  L+  N +LQ ++  L
Sbjct: 174 ARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVAL 216


>sp|Q5JMF3|ROC9_ORYSJ Homeobox-leucine zipper protein ROC9 OS=Oryza sativa subsp.
           japonica GN=ROC9 PE=2 SV=1
          Length = 816

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 18  YVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
           Y R+T EQ+  +E L+ E P P   +RQQ+ ++      +  +Q+K WFQNRR + K   
Sbjct: 99  YHRHTAEQIRIMEALFKESPHPDERQRQQVSKQL----GLSARQVKFWFQNRRTQIKAVQ 154

Query: 75  QRKEASRLQAVNRKLTAMNKLLME 98
           +R E S L++   KL   ++ + E
Sbjct: 155 ERHENSLLKSELEKLQDEHRAMRE 178



 Score = 35.0 bits (79), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 99/286 (34%), Gaps = 62/286 (21%)

Query: 158 LLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPD------SVGIVAISHGCSG------- 204
           +L +A   L E +   +     WV+  G++ G D       V +    HG SG       
Sbjct: 309 ILELATRALDELVGMCSSGEPVWVR--GVETGRDILNYDEYVRLFRRDHGGSGDQMAGWT 366

Query: 205 -VAARACGLVGLE------------------PTRVA-----EILKDRPRGS--------- 231
             A+R CGLV L+                  PT ++     E++ +R             
Sbjct: 367 VEASRECGLVYLDTMHLVHTFMDVDKWKDLFPTMISKAATLEMISNREDDGRDGVLQLMY 426

Query: 232 AILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSG 291
           A L  LT + P R+ +  RY   L      + + S    + G         VR    PSG
Sbjct: 427 AELQTLTPMVPTRELYFARYCKKLAAERWAIVDVSFDESETGVH---ASSAVRCWKNPSG 483

Query: 292 YLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAAL-----RQLRQM 346
            LI     G   +  V+H      +V  + R +  S      +  +AAL     R +  +
Sbjct: 484 CLIEEQNNGRCKMTWVEHTRCRRCTVAPLYRAVTASGVAFGARRWVAALQLQCERMVFAV 543

Query: 347 AQEVTQSSVNG----WGRRPAALRALSQRLSRGFNEAVNGFTDEGW 388
           A  V      G     GRR  ++  L+ R++        G  D  W
Sbjct: 544 ATNVPTRDSTGVSTLAGRR--SVLKLAHRMTSSLCRTTGGSCDMAW 587


>sp|P46897|ATHB7_ARATH Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana
           GN=ATHB-7 PE=2 SV=2
          Length = 258

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 3   MSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQI 62
           ++ K  K  + +     R++ EQ+++LE ++    +    ++ QL RE      ++P+Q+
Sbjct: 18  LTMKKMKKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLAREL----GLQPRQV 73

Query: 63  KVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQ 122
            +WFQN+R R K ++  +    + +        L  + + L+K+   LV E    ++ TQ
Sbjct: 74  AIWFQNKRARWKSKQLETEYNILRQNYDN----LASQFESLKKEKQALVSELQRLKEATQ 129

Query: 123 STTLATKDTSCES----VVTSGQHHLTPQHPPRDASP 155
             T   ++  C      V  S  HH +     R   P
Sbjct: 130 KKT-QEEERQCSGDQAVVALSSTHHESENEENRRRKP 165


>sp|Q94GL5|HOX23_ORYSJ Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp.
           japonica GN=HOX23 PE=2 SV=1
          Length = 351

 Score = 51.2 bits (121), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 76
           K  R + EQV  LER +    K    R+ QL R       ++P+Q+ +WFQNRR R K +
Sbjct: 104 KKRRLSVEQVRTLERSFESGNKLEPERKAQLARAL----GLQPRQVAIWFQNRRARWKTK 159

Query: 77  KEASRLQAVNRKLTAM---NKLLMEENDRLQKQVSQL 110
           +      A+ R+L A    N  L+  N +L  ++  L
Sbjct: 160 QLEKDFDALRRQLDAARAENDALLSLNSKLHAEIVAL 196


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.133    0.398 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 296,513,190
Number of Sequences: 539616
Number of extensions: 12360680
Number of successful extensions: 33558
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 711
Number of HSP's that attempted gapping in prelim test: 32807
Number of HSP's gapped (non-prelim): 1063
length of query: 814
length of database: 191,569,459
effective HSP length: 126
effective length of query: 688
effective length of database: 123,577,843
effective search space: 85021555984
effective search space used: 85021555984
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)